BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005969
(667 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359485428|ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g58590-like [Vitis vinifera]
Length = 921
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/658 (65%), Positives = 527/658 (80%), Gaps = 1/658 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M RNVVS+N+II YSR G VE+A +F M GFEPTQ TF GLLSC SL +G Q
Sbjct: 114 MTQRNVVSYNTIIGGYSRNGSVEEAWNLFSEMRRYGFEPTQHTFAGLLSCASLKLSQGFQ 173
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
LQA ++K+GLF AD + GTALL L+GR+GC+DEVV FE+MP+K+LVTWN+++S+FG +G
Sbjct: 174 LQAQMVKSGLFHADPYAGTALLSLFGRNGCIDEVVCAFEEMPQKNLVTWNTVISLFGNYG 233
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F E+ MFLF EL+R+ L+E SF+GV+ G ++EQDLE GEQ+H L+IKNGFD E+ V N
Sbjct: 234 FSEESMFLFRELMRTGAGLSECSFMGVLSGFASEQDLELGEQVHDLLIKNGFDCEVSVLN 293
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL+NMY +C+ I AEKMF+ +RDVVSWNT+IGALA+SE K LEL+L+MS+D V P
Sbjct: 294 SLINMYVKCSCICLAEKMFELGCVRDVVSWNTMIGALAKSERPSKVLELFLKMSLDGVLP 353
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N+TTFV VINSC LQ + G+ IHAKVI+N +E +VFVGSALVDFYAKCDNLE AH CF
Sbjct: 354 NETTFVSVINSCTNLQILVFGEYIHAKVIRNKIESNVFVGSALVDFYAKCDNLESAHCCF 413
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
EI KN+V WNALILGY++K +S+ LL +LQLGY PNEF+FS L+SSL F+L QL
Sbjct: 414 DEIDEKNVVCWNALILGYSNKCF-SSVSLLKRMLQLGYCPNEFSFSAALKSSLVFELQQL 472
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
HCLI+RMGY+ EYV +L+TSYAK+G+ISDAL F A N P V P+N IAG+YN+ GQ
Sbjct: 473 HCLIMRMGYQQNEYVSSALITSYAKNGIISDALIFDAASNKPLLVGPSNAIAGVYNKIGQ 532
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
Y+ T L S LE PDIVSWNI+IAACA NGDYKEV ELFK+M+ A+IYPDNYT VSLLS
Sbjct: 533 YHRTQDLFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLLSV 592
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C+KLCNLALGSS+HG I KT+ DTFV N+LIDMYGKCG I SS+KIFN++ +RN+IT
Sbjct: 593 CTKLCNLALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNKIIERNIIT 652
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
WTALISALG+NG+A AL+ FREME LGFKPD VAL+AV +ACRHGGLV+EGMELF +M
Sbjct: 653 WTALISALGVNGYANEALKLFREMESLGFKPDGVALVAVFSACRHGGLVKEGMELFWQMK 712
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAK 658
+S G+EP +DHYHCVVDLL R GHL+EAE++I+ MPFPPNALIWR+FLEGC+R + A+
Sbjct: 713 KSCGIEPNIDHYHCVVDLLARCGHLQEAEQVISNMPFPPNALIWRSFLEGCKRWKTAE 770
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 206/413 (49%), Gaps = 43/413 (10%)
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ + N+L+++Y + +A K+F ++ R+VVS+NTIIG + + + +A L+ M
Sbjct: 88 IFLYNNLISLYVLQGELSTARKVFGEMTQRNVVSYNTIIGGYSRNGSVEEAWNLFSEMRR 147
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL-ECDVFVGSALVDFYAKCDNLE 294
P Q TF ++ SCA L+ S G + A+++K+ L D + G+AL+ + + ++
Sbjct: 148 YGFEPTQHTFAGLL-SCASLKLS-QGFQLQAQMVKSGLFHADPYAGTALLSLFGRNGCID 205
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
F E+ KN+V+WN +I + + S S+FL EL++ G +E +F VL
Sbjct: 206 EVVCAFEEMPQKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGLSECSFMGVLSGFA 265
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ Q L Q+H L+I+ G++ VL SL+ Y K I A
Sbjct: 266 SEQDLELGEQVHDLLIKNGFDCEVSVLNSLINMYVKCSCICLA----------------- 308
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
K+ D+VSWN +I A A + +VLELF M + P
Sbjct: 309 ---------------EKMFELGCVRDVVSWNTMIGALAKSERPSKVLELFLKMSLDGVLP 353
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ TFVS++++C+ L L G +H + + + I S+ FV + L+D Y KC ++ S+
Sbjct: 354 NETTFVSVINSCTNLQILVFGEYIHAKVIRNK-IESNVFVGSALVDFYAKCDNLESAHCC 412
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
F+E+ ++NV+ W ALI LG + ++ + M LG+ P+ + A L +
Sbjct: 413 FDEIDEKNVVCWNALI--LGYSNKCFSSVSLLKRMLQLGYCPNEFSFSAALKS 463
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/520 (23%), Positives = 240/520 (46%), Gaps = 27/520 (5%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
F+ L+ LY G L VF +M ++++V++N+I+ + ++G VE+ LF E+ R
Sbjct: 89 FLYNNLISLYVLQGELSTARKVFGEMTQRNVVSYNTIIGGYSRNGSVEEAWNLFSEMRRY 148
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELLVANSLVNMYFQCAGIWS 194
T+ +F G++ S L G Q+ ++K+G F + +L++++ + I
Sbjct: 149 GFEPTQHTFAGLLSCAS--LKLSQGFQLQAQMVKSGLFHADPYAGTALLSLFGRNGCIDE 206
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
F+++ +++V+WNT+I +++ L+ + ++ +F+ V++ A
Sbjct: 207 VVCAFEEMPQKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGLSECSFMGVLSGFAS 266
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
Q+ LG+ +H +IKN +C+V V ++L++ Y KC + A F +++VSWN +
Sbjct: 267 EQDLELGEQVHDLLIKNGFDCEVSVLNSLINMYVKCSCICLAEKMFELGCVRDVVSWNTM 326
Query: 315 ILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGY 369
I A P+ + L + L G PNE TF V+ S Q+L +H +IR
Sbjct: 327 IGALAKSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYIHAKVIRNKI 386
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
E+ +V +L+ YAK + A ++ V +I G N+ +V LL
Sbjct: 387 ESNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALILGYSNKCF---SSVSLLK 443
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
++ + +A + E+ +L + + Y +L+++ +K
Sbjct: 444 RMLQLGYCPNEFSFSAALKSSLVFELQQLHCLIMRMGYQQNEYVSSALITSYAK------ 497
Query: 490 GSSLHGLIKKTEIISSDT------FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
+G+I I + + N + +Y K G + +F+ + + ++++W
Sbjct: 498 ----NGIISDALIFDAASNKPLLVGPSNAIAGVYNKIGQYHRTQDLFSLLEEPDIVSWNI 553
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
LI+A NG + E F+ M+ PD ++++L+ C
Sbjct: 554 LIAACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLLSVC 593
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 119/243 (48%), Gaps = 9/243 (3%)
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
AL A N + + N + +Y G+ + K+ ++ + ++VS+N +I + NG
Sbjct: 75 ALTVTMASNSTQPIFLYNNLISLYVLQGELSTARKVFGEMTQRNVVSYNTIIGGYSRNGS 134
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+E LF MR P +TF LLS C+ L L+ G L + K+ + +D +
Sbjct: 135 VEEAWNLFSEMRRYGFEPTQHTFAGLLS-CASL-KLSQGFQLQAQMVKSGLFHADPYAGT 192
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
L+ ++G+ G I V F EM +N++TW +IS G GF++ ++ FRE+ G
Sbjct: 193 ALLSLFGRNGCIDEVVCAFEEMPQKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGL 252
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNR---SYGVEPEMDHYHCVVDLLVRYGHLKEA 628
+ + VL+ G + +EL E+++ G + E+ + ++++ V+ + A
Sbjct: 253 SECSFMGVLS----GFASEQDLELGEQVHDLLIKNGFDCEVSVLNSLINMYVKCSCICLA 308
Query: 629 EKI 631
EK+
Sbjct: 309 EKM 311
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 4/170 (2%)
Query: 480 ACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
AC K L LH L + + F+ N LI +Y G + ++ K+F EMT RNV
Sbjct: 60 ACKKAPTLKETKPLHALTVTMASNSTQPIFLYNNLISLYVLQGELSTARKVFGEMTQRNV 119
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
+++ +I NG + A F EM GF+P + +L+ + +G +L +
Sbjct: 120 VSYNTIIGGYSRNGSVEEAWNLFSEMRRYGFEPTQHTFAGLLSCASLK--LSQGFQLQAQ 177
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
M +S + ++ L R G + E MP N + W T +
Sbjct: 178 MVKSGLFHADPYAGTALLSLFGRNGCIDEVVCAFEEMP-QKNLVTWNTVI 226
>gi|224146493|ref|XP_002326026.1| predicted protein [Populus trichocarpa]
gi|222862901|gb|EEF00408.1| predicted protein [Populus trichocarpa]
Length = 737
Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/655 (64%), Positives = 521/655 (79%), Gaps = 1/655 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP RN VS+NSIIS +S+ GY+E+A R F MI+ GF P FT GLLSC S++ G
Sbjct: 74 MPHRNKVSYNSIISCFSKYGYLEEAWRTFCEMIDCGFRPNNFTLSGLLSCASMDVGRGIM 133
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
LQA +KNGLFC+D FVGTALLGL+GR G LDE VFEDMP KSLVTWNS++S+ G HG
Sbjct: 134 LQALAIKNGLFCSDVFVGTALLGLFGRCGWLDEAFHVFEDMPDKSLVTWNSMISLLGHHG 193
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
FVEDC+ LF +LVR E +L++ SF GV+ GL E+DLEFG QIHGLVIK+G D E+LV+N
Sbjct: 194 FVEDCVVLFRKLVRKEGSLSKCSFEGVLSGLVCEEDLEFGGQIHGLVIKSGLDCEVLVSN 253
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL+NMY + + + EK+F++V+ RDVV+WNTII A ++S+N GKALE++L+MS D + P
Sbjct: 254 SLINMYARRSSMSQVEKLFEEVDGRDVVTWNTIISAFSKSKNPGKALEVFLKMSEDGIMP 313
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
NQTTFV VINSC L + G+ +H K++K ALE DV++GSALVD+YAKC L+ AH CF
Sbjct: 314 NQTTFVSVINSCTSLLVPMCGEYVHGKIVKTALETDVYLGSALVDYYAKCGKLDNAHYCF 373
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
EI KN+VSWN+LILGYA+K S S+ LL+E+L+LG+RPNEF+FS VL+SSL +L Q+
Sbjct: 374 REIHQKNVVSWNSLILGYANKCSFASVSLLLEMLKLGFRPNEFSFSAVLKSSLVLELKQI 433
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H L IR+GYEN EYVL SL+TSY ++GLI+DAL FV A AVVPAN IAGIYNR+GQ
Sbjct: 434 HSLTIRLGYENNEYVLTSLITSYGRNGLITDALIFVKASETLLAVVPANSIAGIYNRSGQ 493
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
Y ET+K LSQLE PD VSWNIVIAACA NG+Y EV ELFK+MR A++ PDNYT+ SLL
Sbjct: 494 YFETLKFLSQLEEPDTVSWNIVIAACARNGNYNEVFELFKHMRVAQMLPDNYTYTSLLCV 553
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
SK+CNLALGSS+HGL+ KT D V N+LIDMYGKCG++ SS KIF+ MT+RN+IT
Sbjct: 554 SSKVCNLALGSSIHGLLIKTNFSYFDIVVRNVLIDMYGKCGNLESSAKIFDSMTERNLIT 613
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
WTALISALG+NG AQ ALE+F +MEFLG +PD+VA IAVLTACRHG LVREGM+LF +MN
Sbjct: 614 WTALISALGINGCAQEALERFNDMEFLGSRPDKVAFIAVLTACRHGALVREGMQLFGKMN 673
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
+Y +EP+MDHYHC+VDLL R GHL+EAEK+I+ MPFPP+A IWR+FLEGC++ R
Sbjct: 674 -NYHIEPDMDHYHCLVDLLARNGHLEEAEKVISCMPFPPDAQIWRSFLEGCKKRR 727
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 138/623 (22%), Positives = 285/623 (45%), Gaps = 68/623 (10%)
Query: 75 AFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR 134
FV ++ Y + VF++MP ++ V++NSI+S F K+G++E+ FCE++
Sbjct: 48 TFVYNNIISFYASFNQVPMAHKVFDNMPHRNKVSYNSIISCFSKYGYLEEAWRTFCEMID 107
Query: 135 SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELLVANSLVNMYFQCAGIW 193
+ G++ S D+ G + L IKNG F ++ V +L+ ++ +C +
Sbjct: 108 CGFRPNNFTLSGLLSCAS--MDVGRGIMLQALAIKNGLFCSDVFVGTALLGLFGRCGWLD 165
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
A +F+D+ + +V+WN++I L + L+ ++ ++ +F V++
Sbjct: 166 EAFHVFEDMPDKSLVTWNSMISLLGHHGFVEDCVVLFRKLVRKEGSLSKCSFEGVLSGLV 225
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
++ G IH VIK+ L+C+V V ++L++ YA+ ++ F E+ +++V+WN
Sbjct: 226 CEEDLEFGGQIHGLVIKSGLDCEVLVSNSLINMYARRSSMSQVEKLFEEVDGRDVVTWNT 285
Query: 314 LILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMG 368
+I ++ +P ++ + +++ + G PN+ TF V+ S + + +H I++
Sbjct: 286 IISAFSKSKNPGKALEVFLKMSEDGIMPNQTTFVSVINSCTSLLVPMCGEYVHGKIVKTA 345
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
E Y+ +L+ YAK G + +A ++ V ++I G N+ + LL
Sbjct: 346 LETDVYLGSALVDYYAKCGKLDNAHYCFREIHQKNVVSWNSLILGYANKC-SFASVSLLL 404
Query: 429 SQLE---RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI---YPDN-YTFVSLLSAC 481
L+ RP+ S++ V+ + VLEL K + + I Y +N Y SL+++
Sbjct: 405 EMLKLGFRPNEFSFSAVLKSSL-------VLEL-KQIHSLTIRLGYENNEYVLTSLITSY 456
Query: 482 SKLCNLALGSSLHGLIKKTEII--SSDTFV----CNMLIDMYGKCGSIGSSVKIFNEMTD 535
+ +GLI I +S+T + N + +Y + G ++K +++ +
Sbjct: 457 GR----------NGLITDALIFVKASETLLAVVPANSIAGIYNRSGQYFETLKFLSQLEE 506
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR----------- 584
+ ++W +I+A NG E F+ M PD ++L
Sbjct: 507 PDTVSWNIVIAACARNGNYNEVFELFKHMRVAQMLPDNYTYTSLLCVSSKVCNLALGSSI 566
Query: 585 HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
HG L++ F+ + R + ++D+ + G+L+ + KI +M N + W
Sbjct: 567 HGLLIKTNFSYFDIVVR-----------NVLIDMYGKCGNLESSAKIFDSMT-ERNLITW 614
Query: 645 RTFLE-----GCQRCRIAKYDTL 662
+ GC + + +++ +
Sbjct: 615 TALISALGINGCAQEALERFNDM 637
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 165/371 (44%), Gaps = 52/371 (14%)
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIK--NALECDVFVGSALVDFYAKCDNLEGAHLC 299
Q + ++ SC+ L+ K +HA I E FV + ++ FYA + + AH
Sbjct: 11 QYRLLQLLQSCSKLRALDTTKPLHALTITIGPNPEQSTFVYNNIISFYASFNQVPMAHKV 70
Query: 300 FSEISNKNIVSWNALI-----LGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
F + ++N VS+N++I GY ++ T E++ G+RPN FT S +L
Sbjct: 71 FDNMPHRNKVSYNSIISCFSKYGYLEEAWRT----FCEMIDCGFRPNNFTLSGLLS---- 122
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
C + +G G++ ALA L V ++ G+
Sbjct: 123 -------CASMDVG-----------------RGIMLQALAIKNGLFCSDVFVGTALL-GL 157
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+ R G +E + + +V+WN +I+ H+G ++ + LF+ + +F
Sbjct: 158 FGRCGWLDEAFHVFEDMPDKSLVTWNSMISLLGHHGFVEDCVVLFRKLVRKEGSLSKCSF 217
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+LS +L G +HGL+ K+ + + V N LI+MY + S+ K+F E+
Sbjct: 218 EGVLSGLVCEEDLEFGGQIHGLVIKSG-LDCEVLVSNSLINMYARRSSMSQVEKLFEEVD 276
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR---------- 584
R+V+TW +ISA + +ALE F +M G P++ ++V+ +C
Sbjct: 277 GRDVVTWNTIISAFSKSKNPGKALEVFLKMSEDGIMPNQTTFVSVINSCTSLLVPMCGEY 336
Query: 585 -HGGLVREGME 594
HG +V+ +E
Sbjct: 337 VHGKIVKTALE 347
>gi|255568319|ref|XP_002525134.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535593|gb|EEF37261.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 792
Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/663 (60%), Positives = 511/663 (77%), Gaps = 3/663 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP R++ S+NSII++Y + GY+E+AL +F M + GF P FT GLLSC ++ G Q
Sbjct: 74 MPQRSIASYNSIITSYCKYGYLEEALGVFSRMRDCGFRPNNFTLSGLLSCSKMDLSIGLQ 133
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
LQA +KNGLF DAFVGTALL ++GR G L+E + VFED+P KSLVTWNSI+ +FG+HG
Sbjct: 134 LQALAMKNGLFYIDAFVGTALLNVFGRWGWLNEALHVFEDLPIKSLVTWNSIICLFGQHG 193
Query: 121 FVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+VEDC+ FCEL R L+E SFVGV+ GL + LEFGEQIH LV K GFDY + V
Sbjct: 194 YVEDCIIYFCELHREIGCCLSECSFVGVLSGLVCGKYLEFGEQIHSLVTKTGFDYTVSVV 253
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
NS++++Y +CA + AEK F++ +D+V+WNT+I ALA+SE KALEL+ +M D +
Sbjct: 254 NSVISVYVKCATLHLAEKKFEEAACKDIVTWNTMIVALAKSEKPIKALELFFKMPRDAIR 313
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PNQ TF +I+SCA LQ + + IHAKVI +A + DV+VGSALVD+YAKCD L+ A C
Sbjct: 314 PNQITFASLISSCANLQIPMYAEFIHAKVIMHAFDTDVYVGSALVDYYAKCDKLDDARCC 373
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
F +I KN+VSWN+LILG A+K +I LL+E+LQ GY+PNEF+FS VL SS +L Q
Sbjct: 374 FVKIHEKNVVSWNSLILGCANKCPYAAISLLVEMLQCGYQPNEFSFSAVLISSSILELQQ 433
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
LHCLIIRMGY+N +YVL SL+TSY ++GLISDAL F+ A P A VP+N +AGIYN+ G
Sbjct: 434 LHCLIIRMGYDNNDYVLSSLITSYGRNGLISDALVFLAASETPLAAVPSNNVAGIYNKAG 493
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
Y +T++LLSQLE PD VSWNI IAACA NG+YKEV ELFK M A+I+PDNYT+VSLLS
Sbjct: 494 HYYKTLELLSQLEEPDNVSWNIAIAACARNGNYKEVFELFKQMLVAQIHPDNYTYVSLLS 553
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
+ S++C+LALGSS+HG + K S DTFVCN+L+DMYGKCG + SSVKIFN M DRN+I
Sbjct: 554 SSSQICDLALGSSIHGFLIKNNFSSCDTFVCNVLLDMYGKCGCLRSSVKIFNSMRDRNLI 613
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
TWTALISALG+N A ALE+F++ME G +PD+VA IAVLTACRHG LV EG+ELF++M
Sbjct: 614 TWTALISALGINSCAHEALERFKDMEHQGLRPDKVAFIAVLTACRHGALVGEGIELFKKM 673
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKY 659
+SYG+EPEMDHYHC+VDL R+GH+KEAEK+I++MP PPNALIWRTFLEGC++ R +K
Sbjct: 674 -KSYGLEPEMDHYHCLVDLFSRHGHVKEAEKVISSMPCPPNALIWRTFLEGCKKYR-SKE 731
Query: 660 DTL 662
D L
Sbjct: 732 DQL 734
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 128/535 (23%), Positives = 250/535 (46%), Gaps = 56/535 (10%)
Query: 75 AFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR 134
A++ ++ LY L VF++MP++S+ ++NSI++ + K+G++E+ + +F +
Sbjct: 48 AYLFNNIISLYTSFSELSLARKVFDNMPQRSIASYNSIITSYCKYGYLEEALGVFSRMRD 107
Query: 135 SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY-ELLVANSLVNMYFQCAGIW 193
+ G++ ++ DL G Q+ L +KNG Y + V +L+N++ + +
Sbjct: 108 CGFRPNNFTLSGLLS--CSKMDLSIGLQLQALAMKNGLFYIDAFVGTALLNVFGRWGWLN 165
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINSC 252
A +F+D+ I+ +V+WN+II + + + + +I ++ +FV V++
Sbjct: 166 EALHVFEDLPIKSLVTWNSIICLFGQHGYVEDCIIYFCELHREIGCCLSECSFVGVLSGL 225
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
+ G+ IH+ V K + V V ++++ Y KC L A F E + K+IV+WN
Sbjct: 226 VCGKYLEFGEQIHSLVTKTGFDYTVSVVNSVISVYVKCATLHLAEKKFEEAACKDIVTWN 285
Query: 313 ALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRM 367
+I+ A P ++ L ++ + RPN+ TF+ ++ S Q+ +H +I
Sbjct: 286 TMIVALAKSEKPIKALELFFKMPRDAIRPNQITFASLISSCANLQIPMYAEFIHAKVIMH 345
Query: 368 GYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
++ YV +L+ YAK + DA FV
Sbjct: 346 AFDTDVYVGSALVDYYAKCDKLDDARCCFV------------------------------ 375
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
++ ++VSWN +I CA+ Y + L + ++ P+ ++F ++L + S L
Sbjct: 376 ---KIHEKNVVSWNSLILGCANKCPYAAISLLVEMLQCG-YQPNEFSFSAVLISSSIL-- 429
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
LH LI + ++D +V + LI YG+ G I ++ +F ++ T A +
Sbjct: 430 --ELQQLHCLIIRMGYDNND-YVLSSLITSYGRNGLISDAL-VFLAASE----TPLAAVP 481
Query: 547 ALGLNGFAQRALEKFREMEFLGF--KPDRVALIAVLTACRHGGLVREGMELFERM 599
+ + G +A ++ +E L +PD V+ + AC G +E ELF++M
Sbjct: 482 SNNVAGIYNKAGHYYKTLELLSQLEEPDNVSWNIAIAACARNGNYKEVFELFKQM 536
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Query: 477 LLSACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
LL AC++ +LA LH L I + ++ N +I +Y + + K+F+ M
Sbjct: 17 LLHACTRARSLATTKPLHALTITLGPNPNQPAYLFNNIISLYTSFSELSLARKVFDNMPQ 76
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
R++ ++ ++I++ G+ + AL F M GF+P+ L +L+ + + ++
Sbjct: 77 RSIASYNSIITSYCKYGYLEEALGVFSRMRDCGFRPNNFTLSGLLSCSKMDLSIGLQLQA 136
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
N + ++ + ++++ R+G L EA + +P
Sbjct: 137 LAMKNGLFYIDAFVG--TALLNVFGRWGWLNEALHVFEDLP 175
>gi|356515100|ref|XP_003526239.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g58590-like [Glycine max]
Length = 732
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/659 (58%), Positives = 502/659 (76%), Gaps = 1/659 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
+P R VVS+N++I+AY R G V+DA + +M GF PTQ+T GLLSC+ LN G Q
Sbjct: 74 LPHRTVVSYNTLITAYCRRGNVDDAWNLLCHMRGSGFAPTQYTLTGLLSCELLNHSRGVQ 133
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
LQA ++NGL ADAFVGTALLGL+GR GC DE+ FEDMP+KSLVTWNS+VS+ ++G
Sbjct: 134 LQALSIRNGLLDADAFVGTALLGLFGRLGCWDELFLAFEDMPQKSLVTWNSMVSLLARNG 193
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGL-SNEQDLEFGEQIHGLVIKNGFDYELLVA 179
FVE+C LF +LV + ++L+E S V V+ GL +E+DLE+GEQIHGL++K GF E+ A
Sbjct: 194 FVEECKILFRDLVGTGISLSEGSVVAVLSGLVDSEEDLEYGEQIHGLMVKCGFGCEITAA 253
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
NSL+++Y +C +++ E++F+ V + +VVSWNT+I AL +SE AL+L+L M+ +
Sbjct: 254 NSLISVYVRCKAMFAVERLFEQVPVENVVSWNTVIDALVKSERPMMALDLFLNMARRGLM 313
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+Q TFV VI+SC L+NS+ G+S+HAK+I++ E DV VG+ALVDFY+KCD AH C
Sbjct: 314 PSQATFVAVIHSCTSLRNSVCGESVHAKIIRSGFESDVIVGTALVDFYSKCDKFISAHKC 373
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
F +I KN+VSWNALI GY++ S TSI LL ++LQLGY PNEF+FS VL+SS L Q
Sbjct: 374 FDQIEEKNVVSWNALITGYSNICSSTSILLLQKMLQLGYSPNEFSFSAVLKSSSMSNLHQ 433
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
LH LIIR GYE+ EYVL SL+ +Y ++GLI++AL+FV N P VVP+NIIAGIYNRT
Sbjct: 434 LHGLIIRSGYESNEYVLSSLVMAYTRNGLINEALSFVEEFNNPLPVVPSNIIAGIYNRTS 493
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
Y+ET+KLLS LE+PD VSWNIVI+ACA + Y EV LFK+M +A I+PD+YTF+S++S
Sbjct: 494 LYHETIKLLSLLEKPDAVSWNIVISACARSNSYDEVFALFKHMHSACIHPDSYTFMSIIS 553
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
C+KLC L LGSSLHGLI KT + + DTF+ N+LIDMYGKCGSI SSVK+F E+ +N+I
Sbjct: 554 VCTKLCLLNLGSSLHGLIIKTNLSNYDTFLGNVLIDMYGKCGSIDSSVKVFEEIMYKNII 613
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
TWTALI+ALGLNGFA A+ +F+ +E +G KPD +AL AVL++CR+GGLV EGME+F +M
Sbjct: 614 TWTALITALGLNGFAHEAVMRFQNLELMGLKPDALALRAVLSSCRYGGLVNEGMEIFRQM 673
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAK 658
YGV PE DHYHCVVDLL + G +KEAEKII MPFPPNA IWR+FLEG R IA
Sbjct: 674 GTRYGVPPEHDHYHCVVDLLAKNGQIKEAEKIIACMPFPPNANIWRSFLEGYSRQEIAN 732
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 129/539 (23%), Positives = 226/539 (41%), Gaps = 81/539 (15%)
Query: 155 QDLEFGEQIHGLVIKNGF--DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNT 212
+ L+ + +H L I G + + N++++ Y + +A K+F + R VVS+NT
Sbjct: 25 RSLDATKCLHALSITMGHIPKQSIFIHNNIISSYIALGEVLNARKLFDALPHRTVVSYNT 84
Query: 213 IIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
+I A N A L M P Q T ++ SC L +S G + A I+N
Sbjct: 85 LITAYCRRGNVDDAWNLLCHMRGSGFAPTQYTLTGLL-SCELLNHS-RGVQLQALSIRNG 142
Query: 273 -LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI 331
L+ D FVG+AL+ + + + L F ++ K++V+WN+++ A +L
Sbjct: 143 LLDADAFVGTALLGLFGRLGCWDELFLAFEDMPQKSLVTWNSMVSLLARNGFVEECKILF 202
Query: 332 -ELLQLGYRPNEFTFSHVLRSSLAFQL-----LQLHCLIIRMGYENYEYVLGSLMTSYAK 385
+L+ G +E + VL + + Q+H L+++ G+ G +T+
Sbjct: 203 RDLVGTGISLSEGSVVAVLSGLVDSEEDLEYGEQIHGLMVKCGF-------GCEITA--- 252
Query: 386 SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA 445
AN + +Y R +L Q+ ++VSWN VI A
Sbjct: 253 ----------------------ANSLISVYVRCKAMFAVERLFEQVPVENVVSWNTVIDA 290
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
+ L+LF M + P TFV+++ +C+ L N G S+H I ++ S
Sbjct: 291 LVKSERPMMALDLFLNMARRGLMPSQATFVAVIHSCTSLRNSVCGESVHAKIIRSG-FES 349
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
D V L+D Y KC S+ K F+++ ++NV++W ALI+ N + ++ ++M
Sbjct: 350 DVIVGTALVDFYSKCDKFISAHKCFDQIEEKNVVSWNALITGYS-NICSSTSILLLQKML 408
Query: 566 FLGFKPDRVALIAVLTACR-------HG------------------------GLVREGME 594
LG+ P+ + AVL + HG GL+ E +
Sbjct: 409 QLGYSPNEFSFSAVLKSSSMSNLHQLHGLIIRSGYESNEYVLSSLVMAYTRNGLINEALS 468
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
E N V P + + + R E K+++ + P+A+ W + C R
Sbjct: 469 FVEEFNNPLPVVPS----NIIAGIYNRTSLYHETIKLLSLLE-KPDAVSWNIVISACAR 522
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 125/587 (21%), Positives = 262/587 (44%), Gaps = 61/587 (10%)
Query: 35 RGFEPTQFTFGGLLSCDSLNPVEGAQ-LQASVLKNGLFCADA-FVGTALLGLYGRHGCLD 92
GF Q L +C +L ++ + L A + G + F+ ++ Y G +
Sbjct: 6 HGFRHGQLLLNLLEACCTLRSLDATKCLHALSITMGHIPKQSIFIHNNIISSYIALGEVL 65
Query: 93 EVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH-GL 151
+F+ +P +++V++N++++ + + G V+D L C + S A T+ + G++ L
Sbjct: 66 NARKLFDALPHRTVVSYNTLITAYCRRGNVDDAWNLLCHMRGSGFAPTQYTLTGLLSCEL 125
Query: 152 SNEQDLEFGEQIHGLVIKNG-FDYELLVANSLVNMYFQCAGIWSAEKM-FKDVEIRDVVS 209
N G Q+ L I+NG D + V +L+ ++ + G W + F+D+ + +V+
Sbjct: 126 LNHSR---GVQLQALSIRNGLLDADAFVGTALLGLFGR-LGCWDELFLAFEDMPQKSLVT 181
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI-LGKSIHAKV 268
WN+++ LA + + L+ + + ++ + V V++ + + G+ IH +
Sbjct: 182 WNSMVSLLARNGFVEECKILFRDLVGTGISLSEGSVVAVLSGLVDSEEDLEYGEQIHGLM 241
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSI 327
+K C++ ++L+ Y +C + F ++ +N+VSWN +I P ++
Sbjct: 242 VKCGFGCEITAANSLISVYVRCKAMFAVERLFEQVPVENVVSWNTVIDALVKSERPMMAL 301
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSY 383
L + + + G P++ TF V+ S + + +H IIR G+E+ + ++G+ + +
Sbjct: 302 DLFLNMARRGLMPSQATFVAVIHSCTSLRNSVCGESVHAKIIRSGFES-DVIVGTALVDF 360
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
Y++ ++ K Q+E ++VSWN +I
Sbjct: 361 -------------------------------YSKCDKFISAHKCFDQIEEKNVVSWNALI 389
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
++ +L L K ++ P+ ++F ++L + S + NL LHGLI ++
Sbjct: 390 TGYSNICSSTSILLLQKMLQLG-YSPNEFSFSAVLKS-SSMSNL---HQLHGLIIRSG-Y 443
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFRE 563
S+ +V + L+ Y + G I ++ E + + + +I+ G R
Sbjct: 444 ESNEYVLSSLVMAYTRNGLINEALSFVEEFNNPLPVVPSNIIA-----GIYNRTSLYHET 498
Query: 564 MEFLGF--KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
++ L KPD V+ V++AC E LF+ M+ S + P+
Sbjct: 499 IKLLSLLEKPDAVSWNIVISACARSNSYDEVFALFKHMH-SACIHPD 544
>gi|147853495|emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera]
Length = 954
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/600 (63%), Positives = 466/600 (77%), Gaps = 1/600 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M RNVVS+N+II YSR G VE+A +F + GFEPTQ TF GLLSC SL +G Q
Sbjct: 114 MTQRNVVSYNTIIGGYSRNGSVEEAWNLFSELRRYGFEPTQHTFAGLLSCASLKLSQGFQ 173
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
LQA ++K+GLF AD + GTALL L+ R+GC+DEVV FE+MP K+LVTWN+++S+FG +G
Sbjct: 174 LQAQMVKSGLFHADPYAGTALLSLFRRNGCIDEVVCAFEEMPLKNLVTWNTVISLFGNYG 233
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F E+ MFLF EL+R+ L+E SF+GV+ G ++EQDLE GEQ+H L+IKNGFD E+ V N
Sbjct: 234 FSEESMFLFRELMRTGAGLSECSFMGVLSGFASEQDLELGEQVHDLLIKNGFDXEVSVLN 293
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL+NMY +C+ I AEKMF+ +RDVVSWNT+IGALA+SE K LEL+L+MS+D V P
Sbjct: 294 SLINMYVKCSCIXLAEKMFELGCVRDVVSWNTMIGALAKSERPSKVLELFLKMSLDGVLP 353
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N+TTFV VINSC LQ + G+ IHAKVI+N +E +VFVGSALVDFYAKCDNLE AH CF
Sbjct: 354 NETTFVSVINSCTNLQILVFGEYIHAKVIRNKIESNVFVGSALVDFYAKCDNLESAHCCF 413
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
EI KN+V WNALILGY++K +S+ LL +LQLGY PNE +FS L+SSL F+L QL
Sbjct: 414 DEIDEKNVVCWNALILGYSNKCF-SSVSLLKRMLQLGYXPNEXSFSAALKSSLVFELQQL 472
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
HCLI+RMGY+ EYV +L+TSYAK+G+ISDAL F A N P V P+N IAG+YN+ GQ
Sbjct: 473 HCLIMRMGYQQNEYVSSALITSYAKNGIISDALIFDAASNKPLLVGPSNAIAGVYNKIGQ 532
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
Y+ T L S LE PDIVSWNI+IAACA NGDYKEV ELFK+M+ A+IYPDNYT VSLLS
Sbjct: 533 YHXTQDLFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLLSV 592
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C+KLCNLALGSS+HG I KT+ DTFV N+LIDMYGKCG I SS+KIFN++ RN+IT
Sbjct: 593 CTKLCNLALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNKIIXRNIIT 652
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
WTALISALG+NG+A AL+ FREME LGFKPD VAL+AV +ACRHGGL+ L E N
Sbjct: 653 WTALISALGVNGYANEALKLFREMESLGFKPDGVALVAVFSACRHGGLIFLAGRLPEHTN 712
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 206/413 (49%), Gaps = 43/413 (10%)
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ + N+L+++Y + +A ++F ++ R+VVS+NTIIG + + + +A L+ +
Sbjct: 88 IFLYNNLISLYVLQGELSTAREVFGEMTQRNVVSYNTIIGGYSRNGSVEEAWNLFSELRR 147
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL-ECDVFVGSALVDFYAKCDNLE 294
P Q TF ++ SCA L+ S G + A+++K+ L D + G+AL+ + + ++
Sbjct: 148 YGFEPTQHTFAGLL-SCASLKLS-QGFQLQAQMVKSGLFHADPYAGTALLSLFRRNGCID 205
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
F E+ KN+V+WN +I + + S S+FL EL++ G +E +F VL
Sbjct: 206 EVVCAFEEMPLKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGLSECSFMGVLSGFA 265
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ Q L Q+H L+I+ G++ VL SL+ Y K I A
Sbjct: 266 SEQDLELGEQVHDLLIKNGFDXEVSVLNSLINMYVKCSCIXLA----------------- 308
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
K+ D+VSWN +I A A + +VLELF M + P
Sbjct: 309 ---------------EKMFELGCVRDVVSWNTMIGALAKSERPSKVLELFLKMSLDGVLP 353
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ TFVS++++C+ L L G +H + + + I S+ FV + L+D Y KC ++ S+
Sbjct: 354 NETTFVSVINSCTNLQILVFGEYIHAKVIRNK-IESNVFVGSALVDFYAKCDNLESAHCC 412
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
F+E+ ++NV+ W ALI LG + ++ + M LG+ P+ + A L +
Sbjct: 413 FDEIDEKNVVCWNALI--LGYSNKCFSSVSLLKRMLQLGYXPNEXSFSAALKS 463
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 122/521 (23%), Positives = 242/521 (46%), Gaps = 29/521 (5%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
F+ L+ LY G L VF +M ++++V++N+I+ + ++G VE+ LF EL R
Sbjct: 89 FLYNNLISLYVLQGELSTAREVFGEMTQRNVVSYNTIIGGYSRNGSVEEAWNLFSELRRY 148
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELLVANSLVNMYFQCAGIWS 194
T+ +F G++ S L G Q+ ++K+G F + +L++++ + I
Sbjct: 149 GFEPTQHTFAGLLSCAS--LKLSQGFQLQAQMVKSGLFHADPYAGTALLSLFRRNGCIDE 206
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
F+++ ++++V+WNT+I +++ L+ + ++ +F+ V++ A
Sbjct: 207 VVCAFEEMPLKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGLSECSFMGVLSGFAS 266
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
Q+ LG+ +H +IKN + +V V ++L++ Y KC + A F +++VSWN +
Sbjct: 267 EQDLELGEQVHDLLIKNGFDXEVSVLNSLINMYVKCSCIXLAEKMFELGCVRDVVSWNTM 326
Query: 315 ILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGY 369
I A P+ + L + L G PNE TF V+ S Q+L +H +IR
Sbjct: 327 IGALAKSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYIHAKVIRNKI 386
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
E+ +V +L+ YAK + A ++ V +I G N+ +K +
Sbjct: 387 ESNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALILGYSNKCFSSVSLLKRML 446
Query: 430 QLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
QL P+ S+ +A + E+ +L + + Y +L+++ +K
Sbjct: 447 QLGYXPNEXSF----SAALKSSLVFELQQLHCLIMRMGYQQNEYVSSALITSYAK----- 497
Query: 489 LGSSLHGLIKKTEIISSDTF------VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
+G+I I + + N + +Y K G + +F+ + + ++++W
Sbjct: 498 -----NGIISDALIFDAASNKPLLVGPSNAIAGVYNKIGQYHXTQDLFSLLEEPDIVSWN 552
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
LI+A NG + E F+ M+ PD ++++L+ C
Sbjct: 553 ILIAACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLLSVC 593
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 118/243 (48%), Gaps = 9/243 (3%)
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
AL A N + + N + +Y G+ + ++ ++ + ++VS+N +I + NG
Sbjct: 75 ALTVTMASNSTQPIFLYNNLISLYVLQGELSTAREVFGEMTQRNVVSYNTIIGGYSRNGS 134
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+E LF +R P +TF LLS C+ L L+ G L + K+ + +D +
Sbjct: 135 VEEAWNLFSELRRYGFEPTQHTFAGLLS-CASL-KLSQGFQLQAQMVKSGLFHADPYAGT 192
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
L+ ++ + G I V F EM +N++TW +IS G GF++ ++ FRE+ G
Sbjct: 193 ALLSLFRRNGCIDEVVCAFEEMPLKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGL 252
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNR---SYGVEPEMDHYHCVVDLLVRYGHLKEA 628
+ + VL+ G + +EL E+++ G + E+ + ++++ V+ + A
Sbjct: 253 SECSFMGVLS----GFASEQDLELGEQVHDLLIKNGFDXEVSVLNSLINMYVKCSCIXLA 308
Query: 629 EKI 631
EK+
Sbjct: 309 EKM 311
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 4/170 (2%)
Query: 480 ACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
AC L LH L + + F+ N LI +Y G + ++ ++F EMT RNV
Sbjct: 60 ACKTAPTLKETKPLHALTVTMASNSTQPIFLYNNLISLYVLQGELSTAREVFGEMTQRNV 119
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
+++ +I NG + A F E+ GF+P + +L+ + +G +L +
Sbjct: 120 VSYNTIIGGYSRNGSVEEAWNLFSELRRYGFEPTQHTFAGLLSCASLK--LSQGFQLQAQ 177
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
M +S + ++ L R G + E MP N + W T +
Sbjct: 178 MVKSGLFHADPYAGTALLSLFRRNGCIDEVVCAFEEMPL-KNLVTWNTVI 226
>gi|297817172|ref|XP_002876469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322307|gb|EFH52728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/663 (54%), Positives = 476/663 (71%), Gaps = 1/663 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+RN VSFN+II+ YS+ G E A + M G+ P Q T GLLSC SL+ G Q
Sbjct: 75 MPERNKVSFNTIINGYSKYGDAEKAWGVLSEMRYFGYLPNQSTVSGLLSCASLDIRAGTQ 134
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L LK GLF ADA+VGT LL YGR L+ VFEDMP KSL TWN ++S+ G HG
Sbjct: 135 LHGLSLKYGLFMADAYVGTCLLCFYGRLELLEMAEQVFEDMPFKSLETWNHMMSLLGHHG 194
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F+++CMFLF ELV LTESS +GV+ G+S E DLE +Q+H K G D E+ V N
Sbjct: 195 FLKECMFLFRELVGMGACLTESSLLGVLKGVSCENDLEISKQLHCSATKQGLDCEISVVN 254
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL++ Y +C AE+MF++ D+VSWN IIGA A+SEN K L+L++ M P
Sbjct: 255 SLISAYGKCGNTHMAERMFQEAGSWDIVSWNAIIGATAKSENPLKTLKLFVSMPEHGFSP 314
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
NQ T++ V+ + + Q G+ IH +IKN + D+F+G+AL+DFYAKC +LE +HLCF
Sbjct: 315 NQGTYISVLGASSLRQLLSFGRQIHGMLIKNGCKTDIFLGNALIDFYAKCGSLEDSHLCF 374
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
I +KNIV WNAL+ GY++K P + L +++LQ+G+RP E+TFS L+S +L QL
Sbjct: 375 DYIRDKNIVCWNALLSGYSNKDGPICLSLFLQMLQMGFRPTEYTFSTTLKSCCVTELQQL 434
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H +I+RMGYE+ +YVL SLM SYAK+ L+SDAL + + P +VVP NI+AGIY+R GQ
Sbjct: 435 HSVIVRMGYEDNDYVLSSLMRSYAKNQLMSDALFLLDWASGPTSVVPLNIVAGIYSRRGQ 494
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
Y+E+VKL+S LE+PD VSWNI IAAC+ + ++ EV++LFK+M + I PDNYTFVS+LS
Sbjct: 495 YHESVKLISTLEQPDTVSWNIAIAACSRSDNHGEVIDLFKHMLQSNIRPDNYTFVSILSL 554
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
CSKLC+L LGSS+HGLI KT+ DTFVCN+LIDMYGKCGSI S +K+F E ++N+IT
Sbjct: 555 CSKLCDLTLGSSIHGLITKTDFSCVDTFVCNVLIDMYGKCGSIRSVIKVFEETREKNLIT 614
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
WTALIS+LG+ G+ ALEKF+E LGFKPDRV+ I++LTACRHGG+V+EGM+LF++M
Sbjct: 615 WTALISSLGIYGYGHEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMDLFQKM- 673
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYD 660
+ YG+EPEMDHY C VDLL R G+LKEAE +I MPFP +A +WRTFL+GC R + +
Sbjct: 674 KDYGIEPEMDHYRCAVDLLARNGYLKEAEHLIHRMPFPADAPVWRTFLDGCNRFAEEQRN 733
Query: 661 TLN 663
TLN
Sbjct: 734 TLN 736
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/518 (22%), Positives = 243/518 (46%), Gaps = 22/518 (4%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
++ ++ LY + G + VF+ MP ++ V++N+I++ + K+G E + E+
Sbjct: 50 YISNNIICLYEKLGEVSLAGKVFDQMPERNKVSFNTIINGYSKYGDAEKAWGVLSEMRYF 109
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELLVANSLVNMYFQCAGIWS 194
+S+ G++ S D+ G Q+HGL +K G F + V L+ Y + +
Sbjct: 110 GYLPNQSTVSGLLSCAS--LDIRAGTQLHGLSLKYGLFMADAYVGTCLLCFYGRLELLEM 167
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
AE++F+D+ + + +WN ++ L + + L+ + +++ + V+ +
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHHGFLKECMFLFRELVGMGACLTESSLLGVLKGVSC 227
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
+ + K +H K L+C++ V ++L+ Y KC N A F E + +IVSWNA+
Sbjct: 228 ENDLEISKQLHCSATKQGLDCEISVVNSLISAYGKCGNTHMAERMFQEAGSWDIVSWNAI 287
Query: 315 ILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGY 369
I A +P ++ L + + + G+ PN+ T+ VL +S QLL Q+H ++I+ G
Sbjct: 288 IGATAKSENPLKTLKLFVSMPEHGFSPNQGTYISVLGASSLRQLLSFGRQIHGMLIKNGC 347
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET--VKL 427
+ ++ +L+ YAK G + D+ + V +++G N+ G + +++
Sbjct: 348 KTDIFLGNALIDFYAKCGSLEDSHLCFDYIRDKNIVCWNALLSGYSNKDGPICLSLFLQM 407
Query: 428 LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNL 487
L RP +++ + +C E+ +L + ++Y SL+ + +K N
Sbjct: 408 LQMGFRPTEYTFSTTLKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK--NQ 461
Query: 488 ALGSSLHGLIKKTEIISSDTFVC--NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
+ +L L + S T V N++ +Y + G SVK+ + + + ++W I
Sbjct: 462 LMSDALFLL----DWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAI 517
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+A + ++ F+ M +PD +++L+ C
Sbjct: 518 AACSRSDNHGEVIDLFKHMLQSNIRPDNYTFVSILSLC 555
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 173/411 (42%), Gaps = 39/411 (9%)
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIK--NALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
V ++N C + K++HA I + + V++ + ++ Y K + A F +
Sbjct: 15 LVSLLNVCRKAPSFARTKALHALSITLCSVILQPVYISNNIICLYEKLGEVSLAGKVFDQ 74
Query: 303 ISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLR-SSLAFQL-LQ 359
+ +N VS+N +I GY+ + +L E+ GY PN+ T S +L +SL + Q
Sbjct: 75 MPERNKVSFNTIINGYSKYGDAEKAWGVLSEMRYFGYLPNQSTVSGLLSCASLDIRAGTQ 134
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
LH L ++ G + +G+ + + Y R
Sbjct: 135 LHGLSLKYGLFMADAYVGTCLLCF-------------------------------YGRLE 163
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
++ + + +WN +++ H+G KE + LF+ + + + +L
Sbjct: 164 LLEMAEQVFEDMPFKSLETWNHMMSLLGHHGFLKECMFLFRELVGMGACLTESSLLGVLK 223
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
S +L + LH K + + + V N LI YGKCG+ + ++F E +++
Sbjct: 224 GVSCENDLEISKQLHCSATK-QGLDCEISVVNSLISAYGKCGNTHMAERMFQEAGSWDIV 282
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W A+I A + + L+ F M GF P++ I+VL A L+ G ++ +
Sbjct: 283 SWNAIIGATAKSENPLKTLKLFVSMPEHGFSPNQGTYISVLGASSLRQLLSFGRQIHGML 342
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++ G + ++ + ++D + G L+++ + N + W L G
Sbjct: 343 IKN-GCKTDIFLGNALIDFYAKCGSLEDSHLCFDYIR-DKNIVCWNALLSG 391
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 9/171 (5%)
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
N VSLL+ C K + A +LH L I +I ++ N +I +Y K G + + K+
Sbjct: 12 NGRLVSLLNVCRKAPSFARTKALHALSITLCSVILQPVYISNNIICLYEKLGEVSLAGKV 71
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F++M +RN +++ +I+ G A++A EM + G+ P++ + +L+ +
Sbjct: 72 FDQMPERNKVSFNTIINGYSKYGDAEKAWGVLSEMRYFGYLPNQSTVSGLLSCASLD--I 129
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH---LKEAEKIITTMPF 637
R G +L ++ YG+ M + LL YG L+ AE++ MPF
Sbjct: 130 RAGTQL-HGLSLKYGL--FMADAYVGTCLLCFYGRLELLEMAEQVFEDMPF 177
>gi|6735376|emb|CAB68197.1| putative protein [Arabidopsis thaliana]
Length = 810
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/663 (55%), Positives = 476/663 (71%), Gaps = 1/663 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+RN VSFN+II YS+ G V+ A +F M G+ P Q T GLLSC SL+ G Q
Sbjct: 144 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQ 203
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L LK GLF ADAFVGT LL LYGR L+ VFEDMP KSL TWN ++S+ G G
Sbjct: 204 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRG 263
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F+++CMF F ELVR +LTESSF+GV+ G+S +DL+ +Q+H K G D E+ V N
Sbjct: 264 FLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVN 323
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL++ Y +C AE+MF+D D+VSWN II A A+SEN KAL+L++ M P
Sbjct: 324 SLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSP 383
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
NQ T+V V+ + +Q G+ IH +IKN E + +G+AL+DFYAKC NLE + LCF
Sbjct: 384 NQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCF 443
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
I +KNIV WNAL+ GYA+K P + L +++LQ+G+RP E+TFS L+S +L QL
Sbjct: 444 DYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQL 503
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H +I+RMGYE+ +YVL SLM SYAK+ L++DAL + + P +VVP NI+AGIY+R GQ
Sbjct: 504 HSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQ 563
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
Y+E+VKL+S LE+PD VSWNI IAAC+ + ++EV+ELFK+M + I PD YTFVS+LS
Sbjct: 564 YHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSL 623
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
CSKLC+L LGSS+HGLI KT+ +DTFVCN+LIDMYGKCGSI S +K+F E ++N+IT
Sbjct: 624 CSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLIT 683
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
WTALIS LG++G+ Q ALEKF+E LGFKPDRV+ I++LTACRHGG+V+EGM LF++M
Sbjct: 684 WTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM- 742
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYD 660
+ YGVEPEMDHY C VDLL R G+LKEAE +I MPFP +A +WRTFL+GC R + +
Sbjct: 743 KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAEEQRN 802
Query: 661 TLN 663
TLN
Sbjct: 803 TLN 805
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/517 (23%), Positives = 248/517 (47%), Gaps = 20/517 (3%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
+V ++ LY + G + VF+ MP ++ V++N+I+ + K+G V+ +F E+
Sbjct: 119 YVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF 178
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELLVANSLVNMYFQCAGIWS 194
+S+ G++ S D+ G Q+HGL +K G F + V L+ +Y + +
Sbjct: 179 GYLPNQSTVSGLLSCAS--LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEM 236
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINSCA 253
AE++F+D+ + + +WN ++ L F K + R V + +++F+ V+ +
Sbjct: 237 AEQVFEDMPFKSLETWNHMMSLLGH-RGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 295
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+++ + K +H K L+C++ V ++L+ Y KC N A F + + +IVSWNA
Sbjct: 296 CVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNA 355
Query: 314 LILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMG 368
+I A +P ++ L + + + G+ PN+ T+ VL S QLL Q+H ++I+ G
Sbjct: 356 IICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 415
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET--VK 426
E + +L+ YAK G + D+ + V +++G N+ G + ++
Sbjct: 416 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQ 475
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+L RP +++ + +C E+ +L + ++Y SL+ + +K N
Sbjct: 476 MLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK--N 529
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
+ +L L+ + N++ +Y + G SVK+ + + + ++W I+
Sbjct: 530 QLMNDAL--LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIA 587
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
A + + + +E F+ M +PD+ +++L+ C
Sbjct: 588 ACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLC 624
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 172/410 (41%), Gaps = 39/410 (9%)
Query: 246 VYVINSCAGLQNSILGKSIHAKVIK--NALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
V ++N C + K++HA I + L V+V + ++ Y K + A F ++
Sbjct: 85 VSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQM 144
Query: 304 SNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLR-SSLAFQL-LQL 360
+N VS+N +I GY+ + + E+ GY PN+ T S +L +SL + QL
Sbjct: 145 PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQL 204
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H L ++ G ++DA + +Y R
Sbjct: 205 HGLSLKYGL------------------FMADAFV-------------GTCLLCLYGRLDL 233
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
++ + + +WN +++ H G KE + F+ + +F+ +L
Sbjct: 234 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 293
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
S + +L + LH K + + V N LI YGKCG+ + ++F + ++++
Sbjct: 294 VSCVKDLDISKQLHCSATKKG-LDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVS 352
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W A+I A + +AL+ F M GF P++ ++VL L+ G ++ +
Sbjct: 353 WNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLI 412
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++ G E + + ++D + G+L+++ ++ N + W L G
Sbjct: 413 KN-GCETGIVLGNALIDFYAKCGNLEDS-RLCFDYIRDKNIVCWNALLSG 460
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 28/220 (12%)
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+NETVK+L LE D+VS+ + ++ GD + N VSLL+
Sbjct: 52 FNETVKILKPLE--DMVSFCMSLSC----GD---------------LANHNDRVVSLLNV 90
Query: 481 CSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
C K + A +LH L I ++ +VCN +I +Y K G + + K+F++M +RN +
Sbjct: 91 CRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKV 150
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
++ +I G +A F EM + G+ P++ + +L+ VR G +L +
Sbjct: 151 SFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD--VRAGTQL-HGL 207
Query: 600 NRSYGVEPEMDHY--HCVVDLLVRYGHLKEAEKIITTMPF 637
+ YG+ D + C++ L R L+ AE++ MPF
Sbjct: 208 SLKYGLFMA-DAFVGTCLLCLYGRLDLLEMAEQVFEDMPF 246
>gi|30694836|ref|NP_191418.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525906|sp|Q0WN01.2|PP286_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g58590
gi|332646281|gb|AEE79802.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/663 (55%), Positives = 476/663 (71%), Gaps = 1/663 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+RN VSFN+II YS+ G V+ A +F M G+ P Q T GLLSC SL+ G Q
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQ 134
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L LK GLF ADAFVGT LL LYGR L+ VFEDMP KSL TWN ++S+ G G
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRG 194
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F+++CMF F ELVR +LTESSF+GV+ G+S +DL+ +Q+H K G D E+ V N
Sbjct: 195 FLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVN 254
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL++ Y +C AE+MF+D D+VSWN II A A+SEN KAL+L++ M P
Sbjct: 255 SLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSP 314
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
NQ T+V V+ + +Q G+ IH +IKN E + +G+AL+DFYAKC NLE + LCF
Sbjct: 315 NQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCF 374
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
I +KNIV WNAL+ GYA+K P + L +++LQ+G+RP E+TFS L+S +L QL
Sbjct: 375 DYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQL 434
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H +I+RMGYE+ +YVL SLM SYAK+ L++DAL + + P +VVP NI+AGIY+R GQ
Sbjct: 435 HSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQ 494
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
Y+E+VKL+S LE+PD VSWNI IAAC+ + ++EV+ELFK+M + I PD YTFVS+LS
Sbjct: 495 YHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSL 554
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
CSKLC+L LGSS+HGLI KT+ +DTFVCN+LIDMYGKCGSI S +K+F E ++N+IT
Sbjct: 555 CSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLIT 614
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
WTALIS LG++G+ Q ALEKF+E LGFKPDRV+ I++LTACRHGG+V+EGM LF++M
Sbjct: 615 WTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM- 673
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYD 660
+ YGVEPEMDHY C VDLL R G+LKEAE +I MPFP +A +WRTFL+GC R + +
Sbjct: 674 KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAEEQRN 733
Query: 661 TLN 663
TLN
Sbjct: 734 TLN 736
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/517 (23%), Positives = 248/517 (47%), Gaps = 20/517 (3%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
+V ++ LY + G + VF+ MP ++ V++N+I+ + K+G V+ +F E+
Sbjct: 50 YVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF 109
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELLVANSLVNMYFQCAGIWS 194
+S+ G++ S D+ G Q+HGL +K G F + V L+ +Y + +
Sbjct: 110 GYLPNQSTVSGLLSCAS--LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEM 167
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINSCA 253
AE++F+D+ + + +WN ++ L F K + R V + +++F+ V+ +
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGH-RGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+++ + K +H K L+C++ V ++L+ Y KC N A F + + +IVSWNA
Sbjct: 227 CVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNA 286
Query: 314 LILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMG 368
+I A +P ++ L + + + G+ PN+ T+ VL S QLL Q+H ++I+ G
Sbjct: 287 IICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 346
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET--VK 426
E + +L+ YAK G + D+ + V +++G N+ G + ++
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQ 406
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+L RP +++ + +C E+ +L + ++Y SL+ + +K N
Sbjct: 407 MLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK--N 460
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
+ +L L+ + N++ +Y + G SVK+ + + + ++W I+
Sbjct: 461 QLMNDAL--LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIA 518
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
A + + + +E F+ M +PD+ +++L+ C
Sbjct: 519 ACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLC 555
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 171/408 (41%), Gaps = 35/408 (8%)
Query: 246 VYVINSCAGLQNSILGKSIHAKVIK--NALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
V ++N C + K++HA I + L V+V + ++ Y K + A F ++
Sbjct: 16 VSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQM 75
Query: 304 SNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHC 362
+N VS+N +I GY+ + + E+ GY PN+ T S LL
Sbjct: 76 PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVS---------GLLSCAS 126
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
L +R G + + L K GL A AFV + +Y R
Sbjct: 127 LDVRAGTQLHGLSL--------KYGLFM-ADAFV-----------GTCLLCLYGRLDLLE 166
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
++ + + +WN +++ H G KE + F+ + +F+ +L S
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
+ +L + LH K + + V N LI YGKCG+ + ++F + ++++W
Sbjct: 227 CVKDLDISKQLHCSATKKG-LDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWN 285
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
A+I A + +AL+ F M GF P++ ++VL L+ G ++ + ++
Sbjct: 286 AIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN 345
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G E + + ++D + G+L+++ ++ N + W L G
Sbjct: 346 -GCETGIVLGNALIDFYAKCGNLEDS-RLCFDYIRDKNIVCWNALLSG 391
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
N VSLL+ C K + A +LH L I ++ +VCN +I +Y K G + + K+
Sbjct: 12 NDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKV 71
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F++M +RN +++ +I G +A F EM + G+ P++ + +L+ V
Sbjct: 72 FDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD--V 129
Query: 590 REGMELFERMNRSYGV-EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
R G +L ++ YG+ + C++ L R L+ AE++ MPF
Sbjct: 130 RAGTQL-HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPF 177
>gi|110739166|dbj|BAF01499.1| hypothetical protein [Arabidopsis thaliana]
Length = 741
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/663 (55%), Positives = 475/663 (71%), Gaps = 1/663 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+RN VSFN+II YS+ G V+ A +F M G+ P Q T GLLSC SL+ G Q
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQ 134
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L LK GLF ADAFVGT LL LYGR L+ VFEDMP KSL TWN ++S+ G G
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRG 194
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F+++CMF F ELVR +LTESSF+GV+ G+S +DL+ +Q+H K G D E+ V N
Sbjct: 195 FLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVN 254
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL++ Y +C AE+MF+D D+VSWN II A A+SEN KAL+L++ M P
Sbjct: 255 SLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSP 314
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
NQ T+V V+ + +Q G+ IH +IKN E + +G+AL+DFYAKC NLE + LCF
Sbjct: 315 NQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCF 374
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
I +KNIV WNAL+ GYA+K P + L +++LQ+G+RP E+TFS L+S +L QL
Sbjct: 375 DYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQL 434
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H +I+RMGYE+ +YVL SLM SYAK+ L++DAL + + P +VVP NI+AGIY+R GQ
Sbjct: 435 HSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQ 494
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
Y+E+VKL+S LE+PD VSWNI IAAC+ + ++EV+ELFK+M + I PD YTFVS+LS
Sbjct: 495 YHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSL 554
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
CSKLC+L LGSS+HGLI KT+ +DTFVCN+LIDMYGKCGSI S +K+F E ++N+IT
Sbjct: 555 CSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLIT 614
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
WTALIS LG++G+ Q ALEKF+E LGFKPDRV+ I++LTACRHGG+V+EGM LF++M
Sbjct: 615 WTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM- 673
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYD 660
+ YGVEP MDHY C VDLL R G+LKEAE +I MPFP +A +WRTFL+GC R + +
Sbjct: 674 KDYGVEPGMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAEEQRN 733
Query: 661 TLN 663
TLN
Sbjct: 734 TLN 736
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/517 (23%), Positives = 248/517 (47%), Gaps = 20/517 (3%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
+V ++ LY + G + VF+ MP ++ V++N+I+ + K+G V+ +F E+
Sbjct: 50 YVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF 109
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELLVANSLVNMYFQCAGIWS 194
+S+ G++ S D+ G Q+HGL +K G F + V L+ +Y + +
Sbjct: 110 GYLPNQSTVSGLLSCAS--LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEM 167
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINSCA 253
AE++F+D+ + + +WN ++ L F K + R V + +++F+ V+ +
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGH-RGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+++ + K +H K L+C++ V ++L+ Y KC N A F + + +IVSWNA
Sbjct: 227 CVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNA 286
Query: 314 LILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMG 368
+I A +P ++ L + + + G+ PN+ T+ VL S QLL Q+H ++I+ G
Sbjct: 287 IICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 346
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET--VK 426
E + +L+ YAK G + D+ + V +++G N+ G + ++
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQ 406
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+L RP +++ + +C E+ +L + ++Y SL+ + +K N
Sbjct: 407 MLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK--N 460
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
+ +L L+ + N++ +Y + G SVK+ + + + ++W I+
Sbjct: 461 QLMNDAL--LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIA 518
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
A + + + +E F+ M +PD+ +++L+ C
Sbjct: 519 ACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLC 555
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 172/408 (42%), Gaps = 35/408 (8%)
Query: 246 VYVINSCAGLQNSILGKSIHAKVIK--NALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
V ++N C + K++HA I + L V+V + ++ Y K + A F ++
Sbjct: 16 VSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQM 75
Query: 304 SNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHC 362
+N VS+N +I GY+ + + E+ GY PN+ T S LL
Sbjct: 76 PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVS---------GLLSCAS 126
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
L +R G + + L K GL A AFV + +Y R
Sbjct: 127 LDVRAGTQLHGLSL--------KYGLFM-ADAFV-----------GTCLLCLYGRLDLLE 166
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
++ + + +WN +++ H G KE + F+ + +F+ +L S
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
+ +L + LH K + + + V N LI YGKCG+ + ++F + ++++W
Sbjct: 227 CVKDLDISKQLHCSATK-KGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWN 285
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
A+I A + +AL+ F M GF P++ ++VL L+ G ++ + ++
Sbjct: 286 AIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN 345
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G E + + ++D + G+L+++ ++ N + W L G
Sbjct: 346 -GCETGIVLGNALIDFYAKCGNLEDS-RLCFDYIRDKNIVCWNALLSG 391
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
N VSLL+ C K + A +LH L I ++ +VCN +I +Y K G + + K+
Sbjct: 12 NDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKV 71
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F++M +RN +++ +I G +A F EM + G+ P++ + +L+ V
Sbjct: 72 FDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD--V 129
Query: 590 REGMELFERMNRSYGV-EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
R G +L ++ YG+ + C++ L R L+ AE++ MPF
Sbjct: 130 RAGTQL-HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPF 177
>gi|357130989|ref|XP_003567126.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g58590-like [Brachypodium distachyon]
Length = 680
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 297/656 (45%), Positives = 403/656 (61%), Gaps = 10/656 (1%)
Query: 1 MPDRNVV----SFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV 56
MP R+ FNS+I++ R G DA + M+ G PT FTF +LS S+
Sbjct: 1 MPSRDPPLSPSFFNSLIASRVRAGRGADAFSLLARMLAAGVAPTAFTFAPILSSPSVGTR 60
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
AQL +LK+GL +D + GTALLG + R G E + VF +MP ++ VTWN ++S+F
Sbjct: 61 RAAQLHPHILKSGLLHSDPYSGTALLGFFARDGRFGEALRVFGEMPARNAVTWNCLISLF 120
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G+V+D +F F LV S L+E S V V+ + EQ+HG +K D
Sbjct: 121 VQYGYVKDAVFWFRGLVSSGDGLSEGSIVAVLPAFGSP------EQVHGFAMKIAMDSFS 174
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VANSL+N Y C + +AEK+F + DVVSWNT+I A A S G+ EL+L M
Sbjct: 175 AVANSLLNSYCTCCAVCAAEKLFNWLMFTDVVSWNTMITAFARSNLPGRTFELFLMMQGQ 234
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P++TTF V+N+C + GK +HAK IK+ L VFV ++LVDFY KC + A
Sbjct: 235 GVLPDETTFSSVLNACTNINGHEHGKYVHAKSIKHNLNTRVFVNTSLVDFYTKCVGSKDA 294
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
EIS+K+ WNALI G + PT +L ++L+ G PNEFTFS +L+
Sbjct: 295 RKVLEEISDKSASCWNALISGRSDGDVPTLFVILRDMLRSGISPNEFTFSSLLKDPSLLD 354
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L Q+H L+ R+GY + +YV ++++SY G ISDALA+ L+ V N++AG YN
Sbjct: 355 LWQIHSLVARLGYGSNDYVSSAIISSYVSHGFISDALAYGATLDPESCTVSMNVLAGAYN 414
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
R Y ET +LL + D +S +I I ACA NGDY E E F+ MR + DNY VS
Sbjct: 415 RAHMYQETKELLLHQQSSDNISCSIFITACARNGDYSEAFEYFRQMRILGHHFDNYVTVS 474
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LLS C K+ +L LG +HGLI KT SDT+V NML+DMY KCG I V+ F EM +R
Sbjct: 475 LLSICIKVNSLILGRLVHGLIIKTSSGCSDTYVHNMLLDMYAKCGRIEDCVRAFEEMENR 534
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
N+I+WT +IS L LNGF+++AL F+ ME G KPD+VA++AVL+ACRHGGLV+EGM++F
Sbjct: 535 NIISWTTVISGLALNGFSRKALAWFKAMEEAGLKPDKVAILAVLSACRHGGLVQEGMKIF 594
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ M Y E EM+HY CVVD+L + GHLK+A +I MPF P+ +IWRTFL+GC
Sbjct: 595 KCMEADYSTEAEMEHYICVVDMLCKCGHLKQAGSVIRGMPFRPSTIIWRTFLQGCN 650
>gi|297720419|ref|NP_001172571.1| Os01g0754701 [Oryza sativa Japonica Group]
gi|57900338|dbj|BAD87291.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125527747|gb|EAY75861.1| hypothetical protein OsI_03779 [Oryza sativa Indica Group]
gi|255673696|dbj|BAH91301.1| Os01g0754701 [Oryza sativa Japonica Group]
Length = 663
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 295/644 (45%), Positives = 399/644 (61%), Gaps = 6/644 (0%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKN 68
FNS+I++ +R G + + M+ G PT FTF +LS S AQL +LK+
Sbjct: 15 FNSLIASRARAGRAAEGFALLARMLAAGVAPTAFTFAPILSSPSAGARCAAQLHPHILKS 74
Query: 69 GLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFL 128
GL +D + GT+L+G +GR+G D+ + +F +MP +S+VTWN ++S F +HG D +
Sbjct: 75 GLLHSDPYSGTSLVGFFGRNGRFDDALRLFGEMPVRSVVTWNCLISSFAQHGRACDAVIW 134
Query: 129 FCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
F LVRS ++++ S V V+ EQ+HGLV K D VANSL+N Y
Sbjct: 135 FRALVRSGNSVSDGSLVAVLPAFGTP------EQVHGLVKKIAIDSFSTVANSLLNSYCT 188
Query: 189 CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYV 248
+ AE +F + RDVVSWNT+I A A +ALE + M V PN+ TF V
Sbjct: 189 HSSTSLAENLFSEFMFRDVVSWNTMIIAFARRSLPQRALEFFWMMEGWSVLPNEITFSSV 248
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
I +C + GKSIHAKVIK+ L FV ++L DFY+KC + AH E +
Sbjct: 249 IYACTSINGHEHGKSIHAKVIKHNLNTRPFVNTSLFDFYSKCGCTKDAHKVLEEAPEDST 308
Query: 309 VSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMG 368
WN LI ++ PTS F+L E+L+ G PNE + S +L+ F LLQ+H L+ R+G
Sbjct: 309 TRWNGLISCHSDTDVPTSFFILREMLRSGVMPNEVSLSSLLKDPSVFDLLQIHSLVTRLG 368
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
Y+ Y+YV ++++SYA ++SDALA+ L+ V N++AG+YNR Y+E KLL
Sbjct: 369 YDGYDYVSSAIISSYASHEMVSDALAYGGMLDPDSCAVSMNVLAGVYNRVRMYDEAKKLL 428
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
D VSW+I+I ACA NGDY E L+ F+ MR + D+Y VSLLS C+K +L
Sbjct: 429 LHQGCNDTVSWSILITACARNGDYAEALKFFELMRILGHHFDSYVSVSLLSICTKSNSLV 488
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
LG LHGLI KT DT+V NML+DMY KCG I +K F EM DRN+I+WTA+IS L
Sbjct: 489 LGRLLHGLIIKTNSGCLDTYVHNMLLDMYAKCGRIEECLKAFKEMEDRNIISWTAIISGL 548
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
LNGF+++AL F+ ME GFKPD+VA+ AVL+ACRHGGLV EGM +F M Y +EPE
Sbjct: 549 ALNGFSRKALAWFKAMEEDGFKPDKVAITAVLSACRHGGLVHEGMNIFRHMKSEYSIEPE 608
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M+HY CVVD+L + GHLKEAE +I MPF P+A++WRTFL+GCQ
Sbjct: 609 MEHYICVVDMLCKCGHLKEAEVVIRGMPFQPSAVVWRTFLQGCQ 652
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 206/455 (45%), Gaps = 54/455 (11%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
R+VVS+N++I A++R + AL F M P + TF ++ +C S+N E G +
Sbjct: 205 RDVVSWNTMIIAFARRSLPQRALEFFWMMEGWSVLPNEITFSSVIYACTSINGHEHGKSI 264
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A V+K+ L FV T+L Y + GC + V E+ P S WN ++S
Sbjct: 265 HAKVIKHNL-NTRPFVNTSLFDFYSKCGCTKDAHKVLEEAPEDSTTRWNGLISCHSDTD- 322
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK---NGFDY---- 174
V F+ E++RS V E S ++ S L QIH LV + +G+DY
Sbjct: 323 VPTSFFILREMLRSGVMPNEVSLSSLLKDPSVFDLL----QIHSLVTRLGYDGYDYVSSA 378
Query: 175 -------ELLVANSL------------VNMYFQCAGIWSAEKMFKDVE-------IRDVV 208
+V+++L V+M AG+++ +M+ + + D V
Sbjct: 379 IISSYASHEMVSDALAYGGMLDPDSCAVSMNV-LAGVYNRVRMYDEAKKLLLHQGCNDTV 437
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SW+ +I A A + ++ +AL+ + M + + V +++ C + +LG+ +H +
Sbjct: 438 SWSILITACARNGDYAEALKFFELMRILGHHFDSYVSVSLLSICTKSNSLVLGRLLHGLI 497
Query: 269 IKNALEC-DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTS 326
IK C D +V + L+D YAKC +E F E+ ++NI+SW A+I G A S +
Sbjct: 498 IKTNSGCLDTYVHNMLLDMYAKCGRIEECLKAFKEMEDRNIISWTAIISGLALNGFSRKA 557
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSY--- 383
+ + + G++P++ + VL + L+ I R + EY + M Y
Sbjct: 558 LAWFKAMEEDGFKPDKVAITAVLSACRHGGLVHEGMNIFR--HMKSEYSIEPEMEHYICV 615
Query: 384 ----AKSGLISDALAFVTALNI-PRAVVPANIIAG 413
K G + +A + + P AVV + G
Sbjct: 616 VDMLCKCGHLKEAEVVIRGMPFQPSAVVWRTFLQG 650
>gi|125572064|gb|EAZ13579.1| hypothetical protein OsJ_03496 [Oryza sativa Japonica Group]
Length = 626
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 289/621 (46%), Positives = 387/621 (62%), Gaps = 6/621 (0%)
Query: 32 MINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCL 91
M+ G PT FTF +LS S AQL +LK+GL +D + GT+L+G +GR+G
Sbjct: 1 MLAAGVAPTAFTFAPILSSPSAGARCAAQLHPHILKSGLLHSDPYSGTSLVGFFGRNGRF 60
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
D+ + +F +MP +S+VTWN ++S F +HG D + F LVRS ++++ S V V+
Sbjct: 61 DDALRLFGEMPVRSVVTWNCLISSFAQHGRACDAVIWFRALVRSGNSVSDGSLVAVLPAF 120
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
EQ+HGLV K D VANSL+N Y + AE +F + RDVVSWN
Sbjct: 121 GTP------EQVHGLVKKIAIDSFSTVANSLLNSYCTHSSTSLAENLFSEFMFRDVVSWN 174
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
T+I A A +ALE + M V PN+ TF VI +C + GKSIHAKVIK+
Sbjct: 175 TMIIAFARRSLPQRALEFFWMMEGWSVLPNEITFSSVIYACTSINGHEHGKSIHAKVIKH 234
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI 331
L FV ++L DFY+KC + AH E + WN LI ++ PTS F+L
Sbjct: 235 NLNTRPFVNTSLFDFYSKCGCTKDAHKVLEEAPEDSTTRWNGLISCHSDTDVPTSFFILR 294
Query: 332 ELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
E+L+ G PNE + S +L+ F LLQ+H L+ R+GY+ Y+YV ++++SYA ++SD
Sbjct: 295 EMLRSGVMPNEVSLSSLLKDPSVFDLLQIHSLVTRLGYDGYDYVSSAIISSYASHEMVSD 354
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
ALA+ L+ V N++AG+YNR Y+E KLL D VSW+I+I ACA NGD
Sbjct: 355 ALAYGGMLDPDSCAVSMNVLAGVYNRVRMYDEAKKLLLHQGCNDTVSWSILITACARNGD 414
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
Y E L+ F+ MR + D+Y VSLLS C+K +L LG LHGLI KT DT+V N
Sbjct: 415 YAEALKFFELMRILGHHFDSYVSVSLLSICTKSNSLVLGRLLHGLIIKTNSGCLDTYVHN 474
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
ML+DMY KCG I +K F EM DRN+I+WTA+IS L LNGF+++AL F+ ME GFKP
Sbjct: 475 MLLDMYAKCGRIEECLKAFKEMEDRNIISWTAIISGLALNGFSRKALAWFKAMEEDGFKP 534
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D+VA+ AVL+ACRHGGLV EGM +F M Y +EPEM+HY CVVD+L + GHLKEAE +
Sbjct: 535 DKVAITAVLSACRHGGLVHEGMNIFRHMKSEYSIEPEMEHYICVVDMLCKCGHLKEAEVV 594
Query: 632 ITTMPFPPNALIWRTFLEGCQ 652
I MPF P+A++WRTFL+GCQ
Sbjct: 595 IRGMPFQPSAVVWRTFLQGCQ 615
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 206/455 (45%), Gaps = 54/455 (11%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
R+VVS+N++I A++R + AL F M P + TF ++ +C S+N E G +
Sbjct: 168 RDVVSWNTMIIAFARRSLPQRALEFFWMMEGWSVLPNEITFSSVIYACTSINGHEHGKSI 227
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A V+K+ L FV T+L Y + GC + V E+ P S WN ++S
Sbjct: 228 HAKVIKHNL-NTRPFVNTSLFDFYSKCGCTKDAHKVLEEAPEDSTTRWNGLISCHSDTD- 285
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK---NGFDY---- 174
V F+ E++RS V E S ++ S L QIH LV + +G+DY
Sbjct: 286 VPTSFFILREMLRSGVMPNEVSLSSLLKDPSVFDLL----QIHSLVTRLGYDGYDYVSSA 341
Query: 175 -------ELLVANSL------------VNMYFQCAGIWSAEKMFKDVE-------IRDVV 208
+V+++L V+M AG+++ +M+ + + D V
Sbjct: 342 IISSYASHEMVSDALAYGGMLDPDSCAVSMNV-LAGVYNRVRMYDEAKKLLLHQGCNDTV 400
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SW+ +I A A + ++ +AL+ + M + + V +++ C + +LG+ +H +
Sbjct: 401 SWSILITACARNGDYAEALKFFELMRILGHHFDSYVSVSLLSICTKSNSLVLGRLLHGLI 460
Query: 269 IKNALEC-DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTS 326
IK C D +V + L+D YAKC +E F E+ ++NI+SW A+I G A S +
Sbjct: 461 IKTNSGCLDTYVHNMLLDMYAKCGRIEECLKAFKEMEDRNIISWTAIISGLALNGFSRKA 520
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSY--- 383
+ + + G++P++ + VL + L+ I R + EY + M Y
Sbjct: 521 LAWFKAMEEDGFKPDKVAITAVLSACRHGGLVHEGMNIFR--HMKSEYSIEPEMEHYICV 578
Query: 384 ----AKSGLISDALAFVTALNI-PRAVVPANIIAG 413
K G + +A + + P AVV + G
Sbjct: 579 VDMLCKCGHLKEAEVVIRGMPFQPSAVVWRTFLQG 613
>gi|414880466|tpg|DAA57597.1| TPA: hypothetical protein ZEAMMB73_848759 [Zea mays]
Length = 664
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 273/644 (42%), Positives = 390/644 (60%), Gaps = 8/644 (1%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKN 68
FNS+I++ SR G V DAL + M+ G PT FTF +L+ S AQL +LK
Sbjct: 13 FNSLIASRSRTGRVVDALSLLTRMLAAGVAPTAFTFSPILASPSATACCAAQLHPHILKR 72
Query: 69 GLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFL 128
GL + + GT+L+G +GR G DE + VF +M +S+VTWN ++ F + G +
Sbjct: 73 GLLHCEPYSGTSLVGFFGRSGRFDEALKVFGEMTVRSVVTWNCLIYSFVQFGHSRAAVSW 132
Query: 129 FCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
F ELVRS L++ SFV ++ EQ+HG++ K G VAN+L+N Y
Sbjct: 133 FRELVRSGDGLSDGSFVAIL------PSFGLPEQVHGVMNKIGMGSLSAVANALLNSYCT 186
Query: 189 CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYV 248
C I AEK+F ++ RDVV WNT+I A S +A EL+L M +FPN+ TF V
Sbjct: 187 CGAIDVAEKLFNEIMFRDVVCWNTMITGFARSHVPERAFELFLSMQRQGIFPNEITFASV 246
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+ +C + G+ +HAK+IK+ L V V ++LV FYA C + AH + +
Sbjct: 247 LYACTVIDGHKHGRFVHAKIIKHNLSTSVSVNTSLVGFYANCSRGD-AHKVLEGVHGNST 305
Query: 309 VSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMG 368
WNALI G++ PT + ++ +LQ G +PNE T S + SL L Q+H L+IR+G
Sbjct: 306 TCWNALISGHSDCDDPTYLVIVRHMLQSGIKPNEVTLSSLKDPSL-LDLQQVHSLVIRLG 364
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
+ +YV ++++SYA G+I DAL++ AL+ V N++AG+ N+ Y ET LL
Sbjct: 365 HGGNDYVSSAIISSYASHGIIFDALSYGAALDPDSCSVSMNVLAGVCNKAHMYQETKDLL 424
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
D +SW+I+I ACA NGD+ E F+ MR D+Y VSLL C+K +L
Sbjct: 425 LHKRDRDTISWSILITACARNGDFIEAFGFFRQMRIFGHRFDSYVCVSLLGICTKNNSLY 484
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
LG +HGL KT SD++V NML+DMY KCG I +++F EM DRN+I+WT +IS L
Sbjct: 485 LGKLIHGLFIKTNSSCSDSYVDNMLLDMYAKCGRIEDCLRVFEEMEDRNLISWTTVISGL 544
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
GLNGF+++AL F+ ME G KPD+VA++AVL++CRHG LV+EGM++F+ + Y +E +
Sbjct: 545 GLNGFSRKALALFKAMEKDGCKPDKVAILAVLSSCRHGRLVQEGMKIFKNLKADYSIEAD 604
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M+HY CVVD+L + G+LKEAE +I MPF P+ I RTFL+GC+
Sbjct: 605 MEHYICVVDMLCKCGYLKEAEVVIRGMPFQPSTAICRTFLQGCK 648
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 176/394 (44%), Gaps = 48/394 (12%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
R+VV +N++I+ ++R E A +FL M +G P + TF +L +C ++ + G +
Sbjct: 203 RDVVCWNTMITGFARSHVPERAFELFLSMQRQGIFPNEITFASVLYACTVIDGHKHGRFV 262
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A ++K+ L V T+L+G Y + + V E + S WN+++S H
Sbjct: 263 HAKIIKHNL-STSVSVNTSLVGFYA-NCSRGDAHKVLEGVHGNSTTCWNALIS---GHSD 317
Query: 122 VEDCMFLFC--ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK---NGFDY-- 174
+D +L +++S + E + + L + L+ +Q+H LVI+ G DY
Sbjct: 318 CDDPTYLVIVRHMLQSGIKPNEVT----LSSLKDPSLLDL-QQVHSLVIRLGHGGNDYVS 372
Query: 175 --------------------ELLVANSLVNMYFQCAGIWSAEKMFKDVE-------IRDV 207
L +S AG+ + M+++ + RD
Sbjct: 373 SAIISSYASHGIIFDALSYGAALDPDSCSVSMNVLAGVCNKAHMYQETKDLLLHKRDRDT 432
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
+SW+ +I A A + +F +A + +M + + V ++ C + LGK IH
Sbjct: 433 ISWSILITACARNGDFIEAFGFFRQMRIFGHRFDSYVCVSLLGICTKNNSLYLGKLIHGL 492
Query: 268 VIKNALEC-DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPT 325
IK C D +V + L+D YAKC +E F E+ ++N++SW +I G S
Sbjct: 493 FIKTNSSCSDSYVDNMLLDMYAKCGRIEDCLRVFEEMEDRNLISWTTVISGLGLNGFSRK 552
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
++ L + + G +P++ VL S +L+Q
Sbjct: 553 ALALFKAMEKDGCKPDKVAILAVLSSCRHGRLVQ 586
>gi|242058723|ref|XP_002458507.1| hypothetical protein SORBIDRAFT_03g034905 [Sorghum bicolor]
gi|241930482|gb|EES03627.1| hypothetical protein SORBIDRAFT_03g034905 [Sorghum bicolor]
Length = 563
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/564 (40%), Positives = 336/564 (59%), Gaps = 15/564 (2%)
Query: 101 MPRKS----LVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
MPR S +NS+++ + G V D + L ++ + VA T +F ++ S
Sbjct: 1 MPRPSPPLSASLFNSLIASRARAGRVVDALSLLARMLAAGVAPTAFTFAPIL--ASTSAT 58
Query: 157 LEFGEQIHGLVIKNGFDY-ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
Q+H ++K+G + E SLV + + A K+F ++ +R +V+WN +I
Sbjct: 59 ACCAAQLHSHILKSGLLHCEPYSGTSLVGFFGRRGRFDDALKVFGEMTVRSIVTWNCLIS 118
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI-------LGKSIHAKV 268
+ A+ + A+ + + +FV V+ S GL + LG+ +HAKV
Sbjct: 119 SFAQFGHSRNAVSCFRELVRSGDGLLDGSFVAVLPS-FGLPEQVHVIDGHELGRFVHAKV 177
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
IK L VFV ++LV FYA C + + AH + + WNALI G++ PT +
Sbjct: 178 IKRNLGTSVFVNTSLVGFYANCISRKDAHKVLEGVPGNSTTCWNALISGHSDCDDPTCLV 237
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
++ ++L+ G +PNE TFS L+ S F L Q+H L+IR+G+ +YV ++++SYA G+
Sbjct: 238 IVRDMLRSGIKPNEVTFSSSLKDSTLFDLQQVHSLVIRLGHGGNDYVSSAIISSYASHGI 297
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
I DAL++ AL+ V N++AG+ N+ Y ET LL D +SW+I+I ACA
Sbjct: 298 IVDALSYGVALDPDSCSVSMNVLAGVCNKARMYQETKDLLVHKRDQDTISWSILITACAR 357
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
NGD+ E FK MR DNY VSLLS C+K +L LG +HGLI KT SD++
Sbjct: 358 NGDFVEAFGFFKQMRIFGHRFDNYVSVSLLSICTKNNSLYLGKLIHGLIVKTNSNCSDSY 417
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V NML+DMY KCG I +++F EM DRN+I+WT +IS LGLNGF+++AL F+ ME G
Sbjct: 418 VDNMLLDMYAKCGRIEDCLRVFEEMEDRNLISWTTVISGLGLNGFSRKALALFKAMEKDG 477
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
KPD+VA++AVL++CRHG LV+EGME+F+ M Y +E +M+HY CVVD+L + G+LKEA
Sbjct: 478 CKPDKVAILAVLSSCRHGRLVQEGMEIFKNMKADYSIEADMEHYICVVDMLCKCGYLKEA 537
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
E +I MPF P+ +IWRTFL+GC+
Sbjct: 538 EVVIRGMPFQPSTVIWRTFLQGCK 561
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 146/563 (25%), Positives = 245/563 (43%), Gaps = 79/563 (14%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQL 61
P + FNS+I++ +R G V DAL + M+ G PT FTF +L+ S AQL
Sbjct: 6 PPLSASLFNSLIASRARAGRVVDALSLLARMLAAGVAPTAFTFAPILASTSATACCAAQL 65
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ +LK+GL + + GT+L+G +GR G D+ + VF +M +S+VTWN ++S F + G
Sbjct: 66 HSHILKSGLLHCEPYSGTSLVGFFGRRGRFDDALKVFGEMTVRSIVTWNCLISSFAQFGH 125
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIH--GLSNEQDL----EFGEQIHGLVIKNGFDYE 175
+ + F ELVRS L + SFV V+ GL + + E G +H VIK
Sbjct: 126 SRNAVSCFRELVRSGDGLLDGSFVAVLPSFGLPEQVHVIDGHELGRFVHAKVIKRNLGTS 185
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V SLV Y C A K+ + V WN +I ++ ++ L + M
Sbjct: 186 VFVNTSLVGFYANCISRKDAHKVLEGVPGNSTTCWNALISGHSDCDD-PTCLVIVRDMLR 244
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILG--KSIHAKVIK----------------------- 270
+ PN+ TF + L++S L + +H+ VI+
Sbjct: 245 SGIKPNEVTF------SSSLKDSTLFDLQQVHSLVIRLGHGGNDYVSSAIISSYASHGII 298
Query: 271 -NAL---------ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
+AL C V + + L K + +++ +SW+ LI A
Sbjct: 299 VDALSYGVALDPDSCSVSM-NVLAGVCNKARMYQETKDLLVHKRDQDTISWSILITACAR 357
Query: 321 KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM 380
F + +++ F H + ++ LL + C +N LG L+
Sbjct: 358 NGDFVEAFGFFKQMRI--------FGHRFDNYVSVSLLSI-CT------KNNSLYLGKLI 402
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
GLI T N + V N++ +Y + G+ + +++ ++E +++SW
Sbjct: 403 -----HGLIVK-----TNSNCSDSYVD-NMLLDMYAKCGRIEDCLRVFEEMEDRNLISWT 451
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
VI+ NG ++ L LFK M PD +++LS+C + G + +K
Sbjct: 452 TVISGLGLNGFSRKALALFKAMEKDGCKPDKVAILAVLSSCRHGRLVQEGMEIFKNMKAD 511
Query: 501 EIISSDT--FVCNMLIDMYGKCG 521
I +D ++C ++DM KCG
Sbjct: 512 YSIEADMEHYIC--VVDMLCKCG 532
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 105/220 (47%), Gaps = 12/220 (5%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
D++ +S++ +I+A +R G +A F M G + LLS C N + G
Sbjct: 342 DQDTISWSILITACARNGDFVEAFGFFKQMRIFGHRFDNYVSVSLLSICTKNNSLYLGKL 401
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ ++K C+D++V LL +Y + G +++ + VFE+M ++L++W +++S G +G
Sbjct: 402 IHGLIVKTNSNCSDSYVDNMLLDMYAKCGRIEDCLRVFEEMEDRNLISWTTVISGLGLNG 461
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVI----HGLSNEQDLE-FGEQIHGLVIKNGFDYE 175
F + LF + + + + + V+ HG ++ +E F I+ ++
Sbjct: 462 FSRKALALFKAMEKDGCKPDKVAILAVLSSCRHGRLVQEGMEIFKNMKADYSIEADMEHY 521
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTII 214
+ V V+M +C + AE + + + + V W T +
Sbjct: 522 ICV----VDMLCKCGYLKEAEVVIRGMPFQPSTVIWRTFL 557
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/660 (31%), Positives = 363/660 (55%), Gaps = 42/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+V+S+NS+IS Y++ G+ + A ++F M N GF P + T+ +L+ C S +E G
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ + ++K G + D V +LL +YG+ G L VF + + +V++N+++ ++ +
Sbjct: 148 KKIHSQIIKAG-YQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQ 206
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+V++C+ LF ++ ++ + +++ ++ + L+ G++IH L ++ G + ++ V
Sbjct: 207 KAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRV 266
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LV M +C + SA++ FK + RDVV +N +I ALA+ + +A E Y RM D V
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV 326
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N+TT++ ++N+C+ + GK IH+ + ++ DV +G+AL+ YA+C +L A
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARE 386
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVL----RSSL 353
F + ++++SWNA+I GYA + L + +Q G +P TF H+L SS
Sbjct: 387 LFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSA 446
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+H I+R G ++ ++ +LM Y + G + +A N+ G
Sbjct: 447 YADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEA---------------QNVFEG 491
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
R D++SWN +IA A +G Y+ +LF+ M+ + PDN T
Sbjct: 492 TQAR-----------------DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNIT 534
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F S+LS C L LG +HG I ++ + D + N LI+MY +CGS+ + +F+ +
Sbjct: 535 FASVLSGCKNPEALELGKQIHGRITESG-LQLDVNLGNALINMYIRCGSLQDARNVFHSL 593
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK-PDRVALIAVLTACRHGGLVREG 592
R+V++WTA+I G +A+E F +M+ GF+ PD ++L+AC H GLV EG
Sbjct: 594 QHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEG 653
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++F M YGV P ++HY C+V LL R +EAE +I MPFPP+A +W T L C+
Sbjct: 654 YQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACR 713
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/597 (25%), Positives = 304/597 (50%), Gaps = 35/597 (5%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
E ++ A +++ G+ D F+ L+ +Y + + + VF++MPR+ +++WNS++S +
Sbjct: 45 EAKRIHAQMVEAGV-GPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCY 103
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ GF + LF E+ + + +++ ++ + +LE G++IH +IK G+ +
Sbjct: 104 AQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDP 163
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V NSL++MY +C + A ++F + RDVVS+NT++G A+ + L L+ +MS +
Sbjct: 164 RVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSE 223
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ P++ T++ ++++ GK IH ++ L D+ VG+ALV +C +++ A
Sbjct: 224 GISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSA 283
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF 355
F I+++++V +NALI A F + G N T+ +L +
Sbjct: 284 KQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTS 343
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSY-AKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+ L+ G L+ S+ ++ G SD V N + +
Sbjct: 344 KALEA----------------GKLIHSHISEDGHSSD-------------VQIGNALISM 374
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y R G + +L + + D++SWN +IA A D E + L+K M++ + P TF
Sbjct: 375 YARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTF 434
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+ LLSAC+ A G +H I ++ I S+ + N L++MY +CGS+ + +F
Sbjct: 435 LHLLSACANSSAYADGKMIHEDILRSGI-KSNGHLANALMNMYRRCGSLMEAQNVFEGTQ 493
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
R+VI+W ++I+ +G + A + F+EM+ +PD + +VL+ C++ + G +
Sbjct: 494 ARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQ 553
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ R+ S G++ +++ + ++++ +R G L++A + ++ + + W + GC
Sbjct: 554 IHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQH-RDVMSWTAMIGGC 608
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/517 (25%), Positives = 257/517 (49%), Gaps = 46/517 (8%)
Query: 142 SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKD 201
+++V ++ + ++ L ++IH +++ G ++ ++N L+NMY +C + A ++FK+
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC---AGLQNS 258
+ RDV+SWN++I A+ KA +L+ M PN+ T++ ++ +C A L+N
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELEN- 146
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
GK IH+++IK + D V ++L+ Y KC +L A F+ IS +++VS+N ++ Y
Sbjct: 147 --GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLY 204
Query: 319 ASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYE 373
A K+ + L ++ G P++ T+ ++L + +L ++H L + G +
Sbjct: 205 AQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDI 264
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
V +L+T + G + A GI +R
Sbjct: 265 RVGTALVTMCVRCGDVDSA---------------KQAFKGIADR---------------- 293
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
D+V +N +IAA A +G E E + MR+ + + T++S+L+ACS L G +
Sbjct: 294 -DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLI 352
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H I + + SSD + N LI MY +CG + + ++F M R++I+W A+I+
Sbjct: 353 HSHISE-DGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARRED 411
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
A+ +++M+ G KP RV + +L+AC + +G + E + RS G++ +
Sbjct: 412 RGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLAN 470
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++++ R G L EA+ + + + W + + G
Sbjct: 471 ALMNMYRRCGSLMEAQNVFEGTQ-ARDVISWNSMIAG 506
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/457 (24%), Positives = 230/457 (50%), Gaps = 39/457 (8%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQL 61
DR+VV +N++I+A ++ G+ +A + M + G + T+ +L +C + +E +L
Sbjct: 292 DRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKL 351
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
S + +D +G AL+ +Y R G L + +F MP++ L++WN+I++ + +
Sbjct: 352 IHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARRED 411
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ M L+ ++ V +F+ ++ +N G+ IH ++++G +AN+
Sbjct: 412 RGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANA 471
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+NMY +C + A+ +F+ + RDV+SWN++I A+ ++ A +L+ M + + P+
Sbjct: 472 LMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPD 531
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TF V++ C + LGK IH ++ ++ L+ DV +G+AL++ Y +C +L+ A F
Sbjct: 532 NITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFH 591
Query: 302 EISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNE-FTFSHVLRSSLAFQLLQ 359
+ +++++SW A+I G A + +I L ++ G+RP + TF+
Sbjct: 592 SLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFT------------- 638
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIY 415
S++++ +GL+ + +++ V+P + G+
Sbjct: 639 ------------------SILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLL 680
Query: 416 NRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
R ++ E L++Q+ PD W ++ AC +G+
Sbjct: 681 GRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGN 717
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 201/418 (48%), Gaps = 40/418 (9%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
++ T+V ++ +C + K IHA++++ + D+F+ + L++ Y KC ++ AH F
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQ 359
E+ ++++SWN+LI YA + F L E +Q G+ PN+ T+ +L + + L+
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 360 ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+H II+ GY+ V SL++ Y K G ++PRA + AGI
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCG------------DLPRA---RQVFAGIS 190
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
R D+VS+N ++ A KE L LF M + I PD T++
Sbjct: 191 PR-----------------DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYI 233
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
+LL A + L G +H L + E ++SD V L+ M +CG + S+ + F + D
Sbjct: 234 NLLDAFTTPSMLDEGKRIHKLTVE-EGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIAD 292
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
R+V+ + ALI+AL +G A E++ M G +R +++L AC + G +
Sbjct: 293 RDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLI 352
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
++ G ++ + ++ + R G L +A ++ TMP + + W + G R
Sbjct: 353 HSHISED-GHSSDVQIGNALISMYARCGDLPKARELFYTMP-KRDLISWNAIIAGYAR 408
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 31/281 (11%)
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+N++ +Y + + ++ ++ R D++SWN +I+ A G K+ +LF+ M+ A
Sbjct: 65 SNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGF 124
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P+ T++S+L+AC L G +H I K D V N L+ MYGKCG + +
Sbjct: 125 IPNKITYISILTACYSPAELENGKKIHSQIIKAGY-QRDPRVQNSLLSMYGKCGDLPRAR 183
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
++F ++ R+V+++ ++ + + L F +M G PD+V I +L A
Sbjct: 184 QVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPS 243
Query: 588 LVREGMELF-----ERMNRSYGV-------------------------EPEMDHYHCVVD 617
++ EG + E +N V + ++ Y+ ++
Sbjct: 244 MLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIA 303
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAK 658
L ++GH EA + M AL T+L C +K
Sbjct: 304 ALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSK 344
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/662 (33%), Positives = 363/662 (54%), Gaps = 45/662 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC----DSLNPV 56
+P RNVV++N +IS +++ + E+AL F M G + ++ T +LS +LN
Sbjct: 177 IPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALN-- 234
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G + A +K G F + +V ++L+ +YG+ D+ VF+ + +K+++ WN+++ ++
Sbjct: 235 HGLLVHAHAIKQG-FESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVY 293
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++GF+ + M LF +++ + E ++ ++ + + LE G Q+H +IK F L
Sbjct: 294 SQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNL 353
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V N+L++MY + + A K F+ + RD +SWN II + E A L+ RM +D
Sbjct: 354 FVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILD 413
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ P++ + ++++C ++ G+ H +K LE ++F GS+L+D Y+KC +++ A
Sbjct: 414 GIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDA 473
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLR----SS 352
H +S + +++VS NALI GYA K++ SI LL E+ LG +P+E TF+ ++ S+
Sbjct: 474 HKTYSSMPERSVVSVNALIAGYALKNTKESINLLHEMQILGLKPSEITFASLIDVCKGSA 533
Query: 353 LAFQLLQLHCLIIRMGYE-NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
LQ+HC I++ G E++ SL+ Y S ++DA NI+
Sbjct: 534 KVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADA----------------NIL 577
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++E L S IV W +I+ N L L++ MR I PD
Sbjct: 578 ---------FSEFSSLKS------IVMWTALISGHIQNECSDVALNLYREMRDNNISPDQ 622
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TFV++L AC+ L +L G +H LI T D + L+DMY KCG + SSV++F
Sbjct: 623 ATFVTVLQACALLSSLHDGREIHSLIFHTGF-DLDELTSSALVDMYAKCGDVKSSVQVFE 681
Query: 532 EM-TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
E+ T ++VI+W ++I NG+A+ AL+ F EM PD V + VLTAC H G V
Sbjct: 682 ELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVY 741
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
EG ++F+ M YG+EP +DHY C+VDLL R+G LKEAE+ I + PNA+IW L
Sbjct: 742 EGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGA 801
Query: 651 CQ 652
C+
Sbjct: 802 CR 803
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 162/677 (23%), Positives = 301/677 (44%), Gaps = 82/677 (12%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQL 61
P + VS+ ++IS Y + G +AL +F M N P Q
Sbjct: 111 PHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-PDQVAL----------------- 152
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR--KSLVTWNSIVSIFGKH 119
+L Y G LD+ +F+ MP +++V WN ++S K
Sbjct: 153 -----------------VTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKT 195
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
E+ + F ++ + V + S+ V+ +++ L G +H IK GF+ + VA
Sbjct: 196 AHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVA 255
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+SL+NMY +C A ++F + ++++ WN ++G +++ +EL+L M +
Sbjct: 256 SSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIH 315
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P++ T+ ++++CA + +G+ +H+ +IK ++FV +AL+D YAK L+ A
Sbjct: 316 PDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKH 375
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL 358
F ++ ++ +SWNA+I+GY + F L + L G P+E + + +L + ++L
Sbjct: 376 FEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVL 435
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q HCL +++G E + SL+ Y+K G I DA
Sbjct: 436 EAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAH--------------------- 474
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
K S + +VS N +IA A + KE + L M+ + P TF
Sbjct: 475 -----------KTYSSMPERSVVSVNALIAGYALK-NTKESINLLHEMQILGLKPSEITF 522
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
SL+ C + LG +H I K ++ F+ L+ MY + + +F+E +
Sbjct: 523 ASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFS 582
Query: 535 D-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++++ WTALIS N + AL +REM PD+ + VL AC + +G
Sbjct: 583 SLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGR 642
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL----- 648
E+ + + G + + +VD+ + G +K + ++ + + + W + +
Sbjct: 643 EIHSLIFHT-GFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAK 701
Query: 649 EGCQRCRIAKYDTLNST 665
G +C + +D + +
Sbjct: 702 NGYAKCALKVFDEMTQS 718
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 129/528 (24%), Positives = 227/528 (42%), Gaps = 79/528 (14%)
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
KH E + + + S + + +F + + Q+L G +H VIK+G +
Sbjct: 24 KHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSF 83
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDV--VSWNTIIGALAESENFGKALELYLRMSV 235
+L+++Y +C + A +F + VSW +I ++ +AL ++ +M
Sbjct: 84 CQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRN 143
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V P+Q V V+N+ Y L+
Sbjct: 144 SAV-PDQVALVTVLNA-----------------------------------YISLGKLDD 167
Query: 296 AHLCFSE--ISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A F + I +N+V+WN +I G+A + ++ ++ + G + + T + VL +
Sbjct: 168 ACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAI 227
Query: 353 LAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ L +H I+ G+E+ YV SL+ Y K + DA R V A
Sbjct: 228 ASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDA----------RQVFDA 277
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+ + +++ WN ++ + NG V+ELF M + I+
Sbjct: 278 ----------------------ISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIH 315
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD +T+ S+LS C+ L +G LH I K +S+ FV N LIDMY K G++ + K
Sbjct: 316 PDEFTYTSILSTCACFEYLEVGRQLHSAIIKKR-FTSNLFVNNALIDMYAKAGALKEAGK 374
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
F MT R+ I+W A+I A FR M G PD V+L ++L+AC + +
Sbjct: 375 HFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKV 434
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+ G + F ++ G+E + ++D+ + G +K+A K ++MP
Sbjct: 435 LEAGQQ-FHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMP 481
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 161/384 (41%), Gaps = 44/384 (11%)
Query: 308 IVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCL 363
+ WN + G SS + + G+ P++FTF+ L + Q L L H
Sbjct: 13 VRQWNWRVQGTKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSC 72
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR-------AVVPANIIAGI-- 414
+I+ G E+ + G+L+ YAK ++ A + P A++ + AG+
Sbjct: 73 VIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPH 132
Query: 415 --------------------------YNRTGQYNETVKLLSQLERP--DIVSWNIVIAAC 446
Y G+ ++ +L Q+ P ++V+WN++I+
Sbjct: 133 EALHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGH 192
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
A Y+E L F M + T S+LSA + L L G +H K SS
Sbjct: 193 AKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESS- 251
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
+V + LI+MYGKC + ++F+ ++ +N+I W A++ NGF +E F +M
Sbjct: 252 IYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMIS 311
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
G PD ++L+ C + G +L + + + + ++D+ + G LK
Sbjct: 312 CGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKR-FTSNLFVNNALIDMYAKAGALK 370
Query: 627 EAEKIITTMPFPPNALIWRTFLEG 650
EA K M + + + W + G
Sbjct: 371 EAGKHFEHMTYRDH-ISWNAIIVG 393
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/658 (33%), Positives = 368/658 (55%), Gaps = 38/658 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
MP + V++N++IS+YS+ G + ++ M +G PT+ TF +LS + EG
Sbjct: 289 MP--STVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEG 346
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A+ +K+GL A+ FVG++L+ LY +HGC+ + VF+ K++V WN+++ F +
Sbjct: 347 QQIHAAAVKHGLD-ANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQ 405
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ E+ + +F + R+++ + +FV V+ N L+ G Q+H + IKN D +L V
Sbjct: 406 NDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFV 465
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN++++MY + I A+ +F + +D VSWN +I LA +E +A+ + RM +
Sbjct: 466 ANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGI 525
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ +F IN+C+ ++ + GK IH IK + + VGS+L+D Y+K ++E +
Sbjct: 526 APDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRK 585
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
+ + ++V NALI G + +I L ++L+ G++P+ FTF+ +L
Sbjct: 586 VLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTG--- 642
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
V+G + SY KS L++ T+L I + GIY
Sbjct: 643 -------------PVSSVIGKQVHSYTLKSALLNQD----TSLGIS--------LVGIYL 677
Query: 417 RTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ + KLL+++ + ++V W I+ A NG + L +F MR+ + D TF
Sbjct: 678 KCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFA 737
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+L ACS++ L G +HGLI K+ +S +T + L+DMY KCG + SS +IF E+ +
Sbjct: 738 SVLKACSEIAALTDGKEIHGLIIKSGFVSYET-AASALMDMYSKCGDVISSFEIFKELKN 796
Query: 536 R-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+ N++ W ++I NG+A AL F++M+ KPD V L+ VL AC H GL+ EG
Sbjct: 797 KQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRN 856
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
LF+ M++ YG+ P +DHY C++DLL R GHL+EA+++I +PF + +IW TFL CQ
Sbjct: 857 LFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQ 914
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 158/654 (24%), Positives = 299/654 (45%), Gaps = 82/654 (12%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQL 61
PD + + S+I+ Y R G + AL +F M G P Q T+ ++S
Sbjct: 224 PD--TICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIIST----------- 270
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
L GR L + ++ + + S V WN+++S + + G
Sbjct: 271 --------------------LASMGR---LSDARTLLKRIQMPSTVAWNAVISSYSQSGL 307
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ L+ ++ R + T S+F ++ ++ + G+QIH +K+G D + V +S
Sbjct: 308 ESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSS 367
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+N+Y + I A+K+F +++V WN ++ +++ + ++++ M + +
Sbjct: 368 LINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEAD 427
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TFV V+ +C L + +G+ +H IKN+++ D+FV +A++D Y+K ++ A FS
Sbjct: 428 DFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFS 487
Query: 302 EISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
I K+ VSWNALI+G A ++ ++++L + G P+E +F+ + + +
Sbjct: 488 LIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATET 547
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
Q+HC I+ + V SL+ +Y+
Sbjct: 548 GKQIHCASIKYNVCSNHAVGSSLID--------------------------------LYS 575
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G + K+L+ ++ +V N +I N E +ELF+ + P N+TF S
Sbjct: 576 KFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFAS 635
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD- 535
+LS C+ + +G +H K+ +++ DT + L+ +Y KC + + K+ E+ D
Sbjct: 636 ILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDH 695
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+N++ WTA IS NG++ ++L F M + D +VL AC + +G E+
Sbjct: 696 KNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEI 755
Query: 596 FERMNRSYGVEPE------MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
+ +S V E MD Y D++ + KE + MP+ N++I
Sbjct: 756 HGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPW--NSMI 807
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 147/596 (24%), Positives = 252/596 (42%), Gaps = 84/596 (14%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE--DMPRKSLVTWNSIVSIFGK 118
L A VL+ GL +G AL+ LYGR G + S +S++S +
Sbjct: 78 LHARVLRLGLPLR-GRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHAR 136
Query: 119 HGFVEDCMFLFCELVRSEVALTESSF--VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G D + F L R + T F V+ S LE G Q+H V+K+GF
Sbjct: 137 SGSPRDVLDAFQRL-RCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSA 195
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
LV+MY +C + A ++F + D + W ++I + +AL L+ RM
Sbjct: 196 FCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKM 255
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
P+Q T+V +I++ A + L A
Sbjct: 256 GSAPDQVTYVTIISTLASM-----------------------------------GRLSDA 280
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF 355
I + V+WNA+I Y+ + +F L ++ + G P TF+ +L ++ +
Sbjct: 281 RTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASM 340
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
Q+H ++ G + +V SL+ Y K G ISDA
Sbjct: 341 TAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDA------------------- 381
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+++ + + N IV WN ++ N +E +++F+YMR A + D+
Sbjct: 382 KKVFDFSTEKN-------------IVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADD 428
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+TFVS+L AC L +L +G +H + K + +D FV N ++DMY K G+I + +F+
Sbjct: 429 FTFVSVLGACINLDSLDIGRQVHCITIKNS-MDADLFVANAMLDMYSKLGAIDVAKALFS 487
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ ++ ++W ALI L N + A+ + M+ G PD V+ + AC +
Sbjct: 488 LIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATET 547
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP----FPPNALI 643
G ++ + Y V ++DL ++G ++ + K++ + P NALI
Sbjct: 548 GKQI-HCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALI 602
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/395 (19%), Positives = 155/395 (39%), Gaps = 78/395 (19%)
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGA--HLCFSEISNKNIVSWNALILGYASK 321
+HA+V++ L +G ALVD Y + + A L + + + ++++ +A
Sbjct: 78 LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137
Query: 322 SSPTSIFLLIELLQ--LGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYV 375
SP + + L+ +G P++F + VL R Q Q+HC +++ G+ + +
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFC 197
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
L+ YAK + DA ++ + PD
Sbjct: 198 QAGLVDMYAKCVEVKDAR--------------------------------RVFDGIACPD 225
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
+ W +IA G Y++ L LF M PD T+V+++S + + L S
Sbjct: 226 TICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRL---SDART 282
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
L+K+ ++ S+ + W A+IS+ +G
Sbjct: 283 LLKRIQMPST---------------------------------VAWNAVISSYSQSGLES 309
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
+++M+ G P R ++L+A EG ++ + +G++ + +
Sbjct: 310 EVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVK-HGLDANVFVGSSL 368
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++L V++G + +A+K+ N ++W L G
Sbjct: 369 INLYVKHGCISDAKKVF-DFSTEKNIVMWNAMLYG 402
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFT-FGGLLSCDSLNPV-EGAQL 61
+N++ +NS+I +++ GY +AL +F M +P + T G L++C + EG L
Sbjct: 798 QNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNL 857
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKH 119
S+ + L+ L GR G L E V + +P R V W + ++ H
Sbjct: 858 FDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMH 916
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/658 (33%), Positives = 366/658 (55%), Gaps = 44/658 (6%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGAQLQ 62
+ V++N++I++YS+ G + ++ M +G PT+ TF +LS + EG Q+
Sbjct: 288 STVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIH 347
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
A+ +K+GL A+ FVG++L+ LY +HGC+ + VF+ K++V WN+I+ F ++
Sbjct: 348 ATAVKHGLD-ANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQ 406
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
E+ + +F + R+++ + +FV V+ N L+ G Q+H + IKNG D +L VAN++
Sbjct: 407 EETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAM 466
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
++MY + I A+ +F + ++D VSWN +I LA +E G+A+ + RM + ++
Sbjct: 467 LDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDE 526
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
+F IN+C+ + GK IH+ IK + + VGS+L+D Y+K ++E + +
Sbjct: 527 VSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAH 586
Query: 303 ISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQL 357
+ +IV NALI G + +I L ++L+ G++P+ FTF+ +L R +
Sbjct: 587 VDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIG 646
Query: 358 LQLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
Q+HC ++ N + LG SL+ Y K L+ DA
Sbjct: 647 KQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDA------------------------ 682
Query: 417 RTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
KLL ++ + ++V W I+ A NG + L +F MR+ + D TF
Sbjct: 683 --------NKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFT 734
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+L ACS++ L G +HGLI K+ +S +T + L+DMY KCG + SS +IF E+ +
Sbjct: 735 SVLKACSEMAALTDGKEIHGLIVKSGFVSYET-ATSALMDMYSKCGDVISSFEIFKELKN 793
Query: 536 R-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
R N++ W ++I NG+A AL F++M+ KPD V L+ VL AC H GL+ EG+
Sbjct: 794 RQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLH 853
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+ M++ YG+ P +DHY C++DLL R GHL++A+++I +PF + +IW T+L CQ
Sbjct: 854 FFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQ 911
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 163/679 (24%), Positives = 304/679 (44%), Gaps = 84/679 (12%)
Query: 12 IISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLF 71
++SA SR G +E ++ ++ GF + F GL+ + G A + +G+
Sbjct: 163 VLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVD---MYAKCGEVDDARRMFDGIA 219
Query: 72 CADAFVGTALLGLYGRHGCLDEVVSVFEDMPR---------------------------- 103
C D T+++ Y R G + +++F M +
Sbjct: 220 CPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDART 279
Query: 104 -------KSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
S V WN++++ + + G + L+ ++ + + T S+F ++ +N
Sbjct: 280 LLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTA 339
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
+ G QIH +K+G D + V +SL+N+Y + I A+K+F +++V WN I+
Sbjct: 340 FDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYG 399
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
++E + ++++ M + + TFV V+ +C L + LG+ +H IKN ++ D
Sbjct: 400 FVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDAD 459
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQ 335
+FV +A++D Y+K ++ A FS I K+ VSWNALI+G A ++ +I +L +
Sbjct: 460 LFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKF 519
Query: 336 LGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
G +E +F+ + + + Q+H I+ + V SL+
Sbjct: 520 YGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLID---------- 569
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
+Y++ G + K+L+ ++ IV N +I N
Sbjct: 570 ----------------------LYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNR 607
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
E +ELF+ + P N+TF S+LS C++ + +G +H K+ I++ DT +
Sbjct: 608 EDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGI 667
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
L+ +Y KC + + K+ E+ D +N++ WTA IS NG++ ++L F M +
Sbjct: 668 SLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVR 727
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE------MDHYHCVVDLLVRYGH 624
D +VL AC + +G E+ + +S V E MD Y D++ +
Sbjct: 728 SDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEI 787
Query: 625 LKEAEKIITTMPFPPNALI 643
KE + MP+ N++I
Sbjct: 788 FKELKNRQNIMPW--NSMI 804
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 158/583 (27%), Positives = 283/583 (48%), Gaps = 59/583 (10%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQ 60
++N+V +N+I+ + + E+ ++MF YM E FTF +L +C +L ++ G Q
Sbjct: 387 EKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQ 446
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ +KNG+ AD FV A+L +Y + G +D ++F +P K V+WN+++ +
Sbjct: 447 VHCITIKNGMD-ADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNE 505
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + + + +AL E SF I+ SN +E G+QIH IK V +
Sbjct: 506 EEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGS 565
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL+++Y + + S+ K+ V+ +V N +I L ++ +A+EL+ ++ D P
Sbjct: 566 SLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKP 625
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLEGAHLC 299
+ TF +++ C +S++GK +H +K+A L D +G +LV Y KC LE A+
Sbjct: 626 SNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKL 685
Query: 300 FSEISN-KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
E+ + KN+V W A I GYA S S+ + + R +E TF+ VL++
Sbjct: 686 LEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAA 745
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L ++H LI++ G+ +YE +LM Y+K G + + L
Sbjct: 746 LTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELK------------- 792
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
R +I+ WN +I A NG E L LF+ M+ ++I PD+ T
Sbjct: 793 ------------------NRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVT 834
Query: 474 FVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
+ +L ACS ++ G S ++G++ + D + C LID+ G+ G + +
Sbjct: 835 LLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRV-----DHYAC--LIDLLGRGGHLQKA 887
Query: 527 VKIFNEMTDR-NVITWTALISALGLNGFAQR---ALEKFREME 565
++ +++ R + + W ++A ++ +R A +K EME
Sbjct: 888 QEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVEME 930
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 150/597 (25%), Positives = 258/597 (43%), Gaps = 86/597 (14%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLD---EVVSVFEDMPRKSLVTWNSIVSIFG 117
L A +L+ GL +G AL+ LYGR G + ++ P S +S++S
Sbjct: 75 LHARILRLGLPLR-GRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAA-SSVLSCHA 132
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSF--VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ G D + F + +R + T F V+ S LE G Q+H V+K+GF
Sbjct: 133 RSGSPRDVLDAF-QRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSS 191
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ LV+MY +C + A +MF + D + W ++I + +AL L+ RM
Sbjct: 192 VFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEK 251
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
P+Q T V +I++ A + L
Sbjct: 252 MGSVPDQVTCVTIISTLASM-----------------------------------GRLGD 276
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSS-- 352
A I + V+WNA+I Y+ + +F L ++ + G P TF+ +L ++
Sbjct: 277 ARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAAN 336
Query: 353 -LAF-QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
AF + Q+H ++ G + +V SL+ Y K G ISDA
Sbjct: 337 MTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDA------------------ 378
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+++ + + N IV WN ++ N +E +++F+YMR A + D
Sbjct: 379 -KKVFDFSTEKN-------------IVMWNAILYGFVQNELQEETIQMFQYMRRADLEAD 424
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
++TFVS+L AC L +L LG +H + K + +D FV N ++DMY K G+I + +F
Sbjct: 425 DFTFVSVLGACINLYSLDLGRQVHCITIKNG-MDADLFVANAMLDMYSKLGAIDVAKALF 483
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + ++ ++W ALI L N A+ + M+F G D V+ + AC + +
Sbjct: 484 SLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIE 543
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP----FPPNALI 643
G ++ + Y V ++DL ++G ++ + K++ + P NALI
Sbjct: 544 TGKQI-HSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALI 599
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 218/662 (32%), Positives = 353/662 (53%), Gaps = 45/662 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC----DSLNPV 56
MP+ NVV++N +IS + + G +A+ F M G + T+ T G +LS ++LN
Sbjct: 309 MPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALN-- 366
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G + A +K GL ++ +VG++L+ +Y + ++ VF+ + ++LV WN+++ +
Sbjct: 367 YGLLVHAQAIKQGLN-SNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGY 425
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G+ M LF E+ E ++ ++ + + LE G Q+H +IK+ F+Y L
Sbjct: 426 AQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNL 485
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V N+LV+MY +C + A + F+ + RD VSWN II + E+ +A ++ RM +D
Sbjct: 486 FVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILD 545
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ P++ + +++ CA LQ G+ +H ++K+ L+ ++ GS+L+D Y KC +E A
Sbjct: 546 GIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAA 605
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
FS + ++++VS NA+I GYA +I L E+ G P+E TF+ +L +
Sbjct: 606 RYVFSCMPSRSVVSMNAIIAGYAQNDLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPY 665
Query: 357 LL----QLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L Q+HCLI + G LG SL+ Y S +DA + P++ +
Sbjct: 666 KLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTIL---- 721
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
W +I+ NG +E L+L++ M PD
Sbjct: 722 ---------------------------WTAIISGHTQNGCSEEALQLYQEMHRNNARPDQ 754
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF S+L ACS L +L G +H LI + SD + ++DMY KCG + SSV++F
Sbjct: 755 ATFASVLRACSILASLGDGRMIHSLIFHVGL-DSDELTGSAVVDMYAKCGDMKSSVQVFE 813
Query: 532 EMTDRN-VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
EM +N VI+W ++I NG+A+ AL+ F EM+ +PD V + VLTAC H G V
Sbjct: 814 EMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVS 873
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
EG E+F+ M SY + P +DH C++DLL R+G LKEAE+ I + F PNA+IW T L
Sbjct: 874 EGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGA 933
Query: 651 CQ 652
C+
Sbjct: 934 CR 935
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 149/581 (25%), Positives = 266/581 (45%), Gaps = 75/581 (12%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ A LK G F + +G+A++ LY + G ++ F + ++ ++ WNS++S++ + G
Sbjct: 103 IHAQTLKFG-FGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQG 161
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+E ++ F L V+ + ++ V+ + D++ G+Q+H VIK GF++
Sbjct: 162 SLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEG 221
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL++MY +C + A K+F V D VSW +I + +AL+++ M + P
Sbjct: 222 SLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVP 281
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+Q FV VI +C G LG+ A CD+FV
Sbjct: 282 DQVAFVTVITACVG-----LGRLDDA--------CDLFV--------------------- 307
Query: 301 SEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
++ N N+V+WN +I G+ + +I + + G + T VL + + + L
Sbjct: 308 -QMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALN 366
Query: 360 ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+H I+ G + YV SL+ YAK + A AL+ R +V N + G Y
Sbjct: 367 YGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALD-ERNLVLWNAMLGGY 425
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G ++ +KL S+ MR +PD +T+
Sbjct: 426 AQNGYASKVMKLFSE-------------------------------MRGCGFWPDEFTYT 454
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+LSAC+ L L +G LH I K + FV N L+DMY KCG++ + + F + +
Sbjct: 455 SILSACACLECLEMGRQLHSFIIKHN-FEYNLFVENTLVDMYAKCGALEEARQQFEFIRN 513
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
R+ ++W A+I A FR M G PD V+L ++L+ C + + +G ++
Sbjct: 514 RDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQV 573
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+ +S G++ + ++D+ V+ G ++ A + + MP
Sbjct: 574 HCFLVKS-GLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMP 613
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 204/418 (48%), Gaps = 49/418 (11%)
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
Q S K+IHA+ +K +GSA+VD YAKC N+E A F+++ ++I++WN+++
Sbjct: 95 QASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVL 154
Query: 316 LGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYE 370
Y+ + S + LQ G PN+FT++ VL S + Q+HC +I+MG+E
Sbjct: 155 SMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFE 214
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ GSL+ Y+K G + DA A+ P V +IAG Y + G E +K+
Sbjct: 215 FNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAG-YVQVGLPEEALKVFED 273
Query: 431 LER----PD-------------------------------IVSWNIVIAACAHNGDYKEV 455
+++ PD +V+WN++I+ G E
Sbjct: 274 MQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEA 333
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
++ FK M + T S+LSA + L L G +H K + ++S+ +V + LI+
Sbjct: 334 IDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIK-QGLNSNVYVGSSLIN 392
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY KC + ++ K+F+ + +RN++ W A++ NG+A + ++ F EM GF PD
Sbjct: 393 MYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFT 452
Query: 576 LIAVLTACRHGGLVREGMELFE---RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
++L+AC + G +L + N Y + E + +VD+ + G L+EA +
Sbjct: 453 YTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVE----NTLVDMYAKCGALEEARQ 506
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/653 (32%), Positives = 349/653 (53%), Gaps = 33/653 (5%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ 60
P NV +NSII A + G +AL ++ +P +TF ++ +C L E A+
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 61 -LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ VL G F +D ++G AL+ +Y R LD+ VFE+MP + +V+WNS++S + +
Sbjct: 136 SIHDRVLDMG-FGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G+ + + ++ V + V+ +E G+ IHGL+ K G +++V
Sbjct: 195 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 254
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L++MY + G+ ++F + +RD VSWNT+I ++ + ++++L++ M V+
Sbjct: 255 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFK 313
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ T ++ +C L + GK +H +I + ECD + L++ YAKC NL +
Sbjct: 314 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 373
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
FS + K+ VSWN++I Y S L ++++ +P+ T+ +L S++ QL
Sbjct: 374 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLL--SMSTQLGD 431
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
LH +G E L AK G S+ +V +N + +Y + G
Sbjct: 432 LH-----LGKE--------LHCDLAKMGFNSN-------------IVVSNTLVDMYAKCG 465
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+ +++K+ ++ DI++WN +IA+C H+ D L + MR + PD T +S+L
Sbjct: 466 EMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILP 525
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
CS L G +HG I K + SD V N+LI+MY KCGS+ +S ++F M ++V+
Sbjct: 526 VCSLLAAKRQGKEIHGCIFKLGL-ESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVV 584
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
TWTALISA G+ G ++A+ F EME G PD VA +A++ AC H GLV EG+ F RM
Sbjct: 585 TWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRM 644
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ Y +EP ++HY CVVDLL R L +AE I +MP P++ IW L C+
Sbjct: 645 KKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACR 697
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 144/576 (25%), Positives = 280/576 (48%), Gaps = 48/576 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP R+VVS+NS+IS Y+ GY +AL ++ N G P +T +L +C L VE
Sbjct: 176 MPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG 235
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ +++ D V LL +Y + L + +F+ M + V+WN+++ + +
Sbjct: 236 DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQV 295
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G E+ + LF E+V ++ + ++ + DLEFG+ +H +I +G++ + +
Sbjct: 296 GLYEESIKLFMEMV-NQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTAS 354
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L+NMY +C + +++++F ++ +D VSWN++I ++ +F +A++L+ M D V
Sbjct: 355 NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VK 413
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ T+V +++ L + LGK +H + K ++ V + LVD YAKC + +
Sbjct: 414 PDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKV 473
Query: 300 FSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLR--SSLAF- 355
F + ++I++WN +I S+ + ++ + G P+ T +L S LA
Sbjct: 474 FENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAK 533
Query: 356 -QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q ++H I ++G E+ ++P N++ +
Sbjct: 534 RQGKEIHGCIFKLGLES----------------------------DVP----VGNVLIEM 561
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y++ G + ++ ++ D+V+W +I+AC G+ K+ + F M AA I PD+ F
Sbjct: 562 YSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAF 621
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNE 532
V+++ ACS + G + +KK I + + C ++D+ + + +
Sbjct: 622 VAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYAC--VVDLLSRSALLDKAEDFILS 679
Query: 533 MTDR-NVITWTALISALGLNG---FAQRALEKFREM 564
M + + W AL+SA ++G A+R E+ E+
Sbjct: 680 MPLKPDSSIWGALLSACRMSGDTEIAERVSERIIEL 715
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 136/295 (46%), Gaps = 34/295 (11%)
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
QL +LH LII +G + L+ YA D ++ ++ R P+N
Sbjct: 31 QLHKLHSLIITLGLHHSVIFSAKLIAKYAH---FRDP---TSSFSVFRLASPSN------ 78
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
++ WN +I A HNG + E L L+ + R+ PD YTF
Sbjct: 79 -------------------NVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFP 119
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+++AC+ L + + S+H + SD ++ N LIDMY + + + K+F EM
Sbjct: 120 SVINACAGLLDFEMAKSIHDRVLDMG-FGSDLYIGNALIDMYCRFNDLDKARKVFEEMPL 178
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
R+V++W +LIS NG+ ALE + LG PD + +VL AC G V EG ++
Sbjct: 179 RDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG-DI 237
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ G++ ++ + ++ + ++ L + +I M +A+ W T + G
Sbjct: 238 IHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVL-RDAVSWNTMICG 291
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 209/657 (31%), Positives = 345/657 (52%), Gaps = 41/657 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ 60
P NV +NSII A + G +AL ++ +P +TF ++ +C L E A+
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 194
Query: 61 -LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ VL G F +D ++G AL+ +Y R LD+ VFE+MP + +V+WNS++S + +
Sbjct: 195 SIHDRVLXMG-FGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 253
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G+ + + ++ V + V+ +E G+ IHGL+ K G +++V
Sbjct: 254 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 313
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L++MY + G+ ++F + +RD VSWNT+I ++ + ++++L++ M V+
Sbjct: 314 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFK 372
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ T ++ +C L + GK +H +I + ECD + L++ YAKC NL +
Sbjct: 373 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 432
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL- 358
FS + K+ VSWN++I Y S L ++++ +P+ T+ +L S L
Sbjct: 433 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLX 492
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+LHC + +MG+ + +V +N + +Y
Sbjct: 493 LGKELHCDLAKMGFNS--------------------------------NIVVSNTLVDMY 520
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G+ +++K+ ++ DI++WN +IA+C H+ D L + MR + PD T +
Sbjct: 521 AKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATML 580
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+L CS L G +HG I K + SD V N+LI+MY KCGS+ +S ++F M
Sbjct: 581 SILPVCSLLAAKRQGKEIHGCIFKLGL-ESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKT 639
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
++V+TWTALISA G+ G ++A+ F EME G PD VA +A++ AC H GLV EG+
Sbjct: 640 KDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNY 699
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F RM + Y +EP ++HY CVVDLL R L +AE I +MP P++ IW L C+
Sbjct: 700 FHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACR 756
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/576 (25%), Positives = 280/576 (48%), Gaps = 48/576 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP R+VVS+NS+IS Y+ GY +AL ++ N G P +T +L +C L VE
Sbjct: 235 MPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG 294
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ +++ D V LL +Y + L + +F+ M + V+WN+++ + +
Sbjct: 295 DIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQV 354
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G E+ + LF E+V ++ + ++ + DLEFG+ +H +I +G++ + +
Sbjct: 355 GLYEESIKLFMEMV-NQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTAS 413
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L+NMY +C + +++++F ++ +D VSWN++I ++ +F +A++L+ M D V
Sbjct: 414 NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VK 472
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ T+V +++ L + LGK +H + K ++ V + LVD YAKC + +
Sbjct: 473 PDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKV 532
Query: 300 FSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLR--SSLAF- 355
F + ++I++WN +I S+ + ++ + G P+ T +L S LA
Sbjct: 533 FENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAK 592
Query: 356 -QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q ++H I ++G E+ ++P N++ +
Sbjct: 593 RQGKEIHGCIFKLGLES----------------------------DVP----VGNVLIEM 620
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y++ G + ++ ++ D+V+W +I+AC G+ K+ + F M AA I PD+ F
Sbjct: 621 YSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAF 680
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNE 532
V+++ ACS + G + +KK I + + C ++D+ + + +
Sbjct: 681 VAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYAC--VVDLLSRSALLDKAEDFILS 738
Query: 533 MTDR-NVITWTALISALGLNG---FAQRALEKFREM 564
M + + W AL+SA ++G AQR E+ E+
Sbjct: 739 MPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIEL 774
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 136/295 (46%), Gaps = 34/295 (11%)
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
QL +LH LII +G + L+ YA D ++ ++ R P+N
Sbjct: 90 QLHKLHSLIITLGLHHSVIFSAKLIAKYAH---FRDP---TSSFSVFRLASPSN------ 137
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
++ WN +I A HNG + E L L+ + R+ PD YTF
Sbjct: 138 -------------------NVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFP 178
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+++AC+ L + + S+H + SD ++ N LIDMY + + + K+F EM
Sbjct: 179 SVINACAGLLDFEMAKSIHDRVLXMG-FGSDLYIGNALIDMYCRFNDLDKARKVFEEMPL 237
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
R+V++W +LIS NG+ ALE + LG PD + +VL AC G V EG ++
Sbjct: 238 RDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEG-DI 296
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ G++ ++ + ++ + ++ L + +I M +A+ W T + G
Sbjct: 297 IHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVL-RDAVSWNTMICG 350
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 203/656 (30%), Positives = 353/656 (53%), Gaps = 39/656 (5%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQL 61
DR+VV +N++I+A ++ G+ +A + M + G + T+ +L +C + +E +L
Sbjct: 292 DRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKL 351
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
S + +D +G AL+ +Y R G L + +F MP++ L++WN+I++ + +
Sbjct: 352 IHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARRED 411
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ M L+ ++ V +F+ ++ +N G+ IH ++++G +AN+
Sbjct: 412 RGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANA 471
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+NMY +C + A+ +F+ + RDV+SWN++I A+ ++ A +L+ M + + P+
Sbjct: 472 LMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPD 531
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TF V++ C + LGK IH ++ ++ L+ DV +G+AL++ Y +C +L+ A F
Sbjct: 532 NITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFH 591
Query: 302 EISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
+ +++++SW A+I G A + +I L ++ G+RP + TFS +L+ + L
Sbjct: 592 SLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDE 651
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
++ I+ GYE V +L+++Y+KSG ++DA
Sbjct: 652 GKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAR----------------------- 688
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
++ ++ DIVSWN +IA A NG + +E M+ + P+ ++FVS
Sbjct: 689 ---------EVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVS 739
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LL+ACS L G +H I K + + D V LI MY KCGS G + ++F+ + ++
Sbjct: 740 LLNACSSFSALEEGKRVHAEIVKRK-LQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEK 798
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
NV+TW A+I+A +G A +AL F ME G KPD ++L+AC H GLV EG ++F
Sbjct: 799 NVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIF 858
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M YGV P ++HY C+V LL R +EAE +I MPFPP+A +W T L C+
Sbjct: 859 SSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACR 914
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 187/657 (28%), Positives = 344/657 (52%), Gaps = 43/657 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+V+S+NS+IS Y++ G+ + A ++F M N GF P + T+ +L+ C S +E G
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ + ++K G + D V +LL +YG+ G L VF + + +V++N+++ ++ +
Sbjct: 148 KKIHSQIIKAG-YQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQ 206
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+V++C+ LF ++ ++ + +++ ++ + L+ G++IH L ++ G + ++ V
Sbjct: 207 KAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRV 266
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LV M +C + SA++ FK RDVV +N +I ALA+ + +A E Y RM D V
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV 326
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N+TT++ ++N+C+ + GK IH+ + ++ DV +G+AL+ YA+C +L A
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARE 386
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVL----RSSL 353
F + ++++SWNA+I GYA + L + +Q G +P TF H+L SS
Sbjct: 387 LFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSA 446
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+H I+R G ++ ++ +LM Y + G + +A N+ G
Sbjct: 447 YADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEA---------------QNVFEG 491
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
R D++SWN +IA A +G Y+ +LF+ M+ + PDN T
Sbjct: 492 TQAR-----------------DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNIT 534
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F S+LS C L LG +HG I ++ + D + N LI+MY +CGS+ + +F+ +
Sbjct: 535 FASVLSGCKNPEALELGKQIHGRITESG-LQLDVNLGNALINMYIRCGSLQDARNVFHSL 593
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
R+V++WTA+I G +A+E F +M+ GF+P + ++L C + EG
Sbjct: 594 QHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGK 653
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++ + S G E + + ++ + G + +A ++ MP + + W + G
Sbjct: 654 KVIAYILNS-GYELDTGVGNALISAYSKSGSMTDAREVFDKMP-SRDIVSWNKIIAG 708
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 148/580 (25%), Positives = 294/580 (50%), Gaps = 34/580 (5%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D F+ L+ +Y + + + VF++MPR+ +++WNS++S + + GF + LF E+
Sbjct: 61 DIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ 120
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
+ + +++ ++ + +LE G++IH +IK G+ + V NSL++MY +C +
Sbjct: 121 NAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLP 180
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
A ++F + RDVVS+NT++G A+ + L L+ +MS + + P++ T++ ++++
Sbjct: 181 RARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFT 240
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
GK IH ++ L D+ VG+ALV +C +++ A F +++++V +NA
Sbjct: 241 TPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNA 300
Query: 314 LILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY 372
LI A F + G N T+ +L + + L+
Sbjct: 301 LIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEA------------ 348
Query: 373 EYVLGSLMTSY-AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
G L+ S+ ++ G SD V N + +Y R G + +L +
Sbjct: 349 ----GKLIHSHISEDGHSSD-------------VQIGNALISMYARCGDLPKARELFYTM 391
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
+ D++SWN +IA A D E + L+K M++ + P TF+ LLSAC+ A G
Sbjct: 392 PKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGK 451
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H I ++ I S+ + N L++MY +CGS+ + +F R+VI+W ++I+ +
Sbjct: 452 MIHEDILRSGI-KSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQH 510
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G + A + F+EM+ +PD + +VL+ C++ + G ++ R+ S G++ +++
Sbjct: 511 GSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES-GLQLDVNL 569
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ ++++ +R G L++A + ++ + + W + GC
Sbjct: 570 GNALINMYIRCGSLQDARNVFHSLQH-RDVMSWTAMIGGC 608
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 148/560 (26%), Positives = 272/560 (48%), Gaps = 41/560 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
MP R+++S+N+II+ Y+R +A+R++ M + G +P + TF LLS +S +G
Sbjct: 391 MPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADG 450
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +L++G+ ++ + AL+ +Y R G L E +VFE + +++WNS+++ +
Sbjct: 451 KMIHEDILRSGIK-SNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQ 509
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG E LF E+ E+ +F V+ G N + LE G+QIHG + ++G ++ +
Sbjct: 510 HGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNL 569
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+NMY +C + A +F ++ RDV+SW +IG A+ KA+EL+ +M +
Sbjct: 570 GNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGF 629
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P ++TF ++ C GK + A ++ + E D VG+AL+ Y+K ++ A
Sbjct: 630 RPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDARE 689
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F ++ +++IVSWN +I GYA T++ ++ + PN+F+F +L + +F
Sbjct: 690 VFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSA 749
Query: 358 LQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L+ +H I++ + V +L++ YAK
Sbjct: 750 LEEGKRVHAEIVKRKLQGDVRVGAALISMYAK---------------------------- 781
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
G E ++ + ++V+WN +I A A +G + L F M I PD T
Sbjct: 782 ----CGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGST 837
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F S+LSAC+ + G + ++ + L+ + G+ + + N+M
Sbjct: 838 FTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQM 897
Query: 534 T-DRNVITWTALISALGLNG 552
+ W L+ A ++G
Sbjct: 898 PFPPDAAVWETLLGACRIHG 917
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 132/517 (25%), Positives = 255/517 (49%), Gaps = 46/517 (8%)
Query: 142 SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKD 201
+++V ++ + ++ L ++IH +++ ++ ++N L+NMY +C + A ++FK+
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC---AGLQNS 258
+ RDV+SWN++I A+ KA +L+ M PN+ T++ ++ +C A L+N
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELEN- 146
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
GK IH+++IK + D V ++L+ Y KC +L A F+ IS +++VS+N ++ Y
Sbjct: 147 --GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLY 204
Query: 319 ASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYE 373
A K+ + L ++ G P++ T+ ++L + +L ++H L + G +
Sbjct: 205 AQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDI 264
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
V +L+T + G + A G +R
Sbjct: 265 RVGTALVTMCVRCGDVDSA---------------KQAFKGTADR---------------- 293
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
D+V +N +IAA A +G E E + MR+ + + T++S+L+ACS L G +
Sbjct: 294 -DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLI 352
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H I + + SSD + N LI MY +CG + + ++F M R++I+W A+I+
Sbjct: 353 HSHISE-DGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARRED 411
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
A+ +++M+ G KP RV + +L+AC + +G + E + RS G++ +
Sbjct: 412 RGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLAN 470
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++++ R G L EA+ + + + W + + G
Sbjct: 471 ALMNMYRRCGSLMEAQNVFEGTQ-ARDVISWNSMIAG 506
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 201/422 (47%), Gaps = 43/422 (10%)
Query: 240 PNQT---TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
P +T T+V ++ +C + K IHA++++ + D+F+ + L++ Y KC ++ A
Sbjct: 22 PTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDA 81
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAF 355
H F E+ ++++SWN+LI YA + F L E +Q G+ PN+ T+ +L + +
Sbjct: 82 HQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSP 141
Query: 356 QLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L+ +H II+ GY+ V SL++ Y K G ++PRA +
Sbjct: 142 AELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCG------------DLPRA---RQVF 186
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
AGI R D+VS+N ++ A KE L LF M + I PD
Sbjct: 187 AGISPR-----------------DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDK 229
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
T+++LL A + L G +H L + E ++SD V L+ M +CG + S+ + F
Sbjct: 230 VTYINLLDAFTTPSMLDEGKRIHKLTVE-EGLNSDIRVGTALVTMCVRCGDVDSAKQAFK 288
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
DR+V+ + ALI+AL +G A E++ M G +R +++L AC +
Sbjct: 289 GTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEA 348
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G + ++ G ++ + ++ + R G L +A ++ TMP + + W + G
Sbjct: 349 GKLIHSHISED-GHSSDVQIGNALISMYARCGDLPKARELFYTMP-KRDLISWNAIIAGY 406
Query: 652 QR 653
R
Sbjct: 407 AR 408
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 209/661 (31%), Positives = 354/661 (53%), Gaps = 41/661 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPVE-G 58
+P+ NVV++N +IS +++ G+ E+A+ FL + G + T+ + G +LS SL+ + G
Sbjct: 269 IPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYG 328
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + A +K GL + +VG+AL+ +Y + +D VF + +++V WN+++ F +
Sbjct: 329 SMVHAQAIKEGL-DDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQ 387
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G ++ M F + R E +F + ++ L+FG Q+H ++IKN F L V
Sbjct: 388 NGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFV 447
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN+LV+MY + + A K F+ ++I D VSWN II + E +A ++ RM + V
Sbjct: 448 ANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGV 507
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ + ++++CA ++ G+ H ++K L+ GS+L+D Y KC + A
Sbjct: 508 LPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARD 567
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQL 357
F + +N+VS NALI GY +I L E+ +G +P E TF+ +L AF L
Sbjct: 568 VFYSMPYRNVVSINALIAGYTMSHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFML 627
Query: 358 ---LQLHCLIIRMGY-ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q+H +++ G+ + E V SL+ Y S +D+ + L P+
Sbjct: 628 NLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKG--------- 678
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+V W +I+ A +++ L+ +++MR+ I PD T
Sbjct: 679 ----------------------LVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAT 716
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F S+L AC+ + +L G +H LI T + D C+ LIDMY KCG + S+++F+EM
Sbjct: 717 FASVLRACAGMSSLQTGQEVHSLIFHTG-FNMDEITCSSLIDMYAKCGDVKGSLQVFHEM 775
Query: 534 TDRN-VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
RN VI+W ++I L NG+A+ ALE F++ME PD V + VL+AC H G V EG
Sbjct: 776 PRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEG 835
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++F+ M +Y ++P +DH C+VD+L R+G L EAE+ I + + ++W T L C+
Sbjct: 836 RKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACR 895
Query: 653 R 653
+
Sbjct: 896 K 896
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 182/728 (25%), Positives = 312/728 (42%), Gaps = 111/728 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+ ++V ++NS++S Y G ++ F+ M N G P +FTF +LS C L + G
Sbjct: 102 LEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYG 161
Query: 59 AQLQASVLKNGL----FCA--------------------------DAFVGTALLGLYGRH 88
Q+ V K G FC D T L+ Y R
Sbjct: 162 KQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRD 221
Query: 89 GCLDEVVSVFEDM-----------------------------------PRKSLVTWNSIV 113
G E V VF+ M P ++V WN ++
Sbjct: 222 GFPMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMI 281
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
S K GF E+ + F EL ++ + T SS V+ +++ L +G +H IK G D
Sbjct: 282 SGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLD 341
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ V ++LVNMY +C+ + +A+++F + R++V WN ++G A++ + +E + M
Sbjct: 342 DNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYM 401
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
P++ TF + ++CA L G +H +IKN ++FV +ALVD YAK L
Sbjct: 402 KRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGAL 461
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
+ A F + + VSWNA+I+GY + + + F+ ++ G P+E + + ++ +
Sbjct: 462 KEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSAC 521
Query: 353 LAF----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
Q Q HCL++++G + SL+ Y K G++ A ++ V
Sbjct: 522 ANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSIN 581
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+IAG +S LE E + LF+ ++ +
Sbjct: 582 ALIAGY------------TMSHLE---------------------EAIHLFQEIQMVGLK 608
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P TF LL C L LG +HG + K +SS VC L+ MY S
Sbjct: 609 PTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSET 668
Query: 529 IFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+F+E+ + ++ WTALIS ++AL+ ++ M PD+ +VL AC
Sbjct: 669 LFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMS 728
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHC--VVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
++ G E+ + + MD C ++D+ + G +K + ++ MP + + W
Sbjct: 729 SLQTGQEVHSLI---FHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWN 785
Query: 646 TFLEGCQR 653
+ + G +
Sbjct: 786 SMIVGLAK 793
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 142/535 (26%), Positives = 246/535 (45%), Gaps = 49/535 (9%)
Query: 149 HGLSNE------QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
H L NE Q L + IH +K G + L+ N +V++Y +C + A+K F +
Sbjct: 43 HNLFNEKPKAVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRL 102
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
E +DV +WN+++ + F ++ ++ M V PN+ TF V+++C+GLQ+ GK
Sbjct: 103 EKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGK 162
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
+H V K F L+D YAKC NL A L F N + VSW LI GY
Sbjct: 163 QVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDG 222
Query: 323 SPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAF-QLLQLHCLIIRMGYENYEYVLGSLM 380
P + + +Q +G+ P++ V+ + +A +L L ++ N ++
Sbjct: 223 FPMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKLFTQIPNPNV-VAWNVMI 281
Query: 381 TSYAKSGLISDALAFV-----TALNIPRA------------------------------- 404
+ +AK G +A++F T L R+
Sbjct: 282 SGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLD 341
Query: 405 --VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
V + + +Y + + + ++ + L +IV WN ++ A NG +EV+E F YM
Sbjct: 342 DNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYM 401
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ PD +TF S+ SAC+ L L G LH ++ K + +S+ FV N L+DMY K G+
Sbjct: 402 KRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNK-FTSNLFVANALVDMYAKSGA 460
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ + K F M + ++W A+I + A FR M G PD V+L ++++A
Sbjct: 461 LKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSA 520
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
C + ++G + + + G++ ++D+ V+ G + A + +MP+
Sbjct: 521 CANVKEFKQGQQCHCLLVK-VGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPY 574
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 212/660 (32%), Positives = 356/660 (53%), Gaps = 41/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPVE-G 58
MP+RNVV++N +IS +++ GY +A+ F M G + T+ T G +LS SL ++ G
Sbjct: 287 MPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFG 346
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A LK GL ++ +VG++L+ +Y + G ++ VF+ + +++V WN+++ + +
Sbjct: 347 LLVHAEALKQGLH-SNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQ 405
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G+ + M LF + + ++ ++ + + L+ G Q+H ++IKN F L V
Sbjct: 406 NGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFV 465
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LV+MY + + A + F+ + RD VSWN II + E+ +A L+ RM++ +
Sbjct: 466 GNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGI 525
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ + ++++CA ++ GK +H +K E ++ GS+L+D YAKC ++ AH
Sbjct: 526 LPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHK 585
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
+ + +++VS NALI GYA + ++ L ++L G E TF+ +L + Q L
Sbjct: 586 ILACMPERSVVSMNALIAGYAQINLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKL 645
Query: 359 ----QLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q+H LI++MG + + LG SL+ Y S +DA + + P++ V
Sbjct: 646 NLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVV------ 699
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
W +I+ + N L+L+K MR+ + PD T
Sbjct: 700 -------------------------WTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQAT 734
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FVS L AC+ + ++ G+ H LI T SD + L+DMY KCG + SS+++F EM
Sbjct: 735 FVSALRACAVVSSIKDGTETHSLIFHTGF-DSDELTSSALVDMYAKCGDVKSSMQVFKEM 793
Query: 534 T-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ ++VI+W ++I NG+A+ AL F EM+ PD V + VLTAC H G V EG
Sbjct: 794 SRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEG 853
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+F+ M YG++P DH C+VDLL R+G LKEAE+ I + F P+A +W T L C+
Sbjct: 854 RLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACR 913
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 187/723 (25%), Positives = 334/723 (46%), Gaps = 107/723 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+ D++++++NSI+S +S+ G+ ++ F + N G P +FTF +LS C L V+ G
Sbjct: 120 LEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCG 179
Query: 59 AQLQASVLKNGL----FCADAFVG--------------------------TALLGLYGRH 88
Q+ +V+K G +C A +G T+++G Y +
Sbjct: 180 RQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKV 239
Query: 89 GCLDEVVSVFEDM-----------------------------------PRKSLVTWNSIV 113
G +E V VF++M P +++V WN ++
Sbjct: 240 GLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMI 299
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
S K G+ + + F + ++ + T S+ V+ +++ L+FG +H +K G
Sbjct: 300 SGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLH 359
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ V +SLV+MY +C + +A+K+F + ++VV WN ++G ++ + +EL+ M
Sbjct: 360 SNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNM 419
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+P+ T+ ++++CA L+ LG +H+ +IKN ++FVG+ALVD YAK L
Sbjct: 420 KSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGAL 479
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSS 352
E A F I N++ VSWN +I+GY + F L + LG P+E + + +L +
Sbjct: 480 EDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSAC 539
Query: 353 LAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ + L Q+HCL ++ G E Y SL+ YAK G I A
Sbjct: 540 ASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAH--------------- 584
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
K+L+ + +VS N +IA A + ++ + LF+ M I
Sbjct: 585 -----------------KILACMPERSVVSMNALIAGYAQI-NLEQAVNLFRDMLVEGIN 626
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
TF SLL AC + L LG +H LI K + D F+ L+ MY +
Sbjct: 627 STEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASV 686
Query: 529 IFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+F+E ++ ++ + WTA+IS L N + AL+ ++EM PD+ ++ L AC
Sbjct: 687 LFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVS 746
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
+++G E + + G + + +VD+ + G +K + ++ M + + W +
Sbjct: 747 SIKDGTETHSLIFHT-GFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSM 805
Query: 648 LEG 650
+ G
Sbjct: 806 IVG 808
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/516 (27%), Positives = 252/516 (48%), Gaps = 47/516 (9%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
IH +K GF + ++ N +V++Y +CA + AE+ FK +E +D+++WN+I+ ++ +
Sbjct: 81 IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSIL-SMHSKQG 139
Query: 223 FGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
F + Y + + V+PN+ TF V++SCA L+ G+ +H V+K E +
Sbjct: 140 FPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEG 199
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRP 340
AL+ YAKC+ L A F + VSW ++I GY P ++ + E+ ++G P
Sbjct: 200 ALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEP 259
Query: 341 NEFTFSHVL---------------------RSSLAFQLL--------------QLHCLII 365
++ F V+ R+ +A+ L+ + +
Sbjct: 260 DQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMR 319
Query: 366 RMGYENYEYVLGSLMTSYAKS-----GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
+ G ++ LGS++++ A GL+ A A L+ V + + +Y + G+
Sbjct: 320 KAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLH--SNVYVGSSLVSMYAKCGK 377
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
K+ L ++V WN ++ NG EV+ELF M++ YPD++T+ S+LSA
Sbjct: 378 MEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSA 437
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C+ L L LG LH +I K + +S+ FV N L+DMY K G++ + + F + +R+ ++
Sbjct: 438 CACLKYLDLGHQLHSVIIKNK-FASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVS 496
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W +I A FR M LG PD V+L ++L+AC + +G ++ ++
Sbjct: 497 WNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQV-HCLS 555
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
G E ++ ++D+ + G + A KI+ MP
Sbjct: 556 VKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMP 591
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 198/656 (30%), Positives = 354/656 (53%), Gaps = 39/656 (5%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQL 61
DR+VV +N++I+A ++ G+ E+A + M + G + T+ +L +C + + +L
Sbjct: 347 DRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGEL 406
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
S + +D +G +L+ +Y R G L +F MP++ L++WN+I++ + +
Sbjct: 407 IHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARRED 466
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ M L+ ++ V +F+ ++ +N G+ IH ++++G +AN+
Sbjct: 467 RGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANA 526
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+NMY +C I A+ +F+ RD++SWN++I A+ ++ A +L+L M + + P+
Sbjct: 527 LMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPD 586
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ TF V+ C + LG+ IH +I++ L+ DV +G+AL++ Y +C +L+ A+ F
Sbjct: 587 KITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFH 646
Query: 302 EISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
+ ++N++SW A+I G+A + F L ++ G++P + TFS +L++ ++ L
Sbjct: 647 SLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDE 706
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
++ I+ GYE V +L+++Y+KSG ++DA
Sbjct: 707 GKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDAR----------------------- 743
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
K+ ++ DI+SWN +IA A NG L+ M+ + + ++FVS
Sbjct: 744 ---------KVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVS 794
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+L+ACS L G +H I K + + D V LI MY KCGS+ + ++F+ T++
Sbjct: 795 ILNACSSFSALEEGKRVHAEIVKRK-MQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEK 853
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
NV+TW A+I+A +G A +AL+ F M+ G KPD ++L+AC H GLV EG +F
Sbjct: 854 NVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIF 913
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ +G+ P ++HY C+V LL R G +EAE +I MPFPP+A +W T L C+
Sbjct: 914 SSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACR 969
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 184/657 (28%), Positives = 340/657 (51%), Gaps = 43/657 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+V+S+NS+IS Y++ G+ + A ++F M GF P++ T+ +L+ C S +E G
Sbjct: 143 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYG 202
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ + +++ G + D V +LL +YG+ L VF + R+ +V++N+++ ++ +
Sbjct: 203 KKIHSKIIEAG-YQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQ 261
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+VE+C+ LF ++ + + +++ ++ + L+ G++IH L + G + ++ V
Sbjct: 262 KAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRV 321
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+L M+ +C + A++ + RDVV +N +I ALA+ ++ +A E Y +M D V
Sbjct: 322 GTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGV 381
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N+TT++ V+N+C+ + G+ IH+ + + DV +G++L+ YA+C +L A
Sbjct: 382 VMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARE 441
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVL----RSSL 353
F+ + ++++SWNA+I GYA + L + +Q G +P TF H+L SS
Sbjct: 442 LFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSA 501
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+H I+R G ++ ++ +LM Y + G I +A N+ G
Sbjct: 502 YSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEA---------------QNVFEG 546
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
R DI+SWN +IA A +G Y+ +LF M+ + PD T
Sbjct: 547 TRAR-----------------DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKIT 589
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F S+L C L LG +H LI ++ + D + N LI+MY +CGS+ + ++F+ +
Sbjct: 590 FASVLVGCKNPEALELGRQIHMLIIESG-LQLDVNLGNALINMYIRCGSLQDAYEVFHSL 648
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
RNV++WTA+I G ++A E F +M+ GFKP + ++L AC + EG
Sbjct: 649 RHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGK 708
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++ + S G E + + ++ + G + +A K+ MP + + W + G
Sbjct: 709 KVIAHILNS-GYELDTGVGNALISAYSKSGSMTDARKVFDKMP-NRDIMSWNKMIAG 763
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/600 (25%), Positives = 306/600 (51%), Gaps = 41/600 (6%)
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
E ++ A +++ G+ D F+ L+ +Y + + + VF MPR+ +++WNS++S
Sbjct: 99 AEAKRIHAQMVEAGV-GPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISC 157
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ + GF + LF E+ + ++ +++ ++ + +LE+G++IH +I+ G+ +
Sbjct: 158 YAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRD 217
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V NSL+NMY +C + SA ++F + RDVVS+NT++G A+ + + L+ +MS
Sbjct: 218 PRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSS 277
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ + P++ T++ ++++ GK IH + L D+ VG+AL + +C ++ G
Sbjct: 278 EGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAG 337
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLA 354
A +++++V +NALI A F ++ G N T+ VL +
Sbjct: 338 AKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACST 397
Query: 355 FQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ L +H I +G+ + + SL++ YA+ G ++PRA
Sbjct: 398 SKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCG------------DLPRA------ 439
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+L + + + D++SWN +IA A D E ++L+K M++ + P
Sbjct: 440 --------------RELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPG 485
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF+ LLSAC+ + G +H I ++ I S+ + N L++MY +CGSI + +F
Sbjct: 486 RVTFLHLLSACTNSSAYSDGKMIHEDILRSG-IKSNGHLANALMNMYRRCGSIMEAQNVF 544
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
R++I+W ++I+ +G + A + F EM+ G +PD++ +VL C++ +
Sbjct: 545 EGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALE 604
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G ++ + S G++ +++ + ++++ +R G L++A ++ ++ N + W + G
Sbjct: 605 LGRQIHMLIIES-GLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRH-RNVMSWTAMIGG 662
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 247/493 (50%), Gaps = 31/493 (6%)
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
+++V ++ + ++ L ++IH +++ G ++ ++N L+NMY +C + A ++F
Sbjct: 81 NRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVF 140
Query: 200 KDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
+ RDV+SWN++I A+ KA +L+ M P++ T++ ++ +C
Sbjct: 141 LKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELE 200
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
GK IH+K+I+ + D V ++L++ Y KC++L A FS I +++VS+N ++ YA
Sbjct: 201 YGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYA 260
Query: 320 SKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS 378
K+ I L ++ G P++ T+ ++L + +L I ++
Sbjct: 261 QKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLA---------- 310
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
GL SD + TAL A ++ R G + L D+V
Sbjct: 311 -----VNEGLNSD-IRVGTAL------------ATMFVRCGDVAGAKQALEAFADRDVVV 352
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
+N +IAA A +G Y+E E + MR+ + + T++S+L+ACS L G +H I
Sbjct: 353 YNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHIS 412
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
+ SSD + N LI MY +CG + + ++FN M R++I+W A+I+ A+
Sbjct: 413 EVG-HSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAM 471
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDL 618
+ +++M+ G KP RV + +L+AC + +G + E + RS G++ + ++++
Sbjct: 472 KLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS-GIKSNGHLANALMNM 530
Query: 619 LVRYGHLKEAEKI 631
R G + EA+ +
Sbjct: 531 YRRCGSIMEAQNV 543
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 194/418 (46%), Gaps = 40/418 (9%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N+ +V ++ +C ++ K IHA++++ + D+F+ + L++ Y KC ++ AH F
Sbjct: 81 NRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVF 140
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ 359
++ ++++SWN+LI YA + F L E +Q G+ P++ T+ +L + + L+
Sbjct: 141 LKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELE 200
Query: 360 ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+H II GY+ V SL+ Y K ++P A + +GIY
Sbjct: 201 YGKKIHSKIIEAGYQRDPRVQNSLLNMYGK------------CEDLPSA---RQVFSGIY 245
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
R D+VS+N ++ A +E + LF M + I PD T++
Sbjct: 246 RR-----------------DVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYI 288
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
+LL A + L G +H L E ++SD V L M+ +CG + + + D
Sbjct: 289 NLLDAFTTPSMLDEGKRIHKLA-VNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFAD 347
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
R+V+ + ALI+AL +G + A E++ +M G +R ++VL AC + G EL
Sbjct: 348 RDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAG-EL 406
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
G ++ + ++ + R G L A ++ TMP + + W + G R
Sbjct: 407 IHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMP-KRDLISWNAIIAGYAR 463
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 111/220 (50%), Gaps = 5/220 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
MP+R+++S+N +I+ Y++ G AL+ M +G +F+F +L +C S + + EG
Sbjct: 749 MPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEG 808
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ A ++K + D VG AL+ +Y + G L+E VF++ K++VTWN++++ + +
Sbjct: 809 KRVHAEIVKRKM-QGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQ 867
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI-HGLVIKNGFDYELL 177
HG + F + + + S+F ++ ++ + G +I L ++G +
Sbjct: 868 HGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIE 927
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEI-RDVVSWNTIIGA 216
LV + + AE + + D W T++GA
Sbjct: 928 HYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGA 967
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 209/661 (31%), Positives = 350/661 (52%), Gaps = 41/661 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPVE-G 58
+P+ NVV++N +IS +++ G+ E+A+ FL + G + T+ + G +LS SL+ + G
Sbjct: 269 IPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYG 328
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + A K GL + +VG+AL+ +Y + +D VF + +++V WN+++ F +
Sbjct: 329 SMVHAQATKEGLD-DNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQ 387
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G ++ M F + R E +F + ++ L FG Q+H ++IKN F L V
Sbjct: 388 NGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFV 447
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN+LV+MY + + A K F+ ++I D VSWN II + E +A ++ RM + V
Sbjct: 448 ANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGV 507
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ + ++++CA +Q G+ H ++K L+ GS+L+D Y KC + A
Sbjct: 508 LPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARD 567
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQL 357
F + ++N+VS NALI GY +I L E+ +G +P E TF+ +L AF L
Sbjct: 568 VFYSMPSRNVVSVNALIAGYTMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFML 627
Query: 358 ---LQLHCLIIRMGY-ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q+H +++ G+ + E V SL+ Y S D+ + L P+
Sbjct: 628 NLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKG--------- 678
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+V W +I+ A +++ L+ +++MR+ I PD
Sbjct: 679 ----------------------LVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAA 716
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F S+L AC+ + +L G +H LI T + D C+ LIDMY KCG + S+++F EM
Sbjct: 717 FASVLRACAGMSSLQNGQEIHSLIFHTG-FNMDEVTCSSLIDMYAKCGDVKGSLQVFREM 775
Query: 534 TDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
R NVI+W ++I L NG+A+ ALE F++ME PD V + VL+AC H G V EG
Sbjct: 776 PRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEG 835
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++F+ M +Y ++P +DH C+VD+L R+G L EAE+ I + + ++W T L C+
Sbjct: 836 RKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACR 895
Query: 653 R 653
+
Sbjct: 896 K 896
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 183/725 (25%), Positives = 316/725 (43%), Gaps = 111/725 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+ ++V ++NS++S Y G ++ F+ M N P +FTF +LS C L V G
Sbjct: 102 LEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFG 161
Query: 59 AQLQASVLKNGL----FCA--------------------------DAFVGTALLGLYGRH 88
Q+ V K G FC D TAL+ Y R
Sbjct: 162 RQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRD 221
Query: 89 GCLDEVVSVFEDM-----------------------------------PRKSLVTWNSIV 113
G E V VF+ M P ++V WN ++
Sbjct: 222 GFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMI 281
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
S K GF E+ + F EL ++ + T SS V+ +++ L +G +H K G D
Sbjct: 282 SGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLD 341
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ V ++LVNMY +C+ + +A+++F + R++V WN ++G A++ + +E + M
Sbjct: 342 DNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCM 401
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
P++ TF + ++CA L G +H +IKN ++FV +ALVD YAK L
Sbjct: 402 KRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGAL 461
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
+ A F + + VSWNA+I+GY + + + F+ ++ G P+E + + ++ +
Sbjct: 462 KEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSAC 521
Query: 353 LAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
Q L Q HCL++++G + SL+ Y K G++ +
Sbjct: 522 ANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVV---------------LAAR 566
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
++ + +R ++VS N +IA G +E + LF+ ++ +
Sbjct: 567 DVFYSMPSR-----------------NVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLK 608
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P TF LL C L LG +HG + K +SS VC L+ +Y S
Sbjct: 609 PTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSET 668
Query: 529 IFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+F+E+ + ++ WTALIS ++AL+ ++ M PD+ A +VL AC
Sbjct: 669 LFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMS 728
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHC--VVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
++ G E+ + + MD C ++D+ + G +K + ++ MP N + W
Sbjct: 729 SLQNGQEIHSLI---FHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWN 785
Query: 646 TFLEG 650
+ + G
Sbjct: 786 SMIVG 790
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/522 (26%), Positives = 241/522 (46%), Gaps = 43/522 (8%)
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
Q L + IH +K G + L+ N +V++Y +C + A+K F +E +DV +WN+++
Sbjct: 55 QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
+ F ++ ++ M V PN+ TF V+++C+GLQ+ G+ +H V K
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
F L+D YAKC L A L F N + VSW ALI GY P + + +
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234
Query: 335 Q-LGYRPNEFTFSHVLRSSLAF-QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
Q +G+ P++ T V+ + +A +L L ++ N +++ +AK G +A
Sbjct: 235 QRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNV-VAWNVMISGHAKRGFAEEA 293
Query: 393 LAFV-----TALNIPRA---------------------------------VVPANIIAGI 414
++F T L R+ V + + +
Sbjct: 294 ISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNM 353
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y + + + ++ + L +IV WN ++ A NG +EV+E F M+ PD +TF
Sbjct: 354 YAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTF 413
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S+ SAC+ L L G LH ++ K + +S+ FV N L+DMY K G++ + K F M
Sbjct: 414 TSIFSACASLHYLNFGGQLHTVMIKNK-FASNLFVANALVDMYAKSGALKEARKQFELMK 472
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+ ++W A+I + A FR M G PD V+L ++++AC + ++ G +
Sbjct: 473 IHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQ 532
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+ + G++ ++D+ V+ G + A + +MP
Sbjct: 533 CHCLLVK-VGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMP 573
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 202/436 (46%), Gaps = 44/436 (10%)
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
LQ K IH+K +K + +G+ +VD Y KC N++ A FS + K++ +WN++
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 315 ILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGY 369
+ Y T + + + RPNEFTF+ VL + Q + Q+HC + + G+
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173
Query: 370 ENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIAG------------IYN 416
+ G L+ YAK + DA L F ALN+ A +IAG +++
Sbjct: 174 GFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTA-LIAGYVRDGFPMEAVKVFD 232
Query: 417 RT----------------------GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
R G+ + KL +Q+ P++V+WN++I+ A G +E
Sbjct: 233 RMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEE 292
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
+ F ++ + + S+LSA + L L GS +H K E + + +V + L+
Sbjct: 293 AISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATK-EGLDDNVYVGSALV 351
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
+MY KC + ++ ++FN + +RN++ W A++ NG AQ +E F M+ G +PD
Sbjct: 352 NMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEF 411
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
++ +AC + G +L M ++ + + +VD+ + G LKEA K
Sbjct: 412 TFTSIFSACASLHYLNFGGQLHTVMIKNK-FASNLFVANALVDMYAKSGALKEARKQFEL 470
Query: 635 MPFPPNALIWRTFLEG 650
M N + W + G
Sbjct: 471 MKIHDN-VSWNAIIVG 485
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 211/660 (31%), Positives = 346/660 (52%), Gaps = 43/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMF-LYMINRGFEPTQFTFGGLL-SCDSL-NPVE 57
MP RN+V+++S++S Y++ GY +AL +F +M + +P ++ ++ +C L N +
Sbjct: 113 MPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQ 172
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
QL V+K G F D +VGT+L+ Y + G +DE +F+ + K+ VTW +I++ +
Sbjct: 173 ALQLHGFVVKGG-FVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYA 231
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
K G E + LF ++ +V V+ S + LE G+QIHG V++ GFD ++
Sbjct: 232 KLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVS 291
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N +++ Y +C + + K+F + +DVVSW T+I ++ G A++L++ M
Sbjct: 292 VVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKG 351
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P+ V+NSC LQ G+ +HA IK ++ D FV + L+D YAKCD+L A
Sbjct: 352 WKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNAR 411
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEF-TF----SHVLRSS 352
F ++ N+VS+NA+I GY+ + L ++L P TF
Sbjct: 412 KVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLF 471
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L Q+HCLII+ G + +L+ Y+K + DA +
Sbjct: 472 LLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARL---------------VFE 516
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
IY+R DIV WN + + + + +E L+L+K ++ +R+ P+ +
Sbjct: 517 EIYDR-----------------DIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEF 559
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF ++++A S + +L G H + K + D FV N L+DMY KCGSI S K F+
Sbjct: 560 TFAAVIAAASNIASLRHGQQFHNQVIKMGL-DDDPFVTNSLVDMYAKCGSIEESHKAFSS 618
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
R++ W ++IS +G A +ALE F M G KP+ V + +L+AC H GL+ G
Sbjct: 619 TNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLG 678
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
FE M++ +G+EP +DHY C+V LL R G + EA++ + MP P A++WR+ L C+
Sbjct: 679 FHHFESMSK-FGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACR 737
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 160/600 (26%), Positives = 298/600 (49%), Gaps = 43/600 (7%)
Query: 44 FGGLLSCDSLNPVEG---AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFED 100
G LL S N + ++ A ++ G D F+ LL Y + + +F+
Sbjct: 53 LGKLLQLPSPNILTSHYYKKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDT 112
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEF 159
MP ++LVTW+S+VS++ +HG+ + + LFC +RS E V+ + +L
Sbjct: 113 MPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQ 172
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
Q+HG V+K GF ++ V SL++ Y + + A +F ++++ V+W II A+
Sbjct: 173 ALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAK 232
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+L+L+ +M V+P++ V+++C+ L+ GK IH V++ + DV V
Sbjct: 233 LGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSV 292
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGY 338
+ ++DFY KC ++ F+ + +K++VSW +I G S ++ L +E+++ G+
Sbjct: 293 VNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGW 352
Query: 339 RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
+P+ F + VL S + Q L Q+H I++ +N ++V L+ YAK +++A
Sbjct: 353 KPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNA-- 410
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
R V +++A I ++VS+N +I + E
Sbjct: 411 --------RKVF--DLVAAI--------------------NVVSYNAMIEGYSRQDKLVE 440
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
L+LF+ MR + P TFVSLL S L L L S +H LI K +S D+F + LI
Sbjct: 441 ALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFG-VSLDSFAGSALI 499
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
D+Y KC +G + +F E+ DR+++ W A+ S + +L+ +++++ KP+
Sbjct: 500 DVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEF 559
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
AV+ A + +R G + ++ + G++ + + +VD+ + G ++E+ K ++
Sbjct: 560 TFAAVIAAASNIASLRHGQQFHNQVIK-MGLDDDPFVTNSLVDMYAKCGSIEESHKAFSS 618
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF-REM 564
D F+ N L+ Y K + K+F+ M RN++TW++++S +G++ AL F R M
Sbjct: 86 DVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFM 145
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY--HCVVDLLVRY 622
KP+ L +V+ AC G + + ++L + + V+ D Y ++D +
Sbjct: 146 RSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQ---DVYVGTSLIDFYAKR 202
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEG 650
G++ EA I + + W + G
Sbjct: 203 GYVDEARLIFDGLKV-KTTVTWTAIIAG 229
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 200/653 (30%), Positives = 350/653 (53%), Gaps = 33/653 (5%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
+R V S+N+++ Y + GY+E+AL++ M G + T LLS C S + +E G +
Sbjct: 206 ERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGRE 265
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ +K L D V +L +Y + G + E VF+ M KS+V+W I+ + G
Sbjct: 266 IHVEAMKARLLF-DVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCG 324
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
E +F ++ + V +++ V++ S L++G+ +H ++ G + +L V
Sbjct: 325 HSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGT 384
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+LV MY +C ++F+ + RD+++WNT+IG LAE N+ +A E+Y +M + + P
Sbjct: 385 ALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMP 444
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N+ T+V ++N+C G+ IH++V+K+ D+ V +AL+ YA+C +++ A L F
Sbjct: 445 NKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLF 504
Query: 301 SEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
+++ K+I+SW A+I G A ++ + ++ Q G +PN T++ +L + + L
Sbjct: 505 NKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALD 564
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
G ++ V+ ++GL +DA AN + +Y+ G
Sbjct: 565 W-------GRRIHQQVI--------EAGLATDAHV-------------ANTLVNMYSMCG 596
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+ ++ ++ + DIV++N +I A + KE L+LF ++ + PD T++++L+
Sbjct: 597 SVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLN 656
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
AC+ +L +H L+ K +S DT + N L+ Y KCGS ++ +F++M RNVI
Sbjct: 657 ACANSGSLEWAKEIHSLVLKDGYLS-DTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVI 715
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W A+I +G Q L+ F M+ G KPD V +++L+AC H GL+ EG F M
Sbjct: 716 SWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSM 775
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+R +G+ P ++HY C+VDLL R G L E E +I TMPF N IW L C+
Sbjct: 776 SRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACR 828
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 164/593 (27%), Positives = 295/593 (49%), Gaps = 51/593 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
M ++VVS+ II Y+ CG+ E A +F M G P + T+ +L+ S P
Sbjct: 305 METKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFS-GPAALKW 363
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + + +L G +D VGTAL+ +Y + G + VFE + + L+ WN+++
Sbjct: 364 GKTVHSHILNAG-HESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 422
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G E+ ++ ++ R + + ++V +++ N L +G +IH V+K+GF +++
Sbjct: 423 EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS 482
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+L++MY +C I A +F + +D++SW +IG LA+S +AL ++ M
Sbjct: 483 VQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAG 542
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ PN+ T+ ++N+C+ G+ IH +VI+ L D V + LV+ Y+ C +++ A
Sbjct: 543 LKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDAR 602
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQ 356
F ++ ++IV++NA+I GYA+ + L + LQ G +P++ T+ ++L +
Sbjct: 603 QVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSG 662
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L ++H L+++ GY + + +L+++YAK G SDAL
Sbjct: 663 SLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALL------------------ 704
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+ ++ + +++SWN +I CA +G ++VL+LF+ M+ I PD
Sbjct: 705 --------------VFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIV 750
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TFVSLLSACS L G + + I+ ++D+ G+ G + +
Sbjct: 751 TFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKT 810
Query: 533 MT-DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFKPDRVALIAVLT 581
M N W AL+ A ++G A+RA E L PD A+ L+
Sbjct: 811 MPFQANTRIWGALLGACRIHGNVPVAERAAE-----SSLKLDPDNAAVYVALS 858
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 236/488 (48%), Gaps = 41/488 (8%)
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI--RDVVSWNT 212
+DL G ++H +I++ + N+L+NMY QC I A +++ + R V SWN
Sbjct: 155 KDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNA 214
Query: 213 IIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
++ + +AL+L M + + T + +++SC G+ IH + +K
Sbjct: 215 MVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKAR 274
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLI 331
L DV V + +++ YAKC ++ A F ++ K++VSW +I GYA S + +
Sbjct: 275 LLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQ 334
Query: 332 ELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSG 387
++ Q G PN T+ +VL + L+ +H I+ G+E
Sbjct: 335 KMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHE----------------- 377
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
SD LA TAL +Y + G Y + ++ +L D+++WN +I A
Sbjct: 378 --SD-LAVGTAL------------VKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 422
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
G+++E E++ M+ + P+ T+V LL+AC L G +H + K + D
Sbjct: 423 EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFM-FDI 481
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
V N LI MY +CGSI + +FN+M +++I+WTA+I L +G AL F++M+
Sbjct: 482 SVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQA 541
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G KP+RV ++L AC + G + +++ + G+ + + +V++ G +K+
Sbjct: 542 GLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEA-GLATDAHVANTLVNMYSMCGSVKD 600
Query: 628 AEKIITTM 635
A ++ M
Sbjct: 601 ARQVFDRM 608
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 192/413 (46%), Gaps = 34/413 (8%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N ++ ++ C +++ + G+ +H +I++ D + +AL++ Y +C ++E A +
Sbjct: 140 NSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVW 199
Query: 301 SEISN--KNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
+++++ + + SWNA+++GY ++ LL E+ Q G T +L S +
Sbjct: 200 NKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSA 259
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
L+ G E + K+ L+ D V AN I +Y +
Sbjct: 260 LEC-------GRE--------IHVEAMKARLLFD-------------VNVANCILNMYAK 291
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G +E ++ ++E +VSW I+I A G + E+F+ M+ + P+ T++++
Sbjct: 292 CGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINV 351
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L+A S L G ++H I SD V L+ MY KCGS ++F ++ +R+
Sbjct: 352 LNAFSGPAALKWGKTVHSHILNAG-HESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRD 410
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+I W +I L G + A E + +M+ G P+++ + +L AC + + G E+
Sbjct: 411 LIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHS 470
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
R+ + G ++ + ++ + R G +K+A + M + + W + G
Sbjct: 471 RVVKD-GFMFDISVQNALISMYARCGSIKDARLLFNKM-VRKDIISWTAMIGG 521
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 199/653 (30%), Positives = 345/653 (52%), Gaps = 33/653 (5%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
+R V S+N+++ Y + GY+E AL++ M G P + T LS C S +E G +
Sbjct: 88 ERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGRE 147
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ ++ GL D V +L +Y + G ++E VF+ M +KS+V+W + + G
Sbjct: 148 IHFQAMQAGLLF-DVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCG 206
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
E +F ++ + V +++ V++ S+ L++G+ +H ++ G + + V
Sbjct: 207 RSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGT 266
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+LV MY +C ++F+ + RD+++WNT+IG LAE + +A E+Y +M + V P
Sbjct: 267 ALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMP 326
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N+ T+V ++N+C GK IH++V K D+ V +AL+ Y++C +++ A L F
Sbjct: 327 NKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVF 386
Query: 301 SEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
++ K+++SW A+I G A ++ + E+ Q G PN T++ +L + + L+
Sbjct: 387 DKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALE 446
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
G ++ V+ ++GL +DA N + +Y+ G
Sbjct: 447 W-------GRRIHQQVV--------EAGLATDAHV-------------GNTLVNMYSMCG 478
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+ ++ ++ + DIV++N +I A + KE L+LF ++ + PD T++++L+
Sbjct: 479 SVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLN 538
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
AC+ +L +H L++K S DT V N L+ Y KCGS + +F +MT RNVI
Sbjct: 539 ACANSGSLEWAREIHTLVRKGGFFS-DTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVI 597
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W A+I +G Q AL+ F M+ G KPD V +++L+AC H GL+ EG F M
Sbjct: 598 SWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSM 657
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++ + + P ++HY C+VDLL R G L EAE +I TMPF N IW L C+
Sbjct: 658 SQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACR 710
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/574 (28%), Positives = 289/574 (50%), Gaps = 52/574 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
M ++VVS+ I Y+ CG E A +F M G P + T+ +L+ S +P
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFS-SPAALKW 245
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + + +L G +D VGTAL+ +Y + G + VFE + + L+ WN+++
Sbjct: 246 GKAVHSRILNAG-HESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 304
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G+ E+ ++ ++ R V + ++V +++ N L +G++IH V K GF ++
Sbjct: 305 EGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIG 364
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+L++MY +C I A +F + +DV+SW +IG LA+S +AL +Y M
Sbjct: 365 VQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAG 424
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN+ T+ ++N+C+ G+ IH +V++ L D VG+ LV+ Y+ C +++ A
Sbjct: 425 VEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDAR 484
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRS----- 351
F + ++IV++NA+I GYA+ + L + LQ G +P++ T+ ++L +
Sbjct: 485 QVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSG 544
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
SL + ++H L+ + G+ + V +L+++YAK G SDA
Sbjct: 545 SLEW-AREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASI----------------- 586
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+ ++ + +++SWN +I A +G ++ L+LF+ M+ + PD
Sbjct: 587 ---------------VFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDI 631
Query: 472 YTFVSLLSACSKLCNLALGSSLH-GLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKI 529
TFVSLLSACS L G + + II + + + C ++D+ G+ G + + +
Sbjct: 632 VTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGC--MVDLLGRAGQLDEAEAL 689
Query: 530 FNEMT-DRNVITWTALISALGLNG---FAQRALE 559
M N W AL+ A ++G A+RA E
Sbjct: 690 IKTMPFQANTRIWGALLGACRIHGNVPVAERAAE 723
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 240/488 (49%), Gaps = 41/488 (8%)
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI--RDVVSWNT 212
+DL G Q+H +I++ + N+L+NMY QC I A +++K + R V SWN
Sbjct: 37 KDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNA 96
Query: 213 IIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
++ + KAL+L +M + P++TT + ++SC G+ IH + ++
Sbjct: 97 MVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAG 156
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLI 331
L DV V + +++ YAKC ++E A F ++ K++VSW I GYA S T+ +
Sbjct: 157 LLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQ 216
Query: 332 ELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSG 387
++ Q G PN T+ VL + + L+ +H I+ G+E+ V +L+ YAK
Sbjct: 217 KMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAK-- 274
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
G Y + ++ +L D+++WN +I A
Sbjct: 275 ------------------------------CGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 304
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
G ++E E++ M+ + P+ T+V LL+AC L G +H + K +SD
Sbjct: 305 EGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAG-FTSDI 363
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
V N LI MY +CGSI + +F++M ++VI+WTA+I L +GF AL ++EM+
Sbjct: 364 GVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQA 423
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G +P+RV ++L AC + G + +++ + G+ + + +V++ G +K+
Sbjct: 424 GVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEA-GLATDAHVGNTLVNMYSMCGSVKD 482
Query: 628 AEKIITTM 635
A ++ M
Sbjct: 483 ARQVFDRM 490
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 195/413 (47%), Gaps = 34/413 (8%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N + ++ ++ C +++ + G+ +H +I++ D + +AL++ Y +C ++E A +
Sbjct: 22 NSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVW 81
Query: 301 SEIS--NKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
++S + + SWNA+++GY ++ LL ++ Q G P+ T L S +
Sbjct: 82 KKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGA 141
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
L+ G E + + ++GL+ D V AN I +Y +
Sbjct: 142 LEW-------GREIHFQAM--------QAGLLFD-------------VKVANCILNMYAK 173
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G E ++ ++E+ +VSW I I A G + E+F+ M + P+ T++S+
Sbjct: 174 CGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISV 233
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L+A S L G ++H I SDT V L+ MY KCGS ++F ++ +R+
Sbjct: 234 LNAFSSPAALKWGKAVHSRILNAG-HESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRD 292
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+I W +I L G+ + A E + +M+ G P+++ + +L AC + + G E+
Sbjct: 293 LIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHS 352
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
R+ ++ G ++ + ++ + R G +K+A + M + + W + G
Sbjct: 353 RVAKA-GFTSDIGVQNALISMYSRCGSIKDARLVFDKM-VRKDVISWTAMIGG 403
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 209/661 (31%), Positives = 349/661 (52%), Gaps = 41/661 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPVE-G 58
+P+ NVV++N +IS +++ G+ E+A+ FL + G + T+ + G +LS SL+ + G
Sbjct: 269 IPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYG 328
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + A K GL + +VG+AL+ +Y + +D VF + +++V WN+++ F +
Sbjct: 329 SMVHAQATKEGL-DDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQ 387
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G ++ M F + R E +F + ++ L FG Q+H ++IKN F L V
Sbjct: 388 NGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFV 447
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN+LV+MY + + A K F+ ++I D VSWN II + E +A ++ RM + V
Sbjct: 448 ANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGV 507
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ + ++++CA +Q G+ H ++K L+ GS+L+D Y KC + A
Sbjct: 508 LPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARD 567
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQL 357
F + ++N+VS NALI GY +I L E+ +G +P E TF+ +L AF L
Sbjct: 568 VFYSMPSRNVVSVNALIAGYTMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFML 627
Query: 358 ---LQLHCLIIRMGY-ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q+H +++ G+ + E V SL+ Y S D+ + L P+
Sbjct: 628 NLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKG--------- 678
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+V W +I+ A +++ L+ +++MR+ I PD
Sbjct: 679 ----------------------LVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAA 716
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F S+L AC+ + +L G +H LI T + D C+ LIDMY KCG + S+++F EM
Sbjct: 717 FASVLRACAGMSSLQNGQEIHSLIFHTG-FNMDEVTCSSLIDMYAKCGDVKGSLQVFREM 775
Query: 534 TDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
R NVI+W ++I L NG+A+ ALE F++ME PD V + VL+AC H G V EG
Sbjct: 776 PRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEG 835
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++F+ M +Y + P +DH C+VD+L R+G L EAE+ I + + ++W T L C+
Sbjct: 836 RKVFDLMVNNYKLLPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACR 895
Query: 653 R 653
+
Sbjct: 896 K 896
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 183/728 (25%), Positives = 317/728 (43%), Gaps = 111/728 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+ ++V ++NS++S Y G ++ F+ M N P +FTF +LS C L V G
Sbjct: 102 LEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFG 161
Query: 59 AQLQASVLKNGL----FCA--------------------------DAFVGTALLGLYGRH 88
Q+ V K G FC D TAL+ Y R
Sbjct: 162 RQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRD 221
Query: 89 GCLDEVVSVFEDM-----------------------------------PRKSLVTWNSIV 113
G E V VF+ M P ++V WN ++
Sbjct: 222 GFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMI 281
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
S K GF E+ + F EL ++ + T SS V+ +++ L +G +H K G D
Sbjct: 282 SGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLD 341
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ V ++LVNMY +C+ + +A+++F + R++V WN ++G A++ + +E + M
Sbjct: 342 DNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCM 401
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
P++ TF + ++CA L G +H +IKN ++FV +ALVD YAK L
Sbjct: 402 KRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGAL 461
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
+ A F + + VSWNA+I+GY + + + F+ ++ G P+E + + ++ +
Sbjct: 462 KEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSAC 521
Query: 353 LAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
Q L Q HCL++++G + SL+ Y K G++ +
Sbjct: 522 ANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVV---------------LAAR 566
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
++ + +R ++VS N +IA G +E + LF+ ++ +
Sbjct: 567 DVFYSMPSR-----------------NVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLK 608
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P TF LL C L LG +HG + K +SS VC L+ +Y S
Sbjct: 609 PTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSET 668
Query: 529 IFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+F+E+ + ++ WTALIS ++AL+ ++ M PD+ A +VL AC
Sbjct: 669 LFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMS 728
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHC--VVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
++ G E+ + + MD C ++D+ + G +K + ++ MP N + W
Sbjct: 729 SLQNGQEIHSLI---FHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWN 785
Query: 646 TFLEGCQR 653
+ + G +
Sbjct: 786 SMIVGLAK 793
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/522 (26%), Positives = 241/522 (46%), Gaps = 43/522 (8%)
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
Q L + IH +K G + L+ N +V++Y +C + A+K F +E +DV +WN+++
Sbjct: 55 QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
+ F ++ ++ M V PN+ TF V+++C+GLQ+ G+ +H V K
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
F L+D YAKC L A L F N + VSW ALI GY P + + +
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234
Query: 335 Q-LGYRPNEFTFSHVLRSSLAF-QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
Q +G+ P++ T V+ + +A +L L ++ N +++ +AK G +A
Sbjct: 235 QRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNV-VAWNVMISGHAKRGFAEEA 293
Query: 393 LAFV-----TALNIPRA---------------------------------VVPANIIAGI 414
++F T L R+ V + + +
Sbjct: 294 ISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNM 353
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y + + + ++ + L +IV WN ++ A NG +EV+E F M+ PD +TF
Sbjct: 354 YAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTF 413
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S+ SAC+ L L G LH ++ K + +S+ FV N L+DMY K G++ + K F M
Sbjct: 414 TSIFSACASLHYLNFGGQLHTVMIKNK-FASNLFVANALVDMYAKSGALKEARKQFELMK 472
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+ ++W A+I + A FR M G PD V+L ++++AC + ++ G +
Sbjct: 473 IHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQ 532
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+ + G++ ++D+ V+ G + A + +MP
Sbjct: 533 CHCLLVK-VGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMP 573
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 202/436 (46%), Gaps = 44/436 (10%)
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
LQ K IH+K +K + +G+ +VD Y KC N++ A FS + K++ +WN++
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 315 ILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGY 369
+ Y T + + + RPNEFTF+ VL + Q + Q+HC + + G+
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173
Query: 370 ENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIAG------------IYN 416
+ G L+ YAK + DA L F ALN+ A +IAG +++
Sbjct: 174 GFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTA-LIAGYVRDGFPMEAVKVFD 232
Query: 417 RT----------------------GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
R G+ + KL +Q+ P++V+WN++I+ A G +E
Sbjct: 233 RMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEE 292
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
+ F ++ + + S+LSA + L L GS +H K E + + +V + L+
Sbjct: 293 AISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATK-EGLDDNVYVGSALV 351
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
+MY KC + ++ ++FN + +RN++ W A++ NG AQ +E F M+ G +PD
Sbjct: 352 NMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEF 411
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
++ +AC + G +L M ++ + + +VD+ + G LKEA K
Sbjct: 412 TFTSIFSACASLHYLNFGGQLHTVMIKNK-FASNLFVANALVDMYAKSGALKEARKQFEL 470
Query: 635 MPFPPNALIWRTFLEG 650
M N + W + G
Sbjct: 471 MKIHDN-VSWNAIIVG 485
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 208/659 (31%), Positives = 344/659 (52%), Gaps = 45/659 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GA 59
P NV +NSII A + G AL + M + +P FTF ++ SC + +E G
Sbjct: 82 PTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGC 141
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ ++ G F +D ++G AL+ +Y R LD VFE+M + V+WNS++S + +
Sbjct: 142 IVHEHAMEMG-FESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSN 200
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
GF ED + ++ + + + + V+ + ++ G +HG++ K G ++++
Sbjct: 201 GFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIG 260
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L++MYF+ + A ++F + ++D V+WNT+I A+ +++L++ M +D
Sbjct: 261 NGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFV 319
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ + I +C + +GK +H +I + ECD + L+D YAKC +L A
Sbjct: 320 PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEV 379
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
F K+ V+WN+LI GY +++++ +P+ TF VL S+ QL
Sbjct: 380 FDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTF--VLLLSIFSQLAD 437
Query: 360 L------HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ HC +I+ G+E E ++G N +
Sbjct: 438 INQGRGIHCDVIKFGFEA-ELIIG-------------------------------NSLLD 465
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y + G+ ++ +K+ S + DI+SWN VIA+ H D ++ MR + PD T
Sbjct: 466 VYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEAT 525
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+ +L CS L G +HG I K+ S+ + N LI+MY KCGS+ + +K+F M
Sbjct: 526 VLGILPMCSLLAVRRQGKEIHGYIFKSGF-ESNVPIGNALIEMYSKCGSLENCIKVFKYM 584
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+++V+TWTALISA G+ G ++AL+ F++ME G PD VA IA + AC H G+V+EG+
Sbjct: 585 KEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGL 644
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+RM Y +EP M+HY CVVDLL R G L +AE+ I +MP P+A +W L C+
Sbjct: 645 RFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACR 703
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 160/575 (27%), Positives = 275/575 (47%), Gaps = 46/575 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGG-LLSCDSLNPV-EG 58
M +R+ VS+NS+IS Y G+ EDAL M+ G P FT LL+C SL V EG
Sbjct: 182 MSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEG 241
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + K G+ D +G LL +Y + L E VF M K VTWN+++ + +
Sbjct: 242 VAVHGVIEKIGI-AGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQ 300
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E + LF +++ V S I DL+ G+ +H +I +GF+ + +
Sbjct: 301 LGRHEASVKLFMDMIDGFVP-DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVA 359
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N L++MY +C + +A+++F + +D V+WN++I +S + + LE + M ++
Sbjct: 360 CNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERK 419
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ TFV +++ + L + G+ IH VIK E ++ +G++L+D YAKC ++
Sbjct: 420 -PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLK 478
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLR--SSLAF 355
FS +S +I+SWN +I T F +I E+ G P+E T +L S LA
Sbjct: 479 VFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAV 538
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+ R G E + Y+ KSG S N+P N + +Y
Sbjct: 539 R---------RQGKEIHGYIF--------KSGFES---------NVP----IGNALIEMY 568
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
++ G +K+ ++ D+V+W +I+A G+ K+ L+ F+ M + + PD+ F+
Sbjct: 569 SKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFI 628
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+ + ACS + G +K + + + C ++D+ + G + + + M
Sbjct: 629 AFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYAC--VVDLLARSGLLAQAEEFILSM 686
Query: 534 TDR-NVITWTALISALGLNG---FAQRALEKFREM 564
+ + W AL+SA G AQR +K E+
Sbjct: 687 PMKPDASLWGALLSACRARGNTNIAQRVSKKILEL 721
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 246/504 (48%), Gaps = 35/504 (6%)
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE-IR 205
++ LS+ ++ +H L+I +G ++ + L++ Y Q S+ +F+ +
Sbjct: 25 LLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTN 84
Query: 206 DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
+V WN+II AL + F +AL Y M + P+ TF VINSCA + + LG +H
Sbjct: 85 NVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVH 144
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT 325
++ E D+++G+AL+D Y++ +L+ A F E+SN++ VSWN+LI GY S
Sbjct: 145 EHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWE 204
Query: 326 SIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
+ ++ G P+ FT S VL L C GSLM
Sbjct: 205 DALDMYHKFRMTGMVPDCFTMSSVL----------LAC--------------GSLMA--V 238
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
K G+ + + + I V+ N + +Y + + E ++ S++ D V+WN +I
Sbjct: 239 KEGVAVHGV--IEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMIC 296
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
A G ++ ++LF M + PD + S + AC + +L +G +H + +
Sbjct: 297 GYAQLGRHEASVKLFMDMIDGFV-PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSG-FE 354
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
DT CN+LIDMY KCG + ++ ++F+ ++ +TW +LI+ +G+ + LE F+ M
Sbjct: 355 CDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMM 414
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
+ + KPD V + +L+ + +G + + + +G E E+ + ++D+ + G
Sbjct: 415 K-MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIK-FGFEAELIIGNSLLDVYAKCGE 472
Query: 625 LKEAEKIITTMPFPPNALIWRTFL 648
+ + K+ + M + + W T +
Sbjct: 473 MDDLLKVFSYMS-AHDIISWNTVI 495
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 358 bits (920), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 208/659 (31%), Positives = 344/659 (52%), Gaps = 45/659 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GA 59
P NV +NSII A + G AL + M + +P FTF ++ SC + +E G
Sbjct: 82 PTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGC 141
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ ++ G F +D ++G AL+ +Y R LD VFE+M + V+WNS++S + +
Sbjct: 142 IVHEHAMEMG-FESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSN 200
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
GF ED + ++ + + + + V+ + ++ G +HG++ K G ++++
Sbjct: 201 GFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIG 260
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L++MYF+ + A ++F + ++D V+WNT+I A+ +++L++ M +D
Sbjct: 261 NGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFV 319
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ + I +C + +GK +H +I + ECD + L+D YAKC +L A
Sbjct: 320 PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEV 379
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
F K+ V+WN+LI GY +++++ +P+ TF VL S+ QL
Sbjct: 380 FDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTF--VLLLSIFSQLAD 437
Query: 360 L------HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ HC +I+ G+E E ++G N +
Sbjct: 438 INQGRGIHCDVIKFGFEA-ELIIG-------------------------------NSLLD 465
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y + G+ ++ +K+ S + DI+SWN VIA+ H D ++ MR + PD T
Sbjct: 466 VYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEAT 525
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+ +L CS L G +HG I K+ S+ + N LI+MY KCGS+ + +K+F M
Sbjct: 526 VLGILPMCSLLAVRRQGKEIHGYIFKSGF-ESNVPIGNALIEMYSKCGSLENCIKVFKYM 584
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+++V+TWTALISA G+ G ++AL+ F++ME G PD VA IA + AC H G+V+EG+
Sbjct: 585 KEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGL 644
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+RM Y +EP M+HY CVVDLL R G L +AE+ I +MP P+A +W L C+
Sbjct: 645 RFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACR 703
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 160/575 (27%), Positives = 275/575 (47%), Gaps = 46/575 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGG-LLSCDSLNPV-EG 58
M +R+ VS+NS+IS Y G+ EDAL M+ G P FT LL+C SL V EG
Sbjct: 182 MSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEG 241
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + K G+ D +G LL +Y + L E VF M K VTWN+++ + +
Sbjct: 242 VAVHGVIEKIGI-AGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQ 300
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E + LF +++ V S I DL+ G+ +H +I +GF+ + +
Sbjct: 301 LGRHEASVKLFMDMIDGFVP-DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVA 359
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N L++MY +C + +A+++F + +D V+WN++I +S + + LE + M ++
Sbjct: 360 CNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERK 419
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ TFV +++ + L + G+ IH VIK E ++ +G++L+D YAKC ++
Sbjct: 420 -PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLK 478
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLR--SSLAF 355
FS +S +I+SWN +I T F +I E+ G P+E T +L S LA
Sbjct: 479 VFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAV 538
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+ R G E + Y+ KSG S N+P N + +Y
Sbjct: 539 R---------RQGKEIHGYIF--------KSGFES---------NVP----IGNALIEMY 568
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
++ G +K+ ++ D+V+W +I+A G+ K+ L+ F+ M + + PD+ F+
Sbjct: 569 SKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFI 628
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+ + ACS + G +K + + + C ++D+ + G + + + M
Sbjct: 629 AFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYAC--VVDLLARSGLLAQAEEFILSM 686
Query: 534 TDR-NVITWTALISALGLNG---FAQRALEKFREM 564
+ + W AL+SA G AQR +K E+
Sbjct: 687 PMKPDASLWGALLSACRARGNTNIAQRVSKKILEL 721
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 246/504 (48%), Gaps = 35/504 (6%)
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE-IR 205
++ LS+ ++ +H L+I +G ++ + L++ Y Q S+ +F+ +
Sbjct: 25 LLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTN 84
Query: 206 DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
+V WN+II AL + F +AL Y M + P+ TF VINSCA + + LG +H
Sbjct: 85 NVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVH 144
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT 325
++ E D+++G+AL+D Y++ +L+ A F E+SN++ VSWN+LI GY S
Sbjct: 145 EHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWE 204
Query: 326 SIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
+ ++ G P+ FT S VL L C GSLM
Sbjct: 205 DALDMYHKFRMTGMVPDCFTMSSVL----------LAC--------------GSLMA--V 238
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
K G+ + + + I V+ N + +Y + + E ++ S++ D V+WN +I
Sbjct: 239 KEGVAVHGV--IEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMIC 296
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
A G ++ ++LF M + PD + S + AC + +L +G +H + +
Sbjct: 297 GYAQLGRHEASVKLFMDMIDGFV-PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSG-FE 354
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
DT CN+LIDMY KCG + ++ ++F+ ++ +TW +LI+ +G+ + LE F+ M
Sbjct: 355 CDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMM 414
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
+ + KPD V + +L+ + +G + + + +G E E+ + ++D+ + G
Sbjct: 415 K-MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIK-FGFEAELIIGNSLLDVYAKCGE 472
Query: 625 LKEAEKIITTMPFPPNALIWRTFL 648
+ + K+ + M + + W T +
Sbjct: 473 MDDLLKVFSYMS-AHDIISWNTVI 495
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 357/661 (54%), Gaps = 42/661 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP--VEG 58
MP + V++N++IS +++ G + L ++ M + G PT+ TF +LS + VEG
Sbjct: 285 MPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEG 344
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A+ + +GL A+ FVG++L+ LY + GC + +VF+ K++V WN++++ F +
Sbjct: 345 QQMHAAAVMHGLD-ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQ 403
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ E+ + +F ++R + E +FV ++ + G+Q+H + IKN D L V
Sbjct: 404 NELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFV 463
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN+ ++MY + I A+ +F + +D +SWN + LA++ +A+ + RM + +
Sbjct: 464 ANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGI 523
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ +F IN+C+ ++ + GK IH IK + + VGS+L+D Y+K ++E +
Sbjct: 524 TPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRK 583
Query: 299 CFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVL---RSSLA 354
F+++ +IV NALI G+ ++ +I L ++L+ G +P+ TFS +L SL
Sbjct: 584 IFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLN 643
Query: 355 FQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ Q+HC ++ G L D L V+ +AG
Sbjct: 644 SAIGKQVHCYTLKSGV------------------LYDDTLLGVS-------------LAG 672
Query: 414 IYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
IY ++ + KLL+++ + ++ W +I+ A NG L F MR + D
Sbjct: 673 IYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEA 732
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF S+L ACS + A G +HGLI K+ S +T + LIDMY KCG + SS + F E
Sbjct: 733 TFASVLKACSDVTAFADGKEIHGLITKSGFGSYET-ATSALIDMYSKCGDVISSFEAFKE 791
Query: 533 MTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ ++ +++ W ++I NG+A AL F++ME L KPD V + VL AC H GL+ E
Sbjct: 792 LKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISE 851
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G F M + YG+ P +DHY C +DLL R GHL+EA++ I +PF P+ ++W T+L C
Sbjct: 852 GRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAAC 911
Query: 652 Q 652
+
Sbjct: 912 R 912
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 160/654 (24%), Positives = 289/654 (44%), Gaps = 82/654 (12%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQL 61
PD + ++S+I+ Y R G ++AL +F M G P Q T ++S
Sbjct: 222 PD--TICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIIS------------ 267
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
L GR LD ++ + MP S V WN+++S + G
Sbjct: 268 -------------------TLASSGR---LDHATALLKKMPTPSTVAWNAVISGHAQSGL 305
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + L+ ++ + T S+F ++ +N + G+Q+H + +G D + V +S
Sbjct: 306 EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSS 365
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+N+Y +C A+ +F +++V WN ++ ++E +A+ ++ M + +
Sbjct: 366 LINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTD 425
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ TFV ++ +C L + LGK +H IKN ++ +FV +A +D Y+K + A FS
Sbjct: 426 EFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFS 485
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL-- 358
I K+ +SWNAL +G A +++ ++L G P++ +FS + + +
Sbjct: 486 LIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATET 545
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
Q+HCL I+ G + V SL+ +Y+
Sbjct: 546 GKQIHCLAIKYGICSNHAVGSSLID--------------------------------LYS 573
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G + K+ +Q++ IV N +IA N + E ++LF+ + + P + TF S
Sbjct: 574 KHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSS 633
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD- 535
+LS CS N A+G +H K+ ++ DT + L +Y K + + K+ EM D
Sbjct: 634 ILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 693
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+N+ WTA+IS NG+ +L F M + D +VL AC +G E+
Sbjct: 694 KNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI 753
Query: 596 FERMNRS------YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
+ +S +D Y D++ + KE + MP+ N++I
Sbjct: 754 HGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPW--NSMI 805
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 159/656 (24%), Positives = 290/656 (44%), Gaps = 77/656 (11%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLLS-CDSLNPVE-GA 59
+R + +S++S ++R G D L F Y+ G P QF +LS C + + G
Sbjct: 119 ERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGR 178
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ V+K+G F + F AL+ +Y + G + VF+ + + W+S+++ + +
Sbjct: 179 QVHCDVVKSG-FSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRV 237
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ++ + LF + + A + + V +I L++ L+
Sbjct: 238 GCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDH-------------------- 277
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
A + K + V+WN +I A+S L LY M ++
Sbjct: 278 ---------------ATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLW 322
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P ++TF ++++ A ++ + G+ +HA + + L+ +VFVGS+L++ YAKC A
Sbjct: 323 PTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNV 382
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSL---AF 355
F KNIV WNA++ G+ P + + +++ + +EFTF +L + +F
Sbjct: 383 FDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSF 442
Query: 356 QL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
L Q+HC+ I+ + +V + + Y+K G I DA A
Sbjct: 443 YLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKA-------------------- 482
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
L S + D +SWN + A N + +E + + K MR I PD+ +F
Sbjct: 483 ------------LFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSF 530
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+ ++ACS + G +H L K I S+ V + LID+Y K G + SS KIF ++
Sbjct: 531 STAINACSNIRATETGKQIHCLAIKYGICSNHA-VGSSLIDLYSKHGDVESSRKIFAQVD 589
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+++ ALI+ N A++ F+++ G KP V ++L+ C G +
Sbjct: 590 ASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQ 649
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ +S + + + + ++ L++A K++T MP N W + G
Sbjct: 650 VHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 705
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 227/490 (46%), Gaps = 36/490 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P ++ +S+N++ ++ E+A+ M M G P +F + +C ++ E G
Sbjct: 487 IPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETG 546
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K G+ C++ VG++L+ LY +HG ++ +F + S+V N++++ F +
Sbjct: 547 KQIHCLAIKYGI-CSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQ 605
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE-LL 177
+ ++ + LF ++++ + + +F ++ G S + G+Q+H +K+G Y+ L
Sbjct: 606 NNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTL 665
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ SL +Y + + A K+ ++ + +++ W II A++ +L + RM
Sbjct: 666 LGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHC 725
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V ++ TF V+ +C+ + GK IH + K+ SAL+D Y+KC ++ +
Sbjct: 726 NVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISS 785
Query: 297 HLCFSEISNK-NIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLA 354
F E+ NK +I+ WN++I+G+A LL + ++ L +P+E TF VL
Sbjct: 786 FEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVL----- 840
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+ H +I G + GS+ Y + + F+ L
Sbjct: 841 --IACTHSGLISEG----RHFFGSMRKVYGLTPRLDHYACFIDLLG-------------- 880
Query: 415 YNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC-AHNGDYKEVLELFKYMRAARIYPDNY 472
R G E + + QL RPD V W +AAC H + + + K + Y Y
Sbjct: 881 --RGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTY 938
Query: 473 TFVSLLSACS 482
+S L A +
Sbjct: 939 VLLSSLHAAT 948
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 122/527 (23%), Positives = 227/527 (43%), Gaps = 50/527 (9%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
+HG +++ G + +SLV +Y + + A R + ++++ A S +
Sbjct: 78 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137
Query: 223 FGKALEL--YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
G L Y+R + P+Q V+++C+ + G+ +H V+K+ VF
Sbjct: 138 PGDVLGAFRYIRCTAG-GRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCE 196
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYR 339
+ALVD YAKC ++ A F I+ + + W+++I Y ++ L + ++G
Sbjct: 197 AALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSA 256
Query: 340 PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL------ 393
P++ T ++ + + L +++ ++++ +A+SGL + L
Sbjct: 257 PDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDM 316
Query: 394 -----------------------AFVTALNIPRAVV----PANIIAG-----IYNRTGQY 421
AFV + A V AN+ G +Y + G
Sbjct: 317 RSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCP 376
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
++ + +IV WN ++ N +E + +F+YM + D +TFVS+L AC
Sbjct: 377 SDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGAC 436
Query: 482 SKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
+ L + LG +H + IK IS FV N +DMY K G+IG + +F+ + ++ I+
Sbjct: 437 TYLSSFYLGKQVHCVTIKNCMDIS--LFVANATLDMYSKYGAIGDAKALFSLIPYKDSIS 494
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W AL L N + A+ + M G PD V+ + AC + G ++ +
Sbjct: 495 WNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI-HCLA 553
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP----FPPNALI 643
YG+ ++DL ++G ++ + KI + P NALI
Sbjct: 554 IKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALI 600
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 357/661 (54%), Gaps = 42/661 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP--VEG 58
MP + V++N++IS +++ G + L ++ M + G PT+ TF +LS + VEG
Sbjct: 295 MPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEG 354
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A+ + +GL A+ FVG++L+ LY + GC + +VF+ K++V WN++++ F +
Sbjct: 355 QQMHAAAVMHGLD-ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQ 413
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ E+ + +F ++R + E +FV ++ + G+Q+H + IKN D L V
Sbjct: 414 NELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFV 473
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN+ ++MY + I A+ +F + +D +SWN + LA++ +A+ + RM + +
Sbjct: 474 ANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGI 533
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ +F IN+C+ ++ + GK IH IK + + VGS+L+D Y+K ++E +
Sbjct: 534 TPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRK 593
Query: 299 CFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVL---RSSLA 354
F+++ +IV NALI G+ ++ +I L ++L+ G +P+ TFS +L SL
Sbjct: 594 IFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLN 653
Query: 355 FQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ Q+HC ++ G L D L V+ +AG
Sbjct: 654 SAIGKQVHCYTLKSGV------------------LYDDTLLGVS-------------LAG 682
Query: 414 IYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
IY ++ + KLL+++ + ++ W +I+ A NG L F MR + D
Sbjct: 683 IYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEA 742
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF S+L ACS + A G +HGLI K+ S +T + LIDMY KCG + SS + F E
Sbjct: 743 TFASVLKACSDVTAFADGKEIHGLITKSGFGSYET-ATSALIDMYSKCGDVISSFEAFKE 801
Query: 533 MTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ ++ +++ W ++I NG+A AL F++ME L KPD V + VL AC H GL+ E
Sbjct: 802 LKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISE 861
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G F M + YG+ P +DHY C +DLL R GHL+EA++ I +PF P+ ++W T+L C
Sbjct: 862 GRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAAC 921
Query: 652 Q 652
+
Sbjct: 922 R 922
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 158/651 (24%), Positives = 288/651 (44%), Gaps = 80/651 (12%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQAS 64
+ + ++S+I+ Y R G ++AL +F M G P Q T ++S
Sbjct: 233 DTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIIS--------------- 277
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
L GR LD ++ + MP S V WN+++S + G +
Sbjct: 278 ----------------TLASSGR---LDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 318
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ L+ ++ + T S+F ++ +N + G+Q+H + +G D + V +SL+N
Sbjct: 319 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLIN 378
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
+Y +C A+ +F +++V WN ++ ++E +A+ ++ M + ++ T
Sbjct: 379 LYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFT 438
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
FV ++ +C L + LGK +H IKN ++ +FV +A +D Y+K + A FS I
Sbjct: 439 FVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIP 498
Query: 305 NKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL----Q 359
K+ +SWNAL +G A +++ ++L G P++ +FS + + + Q
Sbjct: 499 YKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQ 558
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+HCL I+ G + V SL+ +Y++ G
Sbjct: 559 IHCLAIKYGICSNHAVGSSLID--------------------------------LYSKHG 586
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+ K+ +Q++ IV N +IA N + E ++LF+ + + P + TF S+LS
Sbjct: 587 DVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILS 646
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD-RNV 538
CS N A+G +H K+ ++ DT + L +Y K + + K+ EM D +N+
Sbjct: 647 GCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNL 706
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
WTA+IS NG+ +L F M + D +VL AC +G E+
Sbjct: 707 FEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGL 766
Query: 599 MNRS------YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
+ +S +D Y D++ + KE + MP+ N++I
Sbjct: 767 ITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPW--NSMI 815
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 159/656 (24%), Positives = 290/656 (44%), Gaps = 77/656 (11%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLLS-CDSLNPVE-GA 59
+R + +S++S ++R G D L F Y+ G P QF +LS C + + G
Sbjct: 129 ERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGR 188
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ V+K+G F + F AL+ +Y + G + VF+ + + W+S+++ + +
Sbjct: 189 QVHCDVVKSG-FSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRV 247
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ++ + LF + + A + + V +I L++ L+
Sbjct: 248 GCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDH-------------------- 287
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
A + K + V+WN +I A+S L LY M ++
Sbjct: 288 ---------------ATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLW 332
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P ++TF ++++ A ++ + G+ +HA + + L+ +VFVGS+L++ YAKC A
Sbjct: 333 PTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNV 392
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSL---AF 355
F KNIV WNA++ G+ P + + +++ + +EFTF +L + +F
Sbjct: 393 FDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSF 452
Query: 356 QL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
L Q+HC+ I+ + +V + + Y+K G I DA A
Sbjct: 453 YLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKA-------------------- 492
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
L S + D +SWN + A N + +E + + K MR I PD+ +F
Sbjct: 493 ------------LFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSF 540
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+ ++ACS + G +H L K I S+ V + LID+Y K G + SS KIF ++
Sbjct: 541 STAINACSNIRATETGKQIHCLAIKYGICSNHA-VGSSLIDLYSKHGDVESSRKIFAQVD 599
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+++ ALI+ N A++ F+++ G KP V ++L+ C G +
Sbjct: 600 ASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQ 659
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ +S + + + + ++ L++A K++T MP N W + G
Sbjct: 660 VHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 715
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 227/490 (46%), Gaps = 36/490 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P ++ +S+N++ ++ E+A+ M M G P +F + +C ++ E G
Sbjct: 497 IPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETG 556
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K G+ C++ VG++L+ LY +HG ++ +F + S+V N++++ F +
Sbjct: 557 KQIHCLAIKYGI-CSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQ 615
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE-LL 177
+ ++ + LF ++++ + + +F ++ G S + G+Q+H +K+G Y+ L
Sbjct: 616 NNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTL 675
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ SL +Y + + A K+ ++ + +++ W II A++ +L + RM
Sbjct: 676 LGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHC 735
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V ++ TF V+ +C+ + GK IH + K+ SAL+D Y+KC ++ +
Sbjct: 736 NVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISS 795
Query: 297 HLCFSEISNK-NIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLA 354
F E+ NK +I+ WN++I+G+A LL + ++ L +P+E TF VL
Sbjct: 796 FEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVL----- 850
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+ H +I G + GS+ Y + + F+ L
Sbjct: 851 --IACTHSGLISEG----RHFFGSMRKVYGLTPRLDHYACFIDLLG-------------- 890
Query: 415 YNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACA-HNGDYKEVLELFKYMRAARIYPDNY 472
R G E + + QL RPD V W +AAC H + + + K + Y Y
Sbjct: 891 --RGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTY 948
Query: 473 TFVSLLSACS 482
+S L A +
Sbjct: 949 VLLSSLHAAT 958
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 122/527 (23%), Positives = 227/527 (43%), Gaps = 50/527 (9%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
+HG +++ G + +SLV +Y + + A R + ++++ A S +
Sbjct: 88 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 147
Query: 223 FGKALEL--YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
G L Y+R + P+Q V+++C+ + G+ +H V+K+ VF
Sbjct: 148 PGDVLGAFRYIRCTAG-GRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCE 206
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYR 339
+ALVD YAKC ++ A F I+ + + W+++I Y ++ L + ++G
Sbjct: 207 AALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSA 266
Query: 340 PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL------ 393
P++ T ++ + + L +++ ++++ +A+SGL + L
Sbjct: 267 PDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDM 326
Query: 394 -----------------------AFVTALNIPRAVV----PANIIAG-----IYNRTGQY 421
AFV + A V AN+ G +Y + G
Sbjct: 327 RSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCP 386
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
++ + +IV WN ++ N +E + +F+YM + D +TFVS+L AC
Sbjct: 387 SDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGAC 446
Query: 482 SKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
+ L + LG +H + IK IS FV N +DMY K G+IG + +F+ + ++ I+
Sbjct: 447 TYLSSFYLGKQVHCVTIKNCMDIS--LFVANATLDMYSKYGAIGDAKALFSLIPYKDSIS 504
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W AL L N + A+ + M G PD V+ + AC + G ++ +
Sbjct: 505 WNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI-HCLA 563
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP----FPPNALI 643
YG+ ++DL ++G ++ + KI + P NALI
Sbjct: 564 IKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALI 610
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 211/661 (31%), Positives = 357/661 (54%), Gaps = 42/661 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP--VEG 58
MP + V++N++IS +++ G + L ++ M + G PT+ TF +LS + VEG
Sbjct: 285 MPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEG 344
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A+ + +GL A+ FVG++L+ LY + GC + +VF+ K++V WN++++ F +
Sbjct: 345 QQMHAAAVMHGLD-ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQ 403
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ E+ + +F ++R + E +FV ++ + G+Q+H + IKN D L V
Sbjct: 404 NELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFV 463
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN+ ++MY + I A+ +F + +D +SWN + LA++ +A+ + RM + +
Sbjct: 464 ANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGI 523
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ +F IN+C+ ++ + GK IH IK + + VGS+L+D Y+K ++E +
Sbjct: 524 TPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRK 583
Query: 299 CFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVL---RSSLA 354
F+++ +IV NALI G+ ++ +I L ++L+ G +P+ TFS +L SL
Sbjct: 584 IFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLN 643
Query: 355 FQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ Q+HC ++ G L D L V+ +AG
Sbjct: 644 SAIGKQVHCYTLKSGV------------------LYDDTLLGVS-------------LAG 672
Query: 414 IYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
IY ++ + KLL+++ + ++ W +I+ A NG L F MR + D
Sbjct: 673 IYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEA 732
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF S+L ACS + A G +HGLI K+ S +T + LIDMY KCG + SS + F E
Sbjct: 733 TFASVLKACSDVTAFADGKEIHGLITKSGFGSYET-ATSALIDMYSKCGDVISSFEAFKE 791
Query: 533 MTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ ++ +++ W ++I NG+A AL F++ME L KPD V + VL AC H GL+ E
Sbjct: 792 LKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISE 851
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G F M + YG+ P +DHY C +DLL R GHL+EA++ I +PF P+ ++W T+L C
Sbjct: 852 GRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAAC 911
Query: 652 Q 652
+
Sbjct: 912 R 912
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 160/654 (24%), Positives = 289/654 (44%), Gaps = 82/654 (12%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQL 61
PD + ++S+I+ Y R G ++AL +F M G P Q T ++S
Sbjct: 222 PD--TICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIIS------------ 267
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
L GR LD ++ + MP S V WN+++S + G
Sbjct: 268 -------------------TLASSGR---LDHATALLKKMPTPSTVAWNAVISGHAQSGL 305
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + L+ ++ + T S+F ++ +N + G+Q+H + +G D + V +S
Sbjct: 306 EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSS 365
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+N+Y +C A+ +F +++V WN ++ ++E +A+ ++ M + +
Sbjct: 366 LINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTD 425
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ TFV ++ +C L + LGK +H IKN ++ +FV +A +D Y+K + A FS
Sbjct: 426 EFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFS 485
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL-- 358
I K+ +SWNAL +G A +++ ++L G P++ +FS + + +
Sbjct: 486 LIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATET 545
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
Q+HCL I+ G + V SL+ +Y+
Sbjct: 546 GKQIHCLAIKYGICSNHAVGSSLID--------------------------------LYS 573
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G + K+ +Q++ IV N +IA N + E ++LF+ + + P + TF S
Sbjct: 574 KHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSS 633
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD- 535
+LS CS N A+G +H K+ ++ DT + L +Y K + + K+ EM D
Sbjct: 634 ILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 693
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+N+ WTA+IS NG+ +L F M + D +VL AC +G E+
Sbjct: 694 KNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI 753
Query: 596 FERMNRS------YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
+ +S +D Y D++ + KE + MP+ N++I
Sbjct: 754 HGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPW--NSMI 805
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 159/656 (24%), Positives = 290/656 (44%), Gaps = 77/656 (11%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLLS-CDSLNPVE-GA 59
+R + +S++S ++R G D L F Y+ G P QF +LS C + + G
Sbjct: 119 ERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGR 178
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ V+K+G F + F AL+ +Y + G + VF+ + + W+S+++ + +
Sbjct: 179 QVHCDVVKSG-FSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRV 237
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ++ + LF + + A + + V +I L++ L+
Sbjct: 238 GCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDH-------------------- 277
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
A + K + V+WN +I A+S L LY M ++
Sbjct: 278 ---------------ATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLW 322
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P ++TF ++++ A ++ + G+ +HA + + L+ +VFVGS+L++ YAKC A
Sbjct: 323 PTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNV 382
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSL---AF 355
F KNIV WNA++ G+ P + + +++ + +EFTF +L + +F
Sbjct: 383 FDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSF 442
Query: 356 QL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
L Q+HC+ I+ + +V + + Y+K G I DA A
Sbjct: 443 YLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKA-------------------- 482
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
L S + D +SWN + A N + +E + + K MR I PD+ +F
Sbjct: 483 ------------LFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSF 530
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+ ++ACS + G +H L K I S+ V + LID+Y K G + SS KIF ++
Sbjct: 531 STAINACSNIRATETGKQIHCLAIKYGICSNHA-VGSSLIDLYSKHGDVESSRKIFAQVD 589
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+++ ALI+ N A++ F+++ G KP V ++L+ C G +
Sbjct: 590 ASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQ 649
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ +S + + + + ++ L++A K++T MP N W + G
Sbjct: 650 VHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 705
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 122/527 (23%), Positives = 227/527 (43%), Gaps = 50/527 (9%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
+HG +++ G + +SLV +Y + + A R + ++++ A S +
Sbjct: 78 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137
Query: 223 FGKALEL--YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
G L Y+R + P+Q V+++C+ + G+ +H V+K+ VF
Sbjct: 138 PGDVLGAFRYIRCTAG-GRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCE 196
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYR 339
+ALVD YAKC ++ A F I+ + + W+++I Y ++ L + ++G
Sbjct: 197 AALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSA 256
Query: 340 PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL------ 393
P++ T ++ + + L +++ ++++ +A+SGL + L
Sbjct: 257 PDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDM 316
Query: 394 -----------------------AFVTALNIPRAVV----PANIIAG-----IYNRTGQY 421
AFV + A V AN+ G +Y + G
Sbjct: 317 RSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCP 376
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
++ + +IV WN ++ N +E + +F+YM + D +TFVS+L AC
Sbjct: 377 SDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGAC 436
Query: 482 SKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
+ L + LG +H + IK IS FV N +DMY K G+IG + +F+ + ++ I+
Sbjct: 437 TYLSSFYLGKQVHCVTIKNCMDIS--LFVANATLDMYSKYGAIGDAKALFSLIPYKDSIS 494
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W AL L N + A+ + M G PD V+ + AC + G ++ +
Sbjct: 495 WNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI-HCLA 553
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP----FPPNALI 643
YG+ ++DL ++G ++ + KI + P NALI
Sbjct: 554 IKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALI 600
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 216/728 (29%), Positives = 362/728 (49%), Gaps = 79/728 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
MP+R+V S++ IIS + L +F MI PT+ +F +L S + +
Sbjct: 71 MPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRY 130
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ A ++ +GL C+ + L+GLY ++G + VF+++ K V+W +++S F
Sbjct: 131 AEQIHARIICHGLLCS-PIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFS 189
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G+ E+ + LFCE+ + + T F V+ G + + + GEQ+H LV K G E
Sbjct: 190 QNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETY 249
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+LV +Y + SAEK+F ++ +D VS+N++I LA+ ALEL+ +M D
Sbjct: 250 VCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDY 309
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P+ T ++++CA G+ +H+ VIK + D+ V AL+D Y C +++ AH
Sbjct: 310 LKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAH 369
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F +N+V WN +++ + + + F + +Q+ G PN+FT+ +LR+ +
Sbjct: 370 EMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVG 429
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAK--------------------------- 385
L Q+H +I+ G++ YV L+ YAK
Sbjct: 430 ALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALIS 489
Query: 386 --------------------SGLISDALAF---------VTALNIPRAVVPANIIAG--- 413
G+ SD + F + ALN R + + ++G
Sbjct: 490 GYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSE 549
Query: 414 ----------IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+Y R G+ E +++ D +SWN +I+ A +G ++ L++F M
Sbjct: 550 DLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMN 609
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
A++ +TF S +SA + + N+ G +H +I K SD V N LI Y KCGSI
Sbjct: 610 RAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGF-DSDIEVSNALITFYAKCGSI 668
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ + F EM ++N ++W A+I+ +G+ A+ F +M+ +G P+ V + VL+AC
Sbjct: 669 EDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSAC 728
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
H GLV +G+ FE M++ +G+ P+ HY CVVDL+ R G L A K I MP P+A I
Sbjct: 729 SHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATI 788
Query: 644 WRTFLEGC 651
WRT L C
Sbjct: 789 WRTLLSAC 796
