BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005966
(667 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/651 (56%), Positives = 484/651 (74%), Gaps = 6/651 (0%)
Query: 19 LVQQYAATKSIAGTKQLHAFIITSGPLFTHLRSSLVRAY---GHVSNVRILFDEMSERSS 75
L+ +AAT+SI+ TK LH +IT G + H+ S+L Y GH++ R LF+EM + S
Sbjct: 21 LLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSL 80
Query: 76 FLYNTVMKMYAQNGASHDSLKMFLGMLRLG-EYNPDNYTYPIVIKACTDLAWRKLGIALH 134
YN V++MY + G HD++ +F+ M+ G + PD YTYP V KA +L KLG+ +H
Sbjct: 81 LSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVH 140
Query: 135 GRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAK 194
GR+L + F D +V N L+AMYMNFG+V+ AR VFD M V+SWNT+ISGY++N Y
Sbjct: 141 GRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMN 200
Query: 195 EALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALV 254
+AL++FDWM+ V+ D A++VS+LP CG+LK++EMGR +H+LV RLG I NALV
Sbjct: 201 DALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALV 260
Query: 255 DMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSL 314
+MY+KCG ++EAR VFDRM RDV+TWT MINGY +GDV NAL L +LMQFEGVRPN++
Sbjct: 261 NMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAV 320
Query: 315 TIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFART 374
TI SL+S C + G+ LH W ++Q + ++I+ET+LI MYAKC V L F+VF+
Sbjct: 321 TIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGA 380
Query: 375 SKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAM 434
SK T PW+AI+AGCV N L A+ LF++M E VEPN ATLNSLLPAYA LADL+QAM
Sbjct: 381 SKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAM 440
Query: 435 NIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPI--KDKDIVVWSVIIAGY 492
NIHCYL + GF+S ++ +TGL+ +YSKCG+LESAHKIF+ I K KD+V+W +I+GY
Sbjct: 441 NIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGY 500
Query: 493 GMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSR 552
GMHG G A+ +F EMV+SGV PNE+TFTSAL+ACSH GL++EGL LF FMLE+++T +R
Sbjct: 501 GMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLAR 560
Query: 553 ADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLF 612
++HYTCIVDLLGRAGRLDEAY+LI T+P +PT VWGALL ACV H NV+LGE+AA LF
Sbjct: 561 SNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLF 620
Query: 613 ELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVRN 663
ELEPEN GNYVLL+ +Y+A+ RWKD E VR +M+ GLRK P HS IE+R+
Sbjct: 621 ELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRS 671
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 418 NSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPI 477
SLL +A + + +HC++I G +S +ST L Y+ CG + A K+F E+P
Sbjct: 19 QSLLNHFAATQSISKTKALHCHVITGGRVSGHILST-LSVTYALCGHITYARKLFEEMP- 76
Query: 478 KDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQ--PNEVTF 520
++ ++++I Y G A+S+F MV GV+ P+ T+
Sbjct: 77 -QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTY 120
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 479 bits (1234), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/666 (38%), Positives = 390/666 (58%), Gaps = 14/666 (2%)
Query: 10 PKTTHLVIKLVQQYAATKSIAGTKQLHAFIITSGPLF-THLRSSLVRAY---GHVSNVRI 65
P+T V++L A +KS+ K++ FI +G + ++L S L Y G +
Sbjct: 94 PRTLCSVLQLC---ADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 66 LFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLA 125
+FDE+ + +N +M A++G S+ +F M+ G D+YT+ V K+ + L
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG-VEMDSYTFSCVSKSFSSLR 209
Query: 126 WRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLIS 185
G LHG +L +GF VGN L+A Y+ V +ARKVFD M E V+SWN++I+
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 186 GYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGK 245
GY N A++ L VF ML SG+E D A++VSV C + I +GR +H + +
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 246 NIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQ 305
N L+DMY KCG ++ A+ VF MS+R VV++TSMI GYA G A+ LF+ M+
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 306 FEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVK 365
EG+ P+ T+ ++L+ C+ L G+ +H W + +L ++ V AL+DMYAKC ++
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 449
Query: 366 LSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEV-VEPNDATLNSLLPAY 424
+ VF+ K + WN I+ G N A +A+ LF +L E P++ T+ +LPA
Sbjct: 450 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 509
Query: 425 AILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVV 484
A L+ + IH Y++R G+ S V+ L+D+Y+KCG+L AH +F +I KD+V
Sbjct: 510 ASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA--SKDLVS 567
Query: 485 WSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFML 544
W+V+IAGYGMHG G+ A++LF +M Q+G++ +E++F S L+ACSH GL+DEG FN M
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 545 ENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELG 604
+ +HY CIVD+L R G L +AY I MP+ P +WGALL C IH +V+L
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 687
Query: 605 EVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVR-- 662
E A+ +FELEPEN G YVL++ +Y+ +W+ + +R + ++GLRK P S IE++
Sbjct: 688 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 747
Query: 663 -NILTA 667
NI A
Sbjct: 748 VNIFVA 753
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 154/530 (29%), Positives = 268/530 (50%), Gaps = 10/530 (1%)
Query: 72 ERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGI 131
+RS NT ++ + ++G +++K+ + G+++ D T V++ C D K G
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKL---LCVSGKWDIDPRTLCSVLQLCADSKSLKDGK 114
Query: 132 ALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNA 191
+ + GF +D+ +G+ L MY N G++K A +VFD + + WN L++ K+
Sbjct: 115 EVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG 174
Query: 192 YAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWN 251
++ +F M+ SGVE D + V + L+ + G +H + G+ + N
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGN 234
Query: 252 ALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRP 311
+LV Y+K V+ AR VFD M+ERDV++W S+INGY NG L +F M G+
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294
Query: 312 NSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVF 371
+ TI S+ + C+ + GR++H+ +K E L+DMY+KC + + VF
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 372 ARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQ 431
S + V + +++AG GLA +AV+LF +M E + P+ T+ ++L A L
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 432 QAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAG 491
+ +H ++ + VS L+D+Y+KCGS++ A +FSE+ + KDI+ W+ II G
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV--KDIISWNTIIGG 472
Query: 492 YGMHGHGETAVSLFKEMVQSG-VQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTC 550
Y + + A+SLF +++ P+E T L AC+ D+G ++ +++ N
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 551 SRADHY-TCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHG 599
R H +VD+ + G L A+ L + K W ++ +HG
Sbjct: 533 DR--HVANSLVDMYAKCGALLLAHMLFDDIASKDL-VSWTVMIAGYGMHG 579
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 251/673 (37%), Positives = 377/673 (56%), Gaps = 14/673 (2%)
Query: 2 NGPSHHT--LPKTTHLVIKLVQQYAA-----TKSIAGTKQLHAFIITSGPLFTHLRS--- 51
N PS H L + ++ + + AA S+ +Q+ + +G H
Sbjct: 16 NPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKL 75
Query: 52 -SLVRAYGHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPD 110
SL YG V +F+ + + + LY+T++K +A+ +L+ F+ M R + P
Sbjct: 76 VSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRM-RYDDVEPV 134
Query: 111 NYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFD 170
Y + ++K C D A ++G +HG ++ +GF +D F L MY +V ARKVFD
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 171 AMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEM 230
M E +VSWNT+++GY +N A+ AL + M + ++P ++VSVLPA L+ I +
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 231 GRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYAL 290
G+ IH + ALVDMY KCGS+ AR +FD M ER+VV+W SMI+ Y
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 291 NGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIV 350
N + + A+ +FQ M EGV+P +++ L AC+ L L+RGR +H +++ L+ V V
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 351 ETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVV 410
+LI MY KC V + +F + + V WNA++ G NG A+ F QM V
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 411 EPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHK 470
+P+ T S++ A A L+ A IH ++R V V+T L+D+Y+KCG++ A
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 471 IFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHG 530
IF + ++ + W+ +I GYG HG G+ A+ LF+EM + ++PN VTF S + ACSH
Sbjct: 495 IFDM--MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
Query: 531 GLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGA 590
GL++ GL F M EN+ DHY +VDLLGRAGRL+EA+D I MP+KP V+GA
Sbjct: 553 GLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 612
Query: 591 LLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGL 650
+LGAC IH NV E AA+ LFEL P++ G +VLL+ +Y A W+ VR M +GL
Sbjct: 613 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 651 RKAPAHSLIEVRN 663
RK P S++E++N
Sbjct: 673 RKTPGCSMVEIKN 685
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 434 bits (1117), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/612 (37%), Positives = 364/612 (59%), Gaps = 7/612 (1%)
Query: 55 RAYGHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTY 114
R + + R +F EM++RS + +NT++K ++ + L F M R E PDN+T
Sbjct: 5 RKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFR-DEEKPDNFTL 63
Query: 115 PIVIKACTDLAWRKLGIALHGRVLI-TGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMW 173
P+ +KAC +L G +HG V D +VG+ LI MY+ G + A ++FD +
Sbjct: 64 PVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE 123
Query: 174 EHSVVSWNTLISGYFKNAYAKEALVVFDWM-LKSGVEPDCASVVSVLPACGYLKEIEMGR 232
+ +V+W++++SG+ KN +A+ F M + S V PD ++++++ AC L +GR
Sbjct: 124 KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 183
Query: 233 MIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNG 292
+H V +++ N+L++ Y K + EA +F ++E+DV++W+++I Y NG
Sbjct: 184 CVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 293 DVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVET 352
AL +F M +G PN T+ +L AC++ + L++GR H I++ LE EV V T
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVST 303
Query: 353 ALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEV-VE 411
AL+DMY KC + ++ VF+R +K V W A+++G NG+A +++E F ML+E
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR 363
Query: 412 PNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKI 471
P+ + +L + + L L+QA H Y+I+YGF S + L+++YS+CGSL +A K+
Sbjct: 364 PDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKV 423
Query: 472 FSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSG-VQPNEVTFTSALHACSHG 530
F+ I +KD VVW+ +I GYG+HG G A+ F MV+S V+PNEVTF S L ACSH
Sbjct: 424 FNGIALKD--TVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHA 481
Query: 531 GLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGA 590
GL+ EGL +F M+ +++ +HY +VDLLGR G LD A ++ + MP PT + G
Sbjct: 482 GLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGT 541
Query: 591 LLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGL 650
LLGAC IH N E+ E AK LFELE + G Y+L+S +Y W++ E +R+ + ++G+
Sbjct: 542 LLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGI 601
Query: 651 RKAPAHSLIEVR 662
+K A SLIE+R
Sbjct: 602 KKGLAESLIEIR 613
Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/515 (28%), Positives = 267/515 (51%), Gaps = 16/515 (3%)
Query: 4 PSHHTLPKTTHLVIKLVQQYAATKSIAGTKQLHAFIITSGPLFTHLR--SSLVRAY---G 58
P + TLP ++ + + + +H F+ L + L SSL+ Y G
Sbjct: 58 PDNFTLPVA-------LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCG 110
Query: 59 HVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVI 118
+ +FDE+ + +++++ + +NG+ + +++ F M+ + PD T ++
Sbjct: 111 RMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLV 170
Query: 119 KACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVV 178
ACT L+ +LG +HG V+ GF D + N L+ Y K A +F + E V+
Sbjct: 171 SACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVI 230
Query: 179 SWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELV 238
SW+T+I+ Y +N A EAL+VF+ M+ G EP+ A+V+ VL AC ++E GR HEL
Sbjct: 231 SWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELA 290
Query: 239 AGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNAL 298
L + ALVDMY+KC S EA VF R+ +DVV+W ++I+G+ LNG ++
Sbjct: 291 IRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSI 350
Query: 299 GLFQLMQFE-GVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDM 357
F +M E RP+++ + +L +CS L +L++ + H++ IK + + +L+++
Sbjct: 351 EEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVEL 410
Query: 358 YAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEV-VEPNDAT 416
Y++C + + +VF + K TV W +++ G +G KA+E F M+ V+PN+ T
Sbjct: 411 YSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVT 470
Query: 417 LNSLLPAYAILADLQQAMNIHCYLIR-YGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEI 475
S+L A + + + + I ++ Y +E L+D+ + G L++A +I +
Sbjct: 471 FLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM 530
Query: 476 PIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQ 510
P ++ ++ +H +GE A ++ K++ +
Sbjct: 531 PFSPTPQIL-GTLLGACRIHQNGEMAETVAKKLFE 564
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 255/687 (37%), Positives = 375/687 (54%), Gaps = 56/687 (8%)
Query: 27 KSIAGTKQLHAFIITSGPLFTHLRSSLVRAY---GHVSNVRILFDEM--SERSSFLYNTV 81
K+I+ K +H +++ G L +L S L+ Y G +S+ L S+ + +N++
Sbjct: 39 KTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSL 98
Query: 82 MKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITG 141
++ Y NG ++ L +F G++ + PDNYT+P V KAC +++ + G + H L+TG
Sbjct: 99 IRSYGDNGCANKCLYLF-GLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 142 FDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFD 201
F + FVGN L+AMY + ARKVFD M VVSWN++I Y K K AL +F
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 202 WMLKS-GVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKC 260
M G PD ++V+VLP C L +G+ +H + +N+ N LVDMY KC
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 261 GSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFE------------- 307
G ++EA VF MS +DVV+W +M+ GY+ G +A+ LF+ MQ E
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 308 ----------------------GVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLE 345
G++PN +T+ S+LS C+S+ L G+ +H + IK ++
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 346 C-------EVIVETALIDMYAKCNLVKLSFQVFARTSKKK--TVPWNAILAGCVHNGLAR 396
E +V LIDMYAKC V + +F S K+ V W ++ G +G A
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 397 KAVELFRQMLVEVVE--PNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSV-VEVST 453
KA+EL +M E + PN T++ L A A LA L+ IH Y +R +V + VS
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN 517
Query: 454 GLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGV 513
LID+Y+KCGS+ A +F + K++ V W+ ++ GYGMHG+GE A+ +F EM + G
Sbjct: 518 CLIDMYAKCGSISDARLVFDNMMAKNE--VTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575
Query: 514 QPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAY 573
+ + VT L+ACSH G++D+G++ FN M +HY C+VDLLGRAGRL+ A
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAAL 635
Query: 574 DLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVR 633
LI MP++P VW A L C IHG VELGE AA+ + EL + G+Y LLS LY+
Sbjct: 636 RLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAG 695
Query: 634 RWKDAENVRDVMDEKGLRKAPAHSLIE 660
RWKD +R +M KG++K P S +E
Sbjct: 696 RWKDVTRIRSLMRHKGVKKRPGCSWVE 722
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/648 (35%), Positives = 373/648 (57%), Gaps = 8/648 (1%)
Query: 19 LVQQYAATKSIAGTKQLHAFIITSG-PLFTHLRSSLVRAY---GHVSNVRILFDEMSERS 74
LV+ A K+ G L + + G + SSL++AY G + LFD + ++
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 75 SFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALH 134
++N ++ YA+ GA +K F ++R+ + +P+ T+ V+ C LG+ LH
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGF-SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLH 262
Query: 135 GRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAK 194
G V+++G D + + N L++MY G A K+F M V+WN +ISGY ++ +
Sbjct: 263 GLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLME 322
Query: 195 EALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALV 254
E+L F M+ SGV PD + S+LP+ + +E + IH + + +I +AL+
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 255 DMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSL 314
D Y KC V+ A+ +F + + DVV +T+MI+GY NG ++L +F+ + + PN +
Sbjct: 383 DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442
Query: 315 TIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFART 374
T+ S+L L LK GR LH + IK+ + + A+IDMYAKC + L++++F R
Sbjct: 443 TLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Query: 375 SKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAM 434
SK+ V WN+++ C + A+++FRQM V + + ++++ L A A L
Sbjct: 503 SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGK 562
Query: 435 NIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGM 494
IH ++I++ S V + LID+Y+KCG+L++A +F +K+K+IV W+ IIA G
Sbjct: 563 AIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKT--MKEKNIVSWNSIIAACGN 620
Query: 495 HGHGETAVSLFKEMVQ-SGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRA 553
HG + ++ LF EMV+ SG++P+++TF + +C H G +DEG+ F M E++ +
Sbjct: 621 HGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQ 680
Query: 554 DHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFE 613
+HY C+VDL GRAGRL EAY+ +++MP P VWG LLGAC +H NVEL EVA+ L +
Sbjct: 681 EHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMD 740
Query: 614 LEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEV 661
L+P N G YVL+S ++ R W+ VR +M E+ ++K P +S IE+
Sbjct: 741 LDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEI 788
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/603 (28%), Positives = 310/603 (51%), Gaps = 14/603 (2%)
Query: 6 HHTLPKTTHLVIKLVQQYAATKSIAGTKQLHAFIIT---SGPLFTHLRS-SLVRAYGHVS 61
T+P+ L L+Q + + KQ+HAF+I SG +T R + G S
Sbjct: 31 EETIPRRLSL---LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFS 87
Query: 62 NVRILFDEMSERSSFL--YNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIK 119
+ +F + R S + +N+++ + +NG + +L + ML G +PD T+P ++K
Sbjct: 88 DCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFG-VSPDVSTFPCLVK 146
Query: 120 ACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVS 179
AC L K L V G D + FV + LI Y+ +G++ K+FD + + V
Sbjct: 147 ACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVI 206
Query: 180 WNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVA 239
WN +++GY K + F M + P+ + VL C I++G +H LV
Sbjct: 207 WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 266
Query: 240 GGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALG 299
+ + N+L+ MY KCG ++A +F MS D VTW MI+GY +G + +L
Sbjct: 267 VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLT 326
Query: 300 LFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYA 359
F M GV P+++T SLL + S L+ + +H + ++ ++ ++ + +ALID Y
Sbjct: 327 FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYF 386
Query: 360 KCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNS 419
KC V ++ +F++ + V + A+++G +HNGL ++E+FR ++ + PN+ TL S
Sbjct: 387 KCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVS 446
Query: 420 LLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKD 479
+LP IL L+ +H ++I+ GF + + +ID+Y+KCG + A++IF +
Sbjct: 447 ILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFER--LSK 504
Query: 480 KDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDL 539
+DIV W+ +I + A+ +F++M SG+ + V+ ++AL AC++ G +
Sbjct: 505 RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAI 564
Query: 540 FNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHG 599
FM++ H S + ++D+ + G L A ++ +TM K + W +++ AC HG
Sbjct: 565 HGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS-WNSIIAACGNHG 622
Query: 600 NVE 602
++
Sbjct: 623 KLK 625
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/612 (37%), Positives = 356/612 (58%), Gaps = 9/612 (1%)
Query: 52 SLVRAYGHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDN 111
SL +G+ + R++FD++ E +L+ +++ Y N S + +K++ +++ G + D+
Sbjct: 84 SLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHG-FRYDD 142
Query: 112 YTYPIVIKACTDLAWRKLGIALHGR-VLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFD 170
+ +KACT+L G +H + V + FD G L+ MY GE+K+A KVF+
Sbjct: 143 IVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFN 200
Query: 171 AMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEM 230
+ +VV W ++I+GY KN +E LV+F+ M ++ V + + +++ AC L +
Sbjct: 201 DITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQ 260
Query: 231 GRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYAL 290
G+ H + + + +L+DMYVKCG ++ AR VF+ S D+V WT+MI GY
Sbjct: 261 GKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTH 320
Query: 291 NGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIV 350
NG V AL LFQ M+ ++PN +TI S+LS C + L+ GRS+H +IK + + V
Sbjct: 321 NGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNV 379
Query: 351 ETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVV 410
AL+ MYAKC + + VF S+K V WN+I++G NG +A+ LF +M E V
Sbjct: 380 ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESV 439
Query: 411 EPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFL--SVVEVSTGLIDIYSKCGSLESA 468
PN T+ SL A A L L ++H Y ++ GFL S V V T L+D Y+KCG +SA
Sbjct: 440 TPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA 499
Query: 469 HKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACS 528
IF I++K+ + WS +I GYG G ++ LF+EM++ +PNE TFTS L AC
Sbjct: 500 RLIFD--TIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACG 557
Query: 529 HGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVW 588
H G+++EG F+ M +++ HYTC+VD+L RAG L++A D+I MP++P +
Sbjct: 558 HTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCF 617
Query: 589 GALLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEK 648
GA L C +H +LGE+ K + +L P++ YVL+S LY++ RW A+ VR++M ++
Sbjct: 618 GAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQR 677
Query: 649 GLRKAPAHSLIE 660
GL K HS +E
Sbjct: 678 GLSKIAGHSTME 689
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 152/501 (30%), Positives = 241/501 (48%), Gaps = 12/501 (2%)
Query: 134 HGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYA 193
HG + G D + L+++Y FG K AR VFD + E W ++ Y N +
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 194 KEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNAL 253
E + ++D ++K G D L AC L++++ G+ IH + N+ L
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGL 182
Query: 254 VDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNS 313
+DMY KCG + A VF+ ++ R+VV WTSMI GY N L LF M+ V N
Sbjct: 183 LDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNE 242
Query: 314 LTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFAR 373
T G+L+ AC+ L L +G+ H +K +E + T+L+DMY KC + + +VF
Sbjct: 243 YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE 302
Query: 374 TSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQA 433
S V W A++ G HNG +A+ LF++M ++PN T+ S+L ++ +L+
Sbjct: 303 HSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELG 362
Query: 434 MNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYG 493
++H I+ G V+ L+ +Y+KC A +F E+ +KDIV W+ II+G+
Sbjct: 363 RSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVF-EME-SEKDIVAWNSIISGFS 419
Query: 494 MHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRA 553
+G A+ LF M V PN VT S AC+ G L G L + ++ S +
Sbjct: 420 QNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSS 479
Query: 554 DHY-TCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLF 612
H T ++D + G A + T+ K T W A++G G+ + + LF
Sbjct: 480 VHVGTALLDFYAKCGDPQSARLIFDTIEEKNT-ITWSAMIGGYGKQGDT----IGSLELF 534
Query: 613 E--LEPENPGNYVLLSKLYSA 631
E L+ + N + + SA
Sbjct: 535 EEMLKKQQKPNESTFTSILSA 555
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 155/300 (51%), Gaps = 3/300 (1%)
Query: 228 IEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMING 287
I+ R H ++ G L +I+ LV +Y G +ARLVFD++ E D W M+
Sbjct: 57 IDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRC 116
Query: 288 YALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECE 347
Y LN + + L+ L+ G R + + L AC+ L L G+ +H +K +
Sbjct: 117 YCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFD 175
Query: 348 VIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLV 407
+V T L+DMYAKC +K + +VF + + V W +++AG V N L + + LF +M
Sbjct: 176 NVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRE 235
Query: 408 EVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLES 467
V N+ T +L+ A L+ L Q H L++ G + T L+D+Y KCG + +
Sbjct: 236 NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISN 295
Query: 468 AHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHAC 527
A ++F+E D+V+W+ +I GY +G A+SLF++M ++PN VT S L C
Sbjct: 296 ARRVFNE--HSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC 353
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/622 (36%), Positives = 352/622 (56%), Gaps = 36/622 (5%)
Query: 74 SSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIAL 133
+ F+YN++++ YA +G ++++ +FL M+ G +PD YT+P + AC + GI +
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSG-ISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 134 HGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYA 193
HG ++ G+ D FV N L+ Y GE+ +ARKVFD M E +VVSW ++I GY + +A
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 194 KEALVVFDWMLKSG-VEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNA 252
K+A+ +F M++ V P+ ++V V+ AC L+++E G ++ + + N +A
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 253 LVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPN 312
LVDMY+KC +++ A+ +FD ++ +M + Y G R ALG+F LM GVRP+
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 313 SLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFA 372
+++ S +S+CS L + G+S H + ++ E + ALIDMY KC+ +F++F
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 373 RTSKKKTVPWNAILAGCVHNG-------------------------------LARKAVEL 401
R S K V WN+I+AG V NG L +A+E+
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 402 FRQMLV-EVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYS 460
F M E V + T+ S+ A L L A I+ Y+ + G V + T L+D++S
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 461 KCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTF 520
+CG ESA IF+ + ++D+ W+ I M G+ E A+ LF +M++ G++P+ V F
Sbjct: 517 RCGDPESAMSIFNSLT--NRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 521 TSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMP 580
AL ACSHGGL+ +G ++F ML+ H HY C+VDLLGRAG L+EA LI MP
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634
Query: 581 LKPTHAVWGALLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAEN 640
++P +W +LL AC + GNVE+ AA+ + L PE G+YVLLS +Y++ RW D
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAK 694
Query: 641 VRDVMDEKGLRKAPAHSLIEVR 662
VR M EKGLRK P S I++R
Sbjct: 695 VRLSMKEKGLRKPPGTSSIQIR 716
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/521 (27%), Positives = 257/521 (49%), Gaps = 50/521 (9%)
Query: 24 AATKSIAGTKQLHAFIITSG---PLFTHLRSSLVRAY---GHVSNVRILFDEMSERSSFL 77
A +++ Q+H I+ G LF +++SLV Y G + + R +FDEMSER+
Sbjct: 145 AKSRAKGNGIQIHGLIVKMGYAKDLF--VQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 78 YNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRV 137
+ +++ YA+ + D++ +F M+R E P++ T VI AC L + G ++ +
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 138 LITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEAL 197
+G +++ + + L+ MYM + A+++FD ++ N + S Y + +EAL
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 198 VVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAW----NAL 253
VF+ M+ SGV PD S++S + +C L+ I G+ H V L +W NAL
Sbjct: 323 GVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYV----LRNGFESWDNICNAL 378
Query: 254 VDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLM--------- 304
+DMY+KC + A +FDRMS + VVTW S++ GY NG+V A F+ M
Sbjct: 379 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 438
Query: 305 -----------------------QFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIK 341
EGV + +T+ S+ SAC L L + ++ + K
Sbjct: 439 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 498
Query: 342 QNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVEL 401
++ +V + T L+DM+++C + + +F + + W A + G A +A+EL
Sbjct: 499 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIEL 558
Query: 402 FRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTG-LIDIYS 460
F M+ + ++P+ L A + +QQ I +++ +S +V G ++D+
Sbjct: 559 FDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLG 618
Query: 461 KCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETA 501
+ G LE A ++ ++P++ D V+W+ ++A + G+ E A
Sbjct: 619 RAGLLEEAVQLIEDMPMEPND-VIWNSLLAACRVQGNVEMA 658
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/611 (36%), Positives = 352/611 (57%), Gaps = 5/611 (0%)
Query: 57 YGHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPI 116
+G++ + +F +MSER+ F +N ++ YA+ G +++ ++ ML +G PD YT+P
Sbjct: 142 FGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPC 201
Query: 117 VIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHS 176
V++ C + G +H V+ G+++D V N LI MY+ G+VK+AR +FD M
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261
Query: 177 VVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHE 236
++SWN +ISGYF+N E L +F M V+PD ++ SV+ AC L + +GR IH
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 237 LVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRN 296
V +I+ N+L MY+ GS EA +F RM +D+V+WT+MI+GY N
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381
Query: 297 ALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALID 356
A+ +++M + V+P+ +T+ ++LSAC++L L G LH IK L VIV LI+
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441
Query: 357 MYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDAT 416
MY+KC + + +F +K + W +I+AG N +A+ RQM + ++PN T
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM-TLQPNAIT 500
Query: 417 LNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIP 476
L + L A A + L IH +++R G + L+D+Y +CG + +A +S+
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTA---WSQFN 557
Query: 477 IKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEG 536
+ KD+ W++++ GY G G V LF MV+S V+P+E+TF S L CS ++ +G
Sbjct: 558 SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQG 617
Query: 537 LDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACV 596
L F+ M E++ HY C+VDLLGRAG L EA+ I+ MP+ P AVWGALL AC
Sbjct: 618 LMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACR 676
Query: 597 IHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAH 656
IH ++LGE++A+ +FEL+ ++ G Y+LL LY+ +W++ VR +M E GL
Sbjct: 677 IHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGC 736