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 166/607 (27%), Positives = 291/607 (47%), Gaps = 47/607 (7%)
Query: 48 LSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV 107
L +S + VE +L +LK G F ++ + L+ +Y G LD VV VFEDMP +S+
Sbjct: 19 LCLNSGSLVECKKLHGKILKLG-FGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVR 77
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ-DLEFGEQIHGL 166
+W+ I+S F + + LF ++ V+ TE SF V+ S + + + EQIH
Sbjct: 78 SWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHAR 137
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
+I +G +++N L+ +Y + I SA K+F ++ +D VSW +I +++ +A
Sbjct: 138 IICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEA 197
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
+ L+ M +FP F V++ C ++ +G+ +HA V K + +V +ALV
Sbjct: 198 IHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTL 257
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTF 345
Y++ N A FS++ +K+ VS+N+LI G A + L ++ Y +P+ T
Sbjct: 258 YSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTV 317
Query: 346 SHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA-FVTALN 400
+ +L + + L QLH +I+ G + V G+L+ Y I A F+TA
Sbjct: 318 ASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTA-- 375
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
+ ++V WN+++ A + E +F+
Sbjct: 376 -------------------------------QTENVVLWNVMLVAFGKLDNLSESFRIFR 404
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M+ + P+ +T+ S+L C+ + L LG +H + KT + +VC++LIDMY K
Sbjct: 405 QMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGF-QFNVYVCSVLIDMYAKH 463
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
G + ++ I +T+ +V++WTALIS + AL+ F+EM G + D + + +
Sbjct: 464 GKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAI 523
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA----EKIITTMP 636
+AC + +G ++ + S G ++ + +V L R G +KEA EKI
Sbjct: 524 SACAGIQALNQGRQIHAQSYVS-GYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDS 582
Query: 637 FPPNALI 643
N LI
Sbjct: 583 ISWNGLI 589
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 176/689 (25%), Positives = 307/689 (44%), Gaps = 94/689 (13%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
++ VS+ ++IS +S+ GY E+A+ +F M G PT + F +LS C + + G QL
Sbjct: 176 KDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQL 235
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A V K G + +V AL+ LY R VF M K V++NS++S + GF
Sbjct: 236 HALVFKYGS-SLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGF 294
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + LF ++ R + + ++ ++ L GEQ+H VIK G +++V +
Sbjct: 295 SDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGA 354
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+++Y C+ I +A +MF + +VV WN ++ A + +N ++ ++ +M + + PN
Sbjct: 355 LLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPN 414
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
Q T+ ++ +C + LG+ IH +VIK + +V+V S L+D YAK L+ AH+
Sbjct: 415 QFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILR 474
Query: 302 EISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
++ ++VSW ALI GYA + ++ E+L G + + FS + + Q L
Sbjct: 475 TLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQ 534
Query: 359 --QLH------------------------CLIIRMGYENYEYV-------LGSLMTSYAK 385
Q+H C I+ Y +E + L++ +A+
Sbjct: 535 GRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQ 594
Query: 386 SGLISDALAFVTALNIPR----------AVVPANIIAGI--------------------- 414
SG DAL +N + AV A IA I
Sbjct: 595 SGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEV 654
Query: 415 -------YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
Y + G + + ++ + VSWN +I + +G E + LF+ M+
Sbjct: 655 SNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGE 714
Query: 468 YPDNYTFVSLLSACSK--LCNLALG-----SSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
P++ TFV +LSACS L LG S HGL+ K + C ++D+ +
Sbjct: 715 MPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPA-----HYAC--VVDLISRA 767
Query: 521 GSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
G + + K EM + + W L+SA ++ + + +F L +P+ A +
Sbjct: 768 GFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVE--VGEFAAQHLLELEPEDSATYVL 825
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPE 608
L+ + + +M R+ GV+ E
Sbjct: 826 LSNMYAVSGKWDCRDQTRQMMRNRGVKKE 854
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 199/409 (48%), Gaps = 31/409 (7%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N T++++++ C + + K +H K++K + + + LVD Y +L+G F
Sbjct: 9 NCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVF 68
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
++ N+++ SW+ +I G+ K + L +++ P E +F+ VLR+
Sbjct: 69 EDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA-------- 120
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
C R+G E + ++ GL+ + +N + G+Y + G
Sbjct: 121 --CSGHRIGIRYAEQIHARIICH----GLLCSP-------------IISNPLIGLYAKNG 161
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
K+ L D VSW +I+ + NG +E + LF M A I+P Y F S+LS
Sbjct: 162 LIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLS 221
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
C+K+ +G LH L+ K S +T+VCN L+ +Y + + S+ K+F++M ++ +
Sbjct: 222 GCTKIKLFDVGEQLHALVFKYGS-SLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEV 280
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
++ +LIS L GF+ ALE F +M+ KPD V + ++L+AC G + +G +L +
Sbjct: 281 SFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYV 340
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
++ G+ +M ++DL V +K A ++ T N ++W L
Sbjct: 341 IKA-GISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQ-TENVVLWNVML 387
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 204/659 (30%), Positives = 350/659 (53%), Gaps = 42/659 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
MPD++V S+N ++ Y + E+A R+ M+ G +P ++TF +L+ D+ N +G
Sbjct: 165 MPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKG 224
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+L + +L G + D FVGTAL+ ++ + G +D+ + VF ++PR+ L+TW S+++ +
Sbjct: 225 GELFSLILNAG-WDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLAR 283
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
H + LF + V + +FV ++ ++ + LE G+++H + + G D E+ V
Sbjct: 284 HRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYV 343
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+L++MY +C + A ++F V+ R+VVSW +I A+ +A + +M +
Sbjct: 344 GTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGI 403
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+ TF+ ++ +C+ G+ IH ++IK D V +AL+ YAKC +L A
Sbjct: 404 EPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARN 463
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL---RSSLA 354
F IS +N+V+WNA+I Y ++ LL+ G +P+ TF+ +L +S A
Sbjct: 464 VFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDA 523
Query: 355 FQLLQ-LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+L + + LIIR G+E+ ++ +L++ + G ++A+N
Sbjct: 524 LELGKWVQSLIIRAGFESDLHIRNALVSMFVNCG------DLMSAMN------------- 564
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
L + + D+VSWN +IA +G+ + + FK M+ + + PD T
Sbjct: 565 -------------LFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQIT 611
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F LL+AC+ L G LH LI + + D V LI MY KCGSI + +F+ +
Sbjct: 612 FTGLLNACASPEALTEGRRLHALITEAA-LDCDVVVGTGLISMYTKCGSIDDAHLVFHNL 670
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+NV +WT++I+ +G + ALE F +M+ G KPD + + L+AC H GL++EG+
Sbjct: 671 PKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGL 730
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
FE M + + +EP M+HY C+VDL R G L EA + I M P++ +W L CQ
Sbjct: 731 HHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQ 788
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 163/653 (24%), Positives = 322/653 (49%), Gaps = 41/653 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQ 62
+N N+ ++ S+ G + +A+ + L + + + + T+ LL C + +
Sbjct: 67 KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+ +K D F+ L+ +Y + G + +F++MP K + +WN ++ + +H
Sbjct: 127 HNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRY 186
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
E+ L ++V+ V + +FV +++ ++ ++++ G ++ L++ G+D +L V +L
Sbjct: 187 EEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTAL 246
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
+NM+ +C G+ A K+F ++ RD+++W ++I LA F +A L+ M + V P++
Sbjct: 247 INMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDK 306
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
FV ++ +C + GK +HA++ + L+ +++VG+AL+ Y KC ++E A F+
Sbjct: 307 VAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNL 366
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVL----RSSLAFQL 357
+ +N+VSW A+I G+A FL ++++ G PN TF +L R S Q
Sbjct: 367 VKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQG 426
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
Q+H II+ GY + V +L++ YAK G + DA ++ R
Sbjct: 427 RQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDA-------------------RNVFER 467
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
+ N +V+WN +I A + Y + F+ + I PD+ TF S+
Sbjct: 468 ISKQN-------------VVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSI 514
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L+ C L LG + LI + SD + N L+ M+ CG + S++ +FN+M +R+
Sbjct: 515 LNVCKSPDALELGKWVQSLIIRAGF-ESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERD 573
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+++W +I+ +G Q A + F+ M+ G KPD++ +L AC + EG L
Sbjct: 574 LVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHA 633
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + ++ ++ ++ + + G + +A + +P N W + + G
Sbjct: 634 LITEA-ALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLP-KKNVYSWTSMITG 684
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 214/439 (48%), Gaps = 45/439 (10%)
Query: 166 LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
LVI FD L S +G +S + + V+I++ N + L+++ +
Sbjct: 35 LVILEEFDTFRLYTTSF-------SGSYSKGQGNEFVDIKNTQRANAFLNRLSKAGQLSE 87
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
A+ + L + + ++ T+ ++ C +N G+ IH + + ++ D+F+ + L+
Sbjct: 88 AMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLIS 147
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFT 344
YAKC N A F E+ +K++ SWN L+ GY F L E ++Q G +P+++T
Sbjct: 148 MYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYT 207
Query: 345 FSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
F ++L + + + +L LI+ G++ +V +L+ + K G + DAL
Sbjct: 208 FVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDAL------- 260
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
K+ + L R D+++W +I A + +K+ LF+
Sbjct: 261 -------------------------KVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQ 295
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M + PD FVSLL AC+ L G +H +K+ + ++ +V L+ MY KC
Sbjct: 296 VMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVG-LDTEIYVGTALLSMYTKC 354
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
GS+ ++++FN + RNV++WTA+I+ +G + A F +M G +P+RV +++L
Sbjct: 355 GSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSIL 414
Query: 581 TACRHGGLVREGMELFERM 599
AC +++G ++ +R+
Sbjct: 415 GACSRPSALKQGRQIHDRI 433
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 210/660 (31%), Positives = 343/660 (51%), Gaps = 41/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
MP +VV++N +IS + + G A+ FL M + T+ T G +LS + N G
Sbjct: 287 MPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A +K GL ++ +VG++L+ +Y + ++ VFE + ++ V WN+++ +
Sbjct: 347 LVVHAEAIKLGL-ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAH 405
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G M LF ++ S + + +F ++ + DLE G Q H ++IK L V
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFV 465
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LV+MY +C + A ++F+ + RD VSWNTIIG + EN +A +L++RM+ +
Sbjct: 466 GNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGI 525
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ + +C + GK +H +K L+ + GS+L+D Y+KC +E A
Sbjct: 526 VSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARK 585
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
FS + ++VS NALI GY+ + ++ L E+L G P+E TF+ ++ + + L
Sbjct: 586 VFSSMPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESL 645
Query: 359 ----QLHCLIIRMGYENY-EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q H II+ G+ + EY+ SL+ Y S +++A A + L+ P++
Sbjct: 646 TLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKS--------- 696
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
IV W +++ + NG Y+E L+ +K MR PD T
Sbjct: 697 ----------------------IVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQAT 734
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FV++L CS L +L G ++H LI D N LIDMY KCG + SS ++F+EM
Sbjct: 735 FVTVLRVCSVLSSLREGRAIHSLIFHLA-HDLDELTSNTLIDMYAKCGDMKSSSQVFDEM 793
Query: 534 TDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
R NV++W +LI+ NG+A+ AL+ F M PD + + VLTAC H G V +G
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDG 853
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++FE M YG+E +DH C+VDLL R+G+L+EA+ I P+A +W + L C+
Sbjct: 854 RKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACR 913
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 183/723 (25%), Positives = 319/723 (44%), Gaps = 111/723 (15%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEGAQ 60
+++V ++NS++S YS G LR F+ + P +FTF +LS + N G Q
Sbjct: 122 EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQ 181
Query: 61 LQASVLKNGL----FCADAFVG--------------------------TALLGLYGRHGC 90
+ S++K GL +C A V T L Y + G
Sbjct: 182 IHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGL 241
Query: 91 LDEVVSVFE-----------------------------------DMPRKSLVTWNSIVSI 115
+E V VFE +MP +V WN ++S
Sbjct: 242 PEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISG 301
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
GK G + F + +S V T S+ V+ + +L+ G +H IK G
Sbjct: 302 HGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V +SLV+MY +C + +A K+F+ +E R+ V WN +I A + K +EL++ M
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ TF ++++CA + +G H+ +IK L ++FVG+ALVD YAKC LE
Sbjct: 422 SGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALED 481
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLA 354
A F + +++ VSWN +I GY + + F L + + G + + L++
Sbjct: 482 ARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTN 541
Query: 355 ----FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+Q Q+HCL ++ G + + SL+ Y+K G+I DA
Sbjct: 542 VHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDAR----------------- 584
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
K+ S + +VS N +IA + N + +E + LF+ M + P
Sbjct: 585 ---------------KVFSSMPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTKGVNPS 628
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF +++ AC K +L LG+ HG I K S ++ L+ +Y + + +F
Sbjct: 629 EITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALF 688
Query: 531 NEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
+E++ ++++ WT ++S NGF + AL+ ++EM G PD+ + VL C +
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSL 748
Query: 590 REGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
REG + + + + ++D + ++D+ + G +K + ++ M N + W +
Sbjct: 749 REGRAIHSLI---FHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSL 805
Query: 648 LEG 650
+ G
Sbjct: 806 ING 808
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 150/530 (28%), Positives = 260/530 (49%), Gaps = 46/530 (8%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L G+ +H + G D E + N++V++Y +CA + AEK F +E +DV +WN+++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLSM 134
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ GK L ++ + +++FPN+ TF V+++ A N G+ IH +IK LE +
Sbjct: 135 YSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERN 194
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ- 335
+ G ALVD YAKCD L A F I + N V W L GY P ++ E ++
Sbjct: 195 SYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRG 254
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQLHCLII-------------------RMGYE--NYEY 374
G+RP+ F V+ + ++ L+ L+ + G E EY
Sbjct: 255 EGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEY 314
Query: 375 VL----GSLMTSYAKSGLISDALAFVTALNIPRAV--------VPANIIAG-----IYNR 417
L S+ ++ + G + A+ V L++ V + +NI G +Y++
Sbjct: 315 FLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
+ K+ LE + V WN +I AHNG+ +V+ELF M+++ D++TF SL
Sbjct: 375 CEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSL 434
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
LS C+ +L +GS H +I K + ++ + FV N L+DMY KCG++ + +IF M DR+
Sbjct: 435 LSTCAVSHDLEMGSQFHSIIIKKK-LTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRD 493
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
++W +I + A + F M G D L + L AC + + +G ++
Sbjct: 494 NVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQV-H 552
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP----FPPNALI 643
++ G++ + ++D+ + G +++A K+ ++MP NALI
Sbjct: 553 CLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALI 602
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 230/492 (46%), Gaps = 50/492 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
M DR+ VS+N+II Y + +A +F+ M + G L +C +++ + +G
Sbjct: 489 MCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQG 548
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K GL G++L+ +Y + G +++ VF MP S+V+ N++++ + +
Sbjct: 549 KQVHCLSVKCGLDRV-LHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQ 607
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE-LL 177
+ +E+ + LF E++ V +E +F ++ + L G Q HG +IK GF E
Sbjct: 608 NN-LEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEY 666
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ SL+ +Y + A +F ++ + +V W ++ +++ + +AL+ Y M D
Sbjct: 667 LGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD 726
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
P+Q TFV V+ C+ L + G++IH+ + A + D + L+D YAKC +++ +
Sbjct: 727 GALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSS 786
Query: 297 HLCFSEISNK-NIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTF-------SH 347
F E+ + N+VSWN+LI GYA + ++ + + Q P+E TF SH
Sbjct: 787 SQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSH 846
Query: 348 VLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ S ++ ++ +I + G E + ++ + G + +A F+ A N+
Sbjct: 847 AGKVSDGRKIFEM--MIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNL------ 898
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+PD W+ ++ AC +GD ++ R +
Sbjct: 899 -------------------------KPDARLWSSLLGACRIHGD--DMRGEIAAERLIEL 931
Query: 468 YPDNYTFVSLLS 479
P N + LLS
Sbjct: 932 EPQNSSAYVLLS 943
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 201/659 (30%), Positives = 349/659 (52%), Gaps = 42/659 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
M +++V S+N ++ Y + G E+A ++ M+ +P + TF +L+ D+ N +G
Sbjct: 171 MREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKG 230
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+L +LK G + D FVGTAL+ ++ + G + + VF+++P + LVTW S+++ +
Sbjct: 231 RELYNLILKAG-WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG + LF + V + +FV ++ ++ + LE G+++H + + G+D E+ V
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYV 349
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++++MY +C + A ++F V+ R+VVSW +I A+ +A + +M +
Sbjct: 350 GTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+ TF+ ++ +C+ G+ I +I+ D V +AL+ YAKC +L+ AH
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL---RSSLA 354
F +IS +N+V+WNA+I Y ++ LL+ G +PN TF+ +L +SS +
Sbjct: 470 VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529
Query: 355 FQLLQ-LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+L + +H LI++ G E+ +V +L++ + G ++A N
Sbjct: 530 LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCG------DLMSAKN------------- 570
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
L + + + D+VSWN +IA +G + + FK M+ + I PD T
Sbjct: 571 -------------LFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKIT 617
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F LL+AC+ L G LH LI + D V LI MY KCGSI + ++F+++
Sbjct: 618 FTGLLNACASPEALTEGRRLHALITEA-AFDCDVLVGTGLISMYTKCGSIEDAHQVFHKL 676
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+NV +WT++I+ +G + ALE F +M+ G KPD + + L+AC H GL+ EG+
Sbjct: 677 PKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGL 736
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+ M + + +EP M+HY C+VDL R G L EA + I M P++ +W L CQ
Sbjct: 737 HHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQ 794
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 164/654 (25%), Positives = 328/654 (50%), Gaps = 43/654 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEGAQL 61
++ N++++ S+ G +A+++ + + + + T+ LL C N +G ++
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ K+G+ D F+ L+ +Y + G +F+DM K + +WN ++ + +HG
Sbjct: 133 YNHIKKSGV-QPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E+ L ++V+ V + +FV +++ ++ ++++ G +++ L++K G+D +L V +
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTA 251
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+NM+ +C I A K+F ++ RD+V+W ++I LA F +A L+ RM + V P+
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPD 311
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ FV ++ +C + GK +HA++ + + +++VG+A++ Y KC ++E A F
Sbjct: 312 KVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFD 371
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
+ +N+VSW A+I G+A FL ++++ G PN TF +L + + L
Sbjct: 372 LVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKR 431
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
Q+ II GY + + V +L++ YAK G + DA
Sbjct: 432 GQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAH----------------------- 468
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
++ ++ + ++V+WN +I A + Y L F+ + I P++ TF S
Sbjct: 469 ---------RVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTS 519
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+L+ C +L LG +H LI K + SD V N L+ M+ CG + S+ +FN+M R
Sbjct: 520 ILNVCKSSDSLELGKWVHFLIMKAG-LESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKR 578
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
++++W +I+ +G Q A + F+ M+ G KPD++ +L AC + EG L
Sbjct: 579 DLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLH 638
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + + ++ ++ + + G +++A ++ +P N W + + G
Sbjct: 639 ALITEA-AFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMITG 690
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 216/453 (47%), Gaps = 42/453 (9%)
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILG 261
+I+D N ++ L+++ F +A+++ R+ + + T+ ++ C +N G
Sbjct: 70 ADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDG 129
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
+ I+ + K+ ++ D+F+ + L++ YAKC N A F ++ K++ SWN L+ GY
Sbjct: 130 ERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQH 189
Query: 322 SSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVL 376
F L E ++Q +P++ TF +L + + + +L+ LI++ G++ +V
Sbjct: 190 GLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVG 249
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
+L+ + K G I DA K+ L D+
Sbjct: 250 TALINMHIKCGDIGDA--------------------------------TKVFDNLPTRDL 277
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
V+W +I A +G +K+ LF+ M + PD FVSLL AC+ L G +H
Sbjct: 278 VTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHAR 337
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
+K+ ++ +V ++ MY KCGS+ ++++F+ + RNV++WTA+I+ +G
Sbjct: 338 MKEVG-WDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDE 396
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER-MNRSYGVEPEMDHYHCV 615
A F +M G +P+RV +++L AC ++ G ++ + + YG + + +
Sbjct: 397 AFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV--RTAL 454
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ + + G LK+A ++ + N + W +
Sbjct: 455 LSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMI 486
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 201/659 (30%), Positives = 349/659 (52%), Gaps = 42/659 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
M +++V S+N ++ Y + G E+A ++ M+ +P + TF +L+ D+ N +G
Sbjct: 171 MREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKG 230
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+L +LK G + D FVGTAL+ ++ + G + + VF+++P + LVTW S+++ +
Sbjct: 231 RELYNLILKAG-WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG + LF + V + +FV ++ ++ + LE G+++H + + G+D E+ V
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYV 349
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++++MY +C + A ++F V+ R+VVSW +I A+ +A + +M +
Sbjct: 350 GTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGI 409
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+ TF+ ++ +C+ G+ I +I+ D V +AL+ YAKC +L+ AH
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL---RSSLA 354
F +IS +N+V+WNA+I Y ++ LL+ G +PN TF+ +L +SS +
Sbjct: 470 VFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDS 529
Query: 355 FQLLQ-LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+L + +H LI++ G E+ +V +L++ + G ++A N
Sbjct: 530 LELGKWVHFLIMKAGLESDLHVSNALVSMFVNCG------DLMSAKN------------- 570
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
L + + + D+VSWN +IA +G + + FK M+ + I PD T
Sbjct: 571 -------------LFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKIT 617
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F LL+AC+ L G LH LI + D V LI MY KCGSI + ++F+++
Sbjct: 618 FTGLLNACASPEALTEGRRLHALITEA-AFDCDVLVGTGLISMYTKCGSIEDAHQVFHKL 676
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+NV +WT++I+ +G + ALE F +M+ G KPD + + L+AC H GL+ EG+
Sbjct: 677 PKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGL 736
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+ M + + +EP M+HY C+VDL R G L EA + I M P++ +W L CQ
Sbjct: 737 HHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQ 794
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 164/654 (25%), Positives = 328/654 (50%), Gaps = 43/654 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEGAQL 61
++ N++++ S+ G +A+++ + + + + T+ LL C N +G ++
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ K+G+ D F+ L+ +Y + G +F+DM K + +WN ++ + +HG
Sbjct: 133 YNHIKKSGV-QPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E+ L ++V+ V + +FV +++ ++ ++++ G +++ L++K G+D +L V +
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTA 251
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+NM+ +C I A K+F ++ RD+V+W ++I LA F +A L+ RM + V P+
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPD 311
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ FV ++ +C + GK +HA++ + + +++VG+A++ Y KC ++E A F
Sbjct: 312 KVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFD 371
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
+ +N+VSW A+I G+A FL ++++ G PN TF +L + + L
Sbjct: 372 LVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKR 431
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
Q+ II GY + + V +L++ YAK G + DA
Sbjct: 432 GQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAH----------------------- 468
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
++ ++ + ++V+WN +I A + Y L F+ + I P++ TF S
Sbjct: 469 ---------RVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTS 519
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+L+ C +L LG +H LI K + SD V N L+ M+ CG + S+ +FN+M R
Sbjct: 520 ILNVCKSSDSLELGKWVHFLIMKAG-LESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKR 578
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
++++W +I+ +G Q A + F+ M+ G KPD++ +L AC + EG L
Sbjct: 579 DLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLH 638
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + + ++ ++ + + G +++A ++ +P N W + + G
Sbjct: 639 ALITEA-AFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMIAG 690
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 216/453 (47%), Gaps = 42/453 (9%)
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILG 261
+I+D N ++ L+++ F +A+++ R+ + + T+ ++ C +N G
Sbjct: 70 ADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDG 129
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
+ I+ + K+ ++ D+F+ + L++ YAKC N A F ++ K++ SWN L+ GY
Sbjct: 130 ERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQH 189
Query: 322 SSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVL 376
F L E ++Q +P++ TF +L + + + +L+ LI++ G++ +V
Sbjct: 190 GLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVG 249
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
+L+ + K G I DA K+ L D+
Sbjct: 250 TALINMHIKCGDIGDA--------------------------------TKVFDNLPTRDL 277
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
V+W +I A +G +K+ LF+ M + PD FVSLL AC+ L G +H
Sbjct: 278 VTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHAR 337
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
+K+ ++ +V ++ MY KCGS+ ++++F+ + RNV++WTA+I+ +G
Sbjct: 338 MKEVG-WDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDE 396
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER-MNRSYGVEPEMDHYHCV 615
A F +M G +P+RV +++L AC ++ G ++ + + YG + + +
Sbjct: 397 AFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV--RTAL 454
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ + + G LK+A ++ + N + W +
Sbjct: 455 LSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMI 486
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 208/654 (31%), Positives = 352/654 (53%), Gaps = 43/654 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GA 59
PD +VS++++IS Y++ G AL F M G + +FTF +L +C + + G
Sbjct: 120 PD--LVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGK 177
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ V+ +G F D FV L+ +Y + + +F+++P +++V+WN++ S + +
Sbjct: 178 QVHGVVVVSG-FEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQI 236
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
F + + LF E+V S + E S +++ + +D G+ IHG +IK G+D++ A
Sbjct: 237 DFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSA 296
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+LV+MY + + A +F+ ++ D+VSWN +I E+ +ALEL +M +
Sbjct: 297 NALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGIC 356
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN T + +CAG+ LG+ +H+ ++K +E D+FV LVD Y+KCD LE A +
Sbjct: 357 PNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMA 416
Query: 300 FSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F+ + K++++WNA+I GY+ ++ L +E+ + G N+ T S +L+S+ Q++
Sbjct: 417 FNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVV 476
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q+H L ++ G+ + YV+ SL+ SY K + DA
Sbjct: 477 HVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDA---------------------- 514
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
++ + D+VS+ +I A A G +E L+LF M+ + PD +
Sbjct: 515 ----------ERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVC 564
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
SLL+AC+ L G LH I K + D F N L++MY KCGSI + + F+E+T
Sbjct: 565 SSLLNACANLSAFEQGKQLHVHILKYGFVL-DIFAGNSLVNMYAKCGSIDDAGRAFSELT 623
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+R +++W+A+I L +G ++AL+ F +M G P+ + L++VL AC H GLV E
Sbjct: 624 ERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKL 683
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
FE M +G +P +HY C++DLL R G + EA +++ MPF NA +W L
Sbjct: 684 YFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALL 737
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 174/614 (28%), Positives = 310/614 (50%), Gaps = 43/614 (7%)
Query: 30 LYMINRG-FEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYG 86
L +I++G F PT ++ LLS C + + G Q+ A + K+GL D + L+ LY
Sbjct: 44 LNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGL-SDDPSIRNHLINLYS 102
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
+ + ++ LV+W++++S + ++G + F E+ V E +F
Sbjct: 103 KCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSS 162
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
V+ S +DL G+Q+HG+V+ +GF+ ++ VAN+LV MY +C ++++F ++ R+
Sbjct: 163 VLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERN 222
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
VVSWN + + + G+A+ L+ M + + PN+ + ++N+C GL++S GK IH
Sbjct: 223 VVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHG 282
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG-YASKSSPT 325
+IK + D F +ALVD YAK +L A F +I +IVSWNA+I G +
Sbjct: 283 YLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQ 342
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL----LQLHCLIIRMGYENYEYVLGSLMT 381
++ LL ++ + G PN FT S L++ L QLH +++M E+ +V L+
Sbjct: 343 ALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVD 402
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
Y+K L+ DA A N+ L D+++WN
Sbjct: 403 MYSKCDLLEDAR---MAFNL-----------------------------LPEKDLIAWNA 430
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I+ + + E L LF M I + T ++L + + L + + +HGL K+
Sbjct: 431 IISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSG 490
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
SD +V N LID YGKC + + +IF E T +++++T++I+A G + AL+ F
Sbjct: 491 -FHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLF 549
Query: 562 REMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR 621
EM+ + KPDR ++L AC + +G +L + + YG ++ + +V++ +
Sbjct: 550 LEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILK-YGFVLDIFAGNSLVNMYAK 608
Query: 622 YGHLKEAEKIITTM 635
G + +A + + +
Sbjct: 609 CGSIDDAGRAFSEL 622
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 152/562 (27%), Positives = 276/562 (49%), Gaps = 55/562 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSL-NPVEG 58
+P+RNVVS+N++ S Y + + +A+ +F M+ G +P +F+ ++ +C L + G
Sbjct: 218 IPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRG 277
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ ++K G + D F AL+ +Y + G L + +SVFE + + +V+WN++++
Sbjct: 278 KIIHGYLIKLG-YDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336
Query: 119 HGFVEDCMFLFCELVRSEVA---LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
H E + L ++ RS + T SS + G+ + E G Q+H ++K + +
Sbjct: 337 HEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLK---ELGRQLHSSLMKMDMESD 393
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L V+ LV+MY +C + A F + +D+++WN II ++ +AL L++ M
Sbjct: 394 LFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHK 453
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ + NQTT ++ S AGLQ + + +H +K+ D++V ++L+D Y KC ++E
Sbjct: 454 EGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVED 513
Query: 296 AHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRS--- 351
A F E + ++VS+ ++I YA ++ L +E+ + +P+ F S +L +
Sbjct: 514 AERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACAN 573
Query: 352 -SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
S Q QLH I++ G+ + SL+ YAK G I DA
Sbjct: 574 LSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDA------------------ 615
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ S+L IVSW+ +I A +G ++ L+LF M + P+
Sbjct: 616 --------------GRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPN 661
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS----SDTFVCNMLIDMYGKCGSIGSS 526
+ T VS+L AC+ L + L+ E+ + + C +ID+ G+ G I +
Sbjct: 662 HITLVSVLGACNH-AGLVTEAKLY-FESMEELFGFKPMQEHYAC--MIDLLGRAGKINEA 717
Query: 527 VKIFNEMT-DRNVITWTALISA 547
V++ N+M + N W AL+ A
Sbjct: 718 VELVNKMPFEANASVWGALLGA 739
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 211/666 (31%), Positives = 365/666 (54%), Gaps = 50/666 (7%)
Query: 1 MP-DRNVVSFNSIISAYSRCGYVE-DALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPV 56
MP + V++N++IS Y++ +E + ++ M G PT+ TF +LS ++ +
Sbjct: 158 MPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFI 217
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
EG Q+ A+ +++GL A+ FVG++L+ LY + GC+ + + VF+ K++V WN++++
Sbjct: 218 EGRQVHAAAVRHGLD-ANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGL 276
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ + + + +F + R + E ++V V+ ++ G Q+ + IKN D L
Sbjct: 277 VRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASL 336
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VAN+ ++M+ + I A+ +F + +D VSWN ++ L +E +A+ + M++D
Sbjct: 337 FVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLD 396
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P++ +F VIN+C+ ++ + GK IH +K+++ + VGS+L+DFY+K ++E
Sbjct: 397 GVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESC 456
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLR--SSL 353
+++ +IV N LI G + +I L ++L+ G +P+ FTFS +L + L
Sbjct: 457 RKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGL 516
Query: 354 AFQLL--QLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
++ Q+HC ++ G+ N + +G SL+ +Y K+ + DA
Sbjct: 517 LSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDA------------------ 558
Query: 411 IAGIYNRTGQYNETVKLLSQLERPD---IVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
KLL +E PD +V W +++ A NG + L F MR+ +
Sbjct: 559 --------------NKLL--IEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDV 602
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
+PD TF S+L ACS++ L+ G +HGLI K+ S T + +IDMY KCG I SS
Sbjct: 603 HPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKT-ATSAIIDMYSKCGDIISSF 661
Query: 528 KIFNEMTDRNVIT-WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
+ F E+ + IT W ++I NG+A AL F++M+ K D V + VL AC H
Sbjct: 662 EAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHA 721
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
GL+ EG F+ M++ YG+ P +DHY C +DLL R GHL+EA+++I +PF P+ +IW T
Sbjct: 722 GLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIWAT 781
Query: 647 FLEGCQ 652
+L C+
Sbjct: 782 YLAACR 787
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 153/691 (22%), Positives = 285/691 (41%), Gaps = 110/691 (15%)
Query: 36 GFEPTQFTFGGLLS-CDSLNP-VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDE 93
G P QF LS C L V G Q K GL + AF AL+ +Y R G + +
Sbjct: 26 GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLG-SGAFCAAALVNMYARCGRVGD 84
Query: 94 VVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
VF + V W S++S + + G ++ + LF + + + + V V+ L+
Sbjct: 85 ARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTA 144
Query: 154 EQDLEFGEQ-IHGL----------VIKNGFDYELLVANSLVNMY--FQCAGIWSAEKMFK 200
LE +H + + +G+ + + + + +Y +C G+W F
Sbjct: 145 LGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFA 204
Query: 201 D-----------VEIRDV------------------------------------------ 207
+E R V
Sbjct: 205 SMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEK 264
Query: 208 --VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
V WN ++ L +E +A++++L M + ++ T+V V+ +CA L + LG+ +
Sbjct: 265 NVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQ 324
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT 325
IKN ++ +FV +A +D ++K ++ A F+ I+ K+ VSWNAL++G
Sbjct: 325 CVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDE 384
Query: 326 SIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLM 380
+++ + L G P+E +F+ V+ + + Q+HCL ++ + V SL+
Sbjct: 385 EAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLI 444
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
Y+K G + K+L+Q++ IV N
Sbjct: 445 DFYSKHGDVESCR--------------------------------KVLAQVDASSIVPRN 472
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
++IA N E ++LF+ + + P ++TF S+LS C+ L + +G +H K+
Sbjct: 473 VLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKS 532
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALE 559
++ DT V L+ Y K + K+ EM D +N++ WTA++S NG++ ++L
Sbjct: 533 GFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLL 592
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
F M PD V ++L AC + +G E+ + +S G ++D+
Sbjct: 593 SFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKS-GFGSYKTATSAIIDMY 651
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ G + + + + + +W + + G
Sbjct: 652 SKCGDIISSFEAFKELKSKQDITLWNSMILG 682
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 221/473 (46%), Gaps = 50/473 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
++ VS+N+++ + E+A+ M M G P + +F ++ +C ++ E G Q+
Sbjct: 365 KDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQI 424
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+K+ + C++ VG++L+ Y +HG ++ V + S+V N +++ ++
Sbjct: 425 HCLAMKHSI-CSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNR 483
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELLVAN 180
++ + LF +++R + + +F ++ G + G+Q+H +K+GF + + V
Sbjct: 484 EDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGV 543
Query: 181 SLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
SLV Y + A K+ ++ + +++V W I+ A++ ++L + RM V
Sbjct: 544 SLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVH 603
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P++ TF ++ +C+ + GK IH +IK+ SA++D Y+KC ++ +
Sbjct: 604 PDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEA 663
Query: 300 FSEI-SNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQL 357
F E+ S ++I WN++ILG+A LL + +Q + +E TF VL
Sbjct: 664 FKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVL-------- 715
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAG 413
+ C A +GLIS+ + +++ ++P
Sbjct: 716 --IAC---------------------AHAGLISEGRHYFDSMSKVYGIMPRVDHYACFID 752
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD-------YKEVLEL 458
+ R G E +++++L RPD V W +AAC + D KE++EL
Sbjct: 753 LLGRGGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVEL 805
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09040, mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/660 (31%), Positives = 342/660 (51%), Gaps = 41/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
M +VV++N +IS + + G A+ F M + T+ T G +LS + N G
Sbjct: 287 MSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A +K GL ++ +VG++L+ +Y + ++ VFE + K+ V WN+++ +
Sbjct: 347 LVVHAEAIKLGL-ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G M LF ++ S + + +F ++ + DLE G Q H ++IK L V
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFV 465
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LV+MY +C + A ++F+ + RD V+WNTIIG+ + EN +A +L+ RM++ +
Sbjct: 466 GNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGI 525
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ + +C + GK +H +K L+ D+ GS+L+D Y+KC ++ A
Sbjct: 526 VSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARK 585
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
FS + ++VS NALI GY+ + ++ L E+L G P+E TF+ ++ + + L
Sbjct: 586 VFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESL 645
Query: 359 ----QLHCLIIRMGYENY-EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q H I + G+ + EY+ SL+ Y S +++A A + L+ P++
Sbjct: 646 TLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS--------- 696
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
IV W +++ + NG Y+E L+ +K MR + PD T
Sbjct: 697 ----------------------IVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQAT 734
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FV++L CS L +L G ++H LI D N LIDMY KCG + S ++F+EM
Sbjct: 735 FVTVLRVCSVLSSLREGRAIHSLIFHL-AHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Query: 534 TDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
R NV++W +LI+ NG+A+ AL+ F M PD + + VLTAC H G V +G
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDG 853
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++FE M YG+E +DH C+VDLL R+G+L+EA+ I P+A +W + L C+
Sbjct: 854 RKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACR 913
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 184/723 (25%), Positives = 319/723 (44%), Gaps = 111/723 (15%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
+++V ++NS++S YS G LR F+ + P +FTF +LS C VE G Q
Sbjct: 122 EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQ 181
Query: 61 LQASVLKNGL----FCADAFVG--------------------------TALLGLYGRHGC 90
+ S++K GL +C A V T L Y + G
Sbjct: 182 IHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGL 241
Query: 91 LDEVVSVFE-----------------------------------DMPRKSLVTWNSIVSI 115
+E V VFE +M +V WN ++S
Sbjct: 242 PEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISG 301
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
GK G + F + +S V T S+ V+ + +L+ G +H IK G
Sbjct: 302 HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V +SLV+MY +C + +A K+F+ +E ++ V WN +I A + K +EL++ M
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ TF ++++CA + +G H+ +IK L ++FVG+ALVD YAKC LE
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
A F + +++ V+WN +I Y + + F L + + L G + + L++
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTH 541
Query: 355 ----FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+Q Q+HCL ++ G + + SL+ Y+K G+I DA
Sbjct: 542 VHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDAR----------------- 584
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
K+ S L +VS N +IA + N + +E + LF+ M + P
Sbjct: 585 ---------------KVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPS 628
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF +++ AC K +L LG+ HG I K S ++ L+ MY + + +F
Sbjct: 629 EITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALF 688
Query: 531 NEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
+E++ ++++ WT ++S NGF + AL+ ++EM G PD+ + VL C +
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSL 748
Query: 590 REGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
REG + + + + ++D + ++D+ + G +K + ++ M N + W +
Sbjct: 749 REGRAIHSLI---FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSL 805
Query: 648 LEG 650
+ G
Sbjct: 806 ING 808
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 151/530 (28%), Positives = 260/530 (49%), Gaps = 46/530 (8%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L G+ +H + G D E + N++V++Y +CA + AEK F +E +DV +WN+++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ GK L ++ + + +FPN+ TF V+++CA N G+ IH +IK LE +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ- 335
+ G ALVD YAKCD + A F I + N V W L GY P L+ E ++
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQ----------------LHCLIIRMGYENYEYVL--- 376
G+RP+ F V+ + + L+ + +I G E V
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEY 314
Query: 377 ------GSLMTSYAKSGLISDALAFVTALNIPRAV--------VPANIIAG-----IYNR 417
S+ ++ + G + A+ V L++ V + +NI G +Y++
Sbjct: 315 FFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
+ K+ LE + V WN +I AHNG+ +V+ELF M+++ D++TF SL
Sbjct: 375 CEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSL 434
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
LS C+ +L +GS H +I K + ++ + FV N L+DMY KCG++ + +IF M DR+
Sbjct: 435 LSTCAASHDLEMGSQFHSIIIKKK-LAKNLFVGNALVDMYAKCGALEDARQIFERMCDRD 493
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+TW +I + + A + F+ M G D L + L AC H + +G ++
Sbjct: 494 NVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV-H 552
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP----FPPNALI 643
++ G++ ++ ++D+ + G +K+A K+ +++P NALI
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALI 602
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 220/464 (47%), Gaps = 48/464 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
M DR+ V++N+II +Y + +A +F M G L +C ++ + +G
Sbjct: 489 MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG 548
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K GL D G++L+ +Y + G + + VF +P S+V+ N++++ + +
Sbjct: 549 KQVHCLSVKCGLD-RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ 607
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE-LL 177
+ +E+ + LF E++ V +E +F ++ + L G Q HG + K GF E
Sbjct: 608 NN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEY 666
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ SL+ MY G+ A +F ++ + +V W ++ +++ + +AL+ Y M D
Sbjct: 667 LGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD 726
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+Q TFV V+ C+ L + G++IH+ + A + D + L+D YAKC +++G+
Sbjct: 727 GVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGS 786
Query: 297 HLCFSEISNK-NIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTF-------SH 347
F E+ + N+VSWN+LI GYA + ++ + + Q P+E TF SH
Sbjct: 787 SQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSH 846
Query: 348 VLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ S ++ ++ +I + G E + ++ + G + +A F+ A N+
Sbjct: 847 AGKVSDGRKIFEM--MIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNL------ 898
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
+PD W+ ++ AC +GD
Sbjct: 899 -------------------------KPDARLWSSLLGACRIHGD 917
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 198/429 (46%), Gaps = 45/429 (10%)
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
+GK++H+K + ++ + +G+A+VD YAKC + A F + K++ +WN+++ Y+
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYS 136
Query: 320 SKSSPTSIFL-LIELLQLGYRPNEFTFSHVLRSSLAFQL-----LQLHCLIIRMGYENYE 373
S P + + L + PN+FTFS VL S+ A + Q+HC +I+MG E
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVL-STCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG-------------------- 413
Y G+L+ YAK ISDA + P V + +G
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 414 --------------IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
Y R G+ + L ++ PD+V+WN++I+ G +E F
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
MR + + T S+LSA + NL LG +H K ++S+ +V + L+ MY K
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG-LASNIYVGSSLVSMYSK 374
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
C + ++ K+F + ++N + W A+I NG + + +E F +M+ G+ D ++
Sbjct: 375 CEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSL 434
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
L+ C + G + F + + + + +VD+ + G L++A +I M
Sbjct: 435 LSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRD 493
Query: 640 NALIWRTFL 648
N + W T +
Sbjct: 494 N-VTWNTII 501
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 218/660 (33%), Positives = 348/660 (52%), Gaps = 43/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPV-EG 58
MP R+V S+ ++SAY + G E+AL +F M+ G P +FT L SC +L G
Sbjct: 76 MPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHG 135
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ QA V K+G F ++ +G+AL+ Y + GC E VFE M +V+W +VS F +
Sbjct: 136 TRFQALVTKSG-FDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVE 194
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + L+ ++++ VA E +FV ++ S+ L +G+ +H ++ + L++
Sbjct: 195 AGSWSQALQLYHRMIQTGVAPNEFTFVKLL-AASSFLGLNYGKLVHAHLMMWRIELNLVL 253
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LV+MY +C I A K+ K DV W II +S F +A+ + M V
Sbjct: 254 KTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGV 313
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL-EGAH 297
PN T+ ++N+C+ + LGK IH++V+ LE DV VG++LVD Y KC N+ E A
Sbjct: 314 VPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAV 373
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F I++ N++SW +LI G++ SI + + +G RPN FT S +L + +
Sbjct: 374 RAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIK 433
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L +LH II+ +N V +L+ +YA G++ DA VT++ R V+ +A
Sbjct: 434 SLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAW-HVTSMMKHRDVITYTSLA 492
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
N+TG + + +++ + + D+ R+ D +
Sbjct: 493 TRINQTGNHEMALNIITHMNKDDV-----------------------------RM--DGF 521
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+ S LSA + + + G LH K+ + S V N L+D+YGKCG I + + F E
Sbjct: 522 SLASFLSAAAGIPIMETGKQLHCYSVKSG-LGSWISVSNGLVDLYGKCGCIHDAHRSFLE 580
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+T+ + ++W LI L NG AL F +M G +PD++ + VL AC HGGLV G
Sbjct: 581 ITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMG 640
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++ F+ M +G+ P++DHY C+VDLL R G L+EA +I TMPF P+ALI++T L C+
Sbjct: 641 LDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACK 700
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 166/614 (27%), Positives = 291/614 (47%), Gaps = 57/614 (9%)
Query: 50 CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
C+S + +G + + ++K G F D F+ LL LYG+ + E +F++MP + + +W
Sbjct: 26 CNSRSVRDGICIHSPIIKMG-FQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASW 84
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
++S +GK G E+ + LF ++ S E + + S ++ G + LV K
Sbjct: 85 TMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTK 144
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
+GFD ++ ++L++ Y +C A ++F+ + D+VSW ++ + E+ ++ +AL+L
Sbjct: 145 SGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQL 204
Query: 230 YLRMSVDIVFPNQTTFVYVI--NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
Y RM V PN+ TFV ++ +S GL GK +HA ++ +E ++ + +ALVD Y
Sbjct: 205 YHRMIQTGVAPNEFTFVKLLAASSFLGLN---YGKLVHAHLMMWRIELNLVLKTALVDMY 261
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFS 346
KC ++E A ++ W A+I G+ S +I E+ G PN FT+S
Sbjct: 262 CKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYS 321
Query: 347 HVLR---SSLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAK-SGLISDAL-AFVTALN 400
+L S LA L Q+H ++ G EN V SL+ Y K S +I DA+ AF
Sbjct: 322 GILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAF----- 376
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
R + N+I SW +IA + +G +E +++F
Sbjct: 377 --RGIASPNVI--------------------------SWTSLIAGFSEHGLEEESIKVFG 408
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M+ + P+++T ++L AC + +L LHG I K +D V N L+D Y
Sbjct: 409 AMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNN-ADNDVVVGNALVDAYAGL 467
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
G + + + + M R+VIT+T+L + + G + AL M + D +L + L
Sbjct: 468 GMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFL 527
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV----VDLLVRYGHLKEAEKIITTMP 636
+A ++ G +L Y V+ + + V VDL + G + +A + +
Sbjct: 528 SAAAGIPIMETGKQL-----HCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEIT 582
Query: 637 FPPNALIWRTFLEG 650
P+A+ W + G
Sbjct: 583 -EPDAVSWNGLIFG 595
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 219/445 (49%), Gaps = 32/445 (7%)
Query: 141 ESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
E S + I N + + G IH +IK GF ++ ++N+L+++Y +C G+ A ++F
Sbjct: 15 EYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFD 74
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
++ RDV SW ++ A + N +ALEL+ M + +PN+ T + SC+ L+
Sbjct: 75 EMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNH 134
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
G A V K+ + + +GSAL+DFY+KC + A+ F ++N +IVSW ++ +
Sbjct: 135 GTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVE 194
Query: 321 KSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
S ++ L ++Q G PNEFTF +L +S L NY G L
Sbjct: 195 AGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGL-------------NY----GKL 237
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+ ++ I L TAL +Y + + VK+ D+ W
Sbjct: 238 VHAHLMMWRIELNLVLKTAL------------VDMYCKCQSIEDAVKVSKLTLEYDVFLW 285
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+I+ + ++E + F M + + P+N+T+ +L+ACS + L LG +H +
Sbjct: 286 TAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVM 345
Query: 500 TEIISSDTFVCNMLIDMYGKCGS-IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
+ +D V N L+DMY KC + I +V+ F + NVI+WT+LI+ +G + ++
Sbjct: 346 AG-LENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESI 404
Query: 559 EKFREMEFLGFKPDRVALIAVLTAC 583
+ F M+ +G +P+ L +L AC
Sbjct: 405 KVFGAMQGVGVRPNSFTLSTILGAC 429
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 223/489 (45%), Gaps = 53/489 (10%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQ 62
+V + +IIS +++ +A+ F M G P FT+ G+L +C S+ ++ G Q+
Sbjct: 281 DVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIH 340
Query: 63 ASVLKNGLFCADAFVGTALLGLYGR-HGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ V+ GL D VG +L+ +Y + +++ V F + ++++W S+++ F +HG
Sbjct: 341 SRVVMAGLE-NDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGL 399
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E+ + +F + V + ++ + L ++HG +IKN D +++V N+
Sbjct: 400 EEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNA 459
Query: 182 LVNMYFQCAGI---WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
LV+ Y + W M K RDV+++ ++ + ++ N AL + M+ D V
Sbjct: 460 LVDAYAGLGMVDDAWHVTSMMKH---RDVITYTSLATRINQTGNHEMALNIITHMNKDDV 516
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ + +++ AG+ GK +H +K+ L + V + LVD Y KC + AH
Sbjct: 517 RMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHR 576
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F EI+ + VSWN LI G AS +S E ++L G P++ T
Sbjct: 577 SFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQIT------------- 623
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAG 413
CL++ + + + GL+ L + ++ + P +
Sbjct: 624 ----CLLV--------------LYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVD 665
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYM--RAARIYPD 470
+ R G+ E + ++ + +PD + + ++ AC +G+ + L ++M + + P
Sbjct: 666 LLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGN----IPLGEHMARQGLELDPS 721
Query: 471 NYTFVSLLS 479
+ F LL+
Sbjct: 722 DPAFYVLLA 730
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 194/646 (30%), Positives = 337/646 (52%), Gaps = 13/646 (2%)
Query: 18 RCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQASVLKNGLFCADAF 76
+ G +++A+++ + RG T+G ++ C L E ++ L D +
Sbjct: 55 KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
+G +L+ Y + G + V VF M + +VTW+S+++ + + F + +
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN 174
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
+ +F+ ++ +N LE +IH +V +G + ++ VA +L+ MY +C I A
Sbjct: 175 IEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLAC 234
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
++F+ ++ R+VVSW II A A+ +A ELY +M + PN TFV ++NSC +
Sbjct: 235 EIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPE 294
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
G+ IH+ + + LE DV V +AL+ Y KC+ ++ A F +S ++++SW+A+I
Sbjct: 295 ALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIA 354
Query: 317 GYAS-----KSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIR 366
GYA K S +F L+E ++ G PN+ TF +L++ L Q+H I +
Sbjct: 355 GYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISK 414
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
+G+E+ + ++ YAK G I +A + + V A+++ +Y + G K
Sbjct: 415 VGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLT-MYIKCGDLTSAEK 473
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+ S++ ++VSWN++IA A +GD +V EL M+ PD T +S+L AC L
Sbjct: 474 VFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSA 533
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L G +H K + SDT V LI MY KCG + + +F+++++R+ + W A+++
Sbjct: 534 LERGKLVHAEAVKLG-LESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLA 592
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
G +G A++ F+ M P+ + AV++AC GLV+EG E+F M + ++
Sbjct: 593 GYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMK 652
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
P HY C+VDLL R G L+EAE+ I MP P+ +W L C+
Sbjct: 653 PGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACK 698
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 148/624 (23%), Positives = 295/624 (47%), Gaps = 77/624 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M R+VV+++S+I+AY+ + A F M + EP + TF +L +C++ + +E A
Sbjct: 139 MTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKA 198
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ +V+K D V TAL+ +Y + G + +F+ M +++V+W +I+ +H
Sbjct: 199 REIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQH 258
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + L+ +++++ ++ +FV +++ + + L G +IH + + G + +++VA
Sbjct: 259 RKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVA 318
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES-----ENFGKALELYLRMS 234
N+L+ MY +C I A + F + RDV+SW+ +I A+S E+ + +L RM
Sbjct: 319 NALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMR 378
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA------ 288
+ VFPN+ TF+ ++ +C+ G+ IHA++ K E D + +A+ + YA
Sbjct: 379 REGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIY 438
Query: 289 -------------------------KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS 323
KC +L A FSE+S +N+VSWN +I GYA
Sbjct: 439 EAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGD 498
Query: 324 PTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGS 378
+F L+ +++ G++P+ T +L + A L+ +H +++G E+ V S
Sbjct: 499 IAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATS 558
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
L+ G+Y++ G+ E + ++ D V+
Sbjct: 559 LI--------------------------------GMYSKCGEVTEARTVFDKISNRDTVA 586
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
WN ++A +G E ++LFK M R+ P+ TF +++SAC + + G + +++
Sbjct: 587 WNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQ 646
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRA 557
+ + ++D+ G+ G + + + M + ++ W AL+ A + Q
Sbjct: 647 EDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQ-- 704
Query: 558 LEKFREMEFLGFKPDRVALIAVLT 581
L ++ L +P ++ L+
Sbjct: 705 LAEWAAHHILRLEPSNASVYVTLS 728
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 211/728 (28%), Positives = 361/728 (49%), Gaps = 79/728 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVE- 57
+P NV +N +IS L +F MI P + TF +L S P +
Sbjct: 71 IPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQV 130
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ A ++ +G F + V L+ LY ++G +D VFE + K V+W +++S
Sbjct: 131 TEQIHAKIIHHG-FGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLS 189
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G ++ + LFC++ +S V T F V+ + + + GEQ+HG ++K G E
Sbjct: 190 QNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETF 249
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+LV +Y + + +AE++F + RD +S+N++I LA+ +AL+L+ +M +D
Sbjct: 250 VCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDC 309
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P+ T ++++CA + GK +H+ VIK + D+ + +L+D Y KC ++E AH
Sbjct: 310 MKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAH 369
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F +N+V WN +++ Y + + + + +Q+ G PN++T+ +LR+ +
Sbjct: 370 EYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLG 429
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAK--------------------------- 385
L Q+H +I+ G++ YV L+ YAK
Sbjct: 430 ALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIA 489
Query: 386 --------------------SGLISDALAF---------VTALNIPRAVVPANIIAG--- 413
G+ SD + F + ALN + + + I+G
Sbjct: 490 GYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSE 549
Query: 414 ----------IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+Y R G+ + +++ D +SWN +I+ A +G +E L++F M
Sbjct: 550 DLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMN 609
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
A + + +TF S +SA + N+ G +H ++ KT S+T N+LI +Y KCGSI
Sbjct: 610 QAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGY-DSETEASNVLITLYSKCGSI 668
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ + F EM ++NV++W A+I+ +G+ A+ F EM+ LG P+ V + VL+AC
Sbjct: 669 EDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSAC 728
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
H GLV EG+ F M++ +G+ P+ +HY CVVDLL R L A + I MP P+A+I
Sbjct: 729 SHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMI 788
Query: 644 WRTFLEGC 651
WRT L C
Sbjct: 789 WRTLLSAC 796
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 162/616 (26%), Positives = 295/616 (47%), Gaps = 55/616 (8%)
Query: 42 FTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM 101
+ F G + SL ++ +L A + K+G F + +G+ L+ +Y HG +D + +F+D+
Sbjct: 15 WLFEGCFNSGSL--LDAKKLHARIFKSG-FDGEDVLGSRLIDIYLAHGEVDNAIKLFDDI 71
Query: 102 PRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS-NEQDLEFG 160
P ++ WN ++S + LF ++ V ES+F V+ S + +
Sbjct: 72 PSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVT 131
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
EQIH +I +GF LV N L+++Y + + A+ +F+ + ++D VSW +I L+++
Sbjct: 132 EQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQN 191
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
+A+ L+ +M V P F V+++C ++ LG+ +H ++K L + FV
Sbjct: 192 GREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVC 251
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YR 339
+ALV Y++ NL A FS++ ++ +S+N+LI G A + L E +QL +
Sbjct: 252 NALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMK 311
Query: 340 PNEFTFSHVLRS----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
P+ T + +L + ++ QLH +I+MG + + GSL+ Y K I A +
Sbjct: 312 PDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEY 371
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
E ++V WN+++ A G+ E
Sbjct: 372 FLT--------------------------------TETENVVLWNVMLVAYGQLGNLSES 399
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS----DTFVCN 511
+F M+ + P+ YT+ S+L C+ L L LG +H T++I S + +VC+
Sbjct: 400 YWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIH-----TQVIKSGFQFNVYVCS 454
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
+LIDMY K G + ++ I + + +V++WTA+I+ + AL+ F+EME G +
Sbjct: 455 VLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRS 514
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA--- 628
D + + ++AC + +G ++ + S G ++ + +V L R G ++A
Sbjct: 515 DNIGFSSAISACAGIQALNQGQQIHAQSYIS-GYSEDLSIGNALVSLYARCGRAQDAYLA 573
Query: 629 -EKIITTMPFPPNALI 643
EKI NALI
Sbjct: 574 FEKIDAKDNISWNALI 589
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/514 (25%), Positives = 241/514 (46%), Gaps = 41/514 (7%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
+++ + G N L +++H + K+GFD E ++ + L+++Y + +A K+F D+
Sbjct: 12 TYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDI 71
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI-LG 261
+V WN +I L + + L L+ M + V P+++TF V+ +C+G + +
Sbjct: 72 PSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVT 131
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
+ IHAK+I + V + L+D Y+K +++ A L F + K+ VSW A+I G +
Sbjct: 132 EQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQN 191
Query: 322 S-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVL 376
+I L ++ + P + FS VL + +L QLH I++ G + +V
Sbjct: 192 GREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVC 251
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
+L+T Y++ G N+IA ++ S++ R D
Sbjct: 252 NALVTLYSRWG---------------------NLIAA-----------EQIFSKMHRRDR 279
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
+S+N +I+ A G L+LF+ M+ + PD T SLLSAC+ + G LH
Sbjct: 280 ISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSY 339
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
+ K +SSD + L+D+Y KC I ++ + F NV+ W ++ A G G
Sbjct: 340 VIKMG-MSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSE 398
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
+ F +M+ G P++ ++L C G + G ++ ++ +S G + + ++
Sbjct: 399 SYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKS-GFQFNVYVCSVLI 457
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
D+ ++G L A I+ + + + W + G
Sbjct: 458 DMYAKHGELDTARGILQRLR-EEDVVSWTAMIAG 490
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 200/414 (48%), Gaps = 41/414 (9%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N T++++ C + + K +HA++ K+ + + +GS L+D Y ++ A F
Sbjct: 9 NVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLF 68
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRS----SLAF 355
+I + N+ WN +I G +K + + L L+ P+E TF+ VLR+ F
Sbjct: 69 DDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPF 128
Query: 356 QLL-QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q+ Q+H II G+ + V L+ Y+K+G + A L + +V +I+G+
Sbjct: 129 QVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGL 188
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+ NG E + LF M + + P Y F
Sbjct: 189 --------------------------------SQNGREDEAILLFCQMHKSAVIPTPYVF 216
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S+LSAC+K+ LG LHG I K +SS+TFVCN L+ +Y + G++ ++ +IF++M
Sbjct: 217 SSVLSACTKIELFKLGEQLHGFIVKWG-LSSETFVCNALVTLYSRWGNLIAAEQIFSKMH 275
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
R+ I++ +LIS L GF+ RAL+ F +M+ KPD V + ++L+AC G +G +
Sbjct: 276 RRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQ 335
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
L + + G+ ++ ++DL V+ ++ A + T N ++W L
Sbjct: 336 LHSYVIK-MGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTE-TENVVLWNVML 387
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
MP++NVVS+N++I+ YS+ GY +A+ +F M G P TF G+LS C + V EG
Sbjct: 678 MPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEG 737
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
S+ K ++ L GR L E+MP + W +++S
Sbjct: 738 LSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACT 797
Query: 118 KHGFVE 123
H +E
Sbjct: 798 VHKNIE 803
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 204/657 (31%), Positives = 343/657 (52%), Gaps = 12/657 (1%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQA 63
+VV++N++I+ Y + E+A +F M+ G P FTF L C +L +G +
Sbjct: 240 SVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVH 299
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDE--VVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
S L F D FVG AL+ +Y + C DE + VF++M ++ VTWNSI+S + G
Sbjct: 300 SKLIACGFKGDTFVGNALIDMYAK--CDDEESCLKVFDEMGERNQVTWNSIISAEAQFGH 357
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
D + LF + S + ++ + D+ G ++HG +++N + ++++ ++
Sbjct: 358 FNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSA 417
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVFP 240
LV+MY +C + A ++F+ + R+ VS+N ++ + +ALELY M S D + P
Sbjct: 418 LVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQP 477
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+Q TF ++ CA +N G+ IHA +I+ + ++ V + LV Y++C L A F
Sbjct: 478 DQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIF 537
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ 359
+ ++ +N SWN++I GY L + +QL G +P+ F+ S +L S ++ Q
Sbjct: 538 NRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQ 597
Query: 360 ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
LH I+R E + L+ YAK G + A V I + V+ N++ +
Sbjct: 598 KGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWK-VYDQTIKKDVILNNVMVSAF 656
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+G+ N+ L Q+E+ + WN ++A A+ G KE F M + I D T V
Sbjct: 657 VNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMV 716
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
++++ CS L L G LH LI K ++ + L+DMY KCG+I + +F+ M
Sbjct: 717 TIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNG 776
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+N+++W A+IS +G ++ AL + EM G P+ V +A+L+AC H GLV EG+ +
Sbjct: 777 KNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRI 836
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M Y +E + +HY C+VDLL R G L++A++ + MP P W L C+
Sbjct: 837 FTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACR 893
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 174/607 (28%), Positives = 306/607 (50%), Gaps = 46/607 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP+RN+ ++N++I AY+R + LR++ M G +FTF ++ +C ++ + G
Sbjct: 135 MPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGV 194
Query: 60 -QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QLQ+SV+K GL C + FVG AL+ Y R G +D+ V+ +++ S+VTWN++++ + K
Sbjct: 195 RQLQSSVVKAGLNC-NLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVK 253
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
E+ +F +++ V +F + + + G+Q+H +I GF + V
Sbjct: 254 ILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFV 313
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L++MY +C S K+F ++ R+ V+WN+II A A+ +F AL L+LRM
Sbjct: 314 GNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGY 373
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N+ ++ + AGL + G+ +H +++N L D+ +GSALVD Y+KC +E AH
Sbjct: 374 KSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQ 433
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL--GYRPNEFTFSHVL----RSS 352
F + +N VS+NAL+ GY + L +Q G +P++FTF+ +L
Sbjct: 434 VFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQR 493
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
Q Q+H +IR NI + ++ +
Sbjct: 494 NDNQGRQIHAHLIRA--------------------------------NITKNIIVETELV 521
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y+ G+ N ++ +++ + SWN +I NG+ +E L LFK M+ I PD +
Sbjct: 522 HMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCF 581
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+ S+LS+C L + G LH I + + + + +L+DMY KCGS+ + K++++
Sbjct: 582 SLSSMLSSCVSLSDSQKGRELHNFIVRN-TMEEEGILQVVLVDMYAKCGSMDYAWKVYDQ 640
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
++VI ++SA +G A A F +ME + + ++L + GL +E
Sbjct: 641 TIKKDVILNNVMVSAFVNSGRANDAKNLFDQME----QRNTALWNSILAGYANKGLKKES 696
Query: 593 MELFERM 599
F M
Sbjct: 697 FNHFLEM 703
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 164/591 (27%), Positives = 288/591 (48%), Gaps = 46/591 (7%)
Query: 51 DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVV---SVFEDMPRKSLV 107
DS + G + ++ NG + DA++ T +L LY R GCLD++ +FE+MP ++L
Sbjct: 83 DSNSFQRGKSIHTQMISNG-YNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLT 141
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLV 167
WN+++ + + + + L+ + S + +F VI +D+ Q+ V
Sbjct: 142 AWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSV 201
Query: 168 IKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKAL 227
+K G + L V +LV+ Y + + A ++E VV+WN +I + ++ +A
Sbjct: 202 VKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAW 261
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
++ RM V P+ TF + C L++ GK +H+K+I + D FVG+AL+D Y
Sbjct: 262 GIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMY 321
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFS 346
AKCD+ E F E+ +N V+WN++I A ++ L + + + GY+ N F
Sbjct: 322 AKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLG 381
Query: 347 HVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGS-LMTSYAKSGLISDALAFVTALNI 401
+L +S + +LH ++R N + +LGS L+ Y+K G++ +A +L
Sbjct: 382 SILMASAGLADIGKGRELHGHLVR-NLLNSDIILGSALVDMYSKCGMVEEAHQVFRSL-- 438
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
LER + VS+N ++A G +E LEL+
Sbjct: 439 -----------------------------LERNE-VSYNALLAGYVQEGKAEEALELYHD 468
Query: 462 MRAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M++ I PD +TF +LL+ C+ N G +H + + I+ + V L+ MY +C
Sbjct: 469 MQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRAN-ITKNIIVETELVHMYSEC 527
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
G + + +IFN M +RN +W ++I NG Q AL F++M+ G KPD +L ++L
Sbjct: 528 GRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSML 587
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
++C ++G EL + R+ +E E +VD+ + G + A K+
Sbjct: 588 SSCVSLSDSQKGRELHNFIVRNT-MEEEGILQVVLVDMYAKCGSMDYAWKV 637
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/524 (25%), Positives = 255/524 (48%), Gaps = 54/524 (10%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA---GIWSAEKMFK 200
+ +I + + G+ IH +I NG++ + + ++ +Y + + A K+F+
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
++ R++ +WNT+I A A +++ + L LY RM F ++ TF VI +C +++
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGG 193
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
+ + + V+K L C++FVG ALVD YA+ ++ A EI ++V+WNA+I GY
Sbjct: 194 VRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVK 253
Query: 321 KSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYV 375
S + + + +L++G P+ FTF+ LR A + Q+H +I G++ +V
Sbjct: 254 ILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFV 313
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
+L+ YAK L +++ G+ N+
Sbjct: 314 GNALIDMYAKCDDEESCLK-------------------VFDEMGERNQ------------ 342
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
V+WN +I+A A G + + L LF M+ + + + S+L A + L ++ G LHG
Sbjct: 343 -VTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHG 401
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
+ + +++SD + + L+DMY KCG + + ++F + +RN +++ AL++ G A+
Sbjct: 402 HLVRN-LLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAE 460
Query: 556 RALEKFREMEFL-GFKPDRVALIAVLTACRHGGLVREGMELFERMNRS-----YGVEPEM 609
ALE + +M+ G +PD+ +LT C + +G ++ + R+ VE E+
Sbjct: 461 EALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETEL 520
Query: 610 DHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
H + G L A++I M NA W + +EG Q+
Sbjct: 521 VH------MYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEGYQQ 557
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 198/434 (45%), Gaps = 46/434 (10%)
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
K ++ + + D+ N + +I C + GKSIH ++I N D ++ + ++
Sbjct: 57 KPTSIHTKPASDV---NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKIL 113
Query: 285 DFYAKC---DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRP 340
YA+ D+L A F E+ +N+ +WN +IL YA + L ++ G
Sbjct: 114 MLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFS 173
Query: 341 NEFTFSHVLRSSLAFQ----LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
++FTF V+++ +A + + QL +++ G +V G+L+ YA+ G + DA
Sbjct: 174 DKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDA---- 229
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
V L ++E +V+WN VIA ++E
Sbjct: 230 ----------------------------VTSLDEIEGTSVVTWNAVIAGYVKILSWEEAW 261
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
+F M + PDN+TF S L C L + G +H + DTFV N LIDM
Sbjct: 262 GIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACG-FKGDTFVGNALIDM 320
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y KC S +K+F+EM +RN +TW ++ISA G AL F M+ G+K +R L
Sbjct: 321 YAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNL 380
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
++L A + +G EL + R+ + ++ +VD+ + G ++EA ++ ++
Sbjct: 381 GSILMASAGLADIGKGRELHGHLVRNL-LNSDIILGSALVDMYSKCGMVEEAHQVFRSL- 438
Query: 637 FPPNALIWRTFLEG 650
N + + L G
Sbjct: 439 LERNEVSYNALLAG 452
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
M +N+VS+N++IS YS+ G ++AL ++ M +G P + TF +LS C V EG
Sbjct: 774 MNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEG 833
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIV 113
++ S+ ++ A A T ++ L GR G L++ E MP + TW +++
Sbjct: 834 LRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALL 889
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 213/657 (32%), Positives = 347/657 (52%), Gaps = 39/657 (5%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-------SCDSLNPV 56
R+ +NS+ A + G +ALR++ M+ G P TF L ++ +P
Sbjct: 69 RSAFLWNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPA 128
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+GA+L A+ L+ GL AD F G L+ Y G + VF++MP + +V+WNS+VS
Sbjct: 129 KGAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSAL 188
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+G +ED ++RS + + +S V V+ E+D FG +HGLV+K+G D +
Sbjct: 189 LTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVV 248
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ N+LV+MY + + S+ ++F ++ ++ VSWN+ +G A + LE++ MS
Sbjct: 249 NLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEH 308
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P T ++ + L LGK +H I+ A+E D+F+ ++L+D YAK LE A
Sbjct: 309 EVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKA 368
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF 355
F I +N+VSWNA+I A + T F L+IE+ + G PN FT ++L +
Sbjct: 369 SAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPAC--- 425
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
++MG + + + + L+SD FV+ N + +Y
Sbjct: 426 ----SRVASVKMGKQIHAWSI--------HRSLMSD--LFVS-----------NALIDVY 460
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ GQ + + + E+ D VS+N +I + + E L LF+ MR+A I D +F+
Sbjct: 461 AKCGQLSVAQDIFDRSEKDD-VSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFM 519
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
LSAC+ L G +HG++ + ++++ F+ N L+D+Y K G + ++ KIFN +T
Sbjct: 520 GCLSACANLSAFKQGKEIHGVLVR-RLLNTHPFLANSLLDLYTKGGMLATASKIFNRITR 578
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
++V +W +I G++G A E F M+ G D V+ IAVL+AC HGGLV G +
Sbjct: 579 KDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKY 638
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F +M + ++P+ HY C+VDLL R G L E+ +IIT MPFP N+ +W L C+
Sbjct: 639 FSQM-IAQNIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPANSDVWGALLGSCR 694
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 165/587 (28%), Positives = 281/587 (47%), Gaps = 68/587 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP R++VS+NS++SA G +EDA R + M+ G + ++ EG
Sbjct: 173 MPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFG 232
Query: 61 LQAS--VLKNGLFCADAFV--GTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
L VLK+GL D+ V G AL+ +YG+ G L+ + VF M K+ V+WNS + F
Sbjct: 233 LSVHGLVLKSGL---DSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCF 289
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
GF ED + +F + EV + ++ L + G+++HG I+ + ++
Sbjct: 290 AHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDI 349
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ANSL++MY + + A +F+++E R+VVSWN +I LA++ +A L + M +
Sbjct: 350 FIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKN 409
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
PN T V ++ +C+ + + +GK IHA I +L D+FV +AL+D YAKC L A
Sbjct: 410 GECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVA 469
Query: 297 HLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS---- 351
F S K+ VS+N LI+GY+ S+ S+ L ++ G + +F L +
Sbjct: 470 QDIFDR-SEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANL 528
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
S Q ++H +++R + ++ SL+ Y K G+++ A
Sbjct: 529 SAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATA------------------- 569
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+ I+NR + R D+ SWN +I +G ELF M+ + D+
Sbjct: 570 SKIFNR-------------ITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDH 616
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM---------LIDMYGKCGS 522
+++++LSACS GL+ + + S N+ ++D+ G+ G
Sbjct: 617 VSYIAVLSACSH----------GGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQ 666
Query: 523 IGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
+ SV+I M N W AL+ + ++G A+ A E E++
Sbjct: 667 LSESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELK 713
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 218/475 (45%), Gaps = 41/475 (8%)
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKD--VEIRDVVSWNTIIGALAESENFG 224
++ L +A +L+ Y I SA + + + +R WN++ ALA +
Sbjct: 29 LVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRALASAGLPS 88
Query: 225 KALELYLRMSVDIVFPNQTTFVYVIN-----SCAGLQNSILGKSIHAKVIKNA-LECDVF 278
+AL +Y M V P+ TF + ++ A ++ G +HA ++ L DVF
Sbjct: 89 EALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRGLLLADVF 148
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY 338
G+ LV FYA A F E+ ++IVSWN+L+ S L +L+
Sbjct: 149 AGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLV----------SALLTNGMLEDAK 198
Query: 339 RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
R ++RS + + L ++ G E E S+ KSGL S
Sbjct: 199 R----AVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDS-------V 247
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
+N+ A+V +Y + G ++++ + ++ + VSWN + AH G +++VLE+
Sbjct: 248 VNLGNALVD------MYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEM 301
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMY 517
F+ M + P + T SLL A L LG +HG I++ + SD F+ N L+DMY
Sbjct: 302 FRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRA--MESDIFIANSLMDMY 359
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
K G + + IF + RNV++W A+I+ L NG A EM+ G P+ L+
Sbjct: 360 AKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLV 419
Query: 578 AVLTACRHGGLVREGMELFE-RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+L AC V+ G ++ ++RS + ++ + ++D+ + G L A+ I
Sbjct: 420 NLLPACSRVASVKMGKQIHAWSIHRS--LMSDLFVSNALIDVYAKCGQLSVAQDI 472
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 204/660 (30%), Positives = 344/660 (52%), Gaps = 14/660 (2%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
R+VV++NS+ + Y CG+ + L +F M + T +L C L ++ G ++
Sbjct: 104 RDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEI 163
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V+++G+ D FV +A + Y + C+ E +VF+ MP + +VTWNS+ S + GF
Sbjct: 164 HGFVVRHGMV-EDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGF 222
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + +F E+V V + ++ S+ QDL+ G+ IHG +K+G + V+N+
Sbjct: 223 PQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNA 282
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
LVN+Y C + A+ +F + R+V++WN++ K L ++ M ++ V P+
Sbjct: 283 LVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPD 342
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
++ +C+ L++ GK+IH +K+ + DVFV +ALV+ YA C + A F
Sbjct: 343 PMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFD 402
Query: 302 EISNKNIVSWNALILGYASKSSPTS-IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ- 359
+ ++N+V+WN+L Y + P + + E++ G +P+ T +L + Q L+
Sbjct: 403 LMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKS 462
Query: 360 ---LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
+H +R G +V +L++ YAK + +A V L R V N I Y
Sbjct: 463 GKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREA-QVVFDLIPHREVASWNGILTAYF 521
Query: 417 RTGQYNETVKLLSQLERPDI----VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + + + SQ+ R ++ ++W++VI C N +E +E+F+ M+ PD
Sbjct: 522 TNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDET 581
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T S+L ACS L +G +H + + D N L+DMY KCG + S +F+
Sbjct: 582 TIYSILRACSLSECLRMGKEIHCYVFR-HWKDWDLARTNALVDMYAKCGGLSLSRNVFDM 640
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
M ++V +W +I A G++G + AL F +M KPD VL+AC H LV EG
Sbjct: 641 MPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEG 700
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+++F M+R + VEPE +HY CVVD+ R G L+EA I MP P A+ W+ FL GC+
Sbjct: 701 VQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCR 760
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 159/668 (23%), Positives = 309/668 (46%), Gaps = 72/668 (10%)
Query: 20 GYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVLKNGLFCADAFV 77
G +A++++ RG +P + F + S + ++ Q + G+ +D +
Sbjct: 19 GLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVM-SDVSI 77
Query: 78 GTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEV 137
G A + YG+ C++ VF+D+ + +VTWNS+ + + GF + + +F ++ ++V
Sbjct: 78 GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137
Query: 138 ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEK 197
+ ++ G S+ QDL+ G++IHG V+++G ++ V+++ VN Y +C + A+
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQT 197
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQN 257
+F + RDVV+WN++ K L ++ M +D V P+ T ++++C+ LQ+
Sbjct: 198 VFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQD 257
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
GK+IH +K+ + +VFV +ALV+ Y C + A F + ++N+++WN+L
Sbjct: 258 LKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASC 317
Query: 318 YASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
Y + P + + L G +P+ S +L + + L+
Sbjct: 318 YVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLK----------------S 361
Query: 377 GSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
G + +A K G++ D +N +Y E + + +
Sbjct: 362 GKTIHGFAVKHGMVEDVFVCTALVN-------------LYANCLCVREAQTVFDLMPHRN 408
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
+V+WN + + + G ++ L +F+ M + PD T +S+L ACS L +L G +HG
Sbjct: 409 VVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHG 468
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL------- 548
+ ++ D FVCN L+ +Y KC + + +F+ + R V +W +++A
Sbjct: 469 FAVRHGMV-EDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYE 527
Query: 549 -GLNGFAQ---------------------------RALEKFREMEFLGFKPDRVALIAVL 580
GL F+Q A+E FR+M+ +GFKPD + ++L
Sbjct: 528 KGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSIL 587
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
AC +R G E+ + R + + ++ + +VD+ + G L + + MP +
Sbjct: 588 RACSLSECLRMGKEIHCYVFRHWK-DWDLARTNALVDMYAKCGGLSLSRNVFDMMPI-KD 645
Query: 641 ALIWRTFL 648
W T +
Sbjct: 646 VFSWNTMI 653
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 149/586 (25%), Positives = 289/586 (49%), Gaps = 14/586 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+VV++NS+ S Y CG+ + L +F M+ G +P T +LS C L ++ G
Sbjct: 202 MPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSG 261
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ LK+G+ + FV AL+ LY C+ E +VF+ MP ++++TWNS+ S +
Sbjct: 262 KAIHGFALKHGMV-ENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVN 320
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
GF + + +F E+ + V + ++ S +DL+ G+ IHG +K+G ++ V
Sbjct: 321 CGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFV 380
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LVN+Y C + A+ +F + R+VV+WN++ K L ++ M ++ V
Sbjct: 381 CTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGV 440
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T + ++++C+ LQ+ GK IH +++ + DVFV +AL+ YAKC + A +
Sbjct: 441 KPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQV 500
Query: 299 CFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSL 353
F I ++ + SWN ++ Y +K +++ ++ + + +E T+S V+ ++S
Sbjct: 501 VFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSR 560
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI---SDALAFVTALNIPRAVVPANI 410
+ +++ + MG++ E + S++ + + S + + +V + N
Sbjct: 561 IEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNA 620
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ +Y + G + + + + D+ SWN +I A +G+ KE L LF+ M + + PD
Sbjct: 621 LVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPD 680
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ TF +LSACS + G + + + ++ + ++D+Y + G + +
Sbjct: 681 SATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFI 740
Query: 531 NEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
M + I W A ++ G + L K + P+ A
Sbjct: 741 QRMPMEPTAIAWKAFLA--GCRVYKNVELAKISAKKLFEIDPNGSA 784
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 227/488 (46%), Gaps = 43/488 (8%)
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG + + ++ + + F+ V + +D +Q H + G ++ +
Sbjct: 18 HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+ ++ Y +C + A ++F D+ RDVV+WN++ + L ++ +M ++ V
Sbjct: 78 GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N T ++ C+ LQ+ GK IH V+++ + DVFV SA V+FYAKC + A
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQT 197
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTS-IFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + ++++V+WN+L Y + P + + E++ G +P+ T S +L + Q
Sbjct: 198 VFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQD 257
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L+ G + +A K G++ + V +N + +Y
Sbjct: 258 LK----------------SGKAIHGFALKHGMVEN-------------VFVSNALVNLYE 288
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
E + + ++++WN + + + G ++ L +F+ M + PD S
Sbjct: 289 SCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSS 348
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+L ACS+L +L G ++HG K ++ D FVC L+++Y C + + +F+ M R
Sbjct: 349 ILPACSQLKDLKSGKTIHGFAVKHGMV-EDVFVCTALVNLYANCLCVREAQTVFDLMPHR 407
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-----------H 585
NV+TW +L S GF Q+ L FREM G KPD V ++++L AC H
Sbjct: 408 NVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIH 467
Query: 586 GGLVREGM 593
G VR GM
Sbjct: 468 GFAVRHGM 475
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 195/646 (30%), Positives = 333/646 (51%), Gaps = 13/646 (2%)
Query: 18 RCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQASVLKNGLFCADAF 76
+ G + +A+++ + RG T+G ++ C E ++ L D +
Sbjct: 33 KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
+G +L+ Y + + VF M + +VTW+S+++ + + F + +
Sbjct: 93 LGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
+ +F+ ++ +N LE G +IH +V G + ++ VA +L+ MY +C I A
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVAC 212
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
++F + R+VVSW II A A+ +A ELY +M + PN TFV ++NSC +
Sbjct: 213 EVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPE 272
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
G+ IH+ + + LE D+ V +AL+ Y KC++++ A F +S ++++SW+A+I
Sbjct: 273 ALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIA 332
Query: 317 GYAS-----KSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF----QLLQLHCLIIR 366
GYA K S +F L+E ++ G PN+ TF +LR+ A Q Q+H + +
Sbjct: 333 GYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSK 392
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
+G+E + ++ YAK G I +A + + + VV +Y + G + K
Sbjct: 393 VGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKM-ANKNVVAWTSFLSMYIKCGDLSSAEK 451
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+ S++ ++VSWN++IA A NGD +V EL M+A PD T +++L AC L
Sbjct: 452 VFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAG 511
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L G +H K + SDT V LI MY KCG + + +F++M++R+ + W A+++
Sbjct: 512 LERGKLVHAEAVKLG-LESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLA 570
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
G +G A++ F+ M P+ + L AV++AC GLV+EG E+F M + +
Sbjct: 571 GYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMT 630
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
P HY C+VDLL R G L+EAE+ I +MP P+ +W L C+
Sbjct: 631 PRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACK 676
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/611 (24%), Positives = 289/611 (47%), Gaps = 78/611 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M R+VV+++S+I+AY+ + A F M + EP + TF +L +C++ + +E
Sbjct: 117 MTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKG 176
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ +++K D V TAL+ +Y + G + VF M +++V+W +I+ +H
Sbjct: 177 RKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQH 236
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + L+ +++++ ++ +FV +++ + + L G +IH + + G + +++VA
Sbjct: 237 RKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVA 296
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES-----ENFGKALELYLRMS 234
N+L+ MY +C + A ++F + RDV+SW+ +I A+S E+ + +L RM
Sbjct: 297 NALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMR 356
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA------ 288
+ VFPN+ TF+ ++ +C G+ IHA++ K E D + +A+ + YA
Sbjct: 357 REGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIY 416
Query: 289 -------------------------KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS 323
KC +L A FSE+ +N+VSWN +I GYA
Sbjct: 417 EAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGD 476
Query: 324 PTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGS 378
+F L+ ++ G++P+ T +L + A L+ +H +++G E+ V S
Sbjct: 477 IVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATS 536
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
L+ G+Y++ GQ E + ++ D V+
Sbjct: 537 LI--------------------------------GMYSKCGQVAEARTVFDKMSNRDTVA 564
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
WN ++A +GD E ++LFK M R+ P+ T +++SACS+ + G + +++
Sbjct: 565 WNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQ 624
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FA 554
+ ++ ++D+ G+ G + + + M + ++ W AL+ A + A
Sbjct: 625 EDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLA 684
Query: 555 QRALEKFREME 565
+RA E+E
Sbjct: 685 ERAAHHILELE 695
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 207/659 (31%), Positives = 339/659 (51%), Gaps = 41/659 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
+P+R+VVS+ ++I+ + GY A+ +F M G E +FT+ L +C +E G
Sbjct: 189 IPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFG 248
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A +K G F +D FVG+AL+ LY + G + VF MP+++ V+WN++++ F +
Sbjct: 249 KQVHAEAIKVGDF-SDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQ 307
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E + LFC + SE+ ++ + V+ G +N +L G+ +H L I+ G + + +
Sbjct: 308 MGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFI 367
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ LV+MY +C A K+F +E DVVSW+ II L + +A E++ RM V
Sbjct: 368 SCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGV 427
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PNQ T ++++ L + G+SIHA V K E D V +ALV Y K +++
Sbjct: 428 IPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCR 487
Query: 299 CFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F +N++++SWNAL+ G+ +++ T + + ++L G+ PN +TF +LRS +
Sbjct: 488 VFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSD 547
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ Q+H I++ + ++V +L+ YAK+ + DA L I R + +I
Sbjct: 548 VDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVA 606
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
Y + GQ + VK Q++R + P+ +T
Sbjct: 607 GYAQDGQGEKAVKCFIQMQREG-------------------------------VKPNEFT 635
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
S LS CS++ L G LH + K S D FV + L+DMY KCG + + +F+ +
Sbjct: 636 LASSLSGCSRIATLDSGRQLHSMAIKAG-QSGDMFVASALVDMYAKCGCVEDAEVVFDGL 694
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
R+ ++W +I +G +AL+ F M G PD V I VL+AC H GL+ EG
Sbjct: 695 VSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGK 754
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F +++ YG+ P ++HY C+VD+L R G E E I M N LIW T L C+
Sbjct: 755 KHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACK 813
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 162/612 (26%), Positives = 290/612 (47%), Gaps = 42/612 (6%)
Query: 45 GGLLSCDSLNPV-EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR 103
G L +C S + EG + V+K+G+ D+ + +L+ +Y + G + VF ++P
Sbjct: 133 GMLRTCASKGDLNEGKAIHGQVIKSGIN-PDSHLWNSLVNVYAKCGSANYACKVFGEIPE 191
Query: 104 KSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI 163
+ +V+W ++++ F G+ + LFCE+ R V E ++ + S DLEFG+Q+
Sbjct: 192 RDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQV 251
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H IK G +L V ++LV++Y +C + AE++F + ++ VSWN ++ A+ +
Sbjct: 252 HAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDA 311
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
K L L+ RM+ + ++ T V+ CA N G+ +H+ I+ E D F+ L
Sbjct: 312 EKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCL 371
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNE 342
VD Y+KC A F I + ++VSW+A+I K S + + + G PN+
Sbjct: 372 VDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQ 431
Query: 343 FTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
FT + ++ ++ L +H + + G+E V +L+T Y K G + D
Sbjct: 432 FTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDG------ 485
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
+ NR D++SWN +++ N L +
Sbjct: 486 ---------CRVFEATTNR-----------------DLISWNALLSGFHDNETCDTGLRI 519
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYG 518
F M A P+ YTF+S+L +CS L ++ LG +H I K + +D FV L+DMY
Sbjct: 520 FNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGND-FVGTALVDMYA 578
Query: 519 KCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
K + + IFN + R++ WT +++ +G ++A++ F +M+ G KP+ L +
Sbjct: 579 KNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLAS 638
Query: 579 VLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFP 638
L+ C + G +L M G +M +VD+ + G +++AE + +
Sbjct: 639 SLSGCSRIATLDSGRQL-HSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGL-VS 696
Query: 639 PNALIWRTFLEG 650
+ + W T + G
Sbjct: 697 RDTVSWNTIICG 708
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 159/517 (30%), Positives = 250/517 (48%), Gaps = 50/517 (9%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
+ G++ +++ DL G+ IHG VIK+G + + + NSLVN+Y +C A K+F ++
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 204 IRDVVSWNTII-GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
RDVVSW +I G +AE G A+ L+ M + V N+ T+ + +C+ + GK
Sbjct: 191 ERDVVSWTALITGFVAEGYGSG-AVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGK 249
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
+HA+ IK D+FVGSALVD YAKC + A F + +N VSWNAL+ G+A
Sbjct: 250 QVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMG 309
Query: 323 SPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLG 377
+ L + ++FT S VL+ L+ +H L IR+G E E++
Sbjct: 310 DAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISC 369
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
L+ Y+K GL DAL K+ ++E PD+V
Sbjct: 370 CLVDMYSKCGLAGDAL--------------------------------KVFVRIEDPDVV 397
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SW+ +I G +E E+FK MR + + P+ +T SL+SA + L +L G S+H +
Sbjct: 398 SWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACV 457
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
K D VCN L+ MY K GS+ ++F T+R++I+W AL+S N
Sbjct: 458 CKYG-FEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTG 516
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV-- 615
L F +M GF P+ I++L +C V G ++ ++ V+ +D V
Sbjct: 517 LRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQI-----VKNSLDGNDFVGT 571
Query: 616 --VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
VD+ + L++AE I + + W + G
Sbjct: 572 ALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVAG 607
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 210/662 (31%), Positives = 333/662 (50%), Gaps = 45/662 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
M + NVV + S I+ +R G V+ AL FL M+ G EP T+ +S S P
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L +LK G F FV + L+ +Y +H + E +F+DMP + V+WNS+++ + +
Sbjct: 61 TSLHCLILKKG-FSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQ 119
Query: 119 HGFVEDCMFLFCELVRS----EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
G E+ LFC ++ S ++ +++ + V+ G+ +HG +K GFD
Sbjct: 120 RGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDS 179
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+L V+ S V MY +C + A F +E +D+V+WNT+I A++ +A+EL+ +M
Sbjct: 180 DLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQME 239
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
++ PN TTF V+ + + +S +G+ HAKV+K DVFV +ALVD Y+K ++E
Sbjct: 240 LEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIE 299
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFT----FSHVL 349
F E+S +N+VS+NALI GY+ + LQ G P+ FT FS
Sbjct: 300 DVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCS 359
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
SS + Q+H ++ G ++ V S++ Y+K G AL ++N P +V A
Sbjct: 360 VSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAG 419
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
II+G A NG+ ++ L F MR
Sbjct: 420 IISGF--------------------------------AQNGEGEKALMQFCKMRKFIDKT 447
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D ++ S++ A S + G LH + K+ + +V + +IDMY KCG + + K+
Sbjct: 448 DEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSG-LDCTIYVGSAVIDMYSKCGMVEDAQKV 506
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F+ M ++NV++W ++I+ NGF + AL F+EM G P V + +L AC H GLV
Sbjct: 507 FSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLV 566
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG + M +YG+ P M+H C+VDLL R G+L+EAE + + F IW + L
Sbjct: 567 EEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLS 626
Query: 650 GC 651
C
Sbjct: 627 AC 628
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 209/663 (31%), Positives = 346/663 (52%), Gaps = 46/663 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI-NRGFEPTQFTFGGLL-SCDSLNPVE- 57
M +N++ +N+++S Y+R G D +++F+ ++ + F+P FTF ++ +C + V
Sbjct: 105 METKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRL 164
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + V+K GL D FVG AL+G+YG+ G +DE + VF+ MP +LV+WNS++ F
Sbjct: 165 GEVIHGMVIKMGLVL-DVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFS 223
Query: 118 KHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++GF D L E++ E L + + V ++ + E +++ G IHGL +K G E+
Sbjct: 224 ENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEV 283
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV- 235
+V N++V MY +C + A+ F ++VVSWNT+I A + + +A L M +
Sbjct: 284 MVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQ 343
Query: 236 -DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ + N+ T + V+ +C K +H ++ + V + +A + YAKC L
Sbjct: 344 GEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALN 402
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F I +K + SWNALI G+A P ++ LL ++ G +P+ FT S +L +
Sbjct: 403 SAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACA 462
Query: 354 AFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ LQ +H ++R G E +V SL++ Y G S A
Sbjct: 463 HLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARV--------------- 507
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
L +++ ++VSWN +I+ + NG E L LF+ + I
Sbjct: 508 -----------------LFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQS 550
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
VS+ ACS+L L LG HG + K + + D FV +IDMY K G I S K+
Sbjct: 551 HEIAIVSVFGACSQLSALRLGKEAHGYVLKA-LQTEDAFVGCSIIDMYAKSGCIKESRKV 609
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F+ + D+NV +W A+I A G++G + A+E + M+ +G PDR I +L AC H GLV
Sbjct: 610 FDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLV 669
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG++ F+ M +EP+++HY C++D+L R G L +A +++ MP + IW + L
Sbjct: 670 EEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLR 729
Query: 650 GCQ 652
C+
Sbjct: 730 SCR 732
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 170/613 (27%), Positives = 296/613 (48%), Gaps = 48/613 (7%)
Query: 47 LLSCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS 105
L +C + +E G +L V + + D + T L+ +Y G + VF++M K+
Sbjct: 50 LQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKN 109
Query: 106 LVTWNSIVSIFGKHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIH 164
L+ WN++VS + ++G D + +F +LV ++ +F VI D+ GE IH
Sbjct: 110 LIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIH 169
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
G+VIK G ++ V N+LV MY +C + A K+F + ++VSWN++I A +E+
Sbjct: 170 GMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSR 229
Query: 225 KALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
+ +L + M + + P+ T V ++ CAG +G IH +K L +V V +A+
Sbjct: 230 DSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAM 289
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG---YRP 340
V Y+KC L A + F + +NKN+VSWN +I ++ + F L++ +Q+ +
Sbjct: 290 VYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKA 349
Query: 341 NEFTFSHVLRSSLA----FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
NE T +VL + L L +LH R +++ E + + + +YAK G ++ A
Sbjct: 350 NEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVE-LSNAFILAYAKCGALNSA---- 404
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
+ GI ++T + SWN +I A NGD ++ L
Sbjct: 405 -----------EKVFHGIGDKT-----------------VSSWNALIGGHAQNGDPRKAL 436
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
L M + PD +T SLL AC+ L +L G +HG + + + +D FV L+
Sbjct: 437 HLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNG-LETDFFVGTSLLSH 495
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y CG S+ +F+ M D+N+++W A+IS NG +L FR+ G + +A+
Sbjct: 496 YIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAI 555
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHC-VVDLLVRYGHLKEAEKIITTM 635
++V AC +R G E + ++ ++ E C ++D+ + G +KE+ K+ +
Sbjct: 556 VSVFGACSQLSALRLGKEAHGYVLKA--LQTEDAFVGCSIIDMYAKSGCIKESRKVFDGL 613
Query: 636 PFPPNALIWRTFL 648
N W +
Sbjct: 614 K-DKNVASWNAII 625
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 136/551 (24%), Positives = 251/551 (45%), Gaps = 64/551 (11%)
Query: 137 VALTESSFVGVI-HGLSNEQDLEFGEQIHGLVIKNG-FDYELLVANSLVNMYFQCAGIWS 194
++L +G++ N++D+E G ++H V + + + ++ L+ MY C
Sbjct: 38 ISLQAKEAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLD 97
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF-PNQTTFVYVINSCA 253
+ +F ++E ++++ WN ++ + +G +++++ + D F P+ TF VI +C
Sbjct: 98 SRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACG 157
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
G+ + LG+ IH VIK L DVFVG+ALV Y KC ++ A F + N+VSWN+
Sbjct: 158 GILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNS 217
Query: 314 LILGYASKS-SPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRM 367
+I ++ S S LL+E+L + G P+ T +L + +H L +++
Sbjct: 218 MICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKL 277
Query: 368 GYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
G V +++ Y+K G +++A ++FV N + VV N + ++ G NE
Sbjct: 278 GLSEEVMVNNAMVYMYSKCGYLNEAQMSFVK--NNNKNVVSWNTMISAFSLEGDVNEAFN 335
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
LL +++ ++ + + T +++L AC
Sbjct: 336 LLQEMQ-----------------------------IQGEEMKANEVTILNVLPACLDKLQ 366
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L LHG + + N I Y KCG++ S+ K+F+ + D+ V +W ALI
Sbjct: 367 LRSLKELHGYSFRH--CFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIG 424
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
NG ++AL +M + G +PD + ++L AC H ++ G E+ + R+ G+E
Sbjct: 425 GHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRN-GLE 483
Query: 607 PE-------MDHY-HC--VVDLLVRYGHLKEAEKII----------TTMPFPPNALIWRT 646
+ + HY HC V + +K+ + +P+ AL ++
Sbjct: 484 TDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKS 543
Query: 647 FLEGCQRCRIA 657
EG Q IA
Sbjct: 544 LSEGIQSHEIA 554
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 207/658 (31%), Positives = 351/658 (53%), Gaps = 40/658 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLL-SCDSLNPVEGAQL 61
+N+ +N+I+SAY+R EDA+ +F +I+ +P FT ++ +C L + Q+
Sbjct: 63 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 122
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ +D FVG AL+ +YG+ G ++E V VFE MP ++LV+WNSI+ F ++GF
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGF 182
Query: 122 VEDCMFLFCELVRSEVALTE--SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+++ F E++ E + ++ V V+ + E+D+E G +HGL +K G + EL+V
Sbjct: 183 LQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVN 242
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD--I 237
NSL++MY +C + A+ +F + +++VSWN++IG A E+ + L +M +
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAK 302
Query: 238 VFPNQTTFVYVINSCAGLQNSILG--KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ ++ T + V+ C L+ S L K +H ++ L+ + V +A + Y +C L
Sbjct: 303 MKADEFTILNVLPVC--LERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCS 360
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
+ F + K + SWNAL+ GYA S P ++ L +++ G P+ FT +L +
Sbjct: 361 SERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLA--C 418
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
++ LH G E + + L ++GL D ++ L++
Sbjct: 419 SRMKSLH-----YGEEIHGFAL--------RNGLAVDPFIGISLLSL------------- 452
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y G+ L +E +VSWN++IA + NG E + LF+ M + I P
Sbjct: 453 YICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAI 512
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+ + ACS+L L LG LH K + + D FV + +IDMY K G IG S +IF+ +
Sbjct: 513 MCVCGACSQLSALRLGKELHCFALKAHL-TEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR 571
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+++V +W +I+ G++G + ALE F +M LG KPD +L AC H GLV +G+E
Sbjct: 572 EKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLE 631
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F +M + +EP+++HY CVVD+L R G + +A ++I MP P++ IW + L C+
Sbjct: 632 YFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCR 689
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 163/561 (29%), Positives = 273/561 (48%), Gaps = 46/561 (8%)
Query: 47 LLSCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS 105
L +C +E G +L V + FC D + T ++ +Y G + VF+ + RK+
Sbjct: 5 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 64
Query: 106 LVTWNSIVSIFGKHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIH 164
L WN+IVS + ++ ED M +F EL+ +E + VI + DL G+ IH
Sbjct: 65 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 124
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
G+ K ++ V N+L+ MY +C + A K+F+ + R++VSWN+II +E+
Sbjct: 125 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQ 184
Query: 225 KALELYLRMSV--DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSA 282
++ + M V + P+ T V V+ CAG ++ G ++H +K L ++ V ++
Sbjct: 185 ESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNS 244
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL---GYR 339
L+D Y+KC L A L F + KNIVSWN++I GYA + F L++ +Q +
Sbjct: 245 LIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMK 304
Query: 340 PNEFTFSHVL-----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
+EFT +VL RS L L +LH R G ++ E V A A
Sbjct: 305 ADEFTILNVLPVCLERSELQ-SLKELHGYSWRHGLQSNELV----------------ANA 347
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
F+ A Y R G + ++ ++ + SWN ++ A N D ++
Sbjct: 348 FIAA----------------YTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRK 391
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
L+L+ M + + PD +T SLL ACS++ +L G +HG + ++ D F+ L+
Sbjct: 392 ALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNG-LAVDPFIGISLL 450
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
+Y CG ++ +F+ M R++++W +I+ NG A+ FR+M G +P +
Sbjct: 451 SLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEI 510
Query: 575 ALIAVLTACRHGGLVREGMEL 595
A++ V AC +R G EL
Sbjct: 511 AIMCVCGACSQLSALRLGKEL 531
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 158/604 (26%), Positives = 288/604 (47%), Gaps = 64/604 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI--NRGFEPTQFTFGGLLS-CDSLNPVE 57
MP+RN+VS+NSII +S G+++++ F M+ F P T +L C +E
Sbjct: 162 MPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIE 221
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G + +K GL + V +L+ +Y + L E +F+ +K++V+WNS++ +
Sbjct: 222 KGMAVHGLAVKLGLN-EELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGY 280
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSF--VGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ V +L ++ + + F + V+ +L+ +++HG ++G
Sbjct: 281 AREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQS 340
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
LVAN+ + Y +C + S+E++F ++ + V SWN ++ A++ + KAL+LYL+M+
Sbjct: 341 NELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMT 400
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ P+ T ++ +C+ +++ G+ IH ++N L D F+G +L+ Y C
Sbjct: 401 DSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPF 460
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A + F + ++++VSWN +I GY+ P +I L ++L G +P E V +
Sbjct: 461 AAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACS 520
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
L +LHC ++ +V S++ YAK G I
Sbjct: 521 QLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCI-------------------- 560
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
G+ R + +L D+ SWN++IA +G KE LELF+ M + P
Sbjct: 561 ---GLSQR---------IFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKP 608
Query: 470 DNYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
D++TF +L ACS + G +LH + K E + C ++DM G+ G
Sbjct: 609 DDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLE-----HYTC--VVDMLGRAGR 661
Query: 523 IGSSVKIFNEMT-DRNVITWTALISALGLN---GFAQRALEKFREMEFLGFKPDRVALIA 578
I ++++ EM D + W++L+S+ ++ G ++ K E+E KP+ LI+
Sbjct: 662 IDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELE--PEKPENYVLIS 719
Query: 579 VLTA 582
L A
Sbjct: 720 NLFA 723
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 5/176 (2%)
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LL AC + ++ +G LH ++ + +D + +I MY CGS S +F+++ +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 537 NVITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLVREGM-E 594
N+ W A++SA N + A+ F E+ KPD L V+ AC GL+ G+ +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLGLGQ 121
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ M + ++ + ++ + + G ++EA K+ MP N + W + + G
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP-ERNLVSWNSIICG 176
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 204/660 (30%), Positives = 347/660 (52%), Gaps = 47/660 (7%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS------LNP 55
P + + N ++ +SR ++AL +FL + R PT G LSC +
Sbjct: 53 PQQGLSRNNHLLFEFSRNDQNKEALNLFLGL-RRSGSPTD---GSSLSCVLKVCGCLFDR 108
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
+ G Q+ +K G F D VGT+L+ +Y + +++ VF++M K++V+W S+++
Sbjct: 109 IVGKQVHCQCIKCG-FVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ ++G E + LF ++ + +F V+ GL+ + +E G Q+H +VIK+G D
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V NS+VNMY + + A+ +F +E R+ VSWN++I + +A EL+ RM +
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ V QT F VI CA ++ K +H +VIKN + D+ + +AL+ Y+KC ++
Sbjct: 288 EGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDD 347
Query: 296 AHLCFSEISN-KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F + +N+VSW A+I GY + ++ L ++ + G RPN FT+S +L ++
Sbjct: 348 AFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANA 407
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
A Q+H L+++ YEN V +L SY+K I DA
Sbjct: 408 AVSPSQIHALVVKTNYENSPSVGTALSDSYSK---IGDA--------------------- 443
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
NE K+ ++ DIV+W+ +++ A GD + +++F + + P+ +T
Sbjct: 444 --------NEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFT 495
Query: 474 FVSLLSACS-KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
F S+L+AC+ ++ G H K+ S+ V + L+ MY K G+I S+ ++F
Sbjct: 496 FSSVLNACAAPTASVEQGKQFHSCSIKSGF-SNALCVSSALVTMYAKRGNIESANEVFKR 554
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
DR++++W ++IS +G +++L+ F EM + D + I V++AC H GLV EG
Sbjct: 555 QVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEG 614
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+ M + Y + P M+HY C+VDL R G L++A +I MPFP A IWRT L C+
Sbjct: 615 QRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACR 674
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 206/412 (50%), Gaps = 15/412 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M +RN VS+NS+I+ + G +A +F M G + TQ F ++ C ++ + A
Sbjct: 254 MENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFA 313
Query: 60 -QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-KSLVTWNSIVSIFG 117
QL V+KNG D + TAL+ Y + +D+ +F M +++V+W +I+S +
Sbjct: 314 KQLHCQVIKNGSDF-DLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYV 372
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G + M LFC++ R V ++ ++ + QIH LV+K ++
Sbjct: 373 QNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSP----SQIHALVVKTNYENSPS 428
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V +L + Y + A K+F+ ++ +D+V+W+ ++ A+ + A++++L+++ +
Sbjct: 429 VGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEG 488
Query: 238 VFPNQTTFVYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN+ TF V+N+CA S+ GK H+ IK+ + V SALV YAK N+E A
Sbjct: 489 VEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESA 548
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
+ F ++++VSWN++I GYA S+ + E+ + TF V+ +
Sbjct: 549 NEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHA 608
Query: 356 QLLQLHCLIIRMGYENYEYV-----LGSLMTSYAKSGLISDALAFVTALNIP 402
L+ + ++Y V ++ Y+++G++ A+ + + P
Sbjct: 609 GLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFP 660
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 213/664 (32%), Positives = 341/664 (51%), Gaps = 50/664 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG------GLLSCDSLN 54
MPDRNVVS+ S++ YS G E+ + ++ M G E + + GLL +SL
Sbjct: 221 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESL- 279
Query: 55 PVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
G Q+ V+K+GL A V +L+ ++G G +D +F + + ++WNSIV+
Sbjct: 280 ---GRQIIGQVIKSGLESKLA-VENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVA 335
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ ++G +E+ +F + R + ++ ++ L + ++G IHGLV+K GFD
Sbjct: 336 AYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDS 395
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ V N+L+ MY A+ +FK + +D++SWN+++ + AL + M
Sbjct: 396 VVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMI 455
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
N TF + +C + G+ +H V+ + L + +G+ALV Y K +
Sbjct: 456 RTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMS 515
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSL 353
+ ++ +++V+WNALI GYA P + L++ G N T VL + L
Sbjct: 516 TSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACL 575
Query: 354 A-FQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
LL+ LH I+ G+E+ E+V SL+T YAK G +S +
Sbjct: 576 VPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSS---------------Q 620
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
++ G+ NR+ I++WN ++AA AH+G +EVL+L MR+ +
Sbjct: 621 DLFNGLDNRS-----------------IITWNAILAANAHHGHGEEVLKLVSKMRSFGLS 663
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
D ++F LSA +KL L G LHGL K D F+ N DMY KCG IG VK
Sbjct: 664 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF-ELDCFIFNAAADMYSKCGEIGEVVK 722
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+ +R++ +W LISALG +G+ + E F EM +G KP V +++LTAC HGGL
Sbjct: 723 MLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGL 782
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
V +G+ ++ + + +G+EP ++H CV+DLL R G L EAE I+ MP PN L+WR+ L
Sbjct: 783 VDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLL 842
Query: 649 EGCQ 652
C+
Sbjct: 843 ASCK 846
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 137/579 (23%), Positives = 267/579 (46%), Gaps = 38/579 (6%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G L A +K GL L+ +Y + G + +F+ MP ++ V+WN+++S
Sbjct: 77 GRALHALCVK-GLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIV 135
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFV--GVIHGLSNEQDL-EFGEQIHGLVIKNGFDY 174
+ G + M F ++ ++ + SSFV ++ + G Q+HG V K+G
Sbjct: 136 RVGLYLEGMEFFQKMC--DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLS 193
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ V+ +++++Y + + K+F+++ R+VVSW +++ ++ + +++Y M
Sbjct: 194 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMR 253
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ V N+ + VI+SC L++ LG+ I +VIK+ LE + V ++L+ + N++
Sbjct: 254 GEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVD 313
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A+ F++IS ++ +SWN+++ YA H+ SS
Sbjct: 314 YANYIFNQISERDTISWNSIVAAYAQN------------------------GHIEESSRI 349
Query: 355 FQLL-QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
F L+ + H + VLG + G+ V + V N +
Sbjct: 350 FNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGI----HGLVVKMGFDSVVCVCNTLLR 405
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y G+ E + Q+ D++SWN ++A+ ++G + L + M + T
Sbjct: 406 MYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVT 465
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F S L+AC G LHGL+ + + + + N L+ MYGK G + +S ++ +M
Sbjct: 466 FTSALAACFSPEFFDKGRILHGLVVVSGLF-DNQIIGNALVSMYGKIGGMSTSRRVLLQM 524
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-HGGLVREG 592
R+V+ W ALI N +AL F+ + G + + +++VL+AC G L+ G
Sbjct: 525 PRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERG 584
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
L + S G E + + ++ + + G L ++ +
Sbjct: 585 KPLHAYI-VSAGFESDEHVKNSLITMYAKCGDLSSSQDL 622
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 212/656 (32%), Positives = 334/656 (50%), Gaps = 42/656 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEG 58
MP+RNVVS+ +++ A S GY+E+ALR + M G F ++S C SL N V G
Sbjct: 105 MPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPG 164
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + V+ +GL V +L+ ++G G + + +F+ M ++WN+++S++
Sbjct: 165 LQVASQVIVSGLQ-NQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSH 223
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G C +F ++ + ++ ++ ++ G IH L +++ D + V
Sbjct: 224 QGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTV 283
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LVNMY + AE +F ++ RD++SWNT+I + ++ N AL+ ++
Sbjct: 284 INALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNE 343
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN TF + +C+ I GK +HA V++ +L+ ++ VG++L+ Y KC+++E A
Sbjct: 344 SPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEK 403
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQL 357
F + +IVS+N LI GYA T + ++ G +PN T ++ S +
Sbjct: 404 VFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSND 463
Query: 358 LQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L LH IIR G+ + EYV SL+T YAK G + + NI
Sbjct: 464 LHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESS---------------TNIFN 508
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
I N+ +IVSWN +IAA G +E L+LF M+ A D
Sbjct: 509 SITNK-----------------NIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRV 551
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
LS+C+ L +L G LHGL K+ + SD++V N +DMYGKCG + +++ +
Sbjct: 552 CLAECLSSCASLASLEEGMQLHGLGMKSGL-DSDSYVVNAAMDMYGKCGKMDEMLQVVPD 610
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
R W LIS G+ + A E F++M G KPD V +A+L+AC H GLV +G
Sbjct: 611 QAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKG 670
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
++ + M S+GV P + H C+VDLL R G EAEK I MP PN LIWR+ L
Sbjct: 671 IDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLL 726
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 177/661 (26%), Positives = 317/661 (47%), Gaps = 47/661 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEG- 58
M DR ++ + +S RCG A M M RG + F L++ C+ EG
Sbjct: 1 MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 59 ---AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
A + A + GL + ++GTALL LYG G + + +F +MP +++V+W +++
Sbjct: 61 ACGAAIHALTHRAGLM-GNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVA 119
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+G++E+ + + ++ R V ++F V+ + ++ G Q+ VI +G +
Sbjct: 120 LSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQ 179
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ VANSL+ M+ + AEK+F +E D +SWN +I + K ++ M
Sbjct: 180 VSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRH 239
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ P+ TT +++ CA + G IH+ ++++L+ V V +ALV+ Y+ L
Sbjct: 240 HGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSD 299
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F +S ++++SWN +I Y + T ++ L +L PN TFS L + +
Sbjct: 300 AEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSS 359
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
L +H +++++ + V SL+T Y K + DA
Sbjct: 360 PGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDA------------------ 401
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
K+ + DIVS+N++I A D + +++F +MR+A I P+
Sbjct: 402 --------------EKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPN 447
Query: 471 NYTFVSLLSACSKLCNLA-LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
T +++ + + +L G LH I +T + SD +V N LI MY KCG++ SS I
Sbjct: 448 YITMINIHGSFASSNDLHNYGRPLHAYIIRTGFL-SDEYVANSLITMYAKCGNLESSTNI 506
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
FN +T++N+++W A+I+A G + AL+ F +M+ G K DRV L L++C +
Sbjct: 507 FNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASL 566
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EGM+L +S G++ + + +D+ + G + E +++ P W T +
Sbjct: 567 EEGMQLHGLGMKS-GLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQ-CWNTLIS 624
Query: 650 G 650
G
Sbjct: 625 G 625
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 217/730 (29%), Positives = 359/730 (49%), Gaps = 83/730 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCD----SLNP 55
MP+R + ++N +I + + + +F+ M++ P + TF G+L +C + +
Sbjct: 106 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 165
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
VE Q+ A +L GL + V L+ LY R+G +D VF+ + K +W +++S
Sbjct: 166 VE--QIHARILYQGLRDS-TVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 222
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
K+ + + LFC++ + T +F V+ + LE GEQ+HGLV+K GF +
Sbjct: 223 LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 282
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V N+LV++YF + SAE +F ++ RD V++NT+I L++ KA+EL+ RM +
Sbjct: 283 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL 342
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D + P+ T ++ +C+ G+ +HA K + + AL++ YAKC ++E
Sbjct: 343 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 402
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLA 354
A F E +N+V WN +++ Y + F + +Q+ PN++T+ +L++ +
Sbjct: 403 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 462
Query: 355 ------------------FQLLQLHC------------------LIIRM----------- 367
FQL C ++IR
Sbjct: 463 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 522
Query: 368 --GYENYEYVLGSLMT--SYAKSGLISDALAFVTALNI--------------PRAVVPA- 408
GY Y + +L T G+ SD + A++ +A V
Sbjct: 523 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 582
Query: 409 -------NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
N + +Y+R G+ E+ Q E D ++WN +++ +G+ +E L +F
Sbjct: 583 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 642
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M I +N+TF S + A S+ N+ G +H +I KT S+T VCN LI MY KCG
Sbjct: 643 MNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGY-DSETEVCNALISMYAKCG 701
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
SI + K F E++ +N ++W A+I+A +GF AL+ F +M +P+ V L+ VL+
Sbjct: 702 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 761
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC H GLV +G+ FE MN YG+ P+ +HY CVVD+L R G L A++ I MP P+A
Sbjct: 762 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 821
Query: 642 LIWRTFLEGC 651
L+WRT L C
Sbjct: 822 LVWRTLLSAC 831
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 162/629 (25%), Positives = 285/629 (45%), Gaps = 45/629 (7%)
Query: 34 NRGFEPTQFTFGGLLS-CDSLNPV--EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGC 90
NRG P T LL C N EG +L + +LK GL ++ + L Y G
Sbjct: 37 NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGL-DSNGCLSEKLFDFYLFKGD 95
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG 150
L VF++MP +++ TWN ++ + + LF +V V E +F GV+
Sbjct: 96 LYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA 155
Query: 151 LSNEQ-DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
+ EQIH ++ G +V N L+++Y + + A ++F + ++D S
Sbjct: 156 CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 215
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
W +I L+++E +A+ L+ M V + P F V+++C +++ +G+ +H V+
Sbjct: 216 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 275
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFL 329
K D +V +ALV Y NL A FS +S ++ V++N LI G +
Sbjct: 276 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 335
Query: 330 LIELLQL-GYRPNEFTFSHVLRSSLA----FQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
L + + L G P+ T + ++ + A F+ QLH ++G+ + + G+L+ YA
Sbjct: 336 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 395
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
K I AL + + E ++V WN+++
Sbjct: 396 KCADIETALDYFL--------------------------------ETEVENVVLWNVMLV 423
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
A D + +F+ M+ I P+ YT+ S+L C +L +L LG +H I KT
Sbjct: 424 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF-Q 482
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
+ +VC++LIDMY K G + ++ I ++V++WT +I+ F +AL FR+M
Sbjct: 483 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 542
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
G + D V L ++AC ++EG ++ + S G ++ + +V L R G
Sbjct: 543 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSRCGK 601
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEGCQR 653
++E+ N + W + G Q+
Sbjct: 602 IEESYLAFEQTEAGDN-IAWNALVSGFQQ 629
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 156/623 (25%), Positives = 287/623 (46%), Gaps = 57/623 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
M R+ V++N++I+ S+CGY E A+ +F M G EP T L+ S + G
Sbjct: 309 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 368
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A K G F ++ + ALL LY + ++ + F + +++V WN ++ +G
Sbjct: 369 QQLHAYTTKLG-FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 427
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + +F ++ E+ + ++ ++ DLE GEQIH +IK F V
Sbjct: 428 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 487
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ L++MY + + +A + +DVVSW T+I + KAL + +M +
Sbjct: 488 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 547
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
++ +++CAGLQ G+ IHA+ + D+ +ALV Y++C +E ++L
Sbjct: 548 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 607
Query: 299 CFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF-- 355
F + + ++WNAL+ G+ S ++ ++ + + + + G N FTF ++++
Sbjct: 608 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 667
Query: 356 --QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q Q+H +I + GY++ V +L++ YAK G ISDA
Sbjct: 668 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA--------------------- 706
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
K ++ + VSWN +I A + +G E L+ F M + + P++ T
Sbjct: 707 -----------EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 755
Query: 474 FVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
V +LSACS + + G +S +GL K E +VC ++DM + G + +
Sbjct: 756 LVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE-----HYVC--VVDMLTRAGLLSRA 808
Query: 527 VKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ EM + + + W L+SA ++ + +F L +P+ A +L+
Sbjct: 809 KEFIQEMPIKPDALVWRTLLSACVVH--KNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 866
Query: 586 GGLVREGMELFERMNRSYGVEPE 608
+ +L + + GV+ E
Sbjct: 867 VSKKWDARDLTRQKMKEKGVKKE 889
>gi|302769798|ref|XP_002968318.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
gi|300163962|gb|EFJ30572.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
Length = 666
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 205/634 (32%), Positives = 335/634 (52%), Gaps = 21/634 (3%)
Query: 36 GFEPTQFTF-GGLLSCDSLNPVEGAQ-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDE 93
G P +F L SC + + + + V+++GL + VG AL+ +YG+ G L
Sbjct: 1 GLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQIS-VGNALVNMYGKCGSLAL 59
Query: 94 VVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLS 152
VF+ M + +++WN++++ + + G ++ M LF + +S +FV V+
Sbjct: 60 AREVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACC 119
Query: 153 NEQDLEFGEQIHGLVIKNGF-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
+ LE G++I LV + G D ++++ N+LVNMY +C + SA +F+ ++IRDVVSWN
Sbjct: 120 DPSALEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWN 179
Query: 212 TIIGALAESENFGKALELYLRMSVD-------IVFPNQTTFVYVINSCAGLQNSILGKSI 264
II ALA + A++ + M ++ + P+ T + +C G + G+ I
Sbjct: 180 AIISALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREI 239
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
HA VI+ E ++ VG+ALV YA C L+ A CF +++ +N+VSWNA+I Y +
Sbjct: 240 HALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCD 299
Query: 325 TSIFLLIELLQL-GYRPNEFTFSHVLR---SSLAFQL-LQLHCLIIRMGYENYEYVLGSL 379
F + +QL G +PN TF L + AF+ LQLH ++ G E V ++
Sbjct: 300 KEAFRIFHQMQLEGVQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEADASVGNAV 359
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPA-NIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
+ +AK + DALA IP+ + + N + G Y G+ E KL +E D+++
Sbjct: 360 VHMFAKCWSLDDALAAFQ--RIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVIT 417
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
WN+++ A KE + LF+ M A ++ T+ ++L AC+ LA G +H LI
Sbjct: 418 WNMILGAYVEREMAKEAVRLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRRIHELIG 477
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
+ S+ FV N L+DM+GKC S+G + + F + ++ +W L++AL NG A+ AL
Sbjct: 478 ERGA-DSELFVGNALVDMFGKCASLGGARQAFERIRGKDASSWNVLVAALAQNGDAEEAL 536
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDL 618
++F +M+ G KP V I V AC H G + + +F + YG+ P HY + DL
Sbjct: 537 KQFLQMQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFASLRHDYGIAPLPSHYSGMTDL 596
Query: 619 LVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L R G L EAE++I +PF + L W T L C+
Sbjct: 597 LGRAGFLDEAEEVIKRIPFSQDELPWMTLLSACK 630
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 154/574 (26%), Positives = 280/574 (48%), Gaps = 21/574 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLLS--CDSLNPVE 57
M R+V+S+N++I+AY++ G+ ++A+ +F M G EP TF ++S CD
Sbjct: 67 MDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSALEA 126
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ A V + GL +D +G AL+ +Y + G L VFE M + +V+WN+I+S
Sbjct: 127 GDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWNAIISALA 186
Query: 118 KHGFVEDCMFLFCE-----LVRSEVALTESSFV--GVIHGLSNEQDLEFGEQIHGLVIKN 170
+H + M F E L E AL F + + + LE G +IH LVI+
Sbjct: 187 RHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREIHALVIER 246
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
G + EL+V N+LV+MY C + A + F+ + R+VVSWN +I A +A ++
Sbjct: 247 GCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIF 306
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
+M ++ V PN TFV +++C+ G +H+ V ++ LE D VG+A+V +AKC
Sbjct: 307 HQMQLEGVQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEADASVGNAVVHMFAKC 366
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL- 349
+L+ A F I KN+ SWN L+ Y L E+++ + T++ +L
Sbjct: 367 WSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVME---ERDVITWNMILG 423
Query: 350 ---RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL---AFVTALNIPR 403
+A + ++L +I G ++ +++ + A L+++ +
Sbjct: 424 AYVEREMAKEAVRLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRRIHELIGERGADS 483
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+ N + ++ + + ++ D SWN+++AA A NGD +E L+ F M+
Sbjct: 484 ELFVGNALVDMFGKCASLGGARQAFERIRGKDASSWNVLVAALAQNGDAEEALKQFLQMQ 543
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
I P + TF+ + ACS L ++ ++ I+ + + D+ G+ G +
Sbjct: 544 REGIKPTDVTFIVVFWACSHAGRLEQAKTIFASLRHDYGIAPLPSHYSGMTDLLGRAGFL 603
Query: 524 GSSVKIFNEMT-DRNVITWTALISALGLNGFAQR 556
+ ++ + ++ + W L+SA ++G +R
Sbjct: 604 DEAEEVIKRIPFSQDELPWMTLLSACKVHGDVER 637
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 212/660 (32%), Positives = 335/660 (50%), Gaps = 42/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEG 58
MP+RNVVS+ +++ A S GY+E+ALR + M G F ++S C SL N V G
Sbjct: 407 MPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPG 466
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + V+ +GL V +L+ ++G G + + +F+ M ++WN+++S++
Sbjct: 467 LQVASQVIVSGLQ-NQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSH 525
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G C +F ++ + ++ ++ ++ G IH L +++ D + V
Sbjct: 526 QGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTV 585
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LVNMY + AE +F ++ RD++SWNT+I + ++ N AL+ ++
Sbjct: 586 INALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNE 645
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN TF + +C+ I GK +HA V++ +L+ ++ VG++L+ Y KC+++E A
Sbjct: 646 SPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEK 705
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQL 357
F + +IVS+N LI GYA T + ++ G +PN T ++ S +
Sbjct: 706 VFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSND 765
Query: 358 LQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L LH IIR G+ + EYV SL+T YAK G + + NI
Sbjct: 766 LHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESS---------------TNIFN 810
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
I N+ +IVSWN +IAA G +E L+LF M+ A D
Sbjct: 811 SITNK-----------------NIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRV 853
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
LS+C+ L +L G LHGL K+ + SD++V N +DMYGKCG + +++ +
Sbjct: 854 CLAECLSSCASLASLEEGMQLHGLGMKSGL-DSDSYVVNAAMDMYGKCGKMDEMLQVVPD 912
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
R W LIS G+ + A E F++M G KPD V +A+L+AC H GLV +G
Sbjct: 913 QAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKG 972
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++ + M S+GV P + H C+VDLL R G EAEK I MP PN LIWR+ L +
Sbjct: 973 IDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSR 1032
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 176/661 (26%), Positives = 316/661 (47%), Gaps = 47/661 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEG- 58
M DR ++ + +S RCG A M M G + F L++ C+ EG
Sbjct: 303 MADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGI 362
Query: 59 ---AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
A + A + GL + ++GTALL LYG G + + +F +MP +++V+W +++
Sbjct: 363 ACGAAIHALTHRAGLM-GNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVA 421
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+G++E+ + + ++ R V ++F V+ + ++ G Q+ VI +G +
Sbjct: 422 LSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQ 481
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ VANSL+ M+ + AEK+F +E D +SWN +I + K ++ M
Sbjct: 482 VSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRH 541
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ P+ TT +++ CA + G IH+ ++++L+ V V +ALV+ Y+ L
Sbjct: 542 HGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSD 601
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F +S ++++SWN +I Y + T ++ L +L PN TFS L + +
Sbjct: 602 AEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSS 661
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
L +H +++++ + V SL+T Y K + DA
Sbjct: 662 PGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDA------------------ 703
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
K+ + DIVS+N++I A D + +++F +MR+A I P+
Sbjct: 704 --------------EKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPN 749
Query: 471 NYTFVSLLSACSKLCNLA-LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
T +++ + + +L G LH I +T + SD +V N LI MY KCG++ SS I
Sbjct: 750 YITMINIHGSFASSNDLHNYGRPLHAYIIRTGFL-SDEYVANSLITMYAKCGNLESSTNI 808
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
FN +T++N+++W A+I+A G + AL+ F +M+ G K DRV L L++C +
Sbjct: 809 FNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASL 868
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EGM+L +S G++ + + +D+ + G + E +++ P W T +
Sbjct: 869 EEGMQLHGLGMKS-GLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQ-CWNTLIS 926
Query: 650 G 650
G
Sbjct: 927 G 927
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 213/485 (43%), Gaps = 45/485 (9%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE---KMFKDVEIRDVVSWNTIIGALAE 219
IHGL ++ N+L+ YF+ +A +F ++ R +W T +
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCA--GLQNSIL-GKSIHAKVIKNALECD 276
+ GKA E+ M V + ++ +C G I G +IHA + L +
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQ 335
V++G+AL+ Y + A F E+ +N+VSW AL++ +S ++ ++ +
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440
Query: 336 LGYRPNEFTFSHVLR--SSLAFQL--LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
G N F+ V+ SL ++ LQ+ +I G +N V SL+T + G + D
Sbjct: 441 DGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHD 500
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
A KL ++E D +SWN +I+ +H G
Sbjct: 501 A--------------------------------EKLFDRMEEHDTISWNAMISMYSHQGI 528
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+ +F MR + PD T SL+S C+ + + GS +H L ++ + SS T V N
Sbjct: 529 CSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVT-VIN 587
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
L++MY G + + +F M+ R++I+W +IS+ N + AL+ ++ P
Sbjct: 588 ALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESP 647
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ + + L AC G + +G ++ + ++ + + ++ + + +++AEK+
Sbjct: 648 NHLTFSSALGACSSPGALIDG-KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKV 706
Query: 632 ITTMP 636
+MP
Sbjct: 707 FQSMP 711
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 203/652 (31%), Positives = 337/652 (51%), Gaps = 43/652 (6%)
Query: 8 SFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQASV 65
S+ ++IS S+ +A+R+F M G PT + F +LS C + +E G QL V
Sbjct: 238 SWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 297
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
LK G F +D +V AL+ LY G L +F +M ++ VT+N++++ + G+ E
Sbjct: 298 LKLG-FSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 356
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
M LF + + ++ ++ S++ L G+Q+H K GF + +L+N+
Sbjct: 357 MELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNL 416
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C+ I +A F + E+ +VV WN ++ A ++ + ++ +M ++ + PNQ T+
Sbjct: 417 YAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 476
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
++ +C L + LG+ IH+++IK + + + +V S L+D YAK L+ A +
Sbjct: 477 PSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 536
Query: 306 KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QL 360
K++VSW +I GY + ++ ++L G R +E ++ + + Q L Q+
Sbjct: 537 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 596
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIAGIYNRTG 419
H G+ + +L+T Y+K G I +A LAF
Sbjct: 597 HAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAF------------------------ 632
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
Q E D ++WN +++ +G+ +E L +F M I +N+TF S +
Sbjct: 633 ---------EQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVK 683
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
A S+ N+ G +H +I KT S+T VCN +I MY KCGSI + K F E++ +N +
Sbjct: 684 AASETANMKQGKQVHAVITKTGY-DSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEV 742
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W A+I+A +GF AL+ F +M +P+ V L+ VL+AC H GLV +G+E FE M
Sbjct: 743 SWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESM 802
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
N YG+ P+ +HY CVVD+L R G L A+ I MP P+AL+WRT L C
Sbjct: 803 NTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSAC 854
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 166/658 (25%), Positives = 298/658 (45%), Gaps = 48/658 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCD----SLNP 55
MP+R + ++N +I + +F M+N P + TF G+L +C + +
Sbjct: 129 MPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDV 188
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
VE Q+ A ++ GL V L+ LY R+G +D VF+ + K +W +++S
Sbjct: 189 VE--QIHARIIYQGL-GKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISG 245
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
K+ + + LFC++ + T +F V+ + LE GEQ+HGLV+K GF +
Sbjct: 246 LSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 305
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V N+LV++YF + SAE +F ++ RD V++NT+I L++ KA+EL+ RM +
Sbjct: 306 TYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQL 365
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D + P+ T ++ +C+ G+ +HA K + + AL++ YAKC ++E
Sbjct: 366 DGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIET 425
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
A F E +N+V WN +++ Y + F + +Q+ PN++T+ +L++ +
Sbjct: 426 ALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 485
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
L Q+H II+ ++ YV L+ YAK G + A
Sbjct: 486 LGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAW----------------- 528
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+L + D+VSW +IA + L F+ M I D
Sbjct: 529 ---------------DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 573
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ +SAC+ L L G +H + SSD N L+ +Y KCG+I + F
Sbjct: 574 EVGLTNAVSACAGLQALKEGQQIHAQACVSG-FSSDLPFQNALVTLYSKCGNIEEAYLAF 632
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + I W AL+S +G + AL F M G + + + A ++
Sbjct: 633 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMK 692
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+G ++ + ++ G + E + + ++ + + G + +A+K + N + W +
Sbjct: 693 QGKQVHAVITKT-GYDSETEVCNAIISMYAKCGSISDAKKQFLELSM-KNEVSWNAMI 748
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 164/629 (26%), Positives = 285/629 (45%), Gaps = 45/629 (7%)
Query: 34 NRGFEPTQFTFGGLLS-CDSLNPV--EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGC 90
N G P T LL C N EG +L + +LK G F +A + LL Y G
Sbjct: 60 NCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLG-FDNNACLSEKLLDFYLFKGD 118
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG 150
LD + VF++MP +++ TWN ++ LF +V V E +F GV+
Sbjct: 119 LDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEA 178
Query: 151 LSNEQ-DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
+ EQIH +I G +V N L+++Y + + A ++F + ++D S
Sbjct: 179 CRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSS 238
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
W +I L+++E +A+ L+ M V + P F V+++C +++ +G+ +H V+
Sbjct: 239 WVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 298
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFL 329
K D +V +ALV Y +L A FS +S ++ V++N LI G +
Sbjct: 299 KLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 358
Query: 330 LIELLQL-GYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
L + +QL G P+ T + ++ F QLH ++G+ + + + G+L+ YA
Sbjct: 359 LFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYA 418
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
K I AL + + E ++V WN+++
Sbjct: 419 KCSDIETALNYFL--------------------------------ETEVENVVLWNVMLV 446
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
A D + +F+ M+ I P+ YT+ S+L C +L +L LG +H I KT
Sbjct: 447 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTS-FQ 505
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
+ +VC++LIDMY K G + ++ I ++V++WT +I+ F +AL FR+M
Sbjct: 506 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 565
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
G + D V L ++AC ++EG ++ + S G ++ + +V L + G+
Sbjct: 566 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSKCGN 624
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEGCQR 653
++EA N + W + G Q+
Sbjct: 625 IEEAYLAFEQTEAGDN-IAWNALVSGFQQ 652
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 162/627 (25%), Positives = 289/627 (46%), Gaps = 65/627 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
M R+ V++N++I+ S+CGY E A+ +F M G EP T L+ +C S + G
Sbjct: 332 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSG 391
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A K G D G ALL LY + ++ ++ F + +++V WN ++ +G
Sbjct: 392 QQLHAYTTKLGFASNDKIEG-ALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGL 450
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + +F ++ E+ + ++ ++ DLE GEQIH +IK F V
Sbjct: 451 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYV 510
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ L++MY + + +A + +DVVSW T+I + KAL + +M +
Sbjct: 511 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 570
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
++ +++CAGLQ G+ IHA+ + D+ +ALV Y+KC N+E A+L
Sbjct: 571 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYL 630
Query: 299 CFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF-- 355
F + + ++WNAL+ G+ S ++ ++ + + + G N FTF ++++
Sbjct: 631 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETAN 690
Query: 356 --QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q Q+H +I + GY++ V ++++ YAK G ISDA
Sbjct: 691 MKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDA--------------------- 729
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
K +L + VSWN +I A + +G E L+ F M + + P++ T
Sbjct: 730 -----------KKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 778
Query: 474 FVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
V +LSACS + + G ++ +GL K E +VC ++DM + G + +
Sbjct: 779 LVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPE-----HYVC--VVDMLTRAGLLSRA 831
Query: 527 VKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT---- 581
EM + + + W L+SA ++ + +F L +P+ A +L+
Sbjct: 832 KDFILEMPIEPDALVWRTLLSACVVH--KNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 889
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPE 608
CR + +L + + GV+ E
Sbjct: 890 VCRKW----DARDLTRQKMKEKGVKKE 912
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 184/560 (32%), Positives = 297/560 (53%), Gaps = 39/560 (6%)
Query: 103 RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ 162
R + V W + + K+GF + L+ ++ R+ + + F+ VI ++ DL+ G +
Sbjct: 82 RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
+H +I GF+ +++V +L +MY +C + +A ++F + RDVVSWN II +++
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQ 201
Query: 223 FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSA 282
+AL L+ M V+ + PN +T V V+ CA L GK IH I++ +E DV V +
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNG 261
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPN 341
LV+ YAKC N+ AH F + +++ SWNA+I GY+ S +Q+ G +PN
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPN 321
Query: 342 EFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
T VL + Q Q+H IR G+E+ + V +L+ YAK G +
Sbjct: 322 SITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNV-------- 373
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
N KL ++ + ++V+WN +I+ + +G E L
Sbjct: 374 ------------------------NSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALA 409
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
LF M+A I PD++ VS+L AC+ L G +HG ++ S+ V L+D+Y
Sbjct: 410 LFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGF-ESNVVVGTGLVDIY 468
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
KCG++ ++ K+F M +++V++WT +I A G++G + AL F +M+ G K D +A
Sbjct: 469 AKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFT 528
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
A+LTAC H GLV +G++ F+ M YG+ P+++HY C+VDLL R GHL EA II M
Sbjct: 529 AILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSL 588
Query: 638 PPNALIWRTFLEGCQ-RCRI 656
P+A +W L C+ C I
Sbjct: 589 EPDANVWGALLGACRIHCNI 608
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 183/624 (29%), Positives = 304/624 (48%), Gaps = 67/624 (10%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQ 62
N V + I Y + G+ ALR++ M G P + F ++ +C S + ++ G ++
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
++ G F +D VGTAL +Y + G L+ VF+ MP++ +V+WN+I++ + ++G
Sbjct: 144 EDIIARG-FESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQP 202
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ + LF E+ + + S+ V V+ ++ LE G+QIH I++G + ++LV N L
Sbjct: 203 YEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGL 262
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
VNMY +C + +A K+F+ + IRDV SWN IIG + + +AL + RM V + PN
Sbjct: 263 VNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNS 322
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T V V+ +CA L G+ IH I++ E + VG+ALV+ YAKC N+ A+ F
Sbjct: 323 ITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFER 382
Query: 303 ISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAF----QL 357
+ KN+V+WNA+I GY+ P ++ L IE+ G +P+ F VL + F Q
Sbjct: 383 MPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQG 442
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
Q+H IR G+E+ V+G +GL+ IY +
Sbjct: 443 KQIHGYTIRSGFES-NVVVG--------TGLVD-----------------------IYAK 470
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G N KL ++ D+VSW +I A +G ++ L LF M+ D+ F ++
Sbjct: 471 CGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAI 530
Query: 478 LSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
L+ACS + G S +GL K E + C L+D+ G+ G + + I
Sbjct: 531 LTACSHAGLVDQGLQYFQCMKSDYGLAPKLE-----HYAC--LVDLLGRAGHLDEANGII 583
Query: 531 NEMT---DRNVITWTALISALGLN---GFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
M+ D NV W AL+ A ++ ++A + E++ PD +L+
Sbjct: 584 KNMSLEPDANV--WGALLGACRIHCNIELGEQAAKHLFELD-----PDNAGYYVLLSNIY 636
Query: 585 HGGLVREGMELFERMNRSYGVEPE 608
E + +M + GV+ +
Sbjct: 637 AEAQRWEDVAKLRKMMKEKGVKKQ 660
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 231/487 (47%), Gaps = 42/487 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+VVS+N+II+ YS+ G +AL +F M G +P T ++ C L +E G
Sbjct: 181 MPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQG 240
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +++G+ +D V L+ +Y + G ++ +FE MP + + +WN+I+ +
Sbjct: 241 KQIHCYAIRSGIE-SDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSL 299
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + + F + + + V V+ ++ LE G+QIHG I++GF+ +V
Sbjct: 300 NSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVV 359
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LVNMY +C + SA K+F+ + ++VV+WN II ++ + +AL L++ M +
Sbjct: 360 GNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGI 419
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ V V+ +CA GK IH I++ E +V VG+ LVD YAKC N+ A
Sbjct: 420 KPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQK 479
Query: 299 CFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + +++VSW +IL Y ++ L ++ + G + + F+
Sbjct: 480 LFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFT----------- 528
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAG 413
+++T+ + +GL+ L + + + P +
Sbjct: 529 --------------------AILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVD 568
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+ R G +E ++ + PD W ++ AC + + + + K++ + PDN
Sbjct: 569 LLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHL--FELDPDNA 626
Query: 473 TFVSLLS 479
+ LLS
Sbjct: 627 GYYVLLS 633
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 204/647 (31%), Positives = 335/647 (51%), Gaps = 33/647 (5%)
Query: 8 SFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQASV 65
S+ ++IS S+ +A+R+F M G PT + F +LS C + +E G QL V
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
LK G F +D +V AL+ LY G L +F +M ++ VT+N++++ + G+ E
Sbjct: 315 LKLG-FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
M LF + + ++ ++ S + L G+Q+H K GF + +L+N+
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +CA I +A F + E+ +VV WN ++ A ++ + ++ +M ++ + PNQ T+
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
++ +C L + LG+ IH+++IK + + +V S L+D YAK L+ A +
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Query: 306 KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
K++VSW +I GY + ++ ++L G R +E ++ + + Q L
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL------ 607
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
+ G + + SG SD L F AL +Y+R G+ E+
Sbjct: 608 -KEGQQ--------IHAQACVSGFSSD-LPFQNAL------------VTLYSRCGKIEES 645
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
Q E D ++WN +++ +G+ +E L +F M I +N+TF S + A S+
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
N+ G +H +I KT S+T VCN LI MY KCGSI + K F E++ +N ++W A+
Sbjct: 706 ANMKQGKQVHAVITKTGY-DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAI 764
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I+A +GF AL+ F +M +P+ V L+ VL+AC H GLV +G+ FE MN YG
Sbjct: 765 INAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYG 824
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ P+ +HY CVVD+L R G L A++ I MP P+AL+WRT L C
Sbjct: 825 LSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSAC 871
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 165/640 (25%), Positives = 296/640 (46%), Gaps = 47/640 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCD----SLNP 55
MP+R + ++N +I + + + +F+ M++ P + TF G+L +C + +
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 205
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
VE Q+ A +L GL + V L+ LY R+G +D VF+ + K +W +++S
Sbjct: 206 VE--QIHARILYQGLRDS-TVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 262
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
K+ + + LFC++ + T +F V+ + LE GEQ+HGLV+K GF +
Sbjct: 263 LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 322
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V N+LV++YF + SAE +F ++ RD V++NT+I L++ KA+EL+ RM +
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL 382
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D + P+ T ++ +C+ G+ +HA K + + AL++ YAKC ++E
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLA 354
A F E +N+V WN +++ Y + F + +Q+ PN++T+ +L++ +
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
L Q+H II+ ++ YV L+ YAK G + A
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW----------------- 545
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+L + D+VSW +IA + L F+ M I D
Sbjct: 546 ---------------DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ +SAC+ L L G +H + SSD N L+ +Y +CG I S F
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGF-SSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + I W AL+S +G + AL F M G + + + A ++
Sbjct: 650 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
+G ++ + ++ G + E + + ++ + + G + +AEK
Sbjct: 710 QGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEK 748
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 162/629 (25%), Positives = 285/629 (45%), Gaps = 45/629 (7%)
Query: 34 NRGFEPTQFTFGGLLS-CDSLNPV--EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGC 90
NRG P T LL C N EG +L + +LK GL ++ + L Y G
Sbjct: 77 NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGL-DSNGCLSEKLFDFYLFKGD 135
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG 150
L VF++MP +++ TWN ++ + + LF +V V E +F GV+
Sbjct: 136 LYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA 195
Query: 151 LSNEQ-DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
+ EQIH ++ G +V N L+++Y + + A ++F + ++D S
Sbjct: 196 CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
W +I L+++E +A+ L+ M V + P F V+++C +++ +G+ +H V+
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFL 329
K D +V +ALV Y NL A FS +S ++ V++N LI G +
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375
Query: 330 LIELLQL-GYRPNEFTFSHVLRSSLA----FQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
L + + L G P+ T + ++ + A F+ QLH ++G+ + + G+L+ YA
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
K I AL + + E ++V WN+++
Sbjct: 436 KCADIETALDYFL--------------------------------ETEVENVVLWNVMLV 463
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
A D + +F+ M+ I P+ YT+ S+L C +L +L LG +H I KT
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF-Q 522
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
+ +VC++LIDMY K G + ++ I ++V++WT +I+ F +AL FR+M
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 582
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
G + D V L ++AC ++EG ++ + S G ++ + +V L R G
Sbjct: 583 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSRCGK 641
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEGCQR 653
++E+ N + W + G Q+
Sbjct: 642 IEESYLAFEQTEAGDN-IAWNALVSGFQQ 669
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 156/623 (25%), Positives = 287/623 (46%), Gaps = 57/623 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
M R+ V++N++I+ S+CGY E A+ +F M G EP T L+ S + G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A K G F ++ + ALL LY + ++ + F + +++V WN ++ +G
Sbjct: 409 QQLHAYTTKLG-FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + +F ++ E+ + ++ ++ DLE GEQIH +IK F V
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ L++MY + + +A + +DVVSW T+I + KAL + +M +
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
++ +++CAGLQ G+ IHA+ + D+ +ALV Y++C +E ++L
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 299 CFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF-- 355
F + + ++WNAL+ G+ S ++ ++ + + + + G N FTF ++++
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707
Query: 356 --QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q Q+H +I + GY++ V +L++ YAK G ISDA
Sbjct: 708 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA--------------------- 746
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
K ++ + VSWN +I A + +G E L+ F M + + P++ T
Sbjct: 747 -----------EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 795
Query: 474 FVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
V +LSACS + + G +S +GL K E +VC ++DM + G + +
Sbjct: 796 LVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE-----HYVC--VVDMLTRAGLLSRA 848
Query: 527 VKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ EM + + + W L+SA ++ + +F L +P+ A +L+
Sbjct: 849 KEFIQEMPIKPDALVWRTLLSACVVH--KNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 906
Query: 586 GGLVREGMELFERMNRSYGVEPE 608
+ +L + + GV+ E
Sbjct: 907 VSKKWDARDLTRQKMKEKGVKKE 929
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 186/665 (27%), Positives = 358/665 (53%), Gaps = 21/665 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
MP R+VVS+NS++S + + G +++++F+ M G E +F +L S+ N G
Sbjct: 141 MPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLG 200
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ L+ G + D G+ALL +Y + LDE +VF MP+K+ ++W++I++ +
Sbjct: 201 TQIHGIALRMG-YDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQ 259
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ F++ + +F E+ + V +++S + V+ + DL G Q+H +K+ F + +V
Sbjct: 260 NNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIV 319
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ ++MY +C + A+++F E ++ S+N +I ++ +N +AL L+ ++S +
Sbjct: 320 RTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSL 379
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
++ + + +CA ++ G +H K+ ++ V +A +D Y KC+ L+ A
Sbjct: 380 GFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACR 439
Query: 299 CFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F E+ K+ VSWNA+I + ++ ++ +L+ +L+ G P+E+TF VL++ L
Sbjct: 440 VFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGDSL 499
Query: 358 ---LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+++H I+++G + Y+ SL+ Y+K G+I +A + I G
Sbjct: 500 NHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIG---------IGD 550
Query: 415 YNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
N ++ ET++ ++ + IVSWN +I+ ++ F M I PD
Sbjct: 551 SNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPD 610
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+T+ ++L C+ L ++ LG +H + K E+ D ++C+ L+DMY KCG++ S +F
Sbjct: 611 KFTYSTVLDTCANLASIGLGKQIHAHVIKKEL-QYDVYICSTLVDMYSKCGNLHDSRLMF 669
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ R+ +TW A+I +G + A++ F M + P+ +++L AC H GLV
Sbjct: 670 EKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVE 729
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G++ F M + YG++P ++HY +VD+L + G +++A ++I MPF + +IWRT L
Sbjct: 730 RGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLSA 789
Query: 651 CQRCR 655
C+ R
Sbjct: 790 CKINR 794
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 177/676 (26%), Positives = 305/676 (45%), Gaps = 88/676 (13%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL----SCDSLNPVE 57
P +V +F+ + ++ E + +MI GF PT F LL +C +L
Sbjct: 45 PATSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLG--- 101
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
A+ L +G+ D A++ Y + FE MP + +V+WNS++S F
Sbjct: 102 ----YATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFL 157
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G + + +F E+ RS V SF ++ S ++ + G QIHG+ ++ G+D +++
Sbjct: 158 QTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVV 217
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
++L++MY +C + + +F + ++ +SW+ II ++ L+++ M
Sbjct: 218 SGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVG 277
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V +Q+ + V+ SCA L + LG +HA +K+ D V +A +D YAKC+N++ A
Sbjct: 278 VGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQ 337
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F N N+ S+NA+I GY+ K + LL F + +SSL F
Sbjct: 338 RLFDMSENLNLQSYNAMITGYSQKDNGFRALLL--------------FRKLSKSSLGFDE 383
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL---AFVTALNIPRAVVPANIIAGI 414
+ L G+L GL S+ L T N R + AN +
Sbjct: 384 ISLS---------------GALRACATVKGL-SEGLQLHGLATKSNFSRNICVANAFIDM 427
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y + +E ++ ++ R D VSWN +IAA N + + L + M + + PD YTF
Sbjct: 428 YGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTF 487
Query: 475 VSLLSACSKLCNLALGSSL-HGLIKKTEII----SSDTFVCNMLIDMYGKCGSIGSSVKI 529
S+L AC+ G SL HG+ T I+ +S+ ++ + L+DMY KCG I + KI
Sbjct: 488 GSVLKACA-------GDSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKI 540
Query: 530 FNE-----------------------MTDRNV----ITWTALISALGLNGFAQRALEKFR 562
N+ + DR V ++W A+IS + ++ A F
Sbjct: 541 HNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFN 600
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHC--VVDLLV 620
M +G PD+ VL C + + G ++ + + E + D Y C +VD+
Sbjct: 601 RMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKK---ELQYDVYICSTLVDMYS 657
Query: 621 RYGHLKEAEKIITTMP 636
+ G+L ++ + P
Sbjct: 658 KCGNLHDSRLMFEKAP 673
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 210/673 (31%), Positives = 353/673 (52%), Gaps = 55/673 (8%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-----FEPTQFTFGGLLSCDSLNPV 56
P R+++++N+++S Y++ G V +F M RG PT+ TFG L++ SL+
Sbjct: 231 PIRDLITWNALMSVYAKKGDVASTFTLFKDM-QRGDSRIQLRPTEHTFGSLITAASLSSG 289
Query: 57 EGA---QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
A Q+ VLK+G +D +VG+AL+ + RHG DE +F + +K+ VT N ++
Sbjct: 290 SSAVLDQVLVWVLKSGC-SSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLI 348
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS----NEQDLEFGEQIHGLVIK 169
+ F E+ + +F R+ V + ++V ++ L+ +E+ L G +HG +++
Sbjct: 349 VGLVRQDFSEEAVKIFVG-TRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLR 407
Query: 170 NGF-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
G D ++ V+N LVNMY +C I SA K+F+ +E D +SWNTII AL ++ N +A+
Sbjct: 408 TGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVM 467
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
Y M + P+ + ++SCAGL+ G+ +H +K L+ D V + LV Y
Sbjct: 468 HYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYG 527
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI--ELLQLGYRPNEFTFS 346
+C + F+ ++ + VSWN ++ AS +P S + + +++ G PN+ TF
Sbjct: 528 ECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFI 587
Query: 347 HVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
++L + +L Q+H +++ G V +L++ YAKSG + T ++
Sbjct: 588 NLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMS-- 645
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
+R D +SWN +I+ +NG+ +E ++ M
Sbjct: 646 -----------------------------DRRDAISWNSMISGYIYNGNLQEAMDCVWLM 676
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ D TF +L+AC+ + L G LH ++ + SD V + L+DMY KCG
Sbjct: 677 IHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHL-ESDVVVESALVDMYSKCGR 735
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ + K+FN MT RN +W ++IS +G ++A+E F EM PD V ++VL+A
Sbjct: 736 VDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSA 795
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H GLV G+E FE M +G+ P+++HY CV+DLL R G + + ++ I MP PNAL
Sbjct: 796 CSHAGLVERGLEYFEMMP-DHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNAL 854
Query: 643 IWRTFLEGCQRCR 655
IWRT L C++ +
Sbjct: 855 IWRTVLVACRQSK 867
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 178/686 (25%), Positives = 319/686 (46%), Gaps = 77/686 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM---INRGFEPTQFTFGGLL-SCDSLNPV 56
MP+RN VS+ ++S Y G E+A R+F M + G PT FTFG LL +C P
Sbjct: 122 MPERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGP- 180
Query: 57 EGAQLQASVLKNGL-----FCADAFVGTALLGLYGRHGCLDEVVS--VFEDMPRKSLVTW 109
+L +V +GL + ++ V AL+ +YG +++ VF+ P + L+TW
Sbjct: 181 --DRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITW 238
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVAL----TESSFVGVI-HGLSNEQDLEFGEQIH 164
N+++S++ K G V LF ++ R + + TE +F +I + +Q+
Sbjct: 239 NALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVL 298
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
V+K+G +L V ++LV+ + + A+ +F ++ ++ V+ N +I L +
Sbjct: 299 VWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSE 358
Query: 225 KALELYL--RMSVDIVFPNQTTFVYVINSCA-------GLQNSILGKSIHAKVIKNAL-E 274
+A+++++ R +VD+ N T+V ++++ A GL+ +G+ +H +++ L +
Sbjct: 359 EAVKIFVGTRNTVDV---NADTYVVLLSALAEYSISEEGLR---IGRVVHGHMLRTGLTD 412
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
+ V + LV+ YAKC +E A F + + +SWN +I + + L+
Sbjct: 413 LKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLM 472
Query: 335 -QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
Q P+ F L S +LL Q+HC ++ G
Sbjct: 473 RQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWG--------------------- 511
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
L++ +V +N++ +Y G ++ K+ + + D VSWN ++ A +
Sbjct: 512 ---------LDLDTSV--SNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASS 560
Query: 450 -GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
E++++F M + P+ TF++LL+A S L L LG +H + K ++ D
Sbjct: 561 QTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVM-EDNV 619
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFL 567
V N LI Y K G +GS +F M+D R+ I+W ++IS NG Q A++ M
Sbjct: 620 VDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHS 679
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G D +L AC + GMEL RS+ +E ++ +VD+ + G +
Sbjct: 680 GQIMDCCTFSIILNACASVAALERGMELHAFGIRSH-LESDVVVESALVDMYSKCGRVDY 738
Query: 628 AEKIITTMPFPPNALIWRTFLEGCQR 653
A K+ +M N W + + G R
Sbjct: 739 ASKLFNSMT-QRNEFSWNSMISGYAR 763
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 153/605 (25%), Positives = 274/605 (45%), Gaps = 43/605 (7%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L ++K GL D F+ L+ Y + L VF++MP ++ V+W +VS + HG
Sbjct: 83 LHVELIKRGLN-HDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHG 141
Query: 121 FVEDCMFLFCELVRS-EVALTESSFV-GVIHGLSNEQD-----LEFGEQIHGLVIKNGFD 173
E+ +F ++R + +SF G + L QD L F Q+HGLV K +
Sbjct: 142 IAEEAFRVFRAMLREVQAGCRPTSFTFGTL--LRACQDGGPDRLGFAVQVHGLVSKTEYA 199
Query: 174 YELLVANSLVNMYFQC--AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
V N+L++MY C A+++F IRD+++WN ++ A+ + L+
Sbjct: 200 SNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFK 259
Query: 232 RM----SVDIVFPNQTTFVYVIN-SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
M S + P + TF +I + +S + + V+K+ D++VGSALV
Sbjct: 260 DMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSA 319
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFS 346
+A+ + A F + KN V+ N LI+G + + + N T+
Sbjct: 320 FARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYV 379
Query: 347 HVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
VL S+LA + L R+G + ++L ++GL +A
Sbjct: 380 -VLLSALAEYSISEEGL--RIGRVVHGHML--------RTGLTDLKIAV----------- 417
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
+N + +Y + G K+ +E D +SWN +I+A NG+ +E + + MR +
Sbjct: 418 -SNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSC 476
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
I P N+ +S LS+C+ L L G +H K + DT V N+L+ MYG+CG++
Sbjct: 477 ISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWG-LDLDTSVSNVLVKMYGECGAMSDY 535
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEK-FREMEFLGFKPDRVALIAVLTACRH 585
K+FN M + + ++W ++ + + + K F M G P++V I +L A
Sbjct: 536 WKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSP 595
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
++ G ++ + + +GV + + ++ + G + E + T M +A+ W
Sbjct: 596 LSVLELGKQVHAAVMK-HGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWN 654
Query: 646 TFLEG 650
+ + G
Sbjct: 655 SMISG 659
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 224/514 (43%), Gaps = 56/514 (10%)
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
D E +H +IK G +++L + N LVN Y + A + +A ++F ++ R+ VSW ++
Sbjct: 76 DANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVS 135
Query: 216 ALAESENFGKALELYLRMSVDI---VFPNQTTFVYVINSCAGLQNSILG--KSIHAKVIK 270
+A ++ M ++ P TF ++ +C LG +H V K
Sbjct: 136 GYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSK 195
Query: 271 NALECDVFVGSALVDFYAKCDNLEG--AHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
+ V +AL+ Y C A F +++++WNAL+ YA K S F
Sbjct: 196 TEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTF 255
Query: 329 LLIELLQLG-----YRPNEFTFSHVLRSSLAFQ-----LLQLHCLIIRMGYENYEYVLGS 378
L + +Q G RP E TF ++ ++ L Q+ +++ G + YV +
Sbjct: 256 TLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSA 315
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
L++++A+ GL +A +L AV +I G+ R E VK+ + +
Sbjct: 316 LVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLV-RQDFSEEAVKIF-------VGT 367
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC----NLALGSSLH 494
N V N D T+V LLSA ++ L +G +H
Sbjct: 368 RNTVDV----NAD---------------------TYVVLLSALAEYSISEEGLRIGRVVH 402
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
G + +T + V N L++MY KCG+I S+ KIF M + I+W +ISAL NG
Sbjct: 403 GHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNC 462
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHC 614
+ A+ + M P ALI+ L++C L+ G ++ + +G++ + +
Sbjct: 463 EEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVK-WGLDLDTSVSNV 521
Query: 615 VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+V + G + + K+ +M + + W T +
Sbjct: 522 LVKMYGECGAMSDYWKVFNSMA-EHDEVSWNTMM 554
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M RN S+NS+IS Y+R G A+ +F M+ P TF +LS C VE
Sbjct: 746 MTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERG 805
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIV 113
++ + + ++ L GR G +D++ + MP + + W +++
Sbjct: 806 LEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVL 860
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 195/655 (29%), Positives = 345/655 (52%), Gaps = 33/655 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP+R+VVS+NS+IS Y G + +FL M G + TF +L SC SL G
Sbjct: 134 MPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGG 193
Query: 60 -QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K G C D G+ALL +Y + LD + F MP K+ V+W++I++ +
Sbjct: 194 IQIHGLAVKMGFDC-DVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQ 252
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + + LF E+ ++ V +++S+F V + L G Q+HG +K F ++++
Sbjct: 253 NDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVI 312
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ ++MY +C + A+K+F + ++ S+N II A S+ +AL ++ + +
Sbjct: 313 GTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGL 372
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
++ + +CA ++ + G +H +K+ + ++ V +A++D Y KC L A L
Sbjct: 373 GLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACL 432
Query: 299 CFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F E+ +++ VSWNA+I + + ++ L + +LQ G P+EFT+ VL++ +Q
Sbjct: 433 VFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQ- 491
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
L+C G E + ++ KS L D+ + ++ +Y++
Sbjct: 492 -ALNC-----GMEIHNRII--------KSRLGLDSFVGIALID-------------MYSK 524
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G + KL +L +VSWN +I+ + +E + F M + PDN+T+ ++
Sbjct: 525 CGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATI 584
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L C+ L + LG +H I K E + SD ++ + L+DMY KCG++ IF + +R+
Sbjct: 585 LDTCANLVTVELGKQIHAQIIKKE-LQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRD 643
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+TW A++ +G + AL+ F M+ KP+ +AVL AC H GLV +G+ F
Sbjct: 644 FVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFH 703
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M +YG++P+++HY CVVD++ R G + +A ++I MPF +A+IWRT L C+
Sbjct: 704 SMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICK 758
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 163/572 (28%), Positives = 280/572 (48%), Gaps = 35/572 (6%)
Query: 68 NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMF 127
+G+ D A+L Y G + +F+ MP + +V+WNS++S + +G +
Sbjct: 101 DGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVID 160
Query: 128 LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYF 187
+F ++ R ++F V+ S+ +D G QIHGL +K GFD +++ ++L++MY
Sbjct: 161 VFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVY 247
+C + + + F + ++ VSW+ II ++++ LEL+ M V +Q+TF
Sbjct: 221 KCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFAS 280
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
V SCAGL LG +H +K DV +G+A +D Y KC+NL A F+ + N N
Sbjct: 281 VFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHN 340
Query: 308 IVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIR 366
+ S+NA+I+GYA + LLQ G +E + S R+ C +I+
Sbjct: 341 LQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRA----------CAVIK 390
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
E + V G M S +S + AN I +Y + G E
Sbjct: 391 GDLEGLQ-VHGLSMKSLCQSN-----------------ICVANAILDMYGKCGALVEACL 432
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+ ++ D VSWN +IAA NG+ ++ L LF +M + + PD +T+ S+L AC+
Sbjct: 433 VFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQA 492
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L G +H I K+ + D+FV LIDMY KCG + + K+ + + ++ V++W A+IS
Sbjct: 493 LNCGMEIHNRIIKSR-LGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIIS 551
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
L ++ A + F +M +G PD +L C + V G ++ ++ + E
Sbjct: 552 GFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK---E 608
Query: 607 PEMDHY--HCVVDLLVRYGHLKEAEKIITTMP 636
+ D Y +VD+ + G++++ + I P
Sbjct: 609 LQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 640
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 139/477 (29%), Positives = 235/477 (49%), Gaps = 18/477 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLN-PVEG 58
+P+ N+ S+N+II Y+R +AL MF + G + + G +C + +EG
Sbjct: 336 LPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEG 395
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K+ L ++ V A+L +YG+ G L E VFE+M + V+WN+I++ +
Sbjct: 396 LQVHGLSMKS-LCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 454
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G E + LF +++S + E ++ V+ + Q L G +IH +IK+ + V
Sbjct: 455 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFV 514
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA---ESENFGKALELYLRMSV 235
+L++MY +C + AEK+ + + VVSWN II + +SE K L M V
Sbjct: 515 GIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGV 574
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D P+ T+ ++++CA L LGK IHA++IK L+ D ++ S LVD Y+KC N++
Sbjct: 575 D---PDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQD 631
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
L F + N++ V+WNA++ GYA + E +QL +PN TF VLR+
Sbjct: 632 FQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGH 691
Query: 355 FQLLQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
L++ H ++ G + ++ +SG +S AL + + V
Sbjct: 692 MGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWR 751
Query: 410 IIAGIYNRTGQYNETVKL---LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+ I G K + QLE D ++ ++ A+ G + EV +L K MR
Sbjct: 752 TLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMR 808
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/526 (26%), Positives = 238/526 (45%), Gaps = 68/526 (12%)
Query: 141 ESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
+ +F + S+ + L G+Q H +I F + V N L+ MY +C+ + A K+F
Sbjct: 42 KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFD 101
Query: 201 DVEIRDVVSWNTIIGALAESENFG-------------------------------KALEL 229
+ RD VSWN ++ A + G K +++
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDV 161
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
+L+M ++TTF V+ SC+ L++ G IH +K +CDV GSAL+D YAK
Sbjct: 162 FLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAK 221
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHV 348
C L+ + F + KN VSW+A+I G + L E+ + G ++ TF+ V
Sbjct: 222 CKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASV 281
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVP 407
RS L+ LGS + +A K+ +D + L+
Sbjct: 282 FRSCAGLSALR----------------LGSQLHGHALKTDFGTDVVIGTATLD------- 318
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+Y + ++ KL + L ++ S+N +I A + E L +F+ ++ + +
Sbjct: 319 ------MYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGL 372
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
D + AC+ + G +HGL K+ + S+ V N ++DMYGKCG++ +
Sbjct: 373 GLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKS-LCQSNICVANAILDMYGKCGALVEAC 431
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+F EM R+ ++W A+I+A NG ++ L F M G +PD +VL AC
Sbjct: 432 LVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQ 491
Query: 588 LVREGMELFERMNRSYGVEPEMDHYH--CVVDLLVRYGHLKEAEKI 631
+ GME+ R+ +S +D + ++D+ + G +++AEK+
Sbjct: 492 ALNCGMEIHNRIIKS---RLGLDSFVGIALIDMYSKCGMMEKAEKL 534
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 85/214 (39%), Gaps = 42/214 (19%)
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC------------ 520
TF + CS L G H + TE + FV N LI MY KC
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPT-VFVTNCLIQMYIKCSDLEFAFKVFDG 102
Query: 521 -------------------GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
G IG + K+F+ M +R+V++W +LIS NG ++ ++ F
Sbjct: 103 MPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVF 162
Query: 562 REMEFLGFKPDRVALIAVLTACR----HGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
+M +G DR VL +C HGG ++ + G + ++ ++D
Sbjct: 163 LQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQ-----IHGLAVKMGFDCDVVTGSALLD 217
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ + L + + +MP N + W + GC
Sbjct: 218 MYAKCKKLDCSIQFFHSMP-EKNWVSWSAIIAGC 250
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 208/658 (31%), Positives = 329/658 (50%), Gaps = 47/658 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
MPDR+VVS+ ++I G+ D++ +F M N G P +FT GL +C ++ G
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG 232
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A K GL D FVG+AL+ LY + G ++ +F MP ++ VTWN +++ + +
Sbjct: 233 KQMHAQAFKLGLL-LDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQ 291
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G V + LFC ++ +V E + V+ G +N ++L+ G+ IH L+IK G++ +
Sbjct: 292 RGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFI 351
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
LV+MY +C A +FK ++ D+V W+ +I L + ++++L+ M +
Sbjct: 352 GCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDT 411
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PNQ T ++++ N G+SIHA V K E DV V +ALV Y K +
Sbjct: 412 LPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTK 471
Query: 299 CFSEISNKNIVSWNALILGYAS---KSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLA 354
+ + +++++SWNA + G P +IF +L+ G+ PN +TF +L S S
Sbjct: 472 LYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFY--HMLEEGFIPNMYTFISILGSCSCL 529
Query: 355 FQL---LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANI 410
F + Q+H II+ ++ +V +L+ YAK + DA +AF
Sbjct: 530 FDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAF--------------- 574
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
++L D+ +W ++I A ++ L F+ M+ + P+
Sbjct: 575 ------------------NRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPN 616
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+T LS CS L +L G LH ++ K+ + SD FV + L+DMY KCG + + +F
Sbjct: 617 EFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHV-SDMFVGSALVDMYAKCGCMEEAEALF 675
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ R+ I W +I NG +AL FR M G PD V +L+AC H GLV
Sbjct: 676 EALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVE 735
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
EG E F M R +G+ P +DH C+VD+L R G E E I M NALIW T L
Sbjct: 736 EGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVL 793
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/576 (25%), Positives = 280/576 (48%), Gaps = 44/576 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
MP++N V++N +++ Y++ G V L++F M+ + +FT +L +S N +G
Sbjct: 274 MPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQG 333
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + ++K G + + F+G L+ +Y + G + + VF+ + + +V W+++++ +
Sbjct: 334 QVIHSLIIKCG-YEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQ 392
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E+ + LF + + + + ++ +N +L++G+ IH V K GF+ ++ V
Sbjct: 393 QGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAV 452
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N+LV MY + + K+++ + RD++SWN + L + + + L ++ M +
Sbjct: 453 SNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGF 512
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN TF+ ++ SC+ L + G+ +HA +IKN L+ + FV +AL+D YAKC LE A +
Sbjct: 513 IPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADV 572
Query: 299 CFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+ +S +++ +W +I YA + ++ ++ Q G +PNEFT + L +
Sbjct: 573 AFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLAS 632
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L QLH ++ + G+ + +V +L+ YAK G + +A A AL I R +
Sbjct: 633 LEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTI------- 684
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+WN +I A NG + L F+ M I PD T
Sbjct: 685 ------------------------AWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVT 720
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F +LSACS + G + + IS C ++D+ G+ G +M
Sbjct: 721 FTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKM 780
Query: 534 T-DRNVITWTALISALGLNG---FAQRALEKFREME 565
+N + W ++ A ++ ++A K E++
Sbjct: 781 QLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQ 816
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 156/582 (26%), Positives = 266/582 (45%), Gaps = 40/582 (6%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D+ + +L+ +Y + V MP + +V+W +++ GF D ++LF E+
Sbjct: 146 DSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQ 205
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
+ E + + S L+ G+Q+H K G +L V ++LV++Y +C I
Sbjct: 206 NEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIE 265
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
A KMF + ++ V+WN ++ A+ + L+L+ M V N+ T V+ CA
Sbjct: 266 LASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCA 325
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+N G+ IH+ +IK E + F+G LVD Y+KC A F I +IV W+A
Sbjct: 326 NSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSA 385
Query: 314 LILGYASKSSPTSIFLLIELLQLGYR-PNEFTFSHVLRSSLAFQLLQ----LHCLIIRMG 368
LI + L L++LG PN++T +L ++ LQ +H + + G
Sbjct: 386 LITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYG 445
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
+E V +L+T Y K+G + D KL
Sbjct: 446 FETDVAVSNALVTMYMKNGCVHDG--------------------------------TKLY 473
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
+ D++SWN ++ G Y L +F +M P+ YTF+S+L +CS L ++
Sbjct: 474 ESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVH 533
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G +H I K + + + FVC LIDMY KC + + FN ++ R++ TWT +I+
Sbjct: 534 YGRQVHAHIIKNQ-LDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNY 592
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
++AL FR+M+ G KP+ L L+ C + G +L + +S G +
Sbjct: 593 AQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKS-GHVSD 651
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
M +VD+ + G ++EAE + + + + W T + G
Sbjct: 652 MFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICG 692
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 136/437 (31%), Positives = 209/437 (47%), Gaps = 38/437 (8%)
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
++++ L + IHGL++K+ + + + SLVN+Y +C A + + RDVVSW
Sbjct: 123 ASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWT 182
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
+I L ++ L+ M + + PN+ T + +C+ LGK +HA+ K
Sbjct: 183 ALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKL 242
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LL 330
L D+FVGSALVD YAKC +E A F + +N V+WN L+ GYA + T + L
Sbjct: 243 GLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLF 302
Query: 331 IELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKS 386
+++L + NEFT + VL+ + L+ +H LII+ GYE E++ L+ Y+K
Sbjct: 303 CSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKC 362
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
GL DA+ + P VV W+ +I
Sbjct: 363 GLAIDAIGVFKTIKKPDIVV--------------------------------WSALITCL 390
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
G +E ++LF MR P+ YT SLLSA + NL G S+H + K +D
Sbjct: 391 DQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYG-FETD 449
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
V N L+ MY K G + K++ M DR++I+W A +S L G R L F M
Sbjct: 450 VAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLE 509
Query: 567 LGFKPDRVALIAVLTAC 583
GF P+ I++L +C
Sbjct: 510 EGFIPNMYTFISILGSC 526
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 200/653 (30%), Positives = 351/653 (53%), Gaps = 32/653 (4%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GA 59
P +NV +NSII A+S+ G+ AL + + P ++TF ++ +C L E G
Sbjct: 67 PAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ +L+ G F +D +VG AL+ +Y R G L VF++MP + LV+WNS++S + H
Sbjct: 127 LVYKQILEMG-FESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G+ E+ + ++ EL S + + V+ +N ++ G+ +HG +K+G + +V
Sbjct: 186 GYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVN 245
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L+ MY + + A ++F ++ +RD V++NT+I + E ++++++L ++D
Sbjct: 246 NGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE-NLDQFK 304
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ T V+ +C L++ L K I+ +++ + V + L+D YAKC ++ A
Sbjct: 305 PDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDV 364
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
F+ + K+ VSWN++I GY L +++ + + ++++ SL+ +L
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADH-ITYLMLISLSTRLAD 423
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
L + G L ++ KSG+ D L++ A++ +Y + G
Sbjct: 424 L-----KFG--------KGLHSNGIKSGIYID-------LSVSNALI------DMYAKCG 457
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+ +++K+ + + D V+WN VI+AC GD+ L++ MR ++ PD TF+ L
Sbjct: 458 EVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLP 517
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
C+ L LG +H + + S+ + N LI+MY KCG + SS ++F M+ R+V+
Sbjct: 518 MCASLAAKRLGKEIHCCLLRFGY-ESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVV 576
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
TWT +I A G+ G ++ALE F +ME G PD V IA++ AC H GLV +G+ FE+M
Sbjct: 577 TWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKM 636
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y ++P ++HY CVVDLL R + +AE+ I MP P+A IW + L C+
Sbjct: 637 KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACR 689
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 152/608 (25%), Positives = 277/608 (45%), Gaps = 79/608 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
MP R++VS+NS+IS YS GY E+AL ++ + N P FT +L + L +G
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQG 226
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L LK+G+ + V LL +Y + + VF++M + VT+N+++ + K
Sbjct: 227 QGLHGFTLKSGVNSV-SVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLK 285
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
VE+ + +F E + + + V+ + +DL + I+ +++ GF E V
Sbjct: 286 LEMVEESVKMFLENL-DQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTV 344
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N L+++Y +C + +A +F +E +D VSWN+II +S + +A++L+ M +
Sbjct: 345 KNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE 404
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ T++ +I+ L + GK +H+ IK+ + D+ V +AL+D YAKC + +
Sbjct: 405 QADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLK 464
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLR--SSLAF 355
F+ + + V+WN +I T + + ++ + P+ TF L +SLA
Sbjct: 465 IFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAA 524
Query: 356 QLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ L ++HC ++R GYE + L I A++
Sbjct: 525 KRLGKEIHCCLLRFGYE--------------------------SELQIGNALIE------ 552
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y++ G + ++ ++ R D+V+W +I A G+ ++ LE F M + I PD+
Sbjct: 553 MYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVV 612
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F++L+ ACS GL++K C + + K
Sbjct: 613 FIALIYACSH----------SGLVEK-------GLACFEKMKTHYK-------------- 641
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
D + + ++ L + +A E + M +PD +VL ACR G M
Sbjct: 642 IDPMIEHYACVVDLLSRSQKISKAEEFIQAMP---IEPDASIWASVLRACRTSG----DM 694
Query: 594 ELFERMNR 601
E ER++R
Sbjct: 695 ETAERVSR 702
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 140/523 (26%), Positives = 248/523 (47%), Gaps = 48/523 (9%)
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
T S + LS+ +L +IH LVI G D + L++ Y S+ +F
Sbjct: 3 TRVSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVF 62
Query: 200 KDVE-IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
+ V ++V WN+II A +++ F KALE Y ++ V P++ TF VI +CAGL ++
Sbjct: 63 RRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
+G ++ ++++ E D++VG+ALVD Y++ L A F E+ +++VSWN+LI GY
Sbjct: 123 EMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGY 182
Query: 319 ASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYE 373
+S ++ + EL P+ FT S VL + +++ LH ++ G +
Sbjct: 183 SSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVS 242
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL-LSQLE 432
V L+ Y K +DA + + +V +I G Y + E+VK+ L L+
Sbjct: 243 VVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICG-YLKLEMVEESVKMFLENLD 301
Query: 433 --RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+PDI++ V+ AC H D L L KY IY NY L G
Sbjct: 302 QFKPDILTVTSVLCACGHLRD----LSLAKY-----IY--NYM-------------LRAG 337
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
L +K N+LID+Y KCG + ++ +FN M ++ ++W ++IS
Sbjct: 338 FVLESTVK------------NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQ 385
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
+G A++ F+ M + + D + + +++ ++ G L +S G+ ++
Sbjct: 386 SGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKS-GIYIDLS 444
Query: 611 HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ ++D+ + G + ++ KI +M + + W T + C R
Sbjct: 445 VSNALIDMYAKCGEVGDSLKIFNSMG-TLDTVTWNTVISACVR 486
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 208/658 (31%), Positives = 329/658 (50%), Gaps = 47/658 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
MPDR+VVS+ ++I G+ D++ +F M N G P +FT GL +C ++ G
Sbjct: 173 MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLG 232
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A K GL D FVG+AL+ LY + G ++ +F MP ++ VTWN +++ + +
Sbjct: 233 KQMHAQAFKLGLL-LDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQ 291
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G V + LFC ++ +V E + V+ G +N ++L+ G+ IH L+IK G++ +
Sbjct: 292 RGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFI 351
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
LV+MY +C A +FK ++ D+V W+ +I L + ++++L+ M +
Sbjct: 352 GCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDT 411
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PNQ T ++++ N G+SIHA V K E DV V +ALV Y K +
Sbjct: 412 LPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTK 471
Query: 299 CFSEISNKNIVSWNALILGYAS---KSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLA 354
+ + +++++SWNA + G P +IF +L+ G+ PN +TF +L S S
Sbjct: 472 LYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFY--HMLEEGFIPNMYTFISILGSCSCL 529
Query: 355 FQL---LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANI 410
F + Q+H II+ ++ +V +L+ YAK + DA +AF
Sbjct: 530 FDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAF--------------- 574
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
++L D+ +W ++I A ++ L F+ M+ + P+
Sbjct: 575 ------------------NRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPN 616
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+T LS CS L +L G LH ++ K+ + SD FV + L+DMY KCG + + +F
Sbjct: 617 EFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHV-SDMFVGSALVDMYAKCGCMEEAEALF 675
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ R+ I W +I NG +AL FR M G PD V +L+AC H GLV
Sbjct: 676 EALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVE 735
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
EG E F M R +G+ P +DH C+VD+L R G E E I M NALIW T L
Sbjct: 736 EGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVL 793
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/576 (25%), Positives = 280/576 (48%), Gaps = 44/576 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
MP++N V++N +++ Y++ G V L++F M+ + +FT +L +S N +G
Sbjct: 274 MPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQG 333
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + ++K G + + F+G L+ +Y + G + + VF+ + + +V W+++++ +
Sbjct: 334 QVIHSLIIKCG-YEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQ 392
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E+ + LF + + + + ++ +N +L++G+ IH V K GF+ ++ V
Sbjct: 393 QGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAV 452
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N+LV MY + + K+++ + RD++SWN + L + + + L ++ M +
Sbjct: 453 SNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGF 512
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN TF+ ++ SC+ L + G+ +HA +IKN L+ + FV +AL+D YAKC LE A +
Sbjct: 513 IPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADV 572
Query: 299 CFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+ +S +++ +W +I YA + ++ ++ Q G +PNEFT + L +
Sbjct: 573 AFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLAS 632
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L QLH ++ + G+ + +V +L+ YAK G + +A A AL I R +
Sbjct: 633 LEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTI------- 684
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+WN +I A NG + L F+ M I PD T
Sbjct: 685 ------------------------AWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVT 720
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F +LSACS + G + + IS C ++D+ G+ G +M
Sbjct: 721 FTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKM 780
Query: 534 T-DRNVITWTALISALGLNG---FAQRALEKFREME 565
+N + W ++ A ++ ++A K E++
Sbjct: 781 QLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQ 816
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/582 (26%), Positives = 266/582 (45%), Gaps = 40/582 (6%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D+ + +L+ +Y + V MP + +V+W +++ GF D ++LF E+
Sbjct: 146 DSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQ 205
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
+ E + + S L+ G+Q+H K G +L V ++LV++Y +C I
Sbjct: 206 NEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIE 265
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
A KMF + ++ V+WN ++ A+ + L+L+ M V N+ T V+ CA
Sbjct: 266 LASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCA 325
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+N G+ IH+ +IK E + F+G LVD Y+KC A F I +IV W+A
Sbjct: 326 NSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSA 385
Query: 314 LILGYASKSSPTSIFLLIELLQLGYR-PNEFTFSHVLRSSLAFQLLQ----LHCLIIRMG 368
LI + L L++LG PN++T +L ++ LQ +H + + G
Sbjct: 386 LITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYG 445
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
+E V +L+T Y K+G + D KL
Sbjct: 446 FETDVAVSNALVTMYMKNGCVHDG--------------------------------TKLY 473
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
+ D++SWN ++ G Y L +F +M P+ YTF+S+L +CS L ++
Sbjct: 474 ESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVH 533
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G +H I K + + + FVC LIDMY KC + + FN ++ R++ TWT +I+
Sbjct: 534 YGRQVHAHIIKNQ-LDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNY 592
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
++AL FR+M+ G KP+ L L+ C + G +L + +S G +
Sbjct: 593 AQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKS-GHVSD 651
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
M +VD+ + G ++EAE + + + + W T + G
Sbjct: 652 MFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICG 692
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 136/437 (31%), Positives = 209/437 (47%), Gaps = 38/437 (8%)
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
++++ L + IHGL++K+ + + + SLVN+Y +C A + + RDVVSW
Sbjct: 123 ASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWT 182
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
+I L ++ L+ M + + PN+ T + +C+ LGK +HA+ K
Sbjct: 183 ALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKL 242
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LL 330
L D+FVGSALVD YAKC +E A F + +N V+WN L+ GYA + T + L
Sbjct: 243 GLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLF 302
Query: 331 IELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKS 386
+++L + NEFT + VL+ + L+ +H LII+ GYE E++ L+ Y+K
Sbjct: 303 CSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKC 362
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
GL DA+ + P VV W+ +I
Sbjct: 363 GLAIDAIGVFKTIKKPDIVV--------------------------------WSALITCL 390
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
G +E ++LF MR P+ YT SLLSA + NL G S+H + K +D
Sbjct: 391 DQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYG-FETD 449
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
V N L+ MY K G + K++ M DR++I+W A +S L G R L F M
Sbjct: 450 VAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLE 509
Query: 567 LGFKPDRVALIAVLTAC 583
GF P+ I++L +C
Sbjct: 510 EGFIPNMYTFISILGSC 526
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 212/664 (31%), Positives = 337/664 (50%), Gaps = 50/664 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG------GLLSCDSLN 54
MPDRNVVS+ S++ YS G E+ + ++ M G + + GLL +SL
Sbjct: 103 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL- 161
Query: 55 PVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
G Q+ V+K+GL A V +L+ + G G +D +F+ M + ++WNSI +
Sbjct: 162 ---GRQIIGQVVKSGLESKLA-VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 217
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ ++G +E+ +F + R + ++ ++ L + ++G IHGLV+K GFD
Sbjct: 218 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 277
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ V N+L+ MY A +FK + +D++SWN+++ + AL L M
Sbjct: 278 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 337
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
N TF + +C G+ +H V+ + L + +G+ALV Y K +
Sbjct: 338 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 397
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSL 353
+ ++ +++V+WNALI GYA P + +++ G N T VL + L
Sbjct: 398 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 457
Query: 354 -AFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
LL+ LH I+ G+E+ E+V SL+T YAK G +S +
Sbjct: 458 LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSS---------------Q 502
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
++ G+ NR +I++WN ++AA AH+G +EVL+L MR+ +
Sbjct: 503 DLFNGLDNR-----------------NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 545
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
D ++F LSA +KL L G LHGL K D+F+ N DMY KCG IG VK
Sbjct: 546 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF-EHDSFIFNAAADMYSKCGEIGEVVK 604
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+ +R++ +W LISALG +G+ + F EM +G KP V +++LTAC HGGL
Sbjct: 605 MLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGL 664
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
V +G+ ++ + R +G+EP ++H CV+DLL R G L EAE I+ MP PN L+WR+ L
Sbjct: 665 VDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLL 724
Query: 649 EGCQ 652
C+
Sbjct: 725 ASCK 728
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 179/647 (27%), Positives = 310/647 (47%), Gaps = 45/647 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV--E 57
MP RN VS+N+++S R G + + F M + G +P+ F L++ C + E
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ V K+GL +D +V TA+L LYG +G + VFE+MP +++V+W S++ +
Sbjct: 61 GVQVHGFVAKSGLL-SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G E+ + ++ + V E+S VI +D G QI G V+K+G + +L
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY--LRMSV 235
V NSL++M + A +F + RD +SWN+I A A++ + ++ ++ +R
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D V N TT +++ + + G+ IH V+K + V V + L+ YA
Sbjct: 240 DEV--NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 297
Query: 296 AHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A+L F ++ K+++SWN+L+ + + S ++ LL ++ G N TF+ L +
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+ + G I L V+ L + + N + +
Sbjct: 358 --------------------------PDFFEKGRILHGLVVVSGLFYNQII--GNALVSM 389
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y + G+ +E+ ++L Q+ R D+V+WN +I A + D + L F+ MR + + T
Sbjct: 390 YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 449
Query: 475 VSLLSACSKLCN-LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
VS+LSAC + L G LH I SD V N LI MY KCG + SS +FN +
Sbjct: 450 VSVLSACLLPGDLLERGKPLHAYIVSAG-FESDEHVKNSLITMYAKCGDLSSSQDLFNGL 508
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+RN+ITW A+++A +G + L+ +M G D+ + L+A ++ EG
Sbjct: 509 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 568
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
+L + G E + ++ D+ + G + E K++ PP+
Sbjct: 569 QL-HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML-----PPS 609
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 164/590 (27%), Positives = 288/590 (48%), Gaps = 48/590 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
M +R+ +S+NSI +AY++ G++E++ R+F M E T LLS L V+
Sbjct: 204 MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV--LGHVDHQK 261
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G + V+K G F + V LL +Y G E VF+ MP K L++WNS+++ F
Sbjct: 262 WGRGIHGLVVKMG-FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF 320
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G D + L C ++ S ++ +F + E G +HGLV+ +G Y
Sbjct: 321 VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ 380
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++ N+LV+MY + + + ++ + RDVV+WN +IG AE E+ KAL + M V+
Sbjct: 381 IIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE 440
Query: 237 IVFPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
V N T V V+++C L +L GK +HA ++ E D V ++L+ YAKC +L
Sbjct: 441 GVSSNYITVVSVLSACL-LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 499
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSL 353
+ F+ + N+NI++WNA++ A + L+ ++ G ++F+FS L ++
Sbjct: 500 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 559
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+L QLH L +++G+E+ ++ N
Sbjct: 560 KLAVLEEGQQLHGLAVKLGFEHDSFIF--------------------------------N 587
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
A +Y++ G+ E VK+L + SWNI+I+A +G ++EV F M I P
Sbjct: 588 AAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKP 647
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ TFVSLL+ACS + G + + +I + + C +ID+ G+ G + +
Sbjct: 648 GHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETF 707
Query: 530 FNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
++M + N + W +L+++ ++G R + + L + D V +++
Sbjct: 708 ISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 757
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 206/673 (30%), Positives = 349/673 (51%), Gaps = 55/673 (8%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG----FEPTQFTFGGLLSCDSLNPVE 57
P R+++++N+++S Y++ GYV +F+ M++ P + TFG L++ SL+
Sbjct: 226 PVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCS 285
Query: 58 GA---QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
Q+ A VLK+G +D +VG+AL+ + RHG LDE +F ++ ++ VT N ++
Sbjct: 286 SGVLDQVFARVLKSG-SSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIV 344
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN----EQDLEFGEQIHGLVIKN 170
K E+ + +F R + +FV ++ ++ E L G ++HG +++
Sbjct: 345 GLVKQHCSEEAVGIFMG-TRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRT 403
Query: 171 GF-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
G D ++ ++N LVNMY +C I A ++F+ + RD VSWNTII L ++ A+
Sbjct: 404 GLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMN 463
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
Y M + P+ + ++SCA L+ G+ +H +K L+ D V +ALV Y
Sbjct: 464 YCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGD 523
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT--SIFLLIELLQLGYRPNEFTFSH 347
C + F+ ++ +IVSWN+++ S +PT S+ + +++ G PN+ TF +
Sbjct: 524 CGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVN 583
Query: 348 VLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
+L + +L Q+H ++++ G V +LM+ YAKSG
Sbjct: 584 LLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSG---------------- 627
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
+ +L S + R D VSWN +I+ +NG +E ++ M
Sbjct: 628 ----------------DMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLM 671
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ D TF +L+AC+ + L G +H ++++ SD V + L+DMY KCG
Sbjct: 672 MHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQL-ESDVVVESALLDMYSKCGR 730
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
I + K+FN M+ +N +W ++IS +G ++ALE F EM+ G PD V ++VL+A
Sbjct: 731 IDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSA 790
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H GLV G++ FE M +G+ P ++HY CV+DLL R G L + ++ I MP PN L
Sbjct: 791 CSHAGLVDRGLDYFEMM-EDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTL 849
Query: 643 IWRTFLEGCQRCR 655
IWRT L C++ +
Sbjct: 850 IWRTVLVACRQSK 862
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 150/626 (23%), Positives = 284/626 (45%), Gaps = 41/626 (6%)
Query: 39 PTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVF 98
P GLL +L ++K GL D F+ L+ LY + L VF
Sbjct: 56 PPVHPHAGLLLPRRGEEAAPERLHLELVKRGL-THDLFLSNHLVNLYAKGSRLAAARQVF 114
Query: 99 EDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV--RSEVAL-TESSFVGVIHGLSNEQ 155
+ M ++ V+W +VS + G ++ +F ++ SE + T +F V+ +
Sbjct: 115 DGMLERNAVSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAG 174
Query: 156 D--LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA-GI-WSAEKMFKDVEIRDVVSWN 211
L F Q+HGLV K + V N+L++MY C+ G+ A+++F +RD+++WN
Sbjct: 175 PDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWN 234
Query: 212 TIIGALAESENFGKALELYLRMSVDI----VFPNQTTFVYVI--NSCAGLQNSILGKSIH 265
++ A+ L++ M D + PN+ TF +I S + + +L + +
Sbjct: 235 ALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQ-VF 293
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT 325
A+V+K+ D++VGSALV +A+ L+ A F + +N V+ N LI+G +
Sbjct: 294 ARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSE 353
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAK 385
+ + + N TF +L + F + + + G E + ++L +
Sbjct: 354 EAVGIFMGTRDSFVVNTDTFVVLLSAVAEFSIPEDGLM---RGREVHGHIL--------R 402
Query: 386 SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA 445
+GLI +A +N + +Y + G ++ ++ L D VSWN +I+
Sbjct: 403 TGLIDLKIAL------------SNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISV 450
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
NG + + + MR I P N+ +S LS+C+ L L G +H K +
Sbjct: 451 LDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWG-LDL 509
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL-GLNGFAQRALEKFREM 564
DT V N L+ MYG CG+ S +IFN M + ++++W +++ + + ++E F M
Sbjct: 510 DTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNM 569
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
G P++V + +L+A ++ G ++ + + +E + ++ + G
Sbjct: 570 MRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVD-NALMSCYAKSGD 628
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEG 650
+ E++ ++M +A+ W + + G
Sbjct: 629 MDSCEQLFSSMSGRRDAVSWNSMISG 654
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M +N S+NS+IS Y+R G E AL +F M G P TF +LS C V+
Sbjct: 741 MSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRG 800
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIV 113
++++ + ++ L GR G L ++ MP K + + W +++
Sbjct: 801 LDYFEMMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVL 855
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 212/664 (31%), Positives = 337/664 (50%), Gaps = 50/664 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG------GLLSCDSLN 54
MPDRNVVS+ S++ YS G E+ + ++ M G + + GLL +SL
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL- 178
Query: 55 PVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
G Q+ V+K+GL A V +L+ + G G +D +F+ M + ++WNSI +
Sbjct: 179 ---GRQIIGQVVKSGLESKLA-VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 234
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ ++G +E+ +F + R + ++ ++ L + ++G IHGLV+K GFD
Sbjct: 235 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 294
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ V N+L+ MY A +FK + +D++SWN+++ + AL L M
Sbjct: 295 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 354
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
N TF + +C G+ +H V+ + L + +G+ALV Y K +
Sbjct: 355 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 414
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSL 353
+ ++ +++V+WNALI GYA P + +++ G N T VL + L
Sbjct: 415 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 474
Query: 354 -AFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
LL+ LH I+ G+E+ E+V SL+T YAK G +S +
Sbjct: 475 LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSS---------------Q 519
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
++ G+ NR +I++WN ++AA AH+G +EVL+L MR+ +
Sbjct: 520 DLFNGLDNR-----------------NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 562
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
D ++F LSA +KL L G LHGL K D+F+ N DMY KCG IG VK
Sbjct: 563 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF-EHDSFIFNAAADMYSKCGEIGEVVK 621
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+ +R++ +W LISALG +G+ + F EM +G KP V +++LTAC HGGL
Sbjct: 622 MLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGL 681
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
V +G+ ++ + R +G+EP ++H CV+DLL R G L EAE I+ MP PN L+WR+ L
Sbjct: 682 VDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLL 741
Query: 649 EGCQ 652
C+
Sbjct: 742 ASCK 745
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 177/645 (27%), Positives = 307/645 (47%), Gaps = 41/645 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV--E 57
MP RN VS+N+++S R G + + F M + G +P+ F L++ C + E
Sbjct: 18 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 77
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ V K+GL +D +V TA+L LYG +G + VFE+MP +++V+W S++ +
Sbjct: 78 GVQVHGFVAKSGLL-SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 136
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G E+ + ++ + V E+S VI +D G QI G V+K+G + +L
Sbjct: 137 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 196
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V NSL++M + A +F + RD +SWN+I A A++ + ++ ++ M
Sbjct: 197 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 256
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
N TT +++ + + G+ IH V+K + V V + L+ YA A+
Sbjct: 257 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 316
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
L F ++ K+++SWN+L+ + + S ++ LL ++ G N TF+ L +
Sbjct: 317 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT-- 374
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
+ + G I L V+ L + + N + +Y
Sbjct: 375 ------------------------PDFFEKGRILHGLVVVSGLFYNQII--GNALVSMYG 408
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G+ +E+ ++L Q+ R D+V+WN +I A + D + L F+ MR + + T VS
Sbjct: 409 KIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVS 468
Query: 477 LLSACSKLCN-LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
+LSAC + L G LH I SD V N LI MY KCG + SS +FN + +
Sbjct: 469 VLSACLLPGDLLERGKPLHAYIVSAG-FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN 527
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
RN+ITW A+++A +G + L+ +M G D+ + L+A ++ EG +L
Sbjct: 528 RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 587
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
+ G E + ++ D+ + G + E K++ PP+
Sbjct: 588 -HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML-----PPS 626
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 164/590 (27%), Positives = 288/590 (48%), Gaps = 48/590 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
M +R+ +S+NSI +AY++ G++E++ R+F M E T LLS L V+
Sbjct: 221 MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV--LGHVDHQK 278
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G + V+K G F + V LL +Y G E VF+ MP K L++WNS+++ F
Sbjct: 279 WGRGIHGLVVKMG-FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF 337
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G D + L C ++ S ++ +F + E G +HGLV+ +G Y
Sbjct: 338 VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ 397
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++ N+LV+MY + + + ++ + RDVV+WN +IG AE E+ KAL + M V+
Sbjct: 398 IIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE 457
Query: 237 IVFPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
V N T V V+++C L +L GK +HA ++ E D V ++L+ YAKC +L
Sbjct: 458 GVSSNYITVVSVLSACL-LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 516
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSL 353
+ F+ + N+NI++WNA++ A + L+ ++ G ++F+FS L ++
Sbjct: 517 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 576
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+L QLH L +++G+E+ ++ N
Sbjct: 577 KLAVLEEGQQLHGLAVKLGFEHDSFIF--------------------------------N 604
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
A +Y++ G+ E VK+L + SWNI+I+A +G ++EV F M I P
Sbjct: 605 AAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKP 664
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ TFVSLL+ACS + G + + +I + + C +ID+ G+ G + +
Sbjct: 665 GHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETF 724
Query: 530 FNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
++M + N + W +L+++ ++G R + + L + D V +++
Sbjct: 725 ISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 774
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 135/574 (23%), Positives = 269/574 (46%), Gaps = 46/574 (8%)
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
+Y + G + +F+ MP ++ V+WN+++S + G + M F ++ ++ + SS
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC--DLGIKPSS 58
Query: 144 FV--GVIHGLSNEQDL-EFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
FV ++ + G Q+HG V K+G ++ V+ +++++Y + + K+F+
Sbjct: 59 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
++ R+VVSW +++ ++ + +++Y M + V N+ + VI+SC L++ L
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
G+ I +V+K+ LE + V ++L+ N++ A+ F ++S ++ +SWN++ YA
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 321 KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ-----LHCLIIRMGYENYEYV 375
F + L++ + T L S L Q +H L+++MG+++ V
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
+L+ YA +G V AN++ Q+ D
Sbjct: 299 CNTLLRMYAGAG----------------RSVEANLV----------------FKQMPTKD 326
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
++SWN ++A+ ++G + L L M ++ + TF S L+AC G LHG
Sbjct: 327 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 386
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
L+ + + + + N L+ MYGK G + S ++ +M R+V+ W ALI +
Sbjct: 387 LVVVSGLF-YNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPD 445
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTAC-RHGGLVREGMELFERMNRSYGVEPEMDHYHC 614
+AL F+ M G + + +++VL+AC G L+ G L + S G E + +
Sbjct: 446 KALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYI-VSAGFESDEHVKNS 504
Query: 615 VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
++ + + G L ++ + + N + W L
Sbjct: 505 LITMYAKCGDLSSSQDLFNGLD-NRNIITWNAML 537
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 209/656 (31%), Positives = 334/656 (50%), Gaps = 42/656 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEG 58
MP+RNVVS+ +++ A S GY+E+ LR + M G F ++S C SL N V G
Sbjct: 105 MPERNVVSWTALMVALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPG 164
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + V+ +GL V +L+ ++G G + + +F+ M ++ N+++S++
Sbjct: 165 LQVASHVIVSGLQ-NQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSH 223
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G C +F ++ + ++ ++ ++ G IH L +++ D + V
Sbjct: 224 QGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTV 283
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LVNMY + AE +F ++ RD++SWNT+I + ++ N AL+ ++
Sbjct: 284 INALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNE 343
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN TF + +C+ I GK +HA V++ +L+ ++ VG++L+ Y KC+++E A
Sbjct: 344 IPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEK 403
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQL 357
F + ++VS+N LI GYA T + ++ G +PN T ++ S +
Sbjct: 404 VFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSND 463
Query: 358 LQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L LH IIR G+ + EYV SL+T YAK G + + NI
Sbjct: 464 LHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESS---------------TNIFN 508
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
I N+ +IVSWN +IAA A G +E L+LF M+ A D
Sbjct: 509 SITNK-----------------NIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRV 551
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
LS+C+ L +L G LHGL K+ + SD++V N +DMYGKCG + +++ +
Sbjct: 552 CLAECLSSCASLASLEEGMQLHGLGMKSGL-DSDSYVVNAAMDMYGKCGKMNEMLQMVPD 610
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
R W LIS G+ + A E F++M +G KPD V +A+L+AC H GLV +G
Sbjct: 611 QAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKG 670
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
++ + M S+GV P + H C+VDLL R G EAE+ I MP PN LIWR+ L
Sbjct: 671 IDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRSLL 726
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 174/661 (26%), Positives = 317/661 (47%), Gaps = 47/661 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEG- 58
MPDR ++ + +S RCG A + M RG + F L++ C+ EG
Sbjct: 1 MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 59 ---AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
A + A + GL + ++GTALL LYG G + + +F +MP +++V+W +++
Sbjct: 61 ACGAAIHALTHRAGLM-GNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVA 119
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+G++E+ + + ++ R V ++F V+ + ++ G Q+ VI +G +
Sbjct: 120 LSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQ 179
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ VANSL+ M+ + AEK+F +E D +S N +I + K ++ M
Sbjct: 180 VSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRH 239