Query: 657 SLIEVRNILTA 667
S +EV+ + A
Sbjct: 737 SWVEVKGKVHA 747
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/508 (31%), Positives = 267/508 (52%), Gaps = 12/508 (2%)
Query: 88 NGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTF 147
NG +++K+ M L D + +++ C ++ G ++ L + +
Sbjct: 72 NGKLEEAMKLLNSMQEL-RVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVE 130
Query: 148 VGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWML-KS 206
+GN +AM++ FG + A VF M E ++ SWN L+ GY K Y EA+ ++ ML
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 207 GVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEA 266
GV+PD + VL CG + ++ G+ +H V +I NAL+ MYVKCG V A
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 267 RLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSL 326
RL+FDRM RD+++W +MI+GY NG L LF M+ V P+ +T+ S++SAC L
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 327 YYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAIL 386
+ GR +HA+ I ++ V +L MY + + ++F+R +K V W ++
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 387 AGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFL 446
+G +N L KA++ +R M + V+P++ T+ ++L A A L DL + +H I+ +
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 447 SVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFK 506
S V V+ LI++YSKC ++ A IF IP K+++ W+ IIAG ++ A+ +
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIP--RKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 507 EMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHY--TCIVDLLG 564
+M + +QPN +T T+AL AC+ G L G ++ +L +T D + ++D+
Sbjct: 489 QMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVL---RTGVGLDDFLPNALLDMYV 544
Query: 565 RAGRLDEAYDLIRTMPLKPTHAVWGALL 592
R GR++ A+ + K W LL
Sbjct: 545 RCGRMNTAWSQFNSQ--KKDVTSWNILL 570
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 208/404 (51%), Gaps = 12/404 (2%)
Query: 184 ISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRL 243
+ G N +EA+ + + M + V D V+++ C + + E G ++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 244 GKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQL 303
+ NA + M+V+ G++ +A VF +MSER++ +W ++ GYA G A+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 304 MQF-EGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCN 362
M + GV+P+ T +L C + L RG+ +H ++ E ++ V ALI MY KC
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 363 LVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLP 422
VK + +F R ++ + WNA+++G NG+ + +ELF M V+P+ TL S++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 423 AYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDI 482
A +L D + +IH Y+I GF + V L +Y GS A K+FS ++ KDI
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSR--MERKDI 363
Query: 483 VVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNF 542
V W+ +I+GY + + A+ ++ M Q V+P+E+T + L AC+ G LD G++L
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 543 MLENHQTCSRADHYTCI----VDLLGRAGRLDEAYDLIRTMPLK 582
++ +R Y + +++ + +D+A D+ +P K
Sbjct: 424 AIK-----ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK 462
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/635 (35%), Positives = 356/635 (56%), Gaps = 11/635 (1%)
Query: 34 QLHAFIITSG-PLFTHLRSSLVRAY---GHVSNVRILFDEMSERSSFLYNTVMKMYAQNG 89
QL +F++ SG ++ + L+ Y G++ R++FD + E+S+ + T++ + G
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 90 ASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVG 149
S+ SL++F ++ PD Y V+ AC+ L + + G +H +L G +MD +
Sbjct: 229 RSYVSLQLFYQLME-DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLM 287
Query: 150 NCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVE 209
N LI Y+ G V AA K+F+ M +++SW TL+SGY +NA KEA+ +F M K G++
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK 347
Query: 210 PDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLV 269
PD + S+L +C L + G +H LG + N+L+DMY KC + +AR V
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKV 407
Query: 270 FDRMSERDVVTWTSMINGYALNG---DVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSL 326
FD + DVV + +MI GY+ G ++ AL +F+ M+F +RP+ LT SLL A +SL
Sbjct: 408 FDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASL 467
Query: 327 YYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAIL 386
L + +H K L ++ +ALID+Y+ C +K S VF K V WN++
Sbjct: 468 TSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMF 527
Query: 387 AGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFL 446
AG V +A+ LF ++ + P++ T +++ A LA +Q HC L++ G
Sbjct: 528 AGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLE 587
Query: 447 SVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFK 506
++ L+D+Y+KCGS E AHK F +D+V W+ +I+ Y HG G+ A+ + +
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAA--SRDVVCWNSVISSYANHGEGKKALQMLE 645
Query: 507 EMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRA 566
+M+ G++PN +TF L ACSH GL+++GL F ML +HY C+V LLGRA
Sbjct: 646 KMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRA 704
Query: 567 GRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLS 626
GRL++A +LI MP KP VW +LL C GNVEL E AA+ +P++ G++ +LS
Sbjct: 705 GRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLS 764
Query: 627 KLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEV 661
+Y++ W +A+ VR+ M +G+ K P S I +
Sbjct: 765 NIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGI 799
Score = 278 bits (712), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 200/675 (29%), Positives = 333/675 (49%), Gaps = 47/675 (6%)
Query: 18 KLVQQYAATKSIAGTKQLHAFIITSG-PLFTHLRSSLVRAY---GHVSNVRILFDEMSER 73
+L+Q A+ + +H II G L T+L + L+ Y G + R +F++M ER
Sbjct: 49 RLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPER 108
Query: 74 SSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRK--LGI 131
+ ++T++ +G +SL +FL R + +P+ Y I+AC+ L R +
Sbjct: 109 NLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVF 168
Query: 132 ALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNA 191
L ++ +GFD D +VG LI Y+ G + AR VFDA+ E S V+W T+ISG K
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 192 YAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWN 251
+ +L +F +++ V PD + +VL AC L +E G+ IH + L + + N
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 252 ALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRP 311
L+D YVKCG V A +F+ M +++++WT++++GY N + A+ LF M G++P
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 312 NSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVF 371
+ S+L++C+SL+ L G +HA+TIK NL + V +LIDMYAKC+ + + +VF
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 372 ARTSKKKTVPWNAILAGCVHNGLA---RKAVELFRQMLVEVVEPNDATLNSLLPAYAILA 428
+ V +NA++ G G +A+ +FR M ++ P+ T SLL A A L
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 429 DLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVI 488
L + IH + +YG + + LID+YS C L+ + +F E+ + KD+V+W+ +
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKV--KDLVIWNSM 526
Query: 489 IAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACS-----------HGGLLDEGL 537
AGY E A++LF E+ S +P+E TF + + A H LL GL
Sbjct: 527 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL 586
Query: 538 D----LFNFMLENHQTCSRADH---------------YTCIVDLLGRAGRLDEAYDLIRT 578
+ + N +L+ + C + + ++ G +A ++
Sbjct: 587 ECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEK 646
Query: 579 M---PLKPTHAVWGALLGACVIHGNVE--LGEVAAKWLFELEPENPGNYVLLSKLYSAVR 633
M ++P + + +L AC G VE L + F +EPE +YV + L
Sbjct: 647 MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETE-HYVCMVSLLGRAG 705
Query: 634 RWKDAENVRDVMDEK 648
R A + + M K
Sbjct: 706 RLNKARELIEKMPTK 720
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/480 (28%), Positives = 237/480 (49%), Gaps = 9/480 (1%)
Query: 29 IAGTKQLHAFIITSG-PLFTHLRSSLVRAY---GHVSNVRILFDEMSERSSFLYNTVMKM 84
+ G KQ+HA I+ G + L + L+ +Y G V LF+ M ++ + T++
Sbjct: 265 LEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSG 324
Query: 85 YAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDM 144
Y QN +++++F M + G PD Y ++ +C L G +H +
Sbjct: 325 YKQNALHKEAMELFTSMSKFG-LKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN 383
Query: 145 DTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYA---KEALVVFD 201
D++V N LI MY + ARKVFD VV +N +I GY + EAL +F
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 202 WMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCG 261
M + P + VS+L A L + + + IH L+ L +I A +AL+D+Y C
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 262 SVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLS 321
+ ++RLVFD M +D+V W SM GY + AL LF +Q RP+ T ++++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 322 ACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVP 381
A +L ++ G+ H +K+ LEC + AL+DMYAKC + + + F + + V
Sbjct: 564 AAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVC 623
Query: 382 WNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLI 441
WN++++ ++G +KA+++ +M+ E +EPN T +L A + ++ + ++
Sbjct: 624 WNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML 683
Query: 442 RYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETA 501
R+G E ++ + + G L A ++ ++P K I VW +++G G+ E A
Sbjct: 684 RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAI-VWRSLLSGCAKAGNVELA 742
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/644 (37%), Positives = 361/644 (56%), Gaps = 19/644 (2%)
Query: 28 SIAGTKQLHAFIITSGPLFT-HLRSSLVRAYGHVSNV---RILFDEMSERSSFLYNTVMK 83
++ K LHA ++ S + + + LV Y ++ NV R FD + R + +N ++
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 84 MYAQNGASHDSLKMF-LGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGF 142
Y + G S + ++ F L ML G PD T+P V+KAC + G +H L GF
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSG-LTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGF 181
Query: 143 DMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDW 202
D +V LI +Y + V AR +FD M + SWN +ISGY ++ AKEAL
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT---- 237
Query: 203 MLKSGVEP-DCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCG 261
L +G+ D +VVS+L AC + G IH L + N L+D+Y + G
Sbjct: 238 -LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 262 SVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLS 321
+ + + VFDRM RD+++W S+I Y LN A+ LFQ M+ ++P+ LT+ SL S
Sbjct: 297 RLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLAS 356
Query: 322 ACSSLYYLKRGRSLHAWTIKQNLECE-VIVETALIDMYAKCNLVKLSFQVFARTSKKKTV 380
S L ++ RS+ +T+++ E + + A++ MYAK LV + VF +
Sbjct: 357 ILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI 416
Query: 381 PWNAILAGCVHNGLARKAVELFRQMLVE-VVEPNDATLNSLLPAYAILADLQQAMNIHCY 439
WN I++G NG A +A+E++ M E + N T S+LPA + L+Q M +H
Sbjct: 417 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 476
Query: 440 LIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGE 499
L++ G V V T L D+Y KCG LE A +F +IP + V W+ +IA +G HGHGE
Sbjct: 477 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS--VPWNTLIACHGFHGHGE 534
Query: 500 TAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCI 559
AV LFKEM+ GV+P+ +TF + L ACSH GL+DEG F M ++ HY C+
Sbjct: 535 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCM 594
Query: 560 VDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFELEPENP 619
VD+ GRAG+L+ A I++M L+P ++WGALL AC +HGNV+LG++A++ LFE+EPE+
Sbjct: 595 VDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHV 654
Query: 620 GNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVRN 663
G +VLLS +Y++ +W+ + +R + KGLRK P S +EV N
Sbjct: 655 GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDN 698
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 167/361 (46%), Gaps = 16/361 (4%)
Query: 224 YLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTS 283
Y ++ + +H + + +N+ LV++Y G+V AR FD + RDV W
Sbjct: 63 YCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNL 122
Query: 284 MINGYALNGDVRNALGLFQL-MQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQ 342
MI+GY G+ + F L M G+ P+ T S+L AC ++ G +H +K
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKF 179
Query: 343 NLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVEL- 401
+V V +LI +Y++ V + +F + WNA+++G +G A++A+ L
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 402 --FRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIY 459
R M + T+ SLL A D + + IH Y I++G S + VS LID+Y
Sbjct: 240 NGLRAM-------DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 460 SKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVT 519
++ G L K+F + + +D++ W+ II Y ++ A+SLF+EM S +QP+ +T
Sbjct: 293 AEFGRLRDCQKVFDRMYV--RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT 350
Query: 520 FTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTM 579
S S G + + F L +V + + G +D A + +
Sbjct: 351 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410
Query: 580 P 580
P
Sbjct: 411 P 411
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/537 (39%), Positives = 325/537 (60%), Gaps = 5/537 (0%)
Query: 133 LHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAY 192
+H R+L+ G F+ LI +FG++ AR+VFD + + WN +I GY +N +
Sbjct: 40 IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNH 99
Query: 193 AKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNA 252
++AL+++ M + V PD + +L AC L ++MGR +H V ++ N
Sbjct: 100 FQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNG 159
Query: 253 LVDMYVKCGSVNEARLVFD--RMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVR 310
L+ +Y KC + AR VF+ + ER +V+WT++++ YA NG+ AL +F M+ V+
Sbjct: 160 LIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVK 219
Query: 311 PNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQV 370
P+ + + S+L+A + L LK+GRS+HA +K LE E + +L MYAKC V + +
Sbjct: 220 PDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKIL 279
Query: 371 FARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADL 430
F + + WNA+++G NG AR+A+++F +M+ + V P+ ++ S + A A + L
Sbjct: 280 FDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSL 339
Query: 431 QQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIA 490
+QA +++ Y+ R + V +S+ LID+++KCGS+E A +F D+D+VVWS +I
Sbjct: 340 EQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR--TLDRDVVVWSAMIV 397
Query: 491 GYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTC 550
GYG+HG A+SL++ M + GV PN+VTF L AC+H G++ EG FN M +H+
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKIN 456
Query: 551 SRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKW 610
+ HY C++DLLGRAG LD+AY++I+ MP++P VWGALL AC H +VELGE AA+
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 611 LFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVRNILTA 667
LF ++P N G+YV LS LY+A R W VR M EKGL K S +EVR L A
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEA 573
Score = 267 bits (682), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/476 (32%), Positives = 267/476 (56%), Gaps = 8/476 (1%)
Query: 30 AGTKQLHAFIITSGPLFT-HLRSSLVRA---YGHVSNVRILFDEMSERSSFLYNTVMKMY 85
A KQ+HA ++ G F+ L + L+ A +G ++ R +FD++ F +N +++ Y
Sbjct: 35 AQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGY 94
Query: 86 AQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMD 145
++N D+L M+ M +L +PD++T+P ++KAC+ L+ ++G +H +V GFD D
Sbjct: 95 SRNNHFQDALLMYSNM-QLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDAD 153
Query: 146 TFVGNCLIAMYMNFGEVKAARKVFDA--MWEHSVVSWNTLISGYFKNAYAKEALVVFDWM 203
FV N LIA+Y + +AR VF+ + E ++VSW ++S Y +N EAL +F M
Sbjct: 154 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
Query: 204 LKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSV 263
K V+PD ++VSVL A L++++ GR IH V L +L MY KCG V
Sbjct: 214 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQV 273
Query: 264 NEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSAC 323
A+++FD+M +++ W +MI+GYA NG R A+ +F M + VRP++++I S +SAC
Sbjct: 274 ATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISAC 333
Query: 324 SSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWN 383
+ + L++ RS++ + + + +V + +ALIDM+AKC V+ + VF RT + V W+
Sbjct: 334 AQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWS 393
Query: 384 AILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRY 443
A++ G +G AR+A+ L+R M V PND T LL A +++ + +
Sbjct: 394 AMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADH 453
Query: 444 GFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGE 499
+ +ID+ + G L+ A+++ +P++ + VW +++ H H E
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ-PGVTVWGALLSACKKHRHVE 508
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/645 (34%), Positives = 348/645 (53%), Gaps = 12/645 (1%)
Query: 23 YAATKSIAGTKQLHAFIITSG-----PLFTHLRSSLVRAYGHVSNVRILFDEMSERSSFL 77
+ + SI+ Q HA II G L T L L G + R +F + FL
Sbjct: 27 FKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRL-SDLGAIYYARDIFLSVQRPDVFL 85
Query: 78 YNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRV 137
+N +M+ ++ N + H SL +F + + + P++ TY I A + + G +HG+
Sbjct: 86 FNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQA 145
Query: 138 LITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEAL 197
++ G D + +G+ ++ MY F V+ ARKVFD M E + WNT+ISGY KN E++
Sbjct: 146 VVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205
Query: 198 VVF-DWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDM 256
VF D + +S D +++ +LPA L+E+ +G IH L + + +
Sbjct: 206 QVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISL 265
Query: 257 YVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTI 316
Y KCG + +F + D+V + +MI+GY NG+ +L LF+ + G R S T+
Sbjct: 266 YSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTL 325
Query: 317 GSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSK 376
SL+ L + ++H + +K N V TAL +Y+K N ++ + ++F + +
Sbjct: 326 VSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE 382
Query: 377 KKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNI 436
K WNA+++G NGL A+ LFR+M PN T+ +L A A L L +
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV 442
Query: 437 HCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHG 496
H + F S + VST LI +Y+KCGS+ A ++F + K++ V W+ +I+GYG+HG
Sbjct: 443 HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE--VTWNTMISGYGLHG 500
Query: 497 HGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHY 556
G+ A+++F EM+ SG+ P VTF L+ACSH GL+ EG ++FN M+ + HY
Sbjct: 501 QGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHY 560
Query: 557 TCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFELEP 616
C+VD+LGRAG L A I M ++P +VW LLGAC IH + L ++ LFEL+P
Sbjct: 561 ACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDP 620
Query: 617 ENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEV 661
+N G +VLLS ++SA R + A VR ++ L KAP ++LIE+
Sbjct: 621 DNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEI 665
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/599 (35%), Positives = 345/599 (57%), Gaps = 9/599 (1%)
Query: 66 LFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLA 125
LFDEM++ +FL+N ++K + G ++++ + M+ G D +TYP VIK+ ++
Sbjct: 86 LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAG-VKADTFTYPFVIKSVAGIS 144
Query: 126 WRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLIS 185
+ G +H V+ GF D +V N LI++YM G A KVF+ M E +VSWN++IS
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS 204
Query: 186 GYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGK 245
GY +L++F MLK G +PD S +S L AC ++ +MG+ IH R+
Sbjct: 205 GYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIET 264
Query: 246 -NIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLM 304
++ +++DMY K G V+ A +F+ M +R++V W MI YA NG V +A FQ M
Sbjct: 265 GDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKM 324
Query: 305 QFE-GVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNL 363
+ G++P+ +T +LL A + L GR++H + +++ +++ETALIDMY +C
Sbjct: 325 SEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQ 380
Query: 364 VKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPA 423
+K + +F R ++K + WN+I+A V NG A+ELF+++ + P+ T+ S+LPA
Sbjct: 381 LKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPA 440
Query: 424 YAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIV 483
YA L + IH Y+++ + S + L+ +Y+ CG LE A K F+ I +KD +V
Sbjct: 441 YAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKD--VV 498
Query: 484 VWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFM 543
W+ II Y +HG G +V LF EM+ S V PN+ TF S L ACS G++DEG + F M
Sbjct: 499 SWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESM 558
Query: 544 LENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVEL 603
+ +HY C++DL+GR G A + MP PT +WG+LL A H ++ +
Sbjct: 559 KREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITI 618
Query: 604 GEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVR 662
E AA+ +F++E +N G YVLL +Y+ RW+D ++ +M+ KG+ + + S +E +
Sbjct: 619 AEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAK 677
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 240/466 (51%), Gaps = 12/466 (2%)
Query: 19 LVQQYAATKSIAGTKQLHAFIITSGPLF-THLRSSLVRAY---GHVSNVRILFDEMSERS 74
+++ A S+ K++HA +I G + ++ +SL+ Y G + +F+EM ER
Sbjct: 136 VIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERD 195
Query: 75 SFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALH 134
+N+++ Y G SL +F ML+ G + PD ++ + AC+ + K+G +H
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHVYSPKMGKEIH 254
Query: 135 GRVLITGFDM-DTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYA 193
+ + + D V ++ MY +GEV A ++F+ M + ++V+WN +I Y +N
Sbjct: 255 CHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRV 314
Query: 194 KEALVVFDWML-KSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNA 252
+A + F M ++G++PD + +++LPA L+ GR IH ++ A
Sbjct: 315 TDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETA 370
Query: 253 LVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPN 312
L+DMY +CG + A ++FDRM+E++V++W S+I Y NG +AL LFQ + + P+
Sbjct: 371 LIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPD 430
Query: 313 SLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFA 372
S TI S+L A + L GR +HA+ +K I+ +L+ MYA C ++ + + F
Sbjct: 431 STTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFN 490
Query: 373 RTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQ 432
K V WN+I+ +G R +V LF +M+ V PN +T SLL A +I + +
Sbjct: 491 HILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDE 550
Query: 433 AMNIHCYLIR-YGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPI 477
+ R YG +E ++D+ + G+ +A + E+P
Sbjct: 551 GWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPF 596
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/450 (30%), Positives = 237/450 (52%), Gaps = 14/450 (3%)
Query: 165 ARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGY 224
A ++FD M + WN +I G+ EA+ + M+ +GV+ D + V+ +
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 225 LKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSM 284
+ +E G+ IH +V ++ N+L+ +Y+K G +A VF+ M ERD+V+W SM
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 285 INGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNL 344
I+GY GD ++L LF+ M G +P+ + S L ACS +Y K G+ +H ++ +
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 345 EC-EVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFR 403
E +V+V T+++DMY+K V + ++F ++ V WN ++ NG A F+
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 404 QMLVEV-VEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKC 462
+M + ++P+ T +LLPA AIL + IH Y +R GFL + + T LID+Y +C
Sbjct: 323 KMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGEC 378
Query: 463 GSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTS 522
G L+SA IF + +K+++ W+ IIA Y +G +A+ LF+E+ S + P+ T S
Sbjct: 379 GQLKSAEVIFDRMA--EKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIAS 436
Query: 523 ALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLK 582
L A + L EG ++ +++++ + S +V + G L++A + LK
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKS-RYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLK 495
Query: 583 PTHAVWGALLGACVIHGNVELGEVAAKWLF 612
W +++ A +HG G ++ WLF
Sbjct: 496 DV-VSWNSIIMAYAVHG---FGRISV-WLF 520
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 170/346 (49%), Gaps = 24/346 (6%)
Query: 263 VNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSA 322
+ +A +FD M++ D W MI G+ G A+ + M F GV+ ++ T ++ +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 323 CSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPW 382
+ + L+ G+ +HA IK +V V +LI +Y K + +VF ++ V W
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 383 NAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIR 442
N++++G + G ++ LF++ML +P+ + S L A + + + IHC+ +R
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 443 YGFLS-VVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETA 501
+ V V T ++D+YSK G + A +IF+ + ++IV W+V+I Y +G A
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFN--GMIQRNIVAWNVMIGCYARNGRVTDA 317
Query: 502 VSLFKEMV-QSGVQPNEVTFTSALHACS-------HGGLLDEGLDLFNFMLENHQTCSRA 553
F++M Q+G+QP+ +T + L A + HG + G L + +LE
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGF-LPHMVLE-------- 368
Query: 554 DHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHG 599
T ++D+ G G+L A + M K + W +++ A V +G
Sbjct: 369 ---TALIDMYGECGQLKSAEVIFDRMAEKNVIS-WNSIIAAYVQNG 410
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 3/244 (1%)
Query: 358 YAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATL 417
+A L++ + Q+F +K WN ++ G GL +AV+ + +M+ V+ + T
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 418 NSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPI 477
++ + A ++ L++ IH +I+ GF+S V V LI +Y K G A K+F E+P
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP- 192
Query: 478 KDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGL 537
++DIV W+ +I+GY G G +++ LFKEM++ G +P+ + SAL ACSH G
Sbjct: 193 -ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 538 DLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVI 597
++ + + T I+D+ + G + A + M ++ W ++G
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIGCYAR 310
Query: 598 HGNV 601
+G V
Sbjct: 311 NGRV 314
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 138/285 (48%), Gaps = 8/285 (2%)
Query: 16 VIKLVQQYAATKSIAGTKQLHAFIITSGPL-FTHLRSSLVRAYGHVSNVR---ILFDEMS 71
VI + A+ + G + +H + + G L L ++L+ YG ++ ++FD M+
Sbjct: 334 VITSINLLPASAILEG-RTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA 392
Query: 72 ERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGI 131
E++ +N+++ Y QNG ++ +L++F + PD+ T ++ A + G
Sbjct: 393 EKNVISWNSIIAAYVQNGKNYSALELFQELWD-SSLVPDSTTIASILPAYAESLSLSEGR 451
Query: 132 ALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNA 191
+H ++ + + +T + N L+ MY G+++ ARK F+ + VVSWN++I Y +
Sbjct: 452 EIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHG 511
Query: 192 YAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMG-RMIHELVAGGRLGKNIAAW 250
+ + ++ +F M+ S V P+ ++ S+L AC ++ G + + I +
Sbjct: 512 FGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHY 571
Query: 251 NALVDMYVKCGSVNEARLVFDRMSERDVV-TWTSMINGYALNGDV 294
++D+ + G+ + A+ + M W S++N + D+
Sbjct: 572 GCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDI 616
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 235/660 (35%), Positives = 365/660 (55%), Gaps = 10/660 (1%)
Query: 11 KTTHLVIKLVQQYAATKSIAGTKQLHAFIITSG-PLFTHLRSSLVRAY----GHVSNVRI 65
+++ L+ L + +TKS+ K +H I+T G L SL+ Y H S R
Sbjct: 2 ESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCS-ARH 60
Query: 66 LFDEMSERSS-FLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDL 124
+F+ RS +++N++M Y++N HD+L++F +L PD++T+P VIKA L
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 125 AWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLI 184
LG +H V+ +G+ D V + L+ MY F + + +VFD M E V SWNT+I
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 185 SGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLG 244
S ++++ A++AL +F M SG EP+ S+ + AC L +E G+ IH
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 245 KNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLM 304
+ +ALVDMY KC + AR VF +M + +V W SMI GY GD ++ + + M
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 305 QFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLV 364
EG RP+ T+ S+L ACS L G+ +H + I+ + ++ V +LID+Y KC
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360
Query: 365 KLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAY 424
L+ VF++T K WN +++ + G KAVE++ QM+ V+P+ T S+LPA
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 425 AILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVV 484
+ LA L++ IH + + + + L+D+YSKCG+ + A +IF+ IP KD+V
Sbjct: 421 SQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP--KKDVVS 478
Query: 485 WSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFML 544
W+V+I+ YG HG A+ F EM + G++P+ VT + L AC H GL+DEGL F+ M
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMR 538
Query: 545 ENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHA-VWGALLGACVIHGNVEL 603
+ +HY+C++D+LGRAGRL EAY++I+ P +A + L AC +H L
Sbjct: 539 SKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSL 598
Query: 604 GEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVRN 663
G+ A+ L E P++ Y++L LY++ W A VR M E GLRK P S IE+ +
Sbjct: 599 GDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSD 658
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 234/679 (34%), Positives = 370/679 (54%), Gaps = 33/679 (4%)
Query: 4 PSHHTLPKTTHLVIKLVQQYAATKSIAGTKQLHAFIITSG-----PLFTHLRSSLVRAYG 58
P ++ P L++ A + + KQ+HA + G + +L R G
Sbjct: 95 PDNYAFPA-------LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 147
Query: 59 HVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVI 118
V +FD +SER+ +N+++ +L+ F ML P ++T V+
Sbjct: 148 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD-ENVEPSSFTLVSVV 206
Query: 119 KACTDLAWRK---LGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEH 175
AC++L + +G +H L G ++++F+ N L+AMY G++ +++ + +
Sbjct: 207 TACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR 265
Query: 176 SVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIH 235
+V+WNT++S +N EAL M+ GVEPD ++ SVLPAC +L+ + G+ +H
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 236 EL-VAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDV 294
+ G L +N +ALVDMY C V R VFD M +R + W +MI GY+ N
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD 385
Query: 295 RNALGLFQLMQFE-GVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETA 353
+ AL LF M+ G+ NS T+ ++ AC R ++H + +K+ L+ + V+
Sbjct: 386 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 445
Query: 354 LIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQM--LVEVV- 410
L+DMY++ + ++ ++F + + V WN ++ G V + A+ L +M L V
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 411 --------EPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKC 462
+PN TL ++LP+ A L+ L + IH Y I+ + V V + L+D+Y+KC
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 565
Query: 463 GSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTS 522