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ P+ TT +++ CA + G IH+ ++++L+ V V +ALV+ Y+ L
Sbjct: 240 HGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSD 299
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F +S ++++SWN +I Y + T ++ L +L PN TFS L + +
Sbjct: 300 AEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSS 359
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
L +H +++++ + V SL+T Y K + DA
Sbjct: 360 PGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDA------------------ 401
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
K+ + D+VS+N++I A D + +++F ++R+A I P+
Sbjct: 402 --------------EKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPN 447
Query: 471 NYTFVSLLSACSKLCNLA-LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
T +++ + + +L G LH I +T + SD +V N LI MY KCG++ SS I
Sbjct: 448 YITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFL-SDEYVANSLITMYAKCGNLESSTNI 506
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
FN +T++N+++W A+I+A G + AL+ F +M+ G K DRV L L++C +
Sbjct: 507 FNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASL 566
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EGM+L +S G++ + + +D+ + G + E +++ P W T +
Sbjct: 567 EEGMQLHGLGMKS-GLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRPQQ-CWNTLIS 624
Query: 650 G 650
G
Sbjct: 625 G 625
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 197/658 (29%), Positives = 331/658 (50%), Gaps = 65/658 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP R+VV +N ++ AY G ++ L +F G P C S+ +
Sbjct: 183 MPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRP---------DCVSVRTILMGV 233
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ +V + L A+ + C D+ + WN +S + + G
Sbjct: 234 GKKTVFERELEQVRAYATKLFV-------CDDD----------SDVTVWNKTLSSYLQAG 276
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + F ++++S V +++ ++ +++ LE G+QIHG V++ G+D + VAN
Sbjct: 277 EGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVAN 336
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
S +NMY + + A +MF ++ D++SWNT+I A S +L L++ + + P
Sbjct: 337 SAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLP 396
Query: 241 NQTTFVYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
+Q T V+ +C+ L+ S +G+ +H +K + D FV +AL+D Y+K +E A L
Sbjct: 397 DQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELL 456
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAF--- 355
F ++ SWNA++ G+ + L L+ + G + ++ TF++ +++
Sbjct: 457 FHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRL 516
Query: 356 -QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q Q+H ++I+M + +V+ ++ Y K G + A
Sbjct: 517 QQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSAR--------------------- 555
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
K+ +Q+ PD V+W VI+ C NG+ ++ L + MR A + PD YTF
Sbjct: 556 -----------KVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTF 604
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+L+ ACS L L G +H I K + D FV L+DMY KCG+I + +F M
Sbjct: 605 ATLVKACSLLTALEQGKQIHANIMKLNC-AFDPFVMTSLVDMYAKCGNIEDAYGLFRRMN 663
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
R+V W A+I L +G A+ AL F EM+ G PDRV I VL+AC H GL + +
Sbjct: 664 TRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYK 723
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+ M ++YGVEPE++HY C+VD L R GH++EAEK++++MPF +A ++RT L C+
Sbjct: 724 NFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACR 781
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 162/659 (24%), Positives = 294/659 (44%), Gaps = 71/659 (10%)
Query: 3 DRNVVSFNSIISAYSRCGYVED------ALRMFLYMINRGFEPTQFTFGGLLSCDSL--N 54
DR++V++N+I++AY+ G + D A +F + T+ T L L +
Sbjct: 78 DRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGS 137
Query: 55 PVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
P LQ +K GL D FV AL+ +Y + + E +F+ MP + +V WN ++
Sbjct: 138 PSASEALQGYAVKIGLQW-DVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMK 196
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + G ++ + LF RS + S ++ G+ K F+
Sbjct: 197 AYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGK---------------KTVFER 241
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
EL V Y A K+F + DV WN + + ++ +A++ + M
Sbjct: 242 EL----EQVRAY--------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMI 289
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
V + T++ +++ A L + LGK IH V++ + V V ++ ++ Y K ++
Sbjct: 290 KSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVN 349
Query: 295 GAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F ++ +++SWN +I G A S S+ L I+LL+ G P++FT + VLR+
Sbjct: 350 YARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACS 409
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIA 412
+ + Y +G + + A K+G++ D +FV+ I
Sbjct: 410 SLE---------------ESYCVGRQVHTCALKAGIVLD--SFVSTALID---------- 442
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y++ G+ E L + D+ SWN ++ + +Y+E L LF M D
Sbjct: 443 -VYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQI 501
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF + A L L G +H ++ K D FV + ++DMY KCG + S+ K+FN+
Sbjct: 502 TFANAAKAAGCLVRLQQGKQIHAVVIKMR-FHYDLFVISGILDMYLKCGEMKSARKVFNQ 560
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ + + WT +IS NG ++AL + +M G +PD ++ AC + +G
Sbjct: 561 IPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQG 620
Query: 593 MELFER-MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++ M + +P + +VD+ + G++++A + M AL W + G
Sbjct: 621 KQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTRSVAL-WNAMIVG 676
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 219/456 (48%), Gaps = 33/456 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNP--VE 57
M + +++S+N++IS +R G E +LR+F+ ++ G P QFT +L +C SL
Sbjct: 358 MKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCV 417
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ LK G+ D+FV TAL+ +Y + G ++E +F + L +WN+++ F
Sbjct: 418 GRQVHTCALKAGIVL-DSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFT 476
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + LF + + +F L+ G+QIH +VIK F Y+L
Sbjct: 477 VSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLF 536
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V + +++MY +C + SA K+F + D V+W T+I E+ +AL Y +M +
Sbjct: 537 VISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAG 596
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P++ TF ++ +C+ L GK IHA ++K D FV ++LVD YAKC N+E A+
Sbjct: 597 VQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAY 656
Query: 298 LCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F ++ +++ WNA+I+G A ++ ++ E+ G P+ TF VL +
Sbjct: 657 GLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSAC---- 712
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
H + Y+N++ S+ +Y I V AL +
Sbjct: 713 ---SHSGLTSDAYKNFD----SMQKTYGVEPEIEHYSCLVDAL----------------S 749
Query: 417 RTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
R G E K++S + + ++ AC GD
Sbjct: 750 RAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGD 785
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/560 (23%), Positives = 248/560 (44%), Gaps = 71/560 (12%)
Query: 154 EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK--DVEIRDVVSWN 211
+ DL G++ H +++ +G + + V N+L+ MY +C ++SA K+F RD+V++N
Sbjct: 26 DSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYN 85
Query: 212 TIIGALAES------ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
I+ A A + E +A ++ + ++ + T + C + +++
Sbjct: 86 AILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQ 145
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT 325
+K L+ DVFV ALV+ YAK + A + F + +++V WN ++ Y +
Sbjct: 146 GYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGD 205
Query: 326 SIFLLIELLQL-GYRPNEFTFSHVL-----RSSLAFQLLQLHCLIIRM---GYENYEYVL 376
+ L G RP+ + +L ++ +L Q+ ++ ++ V
Sbjct: 206 EVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVW 265
Query: 377 GSLMTSYAKSG----------------LISDALAFVTALNI------------------- 401
++SY ++G + D+L ++ L++
Sbjct: 266 NKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVR 325
Query: 402 ---PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
+ V AN +Y + G N ++ Q++ D++SWN VI+ CA +G + L L
Sbjct: 326 FGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRL 385
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKL-CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
F + + + PD +T S+L ACS L + +G +H K I+ D+FV LID+Y
Sbjct: 386 FIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIV-LDSFVSTALIDVY 444
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
K G + + +F+ ++ +W A++ ++ + AL F M G K D++
Sbjct: 445 SKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFA 504
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMD-HYHC-----VVDLLVRYGHLKEAEKI 631
A G LVR ++ + + V +M HY ++D+ ++ G +K A K+
Sbjct: 505 NAAKAA--GCLVR-----LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKV 557
Query: 632 ITTMPFPPNALIWRTFLEGC 651
+P P+ + W T + GC
Sbjct: 558 FNQIP-SPDDVAWTTVISGC 576
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 155/408 (37%), Gaps = 75/408 (18%)
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF--SEISNKNIVSWNALIL 316
ILGK HA ++ + L D +V + L+ YAKC +L A F + S++++V++NA++
Sbjct: 30 ILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILA 89
Query: 317 GYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
YA EL + F +LR S+ + ++ +
Sbjct: 90 AYAHTG---------ELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCL-----LY 135
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
GS S A G + + + V A + IY + + E L ++ D+
Sbjct: 136 GSPSASEALQG-------YAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDV 188
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
V WN+++ A G EVL LF + + PD + ++L K +
Sbjct: 189 VLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGK------KTVFERE 242
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
+++ ++ FVC+ D +V W +S+ G
Sbjct: 243 LEQVRAYATKLFVCD----------------------DDSDVTVWNKTLSSYLQAGEGWE 280
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACR-----------HGGLVREGMELFERMNRSYGV 605
A++ FR+M D + I +L+ HG +VR G + F + S
Sbjct: 281 AVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANS--- 337
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+++ V+ G + A ++ M + + W T + GC R
Sbjct: 338 ---------AINMYVKAGSVNYARRMFGQMK-EVDLISWNTVISGCAR 375
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 203/652 (31%), Positives = 345/652 (52%), Gaps = 30/652 (4%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ 60
P +NV +NSII A+S+ G +AL + + P ++TF ++ +C L E
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L + + F +D FVG AL+ +Y R G L VF++MP + LV+WNS++S + HG
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ E+ + ++ EL S + + V+ N ++ G+ +HG +K+G + ++V N
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
LV MY + A ++F ++++RD VS+NT+I + E +++ ++L ++D P
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKP 305
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T V+ +C L++ L K I+ ++K + V + L+D YAKC ++ A F
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
+ + K+ VSWN++I GY L+E ++L F ++ A + L
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGD------LMEAMKL------FKMMMIMEEQ-ADHITYL 412
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
+ + + ++ G L ++ KSG+ D + +N + +Y + G+
Sbjct: 413 MLISVSTRLADLKFGKG-LHSNGIKSGICID-------------LSVSNALIDMYAKCGE 458
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+++K+ S + D V+WN VI+AC GD+ L++ MR + + PD TF+ L
Sbjct: 459 VGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPM 518
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C+ L LG +H + + S+ + N LI+MY KCG + +S ++F M+ R+V+T
Sbjct: 519 CASLAAKRLGKEIHCCLLRFGY-ESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVT 577
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
WT +I A G+ G ++ALE F +ME G PD V IA++ AC H GLV EG+ FE+M
Sbjct: 578 WTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMK 637
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y ++P ++HY CVVDLL R + +AE+ I MP P+A IW + L C+
Sbjct: 638 THYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACR 689
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 165/598 (27%), Positives = 282/598 (47%), Gaps = 36/598 (6%)
Query: 40 TQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE 99
+ F L S +LN E ++ A V+ GL +D F G L+ Y +SVF
Sbjct: 7 SPFISRALSSSSNLN--ELRRIHALVISLGLDSSDFFSGK-LIDKYSHFREPASSLSVFR 63
Query: 100 DM-PRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLE 158
+ P K++ WNSI+ F K+G + + + +L S+V+ + +F VI + D E
Sbjct: 64 RVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE 123
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
G+ ++ ++ GF+ +L V N+LV+MY + + A ++F ++ +RD+VSWN++I +
Sbjct: 124 MGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYS 183
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ +ALE+Y + + P+ T V+ + L G+ +H +K+ + V
Sbjct: 184 SHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVV 243
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLG 337
V + LV Y K A F E+ ++ VS+N +I GY + S+ + +E L
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-Q 302
Query: 338 YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
++P+ T S VLR+ + L L I Y Y+L K+G + ++
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYI-------YNYML--------KAGFVLESTV--- 344
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
NI+ +Y + G + + +E D VSWN +I+ +GD E ++
Sbjct: 345 ----------RNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMK 394
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
LFK M D+ T++ L+S ++L +L G LH K+ I D V N LIDMY
Sbjct: 395 LFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGIC-IDLSVSNALIDMY 453
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
KCG +G S+KIF+ M + +TW +ISA G L+ +M PD +
Sbjct: 454 AKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFL 513
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
L C R G E+ + R +G E E+ + ++++ + G L+ + ++ M
Sbjct: 514 VTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFERM 570
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 225/443 (50%), Gaps = 21/443 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M R+ VS+N++I Y + VE+++RMFL +++ F+P T +L +C L + A
Sbjct: 268 MDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLA 326
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + + F ++ V L+ +Y + G + VF M K V+WNSI+S + +
Sbjct: 327 KYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQS 386
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + + M LF ++ E +++ +I + DL+FG+ +H IK+G +L V+
Sbjct: 387 GDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVS 446
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L++MY +C + + K+F + D V+WNT+I A +F L++ +M V
Sbjct: 447 NALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVV 506
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ TF+ + CA L LGK IH +++ E ++ +G+AL++ Y+KC LE +
Sbjct: 507 PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRV 566
Query: 300 FSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTF---------SHVL 349
F +S +++V+W +I Y ++ ++ + G P+ F S ++
Sbjct: 567 FERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLV 626
Query: 350 RSSLA-FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PRAVVP 407
LA F+ ++ H I M E+Y V+ L ++S IS A F+ A+ I P A +
Sbjct: 627 DEGLACFEKMKTHYKIDPM-IEHYACVVDLL----SRSQKISKAEEFIQAMPIKPDASIW 681
Query: 408 ANIIAGIYNRTGQYNETVKLLSQ 430
A+++ RT ET + +S+
Sbjct: 682 ASVLRAC--RTSGDMETAERVSR 702
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 154/610 (25%), Positives = 277/610 (45%), Gaps = 83/610 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
MP R++VS+NS+IS YS GY E+AL ++ + N P FT +L + L +G
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L LK+G+ V L+ +Y + + VF++M + V++N+++ + K
Sbjct: 227 QGLHGFALKSGVNSV-VVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLK 285
Query: 119 HGFVEDCMFLFCELVRS--EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
VE+ + +F E + LT SS V+ + +DL + I+ ++K GF E
Sbjct: 286 LEMVEESVRMFLENLDQFKPDLLTVSS---VLRACGHLRDLSLAKYIYNYMLKAGFVLES 342
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V N L+++Y +C + +A +F +E +D VSWN+II +S + +A++L+ M +
Sbjct: 343 TVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIM 402
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ T++ +I+ L + GK +H+ IK+ + D+ V +AL+D YAKC + +
Sbjct: 403 EEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS 462
Query: 297 HLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLR--SSL 353
FS + + V+WN +I T + + ++ + P+ TF L +SL
Sbjct: 463 LKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASL 522
Query: 354 AFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
A + L ++HC ++R GYE+ + +L+ Y+K G + +
Sbjct: 523 AAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLEN-------------------- 562
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+ ++ ++ R D+V+W +I A G+ ++ LE F M + I PD+
Sbjct: 563 ------------SSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDS 610
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
F++++ ACS GL+ + C + + K
Sbjct: 611 VVFIAIIYACSH----------SGLV-------DEGLACFEKMKTHYK------------ 641
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
D + + ++ L + +A E + M KPD +VL ACR G
Sbjct: 642 --IDPMIEHYACVVDLLSRSQKISKAEEFIQAMP---IKPDASIWASVLRACRTSG---- 692
Query: 592 GMELFERMNR 601
ME ER++R
Sbjct: 693 DMETAERVSR 702
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 6/173 (3%)
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD-RNV 538
A S NL +H L+ + SSD F LID Y SS+ +F ++ +NV
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSD-FFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM-ELFE 597
W ++I A NG ALE + ++ PD+ +V+ AC GL M +L
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMGDLVY 129
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G E ++ + +VD+ R G L A ++ MP + + W + + G
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV-RDLVSWNSLISG 181
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 206/659 (31%), Positives = 339/659 (51%), Gaps = 42/659 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
MP R+VV++N++I+ S+ +A+ F M G EP+ + L C N
Sbjct: 190 MPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELC 249
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V + A V L+ LY + G +D VF+ M + V+W ++++ +
Sbjct: 250 RSIHGYVFRRDFSSA---VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAH 306
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + LF ++ V + + S V + DLE G++IHG ++ D ++LV
Sbjct: 307 NGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILV 366
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
A L+ MY +C A+++F ++ RD+V+W+ II AL ++ +AL L+ M +
Sbjct: 367 ATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKM 426
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+ T + ++ +CA L LGKSIH +K ++ D+ G+ALV YAKC A
Sbjct: 427 KPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALT 486
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+ +S+++IV+WN+LI GYA P +I + +L P+ T V+ +
Sbjct: 487 TFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLND 546
Query: 358 LQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L +H LI+++G+E+ +V +L+ YAK G ++P A
Sbjct: 547 LDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCG------------SLPSAEF------- 587
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++N+T + V +WN++IAA NG KE + F MR +P++ T
Sbjct: 588 LFNKTDFTKDEV------------TWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVT 635
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FVS+L A + L G + H I + + S+T V N LIDMY KCG + S K+FNEM
Sbjct: 636 FVSVLPAAAYLAAFREGMAFHACIIQMGFL-SNTLVGNSLIDMYAKCGQLDYSEKLFNEM 694
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++ ++W A++S ++G RA+ F M+ + D V+ ++VL+ACRH GLV EG
Sbjct: 695 DHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGR 754
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++F M+ Y ++P+++HY C+VDLL R G E I MP P+A +W L C+
Sbjct: 755 KIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCR 813
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 183/658 (27%), Positives = 312/658 (47%), Gaps = 48/658 (7%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGA 59
P+ + + +NS+I AY+R +AL M+ M+ +G EP ++TF +L +LN EG
Sbjct: 90 PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV 149
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + GL D F+G L+ +Y + G L VF+ MP++ +V WN++++ +
Sbjct: 150 WFHGEIDRRGLE-RDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQS 208
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + F + V + S + + G+ ++E IHG V + D+ V+
Sbjct: 209 EDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR--DFSSAVS 266
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L+++Y +C + A ++F + +D VSW T++ A + F + LEL+ +M + V
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
N+ + V + A + GK IH ++ ++ D+ V + L+ YAKC E A
Sbjct: 327 INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLL 358
F + +++V+W+A+I P L + +Q +PN T +L + LL
Sbjct: 387 FWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL 446
Query: 359 QL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+L HC ++ ++ +L++ YAK G + AL
Sbjct: 447 KLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALT-------------------T 487
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+NR + DIV+WN +I A GD +++F +R + I PD T
Sbjct: 488 FNR-------------MSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTM 534
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
V ++ AC+ L +L G+ +HGLI K SD V N LIDMY KCGS+ S+ +FN+ T
Sbjct: 535 VGVVPACALLNDLDQGTCIHGLIVKLG-FESDCHVKNALIDMYAKCGSLPSAEFLFNK-T 592
Query: 535 D--RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
D ++ +TW +I+A NG A+ A+ F +M F P+ V ++VL A + REG
Sbjct: 593 DFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREG 652
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
M F G + ++D+ + G L +EK+ M + + W L G
Sbjct: 653 MA-FHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDH-KDTVSWNAMLSG 708
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 147/603 (24%), Positives = 280/603 (46%), Gaps = 37/603 (6%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L SC LNP+ Q+ A ++ +G + T L+ LY D SVF+ P S
Sbjct: 39 LSSCKHLNPL--LQIHAQIIVSGFKHHHSI--THLINLYSLFHKCDLARSVFDSTPNPSR 94
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
+ WNS++ + + + + ++ +V + + +F V+ + +L+ G HG
Sbjct: 95 ILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGE 154
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
+ + G + ++ + LV+MY + + A ++F + RDVV+WN +I L++SE+ +A
Sbjct: 155 IDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEA 214
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
++ + M + V P+ + + + L N L +SIH V + V G L+D
Sbjct: 215 VDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG--LIDL 272
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTF 345
Y+KC +++ A F ++ +++ VSW ++ GYA + L + ++LG R N+
Sbjct: 273 YSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKV-- 330
Query: 346 SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
S+++ L + + G E + L I +
Sbjct: 331 -----SAVSAFLAAAETIDLEKGKEIHGCALQQ---------------------RIDSDI 364
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+ A + +Y + G+ + +L L+ D+V+W+ +IAA G +E L LF+ M+
Sbjct: 365 LVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQ 424
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
++ P+ T +S+L AC+ L L LG S+H K + + SD L+ MY KCG +
Sbjct: 425 KMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD-MDSDLSTGTALVSMYAKCGFFTA 483
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
++ FN M+ R+++TW +LI+ G A++ F ++ PD ++ V+ AC
Sbjct: 484 ALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACAL 543
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
+ +G + + + G E + + ++D+ + G L AE + F + + W
Sbjct: 544 LNDLDQGTCIHGLIVK-LGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWN 602
Query: 646 TFL 648
+
Sbjct: 603 VII 605
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 230/477 (48%), Gaps = 41/477 (8%)
Query: 138 ALTESSFVGVIHG---LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
+L+ S++ +H LS+ + L QIH +I +GF + + + L+N+Y
Sbjct: 23 SLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDL 81
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A +F + WN++I A S+ + +ALE+Y M + P++ TF +V+ +C G
Sbjct: 82 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
N G H ++ + LE DVF+G+ LVD Y+K +L+ A F ++ +++V+WNA+
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 201
Query: 315 ILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE 373
I G + P +QL G P+ + ++ ++L C I +
Sbjct: 202 IAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIEL-CRSI------HG 254
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
YV +S +GLI +Y++ G + ++ Q+
Sbjct: 255 YVFRRDFSSAVSNGLID-----------------------LYSKCGDVDVARRVFDQMVD 291
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
D VSW ++A AHNG + EVLELF M+ + + + VS A ++ +L G +
Sbjct: 292 QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEI 351
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
HG + I SD V L+ MY KCG + ++F + R+++ W+A+I+AL G+
Sbjct: 352 HGCALQQR-IDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGY 410
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
+ AL F+EM+ KP+RV L+++L AC L++ G + + V+ +MD
Sbjct: 411 PEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI-----HCFTVKADMD 462
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 208/664 (31%), Positives = 353/664 (53%), Gaps = 47/664 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLL-SCDSLNPVE-GAQ 60
+N+ +N+++S Y R DA+ +F+ MI+ F P FT ++ +C + V G
Sbjct: 158 KNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEA 217
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ LK + +D FVG AL+ +YG+ G ++ V VF+ MP+++LV+WNS++ ++G
Sbjct: 218 VHGFALKTKVL-SDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENG 276
Query: 121 FVEDCMFLFCELVRSEVALTE--SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
E+ LF L+ + L ++ V VI + + ++ G HGL +K G EL V
Sbjct: 277 VFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKV 336
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV-DI 237
+SL++MY +C + A +F D ++V+SWN++IG ++ +F A EL +M + D
Sbjct: 337 NSSLLDMYSKCGYLCEARVLF-DTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDK 395
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLEGA 296
V N+ T + V+ C + K IH +++ ++ D V +A V YAKC +L A
Sbjct: 396 VKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYA 455
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAF 355
F + +K + SWNALI G+ P L L++ G P+ FT + +L +
Sbjct: 456 EGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARL 515
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ L ++H ++R G+E E++ SL++ Y + G I ++
Sbjct: 516 KSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKI--------------------LL 555
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
A ++ +E ++V WN +I + N + L++F M +++I+PD
Sbjct: 556 AKLF------------FDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDE 603
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ + L ACS++ L LG LH K+ + + +FV LIDMY KCG + S IF+
Sbjct: 604 ISIIGALGACSQVSALRLGKELHCFAVKSHL-TEHSFVTCSLIDMYAKCGCMEQSQNIFD 662
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ + +TW LI+ G++G ++A+E F+ M+ GF+PD V IA+LTAC H GLV E
Sbjct: 663 RVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAE 722
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G+E +M +G++P+++HY CVVD+L R G L EA +++ +P P++ IW + L C
Sbjct: 723 GLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSC 782
Query: 652 QRCR 655
+ R
Sbjct: 783 RNYR 786
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 164/628 (26%), Positives = 290/628 (46%), Gaps = 55/628 (8%)
Query: 38 EPTQFTFGGLLSCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS 96
+P Q L C +E G ++ + + F D + T L+ +Y +
Sbjct: 91 KPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCL 150
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQ 155
VF RK+L WN+++S + ++ D +F+F E++ +E + VI
Sbjct: 151 VFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVY 210
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
D+ GE +HG +K ++ V N+L+ MY + + SA K+F + R++VSWN+++
Sbjct: 211 DVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMY 270
Query: 216 ALAESENFGKALELY--LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
A E+ F ++ L+ L + + P+ T V VI CA LG H +K L
Sbjct: 271 ACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGL 330
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL 333
++ V S+L+D Y+KC L A + F + + KN++SWN++I GY+ F L+
Sbjct: 331 CGELKVNSSLLDMYSKCGYLCEARVLF-DTNEKNVISWNSMIGGYSKDRDFRGAFELLRK 389
Query: 334 LQL--GYRPNEFTFSHVL---RSSLAF-QLLQLHCLIIRMGY-ENYEYVLGSLMTSYAKS 386
+Q+ + NE T +VL + F +L ++H +R G+ ++ E V + + YAK
Sbjct: 390 MQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKC 449
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
G + Y E V +E + SWN +I
Sbjct: 450 GSL------------------------------HYAEGV--FCGMESKMVSSWNALIGGH 477
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
NG ++ L+L+ MR + + PD +T SLLSAC++L +L+ G +HG + + D
Sbjct: 478 VQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNG-FELD 536
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
F+C L+ +Y +CG I + F+ M ++N++ W +I+ N F AL+ F +M
Sbjct: 537 EFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLS 596
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV----VDLLVRY 622
PD +++I L AC +R G EL + V+ + + V +D+ +
Sbjct: 597 SKIWPDEISIIGALGACSQVSALRLGKEL-----HCFAVKSHLTEHSFVTCSLIDMYAKC 651
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEG 650
G +++++ I + + W + G
Sbjct: 652 GCMEQSQNIFDRVHL-KGEVTWNVLITG 678
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 155/566 (27%), Positives = 272/566 (48%), Gaps = 60/566 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMIN--RGFEPTQFTFGGLLS-CDSLNPVE 57
MP RN+VS+NS++ A G E++ +F ++N G P T ++ C V
Sbjct: 257 MPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVR 316
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G LK GL C + V ++LL +Y + G L E +F D K++++WNS++ +
Sbjct: 317 LGMVFHGLALKLGL-CGELKVNSSLLDMYSKCGYLCEARVLF-DTNEKNVISWNSMIGGY 374
Query: 117 GKHGFVEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DY 174
K L ++ + +V + E + + V+ E ++IHG +++GF
Sbjct: 375 SKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQS 434
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ LVAN+ V Y +C + AE +F +E + V SWN +IG ++ KAL+LYL M
Sbjct: 435 DELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMR 494
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ P+ T ++++CA L++ GK IH +++N E D F+ +LV Y +C +
Sbjct: 495 GSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKIL 554
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A L F + KN+V WN +I G++ P ++ + ++L P+E + L +
Sbjct: 555 LAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACS 614
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
L +LHC ++ + +V SL+ YAK G + +
Sbjct: 615 QVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQS----------------- 657
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
I++R E V+WN++I +G ++ +ELFK M+ A P
Sbjct: 658 --QNIFDRVHLKGE-------------VTWNVLITGYGIHGHGRKAIELFKSMQNAGFRP 702
Query: 470 DNYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
D+ TF++LL+AC+ +A G SL G+ K E + C ++DM G+ G
Sbjct: 703 DSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLE-----HYAC--VVDMLGRAGR 755
Query: 523 IGSSVKIFNEMTDR-NVITWTALISA 547
+ ++++ NE+ D+ + W++L+S+
Sbjct: 756 LNEALELVNELPDKPDSRIWSSLLSS 781
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 3/176 (1%)
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LL C + N+ +G +H I + +D + L+ MY C S S +FN +
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 537 NVITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
N+ W AL+S N + A+ F EM F PD L V+ AC VR G E
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLG-EA 217
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
V ++ + ++ + ++G ++ A K+ MP N + W + + C
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP-QRNLVSWNSVMYAC 272
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 206/659 (31%), Positives = 339/659 (51%), Gaps = 42/659 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
MP R+VV++N++I+ S+ +A+ F M G EP+ + L C N
Sbjct: 190 MPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELC 249
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V + A V L+ LY + G +D VF+ M + V+W ++++ +
Sbjct: 250 RSIHGYVFRRDFSSA---VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAH 306
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + LF ++ V + + S V + DLE G++IHG ++ D ++LV
Sbjct: 307 NGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILV 366
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
A L+ MY +C A+++F ++ RD+V+W+ II AL ++ +AL L+ M +
Sbjct: 367 ATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKM 426
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+ T + ++ +CA L LGKSIH +K ++ D+ G+ALV YAKC A
Sbjct: 427 KPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALT 486
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+ +S+++IV+WN+LI GYA P +I + +L P+ T V+ +
Sbjct: 487 TFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLND 546
Query: 358 LQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L +H LI+++G+E+ +V +L+ YAK G ++P A
Sbjct: 547 LDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCG------------SLPSAEF------- 587
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++N+T + V +WN++IAA NG KE + F MR +P++ T
Sbjct: 588 LFNKTDFTKDEV------------TWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVT 635
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FVS+L A + L G + H I + + S+T V N LIDMY KCG + S K+FNEM
Sbjct: 636 FVSVLPAAAYLAAFREGMAFHACIIQMGFL-SNTLVGNSLIDMYAKCGQLXYSEKLFNEM 694
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++ ++W A++S ++G RA+ F M+ + D V+ ++VL+ACRH GLV EG
Sbjct: 695 DHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGR 754
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++F M+ Y ++P+++HY C+VDLL R G E I MP P+A +W L C+
Sbjct: 755 KIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCR 813
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 183/658 (27%), Positives = 312/658 (47%), Gaps = 48/658 (7%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGA 59
P+ + + +NS+I AY+R +AL M+ M+ +G EP ++TF +L +LN EG
Sbjct: 90 PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV 149
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + GL D F+G L+ +Y + G L VF+ MP++ +V WN++++ +
Sbjct: 150 WFHGEIDRRGLE-RDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQS 208
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + F + V + S + + G+ ++E IHG V + D+ V+
Sbjct: 209 EDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR--DFSSAVS 266
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L+++Y +C + A ++F + +D VSW T++ A + F + LEL+ +M + V
Sbjct: 267 NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
N+ + V + A + GK IH ++ ++ D+ V + L+ YAKC E A
Sbjct: 327 INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLL 358
F + +++V+W+A+I P L + +Q +PN T +L + LL
Sbjct: 387 FWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLL 446
Query: 359 QL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+L HC ++ ++ +L++ YAK G + AL
Sbjct: 447 KLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALT-------------------T 487
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+NR + DIV+WN +I A GD +++F +R + I PD T
Sbjct: 488 FNR-------------MSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTM 534
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
V ++ AC+ L +L G+ +HGLI K SD V N LIDMY KCGS+ S+ +FN+ T
Sbjct: 535 VGVVPACALLNDLDQGTCIHGLIVKLG-FESDCHVKNALIDMYAKCGSLPSAEFLFNK-T 592
Query: 535 D--RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
D ++ +TW +I+A NG A+ A+ F +M F P+ V ++VL A + REG
Sbjct: 593 DFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREG 652
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
M F G + ++D+ + G L +EK+ M + + W L G
Sbjct: 653 MA-FHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDH-KDTVSWNAMLSG 708
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 147/603 (24%), Positives = 280/603 (46%), Gaps = 37/603 (6%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L SC LNP+ Q+ A ++ +G + T L+ LY D SVF+ P S
Sbjct: 39 LSSCKHLNPL--LQIHAQIIVSGFKHHHSI--THLINLYSLFHKCDLARSVFDSTPNPSR 94
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
+ WNS++ + + + + ++ +V + + +F V+ + +L+ G HG
Sbjct: 95 ILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGE 154
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
+ + G + ++ + LV+MY + + A ++F + RDVV+WN +I L++SE+ +A
Sbjct: 155 IDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEA 214
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
++ + M + V P+ + + + L N L +SIH V + V G L+D
Sbjct: 215 VDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG--LIDL 272
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTF 345
Y+KC +++ A F ++ +++ VSW ++ GYA + L + ++LG R N+
Sbjct: 273 YSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKV-- 330
Query: 346 SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
S+++ L + + G E + L I +
Sbjct: 331 -----SAVSAFLAAAETIDLEKGKEIHGCALQQ---------------------RIDSDI 364
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+ A + +Y + G+ + +L L+ D+V+W+ +IAA G +E L LF+ M+
Sbjct: 365 LVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQ 424
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
++ P+ T +S+L AC+ L L LG S+H K + + SD L+ MY KCG +
Sbjct: 425 KMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD-MDSDLSTGTALVSMYAKCGFFTA 483
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
++ FN M+ R+++TW +LI+ G A++ F ++ PD ++ V+ AC
Sbjct: 484 ALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACAL 543
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
+ +G + + + G E + + ++D+ + G L AE + F + + W
Sbjct: 544 LNDLDQGTCIHGLIVK-LGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWN 602
Query: 646 TFL 648
+
Sbjct: 603 VII 605
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 230/477 (48%), Gaps = 41/477 (8%)
Query: 138 ALTESSFVGVIHG---LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
+L+ S++ +H LS+ + L QIH +I +GF + + + L+N+Y
Sbjct: 23 SLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDL 81
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A +F + WN++I A S+ + +ALE+Y M + P++ TF +V+ +C G
Sbjct: 82 ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
N G H ++ + LE DVF+G+ LVD Y+K +L+ A F ++ +++V+WNA+
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAM 201
Query: 315 ILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE 373
I G + P +QL G P+ + ++ ++L C I +
Sbjct: 202 IAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIEL-CRSI------HG 254
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
YV +S +GLI +Y++ G + ++ Q+
Sbjct: 255 YVFRRDFSSAVSNGLID-----------------------LYSKCGDVDVARRVFDQMVD 291
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
D VSW ++A AHNG + EVLELF M+ + + + VS A ++ +L G +
Sbjct: 292 QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEI 351
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
HG + I SD V L+ MY KCG + ++F + R+++ W+A+I+AL G+
Sbjct: 352 HGCALQQR-IDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGY 410
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
+ AL F+EM+ KP+RV L+++L AC L++ G + + V+ +MD
Sbjct: 411 PEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSI-----HCFTVKADMD 462
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 203/614 (33%), Positives = 329/614 (53%), Gaps = 43/614 (7%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L +C SL G + AS+LK G F + G ++L Y + G LD + VF+ M +
Sbjct: 57 LKACSSLPVRHGKSIHASLLKQG-FDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDS 115
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
V+WN ++ G + ++ F + S+ V IH + +E G ++HG
Sbjct: 116 VSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGY 175
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
+I++GF V NSL++MY + AE++F ++ RDV+SW+ +IG ++ A
Sbjct: 176 IIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMA 234
Query: 227 LELYLRMSVDIVFP-NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
L+L+L M+ + + T V V+ +CA + +G+S+H VI L+ D+FVG++++D
Sbjct: 235 LQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIID 294
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFT 344
Y+KCD+ E A F+E+ +N VSWN++I G ++ ++ L + + G+R +E T
Sbjct: 295 MYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVT 354
Query: 345 FSHVLRSSL----AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
++L+S FQ +H ++IR GYE E+V+ SL+ +Y+K LI LA+
Sbjct: 355 LVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIE--LAW----- 407
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
KL +L+ D VSW+ +IA H G E + LF+
Sbjct: 408 -------------------------KLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQ 442
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M A+ P+ T +SLL A S +L HG+ + ++++ V ++DMY KC
Sbjct: 443 EMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRG-LAAEVAVGTAILDMYAKC 501
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
G IG S K F+++ ++N+++W A+I+A G+NG A+ AL EM+ G KP+ V ++VL
Sbjct: 502 GEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVL 561
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP--FP 638
+AC HGGLV EG+ FE M + +GVEP ++HY C+VD+L R G L A +I MP
Sbjct: 562 SACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMR 621
Query: 639 PNALIWRTFLEGCQ 652
A +W L C+
Sbjct: 622 DGAGLWGALLSACR 635
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 156/578 (26%), Positives = 271/578 (46%), Gaps = 46/578 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
M R+ VS+N +I + G + L F FEP T + +C SL +E G
Sbjct: 110 MRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEG 169
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ ++++G F V +LL +Y + ++ +F++M + +++W+ ++ + +
Sbjct: 170 LKMHGYIIRSG-FLDIPSVQNSLLSMYADND-MERAEELFDEMCERDVISWSVMIGGYVQ 227
Query: 119 HGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + + LF E+ + + L + V V+ +N D+ G +HG+VI G DY+L
Sbjct: 228 TGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLF 287
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V NS+++MY +C SA K F ++ R+ VSWN+II L +E +AL L+ M
Sbjct: 288 VGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAG 347
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
++ T V ++ SC + K IH+ VI+ E + FV ++L+D Y+KCD +E A
Sbjct: 348 FRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAW 407
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS-SLAF 355
F + K+ VSW+A+I G+ P +I L E+ Q +PN T +L + S++
Sbjct: 408 KLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSA 467
Query: 356 QLLQ---LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L + H + IR G + V I
Sbjct: 468 DLKRSKWAHGIAIRRG--------------------------------LAAEVAVGTAIL 495
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G+ + K Q+ +IVSW +IAAC NG ++ L L M+ + P+
Sbjct: 496 DMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVV 555
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T +S+LSACS + G S + + + + ++DM + G + S++ + +
Sbjct: 556 TTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEK 615
Query: 533 MTDR---NVITWTALISALGLNGFAQ-RALEKFREMEF 566
M +R W AL+SA +G ++ A FR +E
Sbjct: 616 MPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLEL 653
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 122/537 (22%), Positives = 222/537 (41%), Gaps = 58/537 (10%)
Query: 129 FCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
+ ++ ++ LT+ + V I + + G+ IH ++K GFD NS+++ Y +
Sbjct: 37 YHQMKKAGAQLTDPTLVHSILKACSSLPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMK 96
Query: 189 CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYV 248
+ SA +F + RD VSWN +I K L + + V PN +T V
Sbjct: 97 TGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLA 156
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
I++C L G +H +I++ V ++L+ YA D +E A F E+ +++
Sbjct: 157 IHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEELFDEMCERDV 215
Query: 309 VSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMG 368
+SW+ +I GY +Q G + +A QL +
Sbjct: 216 ISWSVMIGGY---------------VQTG------------EAKMALQLFLE--MTSNAS 246
Query: 369 YENYEYVLGSLMTSYAKSGLIS---DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
E + S++ + A +G IS V + + N I +Y++ +
Sbjct: 247 IELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAF 306
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
K +++ + VSWN +I+ + E L LF M A D T V+LL +C
Sbjct: 307 KAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFV 366
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
+ +H ++ + + FV N LID Y KC I + K+F+ + ++ ++W+A+I
Sbjct: 367 DPFQCKFIHSIVIRWG-YELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMI 425
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA-----------CRHGGLVREGME 594
+ G A+ F+EM KP+ V ++++L A HG +R G+
Sbjct: 426 AGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGL- 484
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
E+ ++D+ + G + + K +P N + W + C
Sbjct: 485 -----------AAEVAVGTAILDMYAKCGEIGLSRKAFDQIP-EKNIVSWGAMIAAC 529
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 5/172 (2%)
Query: 434 PDIVSWNIVIAACAHNG--DYKEVLELFKYMRAARIYPDNYTFV-SLLSACSKLCNLALG 490
P + +WN+ I + D E + M+ A + T V S+L ACS L + G
Sbjct: 10 PKLPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSL-PVRHG 68
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
S+H + K + S T N ++D Y K G++ S++ +F+ M R+ ++W +I
Sbjct: 69 KSIHASLLK-QGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLS 127
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
G + + L FR+ + F+P+ L+ + ACR G + EG+++ + RS
Sbjct: 128 RGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRS 179
>gi|449484874|ref|XP_004157004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Cucumis sativus]
Length = 881
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 197/667 (29%), Positives = 359/667 (53%), Gaps = 21/667 (3%)
Query: 4 RNVVSFNSIISAYSRCG-YVEDALRMFLYMINRG-FEPTQFTFGGLLS-CDSLNP-VEGA 59
R+VV++N I+S Y R + A+R+F+ M G +P+ T +L C + V G
Sbjct: 107 RDVVTWNIILSGYCRSQIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGK 166
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHG-CLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + V+K+GL D VG AL+ +Y + G + + F + K +VTWN+I+S +
Sbjct: 167 SIHSFVMKSGLD-RDTLVGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAE 225
Query: 119 HGFVEDCMFLFCELVRSEVA---LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDY 174
+ D + LF ++ + +T + + V N FG++IHG + +
Sbjct: 226 KNLMFDALQLFSLMLEEPIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIE 285
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ V N+L+N+Y + + AE +F ++ RD+VSWNT+I + ++ + +A++ + ++
Sbjct: 286 DISVCNALMNLYLRVGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLL 345
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNL 293
P+ T + V+ +CA QN +GK IH ++++ L D VG+ALV FY KC+++
Sbjct: 346 CLGSDPDSVTLISVLPACAYSQNLRIGKMIHGYILRHPILSEDSTVGNALVSFYTKCNDV 405
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL-LQLGYRPNEFTFSHVLRSS 352
+ A FS IS+K+++SWN+++ +A + T L+ L L+ ++P+ FT ++
Sbjct: 406 KSAFHSFSLISSKDLISWNSVLNAFAEFGNTTQFLRLLHLMLRERFKPDHFTILSIINFC 465
Query: 353 LAF----QLLQLHCLIIRMGYENYEY---VLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+ ++ ++HC +R +Y +L +L+ +Y+K G+I AL + + R +
Sbjct: 466 ITVLGGCKVKEVHCYSVRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNL 525
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
V N + Y N+ + + S + D+ +WN++I A N ++ L LF+ ++
Sbjct: 526 VTCNSMISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQIK 585
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ PD + +SLL C++L + L HG ++ D ++ L+D Y KCG++
Sbjct: 586 GMKPDAVSIMSLLPVCNELASFRLLKECHGYSFRSRF--EDVYLDGALLDAYAKCGAVDC 643
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ K+F + ++++ +T++IS ++G + AL+ F M G KPD V + ++L+AC H
Sbjct: 644 AYKLFESSSQKDLVMFTSMISGYAIHGMGEEALKVFTNMLESGVKPDHVVVTSILSACSH 703
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GLV +G+ +F M ++P M+HY CVVDLL R G +K+A + MP P+A IW
Sbjct: 704 TGLVDQGLNIFHSMEEVIHIKPTMEHYACVVDLLARGGRIKDAYSFVIGMPIQPDANIWG 763
Query: 646 TFLEGCQ 652
T L C+
Sbjct: 764 TLLGACK 770
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 162/608 (26%), Positives = 270/608 (44%), Gaps = 76/608 (12%)
Query: 23 EDALRMFL--YMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNG-LFCADAFV 77
++ L +F+ + + GF+P F + SC +L + G LQ +K G + C +
Sbjct: 23 QEVLSVFVHKFQCSSGFKPDNHIFAAIFKSCAALFAINVGKALQGYAVKQGEIVCQSVYK 82
Query: 78 GTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE-DCMFLFCEL-VRS 135
G LL LY R G DE +FE + R+ +VTWN I+S + + + + LF ++
Sbjct: 83 G--LLNLYARCGAFDECWKLFEQLNRRDVVTWNIILSGYCRSQIHDTKAIRLFVKMHAEG 140
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW-S 194
EV + + ++ S G+ IH V+K+G D + LV N+L++MY + W
Sbjct: 141 EVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVGNALISMYAKSGQPWYD 200
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A F + +DVV+WNTII ALAE AL+L+ M + + PN T ++ CA
Sbjct: 201 AYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPIEPNYITIACILPVCAS 260
Query: 255 LQNSI---LGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
N++ GK IH + + L D+ V +AL++ Y + +E A + FS + +++VS
Sbjct: 261 FGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQMEEAEILFSHLKQRDLVS 320
Query: 311 WNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGY 369
WN LI GY+ + ++ +LL LG P+ T VL + Q L R+G
Sbjct: 321 WNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNL-------RIGK 373
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
+ Y+L + S + N + Y + S
Sbjct: 374 MIHGYILRHPILSEDST--------------------VGNALVSFYTKCNDVKSAFHSFS 413
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
+ D++SWN V+ A A G+ + L L M R PD++T +S+++ C +
Sbjct: 414 LISSKDLISWNSVLNAFAEFGNTTQFLRLLHLMLRERFKPDHFTILSIINFCITVLGGCK 473
Query: 490 GSSLHGLIKKTEIISSD--TFVCNMLIDMYGKCGSIGSSVKIFNE--------------- 532
+H + + +D + N L+D Y KCG I ++KIF
Sbjct: 474 VKEVHCYSVRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMIS 533
Query: 533 -----------------MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
M++ ++ TW +I N + AL FR ++ G KPD V+
Sbjct: 534 CYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQIKGMKPDAVS 593
Query: 576 LIAVLTAC 583
++++L C
Sbjct: 594 IMSLLPVC 601
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 184/398 (46%), Gaps = 41/398 (10%)
Query: 206 DVVSWNTIIGALAESENFGKALELYL-RMSVDIVF-PNQTTFVYVINSCAGLQNSILGKS 263
D SW++ I L + + L +++ + F P+ F + SCA L +GK+
Sbjct: 5 DFTSWSSTIRNLCLNAKHQEVLSVFVHKFQCSSGFKPDNHIFAAIFKSCAALFAINVGKA 64
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS- 322
+ +K V L++ YA+C + F +++ +++V+WN ++ GY
Sbjct: 65 LQGYAVKQGEIVCQSVYKGLLNLYARCGAFDECWKLFEQLNRRDVVTWNIILSGYCRSQI 124
Query: 323 -SPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM 380
+I L +++ G +P+ T + +L + R+G + V+G +
Sbjct: 125 HDTKAIRLFVKMHAEGEVKPSAITIASILP------------VCSRVG----KGVVGKSI 168
Query: 381 TSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ-YNETVKLLSQLERPDIVS 438
S+ KSGL D L N + +Y ++GQ + + + + D+V+
Sbjct: 169 HSFVMKSGLDRDTLV-------------GNALISMYAKSGQPWYDAYAAFNSIIHKDVVT 215
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN---LALGSSLHG 495
WN +I+A A + L+LF M I P+ T +L C+ N G +HG
Sbjct: 216 WNTIISALAEKNLMFDALQLFSLMLEEPIEPNYITIACILPVCASFGNNVSCRFGKEIHG 275
Query: 496 LI-KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
I ++TE+I D VCN L+++Y + G + + +F+ + R++++W LIS LN
Sbjct: 276 YIHRRTELI-EDISVCNALMNLYLRVGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKW 334
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
A++ F ++ LG PD V LI+VL AC + +R G
Sbjct: 335 LEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNLRIG 372
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 196/448 (43%), Gaps = 52/448 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCD-SLNPVEG 58
+ R++VS+N++IS YS +A+ F ++ G +P T +L +C S N G
Sbjct: 313 LKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNLRIG 372
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +L++ + D+ VG AL+ Y + + F + K L++WNS+++ F +
Sbjct: 373 KMIHGYILRHPILSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLISWNSVLNAFAE 432
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIH------GLSNEQDLE-------FGEQIHG 165
G + L ++R + + +I+ G +++ E +G
Sbjct: 433 FGNTTQFLRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSVRACLFEADYG 492
Query: 166 LVIKNGF----------DY------------ELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
I N DY L+ NS+++ Y C A +F +
Sbjct: 493 PTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPNDALTIFSGMS 552
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
D+ +WN +I AE+ AL L+ R+ + + P+ + + ++ C L + L K
Sbjct: 553 ETDLTTWNLMIRVYAENNCPRDALGLFRRLQIKGMKPDAVSIMSLLPVCNELASFRLLKE 612
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS- 322
H ++ E DV++ AL+D YAKC ++ A+ F S K++V + ++I GYA
Sbjct: 613 CHGYSFRSRFE-DVYLDGALLDAYAKCGAVDCAYKLFESSSQKDLVMFTSMISGYAIHGM 671
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLLQL-----HCLIIRMGYENYE 373
++ + +L+ G +P+ + +L + L Q L + + I+ E+Y
Sbjct: 672 GEEALKVFTNMLESGVKPDHVVVTSILSACSHTGLVDQGLNIFHSMEEVIHIKPTMEHYA 731
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNI 401
V+ L A+ G I DA +FV + I
Sbjct: 732 CVVDLL----ARGGRIKDAYSFVIGMPI 755
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 208/673 (30%), Positives = 349/673 (51%), Gaps = 55/673 (8%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMI--NRGFE--PTQFTFGGLLSCDSLNPVE 57
P R+++++N+++S Y++ G +F M + G E PT+ TFG L++ L+
Sbjct: 234 PVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCS 293
Query: 58 GA---QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
QL VLK+G +D +VG+AL+ + RHG LDE ++ + ++ VT N +++
Sbjct: 294 LGLLDQLFVRVLKSGC-SSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIA 352
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN----EQDLEFGEQIHGLVIKN 170
K E +F R A+ ++V ++ ++ EQ L G ++H V++
Sbjct: 353 GLVKQQHGEAAAEIFMG-ARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRA 411
Query: 171 GFDY-ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
G Y ++ V+N LVNMY +C I A ++F+ +E RD +SWNTII AL ++ A+
Sbjct: 412 GHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMN 471
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
Y M + + P+ + ++SCAGL G+ +H +K L D V +ALV Y +
Sbjct: 472 YCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGE 531
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP--TSIFLLIELLQLGYRPNEFTFSH 347
C + F+ +S ++VSWN+++ AS +P S+ + +++ G PN+ TF +
Sbjct: 532 CGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVN 591
Query: 348 VLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
L + +L Q+H ++++ G V +LM+ YAKSG +
Sbjct: 592 FLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDV-------------- 637
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
+ +L S++ R D +SWN +I+ +NG +E ++ M
Sbjct: 638 ------------------DSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLM 679
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ D+ TF +L+AC+ + L G +H ++ + SD V + L+DMY KCG
Sbjct: 680 MHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHL-ESDVVVESALVDMYSKCGR 738
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
I + K+F+ M+ +N +W ++IS +G ++ALE F EM+ G PD V ++VL+A
Sbjct: 739 IDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSA 798
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H GLV G++ FE M YG+ P ++HY CV+DLL R G L + ++ + MP PN L
Sbjct: 799 CSHAGLVERGLDYFELME-DYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTL 857
Query: 643 IWRTFLEGCQRCR 655
IWRT L CQ+ +
Sbjct: 858 IWRTVLVACQQSK 870
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 172/680 (25%), Positives = 309/680 (45%), Gaps = 66/680 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR--GFEPTQFTFGGLL-SCDSLNPVE 57
MP RN VS+ +IS + G EDA +F M+ G PT FTFG +L +C P
Sbjct: 126 MPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGP-- 183
Query: 58 GAQLQASVLKNGL-----FCADAFVGTALLGLYGRHGCLDEVVS--VFEDMPRKSLVTWN 110
+L +V +GL F ++ V AL+ +YG +++ VF+ P + L+TWN
Sbjct: 184 -DRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWN 242
Query: 111 SIVSIFGKHGFVEDCMFLFCELVRS----EVALTESSFVGVIHGLS-NEQDLEFGEQIHG 165
+++S++ K G LF + E+ TE +F +I + L +Q+
Sbjct: 243 ALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFV 302
Query: 166 LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
V+K+G +L V ++LV+ + + + A+ ++ ++ R+ V+ N +I L + ++
Sbjct: 303 RVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEA 362
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGL----QNSILGKSIHAKVIKNA-LECDVFVG 280
A E+++ + D N T+V ++++ A Q G+ +HA V++ + + V
Sbjct: 363 AAEIFMG-ARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVS 421
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYR 339
+ LV+ YAKC ++ A F + ++ +SWN +I + + L+ Q
Sbjct: 422 NGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIG 481
Query: 340 PNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
P+ F L S LL QLHC ++ G L
Sbjct: 482 PSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWG------------------------LYL 517
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN-GDYKE 454
T++ +N + +Y G+ +E ++ + + D+VSWN ++ A + E
Sbjct: 518 DTSV--------SNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITE 569
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
+++F M + + P+ TFV+ L+A + L L LG +H ++ K ++ D V N L+
Sbjct: 570 SVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLK-HGVTEDNAVDNALM 628
Query: 515 DMYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
Y K G + S ++F+ M+ R+ I+W ++IS NG Q A++ M D
Sbjct: 629 SCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDH 688
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
VL AC + GME+ RS+ +E ++ +VD+ + G + A K+
Sbjct: 689 CTFSIVLNACASVAALERGMEMHAFGLRSH-LESDVVVESALVDMYSKCGRIDYASKVFH 747
Query: 634 TMPFPPNALIWRTFLEGCQR 653
+M N W + + G R
Sbjct: 748 SMS-QKNEFSWNSMISGYAR 766
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 151/603 (25%), Positives = 270/603 (44%), Gaps = 40/603 (6%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L V+K GL D F+ L+ Y + LD VF+ MP ++ V+W ++S G
Sbjct: 87 LHLEVVKRGL-THDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSG 145
Query: 121 FVEDCMFLFCELVRSEVALTESSFV--GVIHGL--SNEQDLEFGEQIHGLVIKNGFDYEL 176
ED LF ++R +SF V+ S L F Q+HGLV K F
Sbjct: 146 LPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNT 205
Query: 177 LVANSLVNMYFQCA--GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V N+L++MY C+ A+++F +RD+++WN ++ A+ + L+ M
Sbjct: 206 TVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQ 265
Query: 235 VDI----VFPNQTTFVYVINSCAGLQNSILG--KSIHAKVIKNALECDVFVGSALVDFYA 288
D + P + TF +I + L + LG + +V+K+ D++VGSALV +A
Sbjct: 266 YDDSGIELRPTEHTFGSLITATY-LSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFA 324
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
+ L+ A + + +N V+ N LI G + + + + N T+ +
Sbjct: 325 RHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVL 384
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
L + F + +R G E + +VL A +I R + +
Sbjct: 385 LSAIAEFSTAEQG---LRKGREVHAHVL--------------------RAGHIYRKIAVS 421
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N + +Y + G ++ ++ +E D +SWN +I A NG + + + MR I
Sbjct: 422 NGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIG 481
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P N+ +S LS+C+ L LA G LH K + DT V N L+ MYG+CG + +
Sbjct: 482 PSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLY-LDTSVSNALVKMYGECGRMSECWE 540
Query: 529 IFNEMTDRNVITWTALISALGLNGFA-QRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
IFN M+ +V++W +++ + + +++ F M G P++V + L A
Sbjct: 541 IFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLS 600
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
++ G ++ M + +GV + + ++ + G + E++ + M +A+ W +
Sbjct: 601 VLELGKQIHSVMLK-HGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSM 659
Query: 648 LEG 650
+ G
Sbjct: 660 ISG 662
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 199/456 (43%), Gaps = 55/456 (12%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
E +H V+K G ++L +AN LVN Y + A + +A ++F + R+ VSW +I S
Sbjct: 85 ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144
Query: 221 ENFGKALELYLRMSVD--IVFPNQTTFVYVINSCAGLQNSILG--KSIHAKVIKNALECD 276
A L+ M + P TF V+ +C LG +H V K +
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204
Query: 277 VFVGSALVDFYAKCDNLEG--AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
V +AL+ Y C A F +++++WNAL+ YA + F L +
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264
Query: 335 Q-----LGYRPNEFTFSHVLR----SSLAFQLL-QLHCLIIRMGYENYEYVLGSLMTSYA 384
Q + RP E TF ++ SS + LL QL +++ G + YV +L++++A
Sbjct: 265 QYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFA 324
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
+ G++ +A L AV +IAG+ + Q+ E
Sbjct: 325 RHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQ--QHGEAAA------------------ 364
Query: 445 ACAHNGDYKEVLELFKYMR-AARIYPDNYTFVSLLSACSKLCN----LALGSSLHGLIKK 499
E+F R +A + D T+V LLSA ++ L G +H + +
Sbjct: 365 ------------EIFMGARDSAAVNVD--TYVVLLSAIAEFSTAEQGLRKGREVHAHVLR 410
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
I V N L++MY KCG+I + ++F M R+ I+W +I+AL NG+ + A+
Sbjct: 411 AGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMM 470
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+ M P A I+ L++C GL+ G +L
Sbjct: 471 NYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQL 506
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M +N S+NS+IS Y+R G AL +F M G P TF +LS C VE
Sbjct: 749 MSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERG 808
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIV 113
++++ + ++ L GR G LD++ + MP K + + W +++
Sbjct: 809 LDYFELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVL 863
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 210/663 (31%), Positives = 336/663 (50%), Gaps = 48/663 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLL-SCDSLNPVE-GA 59
++++ +N+++S YSR DA+ +FL +++ P FT + +C + VE G
Sbjct: 156 EKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGE 215
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ A LK G F +DAFVG AL+ +YG+ G ++ V VFE M ++LV+WNS++ ++
Sbjct: 216 AVHALALKAGGF-SDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSEN 274
Query: 120 GFVEDCMFLFCELVRSE---VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G +C +F L+ SE + ++ V VI + ++ G +HGL K G E+
Sbjct: 275 GGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEV 334
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V NSLV+MY +C + A +F ++VVSWNTII ++ +F EL M +
Sbjct: 335 TVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQRE 394
Query: 237 -IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V N+ T + V+ +C+G + K IH ++ D V +A V YAKC +L+
Sbjct: 395 EKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDC 454
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F + K + SWNALI +A P S+ L + ++ G P+ FT +L +
Sbjct: 455 AERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACAR 514
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAK-SGLISDALAFVTALNIPRAVVPAN 409
+ L ++H ++R G E E++ SLM+ Y + S ++ L F
Sbjct: 515 LKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIF-------------- 560
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
++E +V WN++I + N E L+ F+ M + I P
Sbjct: 561 -------------------DKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKP 601
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+L ACS++ L LG +H K + S D FV LIDMY KCG + S I
Sbjct: 602 QEIAVTGVLGACSQVSALRLGKEVHSFALKAHL-SEDAFVTCALIDMYAKCGCMEQSQNI 660
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F+ + +++ W +I+ G++G +A+E F M+ G +PD + VL AC H GLV
Sbjct: 661 FDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLV 720
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG++ +M YGV+P+++HY CVVD+L R G L EA K++ MP P++ IW + L
Sbjct: 721 TEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLS 780
Query: 650 GCQ 652
C+
Sbjct: 781 SCR 783
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 178/655 (27%), Positives = 320/655 (48%), Gaps = 60/655 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI---NRGFEPTQFTFGGLL-SCDSLNPV 56
M +RN+VS+NS++ A S G + +F ++ G P T ++ +C ++ V
Sbjct: 256 MRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEV 315
Query: 57 E-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G + K G+ + V +L+ +Y + G L E ++F+ K++V+WN+I+
Sbjct: 316 RMGMVVHGLAFKLGI-TEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWG 374
Query: 116 FGKHGFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ K G L E+ R E V + E + + V+ S E L ++IHG ++GF
Sbjct: 375 YSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLK 434
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ LVAN+ V Y +C+ + AE++F +E + V SWN +IGA A++ GK+L+L+L M
Sbjct: 435 DELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMM 494
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ P++ T ++ +CA L+ GK IH +++N LE D F+G +L+ Y +C ++
Sbjct: 495 DSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSML 554
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
L F ++ NK++V WN +I G++ P ++ ++L G +P E + VL +
Sbjct: 555 LGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACS 614
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L R+G E + + L K+ L D AFVT I
Sbjct: 615 QVSAL-------RLGKEVHSFAL--------KAHLSED--AFVTCALID----------- 646
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y + G ++ + ++ D WN++IA +G + +ELF+ M+ PD++T
Sbjct: 647 MYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFT 706
Query: 474 FVSLLSACSK-------LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
F+ +L AC+ L L +L+G+ K E + C ++DM G+ G + +
Sbjct: 707 FLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLE-----HYAC--VVDMLGRAGQLTEA 759
Query: 527 VKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+K+ NEM D + W++L+S+ G + E +++ L +P++ +L+
Sbjct: 760 LKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKL--LELEPNKAENYVLLSNLYA 817
Query: 586 G-GLVREGMELFERMNRSYGVEPE-----MDHYHCVVDLLVRYGHLKEAEKIITT 634
G G E ++ +RM + G+ + ++ V LV G L E++KI T
Sbjct: 818 GLGKWDEVRKVRQRM-KENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQT 871
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 160/344 (46%), Gaps = 38/344 (11%)
Query: 248 VINSCAGLQNSILGKSIHAKV-IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
++ +C +N +G+ +HA V + L DV + + ++ Y+ C + + F K
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157
Query: 307 NIVSWNALILGYASKSS-PTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
++ +NAL+ GY+ + +I L +ELL P+ FT V ++
Sbjct: 158 DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKAC------------ 205
Query: 365 IRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
G + E LG + + A K+G SDA N + +Y + G
Sbjct: 206 --AGVADVE--LGEAVHALALKAGGFSDAFV-------------GNALIAMYGKCGFVES 248
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR---IYPDNYTFVSLLSA 480
VK+ + ++VSWN V+ AC+ NG + E +FK + + + PD T V+++ A
Sbjct: 249 AVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPA 308
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C+ + + +G +HGL K I+ + V N L+DMY KCG +G + +F+ +NV++
Sbjct: 309 CAAVGEVRMGMVVHGLAFKLG-ITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVS 367
Query: 541 WTALISALGLNGFAQRALEKFREMEF-LGFKPDRVALIAVLTAC 583
W +I G + E +EM+ + + V ++ VL AC
Sbjct: 368 WNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPAC 411
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 200/624 (32%), Positives = 320/624 (51%), Gaps = 43/624 (6%)
Query: 37 FEPTQFTFGGLLSCD-SLNPVEGAQL-QASVLKNGLFCADAFVGTALLGLYGRHGCLDEV 94
P + F LL S NP+ ++ ++ +GL +D F+ L+ + + +D
Sbjct: 45 LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGL-QSDTFLANILINVCSKSDRVDNA 103
Query: 95 VSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSN 153
VF+ MP K+L+TW+S+VS++ + G+ E+ + +F +L R S E VI +
Sbjct: 104 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 163
Query: 154 EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTI 213
+E G Q+HG V+++GFD ++ V SL++ Y + I A +F + + V+W TI
Sbjct: 164 LGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTI 223
Query: 214 IGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
I + +LEL+ +M V P++ V+++C+ L+ GK IHA V++
Sbjct: 224 IAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGT 283
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIE 332
E DV V + L+DFY KC+ ++ F ++ KNI+SW +I GY S ++ L E
Sbjct: 284 EMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGE 343
Query: 333 LLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
+ +LG++P+ F + VL S + + L Q+H I+ E+ E+V L+ YAKS L
Sbjct: 344 MNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNL 403
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
+ DA K+ + +++S+N +I +
Sbjct: 404 LIDAK--------------------------------KVFDVMAEQNVISYNAMIEGYSS 431
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
E LELF MR P+ +TF +L++A S L +L G H + K + F
Sbjct: 432 QEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGL-DFCPF 490
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V N L+DMY KCGSI + K+FN R+V+ W ++IS +G A+ AL FREM G
Sbjct: 491 VTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEG 550
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
+P+ V +AVL+AC H G V +G+ F M +G++P +HY CVV LL R G L EA
Sbjct: 551 IQPNYVTFVAVLSACSHAGRVEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGKLFEA 609
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
++ I MP P A++WR+ L C+
Sbjct: 610 KEFIEKMPIEPAAIVWRSLLSACR 633
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 157/565 (27%), Positives = 290/565 (51%), Gaps = 51/565 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLL-SCDSLNPVE- 57
MP +N+++++S++S YS+ GY E+AL +F+ + + G P +F ++ +C L VE
Sbjct: 110 MPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEK 169
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
GAQL V+++G F D +VGT+L+ Y ++G ++E VF+ + K+ VTW +I++ +
Sbjct: 170 GAQLHGFVVRSG-FDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYT 228
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
K G + LF ++ + V V+ S + LE G+QIH V++ G + ++
Sbjct: 229 KCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVS 288
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N L++ Y +C + + K+F + +++++SW T+I ++ +A++L+ M+
Sbjct: 289 VVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLG 348
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P+ V+ SC + G+ +HA IK LE D FV + L+D YAK + L A
Sbjct: 349 WKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAK 408
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQ 356
F ++ +N++S+NA+I GY+S+ + L +++ +PNEFTF+ ++ ++
Sbjct: 409 KVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLA 468
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L Q H +++MG + +V +L+ YAK G I +A
Sbjct: 469 SLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEAR------------------- 509
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K+ + D+V WN +I+ A +G+ +E L +F+ M I P+
Sbjct: 510 -------------KMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYV 556
Query: 473 TFVSLLSACSKLCNLALG----SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
TFV++LSACS + G +S+ G K ++ + C ++ + G+ G + + +
Sbjct: 557 TFVAVLSACSHAGRVEDGLNHFNSMPGFGIKP---GTEHYAC--VVSLLGRSGKLFEAKE 611
Query: 529 IFNEMT-DRNVITWTALISALGLNG 552
+M + I W +L+SA + G
Sbjct: 612 FIEKMPIEPAAIVWRSLLSACRIAG 636
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQA 63
R+VV +NS+IS +++ G E+AL MF M+ G +P TF +LS S A
Sbjct: 518 RDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACS---------HA 568
Query: 64 SVLKNGLFCADAFVG----------TALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSI 112
+++GL ++ G ++ L GR G L E E MP + + W S+
Sbjct: 569 GRVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSL 628
Query: 113 VSIFGKHGFVE 123
+S G VE
Sbjct: 629 LSACRIAGNVE 639
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 201/658 (30%), Positives = 337/658 (51%), Gaps = 39/658 (5%)
Query: 1 MPDRNV-VSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSL-NPVE 57
+P R+ V N ++ Y+R G V + L F G T +L +C S+ + V
Sbjct: 58 IPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVL 117
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G QL +K G + GT+L+ +Y + G + E + VFE MP+K++VTW S+++
Sbjct: 118 GEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCA 177
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ M LF + + +F V+ ++++ L+ G+++H +K G +
Sbjct: 178 HAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVF 237
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V NSL+NMY +C + A+ +F +E RD+VSWNT++ L +E +AL+L+ +
Sbjct: 238 VCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATM 297
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
Q+T+ VI CA L+ L + +H+ V+K+ V +AL D Y+KC L A
Sbjct: 298 GKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADAL 357
Query: 298 LCFSEIS-NKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
FS + ++N+VSW A+I G P ++ L + + PNEFT+S +L++SL+
Sbjct: 358 NIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI 417
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
Q+H +I+ Y++ +V +L+ SY+K G DAL+
Sbjct: 418 LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALS--------------------- 456
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ +E+ D+V+W+ +++ A GD + LF M I P+ +T
Sbjct: 457 -----------IFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTIS 505
Query: 476 SLLSACS-KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S++ AC+ + G H + K + V + L+ MY + G+I S+ +F T
Sbjct: 506 SVIDACACPSAGVDQGRQFHAISIKYRYHDA-ICVSSALVSMYSRKGNIDSAQIVFERQT 564
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
DR++++W ++IS +G++ +A+E FR+ME G + D V +AV+ C H GLV EG +
Sbjct: 565 DRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQ 624
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+ M R + + P M+HY C+VDL R G L E +I MPFP A++WRT L C+
Sbjct: 625 YFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACR 682
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 237/493 (48%), Gaps = 43/493 (8%)
Query: 98 FEDMPRK-SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+++PR+ + V N ++ + + G V + + F R V + ++ V+ + D
Sbjct: 55 LDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114
Query: 157 LEFGEQIHGLVIKNGFDY-ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
GEQ+H L +K G D E+ SLV+MY +C + ++F+ + ++VV+W +++
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
A ++ + + L+ RM + ++PN TF V+++ A LG+ +HA+ +K
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS 234
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELL 334
VFV ++L++ YAKC +E A F+ + +++VSWN L+ G ++ ++ L E
Sbjct: 235 SVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESR 294
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
+ + T++ V++ + L QLH +++ G+ V+ +L +Y+K G ++
Sbjct: 295 ATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELA 354
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
DAL NI + TG N +VSW +I+ C NG
Sbjct: 355 DAL---------------NIFSMT---TGSRN-------------VVSWTAIISGCIQNG 383
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
D + LF MR R+ P+ +T+ ++L A + L +H + KT FV
Sbjct: 384 DIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTN-YQHIPFVG 438
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
L+ Y K GS ++ IF + ++V+ W+A++S G + A F +M G K
Sbjct: 439 TALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIK 498
Query: 571 PDRVALIAVLTAC 583
P+ + +V+ AC
Sbjct: 499 PNEFTISSVIDAC 511
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 113/225 (50%), Gaps = 8/225 (3%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL---SCDSLNPVEGAQ 60
++VV++++++S +++ G E A +F M +G +P +FT ++ +C S +G Q
Sbjct: 464 KDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQ 523
Query: 61 LQASVLKNGLFCADAF-VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
A +K DA V +AL+ +Y R G +D VFE + LV+WNS++S + +H
Sbjct: 524 FHAISIKYRYH--DAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQH 581
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ-IHGLVIKNGFDYELLV 178
G+ + F ++ S + + +F+ VI G ++ + G+Q +V + + +
Sbjct: 582 GYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEH 641
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEI-RDVVSWNTIIGALAESEN 222
+V++Y + + + +D+ + W T++GA +N
Sbjct: 642 YACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKN 686
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 3/226 (1%)
Query: 428 LSQLERPDI-VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
L ++ R D V N V+ A G EVL+ F R + D+ T +L AC + +
Sbjct: 55 LDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
LG LH L K + L+DMY KCGS+ +++F M +NV+TWT+L++
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
+ F M G P+ +VL+A G + G + + + +G
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQ-SVKFGCR 233
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ + ++++ + G +++A+ + M + + W T + G Q
Sbjct: 234 SSVFVCNSLMNMYAKCGLVEDAKSVFNWME-TRDMVSWNTLMAGLQ 278
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 196/656 (29%), Positives = 340/656 (51%), Gaps = 36/656 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCD-SLNPVEGA 59
M +RNV+S+ +I + G ++A FL M GF P +T+ +L+ + S +E
Sbjct: 91 MVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWV 150
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ S N D VG AL+ +Y + G +D+ VF+ M + + +W ++ +H
Sbjct: 151 KEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQH 210
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHG--LSNEQDLEFGEQIHGLVIKNGFDYELL 177
G ++ LF ++ R ++++ +++ +++ LE+ +++H K GF +L
Sbjct: 211 GRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLR 270
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+L++MY +C I A +F + RDV+SWN +IG LA++ +A ++L+M +
Sbjct: 271 VGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEG 330
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P+ TT++ ++N+ K +H ++ L D+ VGSA V Y +C +++ A
Sbjct: 331 FVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQ 390
Query: 298 LCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
L F +++ +N+ +WNA+I G A K ++ L +++ + G+ P+ TF ++L +++
Sbjct: 391 LIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANV--- 447
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIY 415
G E E+V + SYA +GL+ L + A+V +Y
Sbjct: 448 -----------GEEALEWV--KEVHSYAIDAGLVD--------LRVGNALVH------MY 480
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G ++ + ++ +W ++I+ A +G E LF M I PD T+V
Sbjct: 481 AKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYV 540
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+LSAC+ L +H ++S D V N L+ MY KCGS+ + ++F++M +
Sbjct: 541 SILSACASTGALEWVKEVHSHAVNAGLVS-DLRVGNALVHMYAKCGSVDDARRVFDDMLE 599
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
R+V +WT +I L +G AL+ F +M+ GFKP+ + +AVL+AC H GLV EG
Sbjct: 600 RDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQ 659
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
F + + YG+EP M+HY C+VDLL R G L+EA+ I MP P W L C
Sbjct: 660 FLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGAC 715
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 166/629 (26%), Positives = 306/629 (48%), Gaps = 37/629 (5%)
Query: 12 IISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNG 69
+I Y+ GY EDA++++ M G +P + T+ +L C ++ G ++ A ++++G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
F +D V TAL+ +Y + G +D+ +F+ M +++++W ++ +G ++ F
Sbjct: 61 -FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
++ R ++V +++ ++ LE+ +++H + G +L V N+LV+MY +
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
I A +F + RD+ SW +IG LA+ +A L+L+M PN TT++ ++
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239
Query: 250 NSCAGLQNSILG--KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
N+ A L K +H K D+ VG+AL+ YAKC +++ A L F + +++
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRD 299
Query: 308 IVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIR 366
++SWNA+I G A F + +++ Q G+ P+ T+ LL H +
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTY---------LSLLNTH---VS 347
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
G +E+V + + GL+SD L + A V +Y R G ++
Sbjct: 348 TG--AWEWV-KEVHKHAVEVGLVSD-------LRVGSAFVH------MYIRCGSIDDAQL 391
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+ +L ++ +WN +I A +E L LF MR +PD TFV++LSA
Sbjct: 392 IFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEA 451
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L +H ++ D V N L+ MY KCG+ + ++F++M +RNV TWT +IS
Sbjct: 452 LEWVKEVHSYAIDAGLV--DLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMIS 509
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
L +G A F +M G PD +++L+AC G + E+ + G+
Sbjct: 510 GLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNA-GLV 568
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
++ + +V + + G + +A ++ M
Sbjct: 569 SDLRVGNALVHMYAKCGSVDDARRVFDDM 597
>gi|449469206|ref|XP_004152312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Cucumis sativus]
Length = 873
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 197/667 (29%), Positives = 359/667 (53%), Gaps = 21/667 (3%)
Query: 4 RNVVSFNSIISAYSRCG-YVEDALRMFLYMINRG-FEPTQFTFGGLLS-CDSLNP-VEGA 59
R+VV++N I+S Y R + A+R+F+ M G +P+ T +L C + V G
Sbjct: 107 RDVVTWNIILSGYCRSQIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGK 166
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHG-CLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + V+K+GL D VG AL+ +Y + G + + F + K +VTWN+I+S +
Sbjct: 167 SIHSFVMKSGLD-RDTLVGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAE 225
Query: 119 HGFVEDCMFLFCELVRSEVA---LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDY 174
+ D + LF ++ + +T + + V N FG++IHG + +
Sbjct: 226 KNLMFDALQLFSLMLEEPIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIE 285
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ V N+L+N+Y + + AE +F ++ RD+VSWNT+I + ++ + +A++ + ++
Sbjct: 286 DISVCNALMNLYLRVGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLL 345
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNL 293
P+ T + V+ +CA QN +GK IH ++++ L D VG+ALV FY KC+++
Sbjct: 346 CLGSDPDSVTLISVLPACAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDV 405
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL-LQLGYRPNEFTFSHVLRSS 352
+ A FS IS+K+++SWN+++ +A + T L+ L L+ ++P+ FT ++
Sbjct: 406 KSAFHSFSLISSKDLISWNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFC 465
Query: 353 LAF----QLLQLHCLIIRMGYENYEY---VLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+ ++ ++HC +R +Y +L +L+ +Y+K G+I AL + + R +
Sbjct: 466 ITVLGGCKVKEVHCYSVRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNL 525
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
V N + Y N+ + + S + D+ +WN++I A N ++ L LF+ ++
Sbjct: 526 VTCNSMISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQIK 585
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ PD + +SLL C++L + L HG ++ D ++ L+D Y KCG++
Sbjct: 586 GMKPDAVSIMSLLPVCNELASFRLLKECHGYSFRSRF--EDVYLDGALLDAYAKCGAVDC 643
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ K+F + ++++ +T++IS ++G + AL+ F M G KPD V + ++L+AC H
Sbjct: 644 AYKLFESSSQKDLVMFTSMISGYAIHGMGEEALKVFTNMLESGVKPDHVVVTSILSACSH 703
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GLV +G+ +F M ++P M+HY CVVDLL R G +K+A + MP P+A IW
Sbjct: 704 TGLVDQGLNIFHSMEEVIHIKPTMEHYACVVDLLARGGRIKDAYSFVIGMPIQPDANIWG 763
Query: 646 TFLEGCQ 652
T L C+
Sbjct: 764 TLLGACK 770
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 160/608 (26%), Positives = 268/608 (44%), Gaps = 76/608 (12%)
Query: 23 EDALRMFL--YMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNG-LFCADAFV 77
++ L +F+ + + GF+P F + SC +L + G LQ +K G + C +
Sbjct: 23 QEVLSVFVHKFQCSSGFKPDNHIFAAIFKSCAALFAINIGKALQGYAVKQGEIACQSVYK 82
Query: 78 GTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE-DCMFLFCEL-VRS 135
G LL LY R G DE +FE + + +VTWN I+S + + + + LF ++
Sbjct: 83 G--LLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRSQIHDTKAIRLFVKMHAEG 140
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW-S 194
EV + + ++ S G+ IH V+K+G D + LV N+L++MY + W
Sbjct: 141 EVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVGNALISMYAKSGQPWYD 200
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A F + +DVV+WNTII ALAE AL+L+ M + + PN T ++ CA
Sbjct: 201 AYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPIEPNYITIACILPVCAS 260
Query: 255 LQNSI---LGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
N++ GK IH + + L D+ V +AL++ Y + +E A + FS + +++VS
Sbjct: 261 FGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQMEEAEILFSHLKQRDLVS 320
Query: 311 WNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGY 369
WN LI GY+ + ++ +LL LG P+ T VL + Q L R+G
Sbjct: 321 WNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNL-------RIGK 373
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
+ Y+L + S + N + Y + S
Sbjct: 374 MIHGYILRHPVLSEDST--------------------VGNALVSFYTKCNDVKSAFHSFS 413
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
+ D++SWN V+ A A G+ + L M R PD++T +S+++ C +
Sbjct: 414 LISSKDLISWNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCK 473
Query: 490 GSSLHGLIKKTEIISSD--TFVCNMLIDMYGKCGSIGSSVKIFNE--------------- 532
+H + + +D + N L+D Y KCG I ++KIF
Sbjct: 474 VKEVHCYSVRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMIS 533
Query: 533 -----------------MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
M++ ++ TW +I N + AL FR ++ G KPD V+
Sbjct: 534 CYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQIKGMKPDAVS 593
Query: 576 LIAVLTAC 583
++++L C
Sbjct: 594 IMSLLPVC 601
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 185/398 (46%), Gaps = 41/398 (10%)
Query: 206 DVVSWNTIIGALAESENFGKALELYL-RMSVDIVF-PNQTTFVYVINSCAGLQNSILGKS 263
D SW++ I L + + L +++ + F P+ F + SCA L +GK+
Sbjct: 5 DFTSWSSTIRNLCLNAKHQEVLSVFVHKFQCSSGFKPDNHIFAAIFKSCAALFAINIGKA 64
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS- 322
+ +K V L++ YA+C + F +++++++V+WN ++ GY
Sbjct: 65 LQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRSQI 124
Query: 323 -SPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM 380
+I L +++ G +P+ T + +L + R+G + V+G +
Sbjct: 125 HDTKAIRLFVKMHAEGEVKPSAITIASILP------------VCSRVG----KGVVGKSI 168
Query: 381 TSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ-YNETVKLLSQLERPDIVS 438
S+ KSGL D L N + +Y ++GQ + + + + D+V+
Sbjct: 169 HSFVMKSGLDRDTLV-------------GNALISMYAKSGQPWYDAYAAFNSIIHKDVVT 215
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN---LALGSSLHG 495
WN +I+A A + L+LF M I P+ T +L C+ N G +HG
Sbjct: 216 WNTIISALAEKNLMFDALQLFSLMLEEPIEPNYITIACILPVCASFGNNVSCRFGKEIHG 275
Query: 496 LI-KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
I ++TE+I D VCN L+++Y + G + + +F+ + R++++W LIS LN
Sbjct: 276 YIHRRTELI-EDISVCNALMNLYLRVGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKW 334
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
A++ F ++ LG PD V LI+VL AC + +R G
Sbjct: 335 LEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNLRIG 372
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 195/448 (43%), Gaps = 52/448 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCD-SLNPVEG 58
+ R++VS+N++IS YS +A+ F ++ G +P T +L +C S N G
Sbjct: 313 LKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNLRIG 372
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +L++ + D+ VG AL+ Y + + F + K L++WNS+++ F +
Sbjct: 373 KMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLISWNSVLNAFAE 432
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIH------GLSNEQDLE-------FGEQIHG 165
G L ++R + + +I+ G +++ E +G
Sbjct: 433 FGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSVRACLFEADYG 492
Query: 166 LVIKNGF----------DY------------ELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
I N DY L+ NS+++ Y C A +F +
Sbjct: 493 PTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPNDALTIFSGMS 552
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
D+ +WN +I AE+ AL L+ R+ + + P+ + + ++ C L + L K
Sbjct: 553 ETDLTTWNLMIRVYAENNCPRDALGLFRRLQIKGMKPDAVSIMSLLPVCNELASFRLLKE 612
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS- 322
H ++ E DV++ AL+D YAKC ++ A+ F S K++V + ++I GYA
Sbjct: 613 CHGYSFRSRFE-DVYLDGALLDAYAKCGAVDCAYKLFESSSQKDLVMFTSMISGYAIHGM 671
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLLQL-----HCLIIRMGYENYE 373
++ + +L+ G +P+ + +L + L Q L + + I+ E+Y
Sbjct: 672 GEEALKVFTNMLESGVKPDHVVVTSILSACSHTGLVDQGLNIFHSMEEVIHIKPTMEHYA 731
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNI 401
V+ L A+ G I DA +FV + I
Sbjct: 732 CVVDLL----ARGGRIKDAYSFVIGMPI 755
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 201/658 (30%), Positives = 336/658 (51%), Gaps = 39/658 (5%)
Query: 1 MPDRNV-VSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSL-NPVE 57
+P R+ V N ++ Y+R G V + L F G T +L +C S+ + V
Sbjct: 58 IPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVL 117
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G QL +K G + GT+L+ +Y + G + E + VFE MP+K++VTW S+++
Sbjct: 118 GEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCA 177
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ M LF + + +F V+ ++++ L+ G+++H +K G +
Sbjct: 178 HAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVF 237
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V NSL+NMY +C + A+ +F +E RD+VSWNT++ L +E +AL+L+ +
Sbjct: 238 VCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATM 297
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
Q+T+ VI CA L+ L + +H+ V+K+ V +AL D Y+KC L A
Sbjct: 298 GKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADAL 357
Query: 298 LCFSEIS-NKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
FS + ++N+VSW A+I G P ++ L + + PNEFT+S +L++SL+
Sbjct: 358 NIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI 417
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
Q+H +I+ Y++ V +L+ SY+K G DAL+
Sbjct: 418 LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALS--------------------- 456
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ +E+ D+V+W+ +++ A GD + LF M I P+ +T
Sbjct: 457 -----------IFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTIS 505
Query: 476 SLLSACS-KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S++ AC+ + G H + K + V + L+ MY + G+I S+ +F T
Sbjct: 506 SVIDACACPSAGVDQGRQFHAISIKYRYHDA-ICVSSALVSMYSRKGNIDSAQIVFERQT 564
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
DR++++W ++IS +G++ +A+E FR+ME G + D V +AV+ C H GLV EG +
Sbjct: 565 DRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQ 624
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+ M R + + P M+HY C+VDL R G L E +I MPFP A++WRT L C+
Sbjct: 625 YFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACR 682
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 113/225 (50%), Gaps = 8/225 (3%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL---SCDSLNPVEGAQ 60
++VV++++++S +++ G E A +F M +G +P +FT ++ +C S +G Q
Sbjct: 464 KDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQ 523
Query: 61 LQASVLKNGLFCADAF-VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
A +K DA V +AL+ +Y R G +D VFE + LV+WNS++S + +H
Sbjct: 524 FHAISIKYRYH--DAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQH 581
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ-IHGLVIKNGFDYELLV 178
G+ + F ++ S + + +F+ VI G ++ + G+Q +V + + +
Sbjct: 582 GYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEH 641
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEI-RDVVSWNTIIGALAESEN 222
+V++Y + + + +D+ + W T++GA +N
Sbjct: 642 YACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKN 686
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 3/226 (1%)
Query: 428 LSQLERPDI-VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
L ++ R D V N V+ A G EVL+ F R + D+ T +L AC + +
Sbjct: 55 LDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
LG LH L K + L+DMY KCGS+ +++F M +NV+TWT+L++
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
+ F M G P+ +VL+A G + G + + + +G
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQ-SVKFGCR 233
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ + ++++ + G +++A+ + M + + W T + G Q
Sbjct: 234 SSVFVCNSLMNMYAKCGLVEDAKSVFNWME-TRDMVSWNTLMAGLQ 278
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 210/662 (31%), Positives = 335/662 (50%), Gaps = 46/662 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLL-SCDSLNPVE- 57
MP RN+VS+ S+IS Y++ G + A+ +F+ E P +F +L +C V
Sbjct: 79 MPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSL 138
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ +K L A+ +VGTAL+ LY + GC+DE + VF +P ++ VTWN++++ +
Sbjct: 139 GEQVHGIAVKLDLD-ANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYA 197
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G + LF + V + S LE G QIHG ++ + +
Sbjct: 198 QIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTS 257
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N L+++Y +C+ + +A K+F +E R++VSW T+I ++ +A+ ++ M+
Sbjct: 258 VINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAG 317
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P+ ++NSC L G+ IHA VIK LE D +V +AL+D YAKC++L A
Sbjct: 318 WQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEAR 377
Query: 298 LCFSEISNKNIVSWNALILGYASK---SSPTSIFLLIELLQLGYRPNEFTFSHVL---RS 351
F ++ + +S+NA+I GY+ + +IF + L RP+ TF +L S
Sbjct: 378 AVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSL--RPSLLTFVSLLGVSSS 435
Query: 352 SLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
LA +L Q+H LII+ G Y +L+ Y+K L++DA
Sbjct: 436 QLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDA------------------ 477
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+TV + L D+V WN +I A N +E ++LF + + + P+
Sbjct: 478 ------------KTV--FNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPN 523
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+TFV+L++ S L ++ G H I K + +D V N LIDMY KCG I +F
Sbjct: 524 EFTFVALVTVASTLASMFHGQQFHAWIIKAGV-DNDPHVSNALIDMYAKCGFIKEGRMLF 582
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+VI W ++I+ +G A+ AL+ FR M +P+ V + VL+AC H G V
Sbjct: 583 ESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVG 642
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
EG+ F M +Y +EP ++HY VV+L R G L A++ I MP P A +WR+ L
Sbjct: 643 EGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSA 702
Query: 651 CQ 652
C
Sbjct: 703 CH 704
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 153/567 (26%), Positives = 273/567 (48%), Gaps = 40/567 (7%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D F+ LL Y G L + +F+ MP ++LV+W S++S++ +HG + + LF
Sbjct: 52 DLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQ 111
Query: 134 RSEVAL-TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
++ + E V+ + + + GEQ+HG+ +K D + V +L+N+Y + +
Sbjct: 112 KASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCM 171
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
A +F + +R V+WNT+I A+ G ALEL+ RM ++ V P++ +++C
Sbjct: 172 DEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSAC 231
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
+ L G+ IH ++A E D V + L+D Y KC L A F + +N+VSW
Sbjct: 232 SALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWT 291
Query: 313 ALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS--SLA--FQLLQLHCLIIRM 367
+I GY S + +I + + Q G++P+ F + +L S SLA +Q Q+H +I+
Sbjct: 292 TMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKA 351
Query: 368 GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
E EYV +L+ YAK +++A RAV A
Sbjct: 352 DLEADEYVKNALIDMYAKCEHLTEA----------RAVFDA------------------- 382
Query: 428 LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNL 487
L D +S+N +I + N D E + +F+ MR + P TFVSLL S +
Sbjct: 383 ---LAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAI 439
Query: 488 ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISA 547
L +HGLI K+ S D + + LID+Y KC + + +FN + ++++ W ++I
Sbjct: 440 ELSKQIHGLIIKSG-TSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFG 498
Query: 548 LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
N + A++ F ++ G P+ +A++T + G + + ++ GV+
Sbjct: 499 HAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKA-GVDN 557
Query: 608 EMDHYHCVVDLLVRYGHLKEAEKIITT 634
+ + ++D+ + G +KE + +
Sbjct: 558 DPHVSNALIDMYAKCGFIKEGRMLFES 584
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 181/404 (44%), Gaps = 45/404 (11%)
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
L +IHA+ D+F+ + L+ Y+ L A F + ++N+VSW ++I Y
Sbjct: 36 LNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYT 95
Query: 320 SKSSPTSIFLLIELLQLGY--RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYE 373
L Q PNEF + VLR+ + + Q+H + +++ +
Sbjct: 96 QHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANV 155
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
YV +L+ YAK G + +A+ AL + RT
Sbjct: 156 YVGTALINLYAKLGCMDEAMLVFHALPV---------------RTP-------------- 186
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
V+WN VI A G LELF M + PD + S +SACS L L G +
Sbjct: 187 ---VTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQI 243
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
HG ++ +DT V N+LID+Y KC + ++ K+F+ M RN+++WT +IS N F
Sbjct: 244 HGYAYRSA-TETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSF 302
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY- 612
A+ F M G++PD A ++L +C + +G ++ + ++ + E D Y
Sbjct: 303 NAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKA---DLEADEYV 359
Query: 613 -HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
+ ++D+ + HL EA + + +A+ + +EG + R
Sbjct: 360 KNALIDMYAKCEHLTEARAVFDALA-EDDAISYNAMIEGYSKNR 402
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 218/742 (29%), Positives = 371/742 (50%), Gaps = 93/742 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-------L 53
M +R+VVS+N++I Y+ G+ +D+ MF M+ G P +T G +L +
Sbjct: 153 MMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIA 212
Query: 54 NPVEG------------------------------AQLQASVLKNGLFCADAFV------ 77
N + G L+ +LK LF + A +
Sbjct: 213 NQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHE 272
Query: 78 -----GTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF--VEDCMFLFC 130
G AL+ +Y + G +++ F++M K++++W S++S + KHG+ + ++F
Sbjct: 273 GIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFD 332
Query: 131 ELV-RSEVALTE--SSFVGV------------IHGLSNEQD-----------------LE 158
E+ R+E + + S +V V + GL E + +
Sbjct: 333 EMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMAD 392
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
G Q+HG V+K G ++ V +LV+ Y +++A+K+F+++ +VVSW +++ +
Sbjct: 393 EGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYS 452
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+S N G+ L +Y RM + V NQ TF V +SC L++ +LG + +I+ E V
Sbjct: 453 DSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVS 512
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLG 337
V ++L+ ++ ++E A F ++ +I+SWNA+I YA S+ + L
Sbjct: 513 VANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLH 572
Query: 338 YRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
N T S +L + L+ +H L++++G ++ + +L+T Y+++G DA
Sbjct: 573 NETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAE 632
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS---QLERPDIVSWNIVIAACAHNG 450
A+ R ++ N + Y + G+ + +K+L+ Q+ +PD V+WN +I A N
Sbjct: 633 LVFQAMT-ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENE 691
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
+ E ++ +K +R I P NY + L+A + L L G LHGL+ K SD V
Sbjct: 692 EPNEAVKAYKLIREKGI-PANYITMVSLAATANLAVLEEGQQLHGLVIKLGF-ESDLHVT 749
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
N +DMYGKCG + +K+ + +R+ ++W LISA +G Q+A E F EM LG K
Sbjct: 750 NAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPK 809
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
PD V +++L+AC HGGLV EG+ ++ M R +GV P ++H C++DLL R G L AE
Sbjct: 810 PDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEG 869
Query: 631 IITTMPFPPNALIWRTFLEGCQ 652
I MP PPN L WR+ L C+
Sbjct: 870 FIKEMPVPPNDLAWRSLLAACR 891
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 149/580 (25%), Positives = 284/580 (48%), Gaps = 18/580 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV---E 57
M RN S+++++S Y R G E+A+ +F M G EP F L++ S + E
Sbjct: 334 MRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADE 393
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ V+K G+ D +VGTAL+ YG G + +FE+MP ++V+W S++ +
Sbjct: 394 GFQVHGFVVKTGIL-GDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYS 452
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + + ++ + + V+ +++F V +D G Q+ G +I+ GF+ +
Sbjct: 453 DSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVS 512
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VANSL++M+ + + A +F + D++SWN +I A A ++L + M
Sbjct: 513 VANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLH 572
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
N TT +++ C+ + N G+ IH V+K L+ +V + + L+ Y++ E A
Sbjct: 573 NETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAE 632
Query: 298 LCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL----RSS 352
L F ++ ++++SWN+++ Y + +L ELLQ+G +P+ T++ ++ +
Sbjct: 633 LVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMG-KPDRVTWNALIGGHAENE 691
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL---AFVTALNIPRAVVPAN 409
+ ++ + LI G Y+ + + A ++ + V L + N
Sbjct: 692 EPNEAVKAYKLIREKGIPA-NYITMVSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTN 750
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+Y + G+ ++ +K+L Q +SWNI+I+A A +G +++ E F M P
Sbjct: 751 AAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKP 810
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D+ TFVSLLSAC+ + G + + + + + C +ID+ G+ G + +
Sbjct: 811 DHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGF 870
Query: 530 FNEM-TDRNVITWTALISALGLNG---FAQRALEKFREME 565
EM N + W +L++A ++G A++ E E++
Sbjct: 871 IKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELD 910
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 125/525 (23%), Positives = 224/525 (42%), Gaps = 99/525 (18%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
G IH +I NGF +L + L+ Y + + +A +F + R VVSW ++ ++
Sbjct: 49 GHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQ 108
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ F KA L+ M C V
Sbjct: 109 NGRFEKAFVLFSDMR---------------------------------------HCGVKA 129
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGY 338
ALVDF++KC +E A F + +++VSWNA+I GYA + F + +L+ G
Sbjct: 130 NHALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGL 189
Query: 339 RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-- 392
P+ +T VLR+S L Q+H +I ++GY +Y+ V G L+ +YAK+G + A
Sbjct: 190 VPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKD 249
Query: 393 -------------LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
A +T N + +Y ++G+ + + ++E +++SW
Sbjct: 250 LRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISW 309
Query: 440 NIVIAACAHNGD---------------------------------YKEVLELFKYMRAAR 466
+I+ A +G Y+E + LF M
Sbjct: 310 TSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLG 369
Query: 467 IYPDNYTFVSLLSACSKLCNLA-LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ P+ + SL++ACS+ +A G +HG + KT I+ D +V L+ YG G + +
Sbjct: 370 VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGIL-GDVYVGTALVHFYGSIGLVYN 428
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ K+F EM D NV++WT+L+ +G L ++ M G ++ V ++C
Sbjct: 429 AQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC-- 486
Query: 586 GGLVREGMELFERMNR--SYGVEPEMDHYHCVVDLLVRYGHLKEA 628
GL+ + + ++ + YG E + + ++ + + ++EA
Sbjct: 487 -GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEA 530
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 152/669 (22%), Positives = 281/669 (42%), Gaps = 164/669 (24%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+R+VVS+ +++S YS+ G E A +F M + G +
Sbjct: 91 MPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANH------------------- 131
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
AL+ + + G +++ +F M + +V+WN+++ + G
Sbjct: 132 -------------------ALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQG 172
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELL-- 177
F +D +F ++R + + V+ + L QIHG++ + G+ Y+++
Sbjct: 173 FADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTG 232
Query: 178 --------------------------------------------VANSLVNMYFQCAGIW 193
+ N+L++MY + I
Sbjct: 233 LLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIE 292
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFG----------------------------- 224
A++ F ++E ++V+SW ++I A+ +G
Sbjct: 293 DAKRAFDEMEEKNVISWTSLISGYAK-HGYGHMAHARYVFDEMRHRNEASWSTMLSGYVR 351
Query: 225 -----KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL---GKSIHAKVIKNALECD 276
+A+ L+ +M V PN +I +C+ ++ + G +H V+K + D
Sbjct: 352 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACS--RSGYMADEGFQVHGFVVKTGILGD 409
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQ 335
V+VG+ALV FY + A F E+ + N+VSW +L++GY+ +P + + + + Q
Sbjct: 410 VYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQ 469
Query: 336 LGYRPNEFTFSHVLRSS--LAFQLLQLHCL--IIRMGYENYEYVLGSLMTSYAKSGLISD 391
G N+ TF+ V S L Q+L L II+ G+E+
Sbjct: 470 EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFED-------------------- 509
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
+V AN + +++ E + + DI+SWN +I+A AH+G
Sbjct: 510 ------------SVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGL 557
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+E L F +MR ++ T SLLS CS + NL G +HGL+ K + S+ +CN
Sbjct: 558 CRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLG-LDSNVCICN 616
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
L+ +Y + G + +F MT+R++I+W ++++ +G L+ E+ +G KP
Sbjct: 617 TLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMG-KP 675
Query: 572 DRVALIAVL 580
DRV A++
Sbjct: 676 DRVTWNALI 684
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 142/612 (23%), Positives = 253/612 (41%), Gaps = 98/612 (16%)
Query: 11 SIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGL 70
S I + G + +AL++ R +P+ + L D +G + ++ NG
Sbjct: 3 SKIQSACNLGRLAEALKLLSSNPTR-LDPSLYLKILQLCIDKKAKKQGHLIHTHLITNG- 60
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFC 130
F +D + T L+ Y + G + +VF+ MP +S+V+W ++VS + ++G E LF
Sbjct: 61 FGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFS 120
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
++ V ++LV+ + +C
Sbjct: 121 DMRHCGVKAN---------------------------------------HALVDFHSKCG 141
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
+ A +F + RDVVSWN +IG A + ++ M + P+ T V+
Sbjct: 142 KMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLR 201
Query: 251 SCAGLQNSILGKSIHAKVI-------------------------------KNALECDVF- 278
+ A I+ IH + K L+ D+F
Sbjct: 202 ASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFS 261
Query: 279 ---------------VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS 323
+G+AL+D YAK +E A F E+ KN++SW +LI GYA
Sbjct: 262 STALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGY 321
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
++ +R NE ++S +L R L + + L C + +G E +++ SL
Sbjct: 322 GHMAHARYVFDEMRHR-NEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASL 380
Query: 380 MTSYAKSGLISD----ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
+T+ ++SG ++D FV I V + Y G KL ++ +
Sbjct: 381 ITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHN 440
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
+VSW ++ + +G+ EVL +++ MR + + TF ++ S+C L + LG + G
Sbjct: 441 VVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLG 500
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
I + S + V N LI M+ S+ + +F+ M + ++I+W A+ISA +G +
Sbjct: 501 HIIQYGFEDSVS-VANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCR 559
Query: 556 RALEKFREMEFL 567
+L F M L
Sbjct: 560 ESLRCFHWMRHL 571
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 162/435 (37%), Gaps = 121/435 (27%)
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
N G+ E +S + + + ++ ++ C + G IH +I N D+ + +
Sbjct: 10 NLGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNT 69
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRP 340
L+ FY K ++ A F + +++VSW A++ GY+ F+L ++ G +
Sbjct: 70 KLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKA 129
Query: 341 NEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
N L+ H +M E+ Y+ G++M
Sbjct: 130 NH-------------ALVDFHSKCGKM--EDASYLFGTMM-------------------- 154
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
ER D+VSWN +I A G + +F+
Sbjct: 155 -------------------------------ER-DVVSWNAMIGGYAVQGFADDSFCMFR 182
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK---------------------- 498
M + PD YT S+L A ++ L + + +HG+I
Sbjct: 183 SMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNG 242
Query: 499 -------------KTEIISSDTFVC-----------NMLIDMYGKCGSIGSSVKIFNEMT 534
K ++ SS + N LIDMY K G I + + F+EM
Sbjct: 243 SLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEME 302
Query: 535 DRNVITWTALISALGLNGFAQRALEK--FREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
++NVI+WT+LIS +G+ A + F EM + + +L+ GL E
Sbjct: 303 EKNVISWTSLISGYAKHGYGHMAHARYVFDEMR----HRNEASWSTMLSGYVRVGLYEEA 358
Query: 593 MELFERMNRSYGVEP 607
+ LF +M GVEP
Sbjct: 359 VGLFCQM-WGLGVEP 372
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 213/679 (31%), Positives = 334/679 (49%), Gaps = 54/679 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGF------EPTQFTFG-GLLSCDSL 53
MP RN+VS+ S IS Y++ G +DAL +F + G P +F L +C
Sbjct: 91 MPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQS 150
Query: 54 NPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
G Q+ K GL A+ FVGTAL+ LY + G +D +SVF+ +P ++ VTW ++
Sbjct: 151 RAARFGEQVHGVAAKLGL-DANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAV 209
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
++ + + G + LF + V S +E G QIHG +
Sbjct: 210 ITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAA 269
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ + V N+L+++Y +C+ + A ++F +E R++VSW T+I ++ +A+ ++ +
Sbjct: 270 ESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQ 329
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+S P+ ++NSC L G+ +HA VIK LE D +V +AL+D YAKC++
Sbjct: 330 LSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEH 389
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVL-- 349
L A F ++ + +S+NA+I GYA T ++ + ++ +P+ TF +L
Sbjct: 390 LTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGV 449
Query: 350 ---RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
RS L Q+H LI++ G Y +L+ Y+K L+ DA
Sbjct: 450 SSSRSDLELSK-QIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDA-------------- 494
Query: 407 PANIIAGIYNRTGQYNETVKLL-SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
KL+ S ++ D+V WN +I A N +E ++LF +R +
Sbjct: 495 -------------------KLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVS 535
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ P+ +TFV+L++ S L ++ G H I K SD + N LIDMY KCG I
Sbjct: 536 GLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGA-DSDPHISNALIDMYAKCGFIEE 594
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+F ++VI W ++IS +G A+ AL F ME G +P+ V ++VL+AC H
Sbjct: 595 GRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAH 654
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GLV EG+ F M Y VEP +HY VV+L R G L A++ I MP P A IWR
Sbjct: 655 AGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWR 714
Query: 646 TFLEGCQ---RCRIAKYDT 661
+ L C I +Y T
Sbjct: 715 SLLSACHLFGNVEIGRYAT 733
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 164/579 (28%), Positives = 278/579 (48%), Gaps = 46/579 (7%)
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A + +GL D F+ LL Y + G L + +F+ MP ++LV+W S +S++ +HG
Sbjct: 53 HARAVVSGLL-PDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGR 111
Query: 122 VEDCMFLFCELVRSEVALTESS------FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+D + LF + A + + + + FGEQ+HG+ K G D
Sbjct: 112 EDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDAN 171
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V +LVN+Y + I +A +F + R+ V+W +I +++ G ALEL+ RM +
Sbjct: 172 VFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGL 231
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D V P++ ++C+GL G+ IH + A E D V +AL+D Y KC L
Sbjct: 232 DGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLL 291
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS--S 352
A F + N+N+VSW +I GY S T ++ + +L Q G++P+ F + +L S S
Sbjct: 292 ARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGS 351
Query: 353 LA--FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
LA +Q Q+H +I+ E+ EYV +L+ YAK +++A RAV A
Sbjct: 352 LAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEA----------RAVFEA-- 399
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
L D +S+N +I A GD +E+F MR + P
Sbjct: 400 --------------------LAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPS 439
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TFVSLL S +L L +HGLI K+ S D + + LID+Y K + + +F
Sbjct: 440 LLTFVSLLGVSSSRSDLELSKQIHGLIVKSG-TSLDLYAGSALIDVYSKFSLVDDAKLVF 498
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ M +R+++ W A+I L N + A++ F + G P+ +A++T +
Sbjct: 499 SLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIF 558
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
G + ++ ++ G + + + ++D+ + G ++E
Sbjct: 559 HGQQFHAQIIKA-GADSDPHISNALIDMYAKCGFIEEGR 596
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 178/402 (44%), Gaps = 50/402 (12%)
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
HA+ + + L D+F+ + L+ Y+K L A F + ++N+VSW + I YA
Sbjct: 53 HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112
Query: 325 TSIFLLIELLQL-------GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYE 373
LL G PNEF + LR+ + Q+H + ++G +
Sbjct: 113 DDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANV 172
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
+V +L+ YAK+G I A++ AL V +I G Y++ GQ
Sbjct: 173 FVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITG-YSQAGQ------------- 218
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
A A LELF M + PD + S SACS L + G +
Sbjct: 219 ----------AGVA--------LELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQI 260
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
HG +T SD V N LID+Y KC + + ++F+ M +RN+++WT +I+ N
Sbjct: 261 HGYAYRTA-AESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSL 319
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY- 612
A+ F ++ G++PD A ++L +C + +G ++ + ++ + E D Y
Sbjct: 320 DTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKA---DLESDEYV 376
Query: 613 -HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ ++D+ + HL EA + + +A+ + +EG R
Sbjct: 377 KNALIDMYAKCEHLTEARAVFEALA-EDDAISYNAMIEGYAR 417
>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
Length = 691
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 204/657 (31%), Positives = 333/657 (50%), Gaps = 45/657 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
+PD VS++S+++AYS G DAL F M RG ++ +L C + + GAQ
Sbjct: 63 IPDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLKC-APDVRFGAQ 121
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP--RKSLVTWNSIVSIFGK 118
+ A + L D FV AL+ +YG G +DE +F D P ++ V+WN ++S + K
Sbjct: 122 VHALAVATRLI-QDVFVTNALVAMYGGFGMVDEAKRIF-DEPGGERNAVSWNGMISAYVK 179
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ D + +F E+V S E F V++ + +D E G Q+HG+V++ G+D ++
Sbjct: 180 NDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFT 239
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN+LV+MY + I A +F+ + DVVSWN +I + +ALEL L+M V
Sbjct: 240 ANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGV 299
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T V+ +CAG LG+ IH +IK + D FV LVD YAK L+ A
Sbjct: 300 VPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARK 359
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ---LGYRPNEFTFSHVLRSSLAF 355
F + ++++ WNALI G + + L ++ L N T + VL+S+ +
Sbjct: 360 VFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASL 419
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ + Q+H L ++G + +V+ L+ SY K
Sbjct: 420 EAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWK-------------------------- 453
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
G+ + +K+ + DI+S ++ A + ++ ++LF M + PD+
Sbjct: 454 ------CGRLDYAIKVFEESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDS 507
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ SLL+AC+ L G +H + K + +SD F N L+ Y KCGSI + F+
Sbjct: 508 FVLSSLLNACASLSAYEQGKQVHAHLIKRQF-TSDVFAGNALVYTYAKCGSIEDADMAFS 566
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ ++ V++W+A+I L +G +RALE F M G P+ + L +VL+AC H GLV +
Sbjct: 567 GLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLVDD 626
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ FE M ++G++ +HY C++D+L R G LK+A +++ MPF NA +W L
Sbjct: 627 AKKYFESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMELVNNMPFQANAAVWGALL 683
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 157/534 (29%), Positives = 266/534 (49%), Gaps = 47/534 (8%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
GA L + +LK+GL A LL Y R +VF+++P V+W+S+V+ +
Sbjct: 23 GAHLHSHLLKSGLL---ASYSNHLLSFYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYS 79
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G D ++ F + V E + V L D+ FG Q+H L + ++
Sbjct: 80 NNGMPRDALWAFRSMRGRGVPCNEYALPIV---LKCAPDVRFGAQVHALAVATRLIQDVF 136
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V N+LV MY + A+++F + R+ VSWN +I A +++ A+ ++ M
Sbjct: 137 VTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKNDRCRDAVGVFREMVWS 196
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
PN+ F V+N+C G ++ G+ +H V++ + DVF +ALVD Y+K ++E A
Sbjct: 197 GERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMA 256
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRS---S 352
+ F +I ++VSWNALI G + ++ LL+++ LG PN FT S VL++ +
Sbjct: 257 AVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGA 316
Query: 353 LAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
AF L Q+H +I+ ++ E+V L+ YAK G + DA
Sbjct: 317 GAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDAR------------------ 358
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD- 470
K+ + R D++ WN +I+ C+H+G + EVL LF MR + D
Sbjct: 359 --------------KVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDV 404
Query: 471 -NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
T ++L + + L + +H L +K ++ SD+ V N LID Y KCG + ++K+
Sbjct: 405 NRTTLAAVLKSTASLEAICHTKQVHALAEKIGLL-SDSHVVNGLIDSYWKCGRLDYAIKV 463
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
F E ++I+ T++++AL + A++ F +M G +PD L ++L AC
Sbjct: 464 FEESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNAC 517
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 186/405 (45%), Gaps = 47/405 (11%)
Query: 254 GLQNSIL-GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
G S+L G +H+ ++K+ L + L+ FY++C A F EI + VSW+
Sbjct: 15 GASRSLLAGAHLHSHLLKSGLLASY--SNHLLSFYSRCRLPSAARAVFDEIPDPCHVSWS 72
Query: 313 ALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL-LQLHCLIIRMGYE 370
+L+ Y++ P +++ + G NE+ VL+ + + Q+H L +
Sbjct: 73 SLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLKCAPDVRFGAQVHALAV----- 127
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ LI D FVT N + +Y G +E ++ +
Sbjct: 128 --------------ATRLIQD--VFVT-----------NALVAMYGGFGMVDEAKRIFDE 160
Query: 431 L--ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
ER + VSWN +I+A N ++ + +F+ M + P+ + F +++AC+ +
Sbjct: 161 PGGER-NAVSWNGMISAYVKNDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWE 219
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G +HG++ +T D F N L+DMY K G I + +F ++ +V++W ALI+
Sbjct: 220 TGRQVHGMVVRTG-YDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGC 278
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
+G RALE +M+ LG P+ L +VL AC G G ++ M ++ + +
Sbjct: 279 VTHGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKA---DAD 335
Query: 609 MDHYHCV--VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
D + V VD+ + G L +A K+ MP + ++W + GC
Sbjct: 336 SDEFVAVGLVDMYAKDGFLDDARKVFDFMP-RRDLILWNALISGC 379
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
+L G+ LH + K+ +++S N L+ Y +C ++ +F+E+ D ++W++L+
Sbjct: 19 SLLAGAHLHSHLLKSGLLAS---YSNHLLSFYSRCRLPSAARAVFDEIPDPCHVSWSSLV 75
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC---RHGGLVREGMELFERMNRS 602
+A NG + AL FR M G + AL VL R G V + + R+ +
Sbjct: 76 TAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLKCAPDVRFGAQV-HALAVATRLIQD 134
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG---CQRCRIA 657
V + +V + +G + EA++I NA+ W + RCR A
Sbjct: 135 VFVT------NALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKNDRCRDA 186
>gi|255545144|ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547541|gb|EEF49036.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 207/659 (31%), Positives = 344/659 (52%), Gaps = 43/659 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP R+VVS+ I+SA+ + E+AL +F +M+ G P FTF +L SC +L G
Sbjct: 80 MPCRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYG 139
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ AS +K+G F ++ +G++L+ LY R ++ +F M V+W ++++ +
Sbjct: 140 KRIHASSIKHG-FESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQ 198
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + ++ E++ ++V+ E +FV ++ S+ L++G+ IH I G L++
Sbjct: 199 AGKCSHALRIYMEMLEAQVSSNEFTFVRLL-AASSFIGLQYGKLIHAHAIVLGVKLNLVL 257
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LVNMY +C I A K+ K DV+ W II LA++ F +A+ + +M + V
Sbjct: 258 KTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKMEISGV 317
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL-EGAH 297
+ T++ +++ C + + LG+ IH++VI+ LE DV VG+ALVD Y KC + E
Sbjct: 318 SASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGL 377
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA-- 354
F I + N++SW +LI G+A S+ L +E+ +G +PN FT S VLR A
Sbjct: 378 RMFRGIKSPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIK 437
Query: 355 --FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+Q L+LH II+ +Y+ V+G N +
Sbjct: 438 SPYQTLKLHGHIIKTK-ADYDVVVG-------------------------------NALV 465
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
Y +G+ ++ +++ + + D +++ + G ++ L + +M A + D +
Sbjct: 466 DAYAGSGRVDDAWRVVKDMNQRDSITYTSLATRLNQMGYHELALSVISHMFNADVKIDGF 525
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+ SA + L + G LH K+ + S V N LID+YGK G + + + F E
Sbjct: 526 SLTCFFSASASLGRIETGKQLHCYSLKSGL-SCCLSVANGLIDLYGKYGLVHEARRAFTE 584
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+T+ +V++W LIS L NG AL F +M G +PD + + VL+ C HGGLV G
Sbjct: 585 ITEPDVVSWNGLISGLASNGHISSALSAFDDMRLRGIQPDSITFLLVLSTCSHGGLVDMG 644
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
++ F M + VEP+ DHY C+VD+L R G L+EA II TMP P+A I++T L C
Sbjct: 645 LQYFHSMREMHDVEPQSDHYVCLVDILGRAGRLEEAMNIIETMPLEPDASIYKTLLAAC 703
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/436 (30%), Positives = 221/436 (50%), Gaps = 34/436 (7%)
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
L N + L+ G IH +IK G L + N+L+++Y +C + A + F ++ RDVVSW
Sbjct: 29 LCNLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCRDVVSW 88
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
I+ A ++E +AL+++ M + +PN TF ++ SC L + GK IHA IK
Sbjct: 89 TGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIHASSIK 148
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG--YASKSSPTSIF 328
+ E + +GS+L+D Y++ D+ E A FS + + + VSW +I A K S ++
Sbjct: 149 HGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAGKCSH-ALR 207
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
+ +E+L+ NEFTF +L +S +F LQ LI + VLG + K+ L
Sbjct: 208 IYMEMLEAQVSSNEFTFVRLLAAS-SFIGLQYGKLI-----HAHAIVLGVKLNLVLKTAL 261
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
++ +Y+R + + +K+ D++ W +I+ A
Sbjct: 262 VN-----------------------MYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQ 298
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
N ++E + F M + + N+T++S+LS C + +L LG +H + +T + D
Sbjct: 299 NMKFQEAVAAFHKMEISGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTG-LEDDVP 357
Query: 509 VCNMLIDMYGKCGSI-GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
V N L+DMY KC I +++F + NVI+WT+LI+ +GF Q +L F EM +
Sbjct: 358 VGNALVDMYMKCSCIVEHGLRMFRGIKSPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTV 417
Query: 568 GFKPDRVALIAVLTAC 583
G +P+ L VL C
Sbjct: 418 GVQPNSFTLSIVLRVC 433
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 140/560 (25%), Positives = 256/560 (45%), Gaps = 44/560 (7%)
Query: 98 FEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL 157
F++MP + +V+W I+S K+ E+ + +F +V S +F ++ D
Sbjct: 77 FDEMPCRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDF 136
Query: 158 EFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL 217
+G++IH IK+GF+ ++ +SL+++Y + A K+F ++ D VSW T+I +
Sbjct: 137 SYGKRIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASC 196
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVI--NSCAGLQNSILGKSIHAKVIKNALEC 275
++ AL +Y+ M V N+ TFV ++ +S GLQ GK IHA I ++
Sbjct: 197 VQAGKCSHALRIYMEMLEAQVSSNEFTFVRLLAASSFIGLQ---YGKLIHAHAIVLGVKL 253
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
++ + +ALV+ Y++C +E A +++ W A+I G A ++
Sbjct: 254 NLVLKTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKME 313
Query: 336 L-GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
+ G + FT+ +L ++ L Q+H +IR G E+ V +L+ Y K I
Sbjct: 314 ISGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIV 373
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
+ +++ ++ P+++SW +IA A +G
Sbjct: 374 E-------------------------------HGLRMFRGIKSPNVISWTSLIAGFAEHG 402
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
++ L LF MR + P+++T +L CS + + LHG I KT+ D V
Sbjct: 403 FQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIKSPYQTLKLHGHIIKTK-ADYDVVVG 461
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
N L+D Y G + + ++ +M R+ IT+T+L + L G+ + AL M K
Sbjct: 462 NALVDAYAGSGRVDDAWRVVKDMNQRDSITYTSLATRLNQMGYHELALSVISHMFNADVK 521
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
D +L +A G + G +L +S G+ + + ++DL +YG + EA +
Sbjct: 522 IDGFSLTCFFSASASLGRIETGKQLHCYSLKS-GLSCCLSVANGLIDLYGKYGLVHEARR 580
Query: 631 IITTMPFPPNALIWRTFLEG 650
T + P+ + W + G
Sbjct: 581 AFTEIT-EPDVVSWNGLISG 599
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 181/397 (45%), Gaps = 44/397 (11%)
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
G IH+ +IK L+ +++ + L+ Y+KC ++E A F E+ +++VSW ++ +
Sbjct: 38 GVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCRDVVSWTGILSAHIK 97
Query: 321 KSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYV 375
+ + + L G PN FTFS +LRS A ++H I+ G+E+ + +
Sbjct: 98 NERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIHASSIKHGFESNQ-I 156
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
LGS + +Y+R + KL S ++ D
Sbjct: 157 LGSSLID-------------------------------LYSRFDSTEDACKLFSYMDSGD 185
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL-- 493
VSW VIA+C G L ++ M A++ + +TFV LL+A S L G +
Sbjct: 186 TVSWTTVIASCVQAGKCSHALRIYMEMLEAQVSSNEFTFVRLLAA-SSFIGLQYGKLIHA 244
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H ++ ++ + + L++MY +C I ++K+ + +VI WTA+IS L N
Sbjct: 245 HAIVLGVKL---NLVLKTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMK 301
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
Q A+ F +ME G +++L+ C + G ++ R+ R+ G+E ++ +
Sbjct: 302 FQEAVAAFHKMEISGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRT-GLEDDVPVGN 360
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+VD+ ++ + E + PN + W + + G
Sbjct: 361 ALVDMYMKCSCIVEHGLRMFRGIKSPNVISWTSLIAG 397
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 326/622 (52%), Gaps = 45/622 (7%)
Query: 36 GFEPTQFTFGGLLSCDSLNP--VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDE 93
G + +F F +L ++ V G Q+ V+ G F +D FV +L+ LY + G +
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTG-FDSDEFVANSLVILYAKCGGFGD 63
Query: 94 VVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
S+F+ +P +S+V+WN++ S + + + LF ++V S + E S +I+ +
Sbjct: 64 ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTG 123
Query: 154 EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTI 213
+D G +IHG +IK G+D + AN+LV+MY + + A +F ++ D+VSWN I
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAI 183
Query: 214 IGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
I E +ALEL M+ + PN T + +CAG+ LG+ +H+ +IK +
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDM 243
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS---PTSIFLL 330
D F+G L+D Y+KC++++ A L F + +++++WNA+I G++ S+F L
Sbjct: 244 GSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPL 303
Query: 331 IELLQLGYRPNEFTFSHVLRSSLAFQL----LQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
+ +G+ N+ T S VL+S A Q Q+H L ++ G+E YV+ SL+ +Y K
Sbjct: 304 MHTEGIGF--NQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKC 361
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
G + DA ++ + D+V + ++ A
Sbjct: 362 GHVEDA--------------------------------TRVFEESPIVDLVLFTSLVTAY 389
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
A +G +E L L+ M+ I PD++ SLL+AC+ L G +H I K +S D
Sbjct: 390 AQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMS-D 448
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
F N L++MY KCGSI + F+ + R +++W+A+I L +G+ + AL+ F++M
Sbjct: 449 IFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLK 508
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
+G P+ + L++VL AC H GLV E F M +G+EP +HY C++DLL R G L+
Sbjct: 509 VGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLE 568
Query: 627 EAEKIITTMPFPPNALIWRTFL 648
A +++ MPF NAL+W L
Sbjct: 569 AAMELVNKMPFQANALVWGALL 590
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 151/558 (27%), Positives = 276/558 (49%), Gaps = 47/558 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEG 58
+PDR+VVS+N++ S Y +A+ +F M+ G P +F+ +++ C L + V+G
Sbjct: 71 IPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQG 130
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ ++K G + +DAF AL+ +Y + G L++ SVF+++ + +V+WN+I++
Sbjct: 131 RKIHGYLIKLG-YDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVL 189
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
H + + L E+ +S + + + + E G Q+H +IK + +
Sbjct: 190 HEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFL 249
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
L++MY +C + A +FK + RD+++WN +I +++E +A L+ M + +
Sbjct: 250 GVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGI 309
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
NQTT V+ S A LQ + + + IHA +K+ E D +V ++L+D Y KC ++E A
Sbjct: 310 GFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATR 369
Query: 299 CFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF-- 355
F E ++V + +L+ YA ++ L +E+ G +P+ F S +L + +
Sbjct: 370 VFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSA 429
Query: 356 --QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIA 412
Q Q+H I++ G+ + + SL+ YAK G I DA AF
Sbjct: 430 YEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAF----------------- 472
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
S++ IVSW+ +I A +G KE L+LFK M + P++
Sbjct: 473 ----------------SRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHI 516
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIIS--SDTFVCNMLIDMYGKCGSIGSSVKIF 530
T VS+L AC+ +A +K I + + C +ID+ G+ G + +++++
Sbjct: 517 TLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYAC--MIDLLGRAGKLEAAMELV 574
Query: 531 NEMT-DRNVITWTALISA 547
N+M N + W AL+ A
Sbjct: 575 NKMPFQANALVWGALLGA 592
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 197/656 (30%), Positives = 332/656 (50%), Gaps = 41/656 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGAQL 61
R+ VS+ +++S Y++ G E+AL ++ M G PT + +LS + + +G +
Sbjct: 106 RDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLI 165
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A K+G FC++ FVG A++ LY R G VF DMP + VT+N+++S + G
Sbjct: 166 HAQGYKHG-FCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGH 224
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E + +F E+ S ++ + ++ ++ DL+ G Q+H + K G + ++ S
Sbjct: 225 GEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS 284
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+++Y +C + +A +F + +VV WN ++ A + + K+ EL+ +M + PN
Sbjct: 285 LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
Q T+ ++ +C + LG+ IH+ +K E D++V L+D Y+K LE A
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404
Query: 302 EISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF----Q 356
+ K++VSW ++I GY ++ E+ + G P+ + + Q
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
LQ+H I GY SG +S A V +Y
Sbjct: 465 GLQIHARIYVSGY----------------SGDVSIWNALVN----------------LYA 492
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
R G+ E ++E D ++WN +++ A +G ++E L++F M + + + +TFVS
Sbjct: 493 RCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVS 552
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LSA + L + G +H + KT S +T V N LI +YGKCGS + F+EM++R
Sbjct: 553 ALSASANLAEIKQGKQIHARVIKTG-HSFETEVGNALISLYGKCGSFEDAKMEFSEMSER 611
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
N ++W +I++ +G AL+ F +M+ G KP+ V I VL AC H GLV EG+ F
Sbjct: 612 NEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYF 671
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ M+ YG+ P DHY CV+D+ R G L A+K I MP +A++WRT L C+
Sbjct: 672 KSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACK 727
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 150/557 (26%), Positives = 277/557 (49%), Gaps = 45/557 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+ V+FN++IS +++CG+ E AL +F M G P T LL+ C SL ++ G
Sbjct: 204 MPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKG 263
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL + + K G+ +D + +LL LY + G ++ + +F R ++V WN ++ FG+
Sbjct: 264 TQLHSYLFKAGI-SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ LFC++ + + + ++ ++ + ++++ GEQIH L +K GF+ ++ V
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ L++MY + + A ++ + ++ +DVVSW ++I + E AL + M +
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+P+ I+ CAG+ G IHA++ + DV + +ALV+ YA+C + A
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFS 502
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF-- 355
F EI +K+ ++WN L+ G+A ++ + + + Q G + N FTF L +S
Sbjct: 503 SFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAE 562
Query: 356 --QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q Q+H +I+ G+ ++E +G N +
Sbjct: 563 IKQGKQIHARVIKTGH-SFETEVG-------------------------------NALIS 590
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y + G + + S++ + VSWN +I +C+ +G E L+LF M+ I P++ T
Sbjct: 591 LYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVT 650
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
F+ +L+ACS + + G S + I D + C +ID++G+ G + + K
Sbjct: 651 FIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC--VIDIFGRAGQLDRAKKFIE 708
Query: 532 EMT-DRNVITWTALISA 547
EM + + W L+SA
Sbjct: 709 EMPIAADAMVWRTLLSA 725
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 148/582 (25%), Positives = 281/582 (48%), Gaps = 40/582 (6%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
VG L+ LY ++G + VFE++ + V+W +++S + ++G E+ + L+ ++ R+
Sbjct: 79 VGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAG 138
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
V T V+ + + G IH K+GF E+ V N+++ +Y +C AE
Sbjct: 139 VVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAE 198
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
++F D+ RD V++NT+I A+ + ALE++ M + P+ T ++ +CA L
Sbjct: 199 RVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG 258
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ G +H+ + K + D + +L+D Y KC ++E A + F+ N+V WN +++
Sbjct: 259 DLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLV 318
Query: 317 GYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYEN 371
+ + F L ++ G RPN+FT+ +LR+ + + Q+H L ++ G+E+
Sbjct: 319 AFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFES 378
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
YV G L+ Y+K G + A ++L L
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKAR--------------------------------RVLEML 406
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
+ D+VSW +IA + K+ L FK M+ I+PDN S +S C+ + + G
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL 466
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H I + S D + N L+++Y +CG I + F E+ ++ ITW L+S +
Sbjct: 467 QIHARIYVSGY-SGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQS 525
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G + AL+ F M+ G K + ++ L+A + +++G ++ R+ ++ G E +
Sbjct: 526 GLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT-GHSFETEV 584
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ ++ L + G ++A+ + M N + W T + C +
Sbjct: 585 GNALISLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQ 625
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 249/534 (46%), Gaps = 40/534 (7%)
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG-LSNEQDLEF 159
M R+ + ++ F H + LF + R L F + N + +
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
+IH + G +V N L+++Y + + A ++F+++ RD VSW ++ A+
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ +AL LY +M V P V++SC + G+ IHA+ K+ ++FV
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GY 338
G+A++ Y +C + A F ++ +++ V++N LI G+A + E +Q G
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL 240
Query: 339 RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
P+ T S +L + + L QLH + + G + + GSL+ Y K G + AL
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
I+N + +R ++V WN+++ A D +
Sbjct: 301 -------------------IFNSS-------------DRTNVVLWNLMLVAFGQINDLAK 328
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
ELF M+AA I P+ +T+ +L C+ + LG +H L KT SD +V +LI
Sbjct: 329 SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTG-FESDMYVSGVLI 387
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
DMY K G + + ++ + +++V++WT++I+ + + AL F+EM+ G PD +
Sbjct: 388 DMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNI 447
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
L + ++ C +R+G+++ R+ S G ++ ++ +V+L R G ++EA
Sbjct: 448 GLASAISGCAGINAMRQGLQIHARIYVS-GYSGDVSIWNALVNLYARCGRIREA 500
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 197/656 (30%), Positives = 332/656 (50%), Gaps = 41/656 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGAQL 61
R+ VS+ +++S Y++ G E+AL ++ M G PT + +LS + + +G +
Sbjct: 106 RDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLI 165
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A K+G FC++ FVG A++ LY R G VF DMP + VT+N+++S + G
Sbjct: 166 HAQGYKHG-FCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGH 224
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E + +F E+ S ++ + ++ ++ DL+ G Q+H + K G + ++ S
Sbjct: 225 GEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS 284
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+++Y +C + +A +F + +VV WN ++ A + + K+ EL+ +M + PN
Sbjct: 285 LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
Q T+ ++ +C + LG+ IH+ +K E D++V L+D Y+K LE A
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404
Query: 302 EISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF----Q 356
+ K++VSW ++I GY ++ E+ + G P+ + + Q
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
LQ+H I GY SG +S A V +Y
Sbjct: 465 GLQIHARIYVSGY----------------SGDVSIWNALVN----------------LYA 492
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
R G+ E ++E D ++WN +++ A +G ++E L++F M + + + +TFVS
Sbjct: 493 RCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVS 552
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LSA + L + G +H + KT S +T V N LI +YGKCGS + F+EM++R
Sbjct: 553 ALSASANLAEIKQGKQIHARVIKTG-HSFETEVGNALISLYGKCGSFEDAKMEFSEMSER 611
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
N ++W +I++ +G AL+ F +M+ G KP+ V I VL AC H GLV EG+ F
Sbjct: 612 NEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYF 671
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ M+ YG+ P DHY CV+D+ R G L A+K I MP +A++WRT L C+
Sbjct: 672 KSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACK 727
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 150/557 (26%), Positives = 277/557 (49%), Gaps = 45/557 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+ V+FN++IS +++CG+ E AL +F M G P T LL+ C SL ++ G
Sbjct: 204 MPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKG 263
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL + + K G+ +D + +LL LY + G ++ + +F R ++V WN ++ FG+
Sbjct: 264 TQLHSYLFKAGI-SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ LFC++ + + + ++ ++ + ++++ GEQIH L +K GF+ ++ V
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ L++MY + + A ++ + ++ +DVVSW ++I + E AL + M +
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+P+ I+ CAG+ G IHA++ + DV + +ALV+ YA+C + A
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFS 502
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF-- 355
F EI +K+ ++WN L+ G+A ++ + + + Q G + N FTF L +S
Sbjct: 503 SFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAE 562
Query: 356 --QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q Q+H +I+ G+ ++E +G N +
Sbjct: 563 IKQGKQIHARVIKTGH-SFETEVG-------------------------------NALIS 590
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y + G + + S++ + VSWN +I +C+ +G E L+LF M+ I P++ T
Sbjct: 591 LYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVT 650
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
F+ +L+ACS + + G S + I D + C +ID++G+ G + + K
Sbjct: 651 FIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC--VIDIFGRAGQLDRAKKFIE 708
Query: 532 EMT-DRNVITWTALISA 547
EM + + W L+SA
Sbjct: 709 EMPIAADAMVWRTLLSA 725
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 148/582 (25%), Positives = 281/582 (48%), Gaps = 40/582 (6%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
VG L+ LY ++G + VFE++ + V+W +++S + ++G E+ + L+ ++ R+
Sbjct: 79 VGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAG 138
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
V T V+ + + G IH K+GF E+ V N+++ +Y +C AE
Sbjct: 139 VVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAE 198
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
++F D+ RD V++NT+I A+ + ALE++ M + P+ T ++ +CA L
Sbjct: 199 RVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG 258
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ G +H+ + K + D + +L+D Y KC ++E A + F+ N+V WN +++
Sbjct: 259 DLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLV 318
Query: 317 GYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYEN 371
+ + F L ++ G RPN+FT+ +LR+ + + Q+H L ++ G+E+
Sbjct: 319 AFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFES 378
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
YV G L+ Y+K G + A ++L L
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKAR--------------------------------RVLEML 406
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
+ D+VSW +IA + K+ L FK M+ I+PDN S +S C+ + + G
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL 466
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H I + S D + N L+++Y +CG I + F E+ ++ ITW L+S +
Sbjct: 467 QIHARIYVSGY-SGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQS 525
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G + AL+ F M+ G K + ++ L+A + +++G ++ R+ ++ G E +
Sbjct: 526 GLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT-GHSFETEV 584
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ ++ L + G ++A+ + M N + W T + C +
Sbjct: 585 GNALISLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQ 625
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 249/534 (46%), Gaps = 40/534 (7%)
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG-LSNEQDLEF 159
M R+ + ++ F H + LF + R L F + N + +
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
+IH + G +V N L+++Y + + A ++F+++ RD VSW ++ A+
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ +AL LY +M V P V++SC + G+ IHA+ K+ ++FV
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GY 338
G+A++ Y +C + A F ++ +++ V++N LI G+A + E +Q G
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL 240
Query: 339 RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
P+ T S +L + + L QLH + + G + + GSL+ Y K G + AL
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
I+N + +R ++V WN+++ A D +
Sbjct: 301 -------------------IFNSS-------------DRTNVVLWNLMLVAFGQINDLAK 328
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
ELF M+AA I P+ +T+ +L C+ + LG +H L KT SD +V +LI
Sbjct: 329 SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTG-FESDMYVSGVLI 387
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
DMY K G + + ++ + +++V++WT++I+ + + AL F+EM+ G PD +
Sbjct: 388 DMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNI 447
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
L + ++ C +R+G+++ R+ S G ++ ++ +V+L R G ++EA
Sbjct: 448 GLASAISGCAGINAMRQGLQIHARIYVS-GYSGDVSIWNALVNLYARCGRIREA 500
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 184/659 (27%), Positives = 343/659 (52%), Gaps = 41/659 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+R+VVS+NS++S Y G ++ +F+ M + TF +L +C + G
Sbjct: 98 MPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLG 157
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ ++ G F D G+AL+ +Y + LD+ VF +MP ++LV W+++++ + +
Sbjct: 158 LQVHCLAIQMG-FENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQ 216
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + + LF ++++ + +++S++ V + + G Q+HG +K+ F Y+ ++
Sbjct: 217 NDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSII 276
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ ++MY +C ++ A K+F + S+N II A + KAL+++ + + +
Sbjct: 277 GTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNL 336
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
++ + + +C+ ++ + G +H +K L ++ V + ++D Y KC L A L
Sbjct: 337 GFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACL 396
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F E+ ++ VSWNA+I + ++ L + +L+ P++FT+ V+++ Q
Sbjct: 397 IFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQA 456
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L ++H II+ G +V +L+ Y K G++ +A
Sbjct: 457 LNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEA--------------------- 495
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
K+ ++LE VSWN +I+ + + F M I PDNYT
Sbjct: 496 -----------EKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYT 544
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+ ++L C+ + + LG +H I K ++ SD ++ + L+DMY KCG++ S +F +
Sbjct: 545 YATVLDVCANMATIELGKQIHAQILKLQL-HSDVYIASTLVDMYSKCGNMQDSRLMFEKA 603
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
R+ +TW+A+I A +G ++A+ F EM+ L KP+ I+VL AC H G V +G+
Sbjct: 604 PKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGL 663
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F++M YG++P+M+HY C+VDLL R G + EA K+I +MPF + +IWRT L C+
Sbjct: 664 HYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCK 722
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 163/641 (25%), Positives = 303/641 (47%), Gaps = 54/641 (8%)
Query: 7 VSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQAS 64
++F+ I+ S + ++ MI GF PT + LL C S A
Sbjct: 7 LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKS-----SKMNYAF 61
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
+ + + D L+ Y G + S+F+ MP + +V+WNS++S + +G
Sbjct: 62 KVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRK 121
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ +F + ++ ++F ++ S +D G Q+H L I+ GF+ +++ ++LV+
Sbjct: 122 SIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVD 181
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
MY +C + A ++F+++ R++V W+ +I +++ F + L+L+ M + +Q+T
Sbjct: 182 MYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQST 241
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
+ V SCAGL LG +H +K+ D +G+A +D YAKC+ + A F+ +
Sbjct: 242 YASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLP 301
Query: 305 NKNIVSWNALILGYASKSSPTSIFLLIELLQ---LGYRPNEFTFSHVLRS----SLAFQL 357
N S+NA+I+GYA + + + LQ LG+ +E + S L + +
Sbjct: 302 NPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGF--DEISLSGALTACSVIKRHLEG 359
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+QLH L ++ G L F + AN I +Y +
Sbjct: 360 IQLHGLAVKCG------------------------LGF--------NICVANTILDMYGK 387
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G E + ++ER D VSWN +IAA N + + L LF M + + PD++T+ S+
Sbjct: 388 CGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSV 447
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
+ AC+ L G+ +HG I K+ + D FV + L+DMYGKCG + + KI + ++
Sbjct: 448 VKACAGQQALNYGTEIHGRIIKSG-MGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKT 506
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
++W ++IS ++ A F +M +G PD VL C + + G ++
Sbjct: 507 TVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHA 566
Query: 598 RMNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAEKIITTMP 636
++ + ++ D Y +VD+ + G+++++ + P
Sbjct: 567 QILK---LQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAP 604
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
D N LI Y G++G + +F+ M +R+V++W +L+S NG ++++E F M
Sbjct: 71 DVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMR 130
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMEL-FERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
L D +L AC G+ G+ L + G E ++ +VD+ +
Sbjct: 131 SLKIPHDYATFAVILKAC--SGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKK 188
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEG 650
L +A ++ MP N + W + G
Sbjct: 189 LDDAFRVFREMP-ERNLVCWSAVIAG 213
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 212/667 (31%), Positives = 343/667 (51%), Gaps = 54/667 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLL-SCDSLNPVE-GAQ 60
+N+ +N++IS+YSR + L MF+ MI G P FTF ++ +C ++ V+ G
Sbjct: 146 KNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLA 205
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ V+K L D FV AL+ YG +G + + + VF+ MP ++LV+WNS++ +F +G
Sbjct: 206 VHGLVVKTRLV-EDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNG 264
Query: 121 FVEDCMFLFCELVRS--EVALTE--SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
E+C L +++ E+A T ++ V+ + ++++ G+ +HGL +K D E+
Sbjct: 265 LSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEV 324
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+V N+L++MY +C I A+ +FK ++VVSWNT++G + + + K +L +M
Sbjct: 325 VVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAG 384
Query: 237 --IVFPNQTTFVYVINSCAGLQNSILG--KSIHAKVIKNA-LECDVFVGSALVDFYAKCD 291
+ ++ T + + C + S+L K +H +K + + V +A V YAKC
Sbjct: 385 GGDLRADEVTILNAVPVC--FEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCG 442
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLR 350
+L AH F I +K + SWNALI GY+ S P S+ ++ G P+ FT +L
Sbjct: 443 SLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLS 502
Query: 351 SSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+ + L+L H LIIR E +V SL++ Y G +S A A+
Sbjct: 503 ACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAM------- 555
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
E +VSWN ++ NG + L LF+ M
Sbjct: 556 -------------------------EDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYG 590
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
+ P + +S+ ACS L +L LG HG K ++ + F+ +IDMY K GS+ S
Sbjct: 591 VQPCEISMMSVFGACSLLPSLRLGREAHGYALKC-LLEDNAFIACSVIDMYAKNGSVMES 649
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
K+FN + +R+V +W A++ G++G A+ A++ F EM+ G PD + + VLTAC H
Sbjct: 650 FKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHS 709
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT-TMPFPPNALIWR 645
GLV EG+ ++M +G+ P + HY CV+D+LVR G L EA KI T M P IW
Sbjct: 710 GLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWN 769
Query: 646 TFLEGCQ 652
L C+
Sbjct: 770 FLLSSCR 776
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 147/550 (26%), Positives = 278/550 (50%), Gaps = 46/550 (8%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ V ++ D + T ++ +Y G D+ SVF+ + +K+L WN+++S +
Sbjct: 100 GRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYS 159
Query: 118 KHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ + + +F +++ L ++ +F V+ + +++ G +HGLV+K ++
Sbjct: 160 RNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDV 219
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE---SENFGKALELYLRM 233
V+N+LV+ Y + A ++FK + R++VSWN++I ++ SE L +
Sbjct: 220 FVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEK 279
Query: 234 SVDIVF-PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+I F P+ T V+ CA + +GK +H +K +L+ +V V +AL+D Y+KC
Sbjct: 280 DDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGC 339
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG---YRPNEFTFSHVL 349
+ A + F +NKN+VSWN ++ G+++ F L+ + G R +E T + +
Sbjct: 340 INDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAV 399
Query: 350 ----RSSLAFQLLQLHCLIIRMGY-ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
S+ L +LHC ++ + N E V + + SYAK G +S A
Sbjct: 400 PVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYA------------ 447
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+ I ++T + SWN +I + + D + L+ + M++
Sbjct: 448 ---HRVFCSIRSKT-----------------VNSWNALIGGYSQSSDPRLSLDAYFQMKS 487
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+ + PD +T SLLSACS++ +L LG +HGLI + + D+FV L+ +Y CG +
Sbjct: 488 SGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNR-LERDSFVYISLLSLYIHCGELS 546
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
++ +F+ M D+ +++W +++ NGF +RAL FR+M G +P +++++V AC
Sbjct: 547 TAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACS 606
Query: 585 HGGLVREGME 594
+R G E
Sbjct: 607 LLPSLRLGRE 616
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 144/571 (25%), Positives = 267/571 (46%), Gaps = 65/571 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR----GFEPTQFTFGGLLSCDSLNP- 55
MP+RN+VS+NS+I +S G E+ + M+ + F P T +L + +
Sbjct: 245 MPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDRE 304
Query: 56 ------VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
V G ++ S+ K + V AL+ +Y + GC+++ +F+ K++V+W
Sbjct: 305 IGVGKGVHGLAMKLSLDK------EVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSW 358
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVR--SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLV 167
N++V F G + L +++ ++ E + + + E L +++H
Sbjct: 359 NTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYS 418
Query: 168 IKNGFDY-ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
+K F + LVAN+ V Y +C + A ++F + + V SWN +IG ++S + +
Sbjct: 419 LKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLS 478
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
L+ Y +M + P+ T ++++C+ +++ LGK +H +I+N LE D FV +L+
Sbjct: 479 LDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSL 538
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTF 345
Y C L AH+ F + +K +VSWN ++ GY P ++ L +++ G +P E +
Sbjct: 539 YIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISM 598
Query: 346 SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
V A LL +R+G E + Y L L+ A
Sbjct: 599 MSVFG---ACSLLP----SLRLGREAHGYALKCLLED--------------------NAF 631
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+ ++I +Y + G E+ K+ + L+ + SWN ++ +G KE ++LF+ M+
Sbjct: 632 IACSVI-DMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRT 690
Query: 466 RIYPDNYTFVSLLSACSK-------LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYG 518
PD TF+ +L+AC+ L L +L G+ + + C +IDM
Sbjct: 691 GHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLK-----HYAC--VIDMLV 743
Query: 519 KCGSIGSSVKI-FNEMTDR-NVITWTALISA 547
+ G + ++KI EM++ V W L+S+
Sbjct: 744 RAGKLDEALKIATEEMSEEPGVGIWNFLLSS 774
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 3/170 (1%)
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
A + ++ LG +H L+ ++ +S+D +C +I MY CGS S +F+ + +N+
Sbjct: 90 ASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLF 149
Query: 540 TWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
W A+IS+ N LE F +M G PD V+ AC V+ G+ +
Sbjct: 150 QWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGL 209
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ ++ VE ++ + +V G + +A ++ MP N + W + +
Sbjct: 210 VVKTRLVE-DVFVSNALVSFYGTNGSVSDALRVFKIMP-ERNLVSWNSMI 257
>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
Length = 917
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 202/725 (27%), Positives = 363/725 (50%), Gaps = 82/725 (11%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGAQL 61
++VVS+ S+I Y + +AL +F M G P + T+ +S C + + +G +
Sbjct: 167 QDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLI 226
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ VL++G F +D V A++ +YG+ G L++ VFE MP + V+WN+IV+ +HG
Sbjct: 227 HSQVLEDG-FESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGC 285
Query: 122 VEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ ++ F + ++ + + +F+ +++ S+ L FGE +H +++ G+D L+V N
Sbjct: 286 CVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGN 345
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
++ MY C I +A F + RD +SWNTII A++ +A+ L+ RM + + P
Sbjct: 346 CIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITP 405
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
++ TF+ +I+ A +Q + K + ++++ +E DVF+ SAL++ +++ N+ A F
Sbjct: 406 DKFTFISIIDGTARMQEA---KILSELMVESGVELDVFLVSALINMHSRYGNVREARSLF 462
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ 359
++ +++IV W ++I Y S L++L G N+FT L + + L
Sbjct: 463 DDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALS 522
Query: 360 ----LHCLIIRMGYENYEYVLGSLMTSYAK------------------------------ 385
+H I G+ V +L+ YAK
Sbjct: 523 EGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQCGKNLVSWNTIAAAYVQ 582
Query: 386 ----------------SGLISDALAFVTALNIPRAVVPANIIAGIYNRTG---------- 419
GL +D ++FVT LN + I I TG
Sbjct: 583 RDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSASEGRKIHNILLETGMESDHIVSTA 642
Query: 420 ---------QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+E ++ S++E DIVSWN +IA A +G +E +++F+ M+ + PD
Sbjct: 643 LLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPD 702
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKK---TEIISSDTFVCNMLIDMYGKCGSIGSSV 527
+FV++L+A S +L + L++K + +DT V N ++ M+G+ G + +
Sbjct: 703 KISFVTVLNAFSGSSPSSLKQAR--LVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEAR 760
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+ F + +R+ +W +++A +G ++AL+ FR M+ +PD + L++VL+AC HGG
Sbjct: 761 RAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACSHGG 820
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
L+ EG F M R +G+ +HY CVVDLL R G L +AE+++ MP P + ++W T
Sbjct: 821 LIEEGYHHFTSMGREFGIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLWMTL 880
Query: 648 LEGCQ 652
L C+
Sbjct: 881 LSACK 885
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 168/598 (28%), Positives = 302/598 (50%), Gaps = 48/598 (8%)
Query: 43 TFGGLLS-CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM 101
TF LL C + + + S ++ F D V A + +YG+ GC+++ VSVF+ +
Sbjct: 4 TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSL 63
Query: 102 PRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGE 161
S V+WNS+++ F + G + +F + +A +FV V+ G S DL G+
Sbjct: 64 DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGK 123
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
+HG V++ G + ++V SL+ MY +C + A ++F + ++DVVSW ++I + +
Sbjct: 124 LLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHD 183
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
+ALEL+ RM V PN+ T+ I++CA +++ GK IH++V+++ E DV V
Sbjct: 184 RCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSC 243
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL--GYR 339
A+V+ Y KC +LE A F + + N VSWNA++ + +QL G
Sbjct: 244 AIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGIT 303
Query: 340 PNEFTFSHVLR-----SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
P++ TF +L ++L F L LH I++ GY+ + V +MT Y+ G I +A A
Sbjct: 304 PDKVTFITILNACSSPATLTFGEL-LHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAA 362
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
F + + +ER D +SWN +I+ A G E
Sbjct: 363 FFSTM-------------------------------VER-DAISWNTIISGHAQAGFCDE 390
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
+ LF+ M A I PD +TF+S++ +++ + S L +++ + D F+ + LI
Sbjct: 391 AVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKILSEL--MVESG--VELDVFLVSALI 446
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
+M+ + G++ + +F++M DR+++ WT++IS+ +G + AL R M G +
Sbjct: 447 NMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDF 506
Query: 575 ALIAVLTACRHGGLVREGMELFER-MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
L+ L AC + EG + + R + P + + ++++ + G L+EA+++
Sbjct: 507 TLVTALNACASLTALSEGKLIHAHAIERGFAASPAVG--NALINMYAKCGCLEEADRV 562
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 175/699 (25%), Positives = 339/699 (48%), Gaps = 81/699 (11%)
Query: 7 VSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGAQLQAS 64
VS+NS+++A++R G + A ++F M +G P + TF +L C ++ + G L
Sbjct: 69 VSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGKLLHGF 128
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
VL+ GL + VGT+L+ +YG+ GC+++ VF+ + + +V+W S++ + +H +
Sbjct: 129 VLEAGLE-RNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVE 187
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ LF + S V ++ I ++ + + G+ IH V+++GF+ +++V+ ++VN
Sbjct: 188 ALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVN 247
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD-IVFPNQT 243
MY +C + A ++F+ + + VSWN I+ A + +AL + RM + + P++
Sbjct: 248 MYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDKV 307
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
TF+ ++N+C+ G+ +H +++ + + VG+ ++ Y+ C ++ A FS +
Sbjct: 308 TFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTM 367
Query: 304 SNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ-LH 361
++ +SWN +I G+A ++ L +L G P++FTF ++ + Q + L
Sbjct: 368 VERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKILS 427
Query: 362 CLIIRMGYE----------NYEYVLG---------------------SLMTSYAKSGLIS 390
L++ G E N G S+++SY + G
Sbjct: 428 ELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSD 487
Query: 391 DALA----------------FVTALN------------------IPR--AVVPA--NIIA 412
DAL VTALN I R A PA N +
Sbjct: 488 DALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAVGNALI 547
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G E ++ Q + ++VSWN + AA ++E L+LF+ M+ + D
Sbjct: 548 NMYAKCGCLEEADRVFHQCGK-NLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKV 606
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+FV++L+ CS + + G +H ++ +T + SD V L++MY S+ + +IF+
Sbjct: 607 SFVTVLNGCS---SASEGRKIHNILLETG-MESDHIVSTALLNMYTASKSLDEASRIFSR 662
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR-E 591
M R++++W A+I+ +G ++ A++ F+ M+ G PD+++ + VL A +
Sbjct: 663 MEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLK 722
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
L E++ G E + + +V + R G L EA +
Sbjct: 723 QARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARR 761
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 181/413 (43%), Gaps = 41/413 (9%)
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
TF+ ++ CA G+ +H++V + D V +A + Y KC +E A F +
Sbjct: 4 TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSL 63
Query: 304 SNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ--- 359
+ + VSWN+L+ +A F + + ++L G P+ TF VL A L
Sbjct: 64 DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGK 123
Query: 360 -LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
LH ++ G E V SL+ Y K G +
Sbjct: 124 LLHGFVLEAGLERNVMVGTSLIKMYGKCGCV----------------------------- 154
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
+ ++ +L D+VSW +I + E LELF MR + + P+ T+ + +
Sbjct: 155 ---EDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAI 211
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
SAC+ + ++A G +H + + + SD V +++MYGKCGS+ + ++F M N
Sbjct: 212 SACAHVESMADGKLIHSQVLE-DGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNT 270
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFL-GFKPDRVALIAVLTACRHGGLVREGMELFE 597
++W A+++A +G AL F+ M+ G PD+V I +L AC + G EL
Sbjct: 271 VSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFG-ELLH 329
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G + + +C++ + G + A +TM +A+ W T + G
Sbjct: 330 ECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTM-VERDAISWNTIISG 381
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 131/258 (50%), Gaps = 3/258 (1%)
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
V A R + N +Y + G + V + L+ P VSWN ++AA A +G +++
Sbjct: 28 VEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSLDHPSQVSWNSLLAAFARDGQFQQA 87
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
++F+ M+ + PD TFV++L CS + +L+ G LHG + + + + V LI
Sbjct: 88 FQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGKLLHGFVLEAGL-ERNVMVGTSLIK 146
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MYGKCG + + ++F+++ ++V++WT++I + ALE F M G P+R+
Sbjct: 147 MYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRIT 206
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
++AC H + +G +L G E ++ +V++ + G L++A ++ M
Sbjct: 207 YATAISACAHVESMADG-KLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERM 265
Query: 636 PFPPNALIWRTFLEGCQR 653
P PN + W + C +
Sbjct: 266 PH-PNTVSWNAIVAACTQ 282
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 207/646 (32%), Positives = 332/646 (51%), Gaps = 39/646 (6%)
Query: 15 AYSRCGYVEDALRMFLYMI-NRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVLKNGLF 71
A R DA+ MF+ +I + F FTF ++ SL+ G + V+K GL
Sbjct: 4 AVHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLL 63
Query: 72 CADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCE 131
D FVG AL+ +YG+ G +D V VF MP ++LV+WNSI+S F ++GF +DC + E
Sbjct: 64 L-DVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVE 122
Query: 132 LVRSEVALTE--SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
++ E L ++ V V+ + E D++ G +IHGL +K G ++ V NSLV+MY +C
Sbjct: 123 MMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKC 182
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY--LRMSVDIVFPNQTTFVY 247
+ A+ +F ++ VSWNT+IG L +A L+ ++M DI N+ T +
Sbjct: 183 GYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEV-NEVTVLN 241
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
++ +C + K +H I++ + D V + V YAKC L A F + K
Sbjct: 242 ILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKT 301
Query: 308 IVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIR 366
+ SWNALI G A P ++ L I++ G P+ FT +L +S H +R
Sbjct: 302 VNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASA-------HLKSLR 354
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
G E + +VL + GL D+ ++ L++ Y G+ +
Sbjct: 355 YGKEVHGFVL--------RHGLEIDSFIGISLLSL-------------YIHCGESSSARL 393
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
L +E VSWN +I+ + NG ++ L LF+ + + P + VS+L ACS+
Sbjct: 394 LFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSA 453
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L LG H K ++ D FV IDMY K G I S +F+ + ++++ +W A+I+
Sbjct: 454 LRLGKETHCYALKA-LLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIA 512
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
A G++G + ++E F M +G PD I +LT C H GLV EG++ F M +G+E
Sbjct: 513 AYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIE 572
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
P+++HY CV+D+L R G L +A +++ MP P++ +W + L C+
Sbjct: 573 PKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCR 618
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 289/582 (49%), Gaps = 53/582 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI--NRGFEPTQFTFGGLLS-CDSLNPVE 57
MP RN+VS+NSIIS +S G+ +D M + M+ G P T +L C V+
Sbjct: 92 MPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQ 151
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G ++ +K GL D V +L+ +Y + G L E +F+ RK+ V+WN+++
Sbjct: 152 MGIRIHGLAVKLGL-SEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGL 210
Query: 117 GKHGFVEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
G++ + LF E+ ++ ++ + E + + ++ L +++HG I++GF Y+
Sbjct: 211 CTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYD 270
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
LVAN V Y +C + AE++F +E + V SWN +IG A++ + KAL LY++M+
Sbjct: 271 ELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTY 330
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ P+ T ++ + A L++ GK +H V+++ LE D F+G +L+ Y C
Sbjct: 331 SGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSS 390
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLA 354
A L F + K+ VSWNA+I GY+ P +L +L+ G++P++ VL +
Sbjct: 391 ARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQ 450
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
L R+G E + Y L +L L+ D + ++ +
Sbjct: 451 QSAL-------RLGKETHCYALKAL--------LMEDVFVACSTID-------------M 482
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y ++G E+ + L+ D+ SWN +IAA +GD +E +ELF+ MR PD +TF
Sbjct: 483 YAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTF 542
Query: 475 VSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
+ +L+ CS + G + HG+ K E + C M DM G+ G + ++
Sbjct: 543 IGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLE-----HYACVM--DMLGRAGRLDDAL 595
Query: 528 KIFNEMTDR-NVITWTALIS---ALGLNGFAQRALEKFREME 565
++ +EM ++ + W++L+S G Q EK E+E
Sbjct: 596 RLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELE 637
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 204/665 (30%), Positives = 336/665 (50%), Gaps = 49/665 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
+PD VS++S+++AYS G DAL F M RG +F +L C + + GAQ
Sbjct: 63 IPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKC-APDVRFGAQ 121
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM----PRKSLVTWNSIVSIF 116
+ A + L D FV AL+ +YG G +DE +F++ ++ V+WN+++S +
Sbjct: 122 VHALAVATRL-VHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAY 180
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
K+ D + +F E+V S E F V++ + +DLE G Q+HG V++ G++ ++
Sbjct: 181 VKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDV 240
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
AN+LV+MY + I A +F+ + DVVSWN I + +ALEL L+M
Sbjct: 241 FTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSS 300
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ PN T V+ +CAG LG+ IH ++K + D FV LVD YAK L+ A
Sbjct: 301 GLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDA 360
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ---LGYRPNEFTFSHVLRSSL 353
F + ++++ WNALI G + + L ++ L N T + VL+S+
Sbjct: 361 RKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTA 420
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ + + Q+H L ++G + +V+ L+ SY K
Sbjct: 421 SSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWK------------------------ 456
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
GQ + +K+ + DI+S ++ A + ++ ++LF M + P
Sbjct: 457 --------CGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEP 508
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
D++ SLL+AC+ L G +H LIK+ +SD F N L+ Y KCGSI +
Sbjct: 509 DSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQ--FTSDVFAGNALVYAYAKCGSIEDADM 566
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
F+ + +R +++W+A+I L +G +RAL+ F M G P+ + L +VL+AC H GL
Sbjct: 567 AFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGL 626
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
V + + FE M ++G++ +HY C++D+L R G L++A +++ MPF NA +W L
Sbjct: 627 VDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALL 686
Query: 649 EGCQR 653
G R
Sbjct: 687 -GASR 690
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 159/537 (29%), Positives = 265/537 (49%), Gaps = 50/537 (9%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
GA L + +LK+GL A LL LY R +VF+++P V+W+S+V+ +
Sbjct: 23 GAHLHSHLLKSGLL---AGFSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYS 79
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G D + F + V E + V L D+ FG Q+H L + +++
Sbjct: 80 NNGMPRDALLAFRAMRGRGVPCNEFALPVV---LKCAPDVRFGAQVHALAVATRLVHDVF 136
Query: 178 VANSLVNMYFQCAGIWSAEKMFKD-VEI---RDVVSWNTIIGALAESENFGKALELYLRM 233
VAN+LV +Y + A +MF + V + R+ VSWNT+I A +++ G A+ ++ M
Sbjct: 137 VANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREM 196
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
PN+ F V+N+C G ++ G+ +H V++ E DVF +ALVD Y+K ++
Sbjct: 197 VWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDI 256
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRS- 351
E A F ++ ++VSWNA I G + ++ LL+++ G PN FT S VL++
Sbjct: 257 EMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKAC 316
Query: 352 --SLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ AF L Q+H +++ + E+V L+ YAK G + DA
Sbjct: 317 AGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDAR--------------- 361
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
K+ + R D++ WN +I+ C+H+G + EVL LF MR +
Sbjct: 362 -----------------KVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLD 404
Query: 469 PD--NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
D T S+L + + + +H L +K ++ SD+ V N LID Y KCG + +
Sbjct: 405 LDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLL-SDSHVINGLIDSYWKCGQLDYA 463
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+K+F E ++I+ T +++AL + A++ F +M G +PD L ++L AC
Sbjct: 464 IKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNAC 520
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
+L G+ LH + K+ +++ N L+ +Y +C ++ +F+E+ D ++W++L+
Sbjct: 19 SLFAGAHLHSHLLKSGLLAG---FSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLV 75
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
+A NG + AL FR M G + AL VL
Sbjct: 76 TAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVL 110
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 202/654 (30%), Positives = 342/654 (52%), Gaps = 46/654 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLL-SCDSLNPVE-GA 59
++N+ +N+++S Y R ++A+ FL +I+ F+P FTF L+ +C + G
Sbjct: 171 NKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGK 230
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ +K GL D FVG A++ LYG+ G LDE V +F+ MP ++L++WNS++ F ++
Sbjct: 231 SVHGMAVKMGLI-MDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSEN 289
Query: 120 GFVEDCMFLFCELVRSEVALTE--SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
GF + F L+ S L ++ V ++ S E +++ G IHG+ +K G +EL+
Sbjct: 290 GFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELM 349
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD- 236
V N+L++MY +C + A +F+ +E + VVSWN++IGA + + +L +M ++
Sbjct: 350 VCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEE 409
Query: 237 -IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
++ N+ T + ++ +C + +++H ++++ + + +A + YAKC +L
Sbjct: 410 ELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVF 469
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F ++ K++ SWNA+I G+A P ++ E+ +LG P++F+ +L +
Sbjct: 470 AEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGR 529
Query: 355 FQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
LLQ +H ++R G E +V SL++ Y
Sbjct: 530 LGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCS----------------------- 566
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
Y RT Y ET + + V WN +++ + N E L LF+ M + + PD
Sbjct: 567 -KPFYGRT--YFET------MGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPD 617
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
S+L ACS+L L LG +H K ++ D FV L+DMY K G +G S +IF
Sbjct: 618 EIAIASILGACSQLSALGLGKEVHCFALKNSLME-DNFVACSLMDMYAKSGFLGHSQRIF 676
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
N + + V +W +I+ G++G +A+E F +M+ +PDR + VL AC H GLV
Sbjct: 677 NRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVS 736
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
EG+ +M Y +EPE++HY CV+D+L R G L EA I MP P+A IW
Sbjct: 737 EGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIW 790
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 150/551 (27%), Positives = 261/551 (47%), Gaps = 50/551 (9%)
Query: 47 LLSCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS 105
L C VE G +L + + F D + T L+ +Y G E VF+ + K+
Sbjct: 114 LQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKN 173
Query: 106 LVTWNSIVSIFGKHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIH 164
L WN++VS + ++ ++ + F EL+ +E +F +I + + D+ G+ +H
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVH 233
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
G+ +K G +L V N+++ +Y +C + A ++F + ++++SWN++I +E+ G
Sbjct: 234 GMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSEN---G 290
Query: 225 KALELY-----LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
LE Y L S D + P+ T V ++ C+G N +G IH +K L ++ V
Sbjct: 291 FWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMV 350
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-- 337
+AL+D Y+KC L A + F +I NK++VSWN++I Y+ + F L+ + +
Sbjct: 351 CNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEE 410
Query: 338 -YRPNEFTFSHVLRSSLA----FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
NE T ++L + L L LH +R ++ E + + + +YAK G +
Sbjct: 411 LMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSL--- 467
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
V ++ G+ ++ + SWN VI A NGD
Sbjct: 468 ------------VFAEHVFFGMNTKS-----------------VSSWNAVIGGHAQNGDP 498
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
+ L+ + M I PD+++ VSLL AC +L L G +HG + + + ++FV
Sbjct: 499 IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNG-LEMNSFVAVS 557
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
L+ +Y C F M D+N + W A++S N AL FR+M G +PD
Sbjct: 558 LLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPD 617
Query: 573 RVALIAVLTAC 583
+A+ ++L AC
Sbjct: 618 EIAIASILGAC 628
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/552 (26%), Positives = 254/552 (46%), Gaps = 54/552 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR--GFEPTQFTFGGLLS-CDSLNPVE 57
MP++N++S+NS+I +S G+ +A R F ++ G P T LL C V+
Sbjct: 271 MPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD 330
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G + +K GL + V AL+ +Y + GCL E +F + KS+V+WNS++ +
Sbjct: 331 VGMVIHGMAVKLGLV-HELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAY 389
Query: 117 GKHGFVEDCMFLFCELVRSE--VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ GFV + L ++ E + + E + + ++ E +L +HG +++ F Y
Sbjct: 390 SREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQY 449
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ L+ N+ + Y +C + AE +F + + V SWN +IG A++ + KAL+ Y M+
Sbjct: 450 KELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMT 509
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ P+ + V ++ +C L GK IH V++N LE + FV +L+ Y C
Sbjct: 510 RLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPF 569
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSL 353
F + +KN V WNA++ GY+ P ++ L ++L G P+E + +L +
Sbjct: 570 YGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACS 629
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
L ++HC ++ +V SLM YAKSG + + LN + V N
Sbjct: 630 QLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLN-GKEVASWN 688
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
++ + GQ N+ V+L ++R D P
Sbjct: 689 VMITGFGVHGQGNKAVELFEDMKRSD-------------------------------KQP 717
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS-----DTFVCNMLIDMYGKCGSIG 524
D +TF+ +L AC C+ L S + + + + + + C +IDM G+ G +
Sbjct: 718 DRFTFLGVLQAC---CHAGLVSEGLNYLAQMQTLYKLEPELEHYAC--VIDMLGRAGRLN 772
Query: 525 SSVKIFNEMTDR 536
++ NEM +
Sbjct: 773 EALNFINEMPEE 784
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LL C + N+ +G L ++ + S D + LI MY CG S +F+ + ++
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 537 NVITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACR-----HGGLVR 590
N+ W AL+S N A+ F E+ F+PD ++ AC H G
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
GM + G+ ++ + ++ L + G L EA ++ MP N + W + + G
Sbjct: 233 HGMAV------KMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMP-EQNLISWNSLIRG 285
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 184/600 (30%), Positives = 316/600 (52%), Gaps = 36/600 (6%)
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
V G QL +K G A+ VGTAL+ +Y + G +++ VFE MP++++VTW S+++
Sbjct: 116 VSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTG 175
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ + D M LF + V +F V+ ++++ ++ G ++H +K G
Sbjct: 176 YVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRST 235
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V NSL+NMY +C + A+ +F+ +E RD+VSWNT++ L +E+ +AL+L+
Sbjct: 236 VFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRA 295
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ +Q+T+ VI CA L+ L + +H+ V+K+ D V +A++D Y+KC L+
Sbjct: 296 SMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDD 355
Query: 296 AHLCFSEI-SNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F + ++N+VSW A+I G + P + L + + +PNEFT+S VL +S+
Sbjct: 356 AFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASI 415
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L Q+H II+ Y++ V +L+ SY+K G +AL+
Sbjct: 416 PILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALS------------------- 456
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+ ++ D+V+W+ +++ + GD +F M + P+ +T
Sbjct: 457 -------------IFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFT 503
Query: 474 FVSLLSAC-SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
S + AC S + G H + K + V + L+ MY + GSI S+ +F
Sbjct: 504 ISSAIDACASPTAGIDQGRQFHAISIKYRYQDA-ICVGSALVTMYARKGSIDSARIVFER 562
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
TDR++++W ++IS +G+++ AL+ FR+ME +G + D +AV+ C H GLV+EG
Sbjct: 563 QTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEG 622
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F+ M + + P M+HY C+VDL R G L E +I MPFP A++WRT L C+
Sbjct: 623 QQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACR 682
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 150/561 (26%), Positives = 268/561 (47%), Gaps = 55/561 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPVE-G 58
MP RNVV++ S+++ Y + D + +F M G P FTF +LS S V+ G
Sbjct: 161 MPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLG 220
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS--IF 116
++ A +K G + FV +L+ +Y + G ++E +VF M + +V+WN++++ +
Sbjct: 221 RRVHAQSVKFGCR-STVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLL 279
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+H + + LF + S L++S++ VI +N + L Q+H V+K+GF +
Sbjct: 280 NEHQL--EALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDG 337
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V ++++ Y +C + A +F + ++VVSW +IG ++ + A L+ RM
Sbjct: 338 NVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMRE 397
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D V PN+ T+ V+ + IL IHA++IK + VG+AL+ Y+K N E
Sbjct: 398 DNVKPNEFTYSTVLTASI----PILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEE 453
Query: 296 AHLCFSEISNKNIVSWNALILGYASK---SSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A F I +K++V+W+A++ Y+ T++F I++ G +PNEFT S + +
Sbjct: 454 ALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVF--IKMSMQGMKPNEFTISSAIDAC 511
Query: 353 LAF-----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ Q Q H + I+ Y++ V +L+T YA+ G I A
Sbjct: 512 ASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARI------------- 558
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
++ R Q +R D+VSWN +I+ A +G KE L+ F+ M I
Sbjct: 559 ------VFER------------QTDR-DLVSWNSMISGYAQHGYSKEALDTFRQMETVGI 599
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
D TF++++ C+ + G + IS + ++D+Y + G + ++
Sbjct: 600 EMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETM 659
Query: 528 KIFNEMT-DRNVITWTALISA 547
+ M + W L+ A
Sbjct: 660 NLIEGMPFPAGAMVWRTLLGA 680
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 117/225 (52%), Gaps = 8/225 (3%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNP--VEGAQ 60
++VV++++++S YS+ G + A +F+ M +G +P +FT + +C S +G Q
Sbjct: 464 KDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQ 523
Query: 61 LQASVLKNGLFCADAF-VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
A +K DA VG+AL+ +Y R G +D VFE + LV+WNS++S + +H
Sbjct: 524 FHAISIKYRY--QDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQH 581
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ-IHGLVIKNGFDYELLV 178
G+ ++ + F ++ + + ++F+ VI G ++ ++ G+Q +V+ + +
Sbjct: 582 GYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEH 641
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEI-RDVVSWNTIIGALAESEN 222
+ +V++Y + + + + + + W T++GA +N
Sbjct: 642 YSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKN 686
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 2/174 (1%)
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+L C + + G LH L K ++ V L+DMY KCG + +F M R
Sbjct: 105 VLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKR 164
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
NV+TWT+L++ + F M G P+ +VL+A G V G +
Sbjct: 165 NVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVH 224
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + +G + + ++++ + G ++EA+ + M + + W T + G
Sbjct: 225 AQ-SVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQME-TRDMVSWNTLMAG 276
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 207/658 (31%), Positives = 330/658 (50%), Gaps = 63/658 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MPDRNVVS+ S++ YS G E+ + ++ +SL G Q
Sbjct: 235 MPDRNVVSWTSLMVGYSDKGEPEEVIDIY-------------------KDESL----GRQ 271
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ V+K+GL A V +L+ + G G +D +F+ M + ++WNSI + + ++G
Sbjct: 272 IIGQVVKSGLESKLA-VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 330
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+E+ +F + R + ++ ++ L + ++G IHGLV+K GFD + V N
Sbjct: 331 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 390
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L+ MY A +FK + +D++SWN+++ + AL L M
Sbjct: 391 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 450
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N TF + +C G+ +H V+ + L + +G+ALV Y K + +
Sbjct: 451 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 510
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSL-AFQLL 358
++ +++V+WNALI GYA P + +++ G N T VL + L LL
Sbjct: 511 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 570
Query: 359 Q----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+ LH I+ G+E+ E+V SL+T YAK G +S + ++ G+
Sbjct: 571 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSS---------------QDLFNGL 615
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
NR +I++WN ++AA AH+G +EVL+L MR+ + D ++F
Sbjct: 616 DNR-----------------NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSF 658
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
LSA +KL L G LHGL K D+F+ N DMY KCG IG VK+
Sbjct: 659 SEGLSAAAKLAVLEEGQQLHGLAVKLGF-EHDSFIFNAAADMYSKCGEIGEVVKMLPPSV 717
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+R++ +W LISALG +G+ + F EM +G KP V +++LTAC HGGLV +G+
Sbjct: 718 NRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLA 777
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++ + R +G+EP ++H CV+DLL R G L EAE I+ MP PN L+WR+ L C+
Sbjct: 778 YYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCK 835
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 164/590 (27%), Positives = 288/590 (48%), Gaps = 48/590 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
M +R+ +S+NSI +AY++ G++E++ R+F M E T LLS L V+
Sbjct: 311 MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV--LGHVDHQK 368
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G + V+K G F + V LL +Y G E VF+ MP K L++WNS+++ F
Sbjct: 369 WGRGIHGLVVKMG-FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF 427
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G D + L C ++ S ++ +F + E G +HGLV+ +G Y
Sbjct: 428 VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ 487
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++ N+LV+MY + + + ++ + RDVV+WN +IG AE E+ KAL + M V+
Sbjct: 488 IIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE 547
Query: 237 IVFPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
V N T V V+++C L +L GK +HA ++ E D V ++L+ YAKC +L
Sbjct: 548 GVSSNYITVVSVLSACL-LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 606
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSL 353
+ F+ + N+NI++WNA++ A + L+ ++ G ++F+FS L ++
Sbjct: 607 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 666
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+L QLH L +++G+E+ ++ N
Sbjct: 667 KLAVLEEGQQLHGLAVKLGFEHDSFIF--------------------------------N 694
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
A +Y++ G+ E VK+L + SWNI+I+A +G ++EV F M I P
Sbjct: 695 AAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKP 754
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ TFVSLL+ACS + G + + +I + + C +ID+ G+ G + +
Sbjct: 755 GHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETF 814
Query: 530 FNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
++M + N + W +L+++ ++G R + + L + D V +++
Sbjct: 815 ISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 864
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 174/647 (26%), Positives = 303/647 (46%), Gaps = 70/647 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV--E 57
MP RN VS+N+++S R G + + F M + G +P+ F L++ C + E
Sbjct: 133 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 192
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ V K+GL +D +V TA+L LYG +G + VFE+MP +++V+W S++ +
Sbjct: 193 GVQVHGFVAKSGLL-SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 251
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G E+ + ++ +D G QI G V+K+G + +L
Sbjct: 252 DKGEPEEVIDIY-------------------------KDESLGRQIIGQVVKSGLESKLA 286
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY--LRMSV 235
V NSL++M + A +F + RD +SWN+I A A++ + ++ ++ +R
Sbjct: 287 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 346
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D V N TT +++ + + G+ IH V+K + V V + L+ YA
Sbjct: 347 DEV--NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 404
Query: 296 AHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A+L F ++ K+++SWN+L+ + + S ++ LL ++ G N TF+ L +
Sbjct: 405 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 464
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+ + G I L V+ L + + N + +
Sbjct: 465 --------------------------PDFFEKGRILHGLVVVSGLFYNQII--GNALVSM 496
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y + G+ +E+ ++L Q+ R D+V+WN +I A + D + L F+ MR + + T
Sbjct: 497 YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 556
Query: 475 VSLLSACSKLCN-LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
VS+LSAC + L G LH I SD V N LI MY KCG + SS +FN +
Sbjct: 557 VSVLSACLLPGDLLERGKPLHAYIVSAG-FESDEHVKNSLITMYAKCGDLSSSQDLFNGL 615
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+RN+ITW A+++A +G + L+ +M G D+ + L+A ++ EG
Sbjct: 616 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 675
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
+L + G E + ++ D+ + G + E K++ PP+
Sbjct: 676 QL-HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML-----PPS 716
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/545 (22%), Positives = 234/545 (42%), Gaps = 64/545 (11%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
G +H L +K +L N+L+NMY + + A +F + +R+ VSWNT++ +
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDV 277
+ + +E + +M + P+ ++ +C G S+ G +H V K+ L DV
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTAC-GRSGSMFREGVQVHGFVAKSGLLSDV 209
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG 337
+V +A++ Y + + F E+ ++N+VSW +L++GY+ K P + + + LG
Sbjct: 210 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLG 269
Query: 338 YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMG------YENYEY---------VLGSLMTS 382
+ V++S L +L + LI +G Y NY + S+ +
Sbjct: 270 RQ----IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 325
Query: 383 YAKSGLISDAL--------------------------------------AFVTALNIPRA 404
YA++G I ++ V +
Sbjct: 326 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV 385
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
V N + +Y G+ E + Q+ D++SWN ++A+ ++G + L L M +
Sbjct: 386 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 445
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+ + TF S L+AC G LHGL+ + + + + N L+ MYGK G +
Sbjct: 446 SGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLF-YNQIIGNALVSMYGKIGEMS 504
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC- 583
S ++ +M R+V+ W ALI + +AL F+ M G + + +++VL+AC
Sbjct: 505 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 564
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
G L+ G L + S G E + + ++ + + G L ++ + + N +
Sbjct: 565 LPGDLLERGKPLHAYI-VSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIIT 622
Query: 644 WRTFL 648
W L
Sbjct: 623 WNAML 627
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 4/162 (2%)
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G ++H L K ++ N LI+MY K G + + +F+ M RN ++W ++S +
Sbjct: 91 GRAVHALCVKG-LVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIV 149
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC-RHGGLVREGMELFERMNRSYGVEPE 608
G +E FR+M LG KP + +++TAC R G + REG+++ + +S G+ +
Sbjct: 150 RVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKS-GLLSD 208
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ ++ L YG + + K+ MP N + W + + G
Sbjct: 209 VYVSTAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSLMVG 249
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/660 (29%), Positives = 340/660 (51%), Gaps = 43/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MPD +VVS+N+++S Y + G ++++ +F+ M RG P + TF LL SC +L + G
Sbjct: 151 MPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLG 210
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A +K GL D G+AL+ +YG+ LD+ + F MP ++ V+W + ++
Sbjct: 211 VQVHALAVKTGLEI-DVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIA---- 265
Query: 119 HGFVEDCMF-----LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
G V++ + LF E+ R + +++ S+ + L G Q+H IKN F
Sbjct: 266 -GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFS 324
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ +V ++V++Y + + A + F + V + N ++ L + +A+ L+ M
Sbjct: 325 SDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFM 384
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ + + V ++CA + G+ +H IK+ + D+ V +A++D Y KC L
Sbjct: 385 IRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKAL 444
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A+L F + K+ VSWNA+I +I E+L+ G +P++FT+ VL++
Sbjct: 445 MEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKAC 504
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
A + L+ ++ ++ V+ KSGL SDA A+ +
Sbjct: 505 AALRSLEYGLMV-------HDKVI--------KSGLGSDAFV-------------ASTVV 536
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G +E KL ++ +VSWN +++ + N + +E + F M + PD++
Sbjct: 537 DMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHF 596
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF ++L C+ L + LG +HG I K E++ D ++ + L+DMY KCG + S+ +F +
Sbjct: 597 TFATVLDTCANLATIELGKQIHGQIIKQEMLD-DEYISSTLVDMYAKCGDMPDSLLVFEK 655
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ R+ ++W A+I L+G AL F M+ P+ +AVL AC H GL +G
Sbjct: 656 VEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 715
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M Y +EP+++H+ C+VD+L R +EA K I +MPF +A+IW+T L C+
Sbjct: 716 CRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICK 775
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 163/602 (27%), Positives = 285/602 (47%), Gaps = 42/602 (6%)
Query: 32 MINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCL 91
M+ GF PT F LL + A + + + D +L Y G +
Sbjct: 85 MVVSGFVPTAFVSNCLLQ---MYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDI 141
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
V++F+ MP +V+WN++VS + + G ++ + LF E+ R V+ ++F ++
Sbjct: 142 STAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSC 201
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
S ++L G Q+H L +K G + ++ ++LV+MY +C + A F + R+ VSW
Sbjct: 202 SALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWG 261
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
I ++E + + LEL++ M + +Q ++ SCA + G+ +HA IKN
Sbjct: 262 AAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKN 321
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI 331
D VG+A+VD YAK ++L A F + N + + NA+++G L I
Sbjct: 322 KFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAG------LGI 375
Query: 332 ELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLIS 390
E + L F ++RSS+ F ++ L + E Y G + A KSG
Sbjct: 376 EAMGL--------FQFMIRSSIRFDVVSLSG-VFSACAETKGYFQGQQVHCLAIKSGFDV 426
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
D + N + +Y + E + +++ D VSWN +IAA NG
Sbjct: 427 D-------------ICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNG 473
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
Y + + F M + PD++T+ S+L AC+ L +L G +H + K+ + SD FV
Sbjct: 474 HYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSG-LGSDAFVA 532
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
+ ++DMY KCG I + K+ + + + V++W A++S LN ++ A + F EM +G K
Sbjct: 533 STVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 592
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM--DHY--HCVVDLLVRYGHLK 626
PD VL C + + G ++ ++ ++ EM D Y +VD+ + G +
Sbjct: 593 PDHFTFATVLDTCANLATIELGKQIHGQI-----IKQEMLDDEYISSTLVDMYAKCGDMP 647
Query: 627 EA 628
++
Sbjct: 648 DS 649
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 232/501 (46%), Gaps = 70/501 (13%)
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN---- 222
++ +GF V+N L+ MY +CAG A ++F + RD VSWNT++ A + + +
Sbjct: 85 MVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 144
Query: 223 ---------------------------FGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
F ++++L++ M+ V P++TTF ++ SC+ L
Sbjct: 145 VALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 204
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
+ LG +HA +K LE DV GSALVD Y KC +L+ A F + +N VSW A I
Sbjct: 205 EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAI 264
Query: 316 LG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYE 370
G ++ + L IE+ +LG ++ +++ RS A L QLH I+ +
Sbjct: 265 AGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFS 324
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ V +++ YAK+ ++DA RA G+ N T
Sbjct: 325 SDRVVGTAIVDVYAKANSLTDAR---------RAFF------GLPNHT------------ 357
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+ + N ++ G E + LF++M + I D + + SAC++ G
Sbjct: 358 -----VETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG 412
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+H L K+ D V N ++D+YGKC ++ + IF M ++ ++W A+I+AL
Sbjct: 413 QQVHCLAIKSG-FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 471
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
NG + F EM G KPD +VL AC + G+ + +++ +S G+ +
Sbjct: 472 NGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAF 530
Query: 611 HYHCVVDLLVRYGHLKEAEKI 631
VVD+ + G + EA+K+
Sbjct: 531 VASTVVDMYCKCGIIDEAQKL 551
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
DT N ++ Y G I ++V +F+ M D +V++W AL+S G Q +++ F EM
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G PDR +L +C + G+++ ++ G+E ++ +VD+ + L
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKT-GLEIDVRTGSALVDMYGKCRSL 242
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGC 651
+A MP N + W + GC
Sbjct: 243 DDALCFFYGMP-ERNWVSWGAAIAGC 267
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 209/655 (31%), Positives = 335/655 (51%), Gaps = 37/655 (5%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-----GGLLSCDSLNPVEG 58
R+ +NS+ A + +ALR++ M+ G P TF + +P +G
Sbjct: 78 RSAFLWNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKG 137
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
A+L A+ L+ GL AD F G L+ Y G + VF++MP + +V+WNS+VS
Sbjct: 138 AELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLT 197
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G +ED ++RS V + +S V ++ E+D FG +HGLV+K G + + +
Sbjct: 198 NGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNL 257
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LV+MY + + S+ +F ++ ++ VSWN+ IG A + LE++ MS V
Sbjct: 258 GNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDV 317
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P T ++ + L LGK +H I+ A+E D+F+ + L+D YAK E A
Sbjct: 318 TPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASA 377
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F I +N+VSWNA+I + F L+IE+ + G PN FT ++L +
Sbjct: 378 IFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACS---- 433
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
++MG + + + + + L+SD FV+ N + +Y +
Sbjct: 434 ---RVASVKMGKQIHAWSI--------RRSLMSDL--FVS-----------NALIDVYAK 469
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
GQ N + + E+ D VS+N +I + + E L LF+ MR A I D +F+
Sbjct: 470 CGQLNLARYIFDRSEK-DGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGC 528
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
LSACS L G +HG++ K ++ S F+ N L+D+Y K G + ++ KIFN +T ++
Sbjct: 529 LSACSNLSAFKQGKEIHGVLVK-RLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKD 587
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
V +W +I G++G A E F M+ G + D V+ IAVL+ C HGGLV G + F
Sbjct: 588 VASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFS 647
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+M + ++P+ HY C+VDLL R G L E+ +II MPF N+ +W L C+
Sbjct: 648 QM-IAQNIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSDVWGALLGSCR 701
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 161/585 (27%), Positives = 277/585 (47%), Gaps = 64/585 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP R+VVS+NS++SA G +EDA R + M+ G + +L EG
Sbjct: 180 MPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFG 239
Query: 61 L--QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L VLK GL +G AL+ +YG+ G L+ + VF M K+ V+WNS + F
Sbjct: 240 LCVHGLVLKFGLNSV-VNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAH 298
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
GF ED + +F + +V + ++ L + G+++HG I+ + ++ +
Sbjct: 299 AGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFI 358
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN+L++MY + A +F+++E+R+VVSWN +I L ++ +A L + M +
Sbjct: 359 ANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGE 418
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T V ++ +C+ + + +GK IHA I+ +L D+FV +AL+D YAKC L A
Sbjct: 419 CPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARY 478
Query: 299 CFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS----SL 353
F S K+ VS+N LI+GY+ S+ S+ L ++ G + +F L + S
Sbjct: 479 IFDR-SEKDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSA 537
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q ++H ++++ +++ ++ SL+ Y K G++ A +
Sbjct: 538 FKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTA-------------------SK 578
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
I+NR Q D+ SWN +I +G ELF M+ I D+ +
Sbjct: 579 IFNRITQ-------------KDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVS 625
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM---------LIDMYGKCGSIG 524
++++LS CS GL+ + + S N+ ++D+ G+ G +
Sbjct: 626 YIAVLSVCSH----------GGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLS 675
Query: 525 SSVKIFNEMTDR-NVITWTALISALGLNG---FAQRALEKFREME 565
S +I M R N W AL+ + ++G A+ A E E++
Sbjct: 676 ESAEIIRNMPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELK 720
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/481 (23%), Positives = 228/481 (47%), Gaps = 34/481 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
M ++N VS+NS I ++ G+ ED L MF M P T LL D G
Sbjct: 281 MQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLG 340
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+L ++ + +D F+ L+ +Y + GC ++ ++FE++ +++V+WN++++ +
Sbjct: 341 KELHGYSIRRAVE-SDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQ 399
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + L E+ ++ + V ++ S ++ G+QIH I+ +L V
Sbjct: 400 NGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFV 459
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N+L+++Y +C + A +F E +D VS+NT+I ++S+ ++L L+ +M + +
Sbjct: 460 SNALIDVYAKCGQLNLARYIFDRSE-KDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGI 518
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ +F+ +++C+ L GK IH ++K L+ F+ ++L+D Y K L+ A
Sbjct: 519 EHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASK 578
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F+ I+ K++ SWN +ILGY F L +L+ + + + HV S +A +
Sbjct: 579 IFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLM----KDDGIEYDHV--SYIAVLSV 632
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
H ++ G + + ++ A NI + + + R
Sbjct: 633 CSHGGLVDRGKKYFSQMI---------------------AQNIKPQQMHYACMVDLLGRA 671
Query: 419 GQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
GQ +E+ +++ + R + W ++ +C +GD + L + P+N + +L
Sbjct: 672 GQLSESAEIIRNMPFRANSDVWGALLGSCRIHGDIE--LARLAAEHLFELKPENSGYYTL 729
Query: 478 L 478
L
Sbjct: 730 L 730
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 190/425 (44%), Gaps = 36/425 (8%)
Query: 178 VANSLVNMYFQCAGIWSAEKMFKD--VEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+A +L+ Y I SA + + +R WN++ ALA + +AL +Y RM
Sbjct: 49 LAGALLLSYAALPDIPSAHLILRHHPFRLRSAFLWNSLSRALASAALPCEALRVYNRMVR 108
Query: 236 DIVFPNQTTFVY---VINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCD 291
V P+ TF + + A ++ G +HA ++ L DVF G+ LV FYA C
Sbjct: 109 SGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGLLLADVFAGNTLVTFYAVCG 168
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
A F E+ +++VSWN+L+ S L +L+ R ++RS
Sbjct: 169 RAADARRVFDEMPARDVVSWNSLV----------SALLTNGMLEDAKR----AVVGMMRS 214
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ + L ++ G E E GL L LN V N +
Sbjct: 215 GVPVNVASLVSILPACGTERDEGF-----------GLCVHGLVLKFGLN--SVVNLGNAL 261
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y + G ++ + + ++ + VSWN I AH G +++VLE+F+ M + P +
Sbjct: 262 VDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGS 321
Query: 472 YTFVSLLSACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
T SLL A L LG LHG I++ + SD F+ N L+DMY K G + IF
Sbjct: 322 VTLSSLLPALVDLGYFHLGKELHGYSIRRA--VESDIFIANTLMDMYAKFGCSEKASAIF 379
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ RNV++W A+I+ L NG A EM+ G P+ L+ +L AC V+
Sbjct: 380 ENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVK 439
Query: 591 EGMEL 595
G ++
Sbjct: 440 MGKQI 444
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 199/654 (30%), Positives = 340/654 (51%), Gaps = 46/654 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLL-SCDSLNPVE-GA 59
++N+ +N+++S Y R ++A+ FL +I+ F+P FTF L+ +C + G
Sbjct: 171 NKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGK 230
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ +K GL D FVG A++ LYG+ G LDE V +F+ MP ++L++WNS++ F ++
Sbjct: 231 SVHGMAVKMGLI-MDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSEN 289
Query: 120 GFVEDCMFLFCELVRSEVALTE--SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
GF + F L+ S L ++ V ++ S E +++ G IHG+ +K G +EL+
Sbjct: 290 GFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELM 349
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD- 236
V N+L++MY +C + A +F+ +E + VVSWN++IGA + + +L +M ++
Sbjct: 350 VCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEE 409
Query: 237 -IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
++ N+ T + ++ +C + +++H ++++ + + +A + YAKC +L
Sbjct: 410 ELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVF 469
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F ++ K++ SWNA+I G+A P ++ E+ +LG P++F+ +L +
Sbjct: 470 AEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGR 529
Query: 355 FQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
LLQ +H ++R G E +V SL++ Y
Sbjct: 530 LGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCS----------------------- 566
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
Y RT ++ + V WN +++ + N E L LF+ M + + PD
Sbjct: 567 -KPFYGRT--------YFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPD 617
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
S+L ACS+L L LG +H K ++ D FV L+DMY K G +G S +IF
Sbjct: 618 EIAIASILGACSQLSALGLGKEVHCFALKNSLME-DNFVACSLMDMYAKSGFLGHSQRIF 676
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
N + + V +W +I+ G++G +A+E F +M+ +PDR + VL AC H GLV
Sbjct: 677 NRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVS 736
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
EG+ +M Y +EPE++HY CV+D+L R G L EA I MP P+A IW
Sbjct: 737 EGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIW 790
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 150/551 (27%), Positives = 261/551 (47%), Gaps = 50/551 (9%)
Query: 47 LLSCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS 105
L C VE G +L + + F D + T L+ +Y G E VF+ + K+
Sbjct: 114 LQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKN 173
Query: 106 LVTWNSIVSIFGKHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIH 164
L WN++VS + ++ ++ + F EL+ +E +F +I + + D+ G+ +H
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVH 233
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
G+ +K G +L V N+++ +Y +C + A ++F + ++++SWN++I +E+ G
Sbjct: 234 GMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSEN---G 290
Query: 225 KALELY-----LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
LE Y L S D + P+ T V ++ C+G N +G IH +K L ++ V
Sbjct: 291 FWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMV 350
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-- 337
+AL+D Y+KC L A + F +I NK++VSWN++I Y+ + F L+ + +
Sbjct: 351 CNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEE 410
Query: 338 -YRPNEFTFSHVLRSSLA----FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
NE T ++L + L L LH +R ++ E + + + +YAK G +
Sbjct: 411 LMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSL--- 467
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
V ++ G+ ++ + SWN VI A NGD
Sbjct: 468 ------------VFAEHVFFGMNTKS-----------------VSSWNAVIGGHAQNGDP 498
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
+ L+ + M I PD+++ VSLL AC +L L G +HG + + + ++FV
Sbjct: 499 IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNG-LEMNSFVAVS 557
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
L+ +Y C F M D+N + W A++S N AL FR+M G +PD
Sbjct: 558 LLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPD 617
Query: 573 RVALIAVLTAC 583
+A+ ++L AC
Sbjct: 618 EIAIASILGAC 628
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 144/552 (26%), Positives = 254/552 (46%), Gaps = 54/552 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR--GFEPTQFTFGGLLS-CDSLNPVE 57
MP++N++S+NS+I +S G+ +A R F ++ G P T LL C V+
Sbjct: 271 MPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVD 330
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G + +K GL + V AL+ +Y + GCL E +F + KS+V+WNS++ +
Sbjct: 331 VGMVIHGMAVKLGLV-HELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAY 389
Query: 117 GKHGFVEDCMFLFCELVRSE--VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ GFV + L ++ E + + E + + ++ E +L +HG +++ F Y
Sbjct: 390 SREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQY 449
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ L+ N+ + Y +C + AE +F + + V SWN +IG A++ + KAL+ Y M+
Sbjct: 450 KELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMT 509
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ P+ + V ++ +C L GK IH V++N LE + FV +L+ Y C
Sbjct: 510 RLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPF 569
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSL 353
F + +KN V WNA++ GY+ P ++ L ++L G P+E + +L +
Sbjct: 570 YGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACS 629
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
L ++HC ++ +V SLM YAKSG + + LN + V N
Sbjct: 630 QLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLN-GKEVASWN 688
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
++ + GQ N+ V+L ++R D P
Sbjct: 689 VMITGFGVHGQGNKAVELFEDMKRSD-------------------------------KQP 717
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS-----DTFVCNMLIDMYGKCGSIG 524
D +TF+ +L AC C+ L S + + + + + + C +IDM G+ G +
Sbjct: 718 DRFTFLGVLQAC---CHAGLVSEGLNYLAQMQTLYKLEPELEHYAC--VIDMLGRAGRLN 772
Query: 525 SSVKIFNEMTDR 536
++ NEM +
Sbjct: 773 EALNFINEMPEE 784
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 13/180 (7%)
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LL C + N+ +G L ++ + S D + LI MY CG S +F+ + ++
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 537 NVITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACR-----HGGLVR 590
N+ W AL+S N A+ F E+ F+PD ++ AC H G
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
GM + G+ ++ + ++ L + G L EA ++ MP N + W + + G
Sbjct: 233 HGMAV------KMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMP-EQNLISWNSLIRG 285
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/660 (29%), Positives = 340/660 (51%), Gaps = 43/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MPD +VVS+N+++S Y + G ++++ +F+ M RG P + TF LL SC +L + G
Sbjct: 109 MPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLG 168
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A +K GL D G+AL+ +YG+ LD+ + F MP ++ V+W + ++
Sbjct: 169 VQVHALAVKTGLEI-DVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIA---- 223
Query: 119 HGFVEDCMF-----LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
G V++ + LF E+ R + +++ S+ + L G Q+H IKN F
Sbjct: 224 -GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFS 282
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ +V ++V++Y + + A + F + V + N ++ L + +A+ L+ M
Sbjct: 283 SDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFM 342
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ + + V ++CA + G+ +H IK+ + D+ V +A++D Y KC L
Sbjct: 343 IRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKAL 402
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A+L F + K+ VSWNA+I +I E+L+ G +P++FT+ VL++
Sbjct: 403 MEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKAC 462
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
A + L+ ++ ++ V+ KSGL SDA A+ +
Sbjct: 463 AALRSLEYGLMV-------HDKVI--------KSGLGSDAFV-------------ASTVV 494
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G +E KL ++ +VSWN +++ + N + +E + F M + PD++
Sbjct: 495 DMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHF 554
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF ++L C+ L + LG +HG I K E++ D ++ + L+DMY KCG + S+ +F +
Sbjct: 555 TFATVLDTCANLATIELGKQIHGQIIKQEMLD-DEYISSTLVDMYAKCGDMPDSLLVFEK 613
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ R+ ++W A+I L+G AL F M+ P+ +AVL AC H GL +G
Sbjct: 614 VEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 673
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M Y +EP+++H+ C+VD+L R +EA K I +MPF +A+IW+T L C+
Sbjct: 674 CRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICK 733
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 163/602 (27%), Positives = 285/602 (47%), Gaps = 42/602 (6%)
Query: 32 MINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCL 91
M+ GF PT F LL + A + + + D +L Y G +
Sbjct: 43 MVVSGFVPTAFVSNCLLQ---MYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDI 99
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
V++F+ MP +V+WN++VS + + G ++ + LF E+ R V+ ++F ++
Sbjct: 100 STAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSC 159
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
S ++L G Q+H L +K G + ++ ++LV+MY +C + A F + R+ VSW
Sbjct: 160 SALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWG 219
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
I ++E + + LEL++ M + +Q ++ SCA + G+ +HA IKN
Sbjct: 220 AAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKN 279
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI 331
D VG+A+VD YAK ++L A F + N + + NA+++G L I
Sbjct: 280 KFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAG------LGI 333
Query: 332 ELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLIS 390
E + L F ++RSS+ F ++ L + E Y G + A KSG
Sbjct: 334 EAMGL--------FQFMIRSSIRFDVVSLSG-VFSACAETKGYFQGQQVHCLAIKSGFDV 384
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
D + N + +Y + E + +++ D VSWN +IAA NG
Sbjct: 385 D-------------ICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNG 431
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
Y + + F M + PD++T+ S+L AC+ L +L G +H + K+ + SD FV
Sbjct: 432 HYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSG-LGSDAFVA 490
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
+ ++DMY KCG I + K+ + + + V++W A++S LN ++ A + F EM +G K
Sbjct: 491 STVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 550
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM--DHY--HCVVDLLVRYGHLK 626
PD VL C + + G ++ ++ ++ EM D Y +VD+ + G +
Sbjct: 551 PDHFTFATVLDTCANLATIELGKQIHGQI-----IKQEMLDDEYISSTLVDMYAKCGDMP 605
Query: 627 EA 628
++
Sbjct: 606 DS 607
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 232/501 (46%), Gaps = 70/501 (13%)
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN---- 222
++ +GF V+N L+ MY +CAG A ++F + RD VSWNT++ A + + +
Sbjct: 43 MVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 102
Query: 223 ---------------------------FGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
F ++++L++ M+ V P++TTF ++ SC+ L
Sbjct: 103 VALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 162
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
+ LG +HA +K LE DV GSALVD Y KC +L+ A F + +N VSW A I
Sbjct: 163 EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAI 222
Query: 316 LG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYE 370
G ++ + L IE+ +LG ++ +++ RS A L QLH I+ +
Sbjct: 223 AGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFS 282
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ V +++ YAK+ ++DA RA G+ N T
Sbjct: 283 SDRVVGTAIVDVYAKANSLTDAR---------RAFF------GLPNHT------------ 315
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+ + N ++ G E + LF++M + I D + + SAC++ G
Sbjct: 316 -----VETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG 370
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+H L K+ D V N ++D+YGKC ++ + IF M ++ ++W A+I+AL
Sbjct: 371 QQVHCLAIKSG-FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 429
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
NG + F EM G KPD +VL AC + G+ + +++ +S G+ +
Sbjct: 430 NGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAF 488
Query: 611 HYHCVVDLLVRYGHLKEAEKI 631
VVD+ + G + EA+K+
Sbjct: 489 VASTVVDMYCKCGIIDEAQKL 509
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
DT N ++ Y G I ++V +F+ M D +V++W AL+S G Q +++ F EM
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G PDR +L +C + G+++ ++ G+E ++ +VD+ + L
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKT-GLEIDVRTGSALVDMYGKCRSL 200
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGC 651
+A MP N + W + GC
Sbjct: 201 DDALCFFYGMP-ERNWVSWGAAIAGC 225
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 200/652 (30%), Positives = 331/652 (50%), Gaps = 33/652 (5%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGAQL 61
R+ VS+ +++S Y+R G E+A+ ++ M G PT + +LS + + +G +
Sbjct: 106 RDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLV 165
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A V K G C++ VG AL+ LY R G L VF +MP VT+N+++S + G
Sbjct: 166 HAQVYKQG-SCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGN 224
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E + +F E+ S + ++ ++ DL G+Q+H ++K G + ++ S
Sbjct: 225 GESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGS 284
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+++Y +C I A ++FK + +VV WN ++ A + + K+ +L+ +M V PN
Sbjct: 285 LLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPN 344
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ T+ ++ +C LG+ IH IK E D++V L+D Y+K L+ A
Sbjct: 345 EFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILE 404
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL 360
+ K++VSW ++I GY + +QL G P+ + + + + +
Sbjct: 405 VLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAM-- 462
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
R G + + V SG +D V N + +Y R G+
Sbjct: 463 -----RQGQQIHSRVY--------VSGYSAD-------------VSIWNALVNLYARCGR 496
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
E L +E D ++WN +++ A +G Y+E LE+F M A + + +TFVS +SA
Sbjct: 497 SKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISA 556
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
+ L ++ G +H + KT +S+T V N LI +YGKCGSI + F EM++RN ++
Sbjct: 557 SANLADIKQGKQIHATVIKTGC-TSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVS 615
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W +I++ +G+ AL+ F +M+ G KP+ V I VL AC H GLV EG+ F+ M+
Sbjct: 616 WNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMS 675
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+G+ P DHY CVVD+L R G L A K + MP NA++WRT L C+
Sbjct: 676 SEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACR 727
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 160/562 (28%), Positives = 283/562 (50%), Gaps = 55/562 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
MP + V+FN++IS +++CG E AL +F M G+ P T LL+ C S+ + +G
Sbjct: 204 MPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKG 263
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL + +LK G+ D + +LL LY + G + E + +F+ R ++V WN ++ +G+
Sbjct: 264 KQLHSYLLKAGM-SPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQ 322
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ LFC++V + V E ++ ++ + ++ GEQIH L IK GF+ ++ V
Sbjct: 323 ISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYV 382
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ L++MY + + A ++ + +E +DVVSW ++I + E +ALE + M + +
Sbjct: 383 SGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGI 442
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+P+ I++CAG++ G+ IH++V + DV + +ALV+ YA+C + A
Sbjct: 443 WPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFS 502
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF-- 355
F I +K+ ++WN ++ G+A ++ + I++ Q G + N FTF + +S
Sbjct: 503 LFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLAD 562
Query: 356 --QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q Q+H +I+ G + V +L++ Y K G I DA
Sbjct: 563 IKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDA--------------------- 601
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++ ER + VSWN +I +C+ +G E L+LF M+ + P++ T
Sbjct: 602 ----------KMQFFEMSER-NHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVT 650
Query: 474 FVSLLSACSK--LCNLALG-----SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
F+ +L+ACS L LG SS HG+ + D + C ++D+ G+ G + +
Sbjct: 651 FIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRP-----DHYAC--VVDILGRAGQLDRA 703
Query: 527 VKIFNEM-TDRNVITWTALISA 547
K EM N + W L+SA
Sbjct: 704 RKFVEEMPVSANAMVWRTLLSA 725
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/585 (25%), Positives = 278/585 (47%), Gaps = 40/585 (6%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D G L+ LY + G + VFE + + V+W +++S + ++G E+ + L+ ++
Sbjct: 76 DRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMH 135
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
S V T V+ + E G +H V K G E +V N+L+ +Y + +
Sbjct: 136 CSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLS 195
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
AE++F ++ D V++NT+I A+ N ALE++ M + P+ T ++ +CA
Sbjct: 196 LAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACA 255
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+ + GK +H+ ++K + D + +L+D Y KC + A F N+V WN
Sbjct: 256 SIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNL 315
Query: 314 LILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRS-SLAFQL---LQLHCLIIRMG 368
+++ Y S F L +++ G RPNEFT+ +LR+ + A ++ Q+H L I+ G
Sbjct: 316 MLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTG 375
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
+E+ YV G L+ Y+K G + A ++L
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLDKAR--------------------------------RIL 403
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
LE D+VSW +IA + KE LE FK M+ I+PDN S +SAC+ + +
Sbjct: 404 EVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMR 463
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G +H + + S+D + N L+++Y +CG + +F + ++ ITW ++S
Sbjct: 464 QGQQIHSRVYVSG-YSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGF 522
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
+G + ALE F +M G K + ++ ++A + +++G ++ + ++ G E
Sbjct: 523 AQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSE 581
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ + ++ L + G +++A+ M N + W T + C +
Sbjct: 582 TEVANALISLYGKCGSIEDAKMQFFEMS-ERNHVSWNTIITSCSQ 625
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 139/556 (25%), Positives = 252/556 (45%), Gaps = 41/556 (7%)
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE-QDLEF 159
M R++ + N ++ F H E + LF VR L F + +
Sbjct: 1 MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPL 60
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
IH I G + + N L+++Y + + A ++F+ + RD VSW ++ A
Sbjct: 61 VPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYAR 120
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ +A+ LY +M V P V+++C G+ +HA+V K + V
Sbjct: 121 NGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVV 180
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GY 338
G+AL+ Y + +L A FSE+ + V++N LI +A + S + E ++L G+
Sbjct: 181 GNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGW 240
Query: 339 RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
P+ T + +L + + L QLH +++ G + GSL+ Y K G+I +AL
Sbjct: 241 TPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEAL- 299
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
++ +R ++V WN+++ A D +
Sbjct: 300 -------------------------------EIFKSGDRTNVVLWNLMLVAYGQISDLAK 328
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
+LF M AA + P+ +T+ LL C+ + LG +H L KT SD +V +LI
Sbjct: 329 SFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGF-ESDMYVSGVLI 387
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
DMY K G + + +I + ++V++WT++I+ + F + ALE F++M+ G PD +
Sbjct: 388 DMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNI 447
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
L + ++AC +R+G ++ R+ S G ++ ++ +V+L R G KEA +
Sbjct: 448 GLASAISACAGIKAMRQGQQIHSRVYVS-GYSADVSIWNALVNLYARCGRSKEAFSLFEA 506
Query: 635 MPFPPNALIWRTFLEG 650
+ + + W + G
Sbjct: 507 IEH-KDKITWNGMVSG 521
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/660 (29%), Positives = 340/660 (51%), Gaps = 43/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MPD +VVS+N+++S Y + G ++++ +F+ M RG P + TF LL SC +L + G
Sbjct: 109 MPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLG 168
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A +K GL D G+AL+ +YG+ LD+ + F MP ++ V+W + ++
Sbjct: 169 VQVHALAVKTGLEI-DVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIA---- 223
Query: 119 HGFVEDCMF-----LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
G V++ + LF E+ R + +++ S+ + L G Q+H IKN F
Sbjct: 224 -GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFS 282
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ +V ++V++Y + + A + F + V + N ++ L + +A+ L+ M
Sbjct: 283 SDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFM 342
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ + + V ++CA + G+ +H IK+ + D+ V +A++D Y KC L
Sbjct: 343 IRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKAL 402
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A+L F + K+ VSWNA+I +I E+L+ G +P++FT+ VL++
Sbjct: 403 MEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKAC 462
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
A + L+ ++ ++ V+ KSGL SDA A+ +
Sbjct: 463 AALRSLEYGLMV-------HDKVI--------KSGLGSDAFV-------------ASTVV 494
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G +E KL ++ +VSWN +++ + N + +E + F M + PD++
Sbjct: 495 DMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHF 554
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF ++L C+ L + LG +HG I K E++ D ++ + L+DMY KCG + S+ +F +
Sbjct: 555 TFATVLDTCANLATIELGKQIHGQIIKQEMLD-DEYISSTLVDMYAKCGDMPDSLLVFEK 613
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ R+ ++W A+I L+G AL F M+ P+ +AVL AC H GL +G
Sbjct: 614 VEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 673
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M Y +EP+++H+ C+VD+L R +EA K I +MPF +A+IW+T L C+
Sbjct: 674 CRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICK 733
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 154/560 (27%), Positives = 271/560 (48%), Gaps = 39/560 (6%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D +L Y G + V++F+ MP +V+WN++VS + + G ++ + LF E+
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
R V+ ++F ++ S ++L G Q+H L +K G + ++ ++LV+MY +C +
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
A F + R+ VSW I ++E + + LEL++ M + +Q ++ SCA
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+ G+ +HA IKN D VG+A+VD YAK ++L A F + N + + NA
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321
Query: 314 LILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE 373
+++G L IE + L F ++RSS+ F ++ L + E
Sbjct: 322 MMVGLVRAG------LGIEAMGL--------FQFMIRSSIRFDVVSLSG-VFSACAETKG 366
Query: 374 YVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
Y G + A KSG D + N + +Y + E + ++
Sbjct: 367 YFQGQQVHCLAIKSGFDVD-------------ICVNNAVLDLYGKCKALMEAYLIFQGMK 413
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
+ D VSWN +IAA NG Y + + F M + PD++T+ S+L AC+ L +L G
Sbjct: 414 QKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLM 473
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+H + K+ + SD FV + ++DMY KCG I + K+ + + + V++W A++S LN
Sbjct: 474 VHDKVIKSG-LGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNK 532
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM--D 610
++ A + F EM +G KPD VL C + + G ++ ++ ++ EM D
Sbjct: 533 ESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQI-----IKQEMLDD 587
Query: 611 HY--HCVVDLLVRYGHLKEA 628
Y +VD+ + G + ++
Sbjct: 588 EYISSTLVDMYAKCGDMPDS 607
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 232/501 (46%), Gaps = 70/501 (13%)
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN---- 222
++ +GF V+N L+ MY +CAG A ++F + RD VSWNT++ A + + +
Sbjct: 43 MVVSGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 102
Query: 223 ---------------------------FGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
F ++++L++ M+ V P++TTF ++ SC+ L
Sbjct: 103 VALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 162
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
+ LG +HA +K LE DV GSALVD Y KC +L+ A F + +N VSW A I
Sbjct: 163 EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAI 222
Query: 316 LG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYE 370
G ++ + L IE+ +LG ++ +++ RS A L QLH I+ +
Sbjct: 223 AGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFS 282
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ V +++ YAK+ ++DA RA G+ N T
Sbjct: 283 SDRVVGTAIVDVYAKANSLTDAR---------RAFF------GLPNHT------------ 315
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+ + N ++ G E + LF++M + I D + + SAC++ G
Sbjct: 316 -----VETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG 370
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+H L K+ D V N ++D+YGKC ++ + IF M ++ ++W A+I+AL
Sbjct: 371 QQVHCLAIKSG-FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 429
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
NG + F EM G KPD +VL AC + G+ + +++ +S G+ +
Sbjct: 430 NGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAF 488
Query: 611 HYHCVVDLLVRYGHLKEAEKI 631
VVD+ + G + EA+K+
Sbjct: 489 VASTVVDMYCKCGIIDEAQKL 509
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
DT N ++ Y G I ++V +F+ M D +V++W AL+S G Q +++ F EM
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G PDR +L +C + G+++ ++ G+E ++ +VD+ + L
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKT-GLEIDVRTGSALVDMYGKCRSL 200
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGC 651
+A MP N + W + GC
Sbjct: 201 DDALCFFYGMP-ERNWVSWGAAIAGC 225
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 200/654 (30%), Positives = 340/654 (51%), Gaps = 70/654 (10%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GA 59
PD +VS++++IS Y++ G AL F M G + +FTF +L +C + + G
Sbjct: 120 PD--LVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGK 177
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ V+ +G F D FV L+ +Y + + +F+++P +++V+WN++ S + +
Sbjct: 178 QVHGVVVVSG-FEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQX 236
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
F + + LF E+V S + E S +++ + +D G+ IHG +IK G+D++ A
Sbjct: 237 DFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSA 296
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+LV+MY + + A +F+ ++ D+VSWN +I E+ +ALEL +M
Sbjct: 297 NALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK----- 351
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
+ +H+ ++K +E D+FV LVD Y+KCD LE A +
Sbjct: 352 ----------------------RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMA 389
Query: 300 FSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F+ + K++++WNA+I GY+ ++ L +E+ + G N+ T S +L+S+ Q++
Sbjct: 390 FNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVV 449
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q+H L ++ G+ + YV+ SL+ SY K + DA
Sbjct: 450 HVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDA---------------------- 487
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
++ + D+VS+ +I A A G +E L+LF M+ + PD +
Sbjct: 488 ----------ERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVC 537
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
SLL+AC+ L G LH I K + D F N L++MY KCGSI + + F+E+T
Sbjct: 538 SSLLNACANLSAFEQGKQLHVHILKYGFVL-DIFAGNSLVNMYAKCGSIDDAGRAFSELT 596
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+R +++W+A+I L +G ++AL+ F +M G P+ + L++VL AC H GLV E
Sbjct: 597 ERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKL 656
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
FE M +G +P +HY C++DLL R G + EA +++ MPF NA +W L
Sbjct: 657 YFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALL 710
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 145/559 (25%), Positives = 265/559 (47%), Gaps = 76/559 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSL-NPVEG 58
+P+RNVVS+N++ S Y + + +A+ +F M+ G +P +F+ ++ +C L + G
Sbjct: 218 IPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRG 277
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ ++K G + D F AL+ +Y + G L + +SVFE + + +V+WN++++
Sbjct: 278 KIIHGYLIKLG-YDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
H E + L ++ R Q+H ++K + +L V
Sbjct: 337 HEHHEQALELLGQMKR---------------------------QLHSSLMKMDMESDLFV 369
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ LV+MY +C + A F + +D+++WN II ++ +AL L++ M + +
Sbjct: 370 SVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGI 429
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
NQTT ++ S AGLQ + + +H +K+ D++V ++L+D Y KC ++E A
Sbjct: 430 GFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAER 489
Query: 299 CFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRS----SL 353
F E + ++VS+ ++I YA ++ L +E+ + +P+ F S +L + S
Sbjct: 490 IFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSA 549
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q QLH I++ G+ + SL+ YAK G I DA
Sbjct: 550 FEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDA--------------------- 588
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+ S+L IVSW+ +I A +G ++ L+LF M + P++ T
Sbjct: 589 -----------GRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHIT 637
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIIS----SDTFVCNMLIDMYGKCGSIGSSVKI 529
VS+L AC+ L + L+ E+ + + C +ID+ G+ G I +V++
Sbjct: 638 LVSVLGACNH-AGLVTEAKLY-FESMEELFGFKPMQEHYAC--MIDLLGRAGKINEAVEL 693
Query: 530 FNEMT-DRNVITWTALISA 547
N+M + N W AL+ A
Sbjct: 694 VNKMPFEANASVWGALLGA 712
>gi|147846491|emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
Length = 1007
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 200/614 (32%), Positives = 323/614 (52%), Gaps = 43/614 (7%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L +C SL G + AS+LK G F + G + Y + G LD + VF+ M +
Sbjct: 57 LKACSSLPVRHGKSIHASLLKQG-FDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSRDS 115
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
V+WN ++ G + ++ F + S+ V IH + +E G ++HG
Sbjct: 116 VSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGY 175
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
+I++GF V NSL++MY + AE++F ++ RDV+SW+ +IG ++ A
Sbjct: 176 IIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAXMA 234
Query: 227 LELYLRMSVDIVFP-NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
L+L+L M + + T V V+ +CA + +G+S+H VI L+ D+FVG++++D
Sbjct: 235 LQLFLEMXSNAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIID 294
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFT 344
Y+K D+ E A F+E+ +N VSWN++I G ++ ++ L + + G+R +E T
Sbjct: 295 MYSKXDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVT 354
Query: 345 FSHVLRSSL----AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
++L+S FQ +H ++IR GYE E+V+ SL+ +Y+K LI A
Sbjct: 355 LVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAW------- 407
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
KL +L+ D VSW+ +IA H G E + LF+
Sbjct: 408 -------------------------KLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQ 442
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M A+ P+ T +SLL A S +L HG+ + ++++ V ++DMY KC
Sbjct: 443 EMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIRRG-LAAEVAVGTAILDMYAKC 501
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
G IG S K F+++ ++N+++W A+I+A G+NG A+ AL EM+ G KP+ V ++VL
Sbjct: 502 GEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNXVTTLSVL 561
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP--FP 638
+AC HGGLV EG+ FE M + +GVEP ++HY C+VD+L R G L A +I MP
Sbjct: 562 SACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLXRAGKLNXAMNLIEKMPERMR 621
Query: 639 PNALIWRTFLEGCQ 652
A +W L C+
Sbjct: 622 DGAGLWGALLSACR 635
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 150/563 (26%), Positives = 261/563 (46%), Gaps = 45/563 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
M R+ VS+N +I + G + L F FEP T + +C SL +E G
Sbjct: 110 MRSRDSVSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEG 169
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ ++++G F V +LL +Y + ++ +F++M + +++W+ ++ + +
Sbjct: 170 LKMHGYIIRSG-FLDIPSVQNSLLSMYADND-MERAEELFDEMCERDVISWSVMIGGYVQ 227
Query: 119 HGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + LF E+ + + L + V V+ +N D+ G +HG+VI G DY+L
Sbjct: 228 TGEAXMALQLFLEMXSNAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLF 287
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V NS+++MY + SA K F ++ R+ VSWN+II L +E +AL L+ M
Sbjct: 288 VGNSIIDMYSKXDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAG 347
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
++ T V ++ SC + K IH+ VI+ E + FV ++L+D Y+KCD +E A
Sbjct: 348 FRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAW 407
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS-SLAF 355
F + K+ VSW+A+I G+ P +I L E+ Q +PN T +L + S++
Sbjct: 408 KLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSA 467
Query: 356 QLLQ---LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L + H + IR G + V I
Sbjct: 468 DLKRSKWAHGIXIRRG--------------------------------LAAEVAVGTAIL 495
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G+ + K Q+ +IVSW +IAAC NG ++ L L M+ + P+
Sbjct: 496 DMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNXV 555
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T +S+LSACS + G S + + + + ++DM + G + ++ + +
Sbjct: 556 TTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLXRAGKLNXAMNLIEK 615
Query: 533 MTDR---NVITWTALISALGLNG 552
M +R W AL+SA +G
Sbjct: 616 MPERMRDGAGLWGALLSACRSSG 638
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 121/535 (22%), Positives = 218/535 (40%), Gaps = 58/535 (10%)
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
++ ++ LT+ + V I + + G+ IH ++K GFD NS + Y +
Sbjct: 39 QMKKAGAQLTDPTLVHSILKACSSLPVRHGKSIHASLLKQGFDSLTSTGNSXXDFYMKTG 98
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
+ SA +F + RD VSWN +I L + + V PN +T V I+
Sbjct: 99 ALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVSTLVLAIH 158
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+C L G +H +I++ V ++L+ YA D +E A F E+ ++++S
Sbjct: 159 ACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEELFDEMCERDVIS 217
Query: 311 WNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYE 370
W+ +I GY +Q G + +A QL + +
Sbjct: 218 WSVMIGGY---------------VQTG------------EAXMALQLFLEMXSNAXIELD 250
Query: 371 NYEYVLGSLMTSYAKSGLIS---DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
V S++ + A +G IS V + + N I +Y++ + K
Sbjct: 251 GITMV--SVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHESAFKA 308
Query: 428 LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNL 487
+++ + VSWN +I+ + E L LF M A D T V+LL +C +
Sbjct: 309 FNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDP 368
Query: 488 ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISA 547
+H ++ + + FV N LID Y KC I + K+F+ + ++ ++W+A+I+
Sbjct: 369 FQCKFIHSIVIRWG-YELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAG 427
Query: 548 LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA-----------CRHGGLVREGMELF 596
G A+ F+EM KP+ V ++++L A HG +R G+
Sbjct: 428 FNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIRRGL--- 484
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
E+ ++D+ + G + + K +P N + W + C
Sbjct: 485 ---------AAEVAVGTAILDMYAKCGEIGLSRKAFDQIP-EKNIVSWGAMIAAC 529
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
Query: 434 PDIVSWNIVIAACAHNG--DYKEVLELFKYMRAARIYPDNYTFV-SLLSACSKLCNLALG 490
P + +WN+ I + D E + M+ A + T V S+L ACS L + G
Sbjct: 10 PKLPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSL-PVRHG 68
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
S+H + K + S T N D Y K G++ S++ +F+ M R+ ++W +I
Sbjct: 69 KSIHASLLK-QGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLS 127
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
G + L FR+ + F+P+ L+ + ACR G + EG+++ + RS
Sbjct: 128 RGASDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRS 179
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 192/659 (29%), Positives = 346/659 (52%), Gaps = 48/659 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQL 61
+ V +N ++SAY + G AL ++ M G EP + T+ +L SC ++ + E ++
Sbjct: 107 KAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREI 166
Query: 62 QASVLKNGLFCADAF-VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
AS+++ D + AL+ +YG+ G ++E VF+ + + V+W S++S + +G
Sbjct: 167 HASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNG 226
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F ++ + L+ ++ + +F + + D G+ IH ++ + + + V +
Sbjct: 227 FCDEALDLYQQMDADGIQPDSITFTSALLACTKLVD---GKAIHARIVSSNMESDF-VGS 282
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L+NMY +C + SA + F+ ++ + VV W +++ A ++ ++ +AL+LY RM + V
Sbjct: 283 ALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHA 342
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T+V + +CA L GK+IH++V + + + V +AL+ YAKC L+ A F
Sbjct: 343 DGVTYVTALGACASLGALKEGKAIHSRVFECGFQ-SLVVHTALLTMYAKCGELDAARAVF 401
Query: 301 SEISNK-NIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
+ + K N+ W A+I YA + ++ L +++ G RPNE+TFS+VL + + L
Sbjct: 402 NRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDL 461
Query: 359 QLHCLIIRMGYENYEY-----VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ + I EN E V +L+T YAK G +L + ++ A+
Sbjct: 462 EAG-MKIHGHVENSELASNVAVQNALVTMYAKCG----------SLELAKSAFEAS---- 506
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
R D+VSWN +I A A +G +E L+L++ M + + PD T
Sbjct: 507 ------------------GRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVT 548
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
S LSAC+ +L LG +H + K + S V L++MYG+CG + ++ +F +M
Sbjct: 549 IASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDM 608
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
R+V++WTA+ SA G A + L+ + EM G +P+ + ++L C H GL+ G+
Sbjct: 609 GQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGV 668
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
E F M + V P +H+ C+VDLL R G L++AE ++ +MP+ P+++ W T L C+
Sbjct: 669 ECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCK 727
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 160/605 (26%), Positives = 291/605 (48%), Gaps = 49/605 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEGA 59
+ +R+ VS+ S+IS+Y+ G+ ++AL ++ M G +P TF LL+C L V+G
Sbjct: 207 IKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKL--VDGK 264
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ A ++ + + FVG+AL+ +Y R G + FE + K +V W S+++ + +
Sbjct: 265 AIHARIVSSNM--ESDFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQT 322
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + L+ + V ++V + ++ L+ G+ IH V + GF L+V
Sbjct: 323 CHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQ-SLVVH 381
Query: 180 NSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+L+ MY +C + +A +F V + R+V W +I A A++ + +ALELY +M +
Sbjct: 382 TALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGT 441
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+ TF V+ +C+ + G IH V + L +V V +ALV YAKC +LE A
Sbjct: 442 RPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKS 501
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F K++VSWNA+I YA ++ L + G P+E T + L +
Sbjct: 502 AFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGS 561
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
LQL G E + VL + +F ++L + A+V +Y R
Sbjct: 562 LQL-------GREIHSRVLKN--------------QSFRSSLMVQTALV------NMYGR 594
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G+ + + + D++SW + +A A G +VL+L+ M I P+ TF S+
Sbjct: 595 CGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTSI 654
Query: 478 LSACSKLCNLALG-SSLHGLIKKTEIIS-SDTFVCNMLIDMYGKCGSIGSSVKIFNEMT- 534
L CS LA G + + E++ + F+C ++D+ G+ G + + + M
Sbjct: 655 LVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLC--MVDLLGRSGRLRDAEALVESMPY 712
Query: 535 DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFKPDRVALIAVLTAC-RHGGLVR 590
+ + W ++ + + A+RA + +E++ P+ +L ++L++ GL +
Sbjct: 713 QPDSVAWLTVLGSCKTHSDADTAKRAARRVKELD-----PENTSLYSLLSSIFTAAGLPQ 767
Query: 591 EGMEL 595
E +E+
Sbjct: 768 EALEV 772
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 210/452 (46%), Gaps = 41/452 (9%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKD-VEIRDVVSWNTIIG 215
L G+ +H +++ G + N L+ MY C I A F++ I+ V +N ++
Sbjct: 58 LAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIKAVACYNQMLS 117
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK--NAL 273
A ++ + +ALELY RM + P++ T+ V+ SC+ + + + IHA +I+ +
Sbjct: 118 AYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIEAPQII 177
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIE 332
++ + +ALV+ Y KC ++E A F I N++ VSW ++I YA+ ++ L +
Sbjct: 178 RDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQ 237
Query: 333 LLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTS-YAKSGLISD 391
+ G +P+ TF+ L L C + G + ++ S M S + S LI+
Sbjct: 238 MDADGIQPDSITFTSAL----------LACTKLVDGKAIHARIVSSNMESDFVGSALIN- 286
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
+Y R G + + +++ +V W ++ A
Sbjct: 287 ----------------------MYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCH 324
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
Y+E L+L+ M ++ D T+V+ L AC+ L L G ++H + + S V
Sbjct: 325 YREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQS--LVVHT 382
Query: 512 MLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
L+ MY KCG + ++ +FN + RNV WTA+ISA G Q ALE + +M G +
Sbjct: 383 ALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTR 442
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRS 602
P+ VL AC G + GM++ + S
Sbjct: 443 PNEYTFSNVLAACSSSGDLEAGMKIHGHVENS 474
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 199/659 (30%), Positives = 343/659 (52%), Gaps = 39/659 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+R++VS+N++IS Y C ++A+ +F+ M G P T LL +C + + G
Sbjct: 121 MPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLG 180
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS--VFEDMPRKSLVTWNSIVSIF 116
++ L+NGLF DA+VGTAL+G Y R D V+S VF M +++V+WN+I++ F
Sbjct: 181 QEIHGYCLRNGLFDMDAYVGTALVGFYMR---FDAVLSHRVFSLMLVRNIVSWNAIITGF 237
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G + L+ ++ + + + VI + L G Q+H L IK +L
Sbjct: 238 LNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDL 297
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ N+L+NMY + S+ +F V D WN++I + +A+ L+++M ++
Sbjct: 298 FILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLE 357
Query: 237 IVFPNQTTFVYVINSCAGLQN-SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ + T +++ C L + SI G+ +HA +K+ +E D ++G+AL+ Y K + +
Sbjct: 358 RIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITA 417
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTF-SHVLRSSLA 354
A F ++ +++SWN +I +A F L ++ +E F S+ + S LA
Sbjct: 418 AQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMC----ESEIKFNSYTIVSLLA 473
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
F C + + V G + +A I + L T+LN + +
Sbjct: 474 F------C------KDGSDLVFGRSIHGFA----IKNGLEINTSLNTS--------LTEM 509
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y G + ++ + D+VSWN +I++ N + + L LF +M + + P++ T
Sbjct: 510 YINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHM-ISELEPNSVTI 568
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEI-ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+++L++C++L +L LG LH + E+ + D + N I MY +CG + + KIF +
Sbjct: 569 INILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTL 628
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
R++++W A+I+ G++G + A F +M GFKP+ V+ +VL+AC H GL G+
Sbjct: 629 QTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGL 688
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+LF M R +G+ P++ HY C+VDLL R GH EA I +MP P+A IWR L CQ
Sbjct: 689 QLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQ 747
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 171/650 (26%), Positives = 299/650 (46%), Gaps = 43/650 (6%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQASVLK 67
+NSII +++ L + M + G P T +L +C LN + S ++
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87
Query: 68 NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMF 127
D VGTAL+ Y + G + E VF +MP + LV+WN+++S + ++ +
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147
Query: 128 LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELLVANSLVNMY 186
LF E+ ++ + + V ++ +L G++IHG ++NG FD + V +LV Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+ + S ++F + +R++VSWN II + KAL+LY M ++ + + T +
Sbjct: 208 MRFDAVLS-HRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTML 266
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
VI +CA LG +H IK L D+F+ +AL++ Y+ +LE + F+ +
Sbjct: 267 VVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTS 326
Query: 307 NIVSWNALI---LGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCL 363
+ WN++I +G+ + ++F+ + L R E + + SL L
Sbjct: 327 DAALWNSMISSYIGFGFHAEAIALFIKMRL----ERIKEDVRTIAIMLSLCNDL------ 376
Query: 364 IIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
N + G + ++A KSG+ DA N + +Y + Q
Sbjct: 377 -------NDGSIWGRGLHAHAMKSGIELDAYL-------------GNALLSMYVKHNQIT 416
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
+ ++ D++SWN +I+A A + + ELF M + I ++YT VSLL+ C
Sbjct: 417 AAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCK 476
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
+L G S+HG K + +T + L +MY CG ++ +F R++++W
Sbjct: 477 DGSDLVFGRSIHGFAIKNG-LEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWN 535
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
+LIS+ N A +AL F M +P+ V +I +LT+C + G L R
Sbjct: 536 SLISSYIKNDNAGKALLLFNHM-ISELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRR 594
Query: 603 YGVEPEMDH--YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
V EMD + + + R G L+ AEKI T+ + + W + G
Sbjct: 595 E-VSLEMDASLANAFITMYARCGKLQYAEKIFCTLQ-TRSIVSWNAMITG 642
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 146/582 (25%), Positives = 262/582 (45%), Gaps = 52/582 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
RN+VS+N+II+ + G AL+++ M+ G + T ++ +C + G QL
Sbjct: 225 RNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQL 284
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+K L D F+ ALL +Y +G L+ ++F +P WNS++S + GF
Sbjct: 285 HQLAIKFNLI-NDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGF 343
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLE--FGEQIHGLVIKNGFDYELLVA 179
+ + LF ++ R E + + ++ L N+ + +G +H +K+G + + +
Sbjct: 344 HAEAIALFIKM-RLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLG 402
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L++MY + I +A+ +F+ + DV+SWNT+I A A+S KA EL+L M +
Sbjct: 403 NALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIK 462
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
N T V ++ C + + G+SIH IKN LE + + ++L + Y C + A
Sbjct: 463 FNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNM 522
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
F+ +++VSWN+LI Y + LL + PN T ++L S L
Sbjct: 523 FTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHLP 582
Query: 360 L----HCLIIR--MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L H R + E + + +T YA+ G + A L R++V N +
Sbjct: 583 LGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQ-TRSIVSWNAMIT 641
Query: 414 IYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFK--------- 460
Y G+ + +Q+ +P+ VS+ V++AC+H+G L+LF
Sbjct: 642 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIA 701
Query: 461 ------------------------YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
++ + I PD + +LLS+C N L ++ G
Sbjct: 702 PQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGK 761
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
+ + E + F+ +L ++Y G V+I + +R +
Sbjct: 762 LVELEPSNPGNFI--LLSNIYAAAGLWSEVVQIRKWLRERGL 801
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 199/659 (30%), Positives = 343/659 (52%), Gaps = 39/659 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+R++VS+N++IS Y C ++A+ +F+ M G P T LL +C + + G
Sbjct: 121 MPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLG 180
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS--VFEDMPRKSLVTWNSIVSIF 116
++ L+NGLF DA+VGTAL+G Y R D V+S VF M +++V+WN+I++ F
Sbjct: 181 QEIHGYCLRNGLFDMDAYVGTALVGFYMR---FDAVLSHRVFSLMLVRNIVSWNAIITGF 237
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G + L+ ++ + + + VI + L G Q+H L IK +L
Sbjct: 238 LNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDL 297
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ N+L+NMY + S+ +F V D WN++I + +A+ L+++M ++
Sbjct: 298 FILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLE 357
Query: 237 IVFPNQTTFVYVINSCAGLQN-SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ + T +++ C L + SI G+ +HA +K+ +E D ++G+AL+ Y K + +
Sbjct: 358 RIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITA 417
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTF-SHVLRSSLA 354
A F ++ +++SWN +I +A F L ++ +E F S+ + S LA
Sbjct: 418 AQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMC----ESEIKFNSYTIVSLLA 473
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
F C + + V G + +A I + L T+LN + +
Sbjct: 474 F------C------KDGSDLVFGRSIHGFA----IKNGLEINTSLNTS--------LTEM 509
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y G + ++ + D+VSWN +I++ N + + L LF +M + + P++ T
Sbjct: 510 YINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHM-ISELEPNSVTI 568
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEI-ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+++L++C++L +L LG LH + E+ + D + N I MY +CG + + KIF +
Sbjct: 569 INILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTL 628
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
R++++W A+I+ G++G + A F +M GFKP+ V+ +VL+AC H GL G+
Sbjct: 629 QTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGL 688
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+LF M R +G+ P++ HY C+VDLL R GH EA I +MP P+A IWR L CQ
Sbjct: 689 QLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQ 747
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 171/650 (26%), Positives = 299/650 (46%), Gaps = 43/650 (6%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQASVLK 67
+NSII +++ L + M + G P T +L +C LN + S ++
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87
Query: 68 NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMF 127
D VGTAL+ Y + G + E VF +MP + LV+WN+++S + ++ +
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147
Query: 128 LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELLVANSLVNMY 186
LF E+ ++ + + V ++ +L G++IHG ++NG FD + V +LV Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+ + S ++F + +R++VSWN II + KAL+LY M ++ + + T +
Sbjct: 208 MRFDAVLS-HRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTML 266
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
VI +CA LG +H IK L D+F+ +AL++ Y+ +LE + F+ +
Sbjct: 267 VVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTS 326
Query: 307 NIVSWNALI---LGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCL 363
+ WN++I +G+ + ++F+ + L R E + + SL L
Sbjct: 327 DAALWNSMISSYIGFGFHAEAIALFIKMRL----ERIKEDVRTIAIMLSLCNDL------ 376
Query: 364 IIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
N + G + ++A KSG+ DA N + +Y + Q
Sbjct: 377 -------NDGSIWGRGLHAHAMKSGIELDAYL-------------GNALLSMYVKHNQIT 416
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
+ ++ D++SWN +I+A A + + ELF M + I ++YT VSLL+ C
Sbjct: 417 AAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCK 476
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
+L G S+HG K + +T + L +MY CG ++ +F R++++W
Sbjct: 477 DGSDLVFGRSIHGFAIKNG-LEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWN 535
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
+LIS+ N A +AL F M +P+ V +I +LT+C + G L R
Sbjct: 536 SLISSYIKNDNAGKALLLFNHM-ISELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRR 594
Query: 603 YGVEPEMDH--YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
V EMD + + + R G L+ AEKI T+ + + W + G
Sbjct: 595 E-VSLEMDASLANAFITMYARCGKLQYAEKIFCTLQ-TRSIVSWNAMITG 642
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 146/582 (25%), Positives = 262/582 (45%), Gaps = 52/582 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
RN+VS+N+II+ + G AL+++ M+ G + T ++ +C + G QL
Sbjct: 225 RNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQL 284
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+K L D F+ ALL +Y +G L+ ++F +P WNS++S + GF
Sbjct: 285 HQLAIKFNLI-NDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGF 343
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLE--FGEQIHGLVIKNGFDYELLVA 179
+ + LF ++ R E + + ++ L N+ + +G +H +K+G + + +
Sbjct: 344 HAEAIALFIKM-RLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLG 402
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L++MY + I +A+ +F+ + DV+SWNT+I A A+S KA EL+L M +
Sbjct: 403 NALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIK 462
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
N T V ++ C + + G+SIH IKN LE + + ++L + Y C + A
Sbjct: 463 FNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNM 522
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
F+ +++VSWN+LI Y + LL + PN T ++L S L
Sbjct: 523 FTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISELEPNSVTIINILTSCTQLAHLP 582
Query: 360 L----HCLIIR--MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L H R + E + + +T YA+ G + A L R++V N +
Sbjct: 583 LGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQ-TRSIVSWNAMIT 641
Query: 414 IYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFK--------- 460
Y G+ + +Q+ +P+ VS+ V++AC+H+G L+LF
Sbjct: 642 GYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIA 701
Query: 461 ------------------------YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
++ + I PD + +LLS+C N L ++ G
Sbjct: 702 PQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGK 761
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
+ + E + F+ +L ++Y G V+I + +R +
Sbjct: 762 LVELEPSNPGNFI--LLSNIYAAAGLWSEVVQIRKWLRERGL 801
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 189/611 (30%), Positives = 319/611 (52%), Gaps = 40/611 (6%)
Query: 49 SCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV 107
+C SL +E G ++ +L + D + +L +YG+ G L E ++F+ MP K++V
Sbjct: 107 ACSSLRSLEHGRKIHRHMLTCN-YQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVV 165
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLV 167
+W S++S + ++G ++ + L+ +++RS +F ++ S D + Q+H V
Sbjct: 166 SWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHV 225
Query: 168 IKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKAL 227
+K+ F +L+ N+L++MY + + + A +F + I+D++SW ++I ++ +AL
Sbjct: 226 LKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEAL 285
Query: 228 ELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
+ M S + PN+ F ++C+ L G+ IH IK L D+F G +L D
Sbjct: 286 CHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDM 345
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTF 345
YAKC LE A F I ++V+WNA+I G+AS S + S ++ G PN+ T
Sbjct: 346 YAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTV 405
Query: 346 SHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
+L + +Q+H I++MG+ V SL++ Y+K ++DAL
Sbjct: 406 LSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQ------- 458
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
++ G + DIVSWN ++ AC EVL L K
Sbjct: 459 ------------VFEDIGN------------KADIVSWNTLLTACLQQNQAGEVLRLTKL 494
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M A+RI PD+ T ++L + ++ + +GS +H I K+ + + D V N LI+MY KCG
Sbjct: 495 MFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGL-NLDISVSNALINMYTKCG 553
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
S+ + K+F+ + + ++I+W++LI G + A E FR M LG KP+ + + +LT
Sbjct: 554 SLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILT 613
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC H G+V EG++L+ M Y + P +H C+VDLL R G L AE I MPF P+
Sbjct: 614 ACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDV 673
Query: 642 LIWRTFLEGCQ 652
++W+T L C+
Sbjct: 674 VVWKTLLAACK 684
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 168/593 (28%), Positives = 289/593 (48%), Gaps = 51/593 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP +NVVS+ S+IS YSR G ++A+ +++ M+ G P FTFG ++ SC L+ + A
Sbjct: 159 MPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLA 218
Query: 60 -QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A VLK+ F AD AL+ +Y + + + ++VF + K L++W S+++ F +
Sbjct: 219 RQLHAHVLKSE-FGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQ 277
Query: 119 HGFVEDCMFLFCELVRSEV-ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G+ + + F E++ V E F S + + G QIHGL IK G +L
Sbjct: 278 LGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLF 337
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
SL +MY +C + SA +F +E D+V+WN II A N ++ + +M
Sbjct: 338 AGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTG 397
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ PN T + ++ +C+ G +H+ ++K D+ V ++L+ Y+KC NL A
Sbjct: 398 LVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDAL 457
Query: 298 LCFSEISNK-NIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSS--- 352
F +I NK +IVSWN L+ ++ + L +L+ +P+ T ++VL SS
Sbjct: 458 QVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQI 517
Query: 353 LAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
++++ Q+HC I++ G LN+ +V +N +
Sbjct: 518 ASYEVGSQIHCFIMKSG------------------------------LNLDISV--SNAL 545
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y + G K+ + PDI+SW+ +I A G KE ELF+ MR + P+
Sbjct: 546 INMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNE 605
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TFV +L+ACS + + G L+ +++ IS C+ ++D+ + G + +
Sbjct: 606 ITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIK 665
Query: 532 EMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFKPDRVALIAVL 580
+M +V+ W L++A ++G +RA E L P A + +L
Sbjct: 666 QMPFVPDVVVWKTLLAACKVHGNLEVGKRAAE-----NVLKIDPSNSAAVVML 713
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 137/525 (26%), Positives = 247/525 (47%), Gaps = 46/525 (8%)
Query: 135 SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
S L ++ +I+ S+ + LE G +IH ++ + ++++ N +++MY +C +
Sbjct: 92 SSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKE 151
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A MF + +++VVSW ++I + A+ LY++M P+ TF ++ SC+G
Sbjct: 152 ARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSG 211
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
L + L + +HA V+K+ D+ +AL+ Y K + A FS I K+++SW ++
Sbjct: 212 LDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSM 271
Query: 315 ILGYASKSSPTSIFLLIE--LLQLGYRPNEFTFSHVLRSSLAFQLL------QLHCLIIR 366
I G++ L Q Y+PNEF F S +LL Q+H L I+
Sbjct: 272 IAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAF--SACSKLLEPDCGRQIHGLCIK 329
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
G + + SL YAK G + A RT Y+
Sbjct: 330 FGLGSDLFAGCSLCDMYAKCGFLESA------------------------RTVFYH---- 361
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+E+PD+V+WN +IA A + KE F MR + P++ T +SLL ACS+
Sbjct: 362 ----IEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVM 417
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALI 545
L G +H I K + D VCN L+ MY KC ++ ++++F ++ ++ ++++W L+
Sbjct: 418 LNHGIQVHSYIVKMG-FNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLL 476
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
+A A L + M KPD V L VL + G ++ + +S G+
Sbjct: 477 TACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKS-GL 535
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++ + ++++ + G L+ A K+ ++ P+ + W + + G
Sbjct: 536 NLDISVSNALINMYTKCGSLECARKMFDSIG-NPDIISWSSLIVG 579
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/611 (30%), Positives = 319/611 (52%), Gaps = 40/611 (6%)
Query: 49 SCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV 107
+C SL +E G ++ +L + D + +L +YG+ G L E ++F+ MP K++V
Sbjct: 107 ACSSLRSLEHGRKIHRHMLTCN-YQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVV 165
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLV 167
+W S++S + ++G ++ + L+ +++RS +F ++ S D + Q+H V
Sbjct: 166 SWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHV 225
Query: 168 IKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKAL 227
+K+ F +L+ N+L++MY + + + A +F + I+D++SW ++I ++ +AL
Sbjct: 226 LKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEAL 285
Query: 228 ELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
+ M S + PN+ F ++C+ L G+ IH IK L D+F G +L D
Sbjct: 286 CHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDM 345
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTF 345
YAKC LE A F I ++V+WNA+I G+AS S + S ++ G PN+ T
Sbjct: 346 YAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTV 405
Query: 346 SHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
+L + +Q+H I++MG+ V SL++ Y+K ++DAL
Sbjct: 406 LSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQ------- 458
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
++ G + DIVSWN ++ AC EVL L K
Sbjct: 459 ------------VFEDIGN------------KADIVSWNTLLTACLQQNQAGEVLRLTKL 494
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M A+RI PD+ T ++L + ++ + +GS +H I K+ + + D V N LI+MY KCG
Sbjct: 495 MFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGL-NLDISVSNALINMYTKCG 553
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
S+ + K+F+ + + ++I+W++LI G + A E FR M LG KP+ + + +LT
Sbjct: 554 SLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILT 613
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC H G+V EG++L+ M Y + P +H C+VDLL R G L AE I MPF P+
Sbjct: 614 ACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDV 673
Query: 642 LIWRTFLEGCQ 652
++W+T L C+
Sbjct: 674 VVWKTLLAACK 684
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 168/593 (28%), Positives = 289/593 (48%), Gaps = 51/593 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP +NVVS+ S+IS YSR G ++A+ +++ M+ G P FTFG ++ SC L+ + A
Sbjct: 159 MPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLA 218
Query: 60 -QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A VLK+ F AD AL+ +Y + + + ++VF + K L++W S+++ F +
Sbjct: 219 RQLHAHVLKSE-FGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQ 277
Query: 119 HGFVEDCMFLFCELVRSEV-ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G+ + + F E++ V E F S + + G QIHGL IK G +L
Sbjct: 278 LGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLF 337
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
SL +MY +C + SA +F +E D+V+WN II A N ++ + +M
Sbjct: 338 AGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTG 397
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ PN T + ++ +C+ G +H+ ++K D+ V ++L+ Y+KC NL A
Sbjct: 398 LVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDAL 457
Query: 298 LCFSEISNK-NIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSS--- 352
F +I NK +IVSWN L+ ++ + L +L+ +P+ T ++VL SS
Sbjct: 458 QVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQI 517
Query: 353 LAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
++++ Q+HC I++ G LN+ +V +N +
Sbjct: 518 ASYEVGSQIHCFIMKSG------------------------------LNLDISV--SNAL 545
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y + G K+ + PDI+SW+ +I A G KE ELF+ MR + P+
Sbjct: 546 INMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNE 605
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TFV +L+ACS + + G L+ +++ IS C+ ++D+ + G + +
Sbjct: 606 ITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIR 665
Query: 532 EMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFKPDRVALIAVL 580
+M +V+ W L++A ++G +RA E L P A + +L
Sbjct: 666 QMPFVPDVVVWKTLLAACKVHGNLEVGKRAAE-----NVLKIDPSNSAAVVML 713
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 137/525 (26%), Positives = 247/525 (47%), Gaps = 46/525 (8%)
Query: 135 SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
S L ++ +I+ S+ + LE G +IH ++ + ++++ N +++MY +C +
Sbjct: 92 SSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKE 151
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A MF + +++VVSW ++I + A+ LY++M P+ TF ++ SC+G
Sbjct: 152 ARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSG 211
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
L + L + +HA V+K+ D+ +AL+ Y K + A FS I K+++SW ++
Sbjct: 212 LDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSM 271
Query: 315 ILGYASKSSPTSIFLLIE--LLQLGYRPNEFTFSHVLRSSLAFQLL------QLHCLIIR 366
I G++ L Q Y+PNEF F S +LL Q+H L I+
Sbjct: 272 IAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAF--SACSKLLEPDCGRQIHGLCIK 329
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
G + + SL YAK G + A RT Y+
Sbjct: 330 FGLGSDLFAGCSLCDMYAKCGFLESA------------------------RTVFYH---- 361
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+E+PD+V+WN +IA A + KE F MR + P++ T +SLL ACS+
Sbjct: 362 ----IEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVM 417
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALI 545
L G +H I K + D VCN L+ MY KC ++ ++++F ++ ++ ++++W L+
Sbjct: 418 LNHGIQVHSYIVKMG-FNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLL 476
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
+A A L + M KPD V L VL + G ++ + +S G+
Sbjct: 477 TACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKS-GL 535
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++ + ++++ + G L+ A K+ ++ P+ + W + + G
Sbjct: 536 NLDISVSNALINMYTKCGSLECARKMFDSIG-NPDIISWSSLIVG 579
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/627 (30%), Positives = 332/627 (52%), Gaps = 18/627 (2%)
Query: 38 EPTQFTFGGLL-SCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS 96
+P TF +L SC S V + ++ F D VG AL+ +YG+ L + S
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 97 VFEDMP--RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE 154
VFE M ++++V+WN++++ + ++G + + L+ + + +FV V+ S+
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
L G +IH V +G D +AN+LV MY + + A++MF+ ++ RD SWN +I
Sbjct: 123 --LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
A ++S ++ AL ++ M D+ PN TT++ VI+ + + G+ IHA+++ N +
Sbjct: 181 LAHSQSGDWSGALRIFKEMKCDMK-PNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
D+ V +AL++ Y KC + A F ++ +++VSWN +I Y L + L
Sbjct: 240 SDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKL 299
Query: 335 QL-GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
+ G++ + TF +L + + + L +H I+ G ++ V +L+ YAK G +
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSL 359
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTG---QYNETVKLLSQLERPDIVSWNIVIAAC 446
+A A+ AV + +I G Y G + K+ +L D + WN +I
Sbjct: 360 EEARKVFNAMKNRDAVAWSTLI-GAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTY 418
Query: 447 AHNGDYKEVLELFKYMR-AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
NG +++F+ M AA + PD TF+++L AC+ L L+ +LH I ++E+ S
Sbjct: 419 VQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESEL-ES 477
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
+ V N LI+MY +CGS+ + ++F ++ V++WTA+++A G AL+ F+EM+
Sbjct: 478 NVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMD 537
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G KPD V ++L C HGG + +G F M +G+ P DH+ +VDLL R G L
Sbjct: 538 LEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRL 597
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQ 652
+A++++ +MPF P+ + W TFL C+
Sbjct: 598 FDAKELLESMPFEPDPVAWMTFLTACR 624
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 167/622 (26%), Positives = 307/622 (49%), Gaps = 68/622 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQ 62
RNVVS+N++I+AY++ G+ +AL ++ M +G TF +L +C SL +G ++
Sbjct: 73 RNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL--AQGREIH 130
Query: 63 ASVLKNGLFCADAF--VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
V +GL D+F + AL+ +Y R G + + +F+ + + +WN+++ + G
Sbjct: 131 NRVFYSGL---DSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSG 187
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ +F E+ + ++ ++++ VI G S + L G +IH ++ NGFD +L+VA
Sbjct: 188 DWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVAT 246
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L+NMY +C A ++F ++ RD+VSWN +IG ++ +F +ALELY ++ ++
Sbjct: 247 ALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKR 306
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ TFV ++ +C+ ++ G+ +H+ +++ L+ +V V +ALV+ YAKC +LE A F
Sbjct: 307 TKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVF 366
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRP----NEFTFSHVLRSSLAF 355
+ + N++ V+W+ LI YAS ++ +LG R N ++V
Sbjct: 367 NAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVA 426
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF---VTALNIPRAVVPANIIA 412
+ + G + +++ + A G +S+ A ++ + VV N +
Sbjct: 427 AMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLI 486
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y R G E +L + + +VSW ++AA + G Y E L+LF+ M + PD+
Sbjct: 487 NMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDV 546
Query: 473 TFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
T+ S+L C+ +L G + LHGL ++D F ++D+ G+ G +
Sbjct: 547 TYTSILFVCTHGGSLEQGWRYFTDMAELHGLAP-----TADHFAA--MVDLLGRSGRL-- 597
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
F + L +E + F+PD VA + LTACR
Sbjct: 598 ---------------------------FDAKEL-----LESMPFEPDPVAWMTFLTACRI 625
Query: 586 GGLVREGMELFERMNRSYGVEP 607
G + G ER+ Y ++P
Sbjct: 626 HGKLELGEAAAERV---YELDP 644
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 142/289 (49%), Gaps = 38/289 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
M R++VS+N +I Y + G +AL ++ + GF+ T+ TF +L +C S+ + +G
Sbjct: 268 MKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQG 327
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + +L+ GL ++ V TAL+ +Y + G L+E VF M + V W++++ +
Sbjct: 328 RLVHSHILERGLD-SEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYAS 386
Query: 119 HGFVED----------------------------------CMFLFCELVRSEVALTES-S 143
+G+ +D M +F E+ + ++ +
Sbjct: 387 NGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVT 446
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
F+ V+ ++ L + +H + ++ + ++V N+L+NMY +C + AE++F +
Sbjct: 447 FIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAK 506
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
+ VVSW ++ A ++ + +AL+L+ M ++ V P+ T+ ++ C
Sbjct: 507 EKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVC 555
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/670 (29%), Positives = 349/670 (52%), Gaps = 39/670 (5%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSL-NPVEGA 59
P +++ +N ++ +SR + +AL +F + + G T L C L + V G
Sbjct: 65 PLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGR 124
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ LK+G F D VGT+L+ +Y + ++ +F++M K++V+W S++S + ++
Sbjct: 125 QVHCQSLKSG-FLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARN 183
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ++ + L ++ V +F V+ L++E +E G Q+H +++KNGF++ V
Sbjct: 184 GLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVC 243
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L+ MY + + AE +F + +RD V+WN +IG A + + +++ RM + V
Sbjct: 244 NALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVK 303
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
++T F + C+ + K +H V+KN E + +AL+ Y+KC +++ A
Sbjct: 304 LSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKL 363
Query: 300 FSEI-SNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
FS + N+V+W A+I G+ + ++ ++ L ++ + G RPN FT+S VL + L
Sbjct: 364 FSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL 423
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
QLH II+ YE V +L+ +Y K+G N++
Sbjct: 424 SQLHAQIIKAYYEKVPSVATALLDAYVKTG---------------------NVV------ 456
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
E+ ++ + DIV+W+ ++ A D ++ +E+F + + P+ YTF S+
Sbjct: 457 -----ESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSV 511
Query: 478 LSAC-SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
++AC S + G +H K+ S+ V + L+ MY K G+I S+ K+F +R
Sbjct: 512 INACSSSAATVEHGKQIHATAVKSG-KSNALCVSSALLTMYSKKGNIESAEKVFTRQEER 570
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
++++W ++I+ G +G A++ALE F+ M+ G D V I VLTAC H GLV EG + F
Sbjct: 571 DIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYF 630
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRI 656
M + Y ++ +++HY C+VDL R G +A II MPFP + IWRT L C+ R
Sbjct: 631 NIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRN 690
Query: 657 AKYDTLNSTK 666
+ L + K
Sbjct: 691 LELGKLAAEK 700
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 153/408 (37%), Gaps = 59/408 (14%)
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
N L SIH IK+ L F+ + F + AH F E K+I +N L+
Sbjct: 20 NGRLQSSIHH--IKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLF 77
Query: 317 GYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
++ + E L L F + S L L L C + G + V
Sbjct: 78 DFSRNNHDR------EALHL--------FKDLHSSGLGVDGLTLSCALKVCGVLFDQVVG 123
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
+ KSG + D V + +Y +T + + + ++ ++
Sbjct: 124 RQVHCQSLKSGFLED-------------VSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV 170
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
VSW +++ A NG EV+ L M+ + P+ +TF ++L A + + G +H +
Sbjct: 171 VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAM 230
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
I K TFVCN LI MY K +G + +F+ M R+ +TW +I GF
Sbjct: 231 IVKNGF-EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLE 289
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACR-----------HGGLVREGMELFERMNRSYGV 605
+ F M G K R L C H G+V+ G E + + +
Sbjct: 290 GFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTA--- 346
Query: 606 EPEMDHYHCVVDLLVRYGH---LKEAEKIITTMPFPPNALIWRTFLEG 650
L+V Y + EA K+ + N + W + G
Sbjct: 347 ------------LMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 109/190 (57%), Gaps = 5/190 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVE- 57
+P +++V+++++++ ++ E A+ +F+ ++ G +P ++TF +++ S VE
Sbjct: 465 IPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEH 524
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ A+ +K+G A V +ALL +Y + G ++ VF + +V+WNS+++ +G
Sbjct: 525 GKQIHATAVKSGKSNA-LCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYG 583
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYEL 176
+HG + + +F + + L + +F+GV+ ++ +E GE+ ++IK+ D ++
Sbjct: 584 QHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKI 643
Query: 177 LVANSLVNMY 186
+ +V++Y
Sbjct: 644 EHYSCMVDLY 653
>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 192/610 (31%), Positives = 316/610 (51%), Gaps = 43/610 (7%)
Query: 46 GLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS 105
G + D+ +E Q+Q + K+G F ++ TA L YG+ GC+ +FE+MPR+
Sbjct: 60 GTRALDANTKIEANQIQTHLRKSG-FNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRD 118
Query: 106 LVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHG 165
+V+WN+++ + ++G+ D + +F +++R + + VG++ + G+ IHG
Sbjct: 119 VVSWNALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHG 178
Query: 166 LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
IK+G D + V N+L +MY +CA + +AE +F+++ + VSWNT+IGA ++ F +
Sbjct: 179 FGIKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDE 238
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
A+ ++ +M + V N T + ++++ A L S H VIK D V ++LV
Sbjct: 239 AMLVFKQMQKERVEVNYVTIISLLSANAHLD------STHCYVIKTGFATDASVITSLVC 292
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFT 344
YA C N+E A L ++ + +N+VS A+I GYA K + + ++LQL +P+
Sbjct: 293 SYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVA 352
Query: 345 FSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA---KSGLISDALAFVTALNI 401
+L G+ + ++ GS + +A K+GL +D L
Sbjct: 353 MVSILH-----------------GFTDPTFI-GSGLGIHAYGLKTGLCADCLV------- 387
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
N + +Y++ G L S++ ++SWN VI+AC G + +ELF
Sbjct: 388 ------VNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQ 441
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
MR PD T SLL+ CS++ L G LH + + + D F+ L+DMY KCG
Sbjct: 442 MRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMED-FLETALVDMYIKCG 500
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ S+ ++F + + + TW +IS GL+G RAL + EM+ G KPDR+ + VL+
Sbjct: 501 RLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLS 560
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC HGGLV EG F M +G+ P + H C+VDLL R G L+EA + M P++
Sbjct: 561 ACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDS 620
Query: 642 LIWRTFLEGC 651
IW L C
Sbjct: 621 AIWGALLTSC 630
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 231/474 (48%), Gaps = 19/474 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
MP R+VVS+N++I YSR GY DAL +F+ M+ GF P Q T GL+ SC + + +G
Sbjct: 114 MPRRDVVSWNALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQG 173
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +K+GL D V AL +Y + L +FE++ K+ V+WN+++ +G+
Sbjct: 174 KAIHGFGIKSGLD-LDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQ 232
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G ++ M +F ++ + V E ++V +I LS L + H VIK GF + V
Sbjct: 233 NGLFDEAMLVFKQMQKERV---EVNYVTIISLLSANAHL---DSTHCYVIKTGFATDASV 286
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SLV Y C I SA ++ + R++VS +I AE N G +E + +M +
Sbjct: 287 ITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKM 346
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ V +++ G IHA +K L D V + L+ Y+K ++E
Sbjct: 347 KPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFS 406
Query: 299 CFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
FSE+ K ++SWN++I + ++ L ++ G+ P+ T + +L
Sbjct: 407 LFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGF 466
Query: 358 LQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
LQ LH ++R + +++ +L+ Y K G + A ++ P +I+G
Sbjct: 467 LQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISG 526
Query: 414 IYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
Y +G + + S+++ +PD +++ V++AC H G E F+ MR
Sbjct: 527 -YGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMR 579
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 195/659 (29%), Positives = 333/659 (50%), Gaps = 45/659 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-----CDSLNPV 56
P R+ S+ S++ +SR G ++A R+FL + G E F +L CD L
Sbjct: 54 PGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELF-- 111
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G QL +K G F D VGT+L+ Y + + VF++M +++VTW +++S +
Sbjct: 112 -GRQLHCQCIKFG-FLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGY 169
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ ++ + LF + +F + L+ E G Q+H +V+KNG D +
Sbjct: 170 ARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 229
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V+NSL+N+Y +C + A +F E++ VV+WN++I A + +AL ++ M ++
Sbjct: 230 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 289
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V ++++F VI CA L+ + +H V+K D + +AL+ Y+KC + A
Sbjct: 290 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 297 HLCFSEIS-NKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
F EI N+VSW A+I G+ + ++ L E+ + G RPNEFT+S +L +
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV 409
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
++H +++ YE V +L+ +Y K
Sbjct: 410 ISPSEVHAQVVKTNYERSSTVGTALLDAYVK----------------------------- 440
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
G+ E K+ S ++ DIV+W+ ++A A G+ + +++F + I P+ +TF
Sbjct: 441 ---LGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTF 497
Query: 475 VSLLSACSKL-CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
S+L+ C+ ++ G HG K+ + SS V + L+ MY K G+I S+ ++F
Sbjct: 498 SSILNVCAATNASMGQGKQFHGFAIKSRLDSS-LCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++++++W ++IS +G A +AL+ F+EM+ K D V I V AC H GLV EG
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F+ M R + P +H C+VDL R G L++A K+I MP P + IWRT L C+
Sbjct: 617 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACR 675
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 173/619 (27%), Positives = 309/619 (49%), Gaps = 51/619 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
M +RNVV++ ++IS Y+R ++ L +F+ M N G +P FTF L + V G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ V+KNGL V +L+ LY + G + + +F+ KS+VTWNS++S +
Sbjct: 214 LQVHTVVVKNGL-DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + +F + + V L+ESSF VI +N ++L F EQ+H V+K GF ++ +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+L+ Y +C + A ++FK++ + +VVSW +I +++ +A++L+ M
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN+ T+ ++ + + S +HA+V+K E VG+AL+D Y K +E A
Sbjct: 393 VRPNEFTYSVILTALPVISPS----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448
Query: 298 LCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF- 355
FS I +K+IV+W+A++ GYA + + +I + EL + G +PNEFTFS +L A
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Query: 356 ----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
Q Q H I+ ++ V +L+T YAK G I A
Sbjct: 509 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESA------------------- 549
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++ R Q E+ D+VSWN +I+ A +G + L++FK M+ ++ D
Sbjct: 550 EEVFKR------------QREK-DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+ + +AC+ + G ++ + I+ + ++D+Y + G + ++K+
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Query: 532 EMTDRNVIT-WTALISALGLNGFAQRALEKFREMEFLGFKP-DRVALIAVLTACRHGGLV 589
M + T W +++A ++ + L + + + KP D A + + G
Sbjct: 657 NMPNPAGSTIWRTILAACRVH--KKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDW 714
Query: 590 REGMELFERMN-RSYGVEP 607
+E ++ + MN R+ EP
Sbjct: 715 QERAKVRKLMNERNVKKEP 733
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/564 (23%), Positives = 258/564 (45%), Gaps = 50/564 (8%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
++F+ P + ++ S++ F + G ++ LF + R + + S F V+ +
Sbjct: 48 NLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLC 107
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
D FG Q+H IK GF ++ V SLV+ Y + + K+F +++ R+VV+W T+I
Sbjct: 108 DELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLIS 167
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
A + + L L++RM + PN TF + A G +H V+KN L+
Sbjct: 168 GYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDK 227
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
+ V ++L++ Y KC N+ A + F + K++V+WN++I GYA+ + ++
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 336 LGY-RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
L Y R +E +F+ V++ + L QLHC +++ G+ + + +LM +Y+K +
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML 347
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
DAL + V VSW +I+ N
Sbjct: 348 DALRLFKEIGCVGNV-------------------------------VSWTAMISGFLQND 376
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
+E ++LF M+ + P+ +T+ +L+A + S +H + KT S T V
Sbjct: 377 GKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSST-VG 431
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
L+D Y K G + + K+F+ + D++++ W+A+++ G + A++ F E+ G K
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 491
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV----RYGHLK 626
P+ ++L C + F + ++ +D CV L+ + G+++
Sbjct: 492 PNEFTFSSILNVCAATNASMGQGKQFH----GFAIKSRLDSSLCVSSALLTMYAKKGNIE 547
Query: 627 EAEKIITTMPFPPNALIWRTFLEG 650
AE++ + + W + + G
Sbjct: 548 SAEEVFKRQR-EKDLVSWNSMISG 570
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 198/663 (29%), Positives = 338/663 (50%), Gaps = 76/663 (11%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+L A ++K G F D + L+ LY + + ++ +V+W+S++S + ++
Sbjct: 2 ELHAHLIKFG-FSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
GFVE+ + +F E+ V E +F V+ S ++DL G ++HG+ + GF+ + VA
Sbjct: 61 GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+LV MY +C + + ++F + R+VVSWN + +SE G+A+ L+ M +
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN+ + ++N+CAGLQ LG+ IH ++K L+ D F +ALVD Y+K +EGA
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240
Query: 300 FSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS--SLAFQ 356
F +I++ ++VSWNA+I G + ++ LL E+ G RPN FT S L++ ++ F+
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300
Query: 357 LL--QLHCLIIRMG--------------YENYEYV-----------------LGSLMTSY 383
L QLH +I+M Y E + +L++ Y
Sbjct: 301 ELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGY 360
Query: 384 AKSGLISDAL-------------------------AFVTALNIPRAVVPANIIAGIYN-- 416
++ G DA+ A + A+ + + + +I +GIY+
Sbjct: 361 SQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDF 420
Query: 417 -----------RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+ +E K+ + D+V++ +I A + GD +E L+L+ M+ A
Sbjct: 421 YVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDA 480
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
I PD + SLL+AC+ L G LH K + D F N L++MY KCGSI
Sbjct: 481 DIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMC-DIFASNSLVNMYAKCGSIED 539
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ + F+E+ +R +++W+A+I +G + AL F +M G P+ + L++VL AC H
Sbjct: 540 ADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNH 599
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GLV EG + FE+M +G++P +HY C++DLL R G L EA +++ ++PF + +W
Sbjct: 600 AGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWG 659
Query: 646 TFL 648
L
Sbjct: 660 ALL 662
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 152/580 (26%), Positives = 277/580 (47%), Gaps = 56/580 (9%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQ 60
+RNVVS+N++ S Y + +A+ +F M+ G P +F+ +L +C L + G +
Sbjct: 145 ERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRK 204
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ +LK GL D F AL+ +Y + G ++ V+VF+D+ +V+WN+I++ H
Sbjct: 205 IHGLMLKMGLDL-DQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHD 263
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + L E+ S + + + E G Q+H +IK +L A
Sbjct: 264 CNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAV 323
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVF 239
LV+MY +C + A + + + +D+++WN +I ++ + A+ L+ +M S DI F
Sbjct: 324 GLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDF 383
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
NQTT V+ S A LQ + K IH IK+ + D +V ++L+D Y KC++++ A
Sbjct: 384 -NQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKI 442
Query: 300 FSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRS----SLA 354
F E + +++V++ ++I Y+ ++ L +++ +P+ F S +L + S
Sbjct: 443 FEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAY 502
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIAG 413
Q QLH I+ G+ + SL+ YAK G I DA AF N R +V + + G
Sbjct: 503 EQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPN--RGIVSWSAMIG 560
Query: 414 IYNRTGQYNETVKLLSQLER----PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
Y + G E ++L +Q+ R P+ ++ V+ AC H G E + F+ M
Sbjct: 561 GYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKME------ 614
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ G IK T+ + + C +ID+ G+ G + +V++
Sbjct: 615 -----------------VMFG------IKPTQ----EHYAC--MIDLLGRSGKLNEAVEL 645
Query: 530 FNEMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
N + + + W AL+ A ++ Q+A + ++E
Sbjct: 646 VNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLE 685
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 149/261 (57%), Gaps = 5/261 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP ++++++N++IS YS+CG DA+ +F M + + Q T +L S SL ++
Sbjct: 345 MPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVC 404
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K+G++ +D +V +LL YG+ +DE +FE+ + LV + S+++ + +
Sbjct: 405 KQIHTISIKSGIY-SDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQ 463
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G E+ + L+ ++ +++ +++ +N E G+Q+H IK GF ++
Sbjct: 464 YGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFA 523
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+NSLVNMY +C I A++ F ++ R +VSW+ +IG A+ + +AL L+ +M D V
Sbjct: 524 SNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGV 583
Query: 239 FPNQTTFVYVINSC--AGLQN 257
PN T V V+ +C AGL N
Sbjct: 584 PPNHITLVSVLCACNHAGLVN 604
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
+P+R +VS++++I Y++ G+ ++ALR+F M+ G P T +L +C+ V EG
Sbjct: 547 IPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEG 606
Query: 59 AQ-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP 102
Q + + G+ ++ L GR G L+E V + +P
Sbjct: 607 KQYFEKMEVMFGIKPTQEHY-ACMIDLLGRSGKLNEAVELVNSIP 650
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 194/628 (30%), Positives = 335/628 (53%), Gaps = 20/628 (3%)
Query: 38 EPTQFTFGGLL-SCDSL-NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVV 95
+P TF +L SC S + VEG L + + F D VG AL+ +YG+ L +
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERI-RCSRFERDTMVGNALISMYGKCDSLVDAR 62
Query: 96 SVFEDMP--RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
SVFE M ++++V+WN++++ + ++G + + L+ + + +FV V+ S+
Sbjct: 63 SVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS 122
Query: 154 EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTI 213
L G +IH V +G D +AN+LV MY + + A++MF+ ++ RD SWN +
Sbjct: 123 ---LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAV 179
Query: 214 IGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
I A ++S ++ AL ++ M D V PN TT++ VI+ + + G+ IHA+++ N
Sbjct: 180 ILAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL 333
+ D+ V +AL++ Y KC + A F ++ +++VSWN +I Y L +
Sbjct: 239 DTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQK 298
Query: 334 LQL-GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
L + G++ + TF +L + + + L +H I+ G ++ V +L+ YAK G
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGS 358
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTG---QYNETVKLLSQLERPDIVSWNIVIAA 445
+ +A A+ AV + +I G Y G + K+ +L D +SWN +I
Sbjct: 359 LEEARKVFNAMKNRDAVAWSTLI-GAYASNGYGKDARKARKVFDRLGSRDTISWNAMITT 417
Query: 446 CAHNGDYKEVLELFKYMR-AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
NG +++F+ M AA + PD TF+++L AC+ L L+ +LH I ++E+
Sbjct: 418 YVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESEL-E 476
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
S+ V N LI+MY +CGS+ + ++F ++ V++WTA+++A G AL+ F+EM
Sbjct: 477 SNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEM 536
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
+ G KPD V ++L C HGG + +G F M + + P DH+ +VDLL R G
Sbjct: 537 DLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGR 596
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L +A++++ +MPF P+ + W TFL C+
Sbjct: 597 LFDAKELLESMPFEPDPVAWMTFLTACR 624
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 166/617 (26%), Positives = 304/617 (49%), Gaps = 58/617 (9%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQ 62
RNVVS+N++I+AY++ G+ +AL ++ M +G TF +L +C SL +G ++
Sbjct: 73 RNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL--AQGREIH 130
Query: 63 ASVLKNGLFCADAF--VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
V +GL D+F + AL+ +Y R G + + +F+ + + +WN+++ + G
Sbjct: 131 NRVFYSGL---DSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSG 187
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ +F E+ + +V ++++ VI G S + L G +IH ++ NGFD +L+VA
Sbjct: 188 DWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVAT 246
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L+NMY +C A ++F ++ RD+VSWN +IG + +F +ALELY ++ ++
Sbjct: 247 ALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKR 306
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ TFV ++ +C+ ++ G+ +H+ +++ L+ +V V +ALV+ YAKC +LE A F
Sbjct: 307 TKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVF 366
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRP----NEFTFSHVLRSSLAF 355
+ + N++ V+W+ LI YAS ++ +LG R N ++V
Sbjct: 367 NAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVA 426
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF---VTALNIPRAVVPANIIA 412
+ + G + +++ + A G +S+ A ++ + VV N +
Sbjct: 427 AMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLI 486
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y R G E +L + + +VSW ++AA + G Y E L+LF+ M + PD+
Sbjct: 487 NMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDV 546
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T+ S+L C+ HG GS+ + F +
Sbjct: 547 TYTSILFVCT-----------HG-------------------------GSLEQGWRYFTD 570
Query: 533 MTDRNVITWTA--LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
M + + + TA + + L G + R + +E + F+PD VA + LTACR G +
Sbjct: 571 MAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLE 630
Query: 591 EGMELFERMNRSYGVEP 607
G ER+ Y ++P
Sbjct: 631 LGEAAAERV---YELDP 644
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 141/289 (48%), Gaps = 38/289 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
M R++VS+N +I Y G +AL ++ + GF+ T+ TF +L +C S+ + +G
Sbjct: 268 MKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQG 327
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + +L+ GL ++ V TAL+ +Y + G L+E VF M + V W++++ +
Sbjct: 328 RLVHSHILERGLD-SEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYAS 386
Query: 119 HGFVED----------------------------------CMFLFCELVRSEVALTES-S 143
+G+ +D M +F E+ + ++ +
Sbjct: 387 NGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVT 446
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
F+ V+ ++ L + +H + ++ + ++V N+L+NMY +C + AE++F +
Sbjct: 447 FIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAK 506
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
+ VVSW ++ A ++ + +AL+L+ M ++ V P+ T+ ++ C
Sbjct: 507 EKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVC 555
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF---------GGLLSCDSL 53
++ VVS+ ++++A+S+ G +AL +F M G +P T+ GG L
Sbjct: 507 EKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWR 566
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSI 112
+ A+L A AD F A++ L GR G L + + E MP V W +
Sbjct: 567 YFTDMAELHALAP-----TADHFA--AMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTF 619
Query: 113 VSIFGKHGFVE 123
++ HG +E
Sbjct: 620 LTACRIHGKLE 630
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 197/670 (29%), Positives = 348/670 (51%), Gaps = 39/670 (5%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSL-NPVEGA 59
P +++ +N ++ +SR + +AL +F + + G T L C L + V G
Sbjct: 65 PLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGR 124
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ LK+G F D VGT+L+ +Y + ++ +F++M K++V+W S++S + ++
Sbjct: 125 QVHCQSLKSG-FLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARN 183
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ++ + L ++ V +F V+ L++E +E G Q+H +++KNGF++ V
Sbjct: 184 GLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVC 243
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L+ MY + + AE +F + +RD V+WN +IG A + + +++ RM + V
Sbjct: 244 NALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVK 303
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
++T F + C+ + K +H V+KN E + +AL+ Y+KC +++ A
Sbjct: 304 LSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKL 363
Query: 300 FSEI-SNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
FS + N+V+W A+I G+ + ++ ++ L ++ + G RPN FT+S VL + L
Sbjct: 364 FSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL 423
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
QLH II+ YE V +L+ +Y K+G N++
Sbjct: 424 SQLHAQIIKAYYEKVPSVATALLDAYVKTG---------------------NVV------ 456
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
E+ ++ + DIV+W+ ++ A D ++ +E+F + + P+ YTF S+
Sbjct: 457 -----ESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSV 511
Query: 478 LSAC-SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
++AC S + G +H K+ S+ V + L+ MY K G+I S+ K+F +R
Sbjct: 512 INACSSSAATVEHGKQIHATAVKSG-KSNALCVSSALLTMYSKKGNIESAEKVFTRQEER 570
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
++++W ++I+ G +G A++ALE F+ M+ G D V I VLTAC H GLV EG + F
Sbjct: 571 DIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYF 630
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRI 656
M + Y ++ + +HY C+VDL R G +A II MPFP + IWRT L C+ R
Sbjct: 631 NIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRN 690
Query: 657 AKYDTLNSTK 666
+ L + K
Sbjct: 691 LELGKLAAEK 700
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 153/408 (37%), Gaps = 59/408 (14%)
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
N L SIH IK+ L F+ + F + AH F E K+I +N L+
Sbjct: 20 NGRLQSSIHH--IKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLF 77
Query: 317 GYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
++ + E L L F + S L L L C + G + V
Sbjct: 78 DFSRNNHDR------EALHL--------FKDLHSSGLGVDGLTLSCALKVCGVLFDQVVG 123
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
+ KSG + D V + +Y +T + + + ++ ++
Sbjct: 124 RQVHCQSLKSGFLED-------------VSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV 170
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
VSW +++ A NG EV+ L M+ + P+ +TF ++L A + + G +H +
Sbjct: 171 VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAM 230
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
I K TFVCN LI MY K +G + +F+ M R+ +TW +I GF
Sbjct: 231 IVKNGF-EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLE 289
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACR-----------HGGLVREGMELFERMNRSYGV 605
+ F M G K R L C H G+V+ G E + + +
Sbjct: 290 GFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTA--- 346
Query: 606 EPEMDHYHCVVDLLVRYGH---LKEAEKIITTMPFPPNALIWRTFLEG 650
L+V Y + EA K+ + N + W + G
Sbjct: 347 ------------LMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 100/173 (57%), Gaps = 4/173 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVE- 57
+P +++V+++++++ ++ E A+ +F+ ++ G +P ++TF +++ S VE
Sbjct: 465 IPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEH 524
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ A+ +K+G A V +ALL +Y + G ++ VF + +V+WNS+++ +G
Sbjct: 525 GKQIHATAVKSGKSNA-LCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYG 583
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
+HG + + +F + + L + +F+GV+ ++ +E GE+ ++IK+
Sbjct: 584 QHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKD 636
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 193/656 (29%), Positives = 332/656 (50%), Gaps = 41/656 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGAQL 61
R+ VS+ +++S Y++ G E+AL ++ M G PT + +LS + + +G +
Sbjct: 106 RDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLI 165
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A K+G FC++ FVG A++ LY R G VF DMP + VT+N+++S + G
Sbjct: 166 HAQGYKHG-FCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGH 224
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E + +F E+ S ++ + ++ ++ DL+ G Q+H + K G + ++ S
Sbjct: 225 GEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS 284
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+++Y +C + +A +F + +VV WN ++ A + + K+ EL+ +M + PN
Sbjct: 285 LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
Q T+ ++ +C + LG+ IH+ +K E D++V L+D Y+K LE A
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404
Query: 302 EISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF----Q 356
+ K++VSW ++I GY + ++ E+ + G P+ + + Q
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
LQ+H I GY + +L+ YA+ G I +A +
Sbjct: 465 GLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSS--------------------- 503
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
++E D ++ N +++ A +G ++E L++F M + + + +TFVS
Sbjct: 504 -----------FEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVS 552
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LSA + L + G +H + KT S +T V N LI +YGKCGS + F+EM++R
Sbjct: 553 ALSASANLAEIKQGKQIHARVIKTG-HSFETEVGNALISLYGKCGSFEDAKMEFSEMSER 611
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
N ++W +I++ +G AL+ F +M+ G KP+ V I VL AC H GLV EG+ F
Sbjct: 612 NEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYF 671
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ M+ YG+ P DHY CV+D+ R G L A+K I MP +A++WRT L C+
Sbjct: 672 KSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACK 727
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/582 (25%), Positives = 280/582 (48%), Gaps = 40/582 (6%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
VG L+ LY ++G + VFE++ + V+W +++S + ++G E+ + L+ ++ R+
Sbjct: 79 VGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAG 138
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
V T V+ + + G IH K+GF E+ V N+++ +Y +C AE
Sbjct: 139 VVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAE 198
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
++F D+ RD V++NT+I A+ + ALE++ M + P+ T ++ +CA L
Sbjct: 199 RVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG 258
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ G +H+ + K + D + +L+D Y KC ++E A + F+ N+V WN +++
Sbjct: 259 DLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLV 318
Query: 317 GYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYEN 371
+ + F L ++ G RPN+FT+ +LR+ + + Q+H L ++ G+E+
Sbjct: 319 AFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFES 378
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
YV G L+ Y+K G + A ++L L
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKAR--------------------------------RVLEML 406
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
+ D+VSW +IA + K+ L FK M+ I+PDN S +S C+ + + G
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL 466
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H I + S D + N L+++Y +CG I + F EM ++ IT L+S +
Sbjct: 467 QIHARIYVSGY-SGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQS 525
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G + AL+ F M+ G K + ++ L+A + +++G ++ R+ ++ G E +
Sbjct: 526 GLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT-GHSFETEV 584
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ ++ L + G ++A+ + M N + W T + C +
Sbjct: 585 GNALISLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQ 625
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/557 (26%), Positives = 275/557 (49%), Gaps = 45/557 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+ V+FN++IS +++CG+ E AL +F M G P T LL+ C SL ++ G
Sbjct: 204 MPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKG 263
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL + + K G+ +D + +LL LY + G ++ + +F R ++V WN ++ FG+
Sbjct: 264 TQLHSYLFKAGI-SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ LFC++ + + + ++ ++ + ++++ GEQIH L +K GF+ ++ V
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ L++MY + + A ++ + ++ +DVVSW ++I + E AL + M +
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+P+ I+ CAG+ G IHA++ + DV + +ALV+ YA+C + A
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFS 502
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF-- 355
F E+ K+ ++ N L+ G+A ++ + + + Q G + N FTF L +S
Sbjct: 503 SFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAE 562
Query: 356 --QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q Q+H +I+ G+ ++E +G N +
Sbjct: 563 IKQGKQIHARVIKTGH-SFETEVG-------------------------------NALIS 590
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y + G + + S++ + VSWN +I +C+ +G E L+LF M+ I P++ T
Sbjct: 591 LYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVT 650
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
F+ +L+ACS + + G S + I D + C +ID++G+ G + + K
Sbjct: 651 FIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC--VIDIFGRAGQLDRAKKFIE 708
Query: 532 EMT-DRNVITWTALISA 547
EM + + W L+SA
Sbjct: 709 EMPIAADAMVWRTLLSA 725
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 249/534 (46%), Gaps = 40/534 (7%)
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL-SNEQDLEF 159
M R+ + ++ F H + LF + R L F + N + +
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
+IH + G +V N L+++Y + + A ++F+++ RD VSW ++ A+
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ +AL LY +M V P V++SC + G+ IHA+ K+ ++FV
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GY 338
G+A++ Y +C + A F ++ +++ V++N LI G+A + E +Q G
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGL 240
Query: 339 RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
P+ T S +L + + L QLH + + G + + GSL+ Y K G + AL
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALV 300
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
I+N + +R ++V WN+++ A D +
Sbjct: 301 -------------------IFNSS-------------DRTNVVLWNLMLVAFGQINDLAK 328
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
ELF M+AA I P+ +T+ +L C+ + LG +H L KT SD +V +LI
Sbjct: 329 SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTG-FESDMYVSGVLI 387
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
DMY K G + + ++ + +++V++WT++I+ + + AL F+EM+ G PD +
Sbjct: 388 DMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNI 447
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
L + ++ C +R+G+++ R+ S G ++ ++ +V+L R G ++EA
Sbjct: 448 GLASAISGCAGINAMRQGLQIHARIYVS-GYSGDVSIWNALVNLYARCGRIREA 500
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 195/656 (29%), Positives = 351/656 (53%), Gaps = 42/656 (6%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ-LQ 62
++ +NSIIS++ R G + AL + M+ G P TF L+ +C +L +G L
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLS 161
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+V G+ C + FV ++L+ Y +G +D +F+ + +K V WN +++ + K G +
Sbjct: 162 DTVSSLGMDC-NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ + F + +++ +F V+ +++ ++ G Q+HGLV+ +G D+E + NSL
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
++MY +C A K+F+ + D V+WN +I +S ++L + M V P+
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
TF ++ S + +N K IH ++++++ D+F+ SAL+D Y KC + A FS+
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400
Query: 303 ISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS---LAFQL- 357
++ ++V + A+I GY S+ + L+++ PNE T +L LA +L
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG 460
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+LH II+ G++N NI AV+ +Y +
Sbjct: 461 RELHGFIIKKGFDN--------------------------RCNIGCAVI------DMYAK 488
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G+ N ++ +L + DIVSWN +I CA + + +++F+ M + I D + +
Sbjct: 489 CGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAA 548
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
LSAC+ L + + G ++HG + K + +SD + + LIDMY KCG++ +++ +F M ++N
Sbjct: 549 LSACANLPSESFGKAIHGFMIKHSL-ASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKN 607
Query: 538 VITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+++W ++I+A G +G + +L F EM E G +PD++ + ++++C H G V EG+ F
Sbjct: 608 IVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFF 667
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M YG++P+ +HY CVVDL R G L EA + + +MPFPP+A +W T L C+
Sbjct: 668 RSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACR 723
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 159/616 (25%), Positives = 286/616 (46%), Gaps = 50/616 (8%)
Query: 47 LLSCDSLNPV-EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE--DMPR 103
L +C + N + +G Q+ A ++ N + D++ +LG+Y G + +F D+ R
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSI-SGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 104 KSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH---GLSNEQDLEFG 160
S+ WNSI+S F ++G + + + +++ V+ S+F ++ L N + ++F
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF- 159
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
+ V G D VA+SL+ Y + I K+F V +D V WN ++ A+
Sbjct: 160 --LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
++ + M +D + PN TF V++ CA LG +H V+ + ++ + +
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYR 339
++L+ Y+KC + A F +S + V+WN +I GY S S+ E++ G
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 340 PNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
P+ TFS +L S F+ L Q+HC I+R ++ +L+ +Y K +S
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVS----- 392
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
A NI SQ D+V + +I+ HNG Y +
Sbjct: 393 -MAQNI--------------------------FSQCNSVDVVVFTAMISGYLHNGLYIDS 425
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
LE+F+++ +I P+ T VS+L L L LG LHG I K + C +ID
Sbjct: 426 LEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGC-AVID 484
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY KCG + + +IF ++ R++++W ++I+ + A++ FR+M G D V+
Sbjct: 485 MYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVS 544
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+ A L+AC + G + M + + + ++ ++D+ + G+LK A + TM
Sbjct: 545 ISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM 603
Query: 636 PFPPNALIWRTFLEGC 651
N + W + + C
Sbjct: 604 K-EKNIVSWNSIIAAC 618
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 134/569 (23%), Positives = 268/569 (47%), Gaps = 35/569 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
++ V +N +++ Y++CG ++ ++ F M P TF +LS C S ++ G QL
Sbjct: 202 KDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 261
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V+ +G+ + + +LL +Y + G D+ +F M R VTWN ++S + + G
Sbjct: 262 HGLVVVSGVD-FEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGL 320
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+E+ + F E++ S V +F ++ +S ++LE+ +QIH ++++ ++ + ++
Sbjct: 321 MEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSA 380
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L++ YF+C G+ A+ +F DVV + +I + + +LE++ + + PN
Sbjct: 381 LIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPN 440
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ T V ++ L LG+ +H +IK + +G A++D YAKC + A+ F
Sbjct: 441 EITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE 500
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
+S ++IVSWN++I A +P++ + Q+G S + ++
Sbjct: 501 RLSKRDIVSWNSMITRCAQSDNPSAAIDIFR--QMG-------VSGICYDCVSISAALSA 551
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
C + E++ + M K L SD + T ++ +Y + G
Sbjct: 552 C--ANLPSESFGKAIHGFMI---KHSLASDVYSESTLID-------------MYAKCGNL 593
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSA 480
+ + ++ +IVSWN +IAAC ++G K+ L LF M + I PD TF+ ++S+
Sbjct: 594 KAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISS 653
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVI 539
C + ++ G + + I ++D++G+ G + + + M +
Sbjct: 654 CCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAG 713
Query: 540 TWTALISALGLNG---FAQRALEKFREME 565
W L+ A L+ A+ A K +++
Sbjct: 714 VWGTLLGACRLHKNVELAEVASSKLMDLD 742
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 195/357 (54%), Gaps = 9/357 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEG-- 58
M + V++N +IS Y + G +E++L F MI+ G P TF LL S++ E
Sbjct: 300 MSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLP--SVSKFENLE 357
Query: 59 --AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
Q+ ++++ + D F+ +AL+ Y + + ++F +V + +++S +
Sbjct: 358 YCKQIHCYIMRHSI-SLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGY 416
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+G D + +F LV+ +++ E + V ++ + L+ G ++HG +IK GFD
Sbjct: 417 LHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRC 476
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ ++++MY +C + A ++F+ + RD+VSWN++I A+S+N A++++ +M V
Sbjct: 477 NIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS 536
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ + + +++CA L + GK+IH +IK++L DV+ S L+D YAKC NL+ A
Sbjct: 537 GICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAA 596
Query: 297 HLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQL-GYRPNEFTFSHVLRS 351
F + KNIVSWN++I + S+ L E+++ G RP++ TF ++ S
Sbjct: 597 MNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISS 653
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 231/516 (44%), Gaps = 46/516 (8%)
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR- 205
++ SN L G+Q+H +I N + ++ MY C KMF +++R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 206 -DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+ WN+II + + +AL Y +M V P+ +TF ++ +C L+N +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
V ++C+ FV S+L+ Y + ++ F + K+ V WN ++ GYA +
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 325 TSI---FLLIELLQLGYRPNEFTFSHVLR---SSLAFQL-LQLHCLIIRMGYENYEYVLG 377
S+ F ++ + Q+ PN TF VL S L L +QLH L++ G + +
Sbjct: 221 DSVIKGFSVMRMDQIS--PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
SL++ Y+K G++++ KL + R D V
Sbjct: 279 SLLSMYSK--------------------------------CGRFDDASKLFRMMSRADTV 306
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
+WN +I+ +G +E L F M ++ + PD TF SLL + SK NL +H I
Sbjct: 307 TWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYI 366
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
+ IS D F+ + LID Y KC + + IF++ +V+ +TA+IS NG +
Sbjct: 367 MRHS-ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDS 425
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
LE FR + + P+ + L+++L ++ G EL + + G + + V+D
Sbjct: 426 LEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK-GFDNRCNIGCAVID 484
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ + G + A +I + + + W + + C +
Sbjct: 485 MYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQ 519
>gi|302817750|ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
gi|300141718|gb|EFJ08427.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
Length = 917
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 201/725 (27%), Positives = 363/725 (50%), Gaps = 82/725 (11%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGAQL 61
++VVS+ S+I Y + +AL +F M G P + T+ +S C + + +G +
Sbjct: 167 QDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLI 226
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ VL++G F +D V A++ +YG+ G L++ VFE MP + V+WN+IV+ +HG
Sbjct: 227 HSQVLEDG-FESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGC 285
Query: 122 VEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ ++ F + ++ + +F+ +++ S+ L FGE ++ +++ G+D L+V N
Sbjct: 286 CVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLYECILQCGYDTHLIVGN 345
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
++ MY C I +A F + RD +SWNTII A++ +A+ L+ RM + + P
Sbjct: 346 CIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITP 405
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
++ TF+ +I+ A +Q + K + ++++ +E DVF+ SAL++ +++ N+ A F
Sbjct: 406 DKFTFISIIDGTARMQEA---KILSELMVESGVELDVFLVSALINMHSRYGNVREARSLF 462
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ 359
++ +++IV W ++I Y S L++L G N+FT L + + L
Sbjct: 463 DDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALS 522
Query: 360 ----LHCLIIRMGYENYEYVLGSLMTSYAK------------------------------ 385
+H I G+ V +L+ YAK
Sbjct: 523 EGKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFHQCGKNLVSWNTIAAAYVQ 582
Query: 386 ----------------SGLISDALAFVTALNIPRAVVPANIIAGIYNRTG---------- 419
GL +D ++FVT LN + + I I TG
Sbjct: 583 RDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSASEGSKIHNILLETGMESDHIVSTA 642
Query: 420 ---------QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+E ++ S++E DIVSWN +IA A +G +E +++F+ M+ + PD
Sbjct: 643 LLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPD 702
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKK---TEIISSDTFVCNMLIDMYGKCGSIGSSV 527
+FV++L+A S +L + L++K + +DT V N ++ M+G+ G + +
Sbjct: 703 KISFVTVLNAFSGSSPSSLKQAR--LVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEAR 760
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+ F + +R+ +W +++A +G ++AL+ FR M+ +PD + L++VL+AC HGG
Sbjct: 761 RAFERIRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACSHGG 820
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
L+ EG F M R +G+ +HY CVVDLL R G L +AE+++ MP P + ++W T
Sbjct: 821 LIEEGYYHFTSMGREFGIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLWMTL 880
Query: 648 LEGCQ 652
L C+
Sbjct: 881 LSACK 885
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 165/596 (27%), Positives = 299/596 (50%), Gaps = 48/596 (8%)
Query: 43 TFGGLLS-CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM 101
TF LL C + + + S ++ F D V A + +YG+ GC+++ V+VF+ +
Sbjct: 4 TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSL 63
Query: 102 PRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGE 161
S V+WNS+++ F + G + +F + +A +FV V+ G + DL G+
Sbjct: 64 DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRGK 123
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
+HG V++ G + ++V SL+ MY +C + A ++F + ++DVVSW ++I + +
Sbjct: 124 LLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHD 183
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
+ALEL+ RM V PN+ T+ I++CA +++ GK IH++V+++ E DV V
Sbjct: 184 RCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSC 243
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL--GYR 339
A+V+ Y KC +LE A F + + N VSWNA++ + +QL G
Sbjct: 244 AIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGST 303
Query: 340 PNEFTFSHVLR-----SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
P++ TF +L ++L F L C I++ GY+ + V +MT Y+ G I +A A
Sbjct: 304 PDKVTFITILNACSSPATLTFGELLYEC-ILQCGYDTHLIVGNCIMTMYSSCGRIDNAAA 362
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
F + + +ER D +SWN +I+ A G E
Sbjct: 363 FFSTM-------------------------------VER-DAISWNTIISGHAQAGFCDE 390
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
+ LF+ M A I PD +TF+S++ +++ + S L +++ + D F+ + LI
Sbjct: 391 AVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKILSEL--MVESG--VELDVFLVSALI 446
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
+M+ + G++ + +F++M DR+++ WT++IS+ +G + AL R M G +
Sbjct: 447 NMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDF 506
Query: 575 ALIAVLTACRHGGLVREGMELFER-MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
L+ L AC + EG + + R + P + + ++++ + G L+EA+
Sbjct: 507 TLVTALNACASLTALSEGKLIHSHAIERGFAASPAVG--NALINMYAKCGCLEEAD 560
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 175/699 (25%), Positives = 337/699 (48%), Gaps = 81/699 (11%)
Query: 7 VSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGAQLQAS 64
VS+NS+++A++R G + A ++F M +G P + TF +L C + + G L
Sbjct: 69 VSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRGKLLHGF 128
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
VL+ GL + VGT+L+ +YG+ GC+++ VF+ + + +V+W S++ + +H +
Sbjct: 129 VLEAGLE-RNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVE 187
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ LF + S V ++ I ++ + + G+ IH V+++GF+ +++V+ ++VN
Sbjct: 188 ALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVN 247
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD-IVFPNQT 243
MY +C + A ++F+ + + VSWN I+ A + +AL + RM + P++
Sbjct: 248 MYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKV 307
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
TF+ ++N+C+ G+ ++ +++ + + VG+ ++ Y+ C ++ A FS +
Sbjct: 308 TFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTM 367
Query: 304 SNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ-LH 361
++ +SWN +I G+A ++ L +L G P++FTF ++ + Q + L
Sbjct: 368 VERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKILS 427
Query: 362 CLIIRMGYE----------NYEYVLG---------------------SLMTSYAKSGLIS 390
L++ G E N G S+++SY + G
Sbjct: 428 ELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSD 487
Query: 391 DALA----------------FVTALN------------------IPR--AVVPA--NIIA 412
DAL VTALN I R A PA N +
Sbjct: 488 DALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAASPAVGNALI 547
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G E + Q + ++VSWN + AA ++E L+LF+ M+ + D
Sbjct: 548 NMYAKCGCLEEADLVFHQCGK-NLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKV 606
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+FV++L+ CS + + GS +H ++ +T + SD V L++MY S+ + +IF+
Sbjct: 607 SFVTVLNGCS---SASEGSKIHNILLETG-MESDHIVSTALLNMYTASKSLDEASRIFSR 662
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR-E 591
M R++++W A+I+ +G ++ A++ F+ M+ G PD+++ + VL A +
Sbjct: 663 MEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLK 722
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
L E++ G E + + +V + R G L EA +
Sbjct: 723 QARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARR 761
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 186/416 (44%), Gaps = 41/416 (9%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
++ TF+ ++ CA G+ +H++V + D V +A + Y KC +E A F
Sbjct: 1 DRGTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVF 60
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ 359
+ + + VSWN+L+ +A F + + ++L G P+ TF VL A L
Sbjct: 61 QSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLS 120
Query: 360 ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
LH ++ G E V SL+ Y K G +
Sbjct: 121 RGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCV-------------------------- 154
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ ++ +L D+VSW +I + E LELF MR + + P+ T+
Sbjct: 155 ------EDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYA 208
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
+ +SAC+ + ++A G +H + + + SD V +++MYGKCGS+ + ++F M
Sbjct: 209 TAISACAHVESMADGKLIHSQVLE-DGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPH 267
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFL-GFKPDRVALIAVLTACRHGGLVREGME 594
N ++W A+++A +G AL F+ M+ G PD+V I +L AC + G
Sbjct: 268 PNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGEL 327
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
L+E + + G + + +C++ + G + A +TM +A+ W T + G
Sbjct: 328 LYECILQC-GYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTM-VERDAISWNTIISG 381
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 130/258 (50%), Gaps = 3/258 (1%)
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
V A R + N +Y + G + V + L+ P VSWN ++AA A +G +++
Sbjct: 28 VEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSLDHPSQVSWNSLLAAFARDGQFQQA 87
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
++F+ M+ + PD TFV++L C+ +L+ G LHG + + + + V LI
Sbjct: 88 FQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRGKLLHGFVLEAGL-ERNVMVGTSLIK 146
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MYGKCG + + ++F+++ ++V++WT++I + ALE F M G P+R+
Sbjct: 147 MYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRIT 206
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
++AC H + +G +L G E ++ +V++ + G L++A ++ M
Sbjct: 207 YATAISACAHVESMADG-KLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERM 265
Query: 636 PFPPNALIWRTFLEGCQR 653
P PN + W + C +
Sbjct: 266 PH-PNTVSWNAIVAACTQ 282
>gi|224080081|ref|XP_002306009.1| predicted protein [Populus trichocarpa]
gi|222848973|gb|EEE86520.1| predicted protein [Populus trichocarpa]
Length = 870
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 208/672 (30%), Positives = 358/672 (53%), Gaps = 26/672 (3%)
Query: 3 DRNVVSFNSIISAY--SRCGYVEDALRMFLYMINRGF-EPTQFTFGGLLS-CDSLNPV-E 57
DR+ + +N ++S Y SR Y + LR+F M + +P+ T +L C L V
Sbjct: 90 DRDPIFWNILLSGYAGSRV-YDAETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYM 148
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCL-DEVVSVFEDMPRKSLVTWNSIVSIF 116
G + +K+GL G AL+ +Y + G + + + F+ + K +V+WN+I+S F
Sbjct: 149 GRSVNCYAIKSGLD-THTLAGNALVSMYAKCGLVCQDAYAAFDSIDEKDVVSWNAIISGF 207
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL---EFGEQIHGLVIK-NGF 172
++ +ED LF +++ ++ ++ ++ ++ + FG++IHG V++ N
Sbjct: 208 AENNLMEDAFRLFSSMLKGQIKPNYTTLANILPVCASFDEYIAYWFGKEIHGYVLRHNEL 267
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
++ V N+LV+ Y + + AE +F+ +E+RD+VSWN II A + + KALEL+
Sbjct: 268 LADVFVWNALVSFYLRVGRVEEAELLFRRMELRDLVSWNAIIAGYASNGEWSKALELFHE 327
Query: 233 M-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC-DVFVGSALVDFYAKC 290
+ ++D++ P+ T + +I +CA +N +GK IH V+++ L C D VG+ALV FYAKC
Sbjct: 328 LLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRHPLLCEDTSVGNALVSFYAKC 387
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVL 349
D++EGA+ F IS ++++SWN+++ T L+ +L G P+ T V+
Sbjct: 388 DDIEGAYETFFMISRRDLISWNSMLDALVESGYNTWFLELLRWMLSEGTTPDSVTILSVV 447
Query: 350 RSSLAF----QLLQLHCLIIRM-----GYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
+ ++ + H IR ++ + +++ +YAK G I A +L+
Sbjct: 448 HFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIGNAILDAYAKCGNIEYASKVFQSLS 507
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
R +V I Y G +E +++ D+ WN+++ A N + L LF
Sbjct: 508 ENRNLVTFKAIISGYINCGLLDEAYITFNRMPSSDLSVWNLMVRLYAENDCSSQALGLFH 567
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
++A I PD T +SLL AC+++ ++ L HG ++ D + L D+Y KC
Sbjct: 568 ELQAHGIKPDAVTIMSLLPACAEMASVQLIKQCHGYAIRS--CFGDLHLDGALQDVYAKC 625
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
GSIG + K+F + ++++I +TA+I ++G + AL F M LG KPD V + VL
Sbjct: 626 GSIGYAFKLFQLIPNKDLIIFTAMIRGYAMHGMGKEALGTFFHMIELGIKPDHVIITTVL 685
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
+AC H GLV EG+ +F + + +G++ M+ Y CVVDLL R G + +A ++T MP N
Sbjct: 686 SACSHAGLVDEGLNIFYSIEKVHGMKLTMEQYSCVVDLLARGGRIDDAFSMVTGMPIEAN 745
Query: 641 ALIWRTFLEGCQ 652
A IW T L C+
Sbjct: 746 ANIWGTLLGACR 757
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/512 (26%), Positives = 252/512 (49%), Gaps = 40/512 (7%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV---EIRDVVSWNTI 213
+++G +HG +++ G V+ +L+NMY +C + ++K+F ++ RD + WN +
Sbjct: 40 IKWGRALHGSIVRIGHVSCHAVSKALLNMYAKCGALDESKKLFGEIGSCNDRDPIFWNIL 99
Query: 214 IGALAESENF-GKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
+ A S + + L L+ M + P+ T V+ CA L + +G+S++ IK+
Sbjct: 100 LSGYAGSRVYDAETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMGRSVNCYAIKS 159
Query: 272 ALECDVFVGSALVDFYAKCDNL-EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-L 329
L+ G+ALV YAKC + + A+ F I K++VSWNA+I G+A + F L
Sbjct: 160 GLDTHTLAGNALVSMYAKCGLVCQDAYAAFDSIDEKDVVSWNAIISGFAENNLMEDAFRL 219
Query: 330 LIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
+L+ +PN T +++L +F + G E + YVL + L+
Sbjct: 220 FSSMLKGQIKPNYTTLANILPVCASFD----EYIAYWFGKEIHGYVL-------RHNELL 268
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
+D + N + Y R G+ E L ++E D+VSWN +IA A N
Sbjct: 269 ADVFVW-------------NALVSFYLRVGRVEEAELLFRRMELRDLVSWNAIIAGYASN 315
Query: 450 GDYKEVLELF-KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
G++ + LELF + + I PD+ T + ++ AC++ NL +G +HG + + ++ DT
Sbjct: 316 GEWSKALELFHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRHPLLCEDTS 375
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V N L+ Y KC I + + F ++ R++I+W +++ AL +G+ LE R M G
Sbjct: 376 VGNALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYNTWFLELLRWMLSEG 435
Query: 569 FKPDRVALIAVLTACRH---GGLVREGMELFER---MNRSYGVEPEMDHYHCVVDLLVRY 622
PD V +++V+ C + V+E R + + VEP + + ++D +
Sbjct: 436 TTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIG--NAILDAYAKC 493
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEGCQRC 654
G+++ A K+ ++ N + ++ + G C
Sbjct: 494 GNIEYASKVFQSLSENRNLVTFKAIISGYINC 525
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 157/586 (26%), Positives = 263/586 (44%), Gaps = 77/586 (13%)
Query: 47 LLSCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-- 103
L SC L+ ++ G L S+++ G A V ALL +Y + G LDE +F ++
Sbjct: 31 LKSCAGLSAIKWGRALHGSIVRIGHVSCHA-VSKALLNMYAKCGALDESKKLFGEIGSCN 89
Query: 104 -KSLVTWNSIVSIF-GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL-SNEQDLEFG 160
+ + WN ++S + G + + + LF E+ + S ++ + + D+ G
Sbjct: 90 DRDPIFWNILLSGYAGSRVYDAETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMG 149
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGI-WSAEKMFKDVEIRDVVSWNTIIGALAE 219
++ IK+G D L N+LV+MY +C + A F ++ +DVVSWN II AE
Sbjct: 150 RSVNCYAIKSGLDTHTLAGNALVSMYAKCGLVCQDAYAAFDSIDEKDVVSWNAIISGFAE 209
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI---LGKSIHAKVIK-NALEC 275
+ A L+ M + PN TT ++ CA I GK IH V++ N L
Sbjct: 210 NNLMEDAFRLFSSMLKGQIKPNYTTLANILPVCASFDEYIAYWFGKEIHGYVLRHNELLA 269
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELL 334
DVFV +ALV FY + +E A L F + +++VSWNA+I GYAS ++ L ELL
Sbjct: 270 DVFVWNALVSFYLRVGRVEEAELLFRRMELRDLVSWNAIIAGYASNGEWSKALELFHELL 329
Query: 335 QLGY-RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
L P+ T ++ + Q LH +G + YVL + L+ +
Sbjct: 330 TLDMIEPDSVTLLCIIPACA--QSRNLH-----VGKMIHGYVL--------RHPLLCEDT 374
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
+ N + Y + + + R D++SWN ++ A +G
Sbjct: 375 SV------------GNALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYNT 422
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS----DTFV 509
LEL ++M + PD+ T +S++ C + H + +++S + +
Sbjct: 423 WFLELLRWMLSEGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTI 482
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTD-RNVITWTALISAL---GL--------------- 550
N ++D Y KCG+I + K+F +++ RN++T+ A+IS GL
Sbjct: 483 GNAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGYINCGLLDEAYITFNRMPSSD 542
Query: 551 -------------NGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
N + +AL F E++ G KPD V ++++L AC
Sbjct: 543 LSVWNLMVRLYAENDCSSQALGLFHELQAHGIKPDAVTIMSLLPAC 588
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 160/352 (45%), Gaps = 49/352 (13%)
Query: 248 VINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCDNLEGAHLCFSEI--- 303
++ SCAGL G+++H +++ + C V AL++ YAKC L+ + F EI
Sbjct: 30 ILKSCAGLSAIKWGRALHGSIVRIGHVSCHA-VSKALLNMYAKCGALDESKKLFGEIGSC 88
Query: 304 SNKNIVSWNALILGYASKS--SPTSIFLLIELLQLGY-RPNEFTFSHVL----RSSLAFQ 356
++++ + WN L+ GYA ++ L E+ Y +P+ T + VL R +
Sbjct: 89 NDRDPIFWNILLSGYAGSRVYDAETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYM 148
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI-SDALAFVTALNIPRAVVPANIIAGIY 415
++C I+ G + + +L++ YAK GL+ DA A
Sbjct: 149 GRSVNCYAIKSGLDTHTLAGNALVSMYAKCGLVCQDAYA--------------------- 187
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
++ D+VSWN +I+ A N ++ LF M +I P+ T
Sbjct: 188 -----------AFDSIDEKDVVSWNAIISGFAENNLMEDAFRLFSSMLKGQIKPNYTTLA 236
Query: 476 SLLSACSKLCNLA---LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
++L C+ G +HG + + + +D FV N L+ Y + G + + +F
Sbjct: 237 NILPVCASFDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSFYLRVGRVEEAELLFRR 296
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF-KPDRVALIAVLTAC 583
M R++++W A+I+ NG +ALE F E+ L +PD V L+ ++ AC
Sbjct: 297 MELRDLVSWNAIIAGYASNGEWSKALELFHELLTLDMIEPDSVTLLCIIPAC 348
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 85/192 (44%), Gaps = 28/192 (14%)
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
P + +WN +I+ C NGD+++ D S+L +C+ L + G +L
Sbjct: 4 PYLKAWNTMISDC--NGDFRQ---------------DYQAVASILKSCAGLSAIKWGRAL 46
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM---TDRNVITWTALISAL-G 549
HG I + +S V L++MY KCG++ S K+F E+ DR+ I W L+S G
Sbjct: 47 HGSIVRIGHVSCHA-VSKALLNMYAKCGALDESKKLFGEIGSCNDRDPIFWNILLSGYAG 105
Query: 550 LNGFAQRALEKFREMEFLGF-KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
+ L FREM + KP V VL C G V G R Y ++
Sbjct: 106 SRVYDAETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMG-----RSVNCYAIKSG 160
Query: 609 MDHYHCVVDLLV 620
+D + + LV
Sbjct: 161 LDTHTLAGNALV 172
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 195/659 (29%), Positives = 336/659 (50%), Gaps = 45/659 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-----CDSLNPV 56
PDR+ S+ S++ +SR G ++A R+FL + + G E F +L CD L
Sbjct: 58 PDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELF-- 115
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G QL +K G F D VGT+L+ Y + + +VF++M +++VTW +++S +
Sbjct: 116 -GRQLHCQCIKFG-FLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGY 173
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ E+ + LF + +F + L+ E G Q+H +V+KNG D +
Sbjct: 174 ARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 233
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V+NSL+N+Y +C + A +F E++ VV+WN++I A + +AL ++ M ++
Sbjct: 234 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 293
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V ++++F +I CA L+ + +H V+K D + +AL+ Y+KC + A
Sbjct: 294 HVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDA 353
Query: 297 HLCFSEISN-KNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
F E N+VSW A+I G+ + ++ L E+ + G RPNEFT+S +L +
Sbjct: 354 LRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPV 413
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
++H +++ YE V +L+ +Y K G + +A A + +GI
Sbjct: 414 ISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEA---------------AKVFSGI 458
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
N+ DIV+W+ ++A A G+ + +++F + + P+ +TF
Sbjct: 459 DNK-----------------DIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTF 501
Query: 475 VSLLSAC-SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
S+L+ C + ++ G HG K+ + SS V + L+ MY K G I S+ ++F
Sbjct: 502 SSILNVCAATTASMGQGKQFHGFAIKSRLDSS-LCVSSALLTMYAKKGHIESAEEVFKRQ 560
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++++++W ++IS +G A +AL+ F+EM+ K D V I V AC H GLV EG
Sbjct: 561 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGE 620
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F+ M R + P +H C+VDL R G L++A K+I MP + IWRT L C+
Sbjct: 621 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACR 679
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 160/557 (28%), Positives = 284/557 (50%), Gaps = 47/557 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
M +RNVV++ ++IS Y+R E+ L +F+ M + G +P FTF L + V G
Sbjct: 158 MKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRG 217
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ V+KNGL V +L+ LY + G + + +F+ KS+VTWNS++S +
Sbjct: 218 LQVHTVVVKNGL-DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 276
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + +F + + V L+ESSF +I +N ++L F EQ+H V+K GF ++ +
Sbjct: 277 NGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNI 336
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+L+ Y +C + A ++FK+ + +VVSW +I +++ +A+ L+ M
Sbjct: 337 RTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKG 396
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN+ T+ ++ + + S +HA+V+K E VG+AL+D Y K ++ A
Sbjct: 397 VRPNEFTYSVILTALPVISPS----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAA 452
Query: 298 LCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF- 355
FS I NK+IV+W+A++ GYA + + +I + EL + G +PNEFTFS +L A
Sbjct: 453 KVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATT 512
Query: 356 ----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
Q Q H I+ ++ V +L+T YAK G I A
Sbjct: 513 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESA------------------- 553
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++ R Q E+ D+VSWN +I+ A +G + L++FK M+ ++ D+
Sbjct: 554 EEVFKR------------QREK-DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDS 600
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+ + +AC+ + G ++ + I+ + ++D+Y + G + ++K+ +
Sbjct: 601 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVID 660
Query: 532 EMTDRNVIT-WTALISA 547
M + T W +++A
Sbjct: 661 NMPNLAGSTIWRTILAA 677
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/564 (23%), Positives = 259/564 (45%), Gaps = 50/564 (8%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
++F+ P + ++ S++ F + G ++ LF + + + S F V+ +
Sbjct: 52 NLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLC 111
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
D FG Q+H IK GF ++ V SLV+ Y + + +F +++ R+VV+W T+I
Sbjct: 112 DELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLIS 171
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
A + + L L++RM + PN TF + A G +H V+KN L+
Sbjct: 172 GYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDK 231
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
+ V ++L++ Y KC N+ A + F + K++V+WN++I GYA+ + ++
Sbjct: 232 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 291
Query: 336 LGY-RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
L + R +E +F+ +++ + L QLHC +++ G+ + + +LM +Y+K +
Sbjct: 292 LNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAML 351
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
DAL ++ TG ++VSW +I+ N
Sbjct: 352 DALR-------------------LFKETGFLG------------NVVSWTAMISGFLQND 380
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
+E + LF M+ + P+ +T+ +L+A + S +H + KT S T V
Sbjct: 381 GKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVIS----PSEVHAQVVKTNYERSST-VG 435
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
L+D Y K G + + K+F+ + +++++ W+A+++ G + A++ F E+ G K
Sbjct: 436 TALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVK 495
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV----RYGHLK 626
P+ ++L C + F + ++ +D CV L+ + GH++
Sbjct: 496 PNEFTFSSILNVCAATTASMGQGKQFH----GFAIKSRLDSSLCVSSALLTMYAKKGHIE 551
Query: 627 EAEKIITTMPFPPNALIWRTFLEG 650
AE++ + + W + + G
Sbjct: 552 SAEEVFKRQR-EKDLVSWNSMISG 574
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 207/664 (31%), Positives = 336/664 (50%), Gaps = 45/664 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG--A 59
+N VS+NSIIS YS+ G A R+F M G PT++TFG L++ C P
Sbjct: 169 KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE 228
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ ++ K+GL D FVG+ L+ + + G L VF M ++ VT N ++ +
Sbjct: 229 QIMCTIQKSGLL-TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQ 287
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVI-----HGLSNEQDLEFGEQIHGLVIKNGF-D 173
+ E+ LF ++ S + ++ S+V ++ + L+ E L+ G ++HG VI G D
Sbjct: 288 KWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVD 346
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ + + N LVNMY +C I A ++F + +D VSWN++I L ++ F +A+E Y M
Sbjct: 347 FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ P T + ++SCA L+ + LG+ IH + +K ++ +V V +AL+ YA+ L
Sbjct: 407 RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYL 466
Query: 294 EGAHLCFSEISNKNIVSWNALI--LGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
FS + + VSWN++I L + +S P ++ + + G + N TFS VL +
Sbjct: 467 NECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSA 526
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ +L I + +N NI N +
Sbjct: 527 VSSLSFGELGKQIHGLALKN----------------------------NIADEATTENAL 558
Query: 412 AGIYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
Y + G+ + K+ S++ ER D V+WN +I+ HN + L+L +M D
Sbjct: 559 IACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLD 618
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
++ + ++LSA + + L G +H + + SD V + L+DMY KCG + +++ F
Sbjct: 619 SFMYATVLSAFASVATLERGMEVHACSVRA-CLESDVVVGSALVDMYSKCGRLDYALRFF 677
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG-FKPDRVALIAVLTACRHGGLV 589
N M RN +W ++IS +G + AL+ F M+ G PD V + VL+AC H GL+
Sbjct: 678 NTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLL 737
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG + FE M+ SYG+ P ++H+ C+ D+L R G L + E I MP PN LIWRT L
Sbjct: 738 EEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLG 797
Query: 650 GCQR 653
C R
Sbjct: 798 ACCR 801
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 185/675 (27%), Positives = 300/675 (44%), Gaps = 61/675 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-- 57
MP RN VS+ I+S YSR G ++AL M+ G Q+ F +L +C + V
Sbjct: 62 MPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGIL 121
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRH-GCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G Q+ + K + DA V L+ +Y + G + + F D+ K+ V+WNSI+S+
Sbjct: 122 FGRQIHGLMFKLS-YAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISV 180
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN--EQDLEFGEQIHGLVIKNGFD 173
+ + G +F + TE +F ++ + E D+ EQI + K+G
Sbjct: 181 YSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLL 240
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+L V + LV+ + + + A K+F +E R+ V+ N ++ L + +A +L++ M
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Query: 234 SVDIVFPNQTTFV-------YVINSCAGLQNSILGKSIHAKVIKNAL-ECDVFVGSALVD 285
+ I ++ + Y + GL+ G+ +H VI L + V +G+ LV+
Sbjct: 301 NSMIDVSPESYVILLSSFPEYSLAEEVGLKK---GREVHGHVITTGLVDFMVGIGNGLVN 357
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFT 344
YAKC ++ A F +++K+ VSWN++I G ++ + + P FT
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT 417
Query: 345 FSHVLRS--SLAFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
L S SL + L Q+H +++G + V +LMT YA+
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE--------------- 462
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN-GDYKEVLELF 459
TG NE K+ S + D VSWN +I A A + E + F
Sbjct: 463 -----------------TGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF 505
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
+ A + TF S+LSA S L LG +HGL K I T N LI YGK
Sbjct: 506 LNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEAT-TENALIACYGK 564
Query: 520 CGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
CG + KIF+ M + R+ +TW ++IS N +AL+ M G + D
Sbjct: 565 CGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYAT 624
Query: 579 VLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFP 638
VL+A + GME+ R+ +E ++ +VD+ + G L A + TMP
Sbjct: 625 VLSAFASVATLERGMEVHACSVRAC-LESDVVVGSALVDMYSKCGRLDYALRFFNTMPV- 682
Query: 639 PNALIWRTFLEGCQR 653
N+ W + + G R
Sbjct: 683 RNSYSWNSMISGYAR 697
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 236/500 (47%), Gaps = 40/500 (8%)
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H + KN D ++ + N+L+N Y + SA K+F ++ +R+ VSW I+ + +
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCA--GLQNSILGKSIHAKVIKNALECDVFVGS 281
+AL M + +F NQ FV V+ +C G + G+ IH + K + D V +
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 282 ALVDFYAKCDNLEGAHLC-FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYR 339
L+ Y KC G LC F +I KN VSWN++I Y+ S F + +Q G R
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 340 PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
P E+TF ++ ++ + E +L +M + KSGL++D L
Sbjct: 204 PTEYTFGSLVTTACSLT-------------EPDVRLLEQIMCTIQKSGLLTD-------L 243
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ +V A + ++G + K+ +Q+E + V+ N ++ +E +LF
Sbjct: 244 FVGSGLVSA------FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF 297
Query: 460 KYMRAA-RIYPDNYTFVSLLSA-----CSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
M + + P++Y V LLS+ ++ L G +HG + T ++ + N L
Sbjct: 298 MDMNSMIDVSPESY--VILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGL 355
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
++MY KCGSI + ++F MTD++ ++W ++I+ L NG A+E+++ M P
Sbjct: 356 VNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGS 415
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
LI+ L++C + G ++ + G++ + + ++ L G+L E KI +
Sbjct: 416 FTLISSLSSCASLKWAKLGQQIHGE-SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFS 474
Query: 634 TMPFPPNALIWRTFLEGCQR 653
+MP + + W + + R
Sbjct: 475 SMP-EHDQVSWNSIIGALAR 493
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 146/589 (24%), Positives = 276/589 (46%), Gaps = 42/589 (7%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D ++ L+ Y G VF++MP ++ V+W IVS + ++G ++ + ++V
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 134 RSEVALTESSFVGVIHGLSN--EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
+ + + +FV V+ + FG QIHGL+ K + + +V+N L++MY++C G
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 192 -IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
+ A F D+E+++ VSWN+II +++ + A ++ M D P + TF ++
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT 214
Query: 251 SCAGLQ--NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+ L + L + I + K+ L D+FVGS LV +AK +L A F+++ +N
Sbjct: 215 TACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNA 274
Query: 309 VSWNALILGYASKS---SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLII 365
V+ N L++G + T +F+ + + + P + +L SS + L
Sbjct: 275 VTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYV---ILLSSFP-----EYSLAE 325
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
+G + V G ++T +GL+ F+ + N + +Y + G +
Sbjct: 326 EVGLKKGREVHGHVIT----TGLVD----FMVGI--------GNGLVNMYAKCGSIADAR 369
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
++ + D VSWN +I NG + E +E +K MR I P ++T +S LS+C+ L
Sbjct: 370 RVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLK 429
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
LG +HG K I + V N L+ +Y + G + KIF+ M + + ++W ++I
Sbjct: 430 WAKLGQQIHGESLKLG-IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII 488
Query: 546 SALGLNGFAQRALEK----FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
AL ++R+L + F + G K +R+ +VL+A G ++ +
Sbjct: 489 GALAR---SERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI-HGLAL 544
Query: 602 SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ E + ++ + G + EKI + M + + W + + G
Sbjct: 545 KNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 217/463 (46%), Gaps = 36/463 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
M D++ VS+NS+I+ + G +A+ + M P FT L SC SL + G
Sbjct: 375 MTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG 434
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ LK G+ + V AL+ LY G L+E +F MP V+WNSI+ +
Sbjct: 435 QQIHGESLKLGIDL-NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR 493
Query: 119 -HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + + F R+ L +F V+ +S+ E G+QIHGL +KN E
Sbjct: 494 SERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEAT 553
Query: 178 VANSLVNMYFQCAGIWSAEKMF-KDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
N+L+ Y +C + EK+F + E RD V+WN++I +E KAL+L M
Sbjct: 554 TENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQT 613
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ + V+++ A + G +HA ++ LE DV VGSALVD Y+KC L+ A
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYA 673
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR--PNEFTFSHVLRSSLA 354
F+ + +N SWN++I GYA L E ++L + P+ TF VL +
Sbjct: 674 LRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACS- 732
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
H ++ G++++E S+ SY + PR + + +A +
Sbjct: 733 ------HAGLLEEGFKHFE----SMSDSYGLA---------------PR-IEHFSCMADV 766
Query: 415 YNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAH-NGDYKEV 455
R G+ ++ + ++ +P+++ W V+ AC NG E+
Sbjct: 767 LGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAEL 809
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 204/669 (30%), Positives = 337/669 (50%), Gaps = 53/669 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE----PTQFTFGGLL----SCDSLNP 55
RN V++NSIIS Y R G A ++F M G E P ++T L+ S
Sbjct: 308 RNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGL 367
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
V Q+ + K+G F D +VG+AL+ + R+G +D +F+ M ++ VT N ++
Sbjct: 368 VLLEQMLTRIEKSG-FLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVG 426
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLE----FGEQIHGLVIKNG 171
+ E+ +F E+ + V + S V ++ + +L+ G+++H + ++G
Sbjct: 427 LARQHQGEEAAKVFKEM-KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSG 485
Query: 172 F-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
D + + N+LVNMY +C I +A +F+ + +D VSWN++I L +E F +A+ +
Sbjct: 486 LVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCF 545
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
M + + P+ + + ++SC+ L LG+ IH + K L+ DV V +AL+ YA+
Sbjct: 546 HTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAET 605
Query: 291 DNLEGAHLCFSEISNKNIVSWNALI--LGYASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
D++ F ++ + VSWN+ I L S ++ +E++Q G+RPN TF ++
Sbjct: 606 DSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINI 665
Query: 349 LRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
L + +F +L Q+H LI++ + + +L+ Y K + D + ++
Sbjct: 666 LAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMS---- 721
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
ER D VSWN +I+ H+G + ++L M
Sbjct: 722 ---------------------------ERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQ 754
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
D +TF ++LSAC+ + L G +H + + SD V + L+DMY KCG I
Sbjct: 755 RGQKLDGFTFATVLSACASVATLERGMEVHACAVRA-CLESDVVVGSALVDMYAKCGKID 813
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
+ + F M RN+ +W ++IS +G Q+AL+ F M+ G PD V + VL+AC
Sbjct: 814 YASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACS 873
Query: 585 HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
H GLV EG + F+ M YG+ P ++H+ C+VDLL R G +K+ E I TMP PN LIW
Sbjct: 874 HVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIW 933
Query: 645 RTFLEGCQR 653
RT L C R
Sbjct: 934 RTVLGACCR 942
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 177/673 (26%), Positives = 306/673 (45%), Gaps = 54/673 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL----SCDSLNPV 56
MP +N+VS++ +IS Y++ ++A +F +I+ G P F G L C S
Sbjct: 201 MPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIK 260
Query: 57 EGAQLQASVLKNGLFC-ADAFVGTALLGLYGR-HGCLDEVVSVFEDMPRKSLVTWNSIVS 114
G Q+ A + K L C +D + L+ +Y G +D+ VF+++ ++ VTWNSI+S
Sbjct: 261 LGMQIHAFICK--LPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIIS 318
Query: 115 IFGKHGFVEDCMFLFCELVRSEVAL----TESSFVGVIHGLSNEQD--LEFGEQIHGLVI 168
++ + G LF + V L E + ++ + D L EQ+ +
Sbjct: 319 VYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIE 378
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
K+GF +L V ++LVN + + + A+ +FK + R+ V+ N ++ LA +A +
Sbjct: 379 KSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAK 438
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK----SIHAKVIKNAL-ECDVFVGSAL 283
++ M D+V N + V ++++ N GK +HA + ++ L + + +G+AL
Sbjct: 439 VFKEMK-DLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNAL 497
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNE 342
V+ Y KC ++ A F + +K+ VSWN++I G ++ + + G P+
Sbjct: 498 VNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSN 557
Query: 343 FTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
F+ L S + L L I G+ K GL D
Sbjct: 558 FSVISTLSSCSSLGWLTLGRQIHGEGF---------------KWGLDLD----------- 591
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA-HNGDYKEVLELFKY 461
V +N + +Y T NE K+ Q+ D VSWN I A A + + L+ F
Sbjct: 592 --VSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLE 649
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M A P+ TF+++L+A S L LG +H LI K ++ D + N L+ YGKC
Sbjct: 650 MMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYS-VADDNAIENALLAFYGKCE 708
Query: 522 SIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
+ IF+ M++ R+ ++W ++IS +G +A++ M G K D VL
Sbjct: 709 QMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVL 768
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
+AC + GME+ R+ +E ++ +VD+ + G + A + MP N
Sbjct: 769 SACASVATLERGMEVHACAVRAC-LESDVVVGSALVDMYAKCGKIDYASRFFELMPV-RN 826
Query: 641 ALIWRTFLEGCQR 653
W + + G R
Sbjct: 827 IYSWNSMISGYAR 839
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 140/604 (23%), Positives = 282/604 (46%), Gaps = 36/604 (5%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ L + K G F D F L+ +Y R G L +F++MP+K+LV+W+ ++S +
Sbjct: 158 DANHLHLQLYKTG-FTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGY 216
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN--EQDLEFGEQIHGLVIKNGFDY 174
++ ++ LF ++ S + + + ++ G QIH + K
Sbjct: 217 TQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVS 276
Query: 175 ELLVANSLVNMYFQCAG-IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+++++N L++MY C+G I A ++F +++ R+ V+WN+II + A +L+ M
Sbjct: 277 DMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVM 336
Query: 234 SVDIV----FPNQTTFVYVINSCAGLQNS--ILGKSIHAKVIKNALECDVFVGSALVDFY 287
++ V PN+ T ++ + L + +L + + ++ K+ D++VGSALV+ +
Sbjct: 337 QMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGF 396
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSH 347
A+ ++ A + F ++ ++N V+ N L++G A + + + ++ N +
Sbjct: 397 ARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVV 456
Query: 348 VLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+L + F L+ R G E + Y+ +SGL+ ++
Sbjct: 457 LLSTFTEFSNLKEG---KRKGQEVHAYLF--------RSGLVDARISI------------ 493
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
N + +Y + + + + D VSWN +I+ HN ++E + F M+ +
Sbjct: 494 GNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGM 553
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P N++ +S LS+CS L L LG +HG K + D V N L+ +Y + SI
Sbjct: 554 VPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWG-LDLDVSVSNALLTLYAETDSINECQ 612
Query: 528 KIFNEMTDRNVITWTALISALG-LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
K+F +M + + ++W + I AL +AL+ F EM G++P+RV I +L A
Sbjct: 613 KVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSF 672
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
++ G ++ + + Y V + + ++ + +++ E I + M + + W +
Sbjct: 673 SVLGLGHQIHALILK-YSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNS 731
Query: 647 FLEG 650
+ G
Sbjct: 732 MISG 735
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 230/492 (46%), Gaps = 30/492 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFT-FGGLLSCDSLNPVE-G 58
MP ++ VS+NS+IS E+A+ F M G P+ F+ L SC SL + G
Sbjct: 517 MPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLG 576
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ K GL D V ALL LY ++E VF MP V+WNS + K
Sbjct: 577 RQIHGEGFKWGLDL-DVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAK 635
Query: 119 H-GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ V + F E++++ +F+ ++ +S+ L G QIH L++K +
Sbjct: 636 YEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNA 695
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ N+L+ Y +C + E +F + E RD VSWN++I S KA++L M
Sbjct: 696 IENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQR 755
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ TF V+++CA + G +HA ++ LE DV VGSALVD YAKC ++ A
Sbjct: 756 GQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYA 815
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F + +NI SWN++I GYA ++ + + Q G P+ TF VL +
Sbjct: 816 SRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACS-- 873
Query: 356 QLLQLHCLIIRMGYENYE-----YVLGSLMTSYA-------KSGLISDALAFVTALNI-P 402
H ++ GY++++ Y L + ++ ++G + F+ + + P
Sbjct: 874 -----HVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDP 928
Query: 403 RAVVPANIIAGIYNRTGQYNE----TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
++ ++ G+ E K+L +LE + V++ ++ A G++++V+E
Sbjct: 929 NILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEA 988
Query: 459 FKYMRAARIYPD 470
MR A + D
Sbjct: 989 RLAMRKAAVKKD 1000
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 138/322 (42%), Gaps = 34/322 (10%)
Query: 342 EFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
+TFSH QL QL R + Y L K+G D
Sbjct: 132 HYTFSHS-------QLQQLDSEFDRYKTSSSLYDANHLHLQLYKTGFTDD---------- 174
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
V N + IY R G KL ++ + ++VSW+ +I+ N E LFK
Sbjct: 175 ---VFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKG 231
Query: 462 MRAARIYPDNYTFVSLLSACSKL--CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
+ ++ + P+++ S L AC + + LG +H I K + SD + N+L+ MY
Sbjct: 232 VISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCV-SDMILSNVLMSMYSD 290
Query: 520 C-GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF----LGFKPDRV 574
C GSI + ++F+E+ RN +TW ++IS G A A + F M+ L +P+
Sbjct: 291 CSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEY 350
Query: 575 ALIAVLTACRHGGLVREGMELFERM---NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
L +++TA L G+ L E+M G ++ +V+ RYG L + K+
Sbjct: 351 TLCSLVTAA--CSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYG-LMDCAKM 407
Query: 632 ITTMPFPPNALIWRTFLEGCQR 653
I + NA+ + G R
Sbjct: 408 IFKQMYDRNAVTMNGLMVGLAR 429
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 22/172 (12%)
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV--------SLLSACSKLCNLALGS 491
N +A C D+ E+ +MR Y YTF+ L S+ S
Sbjct: 100 NTCVAGC----DFPEMASHL-FMRLLNKYNSTYTFLRHYTFSHSQLQQLDSEFDRYKTSS 154
Query: 492 SL------HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
SL H + KT + D F CN LI++Y + G++ S+ K+F+EM +N+++W+ LI
Sbjct: 155 SLYDANHLHLQLYKTGF-TDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLI 213
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL--VREGMEL 595
S N A F+ + G P+ A+ + L AC+ G ++ GM++
Sbjct: 214 SGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQI 265
>gi|302788580|ref|XP_002976059.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
gi|300156335|gb|EFJ22964.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
Length = 699
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 200/661 (30%), Positives = 336/661 (50%), Gaps = 42/661 (6%)
Query: 32 MINRGFEPTQFTF-GGLLSCDSLNPVEGAQ-LQASVLKNGLFCADAFVGTALLGLYGRHG 89
M+ G P +F L SC + + + + V+++GL + VG AL+ +YG+ G
Sbjct: 1 MLLHGLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQIS-VGNALVNMYGKCG 59
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES-SFVGVI 148
L VF+ M + +++WN++++ + + G ++ M LF + +S +FV V+
Sbjct: 60 SLALAREVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVV 119
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGF-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD- 206
+ LE +I LV + G D ++++ N+LVNMY +C + SA +F+ ++IRD
Sbjct: 120 SACCDPSALEAANRIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDD 179
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVD-IVFPNQTTFVYVINSCAGLQNSILGKSIH 265
VV W T+I A+ ALEL+ +M + + P+ T + +C G + G+ IH
Sbjct: 180 VVLWTTMISVYAQDGYSEAALELFQQMEKEEALLPDGFTLASALAACTGPEMLEEGREIH 239
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT 325
A VI+ E ++ VG+ALV YA C L+ A CF +++ +N+VSWNA+I Y +
Sbjct: 240 ALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDK 299
Query: 326 SIFLLIELLQL-GYRPNEFTFSHVL---RSSLAFQLLQLHCLIIRMGYENYEYVLG-SLM 380
F + +QL G +PN TF L + AF+ + L + E+ + ++G +L+
Sbjct: 300 EAFRIFYQMQLEGVQPNSVTFVTFLSTCSTPAAFEDGLIRALEVEKRVESLDALVGNALL 359
Query: 381 TSYAKSGLISDALAFVTALNIPR-------AVVPANI----------------------I 411
+YAK G + + + R AV+ ++ +
Sbjct: 360 HTYAKLGKLDEVQRVFQRMEKQRDDVVTWNAVIEGSVRNGEFRNALELMPQKNLGSWNGL 419
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
G Y G+ +T KL ++E D+++WN+++ A KE + LF+ M A P++
Sbjct: 420 LGAYIHVGRLADTRKLFEEMEERDVITWNMILGAYVERDMAKEAVRLFRRMIAEGTEPNS 479
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
T+ ++L AC+ +LA G +H LI + S+ FV N L+DM+GKC S+G + + F
Sbjct: 480 ITWTTMLGACAGEASLAEGRRVHELIAERG-ADSELFVGNALVDMFGKCASLGGARQAFE 538
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ ++ +W L++AL NG A+ AL++F M+ G KP V I V AC H G + +
Sbjct: 539 RIRAKDASSWNVLVAALAQNGDAEEALKQFLRMQREGIKPTDVTFIVVFWACSHAGRLEQ 598
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+F + YG+ P HY + DLL R G L EAE++I +PF + L W T L C
Sbjct: 599 AKTIFASLRHDYGIAPLPSHYSGMTDLLGRAGFLDEAEEVIKRIPFSRDELPWMTLLSAC 658
Query: 652 Q 652
+
Sbjct: 659 K 659
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/596 (24%), Positives = 274/596 (45%), Gaps = 40/596 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLLS--CDSLNPVE 57
M R+V+S+N++I+AY++ G+ ++A+ +F M G EP TF ++S CD
Sbjct: 71 MDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSALEA 130
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIF 116
++ A V + GL +D +G AL+ +Y + G L VFE M R +V W +++S++
Sbjct: 131 ANRIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDDVVLWTTMISVY 190
Query: 117 GKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ G+ E + LF ++ + E L + + + + + LE G +IH LVI+ G + E
Sbjct: 191 AQDGYSEAALELFQQMEKEEALLPDGFTLASALAACTGPEMLEEGREIHALVIERGCESE 250
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L+V N+LV+MY C + A + F+ + R+VVSWN +I A +A ++ +M +
Sbjct: 251 LVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFYQMQL 310
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ V PN TFV +++C+ G +V K D VG+AL+ YAK L+
Sbjct: 311 EGVQPNSVTFVTFLSTCSTPAAFEDGLIRALEVEKRVESLDALVGNALLHTYAKLGKLDE 370
Query: 296 AHLCFSEISNK--NIVSWNALILGYASKSSPTSIFLLIELLQLGY--------------- 338
F + + ++V+WNA+I G + L+ LG
Sbjct: 371 VQRVFQRMEKQRDDVVTWNAVIEGSVRNGEFRNALELMPQKNLGSWNGLLGAYIHVGRLA 430
Query: 339 ----------RPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
+ T++ +L +A + ++L +I G E +++ + A
Sbjct: 431 DTRKLFEEMEERDVITWNMILGAYVERDMAKEAVRLFRRMIAEGTEPNSITWTTMLGACA 490
Query: 385 KSGLISDAL---AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
+++ + + N + ++ + + ++ D SWN+
Sbjct: 491 GEASLAEGRRVHELIAERGADSELFVGNALVDMFGKCASLGGARQAFERIRAKDASSWNV 550
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
++AA A NGD +E L+ F M+ I P + TF+ + ACS L ++ ++
Sbjct: 551 LVAALAQNGDAEEALKQFLRMQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFASLRHDY 610
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQR 556
I+ + + D+ G+ G + + ++ + R+ + W L+SA ++G +R
Sbjct: 611 GIAPLPSHYSGMTDLLGRAGFLDEAEEVIKRIPFSRDELPWMTLLSACKVHGDVER 666
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 201/452 (44%), Gaps = 62/452 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M RNVVS+N++I+AY ++A R+F M G +P TF LS C + E
Sbjct: 277 MAQRNVVSWNAMIAAYVHHNCDKEAFRIFYQMQLEGVQPNSVTFVTFLSTCSTPAAFEDG 336
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP--RKSLVTWNSIVSIFG 117
++A ++ + DA VG ALL Y + G LDEV VF+ M R +VTWN+++
Sbjct: 337 LIRALEVEKRVESLDALVGNALLHTYAKLGKLDEVQRVFQRMEKQRDDVVTWNAVIEGSV 396
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G EF + + KN L
Sbjct: 397 RNG-------------------------------------EFRNALELMPQKN-----LG 414
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
N L+ Y + K+F+++E RDV++WN I+GA E + +A+ L+ RM +
Sbjct: 415 SWNGLLGAYIHVGRLADTRKLFEEMEERDVITWNMILGAYVERDMAKEAVRLFRRMIAEG 474
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN T+ ++ +CAG + G+ +H + + + ++FVG+ALVD + KC +L GA
Sbjct: 475 TEPNSITWTTMLGACAGEASLAEGRRVHELIAERGADSELFVGNALVDMFGKCASLGGAR 534
Query: 298 LCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAF 355
F I K+ SWN L+ A + ++ + + + G +P + TF V + S A
Sbjct: 535 QAFERIRAKDASSWNVLVAALAQNGDAEEALKQFLRMQREGIKPTDVTFIVVFWACSHAG 594
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYA-------KSGLISDALAFVTALNIPRAVVPA 408
+L Q + + ++Y + L + Y+ ++G + +A + + R +P
Sbjct: 595 RLEQAKTIFASL---RHDYGIAPLPSHYSGMTDLLGRAGFLDEAEEVIKRIPFSRDELPW 651
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
+ G K+ Q+ R WN
Sbjct: 652 MTLLSACKVHGDVERGRKVAGQVLR-----WN 678
>gi|302785117|ref|XP_002974330.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
gi|300157928|gb|EFJ24552.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
Length = 720
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 189/668 (28%), Positives = 345/668 (51%), Gaps = 54/668 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL------SCDSLN 54
M R+ VS+N++I+ Y+R G+ E+A+ +F M G P ++T L SC
Sbjct: 55 MTVRDSVSWNTMIATYARNGFGEEAVEVFHEMALVGIPPDKYTLISALDGCCGLSCPDRG 114
Query: 55 PVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+G ++ + G F +D + T L+ +YG+ G + E +F+ M R+ +TW +++
Sbjct: 115 LKKGREIHRRIQSIG-FMSDVALQTGLIKMYGKFGEVIEARRLFDGMSRRVALTWARMIT 173
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+G++GF + + L+ ++ +V + F V+ S+ +LE G++IH +++ F+
Sbjct: 174 AYGQNGFGNEAIELYKQI---DVVPDKVIFASVLDACSSAMNLEEGKRIHARIVEGKFEI 230
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEI--RDVVSWNTIIGALAESENFGKALELYLR 232
+ +V N+L+++Y C + A+ +F ++ RDVVSWN+II A ++ +AL L+
Sbjct: 231 DTVVNNTLLDLYGMCGCLEEAKAVFHSMQEQGRDVVSWNSIIRAHLHNDQPKEALGLFFE 290
Query: 233 MSVDIVFPNQTTFVYV--INSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYA 288
M + P Q YV +++C+ + + L GK++H ++ N + DV+VG+ALV Y
Sbjct: 291 MQ-EACGPRQDRVSYVSALDACSAMGSDGLVHGKTLHGLILANRIHIDVYVGTALVTMYG 349
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSH 347
+C ++ A F + +KN V+W ++I GY++ + ++ + ++ Q G R ++ +
Sbjct: 350 RCGDVVEAKQVFDVMPSKNAVTWTSMIRGYSTNGFAREAVEVFQKMEQEGCRADKIVYVA 409
Query: 348 VLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
V+ +S + +++ H + +G+ + + SL+ + K G + A A+
Sbjct: 410 VMEASRGVEDVKMAAKIHSRLSELGWCSDSAIQSSLIAMHGKCGSVEAARRVFDAMEEKS 469
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
PA WN +IAA + GD + VLELF+ M+
Sbjct: 470 RGSPA------------------------------WNAMIAAYSRRGDKEAVLELFQAMQ 499
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
AA + PD TF+ LL+ + H ++ + +D+ V L++ + G +
Sbjct: 500 AASVRPDRATFLGLLAVGGSFSPSEASAVQHAILSTG--METDSLVGTALLNTLTRSGKV 557
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
G + ++F+ + R+V++WT+++ A +G + A++ F+EM+ G +PD VA +AVL AC
Sbjct: 558 GEARRVFDRLDKRDVVSWTSMMVAYASHGSSLEAIDLFQEMQLQGMEPDEVAFLAVLFAC 617
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
H G R G + F M Y +E DHY CVVDLL R G L +AE +I +MPF P+
Sbjct: 618 NHAGFFRRGWDYFASMRGDYDLEAGADHYCCVVDLLGRAGRLADAEDLIVSMPFKPDEAT 677
Query: 644 WRTFLEGC 651
W + C
Sbjct: 678 WSALVGAC 685
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 139/596 (23%), Positives = 275/596 (46%), Gaps = 44/596 (7%)
Query: 47 LLSCDSLNPV-EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS 105
L +C SL + +G + ASV ++G F +D +G AL+ +Y + + +VF+ M +
Sbjct: 1 LDACVSLKALSDGRDVHASVTRHG-FGSDLVLGNALINMYSKCSSPADARNVFDGMTVRD 59
Query: 106 LVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN----EQDLEFGE 161
V+WN++++ + ++GF E+ + +F E+ + + + + + G ++ L+ G
Sbjct: 60 SVSWNTMIATYARNGFGEEAVEVFHEMALVGIPPDKYTLISALDGCCGLSCPDRGLKKGR 119
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
+IH + GF ++ + L+ MY + + A ++F + R ++W +I A ++
Sbjct: 120 EIHRRIQSIGFMSDVALQTGLIKMYGKFGEVIEARRLFDGMSRRVALTWARMITAYGQNG 179
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
+A+ELY + +D+V P++ F V+++C+ N GK IHA++++ E D V +
Sbjct: 180 FGNEAIELYKQ--IDVV-PDKVIFASVLDACSSAMNLEEGKRIHARIVEGKFEIDTVVNN 236
Query: 282 ALVDFYAKCDNLEGAHLCFSEI--SNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR 339
L+D Y C LE A F + +++VSWN++I + P L +Q
Sbjct: 237 TLLDLYGMCGCLEEAKAVFHSMQEQGRDVVSWNSIIRAHLHNDQPKEALGLFFEMQEACG 296
Query: 340 PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL--AFVT 397
P + S+V S+L ++ GL+ +
Sbjct: 297 PRQDRVSYV--SAL------------------------DACSAMGSDGLVHGKTLHGLIL 330
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
A I V + +Y R G E ++ + + V+W +I + NG +E +E
Sbjct: 331 ANRIHIDVYVGTALVTMYGRCGDVVEAKQVFDVMPSKNAVTWTSMIRGYSTNGFAREAVE 390
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
+F+ M D +V+++ A + ++ + + +H + + SD+ + + LI M+
Sbjct: 391 VFQKMEQEGCRADKIVYVAVMEASRGVEDVKMAAKIHSRLSELGWC-SDSAIQSSLIAMH 449
Query: 518 GKCGSIGSSVKIFNEMTD--RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
GKCGS+ ++ ++F+ M + R W A+I+A G + LE F+ M+ +PDR
Sbjct: 450 GKCGSVEAARRVFDAMEEKSRGSPAWNAMIAAYSRRGDKEAVLELFQAMQAASVRPDRAT 509
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ +L G + S G+E + +++ L R G + EA ++
Sbjct: 510 FLGLLAV--GGSFSPSEASAVQHAILSTGMETDSLVGTALLNTLTRSGKVGEARRV 563
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 135/578 (23%), Positives = 274/578 (47%), Gaps = 48/578 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDS-LNPVEG 58
M R +++ +I+AY + G+ +A+ ++ + P + F +L +C S +N EG
Sbjct: 160 MSRRVALTWARMITAYGQNGFGNEAIELYKQI---DVVPDKVIFASVLDACSSAMNLEEG 216
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR--KSLVTWNSIVSIF 116
++ A +++ G F D V LL LYG GCL+E +VF M + +V+WNSI+
Sbjct: 217 KRIHARIVE-GKFEIDTVVNNTLLDLYGMCGCLEEAKAVFHSMQEQGRDVVSWNSIIRAH 275
Query: 117 GKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLS--NEQDLEFGEQIHGLVIKNGFD 173
+ ++ + LF E+ + + S+V + S L G+ +HGL++ N
Sbjct: 276 LHNDQPKEALGLFFEMQEACGPRQDRVSYVSALDACSAMGSDGLVHGKTLHGLILANRIH 335
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
++ V +LV MY +C + A+++F + ++ V+W ++I + + +A+E++ +M
Sbjct: 336 IDVYVGTALVTMYGRCGDVVEAKQVFDVMPSKNAVTWTSMIRGYSTNGFAREAVEVFQKM 395
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ ++ +V V+ + G+++ + IH+++ + D + S+L+ + KC ++
Sbjct: 396 EQEGCRADKIVYVAVMEASRGVEDVKMAAKIHSRLSELGWCSDSAIQSSLIAMHGKCGSV 455
Query: 294 EGAHLCFSEISNKNIVS--WNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLR 350
E A F + K+ S WNA+I Y+ + ++ L + +Q RP+ TF +L
Sbjct: 456 EAARRVFDAMEEKSRGSPAWNAMIAAYSRRGDKEAVLELFQAMQAASVRPDRATFLGLLA 515
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+F + ++ + +G+ +D+L LN
Sbjct: 516 VGGSFSPSEA----------------SAVQHAILSTGMETDSLVGTALLNT--------- 550
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
R+G+ E ++ +L++ D+VSW ++ A A +G E ++LF+ M+ + PD
Sbjct: 551 ----LTRSGKVGEARRVFDRLDKRDVVSWTSMMVAYASHGSSLEAIDLFQEMQLQGMEPD 606
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVK 528
F+++L AC+ G ++ + +D + C ++D+ G+ G + +
Sbjct: 607 EVAFLAVLFACNHAGFFRRGWDYFASMRGDYDLEAGADHYCC--VVDLLGRAGRLADAED 664
Query: 529 IFNEMTDR-NVITWTALISALGLNGFAQRALEKFREME 565
+ M + + TW+AL+ A +G +RA R ME
Sbjct: 665 LIVSMPFKPDEATWSALVGACNTHGDVERAARISRAME 702
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+ R+VVS+ S++ AY+ G +A+ +F M +G EP + F +L +C+ G
Sbjct: 567 LDKRDVVSWTSMMVAYASHGSSLEAIDLFQEMQLQGMEPDEVAFLAVLFACNHAGFFRRG 626
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
AS+ + A A ++ L GR G L + + MP + TW+++V
Sbjct: 627 WDYFASMRGDYDLEAGADHYCCVVDLLGRAGRLADAEDLIVSMPFKPDEATWSALVGACN 686
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSF 144
HG VE + + E A T S
Sbjct: 687 THGDVERAARISRAMEAEERAATHVSL 713
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 198/659 (30%), Positives = 330/659 (50%), Gaps = 41/659 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
+ R+ VS+ +++S Y++ G ++A R++ M PT + +LS + + +G
Sbjct: 104 LSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQG 163
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A V K FC++ FVG AL+ LY G VF DM VT+N+++S +
Sbjct: 164 RMIHAQVYKQA-FCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQ 222
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E + +F E+ S + + ++ ++ DL+ G+Q+H ++K G ++ +
Sbjct: 223 CGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYIT 282
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SL+++Y +C I +A +F + +VV WN ++ A + + K+ E++ +M +
Sbjct: 283 EGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGI 342
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PNQ T+ ++ +C LG+ IH+ IKN E D++V L+D Y+K L+ A
Sbjct: 343 HPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARK 402
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF-- 355
+ +++VSW ++I GY ++ E+ G P+ + +
Sbjct: 403 ILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKA 462
Query: 356 --QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q LQ+H + YV SG +D + T +N+
Sbjct: 463 MRQGLQIHARV---------YV----------SGYAADISIWNTLVNL------------ 491
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
Y R G+ E L ++E D ++WN +I+ + YK+ L +F M A + +T
Sbjct: 492 -YARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFT 550
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F+S +SA + L ++ G +HG KT +S+T V N LI +YGKCGSI + IF+EM
Sbjct: 551 FISAISALANLADIKQGKQVHGRAVKTGH-TSETEVANALISLYGKCGSIEDAKMIFSEM 609
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+ RN ++W +I++ +G AL+ F +M+ G KP+ V I VL AC H GLV EG+
Sbjct: 610 SLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGL 669
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+ M+ YG+ P DHY CVVD+L R G L A + + MP NA+IWRT L C+
Sbjct: 670 SYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACK 728
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 151/599 (25%), Positives = 286/599 (47%), Gaps = 41/599 (6%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ A+ + GL AD +G L+ LY ++G + + VF+++ + V+W +++S + +
Sbjct: 64 EIHATSVVRGL-GADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQS 122
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ++ L+ ++ + V T V+ + + G IH V K F E V
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L+ +Y AE++F D+ D V++NT+I A+ + AL+++ M + +
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ T ++ +CA + + GK +H+ ++K + D +L+D Y KC ++E AH
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLL 358
F+ N+V WN +++ Y S F + +Q G PN+FT+ +LR+ +
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQI 362
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q+H L I+ G+E+ YV G L+ Y+K G + A
Sbjct: 363 ELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKAR--------------------- 401
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
K+L LE+ D+VSW +IA + +E L FK M+ ++PDN
Sbjct: 402 -----------KILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGL 450
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S SAC+ + + G +H + + ++D + N L+++Y +CG + +F E+
Sbjct: 451 ASAASACAGIKAMRQGLQIHARVYVSGY-AADISIWNTLVNLYARCGRSEEAFSLFREIE 509
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
++ ITW LIS G + ++AL F +M G K + I+ ++A + +++G +
Sbjct: 510 HKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQ 569
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ R ++ G E + + ++ L + G +++A+ I + M N + W T + C +
Sbjct: 570 VHGRAVKT-GHTSETEVANALISLYGKCGSIEDAKMIFSEMSL-RNEVSWNTIITSCSQ 626
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 241/503 (47%), Gaps = 42/503 (8%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
+IH + G + L+ N L+++Y + +W A ++FK++ RD VSW ++ A+S
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
+A LY +M V P V+++C + G+ IHA+V K A + FVG+
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRP 340
AL+ Y + + A F ++ + V++N LI G+A + + +QL G RP
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 341 NEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVL-GSLMTSYAKSGLISDALAF 395
+ T + +L + + LQ LH +++ G +++Y+ GSL+ Y K G I A
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGM-SFDYITEGSLLDLYVKCGDIETA--- 299
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
I+N +R ++V WN+++ A D +
Sbjct: 300 ----------------HDIFNLG-------------DRTNVVLWNLMLVAYGQISDLAKS 330
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
E+F M+A I+P+ +T+ +L C+ + LG +H L K SD +V +LID
Sbjct: 331 FEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGF-ESDMYVSGVLID 389
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY K G + + KI + R+V++WT++I+ + F + AL F+EM+ G PD +
Sbjct: 390 MYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIG 449
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
L + +AC +R+G+++ R+ S G ++ ++ +V+L R G +EA + +
Sbjct: 450 LASAASACAGIKAMRQGLQIHARVYVS-GYAADISIWNTLVNLYARCGRSEEAFSLFREI 508
Query: 636 PFPPNALIWRTFLEGCQRCRIAK 658
+ + W + G + R+ K
Sbjct: 509 EH-KDEITWNGLISGFGQSRLYK 530
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
+L++H + G + L+ YAK+GL+ A
Sbjct: 62 VLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQAR----------------------- 98
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
++ +L D VSW +++ A +G KE L+ M + P Y S
Sbjct: 99 ---------QVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSS 149
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+LSAC+K A G +H + K + S+TFV N LI +Y GS + ++F +M
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYK-QAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFC 208
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+ +T+ LIS G + AL+ F EM+ G +PD V + ++L AC G +++G +L
Sbjct: 209 DRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLH 268
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ ++ G+ + ++DL V+ G ++ A I + N ++W L
Sbjct: 269 SYLLKA-GMSFDYITEGSLLDLYVKCGDIETAHDIF-NLGDRTNVVLWNLML 318
>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
Length = 899
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 196/647 (30%), Positives = 326/647 (50%), Gaps = 49/647 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
+P+ NV S+ ++I+AY++ G++ + L +F M G +P F F +L+ C S + EG
Sbjct: 87 LPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEG 146
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + G+ VG A++ LYG+ G + E +VFE +P ++LV+WN++++ +
Sbjct: 147 KAIHDCAVLAGM--ETQVVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQ 204
Query: 119 HGFVEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G +D M +F + + V +++FV V+ SN DL G+ H +I+ GFD L
Sbjct: 205 NGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLF 264
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V NSLVNMY +C + A +F+ + R+VVSW +I A A+ A +LY RM +
Sbjct: 265 VGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCE- 323
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN TF+ V++SC ++ + IHA ++ + + D + LV Y KC +++ A
Sbjct: 324 --PNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAW 381
Query: 298 LCFSEISNK--NIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
F + + N V+WNA+I G A ++L G RPN T+ L + +
Sbjct: 382 SIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSS 441
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
L QLH I+ L + N+ AV+
Sbjct: 442 LNDLTRGRQLHARIL---------------------------LENIHEANLSNAVI---- 470
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+Y + G +E + +++ D+VSWN +IA A +G ++ LE FK M D
Sbjct: 471 --NMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDLEGWTTD 528
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLI-KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
T++ + AC + +LALG ++H ++ + D V L+ MY +CGS+ + +
Sbjct: 529 RATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSV 588
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F RN++TW+ LI+A +G AL+ FREM+ G KPD + ++ AC G+V
Sbjct: 589 FWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVV 648
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
++G+ F M Y + DH+ +VDLL R G L+EAE+++ P
Sbjct: 649 KDGVFYFVSMVEDYSIPASEDHFGGMVDLLGRAGWLEEAEQVMRKNP 695
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 145/513 (28%), Positives = 273/513 (53%), Gaps = 40/513 (7%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
++ L+ +Y + GCL++ + VFE +P ++ +W ++++ + K G + + + LF ++
Sbjct: 62 YIQNHLIFMYAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLD 121
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
F V+ S+ L G+ IH + G + ++ V N++VN+Y +C + A
Sbjct: 122 GTKPDAFVFSTVLTACSSAGALNEGKAIHDCAVLAGMETQV-VGNAIVNLYGKCGRVHEA 180
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD-IVFPNQTTFVYVINSCAG 254
+ +F+ + R++VSWN +I A A++ + A++++ M +D V PN TFV V+++C+
Sbjct: 181 KAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSN 240
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
L + GKS H ++I+ + +FVG++LV+ Y KC +++ A L F ++S++N+VSW +
Sbjct: 241 LLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVM 300
Query: 315 ILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYE 370
I YA + + F L + ++ PN TF V+ S L + L Q+H ++ G++
Sbjct: 301 IWAYAQQGFIRAAFDLYK--RMDCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFD 358
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ + L+T Y K G + A + I + R+
Sbjct: 359 SDAVLQVCLVTMYGKCGSVDSAWS---------------IFENLKERSN----------- 392
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+ V+WN +I+ A +G+ K+ LE F M + P++ T+++ L ACS L +L G
Sbjct: 393 ----NAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRG 448
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
LH I I ++ + N +I+MYGKCGS+ ++ F +M +R+V++W +I+
Sbjct: 449 RQLHARILLENIHEAN--LSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQ 506
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+G ++ALE F++M+ G+ DR + + AC
Sbjct: 507 HGSGRQALEFFKQMDLEGWTTDRATYLGAIDAC 539
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 207/673 (30%), Positives = 335/673 (49%), Gaps = 46/673 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMF--LYMINRGFEPTQFTFGGLL-SCDSLNPVE 57
MP +N+VS+ S IS +++ G EDA+ +F + G P +F L +C V
Sbjct: 72 MPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVS 131
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G Q+ ++ GL + +VGTAL+ LY + GC+D + VF+ +P K+ VTW ++++ +
Sbjct: 132 FGQQVHGVAVRIGLD-GNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGY 190
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ G + LF ++ V + S LE G Q HG + + +
Sbjct: 191 SQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDA 250
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V N+L+++Y +C+ + A K+F +E R++VSW T+I ++ +A+ ++ ++S +
Sbjct: 251 SVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQE 310
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
P+ ++NSC L G+ +HA IK LE D +V ++L+D YAKC++L A
Sbjct: 311 GWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEA 370
Query: 297 HLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL---RSS 352
F ++ + +S+NA+I GY+ +I + ++ +P+ TF +L S
Sbjct: 371 RAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQ 430
Query: 353 LAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
A +L Q+H LI++ G Y SL+ Y+K L+ DA A +
Sbjct: 431 SAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLM------------ 478
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+NR D+V WN +I A N +E ++LF ++ + + P+
Sbjct: 479 ---HNR-----------------DMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNE 518
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+TFV+L++ S L ++ G H I K SD V N LIDMY KCG I +F
Sbjct: 519 FTFVALVTVASTLVSMFHGQQFHAQIIKAGA-DSDHHVSNALIDMYAKCGFIKEGRLLFE 577
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
++VI W ++IS +G A+ AL FR M G +P+ V + VL+AC H GLV E
Sbjct: 578 STLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDE 637
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G+ F+ M Y +EP +HY VV+L R G L A++ I MP P A +WR+ L C
Sbjct: 638 GLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSAC 697
Query: 652 Q---RCRIAKYDT 661
I +Y T
Sbjct: 698 HLFGNVEIGRYAT 710
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 156/582 (26%), Positives = 283/582 (48%), Gaps = 42/582 (7%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D F+ LL Y + G + + +F+ MP K+LV+W S +S+ +HG ED + LF
Sbjct: 45 DLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQ 104
Query: 134 RSEVALTESSFV--GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
R+ + F+ + + + + FG+Q+HG+ ++ G D + V +L+N+Y +
Sbjct: 105 RASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGC 164
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
I +A +F + +++ V+W +I ++ G ALEL+ +M +D V P++ +++
Sbjct: 165 IDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSA 224
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
C+ L G+ H + A+E D V +AL+D Y KC L A F + N+N+VSW
Sbjct: 225 CSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSW 284
Query: 312 NALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS--SLA--FQLLQLHCLIIR 366
+I GY S ++ + +L Q G++P+ F + +L S SLA +Q Q+H I+
Sbjct: 285 TTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIK 344
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
E+ EYV SL+ YAK +++A RAV A
Sbjct: 345 ANLESDEYVKNSLIDMYAKCEHLTEA----------RAVFEA------------------ 376
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
L D +S+N +I + GD +++F MR + P TFVSLL S
Sbjct: 377 ----LAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSA 432
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
+ L +HGLI K+ S D + + LID+Y K + + +FN M +R+++ W A+I
Sbjct: 433 IELSKQIHGLIVKSG-TSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIF 491
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
L N + A++ F +++ G P+ +A++T + G + ++ ++ G +
Sbjct: 492 GLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKA-GAD 550
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ + ++D+ + G +KE +++ + + W + +
Sbjct: 551 SDHHVSNALIDMYAKCGFIKEG-RLLFESTLGKDVICWNSMI 591
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/494 (22%), Positives = 211/494 (42%), Gaps = 42/494 (8%)
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES--E 221
H + G +L +AN L+ Y + + A ++F + +++VSW + I A+ E
Sbjct: 34 HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
AL + + PN+ + +CA + G+ +H ++ L+ +V+VG+
Sbjct: 94 EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGT 153
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRP 340
AL++ YAK ++ A L F + KN V+W A+I GY+ L + L G RP
Sbjct: 154 ALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRP 213
Query: 341 NEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
+ F + + + A L Q H R+ E V+ +L+ Y K
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCK----------C 263
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
+ L++ R KL +E ++VSW +IA N E +
Sbjct: 264 SRLSLAR----------------------KLFDCMENRNLVSWTTMIAGYMQNSCDAEAM 301
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
+F + PD + S+L++C L + G +H K + SD +V N LIDM
Sbjct: 302 AMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKAN-LESDEYVKNSLIDM 360
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y KC + + +F + + + I++ A+I G A++ F +M + KP +
Sbjct: 361 YAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTF 420
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+++L + ++ + +S G ++ ++D+ ++ +++A+ + M
Sbjct: 421 VSLLGVSSSQSAIELSKQIHGLIVKS-GTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLM- 478
Query: 637 FPPNALIWRTFLEG 650
+ +IW + G
Sbjct: 479 HNRDMVIWNAMIFG 492
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 194/658 (29%), Positives = 341/658 (51%), Gaps = 22/658 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+VVS+NS++S Y + G ++ +F+ M G E TF +L C L G
Sbjct: 140 MPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLG 199
Query: 59 AQLQASVLKNGLFC-ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ V++ G C D +ALL +Y + E + VF+ +P K+ V+W++I++
Sbjct: 200 MQIHGIVVRVG--CDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCV 257
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ + + F E+ + +++S + V+ + +L G Q+H +K+ F + +
Sbjct: 258 QNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI 317
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V + ++MY +C + A+ +F + E + S+N +I ++ E+ KAL L+ R+
Sbjct: 318 VRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSG 377
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ ++ + V +CA ++ G I+ IK++L DV V +A +D Y KC L A
Sbjct: 378 LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 437
Query: 298 LCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F E+ ++ VSWNA+I + ++FL + +L+ P+EFTF +L++
Sbjct: 438 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS 497
Query: 357 L---LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L +++H I++ G + V SL+ Y+K G+I +A + R AN+
Sbjct: 498 LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS-----RFFQRANV--- 549
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+G E K+ ++ + VSWN +I+ ++ LF M I PD +T
Sbjct: 550 ----SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 605
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+ ++L C+ L + LG +H + K E+ SD ++C+ L+DMY KCG + S +F +
Sbjct: 606 YATVLDTCANLASAGLGKQIHAQVIKKEL-QSDVYICSTLVDMYSKCGDLHDSRLMFEKS 664
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
R+ +TW A+I +G + A++ F M KP+ V I++L AC H GL+ +G+
Sbjct: 665 LRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGL 724
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
E F M R YG++P++ HY +VD+L + G +K A ++I MPF + +IWRT L C
Sbjct: 725 EYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVC 782
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 175/671 (26%), Positives = 309/671 (46%), Gaps = 64/671 (9%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQ 62
+ +F+ + ++ G +E + +MI GF PT F LL +S + V
Sbjct: 47 STTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFV-----S 101
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
AS++ + + D ++ Y + + + S F MP + +V+WNS++S + ++G
Sbjct: 102 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGES 161
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ +F ++ R + +F ++ S +D G QIHG+V++ G D +++ A++L
Sbjct: 162 LKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASAL 221
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
++MY + + ++F+ + ++ VSW+ II ++ AL+ + M +Q
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQ 281
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
+ + V+ SCA L LG +HA +K+ D V +A +D YAKCDN++ A + F
Sbjct: 282 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 341
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
N N S+NA+I GY+ + LL L+ G +E + S V R+
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA---------- 391
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
C +++ E GL LA ++L++ V AN +Y +
Sbjct: 392 CALVKGLSE----------------GLQIYGLAIKSSLSLD--VCVANAAIDMYGKCQAL 433
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
E ++ ++ R D VSWN +IAA NG E L LF M +RI PD +TF S+L AC
Sbjct: 434 AEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC 493
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NV-- 538
+ +L G +H I K+ + S+ + C+ LIDMY KCG I + KI + R NV
Sbjct: 494 TG-GSLGYGMEIHSSIVKSGMASNSSVGCS-LIDMYSKCGMIEEAEKIHSRFFQRANVSG 551
Query: 539 -----------------ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
++W ++IS + ++ A F M +G PD+ VL
Sbjct: 552 TMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLD 611
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHC--VVDLLVRYGHLKEAEKIITTMPFPP 639
C + G ++ ++ + E + D Y C +VD+ + G L ++ +++
Sbjct: 612 TCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRR 667
Query: 640 NALIWRTFLEG 650
+ + W + G
Sbjct: 668 DFVTWNAMICG 678
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 133/535 (24%), Positives = 235/535 (43%), Gaps = 63/535 (11%)
Query: 129 FCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
F + + +++ ++F V + + LE G+Q H +I +GF V N L+ +Y
Sbjct: 36 FTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTN 95
Query: 189 CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA---------------------- 226
SA +F + +RDVVSWN +I ++S + KA
Sbjct: 96 SRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGY 155
Query: 227 ---------LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
+E+++ M + + + TF ++ C+ L+++ LG IH V++ + DV
Sbjct: 156 LQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDV 215
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQL 336
SAL+D YAK + F I KN VSW+A+I G + + ++ E+ ++
Sbjct: 216 VAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 275
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
++ ++ VLRS A L+L G L KS +D +
Sbjct: 276 NAGVSQSIYASVLRSCAALSELRLG---------------GQLHAHALKSDFAADGIVRT 320
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
L+ +Y + + L E + S+N +I + + L
Sbjct: 321 ATLD-------------MYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKAL 367
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
LF + ++ + D + + AC+ + L+ G ++GL K+ +S D V N IDM
Sbjct: 368 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS-LSLDVCVANAAIDM 426
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
YGKC ++ + ++F+EM R+ ++W A+I+A NG L F M +PD
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
++L AC GG + GME+ + +S G+ ++D+ + G ++EAEKI
Sbjct: 487 GSILKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 108/256 (42%), Gaps = 10/256 (3%)
Query: 399 LNIPRAVVPAN--IIAGI-YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
L++ R+VV N + I Y R ++ L+Q+ +++ V CA G +
Sbjct: 8 LHMTRSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELG 67
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
+ +M + P + LL + + S + + +++S N +I+
Sbjct: 68 KQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVS-----WNKMIN 122
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
Y K + + FN M R+V++W +++S NG + +++E F +M G + D
Sbjct: 123 GYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRT 182
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+L C GM++ + R G + ++ ++D+ + E+ ++ +
Sbjct: 183 FAIILKVCSFLEDTSLGMQIHGIVVR-VGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 241
Query: 636 PFPPNALIWRTFLEGC 651
P N++ W + GC
Sbjct: 242 P-EKNSVSWSAIIAGC 256
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 194/658 (29%), Positives = 341/658 (51%), Gaps = 22/658 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+VVS+NS++S Y + G ++ +F+ M G E TF +L C L G
Sbjct: 98 MPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLG 157
Query: 59 AQLQASVLKNGLFC-ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ V++ G C D +ALL +Y + E + VF+ +P K+ V+W++I++
Sbjct: 158 MQIHGIVVRVG--CDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCV 215
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ + + F E+ + +++S + V+ + +L G Q+H +K+ F + +
Sbjct: 216 QNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI 275
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V + ++MY +C + A+ +F + E + S+N +I ++ E+ KAL L+ R+
Sbjct: 276 VRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSG 335
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ ++ + V +CA ++ G I+ IK++L DV V +A +D Y KC L A
Sbjct: 336 LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 395
Query: 298 LCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F E+ ++ VSWNA+I + ++FL + +L+ P+EFTF +L++
Sbjct: 396 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS 455
Query: 357 L---LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L +++H I++ G + V SL+ Y+K G+I +A + R AN+
Sbjct: 456 LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS-----RFFQRANV--- 507
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+G E K+ ++ + VSWN +I+ ++ LF M I PD +T
Sbjct: 508 ----SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 563
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+ ++L C+ L + LG +H + K E+ SD ++C+ L+DMY KCG + S +F +
Sbjct: 564 YATVLDTCANLASAGLGKQIHAQVIKKEL-QSDVYICSTLVDMYSKCGDLHDSRLMFEKS 622
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
R+ +TW A+I +G + A++ F M KP+ V I++L AC H GL+ +G+
Sbjct: 623 LRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGL 682
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
E F M R YG++P++ HY +VD+L + G +K A ++I MPF + +IWRT L C
Sbjct: 683 EYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVC 740
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 174/659 (26%), Positives = 304/659 (46%), Gaps = 64/659 (9%)
Query: 17 SRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNGLFCAD 74
++ G +E + +MI GF PT F LL +S + V AS++ + + D
Sbjct: 17 AKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFV-----SASMVFDKMPLRD 71
Query: 75 AFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR 134
++ Y + + + S F MP + +V+WNS++S + ++G + +F ++ R
Sbjct: 72 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 131
Query: 135 SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
+ +F ++ S +D G QIHG+V++ G D +++ A++L++MY +
Sbjct: 132 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 191
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
+ ++F+ + ++ VSW+ II ++ AL+ + M +Q+ + V+ SCA
Sbjct: 192 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 251
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
L LG +HA +K+ D V +A +D YAKCDN++ A + F N N S+NA+
Sbjct: 252 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAM 311
Query: 315 ILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE 373
I GY+ + LL L+ G +E + S V R+ C +++ E
Sbjct: 312 ITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA----------CALVKGLSE--- 358
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
GL LA ++L++ V AN +Y + E ++ ++ R
Sbjct: 359 -------------GLQIYGLAIKSSLSLD--VCVANAAIDMYGKCQALAEAFRVFDEMRR 403
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
D VSWN +IAA NG E L LF M +RI PD +TF S+L AC+ +L G +
Sbjct: 404 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEI 462
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NV-------------- 538
H I K+ + S+ + C+ LIDMY KCG I + KI + R NV
Sbjct: 463 HSSIVKSGMASNSSVGCS-LIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKR 521
Query: 539 -----ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++W ++IS + ++ A F M +G PD+ VL C + G
Sbjct: 522 LQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGK 581
Query: 594 ELFERMNRSYGVEPEMDHYHC--VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++ ++ + E + D Y C +VD+ + G L ++ +++ + + W + G
Sbjct: 582 QIHAQVIKK---ELQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICG 636
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/655 (28%), Positives = 335/655 (51%), Gaps = 34/655 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCD-SLNPVEGA 59
M +RNV+S+ +I + G ++A +FL M GF P +T+ +L+ + S +E
Sbjct: 280 MVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWV 339
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ S N D VG AL+ +Y + G +D+ VF+ M + + +W ++ +H
Sbjct: 340 KEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQH 399
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIH--GLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G ++ LF ++ R+ ++++ +++ +++ LE+ + +H + GF +L
Sbjct: 400 GRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLR 459
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ N+L++MY +C I A +F + RDV+SWN ++G LA++ +A ++L+M +
Sbjct: 460 IGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEG 519
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P+ TT++ ++N+ +H ++ L D VGSA + Y +C +++ A
Sbjct: 520 LVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDAR 579
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
L F ++S +++ +WNA+I G A + ++ L +++ + G+ P+ TF ++L +++ +
Sbjct: 580 LLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEE 639
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L+ + + + +GL+ L + A+V Y+
Sbjct: 640 ALEW---------------VKEVHSHATDAGLVD--------LRVGNALVHT------YS 670
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G ++ + ++ +W ++I A +G + F M I PD T+VS
Sbjct: 671 KCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVS 730
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+LSAC+ L +H ++ SD V N L+ MY KCGSI + +F++M +R
Sbjct: 731 ILSACASTGALEWVKEVHNHAVSAGLV-SDLRVGNALVHMYAKCGSIDDARSVFDDMVER 789
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+V +WT +I L +G AL+ F +M+ GFKP+ + +AVLTAC H GLV EG F
Sbjct: 790 DVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQF 849
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
M + YG+EP M+HY C+VDLL R G L+EAE I MP P+ W L C
Sbjct: 850 LSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGAC 904
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/652 (24%), Positives = 310/652 (47%), Gaps = 38/652 (5%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQL 61
+N+ + ++I Y+ G+ EDA+R++ M +P + T+ +L C +N G ++
Sbjct: 182 KNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKI 241
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A ++++G F +D V TAL+ +Y + G +++ +F+ M +++++W ++ +G
Sbjct: 242 HAHIIQSG-FQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGR 300
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ LF ++ R ++V +++ ++ LE+ +++H + G +L V N+
Sbjct: 301 GQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNA 360
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
LV+MY + I A +F + RD+ SW +IG LA+ +A L+L+M + PN
Sbjct: 361 LVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPN 420
Query: 242 QTTFVYVINSCAGLQNSILG--KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
TT++ ++N+ A S L K +H + D+ +G+AL+ YAKC +++ A L
Sbjct: 421 LTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLV 480
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F + +++++SWNA++ G A F + +++ Q G P+ T+ LL
Sbjct: 481 FDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTY---------LSLL 531
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
H + + N + ++GLISD + A + +Y R
Sbjct: 532 NTHGSTDALEWVN------EVHKHAVETGLISD-------FRVGSAFIH------MYIRC 572
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
G ++ L +L + +WN +I A +E L LF M+ PD TF+++L
Sbjct: 573 GSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINIL 632
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
SA L +H ++ D V N L+ Y KCG++ + ++F++M +RNV
Sbjct: 633 SANVDEEALEWVKEVHSHATDAGLV--DLRVGNALVHTYSKCGNVKYAKQVFDDMVERNV 690
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
TWT +I L +G A F +M G PD +++L+AC G + E ++
Sbjct: 691 TTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGAL-EWVKEVHN 749
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
S G+ ++ + +V + + G + +A + M + W + G
Sbjct: 750 HAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDM-VERDVFSWTVMIGG 800
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/563 (26%), Positives = 278/563 (49%), Gaps = 31/563 (5%)
Query: 23 EDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNGLFCADAFVGTA 80
+DA+ M + +G F++ +L + + Q+ ++K+G+ + +V
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGME-QNLYVANK 158
Query: 81 LLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALT 140
LL +Y R G L VF+ + +K++ W +++ + ++G ED M ++ ++ +
Sbjct: 159 LLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPN 218
Query: 141 ESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
E +++ ++ +L++G++IH +I++GF ++ V +LVNMY +C I A+ +F
Sbjct: 219 EITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFD 278
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
+ R+V+SW +IG LA +A L+L+M + PN T+V ++N+ A
Sbjct: 279 KMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEW 338
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
K +H+ + L D+ VG+ALV YAK +++ A + F ++ ++I SW +I G A
Sbjct: 339 VKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQ 398
Query: 321 KSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
F L +++ + G PN T+ +L +S L +++ +++ E
Sbjct: 399 HGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEW--VKVVHKHAE------ 450
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
++G ISD L I A++ +Y + G ++ + + D++SW
Sbjct: 451 -----EAGFISD-------LRIGNALIH------MYAKCGSIDDARLVFDGMCDRDVISW 492
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
N ++ A NG E +F M+ + PD+ T++SLL+ L + +H +
Sbjct: 493 NAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVE 552
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
T +IS D V + I MY +CGSI + +F++++ R+V TW A+I + AL
Sbjct: 553 TGLIS-DFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALS 611
Query: 560 KFREMEFLGFKPDRVALIAVLTA 582
F +M+ GF PD I +L+A
Sbjct: 612 LFLQMQREGFIPDATTFINILSA 634
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 231/471 (49%), Gaps = 42/471 (8%)
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+D + + V+ +A+ S+V ++ ++D+ +Q+H +IK+G + L VAN L
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
+ +Y +C + A ++F + +++ W T+IG AE + A+ +Y +M + PN+
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNE 219
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T++ ++ +C N GK IHA +I++ + DV V +ALV+ Y KC ++E A L F +
Sbjct: 220 ITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDK 279
Query: 303 ISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL--- 358
+ +N++SW +I G A F L +++ + G+ PN +T+ +L ++ + L
Sbjct: 280 MVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWV 339
Query: 359 -QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
++H + G V +L+ YAKSG I DA + G+ R
Sbjct: 340 KEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARV---------------VFDGMTER 384
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
DI SW ++I A +G +E LF M+ P+ T++S+
Sbjct: 385 -----------------DIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSI 427
Query: 478 LSACSKLCNLALG--SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
L+A + AL +H ++ I SD + N LI MY KCGSI + +F+ M D
Sbjct: 428 LNASAIASTSALEWVKVVHKHAEEAGFI-SDLRIGNALIHMYAKCGSIDDARLVFDGMCD 486
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
R+VI+W A++ L NG A F +M+ G PD +++L HG
Sbjct: 487 RDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNT--HG 535
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 197/659 (29%), Positives = 331/659 (50%), Gaps = 39/659 (5%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGA 59
P R++ N ++ YSRC ++AL +F+ + G P +T +LS S N G
Sbjct: 63 PLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGE 122
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ +K GL VG +L+ +Y + G + + VF++M + +V+WNS+++ + +
Sbjct: 123 QVHCQCVKCGLV-HHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWN 181
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
F + LFC + + VI L+N+ + G QIH LV+K GF+ E LV
Sbjct: 182 RFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVC 241
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
NSL++M + + A +F ++E +D VSWN++I + +A E + M +
Sbjct: 242 NSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAK 301
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P TF VI SCA L+ L + +H K +K+ L + V +AL+ KC ++ A
Sbjct: 302 PTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSL 361
Query: 300 FSEISN-KNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
FS + +++VSW A+I GY L L++ G +PN FT+S +L A +
Sbjct: 362 FSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFI 421
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
++H +I+ YE V +L+ ++ K G ISDA
Sbjct: 422 SEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDA------------------------- 456
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
VK+ +E D+++W+ ++A A G+ +E ++F + I P+ +TF S+
Sbjct: 457 -------VKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSI 509
Query: 478 LSACS-KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
++AC+ ++ G H K + ++ V + L+ +Y K G+I S+ +IF +R
Sbjct: 510 INACTAPTASVEQGKQFHAYAIKLRL-NNALCVSSSLVTLYAKRGNIESAHEIFKRQKER 568
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
++++W ++IS +G A++ALE F EM+ + D + I V++AC H GLV +G F
Sbjct: 569 DLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYF 628
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
M + + P M+HY C++DL R G L +A II MPFPP A +WR L + R
Sbjct: 629 NIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHR 687
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 144/542 (26%), Positives = 258/542 (47%), Gaps = 46/542 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
M DR+VVS+NS+++ YS + + +F M G+ P +T +++ + G
Sbjct: 163 MGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIG 222
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A V+K G F + V +L+ + + G L + VF++M K V+WNS+++
Sbjct: 223 MQIHALVVKLG-FETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVI 281
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + F + + T ++F VI ++ ++L +H +K+G V
Sbjct: 282 NGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNV 341
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+L+ +C I A +F + ++ VVSW +I ++ + +A+ L+ M +
Sbjct: 342 LTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREG 401
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN T+ ++ +Q+++ IHA+VIK E VG+AL+D + K N+ A
Sbjct: 402 VKPNHFTYSTILT----VQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAV 457
Query: 298 LCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA-- 354
F I K++++W+A++ GYA + + + + +L + G +PNEFTF ++ + A
Sbjct: 458 KVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPT 517
Query: 355 ---FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
Q Q H I++ N V SL+T YAK G I A
Sbjct: 518 ASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESA------------------- 558
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
I+ R Q ER D+VSWN +I+ A +G K+ LE+F+ M+ + D
Sbjct: 559 HEIFKR------------QKER-DLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDA 605
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+ ++SAC+ + G + ++ I+ + +ID+Y + G +G ++ I N
Sbjct: 606 ITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIIN 665
Query: 532 EM 533
M
Sbjct: 666 GM 667
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 219/463 (47%), Gaps = 47/463 (10%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A+++F +RD+ N ++ + + +AL L++ + + P+ T V++ CAG
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
N +G+ +H + +K L + VG++LVD Y K N+ F E+ ++++VSWN+L
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174
Query: 315 ILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ-----LLQLHCLIIRMG 368
+ GY+ ++ L L+Q+ GYRP+ +T S V+ ++LA Q +Q+H L++++G
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVI-AALANQGAVAIGMQIHALVVKLG 233
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
+E V SL++ +KSG++ DA R V
Sbjct: 234 FETERLVCNSLISMLSKSGMLRDA----------RVV----------------------F 261
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
+E D VSWN +IA NG E E F M+ A P + TF S++ +C+ L L
Sbjct: 262 DNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELG 321
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD-RNVITWTALISA 547
L LH K+ +S++ V L+ KC I + +F+ M ++V++WTA+IS
Sbjct: 322 LVRVLHCKTLKSG-LSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISG 380
Query: 548 LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
NG +A+ F M G KP+ +LT +H + E + N E
Sbjct: 381 YLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTV-QHAVFISEIHAEVIKTN----YEK 435
Query: 608 EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++D V+ G++ +A K+ + + + W L G
Sbjct: 436 SSSVGTALLDAFVKIGNISDAVKVFELIE-TKDVIAWSAMLAG 477
>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 210/669 (31%), Positives = 339/669 (50%), Gaps = 53/669 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMF--LYMINRGF--EPTQFTFGGLLS--CDSLNPVE 57
RN + +NSI+S YS+ G +F + M + G +P ++TFG L++ C S++
Sbjct: 108 RNSIYWNSIVSVYSQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGL 167
Query: 58 G--AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
Q+ A + K+GL A+ +VG+AL G + R G D +FE M ++ V+ N ++
Sbjct: 168 SLLGQILARIKKSGLL-ANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVG 226
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN----EQDLEFGEQIHGLVIKNG 171
+ E+ + +F E R V + S+V ++ + ++ G ++HG I+ G
Sbjct: 227 LVRQKCGEEAVEVFKE-TRHLVDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTG 285
Query: 172 F-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
D ++ V N L+NMY +C I A +F + +D VSWN++I L +++ F A++ Y
Sbjct: 286 LNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSY 345
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
M + P+ T + ++SCA L +LG+ H + IK L+ DV V + L+ YA+
Sbjct: 346 NSMRKTGLMPSNFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAET 405
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS--IFLLIELLQLGYRPNEFTFSHV 348
+L FS + ++ VSWN +I A + S I + +E+++ G+ PN TF ++
Sbjct: 406 GHLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINL 465
Query: 349 LR--SSLAFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
L SSL+ L Q+H LI++ ++ + +L+ Y KSG + +
Sbjct: 466 LATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENC------------ 513
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
I++R ER D VSWN +I+ HN + ++L M
Sbjct: 514 -------EEIFSRMS------------ERRDEVSWNSMISGYIHNDLLCKAMDLVWLMMQ 554
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
D +TF ++LSAC+ + L G +H + + SD + + L+DMY KCG I
Sbjct: 555 RGQRLDCFTFATVLSACATVATLERGMEVHACAIRA-CLESDVVIGSALVDMYSKCGRID 613
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
+ + FN M RN+ +W ++IS +G+ AL F M+ G PD + + VL+AC
Sbjct: 614 YASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQLPDHITFVGVLSACS 673
Query: 585 HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
H GLV EG E F+ M YG+ P ++HY C+VDLL R G L + + I MP PN LIW
Sbjct: 674 HIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIDNFINKMPIKPNILIW 733
Query: 645 RTFLEGCQR 653
RT L C R
Sbjct: 734 RTVLGACCR 742
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 185/674 (27%), Positives = 320/674 (47%), Gaps = 56/674 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDS--LNPVE 57
MPDRN V++ +IS Y++ G +DA + MI GF P +F FG + +C L ++
Sbjct: 1 MPDRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQ 60
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRH-GCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G Q+ +LK+ + DA + L+ +YG++ G +D SVF+++ ++ + WNSIVS+
Sbjct: 61 LGMQIHGLILKSP-YANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSV 119
Query: 116 FGKHGFVEDCMFLFCELVRSEVALT----ESSFVGVIHGLSNEQD--LEFGEQIHGLVIK 169
+ + G C LF + ++ L+ E +F +I + D L QI + K
Sbjct: 120 YSQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKK 179
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
+G L V ++L + + A K+F+ + R+ VS N ++ L + +A+E+
Sbjct: 180 SGLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEV 239
Query: 230 Y--LRMSVDIVFPNQTTFVYVINSCAGL----QNSILGKSIHAKVIKNAL-ECDVFVGSA 282
+ R VDI N ++V ++++CA + G+ +H I+ L + V VG+
Sbjct: 240 FKETRHLVDI---NVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNG 296
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPN 341
L++ YAKC +++ A F + +K+ VSWN++I G +K ++ + + G P+
Sbjct: 297 LINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPS 356
Query: 342 EFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
FT L S + L C++ +G + + + K GL D
Sbjct: 357 NFTLISALSSCAS-----LGCIL--LGQQTHGEGI--------KLGLDMD---------- 391
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG-DYKEVLELFK 460
V +N + +Y TG E K+ S + D VSWN VI A A +G E +E+F
Sbjct: 392 ---VSVSNTLLALYAETGHLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFL 448
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M A P+ TF++LL+ S L L +H LI K + D + N L+ YGK
Sbjct: 449 EMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYN-VKDDNAIENALLACYGKS 507
Query: 521 GSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
G + + +IF+ M++ R+ ++W ++IS N +A++ M G + D V
Sbjct: 508 GEMENCEEIFSRMSERRDEVSWNSMISGYIHNDLLCKAMDLVWLMMQRGQRLDCFTFATV 567
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
L+AC + GME+ R+ +E ++ +VD+ + G + A + MP
Sbjct: 568 LSACATVATLERGMEVHACAIRAC-LESDVVIGSALVDMYSKCGRIDYASRFFNLMPM-R 625
Query: 640 NALIWRTFLEGCQR 653
N W + + G R
Sbjct: 626 NLYSWNSMISGYAR 639
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 171/385 (44%), Gaps = 56/385 (14%)
Query: 303 ISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL---- 357
+ ++N V+W LI GY P + +L E++ G+ PN F F +R+ L
Sbjct: 1 MPDRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQ 60
Query: 358 --LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+Q+H LI++ Y N + L++ Y K ++ ++ R+V
Sbjct: 61 LGMQIHGLILKSPYANDASLCNVLISMYGK---------YLGYIDYARSV---------- 101
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA----RIYPDN 471
++E + + WN +++ + GD ELF M+ A + P+
Sbjct: 102 ------------FDEIEIRNSIYWNSIVSVYSQRGDAASCFELFSSMQMADSGLSLKPNE 149
Query: 472 YTFVSLLS-ACSKL-CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
YTF SL++ ACS + L+L + IKK+ ++ ++ +V + L + + GS + KI
Sbjct: 150 YTFGSLITAACSSVDSGLSLLGQILARIKKSGLL-ANLYVGSALAGGFSRLGSFDYARKI 208
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F +MT RN ++ L+ L + A+E F+E L + + + +L+AC L+
Sbjct: 209 FEQMTARNAVSMNGLMVGLVRQKCGEEAVEVFKETRHL-VDINVDSYVILLSACAEFALL 267
Query: 590 ----REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
R+G E+ R+ + ++ + ++++ + G + A + M +++ W
Sbjct: 268 DEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLM-VDKDSVSWN 326
Query: 646 TFLEG-----CQRCRIAKYDTLNST 665
+ + G C + Y+++ T
Sbjct: 327 SMITGLDQNKCFEDAVKSYNSMRKT 351
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
MP RN+ S+NS+IS Y+R GY ++ALR+F M G P TF G+LS C + V EG
Sbjct: 622 MPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEG 681
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIV 113
+ S+ + + ++ L GR G LD++ + MP + +++ W +++
Sbjct: 682 FEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIDNFINKMPIKPNILIWRTVL 737
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/604 (30%), Positives = 306/604 (50%), Gaps = 33/604 (5%)
Query: 50 CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
C S+ + Q+ V+KNGL+ F T L+ L+ ++G ++E VFE + K +
Sbjct: 59 CTSMKELH--QIIPLVIKNGLYNEHLF-QTKLVSLFSKYGSINEAARVFEPIDDKLDALY 115
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
++++ + K+ +E + C + +V +F ++ + DL+ G++IHG +I
Sbjct: 116 HTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLIT 175
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
N F + +VNMY +C I A KMF + RD+VSWNTII +++ KALEL
Sbjct: 176 NSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALEL 235
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
LRM + P+ T V V+ + A + ++GKSIH I+ V + +AL D Y+K
Sbjct: 236 VLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSK 295
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHV 348
C ++E A L F + K +VSWN+++ GY P + E +L+ G P T
Sbjct: 296 CGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEA 355
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
L + L+ + + FV LN+ +
Sbjct: 356 LHACADLGDLERGKFVHK----------------------------FVDQLNLGSDISVM 387
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N + +Y++ + + + + L VSWN +I A NG E L F M++ +
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMK 447
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD++T VS++ A ++L +HGLI ++ + + FV L+DMY KCG+I + K
Sbjct: 448 PDSFTMVSVIPALAELSVTRHAKWIHGLIIRS-CLDKNIFVTTALVDMYSKCGAIHMARK 506
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F+ ++DR+VITW A+I G +G + AL+ F +M+ +P+ + ++V++AC H GL
Sbjct: 507 LFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGL 566
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
V EG+ F+ M + YG+EP MDHY +VDLL R G +KEA I MP P ++ L
Sbjct: 567 VDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAML 626
Query: 649 EGCQ 652
C+
Sbjct: 627 GACK 630
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 238/474 (50%), Gaps = 14/474 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL--SCDSLNPVEG 58
MP+R++VS+N+II+ +S+ G+ + AL + L M + G P T +L + D + G
Sbjct: 208 MPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVG 267
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ ++ G F + TAL +Y + G ++ +F+ M +K++V+WNS++ + +
Sbjct: 268 KSIHGYAIRAG-FAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 326
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G E + +F +++ + T + + +H ++ DLE G+ +H V + ++ V
Sbjct: 327 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISV 386
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY +C + A +F ++ R VSWN +I A++ +AL + M +
Sbjct: 387 MNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGM 446
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T V VI + A L + K IH +I++ L+ ++FV +ALVD Y+KC + A
Sbjct: 447 KPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARK 506
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVL----RSSL 353
F IS++++++WNA+I GY + + L + ++ G PN+ T+ V+ S L
Sbjct: 507 LFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGL 566
Query: 354 AFQ-LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ L + G E G+++ ++G I +A F+ + I + +
Sbjct: 567 VDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAML 626
Query: 413 G---IYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC-AHNGDYKEVLELFKYM 462
G I+ + K L +L PD +++++A A + +V E+ K M
Sbjct: 627 GACKIHKNIEVGEKAAKKLFELN-PDEGGYHVLLANIYASTSKWSKVAEVRKTM 679
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 205/608 (33%), Positives = 313/608 (51%), Gaps = 42/608 (6%)
Query: 51 DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWN 110
DSL+ +G ++ V K G F +D FVG LL YG G L +V VF++M + +V+WN
Sbjct: 19 DSLSVQKGREIHGVVFKLG-FDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDVVSWN 77
Query: 111 SIVSIFGKHGFVEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
S++ +F HGF + + LFCE+ +RS S V V+ + +D G QIH V+K
Sbjct: 78 SVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVK 137
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
G D ++ V N+LV++Y +C + + ++F ++ R+ VSWN II +LA E ALE+
Sbjct: 138 TGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEM 197
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
+ M V PN TF ++ L+ GK IH ++ LE D+FV +AL+D YAK
Sbjct: 198 FRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAK 257
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHV 348
A F++I KNIVSWNA++ +A + L+ +Q G PN TF++V
Sbjct: 258 SGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNV 317
Query: 349 LRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
L + L ++H IR G +V +L YAK G LN+ R
Sbjct: 318 LPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCG----------CLNLARR 367
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
V ++ D VS+NI+I + + E L LF M
Sbjct: 368 VF-----------------------KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGI 404
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+ D +++ ++SAC+ L L G +HGL + + + F+ N L+D Y KCG I
Sbjct: 405 KGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKH-LHTHLFIANALLDFYIKCGRID 463
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
+ K+F ++ R+ +W ++I G+ G A+ F M+ G + D V+ IAVL+AC
Sbjct: 464 LAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACS 523
Query: 585 HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
HGGLV EG + FE M + ++P HY C+VDLL R G ++EA K+I ++P P+A +W
Sbjct: 524 HGGLVEEGKKYFEHM-QVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVW 582
Query: 645 RTFLEGCQ 652
L C+
Sbjct: 583 GALLGACR 590
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 155/522 (29%), Positives = 269/522 (51%), Gaps = 46/522 (8%)
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
V L + +F V+ ++ ++ G +IHG+V K GFD ++ V N+L+ Y C G+ +
Sbjct: 3 VRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVK 62
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF-PNQTTFVYVINSCAGL 255
++F ++ RDVVSWN++IG + + +A+ L+ M++ F PN + V V+ CAGL
Sbjct: 63 RVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGL 122
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
++ + G+ IH V+K L+ V VG+ALVD Y KC ++ + F EIS +N VSWNA+I
Sbjct: 123 EDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAII 182
Query: 316 --LGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMG 368
L Y ++ +F L ++ G +PN TFS +L + +L ++H +R G
Sbjct: 183 TSLAYLERNQDALEMFRL--MIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFG 240
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
E+ +V +L+ YAKSG R++ +N ++N+ G+ N
Sbjct: 241 LESDIFVANALIDMYAKSG---------------RSLQASN----VFNQIGEKN------ 275
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
IVSWN ++A A N ++L + M+A P++ TF ++L AC+++ L
Sbjct: 276 -------IVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLR 328
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G +H +T S D FV N L DMY KCG + + ++F +++ R+ +++ LI
Sbjct: 329 PGKEIHARAIRTG-SSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGY 386
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
+L F EM G K D V+ + V++AC + +++G E+ R + +
Sbjct: 387 SQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKH-LHTH 445
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + ++D ++ G + A K+ +P A W + + G
Sbjct: 446 LFIANALLDFYIKCGRIDLAGKVFRQIPSRDTA-SWNSMILG 486
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 157/593 (26%), Positives = 287/593 (48%), Gaps = 52/593 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLLS-CDSL-NPVE 57
M +R+VVS+NS+I +S G+ +A+ +F M + GF P + +L C L + V
Sbjct: 68 MLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVT 127
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ V+K GL + VG AL+ +YG+ G + + VF+++ ++ V+WN+I++
Sbjct: 128 GRQIHCYVVKTGL-DSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLA 186
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+D + +F ++ V +F ++ L + +FG++IHG ++ G + ++
Sbjct: 187 YLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIF 246
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VAN+L++MY + A +F + +++VSWN ++ A++ A++L +M D
Sbjct: 247 VANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADG 306
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN TF V+ +CA + GK IHA+ I+ D+FV +AL D YAKC L A
Sbjct: 307 EIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLAR 366
Query: 298 LCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F +IS ++ VS+N LI+GY+ ++ S+ L +E+ G + + ++ V+ +
Sbjct: 367 RVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLA 425
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L ++H L +R + ++ +L+ Y K G I +A
Sbjct: 426 ALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRID--------------------LA 465
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
G K+ Q+ D SWN +I G+ + LF+ M+ + D+
Sbjct: 466 G------------KVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSV 513
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT-FVCNMLIDMYGKCGSIGSSVKIFN 531
+++++LSACS + G ++ I + + C ++D+ G+ G I +VK+
Sbjct: 514 SYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYAC--MVDLLGRAGLIEEAVKLIE 571
Query: 532 EM---TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ D NV W AL+ A ++G+ + L + KP +VL+
Sbjct: 572 SLPIEPDANV--WGALLGACRIHGYIE--LAHWAAEHLFKLKPQHSGYYSVLS 620
>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
Length = 763
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 197/658 (29%), Positives = 338/658 (51%), Gaps = 42/658 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
R S N I+ + +A++ F ++ + GF T T+ L+S C L +E G +
Sbjct: 25 RAEQSSNEYITTLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRK 84
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ +LK+ D + +L +YG+ G L + VF+ MP +++V+W S+++ + ++G
Sbjct: 85 IHDHMLKSKSH-PDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNG 143
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + + ++++S V + +F +I S+ D+ G Q+H V+K+ F ++ N
Sbjct: 144 QGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQN 203
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVF 239
+L++MY + I A +F + RD++SW ++I ++ +AL + M +
Sbjct: 204 ALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYL 263
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN+ F V ++C+ L G+ +H IK L DVF G +L D YAKC L A +
Sbjct: 264 PNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVV 323
Query: 300 FSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLA 354
F +I ++V+WNA+I G+A + +I ++ G P+E T +L S
Sbjct: 324 FYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSEL 383
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+Q +Q+H I +MG + V +L+T YAK + DA+ F +
Sbjct: 384 YQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRC------------- 430
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
D+VSWN ++ AC H+ +EV L K M ++ PD T
Sbjct: 431 ------------------NADLVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITL 472
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
++L A ++ ++ +G+ +H KT + + D V N LID+Y KCGS+ ++ KIF+ +
Sbjct: 473 TNVLGASAETVSIEIGNQVHCYALKTGL-NCDISVTNGLIDLYAKCGSLKTARKIFDSVI 531
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+ +V++W++LI G+ + AL+ F+ M L KP+ V + VLTAC H GLV EG +
Sbjct: 532 NPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWQ 591
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L+ M + +G+ P +H C+VDLL R G L EAE I M F P+ ++W+T L C+
Sbjct: 592 LYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAFIHQMAFDPDIVVWKTLLAACK 649
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 159/553 (28%), Positives = 274/553 (49%), Gaps = 35/553 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+RNVVS+ S+I+ YS+ G +AL + M+ G P QFTFG ++ +C SL + G
Sbjct: 124 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 183
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A VLK+ F A AL+ +Y + + + + VF M + L++W S+++ F +
Sbjct: 184 RQLHAHVLKSE-FGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQ 242
Query: 119 HGFVEDCMFLFCELVRSEVAL-TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G+ + + F E++ V L E F V S+ E+G Q+HG+ IK G ++
Sbjct: 243 LGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVF 302
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
SL +MY +C + A +F + D+V+WN II A + +A+ + +M
Sbjct: 303 AGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQG 362
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P++ T ++ +C G +H + K L+ DV V + L+ YAKC L A
Sbjct: 363 LIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAI 422
Query: 298 LCFSEIS-NKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAF 355
F E+ N ++VSWNA++ +F L++L+ + +RP+ T ++VL +S
Sbjct: 423 FFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGAS--- 479
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+ I +G + + Y L K+GL D + N + +Y
Sbjct: 480 ----AETVSIEIGNQVHCYAL--------KTGLNCD-------------ISVTNGLIDLY 514
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G K+ + PD+VSW+ +I A G +E L+LFK MR + P++ TFV
Sbjct: 515 AKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFV 574
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT- 534
+L+ACS + + G L+G ++K I C+ ++D+ + G + + ++M
Sbjct: 575 GVLTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAFIHQMAF 634
Query: 535 DRNVITWTALISA 547
D +++ W L++A
Sbjct: 635 DPDIVVWKTLLAA 647
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 188/665 (28%), Positives = 342/665 (51%), Gaps = 53/665 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM--INRGFEPTQFTF-----GGLLSCDSL 53
MP+R+VVS+NS+IS + + G ++ +FL M GF+ G L CD
Sbjct: 141 MPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDM- 199
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
G Q+ V+K G C D G+ALLG+Y + LD+ +SVF ++P K+ V+W++++
Sbjct: 200 ----GVQVHGLVVKFGFDC-DVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMI 254
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
+ ++ + + LF E+ V +++S + + + L G+++H +K+ F
Sbjct: 255 AGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFG 314
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY-LR 232
+++V + ++MY +C + A+K+ + + S+N II A S+ +AL+ + L
Sbjct: 315 SDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLL 374
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ + F ++ T +N+CA ++ + G+ +H +K+ ++ V +A++D Y KC
Sbjct: 375 LKTGLGF-DEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKA 433
Query: 293 LEGAHLCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
L A F + ++ VSWNA+I + + ++ ++ P++FT+ VL++
Sbjct: 434 LAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKA 493
Query: 352 SLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
Q L ++H II+ G +V +L+ Y K G+I A
Sbjct: 494 CAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKA--------------- 538
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
I++RT E+ +VSWN +I+ + ++ + F M +
Sbjct: 539 ----DKIHDRT-------------EQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGV 581
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PDN+T+ ++L C+ L + LG +H I K E+ SD ++C+ L+DMY KCG++ S
Sbjct: 582 NPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQEL-QSDVYICSTLVDMYSKCGNMQDSQ 640
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+F + +R+ +TW A++ +G + AL+ F M+ + KP+ ++VL AC H G
Sbjct: 641 LMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMG 700
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
LV +G+ F+ M YG++P+ +HY C+VD+L R G + EA ++ MPF +A+IWR
Sbjct: 701 LVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNL 760
Query: 648 LEGCQ 652
L C+
Sbjct: 761 LSVCK 765
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 181/656 (27%), Positives = 310/656 (47%), Gaps = 47/656 (7%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS----CDSLNPVE 57
P + +F+ I S+ + + MI GFEPT F L+ C L+
Sbjct: 45 PPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLD--- 101
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
A + + ++ D +++ Y G +D F +MP + +V+WNS++S F
Sbjct: 102 ----YACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFL 157
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G + +F E+ R V +S V+ ++ + G Q+HGLV+K GFD +++
Sbjct: 158 QNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVV 217
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
++L+ MY +C + + +F ++ ++ VSW+ +I +++ + LEL+ M
Sbjct: 218 TGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVG 277
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V +Q+ + + SCA L LGK +H+ +K+A D+ VG+A +D YAKC + A
Sbjct: 278 VGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQ 337
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQ 356
S + ++ S+NA+I+GYA + LL+ G +E T S L +
Sbjct: 338 KVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNA----- 392
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
C IR E + V G + S + S + AN I +Y
Sbjct: 393 -----CASIRGDLEGRQ-VHGLAVKSISMSN-----------------ICVANAILDMYG 429
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ E L +ER D VSWN +IAAC NG+ +E L F M +R+ PD++T+ S
Sbjct: 430 KCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGS 489
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+L AC+ L G +H I K+ + D+FV L+DMY KCG I + KI + +
Sbjct: 490 VLKACAGRQALNTGMEIHTRIIKSG-MGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQK 548
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+++W A+IS L ++ A + F M +G PD AVL C + V G ++
Sbjct: 549 TMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIH 608
Query: 597 ERMNRSYGVEPEMDHYHC--VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++ + E + D Y C +VD+ + G++++++ + P + + W L G
Sbjct: 609 AQIIKQ---ELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAP-NRDFVTWNAMLCG 660
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 142/481 (29%), Positives = 244/481 (50%), Gaps = 18/481 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLN-PVEG 58
MP ++ S+N+II Y+R AL+ F ++ G + T G L +C S+ +EG
Sbjct: 343 MPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEG 402
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K+ + ++ V A+L +YG+ L E +F+ M R+ V+WN+I++ +
Sbjct: 403 RQVHGLAVKS-ISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQ 461
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G E+ + F ++ S + + ++ V+ + Q L G +IH +IK+G ++ V
Sbjct: 462 NGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFV 521
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA---LAESENFGKALELYLRMSV 235
+LV+MY +C I A+K+ E + +VSWN II L +SE+ K L M V
Sbjct: 522 GAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGV 581
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ P+ T+ V+++CA L LGK IHA++IK L+ DV++ S LVD Y+KC N++
Sbjct: 582 N---PDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQD 638
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
+ L F + N++ V+WNA++ GYA L E +QL +PN TF VLR+
Sbjct: 639 SQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAH 698
Query: 355 FQLLQ--LH---CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PRAVVPA 408
L+ LH ++ G + ++ +SG I +AL V + AV+
Sbjct: 699 MGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWR 758
Query: 409 NIIA--GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
N+++ I+ + + L QL+ D + ++ A G + V E+ K MR +
Sbjct: 759 NLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNK 818
Query: 467 I 467
+
Sbjct: 819 L 819
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
D N +I Y CG + + K F EM +R+V++W ++IS NG +++++ F EM
Sbjct: 114 DVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMG 173
Query: 566 FLGFKPDRVALIAVLTACRHGGLVRE---GMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
G DR +L VL AC G + E G+++ + + +G + ++ ++ + +
Sbjct: 174 RCGVGFDRASLAVVLKAC---GALEECDMGVQVHGLVVK-FGFDCDVVTGSALLGMYAKC 229
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEGC 651
L ++ + + +P N + W + GC
Sbjct: 230 KRLDDSLSVFSELP-EKNWVSWSAMIAGC 257
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 209/730 (28%), Positives = 362/730 (49%), Gaps = 83/730 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDS----LNP 55
MP R + +N ++ + L +F M+ +P + T+ G+L C +
Sbjct: 129 MPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHC 188
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
VE ++ A + +G + FV L+ LY ++G L+ VF+ + ++ V+W +++S
Sbjct: 189 VE--KIHARTITHG-YENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSG 245
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ G E+ + LFC++ S V T F V+ + + + GEQ+HGLV+K GF E
Sbjct: 246 LSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLE 305
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V N+LV +Y + AE++F + RD VS+N++I L++ KALEL+ +M +
Sbjct: 306 TYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCL 365
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D + P+ T ++++C+ + ++GK H+ IK + D+ + AL+D Y KC +++
Sbjct: 366 DCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKT 425
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
AH F +N+V WN +++ Y + F + +Q+ G PN+FT+ +LR+ +
Sbjct: 426 AHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSS 485
Query: 355 FQLL----QLHCLIIRMGYENYEYV----------LGSL--------------------- 379
+ + Q+H +++ G++ YV LG L
Sbjct: 486 LRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAM 545
Query: 380 MTSYAK----------------SGLISDALAFVTALNI--------------PRAVVPA- 408
+ YA+ G+ SD + F +A++ +A V
Sbjct: 546 IAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGY 605
Query: 409 -------NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
N + +Y R G+ + ++ D +SWN +I+ A +G +E L LF
Sbjct: 606 SDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQ 665
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M A +++TF +SA + + N+ LG +H +I KT S+T V N+LI +Y KCG
Sbjct: 666 MSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGH-DSETEVSNVLITLYAKCG 724
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+I + + F EM ++N I+W A+++ +G +AL F +M+ LG P+ V + VL+
Sbjct: 725 NIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLS 784
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC H GLV EG++ F+ M +G+ P+ +HY CVVDLL R G L A + + MP P+A
Sbjct: 785 ACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDA 844
Query: 642 LIWRTFLEGC 651
++ RT L C
Sbjct: 845 MVCRTLLSAC 854
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 154/601 (25%), Positives = 288/601 (47%), Gaps = 44/601 (7%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G +L +LK G FCA+ + L+ LY G LD V+VF++MP + L WN ++ F
Sbjct: 86 DGWKLHGKILKMG-FCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRF 144
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG--EQIHGLVIKNGFDY 174
+ LF +++ +V E ++ GV+ G D+ F E+IH I +G++
Sbjct: 145 VAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGG-GDVPFHCVEKIHARTITHGYEN 203
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
L V N L+++YF+ + SA+K+F ++ RD VSW ++ L++S +A+ L+ +M
Sbjct: 204 SLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMH 263
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
V+P F V+++C ++ +G+ +H V+K + +V +ALV Y++ N
Sbjct: 264 TSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFI 323
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSL 353
A F+ + ++ VS+N+LI G + + L + + L +P+ T + +L +
Sbjct: 324 PAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACS 383
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ L Q H I+ G + + G+L+ Y K I A F +
Sbjct: 384 SVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLST---------- 433
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
E ++V WN+++ A + E ++F M+ I P
Sbjct: 434 ----------------------ETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEP 471
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ +T+ S+L CS L + LG +H + KT + +V ++LIDMY K G + ++KI
Sbjct: 472 NQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGF-QFNVYVSSVLIDMYAKLGKLDHALKI 530
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F + +++V++WTA+I+ + AL F+EM+ G D + + ++AC +
Sbjct: 531 FRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQAL 590
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
+G ++ + S G ++ + +V L R G +++A + F + + W + +
Sbjct: 591 NQGQQIHAQACVS-GYSDDLSVGNALVSLYARCGKVRDAYFAFDKI-FSKDNISWNSLIS 648
Query: 650 G 650
G
Sbjct: 649 G 649
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 197/658 (29%), Positives = 338/658 (51%), Gaps = 42/658 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
R S N I++ + +A++ F ++ + GF T T+ L+S C L +E G +
Sbjct: 25 RAEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKK 84
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ +LK+ D + +L +YG+ L + VF+ MP +++V+W S+++ + ++G
Sbjct: 85 IHDHMLKSKSH-PDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNG 143
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + + ++++S V + +F +I S+ D+ G Q+H V+K+ F ++ N
Sbjct: 144 QGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQN 203
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVF 239
+L++MY + I A +F + RD++SW ++I ++ +AL + M +
Sbjct: 204 ALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYL 263
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN+ F V ++C+ L G+ +H IK L DVF G +L D YAKC L A +
Sbjct: 264 PNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVV 323
Query: 300 FSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLA 354
F +I ++V+WNA+I G+A + +I ++ G P+E T +L S
Sbjct: 324 FYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSEL 383
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+Q +Q+H I +MG + V +L+T YAK + DA+ F +
Sbjct: 384 YQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRC------------- 430
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
D+VSWN ++ AC + +EV L K M ++ PD T
Sbjct: 431 ------------------NADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITL 472
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
++L A ++ ++ +G+ +H KT + + DT V N LID+Y KCGS+ ++ KIF+ M
Sbjct: 473 TNVLGASAETVSIEIGNQVHCYALKTGL-NCDTSVTNGLIDLYAKCGSLKTAHKIFDSMI 531
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+ +V++W++LI G+ + AL+ F+ M L KP+ V + VLTAC H GLV EG +
Sbjct: 532 NPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWK 591
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L+ M + +G+ P +H C+VDLL R G L EAE I M F P+ ++W+T L C+
Sbjct: 592 LYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACK 649
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 282/574 (49%), Gaps = 38/574 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+RNVVS+ S+I+ YS+ G +AL + M+ G P QFTFG ++ +C SL + G
Sbjct: 124 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 183
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A VLK+ F A AL+ +Y + + + + VF M + L++W S+++ F +
Sbjct: 184 RQLHAHVLKSE-FGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQ 242
Query: 119 HGFVEDCMFLFCELVRSEVAL-TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G+ + + F E++ V L E F V S+ E+G Q+HG+ IK G ++
Sbjct: 243 LGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVF 302
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
SL +MY +C + A +F + D+V+WN II A + +A+ + +M
Sbjct: 303 AGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQG 362
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P++ T ++ +C G +H + K L+ DV V + L+ YAKC L A
Sbjct: 363 LIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAI 422
Query: 298 LCFSEIS-NKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAF 355
F E+ N ++VSWNA++ +F L++L+ + +RP+ T ++VL +S
Sbjct: 423 FFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASA-- 480
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
E +G+ + Y A T LN +V N + +Y
Sbjct: 481 --------------ETVSIEIGNQVHCY----------ALKTGLNCDTSVT--NGLIDLY 514
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G K+ + PD+VSW+ +I A G +E L+LFK MR + P++ TFV
Sbjct: 515 AKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFV 574
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT- 534
+L+ACS + + G L+G ++K I+ C+ ++D+ + G + + ++M
Sbjct: 575 GVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAF 634
Query: 535 DRNVITWTALISALGLNG---FAQRALEKFREME 565
D +++ W L++A +G +RA E +++
Sbjct: 635 DPDIVVWKTLLAACKTHGNVDVGKRAAENILKID 668
>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
Length = 969
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 198/660 (30%), Positives = 345/660 (52%), Gaps = 39/660 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M R+VVS+ +I AYS+ G +L++F M+ G P TF +LS C++ + +E G
Sbjct: 276 MKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQG 335
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A V+++ L + V +LLG+Y R ++ S+F+ M + V+W++I+ +
Sbjct: 336 RQIHALVVESSLE-SHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSR 394
Query: 119 H-GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
D + L+ ++ V + V+ + +L+ G+ +H VI++G + +L
Sbjct: 395 EDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDL- 453
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V SLVNMY +C + A K+F + R + WN++I A E + +AL L+ M +
Sbjct: 454 VGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAYQEKDPH-EALHLFREMQPEG 512
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P++ TF+ V+N+C + G++IH +++ + DV V +AL + YAKC +L A
Sbjct: 513 VSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEAR 572
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F + +++VSWN +I Y L +QL G RP++ TF+ +L +
Sbjct: 573 GVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPN 632
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L Q+H I EN ++ L+T YA G +++A I
Sbjct: 633 RLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNA---------------REIFD 677
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
I++ + Q++ D+ W +I A +G+Y++ LEL++ M + ++ D
Sbjct: 678 NIFSNSRQHHR-----------DLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRV 726
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF+S+L+AC+ L +L G ++H + + + ++D V N ++ MYGKCGS + +F +
Sbjct: 727 TFISVLNACAHLSDLRQGQAIHARVMRRGL-ATDVAVANSIVFMYGKCGSFDEASIVFEK 785
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+++ WTALI++ +G ++AL FR + G + + +A+L+AC H GL+ EG
Sbjct: 786 TKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEG 845
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
E F M G+EP M+H+ C+VDLL R GHL AE+ ++ MP N ++ L C+
Sbjct: 846 CEFFASMA-ELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTALLAACR 904
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 172/617 (27%), Positives = 291/617 (47%), Gaps = 48/617 (7%)
Query: 32 MINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGC 90
M RG P + LL+ C L +E +L L D V + +Y + GC
Sbjct: 1 MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG 150
LD V F M R+ +V+W ++ + + G + LF E++ A +FV ++ G
Sbjct: 61 LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSG 120
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM--FKDVEIRDVV 208
LE G QIH LV+++ + ++VANSL+ MY +C W +M F ++ RDVV
Sbjct: 121 CEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRS-WEDSRMQTFARMKRRDVV 179
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SW +IGA ++ F +++L+ M ++ PN TFV +++ C G+ IHA V
Sbjct: 180 SWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALV 239
Query: 269 IKNALEC--DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PT 325
++++LE D+ V + ++ Y KC L+GA F+ + +++VSW +I Y+
Sbjct: 240 VESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSL 299
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMT 381
S+ L E+L G PN TF +L A LL Q+H L++ E++
Sbjct: 300 SLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESH--------- 350
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
VV AN + G+Y+R + ++ L ++ D VSW+
Sbjct: 351 -----------------------VVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWST 387
Query: 442 VIAACAHNGDY-KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
+I AC+ + ++ L L++ M + P +L AC L L G +H + ++
Sbjct: 388 IIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIES 447
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
+ V L++MY KCG++G + K+F+ + +R+ I W ++I+A AL
Sbjct: 448 GL--EGDLVGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAYQEKD-PHEALHL 504
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
FREM+ G PDR+ + VL AC + + G + R+ S G ++ + ++
Sbjct: 505 FREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDS-GFAADVRVATALFNMYA 563
Query: 621 RYGHLKEAEKIITTMPF 637
+ G L EA + +M F
Sbjct: 564 KCGSLGEARGVFDSMVF 580
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/606 (28%), Positives = 297/606 (49%), Gaps = 47/606 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M R+VVS+ +I AYS+ G +L++F M+ G P TF +LS C++ + +E G
Sbjct: 71 MKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQG 130
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGR-HGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ A V+++ L + V +LLG+Y R D + F M R+ +V+W ++ +
Sbjct: 131 RQIHALVVESSLE-SHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYS 189
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G + LF E++ A +FV ++ G LE G QIH LV+++ + L
Sbjct: 190 QDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLD 249
Query: 178 VA--NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ N +NMY +C + A + F ++ RDVVSW +IGA ++ F +L+L+ M +
Sbjct: 250 IGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLL 309
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ PN TFV +++ C G+ IHA V++++LE V V ++L+ Y++C + E