G L+ + K+F +IP K+++ W+VII YGMHG+G+ A+ L + M+ GV+PNEVTF S
Sbjct: 566 GCLQMSRKVFDQIP--QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFIS 623
Query: 523 ALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLK 582
ACSH G++DEGL +F M ++ +DHY C+VDLLGRAGR+ EAY L+ MP
Sbjct: 624 VFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD 683
Query: 583 PTHA-VWGALLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENV 641
A W +LLGA IH N+E+GE+AA+ L +LEP +YVLL+ +YS+ W A V
Sbjct: 684 FNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEV 743
Query: 642 RDVMDEKGLRKAPAHSLIE 660
R M E+G+RK P S IE
Sbjct: 744 RRNMKEQGVRKEPGCSWIE 762
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/521 (31%), Positives = 264/521 (50%), Gaps = 25/521 (4%)
Query: 98 FLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTF-VGNCLIAMY 156
++ M+ LG PDNY +P ++KA DL +LG +H V G+ +D+ V N L+ +Y
Sbjct: 85 YVDMIVLG-IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLY 143
Query: 157 MNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVV 216
G+ A KVFD + E + VSWN+LIS + AL F ML VEP ++V
Sbjct: 144 RKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLV 203
Query: 217 SVLPACGYLKEIE---MGRMIHELVAGGRLGK-NIAAWNALVDMYVKCGSVNEARLVFDR 272
SV+ AC L E MG+ +H G R G+ N N LV MY K G + ++++
Sbjct: 204 SVVTACSNLPMPEGLMMGKQVH--AYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGS 261
Query: 273 MSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRG 332
RD+VTW ++++ N + AL + M EGV P+ TI S+L ACS L L+ G
Sbjct: 262 FGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 321
Query: 333 RSLHAWTIKQ-NLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVH 391
+ LHA+ +K +L+ V +AL+DMY C V +VF +K WNA++AG
Sbjct: 322 KELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ 381
Query: 392 NGLARKAVELFRQMLVEV-VEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVE 450
N ++A+ LF M + N T+ ++PA + IH ++++ G
Sbjct: 382 NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF 441
Query: 451 VSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEM-- 508
V L+D+YS+ G ++ A +IF + ++D+D+V W+ +I GY H E A+ L +M
Sbjct: 442 VQNTLMDMYSRLGKIDIAMRIFGK--MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499
Query: 509 ----VQSG-----VQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCI 559
V G ++PN +T + L +C+ L +G ++ + ++N+ A + +
Sbjct: 500 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG-SAL 558
Query: 560 VDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGN 600
VD+ + G L + + +P K W ++ A +HGN
Sbjct: 559 VDMYAKCGCLQMSRKVFDQIPQKNV-ITWNVIIMAYGMHGN 598
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 382 WNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLI 441
W +L V + L R+AV + M+V ++P++ +LL A A L D++ IH ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 442 RYGF-LSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGET 500
++G+ + V V+ L+++Y KCG + +K+F I +++ V W+ +I+ E
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR--ISERNQVSWNSLISSLCSFEKWEM 182
Query: 501 AVSLFKEMVQSGVQPNEVTFTSALHACSH 529
A+ F+ M+ V+P+ T S + ACS+
Sbjct: 183 ALEAFRCMLDENVEPSSFTLVSVVTACSN 211
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/653 (34%), Positives = 357/653 (54%), Gaps = 9/653 (1%)
Query: 17 IKLVQQYAATKSIAGTKQLHAFIITSGPLF-THLRSSLVRAYGH---VSNVRILFDEMSE 72
I L+ ++++S+A +++H I+ S + T L + ++ YG + + R +FD M E
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130
Query: 73 RSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIA 132
R+ Y +V+ Y+QNG ++++++L ML+ + PD + + +IKAC + LG
Sbjct: 131 RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ-EDLVPDQFAFGSIIKACASSSDVGLGKQ 189
Query: 133 LHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAY 192
LH +V+ N LIAMY+ F ++ A +VF + ++SW+++I+G+ + +
Sbjct: 190 LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGF 249
Query: 193 AKEALVVFDWMLKSGV-EPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWN 251
EAL ML GV P+ S L AC L + G IH L L N A
Sbjct: 250 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC 309
Query: 252 ALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRP 311
+L DMY +CG +N AR VFD++ D +W +I G A NG A+ +F M+ G P
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIP 369
Query: 312 NSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVF 371
+++++ SLL A + L +G +H++ IK ++ V +L+ MY C+ + F +F
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLF 429
Query: 372 AR-TSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADL 430
+ +V WN IL C+ + + + LF+ MLV EP+ T+ +LL ++ L
Sbjct: 430 EDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSL 489
Query: 431 QQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIA 490
+ +HCY ++ G + GLID+Y+KCGSL A +IF + ++D+V WS +I
Sbjct: 490 KLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM--DNRDVVSWSTLIV 547
Query: 491 GYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTC 550
GY G GE A+ LFKEM +G++PN VTF L ACSH GL++EGL L+ M H
Sbjct: 548 GYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGIS 607
Query: 551 SRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKW 610
+H +C+VDLL RAGRL+EA I M L+P VW LL AC GNV L + AA+
Sbjct: 608 PTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAEN 667
Query: 611 LFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVRN 663
+ +++P N +VLL ++++ W++A +R M + ++K P S IE+ +
Sbjct: 668 ILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIED 720
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 238/470 (50%), Gaps = 7/470 (1%)
Query: 113 TYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAM 172
TY +I AC+ G +H +L + DT + N +++MY G ++ AR+VFD M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 173 WEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGR 232
E ++VS+ ++I+GY +N EA+ ++ ML+ + PD + S++ AC ++ +G+
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 233 MIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNG 292
+H V ++ A NAL+ MYV+ +++A VF + +D+++W+S+I G++ G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 293 DVRNALG-LFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVE 351
AL L +++ F PN GS L ACSSL G +H IK L I
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 352 TALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVE 411
+L DMYA+C + + +VF + + T WN I+AG +NG A +AV +F QM
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 412 PNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKI 471
P+ +L SLL A L Q M IH Y+I++GFL+ + V L+ +Y+ C L +
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 472 FSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGG 531
F + + D V W+ I+ H + LFK M+ S +P+ +T + L C
Sbjct: 429 FEDFR-NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEIS 487
Query: 532 LLDEGLDLFNFMLENHQTCSRADHY--TCIVDLLGRAGRLDEAYDLIRTM 579
L G + + L +T + + ++D+ + G L +A + +M
Sbjct: 488 SLKLGSQVHCYSL---KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/604 (35%), Positives = 347/604 (57%), Gaps = 4/604 (0%)
Query: 58 GHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIV 117
G ++ R +FDEM R +N+++ Y+ +G ++L+++ L+ PD++T V
Sbjct: 155 GLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY-HELKNSWIVPDSFTVSSV 213
Query: 118 IKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSV 177
+ A +L K G LHG L +G + V N L+AMY+ F AR+VFD M
Sbjct: 214 LPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDS 273
Query: 178 VSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHEL 237
VS+NT+I GY K +E++ +F L +PD +V SVL ACG+L+++ + + I+
Sbjct: 274 VSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNY 332
Query: 238 VAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNA 297
+ N L+D+Y KCG + AR VF+ M +D V+W S+I+GY +GD+ A
Sbjct: 333 MLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEA 392
Query: 298 LGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDM 357
+ LF++M + + +T L+S + L LK G+ LH+ IK + ++ V ALIDM
Sbjct: 393 MKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDM 452
Query: 358 YAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATL 417
YAKC V S ++F+ TV WN +++ CV G +++ QM V P+ AT
Sbjct: 453 YAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATF 512
Query: 418 NSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPI 477
LP A LA + IHC L+R+G+ S +++ LI++YSKCG LE++ ++F +
Sbjct: 513 LVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFER--M 570
Query: 478 KDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGL 537
+D+V W+ +I YGM+G GE A+ F +M +SG+ P+ V F + ++ACSH GL+DEGL
Sbjct: 571 SRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGL 630
Query: 538 DLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVI 597
F M +++ +HY C+VDLL R+ ++ +A + I+ MP+KP ++W ++L AC
Sbjct: 631 ACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRT 690
Query: 598 HGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHS 657
G++E E ++ + EL P++PG +L S Y+A+R+W +R + +K + K P +S
Sbjct: 691 SGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYS 750
Query: 658 LIEV 661
IEV
Sbjct: 751 WIEV 754
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 183/618 (29%), Positives = 316/618 (51%), Gaps = 24/618 (3%)
Query: 24 AATKSIAGTKQLHAFIITSGPLFTHLRS-SLVRAYGH----VSNVRILFDEMSERSSFLY 78
+++ ++ +++HA +I+ G + S L+ Y H S++ + ++ +L+
Sbjct: 15 SSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLW 74
Query: 79 NTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVL 138
N++++ +++NG ++L+ F G LR + +PD YT+P VIKAC L ++G ++ ++L
Sbjct: 75 NSIIRAFSKNGLFPEALE-FYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 139 ITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALV 198
GF+ D FVGN L+ MY G + AR+VFD M +VSWN+LISGY + Y +EAL
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193
Query: 199 VFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYV 258
++ + S + PD +V SVLPA G L ++ G+ +H + + N LV MY+
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYL 253
Query: 259 KCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGS 318
K +AR VFD M RD V++ +MI GY V ++ +F L + +P+ LT+ S
Sbjct: 254 KFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDLLTVSS 312
Query: 319 LLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKK 378
+L AC L L + ++ + +K E V LID+YAKC + + VF K
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKD 372
Query: 379 TVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHC 438
TV WN+I++G + +G +A++LF+ M++ + + T L+ LADL+ +H
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 439 YLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHG 498
I+ G + VS LID+Y+KCG + + KIFS + D V W+ +I+ G
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT--GDTVTWNTVISACVRFGDF 490
Query: 499 ETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLD----LFNFMLENHQTCSRAD 554
T + + +M +S V P+ TF L C+ G + L F E+ A
Sbjct: 491 ATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA- 549
Query: 555 HYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFEL 614
++++ + G L+ + + M + W ++ A ++G GE A + ++
Sbjct: 550 ----LIEMYSKCGCLENSSRVFERMSRRDV-VTWTGMIYAYGMYGE---GEKALETFADM 601
Query: 615 EPEN--PGNYVLLSKLYS 630
E P + V ++ +Y+
Sbjct: 602 EKSGIVPDSVVFIAIIYA 619
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 123/238 (51%), Gaps = 6/238 (2%)
Query: 309 VRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSF 368
R +S I LS+ S+L L+R +HA I L+ LID Y+ S
Sbjct: 3 TRVSSPFISRALSSSSNLNELRR---IHALVISLGLDSSDFFSGKLIDKYSHFREPASSL 59
Query: 369 QVFARTSKKKTV-PWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAIL 427
VF R S K V WN+I+ NGL +A+E + ++ V P+ T S++ A A L
Sbjct: 60 SVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGL 119
Query: 428 ADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSV 487
D + ++ ++ GF S + V L+D+YS+ G L A ++F E+P+ +D+V W+
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV--RDLVSWNS 177
Query: 488 IIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLE 545
+I+GY HG+ E A+ ++ E+ S + P+ T +S L A + ++ +G L F L+
Sbjct: 178 LISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK 235
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/649 (34%), Positives = 358/649 (55%), Gaps = 10/649 (1%)
Query: 19 LVQQYAATKSIAGTKQLHAFIITSGPLFT-HLRSSLVRAYGH---VSNVRILFDEMSER- 73
L++ A + I +LH+ ++ G T + ++LV Y +S R LFD E+
Sbjct: 188 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 247
Query: 74 SSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIAL 133
+ L+N+++ Y+ +G S ++L++F M G P++YT + AC ++ KLG +
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGP-APNSYTIVSALTACDGFSYAKLGKEI 306
Query: 134 HGRVLITG-FDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAY 192
H VL + + +V N LIAMY G++ A ++ M VV+WN+LI GY +N
Sbjct: 307 HASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLM 366
Query: 193 AKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNA 252
KEAL F M+ +G + D S+ S++ A G L + G +H V N+ N
Sbjct: 367 YKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNT 426
Query: 253 LVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPN 312
L+DMY KC F RM ++D+++WT++I GYA N AL LF+ + + + +
Sbjct: 427 LIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEID 486
Query: 313 SLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFA 372
+ +GS+L A S L + + +H +++ L + +++ L+D+Y KC + + +VF
Sbjct: 487 EMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFE 545
Query: 373 RTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQ 432
K V W ++++ NG +AVELFR+M+ + + L +L A A L+ L +
Sbjct: 546 SIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNK 605
Query: 433 AMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGY 492
IHCYL+R GF ++ ++D+Y+ CG L+SA +F I + K ++ ++ +I Y
Sbjct: 606 GREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRI--ERKGLLQYTSMINAY 663
Query: 493 GMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSR 552
GMHG G+ AV LF +M V P+ ++F + L+ACSH GLLDEG M ++
Sbjct: 664 GMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPW 723
Query: 553 ADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLF 612
+HY C+VD+LGRA + EA++ ++ M +PT VW ALL AC H E+GE+AA+ L
Sbjct: 724 PEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLL 783
Query: 613 ELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEV 661
ELEP+NPGN VL+S +++ RW D E VR M G+ K P S IE+
Sbjct: 784 ELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEM 832
Score = 278 bits (711), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 191/642 (29%), Positives = 317/642 (49%), Gaps = 48/642 (7%)
Query: 27 KSIAGTKQLHAFIITSGPLFT--HLRSSLVRAYGH---VSNVRILFDEMSERSSFLYNTV 81
++++ +QLH+ I + P F L LV YG + + +FDEM +R++F +NT+
Sbjct: 94 RAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTM 153
Query: 82 MKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITG 141
+ Y NG +L ++ M R+ ++P ++KAC L + G LH ++ G
Sbjct: 154 IGAYVSNGEPASALALYWNM-RVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLG 212
Query: 142 FDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEH-SVVSWNTLISGYFKNAYAKEALVVF 200
+ F+ N L++MY ++ AAR++FD E V WN+++S Y + + E L +F
Sbjct: 213 YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELF 272
Query: 201 DWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIH-ELVAGGRLGKNIAAWNALVDMYVK 259
M +G P+ ++VS L AC ++G+ IH ++ + NAL+ MY +
Sbjct: 273 REMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTR 332
Query: 260 CGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSL 319
CG + +A + +M+ DVVTW S+I GY N + AL F M G + + +++ S+
Sbjct: 333 CGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSI 392
Query: 320 LSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKT 379
++A L L G LHA+ IK + + V LIDMY+KCNL + F R K
Sbjct: 393 IAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDL 452
Query: 380 VPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCY 439
+ W ++AG N +A+ELFR + + +E ++ L S+L A ++L + IHC+
Sbjct: 453 ISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH 512
Query: 440 LIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGE 499
++R G L V + L+D+Y KC ++ A ++F IK KD+V W+ +I+ ++G+
Sbjct: 513 ILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFES--IKGKDVVSWTSMISSSALNGNES 569
Query: 500 TAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLF------NFMLENHQTCSRA 553
AV LF+ MV++G+ + V L A + L++G ++ F LE +
Sbjct: 570 EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629
Query: 554 DHYTC---------IVDLLGRAGRLD------------------EAYDLIRTMPLKPTHA 586
D Y C + D + R G L E +D +R + P H
Sbjct: 630 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHI 689
Query: 587 VWGALLGACVIHGNVELGEVAAKWL---FELEPENPGNYVLL 625
+ ALL AC G ++ G K + +ELEP P +YV L
Sbjct: 690 SFLALLYACSHAGLLDEGRGFLKIMEHEYELEPW-PEHYVCL 730
Score = 222 bits (566), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 258/516 (50%), Gaps = 36/516 (6%)
Query: 102 LRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLIT--GFDMDTFVGNCLIAMYMNF 159
L + E N + V++ C G LH R+ T F++D G L+ MY
Sbjct: 71 LDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVFMYGKC 129
Query: 160 GEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVL 219
G + A KVFD M + + +WNT+I Y N AL ++ M GV +S ++L
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 189
Query: 220 PACGYLKEIEMGRMIHELVAGGRLGKNIAAW--NALVDMYVKCGSVNEARLVFDRMSER- 276
AC L++I G +H L+ +LG + + NALV MY K ++ AR +FD E+
Sbjct: 190 KACAKLRDIRSGSELHSLLV--KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 247
Query: 277 DVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLH 336
D V W S+++ Y+ +G L LF+ M G PNS TI S L+AC Y K G+ +H
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307
Query: 337 AWTIKQNL-ECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLA 395
A +K + E+ V ALI MY +C + + ++ + + V WN+++ G V N +
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY 367
Query: 396 RKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGL 455
++A+E F M+ + ++ ++ S++ A L++L M +H Y+I++G+ S ++V L
Sbjct: 368 KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTL 427
Query: 456 IDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQP 515
ID+YSKC + F + + DKD++ W+ +IAGY + A+ LF+++ + ++
Sbjct: 428 IDMYSKCNLTCYMGRAF--LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 485
Query: 516 NEVTFTSALHACS-----------HGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLG 564
+E+ S L A S H +L +G L + +++N +VD+ G
Sbjct: 486 DEMILGSILRASSVLKSMLIVKEIHCHILRKG--LLDTVIQNE-----------LVDVYG 532
Query: 565 RAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGN 600
+ + A + ++ K W +++ + ++GN
Sbjct: 533 KCRNMGYATRVFESIKGKDV-VSWTSMISSSALNGN 567
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/599 (34%), Positives = 324/599 (54%), Gaps = 71/599 (11%)
Query: 133 LHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAM-------W------------ 173
+H V+ +GF + F+ N LI Y G ++ R+VFD M W
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 174 ------------EHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPA 221
E +WN+++SG+ ++ +EAL F M K G + S SVL A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 222 CGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTW 281
C L ++ G +H L+A ++ +ALVDMY KCG+VN+A+ VFD M +R+VV+W
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 282 TSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIK 341
S+I + NG AL +FQ+M V P+ +T+ S++SAC+SL +K G+ +H +K
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 342 QN-LECEVIVETALIDMYAKCNLVKLSFQVF----------------------------- 371
+ L ++I+ A +DMYAKC+ +K + +F
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARL 341
Query: 372 --ARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILAD 429
+ +++ V WNA++AG NG +A+ LF + E V P + ++L A A LA+
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE 401
Query: 430 LQQAMNIHCYLIRYGFL------SVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIV 483
L M H +++++GF + V LID+Y KCG +E + +F ++ ++D V
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM--MERDCV 459
Query: 484 VWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFM 543
W+ +I G+ +G+G A+ LF+EM++SG +P+ +T L AC H G ++EG F+ M
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519
Query: 544 LENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVEL 603
+ DHYTC+VDLLGRAG L+EA +I MP++P +WG+LL AC +H N+ L
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITL 579
Query: 604 GEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVR 662
G+ A+ L E+EP N G YVLLS +Y+ + +W+D NVR M ++G+ K P S I+++
Sbjct: 580 GKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQ 638
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/641 (32%), Positives = 339/641 (52%), Gaps = 7/641 (1%)
Query: 27 KSIAGTKQLHAFIITSG-PLFTHLRSSLVRAYGHVSNV---RILFDEMSERSSFLYNTVM 82
+S+ +QLH ++ G T++ ++LV Y H+ N+ +F MS+R + YNT++
Sbjct: 302 ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLI 361
Query: 83 KMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGF 142
+Q G ++++F M L PD+ T ++ AC+ G LH GF
Sbjct: 362 NGLSQCGYGEKAMELFKRM-HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGF 420
Query: 143 DMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDW 202
+ + L+ +Y +++ A F +VV WN ++ Y + + +F
Sbjct: 421 ASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ 480
Query: 203 MLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGS 262
M + P+ + S+L C L ++E+G IH + N + L+DMY K G
Sbjct: 481 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 540
Query: 263 VNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSA 322
++ A + R + +DVV+WT+MI GY AL F+ M G+R + + + + +SA
Sbjct: 541 LDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 600
Query: 323 CSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPW 382
C+ L LK G+ +HA ++ + AL+ +Y++C ++ S+ F +T + W
Sbjct: 601 CAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAW 660
Query: 383 NAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIR 442
NA+++G +G +A+ +F +M E ++ N+ T S + A + A+++Q +H + +
Sbjct: 661 NALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 720
Query: 443 YGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAV 502
G+ S EV LI +Y+KCGS+ A K F E+ K++ V W+ II Y HG G A+
Sbjct: 721 TGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE--VSWNAIINAYSKHGFGSEAL 778
Query: 503 SLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDL 562
F +M+ S V+PN VT L ACSH GL+D+G+ F M + + +HY C+VD+
Sbjct: 779 DSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDM 838
Query: 563 LGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFELEPENPGNY 622
L RAG L A + I+ MP+KP VW LL ACV+H N+E+GE AA L ELEPE+ Y
Sbjct: 839 LTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATY 898
Query: 623 VLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVRN 663
VLLS LY+ ++W + R M EKG++K P S IEV+N
Sbjct: 899 VLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKN 939
Score = 266 bits (679), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 178/552 (32%), Positives = 275/552 (49%), Gaps = 34/552 (6%)
Query: 66 LFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLA 125
+FDEM ER+ F +N ++K A + +F+ M+ P+ T+ V++AC
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVS-ENVTPNEGTFSGVLEAC---- 196
Query: 126 WRKLGIA------LHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVS 179
R +A +H R+L G T V N LI +Y G V AR+VFD + S
Sbjct: 197 -RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255
Query: 180 WNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVA 239
W +ISG KN EA+ +F M G+ P + SVL AC ++ +E+G +H LV
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 240 GGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALG 299
+ NALV +Y G++ A +F MS+RD VT+ ++ING + G A+
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375
Query: 300 LFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYA 359
LF+ M +G+ P+S T+ SL+ ACS+ L RG+ LHA+T K +E AL+++YA
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 360 KCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNS 419
KC ++ + F T + V WN +L R + +FRQM +E + PN T S
Sbjct: 436 KCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 495
Query: 420 LLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKD 479
+L L DL+ IH +I+ F V + LID+Y+K G L++A I I
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL--IRFAG 553
Query: 480 KDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDL 539
KD+V W+ +IAGY + + A++ F++M+ G++ +EV T+A+ AC+ L EG +
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 540 FNFMLENHQTC-----SRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHA----VWGA 590
+ Q C S +V L R G+++E+Y + + T A W A
Sbjct: 614 ------HAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-----LAFEQTEAGDNIAWNA 662
Query: 591 LLGACVIHGNVE 602
L+ GN E
Sbjct: 663 LVSGFQQSGNNE 674
Score = 252 bits (644), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 160/576 (27%), Positives = 274/576 (47%), Gaps = 19/576 (3%)
Query: 33 KQLHAFIITSGPLFTHLRSS------LVRAY---GHVSNVRILFDEMSERSSFLYNTVMK 83
+Q+HA I+ G LR S L+ Y G V R +FD + + + ++
Sbjct: 207 EQIHARILYQG-----LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 84 MYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFD 143
++N +++++F M LG P Y + V+ AC + ++G LHG VL GF
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLG-IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 144 MDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWM 203
DT+V N L+++Y + G + +A +F M + V++NTLI+G + Y ++A+ +F M
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 204 LKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSV 263
G+EPD ++ S++ AC + G+ +H N AL+++Y KC +
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 264 NEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSAC 323
A F +VV W M+ Y L D+RN+ +F+ MQ E + PN T S+L C
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 324 SSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWN 383
L L+ G +H+ IK N + V + LIDMYAK + ++ + R + K V W
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560
Query: 384 AILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRY 443
++AG KA+ FRQML + ++ L + + A A L L++ IH
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 620
Query: 444 GFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVS 503
GF S + L+ +YS+CG +E ++ F + D + W+ +++G+ G+ E A+
Sbjct: 621 GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN--IAWNALVSGFQQSGNNEEALR 678
Query: 504 LFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLL 563
+F M + G+ N TF SA+ A S + +G + + + S + ++ +
Sbjct: 679 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYD-SETEVCNALISMY 737
Query: 564 GRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHG 599
+ G + +A + K W A++ A HG
Sbjct: 738 AKCGSISDAEKQFLEVSTK-NEVSWNAIINAYSKHG 772
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 243/496 (48%), Gaps = 7/496 (1%)
Query: 9 LPKTTHLVIKLVQQYAATKSIAGTKQLHAFIITSGPLFTH-LRSSLVRAYGHVSNVRILF 67
L ++ + LV +A ++ +QLHA+ G + + +L+ Y +++
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 444
Query: 68 D---EMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDL 124
D E + L+N ++ Y +S ++F M ++ E P+ YTYP ++K C L
Sbjct: 445 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEIVPNQYTYPSILKTCIRL 503
Query: 125 AWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLI 184
+LG +H +++ T F ++ +V + LI MY G++ A + VVSW T+I
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 563
Query: 185 SGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLG 244
+GY + + +AL F ML G+ D + + + AC L+ ++ G+ IH
Sbjct: 564 AGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFS 623
Query: 245 KNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLM 304
++ NALV +Y +CG + E+ L F++ D + W ++++G+ +G+ AL +F M
Sbjct: 624 SDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM 683
Query: 305 QFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLV 364
EG+ N+ T GS + A S +K+G+ +HA K + E V ALI MYAKC +
Sbjct: 684 NREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSI 743
Query: 365 KLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAY 424
+ + F S K V WNAI+ +G +A++ F QM+ V PN TL +L A
Sbjct: 744 SDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSAC 803
Query: 425 AILADLQQAMN-IHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIV 483
+ + + + + YG E ++D+ ++ G L A + E+PIK D +
Sbjct: 804 SHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIK-PDAL 862
Query: 484 VWSVIIAGYGMHGHGE 499
VW +++ +H + E
Sbjct: 863 VWRTLLSACVVHKNME 878
Score = 206 bits (523), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 226/450 (50%), Gaps = 8/450 (1%)
Query: 130 GIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFK 189
G LH ++L G D + + L Y+ G++ A KVFD M E ++ +WN +I
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 163
Query: 190 NAYAKEALVVFDWMLKSGVEPDCASVVSVLPAC-GYLKEIEMGRMIHELVAGGRLGKNIA 248
E +F M+ V P+ + VL AC G ++ IH + L +
Sbjct: 164 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV 223
Query: 249 AWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEG 308
N L+D+Y + G V+ AR VFD + +D +W +MI+G + N A+ LF M G
Sbjct: 224 VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG 283
Query: 309 VRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSF 368
+ P S+LSAC + L+ G LH +K + V AL+ +Y + +
Sbjct: 284 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 369 QVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILA 428
+F+ S++ V +N ++ G G KA+ELF++M ++ +EP+ TL SL+ A +
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 429 DLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVI 488
L + +H Y + GF S ++ L+++Y+KC +E+A F E + +++V+W+V+
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV--ENVVLWNVM 461
Query: 489 IAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQ 548
+ YG+ + +F++M + PN+ T+ S L C G L+ G + + ++ +
Sbjct: 462 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII---K 518
Query: 549 TCSRADHYTC--IVDLLGRAGRLDEAYDLI 576
T + + Y C ++D+ + G+LD A+D++
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 191/450 (42%), Gaps = 57/450 (12%)
Query: 201 DWMLKSGVEPDCASVVSVLPAC----GYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDM 256
D + G+ P+ ++ +L C G L E GR +H + L N L D
Sbjct: 73 DSVENRGIRPNHQTLKWLLEGCLKTNGSLDE---GRKLHSQILKLGLDSNGCLSEKLFDF 129
Query: 257 YVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTI 316
Y+ G + A VFD M ER + TW MI A + GLF M E V PN T
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 317 GSLLSACSSLYYLKRGRS--------LHAWTIKQNLECEVIVETALIDMYAKCNLVKLSF 368
+L AC RG S +HA + Q L +V LID+Y++ V L+
Sbjct: 190 SGVLEAC-------RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLAR 242
Query: 369 QVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILA 428
+VF K W A+++G N +A+ LF M V + P +S+L A +
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 429 DLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVI 488
L+ +H +++ GF S V L+ +Y G+L SA IFS + +D V ++ +
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN--MSQRDAVTYNTL 360
Query: 489 IAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDL------FNF 542
I G G+GE A+ LFK M G++P+ T S + ACS G L G L F
Sbjct: 361 INGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGF 420
Query: 543 MLENHQTCSRADHYTCIVD---------------------LLGRAGRLDE---AYDLIRT 578
N + + Y D +L G LD+ ++ + R
Sbjct: 421 ASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ 480
Query: 579 MPLK---PTHAVWGALLGACVIHGNVELGE 605
M ++ P + ++L C+ G++ELGE
Sbjct: 481 MQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/618 (32%), Positives = 339/618 (54%), Gaps = 8/618 (1%)
Query: 51 SSLVRAYGHVSNVRI---LFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEY 107
SSLV Y + +F+ + E++ +N +++ YA NG SH +++F+ M G Y
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSG-Y 424
Query: 108 NPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARK 167
N D++T+ ++ C ++G H ++ + FVGN L+ MY G ++ AR+
Sbjct: 425 NIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQ 484
Query: 168 VFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKE 227
+F+ M + V+WNT+I Y ++ EA +F M G+ D A + S L AC ++
Sbjct: 485 IFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHG 544
Query: 228 IEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMING 287
+ G+ +H L L +++ ++L+DMY KCG + +AR VF + E VV+ ++I G
Sbjct: 545 LYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604
Query: 288 YALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECE 347
Y+ N ++ A+ LFQ M GV P+ +T +++ AC L G H K+ E
Sbjct: 605 YSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSE 663
Query: 348 -VIVETALIDMYAKCNLVKLSFQVFAR-TSKKKTVPWNAILAGCVHNGLARKAVELFRQM 405
+ +L+ MY + + +F+ +S K V W +++G NG +A++ +++M
Sbjct: 664 GEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM 723
Query: 406 LVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSL 465
+ V P+ AT ++L ++L+ L++ IH + S LID+Y+KCG +
Sbjct: 724 RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDM 783
Query: 466 ESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALH 525
+ + ++F E+ + ++V W+ +I GY +G+ E A+ +F M QS + P+E+TF L
Sbjct: 784 KGSSQVFDEMR-RRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLT 842
Query: 526 ACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTH 585
ACSH G + +G +F M+ + +R DH C+VDLLGR G L EA D I LKP
Sbjct: 843 ACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDA 902
Query: 586 AVWGALLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVM 645
+W +LLGAC IHG+ GE++A+ L ELEP+N YVLLS +Y++ W+ A +R VM
Sbjct: 903 RLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVM 962
Query: 646 DEKGLRKAPAHSLIEVRN 663
++G++K P +S I+V
Sbjct: 963 RDRGVKKVPGYSWIDVEQ 980
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/546 (29%), Positives = 277/546 (50%), Gaps = 5/546 (0%)
Query: 58 GHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIV 117
G + + R+LF EMS +N ++ + + G +++ F M R T V
Sbjct: 275 GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM-RKSSVKSTRSTLGSV 333
Query: 118 IKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSV 177
+ A +A LG+ +H + G + +VG+ L++MY +++AA KVF+A+ E +
Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
Query: 178 VSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHEL 237
V WN +I GY N + + + +F M SG D + S+L C ++EMG H +
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453
Query: 238 VAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNA 297
+ +L KN+ NALVDMY KCG++ +AR +F+RM +RD VTW ++I Y + + A
Sbjct: 454 IIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEA 513
Query: 298 LGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDM 357
LF+ M G+ + + S L AC+ ++ L +G+ +H ++K L+ ++ ++LIDM
Sbjct: 514 FDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDM 573
Query: 358 YAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATL 417
Y+KC ++K + +VF+ + V NA++AG N L +AV LF++ML V P++ T
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITF 632
Query: 418 NSLLPAYAILADLQQAMNIHCYLIRYGFLSVVE-VSTGLIDIYSKCGSLESAHKIFSEIP 476
+++ A L H + + GF S E + L+ +Y + A +FSE+
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS 692
Query: 477 IKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEG 536
K IV+W+ +++G+ +G E A+ +KEM GV P++ TF + L CS L EG
Sbjct: 693 -SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG 751
Query: 537 LDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACV 596
+ + + T ++D+ + G + + + M + W +L+
Sbjct: 752 RAIHSLIFHLAHDLDELTSNT-LIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYA 810
Query: 597 IHGNVE 602
+G E
Sbjct: 811 KNGYAE 816
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 237/456 (51%), Gaps = 8/456 (1%)
Query: 72 ERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGI 131
ER+S+ ++ MYA+ D+ ++F ++ +P+ + + + +
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIV-----DPNTVCWTCLFSGYVKAGLPEEAV 246
Query: 132 ALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNA 191
+ R+ G D +I Y+ G++K AR +F M VV+WN +ISG+ K
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 192 YAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWN 251
A+ F M KS V+ +++ SVL A G + +++G ++H L NI +
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 252 ALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRP 311
+LV MY KC + A VF+ + E++ V W +MI GYA NG+ + LF M+ G
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426
Query: 312 NSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVF 371
+ T SLLS C++ + L+ G H+ IK+ L + V AL+DMYAKC ++ + Q+F
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIF 486
Query: 372 ARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQ 431
R + V WN I+ V + +A +LF++M + + + A L S L A + L
Sbjct: 487 ERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLY 546
Query: 432 QAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAG 491
Q +HC ++ G + + LID+YSKCG ++ A K+FS +P + +V + +IAG
Sbjct: 547 QGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP--EWSVVSMNALIAG 604
Query: 492 YGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHAC 527
Y + + E AV LF+EM+ GV P+E+TF + + AC
Sbjct: 605 YSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 243/524 (46%), Gaps = 42/524 (8%)
Query: 58 GHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIV 117
VS FD + E+ +N+++ MY+ G L+ F+ + + P+ +T+ IV
Sbjct: 109 AQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFE-NQIFPNKFTFSIV 166
Query: 118 IKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSV 177
+ C + G +H ++ G + +++ G L+ MY + AR+VF+ + + +
Sbjct: 167 LSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNT 226
Query: 178 VSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHEL 237
V W L SGY K +EA++VF+ M G PD + V+V
Sbjct: 227 VCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV------------------- 267
Query: 238 VAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNA 297
++ Y++ G + +ARL+F MS DVV W MI+G+ G A
Sbjct: 268 ----------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVA 311
Query: 298 LGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDM 357
+ F M+ V+ T+GS+LSA + L G +HA IK L + V ++L+ M
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 358 YAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATL 417
Y+KC ++ + +VF +K V WNA++ G HNG + K +ELF M +D T
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 418 NSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPI 477
SLL A DL+ H +I+ + V L+D+Y+KCG+LE A +IF +
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC- 490
Query: 478 KDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGL 537
D+D V W+ II Y + A LFK M G+ + S L AC+H L +G
Sbjct: 491 -DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549
Query: 538 DLFNFMLENHQTCSRADHY-TCIVDLLGRAGRLDEAYDLIRTMP 580
+ L R H + ++D+ + G + +A + ++P
Sbjct: 550 QV--HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 245/542 (45%), Gaps = 52/542 (9%)
Query: 66 LFDEMS--ERSSFLYNTVMKMYAQNGASHDS-----LKMFLGMLRLGEYNPDNYTYPIVI 118
+FD S R S+ + ++Y SHD L++ LG +L + P +
Sbjct: 13 MFDSFSFVRRLSYSPDLGRRIYGHVLPSHDQIHQRLLEICLGQCKLFKSRKVFDEMPQRL 72
Query: 119 KACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVV 178
LA R +G A+H + LI G D + +GN ++ +Y +V A K FD + E V
Sbjct: 73 A----LALR-IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVT 126
Query: 179 SWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELV 238
+WN+++S Y + L F + ++ + P+ + VL C +E GR IH +
Sbjct: 127 AWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM 186
Query: 239 AGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNAL 298
L +N ALVDMY KC +++AR VF+ + + + V WT + +GY G A+
Sbjct: 187 IKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAV 246
Query: 299 GLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMY 358
+F+ M+ EG RP+ L ++++ L LK R L
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLL----------------------- 283
Query: 359 AKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLN 418
F S V WN +++G G A+E F M V+ +TL
Sbjct: 284 ------------FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLG 331
Query: 419 SLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIK 478
S+L A I+A+L + +H I+ G S + V + L+ +YSKC +E+A K+F ++
Sbjct: 332 SVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE--ALE 389
Query: 479 DKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLD 538
+K+ V W+ +I GY +G + LF +M SG ++ TFTS L C+ L+ G
Sbjct: 390 EKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-S 448
Query: 539 LFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIH 598
F+ ++ + +VD+ + G L++A + M + W ++G+ V
Sbjct: 449 QFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGSYVQD 507
Query: 599 GN 600
N
Sbjct: 508 EN 509
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Query: 421 LPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDK 480
+P LA L+ +H + G S + ++D+Y+KC + A K F + +K
Sbjct: 68 MPQRLALA-LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL---EK 123
Query: 481 DIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLF 540
D+ W+ +++ Y G + F + ++ + PN+ TF+ L C+ ++ G +
Sbjct: 124 DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIH 183
Query: 541 NFM----LENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACV 596
M LE + C A +VD+ + R+ +A + + + P W C+
Sbjct: 184 CSMIKMGLERNSYCGGA-----LVDMYAKCDRISDARRVFEWI-VDPNTVCW-----TCL 232
Query: 597 IHGNVELG-EVAAKWLFEL---EPENPGNYVLLSKLYSAVR--RWKDA 638
G V+ G A +FE E P + ++ + + +R + KDA
Sbjct: 233 FSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDA 280
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/549 (34%), Positives = 309/549 (56%), Gaps = 6/549 (1%)
Query: 117 VIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHS 176
+++ CT G +H +L +G ++ N LI MY E A KVFD+M E +
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 177 VVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHE 236
VVSW+ L+SG+ N K +L +F M + G+ P+ + + L ACG L +E G IH
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 237 LVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRN 296
+ N+LVDMY KCG +NEA VF R+ +R +++W +MI G+ G
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 297 ALGLFQLMQFEGV--RPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLEC--EVIVET 352
AL F +MQ + RP+ T+ SLL ACSS + G+ +H + ++ C +
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 353 ALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEP 412
+L+D+Y KC + + + F + +K + W++++ G G +A+ LF+++ +
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI 311
Query: 413 NDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIF 472
+ L+S++ +A A L+Q + ++ V ++D+Y KCG ++ A K F
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF 371
Query: 473 SEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGL 532
+E+ +KD ++ W+V+I GYG HG G+ +V +F EM++ ++P+EV + + L ACSH G+
Sbjct: 372 AEMQLKD--VISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGM 429
Query: 533 LDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALL 592
+ EG +LF+ +LE H R +HY C+VDLLGRAGRL EA LI TMP+KP +W LL
Sbjct: 430 IKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
Query: 593 GACVIHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRK 652
C +HG++ELG+ K L ++ +NP NYV++S LY W + N R++ + KGL+K
Sbjct: 490 SLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKK 549
Query: 653 APAHSLIEV 661
S +E+
Sbjct: 550 EAGMSWVEI 558
Score = 228 bits (582), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 247/472 (52%), Gaps = 11/472 (2%)
Query: 34 QLHAFIITSGPLFTHLRSS-LVRAYGHVSNVRI---LFDEMSERSSFLYNTVMKMYAQNG 89
Q+H +++ SG + S+ L+ Y + +FD M ER+ ++ +M + NG
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 90 ASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVG 149
SL +F M R G Y P+ +T+ +KAC L + G+ +HG L GF+M VG
Sbjct: 87 DLKGSLSLFSEMGRQGIY-PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVG 145
Query: 150 NCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVE 209
N L+ MY G + A KVF + + S++SWN +I+G+ Y +AL F M ++ ++
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 210 --PDCASVVSVLPACGYLKEIEMGRMIHELV--AGGRLGKNIAAWNALVDMYVKCGSVNE 265
PD ++ S+L AC I G+ IH + +G + +LVD+YVKCG +
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 266 ARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSS 325
AR FD++ E+ +++W+S+I GYA G+ A+GLF+ +Q + +S + S++ +
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFAD 325
Query: 326 LYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAI 385
L++G+ + A +K E V +++DMY KC LV + + FA K + W +
Sbjct: 326 FALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVV 385
Query: 386 LAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIR-YG 444
+ G +GL +K+V +F +ML +EP++ ++L A + +++ + L+ +G
Sbjct: 386 ITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHG 445
Query: 445 FLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHG 496
VE ++D+ + G L+ A + +PIK ++ +W +++ +HG
Sbjct: 446 IKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIK-PNVGIWQTLLSLCRVHG 496
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 229/472 (48%), Gaps = 43/472 (9%)
Query: 214 SVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRM 273
++VS+L C + G +H + G N+ N L+DMY KC A VFD M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 274 SERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGR 333
ER+VV+W+++++G+ LNGD++ +L LF M +G+ PN T + L AC L L++G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 334 SLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNG 393
+H + +K E V V +L+DMY+KC + + +VF R + + WNA++AG VH G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 394 LARKAVELFRQMLVEVVE--PNDATLNSLLPAYAILADLQQAMNIHCYLIRYGF--LSVV 449
KA++ F M ++ P++ TL SLL A + + IH +L+R GF S
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 450 EVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMV 509
++ L+D+Y KCG L SA K F + IK+K ++ WS +I GY G A+ LFK +
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQ--IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 510 QSGVQPNEVTFTSALHACSHGGLLDEGLDL---------------FNFMLENHQTCSRAD 554
+ Q + +S + + LL +G + N +++ + C D
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 555 H---------------YTCIVDLLGRAGRLDEA----YDLIRTMPLKPTHAVWGALLGAC 595
+T ++ G+ G ++ Y+++R ++P + A+L AC
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH-NIEPDEVCYLAVLSAC 424
Query: 596 VIHGNVELGEVAAKWLFELEPENP--GNYVLLSKLYSAVRRWKDAENVRDVM 645
G ++ GE L E P +Y + L R K+A+++ D M
Sbjct: 425 SHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM 476
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 146/286 (51%), Gaps = 13/286 (4%)
Query: 19 LVQQYAATKSIAGTKQLHAFIITSG---PLFTHLRSSLVRAY---GHVSNVRILFDEMSE 72
L++ ++T I KQ+H F++ SG P + SLV Y G++ + R FD++ E
Sbjct: 216 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE 275
Query: 73 RSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNP--DNYTYPIVIKACTDLAWRKLG 130
++ +++++ YAQ G +++ +F RL E N D++ +I D A + G
Sbjct: 276 KTMISWSSLILGYAQEGEFVEAMGLF---KRLQELNSQIDSFALSSIIGVFADFALLRQG 332
Query: 131 IALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKN 190
+ + ++T V N ++ MY+ G V A K F M V+SW +I+GY K+
Sbjct: 333 KQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKH 392
Query: 191 AYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMG-RMIHELVAGGRLGKNIAA 249
K+++ +F ML+ +EPD ++VL AC + I+ G + +L+ + +
Sbjct: 393 GLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEH 452
Query: 250 WNALVDMYVKCGSVNEARLVFDRMS-ERDVVTWTSMINGYALNGDV 294
+ +VD+ + G + EA+ + D M + +V W ++++ ++GD+
Sbjct: 453 YACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDI 498
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/637 (32%), Positives = 347/637 (54%), Gaps = 23/637 (3%)
Query: 34 QLHAFIITSGPLFTHLRS------SLVRAYGHVSNVRILFDEMSERSSFLYNTVMKMYAQ 87
Q+H F TSG FT + R G N +F+ + + +NT++ +
Sbjct: 97 QIHGFSTTSG--FTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD 154
Query: 88 NGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTF 147
N + + F+ ++ D +TY + C LG+ L V+ TG + D
Sbjct: 155 NQIALN----FVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLV 210
Query: 148 VGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNA-YAKEALVVFDWMLKS 206
VGN I MY G + AR+VFD M ++SWN+L+SG + + EA+V+F M++
Sbjct: 211 VGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMRE 270
Query: 207 GVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEA 266
GVE D S SV+ C + ++++ R IH L + N L+ Y KCG +
Sbjct: 271 GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAV 330
Query: 267 RLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSL 326
+ VF +MSER+VV+WT+MI+ N D +A+ +F M+F+GV PN +T L++A
Sbjct: 331 KSVFHQMSERNVVSWTTMISS---NKD--DAVSIFLNMRFDGVYPNEVTFVGLINAVKCN 385
Query: 327 YYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAIL 386
+K G +H IK E V + I +YAK ++ + + F + ++ + WNA++
Sbjct: 386 EQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMI 445
Query: 387 AGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADL--QQAMNIHCYLIRYG 444
+G NG + +A+++F E + PN+ T S+L A A D+ +Q H +L++ G
Sbjct: 446 SGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLG 504
Query: 445 FLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSL 504
S VS+ L+D+Y+K G+++ + K+F+E+ K++ VW+ II+ Y HG ET ++L
Sbjct: 505 LNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQ--FVWTSIISAYSSHGDFETVMNL 562
Query: 505 FKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLG 564
F +M++ V P+ VTF S L AC+ G++D+G ++FN M+E + +HY+C+VD+LG
Sbjct: 563 FHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLG 622
Query: 565 RAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFELEPENPGNYVL 624
RAGRL EA +L+ +P P ++ ++LG+C +HGNV++G A+ E++PE G+YV
Sbjct: 623 RAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQ 682
Query: 625 LSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEV 661
+ +Y+ W A +R M +K + K S I+V
Sbjct: 683 MYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDV 719
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 152/556 (27%), Positives = 264/556 (47%), Gaps = 47/556 (8%)
Query: 66 LFDEMSER--SSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNP--DNYTYPIVIKAC 121
LFD S+R ++ + +++ + +N + +L +F L+LG + D T + +KAC
Sbjct: 30 LFDGSSQRNATTSINHSISESLRRNSPAR-ALSIFKENLQLGYFGRHMDEVTLCLALKAC 88
Query: 122 T-DLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSW 180
DL K G +HG +GF V N ++ MY G A +F+ + + VVSW
Sbjct: 89 RGDL---KRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSW 145
Query: 181 NTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAG 240
NT++SG+ N A +V M +GV D + + L C + +G + V
Sbjct: 146 NTILSGFDDNQIALNFVV---RMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVK 202
Query: 241 GRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVR-NALG 299
L ++ N+ + MY + GS AR VFD MS +D+++W S+++G + G A+
Sbjct: 203 TGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVV 262
Query: 300 LFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYA 359
+F+ M EGV + ++ S+++ C LK R +H IK+ E + V L+ Y+
Sbjct: 263 IFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYS 322
Query: 360 KCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNS 419
KC +++ VF + S++ V W +++ + AV +F M + V PN+ T
Sbjct: 323 KCGVLEAVKSVFHQMSERNVVSWTTMISSNKDD-----AVSIFLNMRFDGVYPNEVTFVG 377
Query: 420 LLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKD 479
L+ A +++ + IH I+ GF+S V I +Y+K +LE A K F +I
Sbjct: 378 LINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITF-- 435
Query: 480 KDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACS----------- 528
++I+ W+ +I+G+ +G A+ +F + PNE TF S L+A +
Sbjct: 436 REIISWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFAEDISVKQGQ 494
Query: 529 --HGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHA 586
H LL GL+ +C + ++D+ + G +DE+ + M K
Sbjct: 495 RCHAHLLKLGLN----------SCPVVS--SALLDMYAKRGNIDESEKVFNEMSQK-NQF 541
Query: 587 VWGALLGACVIHGNVE 602
VW +++ A HG+ E
Sbjct: 542 VWTSIISAYSSHGDFE 557
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust.
Identities = 225/666 (33%), Positives = 358/666 (53%), Gaps = 19/666 (2%)
Query: 10 PKTTHLVIKLVQQYAATKSIAGTKQLHAFIITSG-PLFTHLRSSLVRAY---GHVSNVRI 65
P T+ L+ KL +AG + +H II +G + LV Y G ++
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAG-RAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHS 70
Query: 66 LFDEMSERSSFLYNTVMKMYAQNG---ASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACT 122
+F+ + + +N+++ Y+QNG +S+ +++F M R + P+ YT + KA +
Sbjct: 71 IFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREM-RAQDILPNAYTLAGIFKAES 129
Query: 123 DLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNT 182
L +G H V+ D +V L+ MY G V+ KVF M E + +W+T
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 183 LISGYFKNAYAKEALVVFDWMLKS---GVEPD--CASVVSVLPACGYLKEIEMGRMIHEL 237
++SGY +EA+ VF+ L+ G + D +V+S L A Y + +GR IH +
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIY---VGLGRQIHCI 246
Query: 238 VAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNA 297
L +A NALV MY KC S+NEA +FD +R+ +TW++M+ GY+ NG+ A
Sbjct: 247 TIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEA 306
Query: 298 LGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDM 357
+ LF M G++P+ TI +L+ACS + YL+ G+ LH++ +K E + TAL+DM
Sbjct: 307 VKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDM 366
Query: 358 YAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATL 417
YAK + + + F ++ W ++++G V N +A+ L+R+M + PND T+
Sbjct: 367 YAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTM 426
Query: 418 NSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPI 477
S+L A + LA L+ +H + I++GF V + + L +YSKCGSLE + +F P
Sbjct: 427 ASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP- 485
Query: 478 KDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGL 537
+KD+V W+ +I+G +G G+ A+ LF+EM+ G++P++VTF + + ACSH G ++ G
Sbjct: 486 -NKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGW 544
Query: 538 DLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVI 597
FN M + + DHY C+VDLL RAG+L EA + I + + +W LL AC
Sbjct: 545 FYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKN 604
Query: 598 HGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHS 657
HG ELG A + L L YV LS +Y+A+ R +D E V M G+ K S
Sbjct: 605 HGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCS 664
Query: 658 LIEVRN 663
IE++N
Sbjct: 665 WIELKN 670
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 211/411 (51%), Gaps = 23/411 (5%)
Query: 204 LKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSV 263
++ + P ++++ L + + GR +H + I N LV+ Y KCG +
Sbjct: 6 FQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65
Query: 264 NEARLVFDRMSERDVVTWTSMINGYALNGDVRNA---LGLFQLMQFEGVRPNSLTIGSLL 320
+A +F+ + +DVV+W S+I GY+ NG + ++ + LF+ M+ + + PN+ T+ +
Sbjct: 66 AKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIF 125
Query: 321 SACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTV 380
A SSL GR HA +K + ++ V+T+L+ MY K LV+ +VFA ++ T
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTY 185
Query: 381 PWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDA--TLNSLLPAYAILADLQQAMNIHC 438
W+ +++G G +A+++F L E E +D+ ++L + A + IHC
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHC 245
Query: 439 YLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHG 498
I+ G L V +S L+ +YSKC SL A K+F D++ + WS ++ GY +G
Sbjct: 246 ITIKNGLLGFVALSNALVTMYSKCESLNEACKMFD--SSGDRNSITWSAMVTGYSQNGES 303
Query: 499 ETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFML----ENHQTCSRAD 554
AV LF M +G++P+E T L+ACS L+EG L +F+L E H +
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFAT--- 360
Query: 555 HYTCIVDLLGRAGRLDEA---YDLIRTMPLKPTHAVWGALLGACVIHGNVE 602
T +VD+ +AG L +A +D ++ + A+W +L+ V + + E
Sbjct: 361 --TALVDMYAKAGCLADARKGFDCLQERDV----ALWTSLISGYVQNSDNE 405
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/607 (34%), Positives = 353/607 (58%), Gaps = 12/607 (1%)
Query: 63 VRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACT 122
VR +FD M ++ +NT++ Y + G + ++ + F M+R+ E P ++ V A +
Sbjct: 167 VRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRM-EVKPSPVSFVNVFPAVS 225
Query: 123 DLAWRKLGIALHGRVLITG--FDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSW 180
K +G +L G + D FV + I+MY G+++++R+VFD+ E ++ W
Sbjct: 226 ISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVW 285
Query: 181 NTLISGYFKNAYAKEALVVFDWMLKSG-VEPDCASVVSVLPACGYLKEIEMGRMIHELVA 239
NT+I Y +N E++ +F + S + D + + A L+++E+GR H V+
Sbjct: 286 NTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVS 345
Query: 240 GGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALG 299
I N+L+ MY +CGSV+++ VF M ERDVV+W +MI+ + NG L
Sbjct: 346 KNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLM 405
Query: 300 LFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYA 359
L MQ +G + + +T+ +LLSA S+L + G+ HA+ I+Q ++ E + + LIDMY+
Sbjct: 406 LVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYS 464
Query: 360 KCNLVKLSFQVFART--SKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATL 417
K L+++S ++F + +++ WN++++G NG K +FR+ML + + PN T+
Sbjct: 465 KSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTV 524
Query: 418 NSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPI 477
S+LPA + + + +H + IR V V++ L+D+YSK G+++ A +FS+
Sbjct: 525 ASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQT-- 582
Query: 478 KDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGL 537
K+++ V ++ +I GYG HG GE A+SLF M +SG++P+ +TF + L ACS+ GL+DEGL
Sbjct: 583 KERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGL 642
Query: 538 DLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHA-VWGALLGACV 596
+F M E + ++HY CI D+LGR GR++EAY+ ++ + + A +WG+LLG+C
Sbjct: 643 KIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCK 702
Query: 597 IHGNVELGEVAAKWL--FELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAP 654
+HG +EL E ++ L F+ G VLLS +Y+ ++WK + VR M EKGL+K
Sbjct: 703 LHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEV 762
Query: 655 AHSLIEV 661
S IE+
Sbjct: 763 GRSGIEI 769
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 167/589 (28%), Positives = 288/589 (48%), Gaps = 22/589 (3%)
Query: 41 TSGPLFTHLRSSLVR--AYGHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMF 98
T P +RS L + G+ R LFD + + ++ L+NT++ + N H++L +
Sbjct: 34 TLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFY 93
Query: 99 LGMLRLGEY-NPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYM 157
M + + N D YTY +KAC + K G A+H ++ + V N L+ MY+
Sbjct: 94 SRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYV 153
Query: 158 ------NFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPD 211
+ E RKVFD M +VV+WNTLIS Y K EA F M++ V+P
Sbjct: 154 SCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPS 213
Query: 212 CASVVSVLPACGYLKEIEMGRMIHELV--AGGRLGKNIAAWNALVDMYVKCGSVNEARLV 269
S V+V PA + I+ + + L+ G K++ ++ + MY + G + +R V
Sbjct: 214 PVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRV 273
Query: 270 FDRMSERDVVTWTSMINGYALNGDVRNALGLF-QLMQFEGVRPNSLTIGSLLSACSSLYY 328
FD ER++ W +MI Y N + ++ LF + + + + + +T SA S+L
Sbjct: 274 FDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQ 333
Query: 329 LKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAG 388
++ GR H + K E +++ +L+ MY++C V SF VF ++ V WN +++
Sbjct: 334 VELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISA 393
Query: 389 CVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSV 448
V NGL + + L +M + + + T+ +LL A + L + + H +LIR G +
Sbjct: 394 FVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG-IQF 452
Query: 449 VEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEM 508
+++ LID+YSK G + + K+F ++D W+ +I+GY +GH E +F++M
Sbjct: 453 EGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKM 512
Query: 509 VQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENH--QTCSRADHYTCIVDLLGRA 566
++ ++PN VT S L ACS G +D G L F + + Q A + +VD+ +A
Sbjct: 513 LEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVA---SALVDMYSKA 569
Query: 567 GRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFELE 615
G + A D+ + + +LG +G +GE A ++
Sbjct: 570 GAIKYAEDMFSQTKERNSVTYTTMILG----YGQHGMGERAISLFLSMQ 614
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 236/463 (50%), Gaps = 6/463 (1%)
Query: 52 SLVRAYGHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDN 111
S+ G + + R +FD ER+ ++NT++ +Y QN +S+++FL + E D
Sbjct: 259 SMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDE 318
Query: 112 YTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDA 171
TY + A + L +LG HG V ++ + N L+ MY G V + VF +
Sbjct: 319 VTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLS 378
Query: 172 MWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMG 231
M E VVSWNT+IS + +N E L++ M K G + D +V ++L A L+ E+G
Sbjct: 379 MRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIG 438
Query: 232 RMIHELVAGGRLGKNIAAWNA-LVDMYVKCGSVNEARLVFDR--MSERDVVTWTSMINGY 288
+ H + R G N+ L+DMY K G + ++ +F+ +ERD TW SMI+GY
Sbjct: 439 KQTHAFLI--RQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGY 496
Query: 289 ALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEV 348
NG +F+ M + +RPN++T+ S+L ACS + + G+ LH ++I+Q L+ V
Sbjct: 497 TQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNV 556
Query: 349 IVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVE 408
V +AL+DMY+K +K + +F++T ++ +V + ++ G +G+ +A+ LF M
Sbjct: 557 FVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQES 616
Query: 409 VVEPNDATLNSLLPAYAILADLQQAMNIHCYLIR-YGFLSVVEVSTGLIDIYSKCGSLES 467
++P+ T ++L A + + + + I + Y E + D+ + G +
Sbjct: 617 GIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNE 676
Query: 468 AHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQ 510
A++ + + +W ++ +HG E A ++ + + +
Sbjct: 677 AYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAK 719
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 166/307 (54%), Gaps = 8/307 (2%)
Query: 24 AATKSIAGTKQLHAFIITS-GPLFTHLRSSLVRAYGHVSNVRI---LFDEMSERSSFLYN 79
+A + + +Q H F+ + L + +SL+ Y +V +F M ER +N
Sbjct: 329 SALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWN 388
Query: 80 TVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLI 139
T++ + QNG + L + M + G + D T ++ A ++L +++G H ++
Sbjct: 389 TMISAFVQNGLDDEGLMLVYEMQKQG-FKIDYITVTALLSAASNLRNKEIGKQTHAFLIR 447