Sbjct: 310 EGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWED 369
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSS--PTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
+ F +S ++ VSW+ +I+ + + S ++ L +L G P S VL +
Sbjct: 370 SRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACG 429
Query: 354 AFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ L+ +H +I G E + V SL+ YAK G + +A +N
Sbjct: 430 SLAELKGGKLVHAHVIESGLEG-DLVGISLVNMYAKCGTVGEARKVFDRIN--------- 479
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
NR+ + WN +I A D E L LF+ M+ + P
Sbjct: 480 ------NRSR-----------------ILWNSMITA-YQEKDPHEALHLFREMQPEGVSP 515
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D TF+++L+AC +L G ++H I + ++D V L +MY KCGS+G + +
Sbjct: 516 DRITFMTVLNACVNAADLENGRTIHTRIVDSG-FAADVRVATALFNMYAKCGSLGEARGV 574
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F+ M R+V++W +I+A + A+ M+ G +PD+ ++L AC +
Sbjct: 575 FDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRL 634
Query: 590 REGMEL 595
+G ++
Sbjct: 635 VDGRQI 640
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 153/579 (26%), Positives = 278/579 (48%), Gaps = 45/579 (7%)
Query: 1 MPDRNVVSFNSIISAYSR-CGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEG 58
M R+ VS+++II A SR + DAL ++ M++ G P +L +C SL ++G
Sbjct: 377 MSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKG 436
Query: 59 AQL-QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+L A V+++GL VG +L+ +Y + G + E VF+ + +S + WNS+++ +
Sbjct: 437 GKLVHAHVIESGL--EGDLVGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAYQ 494
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + + LF E+ V+ +F+ V++ N DLE G IH ++ +GF ++
Sbjct: 495 EKD-PHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVR 553
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VA +L NMY +C + A +F + RDVVSWN +I A + + A+ L M ++
Sbjct: 554 VATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEG 613
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P++ TF ++N+C+ + G+ IH+ + ++ LE D+ + + L+ YA C +L A
Sbjct: 614 MRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAR 673
Query: 298 LCFSEI------SNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLR 350
F I ++++ W ++I Y L E + + TF VL
Sbjct: 674 EIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLN 733
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ H +R G + V+ + GL +D V AN
Sbjct: 734 ACA-------HLSDLRQGQAIHARVM--------RRGLATD-------------VAVANS 765
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
I +Y + G ++E + + + DI W +IA+ A +G ++ L +F+ +R I
Sbjct: 766 IVFMYGKCGSFDEASIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELS 825
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKI 529
N TFV++LSACS + + G + + I + + C L+D+ + G + ++ +
Sbjct: 826 NLTFVAMLSACSHVGLIEEGCEFFASMAELGIEPNMEHHSC--LVDLLARAGHLHTAEEF 883
Query: 530 FNEM-TDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
+ M N I TAL++A ++G +RA ++E L
Sbjct: 884 LSRMPVAANTIVLTALLAACRVHGDVERARRVAEKLEAL 922
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 205/433 (47%), Gaps = 53/433 (12%)
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P++ ++ +C L GK I ++ LE D+ V + ++ Y KC L+GA
Sbjct: 8 PDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAVQT 67
Query: 300 FSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F+ + +++VSW +I Y+ S+ L E+L G PN TF +L A LL
Sbjct: 68 FARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLL 127
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q+H L++ E++ VV AN + G+
Sbjct: 128 EQGRQIHALVVESSLESH--------------------------------VVVANSLLGM 155
Query: 415 YNRTGQYNET-VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
Y+R + ++ ++ ++++R D+VSW ++I A + +G + ++LF+ M P++ T
Sbjct: 156 YSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVT 215
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIFNE 532
FVS+LS C L G +H L+ ++ + S D V N+ I+MY KCG + +V+ F
Sbjct: 216 FVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFAR 275
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
M R+V++WT +I A +G +L+ FREM G P+ V +++L+ C L+ +G
Sbjct: 276 MKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQG 335
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLV----RYGHLKEAEKIITTMPFPPNALIWRTFL 648
++ + VE ++ + V + L+ R +++ + M +++ W T +
Sbjct: 336 RQI-----HALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSV-RDSVSWSTII 389
Query: 649 EGCQR----CRIA 657
C R CR A
Sbjct: 390 MACSREDSHCRDA 402
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 196/641 (30%), Positives = 332/641 (51%), Gaps = 43/641 (6%)
Query: 20 GYVEDALRMFLYMINR-GFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAF 76
GY E+AL +F+ + + G P +F ++ +C L VE GAQL V+++G F D +
Sbjct: 15 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSG-FDQDVY 73
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
VGT+L+ Y ++G ++ VF+ + K+ VTW +I++ + K G + LF ++ +
Sbjct: 74 VGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETN 133
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
V V+ S + LE G+QIH V++ G + ++ V N L++ Y +C + +
Sbjct: 134 VVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGR 193
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
K+F + +++++SW T+I ++ +A++L+ M+ P+ V+ SC L+
Sbjct: 194 KLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLE 253
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
G+ +HA IK LE + FV + L+D YAK + L A F ++ +N++S+NA+I
Sbjct: 254 ALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIE 313
Query: 317 GYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYEN 371
GY+S+ + L +++ + P+ TF +L S + L Q+H LII+ G
Sbjct: 314 GYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSL 373
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
+ +L+ Y+K + DA + ++
Sbjct: 374 DLFAGSALIDVYSKCSYVKDAR--------------------------------HVFEEM 401
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
DIV WN + + + +E L+L+ ++ +R P+ +TF +L++A S L +L G
Sbjct: 402 NEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQ 461
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
H + K + FV N L+DMY KCGSI + K+FN R+V+ W ++IS +
Sbjct: 462 QFHNQLVKMGL-DFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQH 520
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G A+ AL FREM G +P+ V +AVL+AC H G V +G+ F M +G++P +H
Sbjct: 521 GEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMP-GFGIKPGTEH 579
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y CVV LL R G L EA++ I MP P A++WR+ L C+
Sbjct: 580 YACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACR 620
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 154/562 (27%), Positives = 268/562 (47%), Gaps = 50/562 (8%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA-Q 60
++ V++ +II+ Y++CG +L +F M P ++ +LS C L +EG Q
Sbjct: 100 EKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQ 159
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ A VL+ G D V L+ Y + + +F+ M K++++W +++S + ++
Sbjct: 160 IHAYVLRRGTEM-DVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNS 218
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F + M LF E+ R + V+ + + LE G Q+H IK + V N
Sbjct: 219 FDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKN 278
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
L++MY + + A+K+F + ++V+S+N +I + E +ALEL+ M V + P
Sbjct: 279 GLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPP 338
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ TFV ++ A L L K IH +IK + D+F GSAL+D Y+KC ++ A F
Sbjct: 339 SLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVF 398
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLL- 358
E++ K+IV WNA+ GY L LQ +PNEFTF+ ++ ++ L
Sbjct: 399 EEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLR 458
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
Q H +++MG + +V +L+ YAK G I +A
Sbjct: 459 HGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEAR---------------------- 496
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
K+ + D+V WN +I+ A +G+ +E L +F+ M I P+ TFV
Sbjct: 497 ----------KMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFV 546
Query: 476 SLLSACSKLCNLALG----SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
++LSACS + G +S+ G K ++ + C ++ + G+ G + + +
Sbjct: 547 AVLSACSHAGXVEDGLNHFNSMPGFGIKP---GTEHYAC--VVSLLGRSGKLFEAKEFIE 601
Query: 532 EMT-DRNVITWTALISALGLNG 552
+M + I W +L+SA + G
Sbjct: 602 KMPIEPAAIVWRSLLSACRIAG 623
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 137/255 (53%), Gaps = 3/255 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCD-SLNPVE-G 58
M ++NV+S+N++I YS + +AL +F M R F P+ TF LL SL +E
Sbjct: 300 MAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELS 359
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ ++K G+ D F G+AL+ +Y + + + VFE+M K +V WN++ + +
Sbjct: 360 KQIHGLIIKXGV-SLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQ 418
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
H E+ + L+ L S E +F +I SN L G+Q H ++K G D+ V
Sbjct: 419 HLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFV 478
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LV+MY +C I A KMF RDVV WN++I A+ +AL ++ M + +
Sbjct: 479 TNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGI 538
Query: 239 FPNQTTFVYVINSCA 253
PN TFV V+++C+
Sbjct: 539 QPNYVTFVAVLSACS 553
>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 912
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 201/662 (30%), Positives = 347/662 (52%), Gaps = 47/662 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
MP+R+VVS+ +I+S++++ + DAL++F MI G P +FT L SC +L E G
Sbjct: 75 MPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERG 134
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLD----EVVSVFEDMPRKSLVTWNSIVS 114
Q+ S +K GL + FVGT+L+ Y + GC +++S+ +D +V+W +++S
Sbjct: 135 MQIHCSAVKLGLE-MNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKD--GGDVVSWTTMLS 191
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
++G + ++ +++ S V E +FV ++ +S+ L +G+ +H +I G +
Sbjct: 192 SLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAEL 251
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
L++ ++V+MY +C + A K+ DV W T+I ++ +A+ ++ M
Sbjct: 252 NLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDME 311
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL- 293
+ + PN T+ ++N+ + + + LG+ H++VI LE D+++G+ALVD Y KC ++
Sbjct: 312 LSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHIT 371
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL---- 349
A F EI++ N++ W +LI G+A K S L E+ G RPN FT S +L
Sbjct: 372 TNAVKVFREITSPNVMCWTSLIAGFAEKRLEDSFQLFAEMQAAGVRPNSFTMSAILGACS 431
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
++ + LH II+ + V +L+ +YA G+I +A + + +N+ R +
Sbjct: 432 KTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNL-RDSITYT 490
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+A N+ G + +K+L I C ++G I
Sbjct: 491 CLAARLNQKGHHGMALKVL--------------IHMC-NDG----------------IKM 519
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D ++ S LSA + L + G LH K+ + V N L+ +Y KCGSI + +
Sbjct: 520 DEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHS-VSNSLVHLYSKCGSIHDANRA 578
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F ++++ + +W LIS NG AL F +M G KPD + L+++++AC HGGL+
Sbjct: 579 FKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLL 638
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
G+E F M + Y + P++DHY C+VDLL R G L+EA +I M F P++LI +T L
Sbjct: 639 ELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLN 698
Query: 650 GC 651
C
Sbjct: 699 AC 700
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 166/616 (26%), Positives = 276/616 (44%), Gaps = 59/616 (9%)
Query: 50 CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
C+S + EG + + ++K GL D ++ LL LY + + +F++MP + +V+W
Sbjct: 25 CNSNSLKEGICIHSPIIKLGLQ-HDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSW 83
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
+I+S K D + LF ++ S E + + + E G QIH +K
Sbjct: 84 TTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVK 143
Query: 170 NGFDYELLVANSLVNMYFQCA----GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
G + V SLV Y +C W + KD DVVSW T++ +L E+ +G+
Sbjct: 144 LGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGG--DVVSWTTMLSSLVENGKWGE 201
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
A E+Y++M V+PN+ TFV ++ + + GK +HA +I E ++ + +A+VD
Sbjct: 202 AFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVD 261
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK---SSPTSIFLLIELLQLGYRPNE 342
Y+KC + A + ++ W LI G+ S+F +EL G PN
Sbjct: 262 MYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMEL--SGLLPNN 319
Query: 343 FTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
FT+S +L +S + L Q H +I +G E+ Y+ +L+ Y K I+
Sbjct: 320 FTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHIT-------- 371
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
VK+ ++ P+++ W +IA A ++ +L
Sbjct: 372 -----------------------TNAVKVFREITSPNVMCWTSLIAGFAEK-RLEDSFQL 407
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYG 518
F M+AA + P+++T ++L ACSK +L LHG I KT+ + D V N L+D Y
Sbjct: 408 FAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTK-VDIDIAVANALVDTYA 466
Query: 519 KCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
G I + + M R+ IT+T L + L G AL+ M G K D +L +
Sbjct: 467 GVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLAS 526
Query: 579 VLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV----RYGHLKEAEKIITT 634
L+A G + G +L Y V+ H V + LV + G + +A +
Sbjct: 527 FLSAAAGLGTMETGKQL-----HCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKD 581
Query: 635 MPFPPNALIWRTFLEG 650
+ P+A W + G
Sbjct: 582 IS-EPDAFSWNGLISG 596
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 200/654 (30%), Positives = 333/654 (50%), Gaps = 41/654 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
+PD VS++S+++AYS G A++ F M G +F +L C + GAQ
Sbjct: 63 IPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP-DARLGAQ 121
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVF-EDMPRKSLVTWNSIVSIFGKH 119
+ A + G F +D FV AL+ +YG G +D+ VF E ++ V+WN ++S + K+
Sbjct: 122 VHAMAMATG-FGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
D + +F E+V S + TE F V++ + +++E G Q+H +V++ G+D ++ A
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA 240
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+LV+MY + + A +F+ + DVVSWN +I + + +A+EL L+M +
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN T ++ +C+G LG+ IH +IK + D ++G LVD YAK L+ A
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKV 360
Query: 300 FSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F + +++++ NALI G + ++ L EL + G N T + VL+S+ + +
Sbjct: 361 FDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAA 420
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q+H L +++G+ +V+ L+ SY K +SDA
Sbjct: 421 STTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDA---------------------- 458
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
NR + + DI++ +I A + + ++LF M + PD +
Sbjct: 459 -NR---------VFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 508
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
SLL+AC+ L G +H + K + +S D F N L+ Y KCGSI + F+ +
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMS-DAFAGNALVYTYAKCGSIEDAELAFSSLP 567
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+R V++W+A+I L +G +RALE F M G P+ + + +VL AC H GLV E
Sbjct: 568 ERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR 627
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
F M +G++ +HY C++DLL R G L +A +++ +MPF NA IW L
Sbjct: 628 YFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALL 681
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 154/589 (26%), Positives = 279/589 (47%), Gaps = 50/589 (8%)
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYG--RHGCLDEVVSVFEDMPRKSLVTWNSIV 113
+ GA L AS+LK+G A L+ Y R C VF+++P V+W+S+V
Sbjct: 21 LPGAHLHASLLKSGSL---ASFRNHLISFYSKCRRPCCAR--RVFDEIPDPCHVSWSSLV 75
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
+ + +G + F + V E + V+ + D G Q+H + + GF
Sbjct: 76 TAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP---DARLGAQVHAMAMATGFG 132
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEI-RDVVSWNTIIGALAESENFGKALELYLR 232
++ VAN+LV MY + A ++F + + R+ VSWN ++ A +++ G A++++
Sbjct: 133 SDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 192
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M + P + F V+N+C G +N G+ +HA V++ + DVF +ALVD Y K
Sbjct: 193 MVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGR 252
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
++ A + F ++ + ++VSWNALI G + +I LL+++ G PN FT S +L++
Sbjct: 253 VDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKA 312
Query: 352 ---SLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ AF L Q+H +I+ ++ +Y+ L+ YAK+ + DA
Sbjct: 313 CSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAR-------------- 358
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
K+ + D++ N +I+ C+H G + E L LF +R +
Sbjct: 359 ------------------KVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGL 400
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
+ T ++L + + L + +H L K I D V N LID Y KC + +
Sbjct: 401 GVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFI-FDAHVVNGLIDSYWKCSCLSDAN 459
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
++F E + ++I T++I+AL + A++ F EM G +PD L ++L AC
Sbjct: 460 RVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+G ++ + + + + +V + G +++AE +++P
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLP 567
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/537 (24%), Positives = 260/537 (48%), Gaps = 24/537 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MPD +VVS+N++IS G+ A+ + L M G P FT +L +C + G
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ ++K +D ++G L+ +Y ++ LD+ VF+ M + L+ N+++S
Sbjct: 323 RQIHGFMIKANAD-SDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSH 381
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ + LF EL + + + ++ V+ ++ + Q+H L +K GF ++ V
Sbjct: 382 GGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHV 441
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N L++ Y++C+ + A ++F++ D+++ ++I AL++ ++ A++L++ M +
Sbjct: 442 VNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGL 501
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ ++N+CA L GK +HA +IK D F G+ALV YAKC ++E A L
Sbjct: 502 EPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAEL 561
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
FS + + +VSW+A+I G A ++ L ++ G PN T + VL + L
Sbjct: 562 AFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGL 621
Query: 358 LQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ + + G + E ++ ++G + DA+ V ++ +
Sbjct: 622 VDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALL 681
Query: 413 GIYNRTGQYNETVKLLSQ---LERPDIVSWNIVIAAC-AHNGDYKEVLELFKYMRAARIY 468
G +R + E KL ++ + P+ ++++A A G + EV ++ K M+ + I
Sbjct: 682 GA-SRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIK 740
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKT--------EIISSDTFVCNMLIDMY 517
+ +S + K+ +G H + K+ +++S FV N+ +D++
Sbjct: 741 KE--PAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLH 795
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 182/403 (45%), Gaps = 42/403 (10%)
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
A Q + G +HA ++K+ + L+ FY+KC A F EI + VSW+
Sbjct: 15 AAAQALLPGAHLHASLLKSGSLASFR--NHLISFYSKCRRPCCARRVFDEIPDPCHVSWS 72
Query: 313 ALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL-LQLHCLIIRMGYE 370
+L+ Y++ P S ++ G NEF VL+ +L Q+H + + G+
Sbjct: 73 SLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVHAMAMATGFG 132
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ +V +L+ Y G + DA R V +NE +
Sbjct: 133 SDVFVANALVAMYGGFGFMDDA----------RRV---------------FNE-----AD 162
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
ER + VSWN +++A N + +++F M + I P + F +++AC+ N+ G
Sbjct: 163 SER-NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAG 221
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+H ++ + D F N L+DMY K G + + IF +M D +V++W ALIS L
Sbjct: 222 RQVHAMVVRMG-YDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
NG RA+E +M++ G P+ L ++L AC G G ++ M ++ + D
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKA---NADSD 337
Query: 611 HYHCV--VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
Y V VD+ + L +A K+ M F + ++ + GC
Sbjct: 338 DYIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGC 379
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 195/654 (29%), Positives = 332/654 (50%), Gaps = 41/654 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
+PD VS++S+++AYS G A++ F M G +F +L C + GAQ
Sbjct: 63 IPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP-DAQLGAQ 121
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM-PRKSLVTWNSIVSIFGKH 119
+ A + G F +D FV AL+ +YG G +D+ VF++ ++ V+WN ++S + K+
Sbjct: 122 VHAMAMATG-FGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 180
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
D + +F E+V S + TE F V++ + ++++ G Q+H +V++ G++ ++ A
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTA 240
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+LV+MY + + A +F+ + DVVSWN +I + + +A+EL L+M +
Sbjct: 241 NALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLV 300
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN ++ +CAG LG+ IH +IK + D ++G LVD YAK L+ A
Sbjct: 301 PNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKV 360
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F +S+++++ WNALI G + F + L + G N T + VL+S+ + +
Sbjct: 361 FDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAA 420
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q+H L ++G+ +V+ L+ SY K +SDA
Sbjct: 421 SATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDA---------------------- 458
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+++ + DI++ +I A + + ++LF M + PD +
Sbjct: 459 ----------IRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 508
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
SLL+AC+ L G +H + K + +S D F N L+ Y KCGSI + F+ +
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMS-DAFAGNALVYTYAKCGSIEDAELAFSSLP 567
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+R V++W+A+I L +G +RALE F M G P+ + + +VL AC H GLV E
Sbjct: 568 ERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR 627
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
F M +G++ +HY C++DLL R G L +A +++ +MPF NA +W L
Sbjct: 628 YFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALL 681
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 152/589 (25%), Positives = 282/589 (47%), Gaps = 50/589 (8%)
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYG--RHGCLDEVVSVFEDMPRKSLVTWNSIV 113
+ GA L A++LK+G A + L+ Y R C VF+++P V+W+S+V
Sbjct: 21 LPGAHLHANLLKSGFL---ASLRNHLISFYSKCRRPCCAR--RVFDEIPDPCHVSWSSLV 75
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
+ + +G + F + V E + V+ + D + G Q+H + + GF
Sbjct: 76 TAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP---DAQLGAQVHAMAMATGFG 132
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLR 232
++ VAN+LV MY + A ++F + R+ VSWN ++ A +++ G A++++
Sbjct: 133 SDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 192
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M + P + F V+N+C G +N G+ +HA V++ E DVF +ALVD Y K
Sbjct: 193 MVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGR 252
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
++ A + F ++ + ++VSWNALI G + +I LL+++ G PN F S +L++
Sbjct: 253 VDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKA 312
Query: 352 ---SLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ AF L Q+H +I+ ++ +Y+ L+ YAK+ + DA+
Sbjct: 313 CAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAM-------------- 358
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
K+ + D++ WN +I+ C+H G + E +F +R +
Sbjct: 359 ------------------KVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGL 400
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
+ T ++L + + L + +H L +K I D V N LID Y KC + ++
Sbjct: 401 GVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFI-FDAHVVNGLIDSYWKCSCLSDAI 459
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
++F E + ++I T++I+AL + A++ F EM G +PD L ++L AC
Sbjct: 460 RVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 519
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+G ++ + + + + +V + G +++AE +++P
Sbjct: 520 AYEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLP 567
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/537 (23%), Positives = 261/537 (48%), Gaps = 24/537 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MPD +VVS+N++IS G+ A+ + L M + G P F +L +C + G
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG 322
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ ++K +D ++G L+ +Y ++ LD+ + VF+ M + L+ WN+++S
Sbjct: 323 RQIHGFMIKANAD-SDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSH 381
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ +F L + + + ++ V+ ++ + Q+H L K GF ++ V
Sbjct: 382 GGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHV 441
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N L++ Y++C+ + A ++F++ D+++ ++I AL++ ++ A++L++ M +
Sbjct: 442 VNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGL 501
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ ++N+CA L GK +HA +IK D F G+ALV YAKC ++E A L
Sbjct: 502 EPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAEL 561
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----RSSL 353
FS + + +VSW+A+I G A ++ L ++ G PN T + VL + L
Sbjct: 562 AFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGL 621
Query: 354 AFQLLQLHCLIIRM-GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ + + M G + E ++ ++G + DA+ V ++ +
Sbjct: 622 VDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALL 681
Query: 413 GIYNRTGQYNETVKLLSQ---LERPDIVSWNIVIAAC-AHNGDYKEVLELFKYMRAARIY 468
G +R + E KL ++ + P+ ++++A A +G + EV ++ K M+ + I
Sbjct: 682 GA-SRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIK 740
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKT--------EIISSDTFVCNMLIDMY 517
+ +S + K+ +G H + K+ +++S ++ N+ +D++
Sbjct: 741 KE--PAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLH 795
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 180/405 (44%), Gaps = 42/405 (10%)
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
A Q + G +HA ++K+ + + L+ FY+KC A F EI + VSW+
Sbjct: 15 AAAQALLPGAHLHANLLKSGFLASLR--NHLISFYSKCRRPCCARRVFDEIPDPCHVSWS 72
Query: 313 ALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL-LQLHCLIIRMGYE 370
+L+ Y++ P S ++ G NEF VL+ QL Q+H + + G+
Sbjct: 73 SLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQVHAMAMATGFG 132
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ +V +L+ Y G + DA +++ G
Sbjct: 133 SDVFVANALVAMYGGFGFMDDARR-------------------VFDEAGS---------- 163
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
ER + VSWN +++A N + +++F M + I P + F +++AC+ N+ G
Sbjct: 164 -ER-NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAG 221
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+H ++ + D F N L+DMY K G + + IF +M D +V++W ALIS L
Sbjct: 222 RQVHAMVVRMG-YEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
NG RA+E +M+ G P+ L ++L AC G G ++ M ++ + D
Sbjct: 281 NGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKA---NADSD 337
Query: 611 HYHCV--VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
Y V VD+ + L +A K+ M + ++W + GC
Sbjct: 338 DYIGVGLVDMYAKNHFLDDAMKVFDWMSH-RDLILWNALISGCSH 381
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 198/660 (30%), Positives = 338/660 (51%), Gaps = 45/660 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLL-SCDSLNPVE-G 58
P + + +I Y G+ E+A+ ++ M+ + + + F F +L +C + G
Sbjct: 60 PKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVG 119
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ V+K G F +DA V T+LL +YG CLD+ F+ MP + +V W+SIV F +
Sbjct: 120 GKVHGRVIKCG-FESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQ 178
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + +F +++ V + + V S L G +HG V++ + +
Sbjct: 179 NGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASL 238
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL+ MY + ++SAE++F++V R W +I +S F +AL ++ +M +
Sbjct: 239 NNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKM 298
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV-FVGSALVDFYAKCDNLEGAH 297
PNQ T V V+ +CA L G+S+H VI+ A++ ++ F+G AL++ YA NL H
Sbjct: 299 EPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCH 358
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLR--SSLA 354
F I K I+SWN LI + P ++ L +++ G P+ ++ + L +++
Sbjct: 359 KVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTIS 418
Query: 355 FQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
F L Q+H II+ G N ++V +L+ YAK G FV + N
Sbjct: 419 FSQLGAQIHGYIIKTGNFN-DFVQNALIDMYAKCG-------FVHSAN------------ 458
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K+ +++ +V+WN +I + NG E + LF M + D
Sbjct: 459 -------------KMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKL 505
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF+S++ ACS L L G +H + + D+++ L DMY KCG + + +F+
Sbjct: 506 TFLSVIQACSHLGYLEKGKWVHHKLIMYGL-RKDSYLDTALTDMYSKCGELQMAHGVFDR 564
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
M++R++++W+ +I+ G++G + F +M G KP+ + + +L+AC H G V EG
Sbjct: 565 MSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEG 624
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M+ +GVEP+ DH+ C+VDLL R G L A +IIT++PFP N+ IW L GC+
Sbjct: 625 KLYFNSMSE-FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCR 683
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 151/579 (26%), Positives = 272/579 (46%), Gaps = 33/579 (5%)
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A + GL T L+ Y + G + VF+ P+ W ++ +
Sbjct: 18 TQLHAHLFITGLH-RHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVW 76
Query: 119 HGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
GF E+ + L+ E+V + + ++ F V+ S DL G ++HG VIK GF+ + +
Sbjct: 77 GGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAV 136
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V SL+ MY + + + A K F + IRDVV+W++I+ ++ + L+++ +M +
Sbjct: 137 VETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEA 196
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ T + V +C+ L + LG+S+H V++ +E + + ++L+ Y K +L A
Sbjct: 197 VEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAE 256
Query: 298 LCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + + W +I Y S ++ + ++ + PN+ T VL
Sbjct: 257 RLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVL------- 309
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
C R+G K G A++ P + +Y
Sbjct: 310 -----CACARLG--------------RVKEGRSVHGFVIRRAMD-PELDFLGPALMELYA 349
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
TG + K+ ++ I+SWN +I+ NG +E L LF M+ + PD+Y+ S
Sbjct: 350 DTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLAS 409
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LSAC + LG+ +HG I KT + + FV N LIDMY KCG + S+ K+F ++ ++
Sbjct: 410 SLSACGTISFSQLGAQIHGYIIKTG--NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEK 467
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+++TW ++I NG++ A+ F +M K D++ ++V+ AC H G + +G +
Sbjct: 468 SLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVH 527
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
++ YG+ + + D+ + G L+ A + M
Sbjct: 528 HKLIM-YGLRKDSYLDTALTDMYSKCGELQMAHGVFDRM 565
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 249/499 (49%), Gaps = 15/499 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP R+VV+++SI+ + + G + L MF MI+ EP T + +C L + G
Sbjct: 161 MPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLG 220
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V++ + ++A + +L+ +YG+ G L +FE++P + W ++S + +
Sbjct: 221 RSVHGYVVRREIE-SNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQ 279
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL-L 177
G ++ + +F ++ ++ + + VGV+ + ++ G +HG VI+ D EL
Sbjct: 280 SGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDF 339
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ +L+ +Y + K+F+ ++ + ++SWNT+I + +AL L+++M
Sbjct: 340 LGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQG 399
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P+ + +++C + S LG IH +IK D FV +AL+D YAKC + A+
Sbjct: 400 LMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSAN 458
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F +I K++V+WN++I G++ S +I L ++ + ++ TF V+++
Sbjct: 459 KMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLG 518
Query: 357 LLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L+ +H +I G Y+ +L Y+K G + A ++ R++V +++
Sbjct: 519 YLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMS-ERSIVSWSVMI 577
Query: 413 GIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
Y GQ N T+ L +Q+ +P+ +++ +++AC+H G +E F M +
Sbjct: 578 AGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVE 637
Query: 469 PDNYTFVSLLSACSKLCNL 487
P + F ++ S+ +L
Sbjct: 638 PKHDHFACMVDLLSRAGDL 656
>gi|224106537|ref|XP_002314200.1| predicted protein [Populus trichocarpa]
gi|222850608|gb|EEE88155.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 203/663 (30%), Positives = 332/663 (50%), Gaps = 48/663 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M +RNVVS+ ++ +C VE L +FL MI GF P +F G ++ +C N VEG
Sbjct: 114 MLERNVVSWTLMVCGAIQCEEVELGLEVFLEMIRDGFVPNEFGLGSVMKACG--NSVEGR 171
Query: 60 QLQASV----LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
V LK G+ + FV ++L Y + G + VFE + + WN+++
Sbjct: 172 VFGLCVHCFALKIGME-RNPFVSCSVLSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGG 230
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ + G+ + + + R + + + +F+ VI G S D FG QIHGL+I++ +
Sbjct: 231 YAQCGYGFEAIVTASLMRRKGIFMDKYTFINVIQGCSLLGDFNFGRQIHGLIIRSELELS 290
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V N+L++MYF+ G+ S +FK + RDVV+WNT+ G+ ++ E+ L+ +
Sbjct: 291 APVMNALMDMYFKNGGMKSGLVVFKKMHDRDVVTWNTVFGSFSQHEDPKDIASLFHSFLL 350
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ PN TF + C L N LG + L + + SAL++ +++C +E
Sbjct: 351 TSMRPNHITFSILFRECGKLLNLDLGLQFCCLALHFGLFDEANITSALINMFSRCGKMEM 410
Query: 296 AHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL----R 350
AHL F ++NI+ WN LI GY + ++ +LLQLG NE+TFS+VL R
Sbjct: 411 AHLVFKSKVSENIIIWNELISGYKLNCCDAEALKTFYDLLQLGVEANEYTFSNVLETCSR 470
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
S Q+H + + G+ ++ YV SL+ Y K GL+ D+L
Sbjct: 471 SENQLMNRQIHGVAFKSGFASHGYVCSSLIKGYIKCGLLDDSL----------------- 513
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
K+ + L+RPD+ +W +I+A H G E + + A PD
Sbjct: 514 ---------------KVFNMLDRPDMAAWGTMISAFVHQGWDCEAIRSLNLLIEAGEKPD 558
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ S+LS+C+ S+H LI K FV + ++D Y KCG I S+ F
Sbjct: 559 EFILGSILSSCASTVAYCQTKSVHSLIIKLGF-EGHVFVASAVLDAYAKCGDIQSAKMAF 617
Query: 531 NEM-TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
N+ +V+ + A+I A +G AL+ + +M+ +P + ++V+ AC H G V
Sbjct: 618 NQSCKSSDVVIYNAMIIAYAHHGRVVEALDTYDKMKLANLQPSQATFVSVIAACGHIGHV 677
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
+G LF+ M+ YG+EP D Y C+VD+ R G+L++A++II ++P+P I R+ L
Sbjct: 678 EKGCRLFKSMDL-YGMEPSPDIYGCLVDMFSRNGYLEDAKQIIESLPYPAWPAILRSLLS 736
Query: 650 GCQ 652
GC+
Sbjct: 737 GCR 739
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 243/532 (45%), Gaps = 40/532 (7%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ ++K G F +D FV L+ Y + L +VF+ M +++V+W +V
Sbjct: 72 GTQIHGYIIKLG-FSSDVFVSNNLIKFYAKGAVLRYGFNVFDGMLERNVVSWTLMVCGAI 130
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE-QDLEFGEQIHGLVIKNGFDYEL 176
+ VE + +F E++R E V+ N + FG +H +K G +
Sbjct: 131 QCEEVELGLEVFLEMIRDGFVPNEFGLGSVMKACGNSVEGRVFGLCVHCFALKIGMERNP 190
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V+ S+++ Y + I +AE++F+ +E DV WN +IG A+ +A+ M
Sbjct: 191 FVSCSVLSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYGFEAIVTASLMRRK 250
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+F ++ TF+ VI C+ L + G+ IH +I++ LE V +AL+D Y K ++
Sbjct: 251 GIFMDKYTFINVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMNALMDMYFKNGGMKSG 310
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSS--- 352
+ F ++ ++++V+WN + ++ P I L L RPN TFS + R
Sbjct: 311 LVVFKKMHDRDVVTWNTVFGSFSQHEDPKDIASLFHSFLLTSMRPNHITFSILFRECGKL 370
Query: 353 LAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L L LQ CL + GL +A NI A++
Sbjct: 371 LNLDLGLQFCCLALHF-------------------GLFDEA-------NITSALI----- 399
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+++R G+ + +I+ WN +I+ N E L+ F + + +
Sbjct: 400 -NMFSRCGKMEMAHLVFKSKVSENIIIWNELISGYKLNCCDAEALKTFYDLLQLGVEANE 458
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
YTF ++L CS+ N + +HG+ K+ +S +VC+ LI Y KCG + S+K+FN
Sbjct: 459 YTFSNVLETCSRSENQLMNRQIHGVAFKSG-FASHGYVCSSLIKGYIKCGLLDDSLKVFN 517
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ ++ W +ISA G+ A+ + G KPD L ++L++C
Sbjct: 518 MLDRPDMAAWGTMISAFVHQGWDCEAIRSLNLLIEAGEKPDEFILGSILSSC 569
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 197/443 (44%), Gaps = 51/443 (11%)
Query: 153 NEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNT 212
N + G QIHG +IK GF ++ V+N+L+ Y + A + +F + R+VVSW
Sbjct: 65 NSKSFILGTQIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVFDGMLERNVVSWTL 124
Query: 213 IIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA-GLQNSILGKSIHAKVIKN 271
++ + E LE++L M D PN+ V+ +C ++ + G +H +K
Sbjct: 125 MVCGAIQCEEVELGLEVFLEMIRDGFVPNEFGLGSVMKACGNSVEGRVFGLCVHCFALKI 184
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI 331
+E + FV +++ FYAK ++ A F + ++ WNA+I GYA +
Sbjct: 185 GMERNPFVSCSVLSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYGFEAIVTA 244
Query: 332 ELLQL-GYRPNEFTFSHVLRS-SLAFQL---LQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
L++ G +++TF +V++ SL Q+H LIIR E V+ +LM Y K+
Sbjct: 245 SLMRRKGIFMDKYTFINVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMNALMDMYFKN 304
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
G + L + ++ D+V+WN V +
Sbjct: 305 GGMKSGLV--------------------------------VFKKMHDRDVVTWNTVFGSF 332
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG-----SSLH-GLIKKT 500
+ + D K++ LF + P++ TF L C KL NL LG +LH GL +
Sbjct: 333 SQHEDPKDIASLFHSFLLTSMRPNHITFSILFRECGKLLNLDLGLQFCCLALHFGLFDEA 392
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
I S+ LI+M+ +CG + + +F N+I W LIS LN AL+
Sbjct: 393 NITSA-------LINMFSRCGKMEMAHLVFKSKVSENIIIWNELISGYKLNCCDAEALKT 445
Query: 561 FREMEFLGFKPDRVALIAVLTAC 583
F ++ LG + + VL C
Sbjct: 446 FYDLLQLGVEANEYTFSNVLETC 468
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 180/406 (44%), Gaps = 43/406 (10%)
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
C ++ ILG IH +IK DVFV + L+ FYAK L F + +N+VSW
Sbjct: 63 CENSKSFILGTQIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVFDGMLERNVVSW 122
Query: 312 NALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRS---SLAFQLLQL--HCLII 365
++ G + + + +E+++ G+ PNEF V+++ S+ ++ L HC +
Sbjct: 123 TLMVCGAIQCEEVELGLEVFLEMIRDGFVPNEFGLGSVMKACGNSVEGRVFGLCVHCFAL 182
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
++G E +V S+++ YAK G I A
Sbjct: 183 KIGMERNPFVSCSVLSFYAKLGDIGAA--------------------------------E 210
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
++ LE D+ WN +I A G E + MR I+ D YTF++++ CS L
Sbjct: 211 RVFESLEEVDVGCWNAMIGGYAQCGYGFEAIVTASLMRRKGIFMDKYTFINVIQGCSLLG 270
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
+ G +HGLI ++E+ S V N L+DMY K G + S + +F +M DR+V+TW +
Sbjct: 271 DFNFGRQIHGLIIRSELELSAP-VMNALMDMYFKNGGMKSGLVVFKKMHDRDVVTWNTVF 329
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL-FERMNRSYG 604
+ + + F +P+ + + C G L+ + L F + +G
Sbjct: 330 GSFSQHEDPKDIASLFHSFLLTSMRPNHITFSILFREC--GKLLNLDLGLQFCCLALHFG 387
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ E + ++++ R G ++ A + + N +IW + G
Sbjct: 388 LFDEANITSALINMFSRCGKMEMAHLVFKS-KVSENIIIWNELISG 432
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 81/194 (41%), Gaps = 14/194 (7%)
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
I D+ LS C + LG+ +HG I K SSD FV N LI Y K +
Sbjct: 49 IGKDSVALSKALSFCENSKSFILGTQIHGYIIKLGF-SSDVFVSNNLIKFYAKGAVLRYG 107
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC--- 583
+F+ M +RNV++WT ++ + LE F EM GF P+ L +V+ AC
Sbjct: 108 FNVFDGMLERNVVSWTLMVCGAIQCEEVELGLEVFLEMIRDGFVPNEFGLGSVMKACGNS 167
Query: 584 ---RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
R GL L M R+ V V+ + G + AE++ ++ +
Sbjct: 168 VEGRVFGLCVHCFALKIGMERNPFVSCS------VLSFYAKLGDIGAAERVFESLE-EVD 220
Query: 641 ALIWRTFLEGCQRC 654
W + G +C
Sbjct: 221 VGCWNAMIGGYAQC 234
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 200/654 (30%), Positives = 333/654 (50%), Gaps = 41/654 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
+PD VS++S+++AYS G A++ F M G +F +L C + GAQ
Sbjct: 63 IPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVP-DARLGAQ 121
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVF-EDMPRKSLVTWNSIVSIFGKH 119
+ A + G F +D FV AL+ +YG G +D+ VF E ++ V+WN ++S + K+
Sbjct: 122 VHAMAMATG-FGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
D + +F E+V S + TE F V++ + +++E G Q+H +V++ G+D ++ A
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA 240
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+LV+MY + + A +F+ + DVVSWN +I + + +A+EL L+M +
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN T ++ +C+G LG+ IH +IK + D ++G LVD YAK L+ A
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKV 360
Query: 300 FSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F + +++++ NALI G + ++ L EL + G N T + VL+S+ + +
Sbjct: 361 FDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAA 420
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q+H L +++G+ +V+ L+ SY K +SDA
Sbjct: 421 STTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDA---------------------- 458
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
NR + + DI++ +I A + + ++LF M + PD +
Sbjct: 459 -NR---------VFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 508
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
SLL+AC+ L G +H + K + +S D F N L+ Y KCGSI + F+ +
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMS-DAFAGNALVYTYAKCGSIEDAELAFSSLP 567
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+R V++W+A+I L +G +RALE F M G P+ + + +VL AC H GLV E
Sbjct: 568 ERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR 627
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
F M +G++ +HY C++DLL R G L +A +++ +MPF NA IW L
Sbjct: 628 YFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALL 681
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/537 (24%), Positives = 260/537 (48%), Gaps = 24/537 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MPD +VVS+N++IS G+ A+ + L M G P FT +L +C + G
Sbjct: 263 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ ++K +D ++G L+ +Y ++ LD+ VF+ M + L+ N+++S
Sbjct: 323 RQIHGFMIKANAD-SDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSH 381
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ + LF EL + + + ++ V+ ++ + Q+H L +K GF ++ V
Sbjct: 382 GGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHV 441
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N L++ Y++C+ + A ++F++ D+++ ++I AL++ ++ A++L++ M +
Sbjct: 442 VNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGL 501
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ ++N+CA L GK +HA +IK D F G+ALV YAKC ++E A L
Sbjct: 502 EPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAEL 561
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
FS + + +VSW+A+I G A ++ L ++ G PN T + VL + L
Sbjct: 562 AFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGL 621
Query: 358 LQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ + + G + E ++ ++G + DA+ V ++ +
Sbjct: 622 VDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALL 681
Query: 413 GIYNRTGQYNETVKLLSQ---LERPDIVSWNIVIAAC-AHNGDYKEVLELFKYMRAARIY 468
G +R + E KL ++ + P+ ++++A A G + EV ++ K M+ + I
Sbjct: 682 GA-SRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIK 740
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKT--------EIISSDTFVCNMLIDMY 517
+ +S + K+ +G H + K+ +++S FV N+ +D++
Sbjct: 741 KE--PAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLH 795
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 182/403 (45%), Gaps = 42/403 (10%)
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
A Q + G +HA ++K+ + L+ FY+KC A F EI + VSW+
Sbjct: 15 AAAQALLPGAHLHASLLKSGSLASFR--NHLISFYSKCRRPCCARRFFDEIPDPCHVSWS 72
Query: 313 ALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL-LQLHCLIIRMGYE 370
+L+ Y++ P S ++ G NEF VL+ +L Q+H + + G+
Sbjct: 73 SLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVHAMAMATGFG 132
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ +V +L+ Y G + DA R V +NE +
Sbjct: 133 SDVFVANALVAMYGGFGFMDDA----------RRV---------------FNE-----AD 162
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
ER + VSWN +++A N + +++F M + I P + F +++AC+ N+ G
Sbjct: 163 SER-NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAG 221
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+H ++ + D F N L+DMY K G + + IF +M D +V++W ALIS L
Sbjct: 222 RQVHAMVVRMG-YDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
NG RA+E +M++ G P+ L ++L AC G G ++ M ++ + D
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKA---NADSD 337
Query: 611 HYHCV--VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
Y V VD+ + L +A K+ M F + ++ + GC
Sbjct: 338 DYIGVGLVDMYAKNHFLDDARKVFDWM-FHRDLILCNALISGC 379
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 197/661 (29%), Positives = 325/661 (49%), Gaps = 71/661 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGL---LSCDSLNPVE 57
M R+VV +N ++ AY +A+ +F GF P T L + C N +E
Sbjct: 821 MAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKK-NILE 879
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q +A K L +Y G ++ WN +S F
Sbjct: 880 LKQFKAYATK--------------LFMYDDDG--------------SDVIVWNKALSRFL 911
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G + + F +++ S VA +FV ++ ++ LE G+QIHG+V+++G D +
Sbjct: 912 QRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVS 971
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N L+NMY + + A +F + D++SWNT+I S ++ +++ + D
Sbjct: 972 VGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDS 1031
Query: 238 VFPNQTTFVYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ P+Q T V+ +C+ L+ L IHA +K + D FV +AL+D Y+K +E A
Sbjct: 1032 LLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEA 1091
Query: 297 HLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F ++ SWNA++ GY S P ++ L I + + G R ++ T + +++
Sbjct: 1092 EFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGL 1151
Query: 356 ----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
Q Q+H ++++ G+ + + SG++
Sbjct: 1152 VGLKQGKQIHAVVVKRGFN---------LDLFVTSGVLD--------------------- 1181
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y + G+ ++ S++ PD V+W +I+ C NG + L + MR +++ PD
Sbjct: 1182 --MYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDE 1239
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
YTF +L+ ACS L L G +H I K + D FV L+DMY KCG+I + +F
Sbjct: 1240 YTFATLVKACSLLTALEQGRQIHANIVKLNC-AFDPFVMTSLVDMYAKCGNIEDARGLFK 1298
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
R + +W A+I L +G A+ AL+ F+ M+ G PDRV I VL+AC H GLV E
Sbjct: 1299 RTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSE 1358
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
E F M ++YG+EPE++HY C+VD L R G ++EAEK+I++MPF +A ++RT L C
Sbjct: 1359 AYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNAC 1418
Query: 652 Q 652
+
Sbjct: 1419 R 1419
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 143/589 (24%), Positives = 261/589 (44%), Gaps = 64/589 (10%)
Query: 2 PD--RNVVSFNSIISAYS-RCGYVEDALRMFLYMINRGFEPTQFTFGGL--LSCDSLNPV 56
PD R++V++N+I+SA + D +F + T+ T + + S +P
Sbjct: 718 PDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPS 777
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
L +K GL D FV AL+ +Y + G + E +F+ M + +V WN ++ +
Sbjct: 778 ASESLHGYAVKIGLQW-DVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAY 836
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ M LF E R+ + + + + ++++ L +K Y
Sbjct: 837 VDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNI--------LELKQFKAY-- 886
Query: 177 LVANSLVNMYFQCAGIWSAEKMFK-DVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
A K+F D + DV+ WN + + +A++ ++ M
Sbjct: 887 ------------------ATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMIN 928
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V + TFV ++ AGL LGK IH V+++ L+ V VG+ L++ Y K ++
Sbjct: 929 SRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSR 988
Query: 296 AHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F +++ +++SWN +I G S S+ + + LL+ P++FT + VLR+
Sbjct: 989 ARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRA--- 1045
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
C + GY Y+ + K+G++ D +FV+ I +
Sbjct: 1046 -------CSSLEGGY----YLATQIHACAMKAGVVLD--SFVSTALI-----------DV 1081
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y++ G+ E L + D+ SWN ++ +GD+ + L L+ M+ + D T
Sbjct: 1082 YSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITL 1141
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
V+ A L L G +H ++ K + D FV + ++DMY KCG + S+ ++F+E+
Sbjct: 1142 VNAAKAAGGLVGLKQGKQIHAVVVKRG-FNLDLFVTSGVLDMYLKCGEMESARRVFSEIP 1200
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ + WT +IS NG + AL + +M +PD ++ AC
Sbjct: 1201 SPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKAC 1249
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/549 (22%), Positives = 243/549 (44%), Gaps = 58/549 (10%)
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI--RDVVSWNTI 213
DL G++ H ++ +G + V N+L+ MY +C + SA K+F RD+V+WN I
Sbjct: 671 DLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAI 730
Query: 214 IGALA-ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
+ ALA ++ L+ + +V + T V C + +S+H +K
Sbjct: 731 LSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIG 790
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLI 331
L+ DVFV ALV+ YAK + A + F ++ +++V WN ++ Y ++ L
Sbjct: 791 LQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFS 850
Query: 332 ELLQLGYRPNEFTFSHVLR----SSLAFQLLQLHCLIIRMGYENYE----YVLGSLMTSY 383
E + G+RP++ T + R +L Q ++ + + V ++ +
Sbjct: 851 EFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRF 910
Query: 384 AKSG----------------LISDALAFVTALNI----------------------PRAV 405
+ G + D L FV L + + V
Sbjct: 911 LQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVV 970
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
N + +Y + G + + Q+ D++SWN +I+ C +G + + +F ++
Sbjct: 971 SVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRD 1030
Query: 466 RIYPDNYTFVSLLSACSKL-CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+ PD +T S+L ACS L L + +H K ++ D+FV LID+Y K G +
Sbjct: 1031 SLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVV-LDSFVSTALIDVYSKRGKME 1089
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
+ +F ++ +W A++ ++G +AL + M+ G + D++ L+ A
Sbjct: 1090 EAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAA- 1148
Query: 585 HGGLV--REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
GGLV ++G ++ + + G ++ V+D+ ++ G ++ A ++ + +P P+ +
Sbjct: 1149 -GGLVGLKQGKQIHAVVVKR-GFNLDLFVTSGVLDMYLKCGEMESARRVFSEIP-SPDDV 1205
Query: 643 IWRTFLEGC 651
W T + GC
Sbjct: 1206 AWTTMISGC 1214
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 188/607 (30%), Positives = 309/607 (50%), Gaps = 33/607 (5%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L C SL E Q+ V KNGL+ + F T L+ L+ R+G +DE VFE + K
Sbjct: 44 LERCSSLK--ELRQILPLVFKNGLY-QEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
V +++++ F K ++ + F + +V +F ++ +E +L G++IHGL
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
++K+GF +L L NMY +C + A K+F + RD+VSWNTI+ +++ A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
LE+ M + + P+ T V V+ + + L+ +GK IH +++ + V + +ALVD
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTF 345
YAKC +LE A F + +N+VSWN++I Y +P L+ + +L G +P + +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 346 SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
L + L+ I ++ E L + R V
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVE----------------------------LGLDRNV 372
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
N + +Y + + + + +L+ +VSWN +I A NG + L F MR+
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR 432
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ PD +T+VS+++A ++L +HG++ ++ + + FV L+DMY KCG+I
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRS-CLDKNVFVTTALVDMYAKCGAIMI 491
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ IF+ M++R+V TW A+I G +GF + ALE F EM+ KP+ V ++V++AC H
Sbjct: 492 ARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSH 551
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GLV G++ F M +Y +E MDHY +VDLL R G L EA I MP P ++
Sbjct: 552 SGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYG 611
Query: 646 TFLEGCQ 652
L CQ
Sbjct: 612 AMLGACQ 618
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 223/413 (53%), Gaps = 9/413 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+R++VS+N+I++ YS+ G AL M M +P+ T +L + +L + G
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ +++G F + + TAL+ +Y + G L+ +F+ M +++V+WNS++ + +
Sbjct: 256 KEIHGYAMRSG-FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ ++ M +F +++ V T+ S +G +H ++ DLE G IH L ++ G D + V
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY +C + +A MF ++ R +VSWN +I A++ AL + +M V
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T+V VI + A L + K IH V+++ L+ +VFV +ALVD YAKC + A L
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQL 357
F +S +++ +WNA+I GY + + L E +Q G +PN TF V+ + L
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGL 554
Query: 358 LQLHCLIIRMGYENYEYVL-----GSLMTSYAKSGLISDALAFVTALNIPRAV 405
++ M ENY L G+++ ++G +++A F+ + + AV
Sbjct: 555 VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 186/604 (30%), Positives = 305/604 (50%), Gaps = 33/604 (5%)
Query: 50 CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
C S+ + Q+ V+KNGL+ F T L+ L+ ++G ++E VFE + K +
Sbjct: 59 CTSMKELH--QIIPLVIKNGLYNEHLF-QTKLVSLFSKYGSINEAARVFEPIDDKLDALY 115
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
++++ + K+ +E + C + +V +F ++ + DL+ G++IHG +I
Sbjct: 116 HTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLIT 175
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
N F + +VNMY +C I A KMF + RD+VSWNTII +++ KALEL
Sbjct: 176 NSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALEL 235
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
LRM + P+ T V V+ + A + ++GKSIH I+ V + +AL D Y+K
Sbjct: 236 VLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSK 295
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHV 348
C ++E A L F + K +VSWN+++ GY P + E +L+ G P T
Sbjct: 296 CGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEA 355
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
L + L+ + + FV LN+ +
Sbjct: 356 LHACADLGDLERGKFVHK----------------------------FVDQLNLGSDISVM 387
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N + +Y++ + + + + L VSWN +I A NG E L F M++ +
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMK 447
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD++T VS++ A ++L +HGLI ++ + + FV L+DMY KCG+I + K
Sbjct: 448 PDSFTMVSVIPALAELSVTRHAKWIHGLIIRS-CLDKNIFVTTALVDMYSKCGAIHMARK 506
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F+ ++DR+VITW A+I G +G + AL+ F +M+ +P+ + ++V++AC H GL
Sbjct: 507 LFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGL 566
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
V EG+ F+ M + YG+EP MDHY +VDLL R G +KEA I MP P ++
Sbjct: 567 VDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXX 626
Query: 649 EGCQ 652
C+
Sbjct: 627 GACK 630
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 237/474 (50%), Gaps = 14/474 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL--SCDSLNPVEG 58
MP+R++VS+N+II+ +S+ G+ + AL + L M + G P T +L + D + G
Sbjct: 208 MPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVG 267
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ ++ G F + TAL +Y + G ++ +F+ M +K++V+WNS++ + +
Sbjct: 268 KSIHGYAIRAG-FAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 326
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G E + +F +++ + T + + +H ++ DLE G+ +H V + ++ V
Sbjct: 327 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISV 386
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY +C + A +F ++ R VSWN +I A++ +AL + M +
Sbjct: 387 MNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGM 446
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T V VI + A L + K IH +I++ L+ ++FV +ALVD Y+KC + A
Sbjct: 447 KPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARK 506
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVL----RSSL 353
F IS++++++WNA+I GY + + L + ++ G PN+ T+ V+ S L
Sbjct: 507 LFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGL 566
Query: 354 AFQ-LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ L + G E G+++ ++G I +A F+ + I +
Sbjct: 567 VDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXX 626
Query: 413 G---IYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC-AHNGDYKEVLELFKYM 462
G I+ + K L +L PD +++++A A + +V E+ K M
Sbjct: 627 GACKIHKNIEVGEKAAKKLFELN-PDEGGYHVLLANIYASTSKWSKVAEVRKTM 679
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 211/679 (31%), Positives = 346/679 (50%), Gaps = 59/679 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE----PTQFTFGGLLS--CD----SL 53
+ S+NSIIS Y R G A ++F M E P ++TF L++ C L
Sbjct: 207 KTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGL 266
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
+E Q+ A + K+ F D +VG+AL+ + R+G +D +FE M ++ VT N ++
Sbjct: 267 TLLE--QMLARIEKSS-FVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLM 323
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLE----FGEQIHGLVIK 169
+ E+ +F E+ + V + SS+ ++ + +L+ G+++H +I+
Sbjct: 324 VGLARQHQGEEAAKIFKEM-KDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIR 382
Query: 170 NGF-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
N D +L+ N+LVN+Y +C I +A +F+ + +D VSWN+II L +E F +A+
Sbjct: 383 NALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVA 442
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
+ M + + P++ + + ++SCA L +LG+ IH + IK L+ DV V +AL+ YA
Sbjct: 443 CFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYA 502
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALI--LGYASKSSPTSIFLLIELLQLGYRPNEFTFS 346
+ D +E F + + VSWN+ I L + S +I +E++Q G++PN TF
Sbjct: 503 ETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFI 562
Query: 347 HVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
++L + + LL Q+H LI++ + + +L+ Y K + D
Sbjct: 563 NILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEI-------- 614
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
I++R ER D VSWN +I+ HNG + + L M
Sbjct: 615 -----------IFSRMS------------ERRDEVSWNAMISGYIHNGILHKAMGLVWLM 651
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
D++T ++LSAC+ + L G +H + + ++ V + L+DMY KCG
Sbjct: 652 MQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRA-CLEAEVVVGSALVDMYAKCGK 710
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
I + + F M RN+ +W ++IS +G +AL+ F +M+ G PD V + VL+A
Sbjct: 711 IDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSA 770
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H GLV EG E F+ M Y + P ++H+ C+VDLL R G +K+ E+ I TMP PNAL
Sbjct: 771 CSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNAL 830
Query: 643 IWRTFLEGCQRCRIAKYDT 661
IWRT L C CR +T
Sbjct: 831 IWRTILGAC--CRANSRNT 847
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 143/479 (29%), Positives = 248/479 (51%), Gaps = 19/479 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL------N 54
M DRN V+ N ++ +R E+A ++F M + E ++ LLS +
Sbjct: 311 MDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDL-VEINASSYAVLLSAFTEFSNLKEG 369
Query: 55 PVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+G ++ A +++N L +G AL+ LY + +D S+F+ MP K V+WNSI+S
Sbjct: 370 KRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIIS 429
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ E+ + F + R+ + ++ S + + ++ + G+QIHG IK G D
Sbjct: 430 GLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDL 489
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE-NFGKALELYLRM 233
++ V+N+L+ +Y + + +K+F + D VSWN+ IGALA SE + +A++ +L M
Sbjct: 490 DVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEM 549
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
PN+ TF+ ++++ + L LG+ IHA ++K+++ D + + L+ FY KC+ +
Sbjct: 550 MQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQM 609
Query: 294 EGAHLCFSEIS-NKNIVSWNALILGYASKSSPTSIFLLIEL-LQLGYRPNEFTFSHVLRS 351
E + FS +S ++ VSWNA+I GY L+ L +Q G R ++FT + VL +
Sbjct: 610 EDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSA 669
Query: 352 SLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ L ++H IR E V +L+ YAK G I A F + + R +
Sbjct: 670 CASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPV-RNIYS 728
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLER----PDIVSWNIVIAACAHNGDYKEVLELFKYM 462
N + Y R G + +KL +Q+++ PD V++ V++AC+H G E E FK M
Sbjct: 729 WNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSM 787
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 180/678 (26%), Positives = 320/678 (47%), Gaps = 64/678 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-- 57
MP +N+VS++ ++S Y++ G ++A +F +I+ G P + G L +C L P
Sbjct: 100 MPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLK 159
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGR-HGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G ++ + K+ + +D + L+ +Y +D+ VFE++ K+ +WNSI+S+
Sbjct: 160 LGMEIHGLISKSP-YASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISV 218
Query: 116 FGKHGFVEDCMFLFCELVRSEVAL----TESSFVGVIHGLSNEQD--LEFGEQIHGLVIK 169
+ + G LF + R L E +F ++ + D L EQ+ + K
Sbjct: 219 YCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEK 278
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
+ F +L V ++LV+ + + I SA+ +F+ ++ R+ V+ N ++ LA +A ++
Sbjct: 279 SSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKI 338
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK----SIHAKVIKNAL-ECDVFVGSALV 284
+ M D+V N +++ ++++ N GK +HA +I+NAL + + +G+ALV
Sbjct: 339 FKEMK-DLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALV 397
Query: 285 DFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEF 343
+ YAKC+ ++ A F + +K+ VSWN++I G ++ + + G P++F
Sbjct: 398 NLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKF 457
Query: 344 TFSHVLRS--SLAFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
+ L S SL + +L Q+H I+ G + V +L+T YA++ +
Sbjct: 458 SVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCME--------- 508
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+Y + L+ + D VSWN I A A VL+
Sbjct: 509 --------------------EYQKVFFLMPEY---DQVSWNSFIGALA--TSEASVLQAI 543
Query: 460 KY---MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
KY M A P+ TF+++LSA S L L LG +H LI K ++ D + N L+
Sbjct: 544 KYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHS-VADDNAIENTLLAF 602
Query: 517 YGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
YGKC + IF+ M++ R+ ++W A+IS NG +A+ M G + D
Sbjct: 603 YGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFT 662
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
L VL+AC + GME+ R+ +E E+ +VD+ + G + A + M
Sbjct: 663 LATVLSACASVATLERGMEVHACAIRA-CLEAEVVVGSALVDMYAKCGKIDYASRFFELM 721
Query: 636 PFPPNALIWRTFLEGCQR 653
P N W + + G R
Sbjct: 722 PV-RNIYSWNSMISGYAR 738
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 133/539 (24%), Positives = 259/539 (48%), Gaps = 35/539 (6%)
Query: 51 DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWN 110
DS + QL + K GL +D F L+ ++ R G L +F++MP+K+LV+W+
Sbjct: 51 DSCTVEDAHQLHLQIYKTGL-TSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWS 109
Query: 111 SIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN--EQDLEFGEQIHGLVI 168
+VS + ++G ++ LF ++ + + + + L+ G +IHGL+
Sbjct: 110 CLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLIS 169
Query: 169 KNGFDYELLVANSLVNMYFQC-AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKAL 227
K+ + +++++N L++MY C A I A ++F++++++ SWN+II + A
Sbjct: 170 KSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAF 229
Query: 228 ELYLRMSVDIV----FPNQTTFVYVINSCAGLQNS--ILGKSIHAKVIKNALECDVFVGS 281
+L+ M + PN+ TF ++ L + L + + A++ K++ D++VGS
Sbjct: 230 KLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGS 289
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPN 341
ALV +A+ ++ A + F ++ ++N V+ N L++G A + + + ++ N
Sbjct: 290 ALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEIN 349
Query: 342 EFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
+++ +L + F L+ R G E + Y LI +AL V
Sbjct: 350 ASSYAVLLSAFTEFSNLKEG---KRKGQEVHAY-------------LIRNALVDVW---- 389
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
++ N + +Y + + + + D VSWN +I+ HN ++E + F
Sbjct: 390 ---ILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHT 446
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
MR + P ++ +S LS+C+ L + LG +HG K + D V N L+ +Y +
Sbjct: 447 MRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGL-DLDVSVSNALLTLYAETD 505
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLN-GFAQRALEKFREMEFLGFKPDRVALIAV 579
+ K+F M + + ++W + I AL + +A++ F EM G+KP+RV I +
Sbjct: 506 CMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINI 564
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/504 (22%), Positives = 232/504 (46%), Gaps = 41/504 (8%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
+E Q+H + K G ++ N+LVN++ + + SA+K+F ++ +++VSW+ ++
Sbjct: 55 VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSG 114
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALE 274
A++ +A L+ + + PN + +C L ++L G IH + K+
Sbjct: 115 YAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYA 174
Query: 275 CDVFVGSALVDFYAKCD-NLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL 333
D+ + + L+ Y+ C +++ A F EI K SWN++I Y + S F L
Sbjct: 175 SDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSS 234
Query: 334 LQ-----LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
+Q L RPNE+TF L+ + C ++ G E +L + S
Sbjct: 235 MQREATELNCRPNEYTFC---------SLVTVACSLVDCGLTLLEQMLARIEKS------ 279
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
+FV L + A+V + R G + + Q++ + V+ N ++ A
Sbjct: 280 -----SFVKDLYVGSALVSG------FARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLAR 328
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA----LGSSLHGLIKKTEIIS 504
+E ++FK M+ + + ++ LLSA ++ NL G +H + + ++
Sbjct: 329 QHQGEEAAKIFKEMKDL-VEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVD 387
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
+ N L+++Y KC +I ++ IF M ++ ++W ++IS L N + A+ F M
Sbjct: 388 VWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTM 447
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
G P + ++I+ L++C G + G ++ + G++ ++ + ++ L
Sbjct: 448 RRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKC-GLDLDVSVSNALLTLYAETDC 506
Query: 625 LKEAEKIITTMPFPPNALIWRTFL 648
++E +K+ MP + + W +F+
Sbjct: 507 MEEYQKVFFLMP-EYDQVSWNSFI 529
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
C + LH I KT + +SD F CN L++++ + G++ S+ K+F+EM +N+++W+ L
Sbjct: 53 CTVEDAHQLHLQIYKTGL-TSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCL 111
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG--LVREGMELFERMNRS 602
+S NG A FR + G P+ A+ + L AC+ G +++ GME+ +++S
Sbjct: 112 VSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKS 171
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 194/655 (29%), Positives = 330/655 (50%), Gaps = 43/655 (6%)
Query: 7 VSFNSIISAYSRCGYVEDALRMFLYMINRG---FEPTQFTFGGLLSCDSLNPVE-GAQLQ 62
+S NS I+ + + +AL F + + EP+ + +L+C ++ ++ G ++
Sbjct: 45 LSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYV-NLILACTNVRSLKYGKRIH 103
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+LK+ D + +L +YG+ G L + F+ M +S+V+W ++S + ++G
Sbjct: 104 DHILKSNCQ-PDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQE 162
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
D + ++ +++RS + +F +I D++ G Q+HG VIK+G+D+ L+ N+L
Sbjct: 163 NDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNAL 222
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF-PN 241
++MY + I A +F + +D++SW ++I + +AL L+ M V+ PN
Sbjct: 223 ISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPN 282
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ F V ++C L G+ I K L +VF G +L D YAK L A F
Sbjct: 283 EFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFY 342
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL---RSSLAF-QL 357
+I + ++VSWNA+I A+ +I+ +++ +G P++ TF ++L S + Q
Sbjct: 343 QIESPDLVSWNAIIAALANSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQG 402
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+Q+H II+MG + V SL+T Y K + DA N+ I
Sbjct: 403 MQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAF---------------NVFKDIS-- 445
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
E ++VSWN +++AC+ + E LFK M + PDN T ++
Sbjct: 446 --------------ENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTI 491
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L C++L +L +G+ +H K+ ++ D V N LIDMY KCG + + +F+ + +
Sbjct: 492 LGTCAELVSLEVGNQVHCFSVKSGLV-VDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPD 550
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+++W++LI G Q AL FR M LG +P+ V + VL+AC H GLV EG L+
Sbjct: 551 IVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYN 610
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M G+ P +H C+VDLL R G L EAE I F P+ +W+T L C+
Sbjct: 611 TMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCK 665
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 162/594 (27%), Positives = 275/594 (46%), Gaps = 52/594 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
M R+VVS+ +IS YS+ G DA+ M++ M+ G+ P Q TFG ++ C + + G
Sbjct: 141 MQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLG 200
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL V+K+G + AL+ +Y + G + VF + K L++W S+++ F +
Sbjct: 201 GQLHGHVIKSG-YDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQ 259
Query: 119 HGFVEDCMFLFCELVRSEV-ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G+ + ++LF ++ R V E F V + EFG QI G+ K G +
Sbjct: 260 LGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVF 319
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
SL +MY + + SA++ F +E D+VSWN II ALA S+ +A+ + +M
Sbjct: 320 AGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSD-VNEAIYFFCQMIHMG 378
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P+ TF+ ++ +C G IH+ +IK L+ V ++L+ Y KC NL A
Sbjct: 379 LMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAF 438
Query: 298 LCFSEIS-NKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAF 355
F +IS N N+VSWNA++ + P F L +L+ +P+ T + +L +
Sbjct: 439 NVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAEL 498
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L Q+HC + KSGL+ D V +N +
Sbjct: 499 VSLEVGNQVHCFSV-------------------KSGLVVD-------------VSVSNRL 526
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y + G + + PDIVSW+ +I A G +E L LF+ MR + P+
Sbjct: 527 IDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNE 586
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
T++ +LSACS + + G L+ ++ I + ++D+ + G + +
Sbjct: 587 VTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIK 646
Query: 532 EMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ D ++ W L+++ +G A+RA E L P A + +L+
Sbjct: 647 KTGFDPDITMWKTLLASCKTHGNVDIAERAAEN-----ILKLDPSNSAALVLLS 695
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/651 (29%), Positives = 326/651 (50%), Gaps = 39/651 (5%)
Query: 8 SFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQASVL 66
++N +I ++ G AL +L M+ G P ++TF ++ +C L V+ ++ +
Sbjct: 25 AWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETV 84
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
D FVG++L+ LY +G L + +F+++P+K V WN +++ + K+G + +
Sbjct: 85 NLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAI 144
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
+F E+ SE+ +F V+ ++E L+ G Q+HG+ + G + + VAN+L+ MY
Sbjct: 145 KIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMY 204
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+C + +A K+F D+VSWN II ++ G+A L+ M + P+ TF
Sbjct: 205 SKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFA 264
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
+ L + K IH +I++A+ DVF+ SAL+D Y KC ++E A + S+
Sbjct: 265 SFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSF 324
Query: 307 NIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLH 361
+ V +I GY + + ++ L+Q +P TFS + + L +LH
Sbjct: 325 DTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELH 384
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
II+ + +V +++ YAK G + ++ ++NR
Sbjct: 385 GSIIKTKLDEKCHVGSAILDMYAKCGRL-------------------DLACRVFNR---- 421
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
+ D + WN +I +C+ NG E + LF+ M D + LSAC
Sbjct: 422 ---------ITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSAC 472
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
+ L L G +HGL+ K + SD + + LIDMY KCG++ S ++F+ M +RN ++W
Sbjct: 473 ANLPALHYGKEIHGLMIKGP-LRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSW 531
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
++ISA G +G + L F EM G +PD V + +++AC H G V EG+ + M
Sbjct: 532 NSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTE 591
Query: 602 SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
YG+ M+HY CV D+ R G L EA + I +MPFPP+A +W T L C
Sbjct: 592 EYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACH 642
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 150/567 (26%), Positives = 270/567 (47%), Gaps = 45/567 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+P ++ V +N +++ Y + G +A+++FL M + +P TF +LS C S ++ G
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL + GL D+ V LL +Y + CL +F+ P+ LV+WN I+S + +
Sbjct: 179 TQLHGIAVSCGLEL-DSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQ 237
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + LF ++ + + +F + ++ L+ ++IHG +I++ ++ +
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFL 297
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++L+++YF+C + A+K+ D V T+I + +ALE + + + +
Sbjct: 298 KSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P TF + + AGL LGK +H +IK L+ VGSA++D YAKC L+ A
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+ I+ K+ + WN++I + P +I L ++ G R + + S L +
Sbjct: 418 VFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPA 477
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L ++H L+I+ + Y SL+ YAK G LN R V
Sbjct: 478 LHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCG----------NLNFSRRV-------- 519
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++R + NE VSWN +I+A ++GD KE L LF M I PD+ T
Sbjct: 520 -FDRMQERNE-------------VSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVT 565
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFN 531
F+ ++SAC + G + L+ + I + + + C + DM+G+ G + + + N
Sbjct: 566 FLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYAC--VADMFGRAGRLDEAFETIN 623
Query: 532 EMT-DRNVITWTALISALGLNGFAQRA 557
M + W L+ A ++G + A
Sbjct: 624 SMPFPPDAGVWGTLLGACHIHGNVELA 650
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 142/567 (25%), Positives = 259/567 (45%), Gaps = 34/567 (5%)
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
+Y R G L + ++F + WN ++ F G + + +++ + V+ + +
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
F V+ + ++ G+ +H V G ++ V +SL+ +Y + + A+ +F ++
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
+D V WN ++ ++ + G A++++L M + PN TF V++ CA LG
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS- 322
+H + LE D V + L+ Y+KC L+ A F ++VSWN +I GY
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL-HCLIIRMGYENYEYVLGSLMT 381
+ L ++ G +P+ TF+ L +LL L HC I GY V ++
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFL--PCVNELLSLKHCKEIH-GYIIRHAV---VLD 294
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
+ KS LI IY + K+L Q D V
Sbjct: 295 VFLKSALID-----------------------IYFKCRDVEMAQKILCQSSSFDTVVCTT 331
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I+ NG KE LE F+++ R+ P + TF S+ A + L L LG LHG I KT+
Sbjct: 332 MISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTK 391
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
+ V + ++DMY KCG + + ++FN +T+++ I W ++I++ NG A+ F
Sbjct: 392 -LDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLF 450
Query: 562 REMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR 621
R+M G + D V++ L+AC + + G E+ M + + ++ ++D+ +
Sbjct: 451 RQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKG-PLRSDLYAESSLIDMYAK 509
Query: 622 YGHLKEAEKIITTMPFPPNALIWRTFL 648
G+L + ++ M N + W + +
Sbjct: 510 CGNLNFSRRVFDRMQ-ERNEVSWNSII 535
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 213/730 (29%), Positives = 353/730 (48%), Gaps = 87/730 (11%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-----DSLNPVE 57
+R+V S+N +I + +F M+ G P +TF G+L + N V+
Sbjct: 121 NRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVK 180
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ + G F + V L+ LY ++G ++ VF + K +VTW +++S
Sbjct: 181 --QVHSRTFYYG-FDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLS 237
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G E+ + LFC++ SE+ T V+ + Q E GEQ+H LVIK GF E
Sbjct: 238 QNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETY 297
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N LV +Y + + SAE++F + RD VS+N++I L + +ALEL+ +M D
Sbjct: 298 VCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDC 357
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P+ T ++++CA + G +H+ IK + D+ + +L+D Y+KC ++E AH
Sbjct: 358 LKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAH 417
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTF----------- 345
F +NIV WN +++ Y + + F + +Q+ G PN+FT+
Sbjct: 418 KFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLG 477
Query: 346 ---------SHVLRSSLAFQL-----------------LQLHCLIIRMGYENYEYVLGSL 379
+HV+++ FQL L L I+R E+ ++
Sbjct: 478 ALYLGEQIHTHVIKT--GFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAM 535
Query: 380 MTSYAKSGLISDAL-------------------------AFVTALNIPRAVVPANIIAG- 413
+ Y + + S+AL A + AL + + + AG
Sbjct: 536 IAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGF 595
Query: 414 ------------IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
+Y R G+ E ++ + +SWN +++ A +G ++E L++F
Sbjct: 596 GADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVR 655
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M + +T+ S +SA + L N+ G +H ++ KT S+ V N LI +Y K G
Sbjct: 656 MLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGY-DSEREVSNSLISLYAKSG 714
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
SI + + FN+M++RNVI+W A+I+ +G AL F EM+ G P+ V + VL+
Sbjct: 715 SISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLS 774
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC H GLV+EG++ FE M + + + P+ +HY CVVDLL R G L A + I MP P +A
Sbjct: 775 ACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADA 834
Query: 642 LIWRTFLEGC 651
+IWRT L C
Sbjct: 835 MIWRTLLSAC 844
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/583 (26%), Positives = 283/583 (48%), Gaps = 58/583 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
M R+ VS+NS+IS + G+ + AL +F M +P T LLS C S+ + +G
Sbjct: 322 MNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL + +K G+ AD + +LL LY + ++ F +++V WN ++ +G+
Sbjct: 382 MQLHSHAIKAGM-SADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQ 440
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ D +F ++ + + ++ ++ ++ L GEQIH VIK GF + V
Sbjct: 441 LDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYV 500
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ L++MY + + A ++ + + DVVSW +I + + F +AL+L+ M +
Sbjct: 501 CSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGI 560
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ F I++CAG++ G+ IHA+ D+ + +AL+ YA+C ++ A+L
Sbjct: 561 QFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYL 620
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF-- 355
F +I +KN +SWN+L+ G A ++ + + +L+ N FT+ + ++ +
Sbjct: 621 AFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLAN 680
Query: 356 --QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q Q+H ++++ GY++ V SL++ YAKSG ISDA
Sbjct: 681 IKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAW-------------------- 720
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+ + + +++SWN +I + +G E L LF+ M+ I P++ T
Sbjct: 721 ------------REFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVT 768
Query: 474 FVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
FV +LSACS + + G +H L+ K+E +VC ++D+ G+ G + +
Sbjct: 769 FVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSE-----HYVC--VVDLLGRAGQLDRA 821
Query: 527 VKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
++ EM + + W L+SA ++ +RA E+E
Sbjct: 822 MEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELE 864
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 158/641 (24%), Positives = 302/641 (47%), Gaps = 60/641 (9%)
Query: 26 LRMFLYMINRG----FEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTAL 81
+++ +M RG ++ + G L+ SL E +L + K+G F + + +L
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSL--FETMRLHCRISKSG-FDGEPLLIDSL 99
Query: 82 LGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF--GKHGFVEDCMFLFCELVRSEVAL 139
+ Y RHG V VF++ +S+ +WN ++ +F K F C LF ++ +
Sbjct: 100 VDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFC--LFRRMLAEGITP 157
Query: 140 TESSFVGVIHG-LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
+F GV+ + + + +Q+H GFD LVAN L+++Y + I SA+K+
Sbjct: 158 NGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKV 217
Query: 199 FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
F + ++D+V+W +I L+++ +A+ L+ M +FP V+++ +Q
Sbjct: 218 FNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLF 277
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
LG+ +H VIK + +V + LV Y++ L A FS +++++ VS+N+LI G
Sbjct: 278 ELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGL 337
Query: 319 ASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYE 373
+ S ++ L ++ + +P+ T + +L + + L QLH I+ G
Sbjct: 338 VQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADI 397
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
+ GSL+ Y+K + A F E
Sbjct: 398 ILEGSLLDLYSKCADVETAHKFFLT--------------------------------TET 425
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
+IV WN+++ A + + E+F+ M+ + P+ +T+ S+L C+ L L LG +
Sbjct: 426 ENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQI 485
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H + KT + +VC++LIDMY K G + +++I + + +V++WTA+I+ +
Sbjct: 486 HTHVIKTG-FQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDM 544
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
AL+ F EME+ G + D + + ++AC +R+G ++ + + + G ++ +
Sbjct: 545 FSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQ-SYAAGFGADLSINN 603
Query: 614 CVVDLLVRYGHLKEA----EKIITTMPFPPNALIWRTFLEG 650
++ L R G ++EA EKI N + W + + G
Sbjct: 604 ALISLYARCGRIQEAYLAFEKI-----GDKNNISWNSLVSG 639
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 213/730 (29%), Positives = 353/730 (48%), Gaps = 87/730 (11%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-----DSLNPVE 57
+R+V S+N +I + +F M+ G P +TF G+L + N V+
Sbjct: 121 NRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVK 180
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ + G F + V L+ LY ++G ++ VF + K +VTW +++S
Sbjct: 181 --QVHSRTFYYG-FDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLS 237
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G E+ + LFC++ SE+ T V+ + Q E GEQ+H LVIK GF E
Sbjct: 238 QNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETY 297
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N LV +Y + + SAE++F + RD VS+N++I L + +ALEL+ +M D
Sbjct: 298 VCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDC 357
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P+ T ++++CA + G +H+ IK + D+ + +L+D Y+KC ++E AH
Sbjct: 358 LKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAH 417
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTF----------- 345
F +NIV WN +++ Y + + F + +Q+ G PN+FT+
Sbjct: 418 KFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLG 477
Query: 346 ---------SHVLRSSLAFQL-----------------LQLHCLIIRMGYENYEYVLGSL 379
+HV+++ FQL L L I+R E+ ++
Sbjct: 478 ALYLGEQIHTHVIKT--GFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAM 535
Query: 380 MTSYAKSGLISDAL-------------------------AFVTALNIPRAVVPANIIAG- 413
+ Y + + S+AL A + AL + + + AG
Sbjct: 536 IAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGF 595
Query: 414 ------------IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
+Y R G+ E ++ + +SWN +++ A +G ++E L++F
Sbjct: 596 GADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVR 655
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M + +T+ S +SA + L N+ G +H ++ KT S+ V N LI +Y K G
Sbjct: 656 MLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGY-DSEREVSNSLISLYAKSG 714
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
SI + + FN+M++RNVI+W A+I+ +G AL F EM+ G P+ V + VL+
Sbjct: 715 SISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLS 774
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC H GLV+EG++ FE M + + + P+ +HY CVVDLL R G L A + I MP P +A
Sbjct: 775 ACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADA 834
Query: 642 LIWRTFLEGC 651
+IWRT L C
Sbjct: 835 MIWRTLLSAC 844
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 153/583 (26%), Positives = 283/583 (48%), Gaps = 58/583 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
M R+ VS+NS+IS + G+ + AL +F M +P T LLS C S+ + +G
Sbjct: 322 MNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL + +K G+ AD + +LL LY + ++ F +++V WN ++ +G+
Sbjct: 382 MQLHSHAIKAGM-SADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQ 440
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ D +F ++ + + ++ ++ ++ L GEQIH VIK GF + V
Sbjct: 441 LDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYV 500
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ L++MY + + A ++ + + DVVSW +I + + F +AL+L+ M +
Sbjct: 501 CSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGI 560
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ F I++CAG++ G+ IHA+ D+ + +AL+ YA+C ++ A+L
Sbjct: 561 QFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYL 620
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF-- 355
F +I +KN +SWN+L+ G A ++ + + +L+ N FT+ + ++ +
Sbjct: 621 AFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLAN 680
Query: 356 --QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q Q+H ++++ GY++ V SL++ YAKSG ISDA
Sbjct: 681 IKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAW-------------------- 720
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+ + + +++SWN +I + +G E L LF+ M+ I P++ T
Sbjct: 721 ------------REFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVT 768
Query: 474 FVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
FV +LSACS + + G +H L+ K+E +VC ++D+ G+ G + +
Sbjct: 769 FVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSE-----HYVC--VVDLLGRAGQLDRA 821
Query: 527 VKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
++ EM + + W L+SA ++ +RA E+E
Sbjct: 822 MEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELE 864
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 158/641 (24%), Positives = 302/641 (47%), Gaps = 60/641 (9%)
Query: 26 LRMFLYMINRG----FEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTAL 81
+++ +M RG ++ + G L+ SL E +L + K+G F + + +L
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSL--FETMRLHCRISKSG-FDGEPLLIDSL 99
Query: 82 LGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF--GKHGFVEDCMFLFCELVRSEVAL 139
+ Y RHG V VF++ +S+ +WN ++ +F K F C LF ++ +
Sbjct: 100 VDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFC--LFRRMLAEGITP 157
Query: 140 TESSFVGVIHG-LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
+F GV+ + + + +Q+H GFD LVAN L+++Y + I SA+K+
Sbjct: 158 NGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKV 217
Query: 199 FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
F + ++D+V+W +I L+++ +A+ L+ M +FP V+++ +Q
Sbjct: 218 FNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLF 277
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
LG+ +H VIK + +V + LV Y++ L A FS +++++ VS+N+LI G
Sbjct: 278 ELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGL 337
Query: 319 ASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYE 373
+ S ++ L ++ + +P+ T + +L + + L QLH I+ G
Sbjct: 338 VQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADI 397
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
+ GSL+ Y+K + A F E
Sbjct: 398 ILEGSLLDLYSKCADVETAHKFFLX--------------------------------TET 425
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
+IV WN+++ A + + E+F+ M+ + P+ +T+ S+L C+ L L LG +
Sbjct: 426 ENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQI 485
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H + KT + +VC++LIDMY K G + +++I + + +V++WTA+I+ +
Sbjct: 486 HTHVIKTG-FQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDM 544
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
AL+ F EME+ G + D + + ++AC +R+G ++ + + + G ++ +
Sbjct: 545 FSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQ-SYAAGFGADLSINN 603
Query: 614 CVVDLLVRYGHLKEA----EKIITTMPFPPNALIWRTFLEG 650
++ L R G ++EA EKI N + W + + G
Sbjct: 604 ALISLYARCGRIQEAYLAFEKI-----GDKNNISWNSLVSG 639
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 199/653 (30%), Positives = 335/653 (51%), Gaps = 45/653 (6%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQASVLK 67
+N +I ++ G + AL + M+ G P ++TF ++ +C LN V ++ ++
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174
Query: 68 NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMF 127
F D FVG++L+ Y +GC+ + +F+ MP K V WN +++ + K+G ++
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234
Query: 128 LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYF 187
+F E+ R+E +F V+ ++E + FG Q+HGLV+ +G + + VAN+L+ MY
Sbjct: 235 VFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYA 294
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF-- 245
+C ++ A ++F + D+V+WN +I ++ +A L+ M + P+ TF
Sbjct: 295 KCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSS 354
Query: 246 -VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
+ +++ A L+ GK IH +I+N + DVF+ SAL+D Y KC ++E A F + +
Sbjct: 355 FLPLLSEGATLRQ---GKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRT 411
Query: 305 NKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----Q 359
+IV A+I GY + + ++ + LLQ R N T + VL + L +
Sbjct: 412 PVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKE 471
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
LH I++ G+ YV ++M YAK G + LA T + I
Sbjct: 472 LHGHILKNGHGGSCYVGSAIMDMYAKCGRLD--LAHQTFIGI------------------ 511
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
D V WN +I +C+ NG +E ++LF+ M A D + + LS
Sbjct: 512 ------------SDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALS 559
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
AC+ L L G +H + + SD F + LIDMY KCG++ + ++F+ M ++N +
Sbjct: 560 ACANLPALHYGKEIHAFMMRGAF-RSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEV 618
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W ++I+A G +G + +L F M G +PD V +A+++AC H G V EG+ F M
Sbjct: 619 SWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCM 678
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G+ M+HY C+VDL R G L EA +I +MPF P+A +W T L C+
Sbjct: 679 TEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACR 731
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 156/567 (27%), Positives = 276/567 (48%), Gaps = 45/567 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP ++ V +N +++ Y + G ++A +F+ M P TF +LS C S + G
Sbjct: 208 MPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFG 267
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+QL V+ +GL D+ V LL +Y + G L + +F+ MP+ LVTWN ++S + +
Sbjct: 268 SQLHGLVVSSGLE-MDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQ 326
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF+++ LF E++ + + +F + LS L G++IH +I+NG ++ +
Sbjct: 327 NGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFL 386
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++L+++YF+C + A K+F D+V +I + ALE++ + + +
Sbjct: 387 KSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERM 446
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N T V+ +CAGL LGK +H ++KN +VGSA++D YAKC L+ AH
Sbjct: 447 RANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQ 506
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F IS+K+ V WN++I + P +I L ++ G + + + S L S L
Sbjct: 507 TFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAAL--SACANL 564
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTS--YAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
LH G E + +++ S +A+S LI +Y
Sbjct: 565 PALH-----YGKEIHAFMMRGAFRSDLFAESALID-----------------------MY 596
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
++ G + ++ +E + VSWN +IAA ++G K+ L LF M I PD+ TF+
Sbjct: 597 SKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFL 656
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTE----IISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+++SAC + G +H TE + + + C ++D++G+ G + + + N
Sbjct: 657 AIISACGHAGQVDEG--IHYFRCMTEELGIMARMEHYAC--MVDLFGRAGRLNEAFGMIN 712
Query: 532 EMT-DRNVITWTALISALGLNGFAQRA 557
M + W L+ A L+G + A
Sbjct: 713 SMPFSPDAGVWGTLLGACRLHGNVELA 739
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 150/597 (25%), Positives = 265/597 (44%), Gaps = 41/597 (6%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G Q A +L NG+ + +GT LLG+Y G + ++F + WN ++ F
Sbjct: 64 QGRQAHAQMLVNGI-GYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGF 122
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G + + + +++ + +F VI + G +H + GF+ ++
Sbjct: 123 TMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDV 182
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V +SL+ Y + I A +F + +D V WN ++ ++ ++ A +++ M
Sbjct: 183 FVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRT 242
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
PN TF V++ CA G +H V+ + LE D V + L+ YAKC +L A
Sbjct: 243 ETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDA 302
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----RS 351
F + ++V+WN +I GY + L E++ +P+ TFS L
Sbjct: 303 RRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEG 362
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ Q ++HC IIR G + + KS LI
Sbjct: 363 ATLRQGKEIHCYIIRNGVS---------LDVFLKSALID--------------------- 392
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
IY + K+ Q DIV +I+ NG LE+F+++ R+ ++
Sbjct: 393 --IYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANS 450
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
T S+L AC+ L L LG LHG I K S +V + ++DMY KCG + + + F
Sbjct: 451 VTLASVLPACAGLAALTLGKELHGHILKNGHGGS-CYVGSAIMDMYAKCGRLDLAHQTFI 509
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
++D++ + W ++I++ NG + A++ FR+M G K D V++ A L+AC + +
Sbjct: 510 GISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHY 569
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
G E+ M R ++ ++D+ + G+L A ++ TM N + W + +
Sbjct: 570 GKEIHAFMMRG-AFRSDLFAESALIDMYSKCGNLDLACRVFDTME-EKNEVSWNSII 624
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 145/518 (27%), Positives = 235/518 (45%), Gaps = 46/518 (8%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
V ++ ++ L G Q H ++ NG Y ++ L+ MY C A+ +F +
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
+ WN +I F AL Y +M P++ TF YVI +C GL + LG+
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-- 321
+H K+ E DVFVGS+L+ FY++ + A F + +K+ V WN ++ GY
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 322 -SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-----QLHCLIIRMGYENYEYV 375
+ T +F+ E+ + PN TF+ VL S A +++ QLH L++ G E V
Sbjct: 229 WDNATGVFM--EMRRTETNPNSVTFACVL-SVCASEIMINFGSQLHGLVVSSGLEMDSPV 285
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
+L+ YAK G + DA +L + + D
Sbjct: 286 ANTLLAMYAKCGHLFDAR--------------------------------RLFDMMPKTD 313
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
+V+WN +I+ NG E LF M +AR+ PD+ TF S L S+ L G +H
Sbjct: 314 LVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHC 373
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
I + +S D F+ + LID+Y KC + + KIF++ T +++ TA+IS LNG
Sbjct: 374 YIIRNG-VSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNN 432
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
ALE FR + + + V L +VL AC + G EL + ++ G +
Sbjct: 433 NALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKN-GHGGSCYVGSAI 491
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+D+ + G L A + + +A+ W + + C +
Sbjct: 492 MDMYAKCGRLDLAHQTFIGIS-DKDAVCWNSMITSCSQ 528
>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
Length = 867
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 196/665 (29%), Positives = 353/665 (53%), Gaps = 22/665 (3%)
Query: 7 VSFNSIISAYSRCGYVE-DALRMFLYMINRG-FEPTQFTFGGLLS--CDSLNPVEGAQLQ 62
V +N ++S YSR G + D +++F M + G P+ T +L S N G +
Sbjct: 104 VIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVH 163
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLD-EVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V+K+G F D F G AL+ +Y + G + + +VF+ + K +V+WN++++ ++G
Sbjct: 164 GYVIKSG-FEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGL 222
Query: 122 VEDCMFLFCELVRSEVA---LTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELL 177
+++ LF +++ V T ++ + V G QIH V++ ++
Sbjct: 223 LKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVS 282
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVD 236
V N+L++ Y + AE +F ++ RD+VSWNTII A + + K+L ++ + S++
Sbjct: 283 VCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLE 342
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLEG 295
++ + T V ++ +CA L N GK +HA ++++ L D G+ALV FYAKC +E
Sbjct: 343 MLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEE 402
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLA 354
A+ FS IS K+++SWN+++ + K + L+ +L+L RP+ T ++ +
Sbjct: 403 AYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCAS 462
Query: 355 F----QLLQLHCLIIRMGY---ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
++ ++H IR G V +++ +Y+K G I A L+ R +V
Sbjct: 463 LLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVT 522
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
N + Y G + + + S + D+ +WN+++ A N ++ LELF ++ +
Sbjct: 523 CNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGM 582
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD T +SL+ C+++ ++ L HG I ++ D + L+D Y KCG IG +
Sbjct: 583 KPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSF--EDLHLKGTLLDAYAKCGIIGYAY 640
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
KIF D++++ +TA+I ++G +++ALE F M +G KPD V ++L+AC H G
Sbjct: 641 KIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAG 700
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
+ EG+++F+ + + +G++P ++ + CVVDLL R GH+ EA +T +P NA IW T
Sbjct: 701 RIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEANANIWGTL 760
Query: 648 LEGCQ 652
L C+
Sbjct: 761 LGACK 765
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 161/633 (25%), Positives = 272/633 (42%), Gaps = 94/633 (14%)
Query: 24 DALRMFLYMI--NRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAFVGT 79
+AL F + + + F+P +L SC +L G L + V+K G
Sbjct: 18 EALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHSYVVKQGHVSCHV-TSK 76
Query: 80 ALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE-DCMFLFCELVRS-EV 137
ALL +Y + G LD+ +F+ R V WN ++S + + G + D M +F + S EV
Sbjct: 77 ALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEV 136
Query: 138 ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW-SAE 196
+ + V+ + +L G+ +HG VIK+GF+ + N+LV+MY +C + A
Sbjct: 137 MPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAY 196
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
+F + +DVVSWN +I LAE+ +A L+ M V PN T ++ CA
Sbjct: 197 AVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFD 256
Query: 257 NSIL---GKSIHAKVIK-NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
+I G+ IH+ V++ L DV V +AL+ FY K + A F + +++VSWN
Sbjct: 257 ENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWN 316
Query: 313 ALILGYASKS---SPTSIF---LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIR 366
+I GYA +F + +E+L L + T +L + LQ
Sbjct: 317 TIIAGYALNGEWLKSLHVFGNLVSLEMLLL----DSVTMVSILPACAQLDNLQ------- 365
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
G + + Y+L L D A N + Y + G E
Sbjct: 366 AGKQVHAYIL-------RHPFLFEDTSA-------------GNALVSFYAKCGYIEEAYH 405
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
S + R D++SWN ++ A + L L M I PD+ T ++++ C+ L
Sbjct: 406 TFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLR 465
Query: 487 LALGSSLHGL-IKKTEII-SSDTFVCNMLIDMYGKCGSIGSSVK---------------- 528
+ +HG I+ ++ ++ V N ++D Y KCG+I + K
Sbjct: 466 VKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNS 525
Query: 529 ----------------IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
IF+ M++ ++ TW ++ N ++ALE F +++ G KPD
Sbjct: 526 LISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPD 585
Query: 573 RVALIAVLTACR-----------HGGLVREGME 594
V +++++ C HG ++R E
Sbjct: 586 VVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFE 618
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 197/458 (43%), Gaps = 49/458 (10%)
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVF--PNQTTFVYVINSCAGLQNSILGKSIH 265
++W + I +L +AL + D P+ ++ SC+ L S LGK +H
Sbjct: 1 MTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLH 60
Query: 266 AKVIKNA-LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSS 323
+ V+K + C V AL++ YAKC L+ H F + + V WN ++ GY+ S +
Sbjct: 61 SYVVKQGHVSCHV-TSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKN 119
Query: 324 PTSIFLLIELLQLG--YRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLG 377
+ + + P+ T + VL RS +H +I+ G+E +
Sbjct: 120 DADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGN 179
Query: 378 SLMTSYAKSGLIS-DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
+L++ YAK GL++ DA A + + D+
Sbjct: 180 ALVSMYAKCGLVACDAYA--------------------------------VFDSIIHKDV 207
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC-NLA--LGSSL 493
VSWN +IA A NG KE LF M + P+ T ++L C+ N+A G +
Sbjct: 208 VSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQI 267
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H + + +S+D VCN L+ Y K G + +F M R++++W +I+ LNG
Sbjct: 268 HSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGE 327
Query: 554 AQRALEKFREMEFLG-FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY 612
++L F + L D V ++++L AC ++ G ++ + R + +
Sbjct: 328 WLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAG 387
Query: 613 HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ +V + G+++EA +M + + W + L+
Sbjct: 388 NALVSFYAKCGYIEEAYHTF-SMISRKDLISWNSILDA 424
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 187/607 (30%), Positives = 306/607 (50%), Gaps = 33/607 (5%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L C SL E + + KNGL+ F T L+ L+ R+G +DE VFE + +K
Sbjct: 44 LERCSSLK--ELRHILPLIFKNGLYQEHLF-QTKLVSLFCRYGSVDEAARVFEPIDKKLN 100
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
V + +++ F K ++ + F + EV +F ++ +E +L G++IHGL
Sbjct: 101 VLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
++K+GF +L L NMY +C + A K+F + RD+VSWNTI+ +++ A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
LE+ M + + P+ T V V+ + + L+ +GK IH ++ + V + +ALVD
Sbjct: 221 LEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDM 280
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTF 345
YAKC +L+ A L F + +N+VSWN++I Y +P ++ + +L G +P + +
Sbjct: 281 YAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSV 340
Query: 346 SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
L + L+ I ++ E L + R V
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVE----------------------------LELDRNV 372
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
N + +Y + + + + +L+ IVSWN +I A NG E L F M+A
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQAR 432
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ PD +T+VS+++A ++L +HG++ + + + FV L+DMY KCG+I
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRN-CLDKNVFVTTALVDMYAKCGAIMI 491
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ IF+ M++R+V TW A+I G +G + ALE F EM+ +P+ V ++V++AC H
Sbjct: 492 ARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSH 551
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GLV G++ F M +Y +EP MDHY +VDLL R G L EA I MP P ++
Sbjct: 552 SGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYG 611
Query: 646 TFLEGCQ 652
L CQ
Sbjct: 612 AMLGACQ 618
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 220/413 (53%), Gaps = 9/413 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+R++VS+N+I++ YS+ G AL M M +P+ T +L + +L + G
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIG 255
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ ++ G F + + TAL+ +Y + G L +F+ M +++V+WNS++ + +
Sbjct: 256 KEIHGYAMRAG-FDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQ 314
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ ++ M +F +++ V T+ S +G +H ++ DLE G IH L ++ D + V
Sbjct: 315 NENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSV 374
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY +C + +A MF ++ R +VSWN +I A++ +AL + +M V
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTV 434
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T+V VI + A L + K IH V++N L+ +VFV +ALVD YAKC + A L
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQL 357
F +S +++ +WNA+I GY + + L E +Q G RPN TF V+ + L
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGL 554
Query: 358 LQLHCLIIRMGYENYEYV-----LGSLMTSYAKSGLISDALAFVTALNIPRAV 405
++ M ENY G+++ ++G +++A F+ + + AV
Sbjct: 555 VEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 184/665 (27%), Positives = 342/665 (51%), Gaps = 54/665 (8%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR---GFEPTQFTFGGLLSCDSLNPVE- 57
P R+VVS+NS++S + + G ++ +FL M GF+ T F L +C L
Sbjct: 136 PKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVV-LKACSVLEDGGL 194
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ +++ G F D G+ALL +Y + LD+ + +F ++P K+ V W++I++
Sbjct: 195 GIQVHGLIVRMG-FYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIA--- 250
Query: 118 KHGFVED-----CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
G V++ + LF E+ + + +++S + V + L+ G Q+H +K F
Sbjct: 251 --GCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDF 308
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
++ V + ++MY +C + A+++F + + +N II +E +AL+ +
Sbjct: 309 GSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQL 368
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ + N+ + ++CA ++ + G+ +H+ +K+ L ++ V ++++D Y KC+
Sbjct: 369 LLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEA 428
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
L A F E+ ++ VSWNA+I + + ++ L +L+L P++FT+ VL++
Sbjct: 429 LSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKA 488
Query: 352 SLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ Q L ++H II+ G +V G+L+ Y K G+I +A
Sbjct: 489 CSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEA--------------- 533
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
K+ ++E+ +VSWN +IA ++ F M +
Sbjct: 534 -----------------KKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSV 576
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PDN+T+ +L AC+ L ++ LG +HG I K E+ SD ++ + L+DMY KCG++ S
Sbjct: 577 KPDNFTYAIVLDACANLASVGLGKQIHGQIIKLEL-HSDVYITSTLVDMYSKCGNMQDSA 635
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+F + +++ +TW A+I +G + AL F M+ +P+ +++L AC H G
Sbjct: 636 LVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMG 695
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
+ +G+ F M YG+EP+++HY C++D++ R G + EA K+I MPF +A+IWRT
Sbjct: 696 FIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTL 755
Query: 648 LEGCQ 652
L C+
Sbjct: 756 LSICK 760
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 175/652 (26%), Positives = 308/652 (47%), Gaps = 76/652 (11%)
Query: 39 PTQF-TFGGLLS-CDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVV 95
PT+ TF ++ C N ++ G Q A ++ +G F D ++ L+ +Y R L+
Sbjct: 40 PTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSG-FIPDVYISNCLMKMYLRCSHLNYAY 98
Query: 96 SVFE-------------------------------DMPRKSLVTWNSIVSIFGKHGFVED 124
VFE D P++ +V+WNS++S F ++G
Sbjct: 99 KVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRK 158
Query: 125 CMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ +F ++ RS EV +++F V+ S +D G Q+HGL+++ GF +++ ++L+
Sbjct: 159 SIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALL 218
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
+MY +C + + K+F ++ +++ V W+ II +++ LEL+ M + +Q+
Sbjct: 219 DMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQS 278
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
+ V SCAGL +G +HA +K D+ VG+A +D YAKC +L A F+ +
Sbjct: 279 IYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSL 338
Query: 304 SNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCL 363
++ +NA+I+G +R+ F+ LQ L
Sbjct: 339 PKHSLQCYNAIIVG------------------------------CVRNEKGFEALQFFQL 368
Query: 364 IIRMGYENYEYVLGSLMTSYA--KSGLISDALAFVTALNIPRA-VVPANIIAGIYNRTGQ 420
+++ G E L ++ A K L L ++ + R+ + AN I +Y +
Sbjct: 369 LLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEA 428
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+E + ++ER D VSWN VIAA NG+ +E L LF M R+ PD +T+ S+L A
Sbjct: 429 LSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKA 488
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
CS L G +H I K+ + D+FV LIDMY KCG I + KI + + + +++
Sbjct: 489 CSSQQALNSGMEIHNRIIKSG-LGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVS 547
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W A+I+ L ++ A F EM + KPD VL AC + V G ++ ++
Sbjct: 548 WNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQII 607
Query: 601 RSYGVEPEMDHY--HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ +E D Y +VD+ + G+++++ + P + + W + G
Sbjct: 608 K---LELHSDVYITSTLVDMYSKCGNMQDSALVFEKAP-NKDFVTWNAMICG 655
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 228/462 (49%), Gaps = 46/462 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLN-PVEG 58
+P ++ +N+II R +AL+ F ++ G + + G S C S+ ++G
Sbjct: 338 LPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDG 397
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL + +K+ L ++ V ++L +YG+ L E +F++M R+ V+WN++++ +
Sbjct: 398 RQLHSLSVKSTLR-SNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQ 456
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G E+ + LF ++R + + ++ V+ S++Q L G +IH +IK+G + V
Sbjct: 457 NGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFV 516
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA---LAESENFGKALELYLRMSV 235
+L++MY +C I A+K+ +E + +VSWN II L SE+ L+MSV
Sbjct: 517 GGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSV 576
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
P+ T+ V+++CA L + LGK IH ++IK L DV++ S LVD Y+KC N++
Sbjct: 577 K---PDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQD 633
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
+ L F + NK+ V+WNA+I GYA E +QL RPN TF +LR+
Sbjct: 634 SALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRAC-- 691
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NI 410
A G I L + A+ + P +
Sbjct: 692 -----------------------------AHMGFIDKGLHYFNAMLTEYGLEPQIEHYSC 722
Query: 411 IAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
+ I R+G+ +E +KL+ ++ D V W +++ C +G+
Sbjct: 723 MIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGN 764
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 141/548 (25%), Positives = 252/548 (45%), Gaps = 76/548 (13%)
Query: 126 MFLFCELV-----RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+F FC + ++++ +F +I S+ L+ G+Q H +I +GF ++ ++N
Sbjct: 23 IFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISN 82
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL--------- 231
L+ MY +C+ + A K+F+ + RDV+S+NT+I A++ A E +
Sbjct: 83 CLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVS 142
Query: 232 --------------RMSVDIVFP---------NQTTFVYVINSCAGLQNSILGKSIHAKV 268
R S+D+ +QTTF V+ +C+ L++ LG +H +
Sbjct: 143 WNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLI 202
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SI 327
++ DV GSAL+D YAKC L+ + FSEI KN V W+A+I G +
Sbjct: 203 VRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGL 262
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSY 383
L E+ ++G ++ ++ V RS L QLH ++ + + V + + Y
Sbjct: 263 ELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMY 322
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
AK G ++DA ++ + L + + +N +I
Sbjct: 323 AKCGSLADA--------------------------------QRIFNSLPKHSLQCYNAII 350
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
C N E L+ F+ + + + + + SAC+ + G LH L K+ +
Sbjct: 351 VGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKS-TL 409
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFRE 563
S+ V N ++DMYGKC ++ + +F+EM R+ ++W A+I+A NG + L F
Sbjct: 410 RSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFAS 469
Query: 564 MEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYG 623
M L +PD+ +VL AC + GME+ R+ +S G+ + ++D+ + G
Sbjct: 470 MLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKS-GLGLDSFVGGALIDMYCKCG 528
Query: 624 HLKEAEKI 631
++EA+KI
Sbjct: 529 MIEEAKKI 536
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 176/405 (43%), Gaps = 77/405 (19%)
Query: 223 FGKALELYLRMSVDIVFPNQT-------TFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+ K L ++ ++ + NQT TF ++I C+ + GK HA++I +
Sbjct: 17 YNKTLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIP 76
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA---------------- 319
DV++ + L+ Y +C +L A+ F ++S ++++S+N +I GYA
Sbjct: 77 DVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTP 136
Query: 320 -----SKSSPTSIFL--------LIELLQLGYRP----NEFTFSHVLRSSLAFQL----L 358
S +S S FL + L +G ++ TF+ VL++ + +
Sbjct: 137 KRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGI 196
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
Q+H LI+RMG+ +L+ YAK + D+L
Sbjct: 197 QVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSL------------------------- 231
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
K+ S++ + V W+ +IA C N ++ LELFK M+ I + S+
Sbjct: 232 -------KIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVF 284
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
+C+ L L +G+ LH K + SD V +DMY KCGS+ + +IFN + ++
Sbjct: 285 RSCAGLSALKVGTQLHAHALKCD-FGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSL 343
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ A+I N AL+ F+ + G + ++L +AC
Sbjct: 344 QCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSAC 388
>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
Length = 818
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 199/650 (30%), Positives = 335/650 (51%), Gaps = 45/650 (6%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQASVLK 67
+N +I ++ G + AL + M+ G P ++TF ++ +C LN V ++ ++
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174
Query: 68 NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMF 127
F D FVG++L+ Y +GC+ + +F+ MP K V WN +++ + K+G ++
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234
Query: 128 LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYF 187
+F E+ R+E +F V+ ++E + FG Q+HGLV+ +G + + VAN+L+ MY
Sbjct: 235 VFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYA 294
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF-- 245
+C ++ A ++F + D+V+WN +I ++ +A L+ M + P+ TF
Sbjct: 295 KCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSITFSS 354
Query: 246 -VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
+ +++ A L+ GK IH +I+N + DVF+ SAL+D Y KC ++E AH F + +
Sbjct: 355 FLPLLSEGATLRQ---GKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRT 411
Query: 305 NKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----Q 359
+IV A+I GY + + ++ + LLQ R N T + VL + L +
Sbjct: 412 PVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKE 471
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
LH I++ G+ YV ++M YAK G + LA T + I
Sbjct: 472 LHGHILKNGHGGSCYVGSAIMDMYAKCGKLD--LAHQTFIGI------------------ 511
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
D V WN +I +C+ NG +E ++LF+ M A D + + LS
Sbjct: 512 ------------SXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALS 559
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
AC+ L L G +H + + SD F + LIDMY KCG++ + ++F+ M ++N +
Sbjct: 560 ACANLPALHYGKEIHAFMMRGAF-RSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNEV 618
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W ++I+A G +G + +L F M G +PD V +A+++AC H G V EG+ F M
Sbjct: 619 SWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCM 678
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
G+ M+HY C+VDL R G L EA +I +MPF P+A +W +LE
Sbjct: 679 TEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGLYLE 728
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 146/544 (26%), Positives = 264/544 (48%), Gaps = 48/544 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP ++ V +N +++ Y + G ++A +F+ M P TF +LS C S + G
Sbjct: 208 MPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFG 267
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+QL V+ +GL D+ V LL +Y + G L + +F+ MP+ LVTWN ++S + +
Sbjct: 268 SQLHGLVVSSGLE-MDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQ 326
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF+++ LF E++ + + +F + LS L G++IH +I+NG ++ +
Sbjct: 327 NGFMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFL 386
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++L+++YF+C + A K+F D+V +I + ALE++ + + +
Sbjct: 387 KSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERM 446
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N T V+ +CAGL LGK +H ++KN +VGSA++D YAKC L+ AH
Sbjct: 447 RANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQ 506
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F IS K+ V WN++I + P +I L ++ G + + + S L +
Sbjct: 507 TFIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPA 566
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L ++H ++R + + +A+S LI
Sbjct: 567 LHYGKEIHAFMMRGAFRS---------DLFAESALID----------------------- 594
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y++ G + ++ +E + VSWN +IAA ++G K+ L LF M I PD+ T
Sbjct: 595 MYSKCGNLDLACRVFDMMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVT 654
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTE----IISSDTFVCNMLIDMYGKCGSIGSSVKI 529
F++++SAC + G +H TE + + + C ++D++G+ G + + +
Sbjct: 655 FLAIISACGHAGQVDEG--IHYFRCMTEELGIMARMEHYAC--MVDLFGRAGRLNEAFGM 710
Query: 530 FNEM 533
N M
Sbjct: 711 INSM 714
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 149/597 (24%), Positives = 263/597 (44%), Gaps = 41/597 (6%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G Q A +L NG+ + +GT LLG+Y G + ++F + WN ++ F
Sbjct: 64 HGRQAHAQMLVNGI-GYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGF 122
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G + + + +++ + +F VI + G +H + GF+ ++
Sbjct: 123 TMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDV 182
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V +SL+ Y + I A +F + +D V WN ++ ++ ++ A +++ M
Sbjct: 183 FVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRT 242
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
PN TF V++ CA G +H V+ + LE D V + L+ YAKC +L A
Sbjct: 243 ETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDA 302
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----RS 351
F + ++V+WN +I GY + L E++ G +P+ TFS L
Sbjct: 303 RRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSITFSSFLPLLSEG 362
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ Q ++HC IIR G + + KS LI
Sbjct: 363 ATLRQGKEIHCYIIRNGVS---------LDVFLKSALID--------------------- 392
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
IY + K+ Q DIV +I+ NG LE+F+++ R+ ++
Sbjct: 393 --IYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANS 450
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
T S+L AC+ L L LG LHG I K S +V + ++DMY KCG + + + F
Sbjct: 451 VTLASVLPACAGLAALTLGKELHGHILKNGHGGS-CYVGSAIMDMYAKCGKLDLAHQTFI 509
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
++ ++ + W ++I++ NG + A++ FR+M G K D V++ A L+AC + +
Sbjct: 510 GISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHY 569
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
G E+ M R ++ ++D+ + G+L A ++ M N + W + +
Sbjct: 570 GKEIHAFMMRG-AFRSDLFAESALIDMYSKCGNLDLACRVFDMME-EKNEVSWNSII 624
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 144/518 (27%), Positives = 234/518 (45%), Gaps = 46/518 (8%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
V ++ ++ L G Q H ++ NG Y ++ L+ MY C A+ +F +
Sbjct: 49 LVSILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
+ WN +I F AL Y +M P++ TF YVI +C GL + LG+
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-- 321
+H K+ E DVFVGS+L+ FY++ + A F + +K+ V WN ++ GY
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 322 -SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-----QLHCLIIRMGYENYEYV 375
+ T +F+ E+ + PN TF+ VL S A +++ QLH L++ G E V
Sbjct: 229 WDNATGVFM--EMRRTETNPNSVTFACVL-SVCASEIMINFGSQLHGLVVSSGLEMDSPV 285
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
+L+ YAK G + DA +L + + D
Sbjct: 286 ANTLLAMYAKCGHLFDAR--------------------------------RLFDMMPKTD 313
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
+V+WN +I+ NG E LF M +A + PD+ TF S L S+ L G +H
Sbjct: 314 LVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGATLRQGKEIHC 373
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
I + +S D F+ + LID+Y KC + + KIF++ T +++ TA+IS LNG
Sbjct: 374 YIIRNG-VSLDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNN 432
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
ALE FR + + + V L +VL AC + G EL + ++ G +
Sbjct: 433 NALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKN-GHGGSCYVGSAI 491
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+D+ + G L A + + +A+ W + + C +
Sbjct: 492 MDMYAKCGKLDLAHQTFIGISX-KDAVCWNSMITSCSQ 528
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 26/172 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
M ++N VS+NSII+AY G ++D+L +F M+ G +P TF ++S C V EG
Sbjct: 612 MEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEG 671
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-------------- 104
+ + A ++ L+GR G L+E + MP
Sbjct: 672 IHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGLYLELVD 731
Query: 105 -----SLVTWNSIVSIFGKHGFVEDCMFLF----CELVRSEVALTESSFVGV 147
SL W+ + + H + D M+ + V S+++ TE SF+G
Sbjct: 732 FMEMLSLQKWHQEIYLIWIHK-IPDIMYYYQIQKSPTVFSDLSFTEESFLGA 782
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 195/659 (29%), Positives = 330/659 (50%), Gaps = 41/659 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
+ R+ VS+ +++S Y++ G ++A R++ M PT + +LS + + +G
Sbjct: 104 LSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQG 163
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A V K FC++ FVG AL+ LY G VF DM VT+N+++S +
Sbjct: 164 RMIHAQVYKQA-FCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQ 222
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E + +F E+ S + + ++ ++ DL+ G+Q+H ++K G ++ +
Sbjct: 223 CGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYIT 282
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SL+++Y +C I +A +F + +VV WN ++ A + + K+ E++ +M +
Sbjct: 283 EGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGI 342
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+ T+ ++ +C LG+ IH+ IKN E D++V L+D Y+K L+ A
Sbjct: 343 HPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARK 402
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF-- 355
+ +++VSW ++I GY ++ E+ G P+ + +
Sbjct: 403 ILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKA 462
Query: 356 --QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q LQ+H + YV SG +D + T +N+
Sbjct: 463 MRQGLQIHARV---------YV----------SGYAADISIWNTLVNL------------ 491
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
Y R G+ E L +++ D ++WN +I+ + Y++ L +F M A + +T
Sbjct: 492 -YARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFT 550
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F+S +SA + L ++ G +HG KT +S+T V N LI +YGKCGSI + IF+EM
Sbjct: 551 FISAISALANLADIKQGKQVHGRAVKTGH-TSETEVANALISLYGKCGSIEDAKMIFSEM 609
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+ RN ++W +I++ +G AL+ F +M+ G KP+ V I VL AC H GLV EG+
Sbjct: 610 SLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGL 669
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+ M+ YG+ P DHY CVVD+L R G L A + + MP NA+IWRT L C+
Sbjct: 670 SYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACK 728
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/599 (25%), Positives = 285/599 (47%), Gaps = 41/599 (6%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ A+ + GL AD +G L+ LY ++G + + VF+++ + V+W +++S + +
Sbjct: 64 EIHATSVVRGL-GADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQR 122
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ++ L+ ++ + V T V+ + + G IH V K F E V
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L+ +Y AE++F D+ D V++NT+I A+ + AL+++ M + +
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ T ++ +CA + + GK +H+ ++K + D +L+D Y KC ++E AH
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLL 358
F+ N+V WN +++ Y S F + +Q G PN+FT+ +LR+ +
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQI 362
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q+H L I+ G+E+ YV G L+ Y+K + A
Sbjct: 363 ELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKAR--------------------- 401
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
K+L LE+ D+VSW +IA + +E L FK M+ ++PDN
Sbjct: 402 -----------KILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGL 450
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S SAC+ + + G +H + + ++D + N L+++Y +CG + +F E+
Sbjct: 451 ASAASACAGIKAMRQGLQIHARVYVSGY-AADISIWNTLVNLYARCGRSEEAFSLFREID 509
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
++ ITW LIS G + ++AL F +M G K + I+ ++A + +++G +
Sbjct: 510 HKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQ 569
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ R ++ G E + + ++ L + G +++A+ I + M N + W T + C +
Sbjct: 570 VHGRAVKT-GHTSETEVANALISLYGKCGSIEDAKMIFSEMSL-RNEVSWNTIITSCSQ 626
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 238/501 (47%), Gaps = 42/501 (8%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
+IH + G + L+ N L+++Y + +W A ++FK++ RD VSW ++ A+
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
+A LY +M V P V+++C + G+ IHA+V K A + FVG+
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRP 340
AL+ Y + + A F ++ + V++N LI G+A + + +QL G RP
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 341 NEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVL-GSLMTSYAKSGLISDALAF 395
+ T + +L + + LQ LH +++ G +++Y+ GSL+ Y K G I A
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGM-SFDYITEGSLLDLYVKCGDIETA--- 299
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
I+N +R ++V WN+++ A D +
Sbjct: 300 ----------------HDIFNLG-------------DRTNVVLWNLMLVAYGQISDLAKS 330
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
E+F M+A I+P+ +T+ +L C+ + LG +H L K SD +V +LID
Sbjct: 331 FEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGF-ESDMYVSGVLID 389
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY K + + KI + R+V++WT++I+ + F + AL F+EM+ G PD +
Sbjct: 390 MYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIG 449
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
L + +AC +R+G+++ R+ S G ++ ++ +V+L R G +EA + +
Sbjct: 450 LASAASACAGIKAMRQGLQIHARVYVS-GYAADISIWNTLVNLYARCGRSEEAFSLFREI 508
Query: 636 PFPPNALIWRTFLEGCQRCRI 656
+ + W + G + R+
Sbjct: 509 DH-KDEITWNGLISGFGQSRL 528
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 129/292 (44%), Gaps = 35/292 (11%)
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
+L++H + G + L+ YAK+GL+ A
Sbjct: 62 VLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQAR----------------------- 98
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
++ +L D VSW +++ A G KE L+ M + P Y S
Sbjct: 99 ---------QVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSS 149
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+LSAC+K A G +H + K + S+TFV N LI +Y GS + ++F +M
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYK-QAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFC 208
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+ +T+ LIS G + AL+ F EM+ G +PD V + ++L AC G +++G +L
Sbjct: 209 DRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLH 268
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ ++ G+ + ++DL V+ G ++ A I + N ++W L
Sbjct: 269 SYLLKA-GMSFDYITEGSLLDLYVKCGDIETAHDIF-NLGDRTNVVLWNLML 318
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 194/661 (29%), Positives = 338/661 (51%), Gaps = 28/661 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+VVS+NS++S Y + G ++ +F+ M G E TF +L C L G
Sbjct: 98 MPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLG 157
Query: 59 AQLQASVLKNGLFC-ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ V++ G C D +ALL +Y + E + VF+ +P K+ V+W++I++
Sbjct: 158 MQIHGVVVRVG--CDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCV 215
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ + + F E+ + +++S + V+ + +L G Q+H +K+ F + +
Sbjct: 216 QNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI 275
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V + ++MY +C + A+ +F E + S+N +I ++ E+ KAL L+ R+
Sbjct: 276 VRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSG 335
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ ++ + V +CA ++ G I+ IK++L DV V +A +D Y KC L A
Sbjct: 336 LGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 395
Query: 298 LCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F E+ ++ VSWNA+I + ++FL + +L+ P+EFTF VL++
Sbjct: 396 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTGGS 455
Query: 357 L---LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L +++H I++ G + V SL+ Y+K G+I +A I +
Sbjct: 456 LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA---------------EKIHSR 500
Query: 414 IYNRT---GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ RT G E K+ ++ + VSWN +I+ ++ LF M I PD
Sbjct: 501 FFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPD 560
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+T+ ++L C+ L + LG +H + K E+ SD ++ + L+DMY KCG + S +F
Sbjct: 561 KFTYATVLDTCANLASAGLGKQIHAQVIKKEL-QSDVYISSTLVDMYSKCGDLHDSRLMF 619
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ R+ +TW A+I +G + A++ F M KP+ V I++L AC H GL+
Sbjct: 620 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID 679
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+G+E F M R YG++P++ HY +VD+L + G +K A ++I MPF + +IWRT L
Sbjct: 680 KGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGV 739
Query: 651 C 651
C
Sbjct: 740 C 740
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 162/590 (27%), Positives = 275/590 (46%), Gaps = 58/590 (9%)
Query: 17 SRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNGLFCAD 74
++ G +E + +MI GF PT F LL +S + V AS++ + + D
Sbjct: 17 AKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFV-----SASMVFDRMPLRD 71
Query: 75 AFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR 134
++ Y + + + F MP + +V+WNS++S + ++G + +F ++ R
Sbjct: 72 VVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGR 131
Query: 135 SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
+ +F ++ S +D G QIHG+V++ G D +++ A++L++MY +
Sbjct: 132 AGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVE 191
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
+ ++F+ + ++ VSW+ II ++ AL+ + M +Q+ + V+ SCA
Sbjct: 192 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 251
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
L LG +HA +K+ D V +A +D YAKCDN++ A + F + N N S+NA+
Sbjct: 252 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAM 311
Query: 315 ILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE 373
I GY+ + LL L+ G +E + S V R+ C +++ E
Sbjct: 312 ITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA----------CALVKGLSE--- 358
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
GL LA ++L++ V AN +Y + E ++ ++ R
Sbjct: 359 -------------GLQIYDLAIKSSLSLD--VCVANAAIDMYGKCQALAEAFRVFDEMRR 403
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
D VSWN +IAA NG E L LF M +RI PD +TF S+L AC+ +L G +
Sbjct: 404 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEI 462
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NV-------------- 538
H I K+ + S+ + C+ LIDMY KCG I + KI + R NV
Sbjct: 463 HSSIVKSGMASNSSVGCS-LIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKR 521
Query: 539 -----ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
++W ++IS + ++ A F M +G PD+ VL C
Sbjct: 522 LQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC 571
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 202/679 (29%), Positives = 348/679 (51%), Gaps = 59/679 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYM----INRGFEPTQFTFGGLLS--CDSLNP-- 55
RN+VS NS+IS Y + G A +F M + G +P ++TFG L+S C N
Sbjct: 241 RNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGL 300
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
V QL V K+G F D +VG+AL+ + + G + ++F+ M +++V+ N ++
Sbjct: 301 VLLEQLLTRVEKSG-FLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIG 359
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGE----QIHGLVIKNG 171
+ E+ + LF E+ + V L +S++ ++ LE G+ ++H +I++G
Sbjct: 360 LVRQKRGEEAVELFMEM-KDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSG 418
Query: 172 F-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
+ ++ + N L+NMY +C I A +F+ ++ +D V+WN++I L +++ F +A++ +
Sbjct: 419 LLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTF 478
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
M ++P+ T + ++SCA L +G+ +H + +K L+ DV V +AL+ Y +C
Sbjct: 479 QEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGEC 538
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT---SIFLLIELLQLGYRPNEFTFSH 347
++ FS + + + VSWN+LI G + S P+ ++ + +++ G+ PN TF
Sbjct: 539 GYVKECQKAFSLMLDYDHVSWNSLI-GALADSEPSMLEAVESFLVMMRAGWDPNRVTFIT 597
Query: 348 VLR--SSLAFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
+L SSL+ L Q+H L+++ N+
Sbjct: 598 ILAAVSSLSLHELGKQIHALVLKR--------------------------------NVAA 625
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
N + Y + G + S++ +R D VSWN +I+ HN + +++ +M
Sbjct: 626 DTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFM 685
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
D +TF ++LSAC+ + L G +HG + + SD + + L+DMY KCG
Sbjct: 686 MQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRA-CLESDIVIGSALVDMYAKCGR 744
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
I + + F M RN+ +W ++IS +G ++L+ F +M+ G PD V + VL+A
Sbjct: 745 IDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSA 804
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H GLV EG F+ M+ YG+ P M+H+ C+VDLL R G L + E + MP PN L
Sbjct: 805 CSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVL 864
Query: 643 IWRTFLEGCQRCRIAKYDT 661
IWRT L C CR +T
Sbjct: 865 IWRTVLGAC--CRANGRNT 881
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 163/618 (26%), Positives = 294/618 (47%), Gaps = 64/618 (10%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ +L + KNG F D F+ L+ +Y R G L VF++MP ++LV+W+ ++S +
Sbjct: 91 DAEELHLQLFKNG-FVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGY 149
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN--EQDLEFGEQIHGLVIKNGFDY 174
++ + LF ++V +F VI E L+FG QIHGL+ K +
Sbjct: 150 TRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVN 209
Query: 175 ELLVANSLVNMYFQCAGIWS-AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
++ +N L++MY G+ A + F + R++VS N++I + + A +++ M
Sbjct: 210 DVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTM 269
Query: 234 SVDIV----FPNQTTFVYVINSCAGLQNS--ILGKSIHAKVIKNALECDVFVGSALVDFY 287
+++ PN+ TF +I++ L NS +L + + +V K+ D++VGSALV +
Sbjct: 270 QKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGF 329
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQ-LGYRPNEFTF 345
AK ++ A F ++S +N+VS N LI+G K ++ L +E+ + PN +
Sbjct: 330 AKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMI 389
Query: 346 SHVLRSSLAFQLLQ--------LHCLIIRMGYENYEYVLGS-LMTSYAKSGLISDALAFV 396
+L + F +L+ +H +IR G N + +G+ L+ YAK G I+DA
Sbjct: 390 --ILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACV-- 445
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
+ ++ D V+WN +I N + E +
Sbjct: 446 ------------------------------VFRLMDNKDSVTWNSMITGLDQNKQFLEAV 475
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH--GLIKKTEIISSDTFVCNMLI 514
+ F+ MR +YP N+T +S LS+C+ L +++G LH GL ++ D V N L+
Sbjct: 476 KTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDL---DVSVSNALL 532
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ-RALEKFREMEFLGFKPDR 573
+YG+CG + K F+ M D + ++W +LI AL + + A+E F M G+ P+R
Sbjct: 533 ALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNR 592
Query: 574 VALIAVLTACRHGGLVREGMELFER-MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII 632
V I +L A L G ++ + R+ + ++ + ++ + G + E I
Sbjct: 593 VTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIE--NALLACYGKCGDMGYCENIF 650
Query: 633 TTMPFPPNALIWRTFLEG 650
+ M + + W + + G
Sbjct: 651 SRMSDRQDEVSWNSMISG 668
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 176/677 (25%), Positives = 313/677 (46%), Gaps = 62/677 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL----SCDSLNPV 56
MP RN+VS++ +IS Y+R +A +F M++ GF P + FG ++ C
Sbjct: 134 MPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLK 193
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRH-GCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G Q+ ++ + D L+ +YG G +D F+ + ++LV+ NS++S+
Sbjct: 194 FGMQIHG-LMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISV 252
Query: 116 FGKHGFVEDCMFLFCELVRSEVA-------LTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
+ + G +F + + + T S + L+N L EQ+ V
Sbjct: 253 YCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLAN-SGLVLLEQLLTRVE 311
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
K+GF ++L V ++LV+ + + I A+ +F+ + R+VVS N +I L + +A+E
Sbjct: 312 KSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVE 371
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAG---LQNSIL-GKSIHAKVIKNA-LECDVFVGSAL 283
L++ M D V N +++ ++ + L+N G +HA +I++ L + +G+ L
Sbjct: 372 LFMEMK-DSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGL 430
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNE 342
++ YAKC + A + F + NK+ V+WN++I G +K ++ E+ + P+
Sbjct: 431 INMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSN 490
Query: 343 FTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
FT L S + + QLHC +++G
Sbjct: 491 FTMISALSSCASLGWISVGEQLHCEGLKLG------------------------------ 520
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN-GDYKEVLE 457
L++ +V +N + +Y G E K S + D VSWN +I A A + E +E
Sbjct: 521 LDLDVSV--SNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVE 578
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
F M A P+ TF+++L+A S L LG +H L+ K +++DT + N L+ Y
Sbjct: 579 SFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRN-VAADTAIENALLACY 637
Query: 518 GKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
GKCG +G IF+ M+DR + ++W ++IS N +A++ M G + D
Sbjct: 638 GKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTF 697
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
VL+AC + GME+ R+ +E ++ +VD+ + G + A + MP
Sbjct: 698 ATVLSACATVATLERGMEVHGCSVRAC-LESDIVIGSALVDMYAKCGRIDYASRFFEMMP 756
Query: 637 FPPNALIWRTFLEGCQR 653
N W + + G R
Sbjct: 757 -ARNLYSWNSMISGYAR 772
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 165/591 (27%), Positives = 286/591 (48%), Gaps = 66/591 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLLSCDSLNPVE-- 57
M RNVVS N +I R E+A+ +F+ M + P + L + + +E
Sbjct: 345 MSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMII-LTAFPEFHVLENG 403
Query: 58 ---GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
G+++ A ++++GL A +G L+ +Y + G +++ VF M K VTWNS+++
Sbjct: 404 KRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMIT 463
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
++ + + F E+ R+E+ + + + + ++ + GEQ+H +K G D
Sbjct: 464 GLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDL 523
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE-NFGKALELYLRM 233
++ V+N+L+ +Y +C + +K F + D VSWN++IGALA+SE + +A+E +L M
Sbjct: 524 DVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVM 583
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
PN+ TF+ ++ + + L LGK IHA V+K + D + +AL+ Y KC ++
Sbjct: 584 MRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDM 643
Query: 294 EGAHLCFSEISNK-NIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
FS +S++ + VSWN++I GY P ++ ++ ++Q G R + FTF+ VL +
Sbjct: 644 GYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSA 703
Query: 352 SLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
L ++H +R E+ + +L+ YAK G I A F ++P
Sbjct: 704 CATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFE-------MMP 756
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
A ++ SWN +I+ A +G + L+LF M+
Sbjct: 757 AR-------------------------NLYSWNSMISGYARHGHGTKSLDLFAQMKLQGP 791
Query: 468 YPDNYTFVSLLSACSK--LCNLALG-----SSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
PD+ TFV +LSACS L N S ++GL + E F C ++D+ G+
Sbjct: 792 LPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRME-----HFSC--MVDLLGRV 844
Query: 521 GSIGSSVKIFNEMTDR-NVITWTALISAL----GLN-GFAQRALEKFREME 565
G + N+M + NV+ W ++ A G N +RA E EME
Sbjct: 845 GELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEME 895
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 192/610 (31%), Positives = 311/610 (50%), Gaps = 45/610 (7%)
Query: 50 CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
C SL + Q+ ++KNG + F T L+ L+ + + E VFE + K V +
Sbjct: 54 CTSLKELH--QILPLIIKNGFYNEHLF-QTKLISLFCKFNSITEAARVFEPVEHKLDVLY 110
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
++++ + K+ + D + + + EV F ++ DL G +IHG+VI
Sbjct: 111 HTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVIT 170
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
NGF L ++VN+Y +C I A KMF+ + RD+VSWNT++ A++ +A+++
Sbjct: 171 NGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQV 230
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
L+M P+ T V V+ + A L+ +G+SIH + E V V +A++D Y K
Sbjct: 231 VLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFK 290
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHV 348
C ++ A L F +S++N+VSWN +I GYA F +++L G P +
Sbjct: 291 CGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGA 350
Query: 349 LRSSLAFQLLQ----LHCLI--IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
L + L+ +H L+ ++G++ V+ SL++ Y+K
Sbjct: 351 LHACANLGDLERGRYVHRLLDEKKIGFD--VSVMNSLISMYSKC---------------K 393
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
R + A++ + ++T +V+WN +I A NG E L LF M
Sbjct: 394 RVDIAASVFGNLKHKT-----------------VVTWNAMILGYAQNGCVNEALNLFCEM 436
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
++ I PD++T VS+++A + L +HGL +T ++ + FVC LID + KCG+
Sbjct: 437 QSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRT-LMDKNVFVCTALIDTHAKCGA 495
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
I ++ K+F+ M +R+VITW A+I G NG + AL+ F EM+ KP+ + ++V+ A
Sbjct: 496 IQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAA 555
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H GLV EGM FE M +YG+EP MDHY +VDLL R G L +A K I MP P
Sbjct: 556 CSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGIT 615
Query: 643 IWRTFLEGCQ 652
+ L C+
Sbjct: 616 VLGAMLGACR 625
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 137/541 (25%), Positives = 266/541 (49%), Gaps = 40/541 (7%)
Query: 7 VSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL--SCDSLNPVEGAQLQAS 64
V +++++ Y++ + DA+R + M P + F LL S ++L+ G ++
Sbjct: 108 VLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGM 167
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
V+ NG F ++ F TA++ LY + +++ +FE MP++ LV+WN++V+ + ++GF
Sbjct: 168 VITNG-FQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARR 226
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ + ++ + + V V+ +++ + L G IHG + GF+Y + VA ++++
Sbjct: 227 AVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLD 286
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
YF+C + SA +FK + R+VVSWNT+I A++ +A +L+M + V P +
Sbjct: 287 TYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVS 346
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
+ +++CA L + G+ +H + + + DV V ++L+ Y+KC ++ A F +
Sbjct: 347 MMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLK 406
Query: 305 NKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS----SLAFQLLQ 359
+K +V+WNA+ILGYA ++ L E+ +P+ FT V+ + S+ Q
Sbjct: 407 HKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKW 466
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+H L IR + +V +L+ ++AK G I A
Sbjct: 467 IHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTAR-------------------------- 500
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
KL ++ +++WN +I NG +E L+LF M+ + P+ TF+S+++
Sbjct: 501 ------KLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIA 554
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
ACS + G +K+ + ++D+ G+ G + + K +M + I
Sbjct: 555 ACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGI 614
Query: 540 T 540
T
Sbjct: 615 T 615
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 228/455 (50%), Gaps = 13/455 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP R++VS+N++++ Y++ G+ A+++ L M G +P T +L + L + G
Sbjct: 203 MPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIG 262
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + G F V TA+L Y + G + VF+ M +++V+WN+++ + +
Sbjct: 263 RSIHGYAFRAG-FEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQ 321
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G E+ F +++ V T S +G +H +N DLE G +H L+ + +++ V
Sbjct: 322 NGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSV 381
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY +C + A +F +++ + VV+WN +I A++ +AL L+ M +
Sbjct: 382 MNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDI 441
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T V VI + A L + K IH I+ ++ +VFV +AL+D +AKC ++ A
Sbjct: 442 KPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARK 501
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQL 357
F + +++++WNA+I GY + L +Q G +PNE TF V+ + L
Sbjct: 502 LFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGL 561
Query: 358 LQLHCLIIRMGYENY--EYVL---GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
++ ENY E + G+++ ++G + DA F+ + + + +
Sbjct: 562 VEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAML 621
Query: 413 G---IYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
G I+ +T L L+ PD +++++A
Sbjct: 622 GACRIHKNVELGEKTADELFDLD-PDDGGYHVLLA 655
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 122/271 (45%), Gaps = 16/271 (5%)
Query: 393 LAFVTALNIPRAVVPANIIAGIYN-------------RTGQYNETVKLLSQLERPDIVSW 439
L T+L ++P I G YN + E ++ +E V +
Sbjct: 51 LELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLY 110
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+ ++ A N ++ + ++ MR + P Y F LL + +L G +HG++
Sbjct: 111 HTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVI- 169
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
T S+ F ++++Y KC I + K+F M R++++W +++ NGFA+RA++
Sbjct: 170 TNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQ 229
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
+M+ G KPD + L++VL A +R G + R+ G E ++ ++D
Sbjct: 230 VVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRA-GFEYMVNVATAMLDTY 288
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ G ++ A + M N + W T ++G
Sbjct: 289 FKCGSVRSARLVFKGMS-SRNVVSWNTMIDG 318
>gi|242057857|ref|XP_002458074.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
gi|241930049|gb|EES03194.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
Length = 963
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 202/673 (30%), Positives = 338/673 (50%), Gaps = 88/673 (13%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG----FEPTQFTFGGLLSCDSLNPVE 57
P R+++++N+++S Y++ G V +F+ M PT+ TFG L++ SL+
Sbjct: 230 PIRDLITWNALMSVYAKKGDVVSTFTLFMDMQREDSRIQLRPTEHTFGSLITATSLSSGS 289
Query: 58 GA---QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
A Q+ SVLK+G +D +VG+AL+ + RHG +DE +F + K+ VT N ++
Sbjct: 290 SAVLDQVFVSVLKSGC-SSDLYVGSALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIV 348
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN----EQDLEFGEQIHGLVIKN 170
K E+ + +F R+ + + ++V ++ ++ E+ L G++ HG +++
Sbjct: 349 GLVKQHCSEEAVKIFVG-TRNTIVVNADTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRT 407
Query: 171 GF-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
G D ++ V+N LVNMY +C I SA K+F+ +E D +SWNTII AL ++
Sbjct: 408 GLTDLKIAVSNGLVNMYAKCGAIDSASKIFQLMEATDRISWNTIISALDQN--------- 458
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
GL+ G+ +H +K L+ D V + LV Y +
Sbjct: 459 ------------------------GLKLLSAGQQVHCDAVKWGLDLDTSVSNVLVKMYGE 494
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS--IFLLIELLQLGYRPNEFTFSH 347
C + F+ +++ + VSWN+++ AS +P S + + +++ G PN+ TF +
Sbjct: 495 CGAMSDCWKVFNSMADHDEVSWNSMMGVMASSQAPISETVEVFNNMMRGGLIPNKVTFVN 554
Query: 348 VLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
+L + +L+L H +++ G + V +L++ YAKSG
Sbjct: 555 LLAALSPLSVLELGKQFHAAVLKHGVMDDNVVDNALISCYAKSG---------------- 598
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
N L S + R D VSWN +I+ +NG +E ++ M
Sbjct: 599 ----------------DMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQEAMDCVWLM 642
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ D TF +L+AC+ + L G +H ++ + SD V + L+DMY KCG
Sbjct: 643 LHSGQIMDCCTFSIILNACASVAALERGMEMHAFGIRSHL-ESDVVVESALVDMYSKCGR 701
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ + K+FN MT RN +W ++IS +G ++ALE F EM PD V ++VL+A
Sbjct: 702 VDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKALETFEEMLRSRESPDHVTFVSVLSA 761
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H GLV G+E FE M +G+ P+++HY CV+DLL R G + + ++ I MP PNAL
Sbjct: 762 CSHAGLVERGLEYFEMMP-DHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPMKPNAL 820
Query: 643 IWRTFLEGCQRCR 655
IWRT L C++ +
Sbjct: 821 IWRTVLVACRQSK 833
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 165/666 (24%), Positives = 295/666 (44%), Gaps = 73/666 (10%)
Query: 51 DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWN 110
D+ N E L ++K GL D F+ L+ Y + L VF++MP+++ V+W
Sbjct: 74 DAANSPE--NLHVELIKRGL-NHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWT 130
Query: 111 SIVSIFGKHGFVEDCMFLFCELVRS-EVALTESSFV-GVIHGLSNEQD-----LEFGEQI 163
++S + G E+ +F ++R E +SF G + L QD L F Q+
Sbjct: 131 CLLSGYVLQGITEEAFRVFRAMLREVEPGCRPTSFTFGTL--LRACQDGGPDRLGFATQV 188
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQC--AGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
HGL+ K + V N+L++MY C A+++F IRD+++WN ++ A+
Sbjct: 189 HGLLSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKG 248
Query: 222 NFGKALELYLRMSVD----IVFPNQTTFVYVINSCA-GLQNSILGKSIHAKVIKNALECD 276
+ L++ M + + P + TF +I + + +S + + V+K+ D
Sbjct: 249 DVVSTFTLFMDMQREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVLKSGCSSD 308
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK--------------- 321
++VGSALV +A+ ++ A F + KN V+ N LI+G +
Sbjct: 309 LYVGSALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRN 368
Query: 322 ----SSPTSIFLLIELLQL-----GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRM----G 368
++ T + LL + + G R + H+LR+ L + + ++ M G
Sbjct: 369 TIVVNADTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCG 428
Query: 369 YENYEYVLGSLMTSYAK-------SGLISDALAFVTA------------LNIPRAVVPAN 409
+ + LM + + S L + L ++A L++ +V +N
Sbjct: 429 AIDSASKIFQLMEATDRISWNTIISALDQNGLKLLSAGQQVHCDAVKWGLDLDTSV--SN 486
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN-GDYKEVLELFKYMRAARIY 468
++ +Y G ++ K+ + + D VSWN ++ A + E +E+F M +
Sbjct: 487 VLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMMGVMASSQAPISETVEVFNNMMRGGLI 546
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P+ TFV+LL+A S L L LG H + K ++ D V N LI Y K G + S
Sbjct: 547 PNKVTFVNLLAALSPLSVLELGKQFHAAVLKHGVM-DDNVVDNALISCYAKSGDMNSCEH 605
Query: 529 IFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+F+ M+ R+ ++W ++IS NG+ Q A++ M G D +L AC
Sbjct: 606 LFSNMSGRRDAVSWNSMISGYIYNGYLQEAMDCVWLMLHSGQIMDCCTFSIILNACASVA 665
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
+ GME+ RS+ +E ++ +VD+ + G + A K+ +M N W +
Sbjct: 666 ALERGMEMHAFGIRSH-LESDVVVESALVDMYSKCGRVDYASKLFNSMT-QRNEFSWNSM 723
Query: 648 LEGCQR 653
+ G R
Sbjct: 724 ISGYAR 729
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M RN S+NS+IS Y+R G AL F M+ P TF +LS C VE
Sbjct: 712 MTQRNEFSWNSMISGYARHGLGRKALETFEEMLRSRESPDHVTFVSVLSACSHAGLVERG 771
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIV 113
++ + + ++ L GR G +D++ + MP K + + W +++
Sbjct: 772 LEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPMKPNALIWRTVL 826
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 202/670 (30%), Positives = 338/670 (50%), Gaps = 37/670 (5%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVE-GA 59
P R+ S+ + + +R +A+ ++ M G P F F +L S L ++ G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ A+ +K G + V L+ +YG+ G + +V VF+ + + V+WNS ++ +
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN---EQDLEFGEQIHGLVIKNGFDYEL 176
E + F + + L+ + V V SN L G+Q+HG ++ G D +
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKT 231
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
N+L+ MY + + ++ +F+ RD+VSWNT+I + ++S+ F +AL + M ++
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEG 295
V + T V+ +C+ L+ +GK IHA V++N L + FVGSALVD Y C +E
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351
Query: 296 AHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQL-GYRPNEFTFSHVLRSSL 353
F I + I WNA+I GYA ++ L IE++++ G PN T + V+ + +
Sbjct: 352 GRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACV 411
Query: 354 AFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ +H +++G++ YV +LM Y++ G + + ++ + V
Sbjct: 412 HCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNT 471
Query: 410 IIAGIYNRTGQYNETVKLLSQLER-PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+I G Y +G+Y+ + LL +++R + G YK
Sbjct: 472 MITG-YVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYK--------------- 515
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P+ T +++L C+ L +A G +H + +++SD V + L+DMY KCG + S +
Sbjct: 516 PNAITLMTVLPGCAALAAIAKGKEIHAYAIRN-MLASDITVGSALVDMYAKCGCLNLSRR 574
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG-----FKPDRVALIAVLTAC 583
+FNEM ++NVITW LI A G++G + ALE F+ M KP+ V I V AC
Sbjct: 575 VFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAAC 634
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL- 642
H GL+ EG+ LF RM +GVEP DHY CVVDLL R G L+EA +++ TMP + +
Sbjct: 635 SHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVG 694
Query: 643 IWRTFLEGCQ 652
W + L C+
Sbjct: 695 AWSSLLGACR 704
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 184/564 (32%), Positives = 294/564 (52%), Gaps = 41/564 (7%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF+ +P+ S+V WN ++ + G + ++L+ +++ V T +F ++ S+ Q
Sbjct: 63 VFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQA 122
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV--EIRDVVSWNTII 214
L+ G IH G +L V+ +L++MY +C ++ A+ +F + + RD+V+WN +I
Sbjct: 123 LQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMI 182
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
A + + + +M V PN +T V ++ + GK+IHA I+N
Sbjct: 183 AAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFF 242
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-- 332
+V + +AL+D YAKC L A F+ ++ KN V W+A+I GY S + L +
Sbjct: 243 DNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDM 302
Query: 333 LLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
L G P T + +LR+ L+ LHC +I+ G + V SL++ YAK G+
Sbjct: 303 LCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGI 362
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
+ +A+ F L ++ D VS++ +I+ C
Sbjct: 363 MDNAVGF--------------------------------LDEMIAKDTVSYSAIISGCVQ 390
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
NG ++ L +F+ M+++ I P T ++LL ACS L L G+ HG ++DT
Sbjct: 391 NGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGY-TVVRGFTNDTS 449
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+CN +IDMY KCG I S +IF+ M +R++I+W +I G++G AL F+E++ LG
Sbjct: 450 ICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALG 509
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
KPD V LIAVL+AC H GLV EG F M++++ ++P M HY C+VDLL R G+L EA
Sbjct: 510 LKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEA 569
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
I MPF PN IW L C+
Sbjct: 570 YTFIQRMPFVPNVRIWGALLAACR 593
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 144/583 (24%), Positives = 271/583 (46%), Gaps = 52/583 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+P +VV +N +I Y+ G + ++ ++L+M+ G PT FTF LL +C SL ++
Sbjct: 67 IPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLG 126
Query: 60 QL---QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR--KSLVTWNSIVS 114
+L A +L GL D +V TALL +Y + G L + ++F + + +V WN++++
Sbjct: 127 RLIHTHAHIL--GL-SMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIA 183
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
F H + ++ ++ V S+ V ++ + L G+ IH I+N F
Sbjct: 184 AFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFD 243
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM- 233
+++ +L++MY +C ++ A K+F V ++ V W+ +IG ++ AL LY M
Sbjct: 244 NVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDML 303
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ + P T ++ +CA L + GK +H +IK+ ++ D VG++L+ YAKC +
Sbjct: 304 CIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIM 363
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSS 352
+ A E+ K+ VS++A+I G L+ +Q G P T +L +
Sbjct: 364 DNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPAC 423
Query: 353 LAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
LQ H + G+ N + +++ Y+K G I+ I R
Sbjct: 424 SHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKIT----------ISR----- 468
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
++ +++ DI+SWN +I +G E L LF+ ++A +
Sbjct: 469 -----------------EIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLK 511
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT--FVCNMLIDMYGKCGSIGSS 526
PD+ T +++LSACS + G + + I ++C ++D+ + G++ +
Sbjct: 512 PDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYIC--MVDLLARAGNLDEA 569
Query: 527 VKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
M NV W AL++A + + + ++++ LG
Sbjct: 570 YTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLG 612
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 200/424 (47%), Gaps = 45/424 (10%)
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
A L + I A +F + VV WN +I A S F +++ LYL M V
Sbjct: 44 ATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGV 103
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P TF +++ +C+ LQ LG+ IH L D++V +AL+ YAKC +L A
Sbjct: 104 TPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQT 163
Query: 299 CFSEIS--NKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----RS 351
F+ IS +++IV+WNA+I ++ + +I + ++ Q G PN T +L ++
Sbjct: 164 LFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQA 223
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ Q +H IR + + + +L+ YAK L+
Sbjct: 224 NALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLL---------------------- 261
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY--- 468
Y R K+ + + + + V W+ +I + + L L+ M IY
Sbjct: 262 --FYAR--------KIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLC--IYGLN 309
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P T ++L AC++L +L G LH + K+ + DT V N LI MY KCG + ++V
Sbjct: 310 PTPATLATMLRACAQLTDLKRGKKLHCHMIKSG-MDLDTTVGNSLISMYAKCGIMDNAVG 368
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+EM ++ ++++A+IS NG+A++AL FR+M+ G P +IA+L AC H
Sbjct: 369 FLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAA 428
Query: 589 VREG 592
++ G
Sbjct: 429 LQHG 432
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 192/651 (29%), Positives = 327/651 (50%), Gaps = 39/651 (5%)
Query: 8 SFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQASVL 66
++N +I ++ G AL +L M+ G P ++TF ++ +C L V+ ++ +
Sbjct: 25 AWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETV 84
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
D FVG++L+ LY +G L + +F+++P+K V WN +++ + K+G + +
Sbjct: 85 NLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAI 144
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
+F E+ SE+ +F V+ ++E L+ G Q+HG+ + G + + VAN+L+ MY
Sbjct: 145 KIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMY 204
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+C + +A K+F + D+VSWN II ++ G+A L+ M + P+ TF
Sbjct: 205 SKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFA 264
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
+ L + K IH +I++A+ DVF+ SAL+D Y KC ++E A + S+
Sbjct: 265 SFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSF 324
Query: 307 NIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLH 361
+ V +I GY + + ++ L+Q +P TFS + + L +LH
Sbjct: 325 DTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELH 384
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
II+ + +V +++ YAK G + ++ ++NR
Sbjct: 385 GSIIKTKLDEKCHVGSAILDMYAKCGRL-------------------DLACRVFNR---- 421
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
+ D + WN +I +C+ NG E + LF+ M D + LSAC
Sbjct: 422 ---------ITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSAC 472
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
+ L L G +HGL+ K + SD + + LIDMY KCG++ S ++F+ M ++N ++W
Sbjct: 473 ANLPALHYGKEIHGLMIKGP-LRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSW 531
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
++ISA G +G + L F EM G +PD V + +++AC H G V EG+ + M
Sbjct: 532 NSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTE 591
Query: 602 SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
YG+ M+HY CV D+ R G L EA + I +MPFPP+A +W T L C
Sbjct: 592 EYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACH 642
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 150/567 (26%), Positives = 270/567 (47%), Gaps = 45/567 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+P ++ V +N +++ Y + G +A+++FL M + +P TF +LS C S ++ G
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL + GL D+ V LL +Y + CL +F+ +P+ LV+WN I+S + +
Sbjct: 179 TQLHGIAVGCGLEL-DSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQ 237
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + LF ++ + + +F + ++ L+ ++IHG +I++ ++ +
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFL 297
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++L+++YF+C + A+K D V T+I + +ALE + + + +
Sbjct: 298 KSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P TF + + AGL LGK +H +IK L+ VGSA++D YAKC L+ A
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+ I+ K+ + WN++I + P +I L ++ G R + + S L +
Sbjct: 418 VFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPA 477
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L ++H L+I+ + Y SL+ YAK G LN R V
Sbjct: 478 LHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCG----------NLNFSRRV-------- 519
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++R + NE VSWN +I+A ++GD KE L LF M I PD+ T
Sbjct: 520 -FDRMQEKNE-------------VSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVT 565
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFN 531
F+ ++SAC + G + L+ + I + + + C + DM+G+ G + + + N
Sbjct: 566 FLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYAC--VADMFGRAGRLHEAFETIN 623
Query: 532 EMT-DRNVITWTALISALGLNGFAQRA 557
M + W L+ A ++G + A
Sbjct: 624 SMPFPPDAGVWGTLLGACHIHGNVELA 650
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 142/567 (25%), Positives = 259/567 (45%), Gaps = 34/567 (5%)
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
+Y R G L + ++F + WN ++ F G + + +++ + V+ + +
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
F V+ + ++ G+ +H V G ++ V +SL+ +Y + + A+ +F ++
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
+D V WN ++ ++ + G A++++L M + PN TF V++ CA LG
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS- 322
+H + LE D V + L+ Y+KC L+ A F + ++VSWN +I GY
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL-HCLIIRMGYENYEYVLGSLMT 381
+ L ++ G +P+ TF+ L +LL L HC I GY V ++
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFL--PCVNELLSLKHCKEIH-GYIIRHAV---VLD 294
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
+ KS LI IY + K L Q D V
Sbjct: 295 VFLKSALID-----------------------IYFKCRDVEMAQKNLCQSSSFDTVVCTT 331
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I+ NG KE LE F+++ R+ P + TF S+ A + L L LG LHG I KT+
Sbjct: 332 MISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTK 391
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
+ V + ++DMY KCG + + ++FN +T+++ I W ++I++ NG A+ F
Sbjct: 392 -LDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLF 450
Query: 562 REMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR 621
R+M G + D V++ L+AC + + G E+ M + + ++ ++D+ +
Sbjct: 451 RQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKG-PLRSDLYAESSLIDMYAK 509
Query: 622 YGHLKEAEKIITTMPFPPNALIWRTFL 648
G+L + ++ M N + W + +
Sbjct: 510 CGNLNFSRRVFDRMQ-EKNEVSWNSII 535
>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 192/655 (29%), Positives = 341/655 (52%), Gaps = 35/655 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M D++VVS+N++IS Y+ G ++A+ +F M G +P Q +F +LS C + +E G
Sbjct: 112 MEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFG 171
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + + K G + +D V TAL+ +Y + G L+ VF +M +++V+W +++S + +
Sbjct: 172 EQIHSHITKAG-YESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQ 230
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG ++ LF +L+RS + SF ++ +N DLE G ++H + + G + E+LV
Sbjct: 231 HGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLV 290
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L++MY +C + +A ++F ++ + VSWN +I E +A L+ M
Sbjct: 291 GNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGEG-FMEEAFRLFRDMQQKGF 349
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ T+ ++ CA + GK +H+++++ A E DV V +AL+ YAKC +LE A
Sbjct: 350 QPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARK 409
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQL 357
F+++ KN VSWNA I S F + + ++ P+ TF +L S + +
Sbjct: 410 VFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPE- 468
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+E Y+ G + + G++S+ L AN + +Y R
Sbjct: 469 ----------DFERGRYIHGKI----DQWGMLSNNLV-------------ANALISMYGR 501
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G+ + ++ ++ R D+ SWN +IAA +G +LF ++ D YTF+++
Sbjct: 502 CGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINV 561
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L A + L +L G +HGL++K + D + LI MY KCGS+ + +F + +++
Sbjct: 562 LRAIANLEDLDAGRKIHGLVEKAGL-EKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKD 620
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
V+ W A+++A + Q AL+ F++M G PD +VL AC G + G +
Sbjct: 621 VVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKKFHT 680
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++ + +E + HY C+V L R LKEAE+ I + +AL+W + L C+
Sbjct: 681 QLKEA-AMETDTRHYACMVAALGRASLLKEAEEFIEEISSESDALMWESLLVACR 734
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 158/588 (26%), Positives = 302/588 (51%), Gaps = 41/588 (6%)
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
+++ F D ++ L+ +Y + G +++ +VF+ M K +V+WN+++S + HG ++
Sbjct: 77 MRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEA 136
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
+ LF ++ R + ++SF+ ++ LEFGEQIH + K G++ ++ V+ +L+NM
Sbjct: 137 VDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINM 196
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C + A K+F ++ R+VVSW +I + + +A L+ ++ PN+ +F
Sbjct: 197 YCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSF 256
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
++ +C + G +HA + + LE +V VG+AL+ YA+C +L A F + +
Sbjct: 257 ASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRS 316
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL-----RSSLAFQLLQL 360
N VSWNA+I GY + L ++ Q G++P+ FT++ +L R+ L + +L
Sbjct: 317 PNRVSWNAMIAGYGEGFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLN-RGKEL 375
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H I+R +E V +L++ YAK G + +A
Sbjct: 376 HSQIVRTAWEADVTVATALISMYAKCGSLEEAR--------------------------- 408
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
K+ +Q+ + VSWN IA C +G KE ++FK MR + PD+ TF++LL++
Sbjct: 409 -----KVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNS 463
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C+ + G +HG I + ++S++ V N LI MYG+CG + + ++F + R++ +
Sbjct: 464 CTSPEDFERGRYIHGKIDQWGMLSNN-LVANALISMYGRCGKLADAREVFYRIRRRDLGS 522
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W A+I+A +G A + F + + G K D+ I VL A + + G ++ +
Sbjct: 523 WNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVE 582
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
++ G+E ++ ++ + + G L++A + + + + W L
Sbjct: 583 KA-GLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQ-EKDVVCWNAML 628
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 221/434 (50%), Gaps = 39/434 (8%)
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+ L G+++H + F+ ++ + N L++MY +C I A +F+ +E +DVVSWN +I
Sbjct: 65 KSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMI 124
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
A +A++L+ +M + + PNQ +F+ ++++C G+ IH+ + K E
Sbjct: 125 SGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYE 184
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-L 333
DV V +AL++ Y KC +LE A F+E+ +N+VSW A+I GY F+L + L
Sbjct: 185 SDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKL 244
Query: 334 LQLGYRPNEFTFSHVLRSSLA----FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
++ G +PN+ +F+ +L + Q L+LH I + G E V +L++ YA+ G +
Sbjct: 245 IRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSL 304
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
++A ++ L P+ VSWN +IA
Sbjct: 305 ANAR--------------------------------QVFDNLRSPNRVSWNAMIAGYGE- 331
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
G +E LF+ M+ PD +T+ SLL+ C+ +L G LH I +T +D V
Sbjct: 332 GFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRT-AWEADVTV 390
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
LI MY KCGS+ + K+FN+M ++N ++W A I+ +G + A + F++M
Sbjct: 391 ATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDV 450
Query: 570 KPDRVALIAVLTAC 583
PD V I +L +C
Sbjct: 451 IPDHVTFITLLNSC 464
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 204/421 (48%), Gaps = 41/421 (9%)
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V N + + C ++ GK +H + E D+++ + L+ Y+KC ++E A+
Sbjct: 47 VQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDAN 106
Query: 298 LCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + +K++VSWNA+I GYA ++ L ++ + G +PN+ +F +L +
Sbjct: 107 NVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPI 166
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+L Q+H I + GYE+ V +L+ Y K G +L + R
Sbjct: 167 VLEFGEQIHSHITKAGYESDVNVSTALINMYCKCG----------SLELAR--------- 207
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K+ +++ ++VSW +I+ +GD KE LF+ + + P+
Sbjct: 208 -------------KVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKV 254
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+F S+L AC+ +L G LH IK+ + + V N LI MY +CGS+ ++ ++F+
Sbjct: 255 SFASILGACTNPNDLEQGLKLHAYIKQAG-LEQEVLVGNALISMYARCGSLANARQVFDN 313
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ N ++W A+I+ G GF + A FR+M+ GF+PDR ++L C + G
Sbjct: 314 LRSPNRVSWNAMIAGYG-EGFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRG 372
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
EL ++ R+ E ++ ++ + + G L+EA K+ MP NA+ W F+ C
Sbjct: 373 KELHSQIVRT-AWEADVTVATALISMYAKCGSLEEARKVFNQMP-EKNAVSWNAFIACCC 430
Query: 653 R 653
R
Sbjct: 431 R 431
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 200/658 (30%), Positives = 332/658 (50%), Gaps = 41/658 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFL--YMINRGFEPTQFTFGGLLSCDSL-NPVE 57
+P RN + + + ++R G V AL FL + + G G L C S+ + V
Sbjct: 64 IPHRN--TLDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCGSVPDRVL 121
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G QL ++ G D VGT+L+ +Y + + + VFE MP++++VTW S+++ +
Sbjct: 122 GKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYI 181
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G + D M LF + V +F V+ ++++ ++ G ++H +K G +
Sbjct: 182 QDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVF 241
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V NSL+NMY +C + A +F +E RD+VSWNT++ L + + +AL+L+ I
Sbjct: 242 VCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSI 301
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
Q+T+ VI CA ++ L + +H+ V+K V +AL+D Y+K L A
Sbjct: 302 TMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNAL 361
Query: 298 LCFSEIS-NKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F +S ++N+VSW A+I G P + L + + G PN+FT+S +L +S+A
Sbjct: 362 DIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVAS 421
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
Q+H +I+ YE V +L+ SY+K +AL+
Sbjct: 422 LPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALS--------------------- 460
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ +++ D+VSW+ ++ A GD +F M + P+ +T
Sbjct: 461 -----------IFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTIS 509
Query: 476 SLLSAC-SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S++ AC S + LG H + K + V + L+ MY + GSI S+ IF T
Sbjct: 510 SVIDACASPTAGVDLGRQFHAISIKHRCHDA-LCVSSALVSMYARKGSIESAQCIFERQT 568
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
DR++++W +++S +G++Q+AL+ FR+ME G + D V ++V+ C H GLV EG
Sbjct: 569 DRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQR 628
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+ M R YG+ P M+HY C+VDL R G L EA +I M FP ++WRT L C+
Sbjct: 629 YFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACK 686
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/597 (31%), Positives = 306/597 (51%), Gaps = 50/597 (8%)
Query: 73 ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV-----SIFGKHGFVEDCMF 127
D F+ LL +Y + G L VF+ P + LVTWN+I+ S+ G ++ +
Sbjct: 110 GDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLH 169
Query: 128 LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYF 187
LF L S + T + V+ N L E +HG IK G ++++ V+ +LVN+Y
Sbjct: 170 LFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYS 229
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVY 247
+C + A +F + RDVV WN ++ + +A +L+ + P++ +
Sbjct: 230 KCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQL 289
Query: 248 VINSC--AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
++N C AG + LGK +H +K+ L+ DV V ++LV+ Y+K A F+++ +
Sbjct: 290 ILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKH 349
Query: 306 KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF--------- 355
+++SWN++I A S S+ L I+LL G +P+ FT + + ++ A
Sbjct: 350 LDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLD 409
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
Q Q+H I+ G+++ +V ++ Y K G + + AGI
Sbjct: 410 QGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDM--------------------VNAGI- 448
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ + + PD V+W +I+ C NG+ + L ++ MR +R+ PD YTF
Sbjct: 449 -----------VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFA 497
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
+L+ A S + L G LH + K + +S D FV L+DMY KCG+I + ++F +M
Sbjct: 498 TLIKASSCVTALEQGRQLHANVIKLDCVS-DPFVGTSLVDMYAKCGNIEDAYRLFKKMNV 556
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
RN+ W A++ L +G A+ A+ F+ M+ G +PDRV+ I +L+AC H GL E E
Sbjct: 557 RNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEY 616
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M YG+EPE++HY C+VD L R G ++EA+K+I TMPF +A I R L C+
Sbjct: 617 LHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACR 673
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 163/627 (25%), Positives = 289/627 (46%), Gaps = 93/627 (14%)
Query: 2 PDRNVVSFNSIISAY-----SRCGYVEDALRMFLYMINRGFEPTQFTFGGL----LSCDS 52
P+R++V++N+I+ AY S G ++ L +F + T+ T + L+
Sbjct: 139 PERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGC 198
Query: 53 LNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
L EG + +K GL D FV AL+ +Y + G + + +F+ M + +V WN +
Sbjct: 199 LWAAEG--VHGYAIKIGLEW-DVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMM 255
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG--LSNEQDLEFGEQIHGLVIKN 170
+ + + G ++ LF E RS + E S +++G + DLE G+Q+HG+ +K+
Sbjct: 256 LKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKS 315
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
G D ++ VANSLVNMY + + A ++F D++ D++SWN++I + A+S +++ L+
Sbjct: 316 GLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLF 375
Query: 231 LRMSVDIVFPNQTTFVYVI-----NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
+ + + + P+ T + +C L GK IHA IK + D+ V S ++D
Sbjct: 376 IDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILD 435
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFT 344
Y KC ++ A + F+ IS + V+W ++I G + ++ + + Q P+E+T
Sbjct: 436 MYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYT 495
Query: 345 FSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
F+ ++++S L QLH +I++ + +V SL+ YAK G I DA +N
Sbjct: 496 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN 555
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
+ +I WN ++ A +G+ +E + LFK
Sbjct: 556 V--------------------------------RNIALWNAMLVGLAQHGNAEEAVNLFK 583
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M++ I PD +F+ +LSACS + + Y
Sbjct: 584 SMKSHGIEPDRVSFIGILSACSH--------------------------AGLTSEAYEYL 617
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
S+ + I E+ ++ L+ ALG G Q E + +E + FK A+L
Sbjct: 618 HSMPNDYGIEPEIEH-----YSCLVDALGRAGLVQ---EADKVIETMPFKASASINRALL 669
Query: 581 TACRHGGLVREGMELFERMNRSYGVEP 607
ACR G V G + R+ + +EP
Sbjct: 670 GACRIQGDVETGKRVAARL---FALEP 693
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 238/493 (48%), Gaps = 29/493 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFT----FGGLLSCDSLNPV 56
M +R+VV +N ++ Y + G ++A ++F G P +F+ G L + +
Sbjct: 244 MRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLE 303
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G Q+ +K+GL +D V +L+ +Y + GC VF DM L++WNS++S
Sbjct: 304 LGKQVHGIAVKSGLD-SDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSC 362
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ-----DLEFGEQIHGLVIKNG 171
+ E+ + LF +L+ + + + + + L+ G+QIH IK G
Sbjct: 363 AQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAG 422
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
FD +L V + +++MY +C + +A +F + D V+W ++I ++ N +AL +Y
Sbjct: 423 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 482
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
RM V P++ TF +I + + + G+ +HA VIK D FVG++LVD YAKC
Sbjct: 483 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 542
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTF----- 345
N+E A+ F +++ +NI WNA+++G A ++ ++ L + G P+ +F
Sbjct: 543 NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 602
Query: 346 --SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA------LAFVT 397
SH +S A++ LH + G E L+ + ++GL+ +A + F
Sbjct: 603 ACSHAGLTSEAYEY--LHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKA 660
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
+ +I RA++ A I G TG+ L LE D ++ ++ A + +V +
Sbjct: 661 SASINRALLGACRIQGDV-ETGK--RVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTD 717
Query: 458 LFKYMRAARIYPD 470
K M+ + D
Sbjct: 718 ARKMMKRKNVKKD 730
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 138/509 (27%), Positives = 237/509 (46%), Gaps = 44/509 (8%)
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+L G+ H ++ +G + ++N+L+ MY +C + SA ++F RD+V+WN I+
Sbjct: 91 HNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAIL 150
Query: 215 GALAES--ENFGKA---LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
GA A S N G A L L+ + + + T V+ C + +H I
Sbjct: 151 GAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAI 210
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF- 328
K LE DVFV ALV+ Y+KC + A L F + +++V WN ++ GY F
Sbjct: 211 KIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQ 270
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSG 387
L E + G RP+EF+ QL+ CL G ++ E LG + A KSG
Sbjct: 271 LFSEFHRSGLRPDEFS----------VQLILNGCLW--AGTDDLE--LGKQVHGIAVKSG 316
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
L SD V AN + +Y++ G ++ + ++ D++SWN +I++CA
Sbjct: 317 LDSD-------------VSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCA 363
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSL-LSACSKLCN----LALGSSLHGLIKKTEI 502
+ +E + LF + + PD++T S+ L+ +K C L G +H K
Sbjct: 364 QSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAG- 422
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
SD V + ++DMY KCG + ++ +FN ++ + + WT++IS NG +AL +
Sbjct: 423 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 482
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV-EPEMDHYHCVVDLLVR 621
M PD ++ A + +G +L + + V +P + +VD+ +
Sbjct: 483 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAK 540
Query: 622 YGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G++++A ++ M N +W L G
Sbjct: 541 CGNIEDAYRLFKKMNV-RNIALWNAMLVG 568
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 188/414 (45%), Gaps = 38/414 (9%)
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
++ + N +LGK HA+++ + D F+ + L+ Y+KC +L A F ++
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 308 IVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL---LQLHCLI 364
+V+WNA++ YA+ S ++ E L L +R + R +LA L L CL
Sbjct: 143 LVTWNAILGAYAA-SVDSNDGNAQEGLHL-FRLLRASLGSTTRMTLAPVLKLCLNSGCLW 200
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
G Y +G + L++ IY++ G+ +
Sbjct: 201 AAEGVHGYAIKIGLEWDVFVSGALVN-----------------------IYSKCGRMRDA 237
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC--S 482
L + D+V WN+++ G KE +LF + + PD ++ +L+ C +
Sbjct: 238 RLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWA 297
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
+L LG +HG+ K+ + SD V N L++MY K G + ++FN+M ++I+W
Sbjct: 298 GTDDLELGKQVHGIAVKSG-LDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWN 356
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVAL--IAVLTACRHGG---LVREGMELFE 597
++IS+ + + ++ F ++ G KPD L I + TA + G L+ +G ++
Sbjct: 357 SMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHA 416
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
++ G + ++ ++D+ ++ G + A I+ P+ + W + + GC
Sbjct: 417 HAIKA-GFDSDLHVNSGILDMYIKCGDMVNA-GIVFNYISAPDDVAWTSMISGC 468
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 205/687 (29%), Positives = 350/687 (50%), Gaps = 47/687 (6%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQASVLKNG- 69
IS+ + G++++++ + M F+ +G LL C + G Q+ A +LKNG
Sbjct: 51 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 110
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
F + +V T L+ Y + + V +F + +++ +W +IV + + GF ED + F
Sbjct: 111 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGF 170
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
E+ + V V+ + Q + G+ +HG V+K GF + V++SLV+MY +C
Sbjct: 171 IEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKC 230
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A K+F + ++VV+WN++I ++ +A++++ M V+ + P + T +
Sbjct: 231 GVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFL 290
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
++ A L I GK HA I N+L+ D +GS++++FY+K +E A L FS + K++V
Sbjct: 291 SASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVV 350
Query: 310 SWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL----HCLI 364
+WN LI Y + L++ R + T S +L +S ++L HC
Sbjct: 351 TWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYC 410
Query: 365 IRMGYENYEYVLGS-------------------------------LMTSYAKSGLISDAL 393
IR E+ V S L+ +YA+ GL +AL
Sbjct: 411 IRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEAL 470
Query: 394 AFVTAL---NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAAC 446
+ ++P V+ N + + R GQ NE + SQ++ +P++++W +I+
Sbjct: 471 KLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGL 530
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
A +G E + F+ M+ A I P + S+L AC+ + +L G ++HG I + E S
Sbjct: 531 AQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLS- 589
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
V L+DMY KCGSI + K+F+ M+ + + + A+ISA L+G A AL F+ ++
Sbjct: 590 VPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQK 649
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
G +PD + ++L+AC H GLV EG+ LF M + + P M+HY CVV LL R G+L
Sbjct: 650 EGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLD 709
Query: 627 EAEKIITTMPFPPNALIWRTFLEGCQR 653
EA ++I TMPF P+A I + L C+
Sbjct: 710 EALRLILTMPFQPDAHILGSLLTACRE 736
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 150/539 (27%), Positives = 254/539 (47%), Gaps = 44/539 (8%)
Query: 99 EDMPRKSLV-TWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL 157
+D R+SL ++ +S K G +++ + L E+ + + + ++ G E+ L
Sbjct: 36 KDENRRSLYKSYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERAL 95
Query: 158 EFGEQIHGLVIKNG--FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
G+QIH ++KNG F V LV Y +C A ++F + +R+V SW I+G
Sbjct: 96 HTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVG 155
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
AL ++ M + VFP+ V+ +C LQ LGK +H V+K
Sbjct: 156 LQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGA 215
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELL 334
VFV S+LVD Y KC LE A F + KN+V+WN++I+GY + +I + ++
Sbjct: 216 CVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMR 275
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGS-LMTSYAKSGLI 389
G P T + L +S L Q H + I + + + +LGS ++ Y+K GLI
Sbjct: 276 VEGIEPTRVTVASFLSASANLDALIEGKQGHAIAI-LNSLDLDNILGSSIINFYSKVGLI 334
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
DA E V S++ D+V+WN++I++ +
Sbjct: 335 EDA------------------------------ELV--FSRMLEKDVVTWNLLISSYVQH 362
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
+ L + MR+ + D+ T S+LSA + N+ LG H + + SD V
Sbjct: 363 HQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNL-ESDVVV 421
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
N +IDMY KC I + K+F+ T+R+++ W L++A G + AL+ F +M+F
Sbjct: 422 ANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSV 481
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
P+ ++ +V+ G V E ++F +M +S G +P + + ++ L + G EA
Sbjct: 482 PPNVISWNSVILGFLRNGQVNEAKDMFSQM-QSLGFQPNLITWTTLISGLAQSGFGYEA 539
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 173/651 (26%), Positives = 301/651 (46%), Gaps = 87/651 (13%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
RNV S+ +I+ R G+ EDAL F+ M G P F +L +C SL + G +
Sbjct: 145 RNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGV 204
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
VLK G F A FV ++L+ +YG+ G L++ VF+ M K++VTWNS++ + ++G
Sbjct: 205 HGYVLKMG-FGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGL 263
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ + +F ++ + T + + +N L G+Q H + I N D + ++ +S
Sbjct: 264 NQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSS 323
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL-YLRMSVDIVFP 240
++N Y + I AE +F + +DVV+WN +I + + GKAL + +L S ++ F
Sbjct: 324 IINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRF- 382
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T ++++ A N LGK H I+ LE DV V ++++D YAKC+ ++ A F
Sbjct: 383 DSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVF 442
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHV----LRSSLAF 355
+ +++V WN L+ YA L +Q PN +++ V LR+
Sbjct: 443 DSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVN 502
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL---------------- 399
+ + + +G++ +L++ A+SG +A+ F +
Sbjct: 503 EAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVL 562
Query: 400 ----NIP-----RAV------------VP-ANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
+IP RA+ VP A + +Y + G +E K+ + ++
Sbjct: 563 LACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELP 622
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
+N +I+A A +G E L LFK+++ I PD+ TF S+LSACS GL+
Sbjct: 623 IYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHA----------GLV 672
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
+ N+ DM K N + + + ++S L G A
Sbjct: 673 NEG---------LNLFADMVSKHN--------MNPIMEH----YGCVVSLLSRCGNLDEA 711
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS-YGVEP 607
L R + + F+PD L ++LTACR +EL E +++ + +EP
Sbjct: 712 L---RLILTMPFQPDAHILGSLLTACRE----HHEIELGEYLSKHLFKLEP 755
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 149/308 (48%), Gaps = 26/308 (8%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQ 62
+ +VV NSII Y++C ++DA ++F R + LL+ + + G L+
Sbjct: 416 ESDVVVANSIIDMYAKCERIDDARKVFDSTTERDL----VLWNTLLAAYAQVGLSGEALK 471
Query: 63 -------ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP----RKSLVTWNS 111
SV N + +G + R+G ++E +F M + +L+TW +
Sbjct: 472 LFYQMQFDSVPPNVISWNSVILG------FLRNGQVNEAKDMFSQMQSLGFQPNLITWTT 525
Query: 112 IVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG 171
++S + GF + + F ++ + + + +S V+ ++ L +G IHG + ++
Sbjct: 526 LISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHE 585
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
F + VA SLV+MY +C I A+K+F + +++ +N +I A A +AL L+
Sbjct: 586 FCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFK 645
Query: 232 RMSVDIVFPNQTTFVYVINSC--AGLQNSILGKSIHAKVI-KNALECDVFVGSALVDFYA 288
+ + + P+ TF ++++C AGL N G ++ A ++ K+ + + +V +
Sbjct: 646 HLQKEGIEPDSITFTSILSACSHAGLVNE--GLNLFADMVSKHNMNPIMEHYGCVVSLLS 703
Query: 289 KCDNLEGA 296
+C NL+ A
Sbjct: 704 RCGNLDEA 711
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
M + + +N++ISAY+ G +AL +F ++ G EP TF +LS C V EG
Sbjct: 616 MSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEG 675
Query: 59 AQLQASVL-KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP 102
L A ++ K+ + G ++ L R G LDE + + MP
Sbjct: 676 LNLFADMVSKHNMNPIMEHYG-CVVSLLSRCGNLDEALRLILTMP 719
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 201/672 (29%), Positives = 332/672 (49%), Gaps = 41/672 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
+PD VS++S+++AYS DAL F M + +F +L C + + G Q
Sbjct: 63 IPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKC-APDAGFGTQ 121
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKH 119
L A + GL D FV AL+ +YG G +DE VF++ ++ V+WN ++S + K+
Sbjct: 122 LHALAMATGL-GGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ +F E+V V E F V++ + +DLE G ++H +VI+ G+D ++ A
Sbjct: 181 DRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTA 240
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+LV+MY + I A +F V DVVSWN I + ALEL L+M +
Sbjct: 241 NALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN T ++ +CAG LG+ IH ++K + D ++ LVD YAK L+ A
Sbjct: 301 PNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKV 360
Query: 300 FSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F I +++V WNALI G + + ++ L + + G+ N T + VL+S+ + + +
Sbjct: 361 FDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAI 420
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q+H L ++G+ + +V+ L+ SY K + N +
Sbjct: 421 SDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCL-------------------NYAYRV 461
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+ + G Y DI+++ +I A + ++ ++LF M + PD +
Sbjct: 462 FEKHGSY-------------DIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVL 508
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
SLL+AC+ L G +H + K + + SD F N L+ Y KCGSI + F+ +
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFM-SDVFAGNALVYTYAKCGSIEDADLAFSGLP 567
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
++ V++W+A+I L +G +RAL+ F M P+ + + +VL AC H GLV E
Sbjct: 568 EKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKR 627
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC 654
F M +G+E +HY C++DLL R G L +A +++ +MPF NA +W L +
Sbjct: 628 YFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVH 687
Query: 655 RIAKYDTLNSTK 666
R + L + K
Sbjct: 688 RDPELGRLAAEK 699
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 151/534 (28%), Positives = 256/534 (47%), Gaps = 45/534 (8%)
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
++GA + A +LK+GLF A LL Y + VF+++P V+W+S+V+
Sbjct: 21 LQGAHIHAHLLKSGLF---AVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTA 77
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ + D + F + V E V L D FG Q+H L + G +
Sbjct: 78 YSNNAMPRDALGAFRSMRSCSVRCNEFVLPVV---LKCAPDAGFGTQLHALAMATGLGGD 134
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEI-RDVVSWNTIIGALAESENFGKALELYLRMS 234
+ VAN+LV MY + A +F + R+ VSWN ++ A +++ A++++ M
Sbjct: 135 IFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMV 194
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
V PN+ F V+N+C G ++ G+ +HA VI+ + DVF +ALVD Y+K ++
Sbjct: 195 WGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIR 254
Query: 295 GAHLCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-- 351
A + F ++ ++VSWNA I G ++ LL+++ G PN FT S +L++
Sbjct: 255 MAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACA 314
Query: 352 -SLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
S AF L Q+H +++ ++ Y+ L+ YAK GL+ DA
Sbjct: 315 GSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDA----------------- 357
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
K+ + + D+V WN +I+ C+H + E L LF MR
Sbjct: 358 ---------------KKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDV 402
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ T ++L + + L ++ +H L +K + SD+ V N LID Y KC + + ++
Sbjct: 403 NRTTLAAVLKSTASLEAISDTRQVHALAEKLGFL-SDSHVVNGLIDSYWKCDCLNYAYRV 461
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
F + ++I +T++I+AL + A++ F EM G PD L ++L AC
Sbjct: 462 FEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNAC 515
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 183/405 (45%), Gaps = 42/405 (10%)
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
A Q+ + G IHA ++K+ L VF + L+ FY+KC A F EI + VSW+
Sbjct: 15 AATQSLLQGAHIHAHLLKSGLFA-VFR-NHLLSFYSKCRLPGSARRVFDEIPDPCHVSWS 72
Query: 313 ALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL-LQLHCLIIRMGYE 370
+L+ Y++ + P ++ + R NEF VL+ + QLH L + G
Sbjct: 73 SLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQLHALAMATGLG 132
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+V +L+ Y G + +A +++ G T
Sbjct: 133 GDIFVANALVAMYGGFGFVDEARM-------------------VFDEAGCERNT------ 167
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
VSWN +++A N +++F M + P+ + F +++AC+ +L G
Sbjct: 168 ------VSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAG 221
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+H ++ +T D F N L+DMY K G I + +F ++ + +V++W A IS L
Sbjct: 222 RKVHAMVIRTG-YDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVL 280
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
+G Q ALE +M+ G P+ L ++L AC G G ++ M ++ + D
Sbjct: 281 HGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKA---NADSD 337
Query: 611 HYHC--VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+Y +VD+ ++G L +A+K+ +P + ++W + GC
Sbjct: 338 NYIAFGLVDMYAKHGLLDDAKKVFDWIP-QRDLVLWNALISGCSH 381
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 7/176 (3%)
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T LL+ + +L G+ +H + K+ + + N L+ Y KC GS+ ++F+E
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKSGLFA---VFRNHLLSFYSKCRLPGSARRVFDE 62
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ D ++W++L++A N + AL FR M + + L VL G G
Sbjct: 63 IPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGF---G 119
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+L + + G+ ++ + +V + +G + EA + N + W +
Sbjct: 120 TQL-HALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLM 174
>gi|224079788|ref|XP_002305943.1| predicted protein [Populus trichocarpa]
gi|222848907|gb|EEE86454.1| predicted protein [Populus trichocarpa]
Length = 693
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 202/664 (30%), Positives = 338/664 (50%), Gaps = 43/664 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
MP R+VVS+ I+SAY + E+AL MF M+ G P +FTF +L +C +L +G
Sbjct: 1 MPSRDVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSDG 60
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V+K+G F ++ +G+ L+ LY ++G ++E +F + +V+W +++S +
Sbjct: 61 KCIHGCVIKHG-FESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQ 119
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + ++ +++++ V E +FV V+ + L+ G+ +H +I G + L+V
Sbjct: 120 AGKWSQALRIYIDMIKAGVYPNEFTFVKVL-AAAGFLGLKHGKVVHAHLIVFGVELNLVV 178
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LV+MY +C + A ++ K D W I+ LA++ +A+ + M +
Sbjct: 179 KTALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEASGI 238
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN-LEGAH 297
N T++ ++N+C+ + + LG+ IHA+VI LE D+ VG+ALVD Y KC + +E
Sbjct: 239 LSNNFTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVDMYMKCSHEVEDGL 298
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRS----S 352
F I + +++SW +LI G + F +E+ G +PN T S +LRS
Sbjct: 299 RVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRAAK 358
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
A QLL+LH +I+ ++ V +L+ +YA + + DA
Sbjct: 359 SASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAW------------------- 399
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
L+ + + D +++ + G ++ L + +M I D Y
Sbjct: 400 -------------HLIRNMSQRDALTYTGLATRLNQMGHHEMALHVINHMFNDDIKMDGY 446
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+ LSA + L ++ G LH K+ + SS + V N L+ YGKCG + + F E
Sbjct: 447 SMAGFLSASAGLNSVETGMQLHSYSVKSGLGSSIS-VSNGLVSFYGKCGLTRDAERAFAE 505
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ + ++++W LIS L G AL F +M G KPD V + VL C H GLV G
Sbjct: 506 IREPDIVSWNGLISVLASYGHISSALSAFDDMRLTGVKPDSVTFLLVLFTCTHCGLVDMG 565
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+E F M +G+EP++DHY C+ DLL R G L+EA +I+ TMP PNA I++T L C+
Sbjct: 566 LEYFNSMKEMHGIEPQLDHYVCLFDLLGRAGRLEEAMEILETMPIRPNASIYKTLLAACK 625
Query: 653 RCRI 656
RI
Sbjct: 626 VHRI 629
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 194/662 (29%), Positives = 336/662 (50%), Gaps = 39/662 (5%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLK 67
N ++ +YSR ++AL +F+ +++ +P + T + + SL+ G Q+ +K
Sbjct: 62 NQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVK 121
Query: 68 NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMF 127
GL VGT+L+ +Y + +++ VF++M +++V+W S+++ + +G
Sbjct: 122 FGL-VDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWE 180
Query: 128 LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYF 187
LFC++ V + VI L NE + G Q+H +V+K+GF+ + V NSL+++Y
Sbjct: 181 LFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYS 240
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVY 247
+ + A +F +EIRD V+WN++I + + E++ +M + V P TF
Sbjct: 241 RLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFAS 300
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN-K 306
VI SCA L+ L K + K +K+ D V +AL+ +KC ++ A FS + K
Sbjct: 301 VIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGK 360
Query: 307 NIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLII 365
N+VSW A+I G + + ++ L ++ + G +PN FT+S +L + ++H +I
Sbjct: 361 NVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVI 420
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
+ YE V +L+ +Y K G DA V
Sbjct: 421 KTNYERSSSVGTALLDAYVKLGNTIDA--------------------------------V 448
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
K+ +E D+++W+ ++A A G+ +E +LF + I P+ +TF S+++AC+
Sbjct: 449 KVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPT 508
Query: 486 NLA-LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
A G H K +++ V + L+ MY K G+I S+ ++F +R++++W ++
Sbjct: 509 AAAEQGKQFHAYAIKMR-LNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSM 567
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
IS +G A++ALE F EM+ D V I V+TAC H GLV +G + F M +
Sbjct: 568 ISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHH 627
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYDTLNS 664
+ P M HY C++DL R G L++A II MPFPP A +WRT L + R + L +
Sbjct: 628 INPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAA 687
Query: 665 TK 666
K
Sbjct: 688 EK 689
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 153/557 (27%), Positives = 264/557 (47%), Gaps = 47/557 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M +RNVVS+ S+++ YS G +F M G P ++T +++ V G
Sbjct: 154 MGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIG 213
Query: 61 LQ--ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
LQ A V+K+G F V +L+ LY R G L + VF+ M + VTWNS+++ + +
Sbjct: 214 LQVHAMVVKHG-FEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVR 272
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + +F ++ + V T +F VI ++ ++L + + +K+GF + +V
Sbjct: 273 NGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIV 332
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEI-RDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+L+ +C + A +F +E ++VVSW +I ++ +A+ L+ +M +
Sbjct: 333 ITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREG 392
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN T+ ++ + + +HA+VIK E VG+AL+D Y K N A
Sbjct: 393 VKPNHFTYSAILT----VHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAV 448
Query: 298 LCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLR-----S 351
F I K++++W+A++ GYA + + + L +L++ G +PNEFTFS V+ +
Sbjct: 449 KVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPT 508
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ A Q Q H I+M N V +L+T YAK G I A
Sbjct: 509 AAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSA------------------- 549
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+E K Q ER D+VSWN +I+ + +G K+ LE+F M+ + D
Sbjct: 550 ----------HEVFK--RQKER-DLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDA 596
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+ +++AC+ + G + I+ + +ID+Y + G + ++ I N
Sbjct: 597 VTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIIN 656
Query: 532 EMT-DRNVITWTALISA 547
EM W L+ A
Sbjct: 657 EMPFPPGATVWRTLLGA 673
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQL 61
+R++VS+NS+IS YS+ G + AL +F M R + TF G+++ C VE Q
Sbjct: 558 ERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQK 617
Query: 62 QASVLKNGLFCADAFVG-TALLGLYGRHGCLDEVVSVFEDMPRKSLVT-WNSIVSIFGKH 119
+ + N + ++ LY R G L++ + + +MP T W +++ H
Sbjct: 618 YFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVH 677
Query: 120 GFVE 123
VE
Sbjct: 678 RNVE 681
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 288/545 (52%), Gaps = 38/545 (6%)
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
VSI K G +++ + + ++ + F G++ + + LE G ++H ++K+G
Sbjct: 68 VSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 127
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ N+L++MY +C + A ++F + R++VSW +I A +A + Y
Sbjct: 128 QPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYET 187
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M + P++ TFV ++N+ + +G+ +H ++ K LE + VG++LV YAKC +
Sbjct: 188 MKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGD 247
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLR- 350
+ A + F ++ KN+V+W LI GYA + ++ LL ++ Q PN+ T++ +L+
Sbjct: 248 ISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQG 307
Query: 351 --SSLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ LA + ++H II+ GY +V+ +L+T Y K G + +A
Sbjct: 308 CTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEAR-------------- 353
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
KL L D+V+W ++ A G + E ++LF+ M+ I
Sbjct: 354 ------------------KLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGI 395
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD TF S L++CS L G S+H + S D ++ + L+ MY KCGS+ +
Sbjct: 396 KPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGY-SLDVYLQSALVSMYAKCGSMDDAR 454
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+FN+M++RNV+ WTA+I+ +G + ALE F +M+ G KPD+V +VL+AC H G
Sbjct: 455 LVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVG 514
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
LV EG + F M YG++P ++HY C VDLL R GHL+EAE +I TMPF P +W
Sbjct: 515 LVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGAL 574
Query: 648 LEGCQ 652
L C+
Sbjct: 575 LSACR 579
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 199/351 (56%), Gaps = 6/351 (1%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP---VEGA 59
DRN+VS+ ++I A+ +A + + M G +P + TF LL+ + NP G
Sbjct: 159 DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFT-NPELLQVGQ 217
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ + K GL + VGT+L+G+Y + G + + +F+ +P K++VTW +++ + +
Sbjct: 218 KVHMEIAKAGLEL-EPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQ 276
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G V+ + L ++ ++EVA + ++ ++ G + LE G+++H +I++G+ E+ V
Sbjct: 277 GQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVV 336
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L+ MY +C G+ A K+F D+ RDVV+W ++ A+ +A++L+ RM +
Sbjct: 337 NALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIK 396
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P++ TF + SC+ GKSIH +++ DV++ SALV YAKC +++ A L
Sbjct: 397 PDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLV 456
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVL 349
F+++S +N+V+W A+I G A E + + G +P++ TF+ VL
Sbjct: 457 FNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVL 507
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 143/568 (25%), Positives = 265/568 (46%), Gaps = 43/568 (7%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQASVLKNGL 70
+S + G +++AL + MI +G F GLL C L +E G ++ A++LK+G+
Sbjct: 68 VSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 127
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFC 130
+ ++ LL +Y + G L + VF+ + +++V+W +++ F + +
Sbjct: 128 Q-PNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYE 186
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
+ + + +FV +++ +N + L+ G+++H + K G + E V SLV MY +C
Sbjct: 187 TMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCG 246
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
I A+ +F + ++VV+W +I A+ ALEL +M V PN+ T+ ++
Sbjct: 247 DISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQ 306
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
C GK +H +I++ +++V +AL+ Y KC L+ A F ++ ++++V+
Sbjct: 307 GCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVT 366
Query: 311 WNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLII 365
W A++ GYA +I L + Q G +P++ TF+ L S + LQ +H ++
Sbjct: 367 WTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLV 426
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
GY Y+ +L++ YAK G + DA
Sbjct: 427 HAGYSLDVYLQSALVSMYAKCGSMDDARL------------------------------- 455
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
+ +Q+ ++V+W +I CA +G +E LE F+ M+ I PD TF S+LSAC+ +
Sbjct: 456 -VFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVG 514
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTAL 544
+ G + I + +D+ G+ G + + + M W AL
Sbjct: 515 LVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGAL 574
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPD 572
+SA ++ +R E+ E L PD
Sbjct: 575 LSACRIHSDVERG-ERAAE-NVLKLDPD 600
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 140/254 (55%), Gaps = 3/254 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+P++NVV++ +I+ Y++ G V+ AL + M P + T+ +L C + +E G
Sbjct: 258 LPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHG 317
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ ++++G + + +V AL+ +Y + G L E +F D+P + +VTW ++V+ + +
Sbjct: 318 KKVHRYIIQSG-YGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQ 376
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
GF ++ + LF + + + + +F + S+ L+ G+ IH ++ G+ ++ +
Sbjct: 377 LGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYL 436
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++LV+MY +C + A +F + R+VV+W +I A+ +ALE + +M +
Sbjct: 437 QSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGI 496
Query: 239 FPNQTTFVYVINSC 252
P++ TF V+++C
Sbjct: 497 KPDKVTFTSVLSAC 510
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 206/666 (30%), Positives = 334/666 (50%), Gaps = 59/666 (8%)
Query: 7 VSF-NSIISAYSRCGYVEDALRMFLYMINRGFEPTQF--------TFGGLLSCDSLNPVE 57
VSF N++I Y+ G+ +DA+ ++L M++ G + +F FGGL CD +
Sbjct: 73 VSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGL--CDVY---K 127
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ VLK G+ D V +LL +Y + G +++ V +FE MP LV+WN+++S F
Sbjct: 128 GRQIHGHVLKLGVL-DDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQ 186
Query: 118 KH-GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
K + MF + + + V I S+ Q L G +IHG+V+K+G D E
Sbjct: 187 KSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEE 246
Query: 177 LVANSLVNMYFQCAGIWSAEKMF-----KDVEIRDVVSWNTIIGALAESENFGKALELYL 231
+ +SL+ MY +C I +AE +F KD R+ V WN +I + F +AL L++
Sbjct: 247 YLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFI 306
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
+M V + P+ +T V + + C+ + GK IH + K L+ ++ V +AL+D Y KC
Sbjct: 307 KMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCG 366
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLR 350
++ F N N++ W+A+I A PT ++ L E + VLR
Sbjct: 367 DMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLR 426
Query: 351 SSLAFQL----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+ + L +Q+H L +MG+ + +V +L+ YAK
Sbjct: 427 ACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKC-------------------- 466
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
R Y++ V L +L + D+VSWN +I+ A + E L+ F+ M+
Sbjct: 467 ----------RDMGYSKKVFL--RLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEE 514
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
I P+ T +LS C+ L + L +HG + + + + S V N LI Y KCG I SS
Sbjct: 515 IRPNTVTIACILSVCAHLSVMTLCKEVHGYLIR-QGLGSTVLVSNSLIATYAKCGDINSS 573
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
+ F +M +RN ++W ++I +G++ + F +M G KPD V A+L+AC H
Sbjct: 574 LYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHA 633
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
G V EG + F+ M + ++P+++ Y C+VDLL R GHL +A +I MP P+ IW +
Sbjct: 634 GRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGS 693
Query: 647 FLEGCQ 652
L C+
Sbjct: 694 LLGSCK 699
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 146/495 (29%), Positives = 238/495 (48%), Gaps = 46/495 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI-NRGFEPTQFT-FGGLLSCDSLNPV-E 57
MP+ ++VS+N++IS + + +L F M+ G P + +LSC SL +
Sbjct: 170 MPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTH 229
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVF-----EDMPRKSLVTWNSI 112
G ++ V+K+GL + V ++L+ +Y + G + ++F +D R++ V WN +
Sbjct: 230 GREIHGVVVKSGLDVEEYLV-SSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVM 288
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+S + +G + LF +++ + S+ V + S D+ FG+QIHGL+ K G
Sbjct: 289 ISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGL 348
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ V +L++MY +C + + K+F+ + +++ W+ +I A+S KALEL+
Sbjct: 349 KNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYE 408
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
++ + V V+ +C+ L G IH K DVFVGSALVD YAKC +
Sbjct: 409 FKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRD 468
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS 351
+ + F +S K++VSWNALI GYA +QL RPN T + +L
Sbjct: 469 MGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSV 528
Query: 352 SLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
++ L H +IR G + V SL+ +YAK G I+ +L T +P
Sbjct: 529 CAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSL--YTFEKMP----- 581
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
ER D VSWN +I + E++ LF M A+ I
Sbjct: 582 ------------------------ERND-VSWNSIILGMGMHSRTDEMIVLFDKMVASGI 616
Query: 468 YPDNYTFVSLLSACS 482
PD+ TF ++LSACS
Sbjct: 617 KPDHVTFTAILSACS 631
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 223/481 (46%), Gaps = 36/481 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQL 61
RN V +N +IS Y G AL +F+ M+ G +P T L S +SL+ G Q+
Sbjct: 280 RNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQI 339
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ K GL + V TALL +Y + G + + +F +L+ W++++S + G
Sbjct: 340 HGLIFKFGLK-NNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGC 398
Query: 122 VEDCMFLFCELVRSEVALTESS-FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ LF E + E L +S V V+ S+ G QIHGL K GF ++ V +
Sbjct: 399 PTKALELFYEF-KMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGS 457
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+LV++Y +C + ++K+F + +D+VSWN +I A+ E +AL+ + M ++ + P
Sbjct: 458 ALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRP 517
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N T +++ CA L L K +H +I+ L V V ++L+ YAKC ++ + F
Sbjct: 518 NTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTF 577
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
++ +N VSWN++ILG S + +L + ++ G +P+ TF+ +L + +
Sbjct: 578 EKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVD 637
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
C Y KS V N+ + + + R G
Sbjct: 638 EGC-------------------KYFKS--------MVEDFNLKPQLEQYTCMVDLLGRAG 670
Query: 420 QYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
N+ L+ + PD W ++ +C ++GD E+L ++ P + + LL
Sbjct: 671 HLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGD--EILAEIVANHIFKLVPSSVGYRVLL 728
Query: 479 S 479
+
Sbjct: 729 A 729
>gi|302788029|ref|XP_002975784.1| hypothetical protein SELMODRAFT_150748 [Selaginella moellendorffii]
gi|300156785|gb|EFJ23413.1| hypothetical protein SELMODRAFT_150748 [Selaginella moellendorffii]
Length = 590
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 293/557 (52%), Gaps = 13/557 (2%)
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
M +K++ +W+ ++ + ++G + LF + + + + V+ S + +L FG
Sbjct: 1 MQQKNVYSWSMMIGAYAQNGRRNEAFLLFERMESEGIRPNAVTCLHVLGACSCQNELPFG 60
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
+++H + + F +++ + SLVNMY +C + A K+F +E +DV+SW+T+I A +S
Sbjct: 61 KKVHAYISASEFKWDISLQTSLVNMYAKCGNLEGARKVFNRLERKDVISWSTMISAYNQS 120
Query: 221 ENFGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+A+E+Y M + V PN TFV VI +C G + I G+ +H +++ LE DV V
Sbjct: 121 GRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGRQVHGRLVSLGLETDVAV 180
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR 339
GSALV Y KC NLE A F + ++++ WN ++ Y+ + SP + + + +
Sbjct: 181 GSALVQLYVKCGNLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYDAMDV--E 238
Query: 340 PNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
PN T+++VL + A + L ++H I+ G E + SL++ Y K + A
Sbjct: 239 PNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETSLLSLYIKCRSLKSACQV 298
Query: 396 VTALNIPRA-VVPANIIAGIYNRTGQYNETVKLLSQL--ERPDIVSWNIVIAACAHNGDY 452
A+ VV + +Y G ++ ER D+V W +IA+ A G
Sbjct: 299 FEAMGKKDTDVVTDTALLNMYAACGNLEAAKRVFGSRRDERRDVVFWTAMIASYAQAGRG 358
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK-KTEIISSDTFVCN 511
+E L L+K M + I P++ T+ S+LSACS L N+ G +H ++ K E + D V N
Sbjct: 359 EEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKIHSSLEGKAEEL--DVAVQN 416
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
L+ +Y +CGS+ + F ++ +R+V +WT +++A +G + RALE REME G P
Sbjct: 417 SLLSLYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFAHHGHSARALELVREMELCGVSP 476
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D V +VL AC H G + G F M Y VEP DHY C+VDLL R G L EA ++
Sbjct: 477 DAVTFQSVLHACSHEGSLERGWASFVSMAVDYAVEPSKDHYLCMVDLLARAGRLAEAREV 536
Query: 632 ITTMPFPPNALIWRTFL 648
I + ++ W L
Sbjct: 537 IQFVGLERESMGWMMLL 553
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 150/593 (25%), Positives = 274/593 (46%), Gaps = 84/593 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M +NV S++ +I AY++ G +A +F M + G P T +L +C N +
Sbjct: 1 MQQKNVYSWSMMIGAYAQNGRRNEAFLLFERMESEGIRPNAVTCLHVLGACSCQNELPFG 60
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + + F D + T+L+ +Y + G L+ VF + RK +++W++++S + +
Sbjct: 61 KKVHAYISASEFKWDISLQTSLVNMYAKCGNLEGARKVFNRLERKDVISWSTMISAYNQS 120
Query: 120 GFVEDCMFLFCELVRSEVALTES--SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + + ++ L+ SE ++ + +FVGVI + D+ G Q+HG ++ G + ++
Sbjct: 121 GRHSEAIEIY-RLMESETSVEPNAVTFVGVIGACTGCGDVIRGRQVHGRLVSLGLETDVA 179
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V ++LV +Y +C + A+K F VE RDV+ WN ++ A +E + + +E Y M V+
Sbjct: 180 VGSALVQLYVKCGNLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYDAMDVE- 238
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE----------------------- 274
PN T+ V+ +C+ +++ G+ +H++++ + LE
Sbjct: 239 --PNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETSLLSLYIKCRSLKSAC 296
Query: 275 ----------CDVFVGSALVDFYAKCDNLEGAHLCFSEISN--KNIVSWNALILGYASKS 322
DV +AL++ YA C NLE A F + +++V W A+I YA
Sbjct: 297 QVFEAMGKKDTDVVTDTALLNMYAACGNLEAAKRVFGSRRDERRDVVFWTAMIASYAQAG 356
Query: 323 -SPTSIFLLIELLQLGYRPNEFTFSHVLR--SSLA--FQLLQLHCLIIRMGYENYEYVLG 377
++ L +L +PN T++ VL SSL + ++H + E V
Sbjct: 357 RGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKIHSSLEGKAEELDVAVQN 416
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
SL++ YA+ G + DA + A I+NR D+
Sbjct: 417 SLLSLYARCGSLRDAWS---------------CFAKIHNR-----------------DVF 444
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG--SSLHG 495
SW ++AA AH+G LEL + M + PD TF S+L ACS +L G S +
Sbjct: 445 SWTGMVAAFAHHGHSARALELVREMELCGVSPDAVTFQSVLHACSHEGSLERGWASFVSM 504
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISA 547
+ S D ++C ++D+ + G + + ++ + +R + W L+ A
Sbjct: 505 AVDYAVEPSKDHYLC--MVDLLARAGRLAEAREVIQFVGLERESMGWMMLLGA 555
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 11/232 (4%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEGAQL 61
R+VV + ++I++Y++ G E+AL ++ M++ +P T+ +LS C SL N +EG ++
Sbjct: 340 RDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKI 399
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+S L+ D V +LL LY R G L + S F + + + +W +V+ F HG
Sbjct: 400 HSS-LEGKAEELDVAVQNSLLSLYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFAHHGH 458
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ L E+ V+ +F V+H S+E LE G + DY + +
Sbjct: 459 SARALELVREMELCGVSPDAVTFQSVLHACSHEGSLERG---WASFVSMAVDYAVEPSKD 515
Query: 182 ----LVNMYFQCAGIWSAEKMFKDVEI-RDVVSWNTIIGALAESENFGKALE 228
+V++ + + A ++ + V + R+ + W ++GA N +E
Sbjct: 516 HYLCMVDLLARAGRLAEAREVIQFVGLERESMGWMMLLGASRTHSNLAMGVE 567
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 201/693 (29%), Positives = 339/693 (48%), Gaps = 80/693 (11%)
Query: 37 FEPTQFTFGGLLSCD-SLNPVEGAQL-QASVLKNGLFCADAFVGTALLGLYGRHGCLDEV 94
P + F LL S NP+ ++ ++ +GL +D F+ L+ + + +D
Sbjct: 23 LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGL-QSDTFLANILINVCSKSDRVDNA 81
Query: 95 VSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSN 153
VF+ MP K+L+TW+S+VS++ + G+ E+ + +F +L R S E VI +
Sbjct: 82 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 141
Query: 154 EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTI 213
+E G Q+HG V+++GFD ++ V SL++ Y + I A +F + + V+W TI
Sbjct: 142 LGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTI 201
Query: 214 IGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
I + +LEL+ +M V P++ V+++C+ L+ GK IHA V++
Sbjct: 202 IAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGT 261
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIE 332
E DV V + L+DFY KC+ ++ F ++ KNI+SW +I GY S ++ L E
Sbjct: 262 EMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGE 321
Query: 333 LLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYV------------- 375
+ +LG++P+ F + VL S + + L Q+H I+ E+ E+V
Sbjct: 322 MNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNL 381
Query: 376 ------------------LGSLMTSYAKSGLISDAL----------------AFVTALNI 401
+++ Y+ +S+AL FV+ L +
Sbjct: 382 LIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGV 441
Query: 402 PRAV-----------------VPANIIAG-----IYNRTGQYNETVKLLSQLERPDIVSW 439
++ V ++ AG +Y++ + + ++ DIV W
Sbjct: 442 SASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVW 501
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
N + + + +E L+L+ ++ +R P+ +TF +L++A S L +L G H + K
Sbjct: 502 NAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVK 561
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+ FV N L+DMY KCGSI + K+FN R+V+ W ++IS +G A+ AL
Sbjct: 562 MGL-DFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALG 620
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
FREM G +P+ V +AVL+AC H G V +G+ F M +G++P +HY CVV LL
Sbjct: 621 MFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMP-GFGIKPGTEHYACVVSLL 679
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G L EA++ I MP P A++WR+ L C+
Sbjct: 680 GRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACR 712
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 154/564 (27%), Positives = 270/564 (47%), Gaps = 50/564 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+ ++ V++ +II+ Y++CG +L +F M P ++ +LS C L +EG
Sbjct: 190 LSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGG 249
Query: 60 -QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A VL+ G D V L+ Y + + +F+ M K++++W +++S + +
Sbjct: 250 KQIHAYVLRRGTEM-DVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQ 308
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ F + M LF E+ R + V+ + + LE G Q+H IK + + V
Sbjct: 309 NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFV 368
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N L++MY + + A+K+F + ++V+S+N +I + E +ALEL+ M V +
Sbjct: 369 KNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLF 428
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ TFV ++ A L L K IH +IK + D+F GSAL+D Y+KC ++ A
Sbjct: 429 PPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARH 488
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQL 357
F E++ K+IV WNA+ GY L LQ +PNEFTF+ ++ ++
Sbjct: 489 VFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLAS 548
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L Q H +++MG + +V +L+ YAK G I +A
Sbjct: 549 LRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEAR-------------------- 588
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
K+ + D+V WN +I+ A +G+ +E L +F+ M I P+ T
Sbjct: 589 ------------KMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVT 636
Query: 474 FVSLLSACSKLCNLALG----SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
FV++LSACS + G +S+ G K ++ + C ++ + G+ G + + +
Sbjct: 637 FVAVLSACSHAGRVEDGLNHFNSMPGFGIKP---GTEHYAC--VVSLLGRSGKLFEAKEF 691
Query: 530 FNEMT-DRNVITWTALISALGLNG 552
+M + I W +L+SA + G
Sbjct: 692 IEKMPIEPAAIVWRSLLSACRIAG 715
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 99/194 (51%), Gaps = 4/194 (2%)
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
++ + P F +LL + +HG I + + SDTF+ N+LI++ K
Sbjct: 18 LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGL-QSDTFLANILINVCSKSD 76
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL-GFKPDRVALIAVL 580
+ ++ +F++M +N+ITW++++S G+++ AL F +++ G P+ L +V+
Sbjct: 77 RVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVI 136
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
AC G+V +G +L + RS G + ++ ++D + G+++EA + +
Sbjct: 137 RACTQLGVVEKGAQLHGFVVRS-GFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLS-EKT 194
Query: 641 ALIWRTFLEGCQRC 654
A+ W T + G +C
Sbjct: 195 AVTWTTIIAGYTKC 208
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 196/658 (29%), Positives = 328/658 (49%), Gaps = 39/658 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M +R++ ++N+++ Y G AL M+ M + G +TF LL +C + + G
Sbjct: 18 MSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCG 77
Query: 59 AQLQASVLKNGLFCAD-AFVGTALLGLYGRHGCLDEVVSVFEDM-PRKSLVTWNSIVSIF 116
A++ +K G C FV +L+ LY + ++ +F+ M R +V+WNSI+S +
Sbjct: 78 AEIHGLAIKYG--CDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAY 135
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+G + + LF E++++ V +F + + ++ G QIH ++K+G ++
Sbjct: 136 SGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDV 195
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VAN+LV MY + + A +F ++E +D+V+WN+++ ++ + +ALE + +
Sbjct: 196 YVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNA 255
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ P+Q + + +I + L + GK IHA IKN + ++ VG+ L+D YAKC +
Sbjct: 256 DLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYG 315
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F +++K+++SW GYA L+ LQ+ + S+
Sbjct: 316 GRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQM----EGMDVDATMIGSILLA 371
Query: 357 LLQLHCLIIRMGYENYEYVLGSL--MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
L+C LG + + Y G +SD V N I +
Sbjct: 372 CRGLNC-------------LGKIKEIHGYTIRGGLSDP-------------VLQNTIIDV 405
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y G + V++ +E D+VSW +I+ HNG + LE+F M+ + PD T
Sbjct: 406 YGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTL 465
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
VS+LSA L L G +HG I + I + + N L+DMY +CGS+ + KIF
Sbjct: 466 VSILSAVCSLSTLKKGKEIHGFIIRKGFILEGS-ISNTLVDMYARCGSVEDAYKIFTCTK 524
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+RN+I WTA+ISA G++G+ + A+E F M+ PD + +A+L AC H GLV EG
Sbjct: 525 NRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKS 584
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
E M Y +EP +HY C+VDLL R L+EA +I+ +M P +W L C+
Sbjct: 585 FLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACR 642
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 157/571 (27%), Positives = 273/571 (47%), Gaps = 42/571 (7%)
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
+YG+ G + + +F+ M +S+ TWN+++ + +G + ++ E+ V+ +
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
F ++ +DL G +IHGL IK G D + V NSLV +Y +C I A K+F +
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 204 IR-DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
+R DVVSWN+II A + + +AL L+ M V N TF + +C LG
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
IHA ++K+ DV+V +ALV Y + + A + F + K+IV+WN+++ G+