Query: 140 TGFDMDTFVGNCLIAMYMNFGEVKAARKVFDA--MWEHSVVSWNTLISGYFKNAYAKEAL 197
G + + + LI MY G ++ ++K+F+ E +WN++ISGY +N + ++
Sbjct: 448 QGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTF 506
Query: 198 VVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMY 257
+VF ML+ + P+ +V S+LPAC + +++G+ +H L +N+ +ALVDMY
Sbjct: 507 LVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMY 566
Query: 258 VKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIG 317
K G++ A +F + ER+ VT+T+MI GY +G A+ LF MQ G++P+++T
Sbjct: 567 SKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFV 626
Query: 318 SLLSACS 324
++LSACS
Sbjct: 627 AVLSACS 633
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 362 bits (929), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 214/668 (32%), Positives = 366/668 (54%), Gaps = 19/668 (2%)
Query: 6 HHTLPKTTHLVIKLVQQYAATKSIAGTKQ-------LHAFIITSG-PLFTHLRSSLVRAY 57
+H L T + K V + ++ AG+++ +H II G + +SL+ Y
Sbjct: 88 YHRLVSETTQISKFVFP-SVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMY 146
Query: 58 GHVSNV---RILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTY 114
G N+ +FD M R ++T++ +NG +L+MF M+ G PD T
Sbjct: 147 GQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDG-VEPDAVTM 205
Query: 115 PIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWE 174
V++ C +L ++ ++HG++ FD+D + N L+ MY G++ ++ ++F+ + +
Sbjct: 206 ISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAK 265
Query: 175 HSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMI 234
+ VSW +IS Y + ++++AL F M+KSG+EP+ ++ SVL +CG + I G+ +
Sbjct: 266 KNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSV 325
Query: 235 HELVAGGRLGKNIAAWN-ALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGD 293
H L N + + ALV++Y +CG +++ V +S+R++V W S+I+ YA G
Sbjct: 326 HGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGM 385
Query: 294 VRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETA 353
V ALGLF+ M + ++P++ T+ S +SAC + + G+ +H I+ ++ E V+ +
Sbjct: 386 VIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNS 444
Query: 354 LIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPN 413
LIDMY+K V + VF + + V WN++L G NG + +A+ LF M +E N
Sbjct: 445 LIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMN 504
Query: 414 DATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFS 473
+ T +++ A + + L++ +H LI G L + T LID+Y+KCG L +A +F
Sbjct: 505 EVTFLAVIQACSSIGSLEKGKWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNAAETVFR 563
Query: 474 EIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLL 533
+ + IV WS +I YGMHG +A+S F +MV+SG +PNEV F + L AC H G +
Sbjct: 564 --AMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSV 621
Query: 534 DEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLG 593
+EG FN M ++ ++H+ C +DLL R+G L EAY I+ MP +VWG+L+
Sbjct: 622 EEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVN 680
Query: 594 ACVIHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKA 653
C IH +++ + L ++ ++ G Y LLS +Y+ W++ +R M L+K
Sbjct: 681 GCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKV 740
Query: 654 PAHSLIEV 661
P +S IE+
Sbjct: 741 PGYSAIEI 748
Score = 253 bits (645), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 159/564 (28%), Positives = 295/564 (52%), Gaps = 13/564 (2%)
Query: 23 YAATKSIAGTKQLHAFIITSGPLFTHLR--SSLVRAY---GHVSNVRILFDEMSERSSFL 77
+ + S+ QLHA ++ +G L + L+ +Y G + R++F+ SF+
Sbjct: 8 FRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFM 67
Query: 78 YNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACT-DLAWRKLGIALHGR 136
Y ++K ++ ++ ++ + +P V++AC +G +HGR
Sbjct: 68 YGVLIKCNVWCHLLDAAIDLYHRLVS-ETTQISKFVFPSVLRACAGSREHLSVGGKVHGR 126
Query: 137 VLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEA 196
++ G D D + L+ MY G + A KVFD M +V+W+TL+S +N +A
Sbjct: 127 IIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKA 186
Query: 197 LVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDM 256
L +F M+ GVEPD +++SV+ C L + + R +H + + N+L+ M
Sbjct: 187 LRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTM 246
Query: 257 YVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTI 316
Y KCG + + +F+++++++ V+WT+MI+ Y AL F M G+ PN +T+
Sbjct: 247 YSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTL 306
Query: 317 GSLLSACSSLYYLKRGRSLHAWTIKQNLECEV-IVETALIDMYAKCNLVKLSFQVFARTS 375
S+LS+C + ++ G+S+H + +++ L+ + AL+++YA+C + V S
Sbjct: 307 YSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVS 366
Query: 376 KKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMN 435
+ V WN++++ H G+ +A+ LFRQM+ + ++P+ TL S + A +
Sbjct: 367 DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQ 426
Query: 436 IHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMH 495
IH ++IR +S V LID+YSK GS++SA +F++ IK + +V W+ ++ G+ +
Sbjct: 427 IHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTVFNQ--IKHRSVVTWNSMLCGFSQN 483
Query: 496 GHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADH 555
G+ A+SLF M S ++ NEVTF + + ACS G L++G + + ++ + D
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTD- 542
Query: 556 YTCIVDLLGRAGRLDEAYDLIRTM 579
T ++D+ + G L+ A + R M
Sbjct: 543 -TALIDMYAKCGDLNAAETVFRAM 565
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 362 bits (929), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 210/621 (33%), Positives = 341/621 (54%), Gaps = 17/621 (2%)
Query: 52 SLVRAYGHVSNVRILFDEM---SERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYN 108
SL G + +F+ M +R ++ +M Y NG D++K+F+ L LG
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG-LV 163
Query: 109 PDNYTYPIVIKACTDLAWRKLGIALHGRVLITG-FDMDTFVGNCLIAMYMNFGE--VKAA 165
P++Y Y VI+AC++ + +G G ++ TG F+ D VG LI M++ GE + A
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENA 222
Query: 166 RKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYL 225
KVFD M E +VV+W +I+ + + +EA+ F M+ SG E D ++ SV AC L
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282
Query: 226 KEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKC---GSVNEARLVFDRMSERDVVTWT 282
+ + +G+ +H L ++ +LVDMY KC GSV++ R VFDRM + V++WT
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 283 SMINGYALNGDV-RNALGLFQLMQFEG-VRPNSLTIGSLLSACSSLYYLKRGRSLHAWTI 340
++I GY N ++ A+ LF M +G V PN T S AC +L + G+ +
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 341 KQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVE 400
K+ L V ++I M+ K + ++ + + F S+K V +N L G N +A +
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFK 460
Query: 401 LFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYS 460
L ++ + + T SLL A + +++ IH +++ G V LI +YS
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS 520
Query: 461 KCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTF 520
KCGS+++A ++F+ +++++++ W+ +I G+ HG + F +M++ GV+PNEVT+
Sbjct: 521 KCGSIDTASRVFN--FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 578
Query: 521 TSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMP 580
+ L ACSH GL+ EG FN M E+H+ + +HY C+VDLL RAG L +A++ I TMP
Sbjct: 579 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 638
Query: 581 LKPTHAVWGALLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAEN 640
+ VW LGAC +H N ELG++AA+ + EL+P P Y+ LS +Y+ +W+++
Sbjct: 639 FQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTE 698
Query: 641 VRDVMDEKGLRKAPAHSLIEV 661
+R M E+ L K S IEV
Sbjct: 699 MRRKMKERNLVKEGGCSWIEV 719
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 141/511 (27%), Positives = 250/511 (48%), Gaps = 20/511 (3%)
Query: 101 MLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFG 160
M R G D+ T+ ++K+C +LG +H R++ + D+ + N LI++Y G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 161 EVKAARKVFDAMW---EHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVS 217
+ A VF+ M + VVSW+ +++ Y N +A+ VF L+ G+ P+ +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 218 VLPACGYLKEIEMGRM-IHELVAGGRLGKNIAAWNALVDMYVKC-GSVNEARLVFDRMSE 275
V+ AC + +GR+ + L+ G ++ +L+DM+VK S A VFD+MSE
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 276 RDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSL 335
+VVTWT MI G R A+ F M G + T+ S+ SAC+ L L G+ L
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 336 HAWTIKQNLECEVIVETALIDMYAKCNL---VKLSFQVFARTSKKKTVPWNAILAGCVHN 392
H+W I+ L + VE +L+DMYAKC+ V +VF R + W A++ G + N
Sbjct: 292 HSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 393 -GLARKAVELFRQMLVEV-VEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVE 450
LA +A+ LF +M+ + VEPN T +S A L+D + + + G S
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 409
Query: 451 VSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQ 510
V+ +I ++ K +E A + F + +K++V ++ + G + + E A L E+ +
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFE--SLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 511 SGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTC--IVDLLGRAGR 568
+ + TF S L ++ G + +G + + +++ +C++ C ++ + + G
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP---VCNALISMYSKCGS 524
Query: 569 LDEAYDLIRTMPLKPTHAVWGALLGACVIHG 599
+D A + M + + W +++ HG
Sbjct: 525 IDTASRVFNFMENRNVIS-WTSMITGFAKHG 554
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 154/314 (49%), Gaps = 23/314 (7%)
Query: 292 GDVRNALGLFQLMQFEGVRP-NSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIV 350
GD+R A+ LM +G+RP +S+T SLL +C + G+ +HA I+ ++E + ++
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 351 ETALIDMYAKCN---LVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLV 407
+LI +Y+K + F+ R K+ V W+A++A +NG A+++F + L
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 408 EVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYG-FLSVVEVSTGLIDIYSKC-GSL 465
+ PND +++ A + + +L++ G F S V V LID++ K S
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219
Query: 466 ESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALH 525
E+A+K+F + + + ++V W+++I G A+ F +MV SG + ++ T +S
Sbjct: 220 ENAYKVFDK--MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFS 277
Query: 526 ACSHGGLLDEGLDLFNFMLE----NHQTCSRADHYT-CIVDLLGRAGRLDEAYDLIRTMP 580
AC+ L G L ++ + + CS D Y C D G +D+ + M
Sbjct: 278 ACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSAD-----GSVDDCRKVFDRM- 331
Query: 581 LKPTHAV--WGALL 592
H+V W AL+
Sbjct: 332 --EDHSVMSWTALI 343
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 361 bits (927), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 197/608 (32%), Positives = 328/608 (53%), Gaps = 6/608 (0%)
Query: 58 GHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYN-PDNYTYPI 116
G VS+ R LFD M +R+ + +M YA+N ++ K+F M R PD+ T+
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 117 VIKACTDLAWRKLGIALHGRVLITGFDMDTF--VGNCLIAMYMNFGEVKAARKVFDAMWE 174
++ C D + +H + GFD + F V N L+ Y + A +F+ + E
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 175 HSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMI 234
V++NTLI+GY K+ E++ +F M +SG +P + VL A L + +G+ +
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 235 HELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDV 294
H L ++ + N ++D Y K V E R++FD M E D V++ +I+ Y+
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 295 RNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETAL 354
+L F+ MQ G + ++LS ++L L+ GR LH + + + V +L
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSL 392
Query: 355 IDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPND 414
+DMYAKC + + + +F ++ TV W A+++G V GL ++LF +M + +
Sbjct: 393 VDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQ 452
Query: 415 ATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSE 474
+T ++L A A A L +H ++IR G L V +GL+D+Y+KCGS++ A ++F E
Sbjct: 453 STFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEE 512
Query: 475 IPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLD 534
+P D++ V W+ +I+ + +G GE A+ F +M++SG+QP+ V+ L ACSH G ++
Sbjct: 513 MP--DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVE 570
Query: 535 EGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGA 594
+G + F M + + HY C++DLLGR GR EA L+ MP +P +W ++L A
Sbjct: 571 QGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
Query: 595 CVIHGNVELGEVAAKWLFELEP-ENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKA 653
C IH N L E AA+ LF +E + YV +S +Y+A W+ +V+ M E+G++K
Sbjct: 631 CRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKV 690
Query: 654 PAHSLIEV 661
PA+S +EV
Sbjct: 691 PAYSWVEV 698
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/483 (25%), Positives = 226/483 (46%), Gaps = 16/483 (3%)
Query: 145 DTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWML 204
+T N +I+ ++ G+V +AR +FDAM + +VV+W L+ Y +N++ EA +F M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 205 KSG--VEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKN--IAAWNALVDMYVKC 260
+S PD + ++LP C +H N + N L+ Y +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 261 GSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLL 320
++ A ++F+ + E+D VT+ ++I GY +G ++ LF M+ G +P+ T +L
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 321 SACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTV 380
A L+ G+ LHA ++ + V ++D Y+K + V + +F + V
Sbjct: 258 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 317
Query: 381 PWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYL 440
+N +++ ++ FR+M + + ++L A L+ LQ +HC
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 441 IRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGY---GMHGH 497
+ S++ V L+D+Y+KC E A IF +P + V W+ +I+GY G+HG
Sbjct: 378 LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP--QRTTVSWTALISGYVQKGLHGA 435
Query: 498 GETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYT 557
G + LF +M S ++ ++ TF + L A + L G L F++ + +
Sbjct: 436 G---LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRS-GNLENVFSGS 491
Query: 558 CIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVE--LGEVAAKWLFELE 615
+VD+ + G + +A + MP + W AL+ A +G+ E +G A L+
Sbjct: 492 GLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQ 550
Query: 616 PEN 618
P++
Sbjct: 551 PDS 553
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 159/306 (51%), Gaps = 9/306 (2%)
Query: 33 KQLHAFIITSGPLFTHLRS------SLVRAYGHVSNVRILFDEMSERSSFLYNTVMKMYA 86
+QLHA +T+G F+ S + V R+LFDEM E YN V+ Y+
Sbjct: 270 QQLHALSVTTG--FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 87 QNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDT 146
Q SL F M +G ++ N+ + ++ +L+ ++G LH + L+ D
Sbjct: 328 QADQYEASLHFFREMQCMG-FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL 386
Query: 147 FVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKS 206
VGN L+ MY + A +F ++ + + VSW LISGY + L +F M S
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS 446
Query: 207 GVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEA 266
+ D ++ +VL A + +G+ +H + +N+ + + LVDMY KCGS+ +A
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 506
Query: 267 RLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSL 326
VF+ M +R+ V+W ++I+ +A NGD A+G F M G++P+S++I +L+ACS
Sbjct: 507 VQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHC 566
Query: 327 YYLKRG 332
++++G
Sbjct: 567 GFVEQG 572
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 161/363 (44%), Gaps = 16/363 (4%)
Query: 245 KNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLM 304
KN + N ++ +VK G V+ AR +FD M +R VVTWT ++ YA N A LF+ M
Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Query: 305 --QFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECE--VIVETALIDMYAK 360
P+ +T +LL C+ +HA+ +K + + V L+ Y +
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCE 196
Query: 361 CNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSL 420
+ L+ +F +K +V +N ++ G +GL +++ LF +M +P+D T + +
Sbjct: 197 VRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGV 256
Query: 421 LPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDK 480
L A L D +H + GF V ++D YSK + +F E+P +
Sbjct: 257 LKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP--EL 314
Query: 481 DIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLF 540
D V ++V+I+ Y E ++ F+EM G F + L ++ L G L
Sbjct: 315 DFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLH 374
Query: 541 NFMLENHQTCSRADHY----TCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACV 596
L + AD +VD+ + +EA + +++P + T W AL+ V
Sbjct: 375 CQAL-----LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT-VSWTALISGYV 428
Query: 597 IHG 599
G
Sbjct: 429 QKG 431
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 116/305 (38%), Gaps = 56/305 (18%)
Query: 33 KQLHAFIITSGPLFTHLR-SSLVRAY---GHVSNVRILFDEMSERSSFLYNTVMKMYAQN 88
KQLHAFII SG L S LV Y G + + +F+EM +R++ +N ++ +A N
Sbjct: 472 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADN 531
Query: 89 GASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIA-LHGRVLITGFDMDTF 147
G ++ F M+ G PD+ + V+ AC+ + + G I G
Sbjct: 532 GDGEAAIGAFAKMIESG-LQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKK 590
Query: 148 VGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSG 207
C++ + G A K+ D M
Sbjct: 591 HYACMLDLLGRNGRFAEAEKLMDEM----------------------------------P 616
Query: 208 VEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEAR 267
EPD SVL AC K + E + ++ AA+ ++ ++Y G + R
Sbjct: 617 FEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVR 676
Query: 268 LVFDRMSERDV-----VTWTSMINGYAL---------NGD--VRNALGLFQLMQFEGVRP 311
V M ER + +W + + + NGD VR L ++ EG +P
Sbjct: 677 DVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKP 736
Query: 312 NSLTI 316
++ ++
Sbjct: 737 DTSSV 741
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 35/153 (22%)
Query: 408 EVVEPNDATLNSL-LPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLE 466
EV ATL L P+ A D ++ + +I+ GF + S +++ + G +
Sbjct: 9 EVRSRTLATLRQLRQPSPATFLDTRR---VDARIIKTGFDTDTCRSNFIVEDLLRRGQVS 65
Query: 467 SAHKIFSEIPIK-----------------------------DKDIVVWSVIIAGYGMHGH 497
+A K++ E+P K D+ +V W++++ Y + H
Sbjct: 66 AARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSH 125
Query: 498 GETAVSLFKEMVQSG--VQPNEVTFTSALHACS 528
+ A LF++M +S P+ VTFT+ L C+
Sbjct: 126 FDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCN 158
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 360 bits (923), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 207/619 (33%), Positives = 330/619 (53%), Gaps = 13/619 (2%)
Query: 52 SLVRAYGHVSNV---RILFDEMSER--SSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGE 106
+L R Y + V R +FDE+ + ++ +++ YA N + +L ++ ML G
Sbjct: 40 NLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSG- 98
Query: 107 YNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAAR 166
P YTYP V+KAC L G +H V + F D +V L+ Y GE++ A
Sbjct: 99 VRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAI 158
Query: 167 KVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVF-DWMLKSGVEPDCASVVSVLPACGYL 225
KVFD M + +V+WN +ISG+ + + + +F D G+ P+ +++V + PA G
Sbjct: 159 KVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRA 218
Query: 226 KEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMI 285
+ G+ +H ++ ++D+Y K + AR VFD +++ VTW++MI
Sbjct: 219 GALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMI 278
Query: 286 NGYALNGDVRNALGLF-QLMQFEGVR-PNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQN 343
GY N ++ A +F Q++ + V + IG +L C+ L GR +H + +K
Sbjct: 279 GGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAG 338
Query: 344 LECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFR 403
++ V+ +I YAK + +F+ F+ K + +N+++ GCV N ++ LF
Sbjct: 339 FILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFH 398
Query: 404 QMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCG 463
+M + P+ TL +L A + LA L + H Y + +G+ + L+D+Y+KCG
Sbjct: 399 EMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCG 458
Query: 464 SLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSA 523
L+ A ++F + +DIV W+ ++ G+G+HG G+ A+SLF M ++GV P+EVT +
Sbjct: 459 KLDVAKRVFD--TMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAI 516
Query: 524 LHACSHGGLLDEGLDLFNFMLE-NHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLK 582
L ACSH GL+DEG LFN M + R DHY C+ DLL RAG LDEAYD + MP +
Sbjct: 517 LSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFE 576
Query: 583 PTHAVWGALLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVR 642
P V G LL AC + N ELG +K + L E + VLLS YSA RW+DA +R
Sbjct: 577 PDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWEDAARIR 635
Query: 643 DVMDEKGLRKAPAHSLIEV 661
+ ++GL K P +S ++V
Sbjct: 636 MIQKKRGLLKTPGYSWVDV 654
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 241/520 (46%), Gaps = 22/520 (4%)
Query: 4 PSHHTLPKTTHLVIKLVQQYAATKSIAGTKQLHAFIITSG-PLFTHLRSSLVRAYGHVSN 62
P+ +T P V+K A ++I K +H+ + S ++ ++LV Y
Sbjct: 101 PTKYTYP----FVLKAC---AGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGE 153
Query: 63 VRI---LFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIK 119
+ + +FDEM +R +N ++ ++ + D + +FL M R+ +P+ T +
Sbjct: 154 LEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFP 213
Query: 120 ACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVS 179
A + G A+HG GF D V ++ +Y + AR+VFD ++ + V+
Sbjct: 214 ALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVT 273
Query: 180 WNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSV-----LPACGYLKEIEMGRMI 234
W+ +I GY +N KEA VF ML V + A V V L C ++ GR +
Sbjct: 274 WSAMIGGYVENEMIKEAGEVFFQML---VNDNVAMVTPVAIGLILMGCARFGDLSGGRCV 330
Query: 235 HELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDV 294
H ++ N ++ Y K GS+ +A F + +DV+++ S+I G +N
Sbjct: 331 HCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRP 390
Query: 295 RNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETAL 354
+ LF M+ G+RP+ T+ +L+ACS L L G S H + + + AL
Sbjct: 391 EESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNAL 450
Query: 355 IDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPND 414
+DMY KC + ++ +VF K+ V WN +L G +GL ++A+ LF M V P++
Sbjct: 451 MDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDE 510
Query: 415 ATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVS--TGLIDIYSKCGSLESAHKIF 472
TL ++L A + + + + + R F + + + D+ ++ G L+ A+
Sbjct: 511 VTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFV 570
Query: 473 SEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSG 512
+++P + DI V +++ + + E + K+M G
Sbjct: 571 NKMPF-EPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLG 609
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 11/168 (6%)
Query: 436 IHCYLIRYGF-LSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGM 494
IH +L++ LS V L +Y+ C +E A +F EIP + + W ++I Y
Sbjct: 21 IHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYAS 80
Query: 495 HGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSR-- 552
+ E A+ L+ +M+ SGV+P + T+ L AC+ +D+G ++ +H CS
Sbjct: 81 NDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK-----LIHSHVNCSDFA 135
Query: 553 ADHYTC--IVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIH 598
D Y C +VD + G L+ A + MP K W A++ +H
Sbjct: 136 TDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWNAMISGFSLH 182
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 359 bits (922), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/600 (33%), Positives = 320/600 (53%), Gaps = 72/600 (12%)
Query: 134 HGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYA 193
H R+L +G D ++ LIA Y N+ A V ++ + ++ S+++LI K
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 194 KEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNAL 253
+++ VF M G+ PD + ++ C L ++G+ IH + L + ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 254 VDMYVKCGSVNEARLVFDRMSERDVVT--------------------------------- 280
MY++CG + +AR VFDRMS++DVVT
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 281 --WTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAW 338
W +++G+ +G + A+ +FQ + G P+ +T+ S+L + L GR +H +
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 339 TIKQNLECEVIVETALIDMYAK---------------------CN----------LVKLS 367
IKQ L + V +A+IDMY K CN LV +
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 368 FQVFA----RTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPA 423
++F +T + V W +I+AGC NG +A+ELFR+M V V+PN T+ S+LPA
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Query: 424 YAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIV 483
+A L + H + +R L V V + LID+Y+KCG + + +F+ +P K+ +V
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN--LV 455
Query: 484 VWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFM 543
W+ ++ G+ MHG + +S+F+ ++++ ++P+ ++FTS L AC GL DEG F M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 544 LENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVEL 603
E + R +HY+C+V+LLGRAG+L EAYDLI+ MP +P VWGALL +C + NV+L
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 604 GEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVRN 663
E+AA+ LF LEPENPG YVLLS +Y+A W + +++R+ M+ GL+K P S I+V+N
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 150/533 (28%), Positives = 254/533 (47%), Gaps = 77/533 (14%)
Query: 32 TKQLHAFIITSGPLFT-HLRSSLVRAYGH---VSNVRILFDEMSERSSFLYNTVMKMYAQ 87
T Q HA I+ SG ++ + L+ +Y + ++ ++ + + + + +++++ +
Sbjct: 34 TTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 88 NGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTF 147
S+ +F M G PD++ P + K C +L+ K+G +H ++G DMD F
Sbjct: 94 AKLFTQSIGVFSRMFSHGLI-PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 148 VGNCLIAMYMNFGEVKAARKVFDAM----------------------------------- 172
V + MYM G + ARKVFD M
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 173 WEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGR 232
E ++VSWN ++SG+ ++ Y KEA+V+F + G PD +V SVLP+ G + + MGR
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 233 MIHELVAGGRLGKNIAAWNALVDMYVKCGS------------------------------ 262
+IH V L K+ +A++DMY K G
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 263 -VNEARLVFDRMSER----DVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIG 317
V++A +F+ E+ +VV+WTS+I G A NG AL LF+ MQ GV+PN +TI
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 318 SLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKK 377
S+L AC ++ L GRS H + ++ +L V V +ALIDMYAKC + LS VF K
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 378 KTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIH 437
V WN+++ G +G A++ + +F ++ ++P+ + SLL A + +
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 438 CYLI-RYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVII 489
+ YG +E + ++++ + G L+ A+ + E+P + D VW ++
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPF-EPDSCVWGALL 564
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 135/269 (50%), Gaps = 11/269 (4%)
Query: 66 LFDEMS-ERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDL 124
LF E + E + + +++ AQNG ++L++F M ++ P++ T P ++ AC ++
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKPNHVTIPSMLPACGNI 401
Query: 125 AWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLI 184
A G + HG + + VG+ LI MY G + ++ VF+ M ++V WN+L+
Sbjct: 402 AALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLM 461
Query: 185 SGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMG----RMIHELVAG 240
+G+ + AKE + +F+ ++++ ++PD S S+L ACG + + G +M+ E
Sbjct: 462 NGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYG- 520
Query: 241 GRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMS-ERDVVTWTSMINGYALNGDVRNA-L 298
+ + ++ +V++ + G + EA + M E D W +++N L +V A +
Sbjct: 521 --IKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEI 578
Query: 299 GLFQLMQFEGVRPNSLTIGSLLSACSSLY 327
+L E P + + S + A ++
Sbjct: 579 AAEKLFHLEPENPGTYVLLSNIYAAKGMW 607
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 359 bits (922), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 212/615 (34%), Positives = 329/615 (53%), Gaps = 6/615 (0%)
Query: 57 YGHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPI 116
+G + +LFDEM +R S +NT++ Y G D+ +F M R G + D Y++
Sbjct: 48 FGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGS-DVDGYSFSR 106
Query: 117 VIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHS 176
++K + LG +HG V+ G++ + +VG+ L+ MY V+ A + F + E +
Sbjct: 107 LLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPN 166
Query: 177 VVSWNTLISGYFKNAYAKEALVVFDWM-LKSGVEPDCASVVSVLPACGYLKEIEMGRMIH 235
VSWN LI+G+ + K A + M +K+ V D + +L + + +H
Sbjct: 167 SVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVH 226
Query: 236 ELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMS-ERDVVTWTSMINGYALNGDV 294
V L I NA++ Y CGSV++A+ VFD + +D+++W SMI G++ +
Sbjct: 227 AKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELK 286
Query: 295 RNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETAL 354
+A LF MQ V + T LLSACS + G+SLH IK+ LE AL
Sbjct: 287 ESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNAL 346
Query: 355 IDMYAK--CNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEP 412
I MY + ++ + +F K + WN+I+ G GL+ AV+ F + ++
Sbjct: 347 ISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKV 406
Query: 413 NDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIF 472
+D ++LL + + LA LQ IH + GF+S V + LI +YSKCG +ESA K F
Sbjct: 407 DDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCF 466
Query: 473 SEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGL 532
+I K V W+ +I GY HG G+ ++ LF +M V+ + VTFT+ L ACSH GL
Sbjct: 467 QQISSK-HSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGL 525
Query: 533 LDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALL 592
+ EGL+L N M ++ R +HY VDLLGRAG +++A +LI +MPL P V L
Sbjct: 526 IQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFL 585
Query: 593 GACVIHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRK 652
G C G +E+ A L E+EPE+ YV LS +YS +++W++ +V+ +M E+G++K
Sbjct: 586 GVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKK 645
Query: 653 APAHSLIEVRNILTA 667
P S IE+RN + A
Sbjct: 646 VPGWSWIEIRNQVKA 660
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 235/497 (47%), Gaps = 11/497 (2%)
Query: 126 WRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLIS 185
++KL + H + G D +V N ++ Y+ FG + A +FD M + VSWNT+IS
Sbjct: 16 FQKLSLT-HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMIS 74
Query: 186 GYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGK 245
GY ++A +F M +SG + D S +L +K ++G +H LV G
Sbjct: 75 GYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC 134
Query: 246 NIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQ 305
N+ ++LVDMY KC V +A F +SE + V+W ++I G+ D++ A L LM+
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 306 FE-GVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLV 364
+ V ++ T LL+ + + +HA +K L+ E+ + A+I YA C V
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSV 254
Query: 365 KLSFQVF-ARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPA 423
+ +VF K + WN+++AG + L A ELF QM VE + T LL A
Sbjct: 255 SDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSA 314
Query: 424 YAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSK--CGSLESAHKIFSEIPIKDKD 481
+ ++H +I+ G V + LI +Y + G++E A +F +K KD
Sbjct: 315 CSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFE--SLKSKD 372
Query: 482 IVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFN 541
++ W+ II G+ G E AV F + S ++ ++ F++ L +CS L G +
Sbjct: 373 LISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHA 432
Query: 542 FMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNV 601
++ + + IV + + G ++ A + + K + W A++ HG
Sbjct: 433 LATKSGFVSNEFVISSLIV-MYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG-- 489
Query: 602 ELGEVAAKWLFELEPEN 618
LG+V+ ++ +N
Sbjct: 490 -LGQVSLDLFSQMCNQN 505
>sp|Q1PFA6|PP144_ARATH Pentatricopeptide repeat-containing protein At2g02750
OS=Arabidopsis thaliana GN=PCMP-E22 PE=2 SV=2
Length = 613
Score = 357 bits (916), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 206/589 (34%), Positives = 317/589 (53%), Gaps = 41/589 (6%)
Query: 107 YNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAAR 166
++P+ +T+P ++K+C L G LH +V+ TGF +D F L++MYM +V A
Sbjct: 27 HSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDAL 86
Query: 167 KVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLK 226
KV D M E + S N +SG +N + ++A +F SG + +V SVL CG
Sbjct: 87 KVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG--- 143
Query: 227 EIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMIN 286
+IE G +H L + +LV MY +CG A +F+++ + VVT+ + I+
Sbjct: 144 DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFIS 203
Query: 287 GYALNGDVRNALGLFQLM-QFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLE 345
G NG + +F LM +F PN +T + ++AC+SL L+ GR LH +K+ +
Sbjct: 204 GLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQ 263
Query: 346 CEVIVETALIDMYAKCNLVKLSFQVFARTSKKKT-VPWNAILAGCVHNGLARKAVELFRQ 404
E +V TALIDMY+KC K ++ VF + + WN++++G + NG AVELF +
Sbjct: 264 FETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEK 323
Query: 405 MLVEVVEPNDATLNSLLPAYAILAD----------------------------------- 429
+ E ++P+ AT NSL+ ++ L
Sbjct: 324 LDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWT 383
Query: 430 LQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVII 489
L+ IH ++I+ + V T LID+Y KCG A +IF K KD V W+V+I
Sbjct: 384 LKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMI 443
Query: 490 AGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQT 549
+GYG HG E+A+ +F+ + + V+P+ TFT+ L ACSH G +++G +F M E +
Sbjct: 444 SGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGY 503
Query: 550 CSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAK 609
+H C++DLLGR+GRL EA ++I M + +LLG+C H + LGE AA
Sbjct: 504 KPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAM 562
Query: 610 WLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSL 658
L ELEPENP +V+LS +Y+A+ RW+D E++R V+D+K L K P SL
Sbjct: 563 KLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 148/520 (28%), Positives = 248/520 (47%), Gaps = 59/520 (11%)
Query: 2 NGPSHHTLPKTTHLVIKLVQQYAATKSIAGTKQLHAFIITSG---PLFTHLRSSLVRAY- 57
+ P+ T P L++ A + + LHA ++ +G +FT ++LV Y
Sbjct: 27 HSPNKFTFPP-------LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTA--TALVSMYM 77
Query: 58 --GHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYP 115
V++ + DEM ER N + +NG D+ +MF G R+ ++ T
Sbjct: 78 KVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMF-GDARVSGSGMNSVTVA 136
Query: 116 IVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEH 175
V+ C D+ + G+ LH + +GF+M+ +VG L++MY GE A ++F+ +
Sbjct: 137 SVLGGCGDI---EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHK 193
Query: 176 SVVSWNTLISGYFKNAYAKEALVVFDWMLK-SGVEPDCASVVSVLPACGYLKEIEMGRMI 234
SVV++N ISG +N VF+ M K S EP+ + V+ + AC L ++ GR +
Sbjct: 194 SVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQL 253
Query: 235 HELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSE-RDVVTWTSMINGYALNGD 293
H LV AL+DMY KC A +VF + + R++++W S+I+G +NG
Sbjct: 254 HGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQ 313
Query: 294 VRNALGLFQLMQFEGVRPNSLT-----------------------------------IGS 318
A+ LF+ + EG++P+S T + S
Sbjct: 314 HETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTS 373
Query: 319 LLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKK 378
LLSACS ++ LK G+ +H IK E ++ V T+LIDMY KC L + ++F R K
Sbjct: 374 LLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKP 433
Query: 379 TVP--WNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNI 436
P WN +++G +G A+E+F + E VEP+ AT ++L A + ++++ I
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQI 493
Query: 437 HCYLI-RYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEI 475
+ YG+ E +ID+ + G L A ++ ++
Sbjct: 494 FRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 357 bits (916), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/534 (36%), Positives = 293/534 (54%), Gaps = 35/534 (6%)
Query: 132 ALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNA 191
+H R+++ ++ +G L+ Y + +V +ARKVFD + E +V+ N +I Y N
Sbjct: 60 TVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNG 119
Query: 192 YAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWN 251
+ E + VF M V PD + VL AC I +GR IH L + N
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179
Query: 252 ALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRP 311
LV MY KCG ++EARLV D MS RDVV+W S++ GYA N +AL + + M+ +
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISH 239
Query: 312 NSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVF 371
++ T+ SLL A S+ T +N+ MY K +F
Sbjct: 240 DAGTMASLLPAVSN-------------TTTENV------------MYVK--------DMF 266
Query: 372 ARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQ 431
+ KK V WN ++ + N + +AVEL+ +M + EP+ ++ S+LPA + L
Sbjct: 267 FKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALS 326
Query: 432 QAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAG 491
IH Y+ R + + + LID+Y+KCG LE A +F + K +D+V W+ +I+
Sbjct: 327 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM--KSRDVVSWTAMISA 384
Query: 492 YGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCS 551
YG G G AV+LF ++ SG+ P+ + F + L ACSH GLL+EG F M ++++
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444
Query: 552 RADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWL 611
R +H C+VDLLGRAG++ EAY I+ M ++P VWGALLGAC +H + ++G +AA L
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL 504
Query: 612 FELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVRNIL 665
F+L PE G YVLLS +Y+ RW++ N+R++M KGL+K P S +EV I+
Sbjct: 505 FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRII 558
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 232/492 (47%), Gaps = 47/492 (9%)
Query: 11 KTTHLVIKLVQQYAATKSIAGTKQLHAFIITSG-PLFTHLRSSLVRAYGHVSNV---RIL 66
+T L+ +++ Y +++ + +H+ II + L L+RAY + +V R +
Sbjct: 40 ETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKV 96
Query: 67 FDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAW 126
FDE+ ER+ + N +++ Y NG + +K+F G + PD+YT+P V+KAC+
Sbjct: 97 FDEIPERNVIIINVMIRSYVNNGFYGEGVKVF-GTMCGCNVRPDHYTFPCVLKACSCSGT 155
Query: 127 RKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISG 186
+G +HG G FVGN L++MY G + AR V D M VVSWN+L+ G
Sbjct: 156 IVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVG 215
Query: 187 YFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKN 246
Y +N +AL V M + D ++ S+LPA N
Sbjct: 216 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS----------------------N 253
Query: 247 IAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQF 306
N MYVK +F +M ++ +V+W MI Y N A+ L+ M+
Sbjct: 254 TTTENV---MYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEA 302
Query: 307 EGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKL 366
+G P++++I S+L AC L G+ +H + ++ L +++E ALIDMYAKC ++
Sbjct: 303 DGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEK 362
Query: 367 SFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAI 426
+ VF + V W A+++ +G AV LF ++ + P+ + L A +
Sbjct: 363 ARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSH 422
Query: 427 LADLQQAMNIHCYLI---RYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIV 483
L++ + C+ + Y +E ++D+ + G ++ A++ ++ ++ +
Sbjct: 423 AGLLEEGRS--CFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNE-R 479
Query: 484 VWSVIIAGYGMH 495
VW ++ +H
Sbjct: 480 VWGALLGACRVH 491
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 200/585 (34%), Positives = 328/585 (56%), Gaps = 43/585 (7%)
Query: 117 VIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHS 176
+IK T + + LH + + T + + +I++Y N + A +F +
Sbjct: 11 LIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPP 69
Query: 177 VVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHE 236
V++W ++I + + +AL F M SG PD SVL +C + ++ G +H
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 237 LVAGGRLGKNIAAW--NALVDMYVKC---GS----------------------------- 262
+ RLG + + NAL++MY K GS
Sbjct: 130 FIV--RLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCI 187
Query: 263 ----VNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGS 318
++ R VF+ M +DVV++ ++I GYA +G +AL + + M ++P+S T+ S
Sbjct: 188 MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSS 247
Query: 319 LLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKK 378
+L S + +G+ +H + I++ ++ +V + ++L+DMYAK ++ S +VF+R +
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307
Query: 379 TVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHC 438
+ WN+++AG V NG +A+ LFRQM+ V+P +S++PA A LA L +H
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367
Query: 439 YLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHG 498
Y++R GF S + +++ L+D+YSKCG++++A KIF + + D+ V W+ II G+ +HGHG
Sbjct: 368 YVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE--VSWTAIIMGHALHGHG 425
Query: 499 ETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTC 558
AVSLF+EM + GV+PN+V F + L ACSH GL+DE FN M + + +HY
Sbjct: 426 HEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA 485
Query: 559 IVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFELEPEN 618
+ DLLGRAG+L+EAY+ I M ++PT +VW LL +C +H N+EL E A+ +F ++ EN
Sbjct: 486 VADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN 545
Query: 619 PGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVRN 663
G YVL+ +Y++ RWK+ +R M +KGLRK PA S IE++N
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKN 590
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 256/535 (47%), Gaps = 46/535 (8%)
Query: 9 LPKTTHLVIKLVQQYAATKSIAGTKQLHAFIITSGPLFTHLRSSLVRA----YGHVSNVR 64
+ + L+ L++ KS + KQLHA I + L +H +S+V + +
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSL-SHTSASIVISIYTNLKLLHEAL 59
Query: 65 ILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDL 124
+LF + + +V++ + +L F+ M G PD+ +P V+K+CT +
Sbjct: 60 LLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC-PDHNVFPSVLKSCTMM 118
Query: 125 AWRKLGIALHGRVLITGFDMDTFVGNCLIAMY---------------------------- 156
+ G ++HG ++ G D D + GN L+ MY
Sbjct: 119 MDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGD 178
Query: 157 ---------MNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSG 207
M FG + + R+VF+ M VVS+NT+I+GY ++ ++AL + M +
Sbjct: 179 EDVKAETCIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 237
Query: 208 VEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEAR 267
++PD ++ SVLP ++ G+ IH V + ++ ++LVDMY K + ++
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297
Query: 268 LVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLY 327
VF R+ RD ++W S++ GY NG AL LF+ M V+P ++ S++ AC+ L
Sbjct: 298 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357
Query: 328 YLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILA 387
L G+ LH + ++ + + +AL+DMY+KC +K + ++F R + V W AI+
Sbjct: 358 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 417
Query: 388 GCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIR-YGFL 446
G +G +AV LF +M + V+PN ++L A + + + +A + + YG
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 477
Query: 447 SVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETA 501
+E + D+ + G LE A+ S++ ++ VWS +++ +H + E A
Sbjct: 478 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTG-SVWSTLLSSCSVHKNLELA 531
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 191/346 (55%), Gaps = 6/346 (1%)
Query: 60 VSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIK 119
+ +VR +F+ M + YNT++ YAQ+G D+L+M M + PD++T V+
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM-GTTDLKPDSFTLSSVLP 250
Query: 120 ACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVS 179
++ G +HG V+ G D D ++G+ L+ MY ++ + +VF ++ +S
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 180 WNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVA 239
WN+L++GY +N EAL +F M+ + V+P + SV+PAC +L + +G+ +H V
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 240 GGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALG 299
G G NI +ALVDMY KCG++ AR +FDRM+ D V+WT++I G+AL+G A+
Sbjct: 371 RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVS 430
Query: 300 LFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRS-LHAWTIKQNLECEVIVETALIDMY 358
LF+ M+ +GV+PN + ++L+ACS + + ++ T L E+ A+ D+
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 490
Query: 359 AKCNLVKLSFQVFARTSKKKTVP-WNAILAGC-VHNG--LARKAVE 400
+ ++ ++ ++ + T W+ +L+ C VH LA K E
Sbjct: 491 GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAE 536
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 355 bits (912), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 216/639 (33%), Positives = 345/639 (53%), Gaps = 17/639 (2%)
Query: 33 KQLHAFIITSGPLF-THLRSSLVRAYGHVSNV---RILFDEMSERSSFLYNTVMKMYAQN 88
+QLH I G L + +SLV Y SN R +FDEM ER+ + T++ YA+N
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 89 GASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFV 148
+ + L +F+ M G P+++T+ + + G+ +H V+ G D V
Sbjct: 173 SMNDEVLTLFMRMQNEGT-QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 149 GNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGV 208
N LI +Y+ G V+ AR +FD SVV+WN++ISGY N EAL +F M + V
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 209 EPDCASVVSVLPACGYLKEIEMGRMIHELVA--GGRLGKNIAAWNALVDMYVKCGSVNEA 266
+S SV+ C LKE+ +H V G +NI AL+ Y KC ++ +A
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT--ALMVAYSKCTAMLDA 349
Query: 267 RLVFDRMS-ERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSS 325
+F + +VV+WT+MI+G+ N A+ LF M+ +GVRPN T +L+A
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV 409
Query: 326 LYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAI 385
+ +HA +K N E V TAL+D Y K V+ + +VF+ K V W+A+
Sbjct: 410 I----SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 386 LAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAIL-ADLQQAMNIHCYLIRYG 444
LAG G A+++F ++ ++PN+ T +S+L A A + Q H + I+
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 525
Query: 445 FLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSL 504
S + VS+ L+ +Y+K G++ESA ++F ++KD+V W+ +I+GY HG A+ +
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQ--REKDLVSWNSMISGYAQHGQAMKALDV 583
Query: 505 FKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLG 564
FKEM + V+ + VTF AC+H GL++EG F+ M+ + + +H +C+VDL
Sbjct: 584 FKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 643
Query: 565 RAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFELEPENPGNYVL 624
RAG+L++A +I MP +W +L AC +H ELG +AA+ + ++PE+ YVL
Sbjct: 644 RAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVL 703
Query: 625 LSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVRN 663
LS +Y+ W++ VR +M+E+ ++K P +S IEV+N
Sbjct: 704 LSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKN 742
Score = 278 bits (712), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 175/558 (31%), Positives = 287/558 (51%), Gaps = 30/558 (5%)
Query: 57 YGHVSNVRI-----LFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDN 111
+G VS+ R+ LFD+ R Y +++ ++++G + ++ ++FL + RLG D
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLG-MEMDC 93
Query: 112 YTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDA 171
+ V+K L G LH + + GF D VG L+ YM K RKVFD
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 172 MWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMG 231
M E +VV+W TLISGY +N+ E L +F M G +P+ + + L G L E +G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAAL---GVLAEEGVG 210
Query: 232 R---MIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGY 288
+H +V L K I N+L+++Y+KCG+V +AR++FD+ + VVTW SMI+GY
Sbjct: 211 GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY 270
Query: 289 ALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEV 348
A NG ALG+F M+ VR + + S++ C++L L+ LH +K +
Sbjct: 271 AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ 330
Query: 349 IVETALIDMYAKCNLVKLSFQVFARTS-KKKTVPWNAILAGCVHNGLARKAVELFRQMLV 407
+ TAL+ Y+KC + + ++F V W A+++G + N +AV+LF +M
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR 390
Query: 408 EVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLES 467
+ V PN+ T + +L A +++ + +H +++ + V T L+D Y K G +E
Sbjct: 391 KGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEE 446
Query: 468 AHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHAC 527
A K+FS I DKDIV WS ++AGY G E A+ +F E+ + G++PNE TF+S L+ C
Sbjct: 447 AAKVFS--GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 528 -SHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLL----GRAGRLDEAYDLIRTMPLK 582
+ + +G F ++ SR D C+ L + G ++ A ++ + K
Sbjct: 505 AATNASMGQGKQFHGFAIK-----SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK 559
Query: 583 PTHAVWGALLGACVIHGN 600
W +++ HG
Sbjct: 560 DL-VSWNSMISGYAQHGQ 576
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/450 (30%), Positives = 230/450 (51%), Gaps = 14/450 (3%)
Query: 159 FGEVKAAR-----KVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCA 213
FG V ++R +FD S+ +L+ G+ ++ +EA +F + + G+E DC+
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS 94
Query: 214 SVVSVLPACGYLKEIEMGRMIH-ELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDR 272
SVL L + GR +H + + G L +++ +LVD Y+K + + R VFD
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFL-DDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 273 MSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRG 332
M ER+VVTWT++I+GYA N L LF MQ EG +PNS T + L + RG
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 333 RSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHN 392
+H +K L+ + V +LI++Y KC V+ + +F +T K V WN++++G N
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 393 GLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVS 452
GL +A+ +F M + V ++++ S++ A L +L+ +HC +++YGFL +
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 453 TGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSG 512
T L+ YSKC ++ A ++F EI ++V W+ +I+G+ + E AV LF EM + G
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVG-NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 513 VQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEA 572
V+PNE T++ L A + + E T T ++D + G+++EA
Sbjct: 393 VRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVG-----TALLDAYVKLGKVEEA 447
Query: 573 YDLIRTMPLKPTHAVWGALLGACVIHGNVE 602
+ + K A W A+L G E
Sbjct: 448 AKVFSGIDDKDIVA-WSAMLAGYAQTGETE 476
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 217/437 (49%), Gaps = 31/437 (7%)
Query: 16 VIKLVQQYAATKSIAGTKQLHAFIITSGPLF-THLRSSLVRAYGHVS---NVRILFDEMS 71
VIKL A K + T+QLH ++ G LF ++R++L+ AY + + LF E+
Sbjct: 301 VIKLC---ANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIG 357
Query: 72 ERSSFLYNTVM-KMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLG 130
+ + T M + QN +++ +F M R G P+ +TY +++ A ++ +
Sbjct: 358 CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG-VRPNEFTYSVILTALPVISPSE-- 414
Query: 131 IALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKN 190
+H +V+ T ++ + VG L+ Y+ G+V+ A KVF + + +V+W+ +++GY +
Sbjct: 415 --VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 191 AYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLK-EIEMGRMIHELVAGGRLGKNIAA 249
+ A+ +F + K G++P+ + S+L C + G+ H RL ++
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 250 WNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGV 309
+AL+ MY K G++ A VF R E+D+V+W SMI+GYA +G AL +F+ M+ V
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Query: 310 RPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIV----ETALIDMYAKCNLVK 365
+ + +T + +AC+ ++ G ++ +C++ + ++D+Y++ ++
Sbjct: 593 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR---DCKIAPTKEHNSCMVDLYSRAGQLE 649
Query: 366 LSFQVFAR-TSKKKTVPWNAILAGC-VHNGLARKAVELFRQMLVEVV--EPNDATLNSLL 421
+ +V + + W ILA C VH K EL R +++ +P D+ LL
Sbjct: 650 KAMKVIENMPNPAGSTIWRTILAACRVH-----KKTELGRLAAEKIIAMKPEDSAAYVLL 704
Query: 422 P-AYAILADLQQAMNIH 437
YA D Q+ +
Sbjct: 705 SNMYAESGDWQERAKVR 721
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 355 bits (910), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 207/638 (32%), Positives = 348/638 (54%), Gaps = 10/638 (1%)
Query: 33 KQLHAFII-TSGPLFTHLRSSLVRAY---GHVSNVRILFDEMSERSSF-LYNTVMKMYAQ 87
KQ+H F++ S + L+++L+ Y G + +F E+ ++S+ L+N ++ +
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 88 NGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTF 147
+G SL +++ + + + ++ + AC+ G +H V+ G D +
Sbjct: 250 SGICESSLDLYM-LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPY 308
Query: 148 VGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSG 207
V L++MY G V A VF + + + WN +++ Y +N Y AL +F +M +
Sbjct: 309 VCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKS 368
Query: 208 VEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEAR 267
V PD ++ +V+ C L G+ +H + + +AL+ +Y KCG +A
Sbjct: 369 VLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAY 428
Query: 268 LVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFE--GVRPNSLTIGSLLSACSS 325
LVF M E+D+V W S+I+G NG + AL +F M+ + ++P+S + S+ +AC+
Sbjct: 429 LVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAG 488
Query: 326 LYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAI 385
L L+ G +H IK L V V ++LID+Y+KC L +++ +VF S + V WN++
Sbjct: 489 LEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSM 548
Query: 386 LAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGF 445
++ N L +++LF ML + + P+ ++ S+L A + A L + ++H Y +R G
Sbjct: 549 ISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGI 608
Query: 446 LSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLF 505
S + LID+Y KCG + A IF ++ + K ++ W+++I GYG HG TA+SLF
Sbjct: 609 PSDTHLKNALIDMYVKCGFSKYAENIFKKM--QHKSLITWNLMIYGYGSHGDCITALSLF 666
Query: 506 KEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGR 565
EM ++G P++VTF S + AC+H G ++EG ++F FM +++ +HY +VDLLGR
Sbjct: 667 DEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGR 726
Query: 566 AGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFELEPENPGNYVLL 625
AG L+EAY I+ MP++ ++W LL A H NVELG ++A+ L +EPE YV L
Sbjct: 727 AGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQL 786
Query: 626 SKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVRN 663
LY +A + +M EKGL K P S IEV +
Sbjct: 787 INLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSD 824
Score = 202 bits (514), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 146/510 (28%), Positives = 247/510 (48%), Gaps = 33/510 (6%)
Query: 112 YTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDA 171
+T+P ++KAC+ L G +HG V++ G+ D F+ L+ MY+ G + A +VFD
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 172 MWEHS--------VVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCAS---VVSVLP 220
W S V WN++I GYFK KE + F ML GV PD S VVSV+
Sbjct: 121 -WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMC 179
Query: 221 ACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCG-SVNEARLVFDRMSERDVV 279
G + E G+ IH + L + AL+DMY K G S++ R+ + + +VV
Sbjct: 180 KEGNFRR-EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV 238
Query: 280 TWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWT 339
W MI G+ +G ++L L+ L + V+ S + L ACS GR +H
Sbjct: 239 LWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDV 298
Query: 340 IKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAV 399
+K L + V T+L+ MY+KC +V + VF+ K+ WNA++A N A+
Sbjct: 299 VKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSAL 358
Query: 400 ELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIY 459
+LF M + V P+ TL++++ ++L ++H L + S + + L+ +Y
Sbjct: 359 DLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLY 418
Query: 460 SKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMV--QSGVQPNE 517
SKCG A+ +F +++KD+V W +I+G +G + A+ +F +M ++P+
Sbjct: 419 SKCGCDPDAYLVFKS--MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDS 476
Query: 518 VTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHY------TCIVDLLGRAGRLDE 571
TS +AC+ GL+ F L+ H + + + ++DL + G +
Sbjct: 477 DIMTSVTNACA-------GLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEM 529
Query: 572 AYDLIRTMPLKPTHAVWGALLGACVIHGNV 601
A + +M + A W +++ +C N+
Sbjct: 530 ALKVFTSMSTENMVA-WNSMI-SCYSRNNL 557
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 354 bits (908), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 208/608 (34%), Positives = 324/608 (53%), Gaps = 11/608 (1%)
Query: 64 RILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTD 123
R LFD M ER+ +N+++ Y Q G ++++FL R D +TY + C +
Sbjct: 102 RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEA-REANLKLDKFTYAGALGFCGE 160
Query: 124 LAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTL 183
LG LHG V++ G F+ N LI MY G++ A +FD E VSWN+L
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSL 220
Query: 184 ISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGY-LKE--IEMGRMIHELVAG 240
ISGY + A+E L + M + G+ ++ SVL AC L E IE G IH A
Sbjct: 221 ISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAK 280
Query: 241 GRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRN---- 296
+ +I AL+DMY K GS+ EA +F M ++VVT+ +MI+G+ ++ +
Sbjct: 281 LGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASS 340
Query: 297 -ALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALI 355
A LF MQ G+ P+ T +L ACS+ L+ GR +HA K N + + + +ALI
Sbjct: 341 EAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALI 400
Query: 356 DMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDA 415
++YA + Q FA TSK+ W +++ V N A +LFRQ+ + P +
Sbjct: 401 ELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEY 460
Query: 416 TLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEI 475
T++ ++ A A A L I Y I+ G + V T I +Y+K G++ A+++F I
Sbjct: 461 TVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVF--I 518
Query: 476 PIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDE 535
+++ D+ +S +I+ HG A+++F+ M G++PN+ F L AC HGGL+ +
Sbjct: 519 EVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQ 578
Query: 536 GLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGAC 595
GL F M +++ H+TC+VDLLGR GRL +A +LI + + W ALL +C
Sbjct: 579 GLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSC 638
Query: 596 VIHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPA 655
++ + +G+ A+ L ELEPE G+YVLL +Y+ AE VR++M ++G++K PA
Sbjct: 639 RVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPA 698
Query: 656 HSLIEVRN 663
S I + N
Sbjct: 699 LSWIVIGN 706
Score = 219 bits (557), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 155/577 (26%), Positives = 282/577 (48%), Gaps = 49/577 (8%)
Query: 110 DNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVF 169
D+ Y I+ + LG HG ++ + + ++ N L+ MY E+ AR++F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 170 DAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIE 229
D M E +++S+N+LISGY + + ++A+ +F ++ ++ D + L CG +++
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD 165
Query: 230 MGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYA 289
+G ++H LV L + + N L+DMY KCG +++A +FDR ERD V+W S+I+GY
Sbjct: 166 LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 290 LNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACS---SLYYLKRGRSLHAWTIKQNLEC 346
G L L M +G+ + +GS+L AC + ++++G ++H +T K +E
Sbjct: 226 RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF 285
Query: 347 EVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVH-----NGLARKAVEL 401
+++V TAL+DMYAK +K + ++F+ K V +NA+++G + + + +A +L
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 402 FRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSK 461
F M +EP+ +T + +L A + L+ IH + + F S + + LI++Y+
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 405
Query: 462 CGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFT 521
GS E + F+ +DI W+ +I + + E+A LF+++ S ++P E T +
Sbjct: 406 MGSTEDGMQCFA--STSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVS 463
Query: 522 SALHACS-----------HGGLLDEGLDLF---------------NFMLENH-----QTC 550
+ AC+ G + G+D F N L N Q
Sbjct: 464 LMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNP 523
Query: 551 SRADHYTCIVDLLGRAGRLDEAYDLIRTMP---LKPTHAVWGALLGACVIHGNVELGEVA 607
A Y+ ++ L + G +EA ++ +M +KP + +L AC G V G
Sbjct: 524 DVAT-YSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKY 582
Query: 608 AKWL---FELEPENPGNYVLLSKLYSAVRRWKDAENV 641
+ + + + P N ++ L L R DAEN+
Sbjct: 583 FQCMKNDYRINP-NEKHFTCLVDLLGRTGRLSDAENL 618
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 211/674 (31%), Positives = 351/674 (52%), Gaps = 31/674 (4%)
Query: 4 PSHHTLPKTTHLVIKLVQQYAATKSIAGTKQLHAFIITSGPLF-THLRSSLVRAYG---H 59
P H T P +++ A + +H ++ +G + + ++LV YG
Sbjct: 185 PDHFTYPC-------VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF 237
Query: 60 VSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRL---GEYNPDNYTYPI 116
V++ LFD M ER+ +N+++++++ NG S +S + M+ G + PD T
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 117 VIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHS 176
V+ C LG +HG + D + + N L+ MY G + A+ +F +
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 357
Query: 177 VVSWNTLISGYFKNAYAKEALVVFDWMLKSG--VEPDCASVVSVLPACGY------LKEI 228
VVSWNT++ G+ V ML G V+ D ++++ +P C + LKE+
Sbjct: 358 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Query: 229 EMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGY 288
+ E V N NA V Y KCGS++ A+ VF + + V +W ++I G+
Sbjct: 418 HCYSLKQEFVY------NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGH 471
Query: 289 ALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEV 348
A + D R +L M+ G+ P+S T+ SLLSACS L L+ G+ +H + I+ LE ++
Sbjct: 472 AQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 531
Query: 349 IVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVE 408
V +++ +Y C + +F K V WN ++ G + NG +A+ +FRQM++
Sbjct: 532 FVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLY 591
Query: 409 VVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESA 468
++ ++ + A ++L L+ H Y +++ ++ LID+Y+K GS+ +
Sbjct: 592 GIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQS 651
Query: 469 HKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACS 528
K+F+ +K+K W+ +I GYG+HG + A+ LF+EM ++G P+++TF L AC+