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240
Query: 323 -SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLG 377
++ +L +P++ + ++ +S L ++H I+ G+++ V
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
+L+ YAK +S RA + D++
Sbjct: 301 TLIDMYAKCCCMSYG---------GRA-----------------------FDLMAHKDLI 328
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SW A A N Y + LEL + ++ + D S+L AC L L +HG
Sbjct: 329 SWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYT 388
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
+ + SD + N +ID+YG+CG I +V+IF + ++V++WT++IS NG A +A
Sbjct: 389 IRGGL--SDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKA 446
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
LE F M+ G +PD V L+++L+A +++G E+ + R G E + +VD
Sbjct: 447 LEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRK-GFILEGSISNTLVD 505
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ R G +++A KI T N ++W +
Sbjct: 506 MYARCGSVEDAYKIFTCTK-NRNLILWTAMI 535
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 205/687 (29%), Positives = 350/687 (50%), Gaps = 47/687 (6%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQASVLKNG- 69
IS+ + G++++++ + M F+ +G LL C + G Q+ A +LKNG
Sbjct: 1146 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 1205
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
F + +V T L+ Y + + V +F + +++ +W +IV + + GF ED + F
Sbjct: 1206 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGF 1265
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
E+ + V V+ + Q + G+ +HG V+K GF + V++SLV+MY +C
Sbjct: 1266 IEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKC 1325
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A K+F + ++VV+WN++I ++ +A++++ M V+ + P + T +
Sbjct: 1326 GVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFL 1385
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
++ A L I GK HA I N+L+ D +GS++++FY+K +E A L FS + K++V
Sbjct: 1386 SASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVV 1445
Query: 310 SWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL----HCLI 364
+WN LI Y + L++ R + T S +L +S ++L HC
Sbjct: 1446 TWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYC 1505
Query: 365 IRMGYENYEYVLGS-------------------------------LMTSYAKSGLISDAL 393
IR E+ V S L+ +YA+ GL +AL
Sbjct: 1506 IRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEAL 1565
Query: 394 AFVTAL---NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAAC 446
+ ++P V+ N + + R GQ NE + SQ++ +P++++W +I+
Sbjct: 1566 KLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGL 1625
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
A +G E + F+ M+ A I P + S+L AC+ + +L G ++HG I + E S
Sbjct: 1626 AQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLS- 1684
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
V L+DMY KCGSI + K+F+ M+ + + + A+ISA L+G A AL F+ ++
Sbjct: 1685 VPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQK 1744
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
G +PD + ++L+AC H GLV EG+ LF M + + P M+HY CVV LL R G+L
Sbjct: 1745 EGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLD 1804
Query: 627 EAEKIITTMPFPPNALIWRTFLEGCQR 653
EA ++I TMPF P+A I + L C+
Sbjct: 1805 EALRLILTMPFQPDAHILGSLLTACRE 1831
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 150/539 (27%), Positives = 254/539 (47%), Gaps = 44/539 (8%)
Query: 99 EDMPRKSLV-TWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL 157
+D R+SL ++ +S K G +++ + L E+ + + + ++ G E+ L
Sbjct: 1131 KDENRRSLYKSYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERAL 1190
Query: 158 EFGEQIHGLVIKNG--FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
G+QIH ++KNG F V LV Y +C A ++F + +R+V SW I+G
Sbjct: 1191 HTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVG 1250
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
AL ++ M + VFP+ V+ +C LQ LGK +H V+K
Sbjct: 1251 LQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGA 1310
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELL 334
VFV S+LVD Y KC LE A F + KN+V+WN++I+GY + +I + ++
Sbjct: 1311 CVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMR 1370
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGS-LMTSYAKSGLI 389
G P T + L +S L Q H + I + + + +LGS ++ Y+K GLI
Sbjct: 1371 VEGIEPTRVTVASFLSASANLDALIEGKQGHAIAI-LNSLDLDNILGSSIINFYSKVGLI 1429
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
DA E V S++ D+V+WN++I++ +
Sbjct: 1430 EDA------------------------------ELV--FSRMLEKDVVTWNLLISSYVQH 1457
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
+ L + MR+ + D+ T S+LSA + N+ LG H + + SD V
Sbjct: 1458 HQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNL-ESDVVV 1516
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
N +IDMY KC I + K+F+ T+R+++ W L++A G + AL+ F +M+F
Sbjct: 1517 ANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSV 1576
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
P+ ++ +V+ G V E ++F +M +S G +P + + ++ L + G EA
Sbjct: 1577 PPNVISWNSVILGFLRNGQVNEAKDMFSQM-QSLGFQPNLITWTTLISGLAQSGFGYEA 1634
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 173/651 (26%), Positives = 301/651 (46%), Gaps = 87/651 (13%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
RNV S+ +I+ R G+ EDAL F+ M G P F +L +C SL + G +
Sbjct: 1240 RNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGV 1299
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
VLK G F A FV ++L+ +YG+ G L++ VF+ M K++VTWNS++ + ++G
Sbjct: 1300 HGYVLKMG-FGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGL 1358
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ + +F ++ + T + + +N L G+Q H + I N D + ++ +S
Sbjct: 1359 NQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSS 1418
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL-YLRMSVDIVFP 240
++N Y + I AE +F + +DVV+WN +I + + GKAL + +L S ++ F
Sbjct: 1419 IINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRF- 1477
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T ++++ A N LGK H I+ LE DV V ++++D YAKC+ ++ A F
Sbjct: 1478 DSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVF 1537
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHV----LRSSLAF 355
+ +++V WN L+ YA L +Q PN +++ V LR+
Sbjct: 1538 DSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVN 1597
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL---------------- 399
+ + + +G++ +L++ A+SG +A+ F +
Sbjct: 1598 EAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVL 1657
Query: 400 ----NIP-----RAV------------VP-ANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
+IP RA+ VP A + +Y + G +E K+ + ++
Sbjct: 1658 LACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELP 1717
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
+N +I+A A +G E L LFK+++ I PD+ TF S+LSACS GL+
Sbjct: 1718 IYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSH----------AGLV 1767
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
+ N+ DM K N + + + ++S L G A
Sbjct: 1768 NEG---------LNLFADMVSKHN--------MNPIMEH----YGCVVSLLSRCGNLDEA 1806
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS-YGVEP 607
L R + + F+PD L ++LTACR +EL E +++ + +EP
Sbjct: 1807 L---RLILTMPFQPDAHILGSLLTACRE----HHEIELGEYLSKHLFKLEP 1850
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 149/308 (48%), Gaps = 26/308 (8%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQ 62
+ +VV NSII Y++C ++DA ++F R + LL+ + + G L+
Sbjct: 1511 ESDVVVANSIIDMYAKCERIDDARKVFDSTTERDL----VLWNTLLAAYAQVGLSGEALK 1566
Query: 63 -------ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP----RKSLVTWNS 111
SV N + +G + R+G ++E +F M + +L+TW +
Sbjct: 1567 LFYQMQFDSVPPNVISWNSVILG------FLRNGQVNEAKDMFSQMQSLGFQPNLITWTT 1620
Query: 112 IVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG 171
++S + GF + + F ++ + + + +S V+ ++ L +G IHG + ++
Sbjct: 1621 LISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHE 1680
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
F + VA SLV+MY +C I A+K+F + +++ +N +I A A +AL L+
Sbjct: 1681 FCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFK 1740
Query: 232 RMSVDIVFPNQTTFVYVINSC--AGLQNSILGKSIHAKVI-KNALECDVFVGSALVDFYA 288
+ + + P+ TF ++++C AGL N G ++ A ++ K+ + + +V +
Sbjct: 1741 HLQKEGIEPDSITFTSILSACSHAGLVNE--GLNLFADMVSKHNMNPIMEHYGCVVSLLS 1798
Query: 289 KCDNLEGA 296
+C NL+ A
Sbjct: 1799 RCGNLDEA 1806
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
M + + +N++ISAY+ G +AL +F ++ G EP TF +LS C V EG
Sbjct: 1711 MSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEG 1770
Query: 59 AQLQASVL-KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP 102
L A ++ K+ + G ++ L R G LDE + + MP
Sbjct: 1771 LNLFADMVSKHNMNPIMEHYG-CVVSLLSRCGNLDEALRLILTMP 1814
>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Vitis vinifera]
Length = 868
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 199/671 (29%), Positives = 354/671 (52%), Gaps = 23/671 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVE-DALRMF--LYMINRGFEPTQFTFGGLLS-CDSLNPV 56
M R+ V +N ++S + E + +R+F ++M+N +P T +L C L
Sbjct: 100 MDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEA-KPNSVTIAIVLPVCARLRED 158
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCL-DEVVSVFEDMPRKSLVTWNSIVSI 115
G + + V+K+GL + G AL+ +Y + G + + + F + K +V+WN++++
Sbjct: 159 AGKSVHSYVIKSGLE-SHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAG 217
Query: 116 FGKHGFVEDCMFLFCELVRSEVA---LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-G 171
F ++ F E+ LF +++ + T +S + V L +G+++H V++
Sbjct: 218 FSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRME 277
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
++ V NSL++ Y + + AE +F++++ RD+VSWN II A + + KALEL+
Sbjct: 278 LVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFS 337
Query: 232 R-MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAK 289
+S++ + P+ T V V+ +CA + N + K IH +I++ L D VG+AL+ FYAK
Sbjct: 338 EFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAK 397
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHV 348
C+ + A F IS K+++SWNA++ + T + LL +L+ G RP+ T +
Sbjct: 398 CNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTI 457
Query: 349 LRSSLAF----QLLQLHCLIIRMGYENYEY--VLGS-LMTSYAKSGLISDALAFVTALNI 401
++ A ++ + H IR G + LG+ ++ +YAK G + A+ +L+
Sbjct: 458 IQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSE 517
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
R VV N + Y + +++ + + + D+ +WN+++ A N + L LF
Sbjct: 518 KRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHE 577
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
++ + PD T +S+L AC+ + ++ + HG + + +D + IDMY KCG
Sbjct: 578 LQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRA--CFNDVRLNGAFIDMYSKCG 635
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
S+ + K+F ++++ +TA++ ++G + AL F M LG KPD V + AVL
Sbjct: 636 SVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLF 695
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC H GLV EG ++F + + +G +P M+ Y CVVDLL R G +K+A +T MP NA
Sbjct: 696 ACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANA 755
Query: 642 LIWRTFLEGCQ 652
IW T L C+
Sbjct: 756 NIWGTLLGACR 766
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 166/589 (28%), Positives = 277/589 (47%), Gaps = 34/589 (5%)
Query: 23 EDALRMFLYMI--NRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAFVG 78
++AL +FL + + G++P LL SC +++ + G+ L LK G +
Sbjct: 19 DEALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLC- 77
Query: 79 TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS-IFGKHGFVEDCMFLFCELVRSEV 137
LL LY + G LD +F +M ++ V WN ++S + G + M LF +
Sbjct: 78 KGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNE 137
Query: 138 ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS-AE 196
A S + ++ + + G+ +H VIK+G + L N+L++MY +C + S A
Sbjct: 138 AKPNSVTIAIVLPVCARLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAY 197
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
F +E +DVVSWN +I +E++ +A +L+ M + PN T ++ CA L+
Sbjct: 198 AAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLE 257
Query: 257 NSI---LGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
+ GK +H V++ L DV V ++L+ FY + +E A F + ++++VSWN
Sbjct: 258 ENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWN 317
Query: 313 ALILGYASKSS-PTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIR 366
A+I GYAS ++ L E + L +P+ T VL + LQ +H IIR
Sbjct: 318 AIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIR 377
Query: 367 M-GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA-VVPANIIAGIYNRTGQYNET 424
G V +L++ YAK AL T L I R ++ N I + +G
Sbjct: 378 HPGLREDTSVGNALLSFYAKCNYTQAALQ--TFLMISRKDLISWNAILDAFTESGCETHL 435
Query: 425 VKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKY-MRAARIYPDNYTFV--SL 477
V LL + RPD ++ +I A K+V E Y +R + D + +
Sbjct: 436 VNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGM 495
Query: 478 LSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
L A +K N+ ++ G L +K +++ CN +I Y S + IFN M++
Sbjct: 496 LDAYAKCGNMKYAVNIFGSLSEKRNVVT-----CNSMISGYVNSSSHDDAYAIFNTMSET 550
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
++ TW ++ N F +AL F E++ G KPD V ++++L AC H
Sbjct: 551 DLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAH 599
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 452 YKEVLELF-KYMRAARIY-PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
+ E L LF + +R + Y P+ +LL +C + + GS LHG K +S + +
Sbjct: 18 HDEALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQS-L 76
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL-GLNGFAQRALEKFREMEFLG 568
C L+++Y K G++ K+F EM R+ + W ++S L G + FR M +
Sbjct: 77 CKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVN 136
Query: 569 -FKPDRVALIAVLTACR----------HGGLVREGME 594
KP+ V + VL C H +++ G+E
Sbjct: 137 EAKPNSVTIAIVLPVCARLREDAGKSVHSYVIKSGLE 173
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 199/634 (31%), Positives = 326/634 (51%), Gaps = 37/634 (5%)
Query: 24 DALRMFLYMINRGFEPTQFTF----GGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGT 79
+ALR++ M+ P TF + + +G +L AS L+ G AD F G
Sbjct: 100 EALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRG-HLADVFTGN 158
Query: 80 ALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVAL 139
L+ Y G + VF++MP + +V+WNS+VS F +G D ++RS L
Sbjct: 159 TLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPL 218
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
+S V V+ EQ+ +FG IH L +K G + + +AN+LV+MY + + ++ ++F
Sbjct: 219 NVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVF 278
Query: 200 KDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
+ ++ VSWN+ IG + +G L ++ +MS V P T ++ + L +
Sbjct: 279 DGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFD 338
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
LG+ +H IK A++ D+FV ++LVD YAK +LE A F ++ ++N+VSWNA+I
Sbjct: 339 LGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLV 398
Query: 320 SKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS 378
+ T F L+ +Q G PN T +VL + L +MG + + + +
Sbjct: 399 QNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASL-------KMGKQIHAWSI-- 449
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
+ GL+ D + +N + +Y++ GQ + + + E+ D VS
Sbjct: 450 ------RRGLMFD-------------LFISNALIDMYSKCGQLSLARNIFERSEKDD-VS 489
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
+N +I + + E L LFK MR+ I D +F+ LSAC+ L G +H ++
Sbjct: 490 YNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLV 549
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
+ ++S F+ N L+D+Y K G + ++ KIFN++T ++V +W +I G++G A
Sbjct: 550 R-RLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAF 608
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDL 618
E F M+ G D V+ IAVL AC HGGLV +G + F +M + +EP+ HY C+VDL
Sbjct: 609 ELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQM-VAQNIEPQQMHYACMVDL 667
Query: 619 LVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L R G L + +II MPFP N+ +W L C+
Sbjct: 668 LGRAGQLSKCAEIIRDMPFPANSDVWGALLGACR 701
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 160/587 (27%), Positives = 275/587 (46%), Gaps = 68/587 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--G 58
MP+R+VVS+NS++SA+ G DA R + M+ GF + ++ E G
Sbjct: 180 MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 239
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A +K GL + AL+ +YG+ G ++ + VF+ M ++ V+WNS + F
Sbjct: 240 LSIHALAVKVGLNTM-VNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLN 298
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
GF D + +F ++ V + ++ L + G ++HG IK D ++ V
Sbjct: 299 AGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFV 358
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
ANSLV+MY + + A +F+ ++ R+VVSWN +I L ++ +A L M
Sbjct: 359 ANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGE 418
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T V V+ +CA + + +GK IHA I+ L D+F+ +AL+D Y+KC L A
Sbjct: 419 CPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARN 478
Query: 299 CFSEISNKNIVSWNALILGYASKSSP---TSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F E S K+ VS+N LILGY+ SP S+ L ++ +G + +F L +
Sbjct: 479 IF-ERSEKDDVSYNTLILGYS--QSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNL 535
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ ++HC+++R + ++ SL+ Y K G++ VTA
Sbjct: 536 SVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGML------VTA------------- 576
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
K+ +++ + D+ SWN +I +G ELF+ M+ + D+
Sbjct: 577 -------------SKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDH 623
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM---------LIDMYGKCGS 522
+++++L+ACS GL+ K + S N+ ++D+ G+ G
Sbjct: 624 VSYIAVLAACSH----------GGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQ 673
Query: 523 IGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
+ +I +M N W AL+ A ++G AQ A E E++
Sbjct: 674 LSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELK 720
>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 199/671 (29%), Positives = 354/671 (52%), Gaps = 23/671 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVE-DALRMF--LYMINRGFEPTQFTFGGLLS-CDSLNPV 56
M R+ V +N ++S + E + +R+F ++M+N +P T +L C L
Sbjct: 39 MDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEA-KPNSVTIAIVLPVCARLRED 97
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCL-DEVVSVFEDMPRKSLVTWNSIVSI 115
G + + V+K+GL + G AL+ +Y + G + + + F + K +V+WN++++
Sbjct: 98 AGKSVHSYVIKSGLE-SHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAG 156
Query: 116 FGKHGFVEDCMFLFCELVRSEVA---LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-G 171
F ++ F E+ LF +++ + T +S + V L +G+++H V++
Sbjct: 157 FSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRME 216
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
++ V NSL++ Y + + AE +F++++ RD+VSWN II A + + KALEL+
Sbjct: 217 LVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFS 276
Query: 232 R-MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAK 289
+S++ + P+ T V V+ +CA + N + K IH +I++ L D VG+AL+ FYAK
Sbjct: 277 EFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAK 336
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHV 348
C+ + A F IS K+++SWNA++ + T + LL +L+ G RP+ T +
Sbjct: 337 CNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTI 396
Query: 349 LRSSLAF----QLLQLHCLIIRMGYENYEY--VLGS-LMTSYAKSGLISDALAFVTALNI 401
++ A ++ + H IR G + LG+ ++ +YAK G + A+ +L+
Sbjct: 397 IQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSE 456
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
R VV N + Y + +++ + + + D+ +WN+++ A N + L LF
Sbjct: 457 KRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHE 516
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
++ + PD T +S+L AC+ + ++ + HG + + +D + IDMY KCG
Sbjct: 517 LQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACF--NDVRLNGAFIDMYSKCG 574
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
S+ + K+F ++++ +TA++ ++G + AL F M LG KPD V + AVL
Sbjct: 575 SVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLF 634
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC H GLV EG ++F + + +G +P M+ Y CVVDLL R G +K+A +T MP NA
Sbjct: 635 ACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANA 694
Query: 642 LIWRTFLEGCQ 652
IW T L C+
Sbjct: 695 NIWGTLLGACR 705
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 151/528 (28%), Positives = 249/528 (47%), Gaps = 29/528 (5%)
Query: 80 ALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS-IFGKHGFVEDCMFLFCELVRSEVA 138
LL LY + G LD +F +M ++ V WN ++S + G + M LF + A
Sbjct: 18 GLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEA 77
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS-AEK 197
S + ++ + + G+ +H VIK+G + L N+L++MY +C + S A
Sbjct: 78 KPNSVTIAIVLPVCARLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYA 137
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQN 257
F +E +DVVSWN +I +E++ +A +L+ M + PN T ++ CA L+
Sbjct: 138 AFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEE 197
Query: 258 SI---LGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+ GK +H V++ L DV V ++L+ FY + +E A F + ++++VSWNA
Sbjct: 198 NAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNA 257
Query: 314 LILGYASKSS-PTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRM 367
+I GYAS ++ L E + L +P+ T VL + LQ +H IIR
Sbjct: 258 IIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRH 317
Query: 368 -GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA-VVPANIIAGIYNRTGQYNETV 425
G V +L++ YAK AL T L I R ++ N I + +G V
Sbjct: 318 PGLREDTSVGNALLSFYAKCNYTQAALQ--TFLMISRKDLISWNAILDAFTESGCETHLV 375
Query: 426 KLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKY-MRAARIYPDNYTFV--SLL 478
LL + RPD ++ +I A K+V E Y +R + D + +L
Sbjct: 376 NLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGML 435
Query: 479 SACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
A +K N+ ++ G L +K +++ CN +I Y S + IFN M++ +
Sbjct: 436 DAYAKCGNMKYAVNIFGSLSEKRNVVT-----CNSMISGYVNSSSHDDAYAIFNTMSETD 490
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ TW ++ N F +AL F E++ G KPD V ++++L AC H
Sbjct: 491 LTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAH 538
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL-GLNGFAQRALEKFREMEFL 567
+C L+++Y K G++ K+F EM R+ + W ++S L G + FR M +
Sbjct: 15 LCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMV 74
Query: 568 G-FKPDRVALIAVLTACR----------HGGLVREGME 594
KP+ V + VL C H +++ G+E
Sbjct: 75 NEAKPNSVTIAIVLPVCARLREDAGKSVHSYVIKSGLE 112
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 197/668 (29%), Positives = 345/668 (51%), Gaps = 52/668 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFL-YMINRGFEPTQFTFGGLL-SCDSLNPVEG 58
MP+RN+VS+++++SA + G E++L +FL + R P ++ + +C L+ G
Sbjct: 105 MPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG-RG 163
Query: 59 A----QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
QLQ+ ++K+G F D +VGT L+ Y + G +D VF+ +P KS VTW +++S
Sbjct: 164 RWMVFQLQSFLVKSG-FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMIS 222
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
K G + LF +L+ V V+ S LE G+QIH +++ G +
Sbjct: 223 GCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEM 282
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ + N L++ Y +C + +A K+F + ++++SW T++ ++ +A+EL+ MS
Sbjct: 283 DASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMS 342
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ P+ ++ SCA L G +HA IK L D +V ++L+D YAKCD L
Sbjct: 343 KFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLT 402
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ----LGYRPNEFTFSHVLR 350
A F + ++V +NA+I GY+ + + + + + RP+ TF +LR
Sbjct: 403 DARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLR 462
Query: 351 SSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+S + L Q+H L+ + G + +A S LI
Sbjct: 463 ASASLTSLGLSKQIHGLMFKYGLN---------LDIFAGSALID---------------- 497
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
+Y+ ++ + +++ D+V WN + A + +E L LF ++ +R
Sbjct: 498 -------VYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSR 550
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLH-GLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
PD +TF ++++A L ++ LG H L+K+ + + ++ N L+DMY KCGS
Sbjct: 551 ERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRG--LECNPYITNALLDMYAKCGSPED 608
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ K F+ R+V+ W ++IS+ +G ++AL+ +M G +P+ + + VL+AC H
Sbjct: 609 AHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSH 668
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GLV +G++ FE M R +G+EPE +HY C+V LL R G L +A ++I MP P A++WR
Sbjct: 669 AGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWR 727
Query: 646 TFLEGCQR 653
+ L GC +
Sbjct: 728 SLLSGCAK 735
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 153/568 (26%), Positives = 263/568 (46%), Gaps = 45/568 (7%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D ++ L+ LY R G + VFE MP ++LV+W+++VS HG E+ + +F E
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 134 RSEVALTE----SSFVGVIHGLSNE-QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
R+ SSF+ GL + + F Q+ ++K+GFD ++ V L++ Y +
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLDGRGRWMVF--QLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 189 CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYV 248
I A +F + + V+W T+I + +L+L+ ++ D V P+ V
Sbjct: 196 DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTV 255
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+++C+ L GK IHA +++ LE D + + L+D Y KC + AH F+ + NKNI
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNI 315
Query: 309 VSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCL 363
+SW L+ GY + ++ L + + G +P+ + S +L S + L Q+H
Sbjct: 316 ISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAY 375
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
I+ N YV SL+ YAK ++DA V+ +I G Y+R G
Sbjct: 376 TIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG-YSRLG---- 430
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
W + E L +F+ MR I P TFVSLL A +
Sbjct: 431 -------------TQWEL-----------HEALNIFRDMRFRLIRPSLLTFVSLLRASAS 466
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
L +L L +HGL+ K ++ D F + LID+Y C + S +F+EM ++++ W +
Sbjct: 467 LTSLGLSKQIHGLMFKYG-LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNS 525
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF-ERMNRS 602
+ + + AL F E++ +PD ++TA + V+ G E + + R
Sbjct: 526 MFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRG 585
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
P + + ++D+ + G ++A K
Sbjct: 586 LECNPYIT--NALLDMYAKCGSPEDAHK 611
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 217/452 (48%), Gaps = 48/452 (10%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
F ++ +++ L + +HG +I G + + ++N L+N+Y + G+ A K+F+ +
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 204 IRDVVSWNTIIGALAESENFGKALELYL---RMSVDIVFPNQTTFVYVINSCAGL--QNS 258
R++VSW+T++ A + ++L ++L R D PN+ I +C+GL +
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDS--PNEYILSSFIQACSGLDGRGR 164
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
+ + + ++K+ + DV+VG+ L+DFY K N++ A L F + K+ V+W +I G
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 319 ASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYE 373
S S+ L +L++ P+ + S VL + L Q+H I+R G E
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
++ L+ SY K G R + + G+ N+
Sbjct: 285 SLMNVLIDSYVKCG---------------RVIAAHKLFNGMPNK---------------- 313
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
+I+SW +++ N +KE +ELF M + PD Y S+L++C+ L L G+ +
Sbjct: 314 -NIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV 372
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI---SALGL 550
H K + +D++V N LIDMY KC + + K+F+ +V+ + A+I S LG
Sbjct: 373 HAYTIKAN-LGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGT 431
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
AL FR+M F +P + +++L A
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 80/153 (52%), Gaps = 13/153 (8%)
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
DT++ N+LI++Y + G + + K+F +M +RN+++W+ ++SA +G + +L F +E
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVF--LE 135
Query: 566 FLGFK---PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV----VDL 618
F + P+ L + + AC GL G + ++ +S+ V+ D V +D
Sbjct: 136 FWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQL-QSFLVKSGFDRDVYVGTLLIDF 192
Query: 619 LVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
++ G++ A + +P + + W T + GC
Sbjct: 193 YLKDGNIDYARLVFDALP-EKSTVTWTTMISGC 224
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 199/643 (30%), Positives = 329/643 (51%), Gaps = 40/643 (6%)
Query: 20 GYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAFV 77
G + A M + P T+ LL SC + G + ++++GL D+ V
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLEL-DSVV 63
Query: 78 GTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
L+ LY + G + +FE M ++ LV+W+++VS F + ++ F +++
Sbjct: 64 LNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 123
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELLVANSLVNMYFQCAG-IWS 194
E F VI SN GE I+G V+K G+ + ++ V L++M+ + +G + S
Sbjct: 124 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 183
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A K+F + R++V+W +I A+ A++L+L M + P++ T+ V+++C
Sbjct: 184 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 243
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC---DNLEGAHLCFSEISNKNIVSW 311
L LGK +H++VI+ L DV VG +LVD YAKC +++ + F ++ N++SW
Sbjct: 244 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 303
Query: 312 NALILGY--ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGY 369
A+I Y + + +I L +++ RPN F+FS VL++
Sbjct: 304 TAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC----------------- 346
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
G+L Y + S + L I N + +Y R+G+ + K
Sbjct: 347 -------GNLSDPYTGEQVYS----YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFD 395
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
L ++VS+N ++ A N +E LF + I +TF SLLS + + +
Sbjct: 396 ILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGK 455
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G +HG + K S+ +CN LI MY +CG+I ++ ++FNEM DRNVI+WT++I+
Sbjct: 456 GEQIHGRLLKGGY-KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 514
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
+GFA RALE F +M G KP+ + +AVL+AC H G++ EG + F M + +G+ P M
Sbjct: 515 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 574
Query: 610 DHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+HY C+VDLL R G L EA + I +MP +AL+WRT L C+
Sbjct: 575 EHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACR 617
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 158/632 (25%), Positives = 286/632 (45%), Gaps = 99/632 (15%)
Query: 5 NVVSFNSIISAYSRCGYVE--------------------------------DALRMFLYM 32
+ V N++IS YS+CG E A+ FL M
Sbjct: 60 DSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDM 119
Query: 33 INRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGR-HG 89
+ GF P ++ F ++ +C + N G + V+K G AD VG L+ ++ + G
Sbjct: 120 LELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSG 179
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH 149
L VF+ MP ++LVTW +++ F + G D + LF ++ S ++ V+
Sbjct: 180 DLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLS 239
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE---KMFKDVEIRD 206
+ L G+Q+H VI+ G ++ V SLV+MY +CA S + K+F+ + +
Sbjct: 240 ACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHN 299
Query: 207 VVSWNTIIGALAESENFGK-ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
V+SW II A +S K A+EL+ +M + PN +F V+ +C L + G+ ++
Sbjct: 300 VMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 359
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT 325
+ +K + VG++L+ YA+ +E A F + KN+VS+NA++ GYA
Sbjct: 360 SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 419
Query: 326 SIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLM 380
FLL E+ G + FTF+ +L + + + Q+H +++ GY++ + + +L+
Sbjct: 420 EAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALI 479
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
+ Y++ G I A ++ +++E +++SW
Sbjct: 480 SMYSRCGNIEAAF--------------------------------QVFNEMEDRNVISWT 507
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL------- 493
+I A +G LE+F M P+ T+V++LSACS + ++ G
Sbjct: 508 SMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKE 567
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG 552
HG++ + E + C ++D+ G+ G + +++ N M + + W L+ A ++G
Sbjct: 568 HGIVPRME-----HYAC--MVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG 620
Query: 553 ---FAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ A E E E PD A +L+
Sbjct: 621 NTELGRHAAEMILEQE-----PDDPAAYILLS 647
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 147/584 (25%), Positives = 274/584 (46%), Gaps = 50/584 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
R++VS+++++S ++ A+ FL M+ GF P ++ F ++ +C + N G +
Sbjct: 91 RDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEII 150
Query: 62 QASVLKNGLFCADAFVGTALLGLYGR-HGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
V+K G AD VG L+ ++ + G L VF+ MP ++LVTW +++ F + G
Sbjct: 151 YGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLG 210
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
D + LF ++ S ++ V+ + L G+Q+H VI+ G ++ V
Sbjct: 211 CARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGC 270
Query: 181 SLVNMYFQCAGIWSAE---KMFKDVEIRDVVSWNTIIGALAESENFGK-ALELYLRMSVD 236
SLV+MY +CA S + K+F+ + +V+SW II A +S K A+EL+ +M
Sbjct: 271 SLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISG 330
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ PN +F V+ +C L + G+ +++ +K + VG++L+ YA+ +E A
Sbjct: 331 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 390
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAF 355
F + KN+VS+NA++ GYA FLL E+ G + FTF+ +L + +
Sbjct: 391 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 450
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ Q+H +++ GY++ + + +L++ Y++ G I A + + ++I
Sbjct: 451 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 510
Query: 412 AGIYNR---TGQYNETVKLLSQLERPDIVSWNIVIAACAH-----------NGDYKE--- 454
G T K+L +P+ +++ V++AC+H N YKE
Sbjct: 511 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 570
Query: 455 -------------------VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
++E +++ + + D + +LL AC N LG
Sbjct: 571 VPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAE 630
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
+I + E ++ +L +++ G VKI M +RN+I
Sbjct: 631 MILEQEPDDPAAYI--LLSNLHASAGQWKDVVKIRKSMKERNLI 672
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 252/485 (51%), Gaps = 30/485 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+RN+V++ +I+ +++ G DA+ +FL M G+ P +FT+ +LS C L + G
Sbjct: 191 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 250
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGR---HGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
QL + V++ GL D VG +L+ +Y + G +D+ VFE MP ++++W +I++
Sbjct: 251 KQLHSRVIRLGL-ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA 309
Query: 116 FGKHGFVE-DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + G + + + LFC+++ + SF V+ N D GEQ++ +K G
Sbjct: 310 YVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIAS 369
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V NSL++MY + + A K F + +++VS+N I+ A++ +A L+ ++
Sbjct: 370 VNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIA 429
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ + TF +++ A + G+ IH +++K + + + +AL+ Y++C N+E
Sbjct: 430 DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIE 489
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F+E+ ++N++SW ++I G+A T ++ + ++L+ G +PNE T+ VL +
Sbjct: 490 AAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSAC- 548
Query: 354 AFQLLQLHCLIIRMGYENY-----EYVLGSLMTSYA-------KSGLISDALAFVTALNI 401
H +I G +++ E+ + M YA +SGL+ +A+ F+ ++ +
Sbjct: 549 ------SHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 602
Query: 402 PRAVVPANIIAG---IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
+ + G ++ T +++ + E D ++ ++ A G +K+V+++
Sbjct: 603 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 662
Query: 459 FKYMR 463
K M+
Sbjct: 663 RKSMK 667
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 200/664 (30%), Positives = 341/664 (51%), Gaps = 51/664 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQL 61
R+ S+ +II+AY+ G + A+ MF M G TF +L +C L + +G +
Sbjct: 91 RDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A ++++GL + + LL +YG GC+ + +FE M R LV+WN+ ++ + G
Sbjct: 151 HAWIVESGLE-GKSVLANLLLHIYGSCGCVASAMLLFERMER-DLVSWNAAIAANAQSGD 208
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ + LF R ++ + + ++ LS + IH +V ++G + L+V+ +
Sbjct: 209 LDMALELF---QRMQLEGVRPARITLVITLSVCAKIRQARAIHSIVRESGLEQTLVVSTA 265
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L + Y + + A+++F RDVVSWN ++GA A+ + +A L+ RM + + P+
Sbjct: 266 LASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPS 325
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ T V C+ L+ G+ IHA ++ L+ D+ +G+AL+D Y +C + E A F
Sbjct: 326 KVTLVNASTGCSSLR---FGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFE 382
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA------ 354
I N VSWN +I G + K L + +QL G P T+ ++L + +
Sbjct: 383 GIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEAR 441
Query: 355 --FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ +LH I+ GY + + +++ YA G I +A A + R +
Sbjct: 442 AMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAA-----SFQRGAME----- 491
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+R D+VSWN +I++ + +G K L F+ M + P+
Sbjct: 492 -------------------DRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQI 532
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T V++L AC+ L G +H ++ + + S+ FV L MYG+CGS+ S+ +IF +
Sbjct: 533 TCVAVLDACAGAAALTEGVIVHDHLRHSGM-ESNVFVATALASMYGRCGSLESAREIFEK 591
Query: 533 MT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ +R+V+ + A+I+A NG A AL+ F M+ G +PD + ++VL+AC HGGL E
Sbjct: 592 VAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADE 651
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G E+F M +SYG+ P DHY C VD+L R G L +AE++I M P L+W+T L C
Sbjct: 652 GWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGAC 711
Query: 652 QRCR 655
++ R
Sbjct: 712 RKYR 715
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/600 (27%), Positives = 291/600 (48%), Gaps = 49/600 (8%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G ++ A ++ GL + +G LL LY + L +V VF + + +W +I++ +
Sbjct: 47 QGRRIHARIVSLGL---EEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAY 103
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+HG + +++F + + V +F+ V+ + DL G IH ++++G + +
Sbjct: 104 TEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKS 163
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++AN L+++Y C + SA +F+ +E RD+VSWN I A A+S + ALEL+ RM ++
Sbjct: 164 VLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELFQRMQLE 222
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P + T V ++ CA ++ + ++IH+ V ++ LE + V +AL YA+ +L+ A
Sbjct: 223 GVRPARITLVITLSVCAKIRQA---RAIHSIVRESGLEQTLVVSTALASAYARLGHLDQA 279
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAF 355
F + +++VSWNA++ YA + LL +L G P++ T
Sbjct: 280 KEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTL---------- 329
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
V S S + G + A A L+ R +V N + +Y
Sbjct: 330 -------------------VNASTGCSSLRFGRMIHACALEKGLD--RDIVLGNALLDMY 368
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
R G E L + + VSWN +IA + G K LELF+ M+ + P T++
Sbjct: 369 TRCGSPEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYL 427
Query: 476 SLLSACS----KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+LL A + + +A G LH I +S+ + ++ MY CG+I + F
Sbjct: 428 NLLEAVASNPEEARAMAEGRKLHSRIVSCG-YASEPAIGTAVVKMYASCGAIDEAAASFQ 486
Query: 532 E--MTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
M DR +V++W A+IS+L +G +RAL FR M+ G P+++ +AVL AC
Sbjct: 487 RGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAA 546
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ EG+ + + + R G+E + + + R G L+ A +I + + +I+ +
Sbjct: 547 LTEGVIVHDHL-RHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMI 605
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 223/503 (44%), Gaps = 53/503 (10%)
Query: 135 SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
S A + V ++ +++ L G +IH ++ G + EL N L+ +Y +C +
Sbjct: 23 SSGATRPAHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGD 80
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
E++F +E+RD SW TII A E +A+ ++ RM + V + TF+ V+ +CA
Sbjct: 81 VEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACAR 140
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
L + G+SIHA ++++ LE + + L+ Y C + A L F + +++VSWNA
Sbjct: 141 LGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAA 199
Query: 315 ILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ---LHCLIIRMGYE 370
I A L + +QL G RP T V+ S+ ++ Q +H ++ G E
Sbjct: 200 IAANAQSGDLDMALELFQRMQLEGVRPARITL--VITLSVCAKIRQARAIHSIVRESGLE 257
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+V + +A Y R G ++ ++ +
Sbjct: 258 Q--------------------------------TLVVSTALASAYARLGHLDQAKEVFDR 285
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
D+VSWN ++ A A +G E LF M I P T V+ + CS +L G
Sbjct: 286 AAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCS---SLRFG 342
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+H + + + D + N L+DMY +CGS + +F E N ++W +I+
Sbjct: 343 RMIHACALE-KGLDRDIVLGNALLDMYTRCGSPEEARHLF-EGIPGNAVSWNTMIAGSSQ 400
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTAC----RHGGLVREGMELFERM-NRSYGV 605
G +RALE F+ M+ G P R + +L A + EG +L R+ + Y
Sbjct: 401 KGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYAS 460
Query: 606 EPEMDHYHCVVDLLVRYGHLKEA 628
EP + VV + G + EA
Sbjct: 461 EPAIG--TAVVKMYASCGAIDEA 481
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 230/455 (50%), Gaps = 42/455 (9%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEGAQL 61
+R+VVS+N+++ AY++ G++ +A +F M++ G P++ T C SL G +
Sbjct: 288 ERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLRF--GRMI 345
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A L+ GL D +G ALL +Y R G +E +FE +P + V+WN++++ + G
Sbjct: 346 HACALEKGLD-RDIVLGNALLDMYTRCGSPEEARHLFEGIPGNA-VSWNTMIAGSSQKGQ 403
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGL-SNEQD---LEFGEQIHGLVIKNGFDYELL 177
++ + LF + +A ++++ ++ + SN ++ + G ++H ++ G+ E
Sbjct: 404 MKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPA 463
Query: 178 VANSLVNMYFQCAGIWSAEKMFKD--VEIR-DVVSWNTIIGALAESENFGKALELYLRMS 234
+ ++V MY C I A F+ +E R DVVSWN II +L++ + +AL + RM
Sbjct: 464 IGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMD 523
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ V PNQ T V V+++CAG G +H + + +E +VFV +AL Y +C +LE
Sbjct: 524 LHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLE 583
Query: 295 GAHLCFSEIS-NKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A F +++ +++V +NA+I Y+ + ++ L + Q G RP+E +F VL +
Sbjct: 584 SAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSA- 642
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
C + E +E + S+ SY G+ + A++
Sbjct: 643 ---------CSHGGLADEGWE-IFRSMRQSY---GIAPSEDHYACAVD------------ 677
Query: 413 GIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
+ R G + +L+ ++ +P ++ W ++ AC
Sbjct: 678 -VLGRAGWLADAEELIRCMDVKPTVLVWKTLLGAC 711
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 191/652 (29%), Positives = 350/652 (53%), Gaps = 42/652 (6%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ-LQ 62
++ +NSIIS++ R G + AL + M+ G P TF L+ +C +L +G + L
Sbjct: 98 SIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLS 157
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+V G+ C + FV ++L+ Y +G +D +F+ + +K V WN +++ + K G
Sbjct: 158 DTVSSLGMDC-NEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGAS 216
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ + F + +++ +F V+ +++ ++ G Q+HGLV+ +G D+E + NSL
Sbjct: 217 DSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSL 276
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
++MY +C A K+F+ + D V+WN +I +S ++L + M V P+
Sbjct: 277 LSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDA 336
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
TF ++ S + +N + IH ++++++ D+F+ SAL+D Y KC + A FS+
Sbjct: 337 ITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQ 396
Query: 303 ISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLR---SSLAFQL- 357
++ ++V + A+I GY + ++ + L+++ PNE T +L LA +L
Sbjct: 397 CNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLG 456
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+LH II+ G++N NI AV+ +Y +
Sbjct: 457 RELHGFIIKKGFDN--------------------------RCNIGCAVI------DMYAK 484
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G+ N ++ +L + DIVSWN +I CA + + +++F+ M + I D + +
Sbjct: 485 CGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAA 544
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
LSAC+ L + + G ++HG + K + + D + + LIDMY KCG++ +++ +F+ M ++N
Sbjct: 545 LSACANLPSESFGKAIHGFMIKHSL-ALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKN 603
Query: 538 VITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+++W ++I+A G +G + +L F EM E G +PD++ + +++ C H G V EG+ F
Sbjct: 604 IVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFF 663
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
M + YG++P+ +HY CVVDL R G L EA + + +MPFPP+A +W T L
Sbjct: 664 RSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLL 715
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 156/613 (25%), Positives = 276/613 (45%), Gaps = 71/613 (11%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK--SLVTWNSIVS 114
+G Q+ A V+ N + D++ +LG+Y G +F + + S+ WNSI+S
Sbjct: 49 QGKQVHAFVIVNRI-SGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNSIIS 107
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG---LSNEQDLEFGEQIHGLVIKNG 171
F + G + + + +++ V+ S+F ++ L N + +EF + V G
Sbjct: 108 SFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEF---LSDTVSSLG 164
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
D VA+SL+ Y + I A K+F V +D V WN ++ A+ ++ +
Sbjct: 165 MDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFS 224
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
M +D + PN TF V++ CA LG +H V+ + L+ + + ++L+ Y+KC
Sbjct: 225 LMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCG 284
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLR 350
+ A F +S + V+WN +I GY S S+ E++ G P+ TFS +L
Sbjct: 285 RFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLP 344
Query: 351 SSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
S F+ L Q+HC I+R ++ +L+ +Y K +S A
Sbjct: 345 SVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ------------- 391
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
K+ SQ D+V + +I+ HNG + LE+F+++ +
Sbjct: 392 -------------------KIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVK 432
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
I P+ T VS+L L L LG LHG I K + C +IDMY KCG + +
Sbjct: 433 ISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGC-AVIDMYAKCGRMNLA 491
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-- 584
+IF ++ R++++W ++I+ + A++ FR+M G D V++ A L+AC
Sbjct: 492 YEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANL 551
Query: 585 ---------HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
HG +++ + L ++ ++D+ + G+LK A + TM
Sbjct: 552 PSESFGKAIHGFMIKHSLAL------------DVYSESTLIDMYAKCGNLKAAMNVFDTM 599
Query: 636 PFPPNALIWRTFL 648
N + W + +
Sbjct: 600 K-EKNIVSWNSII 611
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/552 (23%), Positives = 257/552 (46%), Gaps = 32/552 (5%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
++ V +N +++ Y++CG + ++ F M P TF +LS C S ++ G QL
Sbjct: 198 KDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 257
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V+ +GL + + +LL +Y + G D+ + +F M R VTWN ++S + + G
Sbjct: 258 HGLVVVSGLD-FEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGL 316
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+E+ + F E++ S V +F ++ +S ++LE+ QIH ++++ ++ + ++
Sbjct: 317 MEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSA 376
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L++ YF+C G+ A+K+F DVV + +I + ALE++ + + PN
Sbjct: 377 LIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPN 436
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ T V ++ GL LG+ +H +IK + +G A++D YAKC + A+ F
Sbjct: 437 EITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFG 496
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
+S ++IVSWN++I A +P++ + Q+G S + F + +
Sbjct: 497 RLSKRDIVSWNSMITRCAQSDNPSAAIDIFR--QMGV------------SGICFDCVSIS 542
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
+ E S+ K+ F+ ++ V + + +Y + G
Sbjct: 543 AALSACANLPSE--------SFGKA-----IHGFMIKHSLALDVYSESTLIDMYAKCGNL 589
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSA 480
+ + ++ +IVSWN +IAA ++G K+ L LF M + PD TF+ ++S
Sbjct: 590 KAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISL 649
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVI 539
C + ++ G + + I ++D++G+ G + + + M +
Sbjct: 650 CCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAG 709
Query: 540 TWTALISALGLN 551
W L+ A L+
Sbjct: 710 VWGTLLGASRLH 721
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 243/485 (50%), Gaps = 25/485 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEG-- 58
M + V++N +IS Y + G +E++L F MI+ G P TF LL S++ E
Sbjct: 296 MSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLP--SVSKFENLE 353
Query: 59 --AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
Q+ ++++ + D F+ +AL+ Y + + +F +V + +++S +
Sbjct: 354 YCRQIHCYIMRHSI-SLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGY 412
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+G D + +F LV+ +++ E + V ++ + L+ G ++HG +IK GFD
Sbjct: 413 LHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRC 472
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ ++++MY +C + A ++F + RD+VSWN++I A+S+N A++++ +M V
Sbjct: 473 NIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS 532
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ + + +++CA L + GK+IH +IK++L DV+ S L+D YAKC NL+ A
Sbjct: 533 GICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAA 592
Query: 297 HLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
F + KNIVSWN++I Y + S+ L E+++ G RP++ TF ++
Sbjct: 593 MNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCH 652
Query: 355 FQLLQLHCLIIRMGYENY-----EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ R ++Y + ++ + ++G +S+A V ++ P P
Sbjct: 653 VGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFP----PDA 708
Query: 410 IIAGIYNRTGQYNETVKL--LSQLERPDIVSWN-----IVIAACAHNGDYKEVLELFKYM 462
+ G + ++ V+L ++ D+ WN ++ A A+ G+++ V ++ M
Sbjct: 709 GVWGTLLGASRLHKNVELAKVASSRLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLM 768
Query: 463 RAARI 467
+ +
Sbjct: 769 KEREV 773
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 138/518 (26%), Positives = 236/518 (45%), Gaps = 50/518 (9%)
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK--DVEI 204
++ SN L G+Q+H VI N + ++ MY C + KMF D +
Sbjct: 37 LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL 96
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+ WN+II + +AL Y +M V P+ +TF ++ +C L+N + +
Sbjct: 97 SSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFL 156
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
V ++C+ FV S+L+ Y + ++ A F + K+ V WN ++ GYA +
Sbjct: 157 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGAS 216
Query: 325 TSI---FLLIELLQLGYRPNEFTFSHVLR---SSLAFQL-LQLHCLIIRMGYENYEYVLG 377
S+ F L+ + Q+ PN TF VL S L L +QLH L++ G + +
Sbjct: 217 DSVIKGFSLMRMDQIS--PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKN 274
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
SL++ Y+K G++++ +KL + R D V
Sbjct: 275 SLLSMYSK--------------------------------CGRFDDAIKLFRMMSRADTV 302
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
+WN +I+ +G +E L F M ++ + PD TF SLL + SK NL +H I
Sbjct: 303 TWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYI 362
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
+ IS D F+ + LID Y KC + + KIF++ +V+ +TA+IS NG A
Sbjct: 363 MRHS-ISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDA 421
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGL--VREGMELFERMNRSYGVEPEMDHYHCV 615
LE FR + + P+ + L+++L GGL ++ G EL + + G + + V
Sbjct: 422 LEMFRWLVKVKISPNEITLVSILPVI--GGLLALKLGRELHGFIIKK-GFDNRCNIGCAV 478
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+D+ + G + A +I + + + W + + C +
Sbjct: 479 IDMYAKCGRMNLAYEIFGRLS-KRDIVSWNSMITRCAQ 515
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 191/656 (29%), Positives = 327/656 (49%), Gaps = 41/656 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
R+ VS+ +++S Y++ G E+A+R++ M G PT + +LS C + G +
Sbjct: 106 RDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLI 165
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V K G F ++ FVG AL+ LY R VF DM VT+N+++S + G
Sbjct: 166 HVQVYKQGFF-SETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGH 224
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + +F E+ S ++ + ++ S DL G+Q+H ++K G + ++ S
Sbjct: 225 GDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGS 284
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+++Y + I A ++F + +VV WN ++ A + ++ K+ +++ RM V PN
Sbjct: 285 LLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPN 344
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ T+ ++ +C LG+ IH+ IKN + D++V L+D Y+K L+ A
Sbjct: 345 KFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILD 404
Query: 302 EISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
I K++VSW ++I GY ++ E+ G P+ + + + + +
Sbjct: 405 MIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQ 464
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
Q+H + GY + L+ YA+ G+ +A + A+
Sbjct: 465 GSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAI----------------- 507
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
E + ++WN +I+ A +G Y+E L++F M A + +TFVS
Sbjct: 508 ---------------EHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVS 552
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+SA + L ++ G +H + KT +S+T + N LI +YGKCGSI + F EMT R
Sbjct: 553 SISASANLADIKQGKQIHARVIKTGY-TSETEISNALISLYGKCGSIEDAKMDFFEMTKR 611
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
N ++W +I+ +G AL+ F +M+ G KP V + VLTAC H GLV EG+ F
Sbjct: 612 NEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYF 671
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ M+ +G+ P DHY CVVD+L R G L A++ + MP P ++++WRT L C+
Sbjct: 672 KSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACK 727
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/582 (25%), Positives = 280/582 (48%), Gaps = 40/582 (6%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
+G L+ LY + G + VFE++ + V+W +++S + ++G E+ + L+ E+ RS
Sbjct: 79 IGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSG 138
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
V T ++ + + + G IH V K GF E V N+L+++Y +C A+
Sbjct: 139 VVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLAD 198
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
++F D+ D V++NT+I A+ + +AL ++ M + + P+ T ++ +C+ +
Sbjct: 199 RVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVG 258
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ GK +H+ ++K + D + +L+D Y K ++E A F N+V WN +++
Sbjct: 259 DLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLV 318
Query: 317 GYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYEN 371
Y F + +L G RPN+FT+ +LR+ + Q+H L I+ G+++
Sbjct: 319 AYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQS 378
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
YV G L+ Y+K G + A ++L +
Sbjct: 379 DMYVSGVLIDMYSKYGWLDKAQ--------------------------------RILDMI 406
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
E D+VSW +IA + KE LE FK M+A I+PDN S +SAC+ + + GS
Sbjct: 407 EEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGS 466
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H + + S+D + N L+ +Y +CG + F + + ITW LIS +
Sbjct: 467 QIHARVYVSGY-SADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQS 525
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G + AL+ F +M+ G K + ++ ++A + +++G ++ R+ ++ G E +
Sbjct: 526 GLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKT-GYTSETEI 584
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ ++ L + G +++A+ M N + W T + C +
Sbjct: 585 SNALISLYGKCGSIEDAKMDFFEMT-KRNEVSWNTIITCCSQ 625
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 230/473 (48%), Gaps = 41/473 (8%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
+IH I G ++ N L+++Y + + A ++F+++ +RD VSW ++ A++
Sbjct: 63 EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNG 122
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
+A+ LY M V P ++++C + LG+ IH +V K + FVG+
Sbjct: 123 LGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGN 182
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRP 340
AL+ Y +C + A F ++ + V++N LI G+A + + +QL G P
Sbjct: 183 ALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSP 242
Query: 341 NEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVL-GSLMTSYAKSGLISDALAF 395
+ T + +L + A L QLH +++ G + +Y++ GSL+ Y KSG I +AL
Sbjct: 243 DSVTIASLLAACSAVGDLRKGKQLHSYLLKAGM-SLDYIMEGSLLDLYVKSGDIEEAL-- 299
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
++ +R ++V WN+++ A D +
Sbjct: 300 ------------------------------QIFDSGDRTNVVLWNLMLVAYGQIDDLAKS 329
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
++F M AA + P+ +T+ +L C+ + LG +H L K SD +V +LID
Sbjct: 330 FDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNG-FQSDMYVSGVLID 388
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY K G + + +I + + +++V++WT++I+ + F + ALE F+EM+ G PD +
Sbjct: 389 MYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIG 448
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
L + ++AC V +G ++ R+ S G ++ ++ +V L R G KEA
Sbjct: 449 LASAISACAGIKAVHQGSQIHARVYVS-GYSADVSIWNGLVYLYARCGISKEA 500
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M RN VS+N+II+ S+ G +AL +F M +G +P+ TF G+L+ C + VE
Sbjct: 608 MTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEG 667
Query: 60 QLQASVLKN--GLFC-ADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSI 115
+ N G+ D + ++ + GR G LD E+MP + W +++S
Sbjct: 668 LCYFKSMSNEHGIHPRPDHY--ACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSA 725
Query: 116 FGKHGFVE 123
H +E
Sbjct: 726 CKVHKNLE 733
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 199/643 (30%), Positives = 329/643 (51%), Gaps = 40/643 (6%)
Query: 20 GYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAFV 77
G + A M + P T+ LL SC + G + ++++GL D+ V
Sbjct: 23 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLEL-DSVV 81
Query: 78 GTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
L+ LY + G + +FE M ++ LV+W+++VS F + ++ F +++
Sbjct: 82 LNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 141
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELLVANSLVNMYFQCAG-IWS 194
E F VI SN GE I+G V+K G+ + ++ V L++M+ + +G + S
Sbjct: 142 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGS 201
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A K+F + R++V+W +I A+ A++L+L M + P++ T+ V+++C
Sbjct: 202 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 261
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC---DNLEGAHLCFSEISNKNIVSW 311
L LGK +H++VI+ L DV VG +LVD YAKC +++ + F ++ N++SW
Sbjct: 262 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 321
Query: 312 NALILGY--ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGY 369
A+I Y + + +I L +++ RPN F+FS VL++
Sbjct: 322 TAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC----------------- 364
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
G+L Y + S + L I N + +Y R+G+ + K
Sbjct: 365 -------GNLSDPYTGEQVYS----YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFD 413
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
L ++VS+N ++ A N +E LF + I +TF SLLS + + +
Sbjct: 414 ILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGK 473
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G +HG + K S+ +CN LI MY +CG+I ++ ++FNEM DRNVI+WT++I+
Sbjct: 474 GEQIHGRLLKGGY-KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 532
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
+GFA RALE F +M G KP+ + +AVL+AC H G++ EG + F M + +G+ P M
Sbjct: 533 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 592
Query: 610 DHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+HY C+VDLL R G L EA + I +MP +AL+WRT L C+
Sbjct: 593 EHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACR 635
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 158/632 (25%), Positives = 286/632 (45%), Gaps = 99/632 (15%)
Query: 5 NVVSFNSIISAYSRCGYVE--------------------------------DALRMFLYM 32
+ V N++IS YS+CG E A+ FL M
Sbjct: 78 DSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDM 137
Query: 33 INRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGR-HG 89
+ GF P ++ F ++ +C + N G + V+K G AD VG L+ ++ + G
Sbjct: 138 LELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSG 197
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH 149
L VF+ MP ++LVTW +++ F + G D + LF ++ S ++ V+
Sbjct: 198 DLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLS 257
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE---KMFKDVEIRD 206
+ L G+Q+H VI+ G ++ V SLV+MY +CA S + K+F+ + +
Sbjct: 258 ACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHN 317
Query: 207 VVSWNTIIGALAESENFGK-ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
V+SW II A +S K A+EL+ +M + PN +F V+ +C L + G+ ++
Sbjct: 318 VMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 377
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT 325
+ +K + VG++L+ YA+ +E A F + KN+VS+NA++ GYA
Sbjct: 378 SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 437
Query: 326 SIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLM 380
FLL E+ G + FTF+ +L + + + Q+H +++ GY++ + + +L+
Sbjct: 438 EAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALI 497
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
+ Y++ G I A ++ +++E +++SW
Sbjct: 498 SMYSRCGNIEAAF--------------------------------QVFNEMEDRNVISWT 525
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL------- 493
+I A +G LE+F M P+ T+V++LSACS + ++ G
Sbjct: 526 SMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKE 585
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG 552
HG++ + E + C ++D+ G+ G + +++ N M + + W L+ A ++G
Sbjct: 586 HGIVPRME-----HYAC--MVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG 638
Query: 553 ---FAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ A E E E PD A +L+
Sbjct: 639 NTELGRHAAEMILEQE-----PDDPAAYILLS 665
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 147/585 (25%), Positives = 277/585 (47%), Gaps = 52/585 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
R++VS+++++S ++ A+ FL M+ GF P ++ F ++ +C + N G +
Sbjct: 109 RDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEII 168
Query: 62 QASVLKNGLFCADAFVGTALLGLYGR-HGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
V+K G AD VG L+ ++ + G L VF+ MP ++LVTW +++ F + G
Sbjct: 169 YGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLG 228
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
D + LF ++ S ++ V+ + L G+Q+H VI+ G ++ V
Sbjct: 229 CARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGC 288
Query: 181 SLVNMYFQCAGIWSAE---KMFKDVEIRDVVSWNTIIGALAESENFGK-ALELYLRMSVD 236
SLV+MY +CA S + K+F+ + +V+SW II A +S K A+EL+ +M
Sbjct: 289 SLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISG 348
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ PN +F V+ +C L + G+ +++ +K + VG++L+ YA+ +E A
Sbjct: 349 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 408
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAF 355
F + KN+VS+NA++ GYA FLL E+ G + FTF+ +L + +
Sbjct: 409 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 468
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ Q+H +++ GY++ + + +L++ Y++ G I A + + ++I
Sbjct: 469 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 528
Query: 412 AGIYNRTGQYNETV----KLLSQLERPDIVSWNIVIAACAH-----------NGDYKE-- 454
G + + G + K+L +P+ +++ V++AC+H N YKE
Sbjct: 529 TG-FAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHG 587
Query: 455 --------------------VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
++E +++ + + D + +LL AC N LG
Sbjct: 588 IVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAA 647
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
+I + E ++ +L +++ G VKI M +RN+I
Sbjct: 648 EMILEQEPDDPAAYI--LLSNLHASAGQWKDVVKIRKSMKERNLI 690
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 252/485 (51%), Gaps = 30/485 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+RN+V++ +I+ +++ G DA+ +FL M G+ P +FT+ +LS C L + G
Sbjct: 209 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 268
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGR---HGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
QL + V++ GL D VG +L+ +Y + G +D+ VFE MP ++++W +I++
Sbjct: 269 KQLHSRVIRLGL-ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA 327
Query: 116 FGKHGFVE-DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + G + + + LFC+++ + SF V+ N D GEQ++ +K G
Sbjct: 328 YVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIAS 387
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V NSL++MY + + A K F + +++VS+N I+ A++ +A L+ ++
Sbjct: 388 VNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIA 447
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ + TF +++ A + G+ IH +++K + + + +AL+ Y++C N+E
Sbjct: 448 DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIE 507
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F+E+ ++N++SW ++I G+A T ++ + ++L+ G +PNE T+ VL +
Sbjct: 508 AAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSAC- 566
Query: 354 AFQLLQLHCLIIRMGYENY-----EYVLGSLMTSYA-------KSGLISDALAFVTALNI 401
H +I G +++ E+ + M YA +SGL+ +A+ F+ ++ +
Sbjct: 567 ------SHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 620
Query: 402 PRAVVPANIIAG---IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
+ + G ++ T +++ + E D ++ ++ A G +K+V+++
Sbjct: 621 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 680
Query: 459 FKYMR 463
K M+
Sbjct: 681 RKSMK 685
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 198/660 (30%), Positives = 319/660 (48%), Gaps = 42/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
MPD NVVS+ S++ YS G + L ++ M G Q TF + S L + V G
Sbjct: 907 MPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLG 966
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +++ G F V +L+ ++ ++E VF+ M +++WN+++S +
Sbjct: 967 YQVLGHIIQYG-FEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAH 1025
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG + + F + ++ ++ S+ +L++G IHGLV+K G D + +
Sbjct: 1026 HGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCI 1085
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+ +Y + AE +F+ + RD++SWN+++ + L++ +
Sbjct: 1086 CNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGK 1145
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N TF + +C+ + I K +HA +I + VG+ALV Y K + A
Sbjct: 1146 VMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKK 1205
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRS-----S 352
+ + V+WNALI G+A P +L+ + G N T VL +
Sbjct: 1206 VLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDD 1265
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L + +H I+ G+E+ +YV SL+T YAK
Sbjct: 1266 LLKHGMPIHAHIVLTGFESDDYVKNSLITMYAK--------------------------- 1298
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
G N + + L ++WN ++AA AH+G +E L++F MR + D +
Sbjct: 1299 -----CGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQF 1353
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+F L+A + L L G LHGL+ K SD V N +DMYGKCG + +K+ +
Sbjct: 1354 SFSGGLAATANLAVLEEGQQLHGLVIKLGF-ESDLHVTNAAMDMYGKCGEMHDVLKMLPQ 1412
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+R+ ++W LISA +G Q+A E F EM LG KPD V +++L+AC HGGLV EG
Sbjct: 1413 PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEG 1472
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ ++ M R +GV P ++H C++DLL R G L AE I MP PPN L WR+ L C+
Sbjct: 1473 LAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACR 1532
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 159/495 (32%), Positives = 249/495 (50%), Gaps = 39/495 (7%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
G IH +I NGF +L + L+ Y + + +A +F + R VVSW ++ ++
Sbjct: 49 GHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQ 108
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ F KA L+ M V NQ T+ + +C L+ +G + + K ++FV
Sbjct: 109 NGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFV 168
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGY 338
SALVDF++KC +E A F + +++VSWNA+I GYA + F + +L+ G
Sbjct: 169 KSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGL 228
Query: 339 RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
P+ +T VLR+S L Q+H +I ++GY +Y+ V G L+ +YAK+G + A
Sbjct: 229 VPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSA-- 286
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK- 453
L + + D+ S +I AH G Y
Sbjct: 287 ------------------------------KDLRKGMLKKDLFSSTALITGYAHEGIYSV 316
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
+ L+LFK M I D+ S+L+ C+ L + ALG+ +H K + S D + N L
Sbjct: 317 DALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQ-PSYDVAMGNAL 375
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
IDMY K G I + + F+EM ++NVI+WT+LIS +G+ A+ +++ME GFKP+
Sbjct: 376 IDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPND 435
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
V +++L AC H GL EG E F M Y ++P +HY C+VDL R G L+EA ++
Sbjct: 436 VTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLC 495
Query: 634 TMPFPPNALIWRTFL 648
+ NA +W L
Sbjct: 496 KIDIKHNASLWGAIL 510
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 187/665 (28%), Positives = 323/665 (48%), Gaps = 51/665 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV---E 57
M RN S+++++S Y R G E+A+ +F M G EP F L++ S + E
Sbjct: 805 MRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADE 864
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ V+K G+ D +VGTAL+ YG G + +FE+MP ++V+W S++ +
Sbjct: 865 GFQVHGFVVKTGIL-GDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYS 923
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + + ++ + + V+ +++F V +D G Q+ G +I+ GF+ +
Sbjct: 924 DSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVS 983
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VANSL++M+ + + A +F + D++SWN +I A A ++L + M
Sbjct: 984 VANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLH 1043
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
N TT +++ C+ + N G+ IH V+K L+ +V + + L+ Y++ E A
Sbjct: 1044 NETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAE 1103
Query: 298 LCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
L F ++ ++++SWN+++ Y + +L ELLQ+G N TF+ L + +
Sbjct: 1104 LVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPE 1163
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L +H LII G+ ++ V +L+T Y K G++ +A
Sbjct: 1164 CLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEA-------------------- 1203
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K+L + +PD V+WN +I A N + E ++ +K +R I P NY
Sbjct: 1204 ------------KKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGI-PANY 1250
Query: 473 -TFVSLLSACSKLCN-LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
T VS+L ACS + L G +H I T SD +V N LI MY KCG + SS IF
Sbjct: 1251 ITMVSVLGACSAPDDLLKHGMPIHAHIVLTG-FESDDYVKNSLITMYAKCGDLNSSNYIF 1309
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + +++ ITW A+++A +G + AL+ F EM +G D+ + L A + ++
Sbjct: 1310 DGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLE 1369
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN--ALIWRTFL 648
EG +L + + G E ++ + +D+ YG E ++ +P P N L W +
Sbjct: 1370 EGQQLHGLVIK-LGFESDLHVTNAAMDM---YGKCGEMHDVLKMLPQPINRSRLSWNILI 1425
Query: 649 EGCQR 653
R
Sbjct: 1426 SAFAR 1430
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 141/587 (24%), Positives = 269/587 (45%), Gaps = 45/587 (7%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
F L+ +Y + G ++ VF++M ++ +W++++S + + G E+ + LFC++
Sbjct: 780 FQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGL 839
Query: 136 EVALTESSFVGVIHGLSNEQDL-EFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
V +I S + + G Q+HG V+K G ++ V +LV+ Y +++
Sbjct: 840 GVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYN 899
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A+K+F+++ +VVSW +++ ++S N G+ L +Y RM + V NQ TF V +SC
Sbjct: 900 AQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGL 959
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
L++ +LG + +I+ E V V ++L+ ++ ++E A F ++ +I+SWNA+
Sbjct: 960 LEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAM 1019
Query: 315 ILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGY 369
I YA S+ + L N T S +L + L+ +H L++++G
Sbjct: 1020 ISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGL 1079
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
++ + +L+T Y+++G DA A+
Sbjct: 1080 DSNVCICNTLLTLYSEAGRSEDAELVFQAMT----------------------------- 1110
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
ER D++SWN ++A +G + L++ + ++ TF S L+ACS L
Sbjct: 1111 --ER-DLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIE 1167
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
+H LI V N L+ MYGK G + + K+ M + +TW ALI
Sbjct: 1168 SKIVHALI-IVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHA 1226
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH-GGLVREGMELFERMNRSYGVEPE 608
N A++ ++ + G + + +++VL AC L++ GM + + + G E +
Sbjct: 1227 ENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLT-GFESD 1285
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTM----PFPPNALIWRTFLEGC 651
+ ++ + + G L + I + P NA++ GC
Sbjct: 1286 DYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGC 1332
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 185/353 (52%), Gaps = 5/353 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
MP+R+VVS+ +++S YS+ G E A +F M + G + QFT+G L +C SL ++ G
Sbjct: 91 MPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMG 150
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+Q + K G F + FV +AL+ + + G +++ +F M + +V+WN+++ +
Sbjct: 151 IQVQGCIQK-GRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAV 209
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
GF +D +F ++R + + V+ + L QIHG++ + G+ +V
Sbjct: 210 QGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIV 269
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG-KALELYLRMSVDI 237
L+N Y + + SA+ + K + +D+ S +I A + AL+L+ M+
Sbjct: 270 TGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMN 329
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ + ++N CA L + LG IHA +K DV +G+AL+D YAK +E A
Sbjct: 330 IGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAK 389
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL 349
F E+ KN++SW +LI GYA ++ L ++ G++PN+ TF +L
Sbjct: 390 RAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLL 442
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/553 (23%), Positives = 247/553 (44%), Gaps = 47/553 (8%)
Query: 11 SIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGL 70
S I + G + +AL++ R +P+ + L D +G + ++ NG
Sbjct: 3 SKIQSACNLGRLAEALKLLSSNPTR-LDPSLYLKILQLCIDKKAKKQGHLIHTHLITNG- 60
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFC 130
F +D + T L+ Y + G + +VF+ MP +S+V+W ++VS + ++G E LF
Sbjct: 61 FGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFS 120
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
++ V + ++ + ++ + L+ G Q+ G + K F L V ++LV+ + +C
Sbjct: 121 DMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCG 180
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
+ A +F + RDVVSWN +IG A + ++ M + P+ T V+
Sbjct: 181 KMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLR 240
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+ A I+ IH + + V L++ YAK +L A + K++ S
Sbjct: 241 ASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFS 300
Query: 311 WNALILGYASKS--SPTSIFLLIELLQLGYRPNEFTFSHVLR--SSLA-FQL-LQLHCLI 364
ALI GYA + S ++ L E+ Q+ ++ +L ++LA F L Q+H
Sbjct: 301 STALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFA 360
Query: 365 IRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
++ +Y+ +G +L+ YAKSG I DA
Sbjct: 361 LKY-QPSYDVAMGNALIDMYAKSGEIEDA------------------------------- 388
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
+ ++E +++SW +I+ A +G + L+K M + P++ TF+SLL ACS
Sbjct: 389 -KRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSH 447
Query: 484 LCNLALG-SSLHGLIKKTEIIS-SDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVIT 540
A G + ++ K I ++ + C ++D++ + G + + + ++ N
Sbjct: 448 TGLTAEGCECFNNMVNKYNIKPRAEHYSC--MVDLFARQGLLEEAYNLLCKIDIKHNASL 505
Query: 541 WTALISALGLNGF 553
W A++ A + G+
Sbjct: 506 WGAILGASSIYGY 518
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 49/213 (23%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLN-PVEG 58
M ++NV+S+ S+IS Y++ GY A+ ++ M ++GF+P TF LL +C EG
Sbjct: 395 MEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEG 454
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ C + +V+ + PR ++ +V +F +
Sbjct: 455 CE-----------------------------CFNNMVNKYNIKPRAE--HYSCMVDLFAR 483
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN-----EQDLEFGEQIHGLVIKNGFD 173
G +E+ L C++ A S G I G S+ E + + +N +
Sbjct: 484 QGLLEEAYNLLCKIDIKHNA----SLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVN 539
Query: 174 YELLVANSLVNMYFQCAGIW-SAEKMFKDVEIR 205
Y +L + + AG+W A K+ K +E R
Sbjct: 540 YVVLAS------IYSAAGLWDDAWKIRKLMEER 566
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 198/655 (30%), Positives = 323/655 (49%), Gaps = 61/655 (9%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQA 63
R+VV +N ++ AY G +AL +F G P T C V+ Q
Sbjct: 791 RDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTL-----CTLARVVKSKQ--- 842
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+VL+ L A+ GT L +Y +V++ WN +S F + G
Sbjct: 843 NVLEWQLKQLKAY-GTKLF-MYDDDDDGSDVIA------------WNKTLSWFLQRGETW 888
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ + F +++ S VA +FV ++ ++ LE G+QIHG+V+++G D + V N L+
Sbjct: 889 EAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLI 948
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
NMY + + A +F + D+VSWNT+I A S ++ +++ + + P+Q
Sbjct: 949 NMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQF 1008
Query: 244 TFVYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T V+ +C+ L L IHA +K + D FV + L+D Y+K +E A F
Sbjct: 1009 TVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVN 1068
Query: 303 ISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF----QL 357
++ SWNA++ GY S P ++ L I + + G R N+ T ++ +++ Q
Sbjct: 1069 QDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQG 1128
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
Q+ ++++ G+ +V+ ++ Y K G + A
Sbjct: 1129 KQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESAR------------------------ 1164
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
++ +++ PD V+W +I+ C NG + L + +MR +++ PD YTF +L
Sbjct: 1165 --------RIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATL 1216
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
+ ACS L L G +H K + D FV L+DMY KCG+I + +F
Sbjct: 1217 VKACSLLTALEQGRQIHANTVKLNC-AFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSR 1275
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+ +W A+I L +G A+ AL+ F EM+ G PDRV I VL+AC H GLV E E F
Sbjct: 1276 IASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFY 1335
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M + YG+EPE++HY C+VD L R G ++EAEK+I++MPF +A ++RT L C+
Sbjct: 1336 SMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACR 1390
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 131/504 (25%), Positives = 234/504 (46%), Gaps = 42/504 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNP--VE 57
M + ++VS+N++IS + G E ++ MF+ ++ G P QFT +L +C SL
Sbjct: 967 MNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHL 1026
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ A +K G+ D+FV T L+ +Y + G ++E +F + L +WN+++ +
Sbjct: 1027 ATQIHACAMKAGVVL-DSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYI 1085
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + L+ + S + + L+ G+QI +V+K GF+ +L
Sbjct: 1086 VSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLF 1145
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V + +++MY +C + SA ++F ++ D V+W T+I E+ AL Y M +
Sbjct: 1146 VISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSK 1205
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P++ TF ++ +C+ L G+ IHA +K D FV ++LVD YAKC N+E A
Sbjct: 1206 VQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDAR 1265
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQ 356
F + I SWNA+I+G A + E ++ G P+ TF VL +
Sbjct: 1266 GLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSAC---- 1321
Query: 357 LLQLHCLIIRMGYENY---EYVLG---------SLMTSYAKSGLISDALAFVTALNIPRA 404
H ++ YEN+ + + G L+ + +++G I +A ++++
Sbjct: 1322 ---SHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSM----- 1373
Query: 405 VVPANIIAGIYN------RTGQYNETVKLLSQ----LERPDIVSWNIVIAACAHNGDYKE 454
P A +Y R ET K +++ LE D ++ ++ A ++
Sbjct: 1374 --PFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWEN 1431
Query: 455 VLELFKYMRAARIYPD-NYTFVSL 477
V MR A + D +++V L
Sbjct: 1432 VASARNMMRKANVKKDPGFSWVDL 1455
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 139/555 (25%), Positives = 250/555 (45%), Gaps = 69/555 (12%)
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE--IRDVVSWNTI 213
DL G++ H ++ +G + + N+L+ MY +C + SA K+F RD+V+WN I
Sbjct: 641 DLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAI 700
Query: 214 IGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
+ A A+ G L LR S V + T V C + +S+H +K L
Sbjct: 701 LSAHADKARDGFHLFRLLRRS--FVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGL 758
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIE 332
+ DVFV ALV+ YAK + A + F + +++V WN ++ Y ++ L E
Sbjct: 759 QWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSE 818
Query: 333 LLQLGYRPNEF---TFSHVLRSS---LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAK- 385
+ G RP++ T + V++S L +QL QL ++ + + GS + ++ K
Sbjct: 819 FNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKL-FMYDDDDDGSDVIAWNKT 877
Query: 386 ----------------------SGLISDALAFVTALNI---------------------- 401
S + D L FV L++
Sbjct: 878 LSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGL 937
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
+ V N + +Y +TG + + Q+ D+VSWN +I+ CA +G + + +F
Sbjct: 938 DQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVD 997
Query: 462 MRAARIYPDNYTFVSLLSACSKL---CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYG 518
+ + PD +T S+L ACS L C+LA + +H K ++ D+FV LID+Y
Sbjct: 998 LLRGGLLPDQFTVASVLRACSSLGGGCHLA--TQIHACAMKAGVV-LDSFVSTTLIDVYS 1054
Query: 519 KCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
K G + + +F ++ +W A++ ++G +AL + M+ G + +++ L
Sbjct: 1055 KSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLAN 1114
Query: 579 VLTACRHGGLV--REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
A GGLV ++G ++ + + G ++ V+D+ ++ G ++ A +I +P
Sbjct: 1115 AAKAA--GGLVGLKQGKQI-QAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIP 1171
Query: 637 FPPNALIWRTFLEGC 651
P+ + W T + GC
Sbjct: 1172 -SPDDVAWTTMISGC 1185
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+ S+L +L LG H I T D F+ N LI MY KCGS+ S+ K+F+
Sbjct: 629 WFSILRHAIAASDLPLGKRAHARIL-TSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTT 687
Query: 534 TD--RNVITWTALISA 547
D R+++TW A++SA
Sbjct: 688 PDTSRDLVTWNAILSA 703
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 198/660 (30%), Positives = 319/660 (48%), Gaps = 42/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
MPD NVVS+ S++ YS G + L ++ M G Q TF + S L + V G
Sbjct: 257 MPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLG 316
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +++ G F V +L+ ++ ++E VF+ M +++WN+++S +
Sbjct: 317 YQVLGHIIQYG-FEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAH 375
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG + + F + ++ ++ S+ +L++G IHGLV+K G D + +
Sbjct: 376 HGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCI 435
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+ +Y + AE +F+ + RD++SWN+++ + L++ +
Sbjct: 436 CNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGK 495
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N TF + +C+ + I K +HA +I + VG+ALV Y K + A
Sbjct: 496 VMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKK 555
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRS-----S 352
+ + V+WNALI G+A P +L+ + G N T VL +
Sbjct: 556 VLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDD 615
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L + +H I+ G+E+ +YV SL+T YAK
Sbjct: 616 LLKHGMPIHAHIVLTGFESDDYVKNSLITMYAK--------------------------- 648
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
G N + + L ++WN ++AA AH+G +E L++F MR + D +
Sbjct: 649 -----CGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQF 703
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+F L+A + L L G LHGL+ K SD V N +DMYGKCG + +K+ +
Sbjct: 704 SFSGGLAATANLAVLEEGQQLHGLVIKLGF-ESDLHVTNAAMDMYGKCGEMHDVLKMLPQ 762
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+R+ ++W LISA +G Q+A E F EM LG KPD V +++L+AC HGGLV EG
Sbjct: 763 PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEG 822
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ ++ M R +GV P ++H C++DLL R G L AE I MP PPN L WR+ L C+
Sbjct: 823 LAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACR 882
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 187/665 (28%), Positives = 323/665 (48%), Gaps = 51/665 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV---E 57
M RN S+++++S Y R G E+A+ +F M G EP F L++ S + E
Sbjct: 155 MRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADE 214
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ V+K G+ D +VGTAL+ YG G + +FE+MP ++V+W S++ +
Sbjct: 215 GFQVHGFVVKTGIL-GDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYS 273
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + + ++ + + V+ +++F V +D G Q+ G +I+ GF+ +
Sbjct: 274 DSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVS 333
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VANSL++M+ + + A +F + D++SWN +I A A ++L + M
Sbjct: 334 VANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLH 393
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
N TT +++ C+ + N G+ IH V+K L+ +V + + L+ Y++ E A
Sbjct: 394 NETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAE 453
Query: 298 LCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
L F ++ ++++SWN+++ Y + +L ELLQ+G N TF+ L + +
Sbjct: 454 LVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPE 513
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L +H LII G+ ++ V +L+T Y K G++ +A
Sbjct: 514 CLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEA-------------------- 553
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K+L + +PD V+WN +I A N + E ++ +K +R I P NY
Sbjct: 554 ------------KKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGI-PANY 600
Query: 473 -TFVSLLSACSKLCN-LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
T VS+L ACS + L G +H I T SD +V N LI MY KCG + SS IF
Sbjct: 601 ITMVSVLGACSAPDDLLKHGMPIHAHIVLTG-FESDDYVKNSLITMYAKCGDLNSSNYIF 659
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + +++ ITW A+++A +G + AL+ F EM +G D+ + L A + ++
Sbjct: 660 DGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLE 719
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN--ALIWRTFL 648
EG +L + + G E ++ + +D+ YG E ++ +P P N L W +
Sbjct: 720 EGQQLHGLVIK-LGFESDLHVTNAAMDM---YGKCGEMHDVLKMLPQPINRSRLSWNILI 775
Query: 649 EGCQR 653
R
Sbjct: 776 SAFAR 780
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 141/587 (24%), Positives = 269/587 (45%), Gaps = 45/587 (7%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
F L+ +Y + G ++ VF++M ++ +W++++S + + G E+ + LFC++
Sbjct: 130 FQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGL 189
Query: 136 EVALTESSFVGVIHGLSNEQDL-EFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
V +I S + + G Q+HG V+K G ++ V +LV+ Y +++
Sbjct: 190 GVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYN 249
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A+K+F+++ +VVSW +++ ++S N G+ L +Y RM + V NQ TF V +SC
Sbjct: 250 AQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGL 309
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
L++ +LG + +I+ E V V ++L+ ++ ++E A F ++ +I+SWNA+
Sbjct: 310 LEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAM 369
Query: 315 ILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGY 369
I YA S+ + L N T S +L + L+ +H L++++G
Sbjct: 370 ISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGL 429
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
++ + +L+T Y+++G DA A+
Sbjct: 430 DSNVCICNTLLTLYSEAGRSEDAELVFQAMT----------------------------- 460
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
ER D++SWN ++A +G + L++ + ++ TF S L+ACS L
Sbjct: 461 --ER-DLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIE 517
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
+H LI V N L+ MYGK G + + K+ M + +TW ALI
Sbjct: 518 SKIVHALI-IVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHA 576
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-HGGLVREGMELFERMNRSYGVEPE 608
N A++ ++ + G + + +++VL AC L++ GM + + + G E +
Sbjct: 577 ENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLT-GFESD 635
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTM----PFPPNALIWRTFLEGC 651
+ ++ + + G L + I + P NA++ GC
Sbjct: 636 DYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGC 682
>gi|302771700|ref|XP_002969268.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
gi|300162744|gb|EFJ29356.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
Length = 849
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 189/657 (28%), Positives = 324/657 (49%), Gaps = 47/657 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP R+V+S+ +++AY+R G++ +A +L M+ G P TF +L+ + + A+
Sbjct: 187 MPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLA--ACSSARDAE 244
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L + + +D V A + ++ + GCLD VF M R + +WN++V+ +HG
Sbjct: 245 LVYGNVVEAEWESDTMVANASINMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHG 304
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F + + LF + SEVA+ +++ V + + + LE G+ IH V + G + +++
Sbjct: 305 FSSEALELFRRMP-SEVAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGT 363
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF-GKALELYLRMSVDIVF 239
+LV MY +C + A ++F + ++VVSWN +I A E+ +ALE++ M +D V
Sbjct: 364 ALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVR 423
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P +TT +N + ++ +GK +H ++ L D F+GSALV+ Y + +L A
Sbjct: 424 PTRTT---ALNVVSAVECQSVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRV 480
Query: 300 FSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F +I +++ +WNA++ P ++ +L G N TF L + ++
Sbjct: 481 FEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAVSPDRVC 540
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+LH LI G E V +L++ YA+ + DA
Sbjct: 541 YGRRLHGLIAESGLEADNNVANALISMYARCKSLEDAR---------------------- 578
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+LE IVSW VIAAC G +E ++LF+ M + PD TF
Sbjct: 579 ----------NTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRME---LEPDRVTFT 625
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
++L AC+ + G +H ++ + S+ FV LI M+ K G++G + +IF +
Sbjct: 626 TVLEACTIVSAHREGKLVHSRARELGL-ESNVFVATALIHMHSKFGNLGEARRIFEAVEA 684
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+ W A++ G +Q ++ F M+ G PD + +AV++AC H GLV +G
Sbjct: 685 PTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSACSHAGLVEKGART 744
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M YGV ++ Y C++DLL R G L+EA + MP P+ + W+T L C+
Sbjct: 745 FASMGTDYGVGHGLEDYGCLIDLLARAGQLEEAYDFLQGMPCGPSDVTWKTLLAACK 801
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 188/657 (28%), Positives = 328/657 (49%), Gaps = 56/657 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M DR++V + S+++A+ V+ A F M G P + TF +L +C+SL +G
Sbjct: 89 MLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRVTFISILNACESL--AQGE 146
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ ++ L +D +G AL+ + + LD F+ MPR+ +++W +V+ + ++
Sbjct: 147 LVHRLIIDKNLE-SDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARN 205
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + + + ++ V +F+ V+ S+ +D E ++G V++ ++ + +VA
Sbjct: 206 GHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDAEL---VYGNVVEAEWESDTMVA 262
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+ +NM+ +C + A +F ++ DV SWN ++ ALA+ +ALEL+ RM ++
Sbjct: 263 NASINMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSEVAV 322
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
++TT V +++CA ++ GKSIH++V + LE DV G+ALV Y++C +L A
Sbjct: 323 -DKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRV 381
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL--GYRPNEFTFSHVLRSSLAFQL 357
F I KN+VSWN +I Y S S L I L L G RP T +V+ S++ Q
Sbjct: 382 FDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVV-SAVECQS 440
Query: 358 L--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+ QLH I+ G + ++ +L+ Y ++G + DA
Sbjct: 441 VGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDAR---------------------- 478
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
++ ++ D+ +WN ++ C +G +E LE F M + TF+
Sbjct: 479 ----------RVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFL 528
Query: 476 SLLSACS--KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
LSA S ++C G LHGLI ++ + +D V N LI MY +C S+ + F+ +
Sbjct: 529 LALSAVSPDRVC---YGRRLHGLIAESG-LEADNNVANALISMYARCKSLEDARNTFDRL 584
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
D+++++WT++I+A G Q A++ F+ ME +PDRV VL AC REG
Sbjct: 585 EDKSIVSWTSVIAACVDLGSCQEAIDLFQRME---LEPDRVTFTTVLEACTIVSAHREG- 640
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+L R G+E + ++ + ++G+L EA +I + P A W L G
Sbjct: 641 KLVHSRARELGLESNVFVATALIHMHSKFGNLGEARRIFEAVEAPTLA-CWNAMLGG 696
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/521 (25%), Positives = 245/521 (47%), Gaps = 62/521 (11%)
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
V+ S F+ +++ + + L ++ + G + S+V M+ +C I A
Sbjct: 24 VSDDHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDAS 83
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
++F+ + R +V W +++ A + E+ +A + RM ++ V P++ TF+ ++N+C L
Sbjct: 84 RVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRVTFISILNACESLA 143
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
G+ +H +I LE DV +G+AL+ AKC +L+GA F + ++++SW ++
Sbjct: 144 Q---GELVHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVT 200
Query: 317 GYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV 375
YA F + +L G PN TF VL + C R + E V
Sbjct: 201 AYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAA----------CSSAR----DAELV 246
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
G+++ + +S + AN ++++ G + + +++R D
Sbjct: 247 YGNVVEAEWESD-----------------TMVANASINMFSKCGCLDRARDVFHRMKRWD 289
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
+ SWN ++AA A +G E LELF+ M + + D T V LS C+ +L G S+H
Sbjct: 290 VKSWNAMVAALAQHGFSSEALELFRRM-PSEVAVDKTTLVIALSTCAAPESLEDGKSIHS 348
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN-GFA 554
+ + + +D L+ MY +CG +G + ++F+ + +NV++W +I+A G +
Sbjct: 349 RVARLG-LETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLH 407
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTA--CR------HGGLVREGMELFERMNRSYGVE 606
RALE FR M G +P R + V++A C+ HG +V G+ + +
Sbjct: 408 SRALEIFRLMLLDGVRPTRTTALNVVSAVECQSVGKQLHGWIVDTGLYSDSFIGSA---- 463
Query: 607 PEMDHYHCVVDLLVRYGHLKEA----EKIITTMPFPPNALI 643
+V++ R G L +A EKII F NA++
Sbjct: 464 --------LVNMYERTGSLGDARRVFEKIIERDVFAWNAIV 496
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/560 (24%), Positives = 261/560 (46%), Gaps = 40/560 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLLSCDSLNPVE-G 58
M +V S+N++++A ++ G+ +AL +F M + + T L +C + +E G
Sbjct: 285 MKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSEVAVDKTTLVIA-LSTCAAPESLEDG 343
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + V + GL D GTAL+ +Y R G L E VF+ + K++V+WN++++ +G+
Sbjct: 344 KSIHSRVARLGLE-TDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGR 402
Query: 119 -HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ +F ++ V T ++ + V+ + + G+Q+HG ++ G +
Sbjct: 403 DESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVECQS---VGKQLHGWIVDTGLYSDSF 459
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ ++LVNMY + + A ++F+ + RDV +WN I+G +ALE + RM ++
Sbjct: 460 IGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEG 519
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
N+ TF+ + S G+ +H + ++ LE D V +AL+ YA+C +LE A
Sbjct: 520 ASGNRATFLLAL-SAVSPDRVCYGRRLHGLIAESGLEADNNVANALISMYARCKSLEDAR 578
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + +K+IVSW ++I S L + ++L P+ TF+ VL +
Sbjct: 579 NTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRMEL--EPDRVTFTTVLEA------ 630
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
C I+ E G L+ S A+ L + V A + ++++
Sbjct: 631 ----CTIVSAHRE------GKLVHSRARE------------LGLESNVFVATALIHMHSK 668
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G E ++ +E P + WN ++ A G + V++ F M+ + PD+ TF+++
Sbjct: 669 FGNLGEARRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAV 728
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DR 536
+SACS + G+ + + LID+ + G + + M
Sbjct: 729 VSACSHAGLVEKGARTFASMGTDYGVGHGLEDYGCLIDLLARAGQLEEAYDFLQGMPCGP 788
Query: 537 NVITWTALISALGLNGFAQR 556
+ +TW L++A + G +R
Sbjct: 789 SDVTWKTLLAACKIQGDVRR 808
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 235/488 (48%), Gaps = 53/488 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVED-ALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQ 62
+NVVS+N++I+AY R + AL +F M+ G PT+ T ++S V G QL
Sbjct: 388 KNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVECQSV-GKQLH 446
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
++ GL+ +D+F+G+AL+ +Y R G L + VFE + + + WN+IV + HG
Sbjct: 447 GWIVDTGLY-SDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQP 505
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ + F ++ + ++F+ + +S ++ + +G ++HGL+ ++G + + VAN+L
Sbjct: 506 REALEWFSRMLLEGASGNRATFLLALSAVSPDR-VCYGRRLHGLIAESGLEADNNVANAL 564
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
++MY +C + A F +E + +VSW ++I A + + +A++L+ RM ++ P++
Sbjct: 565 ISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRMELE---PDR 621
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
TF V+ +C + GK +H++ + LE +VFV +AL+ ++K NL A F
Sbjct: 622 VTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVATALIHMHSKFGNLGEARRIFEA 681
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLLQLH 361
+ + WNA++ GYA S+ + Q G P+ TF V+ + H
Sbjct: 682 VEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSAC-------SH 734
Query: 362 CLIIRMGYENY-----EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
++ G + +Y +G + Y G + D LA
Sbjct: 735 AGLVEKGARTFASMGTDYGVGHGLEDY---GCLIDLLA---------------------- 769
Query: 417 RTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKE-------VLELFKYMRAARIY 468
R GQ E L + P V+W ++AAC GD + V+E Y AA +
Sbjct: 770 RAGQLEEAYDFLQGMPCGPSDVTWKTLLAACKIQGDVRRGSAAARSVIEREPYGAAAFVE 829
Query: 469 PDNYTFVS 476
N + ++
Sbjct: 830 LSNMSSIA 837
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 200/660 (30%), Positives = 332/660 (50%), Gaps = 45/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSL-NPVEG 58
+ + N+VS+ S++ Y+ G V++ + ++ + G + ++ SC L + + G
Sbjct: 120 IEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLG 179
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ SV+K+GL + V +L+ ++G ++E VF+DM + ++WNSI++
Sbjct: 180 YQVLGSVIKSGLDTTVS-VANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVH 238
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G E + F ++ + + ++ + Q+L +G +HG+V+K+G + + V
Sbjct: 239 NGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCV 298
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY Q AE +F + RD++SWN+++ + ++ N+ +ALEL + M
Sbjct: 299 CNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRK 358
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N TF +++C L+ K +HA VI L ++ +G+ALV Y K ++ A
Sbjct: 359 ATNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQR 415
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQL 357
+ +++ V+WNALI G+A P + LL + G N T ++L + L+
Sbjct: 416 VCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDD 475
Query: 358 L-----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L +H I+ G+E +V SL+T YA+
Sbjct: 476 LLDHGMPIHAHIVVAGFELETFVQSSLITMYAQ--------------------------- 508
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
G N + + L + +WN +++A AH G +E L+L MR I+ D +
Sbjct: 509 -----CGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQF 563
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+F + L L G LH LI K S+D +V N +DMYGKCG I +I +
Sbjct: 564 SFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESND-YVLNATMDMYGKCGEIDDVFRILPQ 622
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
R+ +W LISAL +GF Q+A E F EM LG +PD V +++L+AC HGGLV EG
Sbjct: 623 PRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEG 682
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F M+ +GV ++H C++DLL R G L EAE I MP PP L+WR+ L C+
Sbjct: 683 LAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACK 742
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 185/647 (28%), Positives = 320/647 (49%), Gaps = 50/647 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CD-SLNPVEG 58
MP+RN S+N+++S + R G+ + A++ F +M+ G P+ + L++ CD S EG
Sbjct: 18 MPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLVTACDRSGCMTEG 77
Query: 59 A-QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
A Q+ A V+K GL C D FVGT+LL YG G + EV VF+++ ++V+W S++ +
Sbjct: 78 AFQVHAHVIKCGLAC-DVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYA 136
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G V++ M ++ L R V E++ VI D G Q+ G VIK+G D +
Sbjct: 137 YNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVS 196
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VANSL++M+ C I A +F D++ RD +SWN+II A + + K+LE + +M
Sbjct: 197 VANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTH 256
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ T ++ C QN G+ +H V+K+ LE +V V ++L+ Y++ E A
Sbjct: 257 AKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAE 316
Query: 298 LCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F ++ ++++SWN+++ + + P ++ LLIE+LQ N TF+ L + +
Sbjct: 317 FVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLE 376
Query: 357 LLQL-HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L++ H +I +G + + +L+T Y K G ++ A
Sbjct: 377 TLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQ---------------------- 414
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY-TF 474
++ + D V+WN +I A N + +E F +R + P NY T
Sbjct: 415 ----------RVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGV-PVNYITI 463
Query: 475 VSLLSA---CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
V+LLSA L + + H ++ E+ +TFV + LI MY +CG + +S IF+
Sbjct: 464 VNLLSAFLSPDDLLDHGMPIHAHIVVAGFEL---ETFVQSSLITMYAQCGDLNTSNYIFD 520
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ ++N TW A++SA G + AL+ +M G D+ + + L+ E
Sbjct: 521 VLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDE 580
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFP 638
G +L + + +G E + +D+ YG E + + +P P
Sbjct: 581 GQQLHSLIIK-HGFESNDYVLNATMDM---YGKCGEIDDVFRILPQP 623
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 128/507 (25%), Positives = 239/507 (47%), Gaps = 46/507 (9%)
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
+Y + G ++ VF+ MP ++ +WN+++S F + G+ + M FC ++ E + SS
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHML--EHGVRPSS 58
Query: 144 FVGVIHGLSNEQD---LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
+V + ++ E Q+H VIK G ++ V SL++ Y + + +FK
Sbjct: 59 YVAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFK 118
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
++E ++VSW +++ A + + + +Y R+ D V+ N+ VI SC L + +L
Sbjct: 119 EIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKML 178
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
G + VIK+ L+ V V ++L+ + CD++E A F ++ ++ +SWN++I
Sbjct: 179 GYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVH 238
Query: 321 KSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYV 375
S+ ++ + + T S +L + Q L+ LH ++++ G E+ V
Sbjct: 239 NGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCV 298
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
SL++ Y+++G DA FV ++ D
Sbjct: 299 CNSLLSMYSQAGKSEDA-EFV-------------------------------FHKMRERD 326
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
++SWN ++A+ NG+Y LEL M R + TF + LSAC L L + +
Sbjct: 327 LISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKIVHAFVI 386
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
L+ + + + N L+ MYGK GS+ ++ ++ M DR+ +TW ALI N
Sbjct: 387 LLG----LHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPN 442
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTA 582
A+E F + G + + ++ +L+A
Sbjct: 443 AAIEAFNLLREEGVPVNYITIVNLLSA 469
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY K GSI + +F++M +RN +W L+S G+ Q+A++ F M G +P
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 576 LIAVLTACRHGGLVREG 592
+++TAC G + EG
Sbjct: 61 AASLVTACDRSGCMTEG 77
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG-AQ 60
R+ S+N +ISA +R G+ + A F M++ G P TF LLS S + EG A
Sbjct: 626 RSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAY 685
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKH 119
+ K G+ ++ L GR G L E + MP + + W S+++ H
Sbjct: 686 FSSMSTKFGVPTGIEHC-VCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIH 744
Query: 120 GFVE 123
G +E
Sbjct: 745 GNLE 748
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 217/673 (32%), Positives = 343/673 (50%), Gaps = 60/673 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRG----FEPTQFTFGGLLS--CDSLN--- 54
RN +S+NSIIS YSR G A +F M G F+P ++TFG L++ C S++
Sbjct: 712 RNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGL 771
Query: 55 -PVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
+E Q+ A V K+G F D +VG+AL+ + R G D+ ++FE M +++V+ N ++
Sbjct: 772 CVLE--QMLARVEKSG-FLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLM 828
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN----EQDLEFGEQIHGLVIK 169
K E +F E+ + V + S+V ++ S E+ G ++H VI+
Sbjct: 829 VGLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIR 887
Query: 170 NGF-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
G D ++ + N LVNMY + I A +F+ + +D VSWN++I L ++E A E
Sbjct: 888 TGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAE 947
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
+LRM P+ T + ++SCA L +LG+ IH +K L+ DV V +AL+ YA
Sbjct: 948 SFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYA 1007
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALI--LGYASKSSPTSIFLLIELLQLGYRPNEFTFS 346
+ FS + + VSWN++I L + S ++ +E+++ G+ + TF
Sbjct: 1008 ETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFI 1067
Query: 347 HVLR--SSLAFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
++L SSL+ + Q+H L+++ +SD A
Sbjct: 1068 NILSAVSSLSLHEVSHQIHALVLKY--------------------CLSDDTAI------- 1100
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
N + Y + G+ NE K+ +++ E D VSWN +I+ HN + ++L +
Sbjct: 1101 -----GNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWF 1155
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M D++TF ++LSAC+ + L G +H + + SD V + L+DMY KCG
Sbjct: 1156 MMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRA-CMESDVVVGSALVDMYSKCG 1214
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA-LIAVL 580
I + + F M RNV +W ++IS +G ++AL+ F M G PD VA L+ VL
Sbjct: 1215 RIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVL 1274
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
+AC H G V EG E F+ M+ Y + P ++H+ C+VDLL R G L E I +MP PN
Sbjct: 1275 SACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPN 1334
Query: 641 ALIWRTFLEGCQR 653
LIWRT L C R
Sbjct: 1335 VLIWRTVLGACCR 1347
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 179/680 (26%), Positives = 317/680 (46%), Gaps = 68/680 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-- 57
M +RN+V++ +IS Y++ G ++A F M+ GF P + FG L +C P
Sbjct: 605 MSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCK 664
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLD---EVVSVFEDMPRKSLVTWNSIV 113
G Q+ + K + +D V L+ +YG CLD + SVF+ + ++ ++WNSI+
Sbjct: 665 LGVQIHGLISKT-RYGSDVVVCNVLISMYG--SCLDSANDARSVFDRIGIRNSISWNSII 721
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALT----ESSFVGVIHGLSNEQDLEFG----EQIHG 165
S++ + G LF + + + + E +F +I + D FG EQ+
Sbjct: 722 SVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVD--FGLCVLEQMLA 779
Query: 166 LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
V K+GF +L V ++LV+ + + A+ +F+ + +R+VVS N ++ L + +
Sbjct: 780 RVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEA 839
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGL----QNSILGKSIHAKVIKNAL-ECDVFVG 280
A +++ M D+V N ++V ++++ + + G+ +HA VI+ L + V +G
Sbjct: 840 AAKVFHEMK-DLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIG 898
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYR 339
+ LV+ YAK + A F + K+ VSWN+LI G ++ S + + + + G
Sbjct: 899 NGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSM 958
Query: 340 PNEFTFSHVLRS--SLAFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
P+ FT L S SL + +L Q+HC +++G + V +L+ YA+
Sbjct: 959 PSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAE---------- 1008
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN-GDYKE 454
TG + E +K+ S + D VSWN VI A + + +
Sbjct: 1009 ----------------------TGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQ 1046
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
++ F M TF+++LSA S L + +H L+ K +S DT + N L+
Sbjct: 1047 AVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKY-CLSDDTAIGNALL 1105
Query: 515 DMYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
YGKCG + KIF M++ R+ ++W ++IS N +A++ M G + D
Sbjct: 1106 SCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDS 1165
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
VL+AC + GME+ R+ +E ++ +VD+ + G + A +
Sbjct: 1166 FTFATVLSACASVATLERGMEVHACGIRAC-MESDVVVGSALVDMYSKCGRIDYASRFFE 1224
Query: 634 TMPFPPNALIWRTFLEGCQR 653
MP N W + + G R
Sbjct: 1225 LMPL-RNVYSWNSMISGYAR 1243
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 149/613 (24%), Positives = 277/613 (45%), Gaps = 54/613 (8%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
E +L +K G F + F+ L+ +Y R G L +F++M ++LVTW ++S +
Sbjct: 562 EARELHLQSIKYG-FVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 620
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL--SNEQDLEFGEQIHGLVIKNGFDY 174
++G ++ F ++VR+ +F + S + G QIHGL+ K +
Sbjct: 621 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGS 680
Query: 175 ELLVANSLVNMYFQC-AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+++V N L++MY C A +F + IR+ +SWN+II + + A +L+ M
Sbjct: 681 DVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSM 740
Query: 234 SVDIV----FPNQTTFVYVIN-SCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFY 287
+ + PN+ TF +I +C+ + + + + + A+V K+ D++VGSALV +
Sbjct: 741 QKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGF 800
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSH 347
A+ + A F ++ +N+VS N L++G + + + ++ N ++
Sbjct: 801 ARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVV 860
Query: 348 VLRSSLAFQLL--------QLHCLIIRMGYENYEYVLGS-LMTSYAKSGLISDALAFVTA 398
+L + F +L ++H +IR G + + +G+ L+ YAKSG I+DA +
Sbjct: 861 LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACS---- 916
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
+ + D VSWN +I+ N ++ E
Sbjct: 917 ----------------------------VFELMVEKDSVSWNSLISGLDQNECSEDAAES 948
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYG 518
F MR P N+T +S LS+C+ L + LG +H K + +D V N L+ +Y
Sbjct: 949 FLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLG-LDTDVSVSNALLALYA 1007
Query: 519 KCGSIGSSVKIFNEMTDRNVITWTALISALG-LNGFAQRALEKFREMEFLGFKPDRVALI 577
+ G +K+F+ M + + ++W ++I AL +A++ F EM G+ RV I
Sbjct: 1008 ETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFI 1067
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
+L+A L E + Y + + + ++ + G + E EKI M
Sbjct: 1068 NILSAVSSLSL-HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSE 1126
Query: 638 PPNALIWRTFLEG 650
+ + W + + G
Sbjct: 1127 TRDEVSWNSMISG 1139
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 220/497 (44%), Gaps = 52/497 (10%)
Query: 158 EFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL 217
E ++H IK GF L ++N+L+N+Y + + SA+K+F ++ R++V+W +I
Sbjct: 561 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 620
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSC--AGLQNSILGKSIHAKVIKNALEC 275
++ +A + M PN F + +C +G LG IH + K
Sbjct: 621 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGS 680
Query: 276 DVFVGSALVDFYAKC-DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
DV V + L+ Y C D+ A F I +N +SWN++I Y+ + S + L +
Sbjct: 681 DVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSM 740
Query: 335 Q-----LGYRPNEFTFSHVLR---SSLAFQLLQLHCLIIRM---GYENYEYVLGSLMTSY 383
Q ++PNE+TF ++ SS+ F L L ++ R+ G+ YV +L++ +
Sbjct: 741 QKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGF 800
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
A+ GL DA + + V ++ G+ + Q K+ +++ D+V N
Sbjct: 801 ARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLV-KQKQGEAAAKVFHEMK--DLVGIN--- 854
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA----LGSSLHGLIKK 499
+ ++V LLSA S+ L G +H + +
Sbjct: 855 ---------------------------SDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIR 887
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
T + + + N L++MY K G+I + +F M +++ ++W +LIS L N ++ A E
Sbjct: 888 TGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAE 947
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
F M G P LI+ L++C G + G E G++ ++ + ++ L
Sbjct: 948 SFLRMRRTGSMPSNFTLISTLSSCASLGWIMLG-EQIHCDGLKLGLDTDVSVSNALLALY 1006
Query: 620 VRYGHLKEAEKIITTMP 636
G E K+ + MP
Sbjct: 1007 AETGCFTECLKVFSLMP 1023
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/431 (22%), Positives = 190/431 (44%), Gaps = 53/431 (12%)
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+F + TF +IN G S + +H + IK ++F+ + L++ Y + +L A
Sbjct: 540 LFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQ 599
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS----- 351
F E+SN+N+V+W LI GY P + ++++ G+ PN + F LR+
Sbjct: 600 KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 659
Query: 352 -SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
S +Q+H LI + Y + V L++ Y + AN
Sbjct: 660 PSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGS------------------CLDSAND 701
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI--- 467
+++R G N +SWN +I+ + GD +LF M+ +
Sbjct: 702 ARSVFDRIGIRNS-------------ISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFS 748
Query: 468 -YPDNYTFVSLLS-ACSKL-CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
P+ YTF SL++ ACS + L + + ++K+ + D +V + L+ + + G
Sbjct: 749 FKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFL-QDLYVGSALVSGFARFGLTD 807
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTAC 583
+ IF +M RNV++ L+ L + A + F EM + +G D + + +L+A
Sbjct: 808 DAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD--SYVVLLSAF 865
Query: 584 RHGGLV----REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
++ R+G E+ + R+ + ++ + +V++ + G + +A + M
Sbjct: 866 SEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELM-VEK 924
Query: 640 NALIWRTFLEG 650
+++ W + + G
Sbjct: 925 DSVSWNSLISG 935
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFT--FGGLLSCDSLNPV-E 57
MP RNV S+NS+IS Y+R G+ E AL++F M+ G P G L +C + V E
Sbjct: 1226 MPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEE 1285
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIV 113
G + S+ + + ++ L GR G LDEV MP K +++ W +++
Sbjct: 1286 GFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 1342
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 200/657 (30%), Positives = 325/657 (49%), Gaps = 41/657 (6%)
Query: 7 VSFNSIISAYSRCGYVEDALRMFLYMINRGFEP--TQFTFGGLL-SCDSLNPVEGAQLQA 63
+ +N +I + G AL +L M P TF ++ SC +L + +L
Sbjct: 110 LPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVH 169
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+ D FVG+AL+ +Y G L + VF+ M + V WN ++ + K G V
Sbjct: 170 RTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVS 229
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ LF ++ S ++ + + E DL FG Q+H L +K G + E+ VAN+LV
Sbjct: 230 SAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLV 289
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
+MY +C + K+F + D+V+WN +I ++ +AL L+ M + P+
Sbjct: 290 SMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSV 349
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
T V ++ + L GK +H +++N + DVF+ SALVD Y KC + A +
Sbjct: 350 TLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSS 409
Query: 304 SNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL---RSSLAFQLLQ 359
++V + +I GY + S ++ + LL+ G RPN + VL S A +L Q
Sbjct: 410 KAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQ 469
Query: 360 -LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
LH ++ YE YV +LM YAK
Sbjct: 470 ELHSYALKNAYEGRCYVESALMDMYAK--------------------------------C 497
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
G+ + + + S++ D V+WN +I++ A NG+ +E L LF+ M + N T S+L
Sbjct: 498 GRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVL 557
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
SAC+ L + G +HG++ K I +D F + LIDMYGKCG++ + ++F M ++N
Sbjct: 558 SACASLPAIYYGKEIHGVVIKGPI-RADLFAESALIDMYGKCGNLEWAHRVFESMPEKNE 616
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
++W ++I++ G G + ++ R M+ GFK D V +A+++AC H G V+EG+ LF
Sbjct: 617 VSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRC 676
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
M Y + P M+H+ C+VDL R G L +A ++I MPF P+A IW L C+ R
Sbjct: 677 MTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHR 733
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 144/558 (25%), Positives = 273/558 (48%), Gaps = 47/558 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP--VEG 58
M +R+ V +N ++ Y + G V A+ +F M G EP T LS + G
Sbjct: 207 MAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFG 266
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL +K GL ++ V L+ +Y + CLD+ +F MPR LVTWN ++S +
Sbjct: 267 VQLHTLAVKYGLE-SEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQ 325
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GFV+ + LFC++ +S + + V ++ L++ G+++HG +++N ++ +
Sbjct: 326 NGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFL 385
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++LV++YF+C + A+ ++ + DVV +T+I + +A++++ + +
Sbjct: 386 VSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGI 445
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN V+ +CA + LG+ +H+ +KNA E +V SAL+D YAKC L+ +H
Sbjct: 446 RPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHY 505
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
FS+IS K+ V+WN++I +A P ++ L E+ G + + T S VL + +
Sbjct: 506 IFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPA 565
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTS-YAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ ++H ++I+ G + +A+S LI
Sbjct: 566 IYYGKEIHGVVIK----------GPIRADLFAESALID---------------------- 593
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G ++ + + VSWN +IA+ G KE + L ++M+ D+
Sbjct: 594 -MYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHV 652
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIF 530
TF++L+SAC+ + G L + + I+ + F C ++D+Y + G + ++++
Sbjct: 653 TFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFAC--MVDLYSRAGKLDKAMELI 710
Query: 531 NEMTDR-NVITWTALISA 547
+M + + W AL+ A
Sbjct: 711 VDMPFKPDAGIWGALLHA 728
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 79/187 (42%), Gaps = 8/187 (4%)
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD +++L C +L+LG +HG + ++DT + L+ MY +V
Sbjct: 38 PDR-RLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVA 96
Query: 529 IFNEMTDRN---VITWTALISALGLNGFAQRALEKFREM--EFLGFKPDRVALIAVLTAC 583
+F+ + + W LI L + G + AL + +M PD V+ +C
Sbjct: 97 VFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSC 156
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
G + G L R R+ G++ +M ++ + G L +A ++ M + ++
Sbjct: 157 AALGAIALG-RLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMA-ERDCVL 214
Query: 644 WRTFLEG 650
W ++G
Sbjct: 215 WNVMMDG 221
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 194/657 (29%), Positives = 331/657 (50%), Gaps = 41/657 (6%)
Query: 7 VSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQ--FTFGGLL-SCDSLNPVEGAQLQA 63
+ +N +I ++ G+ A+ ++ M P+ T ++ SC +L V +L
Sbjct: 105 LPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVH 164
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+ +D +VG+AL+ +Y G L + F+ MP + V WN ++ + K G V
Sbjct: 165 RTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVG 224
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ LF + S ++ + + E DL G Q+H L +K G + E+ VAN+L+
Sbjct: 225 GAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLL 284
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
+MY +C + A ++F+ + D+V+WN +I ++ +AL L+ M P+
Sbjct: 285 SMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSV 344
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
T V ++ + L GK +H +I+N + D F+ SALVD Y KC ++ A +
Sbjct: 345 TLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAA 404
Query: 304 SNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL---- 358
++V + +I GY + S ++ + LL+ +PN T + VL + + L
Sbjct: 405 RAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQ 464
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
++H ++R YE YV +LM YAK
Sbjct: 465 EIHGYVLRNAYEGKCYVESALMDMYAK--------------------------------C 492
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
G+ + + + S++ D V+WN +I++ + NG+ +E L+LF+ M I +N T S L
Sbjct: 493 GRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSAL 552
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
SAC+ L + G +HG+I K I +D F + LIDMY KCG++ ++++F M D+N
Sbjct: 553 SACASLPAIYYGKEIHGVIIKGPI-KADIFAESALIDMYAKCGNMELALRVFEFMPDKNE 611
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
++W ++ISA G +G + ++ M+ G+KPD V +A+++AC H GLV EG++LF+
Sbjct: 612 VSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQC 671
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
M + Y + P M+H+ C+VDL R G L +A + I MPF P+A IW L C+ R
Sbjct: 672 MTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHR 728
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 142/473 (30%), Positives = 248/473 (52%), Gaps = 13/473 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
MP R+ V +N ++ Y + G V A+R+F M G EP T LS + + G
Sbjct: 202 MPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSG 261
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL + +K GL + V LL +Y + CLD+ +FE +PR LVTWN ++S +
Sbjct: 262 VQLHSLAVKCGLE-QEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQ 320
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G +++ + LFC+++RS + V ++ L++ L+ G+++HG +I+N + +
Sbjct: 321 NGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFL 380
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++LV++YF+C + +A ++ DVV +T+I + KAL+++ + +
Sbjct: 381 VSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCI 440
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T V+ +CA + LG+ IH V++NA E +V SAL+D YAKC L+ +H
Sbjct: 441 KPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHY 500
Query: 299 CFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
FS++S K+ V+WN++I ++ P ++ L ++ G + N T S L + +
Sbjct: 501 IFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPA 560
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ ++H +II+ + + +L+ YAK G + AL V + V N I
Sbjct: 561 IYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALR-VFEFMPDKNEVSWNSIIS 619
Query: 414 IYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
Y G E+V L +++ +PD V++ +I+ACAH G +E L+LF+ M
Sbjct: 620 AYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCM 672
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 146/601 (24%), Positives = 270/601 (44%), Gaps = 39/601 (6%)
Query: 58 GAQLQASVLKNGLFCADAFVG--TALLGLYGRHGCLDEVVSVFEDMPRK---SLVTWNSI 112
G Q+ A + +G + T LLG+Y + V+VF +PR S + WN +
Sbjct: 51 GLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWL 110
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFV--GVIHGLSNEQDLEFGEQIHGLVIKN 170
+ F G + + ++ A + + V+ + + G +H
Sbjct: 111 IRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARAT 170
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
G ++ V ++L+ MY + A F + RD V WN ++ ++ + G A+ L+
Sbjct: 171 GLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLF 230
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
M V PN T ++ CA + + G +H+ +K LE +V V + L+ YAKC
Sbjct: 231 RNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKC 290
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL 349
L+ A F + ++V+WN +I G ++ L ++L+ G RP+ T +L
Sbjct: 291 RCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLL 350
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ L L+ L + G E + Y++ ++ + DA V+AL
Sbjct: 351 PA-----LTDLNGL--KQGKEVHGYII--------RNCVHMDAF-LVSAL---------- 384
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
IY + L D+V + VI+ NG ++ L++F+Y+ I P
Sbjct: 385 --VDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKP 442
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ T S+L AC+ + L LG +HG + + +V + L+DMY KCG + S I
Sbjct: 443 NAVTVASVLPACASISALPLGQEIHGYVLRNA-YEGKCYVESALMDMYAKCGRLDLSHYI 501
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F++M+ ++ +TW ++IS+ NG Q AL+ FR+M G K + V + + L+AC +
Sbjct: 502 FSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAI 561
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
G E+ + + ++ ++ ++D+ + G+++ A ++ MP N + W + +
Sbjct: 562 YYGKEIHGVIIKG-PIKADIFAESALIDMYAKCGNMELALRVFEFMP-DKNEVSWNSIIS 619
Query: 650 G 650
Sbjct: 620 A 620
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/526 (24%), Positives = 224/526 (42%), Gaps = 56/526 (10%)
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
+ + ++ G + L G QIH + +G L ++ + ++ + G++ + F
Sbjct: 31 SADRLLALLRGCVSAPHLPLGLQIHARAVVSG----ALSNHNHLALHTRLLGMYVLARRF 86
Query: 200 KDV----------EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP--NQTTFVY 247
+D + WN +I + + A+ Y++M P + T Y
Sbjct: 87 RDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPY 146
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
V+ SCA L LG+ +H L DV+VGSAL+ Y+ L A F + ++
Sbjct: 147 VVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRD 206
Query: 308 IVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA----FQLLQLHC 362
V WN ++ GY L +++ G PN T + L A +QLH
Sbjct: 207 CVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHS 266
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
L ++ G E V +L++ YAK + DA
Sbjct: 267 LAVKCGLEQEVAVANTLLSMYAKCRCLDDAW----------------------------- 297
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
+L L R D+V+WN +I+ C NG E L LF M + PD+ T VSLL A +
Sbjct: 298 ---RLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALT 354
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
L L G +HG I + + D F+ + L+D+Y KC + ++ +++ +V+ +
Sbjct: 355 DLNGLKQGKEVHGYIIRN-CVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGS 413
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
+IS LNG +++AL+ FR + KP+ V + +VL AC + G E+ + R+
Sbjct: 414 TVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRN 473
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
E + ++D+ + G L + I + M + + W + +
Sbjct: 474 -AYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSL-KDEVTWNSMI 517
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 198/664 (29%), Positives = 341/664 (51%), Gaps = 51/664 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQL 61
R+ S+ +II+AY+ G + A+ MF M G TF +L +C L + +G +
Sbjct: 91 RDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A ++++GL + + LL +YG GC+ + +FE M R LV+WN+ ++ + G
Sbjct: 151 HAWIVESGLK-GKSVLANLLLHIYGSCGCVASAMLLFEKMER-DLVSWNAAIAANAQSGD 208
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + LF R ++ + + ++ L+ + + IH +V ++G + L+V+ +
Sbjct: 209 LGIALELF---QRMQLEGVRPARITLVIALTVCATIRQAQAIHFIVRESGLEQTLVVSTA 265
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L + Y + ++ A+++F RDVVSWN ++GA A+ + +A L+ RM + + P+
Sbjct: 266 LASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPS 325
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ T V C+ L+ G+ IH ++ L+ D+ +G+AL+D Y +C + E A F
Sbjct: 326 KVTLVNASTGCSSLR---FGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFK 382
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA------ 354
I N VSWN +I G + K L + +QL G P T+ ++L + +
Sbjct: 383 RIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEAR 441
Query: 355 --FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ +LH I+ GY + + +++ YA G I +A A + R +
Sbjct: 442 AMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAA-----SFQRGAME----- 491
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+R D+VSWN +I++ + +G K L F+ M + P+
Sbjct: 492 -------------------DRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQI 532
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T V++L AC+ L G +H ++ + + S+ FV L MYG+CGS+ S+ +IF +
Sbjct: 533 TCVAVLDACAGAAALTEGEIVHDHLRHSGM-ESNLFVATALASMYGRCGSLESAREIFEK 591
Query: 533 MT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ +R+V+ + A+I+A NG A AL+ F M+ G +PD + ++VL+AC HGGL E
Sbjct: 592 VAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADE 651
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G E+F M +SYG+ P DHY C VD+L R G L +AE++I M P L+W+T L C
Sbjct: 652 GWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGAC 711
Query: 652 QRCR 655
++ R
Sbjct: 712 RKYR 715
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 164/601 (27%), Positives = 286/601 (47%), Gaps = 51/601 (8%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G ++ A ++ GL + +G LL LY + L +V VF + + +W +I++ +
Sbjct: 47 QGRRIHARIVSLGL---EEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAY 103
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+HG + + +F + + V +F+ V+ + DL G IH ++++G +
Sbjct: 104 TEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKS 163
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++AN L+++Y C + SA +F+ +E RD+VSWN I A A+S + G ALEL+ RM ++
Sbjct: 164 VLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELFQRMQLE 222
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P + T V + CA ++ + ++IH V ++ LE + V +AL YA+ +L A
Sbjct: 223 GVRPARITLVIALTVCATIRQA---QAIHFIVRESGLEQTLVVSTALASAYARLGHLYQA 279
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAF 355
F + +++VSWNA++ YA + LL +L G P++ T
Sbjct: 280 KEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTL---------- 329
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
V S S + G + A L+ R +V N + +Y
Sbjct: 330 -------------------VNASTGCSSLRFGRMIHGCALEKGLD--RDIVLGNALLDMY 368
Query: 416 NRTGQYNETVKLLSQLERP-DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
R G E L ++ P + VSWN +IA + G K +ELF+ M+ + P T+
Sbjct: 369 TRCGSPEEARHLFKRI--PCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATY 426
Query: 475 VSLLSACS----KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
++LL A + + +A G LH I +S+ + ++ MY CG+I + F
Sbjct: 427 LNLLEAVASNPEEARAMAEGRKLHSRIVSCG-YASEPAIGTAVVKMYASCGAIDEAAASF 485
Query: 531 NE--MTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
M DR +V++W A+IS+L +G +RAL FR M+ G P+++ +AVL AC
Sbjct: 486 QRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAA 545
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
+ EG E+ R G+E + + + R G L+ A +I + + +I+
Sbjct: 546 ALTEG-EIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAM 604
Query: 648 L 648
+
Sbjct: 605 I 605
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 222/500 (44%), Gaps = 47/500 (9%)
Query: 135 SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
S A + V ++ +++ L G +IH ++ G + EL N L+ +Y +C +
Sbjct: 23 SSGATRPAHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGD 80
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
E++F +E+RD SW TII A E +A+ ++ RM + V + TF+ V+ +CA
Sbjct: 81 VEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACAR 140
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
L + G+SIHA ++++ L+ + + L+ Y C + A L F ++ +++VSWNA
Sbjct: 141 LGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAA 199
Query: 315 ILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE 373
I A L + +QL G RP T L + Q I+R
Sbjct: 200 IAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQAQAIHFIVR------- 252
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
+SGL + +V + +A Y R G + ++ +
Sbjct: 253 -----------ESGL-------------EQTLVVSTALASAYARLGHLYQAKEVFDRAAE 288
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
D+VSWN ++ A A +G E LF M I P T V+ + CS +L G +
Sbjct: 289 RDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCS---SLRFGRMI 345
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
HG + + + D + N L+DMY +CGS + +F + N ++W +I+ G
Sbjct: 346 HGCALE-KGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC-NAVSWNTMIAGSSQKGQ 403
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTAC----RHGGLVREGMELFERM-NRSYGVEPE 608
+RA+E F+ M+ G P R + +L A + EG +L R+ + Y EP
Sbjct: 404 MKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPA 463
Query: 609 MDHYHCVVDLLVRYGHLKEA 628
+ VV + G + EA
Sbjct: 464 IG--TAVVKMYASCGAIDEA 481
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 230/455 (50%), Gaps = 42/455 (9%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEGAQL 61
+R+VVS+N+++ AY++ G++ +A +F M++ G P++ T C SL G +
Sbjct: 288 ERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSLRF--GRMI 345
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
L+ GL D +G ALL +Y R G +E +F+ +P + V+WN++++ + G
Sbjct: 346 HGCALEKGLD-RDIVLGNALLDMYTRCGSPEEARHLFKRIPCNA-VSWNTMIAGSSQKGQ 403
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGL-SNEQD---LEFGEQIHGLVIKNGFDYELL 177
++ + LF + +A ++++ ++ + SN ++ + G ++H ++ G+ E
Sbjct: 404 MKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPA 463
Query: 178 VANSLVNMYFQCAGIWSAEKMFKD--VEIR-DVVSWNTIIGALAESENFGKALELYLRMS 234
+ ++V MY C I A F+ +E R DVVSWN II +L++ + +AL + RM
Sbjct: 464 IGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMD 523
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ V PNQ T V V+++CAG G+ +H + + +E ++FV +AL Y +C +LE
Sbjct: 524 LHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLE 583
Query: 295 GAHLCFSEIS-NKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A F +++ +++V +NA+I Y+ + ++ L + Q G RP+E +F VL +
Sbjct: 584 SAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSA- 642
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
C + E +E + S+ SY G+ + A++
Sbjct: 643 ---------CSHGGLADEGWE-IFRSMRQSY---GIAPSEDHYACAVD------------ 677
Query: 413 GIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
+ R G + +L+ ++ +P ++ W ++ AC
Sbjct: 678 -VLGRAGWLADAEELIRCMDVKPTVLVWKTLLGAC 711
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 196/670 (29%), Positives = 345/670 (51%), Gaps = 56/670 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFL-YMINRGFEPTQFTFGGLL-SCDSLNPVEG 58
MP+RN+V++++++SA + G+ E++L +FL + R P ++ + +C L+ G
Sbjct: 105 MPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLD---G 161
Query: 59 A------QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
+ QLQ+ ++K+ F D +VGT L+ Y + G +D VF+ +P KS VTW ++
Sbjct: 162 SGRWMVFQLQSFLVKSR-FDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTM 220
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+S K G + LF +L+ V V+ S LE G+QIH +++ G
Sbjct: 221 ISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGH 280
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ + + N L++ Y +C + +A K+F + ++++SW T++ ++ +A+EL+
Sbjct: 281 EKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTS 340
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M + P+ ++ SCA L G +HA IK L D +V ++L+D YAKCD
Sbjct: 341 MPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC 400
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ----LGYRPNEFTFSHV 348
L A F + ++V +NA+I GY+ + + + + RP+ TF +
Sbjct: 401 LTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSL 460
Query: 349 LRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
LR+S + L Q+H L+ + G + +A S LI+
Sbjct: 461 LRASASLTSLGLSKQIHGLMFKFGLN---------LDIFAGSALIA-------------- 497
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+Y+ ++ + +++ D+V WN + + + +E L LF ++
Sbjct: 498 ---------VYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQL 548
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLH-GLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+R PD +TFV +++A L +L LG H L+K+ + + ++ N L+DMY KCGS
Sbjct: 549 SRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRG--LECNPYITNALLDMYAKCGSP 606
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ K F+ R+V+ W ++IS+ +G ++AL+ +M G +P+ + + VL+AC
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSAC 666
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
H GLV +G++ FE M R +G+EPE +HY C+V LL R G L EA ++I MP P A++
Sbjct: 667 SHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIV 725
Query: 644 WRTFLEGCQR 653
WR+ L GC +
Sbjct: 726 WRSLLSGCAK 735
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 150/568 (26%), Positives = 259/568 (45%), Gaps = 45/568 (7%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D ++ L+ LY R G + VFE MP ++LVTW+++VS HGF E+ + +F +
Sbjct: 78 DTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFW 137
Query: 134 RSEVALTE----SSFVGVIHGLSNE-QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
R+ SSF+ GL + + F Q+ ++K+ FD ++ V L++ Y +
Sbjct: 138 RTRKNSPNEYILSSFIQACSGLDGSGRWMVF--QLQSFLVKSRFDRDVYVGTLLIDFYLK 195
Query: 189 CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYV 248
I A +F + + V+W T+I + +L+L+ ++ V P+ V
Sbjct: 196 EGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTV 255
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+++C+ L GK IHA +++ E D + + L+D Y KC + AH F + NKNI
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNI 315
Query: 309 VSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCL 363
+SW L+ GY S ++ L + + G +P+ F S +L S + L Q+H
Sbjct: 316 ISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAY 375
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
I+ N YV SL+ YAK +++A V+ +I G Y+R G
Sbjct: 376 TIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEG-YSRLG---- 430
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
W + + L +F MR I P TFVSLL A +
Sbjct: 431 -------------TQWEL-----------HDALNIFHDMRFRLIRPSLLTFVSLLRASAS 466
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
L +L L +HGL+ K ++ D F + LI +Y C + S +F+EM ++++ W +
Sbjct: 467 LTSLGLSKQIHGLMFKFG-LNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNS 525
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF-ERMNRS 602
+ S + AL F E++ +PD + ++TA + ++ G E + + R
Sbjct: 526 MFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRG 585
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
P + + ++D+ + G ++A K
Sbjct: 586 LECNPYIT--NALLDMYAKCGSPEDAHK 611
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 244/478 (51%), Gaps = 42/478 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP++N++S+ +++S Y + ++A+ +F M G +P F +L SC SL+ +E G
Sbjct: 310 MPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFG 369
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV---SI 115
Q+ A +K L D++V +L+ +Y + CL E VF+ +V +N+++ S
Sbjct: 370 TQVHAYTIKANL-GNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSR 428
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
G + D + +F ++ + + +FV ++ ++ L +QIHGL+ K G + +
Sbjct: 429 LGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLD 488
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII-GALAESENFGKALELYLRMS 234
+ ++L+ +Y C + + +F +++++D+V WN++ G + +SEN +AL L+L +
Sbjct: 489 IFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSEN-EEALNLFLELQ 547
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ P++ TFV ++ + L + LG+ H +++K LEC+ ++ +AL+D YAKC + E
Sbjct: 548 LSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPE 607
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSL 353
AH F +++++V WN++I YA+ ++E ++ G PN TF VL +
Sbjct: 608 DAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSAC- 666
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
H ++ G + +E +L + G+ + +V +
Sbjct: 667 ------SHAGLVEDGLKQFELML--------RFGIEPETEHYVC-------------MVS 699
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ R G+ NE +L+ ++ +P + W +++ CA G+ +EL +Y I D
Sbjct: 700 LLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGN----VELAEYAAEMAILSD 753
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 207/433 (47%), Gaps = 48/433 (11%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
+HG +I +G + + ++N L+N+Y + G+ A K+F+ + R++V+W+T++ A
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 223 FGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGK----SIHAKVIKNALECDV 277
+ ++L ++L PN+ I +C+GL S G+ + + ++K+ + DV
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGS--GRWMVFQLQSFLVKSRFDRDV 183
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQL 336
+VG+ L+DFY K N++ A L F + K+ V+W +I G S S+ L +L++
Sbjct: 184 YVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEG 243
Query: 337 GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
P+ + S VL + L Q+H I+R G+E ++ L+ SY K G + A
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAA 303
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
KL + +I+SW +++ N +
Sbjct: 304 H--------------------------------KLFDGMPNKNIISWTTLLSGYKQNSLH 331
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
KE +ELF M + PD + S+L++C+ L L G+ +H K + +D++V N
Sbjct: 332 KEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKAN-LGNDSYVTNS 390
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI---SALGLNGFAQRALEKFREMEFLGF 569
LIDMY KC + + K+F+ +V+ + A+I S LG AL F +M F
Sbjct: 391 LIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLI 450
Query: 570 KPDRVALIAVLTA 582
+P + +++L A
Sbjct: 451 RPSLLTFVSLLRA 463
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 87/168 (51%), Gaps = 16/168 (9%)
Query: 494 HGLIKKTEIISS---DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
H ++ I+S DT++ N+L+++Y + G + + K+F +M +RN++TW+ ++SA
Sbjct: 63 HNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNH 122
Query: 551 NGFAQRALEKFREMEFLGFK---PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
+GF + +L F ++F + P+ L + + AC GL G + ++ +S+ V+
Sbjct: 123 HGFYEESLVVF--LDFWRTRKNSPNEYILSSFIQAC--SGLDGSGRWMVFQL-QSFLVKS 177
Query: 608 EMDHYHCV----VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
D V +D ++ G++ A + +P + + W T + GC
Sbjct: 178 RFDRDVYVGTLLIDFYLKEGNIDYARLVFDALP-EKSTVTWTTMISGC 224
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 200/657 (30%), Positives = 325/657 (49%), Gaps = 41/657 (6%)
Query: 7 VSFNSIISAYSRCGYVEDALRMFLYMINRGFEP--TQFTFGGLL-SCDSLNPVEGAQLQA 63
+ +N +I + G AL +L M P TF ++ SC +L + +L
Sbjct: 110 LPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVH 169
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+ D FVG+AL+ +Y G L + VF+ M + V WN ++ + K G V
Sbjct: 170 RTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVS 229
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ LF ++ S ++ + + E DL FG Q+H L +K G + E+ VAN+LV
Sbjct: 230 SAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLV 289
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
+MY +C + K+F + D+V+WN +I ++ +AL L+ M + P+
Sbjct: 290 SMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSV 349
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
T V ++ + L GK +H +++N + DVF+ SALVD Y KC + A +
Sbjct: 350 TLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSS 409
Query: 304 SNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL---RSSLAFQLLQ 359
++V + +I GY + S ++ + LL+ G RPN + VL S A +L Q
Sbjct: 410 KAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQ 469
Query: 360 -LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
LH ++ YE YV +LM YAK
Sbjct: 470 ELHSYALKNAYEGRCYVESALMDMYAK--------------------------------C 497
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
G+ + + + S++ D V+WN +I++ A NG+ +E L LF+ M + N T S+L
Sbjct: 498 GRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVL 557
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
SAC+ L + G +HG++ K I +D F + LIDMYGKCG++ + ++F M ++N
Sbjct: 558 SACASLPAIYYGKEIHGVVIKGPI-RADLFAESALIDMYGKCGNLEWAHRVFESMPEKNE 616
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
++W ++I++ G G + ++ R M+ GFK D V +A+++AC H G V+EG+ LF
Sbjct: 617 VSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRC 676
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
M Y + P M+H+ C+VDL R G L +A ++I MPF P+A IW L C+ R
Sbjct: 677 MTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHR 733
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 144/558 (25%), Positives = 273/558 (48%), Gaps = 47/558 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP--VEG 58
M +R+ V +N ++ Y + G V A+ +F M G EP T LS + G
Sbjct: 207 MAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFG 266
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL +K GL ++ V L+ +Y + CLD+ +F MPR LVTWN ++S +
Sbjct: 267 VQLHTLAVKYGLE-SEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQ 325
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GFV+ + LFC++ +S + + V ++ L++ G+++HG +++N ++ +
Sbjct: 326 NGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFL 385
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++LV++YF+C + A+ ++ + DVV +T+I + +A++++ + +
Sbjct: 386 VSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGI 445
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN V+ +CA + LG+ +H+ +KNA E +V SAL+D YAKC L+ +H
Sbjct: 446 RPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHY 505
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
FS+IS K+ V+WN++I +A P ++ L E+ G + + T S VL + +
Sbjct: 506 IFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPA 565
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTS-YAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ ++H ++I+ G + +A+S LI
Sbjct: 566 IYYGKEIHGVVIK----------GPIRADLFAESALID---------------------- 593
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G ++ + + VSWN +IA+ G KE + L ++M+ D+
Sbjct: 594 -MYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHV 652
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIF 530
TF++L+SAC+ + G L + + I+ + F C ++D+Y + G + ++++
Sbjct: 653 TFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFAC--MVDLYSRAGKLDKAMELI 710
Query: 531 NEMTDR-NVITWTALISA 547
+M + + W AL+ A
Sbjct: 711 VDMPFKPDAGIWGALLHA 728
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 79/187 (42%), Gaps = 8/187 (4%)
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD +++L C +L+LG +HG + ++DT + L+ MY +V
Sbjct: 38 PDR-RLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVA 96
Query: 529 IFNEMTDRN---VITWTALISALGLNGFAQRALEKFREM--EFLGFKPDRVALIAVLTAC 583
+F+ + + W LI L + G + AL + +M PD V+ +C
Sbjct: 97 VFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSC 156
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
G + G L R R+ G++ +M ++ + G L +A ++ M + ++
Sbjct: 157 AALGAIALG-RLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMA-ERDCVL 214
Query: 644 WRTFLEG 650
W ++G
Sbjct: 215 WNVMMDG 221
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 195/646 (30%), Positives = 329/646 (50%), Gaps = 46/646 (7%)
Query: 20 GYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQASVLKNGLFCADAFVG 78
G + A+ +M+++G P T+ L C + L L D+
Sbjct: 45 GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104
Query: 79 TALLGLYGRHGCLDEVVSVFEDM-PRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEV 137
+L+ LY + G ++ S+F M + L++W+++VS F + + F +++ +
Sbjct: 105 NSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164
Query: 138 ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELLVANSLVNMYFQCAG-IWSA 195
E F S + + G+ I G VIK G+ ++ V L++M+ + G + SA
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
K+F+ + R+ V+W +I L + G+A++L+L M P++ T VI++CA +
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANM 284
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD---NLEGAHLCFSEISNKNIVSWN 312
+ +LG+ +H++ I++ L D VG L++ YAKC ++ A F +I + N+ SW
Sbjct: 285 ELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT 344
Query: 313 ALILGYASKS--SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIR 366
A+I GY K ++ L ++ PN FTFS L++ L Q+ ++
Sbjct: 345 AMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVK 404
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
+G+ + V SL++ YA R+G+ ++ K
Sbjct: 405 LGFSSVNCVANSLISMYA--------------------------------RSGRIDDARK 432
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
L +++S+N VI A A N + +E LELF + + +TF SLLS + +
Sbjct: 433 AFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGT 492
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
+ G +H + K+ + + + VCN LI MY +CG+I S+ ++F +M DRNVI+WT++I+
Sbjct: 493 IGKGEQIHARVIKSGLKLNQS-VCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIIT 551
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
+GFA +ALE F +M G +P+ V IAVL+AC H GLV EG + F+ M +GV
Sbjct: 552 GFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVI 611
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
P M+HY C+VD+L R G L EA + I +MP+ +AL+WRTFL C+
Sbjct: 612 PRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACR 657
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 247/469 (52%), Gaps = 40/469 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+RN V++ +I+ + GY +A+ +FL MI G+EP +FT G++S C ++ + G
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLG 290
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGR---HGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
QL + +++GL D VG L+ +Y + G + +F+ + ++ +W ++++
Sbjct: 291 QQLHSQAIRHGL-TLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITG 349
Query: 116 F-GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ K G+ E+ + LF ++ + V +F + +N L GEQ+ +K GF
Sbjct: 350 YVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSS 409
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
VANSL++MY + I A K F + ++++S+NT+I A A++ N +ALEL+ +
Sbjct: 410 VNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIE 469
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ + TF +++ A + G+ IHA+VIK+ L+ + V +AL+ Y++C N+E
Sbjct: 470 DQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIE 529
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F ++ ++N++SW ++I G+A T ++ L ++L+ G RPNE T+ VL +
Sbjct: 530 SAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSAC- 588
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
H ++ G+++++ + Y + G+ IPR A I+
Sbjct: 589 ------SHVGLVNEGWKHFK-------SMYTEHGV------------IPRMEHYACIV-D 622
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKY 461
I R+G +E ++ ++ + + D + W + AC +G+ LEL K+
Sbjct: 623 ILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGN----LELGKH 667
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 145/599 (24%), Positives = 267/599 (44%), Gaps = 93/599 (15%)
Query: 7 VSFNSIISAYSRCGYVED--------------------------------ALRMFLYMIN 34
V+ NS+IS YS+CG E AL F+ MI
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 35 RGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLY--GRHGC 90
G+ P ++ F +C + V G + V+K G +D VG L+ ++ GR G
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGR-GD 220
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG 150
L VFE MP ++ VTW +++ + G+ + + LF +++ S + GVI
Sbjct: 221 LVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISA 280
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA---GIWSAEKMFKDVEIRDV 207
+N + L G+Q+H I++G + V L+NMY +C+ + +A K+F + +V
Sbjct: 281 CANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV 340
Query: 208 VSWNTIIGALAESENFG-KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
SW +I + + +AL+L+ M + V PN TF + +CA L +G+ +
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPT 325
+K V ++L+ YA+ ++ A F + KN++S+N +I YA +S
Sbjct: 401 HAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEE 460
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMT 381
++ L E+ G + FTF+ +L + + + Q+H +I+ G + + V +L++
Sbjct: 461 ALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALIS 520
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
Y++ G I A ++ +E +++SW
Sbjct: 521 MYSRCGNIESAF--------------------------------QVFEDMEDRNVISWTS 548
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG-------SSLH 494
+I A +G + LELF M + P+ T++++LSACS + + G + H
Sbjct: 549 IITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEH 608
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNG 552
G+I + E + C ++D+ G+ GS+ +++ N M + + + W + A ++G
Sbjct: 609 GVIPRME-----HYAC--IVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHG 660
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 4/199 (2%)
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
+NG + + ++M +PD T+ L C + + +G+ +H + +++ + D+
Sbjct: 43 NNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSD-LQLDS 101
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISALGLNGFAQRALEKFREMEF 566
N LI +Y KCG + IF M + R++I+W+A++S N RAL F +M
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR-YGHL 625
G+ P+ A AC V G +F + ++ ++ ++ ++D+ V+ G L
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 626 KEAEKIITTMPFPPNALIW 644
A K+ MP NA+ W
Sbjct: 222 VSAFKVFEKMP-ERNAVTW 239
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 179/649 (27%), Positives = 336/649 (51%), Gaps = 38/649 (5%)
Query: 8 SFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQASV 65
S+N+II+ S G D L + M++ P TF L+ +C SL+ G V
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
+ +G + +D+++ T+L+ Y + G VF+ M +++V W +++ + + G +
Sbjct: 75 IVDG-YSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVA 133
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
++ + R + + + +G++ G+ +L + +H VI+ GF ++ +ANS++N+
Sbjct: 134 FSMYNIMRRQGIQPSSVTMLGLLSGV---LELVHLQCLHACVIQYGFGSDVALANSMLNV 190
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C + A+ +F+ ++ RDV+SWN+++ A+ N + L+L +RM D + P+Q TF
Sbjct: 191 YCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTF 250
Query: 246 VYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
++ S A +Q+ + +GK +H +++ LE D + ++L+ Y KC N+ A F +
Sbjct: 251 GSLV-SAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMM 309
Query: 305 NKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCL 363
+K+++SW A+I G + ++ + +L+ P+ T + VL + L
Sbjct: 310 HKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPL--- 366
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
G + Y+L + L+IP N + +Y + G +
Sbjct: 367 ----GTSVHGYILRQRIK-----------------LDIP----SQNSLVTMYAKCGHLEQ 401
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
+ + ++ R DIVSWN +++ A NG + L LF MR AR PD+ T VSLL AC+
Sbjct: 402 SCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACAS 461
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
+ L G +H + K+ + + L+DMY KCG +GS+ K F+ M +++++W++
Sbjct: 462 IGALHQGKWIHNFVTKS-CLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSS 520
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSY 603
+I+ G +G + AL + + G +P+ V +++L+AC H GLV +G+ F M + +
Sbjct: 521 IIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDF 580
Query: 604 GVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G+EP ++H C+VDLL R G ++EA M P+ + L+ C+
Sbjct: 581 GIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACR 629
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 240/483 (49%), Gaps = 31/483 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M DRNVV + ++I Y+R G + A M+ M +G +P+ T GLLS L V
Sbjct: 109 MDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLS-GVLELVHLQC 167
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L A V++ G F +D + ++L +Y + G +++ ++FE M + +++WNS+VS + + G
Sbjct: 168 LHACVIQYG-FGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLG 226
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + + L + + + +F ++ + + L G+ +HG +++ G + + +
Sbjct: 227 NIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIET 286
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL+ MY +C + SA ++F+ + +DV+SW +I L +++ A+ ++ RM V P
Sbjct: 287 SLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMP 346
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T V+ +CA L + LG S+H +++ ++ D+ ++LV YAKC +LE + F
Sbjct: 347 STATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVF 406
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
+S ++IVSWNA++ G+A LL E+ + RP+ T +L++ + L
Sbjct: 407 DRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALH 466
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
G + ++ + + TAL +Y++ G
Sbjct: 467 ----------------QGKWIHNFVTKSCLGPCILIDTAL------------VDMYSKCG 498
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
K ++ + D+VSW+ +IA +G + L ++ I P++ ++S+LS
Sbjct: 499 DLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILS 558
Query: 480 ACS 482
ACS
Sbjct: 559 ACS 561
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 236/471 (50%), Gaps = 19/471 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
M R+V+S+NS++S Y++ G + + L++ + M G EP Q TFG L+S ++ G
Sbjct: 207 MDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVG 266
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +L+ GL D+ + T+L+G+Y + G ++ +FE M K +++W +++S +
Sbjct: 267 KMVHGHILRAGLE-QDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQ 325
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + + +F +++S V + ++ V+ + G +HG +++ ++
Sbjct: 326 NDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPS 385
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSLV MY +C + + +F + RD+VSWN I+ A++ + KAL L+ M
Sbjct: 386 QNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQ 445
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T V ++ +CA + GK IH V K+ L + + +ALVD Y+KC +L A
Sbjct: 446 RPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQK 505
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL----RSSL 353
CF + +++VSW+++I GY S T++ + + L G +PN + +L + L
Sbjct: 506 CFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGL 565
Query: 354 AFQLLQL-HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
Q L H + G E ++ +++G + +A +F + P+ P+ +
Sbjct: 566 VDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRM-FPK---PSMDVL 621
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
GI + + +E DIV+ IVI A+ G+Y ++ + M+
Sbjct: 622 GILL------DACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMK 666
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 6/217 (2%)
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
P S+N +I + G + +VL + M + PD +TF SL+ AC+ L + G S
Sbjct: 11 PATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSF 70
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H + + SSD+++ LI+ Y K G S+ K+F+ M DRNV+ WT +I G
Sbjct: 71 HQRV-IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGE 129
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
A + M G +P V ++ +L+ G L ++ YG ++ +
Sbjct: 130 HDVAFSMYNIMRRQGIQPSSVTMLGLLS----GVLELVHLQCLHACVIQYGFGSDVALAN 185
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++++ + G +++A+ + M + + W + + G
Sbjct: 186 SMLNVYCKCGRVEDAQALFELMD-ARDVISWNSLVSG 221
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 198/675 (29%), Positives = 345/675 (51%), Gaps = 52/675 (7%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL--SCDSLNPVEGA 59
P+R+V+S++++I+AYSRCG A +F M+ G +P F+ LL SC +
Sbjct: 82 PNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCR 141
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL--VTWNSIVSIFG 117
QL ++ G F D+ + A + +Y R G L++ VF++ +L + WNSI++ +
Sbjct: 142 QLHGWSIRTG-FGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYI 200
Query: 118 KHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
HG + + LFC++V VA TE ++ V++ + + ++G +HG +IK G +
Sbjct: 201 FHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATN 260
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SV 235
L NSLV Y +C + A ++F+ + +DVVSWN +I A + AL L+ RM V
Sbjct: 261 L-WNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKV 319
Query: 236 DI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ V PN+ TF+ ++++ +GL G+ IHA + + +LE D + ++L+ FY+KC +
Sbjct: 320 EPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVG 379
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFT----FSHVL 349
A F + ++I+SWN+++ GY F + + + L G P+ + F+
Sbjct: 380 KAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAAS 439
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
R S + R G E + Y+L +T + +V +N
Sbjct: 440 RDSSGL-------IYFRRGKEIHGYILRR-----------------ITPGGVSLSV--SN 473
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
I +Y + + + K+ ++ D SWN ++ + N +++VL +F +
Sbjct: 474 AILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPL 533
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKK----TEIISSDTFVC--NMLIDMYGKCGSI 523
D+ + LL++C +L +L LG H ++ K + D+ + N LI MY KCGSI
Sbjct: 534 DHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSI 593
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ ++F +M ++V +WTA+I+ +G A AL+ F M+ G KP++V +A+L AC
Sbjct: 594 KDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMAC 653
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT-----TMPFP 638
HGGLV+EG F+ M YG+ P ++HY C++DL R G A+ ++ P+
Sbjct: 654 AHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYH 713
Query: 639 PNAL-IWRTFLEGCQ 652
+ L +W+ L C
Sbjct: 714 DDILNLWKVLLGACH 728
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 134/585 (22%), Positives = 257/585 (43%), Gaps = 55/585 (9%)
Query: 88 HGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGV 147
H L +F++ P + +++W+++++ + + G LF +++ + S +
Sbjct: 68 HERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASL 127
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI--R 205
+ + ++ Q+HG I+ GF + + + + MY +C + A+++F + +
Sbjct: 128 LKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLAL 187
Query: 206 DVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
D++ WN+II A + + L L+ +M SV +V P + T+ V+N+C G +
Sbjct: 188 DILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMV 247
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK--- 321
H ++IK LE S LV FY KC NL+ A F IS K++VSWNA+I +
Sbjct: 248 HGRIIKAGLEATNLWNS-LVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEG 306
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLG 377
+ +F + ++ +PN TF +L + L ++H I R+ E +
Sbjct: 307 ENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITN 366
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
SL+T Y+K + A ++ +L DI+
Sbjct: 367 SLITFYSKCREVGKAR--------------------------------EIFERLLLRDII 394
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK----LCNLALGSSL 493
SWN ++A N ++FK M + I PD+++ + +A S+ L G +
Sbjct: 395 SWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEI 454
Query: 494 HG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
HG ++++ V N ++ MY K I + KIF M +R+ +W A++ N
Sbjct: 455 HGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNA 514
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE--PEMD 610
+ L F ++ GF D V+L +LT+C ++ G + + + + + P D
Sbjct: 515 KFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQD 574
Query: 611 HY----HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ ++ + + G +K+A ++ M + W + GC
Sbjct: 575 SLLSINNALISMYSKCGSIKDAAQVFLKME-RKDVFSWTAMITGC 618
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 213/473 (45%), Gaps = 48/473 (10%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A+++F + RDV+SW+ +I A + NF +A L+ +M + + PN + ++
Sbjct: 74 AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCS 133
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS--NKNIVSWN 312
L + +H I+ D + +A + Y++C LE A F E S +I+ WN
Sbjct: 134 TGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWN 193
Query: 313 ALILGYASKSSPTSIF-LLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYE 370
++I Y + L +++ +G P E T++ V+ + + G E
Sbjct: 194 SIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGS------------SGEE 241
Query: 371 NY-EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
Y V G ++ K+GL A N+ ++V Y + G +L
Sbjct: 242 KYGAMVHGRII----KAGL--------EATNLWNSLVT------FYGKCGNLQHASQLFE 283
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR--IYPDNYTFVSLLSACSKLCNL 487
++ R D+VSWN +IAA G+ + L LF+ M + P+ TF+SLLSA S L L
Sbjct: 284 RISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSAL 343
Query: 488 ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISA 547
G +H I + + DT + N LI Y KC +G + +IF + R++I+W ++++
Sbjct: 344 RCGREIHAHIFRLS-LEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAG 402
Query: 548 LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH--GGLV--REGMELFERMNRSY 603
N R + F+ M G +PD +L + A GL+ R G E+ + R
Sbjct: 403 YEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRR- 461
Query: 604 GVEP---EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ P + + ++ + ++ + +AEKI M ++ W ++G R
Sbjct: 462 -ITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMK-NRDSYSWNAMMDGYSR 512
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M +R+ S+N+++ YSR ED L +FL ++ +GF + LL SC L ++ G
Sbjct: 495 MKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLG 554
Query: 59 AQLQASVLK--NGLFCA--DAF--VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
Q A V K NG C D+ + AL+ +Y + G + + VF M RK + +W ++
Sbjct: 555 KQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAM 614
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI 148
++ HG + + LF + + + +F+ ++
Sbjct: 615 ITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALL 650
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 182/625 (29%), Positives = 313/625 (50%), Gaps = 33/625 (5%)
Query: 31 YMINRGFEPTQFTFGGLL-SC-DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRH 88
Y+ +G + + + LL SC + + G Q+ +L+ G+ + ++ LL LY
Sbjct: 18 YLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVK-PNVYITNTLLKLYAHC 76
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI 148
G ++E +F+ KS+V+WN ++S + G ++ LF + + + + +FV ++
Sbjct: 77 GSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSIL 136
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
S+ L +G +IH V++ G + V N+L++MY +C + A ++F + RD V
Sbjct: 137 SACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEV 196
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SW T+ GA AES ++L+ Y M + V P++ T++ V+++C L GK IHA +
Sbjct: 197 SWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHI 256
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
+++ DV V +AL Y KC + A F +S +++++WN +I G+
Sbjct: 257 VESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAH 316
Query: 329 -LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
+L+ G P+ T++ VL + L G E + AK G
Sbjct: 317 GTFHRMLEEGVAPDRATYTTVLSACARPGGLA-------RGKE--------IHARAAKDG 361
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
L+SD V N + +Y++ G + ++ ++ + D+VSW ++ A
Sbjct: 362 LVSD-------------VRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYA 408
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
E FK M + + T++ +L ACS L G +H + K +++ D
Sbjct: 409 DCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLA-DL 467
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
V N L+ MY KCGS+ ++++F M+ R+V+TW LI LG NG AL+++ M+
Sbjct: 468 AVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSE 527
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G +P+ + VL+ACR LV EG F M++ YG+ P HY C+VD+L R GHL+E
Sbjct: 528 GMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLRE 587
Query: 628 AEKIITTMPFPPNALIWRTFLEGCQ 652
AE +I T+P P+A +W L C+
Sbjct: 588 AEDVILTIPLKPSAAMWGALLAACR 612
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 159/622 (25%), Positives = 306/622 (49%), Gaps = 59/622 (9%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGAQ 60
+++VVS+N +IS Y+ G ++A +F M EP +FTF +LS S V G +
Sbjct: 91 NKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGRE 150
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ V++ GL D VG AL+ +Y + G + + VF+ M + V+W ++ + + G
Sbjct: 151 IHVRVMEAGL-ANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESG 209
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ E+ + + +++ V + +++ V+ + LE G+QIH ++++ + ++ V+
Sbjct: 210 YGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVST 269
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L MY +C A ++F+ + RDV++WNT+I +S +A + RM + V P
Sbjct: 270 ALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAP 329
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
++ T+ V+++CA GK IHA+ K+ L DV G+AL++ Y+K +++ A F
Sbjct: 330 DRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVF 389
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
+ +++VSW L+ YA F ++LQ G + N+ T+ VL++
Sbjct: 390 DRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKAC------- 442
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+ + ++ G E + V+ K+GL++D LA AL +Y + G
Sbjct: 443 SNPVALKWGKEIHAEVV--------KAGLLAD-LAVTNAL------------MSMYFKCG 481
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+ +++ + D+V+WN +I NG E L+ ++ M++ + P+ TFV++LS
Sbjct: 482 SVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLS 541
Query: 480 ACSKLCNL--------ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
AC ++CNL A S +G++ + + C ++D+ + G + + +
Sbjct: 542 AC-RVCNLVEEGRRQFAFMSKDYGIVP-----TEKHYAC--MVDILARAGHLREAEDVIL 593
Query: 532 EMTDR-NVITWTALISALGLN---GFAQRALEKFREMEFLGFKPDRVALIAVLTAC-RHG 586
+ + + W AL++A ++ +RA E L +P L L+A
Sbjct: 594 TIPLKPSAAMWGALLAACRIHCNVEIGERAAE-----HCLKLEPQNAGLYVSLSAIYAAA 648
Query: 587 GLVREGMELFERMNRSYGVEPE 608
G+ R+ +L + M + GV+ E
Sbjct: 649 GMWRDVAKLRKFM-KERGVKKE 669
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 190/362 (52%), Gaps = 4/362 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M R+ VS+ ++ AY+ GY E++L+ + M+ P++ T+ +LS C SL +E G
Sbjct: 190 MASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKG 249
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A ++++ + +D V TAL +Y + G + VFE + + ++ WN+++ F
Sbjct: 250 KQIHAHIVESE-YHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVD 308
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G +E+ F ++ VA +++ V+ + L G++IH K+G ++
Sbjct: 309 SGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRF 368
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+NMY + + A ++F + RDVVSW T++G A+ + ++ + +M V
Sbjct: 369 GNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGV 428
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N+ T++ V+ +C+ GK IHA+V+K L D+ V +AL+ Y KC ++E A
Sbjct: 429 KANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIR 488
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F +S +++V+WN LI G E+++ G RPN TF +VL + L
Sbjct: 489 VFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNL 548
Query: 358 LQ 359
++
Sbjct: 549 VE 550
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 96/179 (53%), Gaps = 2/179 (1%)
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
++ +Y+ D+Y +V LL +C K +LA+G +H I + + + ++ N L+ +
Sbjct: 14 DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGV-KPNVYITNTLLKL 72
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y CGS+ + ++F++ ++++V++W +IS G AQ A F M+ +PD+
Sbjct: 73 YAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTF 132
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+++L+AC ++ G E+ R+ + G+ + + ++ + + G +++A ++ M
Sbjct: 133 VSILSACSSPAVLNWGREIHVRVMEA-GLANDTTVGNALISMYAKCGSVRDARRVFDAM 190
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 181/649 (27%), Positives = 336/649 (51%), Gaps = 38/649 (5%)
Query: 8 SFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQASV 65
S+N+II+ S G D L + M++ P TF L+ +C SL+ G V
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
+ +G + +D+++ T+L+ Y + G VF+ M +++V W +++ + + G +
Sbjct: 75 IVDG-YSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVA 133
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
++ + R + + + +G++ G+ +L + +H VI+ GF ++ +ANS++N+
Sbjct: 134 FSMYNIMRRQGIQPSSVTMLGLLSGV---LELVHLQCLHACVIQYGFGSDVALANSMLNV 190
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C + A+ +F+ ++ RDV+SWN+++ A+ N + L+L +RM D + P+Q TF
Sbjct: 191 YCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTF 250
Query: 246 VYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
++ S A +Q+ + +GK +H +++ LE D + ++L+ Y KC N+ A F +
Sbjct: 251 GSLV-SAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMM 309
Query: 305 NKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCL 363
+K+++SW A+I G + ++ + +L+ P+ T + VL +
Sbjct: 310 HKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAE--------- 360
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
LGS + G I L L+IP N + +Y + G +
Sbjct: 361 ------------LGSFPLGTSVHGYI---LRQRIKLDIPS----QNSLVTMYAKCGHLEQ 401
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
+ + ++ R DIVSWN +++ A NG + L LF MR AR PD+ T VSLL AC+
Sbjct: 402 SCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACAS 461
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
+ L G +H + K+ + + L+DMY KCG +GS+ K F+ M +++++W++
Sbjct: 462 IGALHQGKWIHNFVTKS-CLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSS 520
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSY 603
+I+ G +G + AL + + G +P+ V +++L+AC H GLV +G+ F M + +
Sbjct: 521 IIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDF 580
Query: 604 GVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G+EP ++H C+VDLL R G ++EA M P+ + L+ C+
Sbjct: 581 GIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACR 629
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 240/483 (49%), Gaps = 31/483 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M DRNVV + ++I Y+R G + A M+ M +G +P+ T GLLS L V
Sbjct: 109 MDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLS-GVLELVHLQC 167
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L A V++ G F +D + ++L +Y + G +++ ++FE M + +++WNS+VS + + G
Sbjct: 168 LHACVIQYG-FGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLG 226
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + + L + + + +F ++ + + L G+ +HG +++ G + + +
Sbjct: 227 NIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIET 286
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL+ MY +C + SA ++F+ + +DV+SW +I L +++ A+ ++ RM V P
Sbjct: 287 SLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMP 346
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T V+ +CA L + LG S+H +++ ++ D+ ++LV YAKC +LE + F
Sbjct: 347 STATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVF 406
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
+S ++IVSWNA++ G+A LL E+ + RP+ T +L++ + L
Sbjct: 407 DRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALH 466
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
G + ++ + + TAL +Y++ G
Sbjct: 467 ----------------QGKWIHNFVTKSCLGPCILIDTAL------------VDMYSKCG 498
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
K ++ + D+VSW+ +IA +G + L ++ I P++ ++S+LS
Sbjct: 499 DLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILS 558
Query: 480 ACS 482
ACS
Sbjct: 559 ACS 561
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 236/471 (50%), Gaps = 19/471 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
M R+V+S+NS++S Y++ G + + L++ + M G EP Q TFG L+S ++ G
Sbjct: 207 MDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVG 266
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +L+ GL D+ + T+L+G+Y + G ++ +FE M K +++W +++S +
Sbjct: 267 KMVHGHILRAGLE-QDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQ 325
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + + +F +++S V + ++ V+ + G +HG +++ ++
Sbjct: 326 NDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPS 385
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSLV MY +C + + +F + RD+VSWN I+ A++ + KAL L+ M
Sbjct: 386 QNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQ 445
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T V ++ +CA + GK IH V K+ L + + +ALVD Y+KC +L A
Sbjct: 446 RPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQK 505
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL----RSSL 353
CF + +++VSW+++I GY S T++ + + L G +PN + +L + L
Sbjct: 506 CFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGL 565
Query: 354 AFQLLQL-HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
Q L H + G E ++ +++G + +A +F + P+ P+ +
Sbjct: 566 VDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRM-FPK---PSMDVL 621
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
GI + + +E DIV+ IVI A+ G+Y ++ + M+
Sbjct: 622 GILL------DACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMK 666
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 6/217 (2%)
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
P S+N +I + G + +VL + M + PD +TF SL+ AC+ L + G S
Sbjct: 11 PATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSF 70
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H + + SSD+++ LI+ Y K G S+ K+F+ M DRNV+ WT +I G
Sbjct: 71 HQRV-IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGE 129
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
A + M G +P V ++ +L+ G L ++ YG ++ +
Sbjct: 130 HDVAFSMYNIMRRQGIQPSSVTMLGLLS----GVLELVHLQCLHACVIQYGFGSDVALAN 185
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++++ + G +++A+ + M + + W + + G
Sbjct: 186 SMLNVYCKCGRVEDAQALFELMD-ARDVISWNSLVSG 221
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 194/646 (30%), Positives = 331/646 (51%), Gaps = 46/646 (7%)
Query: 20 GYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQASVLKNGLFCADAFVG 78
G + A+ +M+++G P T+ L C + L L D+
Sbjct: 45 GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104
Query: 79 TALLGLYGRHGCLDEVVSVFEDM-PRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEV 137
+L+ LY + G ++ S+F+ M + L++W+++VS F + + F +++ +
Sbjct: 105 NSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164
Query: 138 ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELLVANSLVNMYFQCAG-IWSA 195
E F S + + G+ I G V+K G+ ++ V L++M+ + G + SA
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
K+F+ + R+ V+W +I L + G+A++L+L M + P++ T VI++CA +
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANM 284
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD---NLEGAHLCFSEISNKNIVSWN 312
+ +LG+ +H++ I++ L D VG L++ YAKC ++ A F +I + N+ SW
Sbjct: 285 ELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT 344
Query: 313 ALILGYASKS--SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIR 366
A+I GY K ++ L ++ PN FTFS L++ L Q+ ++
Sbjct: 345 AMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVK 404
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
+G+ + V SL++ YA R+G+ ++ K
Sbjct: 405 LGFSSVNCVANSLISMYA--------------------------------RSGRIDDARK 432
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
L +++S+N VI A A N + +E LELF + + +TF SLLS + +
Sbjct: 433 AFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGT 492
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
+ G +H + K+ + + + VCN LI MY +CG+I S+ ++F +M DRNVI+WT++I+
Sbjct: 493 IGKGEQIHARVIKSGLKLNQS-VCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIIT 551
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
+GFA +ALE F +M G +P+ V IAVL+AC H GLV EG + F+ M +GV
Sbjct: 552 GFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVI 611
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
P M+HY C+VD+L R G L EA + I +MP+ +AL+WRTFL C+
Sbjct: 612 PRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACR 657
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 146/599 (24%), Positives = 267/599 (44%), Gaps = 93/599 (15%)
Query: 7 VSFNSIISAYSRCGYVED--------------------------------ALRMFLYMIN 34
V+ NS+IS YS+CG E AL F+ MI
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 35 RGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLY--GRHGC 90
G+ P ++ F +C + V G + V+K G +D VG L+ ++ GR G
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGR-GD 220
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG 150
L VFE MP ++ VTW +++ + G+ + + LF E++ S + GVI
Sbjct: 221 LVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISA 280
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA---GIWSAEKMFKDVEIRDV 207
+N + L G+Q+H I++G + V L+NMY +C+ + +A K+F + +V
Sbjct: 281 CANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV 340
Query: 208 VSWNTIIGALAESENFG-KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
SW +I + + +AL+L+ M + V PN TF + +CA L +G+ +
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPT 325
+K V ++L+ YA+ ++ A F + KN++S+N +I YA +S
Sbjct: 401 HAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEE 460
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMT 381
++ L E+ G + FTF+ +L + + + Q+H +I+ G + + V +L++
Sbjct: 461 ALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALIS 520
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
Y++ G I A ++ +E +++SW
Sbjct: 521 MYSRCGNIESAF--------------------------------QVFEDMEDRNVISWTS 548
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG-------SSLH 494
+I A +G + LELF M + P+ T++++LSACS + + G + H
Sbjct: 549 IITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEH 608
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNG 552
G+I + E + C ++D+ G+ GS+ +++ N M + + + W + A ++G
Sbjct: 609 GVIPRME-----HYAC--MVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHG 660
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 246/469 (52%), Gaps = 40/469 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+RN V++ +I+ + GY +A+ +FL MI G+EP +FT G++S C ++ + G
Sbjct: 231 MPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLG 290
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGR---HGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
QL + +++GL D VG L+ +Y + G + +F+ + ++ +W ++++
Sbjct: 291 QQLHSQAIRHGL-TLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITG 349
Query: 116 F-GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ K G+ E+ + LF ++ + V +F + +N L GEQ+ +K GF
Sbjct: 350 YVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSS 409
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
VANSL++MY + I A K F + ++++S+NT+I A A++ N +ALEL+ +
Sbjct: 410 VNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIE 469
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ + TF +++ A + G+ IHA+VIK+ L+ + V +AL+ Y++C N+E
Sbjct: 470 DQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIE 529
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F ++ ++N++SW ++I G+A T ++ L ++L+ G RPN T+ VL +
Sbjct: 530 SAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSAC- 588
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
H ++ G+++++ + Y + G+ IPR A ++
Sbjct: 589 ------SHVGLVNEGWKHFK-------SMYTEHGV------------IPRMEHYACMV-D 622
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKY 461
I R+G +E ++ ++ + + D + W + AC +G+ LEL K+
Sbjct: 623 ILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGN----LELGKH 667
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 4/199 (2%)
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
+NG + + ++M +PD T+ L C + + +G+ +H + +++ + D+
Sbjct: 43 NNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSD-LQLDS 101
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISALGLNGFAQRALEKFREMEF 566
N LI +Y KCG + IF M + R++I+W+A++S N RAL F +M
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR-YGHL 625
G+ P+ A AC V G +F + ++ ++ ++ ++D+ V+ G L
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 626 KEAEKIITTMPFPPNALIW 644
A K+ MP NA+ W
Sbjct: 222 VSAFKVFEKMP-ERNAVTW 239
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 190/653 (29%), Positives = 321/653 (49%), Gaps = 39/653 (5%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQ 60
++NVV +NS+ISAY++ +A +MF M+ +P TF ++ C +S N G
Sbjct: 319 EKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKS 378
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L A V+K L + V TALL +Y + G L+ +F MPR++L++WNS++S +G +G
Sbjct: 379 LHAHVMKYRL-DSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNG 437
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
E M FC++ S V ++ S + + G+ H + FD L ++N
Sbjct: 438 LWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISN 497
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L+ Y C + S+ K+F+ + +R+ +SWNT+I + + KA+ L +M + +
Sbjct: 498 ALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMEL 557
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T + +I C +N I G ++H IK CDV + +AL+ Y C ++ F
Sbjct: 558 DLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLF 617
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFL-LIELLQLGYRPNEFTFSHVLRSSLAF-QLL 358
+ ++IVSWNALI GY + ++++ G +PN T ++L S Q
Sbjct: 618 EVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCRTLLQGK 677
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
+H +R G ++ SL++ YA R
Sbjct: 678 SIHAFAVRTGVIVETPIITSLISMYA--------------------------------RF 705
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
N + L + DI WN +++ + KE + F + AR+ PD TF+SL+
Sbjct: 706 ENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLI 765
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
SAC +L +L L +S+ + + + N LID++ +CG+I + KIF ++ ++
Sbjct: 766 SACVQLSSLNLSNSVMAYVIQKGF-DKHIVISNALIDLFARCGNISIAKKIFEGLSSKDA 824
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
++W+ +I+ GL+G ++ AL +M G KPD + +VL+AC HGG + +G +F
Sbjct: 825 VSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNS 884
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
M GV M+HY C+VDLL R G L EA + +P P+ + + L C
Sbjct: 885 MVEE-GVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGAC 936
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 157/584 (26%), Positives = 283/584 (48%), Gaps = 39/584 (6%)
Query: 20 GYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQASVLKNGLFCADAFVG 78
G ED L ++L G FTF ++ +C +L V A+ ++ F + +
Sbjct: 134 GLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQ 193
Query: 79 TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVA 138
TAL+ Y + G + + V + + + LVTWN+++S + +GF ++ + ++ +
Sbjct: 194 TALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLK 253
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
S+F +I + + L+ G+ IHG V+K+GF + + +L++MY ++ A +
Sbjct: 254 PNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDL 313
Query: 199 FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
F ++VV WN++I A A+++ +A +++ +M + PN TFV +I C N
Sbjct: 314 FDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANF 373
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
GKS+HA V+K L+ + V +AL+ YAK +L A F ++ +N++SWN++I GY
Sbjct: 374 WYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGY 433
Query: 319 ASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLG 377
S+ ++ G+ P+ + ++L + + I +G + +
Sbjct: 434 GHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLE-------AILLGKAAHAF--- 483
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
S+ K F + LNI +N + Y+ G+ + + KL ++ + +
Sbjct: 484 ----SFRKE--------FDSNLNI------SNALLAFYSDCGKLSSSFKLFQKMPLRNAI 525
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SWN +I+ C HNGD K+ + L M+ ++ D T +S++ C NL G +LHG
Sbjct: 526 SWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYA 585
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
KT + D + N LI MY CG I + +F M R++++W ALI+ +
Sbjct: 586 IKTG-FACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEV 644
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACR--------HGGLVREGM 593
+ F +M G KP+ V L+ +L +CR H VR G+
Sbjct: 645 MASFCQMIREGQKPNYVTLLNLLPSCRTLLQGKSIHAFAVRTGV 688
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 140/565 (24%), Positives = 258/565 (45%), Gaps = 36/565 (6%)
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED--CMFLFCELVRSEVALTESSFVG 146
G + +S FE + + S+ N ++ HG ED C++L C ++ + +F
Sbjct: 103 GAPELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPS--DDFTFPF 160
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
VI + + E +H +V++ F+ L++ +LV+ Y + + A + + D
Sbjct: 161 VIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPD 220
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
+V+WN +I + + + E+ +++ + PN +TF +I C ++ +GKSIH
Sbjct: 221 LVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHG 280
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS 326
V+K+ D F+ AL+ YA NL A F + KN+V WN++I YA +
Sbjct: 281 FVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSE 340
Query: 327 IF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAK 385
F + ++L+ +PN TF II + + G + ++
Sbjct: 341 AFKMFQQMLKANMQPNVVTFVS----------------IIPCCENSANFWYGKSLHAHVM 384
Query: 386 SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA 445
+ L+ TAL +Y + G N + Q+ R +++SWN +I+
Sbjct: 385 KYRLDSQLSVATAL------------LSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISG 432
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
HNG ++ ++ F M+ PD + V++LSACSKL + LG + H + E S
Sbjct: 433 YGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKE-FDS 491
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
+ + N L+ Y CG + SS K+F +M RN I+W LIS NG ++A+ +M+
Sbjct: 492 NLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQ 551
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
+ D V LI+++ CR + +GM L ++ G ++ + ++ + G +
Sbjct: 552 QEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKT-GFACDVSLVNALISMYFNCGDI 610
Query: 626 KEAEKIITTMPFPPNALIWRTFLEG 650
+ + MP+ + + W + G
Sbjct: 611 NAGKFLFEVMPW-RSIVSWNALITG 634
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 143/580 (24%), Positives = 269/580 (46%), Gaps = 48/580 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP RN++S+NS+IS Y G E ++ F M GF+P + +LS C L +
Sbjct: 418 MPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLG 477
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + F ++ + ALL Y G L +F+ MP ++ ++WN+++S +
Sbjct: 478 KAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHN 537
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + + L ++ + ++ L + + +I ++L G +HG IK GF ++ +
Sbjct: 538 GDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLV 597
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L++MYF C I + + +F+ + R +VSWN +I + + + +M +
Sbjct: 598 NALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQK 657
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN T + ++ SC L + GKSIHA ++ + + + ++L+ YA+ +N+
Sbjct: 658 PNYVTLLNLLPSCRTL---LQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFL 714
Query: 300 FSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F ++I WNA++ Y +K++ S+ ELL P+ TF ++ + + L
Sbjct: 715 FEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSL 774
Query: 359 QLH----CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
L +I+ G++ + + +L+ +A+ G IS A L+ AV + +I G
Sbjct: 775 NLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMING- 833
Query: 415 YNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYM------RA 464
Y G + LLSQ+ +PD +++ V++AC+H G + +F M R
Sbjct: 834 YGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEEGVPRR 893
Query: 465 ARIYP-------------DNYTFV-------------SLLSACSKLCNLALGSSLHGLIK 498
Y + Y FV SLL AC N+ LG + L+
Sbjct: 894 MEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGACIIHGNVKLGEKISSLLF 953
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
+ + +S ++V ML ++Y G + ++ ++M +R +
Sbjct: 954 ELDPKNSGSYV--MLYNIYAAAGRWMDANRVRSDMEERQL 991
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 191/419 (45%), Gaps = 49/419 (11%)
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P T+F+ + + C ++N K + + +I L D +V + +F C +L L
Sbjct: 55 PKVTSFLRLFDLCRNIENL---KPLGSVLIVRDLMRDEYV---VAEFIISCFHLGAPELA 108
Query: 300 ---FSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF 355
F I ++ N +I + + ++ LG ++FTF V+++ A
Sbjct: 109 LSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTAL 168
Query: 356 QLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ + HC+++R +E + +L+ YAK+G +V A ++
Sbjct: 169 GAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTG----------------RMVKARLV 212
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
L ++ +PD+V+WN +I+ + NG KEV E+ + + + P+
Sbjct: 213 ----------------LDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNV 256
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF S++ C+++ L +G S+HG + K+ SSD F+ LI MY G++ + +F+
Sbjct: 257 STFASIIPLCTRMKCLDIGKSIHGFVVKSG-FSSDEFLTPALISMYAGGGNLFIARDLFD 315
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
++NV+ W ++ISA N + A + F++M +P+ V ++++ C +
Sbjct: 316 SAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWY 375
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G L + + Y ++ ++ ++ + + G L A+ I MP N L W + + G
Sbjct: 376 GKSLHAHVMK-YRLDSQLSVATALLSMYAKLGDLNSADFIFYQMP-RRNLLSWNSMISG 432
>gi|255570402|ref|XP_002526160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534537|gb|EEF36236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 762
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/615 (30%), Positives = 324/615 (52%), Gaps = 42/615 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPVE-G 58
MP+ NVV++N +IS +++ G+ ++ +F M G + T+ T G +LS SL ++ G
Sbjct: 145 MPNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIKSTRSTLGSVLSAIASLTDLDFG 204
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A +K GL ++ +VG++L+ +Y + L+ VF+ + +++V WN++V + +
Sbjct: 205 LLVHAEAIKQGLD-SNVYVGSSLINMYAKCKELEAAKKVFDPIDERNVVLWNAMVGGYAQ 263
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G+ + + L + E ++ ++ + + +E G Q+H ++IKN F L V
Sbjct: 264 NGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHVEGGRQLHSIIIKNKFASNLFV 323
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L++MY + + A K F+ ++ RD VSWN II + E+ +A ++ +M + +
Sbjct: 324 GNALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIVGYVQEEDEVEAFLMFQKMHLVGI 383
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ + ++++CA ++ GK IH +K+ LE ++ GS+L+D YAKC ++ A
Sbjct: 384 LPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLYAGSSLIDMYAKCGDVGSAQK 443
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
+ ++VS NALI GYA + +I L ++ G P+E TF+ +L + L
Sbjct: 444 ILKSMPEHSVVSINALIAGYAPVNLEEAIILFEKMQAEGLNPSEITFASLLDGCGGPEQL 503
Query: 359 ----QLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q+HCLI++ G + + LG SL+ Y KS +DA + + P++ +
Sbjct: 504 ILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDARILFSEFSNPKSTIL------ 557
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
W +I+ A N E L+ ++ MR+ PD T
Sbjct: 558 -------------------------WTAMISGLAQNNCSDEALQFYQEMRSCNALPDQAT 592
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FVS+L AC+ L ++ G +H LI +T + D C+ LIDMY KCG + SS+++F +M
Sbjct: 593 FVSVLRACAVLSSIGDGREIHSLIFRTG-LDLDESTCSALIDMYAKCGDVRSSMQVFEDM 651
Query: 534 TDRN-VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+N VI+W ++I NG+A+ AL F EM+ PD V + VLTAC H G V EG
Sbjct: 652 HSKNDVISWNSMIVGFAKNGYAENALRIFNEMKQAHVIPDDVTFLGVLTACSHAGRVSEG 711
Query: 593 MELFERMNRSYGVEP 607
++F+ M S+ P
Sbjct: 712 RQIFD-MKPSFVTAP 725
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 207/440 (47%), Gaps = 45/440 (10%)
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
++PN+ TF V++ CA L + G+ +H V+K E F AL+D YAK + +
Sbjct: 14 MWPNEFTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALIDMYAKNNRMSDCR 73
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLA-- 354
F + + VSW +LI GY P + E + ++G P++ F V+ + +A
Sbjct: 74 RVFDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVAFVTVINAYVALG 133
Query: 355 ---------FQL------------------------LQLHCLIIRMGYENYEYVLGSLMT 381
FQ+ ++L C + + G ++ LGS+++
Sbjct: 134 RLDDALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIKSTRSTLGSVLS 193
Query: 382 SYAKS-----GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
+ A GL+ A A L+ V + + +Y + + K+ ++ ++
Sbjct: 194 AIASLTDLDFGLLVHAEAIKQGLD--SNVYVGSSLINMYAKCKELEAAKKVFDPIDERNV 251
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
V WN ++ A NG EV+EL M++ +PD +T+ S+LSAC+ L ++ G LH +
Sbjct: 252 VLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHVEGGRQLHSI 311
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
I K + +S+ FV N LIDMY K G + + K F M R+ ++W A+I
Sbjct: 312 IIKNK-FASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIVGYVQEEDEVE 370
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
A F++M +G PD V+L ++L+AC + +G + ++ G+E + ++
Sbjct: 371 AFLMFQKMHLVGILPDEVSLASILSACANVEGFEQGKPI-HCLSVKSGLETSLYAGSSLI 429
Query: 617 DLLVRYGHLKEAEKIITTMP 636
D+ + G + A+KI+ +MP
Sbjct: 430 DMYAKCGDVGSAQKILKSMP 449
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 167/353 (47%), Gaps = 43/353 (12%)
Query: 337 GYRPNEFTFSHVLR-----SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
G PNEFTF+ VL S+ F L +HC ++++G+E + +G+L+ YAK+ +SD
Sbjct: 13 GMWPNEFTFAIVLSGCARLDSVEFGRL-VHCNVVKLGFEFSSFCVGALIDMYAKNNRMSD 71
Query: 392 ---------ALAFVTALNIPRAVVPANI-------------------------IAGIYNR 417
+L V+ ++ V A + + Y
Sbjct: 72 CRRVFDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVAFVTVINAYVA 131
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G+ ++ + L Q+ P++V+WN++I+ A G + +ELF MR A I T S+
Sbjct: 132 LGRLDDALGLFFQMPNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIKSTRSTLGSV 191
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
LSA + L +L G +H K + + S+ +V + LI+MY KC + ++ K+F+ + +RN
Sbjct: 192 LSAIASLTDLDFGLLVHAEAIK-QGLDSNVYVGSSLINMYAKCKELEAAKKVFDPIDERN 250
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
V+ W A++ NG+A +E M+ GF PD ++L+AC V G +L
Sbjct: 251 VVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHVEGGRQLHS 310
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ ++ + + ++D+ + G L++A K M N + W + G
Sbjct: 311 IIIKN-KFASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDN-VSWNAIIVG 361
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
VL+ + + + ++P+ +TF +LS C++L ++ G +H + K S +F LI
Sbjct: 2 VLKCYGLLWSHGMWPNEFTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFS-SFCVGALI 60
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
DMY K + ++F+ + ++WT+LI+ G + ALE F +M+ +G +PD+V
Sbjct: 61 DMYAKNNRMSDCRRVFDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQV 120
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
A + V+ A G + + + LF +M P + ++ ++ + GH ++ ++
Sbjct: 121 AFVTVINAYVALGRLDDALGLFFQMPN-----PNVVAWNVMISGHAQRGHETKSIELFCN 175
Query: 635 M 635
M
Sbjct: 176 M 176
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 181/565 (32%), Positives = 298/565 (52%), Gaps = 43/565 (7%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF++MP++++ +W ++ +HG D FCE++ S + + ++ +I
Sbjct: 177 VFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDS 236
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
LE G+ +H ++ GF + V+ SL+NMY + I + +F + + VSWN +I
Sbjct: 237 LELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISG 296
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ +A +L++RM PN T V V + L + +GK + + +E +
Sbjct: 297 CTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGN 356
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSE--ISNKNIVSWNALILGYA-SKSSPTSIFLLIEL 333
V VG+AL+D Y+KC +L A F I+ WNA+I GY+ S S ++ L +++
Sbjct: 357 VLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQM 416
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
Q G + +T+ V + A + LQ +H ++++ G + LM
Sbjct: 417 CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLD--------LM--------- 459
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
V ++N N IA Y++ G + K+ ++E DIVSW ++ A + +
Sbjct: 460 ------VVSVN--------NAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQS 505
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
+E L F MR P+ +TF S+L +C+ LC L G +HGL+ K + DT
Sbjct: 506 SLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGL---DTEK 562
Query: 510 C--NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
C + LIDMY KCGSI + K+F+++++ ++++WTA+IS +G + AL+ FR ME
Sbjct: 563 CIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELS 622
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G K + V L+ VL AC HGG+V EG+ F++M YGV PEM+HY C++DLL R G L +
Sbjct: 623 GIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDD 682
Query: 628 AEKIITTMPFPPNALIWRTFLEGCQ 652
A + I MP PN ++W+T L GC+
Sbjct: 683 AMEFIRKMPMEPNEMVWQTLLGGCR 707
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 160/629 (25%), Positives = 289/629 (45%), Gaps = 66/629 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP RNV S+ +I + G D + F M+N G P +F + ++ SC L+ +E G
Sbjct: 181 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 240
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A ++ G F FV T+LL +Y + G +++ VF M + V+WN+++S
Sbjct: 241 KMVHAQIVMRG-FATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTS 299
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + LF + + V V + D+ G+++ + G + +LV
Sbjct: 300 NGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLV 359
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS--WNTIIGALAESENFGKALELYLRMSVD 236
+L++MY +C + A +F I V+ WN +I ++S +ALELY++M +
Sbjct: 360 GTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQN 419
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF-VGSALVDFYAKCDNLEG 295
+ + T+ V N+ A ++ G+ +H V+K L+ V V +A+ D Y+KC LE
Sbjct: 420 GITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLED 479
Query: 296 AHLCFSEISNKNIVSWNALILGYASKS---SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
F + ++IVSW L+ Y+ S + F L+ + G+ PN+FTFS VL S
Sbjct: 480 VRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMR--EEGFAPNQFTFSSVLISC 537
Query: 353 LAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ L Q+H L+ + G + + + +L+ YAK G I++A
Sbjct: 538 ASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEA---------------- 581
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
K+ ++ PDIVSW +I+ A +G ++ L+LF+ M + I
Sbjct: 582 ----------------GKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIK 625
Query: 469 PDNYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
+ T + +L ACS + G +G++ + E + C +ID+ G+ G
Sbjct: 626 ANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEME-----HYAC--IIDLLGRVG 678
Query: 522 SIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
+ +++ +M + N + W L+ ++G + L + + L +P+ A +L
Sbjct: 679 RLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVE--LGEIAARKILSIRPEYSATYVLL 736
Query: 581 TACR-HGGLVREGMELFERMNRSYGVEPE 608
+ G +G+ L M + GV+ E
Sbjct: 737 SNTYIETGSYEDGLSLRNVM-KDQGVKKE 764
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/516 (25%), Positives = 238/516 (46%), Gaps = 43/516 (8%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELLVA-NSLVNMYFQCAGIWSAEKMFKD 201
+ V+ + + + + +HGLV+K+ F D +L+V N ++Y +C+ +A +F +
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 180
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILG 261
+ R+V SW +I E F + + M + P++ + +I SC GL + LG
Sbjct: 181 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 240
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
K +HA+++ +FV ++L++ YAK ++E ++ F+ ++ N VSWNA+I G S
Sbjct: 241 KMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSN 300
Query: 322 SSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL------QLHCLIIRMGYENYEY 374
F L + + PN +T V S +L+ ++ +G E
Sbjct: 301 GLHLEAFDLFVRMKNGACTPNMYTLVSV--SKAVGKLVDVNMGKEVQNCASELGIEGNVL 358
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
V +L+ Y+K G + DA R+V N I N
Sbjct: 359 VGTALIDMYSKCGSLHDA----------RSVFDTNFINCGVN------------------ 390
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
WN +I+ + +G +E LEL+ M I D YT+ S+ +A + +L G +H
Sbjct: 391 --TPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVH 448
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
G++ K + V N + D Y KCG + K+F+ M +R++++WT L++A +
Sbjct: 449 GMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLG 508
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHC 614
+ AL F M GF P++ +VL +C + G ++ + ++ G++ E
Sbjct: 509 EEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKA-GLDTEKCIESA 567
Query: 615 VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++D+ + G + EA K+ + P+ + W + G
Sbjct: 568 LIDMYAKCGSITEAGKVFDKIS-NPDIVSWTAIISG 602
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 116/251 (46%), Gaps = 8/251 (3%)
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N A +Y++ ++ + ++ + ++ SW ++I +G + + + F M + I
Sbjct: 159 NHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGIL 218
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD + + +++ +C L +L LG +H I ++ FV L++MY K GSI S
Sbjct: 219 PDKFAYSAIIQSCIGLDSLELGKMVHAQI-VMRGFATHIFVSTSLLNMYAKLGSIEDSYW 277
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+FN MT+ N ++W A+IS NG A + F M+ P+ L++V A
Sbjct: 278 VFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVD 337
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT------MPFPPNAL 642
V G E+ + G+E + ++D+ + G L +A + T + P NA+
Sbjct: 338 VNMGKEV-QNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAM 396
Query: 643 IWRTFLEGCQR 653
I GC +
Sbjct: 397 ISGYSQSGCSQ 407
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 7/181 (3%)
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC-NMLIDMYGKCGSIGSSVKIFNE 532
+ +L C++ ++ ++HGL+ K+ D V N +Y KC ++ +F+E
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 180
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
M RNV +WT +I +G + F EM G PD+ A A++ +C + +
Sbjct: 181 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSC----IGLDS 236
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK--IITTMPFPPNALIWRTFLEG 650
+EL + ++ + H LL Y L E + M N + W + G
Sbjct: 237 LELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISG 296
Query: 651 C 651
C
Sbjct: 297 C 297
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 200/657 (30%), Positives = 337/657 (51%), Gaps = 52/657 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLL-SCDSLNPVE-GAQ 60
+N+ +N++IS+YSR + L MF+ MI++ P FTF ++ +C ++ V G
Sbjct: 149 KNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLA 208
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ V+K GL D FVG AL+ YG HG + + + +F+ MP ++LV+WNS++ +F +G
Sbjct: 209 VHGLVVKTGL-VEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+D F+ +VA + V V+ + E+++ G+ +HG +K D EL+V N
Sbjct: 268 --DDGAFM------PDVA----TVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNN 315
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM--SVDIV 238
+L++MY + I ++ +FK ++VVSWNT++G + + +L +M + V
Sbjct: 316 ALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDV 375
Query: 239 FPNQTTFVYVINSCAGLQNSILG--KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
++ T + + C S+L K +H +K D + +A V YAKC +L A
Sbjct: 376 KADEVTILNAVPVC--FDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYA 433
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F I +K + SWNALI GYA S P S+ +++ G P+ FT +L +
Sbjct: 434 QRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKL 493
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+ L R+G E + +++ ++ L D +++ L++ Y
Sbjct: 494 KSL-------RLGKEVHGFII--------RNWLERDLFVYLSVLSL-------------Y 525
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
G+ L +E +VSWN VI NG + L LF+ M I P + +
Sbjct: 526 IHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMM 585
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
++ ACS L +L LG H K ++ + F+ +IDMY K G+I S K+FN + +
Sbjct: 586 TVFGACSLLPSLRLGREAHAYALK-HLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKE 644
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
++ +W A+I G++G A+ A++ F EM+ G PD + + VLTAC H GL+ EG+
Sbjct: 645 KSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRY 704
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++M S+G++P + HY CV+D+L R G L A ++ M P+ IW + L C+
Sbjct: 705 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCR 761
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 225/511 (44%), Gaps = 52/511 (10%)
Query: 147 VIHGLSNEQDLEFGEQIHGLVI-KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR 205
++ +D+E G +IH LV + ++ ++ MY C + F + +
Sbjct: 90 LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149
Query: 206 DVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
++ WN +I + + +E + + LE++++M S + P+ TF VI +CAG+ + +G ++
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
H V+K L D+FVG+ALV FY + A F + +N+VSWN++I ++
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDD 269
Query: 325 TS----IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM 380
+ + ++ +L + R E +H +++ + V +LM
Sbjct: 270 GAFMPDVATVVTVLPVCAREREIGVGK-----------GVHGWAVKLSLDKELVVNNALM 318
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
Y+K G I D+ + LN + VV N + G ++ G + T LL Q+
Sbjct: 319 DMYSKWGCIIDS-QMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQM--------- 368
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
A + D K D T ++ + C L LH K
Sbjct: 369 -----LAGSEDVK---------------ADEVTILNAVPVCFDESVLPSLKELHCYSLKQ 408
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
E + D + N + Y KCGS+ + ++F+ + + + +W ALI + + +L+
Sbjct: 409 EFV-YDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDA 467
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
+M+ G PD + ++L+AC +R G E+ + R++ +E ++ Y V+ L +
Sbjct: 468 HLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSLYI 526
Query: 621 RYGHLKEAEKIITTMPFPPNALI-WRTFLEG 650
G L + + M N+L+ W T + G
Sbjct: 527 HCGELCTVQVLFDAM--EDNSLVSWNTVITG 555
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 129/591 (21%), Positives = 261/591 (44%), Gaps = 85/591 (14%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC------DSLNPV 56
++NVVS+N+++ +S G + + M+ G E + +L+ +S+ P
Sbjct: 339 NKNVVSWNTMVGGFSAEGDIHGTFDLLRQML-AGSEDVKADEVTILNAVPVCFDESVLP- 396
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+L LK F D + A + Y + G L VF + K+L +WN+++ +
Sbjct: 397 SLKELHCYSLKQE-FVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGY 455
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ + ++ S + + ++ S + L G+++HG +I+N + +L
Sbjct: 456 AQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 515
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V S++++Y C + + + +F +E +VSWNT+I ++ +AL L+ +M +
Sbjct: 516 FVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLY 575
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ P + + V +C+ L + LG+ HA +K+ LE + F+ +++D YAK + +
Sbjct: 576 GIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQS 635
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F+ + K+ SWNA+I+GY + +I L E+ + G P++ TF VL
Sbjct: 636 SKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVL------ 689
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NII 411
T+ SGL+ + L ++ + + P +
Sbjct: 690 -------------------------TACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACV 724
Query: 412 AGIYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY-- 468
+ R GQ + +++ +++ E PD+ WN +++ C + LE+ + + AA+++
Sbjct: 725 IDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCR----IHQNLEMGEKV-AAKLFVL 779
Query: 469 ----PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
P+NY +S L A GL K ++ + M + C I
Sbjct: 780 EPEKPENYVLLSNLYA--------------GLGKWDDVRQVRQRMKEMSLRKDAGCSWIE 825
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQ-RALEKFREMEF--LGFKPD 572
+ K+F + ++ L+GF + ++L EM+ +G++PD
Sbjct: 826 LNGKVF-----------SFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPD 865
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 171/374 (45%), Gaps = 26/374 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--G 58
M D ++VS+N++I+ + + G+ E AL +F M+ G +P + + SL P G
Sbjct: 541 MEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLG 600
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A LK+ L +AF+ +++ +Y ++G + + VF + KS +WN+++ +G
Sbjct: 601 REAHAYALKH-LLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGM 659
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG-EQIHGLVIKNGFDYELL 177
HG ++ + LF E+ R+ + +F+GV+ ++ L G + + G L
Sbjct: 660 HGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLK 719
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+++M + + +A ++ ++ E DV WN+++ +N ++ ++ V
Sbjct: 720 HYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFV- 778
Query: 237 IVFPNQT-TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ P + +V + N AGL + + ++ + +L D A C +E
Sbjct: 779 -LEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKD-----------AGCSWIEL 826
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
FS + + + G+ S SI L +++ ++GYRP+ + H L
Sbjct: 827 NGKVFSFVVGERFLD------GFEEIKSLWSI-LEMKIWKMGYRPDTSSVQHDLSEEEKI 879
Query: 356 QLLQLHCLIIRMGY 369
+ L+ H + + Y
Sbjct: 880 EQLRGHSEKLAITY 893
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 196/661 (29%), Positives = 339/661 (51%), Gaps = 45/661 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP + + ++N++I AY G +L ++ M G TF +L +C L G
Sbjct: 140 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYG 199
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIVSIFG 117
A++ +K G + + FV +++G+Y + L+ +F+ MP K +V+WNS++S +
Sbjct: 200 AEVHGLAIKEG-YVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYS 258
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G + + LF E+ ++ +A +FV + + ++ G IH V+K+ + +
Sbjct: 259 SNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVF 318
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VAN+L+ MY + + A +F +++ D +SWN+++ ++ + +AL+ Y M
Sbjct: 319 VANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAG 378
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P+ + +I + A N++ G IHA +KN L+ D+ VG++LVD YAK +++
Sbjct: 379 QKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMD 438
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F ++ +K++VSW +I G+A S + L +QL G + S +L + +
Sbjct: 439 CIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLK 498
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L+ ++H IIR G +SD +V N I
Sbjct: 499 LISSVKEIHSYIIRKG--------------------LSD-------------LVLQNGIV 525
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y G + ++ +E D+VSW +I+ HNG E LELF M+ + PD+
Sbjct: 526 DVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSI 585
Query: 473 TFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ VS+LSA + L L G +HG LI+K ++ + + L+DMY +CG++ S +FN
Sbjct: 586 SLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGS--LASTLVDMYARCGTLEKSRNVFN 643
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ +++++ WT++I+A G++G + A++ FR ME PD +A +AVL AC H GL+ E
Sbjct: 644 FIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNE 703
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G E M Y +EP +HY C+VDLL R HL+EA + + M P A +W L C
Sbjct: 704 GRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGAC 763
Query: 652 Q 652
Q
Sbjct: 764 Q 764
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 169/635 (26%), Positives = 308/635 (48%), Gaps = 53/635 (8%)
Query: 39 PTQFTFGGLLS-----CDSLNPV-EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLD 92
P+QF+ S C S + EG Q+ A ++ + F+ T L+ +YG+ GCL
Sbjct: 72 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 131
Query: 93 EVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS 152
+ +F+ MP K++ TWN+++ + +G + L+ E+ S + L +F ++
Sbjct: 132 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 191
Query: 153 NEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWN 211
+D +G ++HGL IK G+ + VANS+V MY +C + A ++F + E DVVSWN
Sbjct: 192 LLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN 251
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
++I A + + +AL L+ M + PN TFV + +C G IHA V+K+
Sbjct: 252 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 311
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLL 330
+ +VFV +AL+ YA+ + A F + + + +SWN+++ G+ ++
Sbjct: 312 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 371
Query: 331 IELLQLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
E+ G +P+ ++ RS +Q+H ++ G ++ V SL+ YAK
Sbjct: 372 HEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAK- 430
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
F + +Y + + ++ D+VSW +IA
Sbjct: 431 --------FCSM---------------------KYMDCI--FDKMPDKDVVSWTTIIAGH 459
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
A NG + LELF+ ++ I D S+L ACS L ++ +H I + + SD
Sbjct: 460 AQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL--SD 517
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
+ N ++D+YG+CG++ + ++F + ++V++WT++IS NG A ALE F M+
Sbjct: 518 LVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKE 577
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
G +PD ++L+++L+A +++G E+ + R G E +VD+ R G L+
Sbjct: 578 TGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRK-GFVLEGSLASTLVDMYARCGTLE 636
Query: 627 EAEKIITTMPFPPNALIWRTF-----LEGCQRCRI 656
++ + + + ++W + + GC R I
Sbjct: 637 KSRNVFNFIR-NKDLVLWTSMINAYGMHGCGRAAI 670
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 151/579 (26%), Positives = 275/579 (47%), Gaps = 50/579 (8%)
Query: 1 MPDR-NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSC-DSLNPVE 57
MP++ +VVS+NS+ISAYS G +ALR+F M P +TF L +C DS +
Sbjct: 241 MPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQ 300
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + A+VLK+ + + FV AL+ +Y R G + E ++F +M ++WNS++S F
Sbjct: 301 GMFIHATVLKSSYYI-NVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFV 359
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G + + + E+ + + + +I + + G QIH +KNG D +L
Sbjct: 360 QNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQ 419
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V NSLV+MY + + + +F + +DVVSW TII A++ + +ALEL+ + ++
Sbjct: 420 VGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEG 479
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ + ++ +C+GL+ K IH+ +I+ L D+ + + +VD Y +C N++ A
Sbjct: 480 IDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAA 538
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQ 356
F I K++VSW ++I Y L L+ + G P+ + +L ++ +
Sbjct: 539 RMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLS 598
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L ++H +IR G+ + GSL A+ +
Sbjct: 599 ALKKGKEIHGFLIRKGF----VLEGSL----------------------------ASTLV 626
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y R G ++ + + + D+V W +I A +G + ++LF+ M I PD+
Sbjct: 627 DMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHI 686
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIIS--SDTFVCNMLIDMYGKCGSIGSSVKIF 530
FV++L ACS + G +K + + + C L+D+ G+ + + +
Sbjct: 687 AFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYAC--LVDLLGRANHLEEAYQFV 744
Query: 531 NEM-TDRNVITWTALISALGLNG---FAQRALEKFREME 565
M + W AL+ A ++ + A +K EM+
Sbjct: 745 KGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMD 783
>gi|302810303|ref|XP_002986843.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
gi|300145497|gb|EFJ12173.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
Length = 845
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 190/659 (28%), Positives = 323/659 (49%), Gaps = 51/659 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP R+V+S+ +++AY+R G++ +A +L M+ G P TF +L+ + + A
Sbjct: 187 MPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLA--ACSSARDAD 244
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L + + D V A + ++ + GCLD VF M R + +WN++V+ +HG
Sbjct: 245 LVYGNVVEAEWETDTMVANASINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHG 304
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F + + LF + SEVA+ +++ V + + + LE G+ IH V + G + +++
Sbjct: 305 FSSEALELFRRMP-SEVAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGT 363
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF-GKALELYLRMSVDIVF 239
+LV MY +C + A ++F + ++VVSWN +I A E+ +ALE++ M +D V
Sbjct: 364 ALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVR 423
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P +TT +N + ++ +GK +H ++ L D F+GSALV+ Y + +L A
Sbjct: 424 PTRTT---ALNVVSAVECQSVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRV 480
Query: 300 FSEISNKNIVSWNALI---LGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F +I +++ +WNA++ +G+ F +L G N TF L + +
Sbjct: 481 FEKIIERDVFAWNAIVGVCVGHGQPREALEWF--SRMLLEGASGNRATFLLALSAVSPDR 538
Query: 357 L---LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ +LH LI G E V +L++ YA+ + DA
Sbjct: 539 VSYGRKLHGLIAESGLEADNNVANALISMYARCKSLEDAR-------------------- 578
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+LE IVSW VIAAC G +E ++LF+ M + PD T
Sbjct: 579 ------------NTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRME---LEPDRVT 623
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F ++L AC+ + G +H ++ + S+ FV LI M+ K G++G + +IF +
Sbjct: 624 FTTVLEACTIVSAHREGKLVHSRARELGL-ESNVFVATALIHMHSKFGNLGEARRIFEAV 682
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+ W A++ G +Q ++ F M+ G PD + +AV++AC H GLV +G
Sbjct: 683 EAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSACSHAGLVEKGA 742
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M YGV ++ Y C++DLL R G L+EA + MP P+ + W+T L C+
Sbjct: 743 RTFASMGPDYGVGHGLEDYGCLIDLLARAGQLEEAYDFLQGMPCGPSDVTWKTLLAACK 801
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 186/655 (28%), Positives = 327/655 (49%), Gaps = 52/655 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M DR++V + S+++A+ V+ A F M G P + TF +L +C+SL +G
Sbjct: 89 MLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRVTFISILNACESL--AQGE 146
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ ++ L +D +G AL+ + + LD F+ MPR+ +++W +V+ + ++
Sbjct: 147 LVHRLIVDKNLE-SDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARN 205
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + + + ++ V +F+ V+ S+ +D + ++G V++ ++ + +VA
Sbjct: 206 GHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDADL---VYGNVVEAEWETDTMVA 262
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+ +NM+ +C + A +F ++ DV SWN ++ ALA+ +ALEL+ RM ++
Sbjct: 263 NASINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSEVAV 322
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
++TT V +++CA ++ GKSIH++V + LE DV G+ALV Y++C +L A
Sbjct: 323 -DKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRV 381
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL--GYRPNEFTFSHVLRSSLAFQL 357
F I KN+VSWN +I Y S S L I L L G RP T +V+ S++ Q
Sbjct: 382 FDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTTALNVV-SAVECQS 440
Query: 358 L--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+ QLH I+ G + ++ +L+ Y ++G + DA
Sbjct: 441 VGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDAR---------------------- 478
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
++ ++ D+ +WN ++ C +G +E LE F M + TF+
Sbjct: 479 ----------RVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFL 528
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
LSA S ++ G LHGLI ++ + +D V N LI MY +C S+ + F+ + D
Sbjct: 529 LALSAVSP-DRVSYGRKLHGLIAESG-LEADNNVANALISMYARCKSLEDARNTFDRLED 586
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+++++WT++I+A G Q A++ F+ ME +PDRV VL AC REG +L
Sbjct: 587 KSIVSWTSVIAACVDLGSCQEAIDLFQRME---LEPDRVTFTTVLEACTIVSAHREG-KL 642
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
R G+E + ++ + ++G+L EA +I + P A W L G
Sbjct: 643 VHSRARELGLESNVFVATALIHMHSKFGNLGEARRIFEAVEAPTLA-CWNAMLGG 696
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/560 (24%), Positives = 265/560 (47%), Gaps = 40/560 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLLSCDSLNPVE-G 58
M +V S+N++++A ++ G+ +AL +F M + + T L +C + +E G
Sbjct: 285 MKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSEVAVDKTTLVIA-LSTCAAPESLEDG 343
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + V + GL D GTAL+ +Y R G L E VF+ + K++V+WN++++ +G+
Sbjct: 344 KSIHSRVARLGLE-TDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGR 402
Query: 119 -HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ +F ++ V T ++ + V+ + + G+Q+HG ++ G +
Sbjct: 403 DESLHSRALEIFRLMLLDGVRPTRTTALNVVSAVECQS---VGKQLHGWIVDTGLYSDSF 459
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ ++LVNMY + + A ++F+ + RDV +WN I+G +ALE + RM ++
Sbjct: 460 IGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEG 519
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
N+ TF+ +++ + + S G+ +H + ++ LE D V +AL+ YA+C +LE A
Sbjct: 520 ASGNRATFLLALSAVSPDRVS-YGRKLHGLIAESGLEADNNVANALISMYARCKSLEDAR 578
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + +K+IVSW ++I S L + ++L P+ TF+ VL +
Sbjct: 579 NTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRMEL--EPDRVTFTTVLEA------ 630
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
C I+ E G L+ S A+ L + V A + ++++
Sbjct: 631 ----CTIVSAHRE------GKLVHSRARE------------LGLESNVFVATALIHMHSK 668
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G E ++ +E P + WN ++ A G + V++ F M+ + PD+ TF+++
Sbjct: 669 FGNLGEARRIFEAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAV 728
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DR 536
+SACS + G+ + + LID+ + G + + M
Sbjct: 729 VSACSHAGLVEKGARTFASMGPDYGVGHGLEDYGCLIDLLARAGQLEEAYDFLQGMPCGP 788
Query: 537 NVITWTALISALGLNGFAQR 556
+ +TW L++A + G +R
Sbjct: 789 SDVTWKTLLAACKIQGDVRR 808
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 245/521 (47%), Gaps = 62/521 (11%)
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
V+ S F+ +++ + + L ++ + G + S+V M+ +C I A
Sbjct: 24 VSDDHSKFLKLVNLCAERKLLHEATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDAS 83
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
++F+ + R +V W +++ A + E+ +A + RM ++ V P++ TF+ ++N+C L
Sbjct: 84 RVFEQMLDRSMVLWTSMVTAFVDDEDVDRAWLFFFRMQLEGVLPDRVTFISILNACESLA 143
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
G+ +H ++ LE DV +G+AL+ AKC +L+GA F + ++++SW ++
Sbjct: 144 Q---GELVHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVT 200
Query: 317 GYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV 375
YA F + +L G PN TF VL + C R + + V
Sbjct: 201 AYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAA----------CSSAR----DADLV 246
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
G+++ + ++ + AN ++++ G + + +++R D
Sbjct: 247 YGNVVEAEWETD-----------------TMVANASINMFSKCGCLDRAHDVFHRMKRWD 289
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
+ SWN ++AA A +G E LELF+ M + + D T V LS C+ +L G S+H
Sbjct: 290 VKSWNAMVAALAQHGFSSEALELFRRM-PSEVAVDKTTLVIALSTCAAPESLEDGKSIHS 348
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN-GFA 554
+ + + +D L+ MY +CG +G + ++F+ + +NV++W +I+A G +
Sbjct: 349 RVARLG-LETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLH 407
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTA--CR------HGGLVREGMELFERMNRSYGVE 606
RALE FR M G +P R + V++A C+ HG +V G+ + +
Sbjct: 408 SRALEIFRLMLLDGVRPTRTTALNVVSAVECQSVGKQLHGWIVDTGLYSDSFIGSA---- 463
Query: 607 PEMDHYHCVVDLLVRYGHLKEA----EKIITTMPFPPNALI 643
+V++ R G L +A EKII F NA++