Sbjct: 652 SKVFN--GLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Query: 529 HGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLI-RTMPLKPTHAV 587
H GL+ EGL + M + HY C++D+LGRAG+LD+A ++ M + +
Sbjct: 710 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGI 769
Query: 588 WGALLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDE 647
W +LL +C IH N+E+GE A LFELEPE P NYVLLS LY+ + +W+D VR M+E
Sbjct: 770 WKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNE 829
Query: 648 KGLRKAPAHSLIEV 661
LRK S IE+
Sbjct: 830 MSLRKDAGCSWIEL 843
Score = 279 bits (714), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 177/623 (28%), Positives = 316/623 (50%), Gaps = 20/623 (3%)
Query: 19 LVQQYAATKSIAGTKQLHAFIITSGPLFTH--LRSSLVRAY---GHVSNVRILFDEMSER 73
L+Q K I +++H + S L L + ++ Y G + R +FD + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 74 SSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIAL 133
+ F +N V+ Y++N + L+ F+ M+ + PD++TYP VIKAC ++ +G+A+
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 134 HGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYA 193
HG V+ TG D FVGN L++ Y G V A ++FD M E ++VSWN++I + N ++
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 194 KEALVVFDWMLKSGVE----PDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAA 249
+E+ ++ M++ + PD A++V+VLP C +EI +G+ +H RL K +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 250 WNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQF--E 307
NAL+DMY KCG + A+++F + ++VV+W +M+ G++ GD + + M E
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 308 GVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLS 367
V+ + +TI + + C +L + LH +++KQ +V A + YAKC + +
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYA 449
Query: 368 FQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAIL 427
+VF K WNA++ G + R +++ QM + + P+ T+ SLL A + L
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 509
Query: 428 ADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSV 487
L+ +H ++IR + V ++ +Y CG L + +F ++DK +V W+
Sbjct: 510 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD--AMEDKSLVSWNT 567
Query: 488 IIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENH 547
+I GY +G + A+ +F++MV G+Q ++ ACS L G + + L+ H
Sbjct: 568 VITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK-H 626
Query: 548 QTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVA 607
A ++D+ + G + ++ + + K T A W A++ IHG L + A
Sbjct: 627 LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST-ASWNAMIMGYGIHG---LAKEA 682
Query: 608 AKWLFELEP--ENPGNYVLLSKL 628
K E++ NP + L L
Sbjct: 683 IKLFEEMQRTGHNPDDLTFLGVL 705
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 348 bits (894), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 220/645 (34%), Positives = 352/645 (54%), Gaps = 17/645 (2%)
Query: 33 KQLHAFIITSGPLFTHL--RSSLVRAY---GHVSNVRILFDEMSERSSFLYNTVMKMYAQ 87
+Q+ I SG L T L S LV A+ G +S R +F++M R++ N +M +
Sbjct: 228 EQIMCTIQKSG-LLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR 286
Query: 88 NGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWR---KLGIALHGRVLITGF-D 143
++ K+F+ M + + +P++Y + LA K G +HG V+ TG D
Sbjct: 287 QKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVD 346
Query: 144 MDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWM 203
+GN L+ MY G + AR+VF M + VSWN++I+G +N EA+ + M
Sbjct: 347 FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 204 LKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSV 263
+ + P +++S L +C LK ++G+ IH + N++ NAL+ +Y + G +
Sbjct: 407 RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYL 466
Query: 264 NEARLVFDRMSERDVVTWTSMINGYALNG-DVRNALGLFQLMQFEGVRPNSLTIGSLLSA 322
NE R +F M E D V+W S+I A + + A+ F Q G + N +T S+LSA
Sbjct: 467 NECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSA 526
Query: 323 CSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKK-TVP 381
SSL + + G+ +H +K N+ E E ALI Y KC + ++F+R ++++ V
Sbjct: 527 VSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVT 586
Query: 382 WNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLI 441
WN++++G +HN L KA++L ML + ++L A+A +A L++ M +H +
Sbjct: 587 WNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSV 646
Query: 442 RYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETA 501
R S V V + L+D+YSKCG L+ A + F+ +P+++ W+ +I+GY HG GE A
Sbjct: 647 RACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS--YSWNSMISGYARHGQGEEA 704
Query: 502 VSLFKEMVQSG-VQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIV 560
+ LF+ M G P+ VTF L ACSH GLL+EG F M +++ R +H++C+
Sbjct: 705 LKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMA 764
Query: 561 DLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHG--NVELGEVAAKWLFELEPEN 618
D+LGRAG LD+ D I MP+KP +W +LGAC ELG+ AA+ LF+LEPEN
Sbjct: 765 DVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN 824
Query: 619 PGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVRN 663
NYVLL +Y+A RW+D R M + ++K +S + +++
Sbjct: 825 AVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKD 869
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/483 (29%), Positives = 236/483 (48%), Gaps = 36/483 (7%)
Query: 133 LHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAY 192
H R+ D D ++ N LI Y+ G+ +ARKVFD M + VSW ++SGY +N
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 193 AKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEM--GRMIHELVAGGRLGKNIAAW 250
KEALV M+K G+ + + VSVL AC + + + GR IH L+ +
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 251 NALVDMYVKC-GSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGV 309
N L+ MY KC GSV A F + ++ V+W S+I+ Y+ GD R+A +F MQ++G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 310 RPNSLTIGSLLSACSSLYY--LKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLS 367
RP T GSL++ SL ++ + K L ++ V + L+ +AK + +
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 368 FQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQM--LVEVVEPNDATLNSLLPAYA 425
+VF + + V N ++ G V +A +LF M +++V + L S P Y+
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYS 322
Query: 426 ILAD--LQQAMNIHCYLIRYGFLS-VVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDI 482
+ + L++ +H ++I G + +V + GL+++Y+KCGS+ A ++F + DKD
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF--YFMTDKDS 380
Query: 483 VVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACS-----------HGG 531
V W+ +I G +G AV +K M + + P T S+L +C+ HG
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 532 LLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGAL 591
L G+DL N + N ++ L G L+E + +MP + W ++
Sbjct: 441 SLKLGIDL-NVSVSN-----------ALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSI 487
Query: 592 LGA 594
+GA
Sbjct: 488 IGA 490
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 161/593 (27%), Positives = 291/593 (49%), Gaps = 29/593 (4%)
Query: 55 RAYGHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTY 114
+ G V F ++ ++S +N+++ +Y+Q G + ++F M G P YT+
Sbjct: 151 KCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS-RPTEYTF 209
Query: 115 -PIVIKACTDLAWRKLGIALHGRVLIT----GFDMDTFVGNCLIAMYMNFGEVKAARKVF 169
+V AC+ + + L +++ T G D FVG+ L++ + G + ARKVF
Sbjct: 210 GSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVF 266
Query: 170 DAMWEHSVVSWNTLISGYFKNAYAKEALVVF-DWMLKSGVEPDCASVV-SVLPACGYLKE 227
+ M + V+ N L+ G + + +EA +F D V P+ ++ S P +E
Sbjct: 267 NQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEE 326
Query: 228 IEM--GRMIH-ELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSM 284
+ + GR +H ++ G + + N LV+MY KCGS+ +AR VF M+++D V+W SM
Sbjct: 327 VGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSM 386
Query: 285 INGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNL 344
I G NG A+ ++ M+ + P S T+ S LS+C+SL + K G+ +H ++K +
Sbjct: 387 ITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGI 446
Query: 345 ECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLA-RKAVELFR 403
+ V V AL+ +YA+ + ++F+ + V WN+I+ + + +AV F
Sbjct: 447 DLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFL 506
Query: 404 QMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCG 463
+ N T +S+L A + L+ + IH ++ LI Y KCG
Sbjct: 507 NAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCG 566
Query: 464 SLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSA 523
++ KIFS + + +D V W+ +I+GY + A+ L M+Q+G + + + +
Sbjct: 567 EMDGCEKIFSRMAER-RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATV 625
Query: 524 LHACSHGGLLDEGLDLFNFMLENHQTCSRADHY--TCIVDLLGRAGRLDEAYDLIRTMPL 581
L A + L+ G+++ + + C +D + +VD+ + GRLD A TMP+
Sbjct: 626 LSAFASVATLERGMEVHACSV---RACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV 682
Query: 582 KPTHAVWGALLGACVIHGNVELGEVAAKWLFE---LEPENPGNYVLLSKLYSA 631
+ +++ W +++ HG GE A K LFE L+ + P ++V + SA
Sbjct: 683 RNSYS-WNSMISGYARHGQ---GEEALK-LFETMKLDGQTPPDHVTFVGVLSA 730
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 151/562 (26%), Positives = 258/562 (45%), Gaps = 24/562 (4%)
Query: 48 HLRSSLVRAY---GHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRL 104
+L ++L+ AY G + R +FDEM R+ + ++ Y++NG ++L M++
Sbjct: 37 YLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKE 96
Query: 105 GEYNPDNYTYPIVIKACTDLAWRKL--GIALHGRVLITGFDMDTFVGNCLIAMYMN-FGE 161
G ++ + Y + V++AC ++ + G +HG + + +D V N LI+MY G
Sbjct: 97 GIFS-NQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGS 155
Query: 162 VKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPA 221
V A F + + VSWN++IS Y + + A +F M G P + S++
Sbjct: 156 VGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTT 215
Query: 222 CGYLKEIEMGRMIHEL---VAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDV 278
L E ++ R++ ++ + L ++ + LV + K GS++ AR VF++M R+
Sbjct: 216 ACSLTEPDV-RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNA 274
Query: 279 VTWTSMINGYALNGDVRNALGLFQLMQ-FEGVRPNSLTIGSLLSACSSLYY-----LKRG 332
VT ++ G A LF M V P S I LLS+ LK+G
Sbjct: 275 VTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPEYSLAEEVGLKKG 332
Query: 333 RSLHAWTIKQNL-ECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVH 391
R +H I L + V + L++MYAKC + + +VF + K +V WN+++ G
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQ 392
Query: 392 NGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEV 451
NG +AVE ++ M + P TL S L + A L + IH ++ G V V
Sbjct: 393 NGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSV 452
Query: 452 STGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHG-ETAVSLFKEMVQ 510
S L+ +Y++ G L KIFS +P + D V W+ II AV F +
Sbjct: 453 SNALMTLYAETGYLNECRKIFSSMP--EHDQVSWNSIIGALARSERSLPEAVVCFLNAQR 510
Query: 511 SGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLD 570
+G + N +TF+S L A S + G + L+N+ A ++ G+ G +D
Sbjct: 511 AGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNN-IADEATTENALIACYGKCGEMD 569
Query: 571 EAYDLIRTMPLKPTHAVWGALL 592
+ M + + W +++
Sbjct: 570 GCEKIFSRMAERRDNVTWNSMI 591
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 137/282 (48%), Gaps = 7/282 (2%)
Query: 232 RMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALN 291
R H + RL K++ N L++ Y++ G AR VFD M R+ V+W +++GY+ N
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 292 GDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLK--RGRSLHAWTIKQNLECEVI 349
G+ + AL + M EG+ N S+L AC + + GR +H K + + +
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 350 VETALIDMYAKC-NLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVE 408
V LI MY KC V + F K +V WN+I++ G R A +F M +
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 409 VVEPNDATLNSLLPAYAILA--DLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLE 466
P + T SL+ L D++ I C + + G L+ + V +GL+ ++K GSL
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 467 SAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEM 508
A K+F++ ++ ++ V + ++ G GE A LF +M
Sbjct: 261 YARKVFNQ--METRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
>sp|Q9LJR6|PP253_ARATH Putative pentatricopeptide repeat-containing protein At3g25060,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3
SV=1
Length = 601
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 179/530 (33%), Positives = 305/530 (57%), Gaps = 4/530 (0%)
Query: 133 LHGRVLITGFDMD-TFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNA 191
+H V+ TG ++ + + LIA GE+ ARKVFD + + V +N++I Y +
Sbjct: 36 IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGK 95
Query: 192 YAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWN 251
E L ++D M+ ++PD ++ + AC +E G + ++ +
Sbjct: 96 NPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCS 155
Query: 252 ALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRP 311
+++++Y+KCG ++EA ++F +M++RDV+ WT+M+ G+A G A+ ++ MQ EG
Sbjct: 156 SVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGR 215
Query: 312 NSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVF 371
+ + + LL A L K GRS+H + + L V+VET+L+DMYAK ++++ +VF
Sbjct: 216 DRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVF 275
Query: 372 ARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQ 431
+R K V W ++++G NGLA KA E +M +P+ TL +L A + + L+
Sbjct: 276 SRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLK 335
Query: 432 QAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAG 491
+HCY+++ L V +T L+D+YSKCG+L S+ +IF + KD+V W+ +I+
Sbjct: 336 TGRLVHCYILKRHVLDRV-TATALMDMYSKCGALSSSREIFEHVG--RKDLVCWNTMISC 392
Query: 492 YGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCS 551
YG+HG+G+ VSLF +M +S ++P+ TF S L A SH GL+++G F+ M+ ++
Sbjct: 393 YGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQP 452
Query: 552 RADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWL 611
HY C++DLL RAGR++EA D+I + L +W ALL C+ H N+ +G++AA +
Sbjct: 453 SEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKI 512
Query: 612 FELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEV 661
+L P++ G L+S ++ +WK+ VR +M + K P +S IEV
Sbjct: 513 LQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEV 562
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 256/496 (51%), Gaps = 21/496 (4%)
Query: 6 HHTL--PKTTHLVIKLVQQYAATKSIAGTKQLHAFIITSGPLFTHLRSSLVR-------A 56
H TL PK IK +Q + K Q+HAF+I++G L SS+ R
Sbjct: 11 HRTLLCPKR----IKFLQSISKLKR--HITQIHAFVISTGNLLNG--SSISRDLIASCGR 62
Query: 57 YGHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPI 116
G +S R +FDE+ +R +YN+++ +Y++ + L+++ M+ + PD+ T+ +
Sbjct: 63 IGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIA-EKIQPDSSTFTM 121
Query: 117 VIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHS 176
IKAC + G A+ + + G+ D FV + ++ +YM G++ A +F M +
Sbjct: 122 TIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRD 181
Query: 177 VVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHE 236
V+ W T+++G+ + + +A+ + M G D ++ +L A G L + +MGR +H
Sbjct: 182 VICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHG 241
Query: 237 LVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRN 296
+ L N+ +LVDMY K G + A VF RM + V+W S+I+G+A NG
Sbjct: 242 YLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANK 301
Query: 297 ALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALID 356
A MQ G +P+ +T+ +L ACS + LK GR +H + +K+++ + + TAL+D
Sbjct: 302 AFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMD 360
Query: 357 MYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDAT 416
MY+KC + S ++F +K V WN +++ +G ++ V LF +M +EP+ AT
Sbjct: 361 MYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHAT 420
Query: 417 LNSLLPAYAILADLQQAMNIHCYLI-RYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEI 475
SLL A + ++Q + +I +Y + LID+ ++ G +E A + +
Sbjct: 421 FASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSE 480
Query: 476 PIKDKDIVVWSVIIAG 491
+ D + +W +++G
Sbjct: 481 KL-DNALPIWVALLSG 495
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 346 bits (887), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 189/550 (34%), Positives = 313/550 (56%), Gaps = 9/550 (1%)
Query: 114 YPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGE-VKAARKVFDAM 172
Y +++ C + GI H V+ +G + D VGN L+++Y G ++ R+VFD
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 173 WEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGR 232
+ +SW +++SGY +AL VF M+ G++ + ++ S + AC L E+ +GR
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 233 MIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNG 292
H +V N + L +Y +AR VFD M E DV+ WT++++ ++ N
Sbjct: 184 CFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKND 243
Query: 293 DVRNALGLFQLM-QFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVE 351
ALGLF M + +G+ P+ T G++L+AC +L LK+G+ +H I + V+VE
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 303
Query: 352 TALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVE 411
++L+DMY KC V+ + QVF SKK +V W+A+L G NG KA+E+FR+M E
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EE 359
Query: 412 PNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKI 471
+ ++L A A LA ++ IH +R G V V + LID+Y K G ++SA ++
Sbjct: 360 KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRV 419
Query: 472 FSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGG 531
+S++ I++ ++ W+ +++ +G GE AVS F +MV+ G++P+ ++F + L AC H G
Sbjct: 420 YSKMSIRN--MITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477
Query: 532 LLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGAL 591
++DEG + F M +++ +HY+C++DLLGRAG +EA +L+ + ++WG L
Sbjct: 478 MVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVL 537
Query: 592 LGACVIHGNV-ELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGL 650
LG C + + + E AK + ELEP+ +YVLLS +Y A+ R DA N+R +M +G+
Sbjct: 538 LGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGV 597
Query: 651 RKAPAHSLIE 660
K S I+
Sbjct: 598 AKTVGQSWID 607
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 256/497 (51%), Gaps = 13/497 (2%)
Query: 1 MNGPSHHTLPKTTHLVIKLVQQYAATKSIAGTKQLHAFIITSG-PLFTHLRSSLVRAYGH 59
+N +P T L L+Q S Q HA ++ SG ++ +SL+ Y
Sbjct: 49 LNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFK 108
Query: 60 VS----NVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYP 115
+ R +FD + + + ++M Y +L++F+ M+ G + + +T
Sbjct: 109 LGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFG-LDANEFTLS 167
Query: 116 IVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEH 175
+KAC++L +LG HG V+ GF+ + F+ + L +Y E AR+VFD M E
Sbjct: 168 SAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEP 227
Query: 176 SVVSWNTLISGYFKNAYAKEALVVFDWMLKS-GVEPDCASVVSVLPACGYLKEIEMGRMI 234
V+ W ++S + KN +EAL +F M + G+ PD ++ +VL ACG L+ ++ G+ I
Sbjct: 228 DVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEI 287
Query: 235 HELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDV 294
H + +G N+ ++L+DMY KCGSV EAR VF+ MS+++ V+W++++ GY NG+
Sbjct: 288 HGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEH 347
Query: 295 RNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETAL 354
A+ +F+ M+ + G++L AC+ L ++ G+ +H +++ VIVE+AL
Sbjct: 348 EKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESAL 403
Query: 355 IDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPND 414
ID+Y K + + +V+++ S + + WNA+L+ NG +AV F M+ + ++P+
Sbjct: 404 IDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDY 463
Query: 415 ATLNSLLPAYAILADLQQAMNIHCYLIR-YGFLSVVEVSTGLIDIYSKCGSLESAHKIFS 473
+ ++L A + + N + + YG E + +ID+ + G E A +
Sbjct: 464 ISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLE 523
Query: 474 EIPIKDKDIVVWSVIIA 490
++ D +W V++
Sbjct: 524 RAECRN-DASLWGVLLG 539
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 205/426 (48%), Gaps = 20/426 (4%)
Query: 35 LHAFIITSGPLFTH-LRSSLVRAYG---HVSNVRILFDEMSERSSFLYNTVMKMYAQNGA 90
H +IT G + H + S+L YG + R +FDEM E + V+ +++N
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDL 244
Query: 91 SHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGN 150
++L +F M R PD T+ V+ AC +L K G +HG+++ G + V +
Sbjct: 245 YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVES 304
Query: 151 CLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEP 210
L+ MY G V+ AR+VF+ M + + VSW+ L+ GY +N ++A+ +F M E
Sbjct: 305 SLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEK 360
Query: 211 DCASVVSVLPACGYLKEIEMGRMIH-ELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLV 269
D +VL AC L + +G+ IH + V G G N+ +AL+D+Y K G ++ A V
Sbjct: 361 DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG-NVIVESALIDLYGKSGCIDSASRV 419
Query: 270 FDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYL 329
+ +MS R+++TW +M++ A NG A+ F M +G++P+ ++ ++L+AC +
Sbjct: 420 YSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMV 479
Query: 330 KRGRSL-----HAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVP-WN 383
GR+ ++ IK E + +ID+ + L + + + R + W
Sbjct: 480 DEGRNYFVLMAKSYGIKPGTE----HYSCMIDLLGRAGLFEEAENLLERAECRNDASLWG 535
Query: 384 AILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRY 443
+L C N A + E + ++E+ + L Y + A+NI ++R
Sbjct: 536 VLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRR 595
Query: 444 GFLSVV 449
G V
Sbjct: 596 GVAKTV 601
>sp|O49680|PP324_ARATH Pentatricopeptide repeat-containing protein At4g19220,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E2 PE=3
SV=2
Length = 951
Score = 346 bits (887), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 205/646 (31%), Positives = 335/646 (51%), Gaps = 17/646 (2%)
Query: 33 KQLHAFIITSG---PLFTHLRSSLVRAY---GHVSNVRILFDEMSERSSFLYNTVMKMYA 86
+ LH +I SG + +S++ Y G +F+E+ R N ++ +A
Sbjct: 309 ESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFA 368
Query: 87 QNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDT 146
NG ++ + M + + PD T + C DL++ + G A+HG +
Sbjct: 369 ANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRA 428
Query: 147 F-VGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLK 205
V N +I MY G A +F +VSWN++IS + +N + +A +F ++
Sbjct: 429 LEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVS 488
Query: 206 --SGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSV 263
S + ++V+++L +C + G+ +H + G N+ + N++++MY+ C +
Sbjct: 489 EYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYIGCRDL 548
Query: 264 NEARLVFDRMSE-RDVVTWTSMINGYALNGDVRNALGLFQLMQFEG-VRPNSLTIGSLLS 321
A L + MSE RD+ +W S+I+G A +G +L FQ M EG +R + +T+ +S
Sbjct: 549 TSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTIS 608
Query: 322 ACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVP 381
A +L + +GR H IK E + ++ LI MY +C ++ + +VF S
Sbjct: 609 ASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCS 668
Query: 382 WNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLI 441
WN +++ N R+ +LFR + +EPN+ T LL A L M HC+LI
Sbjct: 669 WNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLI 725
Query: 442 RYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETA 501
R GF + VS L+D+YS CG LE+ K+F + I W+ +I+ +G HG GE A
Sbjct: 726 RRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNS--ISAWNSVISAHGFHGMGEKA 783
Query: 502 VSLFKEMV-QSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIV 560
+ LFKE+ S ++PN+ +F S L ACSH G +DEGL + M E +H IV
Sbjct: 784 MELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIV 843
Query: 561 DLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFELEPENPG 620
D+LGRAG+L EAY+ I + VWGALL AC HG+ +LG+ A+ LFE+EP+N
Sbjct: 844 DMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNAS 903
Query: 621 NYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVRNILT 666
Y+ L+ Y + W++A +R ++++ L+K P +S+I+VR + T
Sbjct: 904 YYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDVRCLDT 949
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 161/619 (26%), Positives = 288/619 (46%), Gaps = 55/619 (8%)
Query: 33 KQLHAFIITSGPLFTHLRSS-LVRAYGHVSNV---RILFDEMSERSSFLYNTVMKMYAQN 88
+ +H F + G L SS L+ YG + LFDE+ E+ ++N+++ QN
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 89 GASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFV 148
G ++ +F+ M+ G + RK + LH + TG D+ +
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSM-LHCLAIETGLVGDSSL 225
Query: 149 GNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGV 208
N L+ +Y + +A VF M +VSWNT+++ N + +++L F M SG
Sbjct: 226 CNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ 285
Query: 209 EPDCASVVSVLPACGYLKEIEMGRMIHELV--AGGRLGKNIAAWNALVDMYVKCGSVNEA 266
E D + V+ AC ++E+ +G +H LV +G +++ N+++ MY KCG A
Sbjct: 286 EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAA 345
Query: 267 RLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQ-FEGVRPNSLTIGSLLSACSS 325
VF+ + RDV++ +++NG+A NG A G+ MQ + ++P+ T+ S+ S C
Sbjct: 346 ETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGD 405
Query: 326 LYYLKRGRSLHAWTIKQNLECEVI-VETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNA 384
L + + GR++H +T++ ++ + V ++IDMY KC L + +F T+ + V WN+
Sbjct: 406 LSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNS 465
Query: 385 ILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQA------MNIHC 438
+++ NG KA LF+ EVV + SL AIL + ++HC
Sbjct: 466 MISAFSQNGFTHKAKNLFK----EVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHC 521
Query: 439 YLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHG 498
+L + GF + + +I++Y C L SA + E + +D+ W+ +I+G GH
Sbjct: 522 WLQKLGFGDNMLSANSVINMYIGCRDLTSAF-LRLETMSETRDLTSWNSVISGCASSGHH 580
Query: 499 ETAVSLFKEMVQSG-VQPNEVTFTSALHACSHGGLLDEG-------------LD--LFNF 542
++ F+ M + G ++ + +T + A + GL+ +G LD L N
Sbjct: 581 LESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNT 640
Query: 543 MLENHQTCSRAD---------------HYTCIVDLLG--RAGRLDEAYDLIRTMPLKPTH 585
++ + C + + C++ L +AGR E + L R + L+P
Sbjct: 641 LITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGR--EVFQLFRNLKLEPNE 698
Query: 586 AVWGALLGACVIHGNVELG 604
+ LL A G+ G
Sbjct: 699 ITFVGLLSASTQLGSTSYG 717
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 204/451 (45%), Gaps = 29/451 (6%)
Query: 168 VFDAMWEHSVVSWNTLISGYFKNAY--AKEALVVFDWMLKSGVEPDCASVVSVLP----- 220
+ D++ HS+ WN+ SGY N Y ++ F + S V P ++ LP
Sbjct: 24 IIDSL-RHSISRWNS-PSGYCSNYYFSKRKHKRHFTSSVLSPVTPIVHNLFDELPERENR 81
Query: 221 ----ACGYLK----------EIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEA 266
+ +L+ E E R +H L +++A + L+ Y + G + +
Sbjct: 82 TMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSS 141
Query: 267 RLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSL 326
+FD + E+DV+ W SMI NG A+GLF M +G +S T+ SA SSL
Sbjct: 142 SCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSL 201
Query: 327 YYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAIL 386
+ ++ LH I+ L + + AL+++YAK + + VF + V WN I+
Sbjct: 202 HLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIM 261
Query: 387 AGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFL 446
C+ NG RK+++ F+ M E + T + ++ A + + +L ++H +I+ G+
Sbjct: 262 TKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYS 321
Query: 447 SVVEVSTG--LIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSL 504
VS G +I +YSKCG E+A +F E+ +D++ + I+ G+ +G E A +
Sbjct: 322 PEAHVSVGNSIISMYSKCGDTEAAETVFEELVC--RDVISSNAILNGFAANGMFEEAFGI 379
Query: 505 FKEMVQ-SGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLL 563
+M +QP+ T S C EG + + + + ++D+
Sbjct: 380 LNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMY 439
Query: 564 GRAGRLDEAYDLIRTMPLKPTHAVWGALLGA 594
G+ G +A L +T + W +++ A
Sbjct: 440 GKCGLTTQAELLFKTTTHRDL-VSWNSMISA 469
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 190/574 (33%), Positives = 313/574 (54%), Gaps = 10/574 (1%)
Query: 93 DSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCL 152
+SL +F M R G + P+N+T+P V KAC LA +H ++ + F D FVG
Sbjct: 35 ESLLLFREMKR-GGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTAT 93
Query: 153 IAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDC 212
+ M++ V A KVF+ M E +WN ++SG+ ++ + +A +F M + + PD
Sbjct: 94 VDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDS 153
Query: 213 ASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNI--AAWNALVDMYVKCGSVNEARLVF 270
+V++++ + + K +++ +H + G RLG ++ N + Y KCG ++ A+LVF
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAV--GIRLGVDVQVTVANTWISTYGKCGDLDSAKLVF 211
Query: 271 DRMS--ERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYY 328
+ + +R VV+W SM Y++ G+ +A GL+ LM E +P+ T +L ++C +
Sbjct: 212 EAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPET 271
Query: 329 LKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAG 388
L +GR +H+ I + ++ I MY+K + +F + + V W +++G
Sbjct: 272 LTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISG 331
Query: 389 CVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGF-LS 447
G +A+ LF M+ +P+ TL SL+ L+ I YG
Sbjct: 332 YAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRD 391
Query: 448 VVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKE 507
V + LID+YSKCGS+ A IF P +K +V W+ +IAGY ++G A+ LF +
Sbjct: 392 NVMICNALIDMYSKCGSIHEARDIFDNTP--EKTVVTWTTMIAGYALNGIFLEALKLFSK 449
Query: 508 MVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAG 567
M+ +PN +TF + L AC+H G L++G + F+ M + + DHY+C+VDLLGR G
Sbjct: 450 MIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKG 509
Query: 568 RLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLSK 627
+L+EA +LIR M KP +WGALL AC IH NV++ E AA+ LF LEP+ YV ++
Sbjct: 510 KLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMAN 569
Query: 628 LYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEV 661
+Y+A W +R +M ++ ++K P S+I+V
Sbjct: 570 IYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQV 603
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 208/443 (46%), Gaps = 19/443 (4%)
Query: 166 RKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYL 225
R+++ SV +WN I E+L++F M + G EP+ + V AC L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 226 KEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMI 285
++ M+H + ++ A VDM+VKC SV+ A VF+RM ERD TW +M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 286 NGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLE 345
+G+ +G A LF+ M+ + P+S+T+ +L+ + S LK ++HA I+ ++
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 346 CEVIVETALIDMYAKC---NLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELF 402
+V V I Y KC + KL F+ R + V WN++ G A A L+
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAIDR-GDRTVVSWNSMFKAYSVFGEAFDAFGLY 244
Query: 403 RQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKC 462
ML E +P+ +T +L + L Q IH + I G +E I +YSK
Sbjct: 245 CLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKS 304
Query: 463 GSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTS 522
SA +F + + V W+V+I+GY G + A++LF M++SG +P+ VT S
Sbjct: 305 EDTCSARLLFD--IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLS 362
Query: 523 ALHACSHGGLLDEG------LDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLI 576
+ C G L+ G D++ +N C+ ++D+ + G + EA D+
Sbjct: 363 LISGCGKFGSLETGKWIDARADIYGCKRDNVMICN------ALIDMYSKCGSIHEARDIF 416
Query: 577 RTMPLKPTHAVWGALLGACVIHG 599
P K T W ++ ++G
Sbjct: 417 DNTPEK-TVVTWTTMIAGYALNG 438
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 225/454 (49%), Gaps = 22/454 (4%)
Query: 16 VIKLVQQYAATKSIAGTKQLHAFIITSG-PLFTHLRSSLVRAYGHVSNV---RILFD--E 69
V+ L+Q + KS+ + +HA I G + + ++ + YG ++ +++F+ +
Sbjct: 156 VMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAID 215
Query: 70 MSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKL 129
+R+ +N++ K Y+ G + D+ ++ MLR E+ PD T+ + +C +
Sbjct: 216 RGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLR-EEFKPDLSTFINLAASCQNPETLTQ 274
Query: 130 GIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFK 189
G +H + G D D N I+MY + +AR +FD M + VSW +ISGY +
Sbjct: 275 GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAE 334
Query: 190 NAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELV-AGGRLGKNIA 248
EAL +F M+KSG +PD +++S++ CG +E G+ I G N+
Sbjct: 335 KGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVM 394
Query: 249 AWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEG 308
NAL+DMY KCGS++EAR +FD E+ VVTWT+MI GYALNG AL LF M
Sbjct: 395 ICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 454
Query: 309 VRPNSLTIGSLLSACSSLYYLKRG-RSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLS 367
+PN +T ++L AC+ L++G H N+ + + ++D+ + ++ +
Sbjct: 455 YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEA 514
Query: 368 FQVFARTSKKKTVP-WNAILAGC-VHNG--LARKAVE-LFR---QMLVEVVE-PNDATLN 418
++ S K W A+L C +H +A +A E LF QM VE N
Sbjct: 515 LELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAA 574
Query: 419 SLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVS 452
+ +A + + + NI +Y SV++V+
Sbjct: 575 GMWDGFARIRSIMKQRNIK----KYPGESVIQVN 604
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 160/367 (43%), Gaps = 37/367 (10%)
Query: 278 VVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHA 337
V W I D +L LF+ M+ G PN+ T + AC+ L + +HA
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 338 WTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARK 397
IK +V V TA +DM+ KCN V + +VF R ++ WNA+L+G +G K
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDK 136
Query: 398 AVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLID 457
A LFR+M + + P+ T+ +L+ + + L+ +H IR G V V+ I
Sbjct: 137 AFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIS 196
Query: 458 IYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNE 517
Y KCG L+SA +F I D+ +V W+ + Y + G A L+ M++ +P+
Sbjct: 197 TYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDL 256
Query: 518 VTFTSALHAC------SHGGLL---------DEGLDLFNFML----ENHQTCS------- 551
TF + +C + G L+ D+ ++ N + ++ TCS
Sbjct: 257 STFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDI 316
Query: 552 ----RADHYTCIVDLLGRAGRLDEAYDLIRTM---PLKPTHAVWGALLGACVIHGNVELG 604
+T ++ G +DEA L M KP +L+ C G++E G
Sbjct: 317 MTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG 376
Query: 605 EVAAKWL 611
KW+
Sbjct: 377 ----KWI 379
>sp|Q9MA85|PP215_ARATH Pentatricopeptide repeat-containing protein At3g05340
OS=Arabidopsis thaliana GN=PCMP-E83 PE=2 SV=2
Length = 658
Score = 344 bits (882), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 192/516 (37%), Positives = 290/516 (56%), Gaps = 3/516 (0%)
Query: 148 VGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSG 207
V N L+++Y G++ A K+FD M V+S N + G+ +N + V+ ML SG
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 208 VEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEAR 267
D A++ VL C + + +MIH L K I+ N L+ Y KCG R
Sbjct: 152 -GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 268 LVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLY 327
VFD MS R+V+T T++I+G N + L LF LM+ V PNS+T S L+ACS
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 328 YLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILA 387
+ G+ +HA K +E E+ +E+AL+DMY+KC ++ ++ +F T++ V IL
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 388 GCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLS 447
G NG +A++ F +ML VE + ++++L I L +H +I+ F
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSG 390
Query: 448 VVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKE 507
V+ GLI++YSKCG L + +F +P ++ V W+ +IA + HGHG A+ L++E
Sbjct: 391 NTFVNNGLINMYSKCGDLTDSQTVFRRMP--KRNYVSWNSMIAAFARHGHGLAALKLYEE 448
Query: 508 MVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAG 567
M V+P +VTF S LHACSH GL+D+G +L N M E H R +HYTCI+D+LGRAG
Sbjct: 449 MTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAG 508
Query: 568 RLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLSK 627
L EA I ++PLKP +W ALLGAC HG+ E+GE AA+ LF+ P++ ++L++
Sbjct: 509 LLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIAN 568
Query: 628 LYSAVRRWKDAENVRDVMDEKGLRKAPAHSLIEVRN 663
+YS+ +WK+ M G+ K S IE+ +
Sbjct: 569 IYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEH 604
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 216/462 (46%), Gaps = 4/462 (0%)
Query: 52 SLVRAYGHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDN 111
SL G + + LFDEM R N V + +N + + ML G + D+
Sbjct: 98 SLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF--DH 155
Query: 112 YTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDA 171
T IV+ C + + +H +++G+D + VGN LI Y G + R VFD
Sbjct: 156 ATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDG 215
Query: 172 MWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMG 231
M +V++ +ISG +N ++ L +F M + V P+ + +S L AC + I G
Sbjct: 216 MSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEG 275
Query: 232 RMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALN 291
+ IH L+ + + +AL+DMY KCGS+ +A +F+ +E D V+ T ++ G A N
Sbjct: 276 QQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQN 335
Query: 292 GDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVE 351
G A+ F M GV ++ + ++L L G+ LH+ IK+ V
Sbjct: 336 GSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVN 395
Query: 352 TALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVE 411
LI+MY+KC + S VF R K+ V WN+++A +G A++L+ +M V+
Sbjct: 396 NGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVK 455
Query: 412 PNDATLNSLLPAYAILADLQQAMNIHCYLIR-YGFLSVVEVSTGLIDIYSKCGSLESAHK 470
P D T SLL A + + + + + + +G E T +ID+ + G L+ A
Sbjct: 456 PTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKS 515
Query: 471 IFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSG 512
+P+K D +W ++ HG E +++ Q+
Sbjct: 516 FIDSLPLK-PDCKIWQALLGACSFHGDTEVGEYAAEQLFQTA 556
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 168/354 (47%), Gaps = 5/354 (1%)
Query: 247 IAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQF 306
+ WN+L+ +Y KCG + +A +FD M RDV++ + G+ N + + L + M
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 307 EGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKL 366
G ++ T+ +LS C + + + +HA I + E+ V LI Y KC
Sbjct: 150 SGGFDHA-TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 367 SFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAI 426
VF S + + A+++G + N L + LF M +V PN T S L A +
Sbjct: 209 GRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSG 268
Query: 427 LADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWS 486
+ + IH L +YG S + + + L+D+YSKCGS+E A IF + D V +
Sbjct: 269 SQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES--TTEVDEVSMT 326
Query: 487 VIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLEN 546
VI+ G +G E A+ F M+Q+GV+ + ++ L L G L + +++
Sbjct: 327 VILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKR 386
Query: 547 HQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGN 600
+ + + ++++ + G L ++ + R MP K + W +++ A HG+
Sbjct: 387 KFSGNTFVN-NGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGH 438
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 194/494 (39%), Positives = 291/494 (58%), Gaps = 11/494 (2%)
Query: 177 VVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHE 236
V SWN++I+ ++ + EAL+ F M K + P +S + AC L +I G+ H+
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 237 LVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRN 296
+I +AL+ MY CG + +AR VFD + +R++V+WTSMI GY LNG+ +
Sbjct: 101 QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALD 160
Query: 297 ALGLFQLM------QFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIV 350
A+ LF+ + + + +S+ + S++SACS + S+H++ IK+ + V V
Sbjct: 161 AVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSV 220
Query: 351 ETALIDMYAKCNL--VKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLV- 407
L+D YAK V ++ ++F + K V +N+I++ +G++ +A E+FR+++
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKN 280
Query: 408 EVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLES 467
+VV N TL+++L A + L+ IH +IR G V V T +ID+Y KCG +E+
Sbjct: 281 KVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVET 340
Query: 468 AHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHAC 527
A K F + K+K++ W+ +IAGYGMHGH A+ LF M+ SGV+PN +TF S L AC
Sbjct: 341 ARKAFDRM--KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 528 SHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAV 587
SH GL EG FN M +HY C+VDLLGRAG L +AYDLI+ M +KP +
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 588 WGALLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDE 647
W +LL AC IH NVEL E++ LFEL+ N G Y+LLS +Y+ RWKD E VR +M
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKN 518
Query: 648 KGLRKAPAHSLIEV 661
+GL K P SL+E+
Sbjct: 519 RGLVKPPGFSLLEL 532
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 239/451 (52%), Gaps = 13/451 (2%)
Query: 62 NVRILFDEMSERSS-FLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKA 120
N+ LF+ +++ F +N+V+ A++G S ++L F M +L Y P ++P IKA
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLY-PTRSSFPCAIKA 85
Query: 121 CTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSW 180
C+ L G H + + G+ D FV + LI MY G+++ ARKVFD + + ++VSW
Sbjct: 86 CSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSW 145
Query: 181 NTLISGYFKNAYAKEALVVFDWMLKSGVEPDCA------SVVSVLPACGYLKEIEMGRMI 234
++I GY N A +A+ +F +L + D A +VSV+ AC + + I
Sbjct: 146 TSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESI 205
Query: 235 HELVAGGRLGKNIAAWNALVDMYVKCGS--VNEARLVFDRMSERDVVTWTSMINGYALNG 292
H V + ++ N L+D Y K G V AR +FD++ ++D V++ S+++ YA +G
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG 265
Query: 293 DVRNALGLF-QLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVE 351
A +F +L++ + V N++T+ ++L A S L+ G+ +H I+ LE +VIV
Sbjct: 266 MSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVG 325
Query: 352 TALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVE 411
T++IDMY KC V+ + + F R K W A++AG +G A KA+ELF M+ V
Sbjct: 326 TSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVR 385
Query: 412 PNDATLNSLLPAYAILA-DLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHK 470
PN T S+L A + ++ + R+G +E ++D+ + G L+ A+
Sbjct: 386 PNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYD 445
Query: 471 IFSEIPIKDKDIVVWSVIIAGYGMHGHGETA 501
+ + +K D ++WS ++A +H + E A
Sbjct: 446 LIQRMKMK-PDSIIWSSLLAACRIHKNVELA 475
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 175/362 (48%), Gaps = 29/362 (8%)
Query: 269 VFDRMSER-DVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLY 327
+F+R ++ DV +W S+I A +GD AL F M+ + P + + ACSSL+
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 328 YLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILA 387
+ G+ H + ++ V +ALI MY+ C ++ + +VF K+ V W +++
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 388 GCVHNGLARKAVELFRQMLVEVVEPNDAT------LNSLLPAYAILADLQQAMNIHCYLI 441
G NG A AV LF+ +LV+ + +DA L S++ A + + +IH ++I
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 442 RYGFLSVVEVSTGLIDIYSKCGS--LESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGE 499
+ GF V V L+D Y+K G + A KIF +I DKD V ++ I++ Y G
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIV--DKDRVSYNSIMSVYAQSGMSN 268
Query: 500 TAVSLFKEMVQSGVQP-NEVTFTSALHACSHGGLLDEGL----DLFNFMLENHQTCSRAD 554
A +F+ +V++ V N +T ++ L A SH G L G + LE+
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVG--- 325
Query: 555 HYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFEL 614
T I+D+ + GR++ A M K + W A++ +HG+ AAK L EL
Sbjct: 326 --TSIIDMYCKCGRVETARKAFDRMKNKNVRS-WTAMIAGYGMHGH------AAKAL-EL 375
Query: 615 EP 616
P
Sbjct: 376 FP 377
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 146/273 (53%), Gaps = 12/273 (4%)
Query: 32 TKQLHAFIITSG-PLFTHLRSSLVRAY-----GHVSNVRILFDEMSERSSFLYNTVMKMY 85
T+ +H+F+I G + ++L+ AY G V+ R +FD++ ++ YN++M +Y
Sbjct: 202 TESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVY 261
Query: 86 AQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMD 145
AQ+G S+++ ++F +++ + T V+ A + ++G +H +V+ G + D
Sbjct: 262 AQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDD 321
Query: 146 TFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLK 205
VG +I MY G V+ ARK FD M +V SW +I+GY + +A +AL +F M+
Sbjct: 322 VIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID 381
Query: 206 SGVEPDCASVVSVLPACGYLK-EIEMGRMIHELVAGGRLG--KNIAAWNALVDMYVKCGS 262
SGV P+ + VSVL AC + +E R + + GR G + + +VD+ + G
Sbjct: 382 SGVRPNYITFVSVLAACSHAGLHVEGWRWFNAM--KGRFGVEPGLEHYGCMVDLLGRAGF 439
Query: 263 VNEARLVFDRMSER-DVVTWTSMINGYALNGDV 294
+ +A + RM + D + W+S++ ++ +V
Sbjct: 440 LQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNV 472
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 343 bits (880), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 203/622 (32%), Positives = 339/622 (54%), Gaps = 14/622 (2%)
Query: 33 KQLHAFIITSG-PLFTHLRSSLVRAY---GHVSNVRILFDEMSERSSFLYNTVMKMYAQN 88
+Q+ + SG F ++++SL+ Y G V++ ++LFDEM ER + ++N ++ Y++N
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 89 GASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFV 148
G D+ K+F+ ML+ G ++P T ++ C + G ++HG +G ++D+ V
Sbjct: 130 GYECDAWKLFIVMLQQG-FSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 149 GNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGV 208
N LI+ Y E+ +A +F M + S VSWNT+I Y ++ +EA+ VF M + V
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Query: 209 EPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARL 268
E +++++L A ++ +H LV + +I+ +LV Y +CG + A
Sbjct: 249 EISPVTIINLLSA--HVSH----EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAER 302
Query: 269 VFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYY 328
++ + +V TS+++ YA GD+ A+ F + ++ +++ + +L C +
Sbjct: 303 LYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSH 362
Query: 329 LKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAG 388
+ G SLH + IK L + +V LI MY+K + V+ +F + + + WN++++G
Sbjct: 363 IDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISG 422
Query: 389 CVHNGLARKAVELFRQMLVEV-VEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLS 447
CV +G A A E+F QM++ + P+ T+ SLL + L L +H Y +R F +
Sbjct: 423 CVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFEN 482
Query: 448 VVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKE 507
V T LID+Y+KCG+ A +F I K W+ +I+GY + G A+S + E
Sbjct: 483 ENFVCTALIDMYAKCGNEVQAESVFKSI--KAPCTATWNSMISGYSLSGLQHRALSCYLE 540
Query: 508 MVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAG 567
M + G++P+E+TF L AC+HGG +DEG F M++ HY +V LLGRA
Sbjct: 541 MREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRAC 600
Query: 568 RLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLSK 627
EA LI M +KP AVWGALL AC+IH +E+GE A+ +F L+ +N G YVL+S
Sbjct: 601 LFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSN 660
Query: 628 LYSAVRRWKDAENVRDVMDEKG 649
LY+ W D VR++M + G
Sbjct: 661 LYATEAMWDDVVRVRNMMKDNG 682
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 14/242 (5%)
Query: 382 WNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILAD--LQQAMNIHCY 439
++++L C+H ++ + +FR +L + PN T++ L A + Q + +
Sbjct: 16 FHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTH 75
Query: 440 LIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGE 499
L + G V V T L+++Y K G + SA +F E+P ++D VVW+ +I GY +G+
Sbjct: 76 LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMP--ERDTVVWNALICGYSRNGYEC 133
Query: 500 TAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFM----LENHQTCSRADH 555
A LF M+Q G P+ T + L C G + +G + LE A
Sbjct: 134 DAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNA-- 191
Query: 556 YTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFELE 615
++ + L A L R M K T + W ++GA G E K +FE
Sbjct: 192 ---LISFYSKCAELGSAEVLFREMKDKSTVS-WNTMIGAYSQSGLQEEAITVFKNMFEKN 247
Query: 616 PE 617
E
Sbjct: 248 VE 249
>sp|Q9LT48|PP244_ARATH Pentatricopeptide repeat-containing protein At3g20730
OS=Arabidopsis thaliana GN=PCMP-E94 PE=2 SV=1
Length = 565
Score = 343 bits (880), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 191/551 (34%), Positives = 305/551 (55%), Gaps = 7/551 (1%)
Query: 114 YPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMW 173
Y +K C+ +K + +HG + GF + + + LI +Y+ G+VK ARK+FD +
Sbjct: 16 YLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRIS 75
Query: 174 EHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRM 233
+ VVSW +IS + + Y +AL++F M + V+ + + SVL +C L ++ G
Sbjct: 76 KRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQ 135
Query: 234 IHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGD 293
IH V G N+ +AL+ +Y +CG + EARL FD M ERD+V+W +MI+GY N
Sbjct: 136 IHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANAC 195
Query: 294 VRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETA 353
+ LFQLM EG +P+ T GSLL A + L+ LH IK + +
Sbjct: 196 ADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRS 255
Query: 354 LIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAG-CVHNGLARKAVELFRQMLVEVVEP 412
L++ Y KC + ++++ T K+ + A++ G N A ++F+ M+ +
Sbjct: 256 LVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKM 315
Query: 413 NDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSV-VEVSTGLIDIYSKCGSLESAHKI 471
++ ++S+L +A + IH + ++ + V + LID+Y+K G +E A
Sbjct: 316 DEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLA 375
Query: 472 FSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGG 531
F E +K+KD+ W+ +IAGYG HG+ E A+ L+ M ++PN+VTF S L ACSH G
Sbjct: 376 FEE--MKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTG 433
Query: 532 LLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMP--LKPTHAVWG 589
+ G +++ M+ H +R +H +CI+D+L R+G L+EAY LIR+ + + + WG
Sbjct: 434 QTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWG 493
Query: 590 ALLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKG 649
A L AC HGNV+L +VAA L +EP P NY+ L+ +Y+A W +A N R +M E G
Sbjct: 494 AFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESG 553
Query: 650 -LRKAPAHSLI 659
KAP +SL+
Sbjct: 554 SCNKAPGYSLV 564
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/539 (27%), Positives = 275/539 (51%), Gaps = 23/539 (4%)
Query: 35 LHAFIITSGPLFT-HLRSSLVRAY---GHVSNVRILFDEMSERSSFLYNTVMKMYAQNGA 90
+H IT+G L+ L+ Y G V + R LFD +S+R + ++ +++ G
Sbjct: 35 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 94
Query: 91 SHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGN 150
D+L +F M R + + +TY V+K+C DL K G+ +HG V + V +
Sbjct: 95 HPDALLLFKEMHR-EDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS 153
Query: 151 CLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEP 210
L+++Y G+++ AR FD+M E +VSWN +I GY NA A + +F ML G +P
Sbjct: 154 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKP 213
Query: 211 DCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEARLVF 270
DC + S+L A +K +E+ +H L G++ A +LV+ YVKCGS+ A +
Sbjct: 214 DCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLH 273
Query: 271 DRMSERDVVTWTSMINGYA-LNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYL 329
+ +RD+++ T++I G++ N +A +F+ M + + + + S+L C+++ +
Sbjct: 274 EGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASV 333
Query: 330 KRGRSLHAWTIKQN-LECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAILAG 388
GR +H + +K + + +V + +LIDMYAK ++ + F +K W +++AG
Sbjct: 334 TIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAG 393
Query: 389 CVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLI-RYGFLS 447
+G KA++L+ +M E ++PND T SLL A + + I+ +I ++G +
Sbjct: 394 YGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEA 453
Query: 448 VVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVV------WSVIIAGYGMHGHGETA 501
E + +ID+ ++ G LE A+ + I+ K+ +V W + HG+ + +
Sbjct: 454 REEHLSCIIDMLARSGYLEEAYAL-----IRSKEGIVSLSSSTWGAFLDACRRHGNVQLS 508
Query: 502 VSLFKEMVQSGVQPNE-VTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCI 559
+++ ++P + V + + + G D L+ M E+ +C++A Y+ +
Sbjct: 509 KVAATQLLS--MEPRKPVNYINLASVYAANGAWDNALNTRKLMKES-GSCNKAPGYSLV 564
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 343 bits (879), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 199/633 (31%), Positives = 339/633 (53%), Gaps = 14/633 (2%)
Query: 33 KQLHAFIITSGPLFTHLRSSLVRAY---GHVSNVRILFDEMSERSSFLYNTVMKMYAQNG 89
K + A +I G + +++V Y GH++ +F + S + ++ Y ++
Sbjct: 271 KVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSN 330
Query: 90 ASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVG 149
+ +L++F M G +N T VI AC + +H V +GF +D+ V
Sbjct: 331 DAFSALEIFKEMRHSG-VEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVA 389
Query: 150 NCLIAMYMNFGEVKAARKVF---DAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKS 206
LI+MY G++ + +VF D + ++V N +I+ + ++ +A+ +F ML+
Sbjct: 390 AALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQE 447
Query: 207 GVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNALVDMYVKCGSVNEA 266
G+ D SV S+L L + +G+ +H L ++ ++L +Y KCGS+ E+
Sbjct: 448 GLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEES 504
Query: 267 RLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSL 326
+F + +D W SMI+G+ G +R A+GLF M +G P+ T+ ++L+ CSS
Sbjct: 505 YKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSH 564
Query: 327 YYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPWNAIL 386
L RG+ +H +T++ ++ + + +AL++MY+KC +KL+ QV+ R + V ++++
Sbjct: 565 PSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLI 624
Query: 387 AGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFL 446
+G +GL + LFR M++ + ++S+L A A+ + +H Y+ + G
Sbjct: 625 SGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLC 684
Query: 447 SVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFK 506
+ V + L+ +YSK GS++ K FS+I D++ W+ +IA Y HG A+ ++
Sbjct: 685 TEPSVGSSLLTMYSKFGSIDDCCKAFSQI--NGPDLIAWTALIASYAQHGKANEALQVYN 742
Query: 507 EMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRA 566
M + G +P++VTF L ACSHGGL++E N M++++ HY C+VD LGR+
Sbjct: 743 LMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRS 802
Query: 567 GRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELGEVAAKWLFELEPENPGNYVLLS 626
GRL EA I M +KP VWG LL AC IHG VELG+VAAK ELEP + G Y+ LS
Sbjct: 803 GRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLS 862
Query: 627 KLYSAVRRWKDAENVRDVMDEKGLRKAPAHSLI 659
+ + V W + E R +M G++K P S +
Sbjct: 863 NILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 163/567 (28%), Positives = 271/567 (47%), Gaps = 17/567 (2%)
Query: 44 PLFTHLRSSLVRAY---GHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLG 100
P L SL+ Y G +++ LFD + + N ++ Y Q+ +SL+ F
Sbjct: 81 PFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSK 140
Query: 101 MLRLGEYNPDNYTYPIVIKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFG 160
M LG + + +Y VI AC+ L + + G+ V + LI ++
Sbjct: 141 MHFLG-FEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNL 199
Query: 161 EVKAARKVFDAMWEHSVVSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLP 220
+ A KVF +V WNT+I+G +N +F M +PD + SVL
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 221 ACGYLKEIEMGRMIHELVAGGRLG-KNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVV 279
AC L+++ G+++ V + G +++ A+VD+Y KCG + EA VF R+ VV
Sbjct: 260 ACASLEKLRFGKVVQARVI--KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVV 317
Query: 280 TWTSMINGYALNGDVRNALGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWT 339
+WT M++GY + D +AL +F+ M+ GV N+ T+ S++SAC + +HAW
Sbjct: 318 SWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWV 377
Query: 340 IKQNLECEVIVETALIDMYAKCNLVKLSFQVFARTSK-KKTVPWNAILAGCVHNGLARKA 398
K + V ALI MY+K + LS QVF ++ N ++ + KA
Sbjct: 378 FKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKA 437
Query: 399 VELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDI 458
+ LF +ML E + ++ ++ SLL ++L L +H Y ++ G + + V + L +
Sbjct: 438 IRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTL 494
Query: 459 YSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEV 518
YSKCGSLE ++K+F IP KD W+ +I+G+ +G+ A+ LF EM+ G P+E
Sbjct: 495 YSKCGSLEESYKLFQGIPFKDN--ACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDES 552
Query: 519 TFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRT 578
T + L CS L G ++ + L D + +V++ + G L A +
Sbjct: 553 TLAAVLTVCSSHPSLPRGKEIHGYTLRAGID-KGMDLGSALVNMYSKCGSLKLARQVYDR 611
Query: 579 MP-LKPTHAVWGALLGACVIHGNVELG 604
+P L P +L+ HG ++ G
Sbjct: 612 LPELDPVSC--SSLISGYSQHGLIQDG 636
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 123/272 (45%), Gaps = 10/272 (3%)
Query: 324 SSLYYLKRGRSLHAWTIKQNL-ECEVIVETALIDMYAKCNLVKLSFQVFARTSKKKTVPW 382
S L L+ + L A +++ L +V + +L+ Y+ + + ++F + V
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 383 NAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQAMNIHCYLIR 442
N +++G + L +++ F +M E N+ + S++ A + L + + C+ I+
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 443 YGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYGMHGHGETAV 502
G+ V + LID++SK E A+K+F + ++ W+ IIAG + +
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYKVFRD--SLSANVYCWNTIIAGALRNQNYGAVF 236
Query: 503 SLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEGLDLFNFMLENHQTCSRADHYTC--IV 560
LF EM +P+ T++S L AC+ E L + C D + C IV
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAACASL----EKLRFGKVVQARVIKCGAEDVFVCTAIV 292
Query: 561 DLLGRAGRLDEAYDLIRTMPLKPTHAVWGALL 592
DL + G + EA ++ +P P+ W +L
Sbjct: 293 DLYAKCGHMAEAMEVFSRIP-NPSVVSWTVML 323
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 342 bits (878), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 209/671 (31%), Positives = 346/671 (51%), Gaps = 22/671 (3%)
Query: 4 PSHHTLPKTTHLVIKLVQQYAATKSIAGTKQLHAFIITSGPLFT---HLRSSLVRAY--- 57
P T P L++ A+ + ++ +H ++ +G F+ ++ SSLV Y
Sbjct: 44 PDTFTFPS-------LLKACASLQRLSFGLSIHQQVLVNG--FSSDFYISSSLVNLYAKF 94
Query: 58 GHVSNVRILFDEMSERSSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIV 117
G +++ R +F+EM ER + ++ Y++ G ++ + + +R P T +
Sbjct: 95 GLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSL-VNEMRFQGIKPGPVTLLEM 153
Query: 118 IKACTDLAWRKLGIALHGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSV 177
+ ++ + LH +I GFD D V N ++ +Y V A+ +FD M + +
Sbjct: 154 LSGVLEITQLQ---CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDM 210
Query: 178 VSWNTLISGYFKNAYAKEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHEL 237
VSWNT+ISGY E L + M G+ PD + + L G + ++EMGRM+H
Sbjct: 211 VSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQ 270
Query: 238 VAGGRLGKNIAAWNALVDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNA 297
+ ++ AL+ MY+KCG + V + + +DVV WT MI+G G A
Sbjct: 271 IVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKA 330
Query: 298 LGLFQLMQFEGVRPNSLTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDM 357
L +F M G +S I S++++C+ L G S+H + ++ + +LI M
Sbjct: 331 LIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITM 390
Query: 358 YAKCNLVKLSFQVFARTSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDA-T 416
YAKC + S +F R +++ V WNAI++G N KA+ LF +M + V+ D+ T
Sbjct: 391 YAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFT 450
Query: 417 LNSLLPAYAILADLQQAMNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIP 476
+ SLL A + L IHC +IR V T L+D+YSKCG LE+A + F I
Sbjct: 451 VVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSIS 510
Query: 477 IKDKDIVVWSVIIAGYGMHGHGETAVSLFKEMVQSGVQPNEVTFTSALHACSHGGLLDEG 536
KD +V W ++IAGYG HG G+ A+ ++ E + SG++PN V F + L +CSH G++ +G
Sbjct: 511 WKD--VVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQG 568
Query: 537 LDLFNFMLENHQTCSRADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACV 596
L +F+ M+ + +H C+VDLL RA R+++A+ + +P+ V G +L AC
Sbjct: 569 LKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACR 628
Query: 597 IHGNVELGEVAAKWLFELEPENPGNYVLLSKLYSAVRRWKDAENVRDVMDEKGLRKAPAH 656
+G E+ ++ + + EL+P + G+YV L ++A++RW D + M GL+K P
Sbjct: 629 ANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGW 688
Query: 657 SLIEVRNILTA 667
S IE+ T
Sbjct: 689 SKIEMNGKTTT 699
Score = 263 bits (673), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 163/549 (29%), Positives = 287/549 (52%), Gaps = 13/549 (2%)
Query: 74 SSFLYNTVMKMYAQNGASHDSLKMFLGMLRLGEYNPDNYTYPIVIKACTDLAWRKLGIAL 133
S+ +N+ + + +G L F ML + PD +T+P ++KAC L G+++
Sbjct: 10 STKYFNSHINHLSSHGDHKQVLSTFSSMLA-NKLLPDTFTFPSLLKACASLQRLSFGLSI 68
Query: 134 HGRVLITGFDMDTFVGNCLIAMYMNFGEVKAARKVFDAMWEHSVVSWNTLISGYFKNAYA 193
H +VL+ GF D ++ + L+ +Y FG + ARKVF+ M E VV W +I Y +
Sbjct: 69 HQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIV 128
Query: 194 KEALVVFDWMLKSGVEPDCASVVSVLPACGYLKEIEMGRMIHELVAGGRLGKNIAAWNAL 253
EA + + M G++P +++ +L + EI + +H+ +IA N++
Sbjct: 129 GEACSLVNEMRFQGIKPGPVTLLEMLSG---VLEITQLQCLHDFAVIYGFDCDIAVMNSM 185
Query: 254 VDMYVKCGSVNEARLVFDRMSERDVVTWTSMINGYALNGDVRNALGLFQLMQFEGVRPNS 313
+++Y KC V +A+ +FD+M +RD+V+W +MI+GYA G++ L L M+ +G+RP+
Sbjct: 186 LNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQ 245
Query: 314 LTIGSLLSACSSLYYLKRGRSLHAWTIKQNLECEVIVETALIDMYAKCNLVKLSFQVFAR 373
T G+ LS ++ L+ GR LH +K + ++ ++TALI MY KC + S++V
Sbjct: 246 QTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLET 305
Query: 374 TSKKKTVPWNAILAGCVHNGLARKAVELFRQMLVEVVEPNDATLNSLLPAYAILADLQQA 433
K V W +++G + G A KA+ +F +ML + + + S++ + A L
Sbjct: 306 IPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365
Query: 434 MNIHCYLIRYGFLSVVEVSTGLIDIYSKCGSLESAHKIFSEIPIKDKDIVVWSVIIAGYG 493
++H Y++R+G+ LI +Y+KCG L+ + IF + ++D+V W+ II+GY
Sbjct: 366 ASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFER--MNERDLVSWNAIISGYA 423
Query: 494 MHGHGETAVSLFKEMVQSGVQP-NEVTFTSALHACSHGGLLDEGLDLFNFMLENH-QTCS 551
+ A+ LF+EM VQ + T S L ACS G L G + ++ + + CS
Sbjct: 424 QNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCS 483
Query: 552 RADHYTCIVDLLGRAGRLDEAYDLIRTMPLKPTHAVWGALLGACVIHGNVELG-EVAAKW 610
D T +VD+ + G L+ A ++ K WG L+ HG ++ E+ +++
Sbjct: 484 LVD--TALVDMYSKCGYLEAAQRCFDSISWKDV-VSWGILIAGYGFHGKGDIALEIYSEF 540
Query: 611 LFE-LEPEN 618
L +EP +
Sbjct: 541 LHSGMEPNH 549
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241,346,143
Number of Sequences: 539616
Number of extensions: 9905032
Number of successful extensions: 30635
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 20352
Number of HSP's gapped (non-prelim): 2275
length of query: 667
length of database: 191,569,459
effective HSP length: 124
effective length of query: 543
effective length of database: 124,657,075
effective search space: 67688791725
effective search space used: 67688791725
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)