Sbjct: 464 --------LVNMYERTGSLGDARRVFEKIIERDVFAWNAIV 496
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/565 (32%), Positives = 298/565 (52%), Gaps = 43/565 (7%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF++MP++++ +W ++ +HG D FCE++ S + + ++ +I
Sbjct: 123 VFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDS 182
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
LE G+ +H ++ GF + V+ SL+NMY + I + +F + + VSWN +I
Sbjct: 183 LELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISG 242
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ +A +L++RM PN T V V + L + +GK + + +E +
Sbjct: 243 CTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGN 302
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSE--ISNKNIVSWNALILGYA-SKSSPTSIFLLIEL 333
V VG+AL+D Y+KC +L A F I+ WNA+I GY+ S S ++ L +++
Sbjct: 303 VLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQM 362
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
Q G + +T+ V + A + LQ +H ++++ G + LM
Sbjct: 363 CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLD--------LM--------- 405
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
V ++N N IA Y++ G + K+ ++E DIVSW ++ A + +
Sbjct: 406 ------VVSVN--------NAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQS 451
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
+E L F MR P+ +TF S+L +C+ LC L G +HGL+ K + DT
Sbjct: 452 SLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGL---DTEK 508
Query: 510 C--NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
C + LIDMY KCGSI + K+F+++++ ++++WTA+IS +G + AL+ FR ME
Sbjct: 509 CIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELS 568
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G K + V L+ VL AC HGG+V EG+ F++M YGV PEM+HY C++DLL R G L +
Sbjct: 569 GIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDD 628
Query: 628 AEKIITTMPFPPNALIWRTFLEGCQ 652
A + I MP PN ++W+T L GC+
Sbjct: 629 AMEFIRKMPMEPNEMVWQTLLGGCR 653
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 160/629 (25%), Positives = 289/629 (45%), Gaps = 66/629 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP RNV S+ +I + G D + F M+N G P +F + ++ SC L+ +E G
Sbjct: 127 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 186
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A ++ G F FV T+LL +Y + G +++ VF M + V+WN+++S
Sbjct: 187 KMVHAQIVMRG-FATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTS 245
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + LF + + V V + D+ G+++ + G + +LV
Sbjct: 246 NGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLV 305
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS--WNTIIGALAESENFGKALELYLRMSVD 236
+L++MY +C + A +F I V+ WN +I ++S +ALELY++M +
Sbjct: 306 GTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQN 365
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF-VGSALVDFYAKCDNLEG 295
+ + T+ V N+ A ++ G+ +H V+K L+ V V +A+ D Y+KC LE
Sbjct: 366 GITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLED 425
Query: 296 AHLCFSEISNKNIVSWNALILGYASKS---SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
F + ++IVSW L+ Y+ S + F L+ + G+ PN+FTFS VL S
Sbjct: 426 VRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMR--EEGFAPNQFTFSSVLISC 483
Query: 353 LAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ L Q+H L+ + G + + + +L+ YAK G I++A
Sbjct: 484 ASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEA---------------- 527
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
K+ ++ PDIVSW +I+ A +G ++ L+LF+ M + I
Sbjct: 528 ----------------GKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIK 571
Query: 469 PDNYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
+ T + +L ACS + G +G++ + E + C +ID+ G+ G
Sbjct: 572 ANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEME-----HYAC--IIDLLGRVG 624
Query: 522 SIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
+ +++ +M + N + W L+ ++G + L + + L +P+ A +L
Sbjct: 625 RLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVE--LGEIAARKILSIRPEYSATYVLL 682
Query: 581 TACR-HGGLVREGMELFERMNRSYGVEPE 608
+ G +G+ L M + GV+ E
Sbjct: 683 SNTYIETGSYEDGLSLRNVM-KDQGVKKE 710
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 129/516 (25%), Positives = 238/516 (46%), Gaps = 43/516 (8%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELLVA-NSLVNMYFQCAGIWSAEKMFKD 201
+ V+ + + + + +HGLV+K+ F D +L+V N ++Y +C+ +A +F +
Sbjct: 67 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 126
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILG 261
+ R+V SW +I E F + + M + P++ + +I SC GL + LG
Sbjct: 127 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 186
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
K +HA+++ +FV ++L++ YAK ++E ++ F+ ++ N VSWNA+I G S
Sbjct: 187 KMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSN 246
Query: 322 SSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL------QLHCLIIRMGYENYEY 374
F L + + PN +T V S +L+ ++ +G E
Sbjct: 247 GLHLEAFDLFVRMKNGACTPNMYTLVSV--SKAVGKLVDVNMGKEVQNCASELGIEGNVL 304
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
V +L+ Y+K G + DA R+V N I N
Sbjct: 305 VGTALIDMYSKCGSLHDA----------RSVFDTNFINCGVN------------------ 336
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
WN +I+ + +G +E LEL+ M I D YT+ S+ +A + +L G +H
Sbjct: 337 --TPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVH 394
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
G++ K + V N + D Y KCG + K+F+ M +R++++WT L++A +
Sbjct: 395 GMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLG 454
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHC 614
+ AL F M GF P++ +VL +C + G ++ + ++ G++ E
Sbjct: 455 EEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKA-GLDTEKCIESA 513
Query: 615 VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++D+ + G + EA K+ + P+ + W + G
Sbjct: 514 LIDMYAKCGSITEAGKVFDKIS-NPDIVSWTAIISG 548
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 116/251 (46%), Gaps = 8/251 (3%)
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N A +Y++ ++ + ++ + ++ SW ++I +G + + + F M + I
Sbjct: 105 NHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGIL 164
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD + + +++ +C L +L LG +H I ++ FV L++MY K GSI S
Sbjct: 165 PDKFAYSAIIQSCIGLDSLELGKMVHAQI-VMRGFATHIFVSTSLLNMYAKLGSIEDSYW 223
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+FN MT+ N ++W A+IS NG A + F M+ P+ L++V A
Sbjct: 224 VFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVD 283
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT------MPFPPNAL 642
V G E+ + G+E + ++D+ + G L +A + T + P NA+
Sbjct: 284 VNMGKEV-QNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAM 342
Query: 643 IWRTFLEGCQR 653
I GC +
Sbjct: 343 ISGYSQSGCSQ 353
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 7/181 (3%)
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC-NMLIDMYGKCGSIGSSVKIFNE 532
+ +L C++ ++ ++HGL+ K+ D V N +Y KC ++ +F+E
Sbjct: 67 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 126
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
M RNV +WT +I +G + F EM G PD+ A A++ +C + +
Sbjct: 127 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSC----IGLDS 182
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK--IITTMPFPPNALIWRTFLEG 650
+EL + ++ + H LL Y L E + M N + W + G
Sbjct: 183 LELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISG 242
Query: 651 C 651
C
Sbjct: 243 C 243
>gi|147765658|emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
Length = 1849
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 199/671 (29%), Positives = 354/671 (52%), Gaps = 23/671 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVE-DALRMF--LYMINRGFEPTQFTFGGLLS-CDSLNPV 56
M R+ V +N ++S + E + +R+F ++M+N +P T +L C L
Sbjct: 1032 MDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEA-KPNSVTIAIVLPVCARLRED 1090
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCL-DEVVSVFEDMPRKSLVTWNSIVSI 115
G + + V+K+GL + G AL+ +Y + G + + + F + K +V+WN++++
Sbjct: 1091 AGKSVHSYVIKSGLE-SHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAG 1149
Query: 116 FGKHGFVEDCMFLFCELVRSEVA---LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-G 171
F ++ F E+ LF +++ + T +S + V L +G+++H V++
Sbjct: 1150 FSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRME 1209
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
++ V NSL++ Y + + AE +F++++ RD+VSWN II A + + KALEL+
Sbjct: 1210 LVEDVSVINSLMSFYLRIXQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFS 1269
Query: 232 R-MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAK 289
+S++ + P+ T V V+ +CA + N + K IH +I++ L D VG+AL+ FYAK
Sbjct: 1270 EFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAK 1329
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHV 348
C+ + A F IS K+++SWNA++ + T + LL +L+ G RP+ T +
Sbjct: 1330 CNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTI 1389
Query: 349 LRSSLAF----QLLQLHCLIIRMG--YENYEYVLGS-LMTSYAKSGLISDALAFVTALNI 401
++ A ++ + H IR G + LG+ ++ +YAK G + A+ +L+
Sbjct: 1390 IQYYAAVSRVKKVKETHSYSIRFGLLQGDAXPTLGNGMLDAYAKCGNMKYAVNIFGSLSE 1449
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
R VV N + Y + +++ + + + D+ +WN+++ A N + L LF
Sbjct: 1450 KRNVVTCNSMISGYVTSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHE 1509
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
++ + PD T +S+L AC+ + ++ + HG + + +D + IDMY KCG
Sbjct: 1510 LQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRA--CFNDVRLNGAFIDMYSKCG 1567
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
S+ + K+F ++++ +TA++ ++G + AL F M LG KPD V + AVL
Sbjct: 1568 SVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLF 1627
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC H GLV EG ++F + + +G +P M+ Y CVVDLL R G +K+A +T MP NA
Sbjct: 1628 ACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANA 1687
Query: 642 LIWRTFLEGCQ 652
IW T L C+
Sbjct: 1688 NIWGTLLGACR 1698
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 166/589 (28%), Positives = 276/589 (46%), Gaps = 34/589 (5%)
Query: 23 EDALRMFLYMI--NRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAFVG 78
++AL +FL + + G++P LL SC + + + G+ L LK G +
Sbjct: 951 DEALSLFLERVRCSVGYKPNGQILAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLC- 1009
Query: 79 TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS-IFGKHGFVEDCMFLFCELVRSEV 137
LL LY + G LD +F +M ++ V WN ++S + G + M LF +
Sbjct: 1010 KGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNE 1069
Query: 138 ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS-AE 196
A S + ++ + + G+ +H VIK+G + L N+L++MY +C + S A
Sbjct: 1070 AKPNSVTIAIVLPVCARLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAY 1129
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
F +E +DVVSWN +I +E++ +A +L+ M + PN T ++ CA L+
Sbjct: 1130 AAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLE 1189
Query: 257 NSI---LGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
+ GK +H V++ L DV V ++L+ FY + +E A F + ++++VSWN
Sbjct: 1190 ENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIXQMEKAEFLFRNMKSRDLVSWN 1249
Query: 313 ALILGYASKSSP-TSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIR 366
A+I GYAS ++ L E + L +P+ T VL + LQ +H IIR
Sbjct: 1250 AIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIR 1309
Query: 367 M-GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA-VVPANIIAGIYNRTGQYNET 424
G V +L++ YAK AL T L I R ++ N I + +G
Sbjct: 1310 HPGLREDTSVGNALLSFYAKCNYTQAALQ--TFLMISRKDLISWNAILDAFTESGCETHL 1367
Query: 425 VKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKY-MRAARIYPDNYTFV--SL 477
V LL + RPD ++ +I A K+V E Y +R + D + +
Sbjct: 1368 VNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAXPTLGNGM 1427
Query: 478 LSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
L A +K N+ ++ G L +K +++ CN +I Y S + IFN M++
Sbjct: 1428 LDAYAKCGNMKYAVNIFGSLSEKRNVVT-----CNSMISGYVTSSSHDDAYAIFNTMSET 1482
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
++ TW ++ N F +AL F E++ G KPD V ++++L AC H
Sbjct: 1483 DLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAH 1531
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 452 YKEVLELF-KYMRAARIY-PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
+ E L LF + +R + Y P+ +LL +C + GS LHG K +S + +
Sbjct: 950 HDEALSLFLERVRCSVGYKPNGQILAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQS-L 1008
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL-GLNGFAQRALEKFREMEFLG 568
C L+++Y K G++ K+F EM R+ + W ++S L G + FR M +
Sbjct: 1009 CKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVN 1068
Query: 569 -FKPDRVALIAVLTAC 583
KP+ V + VL C
Sbjct: 1069 EAKPNSVTIAIVLPVC 1084
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/659 (26%), Positives = 334/659 (50%), Gaps = 41/659 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+R+VVS+NS++S Y + G+ ++ +F M + TF +L +C + G
Sbjct: 130 MPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLG 189
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ ++ G F +D GTAL+ +Y LD ++F +MP ++ V W+++++ + +
Sbjct: 190 LQVHCLAIQMG-FDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVR 248
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + + L+ ++ + +++++F + E G Q+H +K F Y+ +V
Sbjct: 249 NDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIV 308
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ ++MY +C + A K+F S N +I A + +ALE++ + +
Sbjct: 309 GTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYL 368
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
++ + + +C+ ++ + G +H +K L+ ++ V + ++D YAKC L A L
Sbjct: 369 DFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACL 428
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F ++ K+ VSWNA+I + ++ L + +L+ P+++TF V+++ +
Sbjct: 429 IFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKA 488
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L ++H +I+ G +V +++ Y K G++ +A
Sbjct: 489 LNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEA--------------------- 527
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
K+ +LE VSWN +I+ + + L F M + PDN+T
Sbjct: 528 -----------EKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFT 576
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+ ++L C+ L + LG +HG I K ++ SD ++ + ++DMY KCG++ S +F +
Sbjct: 577 YATVLDICANLATVELGKQIHGQILKLQL-HSDVYIASTIVDMYSKCGNMQDSRIMFEKA 635
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
R+ +TW+A+I A +G + A++ F EM+ KP+ I+VL AC H G V +G+
Sbjct: 636 PKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGL 695
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M YG++P+M+HY C+VDLL R G + EA ++I +MPF + +IWRT L C+
Sbjct: 696 HYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICR 754
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 156/567 (27%), Positives = 282/567 (49%), Gaps = 55/567 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
MP+RN V ++++I+ Y R + L+++ M++ G +Q TF SC L+ E G
Sbjct: 231 MPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELG 290
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A LK F D VGTA L +Y + + + VF P + + N+++ + +
Sbjct: 291 TQLHAYALKTN-FGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYAR 349
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
V + + +F L +S + E S G + S + G Q+HGL +K G D+ + V
Sbjct: 350 QDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICV 409
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN++++MY +C + A +F D+EI+D VSWN II A ++E+ + L L++ M +
Sbjct: 410 ANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTM 469
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ TF V+ +CAG + G +H +VIK+ + D FVGSA++D Y KC L A
Sbjct: 470 EPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEK 529
Query: 299 CFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLR--SSLAF 355
+ + VSWN++I G++S K ++ +LQ+G P+ FT++ VL ++LA
Sbjct: 530 IHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLAT 589
Query: 356 QLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L Q+H I+++ + Y+ +++ Y+K G + D+
Sbjct: 590 VELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRI------------------- 630
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+ + + D V+W+ +I A A++G ++ ++LF+ M+ + P++
Sbjct: 631 -------------MFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTI 677
Query: 474 FVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
F+S+L AC+ + + G S +GL + E S ++D+ G+ G + +
Sbjct: 678 FISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSC-------MVDLLGRSGQVNEA 730
Query: 527 VKIFNEMT-DRNVITWTALISALGLNG 552
+++ M + + + W L+ L G
Sbjct: 731 LELIESMPFEADDVIWRTLLGICRLQG 757
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 153/547 (27%), Positives = 259/547 (47%), Gaps = 43/547 (7%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F+ MP + +V+WNS++S + ++GF + +F ++ E+ ++F V+ + +D
Sbjct: 126 LFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIED 185
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
G Q+H L I+ GFD +++ +LV+MY C + A +F ++ R+ V W+ +I
Sbjct: 186 YGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAG 245
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
++ F + L+LY M + + +Q TF SCAGL LG +HA +K D
Sbjct: 246 YVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYD 305
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
VG+A +D YAKCD + A F+ N S NALI+GYA + + LQ
Sbjct: 306 NIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQK 365
Query: 337 GYRP-NEFTFSHVLRSSLA----FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
Y +E + S L + A + +QLH L ++ G + V +++ YAK G + +
Sbjct: 366 SYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALME 425
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
A + +E D VSWN +IAA N
Sbjct: 426 ACL--------------------------------IFDDMEIKDAVSWNAIIAAHEQNEH 453
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+E L LF M + + PD+YTF S++ AC+ L G +HG + K+ + D FV +
Sbjct: 454 VEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSG-MGLDWFVGS 512
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
+IDMY KCG + + KI + +R ++W ++IS + AL F M +G P
Sbjct: 513 AIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIP 572
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAE 629
D VL C + V G ++ ++ + ++ D Y +VD+ + G+++++
Sbjct: 573 DNFTYATVLDICANLATVELGKQIHGQILK---LQLHSDVYIASTIVDMYSKCGNMQDSR 629
Query: 630 KIITTMP 636
+ P
Sbjct: 630 IMFEKAP 636
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 238/484 (49%), Gaps = 26/484 (5%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNP-VEGA 59
P+ S N++I Y+R V +AL +F + + + + G L +C ++ +EG
Sbjct: 333 PNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGI 392
Query: 60 QLQASVLKNGL---FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
QL +K GL C V +L +Y + G L E +F+DM K V+WN+I++
Sbjct: 393 QLHGLAVKCGLDFNIC----VANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAH 448
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ VE+ + LF ++RS + + +F V+ + ++ L +G ++HG VIK+G +
Sbjct: 449 EQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDW 508
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V +++++MY +C + AEK+ + +E R VSWN+II + + AL + RM
Sbjct: 509 FVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQV 568
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+ T+ V++ CA L LGK IH +++K L DV++ S +VD Y+KC N++ +
Sbjct: 569 GVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDS 628
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLR--SSL 353
+ F + ++ V+W+A+I YA L E +QL +PN F VLR + +
Sbjct: 629 RIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHM 688
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-------KSGLISDALAFVTALNIPRAVV 406
F LH + Y L M Y+ +SG +++AL + ++ V
Sbjct: 689 GFVDKGLHYFREMRSH----YGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDV 744
Query: 407 PANIIAGIYNRTGQYNETVKL---LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+ GI G K L QL+ D ++ ++ A G + EV ++ +M+
Sbjct: 745 IWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMK 804
Query: 464 AARI 467
++
Sbjct: 805 NYKL 808
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 82/213 (38%), Gaps = 36/213 (16%)
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF + CS L + G H I T + + FV N L+ Y KC ++ + +F++
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPT-VFVSNCLLQFYCKCLNLNYAFNVFDK 98
Query: 533 MTDRNVITWTALI-------------------------------SALGLNGFAQRALEKF 561
M R+VI+W +I S NGF ++++E F
Sbjct: 99 MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158
Query: 562 REMEFLGFKPDRVALIAVLTACRHGGLVREGMEL-FERMNRSYGVEPEMDHYHCVVDLLV 620
+M L + D VL AC G+ G+ L + G + ++ +VD+
Sbjct: 159 TKMRLLEIQHDYATFAVVLKACT--GIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYS 216
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
L A I MP N++ W + G R
Sbjct: 217 TCKKLDHAFNIFCEMP-ERNSVCWSAVIAGYVR 248
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 207/673 (30%), Positives = 333/673 (49%), Gaps = 43/673 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQL 61
PD VS++S+++AYS +AL F M RG +F +L C + + G Q+
Sbjct: 64 PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKC-APDAGLGVQV 122
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-KSLVTWNSIVSIFGKHG 120
A + GL D FV AL+ +YG G +DE VF++ R ++ V+WN ++S F K+
Sbjct: 123 HAVAVSTGL-SGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKND 181
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
D + LF E+V S V E F V++ + +DLE G ++H +V++ G+D ++ AN
Sbjct: 182 RCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTAN 241
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+LV+MY + I A +F V DVVSWN I + ALEL L+M + P
Sbjct: 242 ALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP 301
Query: 241 NQTTFVYVIN--SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N T ++ + AG LG+ IH +IK + D ++G ALVD YAK L+ A
Sbjct: 302 NVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARK 361
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F I K+++ WNALI G + S+ L + + G N T + VL+S+ + +
Sbjct: 362 VFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEA 421
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ Q+H L ++G+ + +V+ L+ SY K + A
Sbjct: 422 ISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYA--------------------- 460
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
K+ + +I+++ +I A + ++ ++LF M + PD +
Sbjct: 461 -----------NKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFV 509
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
SLL+AC+ L G +H + K + + +D F N L+ Y KCGSI + F+ +
Sbjct: 510 LSSLLNACASLSAYEQGKQVHAHLIKRKFM-TDVFAGNALVYTYAKCGSIEDADLAFSGL 568
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
D+ V++W+A+I L +G +RAL+ FR M P+ + L +VL AC H GLV E
Sbjct: 569 PDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAK 628
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
F M +G++ +HY C++DLL R G L +A +++ +MPF NA +W L +
Sbjct: 629 GYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRV 688
Query: 654 CRIAKYDTLNSTK 666
R + L + K
Sbjct: 689 HRDPELGKLAAEK 701
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 255/534 (47%), Gaps = 47/534 (8%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
GA + A +LK+GL A LL Y + VF++ P V+W+S+V+ +
Sbjct: 23 GAHIHAHLLKSGLLHA---FRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYS 79
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + + F + V E + V L D G Q+H + + G ++
Sbjct: 80 NNALPREALAAFRAMRARGVRCNEFALPIV---LKCAPDAGLGVQVHAVAVSTGLSGDIF 136
Query: 178 VANSLVNMYFQCAGIWSAEKMFKD-VEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VAN+LV MY + A ++F + R+ VSWN ++ A +++ A+EL+ M
Sbjct: 137 VANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWS 196
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN+ F V+N+C G ++ G+ +HA V++ + DVF +ALVD Y+K ++ A
Sbjct: 197 GVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMA 256
Query: 297 HLCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
L F ++ ++VSWNA I G ++ LL+++ G PN FT S +L++
Sbjct: 257 ALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGA 316
Query: 356 QLL------QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
Q+H +I+ ++ +Y+ +L+ YAK GL+ DA
Sbjct: 317 GAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDAR---------------- 360
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
K+ + R D++ WN +I+ C+H G + E L LF MR
Sbjct: 361 ----------------KVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDI 404
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ T ++L + + L ++ + +H L +K + SD+ V N LID Y KC + + K+
Sbjct: 405 NRTTLAAVLKSTASLEAISDTTQVHALAEKIGFL-SDSHVVNGLIDSYWKCNCLRYANKV 463
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
F E + N+I +T++I+AL + A++ F EM G +PD L ++L AC
Sbjct: 464 FEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNAC 517
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 242/484 (50%), Gaps = 22/484 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGA- 59
+P +VVS+N+ IS G+ + AL + L M + G P FT +L +
Sbjct: 263 VPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFA 322
Query: 60 ---QLQASVLKNGLFCADA--FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
Q+ ++K CAD+ ++G AL+ +Y ++G LD+ VFE +PRK L+ WN+++S
Sbjct: 323 LGRQIHGFMIKA---CADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALIS 379
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
G + + LFC + + + ++ V+ ++ + + Q+H L K GF
Sbjct: 380 GCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLS 439
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ V N L++ Y++C + A K+F++ +++++ ++I AL++ ++ A++L++ M
Sbjct: 440 DSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEML 499
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ P+ ++N+CA L GK +HA +IK DVF G+ALV YAKC ++E
Sbjct: 500 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIE 559
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL---- 349
A L FS + +K +VSW+A+I G A ++ + ++ PN T + VL
Sbjct: 560 DADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACN 619
Query: 350 RSSLAFQLLQLHCLIIRM-GYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PRAVVP 407
+ L + + M G + E ++ ++G + DA+ V ++ A V
Sbjct: 620 HAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVW 679
Query: 408 ANIIAGIYNRTGQYNETVKLLSQ---LERPDIVSWNIVIAAC-AHNGDYKEVLELFKYMR 463
++A +R + E KL ++ + P+ ++++A A G + EV ++ K M+
Sbjct: 680 GALLAA--SRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMK 737
Query: 464 AARI 467
+++
Sbjct: 738 DSKV 741
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 178/407 (43%), Gaps = 46/407 (11%)
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
A Q+ LG IHA ++K+ L F L+ FY+KC A F E + VSW+
Sbjct: 15 AATQSLFLGAHIHAHLLKSGL-LHAFRNH-LLSFYSKCRLPGSARRVFDETPDPCHVSWS 72
Query: 313 ALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL-LQLHCLIIRMGYE 370
+L+ Y++ + P ++ G R NEF VL+ + L +Q+H + + G
Sbjct: 73 SLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGLGVQVHAVAVSTGLS 132
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+V AN + +Y G +E ++ +
Sbjct: 133 GDIFV--------------------------------ANALVAMYGGFGFVDEARRVFDE 160
Query: 431 LERP-DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
R + VSWN +++A N + +ELF M + + P+ + F +++AC+ +L
Sbjct: 161 AARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEA 220
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G +H ++ +T D F N L+DMY K G I + +F ++ +V++W A IS
Sbjct: 221 GRKVHAMVVRTG-YDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCV 279
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE--P 607
L+G Q ALE +M+ G P+ L ++L + G R + ++
Sbjct: 280 LHGHDQHALELLLQMKSSGLVPNVFTLSSIL---KACAGAGAGAFALGRQIHGFMIKACA 336
Query: 608 EMDHYHCV--VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ D Y V VD+ +YG L +A K+ +P + L+W + GC
Sbjct: 337 DSDDYIGVALVDMYAKYGLLDDARKVFEWIP-RKDLLLWNALISGCS 382
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 7/172 (4%)
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LL+ + +L LG+ +H + K+ ++ + N L+ Y KC GS+ ++F+E D
Sbjct: 10 LLTRYAATQSLFLGAHIHAHLLKSGLLHA---FRNHLLSFYSKCRLPGSARRVFDETPDP 66
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
++W++L++A N + AL FR M G + + AL VL GL G+++
Sbjct: 67 CHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL---GVQV- 122
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ S G+ ++ + +V + +G + EA ++ NA+ W +
Sbjct: 123 HAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMM 174
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/652 (28%), Positives = 328/652 (50%), Gaps = 32/652 (4%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQ 62
DR+V N+ + + G +E+A+++ +P L DS + +G ++
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVD 117
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+ NG F D+ +G+ L +Y G L E VF+++ + + WN +++ K G
Sbjct: 118 NFIRGNG-FVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF 176
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ LF +++ S V + +F V S+ + + GEQ+HG ++K+GF V NSL
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSL 236
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
V Y + + SA K+F ++ RDV+SWN+II + K L ++++M V + +
Sbjct: 237 VAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDL 296
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T V V CA + LG+++H+ +K + + L+D Y+KC +L+ A F E
Sbjct: 297 ATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFRE 356
Query: 303 ISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
+S++++VS+ ++I GYA + + ++ L E+ + G P+ +T + VL ++LL
Sbjct: 357 MSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD-- 414
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
G +E++ + L F + +N + +Y + G
Sbjct: 415 -----EGKRVHEWIK-------------ENDLGF--------DIFVSNALMDMYAKCGSM 448
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK-YMRAARIYPDNYTFVSLLSA 480
E + S++ DI+SWN +I + N E L LF + R PD T +L A
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 508
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C+ L G +HG I + SD V N L+DMY KCG++ + +F+++ +++++
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYF-SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
WT +I+ G++GF + A+ F +M G + D ++ +++L AC H GLV EG F M
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+EP ++HY C+VD+L R G L +A + I MP PP+A IW L GC+
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCR 679
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 156/569 (27%), Positives = 278/569 (48%), Gaps = 45/569 (7%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGL-LSCDSLNPVEGA-QLQASVL 66
+N +++ ++ G ++ +F M++ G E +TF + S SL V G QL +L
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K+G F VG +L+ Y ++ +D VF++M + +++WNSI++ + +G E +
Sbjct: 223 KSG-FGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGL 281
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
+F +++ S + + ++ V V G ++ + + G +H + +K F E N+L++MY
Sbjct: 282 SVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 341
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+C + SA+ +F+++ R VVS+ ++I A G+A++L+ M + + P+ T
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
V+N CA + GK +H + +N L D+FV +AL+D YAKC +++ A L FSE+ K
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461
Query: 307 NIVSWNALILGYASKSSPTSIFLLIELL--QLGYRPNEFTFSHVLRSSLAFQLL----QL 360
+I+SWN +I GY+ L LL + + P+E T + VL + + ++
Sbjct: 462 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H I+R GY + +V SL+ YAK G A++ A++
Sbjct: 522 HGYIMRNGYFSDRHVANSLVDMYAKCG----------------ALLLAHM---------- 555
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
L + D+VSW ++IA +G KE + LF MR A I D +FVSLL A
Sbjct: 556 ------LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 609
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVI 539
CS + G +++ I ++DM + G + + + M +
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDAT 669
Query: 540 TWTALISALGLN---GFAQRALEKFREME 565
W AL+ ++ A++ EK E+E
Sbjct: 670 IWGALLCGCRIHHDVKLAEKVAEKVFELE 698
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 216/416 (51%), Gaps = 20/416 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
M +R+V+S+NSII+ Y G E L +F+ M+ G E T + + DS G
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + +K D F T LL +Y + G LD +VF +M +S+V++ S+++ + +
Sbjct: 316 RAVHSIGVKACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 374
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + LF E+ ++ + V++ + + L+ G+++H + +N +++ V
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY-LRMSVDI 237
+N+L++MY +C + AE +F ++ ++D++SWNTIIG +++ +AL L+ L +
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P++ T V+ +CA L G+ IH +++N D V ++LVD YAKC L AH
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----RSS 352
+ F +I++K++VSW +I GY +I L ++ Q G +E +F +L S
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 614
Query: 353 LA------FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
L F +++ C I E+Y ++ L A++G + A F+ + IP
Sbjct: 615 LVDEGWRFFNIMRHECK-IEPTVEHYACIVDML----ARTGDLIKAYRFIENMPIP 665
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 195/678 (28%), Positives = 335/678 (49%), Gaps = 55/678 (8%)
Query: 9 FNSIISAYSRCGYVEDALRMFLY-MINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQASV 65
N I++ + + +AL F + N F+ T+ L+ +C S + +G ++ +
Sbjct: 34 MNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHI 93
Query: 66 LKNGLFCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
L + C D + +L +YG+ G L + VF+ MP ++LV++ S+++ + ++G +
Sbjct: 94 LNSN--CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAE 151
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ L+ ++++ ++ + +F +I ++ D+ G+Q+H VIK L+ N+L+
Sbjct: 152 AIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIA 211
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE-SENFGKALELYLRMSVDIVFPNQT 243
MY + + A ++F + ++D++SW++II ++ F L +S + PN+
Sbjct: 212 MYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEY 271
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
F + +C+ L G IH IK+ L + G +L D YA+C L A F +I
Sbjct: 272 IFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI 331
Query: 304 SNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLL 358
+ SWN +I G A+ + ++ + ++ G+ P+ + +L + Q +
Sbjct: 332 ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGM 391
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
Q+H II+ G+ V SL+T Y F + L N+ N
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMYT----------FCSDL-----YCCFNLFEDFRNNA 436
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
D VSWN ++ AC + E+L LFK M + PD+ T +LL
Sbjct: 437 ----------------DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLL 480
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
C ++ +L LGS +H KT + + + F+ N LIDMY KCGS+G + +IF+ M +R+V
Sbjct: 481 RGCVEISSLKLGSQVHCYSLKTGL-APEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDV 539
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
++W+ LI +GF + AL F+EM+ G +P+ V + VLTAC H GLV EG++L+
Sbjct: 540 VSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYAT 599
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC---- 654
M +G+ P +H CVVDLL R G L EAE+ I M P+ ++W+T L C+
Sbjct: 600 MQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVH 659
Query: 655 -------RIAKYDTLNST 665
I K D NST
Sbjct: 660 LAQKAAENILKIDPFNST 677
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 159/584 (27%), Positives = 283/584 (48%), Gaps = 58/584 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+RN+VS+ S+I+ YS+ G +A+R++L M+ P QF FG ++ +C S + V G
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 59 AQLQASVLKNGLFCADAFVG-TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
QL A V+K L + + AL+ +Y R + + VF +P K L++W+SI++ F
Sbjct: 188 KQLHAQVIK--LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS 245
Query: 118 KHGFVEDCMFLFCELVRSEV-ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ GF + + E++ V E F + S+ ++G QIHGL IK+
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA 305
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ SL +MY +C + SA ++F +E D SWN II LA + +A+ ++ +M
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 237 IVFPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
P+ + ++ CA + L G IH+ +IK D+ V ++L+ Y C +L
Sbjct: 366 GFIPDAISLRSLL--CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDL- 422
Query: 295 GAHLCFSEI----SNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVL 349
+ CF+ +N + VSWN ++ P + L +L+ + P+ T ++L
Sbjct: 423 --YCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLL 480
Query: 350 RSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
R + L Q+HC ++ G +++ K+GLI
Sbjct: 481 RGCVEISSLKLGSQVHCYSLKTGLAPEQFI---------KNGLID--------------- 516
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+Y + G + ++ ++ D+VSW+ +I A +G +E L LFK M++A
Sbjct: 517 --------MYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSA 568
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
I P++ TFV +L+ACS + + G L+ ++ IS C+ ++D+ + G +
Sbjct: 569 GIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNE 628
Query: 526 SVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
+ + +EM + +V+ W L+SA G AQ+A E +++
Sbjct: 629 AERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKID 672
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 177/659 (26%), Positives = 334/659 (50%), Gaps = 41/659 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+R+VVS+NS++S Y G ++ +F+ M + TF +L +C + G
Sbjct: 98 MPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLG 157
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ ++ G F D G+AL+ +Y + LD +F +MP ++LV W+++++ + +
Sbjct: 158 LQVHCLAIQMG-FENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQ 216
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + + LF ++++ + +++S++ V + + G Q+HG +K+ F Y+ ++
Sbjct: 217 NDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSII 276
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ ++MY +C + A K+F + S+N II A + KALE++ + +
Sbjct: 277 GTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYL 336
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
++ + + +C+ ++ + G +H +K L ++ V + ++D Y KC L A
Sbjct: 337 SFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACT 396
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F ++ ++ VSWNA+I + ++ L + +L+ P++FT+ V+++ Q
Sbjct: 397 IFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQA 456
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L ++H I++ G +V +L+ Y K G++ +A
Sbjct: 457 LNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEA--------------------- 495
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
K+ +LE VSWN +I+ + + F M + PDN+T
Sbjct: 496 -----------EKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFT 544
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+ ++L C+ + + LG +H I K + SD ++ + L+DMY KCG++ S +F +
Sbjct: 545 YATVLDVCANMATIELGKQIHAQILKLNL-HSDVYIASTLVDMYSKCGNMQDSRLMFEKT 603
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
R+ +TW+A+I A +G ++A++ F EM+ L KP+ I+VL AC H G V +G+
Sbjct: 604 PKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGL 663
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+ M YG++P M+HY C+VDLL R + EA K+I +M F + +IWRT L C+
Sbjct: 664 HYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCK 722
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 146/557 (26%), Positives = 271/557 (48%), Gaps = 39/557 (7%)
Query: 85 YGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
Y G + S+F+ MP + +V+WNS++S + +G + +F + ++ ++F
Sbjct: 82 YAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATF 141
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
V+ S +D G Q+H L I+ GF+ +++ ++LV+MY +C + A ++F+++
Sbjct: 142 SVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPE 201
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
R++V W+ +I +++ F + L+L+ M + +Q+T+ V SCAGL LG +
Sbjct: 202 RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQL 261
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
H +K+ D +G+A +D YAKCD + A F+ + N S+NA+I+GYA +
Sbjct: 262 HGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQG 321
Query: 325 TSIFLLIELLQLGYRP-NEFTFSHVLRSSLA----FQLLQLHCLIIRMGYENYEYVLGSL 379
+ + LQ Y +E + S L + + +QLH L ++ G
Sbjct: 322 LKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCG----------- 370
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
L F + AN I +Y + G E + +ER D VSW
Sbjct: 371 -------------LGF--------NICVANTILDMYGKCGALVEACTIFDDMERRDAVSW 409
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
N +IAA N + + L LF M + + PD++T+ S++ AC+ L G +HG I K
Sbjct: 410 NAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVK 469
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+ + D FV + L+DMYGKCG + + KI + + ++ ++W ++IS ++ A
Sbjct: 470 SG-MGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQR 528
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
F +M +G PD VL C + + G ++ ++ + + ++ +VD+
Sbjct: 529 YFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILK-LNLHSDVYIASTLVDMY 587
Query: 620 VRYGHLKEAEKIITTMP 636
+ G+++++ + P
Sbjct: 588 SKCGNMQDSRLMFEKTP 604
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 222/473 (46%), Gaps = 68/473 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF------GGLLSCDSLN 54
+P+ S+N+II Y+R AL +F + + T +F G L +C +
Sbjct: 300 LPNPPRQSYNAIIVGYARQDQGLKALEIF-----QSLQRTYLSFDEISLSGALTACSVIK 354
Query: 55 -PVEGAQLQASVLKNGL---FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWN 110
+EG QL +K GL C V +L +YG+ G L E ++F+DM R+ V+WN
Sbjct: 355 GHLEGIQLHGLAVKCGLGFNIC----VANTILDMYGKCGALVEACTIFDDMERRDAVSWN 410
Query: 111 SIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
+I++ ++ + + LF ++RS + + ++ V+ + +Q L +G +IHG ++K+
Sbjct: 411 AIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKS 470
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
G + V ++LV+MY +C + AEK+ +E + VSWN+II + + A +
Sbjct: 471 GMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYF 530
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
+M V P+ T+ V++ CA + LGK IHA+++K L DV++ S LVD Y+KC
Sbjct: 531 SQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKC 590
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVL 349
N++ + L F + ++ V+W+A+I YA L E +Q L +PN F VL
Sbjct: 591 GNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVL 650
Query: 350 RSSLA----------FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
R+ FQ++Q H Y L M Y+
Sbjct: 651 RACAHMGYVDKGLHYFQIMQSH------------YGLDPHMEHYS--------------- 683
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
+ + R+ Q NE +KL+ + D V W +++ C G+
Sbjct: 684 ----------CMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGN 726
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 152/545 (27%), Positives = 251/545 (46%), Gaps = 73/545 (13%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
+F ++ SN + L G+Q H +I F + VAN LV Y + + + A K+F +
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67
Query: 203 EIRDVVSWNTIIGALAESENFG-------------------------------KALELYL 231
RDV+SWNT+I AE N G K++E+++
Sbjct: 68 PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
RM + + TF V+ +C+G+++ LG +H I+ E DV GSALVD Y+KC
Sbjct: 128 RMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLR 350
L+GA F E+ +N+V W+A+I GY + L ++L++G ++ T++ V R
Sbjct: 188 KLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247
Query: 351 SSL---AFQL-LQLHCLIIRMGYENYEYVLGS-LMTSYAKSGLISDALAFVTALNIPRAV 405
S AF+L QLH ++ + Y+ ++G+ + YAK +SDA
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFA-YDSIIGTATLDMYAKCDRMSDAW------------ 294
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
K+ + L P S+N +I A + LE+F+ ++
Sbjct: 295 --------------------KVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRT 334
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ D + L+ACS + G LHGL K + + V N ++DMYGKCG++
Sbjct: 335 YLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCG-LGFNICVANTILDMYGKCGALVE 393
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ IF++M R+ ++W A+I+A N + L F M +PD +V+ AC
Sbjct: 394 ACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAG 453
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
+ GME+ R+ +S G+ + +VD+ + G L EAEKI + + W
Sbjct: 454 QQALNYGMEIHGRIVKS-GMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLE-EKTTVSWN 511
Query: 646 TFLEG 650
+ + G
Sbjct: 512 SIISG 516
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 209/650 (32%), Positives = 329/650 (50%), Gaps = 45/650 (6%)
Query: 25 ALRMFLYMINRGFEPTQFTFGGLLSCDS----LNPVEGAQLQASVLKNGLFCADAFVGTA 80
A+ + M+ G P F F +L + LN G QL A V K G A V +
Sbjct: 69 AISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNL--GKQLHAHVFKFGQALPTA-VPNS 125
Query: 81 LLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALT 140
L+ +YG+ G +D VF+++ + V+WNS+++ + E + LF ++ V T
Sbjct: 126 LVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPT 185
Query: 141 ESSFVGVIHGLSNE-QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
+ V V H SN L G+Q+H V++NG D+ N+LV MY + ++ A+ +F
Sbjct: 186 SFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLF 244
Query: 200 KDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNS 258
+ +D+VSWNTII +L++++ F +AL LYL + + V PN T V+ +C+ L+
Sbjct: 245 DVFDDKDLVSWNTIISSLSQNDRFEEAL-LYLHVMLQSGVRPNGVTLASVLPACSHLEML 303
Query: 259 ILGKSIHAKVI-KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
GK IHA V+ N L + FVG ALVD Y C E L F + + I WNA+I G
Sbjct: 304 GCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAG 363
Query: 318 YASKS-SPTSIFLLIELL-QLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYEN 371
Y +I L +E++ +LG PN T S VL R +H +++ G+E
Sbjct: 364 YVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEK 423
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
+YV +LM Y++ G I A + ++N + +V N + Y G++++ + LL +
Sbjct: 424 DKYVQNALMDMYSRMGRIEIARSIFGSMN-RKDIVSWNTMITGYVVCGRHDDALNLLHDM 482
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR---IYPDNYTFVSLLSACSKLCNLA 488
+R G + + F + + P++ T +++L C+ L L
Sbjct: 483 QR----------------GQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALG 526
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G +H K +++S D V + L+DMY KCG + S +F +M+ RNVITW LI A
Sbjct: 527 KGKEIHAYAVK-QMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAY 585
Query: 549 GLNGFAQRALEKFREMEFLG-----FKPDRVALIAVLTACRHGGLVREGMELFERMNRSY 603
G++G + AL+ FR M G +P+ V IA+ + H G+V EG+ LF M +
Sbjct: 586 GMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKH 645
Query: 604 GVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL-IWRTFLEGCQ 652
G+EP DHY C+VDLL R G ++EA +I TMP + W + L C+
Sbjct: 646 GIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACK 695
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 147/578 (25%), Positives = 263/578 (45%), Gaps = 65/578 (11%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSL--NPVEGA 59
+R+ VS+NS+I+A R E A+ +F M+ PT FT + +C +L + G
Sbjct: 148 NRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGK 207
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ A VL+NG + F AL+ +Y + G + E ++F+ K LV+WN+I+S ++
Sbjct: 208 QVHAFVLRNGDW--RTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQN 265
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE-LLV 178
E+ + +++S V + V+ S+ + L G++IH V+ N E V
Sbjct: 266 DRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFV 325
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI- 237
+LV+MY C +F + R + WN +I +E +A+EL++ M ++
Sbjct: 326 GCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELG 385
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ PN T V+ +C ++ + + IH+ V+K E D +V +AL+D Y++ +E A
Sbjct: 386 LSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIAR 445
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY------------------- 338
F ++ K+IVSWN +I GY L+ +Q G
Sbjct: 446 SIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPL 505
Query: 339 RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
+PN T VL A L G + +YA ++S +A +A
Sbjct: 506 KPNSVTLMTVLPGCAALAALG----------------KGKEIHAYAVKQMLSKDVAVGSA 549
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
L +Y + G N + + Q+ ++++WN++I A +G +E L+L
Sbjct: 550 L------------VDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKL 597
Query: 459 FKYM-----RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCN 511
F+ M I P+ T++++ ++ S + G +L +K I +SD + C
Sbjct: 598 FRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYAC- 656
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTD--RNVITWTALISA 547
L+D+ G+ G I + + M + V W++L+ A
Sbjct: 657 -LVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGA 693
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 195/446 (43%), Gaps = 50/446 (11%)
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
S F +A+ Y M V P+ F V+ + AG+Q+ LGK +HA V K V
Sbjct: 63 SSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAV 122
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG---YASKSSPTSIFLLIELLQL 336
++LV+ Y KC +++ A F EI+N++ VSWN++I + +F L+ L +
Sbjct: 123 PNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENV 182
Query: 337 GYRPNEFTFSHVLR--SSLAFQLL---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
G P FT V S+L LL Q+H ++R G D
Sbjct: 183 G--PTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG----------------------D 218
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
F N + +Y + G+ E L + D+VSWN +I++ + N
Sbjct: 219 WRTFTN-----------NALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDR 267
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
++E L M + + P+ T S+L ACS L L G +H + + ++FV
Sbjct: 268 FEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGC 327
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF-LGFK 570
L+DMY C +F+ M R + W A+I+ N F A+E F EM F LG
Sbjct: 328 ALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLS 387
Query: 571 PDRVALIAVLTACRH--GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
P+ V L +VL AC L +EG+ +G E + + ++D+ R G ++ A
Sbjct: 388 PNSVTLSSVLPACVRCESFLDKEGI---HSCVVKWGFEKDKYVQNALMDMYSRMGRIEIA 444
Query: 629 EKIITTMPFPPNALIWRTFLEGCQRC 654
I +M + + W T + G C
Sbjct: 445 RSIFGSMN-RKDIVSWNTMITGYVVC 469
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 144/304 (47%), Gaps = 41/304 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-------------------FEPTQ 41
M +++VS+N++I+ Y CG +DAL + L+ + RG +P
Sbjct: 451 MNRKDIVSWNTMITGYVVCGRHDDALNL-LHDMQRGQAEHRINTFDDYEDNKNFPLKPNS 509
Query: 42 FTFGGLLS-CDSLNPV-EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE 99
T +L C +L + +G ++ A +K + D VG+AL+ +Y + GCL+ +VFE
Sbjct: 510 VTLMTVLPGCAALAALGKGKEIHAYAVKQ-MLSKDVAVGSALVDMYAKCGCLNLSRTVFE 568
Query: 100 DMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS-----EVALTESSFVGVIHGLSNE 154
M ++++TWN ++ +G HG E+ + LF +V E+ E +++ + LS+
Sbjct: 569 QMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHS 628
Query: 155 QDLEFGEQI-HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV--EIRDVVSWN 211
++ G + + + K+G + LV++ + I A + K + ++ V +W+
Sbjct: 629 GMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWS 688
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
+++GA +N LE+ + ++ + Y G + S+LG+ + K ++
Sbjct: 689 SLLGACKIHQN----LEIGEIAAKNLFVLDPNVLDY------GTKQSMLGRKMKEKGVRK 738
Query: 272 ALEC 275
C
Sbjct: 739 EPGC 742
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 196/661 (29%), Positives = 339/661 (51%), Gaps = 45/661 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP + + ++N++I AY G +L ++ M G TF +L +C L G
Sbjct: 176 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCG 235
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIVSIFG 117
A++ +K G + + FV +++G+Y + L+ +F+ MP K +V+WNS++S +
Sbjct: 236 AEVHGLAIKEG-YVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYS 294
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G + + LF E+ ++ +A +FV + + ++ G IH V+K+ + +
Sbjct: 295 SNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVF 354
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VAN+L+ MY + + A +F +++ D +SWN+++ ++ + +AL+ Y M
Sbjct: 355 VANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAG 414
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P+ + +I + A N++ G IHA +KN L+ D+ VG++LVD YAK +++
Sbjct: 415 QKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMD 474
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F ++ +K++VSW +I G+A S + L +QL G + S +L + +
Sbjct: 475 CIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLK 534
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L+ ++H IIR G +SD +V N I
Sbjct: 535 LISSVKEIHSYIIRKG--------------------LSD-------------LVLQNGIV 561
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y G + ++ +E D+VSW +I+ HNG E LELF M+ + PD+
Sbjct: 562 DVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSI 621
Query: 473 TFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ VS+LSA + L L G +HG LI+K ++ + + L+DMY +CG++ S +FN
Sbjct: 622 SLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGS--LASTLVDMYARCGTLEKSRNVFN 679
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ +++++ WT++I+A G++G + A++ FR ME PD +A +AVL AC H GL+ E
Sbjct: 680 FIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNE 739
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G E M Y +EP +HY C+VDLL R HL+EA + + M P A +W L C
Sbjct: 740 GRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGAC 799
Query: 652 Q 652
Q
Sbjct: 800 Q 800
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 169/635 (26%), Positives = 307/635 (48%), Gaps = 53/635 (8%)
Query: 39 PTQFTFGGLLS-----CDSLNPV-EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLD 92
P+QF+ S C S + EG Q+ A ++ + F+ T L+ +YG+ GCL
Sbjct: 108 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 167
Query: 93 EVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS 152
+ +F+ MP K++ TWN+++ + +G + L+ E+ S + L +F ++
Sbjct: 168 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 227
Query: 153 NEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWN 211
+D G ++HGL IK G+ + VANS+V MY +C + A ++F + E DVVSWN
Sbjct: 228 LLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWN 287
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
++I A + + +AL L+ M + PN TFV + +C G IHA V+K+
Sbjct: 288 SMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS 347
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLL 330
+ +VFV +AL+ YA+ + A F + + + +SWN+++ G+ ++
Sbjct: 348 SYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 407
Query: 331 IELLQLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
E+ G +P+ ++ RS +Q+H ++ G ++ V SL+ YAK
Sbjct: 408 HEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAK- 466
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
F + +Y + + ++ D+VSW +IA
Sbjct: 467 --------FCSM---------------------KYMDCI--FDKMPDKDVVSWTTIIAGH 495
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
A NG + LELF+ ++ I D S+L ACS L ++ +H I + + SD
Sbjct: 496 AQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL--SD 553
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
+ N ++D+YG+CG++ + ++F + ++V++WT++IS NG A ALE F M+
Sbjct: 554 LVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKE 613
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
G +PD ++L+++L+A +++G E+ + R G E +VD+ R G L+
Sbjct: 614 TGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRK-GFVLEGSLASTLVDMYARCGTLE 672
Query: 627 EAEKIITTMPFPPNALIWRTF-----LEGCQRCRI 656
++ + + + ++W + + GC R I
Sbjct: 673 KSRNVFNFIR-NKDLVLWTSMINAYGMHGCGRAAI 706
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 152/579 (26%), Positives = 276/579 (47%), Gaps = 50/579 (8%)
Query: 1 MPDR-NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSC-DSLNPVE 57
MP++ +VVS+NS+ISAYS G +ALR+F M P +TF L +C DS +
Sbjct: 277 MPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQ 336
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + A+VLK+ + + FV AL+ +Y R G + E ++F +M ++WNS++S F
Sbjct: 337 GMFIHATVLKSSYYI-NVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFV 395
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G + + + E+ + + + +I + + G QIH +KNG D +L
Sbjct: 396 QNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQ 455
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V NSLV+MY + + + +F + +DVVSW TII A++ + +ALEL+ + ++
Sbjct: 456 VGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEG 515
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ + ++ +C+GL+ K IH+ +I+ L D+ + + +VD Y +C N++ A
Sbjct: 516 IDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAA 574
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQ 356
F I K++VSW ++I Y L L+ + G P+ + +L ++ +
Sbjct: 575 RMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLS 634
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L ++H +IR G+ + GSL A+ +
Sbjct: 635 ALKKGKEIHGFLIRKGF----VLEGSL----------------------------ASTLV 662
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y R G ++ + + + D+V W +I A +G + ++LF+ M I PD+
Sbjct: 663 DMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHI 722
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIIS--SDTFVCNMLIDMYGKCGSIGSSVKIF 530
FV++L ACS + G +K + + +VC L+D+ G+ + + +
Sbjct: 723 AFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVC--LVDLLGRANHLEEAYQFV 780
Query: 531 NEM-TDRNVITWTALISALGLNG---FAQRALEKFREME 565
M + W AL+ A ++ + A +K EM+
Sbjct: 781 KGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMD 819
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 182/561 (32%), Positives = 304/561 (54%), Gaps = 44/561 (7%)
Query: 103 RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ 162
++ LV+W++++S + + + + F +++ E F GV SN++++ G+
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 163 IHGLVIKNG-FDYELLVANSLVNMYFQCAG-IWSAEKMFKDVEIRDVVSWNTIIGALAES 220
I G ++K G F+ ++ V +L++M+ + G + SA K+F + R+VV+W +I +
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
A++L+L M + P++ T V+++CA + LG+ H V+K+ L+ DV VG
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183
Query: 281 SALVDFYAKC---DNLEGAHLCFSEISNKNIVSWNALILGYASKS--SPTSIFLLIELLQ 335
+LVD YAKC +++ A F + N++SW A+I GY +I L +E++Q
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243
Query: 336 LGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
+PN FTFS VL++ + Q++ L+++M + V SL++
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLIS---------- 293
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
+Y+R G K L ++VS+N ++ A A + +
Sbjct: 294 ----------------------MYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLN 331
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+E ELF + A + +TF SLLS S + + G +H I K+ S+ +CN
Sbjct: 332 SEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGF-KSNLHICN 390
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
LI MY +CG+I ++ ++FNEM D NVI+WT++I+ +GFA RALE F +M G P
Sbjct: 391 ALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSP 450
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ V IAVL+AC H GL+ EG++ F+ M +G+ P M+HY CVVDLL R GHL+EA ++
Sbjct: 451 NEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMEL 510
Query: 632 ITTMPFPPNALIWRTFLEGCQ 652
+ +MPF +AL+ RTFL C+
Sbjct: 511 VNSMPFKADALVLRTFLGACR 531
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 154/549 (28%), Positives = 276/549 (50%), Gaps = 58/549 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
R++VS++++IS Y+ +A+ F M+ GF P ++ F G+ +C + + G +
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 62 QASVLKNGLFCADAFVGTALLGLYGR-HGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+LK G F +D VG AL+ ++ + +G L+ VF+ MP +++VTW +++ F + G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F D + LF ++V S + GV+ + L G Q H LV+K+G D ++ V
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGC 184
Query: 181 SLVNMYFQC---AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-ALELYLRMSVD 236
SLV+MY +C + A K+F + + +V+SW II +S + A+EL+L M
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQG 244
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN TF V+ +CA L + LG+ ++A V+K L VG++L+ Y++C N+E A
Sbjct: 245 QVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENA 304
Query: 297 HLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F + KN+VS+N ++ YA S +S + L E+ G N FTF+ +L + +
Sbjct: 305 RKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSI 364
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ Q+H I++ G+++ ++ +L++ Y++ G I A
Sbjct: 365 GAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQ----------------- 407
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++N G N ++SW +I A +G LE F M A + P+
Sbjct: 408 --VFNEMGDGN-------------VISWTSMITGFAKHGFATRALETFHKMLEAGVSPNE 452
Query: 472 YTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
T++++LSACS + ++ G HG++ + E + C ++D+ G+ G +
Sbjct: 453 VTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRME-----HYAC--VVDLLGRSGHLE 505
Query: 525 SSVKIFNEM 533
++++ N M
Sbjct: 506 EAMELVNSM 514
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 263/545 (48%), Gaps = 71/545 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MPDRNVV++ +I+ + + G+ DA+ +FL M+ G+ P +FT G++S C + + G
Sbjct: 105 MPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLG 164
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGR---HGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
Q V+K+GL D VG +L+ +Y + G +D+ VF+ MP ++++W +I++
Sbjct: 165 RQFHCLVMKSGLDL-DVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITG 223
Query: 116 FGKHGFVE-DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + G + + + LF E+V+ +V +F V+ +N D+ GEQ++ LV+K
Sbjct: 224 YVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLAS 283
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V NSL++MY +C + +A K F + +++VS+NTI+ A A+S N +A EL+ +
Sbjct: 284 INCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIE 343
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
N TF +++ + + G+ IH++++K+ + ++ + +AL+ Y++C N+E
Sbjct: 344 GAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIE 403
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F+E+ + N++SW ++I G+A T ++ ++L+ G PNE T+ VL
Sbjct: 404 AAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVL---- 459
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
++ + GLIS+ L ++ + +VP
Sbjct: 460 ---------------------------SACSHVGLISEGLKHFKSMKVEHGIVP------ 486
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
R Y V LL + +G +E +EL M D
Sbjct: 487 ---RMEHYACVVDLLGR------------------SGHLEEAMELVNSM---PFKADALV 522
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+ L AC N+ LG +I + + ++ +L +++ G +I +M
Sbjct: 523 LRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYI--LLSNLHASAGQWEEVAEIRKKM 580
Query: 534 TDRNV 538
+RN+
Sbjct: 581 KERNL 585
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 166/354 (46%), Gaps = 42/354 (11%)
Query: 304 SNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHC 362
+ +++VSW+ALI YA+ +I ++L+ G+ PNE+ F+ V R+ + + L
Sbjct: 3 NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
+I G+ L T Y +S + V +I G
Sbjct: 63 IIF--GF--------LLKTGYFESDV----------------CVGCALIDMFVKGNGDLE 96
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
K+ ++ ++V+W ++I G ++ ++LF M + PD +T ++SAC+
Sbjct: 97 SAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACA 156
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC---GSIGSSVKIFNEMTDRNVI 539
++ L+LG H L+ K+ + D V L+DMY KC GS+ + K+F+ M NV+
Sbjct: 157 EMGLLSLGRQFHCLVMKSG-LDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVM 215
Query: 540 TWTALISALGLNGFAQR-ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
+WTA+I+ +G R A+E F EM KP+ +VL AC + + G +++
Sbjct: 216 SWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYAL 275
Query: 599 MNRSYGVEPEMDHYHCVVDLLV----RYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ V+ + +CV + L+ R G+++ A K + F N + + T +
Sbjct: 276 V-----VKMRLASINCVGNSLISMYSRCGNMENARKAFDVL-FEKNLVSYNTIV 323
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 194/629 (30%), Positives = 314/629 (49%), Gaps = 68/629 (10%)
Query: 58 GAQLQASVLKNGLFCADAF-VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G Q+ A V K G + V +L+ +YG+ G L VF+D+P + V+WNS+++
Sbjct: 349 GKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATL 408
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD-LEFGEQIHGLVIKNGFDYE 175
+ E + LF ++ V T + V V H S+ + + G+Q+H ++NG D
Sbjct: 409 CRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLR 467
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
N+LV MY + + A+ +F + +D+VSWNT+I +L++++ F +AL M V
Sbjct: 468 TYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIV 527
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLE 294
D V P+ T V+ +C+ L+ +G+ IH ++N L + FVG+ALVD Y C +
Sbjct: 528 DGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPK 587
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELL-QLGYRPNEFTFSHVLRSS 352
L F + + + WNAL+ GYA ++ L +E++ + + PN TF+ VL +
Sbjct: 588 KGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPAC 647
Query: 353 LAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ ++ +H I++ G+ +YV +LM
Sbjct: 648 VRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMD--------------------------- 680
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR-- 466
+Y+R G+ + + ++ + DIVSWN +I C G Y + L L M+ +
Sbjct: 681 -----MYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGE 735
Query: 467 ----------------IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
P++ T +++L C+ L L G +H K + ++ D V
Sbjct: 736 DGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQK-LAMDVAVG 794
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG-- 568
+ L+DMY KCG + + ++F++M RNVITW LI A G++G + ALE FR M G
Sbjct: 795 SALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGS 854
Query: 569 ----FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
+P+ V IA+ AC H G+V EG+ LF M S+GVEP DHY C+VDLL R G
Sbjct: 855 NREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGR 914
Query: 625 LKEAEKIITTMPFPPNAL-IWRTFLEGCQ 652
+KEA ++I TMP N + W + L C+
Sbjct: 915 VKEAYELINTMPSNLNKVDAWSSLLGACR 943
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/564 (24%), Positives = 257/564 (45%), Gaps = 32/564 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNP--VE 57
+PDR+ VS+NS+I+ R E +L +F M++ +PT FT + +C +
Sbjct: 393 IPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRL 452
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ A L+NG + AL+ +Y R G +++ ++F K LV+WN+++S
Sbjct: 453 GKQVHAYTLRNGDL--RTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLS 510
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE-L 176
++ E+ + ++ V + V+ S + L G +IH ++NG E
Sbjct: 511 QNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENS 570
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V +LV+MY C +F V R V WN ++ A +E +AL L++ M +
Sbjct: 571 FVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISE 630
Query: 237 IVF-PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
F PN TTF V+ +C + + IH ++K D +V +AL+D Y++ +E
Sbjct: 631 SEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEI 690
Query: 296 AHLCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTF-SHVLRSSL 353
+ F ++ ++IVSWN +I G ++ LL E+ + TF + +
Sbjct: 691 SKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGV 750
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
F+ + + + G + A G + A+ + V + +
Sbjct: 751 PFKPNSVTLMTVLPG-----------CAALAALGKGKEIHAYAVKQKLAMDVAVGSALVD 799
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR------I 467
+Y + G N ++ Q+ ++++WN++I A +G +E LELF+ M A I
Sbjct: 800 MYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVI 859
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS--SDTFVCNMLIDMYGKCGSIGS 525
P+ T++++ +ACS + G L +K + + D + C L+D+ G+ G +
Sbjct: 860 RPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYAC--LVDLLGRSGRVKE 917
Query: 526 SVKIFNEMTD--RNVITWTALISA 547
+ ++ N M V W++L+ A
Sbjct: 918 AYELINTMPSNLNKVDAWSSLLGA 941
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 205/467 (43%), Gaps = 44/467 (9%)
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILG 261
VE R W ++ + S +F A+ Y M P+ F V+ + A + + LG
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349
Query: 262 KSIHAKVIK--NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
K IHA V K +A V V ++LV+ Y KC +L A F +I +++ VSWN++I
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409
Query: 320 S-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL-- 376
+ S+ L +L P FT V + + +R+G + + Y L
Sbjct: 410 RFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGG------VRLGKQVHAYTLRN 463
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
G L T Y + L++ +Y R G+ N+ L + D+
Sbjct: 464 GDLRT-YTNNALVT-----------------------MYARLGRVNDAKALFGVFDGKDL 499
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
VSWN VI++ + N ++E L M + PD T S+L ACS+L L +G +H
Sbjct: 500 VSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCY 559
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
+ + ++FV L+DMY C +F+ + R V W AL++ N F +
Sbjct: 560 ALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQ 619
Query: 557 ALEKFREM-EFLGFKPDRVALIAVLTACRHGGLV--REGMELFERMNRSYGVEPEMDHYH 613
AL F EM F P+ +VL AC + +EG+ + + R +G + + +
Sbjct: 620 ALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGY-IVKRGFGKDKYVQ--N 676
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYD 660
++D+ R G ++ ++ I M + + W T + GC C +YD
Sbjct: 677 ALMDMYSRMGRVEISKTIFGRMN-KRDIVSWNTMITGCIVC--GRYD 720
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 190/656 (28%), Positives = 334/656 (50%), Gaps = 35/656 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MPD +VVS+N+++S Y + G D++ + + M RG P + T LL +C L + G
Sbjct: 96 MPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALG 155
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A +K GL D G+AL+ +YG+ L++ + F M ++ V+W + ++ +
Sbjct: 156 VQIHAVAVKTGLE-MDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQ 214
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + LF ++ R + +++ ++ V + L Q+H IKN F + +V
Sbjct: 215 NEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVV 274
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++V++Y + + A + F + V + N ++ L + +AL+L+ M+ +
Sbjct: 275 GTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGI 334
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ + V ++CA ++ + G +H IK+ + DV V +A++D Y KC L A+L
Sbjct: 335 GFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYL 394
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F E+ ++ VSWNA+I +I L E+L+ G P++FT+ VL++ Q
Sbjct: 395 VFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQS 454
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L EY GS++ A KSGL DA T +++ Y
Sbjct: 455 L--------------EY--GSVVHGKAIKSGLGLDAFVSSTVVDM-------------YC 485
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G E KL ++ ++VSWN +I+ + N +E + F M + PD++T+ +
Sbjct: 486 KCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYAT 545
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+L C+ L + LG +HG I K E++ D ++ + L+DMY KCG++ S+ +F +
Sbjct: 546 VLDTCANLATIELGKQIHGQIIKQEMLG-DEYISSTLVDMYAKCGNMPDSLLMFEKAQKL 604
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+ ++W A+I L+G ALE F M+ P+ +AVL AC H GL+ +G F
Sbjct: 605 DFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYF 664
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M Y +EP+++H+ C+VD+L R +EA K I +MP +A+IW+T L C+
Sbjct: 665 YLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICK 720
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 164/601 (27%), Positives = 281/601 (46%), Gaps = 40/601 (6%)
Query: 32 MINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCL 91
M+ GF PT F LL + G A + + + D +L Y G
Sbjct: 30 MLVSGFMPTTFVSNCLLQ---MYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAHAGDT 86
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
S+F MP +V+WN+++S + + G D + L E+ R VA ++ ++
Sbjct: 87 GAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKAC 146
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
+DL G QIH + +K G + ++ ++LV+MY +C + A + F + R+ VSW
Sbjct: 147 GGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWG 206
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
I ++E + + LEL+++M + +Q + V SCA + + +HA IKN
Sbjct: 207 AAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKN 266
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI 331
D VG+A+VD YAK D+L A F + N + + NA+++G L
Sbjct: 267 KFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTG------LGA 320
Query: 332 ELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
E LQL F + RS + F ++ L + + V G L GL
Sbjct: 321 EALQL--------FQFMTRSGIGFDVVSLSGV-----FSACAEVKGYL------QGLQVH 361
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
LA + ++ V N I +Y + E + ++E+ D VSWN +IAA N
Sbjct: 362 CLAIKSGFDVD--VCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNEC 419
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
Y++ + M + PD++T+ S+L AC+ L +L GS +HG K+ + D FV +
Sbjct: 420 YEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSG-LGLDAFVSS 478
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
++DMY KCG I + K+ + + + +++W ++IS LN ++ A + F EM +G KP
Sbjct: 479 TVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKP 538
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM--DHY--HCVVDLLVRYGHLKE 627
D VL C + + G ++ ++ ++ EM D Y +VD+ + G++ +
Sbjct: 539 DHFTYATVLDTCANLATIELGKQIHGQI-----IKQEMLGDEYISSTLVDMYAKCGNMPD 593
Query: 628 A 628
+
Sbjct: 594 S 594
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 148/529 (27%), Positives = 235/529 (44%), Gaps = 106/529 (20%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L G+ H ++ +GF V+N L+ MY +C G A +F + RD VSWNT++ A
Sbjct: 20 LATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTA 79
Query: 217 LAESENFGKALELY-----------------------LRMSVDI--------VFPNQTTF 245
A + + G A L+ R SV + V P++TT
Sbjct: 80 YAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTL 139
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
++ +C GL++ LG IHA +K LE DV GSALVD Y KC +LE A F +
Sbjct: 140 AVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGE 199
Query: 306 KNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QL 360
+N VSW A I G T + L +++ +LG ++ ++ V RS A L QL
Sbjct: 200 RNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQL 259
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPA--NIIAGIYNR 417
H I+ + V +++ YAK+ + DA AF ++P V A ++ G+ R
Sbjct: 260 HAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAF---FSLPNHTVQACNAMMVGLV-R 315
Query: 418 TGQYNETVKLLSQLERP----DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
TG E ++L + R D+VS + V +ACA E+ Y++ +++
Sbjct: 316 TGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACA---------EVKGYLQGLQVH----- 361
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
C LA+ S D V N ++D+YGKC ++ + +F EM
Sbjct: 362 -------C-----LAIKSGF----------DVDVCVRNAILDLYGKCKALVEAYLVFQEM 399
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR--------- 584
R+ ++W A+I+AL N + + EM G +PD +VL AC
Sbjct: 400 EQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGS 459
Query: 585 --HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
HG ++ G+ L ++ + VVD+ + G + EA+K+
Sbjct: 460 VVHGKAIKSGLGLDAFVSST------------VVDMYCKCGMITEAQKL 496
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 150/379 (39%), Gaps = 71/379 (18%)
Query: 243 TTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
TF ++ CAG S L G++ HA+++ + FV + L+ YA+C A F
Sbjct: 3 ATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVF 62
Query: 301 SEISNKNIVSWNALILGYA---SKSSPTSIF----------------------------- 328
+ +++ VSWN ++ YA + S+F
Sbjct: 63 DVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVG 122
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYA 384
L +E+ + G P+ T + +L++ + L Q+H + ++ G E +L+ Y
Sbjct: 123 LSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYG 182
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
K + DAL F ++ G+ N VSW IA
Sbjct: 183 KCRSLEDALRF-------------------FHGMGERNS-------------VSWGAAIA 210
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
C N Y LELF M+ + + S+ +C+ + L+ LH K + S
Sbjct: 211 GCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNK-FS 269
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
+D V ++D+Y K S+ + + F + + V A++ L G AL+ F+ M
Sbjct: 270 ADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFM 329
Query: 565 EFLGFKPDRVALIAVLTAC 583
G D V+L V +AC
Sbjct: 330 TRSGIGFDVVSLSGVFSAC 348
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
DT N ++ Y G G++ +F M D +V++W AL+S G + ++ EM
Sbjct: 69 DTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMA 128
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR---SYGVEPEMDHYHCVVDLLVRY 622
G PDR L +L AC GGL E + L +++ G+E ++ +VD+ +
Sbjct: 129 RRGVAPDRTTLAVLLKAC--GGL--EDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKC 184
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEGC 651
L++A + M N++ W + GC
Sbjct: 185 RSLEDALRFFHGMG-ERNSVSWGAAIAGC 212
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 196/662 (29%), Positives = 337/662 (50%), Gaps = 45/662 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLL-SCDSLNPVE-GAQ 60
+N+ +N++IS+YSR ++ L F+ MI+ P FT+ ++ +C ++ V G
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ V+K GL D FVG AL+ YG HG + + + +F+ MP ++LV+WNS++ +F +G
Sbjct: 209 VHGLVVKTGL-VEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 121 FVEDCMFLFCELVRSE----VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
F E+ L E++ ++ V V+ + E+++ G+ +HG +K D EL
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV- 235
++ N+L++MY +C I +A+ +FK ++VVSWNT++G + + ++ +M
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 387
Query: 236 -DIVFPNQTTFVYVINSCAGLQNSILG--KSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ V ++ T + + C S L K +H +K + V +A V YAKC +
Sbjct: 388 GEDVKADEVTILNAVPVC--FHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS 351
L A F I +K + SWNALI G+A + P S+ +++ G P+ FT +L +
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ L R+G E + +++ ++ L D +++ L++
Sbjct: 506 CSKLKSL-------RLGKEVHGFII--------RNWLERDLFVYLSVLSL---------- 540
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
Y G+ L +E +VSWN VI NG L +F+ M I
Sbjct: 541 ---YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG 597
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ + + ACS L +L LG H K ++ D F+ LIDMY K GSI S K+FN
Sbjct: 598 ISMMPVFGACSLLPSLRLGREAHAYALK-HLLEDDAFIACSLIDMYAKNGSITQSSKVFN 656
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ +++ +W A+I G++G A+ A++ F EM+ G PD + + VLTAC H GL+ E
Sbjct: 657 GLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHE 716
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT-TMPFPPNALIWRTFLEG 650
G+ ++M S+G++P + HY CV+D+L R G L +A +++ M + IW++ L
Sbjct: 717 GLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS 776
Query: 651 CQ 652
C+
Sbjct: 777 CR 778
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/533 (26%), Positives = 261/533 (48%), Gaps = 45/533 (8%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D + T ++ +Y G D+ VF+ + K+L WN+++S + ++ ++ + F E++
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 134 RSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
+ L + ++ VI + D+ G +HGLV+K G ++ V N+LV+ Y +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAES----ENFGKALELYLRMSVDIVFPNQTTFVYV 248
A ++F + R++VSWN++I +++ E+F E+ P+ T V V
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+ CA + LGK +H +K L+ ++ + +AL+D Y+KC + A + F +NKN+
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358
Query: 309 VSWNALILGYASKSSPTSIFLLIELLQLG---YRPNEFTFSHVL----RSSLAFQLLQLH 361
VSWN ++ G++++ F ++ + G + +E T + + S L +LH
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 418
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
C ++ + E V + + SYAK G +S A + GI ++T
Sbjct: 419 CYSLKQEFVYNELVANAFVASYAKCGSLSYA---------------QRVFHGIRSKT--- 460
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
+ SWN +I A + D + L+ M+ + + PD++T SLLSAC
Sbjct: 461 --------------VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
SKL +L LG +HG I + + D FV ++ +Y CG + + +F+ M D+++++W
Sbjct: 507 SKLKSLRLGKEVHGFIIRN-WLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+I+ NGF RAL FR+M G + ++++ V AC +R G E
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE 618
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 145/598 (24%), Positives = 281/598 (46%), Gaps = 49/598 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR----GFEPTQFTFGGLLS-CDSLNP 55
MP+RN+VS+NS+I +S G+ E++ + M+ F P T +L C
Sbjct: 248 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 56 V---EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
+ +G A L+ + + AL+ +Y + GC+ +F+ K++V+WN++
Sbjct: 308 IGLGKGVHGWAVKLR---LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 364
Query: 113 VSIFGKHGFVEDCMFLFCELVR--SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
V F G + +++ +V E + + + +E L +++H +K
Sbjct: 365 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQ 424
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
F Y LVAN+ V Y +C + A+++F + + V SWN +IG A+S + +L+ +
Sbjct: 425 EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAH 484
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
L+M + + P+ T ++++C+ L++ LGK +H +I+N LE D+FV +++ Y C
Sbjct: 485 LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 544
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVL 349
L F + +K++VSWN +I GY P ++ + +++ G + + V
Sbjct: 545 GELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVF 604
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
A LL +R+G E + Y L L+ DA + ++
Sbjct: 605 G---ACSLLP----SLRLGREAHAYALKHLLE--------DDAFIACSLID--------- 640
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+Y + G ++ K+ + L+ SWN +I +G KE ++LF+ M+ P
Sbjct: 641 ----MYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNP 696
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D+ TF+ +L+AC+ + G +K + + + +IDM G+ G + ++++
Sbjct: 697 DDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRV 756
Query: 530 F-NEMTDR-NVITWTALISALGLNG---FAQRALEKFREMEFLGFKPDRVALIAVLTA 582
EM++ +V W +L+S+ ++ ++ K E+E KP+ L++ L A
Sbjct: 757 VAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELE--PEKPENYVLLSNLYA 812
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 224/513 (43%), Gaps = 40/513 (7%)
Query: 147 VIHGLSNEQDLEFGEQIHGLVI-KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR 205
++ +D+E G +IH LV + ++ ++ MY C + +F + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 206 DVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
++ WN +I + + +E + + LE ++ M S + P+ T+ VI +CAG+ + +G ++
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-S 323
H V+K L DVFVG+ALV FY + A F + +N+VSWN++I ++ S
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 324 PTSIFLLIELLQL----GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
S LL E+++ + P+ T VL +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVL----------------------------PV 301
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+ GL + L + + +V N + +Y++ G + ++VSW
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAA--RIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
N ++ + GD ++ + M A + D T ++ + C L LH
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 421
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
K E + ++ V N + Y KCGS+ + ++F+ + + V +W ALI + + +
Sbjct: 422 LKQEFVYNE-LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 480
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
L+ +M+ G PD + ++L+AC +R G E+ + R++ +E ++ Y V+
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLS 539
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
L + G L + + M + + W T + G
Sbjct: 540 LYIHCGELCTVQALFDAME-DKSLVSWNTVITG 571
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 169/377 (44%), Gaps = 31/377 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--G 58
M D+++VS+N++I+ Y + G+ + AL +F M+ G + + + SL P G
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A LK+ L DAF+ +L+ +Y ++G + + VF + KS +WN+++ +G
Sbjct: 617 REAHAYALKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 675
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN----EQDLEFGEQIHGLVIKNGFDY 174
HG ++ + LF E+ R+ + +F+GV+ ++ + L + +Q+ G
Sbjct: 676 HGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSF---GLKP 732
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKD--VEIRDVVSWNTIIGALAESENFGKALELYLR 232
L +++M + + A ++ + E DV W +++ + +N ++ +
Sbjct: 733 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 792
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ ++ +V + N AGL + + ++ + +L D A C
Sbjct: 793 L-FELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKD-----------AGCSW 840
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
+E FS + + + G+ S SI L +++ ++GYRP+ + H L
Sbjct: 841 IELNRKVFSFVVGERFLD------GFEEIKSLWSI-LEMKISKMGYRPDTMSVQHDLSEE 893
Query: 353 LAFQLLQLHCLIIRMGY 369
+ L+ H + + Y
Sbjct: 894 EKIEQLRGHSEKLALTY 910
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 185/579 (31%), Positives = 287/579 (49%), Gaps = 50/579 (8%)
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
G+HGFV+ + C L S A S V G+ +IH +IK F E
Sbjct: 1 MGRHGFVQKLVGELCFLDSSPFAKLLDSCVRSKSGID-------ARRIHARIIKTQFSSE 53
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIR------------------------------ 205
+ + N LV+ Y +C A K+F + R
Sbjct: 54 IFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPE 113
Query: 206 -DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
D SWN ++ A+ + F +AL ++ M + N+ +F +++CAGL + +G I
Sbjct: 114 PDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQI 173
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-S 323
HA + K+ DV++GSALVD Y+KC + A F ++ +NIVSWN+LI Y +
Sbjct: 174 HALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPA 233
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEYVLG-S 378
++ + + ++ G P+E T + V+ + ++ + LQ+H +++ + VLG +
Sbjct: 234 GKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNA 293
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
L+ YAK +++A + + V +++ G Y R + S + ++VS
Sbjct: 294 LVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCG-YARAASVKAARLMFSNMMEKNVVS 352
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
WN +IA NG+ +E + LF ++ I+P +YTF +LL+AC+ L +L LG H I
Sbjct: 353 WNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQIL 412
Query: 499 KTEII-----SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
K SD FV N LIDMY KCG + +F M +R+V++W A+I NG+
Sbjct: 413 KHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGY 472
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
ALE FR+M G KPD V +I VL+AC H GLV EG F M G+ P DH+
Sbjct: 473 GTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFT 532
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
C+VDLL R G L EA +I TMP P+ ++W + L C+
Sbjct: 533 CMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACK 571
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 158/607 (26%), Positives = 273/607 (44%), Gaps = 113/607 (18%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
N ++ AY +CGY EDA ++F M R
Sbjct: 58 NRLVDAYGKCGYFEDARKVFDRMPQR---------------------------------- 83
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
+ F A+L + + G LDE +VF+ MP +WN++VS F +H E+ + F
Sbjct: 84 ----NTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFF 139
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
++ + L E SF + + DL G QIH L+ K+ + ++ + ++LV+MY +C
Sbjct: 140 VDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKC 199
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A++ F + +R++VSWN++I ++ GKALE+++ M + V P++ T V+
Sbjct: 200 GVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVV 259
Query: 250 NSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCD----------------- 291
++CA G IHA+V+K + D+ +G+ALVD YAKC
Sbjct: 260 SACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNV 319
Query: 292 --------------NLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQL 336
+++ A L FS + KN+VSWNALI GY + ++ L + L +
Sbjct: 320 VSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRE 379
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
P +TF ++L + L+L H I++ G+ + +SG SD
Sbjct: 380 SIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGF-------------WFQSGEESD- 425
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+ N + +Y + G + + ++ D+VSWN +I A NG
Sbjct: 426 ------------IFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYG 473
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS-LHGLIKKTEI---ISSDTF 508
LE+F+ M + PD+ T + +LSACS + G H + +TE+ D F
Sbjct: 474 TNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSM--RTELGLAPMKDHF 531
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREM 564
C ++D+ G+ G + + + M + + W +L++A ++G + EK E+
Sbjct: 532 TC--MVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEI 589
Query: 565 EFLGFKP 571
+ L P
Sbjct: 590 DPLNSGP 596
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 130/527 (24%), Positives = 252/527 (47%), Gaps = 84/527 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+ + S+N+++S +++ E+ALR F+ M + F +++FG LS C L + G
Sbjct: 111 MPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMG 170
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A + K+ + D ++G+AL+ +Y + G + F+ M +++V+WNS+++ + +
Sbjct: 171 IQIHALISKS-RYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQ 229
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELL 177
+G + +F ++ + V E + V+ ++ + G QIH V+K + + +L+
Sbjct: 230 NGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLV 289
Query: 178 VANSLVNMYFQC-------------------------------AGIWSAEKMFKDVEIRD 206
+ N+LV+MY +C A + +A MF ++ ++
Sbjct: 290 LGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKN 349
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
VVSWN +I ++ +A+ L+L + + ++P TF ++N+CA L + LG+ H
Sbjct: 350 VVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHT 409
Query: 267 KVIKNAL------ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
+++K+ E D+FVG++L+D Y KC +E L F + +++VSWNA+I+GYA
Sbjct: 410 QILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQ 469
Query: 321 KSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
T+ + ++L G +P+ T VL
Sbjct: 470 NGYGTNALEIFRKMLVSGQKPDHVTMIGVL------------------------------ 499
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPAN----IIAGIYNRTGQYNETVKLLSQLE-RP 434
++ + +GL+ + + ++ + P + + R G +E L+ + +P
Sbjct: 500 -SACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQP 558
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYM--RAARIYPDNYTFVSLLS 479
D V W ++AAC +G+ +EL KY+ + I P N LLS
Sbjct: 559 DNVVWGSLLAACKVHGN----IELGKYVAEKLMEIDPLNSGPYVLLS 601
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 185/600 (30%), Positives = 308/600 (51%), Gaps = 39/600 (6%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q++ ++++G + + L+ L+ G + E F+ + K++VTWN+I++ +
Sbjct: 80 GKQVRDHIIQSGRQL-NIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYA 138
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G V++ LF ++V + + +F+ V+ S+ L+ G++ H VIK GF +
Sbjct: 139 QLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFR 198
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ +LV+MY + + A ++F + RDV ++N +IG A+S + KA +L+ RM +
Sbjct: 199 IGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEG 258
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN+ +F+ +++ C+ + GK++HA+ + L DV V +AL+ Y C ++EGA
Sbjct: 259 FKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGAR 318
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQ 356
F ++ +++VSW +I GYA S+ F L +Q G +P+ T+ H++ + +
Sbjct: 319 RVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSA 378
Query: 357 LLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L L H ++R G+ V +L+ YAK G I DA
Sbjct: 379 DLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDAR------------------- 419
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
++ + R D+VSW+ +I A NG +E E F M+ + PD
Sbjct: 420 -------------QVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVV 466
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T+++LL+AC L L LG ++ K +++S V N LI+M K GSI + IF
Sbjct: 467 TYINLLNACGHLGALDLGMEIYTQAIKADLVSH-IPVGNALINMNVKHGSIERARYIFEN 525
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
M R+V+TW +I L+G A+ AL+ F M F+P+ V + VL+AC G V EG
Sbjct: 526 MVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEG 585
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F + G+ P M+ Y C+VDLL R G L EAE +I MP PN+ IW T L C+
Sbjct: 586 RRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACR 645
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 155/567 (27%), Positives = 287/567 (50%), Gaps = 36/567 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+ ++ VV++N+II+ Y++ G+V++A +F M++ EP+ TF +L +C S ++ G
Sbjct: 122 VENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLG 181
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A V+K G F +D +GTAL+ +Y + G +D VF+ + ++ + T+N ++ + K
Sbjct: 182 KEFHAQVIKVG-FVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAK 240
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E LF + + SF+ ++ G S + L +G+ +H + G ++ V
Sbjct: 241 SGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRV 300
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
A +L+ MY C I A ++F +++RDVVSW +I AE+ N A L+ M + +
Sbjct: 301 ATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGI 360
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ T++++IN+CA + L + IH++V++ D+ V +ALV YAKC ++ A
Sbjct: 361 QPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQ 420
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F +S +++VSW+A+I Y F L++ P+ T+ ++L +
Sbjct: 421 VFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGA 480
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
L L G E Y T K+ L+S + + A++ N+ G R
Sbjct: 481 LDL-------GMEIY--------TQAIKADLVSH-------IPVGNALINMNVKHGSIER 518
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
+Y + + + D+V+WN++I + +G+ +E L+LF M R P++ TFV +
Sbjct: 519 A-RY-----IFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGV 572
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR- 536
LSACS+ + G + I + ++D+ G+ G + + + N M +
Sbjct: 573 LSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKP 632
Query: 537 NVITWTALISALGLNG---FAQRALEK 560
N W+ L++A + G A+RA E+
Sbjct: 633 NSSIWSTLLAACRIYGNLDVAERAAER 659
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 190/401 (47%), Gaps = 41/401 (10%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T+V + C L+++ LGK + +I++ + +++ + L+ ++ C N+ A F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
+ NK +V+WNA+I GYA F L +++ P+ TF VL + + L+
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179
Query: 360 L----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L H +I++G+ + + +L++ Y K G + A + G+Y
Sbjct: 180 LGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGA---------------RQVFDGLY 224
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
R D+ ++N++I A +GD ++ +LF M+ P+ +F+
Sbjct: 225 KR-----------------DVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFL 267
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+L CS LA G ++H T ++ D V LI MY CGSI + ++F++M
Sbjct: 268 SILDGCSTPEALAWGKAVHAQCMNTGLV-DDVRVATALIRMYMGCGSIEGARRVFDKMKV 326
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
R+V++WT +I N + A F M+ G +PDR+ I ++ AC + E+
Sbjct: 327 RDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREI 386
Query: 596 FERMNRS-YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
++ R+ +G + +D +V + + G +K+A ++ M
Sbjct: 387 HSQVVRAGFGTDLLVD--TALVHMYAKCGAIKDARQVFDAM 425
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 198/665 (29%), Positives = 323/665 (48%), Gaps = 75/665 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPT----QFTFGGLLSCDSLNPV 56
MP+R+ V +N ++ AY + ++ALR F GF P GG+ S S N
Sbjct: 778 MPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRK 837
Query: 57 EGA-QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
A Q++A +K F D+ ++F WN ++
Sbjct: 838 RHAEQVKAYAMKMFPF--------------------DQGSNIF---------AWNKKLTE 868
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
F G + + F L+RS + + V ++ DL+ GEQIH LVIK+ F
Sbjct: 869 FLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPV 928
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V+NSL+NMY + +++AEK F + D++SWNT+I + A++ +A+ + +
Sbjct: 929 VPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLR 988
Query: 236 DIVFPNQTTFVYVINSCAGLQNS---ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
D + P+Q T V+ +C+ LG +H IK + D FV +AL+D Y+K
Sbjct: 989 DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGK 1048
Query: 293 LEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
++ A + ++ SWNA++ GY S S ++ + ++G +E T + +++
Sbjct: 1049 MDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKA 1108
Query: 352 SLAF----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
S Q Q+ I++G+ N +V ++ Y K G + +AL
Sbjct: 1109 SGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNAL-------------- 1154
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+L ++ RPD V+W +I+ NGD L ++ MR + +
Sbjct: 1155 ------------------ELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGV 1196
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD YTF +L+ A S L L G +H + K + S D FV L+DMY KCGS+ +
Sbjct: 1197 QPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY-SLDHFVGTSLVDMYCKCGSVQDAY 1255
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
++F +M R V+ W A++ L +G AL FR M+ G +PD+V I VL+AC H G
Sbjct: 1256 RVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSG 1315
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
L E + F+ M ++YG+ PE++HY C+VD L R G ++EAE +I +MPF +A ++R
Sbjct: 1316 LFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRAL 1375
Query: 648 LEGCQ 652
L C+
Sbjct: 1376 LGACR 1380
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 155/662 (23%), Positives = 294/662 (44%), Gaps = 74/662 (11%)
Query: 3 DRNVVSFNSIISAYSRCG-----YVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE 57
DR++V++NSI++AY++ V + R+F + GF T+ T LL L+
Sbjct: 674 DRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGF- 732
Query: 58 GAQLQASVLKNGL-----FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
+Q S +G F D FV AL+ +Y ++G + + +F+ MP + V WN +
Sbjct: 733 ---VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVM 789
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+ + ++ F ++ + F RS S+ VI G+++ D+ + H +K
Sbjct: 790 LKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNS--DVSNNRKRHAEQVKA-- 845
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
A KMF + ++ +WN + + A++ +
Sbjct: 846 ---------------------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKT 884
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ + + T V ++++ G + LG+ IHA VIK++ V V ++L++ Y+K
Sbjct: 885 LLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGV 944
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
+ A F +++SWN +I YA + +I +LL+ G +P++FT + VLR+
Sbjct: 945 VYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRA 1004
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANI 410
C G E + LGS + YA K G+I+D+ ++
Sbjct: 1005 ----------C---STGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALID---------- 1041
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+Y++ G+ +E LL D+ SWN ++ + ++ LE F M I D
Sbjct: 1042 ---LYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPID 1098
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
T + + A L NL G + K ++D +V + ++DMY KCG + +++++F
Sbjct: 1099 EITLATAIKASGCLINLKQGKQIQAYAIKLG-FNNDLWVSSGVLDMYIKCGDMPNALELF 1157
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
E++ + + WT +IS NG AL + M G +PD ++ A +
Sbjct: 1158 GEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALE 1217
Query: 591 EGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+G ++ + + ++ +DH+ +VD+ + G +++A ++ M + W L
Sbjct: 1218 QGKQIHANVVK---LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDV-RKVVFWNAML 1273
Query: 649 EG 650
G
Sbjct: 1274 LG 1275
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 185/441 (41%), Gaps = 68/441 (15%)
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
DL+ G++ H ++ +G + + N+L+ MY +C + SA ++F RD+V+WN+I+
Sbjct: 626 DLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA 685
Query: 216 ALAE--SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS---ILGKSIHAKVIK 270
A A+ ++ LE + + F T + + S + +++H +K
Sbjct: 686 AYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLL 330
E D+FV ALV+ Y K + A L F ++ ++ V WN ++ Y S
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENS------FQ 799
Query: 331 IELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
E L+ FS RS LHC+I G+ S
Sbjct: 800 DEALRF--------FSAFHRSGFXPDFSNLHCVI---------------------GGVNS 830
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP-----DIVSWNIVIAA 445
D + N ++ E VK + P +I +WN +
Sbjct: 831 D----------------------VSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTE 868
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
H G ++ FK + + I D+ T V +LSA +L LG +H L+ K+
Sbjct: 869 FLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPV 928
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
V N L++MY K G + ++ K F + ++I+W +IS+ N A+ FR++
Sbjct: 929 -VPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLL 987
Query: 566 FLGFKPDRVALIAVLTACRHG 586
G KPD+ L +VL AC G
Sbjct: 988 RDGLKPDQFTLASVLRACSTG 1008
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 136/613 (22%), Positives = 256/613 (41%), Gaps = 88/613 (14%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + A ++ +G D ++ L+ +Y + G L VF+ + LVTWNSI++ +
Sbjct: 630 GKRAHARIVTSGDL-PDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA 688
Query: 118 K-----HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+ + V + LF L ++T + ++ ++ E +HG +K GF
Sbjct: 689 QFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGF 748
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ +L V+ +LVN+Y + + A +F + RD V WN ++ A E+ +AL +
Sbjct: 749 ELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSA 808
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSIL-GKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
P+ + VI G+ + + + HA+ +K
Sbjct: 809 FHRSGFXPDFSNLHCVI---GGVNSDVSNNRKRHAEQVKAY------------------- 846
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLR 350
A F NI +WN + + +I LL+ + T +L
Sbjct: 847 ----AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILS 902
Query: 351 SSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+++ L Q+H L+I+ + V SLM Y+K+G++ A T +N P
Sbjct: 903 AAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEK--TFINSPEL-- 958
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
D++SWN +I++ A N E + F+ +
Sbjct: 959 ----------------------------DLISWNTMISSYAQNNLEMEAICTFRDLLRDG 990
Query: 467 IYPDNYTFVSLLSACSKLCN---LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ PD +T S+L ACS LGS +H K II +D+FV LID+Y K G +
Sbjct: 991 LKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGII-NDSFVSTALIDLYSKGGKM 1049
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ + + D ++ +W A++ + +++ALE F M +G D + L + A
Sbjct: 1050 DEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKAS 1109
Query: 584 RHGGLV--REGMELFERMNRSYGVEPEMDH----YHCVVDLLVRYGHLKEAEKIITTMPF 637
G L+ ++G ++ ++Y ++ ++ V+D+ ++ G + A ++ +
Sbjct: 1110 --GCLINLKQGKQI-----QAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS- 1161
Query: 638 PPNALIWRTFLEG 650
P+ + W T + G
Sbjct: 1162 RPDEVAWTTMISG 1174
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 8/172 (4%)
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
+ +L LG H I + + D ++ N LI MY KCGS+ S+ ++F++ +DR+++TW +
Sbjct: 624 MADLKLGKRAHARIVTSGDLP-DRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 544 LISALG--LNGFAQRALEKFREMEFL---GFKPDRVALIAVLTACRHGGLVREGMELFER 598
+++A + + LE FR L GF R+ L +L C G V+ E
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS-ETVHG 741
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G E ++ +V++ +YG + +A + MP +A++W L+
Sbjct: 742 YAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 177/564 (31%), Positives = 292/564 (51%), Gaps = 46/564 (8%)
Query: 132 LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
LVR S F ++ + +H ++ F E+ + N L+++Y +C
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 192 IWSAEKMFKDVEIR-------------------------------DVVSWNTIIGALAES 220
+ A K+F + R D SWN+++ A+
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
+ F ++LE +++M + N+ +F +++CAGL + +G +HA V K+ DV++G
Sbjct: 126 DRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMG 185
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS--IFLLIELLQLGY 338
SAL+D Y+KC ++ A FS + +N+V+WN+LI Y ++ P S + + + ++ G
Sbjct: 186 SALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCY-EQNGPASEALEVFVRMMDSGL 244
Query: 339 RPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDAL 393
P+E T + V+ + + + LQ+H +++ + VLG +L+ YAK +++A
Sbjct: 245 EPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEAR 304
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
++I V ++++G Y R + S++ + ++VSWN +IA NG+ +
Sbjct: 305 RVFDRMSIRNVVSETSMVSG-YARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENE 363
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI-----ISSDTF 508
E L LF+ ++ I+P +YTF +LLSAC+ L +L LG H + K SD F
Sbjct: 364 EALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIF 423
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V N LIDMY KCGSI ++F +M +R+ ++W A+I NG+ AL+ FR+M G
Sbjct: 424 VGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCG 483
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
KPD V +I VL AC H GLV EG F M +G+ P DHY C+VDLL R G L EA
Sbjct: 484 EKPDHVTMIGVLCACSHAGLVEEGRHYFFSME-EHGLIPLKDHYTCMVDLLGRAGCLNEA 542
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
+ +I MP P+A++W + L C+
Sbjct: 543 KNLIEAMPVNPDAVVWGSLLAACK 566
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 155/609 (25%), Positives = 270/609 (44%), Gaps = 118/609 (19%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
N +I Y +C ++DA ++F M R
Sbjct: 54 NRLIDVYGKCDCLDDARKLFDRMPQR---------------------------------- 79
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
+ F +L+ + + G LDE +F MP +WNS+VS F +H E+ + F
Sbjct: 80 ----NTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYF 135
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
++ R + L E SF + + DL G Q+H LV K+ + ++ + ++L++MY +C
Sbjct: 136 VKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKC 195
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ AE++F + R++V+WN++I ++ +ALE+++RM + P++ T V+
Sbjct: 196 GSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVV 255
Query: 250 NSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCD----------------- 291
++CA L G IHA+V+K N D+ +G+ALVD YAKC
Sbjct: 256 SACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNV 315
Query: 292 --------------NLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL- 336
+++ A FS+++ +N+VSWNALI GY L LL+
Sbjct: 316 VSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRE 375
Query: 337 GYRPNEFTFSHVLR--SSLAFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
P +TF ++L ++LA LL Q H +++ G+E +SG SD
Sbjct: 376 SIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFE-------------FQSGAESD- 421
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+ N + +Y + G + ++ +++ D VSWN +I A NG
Sbjct: 422 ------------IFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYG 469
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL------HGLIKKTEIISSD 506
E L++F+ M PD+ T + +L ACS + G HGLI D
Sbjct: 470 AEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPL-----KD 524
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISALGLNG---FAQRALEKFR 562
+ C ++D+ G+ G + + + M + + + W +L++A ++G + A EK
Sbjct: 525 HYTC--MVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLL 582
Query: 563 EMEFLGFKP 571
E++ P
Sbjct: 583 EIDPWNSGP 591
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 236/493 (47%), Gaps = 71/493 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+ + S+NS++S +++ E++L F+ M F +++FG LS C L + G
Sbjct: 107 MPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMG 166
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A V K+ + D ++G+AL+ +Y + G + VF M ++LVTWNS+++ + +
Sbjct: 167 TQVHALVSKS-RYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQ 225
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELL 177
+G + + +F ++ S + E + V+ ++ L+ G QIH V+K N F +L+
Sbjct: 226 NGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLV 285
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEI-------------------------------RD 206
+ N+LV+MY +C+ + A ++F + I R+
Sbjct: 286 LGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRN 345
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
VVSWN +I ++ +AL L+ + + ++P TF ++++CA L + +LG+ H
Sbjct: 346 VVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHT 405
Query: 267 KVIKNAL------ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
V+K E D+FVG++L+D Y KC ++E F ++ ++ VSWNA+I+GYA
Sbjct: 406 HVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQ 465
Query: 321 KS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
++ + ++L G +P+ T VL + L++ E Y
Sbjct: 466 NGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVE----------EGRHYFF--- 512
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVS 438
S + GLI + ++ + R G NE L+ + PD V
Sbjct: 513 --SMEEHGLIPLKDHYTCMVD-------------LLGRAGCLNEAKNLIEAMPVNPDAVV 557
Query: 439 WNIVIAACAHNGD 451
W ++AAC +G+
Sbjct: 558 WGSLLAACKVHGN 570
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 196/662 (29%), Positives = 337/662 (50%), Gaps = 45/662 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLL-SCDSLNPVE-GAQ 60
+N+ +N++IS+YSR ++ L F+ MI+ P FT+ ++ +C ++ V G
Sbjct: 504 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 563
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ V+K GL D FVG AL+ YG HG + + + +F+ MP ++LV+WNS++ +F +G
Sbjct: 564 VHGLVVKTGLV-EDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 622
Query: 121 FVEDCMFLFCELVRSE----VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
F E+ L E++ ++ V V+ + E+++ G+ +HG +K D EL
Sbjct: 623 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 682
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV- 235
++ N+L++MY +C I +A+ +FK ++VVSWNT++G + + ++ +M
Sbjct: 683 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 742
Query: 236 -DIVFPNQTTFVYVINSCAGLQNSILG--KSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ V ++ T + + C S L K +H +K + V +A V YAKC +
Sbjct: 743 GEDVKADEVTILNAVPVC--FHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 800
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS 351
L A F I +K + SWNALI G+A + P S+ +++ G P+ FT +L +
Sbjct: 801 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 860
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ L R+G E + +++ ++ L D +++ L++
Sbjct: 861 CSKLKSL-------RLGKEVHGFII--------RNWLERDLFVYLSVLSL---------- 895
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
Y G+ L +E +VSWN VI NG L +F+ M I
Sbjct: 896 ---YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG 952
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ + + ACS L +L LG H K ++ D F+ LIDMY K GSI S K+FN
Sbjct: 953 ISMMPVFGACSLLPSLRLGREAHAYALK-HLLEDDAFIACSLIDMYAKNGSITQSSKVFN 1011
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ +++ +W A+I G++G A+ A++ F EM+ G PD + + VLTAC H GL+ E
Sbjct: 1012 GLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHE 1071
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT-TMPFPPNALIWRTFLEG 650
G+ ++M S+G++P + HY CV+D+L R G L +A +++ M + IW++ L
Sbjct: 1072 GLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS 1131
Query: 651 CQ 652
C+
Sbjct: 1132 CR 1133
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/533 (26%), Positives = 261/533 (48%), Gaps = 45/533 (8%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D + T ++ +Y G D+ VF+ + K+L WN+++S + ++ ++ + F E++
Sbjct: 474 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 533
Query: 134 RSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
+ L + ++ VI + D+ G +HGLV+K G ++ V N+LV+ Y +
Sbjct: 534 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 593
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAES----ENFGKALELYLRMSVDIVFPNQTTFVYV 248
A ++F + R++VSWN++I +++ E+F E+ P+ T V V
Sbjct: 594 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 653
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+ CA + LGK +H +K L+ ++ + +AL+D Y+KC + A + F +NKN+
Sbjct: 654 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 713
Query: 309 VSWNALILGYASKSSPTSIFLLIELLQLG---YRPNEFTFSHVL----RSSLAFQLLQLH 361
VSWN ++ G++++ F ++ + G + +E T + + S L +LH
Sbjct: 714 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 773
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
C ++ + E V + + SYAK G +S A + GI ++T
Sbjct: 774 CYSLKQEFVYNELVANAFVASYAKCGSLSYA---------------QRVFHGIRSKT--- 815
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
+ SWN +I A + D + L+ M+ + + PD++T SLLSAC
Sbjct: 816 --------------VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 861
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
SKL +L LG +HG I + + D FV ++ +Y CG + + +F+ M D+++++W
Sbjct: 862 SKLKSLRLGKEVHGFIIRN-WLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 920
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+I+ NGF RAL FR+M G + ++++ V AC +R G E
Sbjct: 921 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE 973
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 145/598 (24%), Positives = 281/598 (46%), Gaps = 49/598 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR----GFEPTQFTFGGLLS-CDSLNP 55
MP+RN+VS+NS+I +S G+ E++ + M+ F P T +L C
Sbjct: 603 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 662
Query: 56 V---EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
+ +G A L+ + + AL+ +Y + GC+ +F+ K++V+WN++
Sbjct: 663 IGLGKGVHGWAVKLR---LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 719
Query: 113 VSIFGKHGFVEDCMFLFCELVR--SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
V F G + +++ +V E + + + +E L +++H +K
Sbjct: 720 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQ 779
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
F Y LVAN+ V Y +C + A+++F + + V SWN +IG A+S + +L+ +
Sbjct: 780 EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAH 839
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
L+M + + P+ T ++++C+ L++ LGK +H +I+N LE D+FV +++ Y C
Sbjct: 840 LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 899
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVL 349
L F + +K++VSWN +I GY P ++ + +++ G + + V
Sbjct: 900 GELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVF 959
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
A LL +R+G E + Y L L+ DA + ++
Sbjct: 960 G---ACSLLP----SLRLGREAHAYALKHLLE--------DDAFIACSLID--------- 995
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+Y + G ++ K+ + L+ SWN +I +G KE ++LF+ M+ P
Sbjct: 996 ----MYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNP 1051
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D+ TF+ +L+AC+ + G +K + + + +IDM G+ G + ++++
Sbjct: 1052 DDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRV 1111
Query: 530 F-NEMTDR-NVITWTALISALGLNG---FAQRALEKFREMEFLGFKPDRVALIAVLTA 582
EM++ +V W +L+S+ ++ ++ K E+E KP+ L++ L A
Sbjct: 1112 VAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELE--PEKPENYVLLSNLYA 1167
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 230/515 (44%), Gaps = 44/515 (8%)
Query: 147 VIHGLSNEQDLEFGEQIHGLVI-KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR 205
++ +D+E G +IH LV + ++ ++ MY C + +F + +
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504
Query: 206 DVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
++ WN +I + + +E + + LE ++ M S + P+ T+ VI +CAG+ + +G ++
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-S 323
H V+K L DVFVG+ALV FY + A F + +N+VSWN++I ++ S
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624
Query: 324 PTSIFLLIELLQL----GYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYV 375
S LL E+++ + P+ T VL + + L H +++ + +
Sbjct: 625 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 684
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
+LM Y+K G I++A + +N + VV N + G ++ G + T +L Q+
Sbjct: 685 NNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM---- 739
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
A D K D T ++ + C L LH
Sbjct: 740 ----------LAGGEDVK---------------ADEVTILNAVPVCFHESFLPSLKELHC 774
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
K E + ++ V N + Y KCGS+ + ++F+ + + V +W ALI + +
Sbjct: 775 YSLKQEFVYNE-LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 833
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
+L+ +M+ G PD + ++L+AC +R G E+ + R++ +E ++ Y V
Sbjct: 834 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSV 892
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ L + G L + + M + + W T + G
Sbjct: 893 LSLYIHCGELCTVQALFDAME-DKSLVSWNTVITG 926
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 169/377 (44%), Gaps = 31/377 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--G 58
M D+++VS+N++I+ Y + G+ + AL +F M+ G + + + SL P G
Sbjct: 912 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 971
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A LK+ L DAF+ +L+ +Y ++G + + VF + KS +WN+++ +G
Sbjct: 972 REAHAYALKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 1030
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN----EQDLEFGEQIHGLVIKNGFDY 174
HG ++ + LF E+ R+ + +F+GV+ ++ + L + +Q+ G
Sbjct: 1031 HGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSF---GLKP 1087
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKD--VEIRDVVSWNTIIGALAESENFGKALELYLR 232
L +++M + + A ++ + E DV W +++ + +N ++ +
Sbjct: 1088 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 1147
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ ++ +V + N AGL + + ++ + +L D A C
Sbjct: 1148 L-FELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKD-----------AGCSW 1195
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
+E FS + + + G+ S SI L +++ ++GYRP+ + H L
Sbjct: 1196 IELNRKVFSFVVGERFLD------GFEEIKSLWSI-LEMKISKMGYRPDTMSVQHDLSEE 1248
Query: 353 LAFQLLQLHCLIIRMGY 369
+ L+ H + + Y
Sbjct: 1249 EKIEQLRGHSEKLALTY 1265
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 190/564 (33%), Positives = 304/564 (53%), Gaps = 43/564 (7%)
Query: 97 VFEDMP-RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNE 154
VFE+ R + WNS++S + K+ D + +F L+ + + +S +F VI
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
G IH LV+K+G+ +++VA+SLV MY + ++ ++F ++ RDV SWNT+I
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
+S KALEL+ RM PN + I++C+ L GK IH K +K E
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIEL 333
D +V SALVD Y KCD LE A F ++ K++V+WN++I GY +K S + + +L +
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 334 LQLGYRPNEFTFSHVLRS-SLAFQLLQ---LHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
+ G RP++ T + +L + S + LL +H +IR YV SL+ Y K G
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCG-- 358
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV-SWNIVIAACAH 448
AN+ ++++T + D+ SWN++I++
Sbjct: 359 -----------------EANLAETVFSKT--------------QKDVAESWNVMISSYIS 387
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
G++ + +E++ M + + PD TF S+L ACS+L L G +H I ++ + +D
Sbjct: 388 VGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRL-ETDEL 446
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+ + L+DMY KCG+ + +IFN + ++V++WT +ISA G +G + AL +F EM+ G
Sbjct: 447 LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG 506
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
KPD V L+AVL+AC H GL+ EG++ F +M YG+EP ++HY C++D+L R G L EA
Sbjct: 507 LKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEA 566
Query: 629 EKIITTMP-FPPNALIWRTFLEGC 651
+II P NA + T C
Sbjct: 567 YEIIQQTPETSDNAELLSTLFSAC 590
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 140/557 (25%), Positives = 259/557 (46%), Gaps = 43/557 (7%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGF-EPTQFTFGGLLSCDSLNPVE--GAQL 61
+V +NS++S YS+ D L +F ++N P FTF ++ E G +
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMI 129
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V+K+G C D V ++L+G+Y + + + VF++MP + + +WN+++S F + G
Sbjct: 130 HTLVVKSGYVC-DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E + LF + S S I S LE G++IH +K GF+ + V ++
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
LV+MY +C + A ++F+ + + +V+WN++I + +E+ RM ++ P+
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
QTT ++ +C+ +N + GK IH VI++ + D++V +L+D Y KC A FS
Sbjct: 309 QTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFS 368
Query: 302 EISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
+ SWN +I Y S + ++ + +++ +G +P+ TF+ VL + L
Sbjct: 369 KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEK 428
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
Q+H I E E +L +L+ +Y+
Sbjct: 429 GKQIHLSISESRLETDELLLSALL--------------------------------DMYS 456
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G E ++ + + + D+VSW ++I+A +G +E L F M+ + PD T ++
Sbjct: 457 KCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLA 516
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM--T 534
+LSAC + G ++ I + +ID+ G+ G + + +I + T
Sbjct: 517 VLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPET 576
Query: 535 DRNVITWTALISALGLN 551
N + L SA L+
Sbjct: 577 SDNAELLSTLFSACCLH 593
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 192/352 (54%), Gaps = 4/352 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+R+V S+N++IS + + G E AL +F M + GFEP + +S C L +E G
Sbjct: 168 MPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERG 227
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ +K G F D +V +AL+ +YG+ CL+ VF+ MPRKSLV WNS++ +
Sbjct: 228 KEIHRKCVKKG-FELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVA 286
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + C+ + ++ ++++ ++ S ++L G+ IHG VI++ + ++ V
Sbjct: 287 KGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYV 346
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SL+++YF+C AE +F + SWN +I + N+ KA+E+Y +M V
Sbjct: 347 NCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGV 406
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ TF V+ +C+ L GK IH + ++ LE D + SAL+D Y+KC N + A
Sbjct: 407 KPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFR 466
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVL 349
F+ I K++VSW +I Y S P +++ E+ + G +P+ T VL
Sbjct: 467 IFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVL 518
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 229/481 (47%), Gaps = 41/481 (8%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESE 221
+H ++ G ++++ SL+N+YF C SA +F++ +IR DV WN+++ +++
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 222 NFGKALELYLR-MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
F LE++ R ++ I P+ TF VI + L LG+ IH V+K+ CDV V
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI-LGYASKSSPTSIFLLIELLQLGYR 339
S+LV YAK + E + F E+ +++ SWN +I Y S + ++ L + G+
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 340 PNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
PN + + + + L ++H ++ G+E EYV +L+ Y K
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGK---------- 255
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
L + R V ++ R +V+WN +I GD K
Sbjct: 256 CDCLEVAREV----------------------FQKMPRKSLVAWNSMIKGYVAKGDSKSC 293
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
+E+ M P T S+L ACS+ NL G +HG + ++ ++++D +V LID
Sbjct: 294 VEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRS-VVNADIYVNCSLID 352
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
+Y KCG + +F++ +W +IS+ G +A+E + +M +G KPD V
Sbjct: 353 LYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVT 412
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+VL AC + +G ++ ++ S +E + ++D+ + G+ KEA +I ++
Sbjct: 413 FTSVLPACSQLAALEKGKQIHLSISESR-LETDELLLSALLDMYSKCGNEKEAFRIFNSI 471
Query: 636 P 636
P
Sbjct: 472 P 472
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 153/326 (46%), Gaps = 34/326 (10%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS-NKNIVSWNALILGYAS 320
K +H +++ L DV + +L++ Y C + A F ++ WN+L+ GY+
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 321 KSS-PTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS 378
S ++ + LL P+ FTF +V+++ G E++
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA---------------YGALGREFLGRM 128
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
+ T KSG + D VV A+ + G+Y + + ++++ ++ D+ S
Sbjct: 129 IHTLVVKSGYVCD-------------VVVASSLVGMYAKFNLFENSLQVFDEMPERDVAS 175
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH-GLI 497
WN VI+ +G+ ++ LELF M ++ P++ + +SACS+L L G +H +
Sbjct: 176 WNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCV 235
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
KK D +V + L+DMYGKC + + ++F +M ++++ W ++I G ++
Sbjct: 236 KKG--FELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSC 293
Query: 558 LEKFREMEFLGFKPDRVALIAVLTAC 583
+E M G +P + L ++L AC
Sbjct: 294 VEILNRMIIEGTRPSQTTLTSILMAC 319
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 131/260 (50%), Gaps = 11/260 (4%)
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKE 454
+ L + R VV + +Y + + + R D+ WN +++ + N + +
Sbjct: 30 ILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHD 89
Query: 455 VLELFKYMRAARI-YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
LE+FK + I PD++TF +++ A L LG +H L+ K+ + D V + L
Sbjct: 90 TLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVC-DVVVASSL 148
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+ MY K +S+++F+EM +R+V +W +IS +G A++ALE F ME GF+P+
Sbjct: 149 VGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNS 208
Query: 574 VALIAVLTACRHGGLVREGMELFER-MNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAEK 630
V+L ++AC + G E+ + + + + E+D Y +VD+ + L+ A +
Sbjct: 209 VSLTVAISACSRLLWLERGKEIHRKCVKKGF----ELDEYVNSALVDMYGKCDCLEVARE 264
Query: 631 IITTMPFPPNALIWRTFLEG 650
+ MP + + W + ++G
Sbjct: 265 VFQKMP-RKSLVAWNSMIKG 283
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 212/672 (31%), Positives = 339/672 (50%), Gaps = 59/672 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRG----FEPTQFTFGGLLS--CDSLN--- 54
RN +S+NSIIS YSR G A +F M G F+P ++TFG L++ C S++
Sbjct: 239 RNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGL 298
Query: 55 -PVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
+E Q+ A V K+G F D +V +AL+ + R G D+ ++FE M +++V+ N ++
Sbjct: 299 CVLE--QMLARVEKSG-FLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLM 355
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN----EQDLEFGEQIHGLVIK 169
K E +F E+ + V + S+V ++ S E+ G ++H VI+
Sbjct: 356 VGLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIR 414
Query: 170 NGF-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
G D ++ + N LVNMY + I A +F+ + +D VSWN++I L ++E A E
Sbjct: 415 TGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAE 474
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
+ RM P+ T + ++SCA L +LG+ IH +K L+ DV V +AL+ YA
Sbjct: 475 SFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYA 534
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALI--LGYASKSSPTSIFLLIELLQLGYRPNEFTFS 346
+ FS + + VSWN++I L + S ++ +++++ G+ + TF
Sbjct: 535 ETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFI 594
Query: 347 HVLR--SSLAFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
++L SSL+ + Q+H L+++ +SD A
Sbjct: 595 NILSAVSSLSLHEVSHQIHALVLKY--------------------CLSDDTAI------- 627
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
N + Y + G+ NE K+ +++ E D VSWN +I+ HN + ++L +
Sbjct: 628 -----GNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWF 682
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M D++TF ++LSAC+ + L G +H + + SD V + L+DMY KCG
Sbjct: 683 MMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRA-CLESDVVVGSALVDMYSKCG 741
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
I + + F M RNV +W ++IS +G ++AL+ F M G PD V + VL+
Sbjct: 742 RIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLS 801
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC H G V EG E F+ M+ Y + P ++H+ C+VDLL R G L E I +MP PN
Sbjct: 802 ACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNV 861
Query: 642 LIWRTFLEGCQR 653
LIWRT L C R
Sbjct: 862 LIWRTVLGACCR 873
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 178/680 (26%), Positives = 317/680 (46%), Gaps = 68/680 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-- 57
M +RN+V++ +IS Y++ G ++A F M+ GF P + FG L +C P
Sbjct: 132 MSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCK 191
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLD---EVVSVFEDMPRKSLVTWNSIV 113
G Q+ + K + +D V L+ +YG CLD + SVF+ + ++ ++WNSI+
Sbjct: 192 LGVQIHGLISKT-RYGSDVVVCNVLISMYG--SCLDSANDARSVFDGIGIRNSISWNSII 248
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALT----ESSFVGVIHGLSNEQDLEFG----EQIHG 165
S++ + G LF + + + + E +F +I + D FG EQ+
Sbjct: 249 SVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVD--FGLCVLEQMLA 306
Query: 166 LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
V K+GF +L V+++LV+ + + A+ +F+ + +R+VVS N ++ L + +
Sbjct: 307 RVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEA 366
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGL----QNSILGKSIHAKVIKNAL-ECDVFVG 280
A +++ M D+V N ++V ++++ + + G+ +HA VI+ L + V +G
Sbjct: 367 AAKVFHEMK-DLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIG 425
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYR 339
+ LV+ YAK + A F + K+ VSWN+LI G ++ S + + + G
Sbjct: 426 NGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSM 485
Query: 340 PNEFTFSHVLRS--SLAFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
P+ FT L S SL + +L Q+HC +++G + V +L+ YA+
Sbjct: 486 PSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAE---------- 535
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN-GDYKE 454
TG + E +K+ S + D VSWN VI A + + +
Sbjct: 536 ----------------------TGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQ 573
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
++ F M TF+++LSA S L + +H L+ K +S DT + N L+
Sbjct: 574 AVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKY-CLSDDTAIGNALL 632
Query: 515 DMYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
YGKCG + KIF M++ R+ ++W ++IS N +A++ M G + D
Sbjct: 633 SCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDS 692
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
+L+AC + GME+ R+ +E ++ +VD+ + G + A +
Sbjct: 693 FTFATILSACASVATLERGMEVHACGIRA-CLESDVVVGSALVDMYSKCGRIDYASRFFE 751
Query: 634 TMPFPPNALIWRTFLEGCQR 653
MP N W + + G R
Sbjct: 752 LMPL-RNVYSWNSMISGYAR 770
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 147/613 (23%), Positives = 276/613 (45%), Gaps = 54/613 (8%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
E +L +K G F + F+ L+ +Y R G L +F++M ++LVTW ++S +
Sbjct: 89 EARELHLQSIKYG-FVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 147
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL--SNEQDLEFGEQIHGLVIKNGFDY 174
++G ++ F ++VR+ +F + S + G QIHGL+ K +
Sbjct: 148 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGS 207
Query: 175 ELLVANSLVNMYFQC-AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+++V N L++MY C A +F + IR+ +SWN+II + + A +L+ M
Sbjct: 208 DVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSM 267
Query: 234 SVDIV----FPNQTTFVYVINS-CAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFY 287
+ + PN+ TF +I + C+ + + + + + A+V K+ D++V SALV +
Sbjct: 268 QKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGF 327
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSH 347
A+ + A F ++ +N+VS N L++G + + + ++ N ++
Sbjct: 328 ARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVV 387
Query: 348 VLRSSLAFQLL--------QLHCLIIRMGYENYEYVLGS-LMTSYAKSGLISDALAFVTA 398
+L + F +L ++H +IR G + + +G+ L+ YAKSG I+DA +
Sbjct: 388 LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACS---- 443
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
+ + D VSWN +I+ N ++ E
Sbjct: 444 ----------------------------VFELMVEKDSVSWNSLISGLDQNECSEDAAES 475
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYG 518
F MR P N+T +S LS+C+ L + LG +H K + +D V N L+ +Y
Sbjct: 476 FHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLG-LDTDVSVSNALLALYA 534
Query: 519 KCGSIGSSVKIFNEMTDRNVITWTALISALG-LNGFAQRALEKFREMEFLGFKPDRVALI 577
+ G +K+F+ M + + ++W ++I AL +A++ F +M G+ RV I
Sbjct: 535 ETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFI 594
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
+L+A L E + Y + + + ++ + G + E EKI M
Sbjct: 595 NILSAVSSLSL-HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSE 653
Query: 638 PPNALIWRTFLEG 650
+ + W + + G
Sbjct: 654 TRDEVSWNSMISG 666
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 220/497 (44%), Gaps = 52/497 (10%)
Query: 158 EFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL 217
E ++H IK GF L ++N+L+N+Y + + SA+K+F ++ R++V+W +I
Sbjct: 88 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 147
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSC--AGLQNSILGKSIHAKVIKNALEC 275
++ +A + M PN F + +C +G LG IH + K
Sbjct: 148 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGS 207
Query: 276 DVFVGSALVDFYAKC-DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
DV V + L+ Y C D+ A F I +N +SWN++I Y+ + S + L +
Sbjct: 208 DVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSM 267
Query: 335 Q-----LGYRPNEFTFSHVLR---SSLAFQLLQLHCLIIRM---GYENYEYVLGSLMTSY 383
Q ++PNE+TF ++ SS+ F L L ++ R+ G+ YV +L++ +
Sbjct: 268 QKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGF 327
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
A+ GL DA + + V ++ G+ + Q K+ +++ D+V N
Sbjct: 328 ARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLV-KQKQGEAAAKVFHEMK--DLVGIN--- 381
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA----LGSSLHGLIKK 499
+ ++V LLSA S+ L G +H + +
Sbjct: 382 ---------------------------SDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIR 414
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
T + + + N L++MY K G+I + +F M +++ ++W +LIS L N ++ A E
Sbjct: 415 TGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAE 474
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
F M G P LI+ L++C G + G E G++ ++ + ++ L
Sbjct: 475 SFHRMRRTGSMPSNFTLISTLSSCASLGWIMLG-EQIHCDGLKLGLDTDVSVSNALLALY 533
Query: 620 VRYGHLKEAEKIITTMP 636
G E K+ + MP
Sbjct: 534 AETGCFTECLKVFSLMP 550
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 189/431 (43%), Gaps = 53/431 (12%)
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+F + TF +IN G S + +H + IK ++F+ + L++ Y + +L A
Sbjct: 67 LFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQ 126
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS----- 351
F E+SN+N+V+W LI GY P + ++++ G+ PN + F LR+
Sbjct: 127 KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 186
Query: 352 -SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
S +Q+H LI + Y + V L++ Y + AN
Sbjct: 187 PSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGS------------------CLDSAND 228
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI--- 467
+++ G N +SWN +I+ + GD +LF M+ +
Sbjct: 229 ARSVFDGIGIRNS-------------ISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFS 275
Query: 468 -YPDNYTFVSLL-SACSKL-CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
P+ YTF SL+ +ACS + L + + ++K+ + D +V + L+ + + G
Sbjct: 276 FKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFL-QDLYVSSALVSGFARFGLTD 334
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTAC 583
+ IF +M RNV++ L+ L + A + F EM + +G D + + +L+A
Sbjct: 335 DAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD--SYVVLLSAF 392
Query: 584 RHGGLV----REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
++ R+G E+ + R+ + ++ + +V++ + G + +A + M
Sbjct: 393 SEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELM-VEK 451
Query: 640 NALIWRTFLEG 650
+++ W + + G
Sbjct: 452 DSVSWNSLISG 462
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
MP RNV S+NS+IS Y+R G+ E AL++F M+ G P TF G+LS C + V EG
Sbjct: 753 MPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEG 812
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIV 113
+ S+ + + ++ L GR G LDEV MP K +++ W +++
Sbjct: 813 FEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 868
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 193/655 (29%), Positives = 324/655 (49%), Gaps = 42/655 (6%)
Query: 7 VSFNSIISAYSRCGYVEDALRMF-LYMINRGFEPTQFTFGGL-LSCDSLNPVE-GAQLQA 63
+S NS I+ + + +AL F + N + T+G L L+C S+ ++ G ++
Sbjct: 122 LSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHD 181
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+LK+ D + +L +YG+ G L + F+ M +++V+W ++S + ++G
Sbjct: 182 HILKSNCQ-PDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQEN 240
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
D + ++ ++++S +F +I D++ G Q+HG VIK+G+D+ L+ N+L+
Sbjct: 241 DAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALI 300
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF-PNQ 242
+MY + I A +F + +D++SW ++I + +AL L+ M + PN+
Sbjct: 301 SMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNE 360
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
F V ++C L G+ IH K L +VF G +L D YAK L A F +
Sbjct: 361 FIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQ 420
Query: 303 ISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQL 357
I + ++VSWNA+I ++ S +I+ +++ G P+ TF +L Q
Sbjct: 421 IESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQG 480
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
Q+H II++G + V SL+T Y K + DA N+ +
Sbjct: 481 TQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAF---------------NVFKDVS-- 523
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
E ++VSWN +++AC + EV LFK M + PDN T ++
Sbjct: 524 --------------ENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTI 569
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L C++L +L +G+ +H K+ ++ D V N LIDMY KCGS+ + +F + +
Sbjct: 570 LGTCAELASLEVGNQVHCFSVKSGLVV-DVSVSNRLIDMYAKCGSLKHARDVFGSTQNPD 628
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+++W++LI G AL FR M+ LG +P+ V + VL+AC H GLV EG +
Sbjct: 629 IVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYN 688
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M G+ P +H C+VDLL R G L EAE I M F P+ +W+T L C+
Sbjct: 689 TMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCK 743
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 156/591 (26%), Positives = 272/591 (46%), Gaps = 51/591 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQL 61
RNVVS+ +IS YS+ G DA+ M++ M+ G+ P TFG ++ C + + G QL
Sbjct: 221 RNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQL 280
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V+K+G + AL+ +Y R G + VF + K L++W S+++ F + G+
Sbjct: 281 HGHVIKSG-YDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGY 339
Query: 122 VEDCMFLFCELVRSEV-ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ ++LF ++ R E F V + + EFG QIHG+ K G +
Sbjct: 340 EIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGC 399
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL +MY + + SA + F +E D+VSWN II A ++S + +A+ + +M + P
Sbjct: 400 SLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMP 459
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ TF+ ++ +C G IH+ +IK L+ + V ++L+ Y KC NL A F
Sbjct: 460 DGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVF 519
Query: 301 SEIS-NKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLL 358
++S N N+VSWNA++ +F L +L+ +P+ T + +L + L
Sbjct: 520 KDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASL 579
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q+HC + KSGL+ D V +N + +
Sbjct: 580 EVGNQVHCFSV-------------------KSGLVVD-------------VSVSNRLIDM 607
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y + G + + PDIVSW+ +I A G E L LF+ M+ + P+ T+
Sbjct: 608 YAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTY 667
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+ +LSACS + + G + ++ I + ++D+ + G + + +M
Sbjct: 668 LGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMG 727
Query: 535 -DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ ++ W L+++ +G A+RA E L P A + +L+
Sbjct: 728 FNPDITMWKTLLASCKTHGNVDIAERAAEN-----ILKLDPSNSAALVLLS 773
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 196/656 (29%), Positives = 343/656 (52%), Gaps = 43/656 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
NVV +N+IIS + AL +F M R F P FTF +L+ C +L +E G +
Sbjct: 211 ENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGV 270
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
Q V+K G D FVGTA++ LY + +D+ V F MP +++V+W +I+S F +
Sbjct: 271 QGWVIKCGA-GEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDD 329
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
F E+ + + + V+ + ++ Q+H + K GF + V+++
Sbjct: 330 SISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSA 389
Query: 182 LVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
L+NMY + + +E++F+++E +++ W +I A A+S + G+A+EL+ RM + + P
Sbjct: 390 LINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRP 449
Query: 241 NQ---TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
++ ++ + +I+S + LG+ IH ++K L D+ VGS+L Y+KC +LE ++
Sbjct: 450 DKFCSSSVLSIIDSLS------LGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESY 503
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F ++ +K+ VSW ++I G++ + ++ L E+L RP++ T + L + A
Sbjct: 504 TVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALH 563
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L+ G E + Y L + + + V+ + +Y+
Sbjct: 564 SLE-------KGKEVHGYALRA---------------------RVGKEVLVGGALVNMYS 595
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G ++ L + D S + +++ A NG ++ L LF +R A ++ D++T S
Sbjct: 596 KCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSS 655
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
++ A + L +L +G+ LH + K + +++ V + L+ MY KCGSI K+F ++
Sbjct: 656 VIGAVAILNSLDIGTQLHACVTKMGL-NAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKP 714
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
++I+WTA+I + +G AL+ + M G KPD V + VL+AC H G+V EG
Sbjct: 715 DLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHL 774
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M + YG+EP HY C+VDLL R G LKEAE+ I MP P+AL+W L C+
Sbjct: 775 NSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACK 830
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 170/653 (26%), Positives = 309/653 (47%), Gaps = 43/653 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEGA 59
P NV+S+N +IS ++ ED+ R F M GF+P QFT+G +LS C +L +P+ G
Sbjct: 108 PHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGE 167
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + LKNG F ++ +V ++ L+ + ++ + VF+D+ +++V WN+I+S K+
Sbjct: 168 LVYSLALKNGFF-SNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKN 226
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ LFC++ +F ++ + ++LEFG + G VIK G ++ V
Sbjct: 227 RENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVG 286
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+++++Y +C + A K F + IR+VVSW TII + ++ A + M
Sbjct: 287 TAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEK 346
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
N T V+ +C +H+ + K D V SAL++ Y+K ++ +
Sbjct: 347 INNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERV 406
Query: 300 FSEI-SNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLR--SSLAF 355
F E+ S KN+ W +I +A S S+ ++ L +LQ G RP++F S VL SL+
Sbjct: 407 FREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSL 466
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L +HC I+++G V SL T +Y
Sbjct: 467 GRL-IHCYILKIGLFTDISVGSSLFT--------------------------------MY 493
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
++ G E+ + Q+ D VSW +I + + ++ ++LF+ M I PD T
Sbjct: 494 SKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLT 553
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
+ L+ACS L +L G +HG + + + V L++MY KCG+I + ++F+ +
Sbjct: 554 AALTACSALHSLEKGKEVHGYALRAR-VGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQ 612
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
++ + ++L+S NG+ + AL F E+ D + +V+ A + G +L
Sbjct: 613 KDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQL 672
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ + G+ E+ +V + + G + E K+ + P+ + W +
Sbjct: 673 HACVTK-MGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIE-KPDLISWTAMI 723
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 155/582 (26%), Positives = 285/582 (48%), Gaps = 43/582 (7%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L A LK + ++ F+ +L+G Y + + + +F+ P ++++WN ++S ++
Sbjct: 67 LHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNF 126
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
ED FC++ S + ++ V+ + +GE ++ L +KNGF V
Sbjct: 127 SFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRA 186
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII-GALAESENFGKALELYLRMSVDIVF 239
+++++ + A ++F+DV +VV WN II GA+ EN+ AL+L+ +M
Sbjct: 187 GMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENW-VALDLFCQMCCRFFM 245
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN TF ++ +CA L+ G+ + VIK DVFVG+A++D YAKC +++ A
Sbjct: 246 PNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKE 305
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSS----LA 354
F + +N+VSW +I G+ K S F E+ ++G + N +T + VL + +
Sbjct: 306 FLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMI 365
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+ +QLH I + G+ V +L+ Y+K G++ +
Sbjct: 366 KEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVD-----------------------L 402
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
R + E+ K ++ W ++I+A A +G +ELF+ M + PD +
Sbjct: 403 SERVFREMESTK--------NLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCS 454
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S+LS +L+LG +H I K + +D V + L MY KCGS+ S +F +M
Sbjct: 455 SSVLSIID---SLSLGRLIHCYILKIGLF-TDISVGSSLFTMYSKCGSLEESYTVFEQMP 510
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
D++ ++W ++I+ + A++A++ FREM +PD++ L A LTAC + +G E
Sbjct: 511 DKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKE 570
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+ R+ V E+ +V++ + G + A ++ +P
Sbjct: 571 VHGYALRAR-VGKEVLVGGALVNMYSKCGAIVLARRVFDMLP 611
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 150/565 (26%), Positives = 262/565 (46%), Gaps = 53/565 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV---E 57
MP RNVVS+ +IIS + + A F M G + +T +L+ PV E
Sbjct: 309 MPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTA-CTEPVMIKE 367
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM-PRKSLVTWNSIVSIF 116
QL + + K G + D+ V +AL+ +Y + G +D VF +M K+L W ++S F
Sbjct: 368 AVQLHSWIFKTGFY-LDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAF 426
Query: 117 GKHGFVEDCMFLFCELVRSEV---ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
+ G + LF +++ + SS + +I LS G IH ++K G
Sbjct: 427 AQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLS------LGRLIHCYILKIGLF 480
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
++ V +SL MY +C + + +F+ + +D VSW ++I +E ++ +A++L+ M
Sbjct: 481 TDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREM 540
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
++ + P+Q T + +C+ L + GK +H ++ + +V VG ALV+ Y+KC +
Sbjct: 541 LLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAI 600
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSS 352
A F + K+ S ++L+ GYA LL +++ + FT S V+ +
Sbjct: 601 VLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAV 660
Query: 353 LAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
L QLH + +MG V SL+T Y+K G I
Sbjct: 661 AILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSI------------------- 701
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+E K+ Q+E+PD++SW +I + A +G E L+++ MR
Sbjct: 702 -------------DECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTK 748
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD+ TFV +LSACS + G S + K I + ++D+ G+ G + + +
Sbjct: 749 PDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAER 808
Query: 529 IFNEMT-DRNVITWTALISALGLNG 552
N M + + + W L++A ++G
Sbjct: 809 FINNMPIEPDALLWGILLAACKVHG 833
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 226/465 (48%), Gaps = 40/465 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPVEGAQLQ 62
+N+ + +ISA+++ G A+ +F M+ G P +F +LS DSL+ G +
Sbjct: 414 KNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSL--GRLIH 471
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+LK GLF D VG++L +Y + G L+E +VFE MP K V+W S+++ F +H
Sbjct: 472 CYILKIGLF-TDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHA 530
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
E + LF E++ E+ + + + S LE G+++HG ++ E+LV +L
Sbjct: 531 EQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGAL 590
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
VNMY +C I A ++F + +D S ++++ A++ AL L+ + + ++ +
Sbjct: 591 VNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDS 650
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T VI + A L + +G +HA V K L +V VGS+LV Y+KC +++ H F +
Sbjct: 651 FTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQ 710
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLH 361
I +++SW A+I+ YA + +L++ G +P+ TF VL + H
Sbjct: 711 IEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSAC-------SH 763
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
++ GY + L S+ Y I + + R+G+
Sbjct: 764 NGMVEEGYSH----LNSMAKEYG----------------IEPGYYHYACMVDLLGRSGRL 803
Query: 422 NETVKLLSQLE-RPDIVSWNIVIAACAHNGDY-------KEVLEL 458
E + ++ + PD + W I++AAC +GD K V+EL
Sbjct: 804 KEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIEL 848
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
S C L LH KT I+ S+TF+ N L+ Y K S+ ++++F++ NVI+W
Sbjct: 56 SGRCTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISW 115
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
LIS N + + F +M F GF P++ +VL+AC
Sbjct: 116 NILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSAC 157
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 199/615 (32%), Positives = 321/615 (52%), Gaps = 53/615 (8%)
Query: 49 SCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVT 108
SC ++N + QL A +L G D + T L+ LY G L + F+ + RK++ +
Sbjct: 60 SCTNINVAK--QLHALLLVLGK-AQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFS 116
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLV 167
WNS+VS + + G D M EL+ S V +F V+ + D GE++H V
Sbjct: 117 WNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWV 173
Query: 168 IKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKAL 227
+K GF++++ VA SL+++Y + + A K+F D+ +RDV SWN +I ++ N +AL
Sbjct: 174 LKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEAL 233
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
+ RM + V + T ++ CA + + G +H VIK+ LE DVFV +AL++ Y
Sbjct: 234 RVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMY 293
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFS 346
+K L+ A F + +++VSWN++I Y P T++ E+L +G RP+ T
Sbjct: 294 SKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTV- 352
Query: 347 HVLRSSLAFQLLQ------LHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTAL 399
V +S+ QL +H ++R + + V+G +L+ YAK G ++
Sbjct: 353 -VSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLG----------SI 401
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ RAV QL D++SWN +I A NG E ++ +
Sbjct: 402 DCARAV----------------------FEQLPSRDVISWNTLITGYAQNGLASEAIDAY 439
Query: 460 KYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMY 517
M R I P+ T+VS+L A S + L G +HG LIK + D FV LIDMY
Sbjct: 440 NMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFL--DVFVATCLIDMY 497
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
GKCG + ++ +F E+ + W A+IS+LG++G ++AL+ F++M G K D + +
Sbjct: 498 GKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFV 557
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
++L+AC H GLV E F+ M + Y ++P + HY C+VDL R G+L++A +++ MP
Sbjct: 558 SLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPI 617
Query: 638 PPNALIWRTFLEGCQ 652
+A IW T L C+
Sbjct: 618 QADASIWGTLLAACR 632
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 149/558 (26%), Positives = 284/558 (50%), Gaps = 37/558 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLL-SCDSLNPVEGAQL 61
+N+ S+NS++SAY R G D++ +++ G P +TF +L +C SL +G ++
Sbjct: 112 KNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSL--ADGEKM 169
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
VLK G F D +V +L+ LY R G ++ VF DMP + + +WN+++S F ++G
Sbjct: 170 HCWVLKMG-FEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGN 228
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
V + + + + EV + + ++ + D+ G +H VIK+G + ++ V+N+
Sbjct: 229 VAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNA 288
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+NMY + + A+++F +E+RD+VSWN+II A ++++ AL + M + P+
Sbjct: 289 LINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPD 348
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCDNLEGAHLCF 300
T V + + L + +G+++H V++ LE D+ +G+ALV+ YAK +++ A F
Sbjct: 349 LLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVF 408
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR--PNEFTFSHVLRSSLAFQLL 358
++ +++++SWN LI GYA + +++ G PN+ T+ +L +
Sbjct: 409 EQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPA------- 461
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
Y +V G+L G + F+ V A + +Y +
Sbjct: 462 -------------YSHV-GALQQGMKIHGRLIKNCLFLD-------VFVATCLIDMYGKC 500
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
G+ + + L ++ + V WN +I++ +G ++ L+LFK MRA + D+ TFVSLL
Sbjct: 501 GRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLL 560
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRN 537
SACS + ++K I + ++D++G+ G + + + + M +
Sbjct: 561 SACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQAD 620
Query: 538 VITWTALISALGLNGFAQ 555
W L++A ++G A+
Sbjct: 621 ASIWGTLLAACRIHGNAE 638
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 234/497 (47%), Gaps = 60/497 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP R+V S+N++IS + + G V +ALR+ M + T +L C N V G
Sbjct: 208 MPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGG 267
Query: 60 QL-QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L V+K+GL +D FV AL+ +Y + G L + VF+ M + LV+WNSI++ + +
Sbjct: 268 VLVHLYVIKHGLE-SDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQ 326
Query: 119 H-------GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-N 170
+ GF ++ +F+ +R ++ LT S + LS D G +HG V++
Sbjct: 327 NDDPVTALGFFKEMLFVG---MRPDL-LTVVSLASIFGQLS---DRRIGRAVHGFVVRCR 379
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
+ ++++ N+LVNMY + I A +F+ + RDV+SWNT+I A++ +A++ Y
Sbjct: 380 WLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAY 439
Query: 231 LRMSVD-IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
M + PNQ T+V ++ + + + G IH ++IKN L DVFV + L+D Y K
Sbjct: 440 NMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGK 499
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALI--LGYASKSSPTSIFLLIELLQLGYRPNEFTFSH 347
C LE A F EI + V WNA+I LG ++ L ++ G + + TF
Sbjct: 500 CGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGE-KALQLFKDMRADGVKADHITFV- 557
Query: 348 VLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
SL+++ + SGL+ +A + + P
Sbjct: 558 ------------------------------SLLSACSHSGLVDEAQWCFDTMQKEYRIKP 587
Query: 408 A----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
+ ++ R G + L+S + + D W ++AAC +G+ + L F
Sbjct: 588 NLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAE--LGTFASD 645
Query: 463 RAARIYPDNYTFVSLLS 479
R + +N + LLS
Sbjct: 646 RLLEVDSENVGYYVLLS 662
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 190/409 (46%), Gaps = 40/409 (9%)
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
F V SC + + K +HA ++ DV + + LV YA +L + F I
Sbjct: 54 FNLVFRSCTNIN---VAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 305 NKNIVSWNALILGYASKSS-PTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF-QLLQLH 361
KNI SWN+++ Y + S+ + ELL L G RP+ +TF VL++ L+ ++H
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMH 170
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
C +++MG+E+ YV SL+ +Y+R G
Sbjct: 171 CWVLKMGFEHDVYVAASLIH--------------------------------LYSRFGAV 198
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
K+ + D+ SWN +I+ NG+ E L + M+ + D T S+L C
Sbjct: 199 EVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPIC 258
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
++ ++ G +H + K + SD FV N LI+MY K G + + ++F+ M R++++W
Sbjct: 259 AQSNDVVGGVLVHLYVIKHGL-ESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSW 317
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
++I+A N AL F+EM F+G +PD + ++++ + R G + + R
Sbjct: 318 NSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVR 377
Query: 602 SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+E ++ + +V++ + G + A + +P + + W T + G
Sbjct: 378 CRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLP-SRDVISWNTLITG 425
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/612 (30%), Positives = 311/612 (50%), Gaps = 38/612 (6%)
Query: 49 SCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVT 108
SC +L + +L + D +VG+AL+ +Y G LD VF+ M + V
Sbjct: 156 SCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVL 215
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
WN ++ + K G V + LF + S ++ + + E DL G Q+H L +
Sbjct: 216 WNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAV 275
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
K G + E+ VAN+LV+MY +C + A ++F + D+V+WN +I ++ AL
Sbjct: 276 KYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALR 335
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
L+ M + P+ T ++ + L GK IH +++N DVF+ SALVD Y
Sbjct: 336 LFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYF 395
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSH 347
KC ++ A F + ++V + +I GY ++ S ++ + LL LG +PN +
Sbjct: 396 KCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVAS 455
Query: 348 VLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
L + + + +LH +++ YE YV +LM
Sbjct: 456 TLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMD---------------------- 493
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+Y++ G+ + + + S++ D V+WN +I++ A NG+ +E L+LF+ M
Sbjct: 494 ----------MYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMI 543
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ +N T S+LSAC+ L + G +HG+I K I +D F + LIDMYGKCG++
Sbjct: 544 MEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPI-RADLFAESALIDMYGKCGNL 602
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
++++F M ++N ++W ++ISA G +G + +++ M+ GFK D V +A+++AC
Sbjct: 603 ELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISAC 662
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
H G V+EG+ LF M Y +EP+++H C+VDL R G L +A + I MPF P+A I
Sbjct: 663 AHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGI 722
Query: 644 WRTFLEGCQRCR 655
W L C+ R
Sbjct: 723 WGALLHACRVHR 734
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 139/556 (25%), Positives = 267/556 (48%), Gaps = 43/556 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
M +R+ V +N ++ Y + G V A+ +F M G +P T LS + + G
Sbjct: 208 MDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSG 267
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL +K GL + V L+ +Y + CL+E +F MPR LVTWN ++S +
Sbjct: 268 VQLHTLAVKYGLE-PEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQ 326
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G V+D + LFC++ +S + + ++ L+ + G++IHG +++N ++ +
Sbjct: 327 NGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFL 386
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++LV++YF+C + A+ +F + DVV +T+I + A++++ + +
Sbjct: 387 VSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGI 446
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN + +CA + +G+ +H V+KNA E +V SAL+D Y+KC L+ +H
Sbjct: 447 KPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHY 506
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
FS++S K+ V+WN++I +A P ++ L +++ G + N T S +L +
Sbjct: 507 MFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPA 566
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTS-YAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ ++H +II+ G + +A+S LI
Sbjct: 567 IYYGKEIHGIIIK----------GPIRADLFAESALID---------------------- 594
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G +++ + + VSWN +I+A +G KE ++L M+ D+
Sbjct: 595 -MYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHV 653
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF++L+SAC+ + G L + + I + ++D+Y + G + +++ +
Sbjct: 654 TFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIAD 713
Query: 533 MTDR-NVITWTALISA 547
M + + W AL+ A
Sbjct: 714 MPFKPDAGIWGALLHA 729
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 123/283 (43%), Gaps = 11/283 (3%)
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANI---IAGIYNRTGQYNETVKLLSQLER 433
G + S+ GL A A + L PA + + G+Y ++ + V + S L R
Sbjct: 45 GCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVAVFSSLPR 104
Query: 434 PDI---VSWNIVIAACAHNGDYKEVLELFKYMRA--ARIYPDNYTFVSLLSACSKLCNLA 488
+ WN +I G ++ + + M A + PD +T ++ +C+ L L
Sbjct: 105 AAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALH 164
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
LG +H + + D +V + LI MY G + + ++F+ M +R+ + W ++
Sbjct: 165 LGRLVHRTTRALGL-DRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGY 223
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
G A+ FR M G P+ L L+ C + G++L + YG+EPE
Sbjct: 224 VKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQL-HTLAVKYGLEPE 282
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ + +V + + L+EA ++ MP + + W + GC
Sbjct: 283 VAVANTLVSMYAKCQCLEEAWRLFGLMP-RDDLVTWNGMISGC 324
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 191/660 (28%), Positives = 320/660 (48%), Gaps = 44/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
+ + N+VS+ S++ Y+ G+ ++ L ++ ++ + G T T ++ + + G
Sbjct: 310 IEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMG 369
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ V+K+GL + V +L+ ++G + ++E VF +M + ++WNSI++
Sbjct: 370 YQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAH 429
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G E+ + F + R+ + ++ + Q L++G +HGL+ K+G + + V
Sbjct: 430 NGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCV 489
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY Q AE +F + RD++SWN+++ + E + A+ L + M
Sbjct: 490 CNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRK 549
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N TF +++C L+ K +HA VI A+ ++ +G+ LV Y K ++ A
Sbjct: 550 AMNYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQK 606
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
+ +++V+WNALI G+A P + L++ G N T ++L + ++
Sbjct: 607 VCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDY 666
Query: 358 L-----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L +H I+ G+E YV SL+T YA+
Sbjct: 667 LLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQ--------------------------- 699
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
G N + + L + +WN + +A AH G +E L+ MR + D +
Sbjct: 700 -----CGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQF 754
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+F L+ L L G LH I K D +V N +DMYGKCG I +I
Sbjct: 755 SFSVALATIGNLTVLDEGQQLHSWIIKLGF-ELDEYVLNATMDMYGKCGEIDDVFRILPI 813
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
R+ +W LISAL +GF ++A E F EM LG KPD V +++L+AC HGGLV EG
Sbjct: 814 PKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEG 873
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F M +GV ++H C++DLL R G L EAE I MP PPN +WR+ L C+
Sbjct: 874 LVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACK 933
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 173/650 (26%), Positives = 311/650 (47%), Gaps = 55/650 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CD-SLNPVEG 58
M DRN S+N++IS + R G+ A++ F +M G P+ + +++ CD S EG
Sbjct: 208 MYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEG 267
Query: 59 A-QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
A Q+ V+K GL ++ FVGT+LL YG HG + E +FE++ ++V+W S++ +
Sbjct: 268 ARQIHGYVVKCGLM-SNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYA 326
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY-EL 176
+G ++ + ++ L + + T ++ VI D G QI G VIK+G D +
Sbjct: 327 DNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSV 386
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VANSL++M+ + A ++F +++ RD +SWN+II A A + F ++L + M
Sbjct: 387 SVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRT 446
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ T ++ +C Q+ G+ +H + K+ LE +V V ++L+ YA+ + E A
Sbjct: 447 HPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDA 506
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
L F + ++++SWN+++ + + +I LL+E+L+ N TF+ L +
Sbjct: 507 ELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNL 566
Query: 356 QLLQL-HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+ L++ H +I + + +L+T Y K GL+
Sbjct: 567 EKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLM------------------------- 601
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+E K+ + D+V+WN +I A + D ++ F MR + + T
Sbjct: 602 -------DEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITI 654
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISS----DTFVCNMLIDMYGKCGSIGSSVKIF 530
V+LL C L HG+ I+ + DT+V + LI MY +CG + +S IF
Sbjct: 655 VNLLGTCMSPDYLL----KHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIF 710
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + ++N TW A+ SA G + AL+ M G D+ + L + ++
Sbjct: 711 DVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLD 770
Query: 591 EGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAEKIITTMPFP 638
EG +L + + + E+D Y + +D+ YG E + + +P P
Sbjct: 771 EGQQLHSWIIK---LGFELDEYVLNATMDM---YGKCGEIDDVFRILPIP 814
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/503 (26%), Positives = 229/503 (45%), Gaps = 35/503 (6%)
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
G S + G+ +H L +K+ N+LVNMY + I A+ +F + R+ S
Sbjct: 156 GFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDAS 215
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILG-KSIHAKV 268
WN +I + KA++ + M + V P+ ++ +C G + IH V
Sbjct: 216 WNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYV 275
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
+K L +VFVG++L+ FY ++ A+ F EI NIVSW +L++ YA +
Sbjct: 276 VKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVL 335
Query: 329 -LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
+ L G T + V+R+ F MGY+ +LG ++ KSG
Sbjct: 336 NIYRHLRHNGLICTGNTMATVIRTCGMFG-------DKTMGYQ----ILGDVI----KSG 380
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
L + +++ AN + ++ E ++ + ++ D +SWN +I A A
Sbjct: 381 LDTSSVSV------------ANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASA 428
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
HNG ++E L F +MR D T +LL AC +L G LHGLI K+ + S+
Sbjct: 429 HNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSG-LESNV 487
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
VCN L+ MY + GS + +F+ M R++I+W +++++ +G A+ EM
Sbjct: 488 CVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKT 547
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
+ V L+AC + E +++ + V + + +V + ++G + E
Sbjct: 548 RKAMNYVTFTTALSACYN----LEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDE 603
Query: 628 AEKIITTMPFPPNALIWRTFLEG 650
A+K+ MP + + W + G
Sbjct: 604 AQKVCKIMP-ERDVVTWNALIGG 625
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQA 63
R+ S+N +ISA +R G+ A F M++ G +P TF LLS S G +
Sbjct: 817 RSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACS----HGGLVDE 872
Query: 64 SVLKNGLFCADAFVGTA------LLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIF 116
++ ++ V TA ++ L GR G L E + MP + W S+++
Sbjct: 873 GLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAAC 932
Query: 117 GKHGFVE 123
HG +E
Sbjct: 933 KVHGNLE 939
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/576 (29%), Positives = 301/576 (52%), Gaps = 41/576 (7%)
Query: 85 YGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
Y + +D +F+ M +++ +W +++ ++G D FCE+ + + ++
Sbjct: 115 YSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAY 174
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
G++ +E G +H ++ GF V+ +L+NMY + I + K+F +
Sbjct: 175 SGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTE 234
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+VVSWN +I ++ + A +L+LRM + V P+ TF+ V + L++ K +
Sbjct: 235 VNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE--ISNKNIVSWNALILGY-ASK 321
++ ++ + VG+AL+D +KC +L+ A F+ I+ + WNA+I GY S
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSG 354
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYE-NYEYVL 376
+ ++ L ++ Q + +T+ V + A + L L H I+ G E NY +
Sbjct: 355 FNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSIS 414
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
++ +YAK G + D + ++NR +E D+
Sbjct: 415 NAVANAYAKCGSLED-------------------VRKVFNR-------------MEDRDL 442
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
+SW ++ A + ++ + +E+F MRA I P+ +TF S+L +C+ LC L G +HG+
Sbjct: 443 ISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGI 502
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
I K + D + + L+DMY KCG +G + K+FN +++ + ++WTA+I+ +G
Sbjct: 503 ICKVGL-DMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDD 561
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
AL+ FR M LG +P+ V + VL AC HGGLV EG++ F+ M ++YG+ PEM+HY C+V
Sbjct: 562 ALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIV 621
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
DLL R GHL +A + I+ MP PN ++W+T L C+
Sbjct: 622 DLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACR 657
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 164/622 (26%), Positives = 296/622 (47%), Gaps = 52/622 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M RN S+ +I+ + G D F M ++G P QF + G+L C L+ +E G
Sbjct: 131 MSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELG 190
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A ++ G F + FV TALL +Y + +++ VF M ++V+WN++++ F
Sbjct: 191 NMVHAQIVIRG-FTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTS 249
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ D LF ++ V +F+GV + +D+ +++ G ++ G D LV
Sbjct: 250 NDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLV 309
Query: 179 ANSLVNMYFQCAGIWSAEKMFKD--VEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+L++M +C + A +F + R WN +I S KALEL+ +M +
Sbjct: 310 GTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQN 369
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD-VFVGSALVDFYAKCDNLEG 295
++ + T+ V N+ A L+ LGK +HA+ IK+ LE + V + +A+ + YAKC +LE
Sbjct: 370 DIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLED 429
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
F+ + +++++SW +L+ Y+ S +I + + G PN+FTFS VL S
Sbjct: 430 VRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCAN 489
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
LL Q+H +I ++G + + + +L+ YAK G + DA
Sbjct: 490 LCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDA------------------ 531
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
K+ +++ D VSW +IA A +G + L+LF+ M + P+
Sbjct: 532 --------------KKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPN 577
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTE--IISSDTFVCNMLIDMYGKCGSIGSSVK 528
TF+ +L ACS + G L+KKT + + + C ++D+ + G + +++
Sbjct: 578 AVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYAC--IVDLLSRVGHLNDAME 635
Query: 529 IFNEM-TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-HG 586
+ M + N + W L+ A ++G + L + + L FK + A +L+
Sbjct: 636 FISRMPVEPNEMVWQTLLGACRVHGNVE--LGELAAQKILSFKAENSATYVLLSNTYIES 693
Query: 587 GLVREGMELFERMNRSYGVEPE 608
G ++G+ L M + GV+ E
Sbjct: 694 GSYKDGLSLRHVM-KEQGVKKE 714
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/524 (24%), Positives = 252/524 (48%), Gaps = 39/524 (7%)
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD--YELLVANSLVNMYFQCAG 191
+++ L V ++ + + L+ + +HG ++K+ F + L++ N + + Y +C+
Sbjct: 61 KTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSD 120
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
I +A ++F + R+ SW +I LAE+ F E + M +FP+Q + ++
Sbjct: 121 IDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQI 180
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
C GL + LG +HA+++ FV +AL++ YAK +E ++ F+ ++ N+VSW
Sbjct: 181 CIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSW 240
Query: 312 NALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIR 366
NA+I G+ S F L + ++ G P+ TF V ++ + + ++ +
Sbjct: 241 NAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALE 300
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
+G ++ V +L+ +K G + +A R++ ++ I +N
Sbjct: 301 LGVDSNTLVGTALIDMNSKCGSLQEA----------RSIFNSHFITCRFN---------- 340
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
WN +I+ +G ++ LELF M IY D+YT+ S+ +A + L
Sbjct: 341 ----------APWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKC 390
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L+LG +H K+ + + + N + + Y KCGS+ K+FN M DR++I+WT+L++
Sbjct: 391 LSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVT 450
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
A +A+E F M G P++ +VL +C + L+ G ++ + + G++
Sbjct: 451 AYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICK-VGLD 509
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ +VD+ + G L +A+K+ + + + W + G
Sbjct: 510 MDKCIESALVDMYAKCGCLGDAKKVFNRIS-NADTVSWTAIIAG 552
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/546 (31%), Positives = 283/546 (51%), Gaps = 39/546 (7%)
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
VS+ K G +++ + + ++ + F G++ + + LE G ++H ++K+G
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ N+L++MY +C + A ++F + R++VSW +I A +A + Y
Sbjct: 79 QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M + P++ TFV ++N+ + LG+ +H ++++ LE + VG++LV YAKC +
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGD 198
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRS 351
+ A + F + KN+V+W LI GYA + L+E +Q PN+ TF+ +L+
Sbjct: 199 ISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQG 258
Query: 352 SLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
L+ +H II+ GY +V+ SL+T Y K G + +A
Sbjct: 259 CTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEAR-------------- 304
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
KL S L D+V+W ++ A G + E + LF+ M+ I
Sbjct: 305 ------------------KLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGI 346
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD TF S+L++CS L G +H + + D ++ + L+ MY KCGS+ +
Sbjct: 347 KPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGY-NLDVYLQSALVSMYAKCGSMDDAS 405
Query: 528 KIFNEMTDRNVITWTALISAL-GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
+FN+M++RNV+ WTA+I+ +G + ALE F +M+ G KPD+V +VL+AC H
Sbjct: 406 LVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHV 465
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
GLV EG + F M YG++P ++HY C VDLL R GHL+EAE +I +MPF P +W
Sbjct: 466 GLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGA 525
Query: 647 FLEGCQ 652
L C+
Sbjct: 526 LLSACR 531
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 201/352 (57%), Gaps = 7/352 (1%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP---VEGA 59
DRN+VS+ ++I A+ +A + + M G +P + TF LL+ + NP G
Sbjct: 110 DRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFT-NPELLQLGQ 168
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ +++ GL + VGT+L+G+Y + G + + +F+ +P K++VTW +++ + +
Sbjct: 169 KVHMEIVEAGLEL-EPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQ 227
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G V+ + L + ++EVA + +F ++ G + LE G+++H +I++G+ EL V
Sbjct: 228 GQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVV 287
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
NSL+ MY +C G+ A K+F D+ RDVV+W ++ A+ +A+ L+ RM +
Sbjct: 288 NSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIK 347
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P++ TF V+ SC+ GK IH +++ DV++ SALV YAKC +++ A L
Sbjct: 348 PDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLV 407
Query: 300 FSEISNKNIVSWNALILGYASKSS--PTSIFLLIELLQLGYRPNEFTFSHVL 349
F+++S +N+V+W A+I G ++ ++ ++ + G +P++ TF+ VL
Sbjct: 408 FNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVL 459
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 146/569 (25%), Positives = 267/569 (46%), Gaps = 44/569 (7%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQASVLKNGL 70
+S + G +++AL + MI +G F GLL C L +E G ++ A++LK+G+
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFC 130
+ ++ LL +Y + G L + VF+ + +++V+W +++ F + +
Sbjct: 79 Q-PNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYE 137
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
+ + + +FV +++ +N + L+ G+++H +++ G + E V SLV MY +C
Sbjct: 138 TMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCG 197
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
I A +F + ++VV+W +I A+ ALEL M V PN+ TF ++
Sbjct: 198 DISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQ 257
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
C GK +H +I++ +++V ++L+ Y KC LE A FS++ ++++V+
Sbjct: 258 GCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVT 317
Query: 311 WNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLII 365
W A++ GYA +I L + Q G +P++ TF+ VL S + LQ +H ++
Sbjct: 318 WTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLV 377
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
GY Y+ +L++ YAK G + DA + ++N+ + N
Sbjct: 378 HAGYNLDVYLQSALVSMYAKCGSMDDA-------------------SLVFNQMSERN--- 415
Query: 426 KLLSQLERPDIVSWNIVIAA-CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+V+W +I CA +G +E LE F M+ I PD TF S+LSAC+ +
Sbjct: 416 ----------VVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHV 465
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTA 543
+ G + I + +D+ G+ G + + + M W A
Sbjct: 466 GLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGA 525
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPD 572
L+SA ++ +R E+ E L PD
Sbjct: 526 LLSACRVHSDVERG-ERAAE-NVLKLDPD 552
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 205/422 (48%), Gaps = 44/422 (10%)
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
F ++ CA L++ G+ +HA ++K+ ++ + ++ + L+ YAKC +L A F I
Sbjct: 50 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIR 109
Query: 305 NKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL--- 360
++NIVSW A+I + + + F E ++L G +P++ TF +L + +LLQL
Sbjct: 110 DRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQK 169
Query: 361 -HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
H I+ G E V SL+ YAK G IS A I++R
Sbjct: 170 VHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARV-------------------IFDRLP 210
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+ N +V+W ++IA A G LEL + M+ A + P+ TF S+L
Sbjct: 211 EKN-------------VVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQ 257
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
C+ L G +H I ++ + +V N LI MY KCG + + K+F+++ R+V+
Sbjct: 258 GCTTPAALEHGKKVHRYIIQSGY-GRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVV 316
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
TWTA+++ GF A+ FR M+ G KPD++ +VLT+C ++EG + +++
Sbjct: 317 TWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQL 376
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC----QRCR 655
+ G ++ +V + + G + +A + M N + W + GC RCR
Sbjct: 377 VHA-GYNLDVYLQSALVSMYAKCGSMDDASLVFNQMS-ERNVVAWTAIITGCCAQHGRCR 434
Query: 656 IA 657
A
Sbjct: 435 EA 436
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 145/255 (56%), Gaps = 4/255 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+P++NVV++ +I+ Y++ G V+ AL + M P + TF +L C + +E G
Sbjct: 209 LPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHG 268
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ ++++G + + +V +L+ +Y + G L+E +F D+P + +VTW ++V+ + +
Sbjct: 269 KKVHRYIIQSG-YGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQ 327
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
GF ++ + LF + + + + +F V+ S+ L+ G++IH ++ G++ ++ +
Sbjct: 328 LGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYL 387
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII-GALAESENFGKALELYLRMSVDI 237
++LV+MY +C + A +F + R+VV+W II G A+ +ALE + +M
Sbjct: 388 QSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQG 447
Query: 238 VFPNQTTFVYVINSC 252
+ P++ TF V+++C
Sbjct: 448 IKPDKVTFTSVLSAC 462
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 198/665 (29%), Positives = 323/665 (48%), Gaps = 75/665 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPT----QFTFGGLLSCDSLNPV 56
MP+R+ V +N ++ AY + ++ALR F GF P GG+ S S N
Sbjct: 778 MPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRK 837
Query: 57 EGA-QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
A Q++A +K F D+ ++F WN ++
Sbjct: 838 RHAEQVKAYAMKMFPF--------------------DQGSNIF---------AWNKKLTE 868
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
F G + + F L+RS + + V ++ DL+ GEQIH LVIK+ F
Sbjct: 869 FLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPV 928
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V+NSL+NMY + +++AEK F + D++SWNT+I + A++ +A+ + +
Sbjct: 929 VPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLR 988
Query: 236 DIVFPNQTTFVYVINSCAGLQNS---ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
D + P+Q T V+ +C+ LG +H IK + D FV +AL+D Y+K
Sbjct: 989 DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGK 1048
Query: 293 LEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
++ A + ++ SWNA++ GY S S ++ + ++G +E T + +++
Sbjct: 1049 MDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKA 1108
Query: 352 SLAF----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
S Q Q+ I++G+ N +V ++ Y K G + +AL
Sbjct: 1109 SGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNAL-------------- 1154
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+L ++ RPD V+W +I+ NGD L ++ MR + +
Sbjct: 1155 ------------------ELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGV 1196
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD YTF +L+ A S L L G +H + K + S D FV L+DMY KCGS+ +
Sbjct: 1197 QPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY-SLDHFVGTSLVDMYCKCGSVQDAY 1255
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
++F +M R V+ W A++ L +G AL FR M+ G +PD+V I VL+AC H G
Sbjct: 1256 RVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSG 1315
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
L E + F+ M ++YG+ PE++HY C+VD L R G ++EAE +I +MPF +A ++R
Sbjct: 1316 LFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRAL 1375
Query: 648 LEGCQ 652
L C+
Sbjct: 1376 LGACR 1380
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 155/662 (23%), Positives = 294/662 (44%), Gaps = 74/662 (11%)
Query: 3 DRNVVSFNSIISAYSRCG-----YVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE 57
DR++V++NSI++AY++ V + R+F + GF T+ T LL L+
Sbjct: 674 DRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGF- 732
Query: 58 GAQLQASVLKNGL-----FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
+Q S +G F D FV AL+ +Y ++G + + +F+ MP + V WN +
Sbjct: 733 ---VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVM 789
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+ + ++ F ++ + F RS S+ VI G+++ D+ + H +K
Sbjct: 790 LKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNS--DVSNNRKRHAEQVKA-- 845
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
A KMF + ++ +WN + + A++ +
Sbjct: 846 ---------------------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKT 884
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ + + T V ++++ G + LG+ IHA VIK++ V V ++L++ Y+K
Sbjct: 885 LLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGV 944
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
+ A F +++SWN +I YA + +I +LL+ G +P++FT + VLR+
Sbjct: 945 VYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRA 1004
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANI 410
C G E + LGS + YA K G+I+D+ ++
Sbjct: 1005 ----------C---STGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALID---------- 1041
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+Y++ G+ +E LL D+ SWN ++ + ++ LE F M I D
Sbjct: 1042 ---LYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPID 1098
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
T + + A L NL G + K ++D +V + ++DMY KCG + +++++F
Sbjct: 1099 EITLATAIKASGCLINLKQGKQIQAYAIKLG-FNNDLWVSSGVLDMYIKCGDMPNALELF 1157
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
E++ + + WT +IS NG AL + M G +PD ++ A +
Sbjct: 1158 GEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALE 1217
Query: 591 EGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+G ++ + + ++ +DH+ +VD+ + G +++A ++ M + W L
Sbjct: 1218 QGKQIHANVVK---LDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDV-RKVVFWNAML 1273
Query: 649 EG 650
G
Sbjct: 1274 LG 1275
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 185/441 (41%), Gaps = 68/441 (15%)
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
DL+ G++ H ++ +G + + N+L+ MY +C + SA ++F RD+V+WN+I+
Sbjct: 626 DLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA 685
Query: 216 ALAE--SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS---ILGKSIHAKVIK 270
A A+ ++ LE + + F T + + S + +++H +K
Sbjct: 686 AYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLL 330
E D+FV ALV+ Y K + A L F ++ ++ V WN ++ Y S
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENS------FQ 799
Query: 331 IELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
E L+ FS RS LHC+I G+ S
Sbjct: 800 DEALRF--------FSAFHRSGFFPDFSNLHCVI---------------------GGVNS 830
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP-----DIVSWNIVIAA 445
D + N ++ E VK + P +I +WN +
Sbjct: 831 D----------------------VSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTE 868
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
H G ++ FK + + I D+ T V +LSA +L LG +H L+ K+
Sbjct: 869 FLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPV 928
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
V N L++MY K G + ++ K F + ++I+W +IS+ N A+ FR++
Sbjct: 929 -VPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLL 987
Query: 566 FLGFKPDRVALIAVLTACRHG 586
G KPD+ L +VL AC G
Sbjct: 988 RDGLKPDQFTLASVLRACSTG 1008
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 137/609 (22%), Positives = 254/609 (41%), Gaps = 80/609 (13%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + A ++ +G D ++ L+ +Y + G L VF+ + LVTWNSI++ +
Sbjct: 630 GKRAHARIVTSGDL-PDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA 688
Query: 118 K-----HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+ + V + LF L ++T + ++ ++ E +HG +K GF
Sbjct: 689 QFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGF 748
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ +L V+ +LVN+Y + + A +F + RD V WN ++ A E+ +AL +
Sbjct: 749 ELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSA 808
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSIL-GKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
FP+ + VI G+ + + + HA+ +K
Sbjct: 809 FHRSGFFPDFSNLHCVI---GGVNSDVSNNRKRHAEQVKAY------------------- 846
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLR 350
A F NI +WN + + +I LL+ + T +L
Sbjct: 847 ----AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILS 902
Query: 351 SSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+++ L Q+H L+I+ + V SLM Y+K+G++ A T +N P
Sbjct: 903 AAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEK--TFINSPEL-- 958
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
D++SWN +I++ A N E + F+ +
Sbjct: 959 ----------------------------DLISWNTMISSYAQNNLEMEAICTFRDLLRDG 990
Query: 467 IYPDNYTFVSLLSACSKLCN---LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ PD +T S+L ACS LGS +H K II +D+FV LID+Y K G +
Sbjct: 991 LKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGII-NDSFVSTALIDLYSKGGKM 1049
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ + + D ++ +W A++ + +++ALE F M +G D + L + A
Sbjct: 1050 DEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKAS 1109
Query: 584 RHGGLV--REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
G L+ ++G ++ + G ++ V+D+ ++ G + A ++ + P+
Sbjct: 1110 --GCLINLKQGKQI-QAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS-RPDE 1165
Query: 642 LIWRTFLEG 650
+ W T + G
Sbjct: 1166 VAWTTMISG 1174
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 8/172 (4%)
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
+ +L LG H I + + D ++ N LI MY KCGS+ S+ ++F++ +DR+++TW +
Sbjct: 624 MADLKLGKRAHARIVTSGDLP-DRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 544 LISALG--LNGFAQRALEKFREMEFL---GFKPDRVALIAVLTACRHGGLVREGMELFER 598
+++A + + LE FR L GF R+ L +L C G V+ E
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS-ETVHG 741
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G E ++ +V++ +YG + +A + MP +A++W L+
Sbjct: 742 YAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/576 (29%), Positives = 301/576 (52%), Gaps = 41/576 (7%)
Query: 85 YGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
Y + +D +F+ M +++ +W +++ ++G D FCE+ + + ++
Sbjct: 115 YSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAY 174
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
G++ +E G +H ++ GF V+ +L+NMY + I + K+F +
Sbjct: 175 SGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTE 234
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+VVSWN +I ++ + A +L+LRM + V P+ TF+ V + L++ K +
Sbjct: 235 VNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE--ISNKNIVSWNALILGY-ASK 321
++ ++ + VG+AL+D +KC +L+ A F+ I+ + WNA+I GY S
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSG 354
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYE-NYEYVL 376
+ ++ L ++ Q + +T+ V + A + L L H I+ G E NY +
Sbjct: 355 FNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSIS 414
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
++ +YAK G + D + ++NR +E D+
Sbjct: 415 NAVANAYAKCGSLED-------------------VRKVFNR-------------MEDRDL 442
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
+SW ++ A + ++ + +E+F MRA I P+ +TF S+L +C+ LC L G +HG+
Sbjct: 443 ISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGI 502
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
I K + D + + L+DMY KCG +G + K+FN +++ + ++WTA+I+ +G
Sbjct: 503 ICKVGL-DMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDD 561
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
AL+ FR M LG +P+ V + VL AC HGGLV EG++ F+ M ++YG+ PEM+HY C+V
Sbjct: 562 ALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIV 621
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
DLL R GHL +A + I+ MP PN ++W+T L C+
Sbjct: 622 DLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACR 657
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 164/622 (26%), Positives = 296/622 (47%), Gaps = 52/622 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M RN S+ +I+ + G D F M ++G P QF + G+L C L+ +E G
Sbjct: 131 MSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELG 190
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A ++ G F + FV TALL +Y + +++ VF M ++V+WN++++ F
Sbjct: 191 NMVHAQIVIRG-FTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTS 249
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ D LF ++ V +F+GV + +D+ +++ G ++ G D LV
Sbjct: 250 NDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLV 309
Query: 179 ANSLVNMYFQCAGIWSAEKMFKD--VEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+L++M +C + A +F + R WN +I S KALEL+ +M +
Sbjct: 310 GTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQN 369
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD-VFVGSALVDFYAKCDNLEG 295
++ + T+ V N+ A L+ LGK +HA+ IK+ LE + V + +A+ + YAKC +LE
Sbjct: 370 DIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLED 429
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
F+ + +++++SW +L+ Y+ S +I + + G PN+FTFS VL S
Sbjct: 430 VRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCAN 489
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
LL Q+H +I ++G + + + +L+ YAK G + DA
Sbjct: 490 LCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDA------------------ 531
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
K+ +++ D VSW +IA A +G + L+LF+ M + P+
Sbjct: 532 --------------KKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPN 577
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTE--IISSDTFVCNMLIDMYGKCGSIGSSVK 528
TF+ +L ACS + G L+KKT + + + C ++D+ + G + +++
Sbjct: 578 AVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYAC--IVDLLSRVGHLNDAME 635
Query: 529 IFNEM-TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-HG 586
+ M + N + W L+ A ++G + L + + L FK + A +L+
Sbjct: 636 FISRMPVEPNEMVWQTLLGACRVHGNVE--LGELAAQKILSFKAENSATYVLLSNTYIES 693
Query: 587 GLVREGMELFERMNRSYGVEPE 608
G ++G+ L M + GV+ E
Sbjct: 694 GSYKDGLSLRHLM-KEQGVKKE 714
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/524 (24%), Positives = 252/524 (48%), Gaps = 39/524 (7%)
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD--YELLVANSLVNMYFQCAG 191
+++ L V ++ + + L+ + +HG ++K+ F + L++ N + + Y +C+
Sbjct: 61 KTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSD 120
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
I +A ++F + R+ SW +I LAE+ F E + M +FP+Q + ++
Sbjct: 121 IDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQI 180
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
C GL + LG +HA+++ FV +AL++ YAK +E ++ F+ ++ N+VSW
Sbjct: 181 CIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSW 240
Query: 312 NALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIR 366
NA+I G+ S F L + ++ G P+ TF V ++ + + ++ +
Sbjct: 241 NAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALE 300
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
+G ++ V +L+ +K G + +A R++ ++ I +N
Sbjct: 301 LGVDSNTLVGTALIDMNSKCGSLQEA----------RSIFNSHFITCRFN---------- 340
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
WN +I+ +G ++ LELF M IY D+YT+ S+ +A + L
Sbjct: 341 ----------APWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKC 390
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L+LG +H K+ + + + N + + Y KCGS+ K+FN M DR++I+WT+L++
Sbjct: 391 LSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVT 450
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
A +A+E F M G P++ +VL +C + L+ G ++ + + G++
Sbjct: 451 AYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICK-VGLD 509
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ +VD+ + G L +A+K+ + + + W + G
Sbjct: 510 MDKCIESALVDMYAKCGCLGDAKKVFNRIS-NADTVSWTAIIAG 552
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 192/654 (29%), Positives = 329/654 (50%), Gaps = 44/654 (6%)
Query: 9 FNSIISAYSRCGYVEDALRMFLY-MINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQASV 65
N I++ R + +AL F + N F+ T+ L+ +C S + +G ++ +
Sbjct: 31 MNDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHI 90
Query: 66 LKNGLFCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
L + C D + +L +YG+ G L + VF+ MP ++LV++ S+++ + ++G +
Sbjct: 91 LNSN--CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAE 148
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ L+ +++++++ + +F +I + D+ G+Q+H VIK L+ N+L+
Sbjct: 149 AITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIA 208
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE-SENFGKALELYLRMSVDIVFPNQT 243
MY + + A K+F + +D++SW++II ++ F L +S + PN+
Sbjct: 209 MYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEY 268
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
F + +C+ L G IH IK L + G +L D YA+C L+ A F++I
Sbjct: 269 IFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQI 328
Query: 304 SNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLL 358
+ SWN +I G A+ + ++ + E+ G+ P+ + +L + Q +
Sbjct: 329 ERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGM 388
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
Q+H II+ G+ V SL+T Y F + L N+ N+
Sbjct: 389 QIHSFIIKCGFLADLSVCNSLLTMYT----------FCSDL-----YCCFNLFEDFRNKA 433
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
D VSWN ++ AC + E+L LFK M + PD+ T +LL
Sbjct: 434 ----------------DSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLL 477
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
C ++ +L LGS +H KT ++ + F+ N LIDMY KCGS+ + +IF+ M + +V
Sbjct: 478 RGCVEISSLKLGSQVHCYSWKTGLVL-EQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDV 536
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
++W+ LI +GF + AL FREM+ G +P+ V + VLTAC H GLV EG++L+
Sbjct: 537 VSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAI 596
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M +G+ P +H CVVDLL R GHL EAE+ I M P+ ++W+T L C+
Sbjct: 597 MQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACK 650
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 156/581 (26%), Positives = 278/581 (47%), Gaps = 52/581 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
MP+RN+VS+ S+I+ YS+ G +A+ ++L M+ P QF FG ++ + + V G
Sbjct: 125 MPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLG 184
Query: 59 AQLQASVLKNGLFCADAFVG-TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
QL A V+K L + + AL+ +Y R + + VF +P K L++W+SI++ F
Sbjct: 185 KQLHAQVIK--LESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFS 242
Query: 118 KHGFVEDCMFLFCELVRSEV-ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ GF + + E++ V E F + S+ ++G QIHGL IK
Sbjct: 243 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNA 302
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ SL +MY +C + SA ++F +E D SWN II LA + +A+ ++ M
Sbjct: 303 IAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNS 362
Query: 237 IVFPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
P+ + ++ CA + L G IH+ +IK D+ V ++L+ Y C +L
Sbjct: 363 GFIPDAISLRSLL--CAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLY 420
Query: 295 GAHLCFSEISNK-NIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSS 352
F + NK + VSWNA++ P + L +L+ + P+ T ++LR
Sbjct: 421 CCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 480
Query: 353 LAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ L Q+HC Y + G ++ + K+GLI
Sbjct: 481 VEISSLKLGSQVHC---------YSWKTGLVLEQFIKNGLID------------------ 513
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+Y + G + ++ ++ D+VSW+ +I A +G +E L LF+ M+++ I
Sbjct: 514 -----MYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIE 568
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P++ TFV +L+ACS + + G L+ +++ IS C+ ++D+ + G + + +
Sbjct: 569 PNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAER 628
Query: 529 IFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
+EM + +V+ W L+SA G AQ+A E +++
Sbjct: 629 FIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKID 669
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 188/652 (28%), Positives = 327/652 (50%), Gaps = 32/652 (4%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQ 62
DR+V N+ + + G +++A+++ +P L DS + +G ++
Sbjct: 58 DRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVD 117
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+ NG F D+ +G+ L +Y G L E VF+ + + + WN +++ K G
Sbjct: 118 NFIRGNG-FVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDF 176
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ LF +++ S V + +F V S+ + + GEQ+HG ++K+GF V NSL
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSL 236
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
V Y + + SA K+F ++ RDV+SWN+II + K L ++++M + +
Sbjct: 237 VAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDL 296
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T V V CA + LG+++H +K + + L+D Y+KC +L+ A + F E
Sbjct: 297 ATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFRE 356
Query: 303 ISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
+S +++VS+ ++I GYA + + ++ L E+ + G P+ +T + VL +LL
Sbjct: 357 MSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLD-- 414
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
G +E++ + + F + +N + +Y + G
Sbjct: 415 -----EGKRVHEWIK-------------ENDMGF--------DIFVSNALMDMYAKCGSM 448
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA-ARIYPDNYTFVSLLSA 480
E + S++ DI+SWN VI + N E L LF + R PD T +L A
Sbjct: 449 REAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPA 508
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C+ L G +HG I + S D V N L+DMY KCG++ + +F+++T +++++
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFS-DRHVANSLVDMYAKCGALLLARLLFDDITSKDLVS 567
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
WT +I+ G++GF + A+ F +M G +PD ++ +++L AC H GLV EG F M
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+EP ++HY C+VD+L R G+L +A + I MP PP+A IW L GC+
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCR 679
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 217/416 (52%), Gaps = 20/416 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
M +R+V+S+NSII+ Y G E L +F+ M+ G E T + + DS G
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +K D F T LL +Y + G LD VF +M +S+V++ S+++ + +
Sbjct: 316 RAVHCFGVKACFSREDRFCNT-LLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAR 374
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + LF E+ ++ + V++ + + L+ G+++H + +N +++ V
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFV 434
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N+L++MY +C + AE +F ++ ++D++SWNT+IG +++ +AL L+ + V+
Sbjct: 435 SNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKR 494
Query: 239 F-PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
F P++ T V+ +CA L G+ IH +++N D V ++LVD YAKC L A
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAR 554
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----RSS 352
L F +I++K++VSW +I GY +I L ++ Q G P+E +F +L S
Sbjct: 555 LLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSG 614
Query: 353 LA------FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
L F +++ C I E+Y ++ L A++G +S A F+ + IP
Sbjct: 615 LVDEGWRFFNIMRHECK-IEPTVEHYACIVDML----ARTGNLSKAYRFIENMPIP 665
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 196/663 (29%), Positives = 328/663 (49%), Gaps = 35/663 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M DR+VV +N+++ Y G E+A+ + M P T LL +C+ + + G
Sbjct: 114 MSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLG 173
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ L+NG+F ++ V TAL+G Y R + + +F+ M +++V+WN+++S +
Sbjct: 174 RGVHGYCLRNGMFDSNPHVATALIGFYLRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYD 232
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + LF +++ EV + + + + L+ G+QIH L IK F +L +
Sbjct: 233 VGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYI 292
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+NMY + S+ ++F+ V RD WN++I A A +A++L++RM + V
Sbjct: 293 LNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGV 352
Query: 239 FPNQTTFVYVINSCAGLQNSIL-GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
++ T V +++ C L + +L GKS+HA VIK+ + D +G+AL+ Y + + +E
Sbjct: 353 KKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQ 412
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQ 356
F + +I+SWN +IL A + L E ++ +PN +T +L +
Sbjct: 413 KIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVT 472
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L G + Y I TAL A +Y
Sbjct: 473 CLD----------------FGRSIHGYVMKHSIEINQPLRTAL------------ADMYM 504
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
G L D++SWN +IA+ N + L LF M + P++ T ++
Sbjct: 505 NCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRM-ISEAEPNSVTIIN 563
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEI-ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
+LS+ + L L G SLH + + + D + N I MY +CGS+ S+ IF +
Sbjct: 564 VLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPK 623
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
RN+I+W A+I+ G+NG A+ F +M GF+P+ V ++VL+AC H G + G++L
Sbjct: 624 RNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQL 683
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
F M + + V PE+ HY C+VDLL R G + EA + I +MP P+A +WR L C+
Sbjct: 684 FHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYS 743
Query: 656 IAK 658
AK
Sbjct: 744 DAK 746
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 179/652 (27%), Positives = 307/652 (47%), Gaps = 47/652 (7%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVL 66
+NS+I + + L + M + G P T +L +C + N VE G + S+
Sbjct: 21 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
L D VGTA++ Y + G +++ VF+ M + +V WN++V + G E+ M
Sbjct: 81 GTDLM-DDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAM 139
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELLVANSLVNM 185
L E+ R + + V ++ +L G +HG ++NG FD VA +L+
Sbjct: 140 LLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGF 199
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y + + +F + +R++VSWN +I + ++ KALEL+++M VD V + T
Sbjct: 200 YLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTM 258
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
+ + +CA L + LGK IH IK D+++ +AL++ Y+ +LE +H F + N
Sbjct: 259 LVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPN 318
Query: 306 KNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLR--SSLAFQLLQ--- 359
++ WN++I YA+ ++ L I + G + +E T +L LA LL+
Sbjct: 319 RDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKS 378
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
LH +I KSG+ DA N + +Y
Sbjct: 379 LHAHVI-------------------KSGMRIDASL-------------GNALLSMYTELN 406
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
K+ +++ DI+SWN +I A A N + ELF+ MR + I P++YT +S+L+
Sbjct: 407 CVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILA 466
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
AC + L G S+HG + K I + + L DMY CG ++ +F DR++I
Sbjct: 467 ACEDVTCLDFGRSIHGYVMKHS-IEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLI 525
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W A+I++ N A +AL F M +P+ V +I VL++ H + +G L +
Sbjct: 526 SWNAMIASYVKNNQAHKALLLFHRM-ISEAEPNSVTIINVLSSFTHLATLPQGQSLHAYV 584
Query: 600 N-RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
R + + ++ + + + R G L+ AE I T+P N + W + G
Sbjct: 585 TRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP-KRNIISWNAMIAG 635
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 237/492 (48%), Gaps = 37/492 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNP--VE 57
+P+R+ +NS+ISAY+ G E+A+ +F+ M + G + + T +LS C+ L ++
Sbjct: 316 VPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLK 375
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G L A V+K+G+ DA +G ALL +Y C++ V +F+ M +++WN+++
Sbjct: 376 GKSLHAHVIKSGMRI-DASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALA 434
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ LF + SE+ + + ++ + L+FG IHG V+K+ +
Sbjct: 435 RNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQP 494
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ +L +MY C +A +F+ RD++SWN +I + ++ KAL L+ RM +
Sbjct: 495 LRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRM-ISE 553
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN--ALECDVFVGSALVDFYAKCDNLEG 295
PN T + V++S L G+S+HA V + +L D+ + +A + YA+C +L+
Sbjct: 554 AEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQS 613
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLA 354
A F + +NI+SWNA+I GY + L ++L+ G+RPN TF VL +
Sbjct: 614 AENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACS- 672
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
H I MG + + + V N+ +V + I +
Sbjct: 673 ------HSGFIEMGLQLFH--------------------SMVQDFNVTPELVHYSCIVDL 706
Query: 415 YNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNY 472
R G +E + + + PD W ++++C D K+ +F+ + + + NY
Sbjct: 707 LARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNY 766
Query: 473 TFVSLLSACSKL 484
+S + A + L
Sbjct: 767 VLLSNVYATAGL 778
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 193/409 (47%), Gaps = 46/409 (11%)
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI-L 260
++I+D WN++I A +N L Y +M V PN TT V+ +CA QN++
Sbjct: 13 IQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAA-QNAVER 71
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
GKSIH + L DV VG+A+VDFY KC +E A F +S++++V WNA++ GY
Sbjct: 72 GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 131
Query: 321 KSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
LL+ E+ + RPN R+ +A L +R+G + Y L
Sbjct: 132 WGCYEEAMLLVREMGRENLRPNS-------RTMVALLLACEGASELRLGRGVHGYCL--- 181
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVS 438
++G+ TAL G Y R + LL L +IVS
Sbjct: 182 -----RNGMFDSNPHVATAL------------IGFYLRFDM--RVLPLLFDLMVVRNIVS 222
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
WN +I+ GDY + LELF M + D T + + AC++L +L LG +H L
Sbjct: 223 WNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAI 282
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
K E + D ++ N L++MY GS+ SS ++F + +R+ W ++ISA G + A+
Sbjct: 283 KFEFV-EDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAM 341
Query: 559 EKFREMEFLGFKPDRVALIAVLTACR------------HGGLVREGMEL 595
+ F M+ G K D ++ +L+ C H +++ GM +
Sbjct: 342 DLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRI 390
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 12/176 (6%)
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
++++ D WN VI A+ + + +L + M + + P+N T +L AC+ +
Sbjct: 11 TKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVE 70
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G S+H I+ T+++ D V ++D Y KCG + + +F+ M+DR+V+ W A++
Sbjct: 71 RGKSIHRSIQGTDLMD-DVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGY 129
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-----------HGGLVREGM 593
G + A+ REM +P+ ++A+L AC HG +R GM
Sbjct: 130 VGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGM 185
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 199/660 (30%), Positives = 341/660 (51%), Gaps = 43/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEP-TQFTFGGLL-SCDSLNPVE- 57
MP+RN+VS++S++S Y++ GY E AL FL + ++ ++ +C + E
Sbjct: 101 MPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEP 160
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G+Q+ + V+K+G F D +VGT+L+ LY +HG +D+ VF+ + K+ VTW +I++ +
Sbjct: 161 GSQVHSYVIKSG-FGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYT 219
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
K G E + LF ++ S V + +++ S L+ G+QIH V+++ ++
Sbjct: 220 KSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVS 279
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
N L++ Y +C + + + +F +++++++SW T+I ++ +A+EL M
Sbjct: 280 TYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMG 339
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P++ V+ SC + G+ IH+ VIK LE D FV +AL+D Y+KC+ L+ A
Sbjct: 340 WKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAK 399
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQ 356
F ++ ++V +NA+I GY+ + + + ++L + P+ TF +L S A
Sbjct: 400 RVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALL 459
Query: 357 LLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
LQL H LII+ G+ ++ +L+ Y+K I DA +
Sbjct: 460 CLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDA---------------RYVFE 504
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
G N+ DIV WN + + +E +L+ ++ +R P+ +
Sbjct: 505 GTTNK-----------------DIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEF 547
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF +L +A S L +L G H + K + SD F+ N L+DMY KCGS+ + KIF+
Sbjct: 548 TFAALTTAASILASLPHGQQFHNQVMKMGL-ESDPFITNALVDMYAKCGSVEEAEKIFSS 606
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
++ W ++IS +G + AL F M P+ V ++VL+AC H G V +G
Sbjct: 607 SVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDG 666
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++ + M R YG+EP ++HY VV LL R G L EA + I M P AL+WR+ L C+
Sbjct: 667 LQHYNSMAR-YGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACR 725
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 155/574 (27%), Positives = 275/574 (47%), Gaps = 40/574 (6%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D F+ LL Y + G + + ++F+ MP ++LV+W+S+VS++ + G+ E + F E
Sbjct: 74 DVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQ 133
Query: 134 RSEV-ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
R+ V L E +I E G Q+H VIK+GF ++ V SLV +Y + I
Sbjct: 134 RTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEI 193
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
A +F + ++ V+W II +S +L+L+ M V P++ ++N+C
Sbjct: 194 DKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNAC 253
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
+ L GK IHA V+++ + DV + L+DFY KC ++ F + KNI+SW
Sbjct: 254 SVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWT 313
Query: 313 ALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRM 367
+I GY S ++ L+ E+ ++G++P+E+ S VL S + L Q+H +I++
Sbjct: 314 TMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKV 373
Query: 368 GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
E+ +V +L+ Y+K + DA ++
Sbjct: 374 CLEHDNFVTNALIDMYSKCNALDDA--------------------------------KRV 401
Query: 428 LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNL 487
+ +V +N +I + G LE+F+ MR + P TFVSLL + L L
Sbjct: 402 FDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCL 461
Query: 488 ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISA 547
L +HGLI K S D F + LID+Y KC I + +F T+++++ W +L S
Sbjct: 462 QLSKQIHGLIIKYG-FSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSG 520
Query: 548 LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
L ++ A + + +++ +P+ A+ TA + G + ++ + G+E
Sbjct: 521 YNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMK-MGLES 579
Query: 608 EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
+ + +VD+ + G ++EAEKI ++ + A
Sbjct: 580 DPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTA 613
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 209/460 (45%), Gaps = 47/460 (10%)
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
+SN+ L + ++H V+ G Y++ ++N L++ YF+ ++ A +F + R++VSW
Sbjct: 51 VSNKSILYY-RKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSW 109
Query: 211 NTIIGALAESENFGKALELYL---RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
++++ + KAL +L R VD + N+ +I +C G +H+
Sbjct: 110 SSVVSMYTQLGYNEKALLYFLEFQRTCVDKL--NEYILASIIRACVQRDGGEPGSQVHSY 167
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTS 326
VIK+ DV+VG++LV YAK ++ A L F + K V+W A+I GY S S S
Sbjct: 168 VIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVS 227
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
+ L +++ P+++ S +L N VLG Y K
Sbjct: 228 LQLFNLMMESNVIPDKYVLSSIL---------------------NACSVLG-----YLKG 261
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
G A+V V N++ Y + G+ L +L+ +I+SW +IA
Sbjct: 262 G--KQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGY 319
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
N E +EL M PD Y S+L++C + L G +H + K + D
Sbjct: 320 MQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKV-CLEHD 378
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
FV N LIDMY KC ++ + ++F+ +T +V+ + A+I G+ ALE F+EM
Sbjct: 379 NFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRL 438
Query: 567 LGFKPDRVALIAV-----------LTACRHGGLVREGMEL 595
P + +++ L+ HG +++ G L
Sbjct: 439 KHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSL 478
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 185/632 (29%), Positives = 316/632 (50%), Gaps = 54/632 (8%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D + A+LG Y + L++ +F +MP +++V+WN+++S ++GF + + ++ +
Sbjct: 70 DIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMS 129
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
R T + V+ D+E G + HG+ IK G D + V N+L+ MY +C I
Sbjct: 130 REGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIG 189
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
A + F DV + VS+ ++G LA+S+ +A L+ M + + + + V+ C+
Sbjct: 190 DAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCS 249
Query: 254 -------GLQNS-------ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
GL +S + G+ +H IK+ E D+ + ++L+D YAK N++ A +
Sbjct: 250 RGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMI 309
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA---- 354
F + ++VSWN +I GY KS + ++ +Q G+ P+E T+ ++L + +
Sbjct: 310 FVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDI 369
Query: 355 ------FQLLQLHCL----IIRMGY---ENY--------EYVLGSLMTSYAKSGLISDAL 393
F + L I GY EN+ E S+ +I +L
Sbjct: 370 EAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSL 429
Query: 394 AFVTALNIPRAVVP-------------ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
A + L R V A+ + G+Y++ G+ ++ ++ DIV WN
Sbjct: 430 AGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWN 489
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
++A + N KE FK MR ++P +++ ++LS C+KL +L+ G +H I +
Sbjct: 490 SMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAR- 548
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
E +D FV + LIDMY KCG + ++ +F+ M +N +TW +I NG A+
Sbjct: 549 EGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLL 608
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
+ +M G KPD + +AVLTAC H GLV G+++F M + +GVEP +DHY C++D L
Sbjct: 609 YEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLG 668
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G L EAE +I MP + +IW L C+
Sbjct: 669 RAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCR 700
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 157/568 (27%), Positives = 268/568 (47%), Gaps = 98/568 (17%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+RN+VS+N++ISA +R G+ + AL ++ M GF PT FT +LS C +L VE G
Sbjct: 97 MPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASVLSACGALVDVECG 156
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +K GL + +VG ALLG+Y + C+ + + F D+P + V++ +++
Sbjct: 157 RRCHGISIKIGLD-NNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLAD 215
Query: 119 HGFVEDCMFLFCELVRSEV---ALTESSFVGVIH-------GLSNEQDL----EFGEQIH 164
V + LF ++R+ + +++ SS +GV GL + D+ G+Q+H
Sbjct: 216 SDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVH 275
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
L IK+GF+ +L + NSL++MY + + SAE +F ++ VVSWN +I +
Sbjct: 276 CLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSS 335
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSC-------AGLQ-------------NSILG--- 261
KA+E RM P++ T+V ++ +C AG Q N+IL
Sbjct: 336 KAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYS 395
Query: 262 -----------------KSIHAKVIKNALECDVFVGSALVD------------------- 285
+S+H A+ G L++
Sbjct: 396 QNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIY 455
Query: 286 -------FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLG 337
Y+KC +E A F I+ +IV WN+++ G + S F ++ + G
Sbjct: 456 LASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKG 515
Query: 338 YRPNEFTFSHVLR-----SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
P++F+++ VL SSL+ Q Q+H I R GY N +V +L+ Y+K G + DA
Sbjct: 516 MFPSQFSYATVLSCCAKLSSLS-QGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDV-DA 573
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL----ERPDIVSWNIVIAACAH 448
+V + + + V N + Y + G +E V L + E+PD +++ V+ AC+H
Sbjct: 574 ARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSH 633
Query: 449 NGDYKEVLELFKYMRAAR-IYP--DNYT 473
+G +++F M+ + P D+YT
Sbjct: 634 SGLVDTGIKIFNSMQQEHGVEPLVDHYT 661
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 135/581 (23%), Positives = 261/581 (44%), Gaps = 99/581 (17%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
G+ IH ++++ + ++N L+ Y +C I ++ ++F + RD+ +WN I+GA +
Sbjct: 24 GKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCK 83
Query: 220 SENF-------------------------------GKALELYLRMSVDIVFPNQTTFVYV 248
+ KAL +Y RMS + P T V
Sbjct: 84 ASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASV 143
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+++C L + G+ H IK L+ +++VG+AL+ YAKC + A F ++ N
Sbjct: 144 LSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNE 203
Query: 309 VSWNALILGYASKSSPTSIFLLIELLQLGYRPN-------------------EFTF---S 346
VS+ A++ G A F L L+ L R + EF +
Sbjct: 204 VSFTAMMGGLADSDQVNEAFRLFRLM-LRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSN 262
Query: 347 HVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPR-A 404
VL S + Q Q+HCL I+ G+E+ ++ SL+ YAK+G + A + FV N+P +
Sbjct: 263 DVLSSDVHGQ--QVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFV---NMPEVS 317
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLE-------------------------------- 432
VV N++ Y + Q ++ ++ L +++
Sbjct: 318 VVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFD 377
Query: 433 ---RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
P + SWN +++ + N ++KE ++LF+ M+ ++PD T +LS+ + + L
Sbjct: 378 GMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEG 437
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G +H + +K + +D ++ + LI MY KCG + + +IF+ + + +++ W ++++ L
Sbjct: 438 GRQVHAVSQKA-VFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLS 496
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
LN + A F++M G P + + VL+ C + +G ++ ++ R G +
Sbjct: 497 LNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIARE-GYMNDA 555
Query: 610 DHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++D+ + G + +A + + M N + W + G
Sbjct: 556 FVGSALIDMYSKCGDV-DAARWVFDMMLGKNTVTWNEMIHG 595
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 192/444 (43%), Gaps = 86/444 (19%)
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD----------- 291
T ++ +C + + GK IHA ++++ L D F+ + L++FYAKC+
Sbjct: 6 TYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQ 65
Query: 292 --------------------NLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLL 330
LE AH+ F+E+ +NIVSWN LI ++ +
Sbjct: 66 MPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVY 125
Query: 331 IELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKS 386
+ + G+ P FT + VL + A ++ H + I++G +N YV +L+ YAK
Sbjct: 126 YRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKC 185
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
I DA ++ + P+ VS+ ++
Sbjct: 186 RCIGDA--------------------------------IQAFGDVPEPNEVSFTAMMGGL 213
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK---------LCNLALGSSLHG-- 495
A + E LF+ M RI+ D+ + S+L CS+ N L S +HG
Sbjct: 214 ADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQ 273
Query: 496 --LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
+ SD + N L+DMY K G++ S+ IF M + +V++W +I+ G
Sbjct: 274 VHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQ 333
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
+ +A+E + M++ GF+PD + + +L AC G + G ++F+ M+ P + ++
Sbjct: 334 SSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMS-----SPSLSSWN 388
Query: 614 CVVDLLVRYGHLKEAEKIITTMPF 637
++ + + KEA K+ M F
Sbjct: 389 TILSGYSQNENHKEAVKLFREMQF 412
>gi|302796685|ref|XP_002980104.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
gi|300152331|gb|EFJ18974.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
Length = 623
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 184/623 (29%), Positives = 319/623 (51%), Gaps = 42/623 (6%)
Query: 51 DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWN 110
+S + +G ++ + ++ NGL D ++G L+ +YGR G LD+ + F + ++++ +W
Sbjct: 14 NSKSLADGRRVHSQMISNGLD-GDTYLGNLLVQMYGRCGSLDDARAAFRGIHQRNVFSWT 72
Query: 111 SIVSIFGKHGFVEDCMFL--FCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
++S+ ++G + + L F +L +E + +F+ ++ S DL G++IH V
Sbjct: 73 ILISLLVQNGEASEGLELLKFMDLEGTEA--NKITFISLLGACSVTGDLSLGKKIHERVR 130
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
G + +++ N+L+NMY C + A +F+ + RDVVSW II A A + +AL+
Sbjct: 131 AKGLETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQ 190
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
LY RM + P+ T + V+ +CA L+ + GK+IH +++ + +E DVFVG+A+V FY
Sbjct: 191 LYRRMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYG 250
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLL-IELLQLGYRPNEFTFSH 347
KC+ ++ A F I +K+IV WNA+I YA F L +E+++ RPN+ T
Sbjct: 251 KCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLIT 310
Query: 348 VLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
+L S + ++ LH GY ++ V+ +L+ YAK G + +A R
Sbjct: 311 LLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENA---------TR 361
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+ A NRT ++++WN +I A A E L+++ M
Sbjct: 362 VFIEAT------NRT---------------TNVITWNTMIVANAQEDLNLEALQIYHRMN 400
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
I + T+ ++L+ C+ + G +H T S V N LI +YG CG++
Sbjct: 401 QEGIKASDVTYGTVLAVCANFGDFTTGREVHSRSLATGCCSD--VVQNSLICLYGGCGNL 458
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
++ F + +NV++W+++++A NG RA F M G P+ V +VL AC
Sbjct: 459 EAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHAC 518
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
H GL EG F M + +EP +HY C+V+LL + G +K+A ++ MP P+A
Sbjct: 519 SHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASA 578
Query: 644 WRTFLEGCQRCRIAKYDTLNSTK 666
WR+ L C+ +Y L + +
Sbjct: 579 WRSLLGACEVHTDKEYGALAAKQ 601
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 215/463 (46%), Gaps = 40/463 (8%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
++ ++ N + L G ++H +I NG D + + N LV MY +C + A F+ +
Sbjct: 4 TYEALLKQYGNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGI 63
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
R+V SW +I L ++ + LEL M ++ N+ TF+ ++ +C+ + LGK
Sbjct: 64 HQRNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGK 123
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
IH +V LE D+ G+AL++ Y CD+L+ A L F + +++VSW +I YA
Sbjct: 124 KIHERVRAKGLETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAG 183
Query: 323 SPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLG 377
P L ++ + RP+ T VL + + + L +H I+ G E +V
Sbjct: 184 YPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGT 243
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
++++ Y K + DA ++ ++ DIV
Sbjct: 244 AVVSFYGKCEAVDDAR--------------------------------QVFDRIMDKDIV 271
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
WN +I A A N ++ L+ M ++ P++ T ++LL +CS C + GSSLH
Sbjct: 272 CWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLLDSCSSTCKMERGSSLHREA 331
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR--NVITWTALISALGLNGFAQ 555
+S T V N LI+MY KCGS+ ++ ++F E T+R NVITW +I A
Sbjct: 332 AARGYLSH-TSVVNALINMYAKCGSLENATRVFIEATNRTTNVITWNTMIVANAQEDLNL 390
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
AL+ + M G K V VL C + G G E+ R
Sbjct: 391 EALQIYHRMNQEGIKASDVTYGTVLAVCANFGDFTTGREVHSR 433
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 209/418 (50%), Gaps = 32/418 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNP-VEGAQL 61
R+VVS+ IISAY+ GY +AL+++ M P T +L +C SL VEG +
Sbjct: 167 RDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRTLVEGKTI 226
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
++ +G+ D FVGTA++ YG+ +D+ VF+ + K +V WN+++ + ++
Sbjct: 227 HERIVASGVE-TDVFVGTAVVSFYGKCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHC 285
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E L+ E+V +++ + + + ++ S+ +E G +H G+ V N+
Sbjct: 286 EEKAFALYLEMVENQMRPNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNA 345
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIR--DVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
L+NMY +C + +A ++F + R +V++WNT+I A A+ + +AL++Y RM+ + +
Sbjct: 346 LINMYAKCGSLENATRVFIEATNRTTNVITWNTMIVANAQEDLNLEALQIYHRMNQEGIK 405
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
+ T+ V+ CA + G+ +H++ + C V ++L+ Y C NLE A
Sbjct: 406 ASDVTYGTVLAVCANFGDFTTGREVHSRSLATGC-CSDVVQNSLICLYGGCGNLEAAQTA 464
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F +++KN+VSW++++ YA L + Q G PN TF+ VL +
Sbjct: 465 FESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHA------- 517
Query: 359 QLHCLIIRMGYENYEYVL---------------GSLMTSYAKSGLISDALAFVTALNI 401
C + E + Y L G ++ AKSG + A +F++A+ +
Sbjct: 518 ---CSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPV 572
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 224/485 (46%), Gaps = 37/485 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
RNV S+ +IS + G + L + +M G E + TF LL +C + G ++
Sbjct: 66 RNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKKI 125
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V GL D G ALL +Y LDE VFE M + +V+W I+S + G+
Sbjct: 126 HERVRAKGLE-TDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGY 184
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + L+ + + + + V+ ++ + L G+ IH ++ +G + ++ V +
Sbjct: 185 PLEALQLYRRMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTA 244
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
+V+ Y +C + A ++F + +D+V WN +IGA A++ KA LYL M + + PN
Sbjct: 245 VVSFYGKCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPN 304
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
T + +++SC+ G S+H + V +AL++ YAKC +LE A F
Sbjct: 305 DVTLITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFI 364
Query: 302 EISNK--NIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
E +N+ N+++WN +I+ A + L +E LQ+ +R N+ + S + + +
Sbjct: 365 EATNRTTNVITWNTMIVANAQED------LNLEALQIYHRMNQ---EGIKASDVTYGTVL 415
Query: 360 LHCLIIRMGYENY-EYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
C N+ ++ G + S + +G SD V N + +Y
Sbjct: 416 AVC-------ANFGDFTTGREVHSRSLATGCCSD--------------VVQNSLICLYGG 454
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G + ++VSW+ ++AA A NG+ LF M + P+ TF S+
Sbjct: 455 CGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSV 514
Query: 478 LSACS 482
L ACS
Sbjct: 515 LHACS 519
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T+ +LL +LA G +H + + DT++ N+L+ MYG+CGS+ + F
Sbjct: 4 TYEALLKQYGNSKSLADGRRVHSQMISNGL-DGDTYLGNLLVQMYGRCGSLDDARAAFRG 62
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ RNV +WT LIS L NG A LE + M+ G + +++ I++L AC G + G
Sbjct: 63 IHQRNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLG 122
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
++ ER+ R+ G+E ++ + ++++ L EA + M F
Sbjct: 123 KKIHERV-RAKGLETDIITGNALLNMYTTCDSLDEARLVFERMVF 166
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 190/662 (28%), Positives = 338/662 (51%), Gaps = 47/662 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFL-YMINRGFEPTQFTFGGLL-SCDS---LNP 55
M +N+V+++S++S Y+ + +AL +F+ +M + +P ++ ++ +C LNP
Sbjct: 100 MSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNP 159
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
Q+ V+K G + D +V T+L+ Y +H C+D+ +F+ + K+ TW +I++
Sbjct: 160 --ALQIHGLVVKGG-YVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAG 216
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ K G + + LF ++ V + V+ + LE G+QIH V+++G +
Sbjct: 217 YSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMD 276
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ + N ++ YF+C + K+F + ++VVSW T+I ++ AL+L++ M+
Sbjct: 277 VSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMAR 336
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
P+ V+NSC L G+ +HA IK ++ D FV + L+D YAKCD+L
Sbjct: 337 MGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTD 396
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR-PNEFTFSHVLRSSLA 354
A F+ ++ ++VS+NA+I GY+ + L ++L P F +L S +
Sbjct: 397 ARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSAS 456
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
L Q+H LII+ G E+ +L+ Y+K + DA R V
Sbjct: 457 LYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDA----------RLV----- 501
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+++ DIV W + + + +E L+L+K ++ +R+ P+
Sbjct: 502 -----------------FEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPN 544
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+TF ++++A S + +L G H + K D FV N L+DMY K GSI + K F
Sbjct: 545 EFTFAAVITAASNIASLRHGQQFHNQVIKMGF-DDDPFVANTLVDMYAKSGSIEEAHKAF 603
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
++ W ++I+ +G A++AL+ F +M G KP+ V + VL+AC H GL+
Sbjct: 604 ISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLD 663
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G + F+ M++ +G+EP ++HY C+V LL R G L EA++ I MP A++WR+ L
Sbjct: 664 LGFDHFDSMSQ-FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSA 722
Query: 651 CQ 652
C+
Sbjct: 723 CR 724
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 158/595 (26%), Positives = 289/595 (48%), Gaps = 41/595 (6%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ + ++ G D F+ LL Y + ++ +F+ M K+LVTW+S+VS++ H
Sbjct: 59 KIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHH 118
Query: 120 GFVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + LF + +RS E V+ + L QIHGLV+K G+ ++ V
Sbjct: 119 SHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYV 178
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SL++ Y + A I A +F ++++ +W TII ++ +L+L+ +M V
Sbjct: 179 CTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHV 238
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ V+++C L+ GK IH V+++ + DV + + +DFY KC ++
Sbjct: 239 CPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRK 298
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + +KN+VSW +I G S ++ L +E+ ++G+ P+ F + VL S +
Sbjct: 299 LFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVA 358
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L Q+H I++ +N ++V L+ YAK ++DA R V N++A
Sbjct: 359 LEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDA----------RKVF--NLMAA 406
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
I D+VS+N +I + E L+LF+ MR + P
Sbjct: 407 I--------------------DLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLI 446
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FVSLL + L +L L + +HGLI K +S D F + LID+Y KC +G + +F E+
Sbjct: 447 FVSLLGVSASLYHLELSNQIHGLIIKYG-VSLDEFAGSALIDVYSKCSRVGDARLVFEEI 505
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
D++++ WTA+ S + +L+ ++ ++ KP+ AV+TA + +R G
Sbjct: 506 QDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQ 565
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ ++ + G + + + +VD+ + G ++EA K + + A W + +
Sbjct: 566 QFHNQVIK-MGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTA-CWNSMI 618
>gi|302757275|ref|XP_002962061.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
gi|300170720|gb|EFJ37321.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
Length = 847
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 188/665 (28%), Positives = 341/665 (51%), Gaps = 50/665 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-GAQ 60
D +++++ ++++AY++ G+ +AL +F M +G EP +F F + +C S+ +E G
Sbjct: 169 DPDLIAWTAMMTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTV 228
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L + +L + + C D VG ALL Y + G + E S+F M K++VTW++IV+ + ++G
Sbjct: 229 LHSRLLASSVEC-DGVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNG 287
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE---QDLEFGEQIHGLVIKN-GFDYEL 176
E + LF E++ VA + +FV ++ S+ +DL G +IH ++K+ ++
Sbjct: 288 HHEPAVELFREMLLDGVAPNKVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDV 347
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+VA +LVNMY +C + A+ +F +++ R++ SWN ++ + ++ +AL + M ++
Sbjct: 348 VVATALVNMYGRCGSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLE 407
Query: 237 I--VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN--ALECDVFVGSALVDFYAKCDN 292
V P+ TFV ++C + + IH+++ ++ + + DV +GSAL+ Y C
Sbjct: 408 GEGVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRR 467
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS 351
L A ++ N++SW ++IL + + +QL G++P+ T V+++
Sbjct: 468 LADAAQVLDQMPRTNVISWTSMILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKA 527
Query: 352 SLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ L + H G+ V +L+T Y SG + A
Sbjct: 528 AANLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQAA--------------- 572
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
K L Q D+V+WN +++A NG + L F+ M
Sbjct: 573 --------------ENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQALGTFQRMLHHGR 618
Query: 468 YPDNYTFVSLLSACS-KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
+PD TFV++L+AC+ L G +H L + SD V N L+ MY +CG++ +
Sbjct: 619 HPDKTTFVNILNACAGDPSKLLQGVKIHALAAACGL-DSDIDVANTLLHMYSRCGNLSRA 677
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
K+F+ +T +NV++W+A+ +A NG A AL+ FR M G +P+ V I++L+ C H
Sbjct: 678 RKVFHALTQKNVVSWSAMAAACAHNGDADGALQAFRGMLHGGIQPNAVTFISILSGCSHT 737
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
GL+ E + M+ + ++P + HY C++DLL R G AE++ T +P P + W +
Sbjct: 738 GLMDEAVSYLYAMSSDHNLKPTVQHYACLLDLLARAGKFHRAEELATHLPNP---VAWNS 794
Query: 647 FLEGC 651
L C
Sbjct: 795 LLGAC 799
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 163/670 (24%), Positives = 325/670 (48%), Gaps = 51/670 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV---EGA 59
+NV ++ +I A++ G +A+ +F M G + +FTF +L +C +L G
Sbjct: 59 KNVFTWTILIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGK 118
Query: 60 QLQASVLKNGLFCAD---AFVGTALLGLYGRHGCLDEVVSVFEDMPRK----SLVTWNSI 112
+ + + + GL TA++ Y ++G +++ +FE M + L+ W ++
Sbjct: 119 TIHSRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAM 178
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
++ + + G + + LF ++ + +FV I S+ LE G +H ++ +
Sbjct: 179 MTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSV 238
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ + +V N+L+N Y + + + +F +++++VV+W+ I+ A A++ + A+EL+
Sbjct: 239 ECDGVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFRE 298
Query: 233 MSVDIVFPNQTTFVYVINSC--AGL-QNSILGKSIHAKVIKN-ALECDVFVGSALVDFYA 288
M +D V PN+ TFV ++ SC AGL ++ G+ IHA+++K+ A DV V +ALV+ Y
Sbjct: 299 MLLDGVAPNKVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYG 358
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYA--SKSSPTSIFLLIELLQ-LGYRPNEFTF 345
+C ++ A F E+ ++NI SWNA+++ Y+ +S F LL+ G +P+ TF
Sbjct: 359 RCGSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITF 418
Query: 346 SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+ + ++G L + IS + + V
Sbjct: 419 ---------------------VSAADACGMMGDLSRAVEIHSRISQSWP-----SNQTDV 452
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
V + + +Y + + ++L Q+ R +++SW +I AC N D + + +++ M+
Sbjct: 453 VLGSALIKMYGNCRRLADAAQVLDQMPRTNVISWTSMILACEQNEDNEAAIRVYRAMQLH 512
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
PD T V+++ A + L +L G H +S T V N L+ +YG G + +
Sbjct: 513 GHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATS-TVVGNALVTLYGTSGDLQA 571
Query: 526 SVKIFNEMTDR---NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ +F E+ + +V+TW +++SA NG +AL F+ M G PD+ + +L A
Sbjct: 572 AENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQALGTFQRMLHHGRHPDKTTFVNILNA 631
Query: 583 CR-HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
C + +G+++ + + G++ ++D + ++ + R G+L A K+ + N
Sbjct: 632 CAGDPSKLLQGVKI-HALAAACGLDSDIDVANTLLHMYSRCGNLSRARKVFHALT-QKNV 689
Query: 642 LIWRTFLEGC 651
+ W C
Sbjct: 690 VSWSAMAAAC 699
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 146/598 (24%), Positives = 288/598 (48%), Gaps = 40/598 (6%)
Query: 48 LSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV 107
L D+ N G + ++ +G + D ++ L+ +YGR + + ++VF + RK++
Sbjct: 4 LHGDAKNLDAGRAVHLQMITSG-YHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVF 62
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE--QDLEFGEQIHG 165
TW ++ +G + + LF E+ V E +F ++ SN L G+ IH
Sbjct: 63 TWTILIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHS 122
Query: 166 LVIKNGF----DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR----DVVSWNTIIGAL 217
+ + G + ++ + ++++ Y Q I A ++F+ ++++ D+++W ++ A
Sbjct: 123 RIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMMTAY 182
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
+ + +AL L+ +M + + P++ FV I++C+ + + G +H++++ +++ECD
Sbjct: 183 NQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDG 242
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQL 336
VG+AL++FYAK + + FS + KN+V+W+A++ YA ++ L E+L
Sbjct: 243 VVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLD 302
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
G PN+ TF +L S H +I+ + ++ S A +G
Sbjct: 303 GVAPNKVTFVSLLFSC-------SHAGLIK-DLARGRKIHAEILKSTAAAG--------- 345
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
VV A + +Y R G ++ + +++ +I SWN ++ + N E L
Sbjct: 346 -------DVVVATALVNMYGRCGSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEAL 398
Query: 457 ELFKYM--RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT-EIISSDTFVCNML 513
F+ M + PD TFVS AC + +L+ +H I ++ +D + + L
Sbjct: 399 RFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSAL 458
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
I MYG C + + ++ ++M NVI+WT++I A N + A+ +R M+ G KPD
Sbjct: 459 IKMYGNCRRLADAAQVLDQMPRTNVISWTSMILACEQNEDNEAAIRVYRAMQLHGHKPDP 518
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
V ++ V+ A + ++ G+E F ++G + +V L G L+ AE +
Sbjct: 519 VTMVTVIKAAANLHDLKRGIE-FHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENV 575
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 147/577 (25%), Positives = 270/577 (46%), Gaps = 66/577 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-- 57
M +NVV++++I++AY++ G+ E A+ +F M+ G P + TF LL SC ++
Sbjct: 268 MKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGVAPNKVTFVSLLFSCSHAGLIKDL 327
Query: 58 --GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G ++ A +LK+ D V TAL+ +YGR G + + +VF++M +++ +WN+++
Sbjct: 328 ARGRKIHAEILKSTAAAGDVVVATALVNMYGRCGSVSDAKTVFDEMQHRNITSWNAMLVT 387
Query: 116 FG-KHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKN--G 171
+ +E F L+ E ++ +FV DL +IH + ++
Sbjct: 388 YSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPS 447
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
++++ ++L+ MY C + A ++ + +V+SW ++I A ++E+ A+ +Y
Sbjct: 448 NQTDVVLGSALIKMYGNCRRLADAAQVLDQMPRTNVISWTSMILACEQNEDNEAAIRVYR 507
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
M + P+ T V VI + A L + G HA+ VG+ALV Y
Sbjct: 508 AMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSG 567
Query: 292 NLEGAHLCFSEI---SNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSH 347
+L+ A F E+ S +++V+WN+++ + P + +L G P++ TF +
Sbjct: 568 DLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQALGTFQRMLHHGRHPDKTTFVN 627
Query: 348 VLRS-----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
+L + S Q +++H L A GL SD
Sbjct: 628 ILNACAGDPSKLLQGVKIHALA-------------------AACGLDSD----------- 657
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
+ AN + +Y+R G + K+ L + ++VSW+ + AACAHNGD L+ F+ M
Sbjct: 658 --IDVANTLLHMYSRCGNLSRARKVFHALTQKNVVSWSAMAAACAHNGDADGALQAFRGM 715
Query: 463 RAARIYPDNYTFVSLLSACSK--LCNLALG-----SSLHGLIKKTEIISSDTFVCNMLID 515
I P+ TF+S+LS CS L + A+ SS H L + + C L+D
Sbjct: 716 LHGGIQPNAVTFISILSGCSHTGLMDEAVSYLYAMSSDHNLKPTVQ-----HYAC--LLD 768
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+ + G + ++ + N + W +L+ A ++G
Sbjct: 769 LLARAGKFHRAEELATHLP--NPVAWNSLLGACLVHG 803
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 190/653 (29%), Positives = 324/653 (49%), Gaps = 44/653 (6%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMI---NRGFEPTQFTFGGLLSCDSLNPVEGAQ-LQASV 65
NS I + + ++AL F + + N FEP+ +T +L+C + ++ A+ + V
Sbjct: 127 NSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYT-SLVLACANFRSLDYAKKIHDHV 185
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
LK+ + + ++ +YG+ G + + VF+ M ++V+W S++S + ++G D
Sbjct: 186 LKSN-YQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDA 244
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
+ ++ ++ RS + +F VI D++ G Q+H VIK+ F + L N+L++M
Sbjct: 245 IIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISM 304
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF-PNQTT 244
Y I A +F + +D++SW T+I + +AL L+ + + PN+
Sbjct: 305 YTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFI 364
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
F V ++C+ L GK +H +K L +VF G +L D YAK L A + F +I
Sbjct: 365 FGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIK 424
Query: 305 NKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLA----FQLLQ 359
N +IVSWNA+I +A +I +++ +G P+ T+ +L + + Q Q
Sbjct: 425 NPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQ 484
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+H I+++G++ V SL+T Y K + D ALN+ R +
Sbjct: 485 IHSYIVKIGFDKEITVCNSLLTMYTKCSHLHD------ALNVFRDIS------------- 525
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
++VSWN +++AC E L+K M + PD+ T +LL
Sbjct: 526 ------------RNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLG 573
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
C++L +L +G+ +H K+ +I D VCN LIDMY KCGS+ + +F+ + +++
Sbjct: 574 TCAELTSLGVGNQVHCYSIKSGLI-LDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIV 632
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W++LI G AL FR M LG +P+ V + L+AC H GLV EG L++ M
Sbjct: 633 SWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSM 692
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+G+ P +H+ C+VDLL R G L EAE I + W+T L C+
Sbjct: 693 ETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACK 745
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 150/576 (26%), Positives = 277/576 (48%), Gaps = 46/576 (7%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
++F ++ K L T + I+ + +H + E L S S++ ++ +N +
Sbjct: 115 AIFSNLS-KELPTNSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVLACANFR 173
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
L++ ++IH V+K+ + +++ N ++NMY +C + A K+F +++ +VVSW ++I
Sbjct: 174 SLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMIS 233
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+++ A+ +Y++M+ FP+Q TF VI +C + LG+ +HA VIK+
Sbjct: 234 GYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGH 293
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELL 334
+ +AL+ Y +E A F+ I K+++SW +I GY +++L +LL
Sbjct: 294 HLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLL 353
Query: 335 QLG-YRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
+ G Y+PNEF F V + + L Q+H + ++ G + SL YAK G +
Sbjct: 354 RQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFL 413
Query: 390 SDA-LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
A +AF Q++ PDIVSWN +IAA A
Sbjct: 414 PSAKMAFC---------------------------------QIKNPDIVSWNAIIAAFAD 440
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
NGD E ++ F+ M + PD+ T++SLL C L G +H I K +
Sbjct: 441 NGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIG-FDKEIT 499
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFL 567
VCN L+ MY KC + ++ +F +++ + N+++W A++SA ++EM F
Sbjct: 500 VCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFS 559
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G KPD + + +L C + G ++ +S G+ ++ + ++D+ + G LK
Sbjct: 560 GNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKS-GLILDVSVCNGLIDMYAKCGSLKH 618
Query: 628 AEKIITTMPFPPNALIWRTFLEGCQRCRIAKYDTLN 663
A + + + + W + + G +C + ++ LN
Sbjct: 619 ARDVFDSTQ-NLDIVSWSSLIVGYAQCGLG-HEALN 652
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 150/555 (27%), Positives = 266/555 (47%), Gaps = 47/555 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQ 62
NVVS+ S+IS YS+ G DA+ M++ M G P Q TFG ++ +C ++ G QL
Sbjct: 224 NVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLH 283
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
A V+K+ F AL+ +Y G ++ +VF +P K L++W ++++ + + G+
Sbjct: 284 AHVIKS-WFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYR 342
Query: 123 EDCMFLFCELVRSEV-ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ ++LF +L+R E F V S+ +LE+G+Q+HG+ +K G + S
Sbjct: 343 VEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCS 402
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L +MY + + SA+ F ++ D+VSWN II A A++ + +A++ + +M + P+
Sbjct: 403 LCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPD 462
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
T++ ++ +C G+ IH+ ++K + ++ V ++L+ Y KC +L A F
Sbjct: 463 SITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFR 522
Query: 302 EIS-NKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL- 358
+IS N N+VSWNA++ K F L + + G +P+ T + +L + L
Sbjct: 523 DISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLG 582
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
Q+HC I KSGLI D V N + +Y
Sbjct: 583 VGNQVHCYSI-------------------KSGLILD-------------VSVCNGLIDMY 610
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G + + DIVSW+ +I A G E L LF+ M + P+ T++
Sbjct: 611 AKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYL 670
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
LSACS + + G L+ ++ I + + F C ++D+ + G + + +
Sbjct: 671 GALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSC--IVDLLARAGCLHEAETFIQKS 728
Query: 534 -TDRNVITWTALISA 547
D ++ W L++A
Sbjct: 729 GLDADITAWKTLLAA 743
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 189/663 (28%), Positives = 328/663 (49%), Gaps = 73/663 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M +R+VV +N ++ Y + G ++A ++F G P +F+ +L+ +N EG
Sbjct: 788 MRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGK 847
Query: 60 ----QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
Q+QA K +S+ +D P + WN +S
Sbjct: 848 WLADQVQAYAAK---------------------------LSLSDDNP--DVFCWNKKLSE 878
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
G + F + + + + V+ ++ DLE G+Q+HG+ +K+G D +
Sbjct: 879 CLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSD 938
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ VANSLVNMY + + A ++F D++ D++SWN++I + A+S +++ L++ +
Sbjct: 939 VSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLH 998
Query: 236 DIVFPNQTTFVYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ + P+ T V+ +C+ L + + + + IH +K D FV + L+D Y+K +E
Sbjct: 999 EGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKME 1058
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSL 353
A F + ++ WNA++ GY + L L+ + G + ++ T + ++
Sbjct: 1059 EAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACG 1118
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
LL Q+H I+ G+++ +V ++ Y K G +
Sbjct: 1119 CLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDM-------------------- 1158
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ AGI + + + PD V+W +I+ C NG+ + L ++ MR +R+ P
Sbjct: 1159 VNAGI------------VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMP 1206
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D YTF +L+ A S + L G LH + K + +S D FV L+DMY KCG+I + ++
Sbjct: 1207 DEYTFATLIKASSCVTALEQGRQLHANVIKLDCVS-DPFVGTSLVDMYAKCGNIEDAYRL 1265
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F +M RN+ W A++ L +G A+ A+ F+ M+ G +PDRV+ I +L+AC H GL
Sbjct: 1266 FKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLT 1325
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
E E M YG+EPE++HY C+VD L R G ++EA+K+I TMPF +A I R L
Sbjct: 1326 SEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 1385
Query: 650 GCQ 652
C+
Sbjct: 1386 ACR 1388
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 136/493 (27%), Positives = 247/493 (50%), Gaps = 35/493 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEG- 58
M +++S+NS+IS+ ++ E+++ +F+ +++ G +P FT +L +C SL ++G
Sbjct: 965 MKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSL--IDGL 1022
Query: 59 ---AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV-- 113
Q+ LK G AD+FV T L+ +Y + G ++E +F++ L WN+++
Sbjct: 1023 NISRQIHVHALKTGNI-ADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFG 1081
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
I G G + + LF + +S + + L+ G+QIH IK GFD
Sbjct: 1082 YIIGNDG--KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFD 1139
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+L V + +++MY +C + +A +F + D V+W ++I ++ N +AL +Y RM
Sbjct: 1140 SDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRM 1199
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC--DVFVGSALVDFYAKCD 291
V P++ TF +I + + + G+ +HA VIK L+C D FVG++LVD YAKC
Sbjct: 1200 RQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIK--LDCVSDPFVGTSLVDMYAKCG 1257
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTF----- 345
N+E A+ F +++ +NI WNA+++G A ++ ++ L + G P+ +F
Sbjct: 1258 NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 1317
Query: 346 --SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA------LAFVT 397
SH +S A++ LH + G E L+ + ++GL+ +A + F
Sbjct: 1318 ACSHAGLTSEAYEY--LHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKA 1375
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
+ +I RA++ A I G TG+ L LE D ++ ++ A + +V +
Sbjct: 1376 SASINRALLGACRIQGDV-ETGK--RVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTD 1432
Query: 458 LFKYMRAARIYPD 470
K M+ + D
Sbjct: 1433 ARKMMKRKNVKKD 1445
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 137/553 (24%), Positives = 246/553 (44%), Gaps = 60/553 (10%)
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+L G+ H ++ +G + ++N+L+ MY +C + SA ++F RD+V+WN I+
Sbjct: 635 HNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAIL 694
Query: 215 GALAES--ENFGKA---LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
GA A S N G A L L+ + + + T V+ C + +H I
Sbjct: 695 GAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAI 754
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF- 328
K LE DVFV ALV+ Y+KC + A L F + +++V WN ++ GY F
Sbjct: 755 KIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQ 814
Query: 329 LLIELLQLGYRPNEFTFSHVLRSS----------LAFQLLQLHCLIIRMGYENYEYV--- 375
L E + G RP+EF+ +L LA Q +Q + + + +N +
Sbjct: 815 LFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQ-VQAYAAKLSLSDDNPDVFCWN 873
Query: 376 ------------LGSLMTSYAKSGLISD-----------ALAFVTALNIPRAVVPANIIA 412
G++ +GL D A+A L + + V + +
Sbjct: 874 KKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKS 933
Query: 413 GIYNRTGQYNETVKLLSQ-------------LERPDIVSWNIVIAACAHNGDYKEVLELF 459
G+ + N V + S+ ++ D++SWN +I++CA + +E + LF
Sbjct: 934 GLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLF 993
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCN-LALGSSLHGLIKKTEIISSDTFVCNMLIDMYG 518
+ + PD++T S+L ACS L + L + +H KT I +D+FV LID+Y
Sbjct: 994 IDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNI-ADSFVATTLIDVYS 1052
Query: 519 KCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
K G + + +F D ++ W A++ + ++ALE F + G K D++ L
Sbjct: 1053 KSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLAT 1112
Query: 579 VLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFP 638
AC L+ +G ++ ++ G + ++ ++D+ ++ G + A I+
Sbjct: 1113 AAKACGCLVLLDQGKQIHAHAIKA-GFDSDLHVNSGILDMYIKCGDMVNA-GIVFNYISA 1170
Query: 639 PNALIWRTFLEGC 651
P+ + W + + GC
Sbjct: 1171 PDDVAWTSMISGC 1183
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 164/666 (24%), Positives = 296/666 (44%), Gaps = 82/666 (12%)
Query: 2 PDRNVVSFNSIISAY-----SRCGYVEDALRMFLYMINRGFEPTQFTFGGLL----SCDS 52
P+R++V++N+I+ AY S G ++ L +F + T+ T +L +
Sbjct: 683 PERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGC 742
Query: 53 LNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
L EG + +K GL D FV AL+ +Y + G + + +F+ M + +V WN +
Sbjct: 743 LWAAEG--VHGYAIKIGLEW-DVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMM 799
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+ + + G ++ LF E RS + E S +++G+S E + + G+ +
Sbjct: 800 LKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVS-EVNWDEGKWL--------- 849
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA-LAESENFGKALELYL 231
V Y A K+ + DV WN + L +N+G A+E ++
Sbjct: 850 -------ADQVQAY--------AAKLSLSDDNPDVFCWNKKLSECLWAGDNWG-AIECFV 893
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
M+ + + T + V+ + AG + LGK +H +K+ L+ DV V ++LV+ Y+K
Sbjct: 894 NMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMG 953
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLR 350
A F+++ + +++SWN++I A S S+ L I+LL G +P+ FT + VLR
Sbjct: 954 CAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLR 1013
Query: 351 --SSLAFQL---LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
SSL L Q+H + K+G I+D+ T ++
Sbjct: 1014 ACSSLIDGLNISRQIHVHAL-------------------KTGNIADSFVATTLID----- 1049
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+Y+++G+ E L + D+ WN ++ D K+ LELF + +
Sbjct: 1050 --------VYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKS 1101
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
D T + AC L L G +H K SD V + ++DMY KCG + +
Sbjct: 1102 GEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG-FDSDLHVNSGILDMYIKCGDMVN 1160
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ +FN ++ + + WT++IS NG +AL + M PD ++ A
Sbjct: 1161 AGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSC 1220
Query: 586 GGLVREGMELFERMNRSYGV-EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
+ +G +L + + V +P + +VD+ + G++++A ++ M N +W
Sbjct: 1221 VTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNV-RNIALW 1277
Query: 645 RTFLEG 650
L G
Sbjct: 1278 NAMLVG 1283
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISS---DTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
LL NL LG H I ++S D F+ N L+ MY KCGS+ S+ ++F+
Sbjct: 627 LLRTAISTHNLLLGKCTHARI----VVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTT 682
Query: 534 TDRNVITWTALISALGL-----NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG- 587
+R+++TW A++ A +G AQ L FR + R+ L VL C + G
Sbjct: 683 PERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGC 742
Query: 588 -LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
EG+ + G+E ++ +V++ + G +++A + M + ++W
Sbjct: 743 LWAAEGVHGYA---IKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR-ERDVVLWNM 798
Query: 647 FLEG 650
L+G
Sbjct: 799 MLKG 802
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 190/656 (28%), Positives = 336/656 (51%), Gaps = 36/656 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP R++V++ ++ISA++ G + AL MF M G P FT +L +C + +
Sbjct: 111 MPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFT 170
Query: 59 AQLQASVLK-NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ V+K NGL D +VG++L+ Y G LD +V +P +S V+WN++++ +
Sbjct: 171 HQVHGQVVKLNGL--DDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYA 228
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+HG M + +LV S +++ + V+ ++G+ +H VIK G + + +
Sbjct: 229 RHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNV 288
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ + LV MY +C A ++F ++ DVV + +I + +AL+L+++MS
Sbjct: 289 LNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMG 348
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN FV + + ++ L +S+HA ++K+ VG A+++ Y K ++ A
Sbjct: 349 VKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDAT 408
Query: 298 LCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
+ F I + SWN ++ + S S+ + + ++ G+ N++T+ VLR +
Sbjct: 409 VTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSL- 467
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
+ +R G + + +L KSGL +D ++ R +V +Y
Sbjct: 468 ------MNLRFGTQVHACIL--------KSGLQNDT-------DVSRMLVD------MYA 500
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
++G + + QL+ D SW ++++ A + ++V+E F+ M I P + T
Sbjct: 501 QSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAV 560
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LS CS + +L G LH K+ SS V L+DMY KCG+I + +F+E R
Sbjct: 561 SLSVCSDMASLGSGLQLHSWAIKSGWNSS--VVSGALVDMYVKCGNIADAEMLFHESETR 618
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+ + W +I +G +AL+ F++M G +PD + + VL+AC H GL+ EG + F
Sbjct: 619 DQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYF 678
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ ++ YG+ P M+HY C+VD+L + G L EAE +I MP P++ IWRT L C+
Sbjct: 679 KSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACR 734
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 150/603 (24%), Positives = 279/603 (46%), Gaps = 50/603 (8%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G +L A +L++ L D F+ +LL +Y + G L + VF+ MP + +V W +++S
Sbjct: 68 RGQELHARLLRSALH-PDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAH 126
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYE 175
G + + +F + + +A + V+ S +F Q+HG V+K NG D +
Sbjct: 127 TAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLD-D 185
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V +SLV Y C + +AE + + R VSWN ++ A ++ + + + ++
Sbjct: 186 PYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVA 245
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
++ T V+ C L + G+S+HA VIK LE D + S LV+ Y++C + E
Sbjct: 246 SGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEE 305
Query: 296 AHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----R 350
A+ F I ++V +A+I + + ++ L +++ +G +PN + F + R
Sbjct: 306 AYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASR 365
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ A +H I++ G+ + V +++ Y K G + DA
Sbjct: 366 TGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATV---------------- 409
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
T L+ + PD SWN +++A + ++ L +FK M +
Sbjct: 410 -------------TFDLIHE---PDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSAN 453
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
YT+VS+L C+ L NL G+ +H I K+ + +DT V ML+DMY + G S+ +F
Sbjct: 454 KYTYVSVLRCCTSLMNLRFGTQVHACILKSG-LQNDTDVSRMLVDMYAQSGCFTSACLVF 512
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
++ +R+ +WT ++S A++ +E FR M +P L L+ C +
Sbjct: 513 EQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLG 572
Query: 591 EGMELFERMNRSYGVEPEMDH---YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
G++L S+ ++ + +VD+ V+ G++ +AE + + + W T
Sbjct: 573 SGLQL-----HSWAIKSGWNSSVVSGALVDMYVKCGNIADAEMLFHESE-TRDQVAWNTI 626
Query: 648 LEG 650
+ G
Sbjct: 627 ICG 629
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 194/417 (46%), Gaps = 62/417 (14%)
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
+ CA + G+ +HA+++++AL D F+ +L++ Y KC L A F + +++
Sbjct: 56 ALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRD 115
Query: 308 IVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS----SLAFQLLQLHC 362
IV+W A+I + A+ S ++ + + Q G PN FT + VL++ S + Q+H
Sbjct: 116 IVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHG 175
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
++++ + YV SL+ +Y G + A
Sbjct: 176 QVVKLNGLDDPYVGSSLVEAYTSCGELDAA------------------------------ 205
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
ETV LL ER D VSWN ++ A +GDY+ V+ + + + A+ YT ++L C
Sbjct: 206 ETV-LLGLPERSD-VSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCM 263
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
+L G S+H + K + +D + + L++MY +C S + ++F + + +V+ +
Sbjct: 264 ELGLAKYGQSVHASVIKRG-LETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCS 322
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDR-----VALIAVLTA----CR--HGGLVRE 591
A+IS + A AL+ F +M +G KP+ +A +A T CR H +V+
Sbjct: 323 AMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKS 382
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
G + + + + ++++ V+ G +++A + + P+ W T L
Sbjct: 383 GFAMLKGVGDA------------ILNMYVKVGAVQDA-TVTFDLIHEPDTFSWNTIL 426
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L C+ L G LH + ++ + DTF+ + L++MY KCG + + ++F+ M R+
Sbjct: 57 LQDCAVRRTLRRGQELHARLLRSAL-HPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRD 115
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
++ WTA+ISA G + +AL+ F M G P+ L +VL AC G + ++
Sbjct: 116 IVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHG 175
Query: 598 RMNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
++ + G++ D Y +V+ G L AE ++ +P + + W L G R
Sbjct: 176 QVVKLNGLD---DPYVGSSLVEAYTSCGELDAAETVLLGLPERSD-VSWNALLNGYAR 229
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 174/557 (31%), Positives = 292/557 (52%), Gaps = 45/557 (8%)
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
L S F +++ + + ++H +IK+ F E + N L+++Y +C + A K+
Sbjct: 17 LDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKL 76
Query: 199 FKDVEIRDVVSWNTIIGALAESE-------------------------------NFGKAL 227
F + R++ SWN+II A +S F +AL
Sbjct: 77 FDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEAL 136
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
+ +M N+ +F +++CAGLQ+ LG IH+ V ++ DV++GSALVD Y
Sbjct: 137 VYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMY 196
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT--SIFLLIELLQLGYRPNEFTF 345
+KC +E A F E++ ++ VSWN+LI Y ++ P ++ + +E+++ G P+E T
Sbjct: 197 SKCGRVEYAQSVFDEMTVRSRVSWNSLITCY-EQNGPVDEALKIFVEMIKCGVEPDEVTL 255
Query: 346 SHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALN 400
+ V+ + + Q+H +++ + +LG +L+ YAK I++A +
Sbjct: 256 ASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMP 315
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
I V ++++G Y + + + S + D+++WN +IA C NG+ +E L LF+
Sbjct: 316 IRSVVSETSMVSG-YAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFR 374
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII-----SSDTFVCNMLID 515
++ ++P +YTF +LL+AC+ L +L LG H + K SD FV N LID
Sbjct: 375 LLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLID 434
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY KCGS+ + ++F M +++ ++W A+I NGF +ALE F +M G PD V
Sbjct: 435 MYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVT 494
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+I VL AC H GL+ EG F M +G+ P DHY C+VDLL R G+L+EA+ +I M
Sbjct: 495 MIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEM 554
Query: 636 PFPPNALIWRTFLEGCQ 652
P+A++W + L C+
Sbjct: 555 SMQPDAIVWGSLLAACK 571
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 135/512 (26%), Positives = 263/512 (51%), Gaps = 50/512 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP + S+NS+IS + + G ++AL F M GF +++FG LS C L ++ G
Sbjct: 111 MPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLG 170
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+Q+ + V ++ + +D ++G+AL+ +Y + G ++ SVF++M +S V+WNS+++ + +
Sbjct: 171 SQIHSLVYRSN-YLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQ 229
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELL 177
+G V++ + +F E+++ V E + V+ + ++ G+QIH V+K + F +L+
Sbjct: 230 NGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLI 289
Query: 178 VANSLVNMYFQC-------------------------AGIWSAEK------MFKDVEIRD 206
+ N+L++MY +C +G A K MF ++ ++D
Sbjct: 290 LGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKD 349
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
V++WN +I ++ +AL L+ + + V+P TF ++N+CA L + LG+ H+
Sbjct: 350 VITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHS 409
Query: 267 KVIKNAL------ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
V+K+ + DVFVG++L+D Y KC ++E F + K+ VSWNA+I+GYA
Sbjct: 410 HVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQ 469
Query: 321 KS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ-----LHCLIIRMGYENYEY 374
++ + ++L+ G P+ T VL + LL + + G +
Sbjct: 470 NGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKD 529
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNI-PRAVVPANIIAGI-YNRTGQYNE-TVKLLSQL 431
++ ++G + +A + +++ P A+V +++A +R Q E VK L ++
Sbjct: 530 HYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEV 589
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+ + + ++ A N D+K V+ + K MR
Sbjct: 590 DPENSGPYVLLSNMYAENRDWKNVVRVRKLMR 621
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 145/583 (24%), Positives = 260/583 (44%), Gaps = 116/583 (19%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
N +I Y +CG V+ A ++F M+ R F++ N
Sbjct: 58 NRLIDVYGKCGCVDVARKLFDRMLERNI----FSW-----------------------NS 90
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
+ CA + + G LD+ V +FE MP+ +WNS++S F +HG ++ + F
Sbjct: 91 IICA-----------FTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYF 139
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
++ + E SF + + QDL+ G QIH LV ++ + ++ + ++LV+MY +C
Sbjct: 140 AQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKC 199
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A+ +F ++ +R VSWN++I ++ +AL++++ M V P++ T V+
Sbjct: 200 GRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVV 259
Query: 250 NSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCDNLEGAHLC--------- 299
++CA + G+ IHA+V+K + D+ +G+AL+D YAKC+ + A +
Sbjct: 260 SACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSV 319
Query: 300 ----------------------FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL- 336
FS + K++++WNALI G +L LL+
Sbjct: 320 VSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRE 379
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
P +TF ++L + LQL H +++ G+ ++Y G SD
Sbjct: 380 SVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFR-FQY------------GEDSD- 425
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
V N + +Y + G ++ + D VSWN +I A NG
Sbjct: 426 ------------VFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFG 473
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISS 505
+ LE+F M + PD+ T + +L ACS L G ++ HGL+
Sbjct: 474 NKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMP-----LK 528
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISA 547
D + C ++D+ G+ G + + + EM+ + I W +L++A
Sbjct: 529 DHYTC--MVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAA 569
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 153/305 (50%), Gaps = 2/305 (0%)
Query: 332 ELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
+LL L P + RS A ++H II+ + + ++ L+ Y K G +
Sbjct: 13 DLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDV 72
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
A + + R + N I + ++G ++ V + ++ + D SWN +I+ +G
Sbjct: 73 ARKLFDRM-LERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGR 131
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+ E L F M + Y+F S LSAC+ L +L LGS +H L+ ++ + SD ++ +
Sbjct: 132 FDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYL-SDVYMGS 190
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
L+DMY KCG + + +F+EMT R+ ++W +LI+ NG AL+ F EM G +P
Sbjct: 191 ALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEP 250
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D V L +V++AC ++EG ++ R+ + ++ + ++D+ + + EA I
Sbjct: 251 DEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARII 310
Query: 632 ITTMP 636
MP
Sbjct: 311 FDMMP 315
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 167/403 (41%), Gaps = 74/403 (18%)
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D++F + + F ++N CA +++ +HA +IK+ + F+ + L+D Y KC ++
Sbjct: 13 DLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDV 72
Query: 296 AHLCFSEISNKNIVSWNALILGYASK---SSPTSIF------------------------ 328
A F + +NI SWN++I + IF
Sbjct: 73 ARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRF 132
Query: 329 --LLIELLQL---GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSL 379
L+ Q+ G+ NE++F L + Q L Q+H L+ R Y + Y+ +L
Sbjct: 133 DEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSAL 192
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+ Y+K G + A + + + R+ V N + Y + G +E +K+
Sbjct: 193 VDMYSKCGRVEYAQSVFDEMTV-RSRVSWNSLITCYEQNGPVDEALKI------------ 239
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
F M + PD T S++SAC+ + + G +H + K
Sbjct: 240 -------------------FVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVK 280
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+ +D + N L+DMY KC I + IF+ M R+V++ T+++S G+A+ +
Sbjct: 281 CDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVS-----GYAKASKV 335
Query: 560 KFREMEFLGFK-PDRVALIAVLTACRHGGLVREGMELFERMNR 601
K F D + A++ C G E + LF + R
Sbjct: 336 KVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKR 378
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 79/143 (55%), Gaps = 5/143 (3%)
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
L K+++ ++ D+ F LL+ C++ + S +H I K+ +S+TF+ N LID+Y
Sbjct: 6 LVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPF-ASETFIQNRLIDVY 64
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
GKCG + + K+F+ M +RN+ +W ++I A +GF A+ F +M + D+ +
Sbjct: 65 GKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMP----QVDQCSWN 120
Query: 578 AVLTACRHGGLVREGMELFERMN 600
++++ G E + F +M+
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMH 143
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 182/579 (31%), Positives = 289/579 (49%), Gaps = 50/579 (8%)
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
KHG V ++V L S F ++ + + +H +IK F E
Sbjct: 1 MAKHGLVR-------KVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSE 53
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL------------------ 217
+ + N LV++Y +C + A K+F ++ R+ SWN ++GAL
Sbjct: 54 IFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPE 113
Query: 218 -------------AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
A+ + F +AL + M + N+ +F +++CAGL + +G I
Sbjct: 114 RDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQI 173
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-S 323
H + K+ DV++GSALVD Y+KC + A F ++ +NIVSWN+LI Y +
Sbjct: 174 HGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPA 233
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRS----SLAFQLLQLHCLIIRMGYENYEYVLG-S 378
++ + + ++ G P+E T + V + S + LQ+H +++ + VLG +
Sbjct: 234 GKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNA 293
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
L+ YAK +++A + + V ++++G Y + + S + ++VS
Sbjct: 294 LVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSG-YAKASSVKAARLMFSNMMERNVVS 352
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
WN +IA NG+ +E + LF ++ I+P +YTF +LL+AC+ L +L LG H I
Sbjct: 353 WNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHIL 412
Query: 499 KTEII-----SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
K SD FV N LIDMY KCG + +F M +R+ ++W A+I NG+
Sbjct: 413 KHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGY 472
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
ALE FREM G +PD V +I VL+AC H GLV EG F+ M +G+ P DHY
Sbjct: 473 GTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYT 532
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
C+VDLL R G L EA +I TMP P+A++W + L C+
Sbjct: 533 CMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACK 571
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 157/610 (25%), Positives = 277/610 (45%), Gaps = 119/610 (19%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
N ++ Y +CG++EDA ++F +M R
Sbjct: 58 NRLVDVYGKCGFLEDARKVFDHMQQR---------------------------------- 83
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
+ F A+LG + G LDE +++F+ MP + +WN++VS F + E+ +
Sbjct: 84 ----NTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFV 139
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
++ + L E SF + + DL G QIHGL+ K+ + ++ + ++LV+MY +C
Sbjct: 140 VDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKC 199
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ SA++ F D+++R++VSWN++I ++ GKALE+++RM + P++ T V
Sbjct: 200 RVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVA 259
Query: 250 NSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKC------------------ 290
++CA L G IHA+V+K + D+ +G+ALVD YAKC
Sbjct: 260 SACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDV 319
Query: 291 -------------DNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQL 336
+++ A L FS + +N+VSWNALI GY + ++ L + L +
Sbjct: 320 VSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRE 379
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
P +TF ++L + L+L H I++ G+ + KSG SD
Sbjct: 380 SIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGF-------------WFKSGEDSD- 425
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+ N + +Y + G + + ++ D VSWN +I A NG
Sbjct: 426 ------------IFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYG 473
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKL-------CNLALGSSLHGLIKKTEIISS 505
E LE+F+ M + PD+ T + +LSACS C + HGL+
Sbjct: 474 TEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVP-----VK 528
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKF 561
D + C ++D+ G+ G + + + M + + + W +L++A ++G + E+
Sbjct: 529 DHYTC--MVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERL 586
Query: 562 REMEFLGFKP 571
E++ L P
Sbjct: 587 LEIDPLNSGP 596
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/527 (24%), Positives = 248/527 (47%), Gaps = 84/527 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+R+ S+N+++S +++ E+ALR + M + F +++FG LS C L + G
Sbjct: 111 MPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIG 170
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + K+ + D ++G+AL+ +Y + + F+DM +++V+WNS+++ + +
Sbjct: 171 VQIHGLIAKS-RYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQ 229
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELL 177
+G + +F ++ + E + V ++ + G QIH V+K + + +L+
Sbjct: 230 NGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLV 289
Query: 178 VANSLVNMYFQC-------------------------------AGIWSAEKMFKDVEIRD 206
+ N+LV+MY +C + + +A MF ++ R+
Sbjct: 290 LGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERN 349
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
VVSWN +I ++ +A+ L+L + + ++P TF ++N+CA L + LG+ H
Sbjct: 350 VVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHT 409
Query: 267 KVIKNAL------ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
++K+ + D+FVG++L+D Y KC +E L F + ++ VSWNA+I+GYA
Sbjct: 410 HILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQ 469
Query: 321 KSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
T ++ + E+L G RP+ T VL
Sbjct: 470 NGYGTEALEIFREMLVSGERPDHVTMIGVL------------------------------ 499
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPAN----IIAGIYNRTGQYNETVKLLSQLE-RP 434
++ + +GL+ + + ++ I +VP + + R G +E L+ + P
Sbjct: 500 -SACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEP 558
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYM--RAARIYPDNYTFVSLLS 479
D V W ++AAC +G+ + L KY+ R I P N LLS
Sbjct: 559 DAVVWGSLLAACKVHGN----ITLGKYVAERLLEIDPLNSGPYVLLS 601
>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
Length = 829
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 189/666 (28%), Positives = 329/666 (49%), Gaps = 43/666 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPV-EG 58
M DR+ S+N I+ Y+R G+ AL +F M G P + + +L SL + +G
Sbjct: 1 MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+V + +D V TA+L +Y R G + F+ M +++V+W+++++ + +
Sbjct: 61 EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELL 177
G D + LF + V +FV V+ ++ + + G+ IH ++ +G +++
Sbjct: 121 RGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVI 180
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ N++VNMY +C + A ++F+ +E ++ V+WNT+I A + + + +A L M +D
Sbjct: 181 LGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDG 240
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ PN+ T V VI++CA +Q+ + G+ +H V LE D V +ALV+ Y KC L A
Sbjct: 241 LRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAAR 300
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
I ++ +SW L+ YA +I ++ + G + + FTF ++L S +A
Sbjct: 301 HALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIA 360
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L L G E ++ + A+SG+ D + TAL +Y
Sbjct: 361 ALAL-------GEEIHDRL--------AESGIELDPV-LQTAL------------VDMYG 392
Query: 417 RTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G + + ++ + D+ WN ++AA KE L +F M + PD TF+
Sbjct: 393 KCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFL 452
Query: 476 SLLSACSKLCNLALGSSLH------GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
S+L AC+ L L LG H GL + + S+D + +I+MY KCGS+ +
Sbjct: 453 SILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTS-VINMYAKCGSLADAKAE 511
Query: 530 F---NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
F +V+ W+A+++A G ++ AL F M+ G KPD V+ ++ + C H
Sbjct: 512 FAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHS 571
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
GLVRE + F + +G+ P H+ C+VDLL R G ++EAE ++ P + W T
Sbjct: 572 GLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMT 631
Query: 647 FLEGCQ 652
L C+
Sbjct: 632 LLSACR 637
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 125/249 (50%), Gaps = 2/249 (0%)
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
VV A + +YNR G + + + ++VSW+ +IAA A G + LELF M
Sbjct: 77 VVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDALELFVRMDH 136
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+ + TFVS+L AC+ + +ALG S+H I ++ D + N +++MYGKCG +
Sbjct: 137 EGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVD 196
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
+ ++F M +N +TW +I+A + + A EM+ G +P+++ L++V+ AC
Sbjct: 197 LAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACA 256
Query: 585 HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
+ G + E + G+E + + +V+L + G L+ A + + + + W
Sbjct: 257 WMQSIVRGRIVHE-IVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIE-TRDKISW 314
Query: 645 RTFLEGCQR 653
T L R
Sbjct: 315 TTLLAAYAR 323
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 1/216 (0%)
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SWN+ IA A NG + LE+F+ M + PD + +++L A + L +L+ G H +
Sbjct: 8 SWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEFFHRTV 67
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
+ + SD V ++ MY +CGS+ + + F+ M RNV++W+A+I+A G A
Sbjct: 68 CEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDA 127
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
LE F M+ G K + + ++VL AC + G + ER+ + ++ + +V+
Sbjct: 128 LELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVN 187
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ + G + A ++ M NA+ W T + C R
Sbjct: 188 MYGKCGEVDLAREVFERME-AKNAVTWNTMIAACSR 222
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 200/662 (30%), Positives = 334/662 (50%), Gaps = 46/662 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M +R + S+N+++ A+ G +A+ ++ M G TF +L +C +L G
Sbjct: 105 MSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLG 164
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFED--MPRKSLVTWNSIVSIF 116
A++ +K G + FV AL+ +YG+ G L +F+ M ++ V+WNSI+S
Sbjct: 165 AEIHGVAVKCG-YGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAH 223
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G + + LF + VA +FV + G+ + ++ G IHG V+K+ ++
Sbjct: 224 VAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADV 283
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VAN+L+ MY +C + A ++F+ + RD VSWNT++ L ++E + AL + M
Sbjct: 284 YVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNS 343
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
P+Q + + +I + N + GK +HA I+N L+ ++ +G+ LVD YAKC ++
Sbjct: 344 GQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYM 403
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + K+++SW +I GYA NEF L + F+
Sbjct: 404 GHAFECMHEKDLISWTTIIAGYAQ--------------------NEFH----LEAINLFR 439
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL-----ISDALAFVTALNIPRAVVPANII 411
+Q+ G + ++GS++ A SGL I + +V ++ ++ N I
Sbjct: 440 KVQVK------GMDVDPMMIGSVLR--ACSGLKSRNFIREIHGYVFKRDLAD-IMLQNAI 490
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y G + + + DIVSW +I C HNG E LELF ++ I PD+
Sbjct: 491 VNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDS 550
Query: 472 YTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+S LSA + L +L G +HG LI+K + + + L+DMY CG++ +S K+F
Sbjct: 551 IAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGP--IASSLVDMYACCGTVENSRKMF 608
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + R++I WT++I+A G++G +A+ F++M PD + +A+L AC H GL+
Sbjct: 609 HSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMV 668
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
EG FE M Y +EP +HY C+VDLL R L+EA + MP P++ IW L
Sbjct: 669 EGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGA 728
Query: 651 CQ 652
C
Sbjct: 729 CH 730
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 144/546 (26%), Positives = 261/546 (47%), Gaps = 44/546 (8%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G QL A +LK+ L AF+ T L+ +YG+ G L + V VF++M +++ +WN+++ F
Sbjct: 64 QGQQLHALLLKSHL---SAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAF 120
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G + + L+ ++ VA+ +F V+ + G +IHG+ +K G+ +
Sbjct: 121 VSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFV 180
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDV--EIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V N+L+ MY +C + A +F + E D VSWN+II A N +AL L+ RM
Sbjct: 181 FVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQ 240
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
V N TFV + LG IH V+K+ DV+V +AL+ YAKC +E
Sbjct: 241 EVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRME 300
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL---- 349
A F + ++ VSWN L+ G ++ ++ G +P++ + +++
Sbjct: 301 DAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASG 360
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
RS + ++H IR G ++ + +L+ YAK +
Sbjct: 361 RSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCV-------------------- 400
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
G E + D++SW +IA A N + E + LF+ ++ +
Sbjct: 401 ------KYMGHAFEC------MHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDV 448
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D S+L ACS L + +HG + K ++ +D + N ++++YG+ G I + +
Sbjct: 449 DPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL--ADIMLQNAIVNVYGEVGHIDYARRA 506
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F + +++++WT++I+ NG ALE F ++ +PD +A+I+ L+A + +
Sbjct: 507 FESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSL 566
Query: 590 REGMEL 595
++G E+
Sbjct: 567 KKGKEI 572
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 205/434 (47%), Gaps = 42/434 (9%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L G+Q+H L++K+ +A LV MY +C + A K+F ++ R + SWN ++GA
Sbjct: 62 LPQGQQLHALLLKSHLS--AFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGA 119
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
S + +A+ELY M V V + TF V+ +C L S LG IH +K
Sbjct: 120 FVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEF 179
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEI--SNKNIVSWNALILGYASKSSPTSIFLLIELL 334
VFV +AL+ Y KC +L GA + F I ++ VSWN++I + ++ + L +
Sbjct: 180 VFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRM 239
Query: 335 Q-LGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
Q +G N +TF L+ ++L H +++ + YV +L+ YAK G +
Sbjct: 240 QEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRM 299
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
DA G+ E S L R D VSWN +++ N
Sbjct: 300 EDA--------------------------GRVFE-----SMLCR-DYVSWNTLLSGLVQN 327
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
Y + L F+ M+ + PD + ++L++A + NL G +H + + S+ +
Sbjct: 328 ELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNG-LDSNMQI 386
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
N L+DMY KC + F M ++++I+WT +I+ N F A+ FR+++ G
Sbjct: 387 GNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGM 446
Query: 570 KPDRVALIAVLTAC 583
D + + +VL AC
Sbjct: 447 DVDPMMIGSVLRAC 460
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 182/587 (31%), Positives = 299/587 (50%), Gaps = 38/587 (6%)
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFC 130
F D FVG++L+ LY +GC+++ +F+ MP K V WN +++ F K G + +F
Sbjct: 3 FNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFE 62
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
++ + +F V+ ++E EFG Q+HGLVI GF ++ LVAN+LV MY +
Sbjct: 63 DMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFG 122
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
+ A K+F + +VV+WN +I ++ +A L+ M V P+ TF +
Sbjct: 123 QLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLP 182
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
S + GK IH ++++ + DVF+ SAL+D Y KC ++ A F + +N +IV
Sbjct: 183 SVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVV 242
Query: 311 WNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLII 365
A+I GY + ++ + LL+ PN T + VL + L +LH I+
Sbjct: 243 CTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANIL 302
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
+ G + +V ++M YAK G + LA+
Sbjct: 303 KHGLDERRHVGSAIMDMYAKCGRLD--LAY------------------------------ 330
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
++ ++ D V WN +I C+ NG +E ++LF+ M + D + + LSAC+ L
Sbjct: 331 QIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLP 390
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
L G ++H + K S+ F + LIDMYGKCG++ + +F+ M ++N ++W ++I
Sbjct: 391 ALHHGKAIHSFMIKGA-FDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSII 449
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
+A G +G + +L F +M G +PD V + +L+AC H G V +G++ F M YG+
Sbjct: 450 AAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGI 509
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M+HY C+VDL R G L EA + I MPF P+ +W T L C+
Sbjct: 510 PARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACR 556
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 153/569 (26%), Positives = 278/569 (48%), Gaps = 49/569 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+++ V +N +++ + +CG A+++F M N +P TF +LS C S E G
Sbjct: 33 MPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEALSEFG 92
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL V+ G F D V AL+ +Y + G L + + +F MP ++VTWN +++ F +
Sbjct: 93 NQLHGLVISCG-FHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQ 151
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF+++ LF E++ + V+ +F + ++ L+ G++IHG ++++G ++ +
Sbjct: 152 NGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFL 211
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++L+++YF+C + A K+FK D+V II + ALE++ + + +
Sbjct: 212 KSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKM 271
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T V+ +CAGL LGK +HA ++K+ L+ VGSA++D YAKC L+ A+
Sbjct: 272 SPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQ 331
Query: 299 CFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + K+ V WNA+I + P +I L ++ + G + + S L +
Sbjct: 332 IFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPA 391
Query: 358 LQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L +H +I+ +++ + +L+ Y K G L++ R V
Sbjct: 392 LHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCG----------NLSVARCV-------- 433
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++ + NE VSWN +IAA +G + L LF M I PD+ T
Sbjct: 434 -FDMMREKNE-------------VSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVT 479
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFN 531
F+++LSAC + G + + I + + + C ++D++G+ G + + +
Sbjct: 480 FLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYAC--IVDLFGRAGRLNEAFETIK 537
Query: 532 EM---TDRNVITWTALISALGLNGFAQRA 557
M D V W L+ A ++G + A
Sbjct: 538 NMPFSPDDGV--WGTLLGACRVHGNVELA 564
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 192/652 (29%), Positives = 327/652 (50%), Gaps = 39/652 (5%)
Query: 7 VSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQASV 65
+ +N +I +S G + AL F M+ P ++TF ++ +C LN V ++ +
Sbjct: 143 LPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHEL 202
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
++ F D F+G++L+ LY +G + + +F+++P + + WN +++ + K+G
Sbjct: 203 ARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSA 262
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
+ F E+ S V SFV ++ + + G Q+HGLVI++GF+ + VAN+++ M
Sbjct: 263 LGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITM 322
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C ++ A K+F + D V+WN +I ++ +A+ L+ M V + TF
Sbjct: 323 YSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITF 382
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
+ S + K +H+ ++++ + DV++ SALVD Y K ++E A F + +
Sbjct: 383 ASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTL 442
Query: 306 KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QL 360
++ A+I GY + ++ L L+Q G PN T + VL + A L +L
Sbjct: 443 VDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKEL 502
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
HC I++ G EN V S+ YAKSG + A F + +
Sbjct: 503 HCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPV------------------- 543
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
D V WN++I + + NG + ++LF+ M + D+ + + LSA
Sbjct: 544 -------------KDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSA 590
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C+ L G LH + + I SDTFV + LIDMY KCG + + +F+ M +N ++
Sbjct: 591 CANYPALYYGKELHCFVVRNSFI-SDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVS 649
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W ++I+A G +G + L+ F EM G +PD V + +++AC H GLV EG+ F M
Sbjct: 650 WNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMT 709
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
YG+ M+H+ C+VDL R G L EA I +MPF P+A W + L C+
Sbjct: 710 EEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACR 761
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 153/621 (24%), Positives = 288/621 (46%), Gaps = 57/621 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+P R+ + +N +++ Y + G AL F M N +P +F LLS C + V G
Sbjct: 238 LPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAG 297
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL V+++G F +D V ++ +Y + G L + +F+ MP+ VTWN +++ + +
Sbjct: 298 IQLHGLVIRSG-FESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQ 356
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF ++ + LF +V S V L +F + + L++ +++H ++++G +++ +
Sbjct: 357 NGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYL 416
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++LV++YF+ + A K F+ + DV +I + +AL L+ + + +
Sbjct: 417 KSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGM 476
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T V+ +CA L + LGK +H ++K LE VGS++ YAK L+ A+
Sbjct: 477 VPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQ 536
Query: 299 CFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + K+ V WN +I+ ++ P +I L ++ G + + + S L + +
Sbjct: 537 FFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPA 596
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L +LHC ++R + + +V +L+ Y+K G L + R+V
Sbjct: 597 LYYGKELHCFVVRNSFISDTFVASTLIDMYSKCG----------KLALARSV-------- 638
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++ + VSWN +IAA ++G +E L+LF M A I PD+ T
Sbjct: 639 --------------FDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVT 684
Query: 474 FVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
F+ ++SAC + G + +G+ + E F C ++D+YG+ G + +
Sbjct: 685 FLVIMSACGHAGLVDEGIYYFRCMTEEYGICARME-----HFAC--MVDLYGRAGRLHEA 737
Query: 527 VKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
M + TW +L+ A L+G + L K + P+ +L+
Sbjct: 738 FDTIKSMPFTPDAGTWGSLLGACRLHGNVE--LAKLASKHLVELDPNNSGYYVLLSNVHA 795
Query: 586 GGLVREGMELFERMNRSYGVE 606
G E + + + GV+
Sbjct: 796 GAGEWESVLKVRSLMKEKGVQ 816
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 205/481 (42%), Gaps = 39/481 (8%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
QIH V+ G + L + + ++ MY C +F +++ + WN +I +
Sbjct: 96 RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
F AL + RM V P++ TF YVI +C GL N L K +H D+F+G
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYR 339
S+L+ Y + A F E+ ++ + WN ++ GY S E+ +
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275
Query: 340 PNEFTFSHVLR----SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
PN +F +L + +QLH L+IR G+E+ V
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTV-------------------- 315
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
AN I +Y++ G + K+ + + D V+WN +IA NG E
Sbjct: 316 ------------ANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEA 363
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
+ LFK M + + D+ TF S L + K +L +H I + + D ++ + L+D
Sbjct: 364 VALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVR-HGVPFDVYLKSALVD 422
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
+Y K G + + K F + T +V TA+IS LNG AL FR + G P+ +
Sbjct: 423 IYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLT 482
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+ +VL AC ++ G EL + + G+E + + + G L A + M
Sbjct: 483 MASVLPACAALASLKLGKELHCDILKK-GLENVCQVGSSITYMYAKSGRLDLAYQFFRRM 541
Query: 636 P 636
P
Sbjct: 542 P 542
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 113/238 (47%), Gaps = 3/238 (1%)
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
G+Y + + L +L+ + WN +I + G + L F M + + PD Y
Sbjct: 119 GMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKY 178
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF ++ AC L N+ L +H L + D F+ + LI +Y G I + +F+E
Sbjct: 179 TFPYVIKACGGLNNVPLCKMVHELARSMGF-HMDLFIGSSLIKLYTDNGYIHDAKYLFDE 237
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ R+ I W +++ NG AL F+EM KP+ V+ + +L+ C G+VR G
Sbjct: 238 LPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAG 297
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++L + RS G E + + ++ + + G+L +A KI MP + + W + G
Sbjct: 298 IQLHGLVIRS-GFESDPTVANTIITMYSKCGNLFDARKIFDIMP-QTDTVTWNGLIAG 353
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 196/668 (29%), Positives = 327/668 (48%), Gaps = 70/668 (10%)
Query: 47 LLSC-DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS 105
L +C D + G + A +L++ L D F+ L+ Y + +D +F+ MP++
Sbjct: 12 LQTCIDKKAHLAGKLIHAHMLRSRL-SDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRD 70
Query: 106 LVTWNSIVSIFGKHGFVEDCMFLFCELVRSEV--------ALTESSFVGVIHGLSNEQDL 157
+ TWN+I+ + K +ED LF E+ + ALT + G + D+
Sbjct: 71 IYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGAL------VDV 124
Query: 158 EFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL 217
E G + HG+ IK G D + V N+L+ MY +C I A + F DV + VS+ ++G L
Sbjct: 125 ECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGL 184
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA-------GLQNS-------ILGKS 263
A+S+ +A L+ M + + + + V+ C+ GL +S + G+
Sbjct: 185 ADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQ 244
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS 323
+H IK+ E D+ + ++L+D YAK N++ A + F + ++VSWN +I GY KS
Sbjct: 245 VHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQ 304
Query: 324 PTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA----------FQLLQLHCL----IIRMG 368
+ ++ +Q G+ P+E T+ ++L + + F + L I G
Sbjct: 305 SSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSG 364
Query: 369 Y---ENY--------EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP---------- 407
Y EN+ E S+ +I +LA + L R V
Sbjct: 365 YSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTD 424
Query: 408 ---ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
A+ + G+Y++ G+ ++ ++ DIV WN ++A + N KE FK MR
Sbjct: 425 IYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMRE 484
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
++P +++ ++LS C+KL +L+ G +H I + E +D FV + LIDMY KCG +
Sbjct: 485 KGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAR-EGYMNDAFVGSALIDMYSKCGDVD 543
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
++ +F+ M +N +TW +I NG A+ + +M G KPD + +AVLTAC
Sbjct: 544 AARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACS 603
Query: 585 HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
H GLV G+++F M + +GVEP +DHY C++D L R G L EAE +I MP + +IW
Sbjct: 604 HSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIW 663
Query: 645 RTFLEGCQ 652
L C+
Sbjct: 664 EVLLSSCR 671
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/507 (25%), Positives = 242/507 (47%), Gaps = 73/507 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL------------ 48
+P+ N VSF +++ + V +A R+F M+ + +L
Sbjct: 169 VPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFG 228
Query: 49 ---SCDSLNP-VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK 104
S D L+ V G Q+ +K+G F +D + +LL +Y ++G +D +F +MP
Sbjct: 229 LHDSNDVLSSDVHGQQVHCLTIKHG-FESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEV 287
Query: 105 SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIH 164
S+V+WN +++ +G+ ++SS + +E+ +++
Sbjct: 288 SVVSWNVMIAGYGQK--------------------SQSS-----------KAIEYLQRMQ 316
Query: 165 GLVIKNGFDYELLVANSLVNMYFQC---AGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
+GF+ + + + VNM C I + +MF + + SWNTI+ +++E
Sbjct: 317 ----YHGFEPDEI---TYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNE 369
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
N +A++L+ M V P++TT +++S AG+ G+ +HA K D+++ S
Sbjct: 370 NHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLAS 429
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRP 340
L+ Y+KC +E A F I+ +IV WN+++ G + S F ++ + G P
Sbjct: 430 GLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFP 489
Query: 341 NEFTFSHVLR-----SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
++F+++ VL SSL+ Q Q+H I R GY N +V +L+ Y+K G + DA +
Sbjct: 490 SQFSYATVLSCCAKLSSLS-QGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDV-DAARW 547
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL----ERPDIVSWNIVIAACAHNGD 451
V + + + V N + Y + G +E V L + E+PD +++ V+ AC+H+G
Sbjct: 548 VFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGL 607
Query: 452 YKEVLELFKYMRAAR-IYP--DNYTFV 475
+++F M+ + P D+YT +
Sbjct: 608 VDTGIKIFNSMQQEHGVEPLVDHYTCI 634
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 186/415 (44%), Gaps = 57/415 (13%)
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T ++ +C + + GK IHA ++++ L D F+ + L++FYAKC+ ++ + F +
Sbjct: 6 TYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQ 65
Query: 303 ISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
+ ++I +WNA++ Y S + L E+ + S + R+ L+ +
Sbjct: 66 MPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVE 125
Query: 362 C------LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
C + I++G +N YV +L+ YAK I DA
Sbjct: 126 CGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDA----------------------- 162
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
++ + P+ VS+ ++ A + E LF+ M RI+ D+ +
Sbjct: 163 ---------IQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLS 213
Query: 476 SLLSACSK---------LCNLALGSSLHG----LIKKTEIISSDTFVCNMLIDMYGKCGS 522
S+L CS+ N L S +HG + SD + N L+DMY K G+
Sbjct: 214 SVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGN 273
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ S+ IF M + +V++W +I+ G + +A+E + M++ GF+PD + + +L A
Sbjct: 274 MDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVA 333
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
C G + G ++F+ M+ P + ++ ++ + + KEA K+ M F
Sbjct: 334 CIKSGDIEAGRQMFDGMS-----SPSLSSWNTILSGYSQNENHKEAVKLFREMQF 383
>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic-like [Glycine max]
Length = 903
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 189/661 (28%), Positives = 339/661 (51%), Gaps = 45/661 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
MP R+VVS+ +++SA++R + +AL++F M+ G P +FT L SC +L E G
Sbjct: 77 MPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFG 136
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
A++ ASV+K GL + +GT L+ LY + C E + + +V+W +++S +
Sbjct: 137 AKIHASVVKLGLE-LNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVE 195
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL--EFGEQIHGLVIKNGFDYEL 176
+ + L+ +++ + + E +FV ++ G+ + L +G+ +H +I G + L
Sbjct: 196 TSKWSEALQLYVKMIEAGIYPNEFTFVKLL-GMPSFLGLGKGYGKVLHSQLITFGVEMNL 254
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++ +++ MY +C + A K+ + DV W +II ++ +A+ + M +
Sbjct: 255 MLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELS 314
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ PN T+ ++N+ + + + LG+ H++VI LE D++VG+ALVD Y KC +
Sbjct: 315 GILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTN 374
Query: 297 HL-CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----R 350
+ F I+ N++SW +LI G+A S+ L E+ G +PN FT S +L +
Sbjct: 375 GVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSK 434
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
Q +LH II+ + V +L+ +YA G+ +A + + +N
Sbjct: 435 MKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMN---------- 484
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
DI+++ + A GD++ L + +M + D
Sbjct: 485 ----------------------HRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMD 522
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
++ S +SA + L + G LH K+ ++ V N L+ Y KCGS+ + ++F
Sbjct: 523 EFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNS-VSNSLVHSYSKCGSMRDAYRVF 581
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
++T+ + ++W LIS L NG AL F +M G KPD V ++++ AC G L+
Sbjct: 582 KDITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLN 641
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+G++ F M ++Y + P++DHY C+VDLL R G L+EA +I TMPF P+++I++T L
Sbjct: 642 QGLDYFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNA 701
Query: 651 C 651
C
Sbjct: 702 C 702
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 166/636 (26%), Positives = 303/636 (47%), Gaps = 62/636 (9%)
Query: 33 INRGFEPTQF--TFGGLLS-CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
++ F P +F T +LS C+S EGA + + ++K GL D ++ LL LY +
Sbjct: 7 VSNSFSPCRFRETCLQVLSLCNSQTLKEGACVHSPIIKVGLQ-HDLYLSNNLLCLYAKCF 65
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH 149
+ + +F++MP + +V+W +++S ++ + + LF ++ S E + +
Sbjct: 66 GVGQARHLFDEMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALR 125
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
S + EFG +IH V+K G + ++ +LV++Y +C K+ V+ DVVS
Sbjct: 126 SCSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVS 185
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN--SCAGLQNSILGKSIHAK 267
W T+I +L E+ + +AL+LY++M ++PN+ TFV ++ S GL GK +H++
Sbjct: 186 WTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKG-YGKVLHSQ 244
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTS 326
+I +E ++ + +A++ YAKC +E A + ++ W ++I G+ S +
Sbjct: 245 LITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREA 304
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSS---LAFQL-LQLHCLIIRMGYENYEYVLGSLMTS 382
+ L+++ G PN FT++ +L +S L+ +L Q H +I +G E YV +L+
Sbjct: 305 VNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDM 364
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
Y K + + R + N+I SW +
Sbjct: 365 YMKCSHTT-----TNGVKAFRGIALPNVI--------------------------SWTSL 393
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
IA A +G +E ++LF M+AA + P+++T ++L ACSK+ ++ LHG I KT+
Sbjct: 394 IAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQ- 452
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
+ D V N L+D Y G + + M R++IT+T L + L G + AL
Sbjct: 453 VDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVIT 512
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMEL--------FERMNRSYGVEPEMDHYHC 614
M K D +L + ++A G++ G +L FER N V + H +
Sbjct: 513 HMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCN---SVSNSLVHSYS 569
Query: 615 VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ G +++A ++ + P+ + W + G
Sbjct: 570 ------KCGSMRDAYRVFKDIT-EPDRVSWNGLISG 598
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 183/550 (33%), Positives = 288/550 (52%), Gaps = 9/550 (1%)
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
++S++ F G + +F +L+ +F V+ + L G Q+HG ++
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
K GF+ ++ V NSL++ Y +C I ++F + R+VVSW ++IG A+ + +A+
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVS 226
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
L+ M + PN T V VI++CA LQ+ LG+ + + + LE + + +ALVD Y
Sbjct: 227 LFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYM 286
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSH 347
KC ++ A F E +KN+V +N ++ Y + + +L E+L+ G RP+ T
Sbjct: 287 KCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLS 346
Query: 348 VLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL-AFVTALNIP 402
+ + + H ++R G E ++ V +++ Y K G A F LN
Sbjct: 347 AVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKT 406
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
R V ++IAG + R G K+ S + D+VSWN +I A +KE +ELF+ M
Sbjct: 407 R-VSWNSLIAG-FVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVM 464
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
++ I D T V + SAC L L L +HG IKK +I D + L+DM+ +CG
Sbjct: 465 QSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDI-HFDMHLGTALVDMFARCGD 523
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
S++++FN+M R+V WTA I A+ + G A+E F EM G KPD V +A+LTA
Sbjct: 524 PQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTA 583
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
HGGLV +G +F M YG+ P+ HY C+VDLL R G L EA +I +M PN +
Sbjct: 584 LSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDV 643
Query: 643 IWRTFLEGCQ 652
IW + L C+
Sbjct: 644 IWGSLLAACR 653
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 146/588 (24%), Positives = 277/588 (47%), Gaps = 26/588 (4%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVL 66
F+S+I +S CG A+ +F ++ G P FTF +LS S EG Q+ +++
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K G F D FV +L+ YG G +D + VF+ M +++V+W S++ + K G ++ +
Sbjct: 167 KMG-FERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAV 225
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
LF E+V + + VGVI + QDL+ GEQ+ + + + L+ N+LV+MY
Sbjct: 226 SLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMY 285
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+C I A K+F + +++V +NTI+ + L + M P++ T +
Sbjct: 286 MKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITML 345
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
+++C+ L + GK H V++N LE V +A+++ Y KC E A F + NK
Sbjct: 346 SAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNK 405
Query: 307 NIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFS------HVLRSSLAFQLLQL 360
VSWN+LI G+ S + + + P+ S +++ S+ + ++L
Sbjct: 406 TRVSWNSLIAGFVRNGDMESAWKIFSAM-----PDSDLVSWNTMIGALVQESMFKEAIEL 460
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL---AFVTALNIPRAVVPANIIAGIYNR 417
++ G + + + ++ G + A ++ +I + + ++ R
Sbjct: 461 FRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFAR 520
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G +++ +++ + D+ +W I A A G+ +ELF M I PD FV+L
Sbjct: 521 CGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVAL 580
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DR 536
L+A S + G + +K I+ ++D+ G+ G + ++ + N M +
Sbjct: 581 LTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEP 640
Query: 537 NVITWTALISALGLN---GFAQRALEKFREMEFLGFKPDRVALIAVLT 581
N + W +L++A ++ A A E+ E++ P+R + +L+
Sbjct: 641 NDVIWGSLLAACRVHKNVDIAAYAAERISELD-----PERTGIHVLLS 683
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 223/452 (49%), Gaps = 39/452 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M +RNVVS+ S+I Y++ G ++A+ +F M+ G P T G++S C L ++
Sbjct: 200 MSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLG 259
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + + +A + AL+ +Y + G +D+ +F++ K+LV +N+I+S + +
Sbjct: 260 EQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQ 319
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + + + E+++ + + + S D+ G+ HG V++NG + V
Sbjct: 320 GLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVC 379
Query: 180 NSLVNMYFQC-------------------------------AGIWSAEKMFKDVEIRDVV 208
N+++NMY +C + SA K+F + D+V
Sbjct: 380 NAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLV 439
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SWNT+IGAL + F +A+EL+ M + + ++ T V V ++C L L K IH +
Sbjct: 440 SWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYI 499
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SI 327
K + D+ +G+ALVD +A+C + + A F+++ +++ +W A I A + + T +I
Sbjct: 500 KKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAI 559
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV-----LGSLMTS 382
L E+LQ G +P+ F +L + L++ I R + Y G ++
Sbjct: 560 ELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDL 619
Query: 383 YAKSGLISDALAFVTALNI-PRAVVPANIIAG 413
++GL+S+AL+ + ++ + P V+ +++A
Sbjct: 620 LGRAGLLSEALSLINSMQMEPNDVIWGSLLAA 651
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 228/518 (44%), Gaps = 76/518 (14%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM-FKDVEIRDVVSWNTIIGA--L 217
+Q+H + KNG ++ L SL N+ C + + E + + + + N I+G +
Sbjct: 50 KQLHSQITKNGLNHHPL---SLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYM 106
Query: 218 AESENFG--------KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
S G KA+ ++ ++ P+ TF +V+++C G +H ++
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIF 328
K E D+FV ++L+ FY +C ++ F ++S +N+VSW +LI GYA + ++
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVS 226
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
L E++++G RPN T V+ + Q LQL E +G L
Sbjct: 227 LFFEMVEVGIRPNSVTMVGVISACAKLQDLQLG--------EQVCTCIGELELE------ 272
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
V AL + N + +Y + G ++ K+ + ++V +N +++
Sbjct: 273 -------VNALMV-------NALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVR 318
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
G +EVL + M PD T +S +SACS+L +++ G HG + + + D
Sbjct: 319 QGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDN- 377
Query: 509 VCNMLIDMYGKCGS-------------------------------IGSSVKIFNEMTDRN 537
VCN +I+MY KCG + S+ KIF+ M D +
Sbjct: 378 VCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSD 437
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+++W +I AL + A+E FR M+ G D+V ++ V +AC + G + +
Sbjct: 438 LVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHG 497
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+ + + +M +VD+ R G + A ++ M
Sbjct: 498 YIKKK-DIHFDMHLGTALVDMFARCGDPQSAMQVFNKM 534
>gi|302787038|ref|XP_002975289.1| hypothetical protein SELMODRAFT_10002 [Selaginella moellendorffii]
gi|300156863|gb|EFJ23490.1| hypothetical protein SELMODRAFT_10002 [Selaginella moellendorffii]
Length = 730
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 193/670 (28%), Positives = 329/670 (49%), Gaps = 31/670 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
+ ++NV S++ II YSR +A+ +F M R P TF L +C S +E G
Sbjct: 42 IAEKNVFSWSIIIGLYSRHRLSREAIELFHAMDVR---PNCVTFINTLGACSSAEFLETG 98
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ A ++ G + + +L+ +Y G L + F+ M R+++V+WN I++ F
Sbjct: 99 KKIHAQIVA-GEVELELNLANSLISMYSNCGSLVDAKRFFDGMNRRNVVSWNCIIAAFSG 157
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG + + LF E+ + SFV V S +DL G +IH ++ +
Sbjct: 158 HGHYREAVDLFYEMEKQGFKPDRVSFVSVFSACSILEDLSQGRRIHARFCDGRMKLDVSI 217
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+NMY +C + A +F + R++VSW ++I A A+ + F A E++ +M V
Sbjct: 218 GNTLLNMYARCGSLDDARLVFDSITSRNIVSWTSMIAAYAQFDRFHDAYEVFQKMGVA-- 275
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL--ECDVFVGSALVDFYAKCDNLEGA 296
PN+ TF+ ++ +CA + + IH+ V+ + + + + VG+ L++ YAKC +L A
Sbjct: 276 -PNEVTFITILGACAEARALKQAREIHSLVLTSGILEKQQLTVGNGLINTYAKCGSLSDA 334
Query: 297 HLCFSEISN--KNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSL 353
F ++ +N+V+W ++I P L ++L G NE TF VL +
Sbjct: 335 KTVFESMATAERNVVTWTSIIAACGLCGHPREALALFHRMELEGIPANEITFGTVLSACA 394
Query: 354 AF----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ LH LI+ GY+ V L+ + K G++ DA A + R +V
Sbjct: 395 DLGSTREARYLHGLIVSGGYDRDTVVCNGLINMFGKCGMLEDARAIFERMR-SRNLVTWT 453
Query: 410 IIAGIYNRTGQYNETVKLLSQLER---PDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
+ G Y + + + V L Q+ER D+++W ++AA A G E L+L+ M
Sbjct: 454 GMLGAYIQQQEIRQAVSLFQQMERISYKDVMAWTTMVAAYAQAGYADEALKLYARMGLEG 513
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS----SDTFVCNMLIDMYGKCGS 522
+ PD TFV+LL ACS++ G+ G ++ I+ S + N L+ YG CG+
Sbjct: 514 VAPDEITFVNLLHACSRM-----GAKKEGWTIRSHILERGLPSSRVLGNGLVCFYGACGT 568
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ +F + +R+ W A I G +GF +L F M G +PD + VL +
Sbjct: 569 WLQAKMVFENLAERDSAAWNAAIGVSGQHGFYDESLRLFERMVLEGMEPDEITFTNVLFS 628
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H G + F M +G+EP ++H+ C+ DL R G + EAE++++ +P ++
Sbjct: 629 CSHSGEIERAWRWFLVMRGDHGMEPNVEHWGCLADLFGRLGWIDEAERLVSFLPRTRASI 688
Query: 643 IWRTFLEGCQ 652
W T L GC+
Sbjct: 689 AWTTLLSGCK 698
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 165/565 (29%), Positives = 290/565 (51%), Gaps = 44/565 (7%)
Query: 73 ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL 132
++ +G L+ +YG+ G L E + F+ + K++ +W+ I+ ++ +H + + LF +
Sbjct: 14 SETLLGNTLVQMYGKCGNLAEARAAFDGIAEKNVFSWSIIIGLYSRHRLSREAIELFHAM 73
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
+V +F+ + S+ + LE G++IH ++ + EL +ANSL++MY C +
Sbjct: 74 ---DVRPNCVTFINTLGACSSAEFLETGKKIHAQIVAGEVELELNLANSLISMYSNCGSL 130
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
A++ F + R+VVSWN II A + ++ +A++L+ M P++ +FV V ++C
Sbjct: 131 VDAKRFFDGMNRRNVVSWNCIIAAFSGHGHYREAVDLFYEMEKQGFKPDRVSFVSVFSAC 190
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
+ L++ G+ IHA+ ++ DV +G+ L++ YA+C +L+ A L F I+++NIVSW
Sbjct: 191 SILEDLSQGRRIHARFCDGRMKLDVSIGNTLLNMYARCGSLDDARLVFDSITSRNIVSWT 250
Query: 313 ALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMG 368
++I YA + + + ++G PNE TF +L + Q ++H L++ G
Sbjct: 251 SMIAAYAQFDRFHDAYEVFQ--KMGVAPNEVTFITILGACAEARALKQAREIHSLVLTSG 308
Query: 369 -YENYEYVLGS-LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
E + +G+ L+ +YAK G +SDA +
Sbjct: 309 ILEKQQLTVGNGLINTYAKCGSLSDA-----------------------------KTVFE 339
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
++ ER ++V+W +IAAC G +E L LF M I + TF ++LSAC+ L +
Sbjct: 340 SMATAER-NVVTWTSIIAACGLCGHPREALALFHRMELEGIPANEITFGTVLSACADLGS 398
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
LHGLI DT VCN LI+M+GKCG + + IF M RN++TWT ++
Sbjct: 399 TREARYLHGLIVSGG-YDRDTVVCNGLINMFGKCGMLEDARAIFERMRSRNLVTWTGMLG 457
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
A ++A+ F++ME + +K D +A ++ A G E ++L+ RM GV
Sbjct: 458 AYIQQQEIRQAVSLFQQMERISYK-DVMAWTTMVAAYAQAGYADEALKLYARMGLE-GVA 515
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKI 631
P+ + ++ R G KE I
Sbjct: 516 PDEITFVNLLHACSRMGAKKEGWTI 540
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 139/565 (24%), Positives = 270/565 (47%), Gaps = 16/565 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M RNVVS+N II+A+S G+ +A+ +F M +GF+P + +F + S C L +
Sbjct: 140 MNRRNVVSWNCIIAAFSGHGHYREAVDLFYEMEKQGFKPDRVSFVSVFSACSILEDLSQG 199
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + +G D +G LL +Y R G LD+ VF+ + +++V+W S+++ + +
Sbjct: 200 RRIHARFCDGRMKLDVSIGNTLLNMYARCGSLDDARLVFDSITSRNIVSWTSMIAAYAQF 259
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF--DYELL 177
D +F ++ VA E +F+ ++ + + L+ +IH LV+ +G +L
Sbjct: 260 DRFHDAYEVFQKM---GVAPNEVTFITILGACAEARALKQAREIHSLVLTSGILEKQQLT 316
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEI--RDVVSWNTIIGALAESENFGKALELYLRMSV 235
V N L+N Y +C + A+ +F+ + R+VV+W +II A + +AL L+ RM +
Sbjct: 317 VGNGLINTYAKCGSLSDAKTVFESMATAERNVVTWTSIIAACGLCGHPREALALFHRMEL 376
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ + N+ TF V+++CA L ++ + +H ++ + D V + L++ + KC LE
Sbjct: 377 EGIPANEITFGTVLSACADLGSTREARYLHGLIVSGGYDRDTVVCNGLINMFGKCGMLED 436
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F + ++N+V+W ++ Y + ++ L ++ ++ Y+ + V + A
Sbjct: 437 ARAIFERMRSRNLVTWTGMLGAYIQQQEIRQAVSLFQQMERISYKDVMAWTTMVAAYAQA 496
Query: 355 FQLLQLHCLIIRMGYENY---EYVLGSLMTSYAKSGLISDALAFVTAL---NIPRAVVPA 408
+ L RMG E E +L+ + ++ G + + + +P + V
Sbjct: 497 GYADEALKLYARMGLEGVAPDEITFVNLLHACSRMGAKKEGWTIRSHILERGLPSSRVLG 556
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N + Y G + + + L D +WN I +G Y E L LF+ M +
Sbjct: 557 NGLVCFYGACGTWLQAKMVFENLAERDSAAWNAAIGVSGQHGFYDESLRLFERMVLEGME 616
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD TF ++L +CS + +++ + + L D++G+ G I + +
Sbjct: 617 PDEITFTNVLFSCSHSGEIERAWRWFLVMRGDHGMEPNVEHWGCLADLFGRLGWIDEAER 676
Query: 529 IFNEMT-DRNVITWTALISALGLNG 552
+ + + R I WT L+S ++G
Sbjct: 677 LVSFLPRTRASIAWTTLLSGCKVHG 701
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 231/492 (46%), Gaps = 40/492 (8%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
+IH + + G D E L+ N+LV MY +C + A F + ++V SW+ IIG +
Sbjct: 1 RRIHSELARTGIDSETLLGNTLVQMYGKCGNLAEARAAFDGIAEKNVFSWSIIIGLYSRH 60
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
+A+EL+ M V PN TF+ + +C+ + GK IHA+++ +E ++ +
Sbjct: 61 RLSREAIELFHAMDVR---PNCVTFINTLGACSSAEFLETGKKIHAQIVAGEVELELNLA 117
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYR 339
++L+ Y+ C +L A F ++ +N+VSWN +I ++ ++ L E+ + G++
Sbjct: 118 NSLISMYSNCGSLVDAKRFFDGMNRRNVVSWNCIIAAFSGHGHYREAVDLFYEMEKQGFK 177
Query: 340 PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
P+ +F V + C I+ + G + + G
Sbjct: 178 PDRVSFVSVFSA----------CSILE------DLSQGRRIHARFCDG------------ 209
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ V N + +Y R G ++ + + +IVSW +IAA A + + E+F
Sbjct: 210 RMKLDVSIGNTLLNMYARCGSLDDARLVFDSITSRNIVSWTSMIAAYAQFDRFHDAYEVF 269
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF-VCNMLIDMYG 518
+ M A P+ TF+++L AC++ L +H L+ + I+ V N LI+ Y
Sbjct: 270 QKMGVA---PNEVTFITILGACAEARALKQAREIHSLVLTSGILEKQQLTVGNGLINTYA 326
Query: 519 KCGSIGSSVKIFNEM--TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
KCGS+ + +F M +RNV+TWT++I+A GL G + AL F ME G + +
Sbjct: 327 KCGSLSDAKTVFESMATAERNVVTWTSIIAACGLCGHPREALALFHRMELEGIPANEITF 386
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
VL+AC G RE L + S G + + + ++++ + G L++A I M
Sbjct: 387 GTVLSACADLGSTREARYL-HGLIVSGGYDRDTVVCNGLINMFGKCGMLEDARAIFERMR 445
Query: 637 FPPNALIWRTFL 648
N + W L
Sbjct: 446 -SRNLVTWTGML 456
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 182/399 (45%), Gaps = 44/399 (11%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
+ IH+++ + ++ + +G+ LV Y KC NL A F I+ KN+ SW+ +I Y+
Sbjct: 1 RRIHSELARTGIDSETLLGNTLVQMYGKCGNLAEARAAFDGIAEKNVFSWSIIIGLYSRH 60
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLG 377
L + + RPN TF + L + + + L+ +H I+ E +
Sbjct: 61 RLSREAIELFHAMDV--RPNCVTFINTLGACSSAEFLETGKKIHAQIVAGEVELELNLAN 118
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
SL++ Y+ G + DA F +N R VV N I ++ G Y E V L ++E+
Sbjct: 119 SLISMYSNCGSLVDAKRFFDGMN-RRNVVSWNCIIAAFSGHGHYREAVDLFYEMEKQG-- 175
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
FK PD +FVS+ SACS L +L+ G +H
Sbjct: 176 ---------------------FK--------PDRVSFVSVFSACSILEDLSQGRRIHARF 206
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
+ D + N L++MY +CGS+ + +F+ +T RN+++WT++I+A A
Sbjct: 207 CDGR-MKLDVSIGNTLLNMYARCGSLDDARLVFDSITSRNIVSWTSMIAAYAQFDRFHDA 265
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP-EMDHYHCVV 616
E F++M G P+ V I +L AC +++ E+ + S +E ++ + ++
Sbjct: 266 YEVFQKM---GVAPNEVTFITILGACAEARALKQAREIHSLVLTSGILEKQQLTVGNGLI 322
Query: 617 DLLVRYGHLKEAEKIITTMPFPP-NALIWRTFLEGCQRC 654
+ + G L +A+ + +M N + W + + C C
Sbjct: 323 NTYAKCGSLSDAKTVFESMATAERNVVTWTSIIAACGLC 361
>gi|356518834|ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Glycine max]
Length = 875
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 194/665 (29%), Positives = 350/665 (52%), Gaps = 22/665 (3%)
Query: 7 VSFNSIISAYSRCGYVE-DALRMFLYM-INRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQ 62
V +N ++S +S + D +R+F M +R P T +L C L ++ G +
Sbjct: 110 VVWNIVLSGFSGSNKCDADVMRVFRMMHSSREALPNSVTVATVLPVCARLGDLDAGKCVH 169
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLD-EVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V+K+G F D G AL+ +Y + G + + +VF+++ K +V+WN++++ ++
Sbjct: 170 GYVIKSG-FDQDTLGGNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRL 228
Query: 122 VEDCMFLFCELVRSEVA---LTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELL 177
VED LF +V+ T ++ + V G QIH V++ ++
Sbjct: 229 VEDAFLLFSSMVKGPTRPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADVS 288
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVD 236
V N+L+++Y + + AE +F ++ RD+V+WN I + + KAL L+ + S++
Sbjct: 289 VCNALISLYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLASLE 348
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLEG 295
+ P+ T V ++ +CA L+N +GK IHA + ++ L D VG+ALV FYAKC E
Sbjct: 349 TLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYTEE 408
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLA 354
A+ FS IS K+++SWN++ + K + L+ +L+L RP+ T ++R +
Sbjct: 409 AYHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSVTILAIIRLCAS 468
Query: 355 F----QLLQLHCLIIRMG--YENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVP 407
++ ++H IR G N +G +++ +Y+K G + A L+ R +V
Sbjct: 469 LLRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQNLSEKRNLVT 528
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
N + Y G +++ + S + D+ +WN+++ A N ++ L L ++A +
Sbjct: 529 CNSLISGYVGLGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALGLCHELQARGM 588
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD T +SLL C+++ ++ L S G I ++ D + L+D Y KCG IG +
Sbjct: 589 KPDTVTIMSLLPVCTQMASVHLLSQCQGYIIRSCF--KDLHLEAALLDAYAKCGIIGRAY 646
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
KIF +++++ +TA+I ++G ++ AL F M LG +PD + ++L+AC H G
Sbjct: 647 KIFQLSAEKDLVMFTAMIGGYAMHGMSEEALWIFSHMLKLGIQPDHIIFTSILSACSHAG 706
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
V EG+++F + + +G++P ++ Y CVVDLL R G + EA ++T++P NA +W T
Sbjct: 707 RVDEGLKIFYSIEKLHGMKPTVEQYACVVDLLARGGRISEAYSLVTSLPIEANANLWGTL 766
Query: 648 LEGCQ 652
L C+
Sbjct: 767 LGACK 771
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 133/490 (27%), Positives = 213/490 (43%), Gaps = 31/490 (6%)
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFV--GVIHGLSNEQDLE 158
M + TW S++ + + LF ++ A V ++ S
Sbjct: 1 MLGRDFKTWGSVIWSLCLEAKHSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPN 60
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
G +HG V+K G + L+NMY +C + K+F + D V WN ++ +
Sbjct: 61 LGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFS 120
Query: 219 ESENFGKALELYLRM--SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
S + RM S PN T V+ CA L + GK +H VIK+ + D
Sbjct: 121 GSNKCDADVMRVFRMMHSSREALPNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQD 180
Query: 277 VFVGSALVDFYAKCDNL-EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
G+ALV YAKC + A+ F I+ K++VSWNA+I G A FLL +
Sbjct: 181 TLGGNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSMV 240
Query: 336 LG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
G RPN T +++L +F ++ Y G + SY
Sbjct: 241 KGPTRPNYATVANILPVCASFD-------------KSVAYYCGRQIHSYV---------- 277
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
+ + V N + +Y + GQ E L ++ D+V+WN IA NG++ +
Sbjct: 278 -LQWPELSADVSVCNALISLYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLK 336
Query: 455 VLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
L LF + + + PD+ T VS+L AC++L NL +G +H I + + DT V N L
Sbjct: 337 ALHLFGNLASLETLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNAL 396
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+ Y KCG + F+ ++ +++I+W ++ A G R L M L +PD
Sbjct: 397 VSFYAKCGYTEEAYHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDS 456
Query: 574 VALIAVLTAC 583
V ++A++ C
Sbjct: 457 VTILAIIRLC 466
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 151/601 (25%), Positives = 259/601 (43%), Gaps = 99/601 (16%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE----G 58
++VVS+N++I+ + VEDA +F M+ P T +L C S + G
Sbjct: 211 KDVVSWNAMIAGLAENRLVEDAFLLFSSMVKGPTRPNYATVANILPVCASFDKSVAYYCG 270
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + VL+ AD V AL+ LY + G + E ++F M + LVTWN+ ++ +
Sbjct: 271 RQIHSYVLQWPELSADVSVCNALISLYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTS 330
Query: 119 HGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD-YEL 176
+G + LF L E L +S + V ++ + ++L+ G+QIH + ++ F Y+
Sbjct: 331 NGEWLKALHLFGNLASLETLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDT 390
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V N+LV+ Y +C A F + ++D++SWN+I A E + + L L M
Sbjct: 391 AVGNALVSFYAKCGYTEEAYHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKL 450
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA---LECDVFVGSALVDFYAKCDNL 293
+ P+ T + +I CA L K IH+ I+ VG+A++D Y+KC N+
Sbjct: 451 RIRPDSVTILAIIRLCASLLRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNM 510
Query: 294 E----------------------------GAH----LCFSEISNKNIVSWNALILGYASK 321
E G+H + FS +S ++ +WN ++ YA
Sbjct: 511 EYANKMFQNLSEKRNLVTCNSLISGYVGLGSHHDANMIFSGMSETDLTTWNLMVRVYAEN 570
Query: 322 SSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCL------IIRMGYENYEY 374
P ++ L EL G +P+ T +L + Q+ +H L IIR +++ +
Sbjct: 571 DCPEQALGLCHELQARGMKPDTVTIMSLL--PVCTQMASVHLLSQCQGYIIRSCFKDL-H 627
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
+ +L+ +YAK G+I A K+
Sbjct: 628 LEAALLDAYAKCGIIGRAY--------------------------------KIFQLSAEK 655
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG---- 490
D+V + +I A +G +E L +F +M I PD+ F S+LSACS + G
Sbjct: 656 DLVMFTAMIGGYAMHGMSEEALWIFSHMLKLGIQPDHIIFTSILSACSHAGRVDEGLKIF 715
Query: 491 ---SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALIS 546
LHG+ E + C ++D+ + G I + + + + N W L+
Sbjct: 716 YSIEKLHGMKPTVE-----QYAC--VVDLLARGGRISEAYSLVTSLPIEANANLWGTLLG 768
Query: 547 A 547
A
Sbjct: 769 A 769
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKY-MRAARIY-PDNYTFVSLLSACSKLCNLALGSS 492
D +W VI + + E L LF + ++ + PD+ ++L +CS L LG +
Sbjct: 5 DFKTWGSVIWSLCLEAKHSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPNLGRT 64
Query: 493 LHGLIKKTEIISSDTFVCNM-LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL-GL 550
LHG + K V N L++MY KCG + +K+F++++ + + W ++S G
Sbjct: 65 LHGYVVKQG--HGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFSGS 122
Query: 551 NGFAQRALEKFREM----EFLGFKPDRVALIAVLTACRHGGLVREG 592
N + FR M E L P+ V + VL C G + G
Sbjct: 123 NKCDADVMRVFRMMHSSREAL---PNSVTVATVLPVCARLGDLDAG 165
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 193/623 (30%), Positives = 295/623 (47%), Gaps = 80/623 (12%)
Query: 81 LLGLYGRHGCLDEVVSVFEDMPRKS--LVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVA 138
L+ Y GCL VS+ P + WNS++ +G +G C++LF +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
+F V + GE H L + GF + V N+LV MY +C + A K+
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 199 FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQN 257
F ++ + DVVSWN+II + A+ ALE++ RM+ + P+ T V V+ CA L
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
LGK +H + + + ++FVG+ LVD YAKC ++ A+ FS +S K++VSWNA++ G
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 318 YASKSSPTSIFLLIELLQ----------------------LGY--------------RPN 341
Y+ L E +Q LGY +PN
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 342 EFTFSHVLRSSLAFQLL----QLHCLIIRM-------GYENYEYVLGSLMTSYAKSGLIS 390
E T VL + L ++HC I+ G+ + V+ L+ YAK +
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 391 DALAFVTALNIP-RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
A A +L+ R VV ++ G Y++ G N+ ++LLS++ D
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED-------------- 470
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
+ P+ +T L AC+ L L +G +H + + + FV
Sbjct: 471 ---------------CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
N LIDMY KCGSI + +F+ M +N +TWT+L++ G++G+ + AL F EM +GF
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
K D V L+ VL AC H G++ +GME F RM +GV P +HY C+VDLL R G L A
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAAL 635
Query: 630 KIITTMPFPPNALIWRTFLEGCQ 652
++I MP P ++W FL C+
Sbjct: 636 RLIEEMPMEPPPVVWVAFLSCCR 658
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 150/628 (23%), Positives = 268/628 (42%), Gaps = 106/628 (16%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQ 60
D V +NS+I +Y G L +F M + + P +TF + +C ++ V G
Sbjct: 89 DAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGES 148
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
A L G F ++ FVG AL+ +Y R L + VF++M +V+WNSI+ + K G
Sbjct: 149 AHALSLVTG-FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 121 FVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + +F + ++ + V V+ ++ G+Q+H + + + V
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS----- 234
N LV+MY +C + A +F ++ ++DVVSWN ++ ++ F A+ L+ +M
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 235 VDIVF------------------------------PNQTTFVYVINSCAGLQNSILGKSI 264
+D+V PN+ T + V++ CA + + GK I
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 265 HAKVIKNALEC-------DVFVGSALVDFYAKCDNLEGAHLCFSEISNK--NIVSWNALI 315
H IK ++ + V + L+D YAKC ++ A F +S K ++V+W +I
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 316 LGYASKSSPT-SIFLLIELLQ--LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY 372
GY+ ++ LL E+ + RPN FT S L + + L++ I N
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 507
Query: 373 E-----YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
+ +V L+ YAK G ISDA + V +++ G Y G E + +
Sbjct: 508 QNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTG-YGMHGYGEEALGI 566
Query: 428 LSQLERP----DIVSWNIVIAACAHNGDYKEVLELFKYMR---AARIYPDNYTFVSLLSA 480
++ R D V+ +V+ AC+H+G + +E F M+ P++Y A
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHY-------A 619
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVI 539
C L+D+ G+ G + +++++ EM + +
Sbjct: 620 C-------------------------------LVDLLGRAGRLNAALRLIEEMPMEPPPV 648
Query: 540 TWTALISALGLNG---FAQRALEKFREM 564
W A +S ++G + A EK E+
Sbjct: 649 VWVAFLSCCRIHGKVELGEYAAEKITEL 676
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/660 (27%), Positives = 341/660 (51%), Gaps = 42/660 (6%)
Query: 1 MPDR-NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVE 57
MP +VVS+NS+IS Y + G ++ ++ +FL M + G T L SL + V
Sbjct: 116 MPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVL 175
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ ++ G F D G+AL+ +Y + L++ + VF ++P K+ ++W++ ++
Sbjct: 176 GIQIHGIAVQMG-FDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCV 234
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ + + LF E+ R + +++S++ V + G Q+H +K F +++
Sbjct: 235 QNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVI 294
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V + ++MY +C + A K+F + ++ S+N +I A +E +A +L+L++ +
Sbjct: 295 VGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNS 354
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
++ + +++ A ++ G +H IK+ L ++ V +A++D Y KC L A
Sbjct: 355 FSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEAS 414
Query: 298 LCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F E+ ++ VSWNA+I ++S ++ +L+ P+EFT+ VL++ +
Sbjct: 415 GLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQR 474
Query: 357 L----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+++H II+ G +V +L+ Y+K G++ +A
Sbjct: 475 AFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEA-------------------- 514
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K+ +LE +VSWN +I+ + ++ F +M + PDN+
Sbjct: 515 ------------EKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNF 562
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T+ ++L C+ L + LG +H + K E++S D ++ + L+DMY KCG++ S+ +F +
Sbjct: 563 TYATVLDTCANLATVGLGKQIHAQMIKLELLS-DVYITSTLVDMYSKCGNMHDSLLMFRK 621
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
R+ +TW A+I +G + ALE F M KP+ ++VL AC H G ++G
Sbjct: 622 APKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKG 681
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F++M Y +EP+++HY C+VD+L R G ++EA ++I MPF +A+IWRT L C+
Sbjct: 682 LFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICK 741
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 156/567 (27%), Positives = 283/567 (49%), Gaps = 55/567 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+PD+N +S+++ I+ + + L++F M +G +Q T+ + SC L+ G
Sbjct: 218 LPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLG 277
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL LK F +D VGTA L +Y + + + +F +P +L ++N+++ + +
Sbjct: 278 TQLHCHALKTD-FGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYAR 336
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ LF +L ++ + E S G + + + G Q+HGL IK+ + V
Sbjct: 337 NEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICV 396
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN++++MY +C + A +F ++EIRD VSWN II A ++E+ GK L + M +
Sbjct: 397 ANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKM 456
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ T+ V+ +CAG + G +H ++IK+ + +FVGSALVD Y+KC +E A
Sbjct: 457 EPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEK 516
Query: 299 CFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
+ + +VSWNA+I G++ K S S +L++G P+ FT++ VL +
Sbjct: 517 IHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLAT 576
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ Q+H +I++ + Y+ +L+ Y+K G + D+L
Sbjct: 577 VGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLL------------------- 617
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+ + + D V+WN +I A++G +E LELF++M I P++ T
Sbjct: 618 -------------MFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHAT 664
Query: 474 FVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
FVS+L ACS + N G +S++ L + E S ++D+ G+ G + +
Sbjct: 665 FVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSC-------MVDILGRSGQVEEA 717
Query: 527 VKIFNEMT-DRNVITWTALISALGLNG 552
+++ +M + + I W L+S + G
Sbjct: 718 LRLIQDMPFEADAIIWRTLLSICKIQG 744
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 164/638 (25%), Positives = 297/638 (46%), Gaps = 79/638 (12%)
Query: 52 SLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWN- 110
+L P G + A ++ +G F FV L+ +Y + L+ VFE+MP++ +V+WN
Sbjct: 39 ALKP--GKEAHAHMILSG-FTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDIVSWNT 95
Query: 111 -------------------------------SIVSIFGKHGFVEDCMFLFCELVRSEVAL 139
S++S + ++G ++ + +F ++ V
Sbjct: 96 MVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMF 155
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
++ + S +D G QIHG+ ++ GFDY+++ ++LV+MY +C + + +F
Sbjct: 156 DHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVF 215
Query: 200 KDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
++ ++ +SW+ I +++ + L+L+ M + +Q+T+ V SCAGL S
Sbjct: 216 SELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASR 275
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
LG +H +K DV VG+A +D YAKCDN+ A+ FS + + N+ S+NA+I+GYA
Sbjct: 276 LGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYA 335
Query: 320 SKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEY 374
F L ++L + + +E + S L ++ + LQLH L I+
Sbjct: 336 RNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKS------- 388
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
N+ + AN I +Y + G E L ++E
Sbjct: 389 -------------------------NLSSNICVANAILDMYGKCGALVEASGLFDEMEIR 423
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
D VSWN +I AC N + L F M +++ PD +T+ S+L AC+ + G +H
Sbjct: 424 DPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVH 483
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
G I K+ + FV + L+DMY KCG + + KI + ++ +++W A+IS L +
Sbjct: 484 GRIIKSG-MGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKS 542
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY-- 612
+ + F M +G +PD VL C + V G ++ +M + +E D Y
Sbjct: 543 EDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIK---LELLSDVYIT 599
Query: 613 HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+VD+ + G++ ++ + P +++ W + G
Sbjct: 600 STLVDMYSKCGNMHDSLLMFRKAP-KRDSVTWNAMICG 636
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 242/526 (46%), Gaps = 71/526 (13%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
+F + SN + L+ G++ H +I +GF + V N L+ MY +C + A K+F+++
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 203 EIRDVVSWNTIIGALA--------------------------------ESENFGKALELY 230
RD+VSWNT++ A ++ + K++ ++
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
L+M V + TT + C+ L++ +LG IH ++ + DV GSALVD YAKC
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL 349
++LE + FSE+ +KN +SW+A I G + L E+ + G ++ T++ V
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265
Query: 350 RSSLAFQL----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
RS QLHC ++ + + V + + YAK +SDA
Sbjct: 266 RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAY------------ 313
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
KL S L ++ S+N +I A N + +LF ++
Sbjct: 314 --------------------KLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKN 353
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
D + LSA + + + G LHGL K+ +SS+ V N ++DMYGKCG++
Sbjct: 354 SFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSN-LSSNICVANAILDMYGKCGALVE 412
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ +F+EM R+ ++W A+I+A N + L F M +PD +VL AC
Sbjct: 413 ASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAG 472
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
GME+ R+ +S G+ +M +VD+ + G ++EAEKI
Sbjct: 473 QRAFSNGMEVHGRIIKS-GMGLKMFVGSALVDMYSKCGMMEEAEKI 517
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 188/610 (30%), Positives = 303/610 (49%), Gaps = 45/610 (7%)
Query: 50 CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
C S+ E Q ++KNGL+ F T L+ L+ + G L E VF+ + K +
Sbjct: 87 CTSMK--ELHQFIPLIIKNGLYSEHLF-QTKLVSLFCKFGSLHEAARVFQPIEDKIDELY 143
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
++++ + ++ ++D + FC + V +F ++ + DL G++IH +I
Sbjct: 144 HTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIV 203
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-ALE 228
NGF + +VNMY +C + A KMF + RD+V WNTII A++ FGK ALE
Sbjct: 204 NGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQN-GFGKTALE 262
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
L LRM + P+ T V ++ + A + + +G+SIH ++ E V V +ALVD Y+
Sbjct: 263 LVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYS 322
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
KC ++ A L F ++ K +VSWN++I GY P +
Sbjct: 323 KCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGA---------------------- 360
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA------LAFVTALNIP 402
A ++ Q +M E E ++M + + D + L +
Sbjct: 361 -----AMEIFQ------KMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELG 409
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
V N + +Y++ + + ++ L+ +VSWN +I A NG E ++ F M
Sbjct: 410 SDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKM 469
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ I PD++T VS++ A ++L L +HGL+ +T + + FV L+DMY KCG+
Sbjct: 470 QLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRT-CLDKNVFVATALVDMYAKCGA 528
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ ++ K+F+ M +R+V TW A+I G +G + ALE F +M+ KP+ V + VL+A
Sbjct: 529 VHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSA 588
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H GLV EG + F M + YG+EP MDHY +VDLL R L EA I MP P
Sbjct: 589 CSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAIS 648
Query: 643 IWRTFLEGCQ 652
++ L C+
Sbjct: 649 VFGAMLGACR 658
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 153/616 (24%), Positives = 283/616 (45%), Gaps = 79/616 (12%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVL 66
+++++ Y+R ++DA+ F M G P + F LL D+ + +G ++ ++
Sbjct: 143 YHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLI 202
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
NG F ++ F T ++ +Y + ++E +F+ MP + LV WN+I+S + ++GF + +
Sbjct: 203 VNG-FASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTAL 261
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
L + + V ++ +++ L G IHG ++ GF+ + V+ +LV+MY
Sbjct: 262 ELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMY 321
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+C + +A +F + + VVSWN++I ++ + G A+E++ +M + V T +
Sbjct: 322 SKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVM 381
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
+++CA L + G+ +H + + L DV V ++L+ Y+KC ++ A F + +K
Sbjct: 382 GALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHK 441
Query: 307 NIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS----SLAFQLLQLH 361
+VSWNA+ILGYA +QL +P+ FT V+ + S+ Q +H
Sbjct: 442 TLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIH 501
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
L+IR + +V +L+ YAK G + A
Sbjct: 502 GLVIRTCLDKNVFVATALVDMYAKCGAVHTAR---------------------------- 533
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
KL ++ + +WN +I +G K LELF+ M+ I P+ TF+ +LSAC
Sbjct: 534 ----KLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSAC 589
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
S + G G +KK + +D YG
Sbjct: 590 SHSGLVEEGFQYFGSMKK-------DYGLEPAMDHYG----------------------- 619
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER-MN 600
A++ LG A R E + ++ + +P A+L ACR + + +EL E+ N
Sbjct: 620 -AMVDLLGR---ANRLNEAWDFIQKMPIEPAISVFGAMLGACR----IHKNVELGEKAAN 671
Query: 601 RSYGVEPEMDHYHCVV 616
R + ++P+ YH ++
Sbjct: 672 RIFDLDPDDGGYHVLL 687
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 217/420 (51%), Gaps = 23/420 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
MP+R++V +N+IIS Y++ G+ + AL + L M G P T +L D + G
Sbjct: 236 MPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIG 295
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ ++ G F + V TAL+ +Y + G + +F+ M K++V+WNS++ + +
Sbjct: 296 RSIHGYSMRAG-FESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQ 354
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G M +F +++ +V +T + +G +H ++ D+E G +H L+ + ++ V
Sbjct: 355 NGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSV 414
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY +C + A ++F++++ + +VSWN +I A++ +A++ + +M + +
Sbjct: 415 MNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNI 474
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T V VI + A L K IH VI+ L+ +VFV +ALVD YAKC + A
Sbjct: 475 KPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARK 534
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQL 357
F + +++ +WNA+I GY + + L E ++ +PNE TF VL +
Sbjct: 535 LFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSAC----- 589
Query: 358 LQLHCLIIRMGYENY-----EYVLGSLMTSY-------AKSGLISDALAFVTALNIPRAV 405
H ++ G++ + +Y L M Y ++ +++A F+ + I A+
Sbjct: 590 --SHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAI 647
>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 993
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 190/657 (28%), Positives = 325/657 (49%), Gaps = 43/657 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEG 58
MP RNVVS+ +I+ A S G +E+AL + M G ++S C +L + V G
Sbjct: 105 MPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAG 164
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A V+ +GL V +L+ ++G + + +F+ M + ++WN+++S++
Sbjct: 165 LQVTAHVVVSGLL-THVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSH 223
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
C + ++ EV ++ ++ ++ + G IH L + +G + +
Sbjct: 224 EEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPL 283
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE-LYLRMSVDI 237
N+LVNMY + AE +F+++ RDV+SWNT+I + +S + +ALE L + D
Sbjct: 284 INALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDE 343
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN TF + +C+ + + G++IHA +++ +L+ + +G++L+ Y+KC+++E
Sbjct: 344 GPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTE 403
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQ 356
F + ++VS N L GYA+ + + ++ G +PN T ++ + +
Sbjct: 404 RVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG 463
Query: 357 LLQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L LH + + G + EY+ SL+T YA G + +
Sbjct: 464 DLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESS------------------- 504
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
GI++R + ++SWN +IAA +G +E ++LF + A D
Sbjct: 505 TGIFSR-------------INNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDR 551
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ LS+ + L +L G LHGL K + D+ V N +DMYGKCG + +K
Sbjct: 552 FCLAECLSSSANLASLEEGMQLHGLSVKNGL-DCDSHVVNATMDMYGKCGKMDCMLKTLP 610
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ R W LIS G+ + A + F+ M +G KPD V +A+L+AC H GL+ +
Sbjct: 611 DPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDK 670
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
GM+ + M ++GV P + H C+VDLL R G EAEK I MP PN LIWR+ L
Sbjct: 671 GMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLL 727
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 177/668 (26%), Positives = 311/668 (46%), Gaps = 54/668 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP R S+ + +S +RCG A + M R + F L++ C+ EGA
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 60 QLQASVL----KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
A++ + GL + ++GTALL LYG G + +F +MP++++V+W +I+
Sbjct: 61 ACGAAIHALTHRAGLM-GNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVA 119
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+G +E+ + + + + V ++ V+ +D G Q+ V+ +G
Sbjct: 120 LSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTH 179
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ VANSL+ M+ + AE++F +E RD +SWN +I + E + K + M
Sbjct: 180 VSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRH 239
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V P+ TT +++ CA LG IH+ + + L C V + +ALV+ Y+ L+
Sbjct: 240 GEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299
Query: 296 AHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSL 353
A F +S ++++SWN +I Y S S ++ L +LLQ PN TFS L +
Sbjct: 300 AESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACS 359
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ + L +H +I++ +N + SL+T Y+K + D
Sbjct: 360 SPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMED------------------ 401
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
T ++ + D+VS N++ A D + +F +MR I P
Sbjct: 402 --------------TERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKP 447
Query: 470 DNYTFVSLLSACSKLCNL-ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
+ T ++L C L +L + G LH + +T ++ SD ++ N LI MY CG + SS
Sbjct: 448 NYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL-SDEYITNSLITMYATCGDLESSTG 506
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
IF+ + +++VI+W A+I+A +G + A++ F + + G K DR L L++ +
Sbjct: 507 IFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLAS 566
Query: 589 VREGMELFERMNRSYGVEPEMD-HYHCVVDLLVRYGHLKEAEKIITTMPFPPN--ALIWR 645
+ EGM+L V+ +D H V + YG + + ++ T+P P + W
Sbjct: 567 LEEGMQL-----HGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWN 621
Query: 646 TFLEGCQR 653
T + G R
Sbjct: 622 TLISGYAR 629
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/625 (29%), Positives = 310/625 (49%), Gaps = 33/625 (5%)
Query: 31 YMINRGFEPTQFTFGGLL-SC-DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRH 88
Y+ +G + + + LL SC + + G Q+ +L+ G+ + ++ LL LY
Sbjct: 34 YLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMK-PNVYIINTLLKLYVHC 92
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI 148
G ++E +F+ KS+V+WN ++S + G ++ LF + + + + +FV ++
Sbjct: 93 GSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSIL 152
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
S+ L +G ++H V++ G V N+L++MY +C + A ++F + RD V
Sbjct: 153 SACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEV 212
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SW T+ GA AES ++L+ Y M + V P++ T++ V+++C L GK IHA++
Sbjct: 213 SWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQI 272
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
+++ DV V +AL Y KC ++ A F + N+++++WN +I G
Sbjct: 273 VESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAH 332
Query: 329 -LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
+ +L+ P+ T+ +L S + L C G E + + K G
Sbjct: 333 GMFHRMLKECVAPDRVTYLAIL--SACARPGGLAC-----GKEIHARAV--------KDG 377
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
L+SD V N + +Y++ G + ++ ++ + D+VSW ++ A
Sbjct: 378 LVSD-------------VRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYA 424
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
G E FK M + + T++ +L ACS L G +H + K I + D
Sbjct: 425 DCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFA-DL 483
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
V N L+ MY KCGS+ ++++ M+ R+V+TW LI L NG AL+KF M+
Sbjct: 484 AVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSE 543
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
+P+ + V++ACR LV EG F M + YG+ P HY C+VD+L R GHL E
Sbjct: 544 EMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGE 603
Query: 628 AEKIITTMPFPPNALIWRTFLEGCQ 652
AE +I TMPF P+A +W L C+
Sbjct: 604 AEDVILTMPFKPSAAMWGALLAACR 628
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 148/572 (25%), Positives = 295/572 (51%), Gaps = 40/572 (6%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
+++VVS+N +IS Y+ G ++A +F M G EP +FTF +LS C S + G +
Sbjct: 107 NKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGRE 166
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ V++ GL +A VG AL+ +Y + G + + VF+ M + V+W ++ + + G
Sbjct: 167 VHVRVMEAGL-ANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESG 225
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ ++ + + +++ V + +++ V+ + LE G+QIH ++++ ++ V+
Sbjct: 226 YAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVST 285
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L MY +C + A ++F+ + RDV++WNT+IG L +S +A ++ RM + V P
Sbjct: 286 ALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAP 345
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
++ T++ ++++CA GK IHA+ +K+ L DV G+AL++ Y+K +++ A F
Sbjct: 346 DRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVF 405
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
+ +++VSW AL+ GYA F ++LQ G N+ T+ VL++
Sbjct: 406 DRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKAC------- 458
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+ + ++ G E + V+ K+G+ +D + AN + +Y + G
Sbjct: 459 SNPVALKWGKEIHAEVV--------KAGIFAD-------------LAVANALMSMYFKCG 497
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+ +++ + D+V+WN +I A NG E L+ F+ M++ + P+ TFV+++S
Sbjct: 498 SVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMS 557
Query: 480 ACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR- 536
AC + G ++K I + + C ++D+ + G +G + + M +
Sbjct: 558 ACRVRNLVEEGRRQFASMRKDYGIVPTEKHYAC--MVDILARAGHLGEAEDVILTMPFKP 615
Query: 537 NVITWTALISALGLNG---FAQRALEKFREME 565
+ W AL++A +G ++A E+ ++E
Sbjct: 616 SAAMWGALLAACRAHGNVEIGEQAAEQCLKLE 647
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 218/455 (47%), Gaps = 32/455 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M R+ VS+ ++ AY+ GY +++L+ + M+ G P++ T+ +LS C SL +E G
Sbjct: 206 MASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKG 265
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A ++++ +D V TAL +Y + G + + VFE +P + ++ WN+++
Sbjct: 266 KQIHAQIVESEHH-SDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVD 324
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G +E+ +F +++ VA +++ ++ + L G++IH +K+G ++
Sbjct: 325 SGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRF 384
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+NMY + + A ++F + RDVVSW ++G A+ ++ + +M V
Sbjct: 385 GNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGV 444
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N+ T++ V+ +C+ GK IHA+V+K + D+ V +AL+ Y KC ++E A
Sbjct: 445 EANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIR 504
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
+S +++V+WN LI G A E+++ RPN TF +V+ + L
Sbjct: 505 VSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNL 564
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+ E S+ Y G++ + ++ I R
Sbjct: 565 V-----------EEGRRQFASMRKDY---GIVPTEKHYACMVD-------------ILAR 597
Query: 418 TGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
G E ++ + +P W ++AAC +G+
Sbjct: 598 AGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGN 632
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 195/415 (46%), Gaps = 40/415 (9%)
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
+V ++ SC ++ +GK +H +++ ++ +V++ + L+ Y C ++ A F + S
Sbjct: 47 YVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFS 106
Query: 305 NKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL----Q 359
NK++VSWN +I GYA + F L L+Q G P++FTF +L + + L +
Sbjct: 107 NKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGRE 166
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+H ++ G N V +L++ YAK G + DA
Sbjct: 167 VHVRVMEAGLANNATVGNALISMYAKCGSVRDAR-------------------------- 200
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
++ + D VSW + A A +G +E L+ + M + P T++++LS
Sbjct: 201 ------RVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLS 254
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
AC L L G +H I ++E SD V L MY KCG++ + ++F + +R+VI
Sbjct: 255 ACGSLAALEKGKQIHAQIVESEH-HSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVI 313
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
W +I L +G + A F M PDRV +A+L+AC G + G E+ R
Sbjct: 314 AWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARA 373
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC 654
+ G+ ++ + ++++ + G +K+A ++ MP + + W + G C
Sbjct: 374 VKD-GLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTALVGGYADC 426
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 94/179 (52%), Gaps = 2/179 (1%)
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
++ +Y+ D+Y +V LL +C K +LA+G +H I + + + ++ N L+ +
Sbjct: 30 DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGM-KPNVYIINTLLKL 88
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y CGS+ + ++F++ ++++V++W +IS G Q A F M+ G +PD+
Sbjct: 89 YVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTF 148
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+++L+AC + G E+ R+ + G+ + ++ + + G +++A ++ M
Sbjct: 149 VSILSACSSPAALNWGREVHVRVMEA-GLANNATVGNALISMYAKCGSVRDARRVFDAM 206
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 203/659 (30%), Positives = 327/659 (49%), Gaps = 47/659 (7%)
Query: 4 RNVVSFNSIISAYS-RCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQ 60
R +N++I A+S D + M+ RG + TF +L DS + +G +
Sbjct: 121 RTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGME 180
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ V K G F D +VG LL LYG G L++ +F++MP + +V+WN+I+ + +G
Sbjct: 181 VHGVVFKLG-FDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNG 239
Query: 121 -FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ E + F ++RS + S + ++ + +D E +IH +K G D ++
Sbjct: 240 DYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTC 299
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI-V 238
N+LV+ Y +C + + ++F + ++ VSWN+II LA AL + RM +D
Sbjct: 300 NALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAF-RMMIDAGA 358
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T ++ L+ GK IH ++ E D+F+ ++L+D YAK + A
Sbjct: 359 QPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEAST 418
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + +NIVSWNA+I YA P +I +I++ + G PN TF++VL +
Sbjct: 419 IFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGF 478
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L ++H + +R+G + +V SL+ YAK G + A
Sbjct: 479 LGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSA-------------------RN 519
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++N + R D VS+NI+I + D + L LF MR PD +
Sbjct: 520 VFNTS--------------RKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVS 565
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FV ++SAC+ L L G +HG+ + + S FV N L+D Y KCG I + ++FN++
Sbjct: 566 FVGVISACANLAALKQGKEVHGVALRNHLYSH-LFVSNSLLDFYTKCGRIDIACRLFNQI 624
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++V +W +I G+ G + A+ F M + D V+ IAVL+AC HGGLV G
Sbjct: 625 LFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGW 684
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F M + +EP HY C+VDLL R G ++EA K+I +P P+A IW L C+
Sbjct: 685 QYFSEM-LAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACR 742
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 168/654 (25%), Positives = 291/654 (44%), Gaps = 101/654 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLLSCDSLNPVEGA 59
MP+R+VVS+N+II S G +A + +MI R +P L+S SL P+ A
Sbjct: 220 MPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPN------LVSVISLLPISAA 273
Query: 60 QLQASVLKNGLFCADAFVG--------TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNS 111
L+ + + C VG AL+ YG+ G + + VF + K+ V+WNS
Sbjct: 274 -LEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNS 332
Query: 112 IVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG 171
I++ G D + F ++ + + ++ L + + G++IHG ++ G
Sbjct: 333 IINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMG 392
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
+ ++ +ANSL++MY + A +F +++ R++VSWN +I A + +A+ +
Sbjct: 393 TETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVI 452
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
+M PN TF V+ +CA L GK IHA ++ L D+FV ++L+D YAKC
Sbjct: 453 QMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCG 512
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLR 350
L A F+ S K+ VS+N LI+GY+ + S+ L E+ LG +P+ +F V+
Sbjct: 513 CLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVIS 571
Query: 351 SSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+ L ++H + +R ++ +V SL+ Y K G I A
Sbjct: 572 ACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIA-------------- 617
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
+L +Q+ D+ SWN +I G+ + + +F+ MR
Sbjct: 618 ------------------CRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDT 659
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
+ D +++++LSACS HG G +
Sbjct: 660 VQYDLVSYIAVLSACS-----------HG-------------------------GLVERG 683
Query: 527 VKIFNEMTDRNV----ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ F+EM + + + +T ++ LG GF + A + ++ L PD A+L A
Sbjct: 684 WQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQ---LPIAPDANIWGALLGA 740
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV-DLLVRYGHLKEAEKIITTM 635
CR G V G E + + ++P+ Y+ ++ ++ G EA KI M
Sbjct: 741 CRIYGNVELGRRAAEHL---FELKPQHCGYYILLSNIYAETGRWDEANKIRELM 791
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 213/495 (43%), Gaps = 48/495 (9%)
Query: 152 SNEQDLEFGEQIHGLVIKNGF-DYELLVANSLVNMY--FQCAGIWSA--EKMFKDVEIRD 206
S Q L +Q+H L I NGF + + SL+ Y FQ G + + + F++ R
Sbjct: 65 SKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQNC--RT 122
Query: 207 VVSWNTIIGALAESENFG-KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
WNT+I A + + N E Y RM V + TF +V+ C+ + G +H
Sbjct: 123 AFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVH 182
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI--LGYASKSS 323
V K + DV+VG+ L+ Y C L A F E+ +++VSWN +I L +
Sbjct: 183 GVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYT 242
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ----LLQLHCLIIRMGYENYEYVLGSL 379
+ +L+ +PN + +L S A + ++HC +++G ++ +L
Sbjct: 243 EARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNAL 302
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+ +Y K G + + ++N T + NE VSW
Sbjct: 303 VDAYGKCGSVK-------------------ALWQVFNETVEKNE-------------VSW 330
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
N +I A G + L F+ M A P++ T S+L +L G +HG +
Sbjct: 331 NSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMR 390
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+D F+ N LIDMY K G + IF+ + RN+++W A+I+ LN A+
Sbjct: 391 MG-TETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIR 449
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
+M+ G P+ V VL AC G + G E+ M G+ ++ + ++D+
Sbjct: 450 FVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEI-HAMGVRIGLTSDLFVSNSLIDMY 508
Query: 620 VRYGHLKEAEKIITT 634
+ G L A + T
Sbjct: 509 AKCGCLHSARNVFNT 523
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 174/389 (44%), Gaps = 42/389 (10%)
Query: 252 CAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLEGAHLCFSEI--SNKNI 308
C+ +Q+ + K +HA I N L V + ++L+ YAK + F++ + +
Sbjct: 64 CSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQNCRTA 123
Query: 309 VSWNALILGYASKSSPT--SIFLLIELLQLGYRPNEFTFSHVLR-SSLAFQL---LQLHC 362
WN LI ++ + T +++ G + ++ TF VL+ S +F + +++H
Sbjct: 124 FLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHG 183
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
++ ++G++ YV +L+ Y G ++DA + R VV N I G+ + G Y
Sbjct: 184 VVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMP-ERDVVSWNTIIGLLSVNGDYT 242
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
E A N + +L + I P+ + +SLL +
Sbjct: 243 E-----------------------ARNYYFWMILR-------SVIKPNLVSVISLLPISA 272
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
L + + +H K + S T CN L+D YGKCGS+ + ++FNE ++N ++W
Sbjct: 273 ALEDEEMTRRIHCYSVKVGLDSQVT-TCNALVDAYGKCGSVKALWQVFNETVEKNEVSWN 331
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
++I+ L G AL FR M G +P+ V + ++L + G E+ +
Sbjct: 332 SIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEI-HGFSMR 390
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
G E ++ + ++D+ + GH EA I
Sbjct: 391 MGTETDIFIANSLIDMYAKSGHSTEASTI 419
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 7/181 (3%)
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
Y ++LL+ CSK+ +L +H L + +C LI Y K GS +FN
Sbjct: 55 YIHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFN 114
Query: 532 EMTD--RNVITWTALISA--LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+ R W LI A + NG E + M G + D VL C
Sbjct: 115 QTFQNCRTAFLWNTLIRAHSIAWNGTFD-GFETYNRMVRRGVQLDDHTFPFVLKLCSDSF 173
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
+ +GME+ + + G + ++ + ++ L G L +A ++ MP + + W T
Sbjct: 174 DICKGMEVHGVVFK-LGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMP-ERDVVSWNTI 231
Query: 648 L 648
+
Sbjct: 232 I 232
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 190/657 (28%), Positives = 325/657 (49%), Gaps = 43/657 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEG 58
MP RNVVS+ +I+ A S G +E+AL + M G ++S C +L + V G
Sbjct: 105 MPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAG 164
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A V+ +GL V +L+ ++G + + +F+ M + ++WN+++S++
Sbjct: 165 LQVTAHVVVSGLL-THVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSH 223
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
C + ++ EV ++ ++ ++ + G IH L + +G + +
Sbjct: 224 EEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPL 283
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE-LYLRMSVDI 237
N+LVNMY + AE +F+++ RDV+SWNT+I + +S + +ALE L + D
Sbjct: 284 INALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDE 343
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN TF + +C+ + + G++IHA +++ +L+ + +G++L+ Y+KC+++E
Sbjct: 344 GPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTE 403
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQ 356
F + ++VS N L GYA+ + + ++ G +PN T ++ + +
Sbjct: 404 RVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG 463
Query: 357 LLQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L LH + + G + EY+ SL+T YA G + +
Sbjct: 464 DLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESS------------------- 504
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
GI++R + ++SWN +IAA +G +E ++LF + A D
Sbjct: 505 TGIFSR-------------INNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDR 551
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ LS+ + L +L G LHGL K + D+ V N +DMYGKCG + +K
Sbjct: 552 FCLAECLSSSANLASLEEGMQLHGLSVKNGL-DCDSHVVNATMDMYGKCGKMDCMLKTLP 610
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ R W LIS G+ + A + F+ M +G KPD V +A+L+AC H GL+ +
Sbjct: 611 DPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDK 670
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
GM+ + M ++GV P + H C+VDLL R G EAEK I MP PN LIWR+ L
Sbjct: 671 GMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLL 727
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 177/668 (26%), Positives = 311/668 (46%), Gaps = 54/668 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP R S+ + +S +RCG A + M R + F L++ C+ EGA
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 60 QLQASVL----KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
A++ + GL + ++GTALL LYG G + +F +MP++++V+W +I+
Sbjct: 61 ACGAAIHALTHRAGLM-GNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVA 119
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+G +E+ + + + + V ++ V+ +D G Q+ V+ +G
Sbjct: 120 LSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTH 179
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ VANSL+ M+ + AE++F +E RD +SWN +I + E + K + M
Sbjct: 180 VSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRH 239
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V P+ TT +++ CA LG IH+ + + L C V + +ALV+ Y+ L+
Sbjct: 240 GEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299
Query: 296 AHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSL 353
A F +S ++++SWN +I Y S S ++ L +LLQ PN TFS L +
Sbjct: 300 AESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACS 359
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ + L +H +I++ +N + SL+T Y+K + D
Sbjct: 360 SPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMED------------------ 401
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
T ++ + D+VS N++ A D + +F +MR I P
Sbjct: 402 --------------TERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKP 447
Query: 470 DNYTFVSLLSACSKLCNL-ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
+ T ++L C L +L + G LH + +T ++ SD ++ N LI MY CG + SS
Sbjct: 448 NYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL-SDEYITNSLITMYATCGDLESSTG 506
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
IF+ + +++VI+W A+I+A +G + A++ F + + G K DR L L++ +
Sbjct: 507 IFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLAS 566
Query: 589 VREGMELFERMNRSYGVEPEMD-HYHCVVDLLVRYGHLKEAEKIITTMPFPPN--ALIWR 645
+ EGM+L V+ +D H V + YG + + ++ T+P P + W
Sbjct: 567 LEEGMQL-----HGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWN 621
Query: 646 TFLEGCQR 653
T + G R
Sbjct: 622 TLISGYAR 629
>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 190/648 (29%), Positives = 340/648 (52%), Gaps = 36/648 (5%)
Query: 8 SFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQASV 65
SFNS++S S G L+ ++ M + +TF L +C +LN G L SV
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
+ NGL D+++G++L+ Y + GC+ VF+ M ++++V W +I+ + + G ++
Sbjct: 76 VVNGL-SHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIA 134
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
+F ++ S + T + + ++ G+S L +H L+I +GF+ +L ++NS+VNM
Sbjct: 135 FSMFKQMRESGIQPTSVTLLSLLPGISK---LPLLLCLHCLIILHGFESDLALSNSMVNM 191
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C I A ++F+ ++ RD+VSWN+++ A ++ + L+L M ++ + P++ TF
Sbjct: 192 YGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
+++ A + LGK +H ++K+ L D V SALV Y +C L+ A+ F +
Sbjct: 252 CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311
Query: 306 KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
K++V W A+I G + ++ + ++++ +P+ T L S LA QL C
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTAT----LASGLA-ACAQLGCCD 366
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
I G + YVL + G++ L+IP N + +Y + + ++
Sbjct: 367 I--GASIHGYVL--------RQGIM---------LDIP----AQNSLVTMYAKCNKLQQS 403
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+ +++ D+VSWN ++A A NG + + F MR + + PD+ T SLL AC
Sbjct: 404 CSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSA 463
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
L G +H + ++ +I L+DMY KCG++ ++ K F+ M R+++ W+ L
Sbjct: 464 GALCQGKWIHNFVLRSSLIPC-IMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTL 522
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I G NG + AL K+ E G +P+ V I+VL+AC HGGL+ +G+ ++E M + +
Sbjct: 523 IVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFR 582
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ P ++H CVVDLL R G + EA M P+ ++ L+ C+
Sbjct: 583 MSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACR 630
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 144/574 (25%), Positives = 272/574 (47%), Gaps = 36/574 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M RNVV + +II +YSR G ++ A MF M G +PT T LL S P+
Sbjct: 110 MLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCL 169
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+L F +D + +++ +YG+ G + + +F+ + + +V+WNS++S + K G
Sbjct: 170 HCLIILHG--FESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIG 227
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
E+ + L + ++ + +F + + + DL G+ +HGL++K+G + + V +
Sbjct: 228 ATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVES 287
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+LV +Y +C + A K+FK +DVV W +I L +++ KAL ++ +M V P
Sbjct: 288 ALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKP 347
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T + +CA L +G SIH V++ + D+ ++LV YAKC+ L+ + F
Sbjct: 348 STATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIF 407
Query: 301 SEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQLL 358
+++ K++VSWNA++ G+A IF E+ + RP+ T + +L++ A L
Sbjct: 408 NKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALC 467
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
Q G + +VL S + IP ++ + +Y +
Sbjct: 468 Q--------GKWIHNFVLRSSL--------------------IP-CIMTETALVDMYFKC 498
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
G K + + D+V+W+ +I NG + L + + P++ F+S+L
Sbjct: 499 GNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVL 558
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRN 537
SACS ++ G S++ + K +S + ++D+ + G + + + M + +
Sbjct: 559 SACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPS 618
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
++ L+ A +NG + L K + KP
Sbjct: 619 IVVLGMLLDACRVNGRVE--LGKVIARDMFELKP 650
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/555 (23%), Positives = 250/555 (45%), Gaps = 35/555 (6%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+ E + ++NS+VS G + + + ++ L +F + +N
Sbjct: 5 IHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNL 64
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
G +H V+ NG ++ + +SL++ Y + I K+F + R+VV W TIIG+
Sbjct: 65 FSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGS 124
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ + A ++ +M + P T + ++ G+ L +H +I + E D
Sbjct: 125 YSREGDIDIAFSMFKQMRESGIQPTSVTLLSLL---PGISKLPLLLCLHCLIILHGFESD 181
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
+ + +++V+ Y KC + A F I ++IVSWN+L+ Y+ + I L++ +++
Sbjct: 182 LALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKI 241
Query: 337 -GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
+P++ TF L +S L+L G + L
Sbjct: 242 EDIKPDKQTFCSALSASAIKGDLRL--------------------------GKLVHGLML 275
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
LNI + V A ++ +Y R + K+ D+V W +I+ N +
Sbjct: 276 KDGLNIDQHVESALVV--LYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKA 333
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
L +F M + + P T S L+AC++L +G+S+HG + + I+ D N L+
Sbjct: 334 LGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIM-LDIPAQNSLVT 392
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY KC + S IFN+M ++++++W A+++ NG+ + + F EM +PD +
Sbjct: 393 MYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSIT 452
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+ ++L AC G + +G + + RS + P + +VD+ + G+L+ A+K M
Sbjct: 453 VTSLLQACGSAGALCQGKWIHNFVLRS-SLIPCIMTETALVDMYFKCGNLENAQKCFDCM 511
Query: 636 PFPPNALIWRTFLEG 650
+ + W T + G
Sbjct: 512 -LQRDLVAWSTLIVG 525
>gi|302783925|ref|XP_002973735.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
gi|300158773|gb|EFJ25395.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
Length = 836
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 190/656 (28%), Positives = 332/656 (50%), Gaps = 49/656 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M +++V++N++ A G LR M +G +P T+ + S + G +
Sbjct: 185 MARKDIVTWNAMAGASVHNGQSHKLLR---EMDLQGVKPNATTYASITRGSS--TLTGCR 239
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L + + V AL+ +Y + G L+ VF + RK +++W++++S + + G
Sbjct: 240 AMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGARKVFNRLERKDVISWSTMISAYNQSG 299
Query: 121 FVEDCMFLFCELVRSEVALTES--SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + ++ L+ SE ++ + +FVGVI + D+ G Q+HG ++ G + ++ V
Sbjct: 300 RHSEAIEIY-RLMESETSVEPNAVTFVGVIGACTGCGDVIRGIQVHGRLVSLGLETDVAV 358
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++LV MY +C + A+K F VE RDV+ WN ++ A +E + + +E Y M V+
Sbjct: 359 GSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYEAMDVE-- 416
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T+ V+ +C+ +++ G+ +H++++ + LE D+ + +AL+ Y KC +L+ A
Sbjct: 417 -PNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETALLSLYIKCRSLKSACQ 475
Query: 299 CFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + K+++ WN +++GY T ++ L + + G N TF++ L++ +
Sbjct: 476 VFEAMGKKDVIPWNFMMVGYIDHDCDTEALRLYARMHEAGVEANNVTFANALKACSKIKD 535
Query: 358 LQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
++ + +I G+E +L+ YA G + A + G
Sbjct: 536 IETGSKVEAMITTKGFETDVVTDTALLNMYAACGDLE----------------AAKRVFG 579
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+R G ER D+V W +IA+ A G +E L L+K M + I P++ T
Sbjct: 580 --SRRG------------ERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVT 625
Query: 474 FVSLLSACSKLCNLALGSSLHGLIK-KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+ S+LSACS L N+ G +H ++ K E + D V N L+ MY +CGS+ + F +
Sbjct: 626 YTSVLSACSSLGNILEGRKIHSKLEGKAEEL--DVAVQNSLLSMYARCGSLRDAWSCFAK 683
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ +R+V +WT +++A +G + RALE REME G PD V +VL AC H G + G
Sbjct: 684 IHNRDVFSWTGMVAAFAHHGHSARALELVREMELCGVSPDAVTFQSVLHACSHEGSLERG 743
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
F M Y VEP DHY C+VDLL R G L EA ++I + ++ W L
Sbjct: 744 WASFVSMAVDYAVEPSKDHYLCMVDLLARAGRLAEAREVIQFVGLERESMGWMMLL 799
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 172/639 (26%), Positives = 306/639 (47%), Gaps = 56/639 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M +NV S++ +I AY++ G+ +A +F M + G P T +L +C N +
Sbjct: 84 MQQKNVYSWSMMIGAYAQNGHRNEAFLLFERMESEGIRPNAVTCLHVLGACSYQNELPFG 143
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + + F D + T+L+ +Y + G + +VF+ M RK +VTWN++ +
Sbjct: 144 KKVHAYISASEFKWDISLQTSLVNMYAKCGSPADAKAVFDSMARKDIVTWNAMAGASVHN 203
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G L E+ V +++ + G S EQ ++ +G+ + V
Sbjct: 204 GQSHK---LLREMDLQGVKPNATTYASITRGSSTLTGCRAMEQ---RLLASGYMSHVPVQ 257
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI-V 238
N+LVN+Y +C + A K+F +E +DV+SW+T+I A +S +A+E+Y M + V
Sbjct: 258 NALVNVYAKCGDLEGARKVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESETSV 317
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN TFV VI +C G + I G +H +++ LE DV VGSALV Y KC +LE A
Sbjct: 318 EPNAVTFVGVIGACTGCGDVIRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKK 377
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F + ++++ WN ++ Y+ + SP + E + + PN T+++VL + A + L
Sbjct: 378 AFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYEAMDV--EPNAVTYTNVLIACSAMEDL 435
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
++H I+ G E + +L++ Y K + A A+
Sbjct: 436 AQGQKVHSRIVSSGLETDMTMETALLSLYIKCRSLKSACQVFEAMG-------------- 481
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWN-IVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+ D++ WN +++ H+ D E L L+ M A + +N T
Sbjct: 482 ------------------KKDVIPWNFMMVGYIDHDCD-TEALRLYARMHEAGVEANNVT 522
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F + L ACSK+ ++ GS + +I T+ +D L++MY CG + ++ ++F
Sbjct: 523 FANALKACSKIKDIETGSKVEAMI-TTKGFETDVVTDTALLNMYAACGDLEAAKRVFGSR 581
Query: 534 TD--RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
R+V+ WTA+I++ G + AL ++ M KP+ V +VL+AC G + E
Sbjct: 582 RGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILE 641
Query: 592 GMELFERMNRSYGVEPEMD--HYHCVVDLLVRYGHLKEA 628
G ++ ++ G E+D + ++ + R G L++A
Sbjct: 642 GRKIHSKLE---GKAEELDVAVQNSLLSMYARCGSLRDA 677
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/558 (23%), Positives = 265/558 (47%), Gaps = 51/558 (9%)
Query: 81 LLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALT 140
L+ L+G+ G + VF+ M +K++ +W+ ++ + ++G + LF + +
Sbjct: 64 LIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLLFERMESEGIRPN 123
Query: 141 ESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
+ + V+ S + +L FG+++H + + F +++ + SLVNMY +C A+ +F
Sbjct: 124 AVTCLHVLGACSYQNELPFGKKVHAYISASEFKWDISLQTSLVNMYAKCGSPADAKAVFD 183
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
+ +D+V+WN + GA S + G++ +L M + V PN TT+ + + L
Sbjct: 184 SMARKDIVTWNAMAGA---SVHNGQSHKLLREMDLQGVKPNATTYASITRGSSTLTGC-- 238
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY-- 318
+++ +++ + V V +ALV+ YAKC +LEGA F+ + K+++SW+ +I Y
Sbjct: 239 -RAMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGARKVFNRLERKDVISWSTMISAYNQ 297
Query: 319 -ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA----FQLLQLHCLIIRMGYENYE 373
S I+ L+E + PN TF V+ + + +Q+H ++ +G E
Sbjct: 298 SGRHSEAIEIYRLME-SETSVEPNAVTFVGVIGACTGCGDVIRGIQVHGRLVSLGLETDV 356
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
V +L+ Y K G + DA K ++E+
Sbjct: 357 AVGSALVQMYVKCGSLEDA--------------------------------KKAFDRVEK 384
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
D++ WN +++A + G ++V+E ++ M + P+ T+ ++L ACS + +LA G +
Sbjct: 385 RDVLCWNFMLSAYSERGSPQQVIEAYEAM---DVEPNAVTYTNVLIACSAMEDLAQGQKV 441
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H I + + +D + L+ +Y KC S+ S+ ++F M ++VI W ++ +
Sbjct: 442 HSRIVSSG-LETDMTMETALLSLYIKCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDHDC 500
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
AL + M G + + V L AC + G ++ E M + G E ++
Sbjct: 501 DTEALRLYARMHEAGVEANNVTFANALKACSKIKDIETGSKV-EAMITTKGFETDVVTDT 559
Query: 614 CVVDLLVRYGHLKEAEKI 631
++++ G L+ A+++
Sbjct: 560 ALLNMYAACGDLEAAKRV 577
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 139/557 (24%), Positives = 268/557 (48%), Gaps = 51/557 (9%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLL-SCDSLNPV-EGAQ 60
++V+S++++ISAY++ G +A+ ++ M + EP TF G++ +C V G Q
Sbjct: 283 KDVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGIQ 342
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ ++ GL D VG+AL+ +Y + G L++ F+ + ++ ++ WN ++S + + G
Sbjct: 343 VHGRLVSLGLE-TDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFMLSAYSERG 401
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + + + +V ++ V+ S +DL G+++H ++ +G + ++ +
Sbjct: 402 SPQQVIEAYEAM---DVEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMET 458
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L+++Y +C + SA ++F+ + +DV+ WN ++ + + +AL LY RM V
Sbjct: 459 ALLSLYIKCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDHDCDTEALRLYARMHEAGVEA 518
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N TF + +C+ +++ G + A + E DV +AL++ YA C +LE A F
Sbjct: 519 NNVTFANALKACSKIKDIETGSKVEAMITTKGFETDVVTDTALLNMYAACGDLEAAKRVF 578
Query: 301 SEI--SNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLR--SSLA- 354
+++V W A+I YA + ++ L +L +PN T++ VL SSL
Sbjct: 579 GSRRGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGN 638
Query: 355 -FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ ++H + E V SL++ YA+ G + DA + A
Sbjct: 639 ILEGRKIHSKLEGKAEELDVAVQNSLLSMYARCGSLRDAWS---------------CFAK 683
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
I+NR D+ SW ++AA AH+G LEL + M + PD T
Sbjct: 684 IHNR-----------------DVFSWTGMVAAFAHHGHSARALELVREMELCGVSPDAVT 726
Query: 474 FVSLLSACSKLCNLALG--SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
F S+L ACS +L G S + + S D ++C ++D+ + G + + ++
Sbjct: 727 FQSVLHACSHEGSLERGWASFVSMAVDYAVEPSKDHYLC--MVDLLARAGRLAEAREVIQ 784
Query: 532 EMT-DRNVITWTALISA 547
+ +R + W L+ A
Sbjct: 785 FVGLERESMGWMMLLGA 801
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 233/473 (49%), Gaps = 42/473 (8%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L+ ++ + + ++F ++ ++V SW+ +IGA A++ + +A L+ RM + +
Sbjct: 62 NWLIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLLFERMESEGIR 121
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN T ++V+ +C+ GK +HA + + + D+ + ++LV+ YAKC + A
Sbjct: 122 PNAVTCLHVLGACSYQNELPFGKKVHAYISASEFKWDISLQTSLVNMYAKCGSPADAKAV 181
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
F ++ K+IV+WNA + AS + S LL E+ G +PN T++ + R S +
Sbjct: 182 FDSMARKDIVTWNA--MAGASVHNGQSHKLLREMDLQGVKPNATTYASITRGSSTLTGCR 239
Query: 360 -LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
+ ++ GY ++ V +L+ YAK G + A
Sbjct: 240 AMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGAR------------------------- 274
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA-ARIYPDNYTFVSL 477
K+ ++LER D++SW+ +I+A +G + E +E+++ M + + P+ TFV +
Sbjct: 275 -------KVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGV 327
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
+ AC+ ++ G +HG + + +D V + L+ MY KCGS+ + K F+ + R+
Sbjct: 328 IGACTGCGDVIRGIQVHGRLVSLG-LETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRD 386
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
V+ W ++SA G Q+ +E + M+ +P+ V VL AC + +G ++
Sbjct: 387 VLCWNFMLSAYSERGSPQQVIEAYEAMD---VEPNAVTYTNVLIACSAMEDLAQGQKVHS 443
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
R+ S G+E +M ++ L ++ LK A ++ M + + W + G
Sbjct: 444 RIVSS-GLETDMTMETALLSLYIKCRSLKSACQVFEAMG-KKDVIPWNFMMVG 494
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 162/363 (44%), Gaps = 50/363 (13%)
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
+V+ + L+ + K N + + F + KN+ SW+ +I YA FLL E ++
Sbjct: 57 NVYFRNWLIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLLFERME 116
Query: 336 L-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
G RPN T HVL + Y+N E G + +Y + ++
Sbjct: 117 SEGIRPNAVTCLHVLGAC---------------SYQN-ELPFGKKVHAYISASEFKWDIS 160
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
T+L +Y + G + + + R DIV+WN + A HNG +
Sbjct: 161 LQTSL------------VNMYAKCGSPADAKAVFDSMARKDIVTWNAMAGASVHNG---Q 205
Query: 455 VLELFKYMRAARIYPDNYTFVSL------LSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
+L + M + P+ T+ S+ L+ C + L S S
Sbjct: 206 SHKLLREMDLQGVKPNATTYASITRGSSTLTGCRAMEQRLLASGYM----------SHVP 255
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF-L 567
V N L+++Y KCG + + K+FN + ++VI+W+ +ISA +G A+E +R ME
Sbjct: 256 VQNALVNVYAKCGDLEGARKVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESET 315
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
+P+ V + V+ AC G V G+++ R+ S G+E ++ +V + V+ G L++
Sbjct: 316 SVEPNAVTFVGVIGACTGCGDVIRGIQVHGRL-VSLGLETDVAVGSALVQMYVKCGSLED 374
Query: 628 AEK 630
A+K
Sbjct: 375 AKK 377
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 111/232 (47%), Gaps = 11/232 (4%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEGAQL 61
R+VV + ++I++Y++ G E+AL ++ M++ +P T+ +LS C SL N +EG ++
Sbjct: 586 RDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKI 645
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
S L+ D V +LL +Y R G L + S F + + + +W +V+ F HG
Sbjct: 646 H-SKLEGKAEELDVAVQNSLLSMYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFAHHGH 704
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ L E+ V+ +F V+H S+E LE G + DY + +
Sbjct: 705 SARALELVREMELCGVSPDAVTFQSVLHACSHEGSLERG---WASFVSMAVDYAVEPSKD 761
Query: 182 ----LVNMYFQCAGIWSAEKMFKDVEI-RDVVSWNTIIGALAESENFGKALE 228
+V++ + + A ++ + V + R+ + W ++GA N +E
Sbjct: 762 HYLCMVDLLARAGRLAEAREVIQFVGLERESMGWMMLLGASRTHSNLAMGVE 813
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 191/657 (29%), Positives = 327/657 (49%), Gaps = 41/657 (6%)
Query: 7 VSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQ--FTFGGLL-SCDSLNPVEGAQLQA 63
+ +N +I ++ G A+ ++ M + P+ T ++ SC +L + +L
Sbjct: 105 LPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVH 164
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+ D +VG+AL+ +Y G L F+ +P + V WN ++ K G V+
Sbjct: 165 RTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVD 224
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ LF + S ++ + + + DL G Q+H L +K G + E+ VAN+L+
Sbjct: 225 GAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLL 284
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
MY +C + A ++F+ + D+V+WN +I ++ F +A L+ M P+
Sbjct: 285 AMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSI 344
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
T V ++ + L GK +H +++N + DVF+ SALVD Y KC ++ A +
Sbjct: 345 TLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAA 404
Query: 304 SNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL---- 358
++V + +I GY + S ++ + LL+ +PN T + VL + L
Sbjct: 405 RAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQ 464
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
Q+H ++R YE YV +LM YAK G + ++ I+ +
Sbjct: 465 QIHGYVLRNAYERKCYVESALMDMYAKCGRL-------------------DLSHYIFLKM 505
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
Q +E V+WN +I++ + NG +E L+LF+ M I +N T + L
Sbjct: 506 SQKDE-------------VTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAAL 552
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
SAC+ L + G +HG+ K I +D F + LIDMY KCG++ ++++F M D+N
Sbjct: 553 SACASLPAIYYGKEIHGVTIKGPI-KADIFAESALIDMYAKCGNLELALRVFEFMPDKNE 611
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
++W ++ISA G +G + ++ M+ G+KPD V +A+++AC H GLV EG++LF+
Sbjct: 612 VSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQC 671
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
M + Y + P M+H+ C+VDL R G L +A + I MPF P+A IW L C+ R
Sbjct: 672 MTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHR 728
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 139/483 (28%), Positives = 249/483 (51%), Gaps = 18/483 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP--VEG 58
+P+R+ V +N ++ + G V+ A+R+F M G EP T LS + + + G
Sbjct: 202 IPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSG 261
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
AQL + +K GL + V LL +Y + CLD+ +FE MP+ LVTWN ++S +
Sbjct: 262 AQLHSLAVKCGLE-PEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQ 320
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + LF ++ RS + V ++ L++ L+ G+++HG +++N + ++ +
Sbjct: 321 NGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFL 380
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++LV++YF+C + A+ ++ DVV +T+I + +AL+++ + +
Sbjct: 381 VSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCI 440
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T V+ CA + LG+ IH V++NA E +V SAL+D YAKC L+ +H
Sbjct: 441 KPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHY 500
Query: 299 CFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F ++S K+ V+WN++I ++ P ++ L ++ G + N T S L + +
Sbjct: 501 IFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPA 560
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ ++H + I+ + + +L+ YAK G + AL V + V N I
Sbjct: 561 IYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALR-VFEFMPDKNEVSWNSIIS 619
Query: 414 IYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELF-----KYMRA 464
Y G E+V LL ++ +PD V++ +I+ACAH G +E ++LF KY+ A
Sbjct: 620 AYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIA 679
Query: 465 ARI 467
R+
Sbjct: 680 PRM 682
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 203/473 (42%), Gaps = 51/473 (10%)
Query: 129 FCELVRSEVA-LTESS----FVGVIHGLSNEQDLEFGEQIHGLVIKNGF--DYELLVANS 181
FC S A +T+ S + V+ G + L G QIH + +G D+ L ++
Sbjct: 15 FCSTTFSATAAVTDVSSADRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHT 74
Query: 182 -LVNMYFQCAGIWSAEKMFKDVEIRDVVS---WNTIIGALAESENFGKALELYLRM--SV 235
L+ MY A +F + S WN +I + A+ Y++M
Sbjct: 75 RLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHP 134
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
P+ T YV+ SCA L LG+ +H L DV+VGSALV YA L
Sbjct: 135 AAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGN 194
Query: 296 AHLCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLR-SSL 353
A F I ++ V WN ++ G + ++ L + G PN T + L +
Sbjct: 195 ARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCAT 254
Query: 354 AFQLL---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
LL QLH L ++ G E V +L+ YAK + DA
Sbjct: 255 DADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAW----------------- 297
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+L + + D+V+WN +I+ C NG + E LF M+ + PD
Sbjct: 298 ---------------RLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPD 342
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ T VSLL A + L L G +HG I + ++ D F+ + L+D+Y KC + + ++
Sbjct: 343 SITLVSLLPALTDLNGLKQGKEVHGYIVRN-CVNMDVFLVSALVDIYFKCRDVRMAQNLY 401
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ +V+ + +IS LNG ++ AL+ FR + KP+ V + +VL C
Sbjct: 402 DAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGC 454
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 186/632 (29%), Positives = 320/632 (50%), Gaps = 50/632 (7%)
Query: 47 LLSCDSLNPV-EGAQLQASVLKNGLF----CADAFVGTALLGLYGRHGCLDEVVSVFEDM 101
L +C L + EG ++ V++ L ++ + ++ +Y R GC D + VF+ M
Sbjct: 17 LTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDRM 76
Query: 102 PRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN-EQDLEFG 160
+++V W S++S F G D M LF +++ S V+ +F ++ S E++L+ G
Sbjct: 77 KDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDEG 136
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
+++H +++ G++ + +V N +V MY +C + A +F ++ +V SW II A A++
Sbjct: 137 KRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQN 196
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN-ALECDVFV 279
+ + L L RM+ V P+ TF V+ +C + K +HA I + L+ D V
Sbjct: 197 GHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAV 256
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GY 338
G+AL++ Y KC LE A F +I NK+IVSW+++I +A S L+ L+ L G
Sbjct: 257 GTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGV 316
Query: 339 RPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
RPN TF +VL + + + Q +H I++ GY + + +L+ Y G + A +
Sbjct: 317 RPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARS 376
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
S ER D+VSW+ +IA + N
Sbjct: 377 IFE-------------------------------SSRER-DVVSWSSMIAGYSQNESPAR 404
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
L LF+ M + P++ TFVS + AC+ + L G+ LH ++ + D V L+
Sbjct: 405 ALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLG-LDKDVPVATALV 463
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
++YGKCG + + +F M +N++TWT++ A G NG R+L+ ME G KPD +
Sbjct: 464 NLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGI 523
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
+A+L +C + G + +G+ + M + +G+ P ++H C+VD+L R G L+ AE++I T
Sbjct: 524 VFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINT 583
Query: 635 MPFPPNALIWRTFLEGCQRCRIAKYDTLNSTK 666
M F ++L W L C+ A DT + +
Sbjct: 584 MKF-ESSLAWMMLLTACK----AHNDTARAAR 610
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/579 (24%), Positives = 277/579 (47%), Gaps = 37/579 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL---SCDSLNPVE 57
M D+NVV++ S+ISA++ G+ DA+ +F M+ G P + TF +L S N E
Sbjct: 76 MKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDE 135
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ + +++ G + D V ++ +YG+ G +++ +VF+ + ++ +W I++ +
Sbjct: 136 GKRVHSHIMQTG-YEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYA 194
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYEL 176
++G + + L + ++ V +F V+ + LE + +H I + G D +
Sbjct: 195 QNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDA 254
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V +L+N+Y +C + A +F ++ +D+VSW+++I A A+S A++L + M ++
Sbjct: 255 AVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLE 314
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN TFV V+ + L+ GK IHA++++ DV + SALV Y +E A
Sbjct: 315 GVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETA 374
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF 355
F +++VSW+++I GY+ SP L +++ G +PN TF + +
Sbjct: 375 RSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGV 434
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L R G + +E V L + + V A + +Y
Sbjct: 435 GAL-------RRGTQLHER---------------------VRCLGLDKDVPVATALVNLY 466
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G+ E + +++ ++++W + A NG L+L M + PD FV
Sbjct: 467 GKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFV 526
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
++L +C+ ++ G + L+ + I+ C ++D+ G+ G + ++ ++ N M
Sbjct: 527 AILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKF 586
Query: 536 RNVITWTALISALGLN---GFAQRALEKFREMEFLGFKP 571
+ + W L++A + A RA EK ++E P
Sbjct: 587 ESSLAWMMLLTACKAHNDTARAARAAEKIFQLEPKNATP 625
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 144/523 (27%), Positives = 254/523 (48%), Gaps = 45/523 (8%)
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF-----DYELLVANSLVNMYFQCA 190
E+ S+ ++ S+ + L G+++HGLV++ E L+ N ++ MY +C
Sbjct: 5 EIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCG 64
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
A +F ++ ++VV+W ++I A + +FG A+ L+ +M + V P++ TF ++
Sbjct: 65 CTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILL 124
Query: 251 SCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
+G + ++ GK +H+ +++ E D V + +V+ Y KC ++E A F I + N+
Sbjct: 125 KWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVF 184
Query: 310 SWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLI 364
SW +I YA + LL + Q G +P+ +TF+ VL + A L+ LH
Sbjct: 185 SWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAAT 244
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
I + +GL DA +N +Y + G E
Sbjct: 245 I------------------SSTGLDRDAAVGTALIN-------------LYGKCGALEEA 273
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+ Q++ DIVSW+ +IAA A +G K ++L M + P+N TFV++L A + L
Sbjct: 274 FGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSL 333
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
G +H I + S D + + L+ MY G + ++ IF +R+V++W+++
Sbjct: 334 KAFQYGKEIHARIVQAG-YSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSM 392
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I+ N RAL FREME G +P+ V ++ + AC G +R G +L ER+ R G
Sbjct: 393 IAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERV-RCLG 451
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
++ ++ +V+L + G L+EAE + M N L W +
Sbjct: 452 LDKDVPVATALVNLYGKCGRLEEAEAVFLGMK-KKNLLTWTSI 493
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 245/492 (49%), Gaps = 50/492 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+ D NV S+ II+AY++ G+ + LR+ M G +P +TF +L +C ++ +E A
Sbjct: 178 IQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEA 237
Query: 60 Q-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ L A+ + + DA VGTAL+ LYG+ G L+E VF + K +V+W+S+++ F +
Sbjct: 238 KILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQ 297
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + L + V +FV V+ +++ + ++G++IH +++ G+ ++ +
Sbjct: 298 SGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCL 357
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++LV MY + +A +F+ RDVVSW+++I +++E+ +AL L+ M VD V
Sbjct: 358 TSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGV 417
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN TFV I++CAG+ G +H +V L+ DV V +ALV+ Y KC LE A
Sbjct: 418 QPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEA 477
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F + KN+++W ++ + Y + L+ ++L G +P+ F +L S
Sbjct: 478 VFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSC----- 532
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAG 413
NY +G +S L + + + PA +
Sbjct: 533 -------------NY-------------AGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVD 566
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC-AHNGDYKEVLELFKYMRAA----RIY 468
I R G+ +L++ ++ ++W +++ AC AHN + + RAA ++
Sbjct: 567 ILGRAGKLEAAEQLINTMKFESSLAWMMLLTACKAHN-------DTARAARAAEKIFQLE 619
Query: 469 PDNYTFVSLLSA 480
P N T LLS+
Sbjct: 620 PKNATPYVLLSS 631
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 11/190 (5%)
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS----SDTFVCNMLIDMY 517
M A I + ++L+ACS L L G +HGL+ + ++ ++ + N++I MY
Sbjct: 1 MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
+CG ++ +F+ M D+NV+ WT+LISA G A+ FR+M G PDR+
Sbjct: 61 LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFT 120
Query: 578 AVLTACRHGGLVR---EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
++L + G R EG + + ++ G E + + VV++ + G +++A + +
Sbjct: 121 SILL--KWSGRERNLDEGKRVHSHIMQT-GYEGDRMVMNLVVEMYGKCGDVEQAGNVFDS 177
Query: 635 MPFPPNALIW 644
+ PN W
Sbjct: 178 IQ-DPNVFSW 186
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/535 (31%), Positives = 272/535 (50%), Gaps = 43/535 (8%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGI-----------------WS----------- 194
+H VIK+GF E+ + N L++ Y +C + W+
Sbjct: 42 VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGF 101
Query: 195 ---AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
A+ +F+ + RD +WN+++ A+ + +AL + M + N+ TF +++
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSA 161
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
C+GL + G IH+ + K+ DV++GSALVD Y+KC N+ A F E+ ++N+VSW
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSW 221
Query: 312 NALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIR 366
N+LI Y + + +L+ P+E T + V+ + + + ++H +++
Sbjct: 222 NSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVK 281
Query: 367 MGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
M + +L + + YAK I +A ++ I + ++++G Y
Sbjct: 282 MDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSG-YAMAASTKAAR 340
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
+ +++ ++VSWN +IA NG+ +E L LF ++ + P +YTF ++L AC+ L
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLA 400
Query: 486 NLALGSSLHGLIKKTEII-----SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
+L LG H + K D FV N LIDMY KCG + +F +M +R+ ++
Sbjct: 401 DLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W A+I NG+ ALE FREM G KPD + +I VL+AC H G V EG F M
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 520
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
R +GV P DHY C+VDLL R G L+EA+ II MP P+++IW + L C+ R
Sbjct: 521 RDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHR 575
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 149/578 (25%), Positives = 258/578 (44%), Gaps = 106/578 (18%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
N +I AY++CG +ED ++F M R FT+ ++
Sbjct: 59 NRLIDAYAKCGSLEDGRQLFDKMPQRNV----FTWNSVV--------------------- 93
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
T L L G LDE S+F MP + TWNS+VS F +H E+ ++ F
Sbjct: 94 ---------TGLTKL----GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYF 140
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
+ + L E +F + S D+ G QIH L+ K+ ++ + ++LV+MY +C
Sbjct: 141 AMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKC 200
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A+++F ++ R+VVSWN++I ++ +AL+++ M V P++ T VI
Sbjct: 201 GNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVI 260
Query: 250 NSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCDNL--------------- 293
++CA L +G+ +HA+V+K + L D+ + +A VD YAKC +
Sbjct: 261 SACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNV 320
Query: 294 ----------------EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL- 336
+ A L F++++ +N+VSWNALI GY L LL+
Sbjct: 321 IAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
P +TF+++L++ L L H +++ G++ +SG D
Sbjct: 381 SVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFK-------------FQSGEEDD- 426
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+ N + +Y + G E + ++ D VSWN +I A NG
Sbjct: 427 ------------IFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYG 474
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVC 510
E LELF+ M + PD+ T + +LSAC + G + + ++ D + C
Sbjct: 475 NEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTC 534
Query: 511 NMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISA 547
++D+ G+ G + + I EM + + W +L++A
Sbjct: 535 --MVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAA 570
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 236/492 (47%), Gaps = 78/492 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPV-EG 58
MP+R+ ++NS++S +++ E+AL F M GF ++TF GL +C LN + G
Sbjct: 112 MPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRG 171
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + + K+ +D ++G+AL+ +Y + G +++ VF++M +++V+WNS+++ + +
Sbjct: 172 VQIHSLIAKSPCL-SDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQ 230
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELL 177
+G + + +F ++ S V E + VI ++ ++ G+++H V+K + +++
Sbjct: 231 NGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDII 290
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEI-------------------------------RD 206
++N+ V+MY +C+ I A +F + I R+
Sbjct: 291 LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERN 350
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
VVSWN +I ++ +AL L+ + + V P TF ++ +CA L + LG H
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHV 410
Query: 267 KVIKNAL------ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
V+K+ E D+FVG++L+D Y KC +E +L F ++ ++ VSWNA+I+G+A
Sbjct: 411 HVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ 470
Query: 321 KS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
++ L E+L G +P+ T VL
Sbjct: 471 NGYGNEALELFREMLDSGEKPDHITMIGVL------------------------------ 500
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RP 434
++ +G + + + +++ V P + + R G E ++ ++ +P
Sbjct: 501 -SACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQP 559
Query: 435 DIVSWNIVIAAC 446
D V W ++AAC
Sbjct: 560 DSVIWGSLLAAC 571
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 186/414 (44%), Gaps = 74/414 (17%)
Query: 226 ALELYLRMSVDIV-FPNQTTFVYVINSCAGLQNSILG-KSIHAKVIKNALECDVFVGSAL 283
A +++L+++ D+ F + F +++SC L+ S + + +HA VIK+ +VF+ + L
Sbjct: 2 ARKIFLKLAGDLSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRL 61
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-----------KSSP-------- 324
+D YAKC +LE F ++ +N+ +WN+++ G +S P
Sbjct: 62 IDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWN 121
Query: 325 -------------TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRM 367
+++ + + G+ NE+TF+ L + + Q+H LI
Sbjct: 122 SMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLI--- 178
Query: 368 GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
AKS +SD V + + +Y++ G N+ ++
Sbjct: 179 ----------------AKSPCLSD-------------VYIGSALVDMYSKCGNVNDAQQV 209
Query: 428 LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNL 487
++ ++VSWN +I NG E L++F+ M + + PD T S++SAC+ L +
Sbjct: 210 FDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAI 269
Query: 488 ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISA 547
+G +H + K + + +D + N +DMY KC I + IF+ M RNVI T+++S
Sbjct: 270 KVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSG 329
Query: 548 LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
+ + A F +M + + V+ A++ G E + LF + R
Sbjct: 330 YAMAASTKAARLMFTKMA----ERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379
>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 190/648 (29%), Positives = 339/648 (52%), Gaps = 36/648 (5%)
Query: 8 SFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQASV 65
SFNS++S S G L+ ++ M + +TF L +C +LN G L SV
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
+ NGL D+++G++L+ Y + GC+ VF+ M ++++V W +I+ + + G ++
Sbjct: 76 VVNGL-SHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIA 134
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
+F ++ S + T + + ++ G+S L +H L+I +GF+ +L ++NS+VNM
Sbjct: 135 FSMFKQMRESGIQPTSVTLLSLLPGISK---LPLLLCLHCLIILHGFESDLALSNSMVNM 191
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C I A ++F+ + RD+VSWN+++ A ++ + L+L M ++ + P++ TF
Sbjct: 192 YGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
+++ A + LGK +H ++K+ L D V SALV Y +C L+ A+ F +
Sbjct: 252 CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311
Query: 306 KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
K++V W A+I G + ++ + ++++ +P+ T L S LA QL C
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTAT----LASGLA-ACAQLGCCD 366
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
I G + YVL + G++ L+IP N + +Y + + ++
Sbjct: 367 I--GASIHGYVL--------RQGIM---------LDIP----AQNSLVTMYAKCNKLQQS 403
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+ +++ D+VSWN ++A A NG + + F MR + + PD+ T SLL AC
Sbjct: 404 CSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSA 463
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
L G +H + ++ +I L+DMY KCG++ ++ K F+ M R+++ W+ L
Sbjct: 464 GALCQGKWIHNFVLRSSLIPC-IMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTL 522
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I G NG + AL K+ E G +P+ V I+VL+AC HGGL+ +G+ ++E M + +
Sbjct: 523 IVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFR 582
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ P ++H CVVDLL R G + EA M P+ ++ L+ C+
Sbjct: 583 MSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACR 630
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 145/574 (25%), Positives = 272/574 (47%), Gaps = 36/574 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M RNVV + +II +YSR G ++ A MF M G +PT T LL S P+
Sbjct: 110 MLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCL 169
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+L F +D + +++ +YG+ G + + +FE + + +V+WNS++S + K G
Sbjct: 170 HCLIILHG--FESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIG 227
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
E+ + L + ++ + +F + + + DL G+ +HGL++K+G + + V +
Sbjct: 228 ATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVES 287
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+LV +Y +C + A K+FK +DVV W +I L +++ KAL ++ +M V P
Sbjct: 288 ALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKP 347
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T + +CA L +G SIH V++ + D+ ++LV YAKC+ L+ + F
Sbjct: 348 STATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIF 407
Query: 301 SEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQLL 358
+++ K++VSWNA++ G+A IF E+ + RP+ T + +L++ A L
Sbjct: 408 NKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALC 467
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
Q G + +VL S + IP ++ + +Y +
Sbjct: 468 Q--------GKWIHNFVLRSSL--------------------IP-CIMTETALVDMYFKC 498
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
G K + + D+V+W+ +I NG + L + + P++ F+S+L
Sbjct: 499 GNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVL 558
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRN 537
SACS ++ G S++ + K +S + ++D+ + G + + + M + +
Sbjct: 559 SACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPS 618
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
++ L+ A +NG + L K + KP
Sbjct: 619 IVVLGMLLDACRVNGRVE--LGKVIARDMFELKP 650
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/555 (23%), Positives = 250/555 (45%), Gaps = 35/555 (6%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+ E + ++NS+VS G + + + ++ L +F + +N
Sbjct: 5 IHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNL 64
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
G +H V+ NG ++ + +SL++ Y + I K+F + R+VV W TIIG+
Sbjct: 65 FSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGS 124
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ + A ++ +M + P T + ++ G+ L +H +I + E D
Sbjct: 125 YSREGDIDIAFSMFKQMRESGIQPTSVTLLSLL---PGISKLPLLLCLHCLIILHGFESD 181
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
+ + +++V+ Y KC + A F I ++IVSWN+L+ Y+ + I L++ +++
Sbjct: 182 LALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKI 241
Query: 337 -GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
+P++ TF L +S L+L G + L
Sbjct: 242 EDIKPDKQTFCSALSASAIKGDLRL--------------------------GKLVHGLML 275
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
LNI + V A ++ +Y R + K+ D+V W +I+ N +
Sbjct: 276 KDGLNIDQHVESALVV--LYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKA 333
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
L +F M + + P T S L+AC++L +G+S+HG + + I+ D N L+
Sbjct: 334 LGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIM-LDIPAQNSLVT 392
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY KC + S IFN+M ++++++W A+++ NG+ + + F EM +PD +
Sbjct: 393 MYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSIT 452
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+ ++L AC G + +G + + RS + P + +VD+ + G+L+ A+K M
Sbjct: 453 VTSLLQACGSAGALCQGKWIHNFVLRS-SLIPCIMTETALVDMYFKCGNLENAQKCFDCM 511
Query: 636 PFPPNALIWRTFLEG 650
+ + W T + G
Sbjct: 512 -LQRDLVAWSTLIVG 525
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 168/533 (31%), Positives = 281/533 (52%), Gaps = 45/533 (8%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV--------------- 207
+HG +I+ F E+ + N L+++Y +C + A K+F + R+V
Sbjct: 46 VHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMRWGF 105
Query: 208 ----------------VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
SWN++I A+ + F +AL+ ++RM D N +F +++
Sbjct: 106 VDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSA 165
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
C+ L++ LG IH + K+ DVF+GS L+DFY+KC + A F + KN+VSW
Sbjct: 166 CSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSW 225
Query: 312 NALILGYASKSSPT--SIFLLIELLQLGYRPNEFTFSHVLRSSLAF----QLLQLHCLII 365
N LI Y ++ P ++ + +LG++P+E T + V+ + + +Q+H ++
Sbjct: 226 NCLITCY-EQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVV 284
Query: 366 RMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
+ + +LG +L+ YAK G +++A + + AV +++G Y ++
Sbjct: 285 KSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSG-YAKSASVKAA 343
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+ + +++ DIVSWN +IA NG+ +E L LF+ ++ + P +YTF +LL+A + L
Sbjct: 344 RSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANL 403
Query: 485 CNLALGSSLHGLIKKTEII-----SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
+L LG H + K D FV N LIDMY KCGS+ +++F M +++ +
Sbjct: 404 ADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHV 463
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W +I NG+ ALE F++M G KPD V +I L AC H GLV EG F M
Sbjct: 464 SWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSM 523
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ +G+ P DHY C+VDLL R G L+EA+ +I +MP P+A++W + L C+
Sbjct: 524 TKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACK 576
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 150/583 (25%), Positives = 255/583 (43%), Gaps = 116/583 (19%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
N +I Y +CGY++ A ++F M R F+F ++S
Sbjct: 63 NRLIDVYGKCGYLDYARKVFDRMSERNV----FSFNSIIS-------------------- 98
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
L+ R G +DE +F MP K +WNS+++ F +H E+ + F
Sbjct: 99 ----------TLM----RWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWF 144
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
+ R + L + SF + S +DL+ G QIHGL+ K+ + ++ + + L++ Y +C
Sbjct: 145 VRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKC 204
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A ++F +E ++VVSWN +I ++ +ALE + RM+ P++ T V+
Sbjct: 205 GLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVV 264
Query: 250 NSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCD----------------- 291
++CA L G IHA+V+K + D+ +G+ALVD YAKC
Sbjct: 265 SACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNA 324
Query: 292 --------------NLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL- 336
+++ A F+ I K+IVSWNALI GY L +L+
Sbjct: 325 VSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRE 384
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
P +TF ++L +S L+L H +++ G+ +SG D
Sbjct: 385 SVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFR-------------FQSGEEPD- 430
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+ N + +Y + G E +++ + D VSWN +I A NG
Sbjct: 431 ------------IFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYG 478
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISS 505
E LELF+ M + PD+ T + L ACS + G + HGL+
Sbjct: 479 MEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLP-----VK 533
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISA 547
D + C ++D+ G+ G + + + M + + + W++L+SA
Sbjct: 534 DHYTC--MVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSA 574
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 139/585 (23%), Positives = 258/585 (44%), Gaps = 115/585 (19%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
MP+++ S+NS+I+ +++ E+AL F+ M F ++FG GL +C L ++ G
Sbjct: 116 MPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLG 175
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
AQ+ + K+ + D F+G+ L+ Y + G + VF+ M K++V+WN +++ + +
Sbjct: 176 AQIHGLISKSK-YSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQ 234
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELL 177
+G + + F + E + V+ + + G QIH V+K + F +L+
Sbjct: 235 NGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLI 294
Query: 178 VANSLVNMYFQC-------------------------------AGIWSAEKMFKDVEIRD 206
+ N+LV+MY +C A + +A MF ++ +D
Sbjct: 295 LGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKD 354
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
+VSWN +I ++ +AL L+ + + V P TF ++N+ A L + LG+ H+
Sbjct: 355 IVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHS 414
Query: 267 KVIKNAL------ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
V+K+ E D+FVG++L+D Y KC ++E F + K+ VSWN +I+GYA
Sbjct: 415 HVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQ 474
Query: 321 KS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
++ L ++L+ G +P+ T ++G+L
Sbjct: 475 NGYGMEALELFQKMLESGEKPDHVT------------------------------MIGTL 504
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPAN----IIAGIYNRTGQYNETVKLLSQL-ERP 434
+ + +GL+ + + ++ ++P + + R G E L+ + ++P
Sbjct: 505 -CACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQP 563
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
D V W+ SLLSAC N+ LG +
Sbjct: 564 DAVVWS-----------------------------------SLLSACKVHRNITLGKYVA 588
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
I + + SS +V +L +MY + G G +V + M R V+
Sbjct: 589 EKIFEIDPTSSGPYV--LLANMYSELGRWGDAVSVRKLMRRRGVV 631
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 170/375 (45%), Gaps = 24/375 (6%)
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
F + + F +++ C L++S +S+H ++I+ +VF+ + L+D Y KC L+ A
Sbjct: 21 FTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARK 80
Query: 299 CFSEISNKNIVSWNALI-----LGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
F +S +N+ S+N++I G+ +S+ L+ E Q + F+ R
Sbjct: 81 VFDRMSERNVFSFNSIISTLMRWGFVDESAWL-FSLMPEKDQCSWNSMIAGFAQHDRFEE 139
Query: 354 AFQLLQLHCLIIRMGYENY---EYVLGSLMTSYAK---SGLISDALAFVTALNIPRAVVP 407
A +RM +++ +Y GS +++ ++ L + ++ V
Sbjct: 140 ALDWF------VRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFM 193
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+ + Y++ G ++ +E ++VSWN +I NG E LE F M
Sbjct: 194 GSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGF 253
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD T S++SAC+ L G +H + K++ +D + N L+DMY KCG + +
Sbjct: 254 KPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEAR 313
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK-PDRVALIAVLTACRHG 586
+F+ M RN ++ T ++S G+A+ A K F K D V+ A++
Sbjct: 314 CVFDRMPVRNAVSETTMVS-----GYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQN 368
Query: 587 GLVREGMELFERMNR 601
G E + LF + R
Sbjct: 369 GENEEALGLFRMLKR 383
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 294/624 (47%), Gaps = 82/624 (13%)
Query: 81 LLGLYGRHGCLDEVVSVFEDMPRKS--LVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVA 138
L+ Y GCL VS+ P + WNS++ +G +G C+ FC +
Sbjct: 65 LISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWT 124
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
+F V + G+ H L GF + V N+LV MY +C + A K+
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKV 184
Query: 199 FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF-PNQTTFVYVINSCAGLQN 257
F ++ + DVVSWN+II + A+ ALE++ +M+ + F P+ T V V+ CA +
Sbjct: 185 FDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGT 244
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
LGK H + + + ++FVG+ LVD YAK ++ A+ FS + K++VSWNA++ G
Sbjct: 245 RSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAG 304
Query: 318 YASKSSPTSIFLLIELLQ----------------------LGY--------------RPN 341
Y+ L E +Q LGY +PN
Sbjct: 305 YSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 342 EFTFSHVLRSSLAFQLL----QLHCLIIRM-------GYENYEYVLGSLMTSYAKSGLIS 390
E T VL + L ++HC I+ G+ + V+ L+ YAK
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAK----- 419
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
++I RA+ + LS ER D+V+W ++I + +G
Sbjct: 420 -----CKKVDIARAMFDS-------------------LSPKER-DVVTWTVMIGGYSQHG 454
Query: 451 DYKEVLELFKYM--RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
D + LEL M + P+ +T L AC+ L L++G +H + + + F
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLF 514
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V N LIDMY KCG IG + +F+ M ++N +TWT+L++ G++G+ + AL F EM +G
Sbjct: 515 VSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIG 574
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
FK D V L+ VL AC H G++ +GME F RM +GV P +HY C+VDLL R G L A
Sbjct: 575 FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAA 634
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
++I MP P ++W L C+
Sbjct: 635 LRLIEEMPMEPPPVVWVALLSCCR 658
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 147/620 (23%), Positives = 264/620 (42%), Gaps = 90/620 (14%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQL 61
D V +NS+I +Y G L F M + + P +TF + +C ++ V
Sbjct: 89 DAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDS 148
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
++ + F ++ FVG AL+ +Y R G L + VF++MP +V+WNSI+ + K G
Sbjct: 149 SHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGK 208
Query: 122 VEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + +F ++ + + V V+ ++ G+Q HG + + + V N
Sbjct: 209 PKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGN 268
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS-----V 235
LV+MY + + A +F ++ ++DVVSWN ++ ++ F A+ L+ +M +
Sbjct: 269 CLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKM 328
Query: 236 DIVF------------------------------PNQTTFVYVINSCAGLQNSILGKSIH 265
D+V PN+ T + V++ CA + + GK IH
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 266 AKVIKNALEC-------DVFVGSALVDFYAKCDNLEGAHLCFSEISNK--NIVSWNALIL 316
IK ++ + V + L+D YAKC ++ A F +S K ++V+W +I
Sbjct: 389 CYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIG 448
Query: 317 GYASKSSPT-SIFLLIELLQ--LGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGY 369
GY+ ++ LL E+ + RPN FT S L + + L Q+H +R
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQ 508
Query: 370 ENYE-YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
+V L+ YAK G I DA +++ + NE
Sbjct: 509 NAVPLFVSNCLIDMYAKCGDIGDARL-------------------VFDNMMEKNE----- 544
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
V+W ++ +G +E L +F+ MR D T + +L ACS +
Sbjct: 545 --------VTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMID 596
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISA 547
G +K +S L+D+ G+ G + +++++ EM + + W AL+S
Sbjct: 597 QGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSC 656
Query: 548 LGLNG---FAQRALEKFREM 564
++G + A +K E+
Sbjct: 657 CRIHGKVELGEYAAKKITEL 676
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/506 (26%), Positives = 224/506 (44%), Gaps = 88/506 (17%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLLS-CDSLNPVE- 57
MP +VVS+NSII +Y++ G + AL MF M N GF P T +L C S+
Sbjct: 188 MPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSL 247
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q + + + + FVG L+ +Y + G +DE +VF +MP K +V+WN++V+ +
Sbjct: 248 GKQFHGFAVTSEMI-QNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYS 306
Query: 118 KHGFVEDCMFLF----------------------------------C-ELVRSEVALTES 142
+ G ED + LF C +++ S + E
Sbjct: 307 QIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEV 366
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVI-------KNGFDYELLVANSLVNMYFQCAGIWSA 195
+ + V+ G ++ L G++IH I KNG E +V N L++MY +C + A
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIA 426
Query: 196 EKMFKDV--EIRDVVSWNTIIGALAESENFGKALELYLRMSVD--IVFPNQTTFVYVINS 251
MF + + RDVV+W +IG ++ + KALEL M + PN T + +
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVA 486
Query: 252 CAGLQNSILGKSIHAKVIKNALEC-DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
CA L +GK IHA ++N +FV + L+D YAKC ++ A L F + KN V+
Sbjct: 487 CASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVT 546
Query: 311 WNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGY 369
W +L+ GY ++ + E+ ++G++ + T VL +
Sbjct: 547 WTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYAC----------------- 589
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN----IIAGIYNRTGQYNETV 425
+ SG+I + + + V P + + R G+ N +
Sbjct: 590 --------------SHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAAL 635
Query: 426 KLLSQLE-RPDIVSWNIVIAACAHNG 450
+L+ ++ P V W +++ C +G
Sbjct: 636 RLIEEMPMEPPPVVWVALLSCCRIHG 661
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M ++N V++ S+++ Y GY E+AL +F M GF+ T +L +C ++
Sbjct: 539 MMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598
Query: 60 QLQASVLKNGLFCADAFVGTA-LLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
+ +K + A L+ L GR G L+ + + E+MP V W +++S
Sbjct: 599 MEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCR 658
Query: 118 KHGFVE 123
HG VE
Sbjct: 659 IHGKVE 664
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/505 (34%), Positives = 276/505 (54%), Gaps = 16/505 (3%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI-RDVVSWNTIIGALAE 219
++H L+I G + ++ + L+ Y S+ +F+ +V WN+II AL
Sbjct: 33 HKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTH 92
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ F +AL LY + P+ TF VIN+CAGL + + KSIH +V+ D+++
Sbjct: 93 NGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYI 152
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY--------ASKSSPTSIFLLI 331
G+AL+D Y + ++L+ A F E+ +++VSWN+LI GY A + SI L +
Sbjct: 153 GNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFM 212
Query: 332 ELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSG 387
E++ ++P+ T + +L++ L+ +H +I GYE L+ YAK G
Sbjct: 213 EMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCG 271
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
+ + + + +V N + +Y + G+ +++K+ ++ DI++WN +IA+C
Sbjct: 272 NLLASQEVFSGMKCKDSV-SWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCV 330
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
H+ D L + MR + PD T +S+L CS L G +HG I K + SD
Sbjct: 331 HSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGL-ESDV 389
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
V N+LI+MY KCGS+ +S ++F M ++V+TWTALISA G+ G ++A+ F EME
Sbjct: 390 PVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAA 449
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G PD VA +A++ AC H GLV EG+ F RM + Y +EP ++HY CVVDLL R L +
Sbjct: 450 GIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDK 509
Query: 628 AEKIITTMPFPPNALIWRTFLEGCQ 652
AE I +MP P++ IW L C+
Sbjct: 510 AEDFILSMPLKPDSSIWGALLSACR 534
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 125/525 (23%), Positives = 235/525 (44%), Gaps = 83/525 (15%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ 60
P NV +NSII A + G +AL ++ +P +TF ++ +C L E A+
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 61 -LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ VL G F +D ++G AL+ +Y R LD+ VFE+MP + +V+WNS++S + +
Sbjct: 136 SIHDRVLDMG-FGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194
Query: 120 GFVEDCMFLFCELVRSEVALTES------SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
G+ + + ++ + ++ + + + ++ + DLEFG+ +H +I +G++
Sbjct: 195 GYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYE 254
Query: 174 YELLVANSLVNMYFQCAGIWSAE-------------------------------KMFKDV 202
+ +N L+NMY +C + +++ K+F+++
Sbjct: 255 CDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENM 314
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
+ RD+++WNTII + SE+ L + RM + V P+ T + ++ C+ L GK
Sbjct: 315 KARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGK 374
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG---YA 319
IH + K LE DV VG+ L++ Y+KC +L + F + K++V+W ALI Y
Sbjct: 375 EIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYG 434
Query: 320 SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
F E + ++ +AF + C
Sbjct: 435 EGKKAVRAF------------GEMEAAGIVPDHVAFVAIIFAC----------------- 465
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVK-LLSQLERP 434
+ SGL+ + L + + + P + + +R+ ++ +LS +P
Sbjct: 466 ----SHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKP 521
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
D W +++AC +GD E+ E R + PD+ + L+S
Sbjct: 522 DSSIWGALLSACRMSGD-TEIAERVSE-RIIELNPDDTGYYVLVS 564
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 232/482 (48%), Gaps = 24/482 (4%)
Query: 102 PRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGE 161
P ++ WNSI+ +G + + L+ E R + +F VI+ + D E +
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
IH V+ GF +L + N+L++MY + + A K+F+++ +RDVVSWN++I +
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195
Query: 222 NFGKALELY---LRMSVDIV---FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+ +ALE+Y +++ +++V P+ T ++ +C L + GK +H +I + EC
Sbjct: 196 YWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYEC 255
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
D + L++ YAKC NL + FS + K+ VSWN++I Y + E ++
Sbjct: 256 DTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMK 315
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQLHC-LIIRMGYENYEYVLGSLMTSYAKSGLIS---- 390
+ T++ ++ S + + L +I RM E + ++++ L++
Sbjct: 316 A---RDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQ 372
Query: 391 --DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
+ + L + V N++ +Y++ G + ++ ++ D+V+W +I+AC
Sbjct: 373 GKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGM 432
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--D 506
G+ K+ + F M AA I PD+ FV+++ ACS + G + +KK I +
Sbjct: 433 YGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIE 492
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNG---FAQRALEKFR 562
+ C ++D+ + + + M + + W AL+SA ++G A+R E+
Sbjct: 493 HYAC--VVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERII 550
Query: 563 EM 564
E+
Sbjct: 551 EL 552
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 39/286 (13%)
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
QL +LH LII +G + L+ YA D ++ ++ R P+N
Sbjct: 31 QLHKLHSLIITLGLHHSVIFSAKLIAKYAH---FRDP---TSSFSVFRLASPSN------ 78
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
++ WN +I A HNG + E L L+ + R+ PD YTF
Sbjct: 79 -------------------NVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFP 119
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+++AC+ L + + S+H + SD ++ N LIDMY + + + K+F EM
Sbjct: 120 SVINACAGLLDFEMAKSIHDRVLDMG-FGSDLYIGNALIDMYCRFNDLDKARKVFEEMPL 178
Query: 536 RNVITWTALISALGLNGFAQRALEKFRE-----MEFLG-FKPDRVALIAVLTACRHGGLV 589
R+V++W +LIS NG+ ALE + + ME + FKPD + + ++L AC H G +
Sbjct: 179 RDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDL 238
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
G + + M S G E + + ++++ + G+L ++++ + M
Sbjct: 239 EFGKYVHDYMITS-GYECDTTASNILINMYAKCGNLLASQEVFSGM 283
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 136/293 (46%), Gaps = 42/293 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDAL-------RMFLYMINRGFEPTQFTFGGLL-SCDS 52
MP R+VVS+NS+IS Y+ GY +AL ++F+ M+N+ F+P T +L +C
Sbjct: 176 MPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQ-FKPDLLTITSILQACGH 234
Query: 53 LNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNS 111
L +E G + ++ +G C D L+ +Y + G L VF M K V+WNS
Sbjct: 235 LGDLEFGKYVHDYMITSGYEC-DTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNS 293
Query: 112 IVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF------------ 159
+++++ ++G + D + +F + ++ + +H L
Sbjct: 294 MINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPD 353
Query: 160 -------------------GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
G++IHG + K G + ++ V N L+ MY +C + ++ ++FK
Sbjct: 354 MATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFK 413
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
++ +DVV+W +I A KA+ + M + P+ FV +I +C+
Sbjct: 414 LMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACS 466
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 131/290 (45%), Gaps = 24/290 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVED---ALRMFLYMINRGFEPTQFTFGGLLSCDSL--NP 55
M R+++++N+II++ C + ED LRM M G P T +L SL
Sbjct: 314 MKARDIITWNTIIAS---CVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAK 370
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
+G ++ + K GL +D VG L+ +Y + G L VF+ M K +VTW +++S
Sbjct: 371 RQGKEIHGCIFKLGLE-SDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISA 429
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG-EQIHGLVIKNGFDY 174
G +G + + F E+ + + +FV +I S+ +E G H + K +
Sbjct: 430 CGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRM--KKDYKI 487
Query: 175 ELLVAN--SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
E + + +V++ + A + AE + ++ S I GAL + E+ R
Sbjct: 488 EPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSS---IWGALLSACRMSGDTEIAER 544
Query: 233 MSVDIV--FPNQTT-FVYVINSCAGL----QNSILGKSIHAKVIKNALEC 275
+S I+ P+ T +V V N A L Q + KSI A+ +K C
Sbjct: 545 VSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGC 594
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 190/663 (28%), Positives = 333/663 (50%), Gaps = 47/663 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM---INRGFEPTQFTFGGLLSCDSL--NP 55
M R V S+N++I AY G +AL ++ M G P T +L + +
Sbjct: 121 MSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDG 180
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-KSLVTWNSIVS 114
G ++ +K+GL FV AL+ +Y + G LD + VFE M + + +WNS++S
Sbjct: 181 RCGCEVHGLAVKHGLD-RSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMIS 239
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
++G + LF + R+ +++ + VGV+ + L G ++H ++K+G +
Sbjct: 240 GCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEV 299
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ N+L+ MY +C + SA ++F++++ +D +SWN+++ ++ + +A+E M
Sbjct: 300 NIQ-CNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEML 358
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
P+ V + ++ L + GK +HA IK L+ D VG+ L+D Y KC +E
Sbjct: 359 RGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIE 418
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
+ F + K+ +SW +I YA S ++ + E + G + + +L +
Sbjct: 419 YSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACS 478
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ + QLHC IR +GL+ +V N
Sbjct: 479 GLETILLAKQLHCYAIR-------------------NGLLD--------------LVVKN 505
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
I IY G+ ++K+ +E+ DIV+W +I A++G E L LF M++ + P
Sbjct: 506 RIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQP 565
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D+ VS+L A L +LA G +HG + + + V + L+DMY CGS+ ++K+
Sbjct: 566 DSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSS-LVDMYSGCGSLSGALKV 624
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
FN + ++++ WTA+I+A G++G ++A++ F+ M G PD V+ +A+L AC H LV
Sbjct: 625 FNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLV 684
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG + M +Y +EP +HY CVVDLL R G +EA + I +MP P +++W + L
Sbjct: 685 NEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLG 744
Query: 650 GCQ 652
C+
Sbjct: 745 ACR 747
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 158/577 (27%), Positives = 279/577 (48%), Gaps = 42/577 (7%)
Query: 20 GYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGAQLQASVLKNG-LFCADAF 76
G + ALR+ L G P Q +G +L + +G Q+ A + G L D F
Sbjct: 38 GNLRQALRL-LTSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGF 96
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL---V 133
+ T LL +YG+ G + + +F+ M +++ +WN+++ + G + + ++ +
Sbjct: 97 LATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSA 156
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
S VA + V+ E D G ++HGL +K+G D VAN+L+ MY +C +
Sbjct: 157 ASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILD 216
Query: 194 SAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
SA ++F+ + + RDV SWN++I ++ F +AL+L+ M ++ N T V V+ C
Sbjct: 217 SAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVC 276
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
L LG+ +HA ++K+ E ++ + LV Y KC ++ A F EI K+ +SWN
Sbjct: 277 TELAQLNLGRELHAALLKSGSEVNIQCNALLV-MYTKCGRVDSALRVFREIDEKDYISWN 335
Query: 313 ALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYEN 371
+++ Y +I + E+L+ G++P+ H SL+ + L L+ G E
Sbjct: 336 SMLSCYVQNGLYAEAIEFISEMLRGGFQPD-----HACIVSLSSAVGHLGWLL--NGKEV 388
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
+ Y + + S + G N + +Y + + + ++
Sbjct: 389 HAYAIKQRLDSDTQVG---------------------NTLMDMYMKCRYIEYSAHVFDRM 427
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
D +SW +I A + + E LE+F+ + I D S+L ACS L + L
Sbjct: 428 RIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAK 487
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
LH + ++ D V N +ID+YG+CG + S+K+F + ++++TWT++I+ +
Sbjct: 488 QLHCYAIRNGLL--DLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANS 545
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
G AL F EM+ +PD VAL+++L A GGL
Sbjct: 546 GLLNEALVLFAEMQSTDVQPDSVALVSILGAI--GGL 580
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/620 (29%), Positives = 319/620 (51%), Gaps = 19/620 (3%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCA------DAFVGTALLGLYGRHGCLDEVVSVF-- 98
L++C +L ++ QL ++K GL C + + +++ G LD + F
Sbjct: 32 LVNCKTLKELK--QLHCDMMKKGLLCHKPASNLNKLIASSVQ--IGTLESLDYARNAFGD 87
Query: 99 EDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLE 158
+D SL +N ++ + G + + L+ +++ + + +F ++ S L
Sbjct: 88 DDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALS 147
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
G Q+HG V+K G + ++ V+NSL++ Y +C + K+F + R+VVSW ++I +
Sbjct: 148 EGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYS 207
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ +A+ L+ +M V PN T V VI++CA L++ LGK + + + + +E
Sbjct: 208 GRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTI 267
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLG 337
+ +ALVD Y KC ++ A F E +NKN+V +N ++ Y + + +++ E+LQ G
Sbjct: 268 MVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKG 327
Query: 338 YRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
RP++ T + + L + H ++R G E ++ + +++ Y K G A
Sbjct: 328 PRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAAC 387
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
+ V ++IAG+ R G ++ ++ D+VSWN +I A ++
Sbjct: 388 KVFEHMPNKTVVTWNSLIAGLV-RDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFE 446
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
E +ELF+ M+ I D T V + SAC L L L + I+K +I D + L
Sbjct: 447 EAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDI-HVDLQLGTAL 505
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+DM+ +CG S++ +F M R+V WTA I + + G + A+E F EM KPD
Sbjct: 506 VDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDD 565
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
V +A+LTAC HGG V +G +LF M +++G+ P + HY C+VDLL R G L+EA +I
Sbjct: 566 VVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQ 625
Query: 634 TMPFPPNALIWRTFLEGCQR 653
+MP PN ++W + L C++
Sbjct: 626 SMPIEPNDVVWGSLLAACRK 645
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 154/610 (25%), Positives = 285/610 (46%), Gaps = 55/610 (9%)
Query: 3 DRNVVS---FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVE 57
D N+ S +N +I Y+ G + A+ +++ M+ G P ++TF LLS S L E
Sbjct: 89 DGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSE 148
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ +VLK GL D FV +L+ Y G +D +F+ M +++V+W S+++ +
Sbjct: 149 GVQVHGAVLKMGLE-GDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYS 207
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ + LF ++ + V + V VI + +DLE G+++ + + G + +
Sbjct: 208 GRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTI 267
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ N+LV+MY +C I +A ++F + +++V +NTI+ E L + M
Sbjct: 268 MVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKG 327
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P++ T + I +CA L + +GKS HA V++N LE + +A++D Y KC E A
Sbjct: 328 PRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAAC 387
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + NK +V+WN+LI G ++L +R F +L L
Sbjct: 388 KVFEHMPNKTVVTWNSLIAGLVRDGD----------MELAWR----IFDEMLERDLVSWN 433
Query: 358 LQLHCLI-IRMGYENYEY--------VLGSLMTSYAKSGLISDALAFVTALNIPRAVVP- 407
+ L+ + M E E + G +T I+ A ++ AL++ + V
Sbjct: 434 TMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVG----IASACGYLGALDLAKWVCTY 489
Query: 408 ------------ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
+ +++R G + + + ++E+ D+ +W I A G+ +
Sbjct: 490 IEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGA 549
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
+ELF M ++ PD+ FV+LL+ACS ++ G L ++K I ++D
Sbjct: 550 IELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVD 609
Query: 516 MYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFKP 571
+ G+ G + +V + M + N + W +L++A + A A EK ++ P
Sbjct: 610 LLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQL-----AP 664
Query: 572 DRVALIAVLT 581
+RV + +L+
Sbjct: 665 ERVGIHVLLS 674
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 222/453 (49%), Gaps = 41/453 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M +RNVVS+ S+I+ YS ++A+ +F M G EP T ++S C L +E G
Sbjct: 191 MLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELG 250
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ + + + G+ + V AL+ +Y + G + +F++ K+LV +N+I+S +
Sbjct: 251 KKVCSYISELGMELSTIMV-NALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVH 309
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
H + D + + E+++ + + + I + DL G+ H V++NG + +
Sbjct: 310 HEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNI 369
Query: 179 ANSLVNMYFQCAGIWSAEKMFK---------------------DVEI----------RDV 207
+N++++MY +C +A K+F+ D+E+ RD+
Sbjct: 370 SNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDL 429
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
VSWNT+IGAL + F +A+EL+ M + ++ T V + ++C L L K +
Sbjct: 430 VSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTY 489
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTS 326
+ KN + D+ +G+ALVD +++C + A F + +++ +W A I A + ++ +
Sbjct: 490 IEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGA 549
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRS-SLAFQLLQLHCLIIRM----GYENYEYVLGSLMT 381
I L E+L+ +P++ F +L + S + Q L M G + G ++
Sbjct: 550 IELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVD 609
Query: 382 SYAKSGLISDALAFVTALNI-PRAVVPANIIAG 413
++GL+ +A+ + ++ I P VV +++A
Sbjct: 610 LLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAA 642
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 111/226 (49%), Gaps = 5/226 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M +R++VS+N++I A + E+A+ +F M N+G + T G+ S C L ++ A
Sbjct: 424 MLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLA 483
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + ++ D +GTAL+ ++ R G + VF+ M ++ + W + + +
Sbjct: 484 KWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAME 543
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELLV 178
G E + LF E++ +V + FV ++ S+ ++ G Q+ + K +G ++
Sbjct: 544 GNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVH 603
Query: 179 ANSLVNMYFQCAGIWSAEKMFKD--VEIRDVVSWNTIIGALAESEN 222
+V++ + + A + + +E DVV W +++ A + +N
Sbjct: 604 YGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVV-WGSLLAACRKHKN 648
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 184/624 (29%), Positives = 316/624 (50%), Gaps = 33/624 (5%)
Query: 32 MINRGFEPTQFTFGGLLSC-DSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
M+ G P ++TF ++ C LN V G +Q +L+ G F D FV ++L+ LY +G
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMG-FDLDMFVASSLIKLYADNG 59
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH 149
C+++ F+ M K V WN +++ + + G + + LF +++ SE +F V+
Sbjct: 60 CIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLS 119
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
+E +E+G Q+HGLV+++G D+ LV N+LV +Y + + A K+F + D+V
Sbjct: 120 ISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVV 179
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
WN +IG ++ A L+ M + P+ TF + S A + K IH ++
Sbjct: 180 WNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIV 239
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIF 328
++ + DV++ SAL+D Y KC + A F+ + +IV + A+I GY + + ++
Sbjct: 240 RHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALE 299
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
+ LLQ PN TFS +L + I++G E + Y++ + + G
Sbjct: 300 IFRWLLQKKMIPNALTFSSILPACAGLA-------AIKLGRELHGYIIKNELEEKCPVG- 351
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
+ I +Y + G+ + + ++ D + WN +I + +
Sbjct: 352 --------------------SAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQ 391
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
+G +E + LF+ M + D T + LSAC+ + L G +HG + K SD F
Sbjct: 392 DGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAF-ESDLF 450
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+ LI+MY KCG + + +FN M ++N + W ++I+A G +G+ +L F M G
Sbjct: 451 DMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEG 510
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
+PD + + +L++C H G V +G+ F M YG+ +M+HY C+ DL R GHL EA
Sbjct: 511 IQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEA 570
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
++IT+MPFPP A +W T L C+
Sbjct: 571 FEVITSMPFPPAASVWGTLLGACR 594
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 151/565 (26%), Positives = 274/565 (48%), Gaps = 41/565 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
M D++ V +N +I+ Y +CG + A+++F M++ +P TF +LS C G
Sbjct: 71 MIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYG 130
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL V+++GL VG L+ +Y + L + +F+ MP+ LV WN ++ + +
Sbjct: 131 RQLHGLVVRSGLDFV-PLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQ 189
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF++D LF E++ + + +F + L+ L+ ++IHG ++++G ++ +
Sbjct: 190 NGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYL 249
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++L+++YF+C A KMF D+V + +I + ALE++ + +
Sbjct: 250 NSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKM 309
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN TF ++ +CAGL LG+ +H +IKN LE VGSA+++ YAKC L+ AHL
Sbjct: 310 IPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHL 369
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F IS K+ + WN++I ++ P +I+L ++ G + + T S L +
Sbjct: 370 IFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPA 429
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L ++H +I+ +E+ + + +L+ YAK G LNI R V
Sbjct: 430 LHYGKEIHGFMIKGAFESDLFDMSALINMYAKCG----------KLNIARLV-------- 471
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+N + NE V+WN +IAA ++G + L LF M I PD+ T
Sbjct: 472 -FNLMQEKNE-------------VAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHIT 517
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F+++LS+C + G + + I + + D++G+ G + + ++ M
Sbjct: 518 FLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSM 577
Query: 534 T-DRNVITWTALISALGLNGFAQRA 557
W L+ A ++G + A
Sbjct: 578 PFPPAASVWGTLLGACRVHGNVELA 602
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 184/597 (30%), Positives = 304/597 (50%), Gaps = 32/597 (5%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G ++ + ++ NG+ D +G L+ +Y G L + +F+ + + WN ++S +
Sbjct: 112 DGKRVHSVIISNGI-SVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEY 170
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
K G + + LF ++ + V +F V+ + ++ +++HG V+K GF
Sbjct: 171 AKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNT 230
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V NSL+ YF+ G+ SA +F ++ DVVSWN++I + G LE++++M +
Sbjct: 231 AVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLIL 290
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V + TT V V+ +CA + N LG+++H +K +V + L+D Y+KC NL GA
Sbjct: 291 GVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGA 350
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F ++ + IVSW ++I Y + +I L E+ G RP+ +T + ++ +
Sbjct: 351 TEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACS 410
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L G + + YV+ + M S N+P N + +Y
Sbjct: 411 SSLD-------KGRDVHSYVIKNGMGS-----------------NLP----VTNALINMY 442
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G E + S++ DIVSWN +I + N E LELF M+ + PD+ T
Sbjct: 443 AKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMA 501
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
+L AC+ L L G +HG I + S D V L+DMY KCG + + +F+ +
Sbjct: 502 CVLPACAGLAALDKGREIHGHILRRGYFS-DLHVACALVDMYAKCGLLVLAQLLFDMIPK 560
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+++I+WT +I+ G++GF A+ F EM G +PD + A+L AC H GL+ EG +
Sbjct: 561 KDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKF 620
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M GVEP+++HY CVVDLL R G+L +A K I +MP P+ IW L GC+
Sbjct: 621 FNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCR 677
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 153/593 (25%), Positives = 287/593 (48%), Gaps = 53/593 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPV-EG 58
M D+ V +N ++S Y++ G +++ +F M G +TF +L C +L V E
Sbjct: 156 MNDK-VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC 214
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ VLK G F ++ V +L+ Y + G ++ ++F+++ +V+WNS+++
Sbjct: 215 KRVHGYVLKLG-FGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVV 273
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF + + +F +++ V + ++ V V+ +N +L G +HG +K F E++
Sbjct: 274 NGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVF 333
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N+L++MY +C + A ++F + +VSW +II A + A+ L+ M V
Sbjct: 334 SNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGV 393
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T ++++CA + G+ +H+ VIKN + ++ V +AL++ YAKC ++E A L
Sbjct: 394 RPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARL 453
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
FS+I K+IVSWN +I GY+ P L +Q ++P++ T + VL + L
Sbjct: 454 VFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFKPDDITMACVLPACAGLAAL 513
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
++H I+R GY + +V +L+ YAK GL+ ++A +
Sbjct: 514 DKGREIHGHILRRGYFSDLHVACALVDMYAKCGLL--------------------VLAQL 553
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
L + + D++SW ++IA +G E + F MR A I PD +F
Sbjct: 554 ------------LFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSF 601
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNE 532
++L+ACS L G ++ + + + C ++D+ + G++ + K
Sbjct: 602 SAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYAC--VVDLLARMGNLSKAYKFIES 659
Query: 533 MTDR-NVITWTALISALGLN---GFAQRALEKFREMEFLGFKPDRVALIAVLT 581
M + + W L+S ++ A++ E E+E PD VL
Sbjct: 660 MPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELE-----PDNTRYYVVLA 707
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 145/520 (27%), Positives = 241/520 (46%), Gaps = 23/520 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
+ + +VVS+NS+I+ G+ + L +F+ M+ G E T L++C ++ + G
Sbjct: 256 LSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLG 315
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L +K F + LL +Y + G L+ VF M ++V+W SI++ + +
Sbjct: 316 RALHGFGVK-ACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVR 374
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G D + LF E+ V + ++H + L+ G +H VIKNG L V
Sbjct: 375 EGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPV 434
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+NMY +C + A +F + ++D+VSWNT+IG +++ +ALEL+L M
Sbjct: 435 TNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFK 494
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T V+ +CAGL G+ IH +++ D+ V ALVD YAKC L A L
Sbjct: 495 -PDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQL 553
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F I K+++SW +I GY +I E+ G P+E +FS +L + L
Sbjct: 554 LFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGL 613
Query: 358 LQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L + + G E ++ A+ G +S A F+ ++ I P I
Sbjct: 614 LNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIK----PDTTIW 669
Query: 413 GIYNRTGQYNETVKLLSQLE------RPDIVSWNIVIAAC-AHNGDYKEVLELFKYMRAA 465
G+ + + VKL ++ PD + +V+A A ++EV +L K M+
Sbjct: 670 GVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQ-K 728
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
R + N S + K G+S H KK +++ S
Sbjct: 729 RGFKQN-PGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLS 767
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 139/543 (25%), Positives = 250/543 (46%), Gaps = 37/543 (6%)
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
N+ ++ F + G + + + L + E+ L +S+ V+ + ++ LE G+++H ++I
Sbjct: 65 NAKINKFCEMGDLRNAIELLTKSKSYELGL--NSYCSVLQLCAEKKSLEDGKRVHSVIIS 122
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
NG + + LV MY C + K+F + V WN ++ A+ NF +++ L
Sbjct: 123 NGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 182
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
+ +M V N TF V+ A L K +H V+K + V ++L+ Y K
Sbjct: 183 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFK 242
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHV 348
+E AH F E+S ++VSWN++I G S + + I++L LG + T V
Sbjct: 243 FGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSV 302
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
L + L LG + + S+ + F +
Sbjct: 303 LVACANIGNLS----------------LGRALHGFGVKACFSEEVVF------------S 334
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N + +Y++ G N ++ ++ IVSW +IAA G Y + + LF M++ +
Sbjct: 335 NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVR 394
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD YT S++ AC+ +L G +H + K + S+ V N LI+MY KCGS+ +
Sbjct: 395 PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNG-MGSNLPVTNALINMYAKCGSVEEARL 453
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F+++ +++++W +I N ALE F +M+ FKPD + + VL AC
Sbjct: 454 VFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAA 512
Query: 589 VREGMELFERMNRSYGVEPEMDHYHC-VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
+ +G E+ + R G ++ H C +VD+ + G L A+ + +P + + W
Sbjct: 513 LDKGREIHGHILRR-GYFSDL-HVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWTVM 569
Query: 648 LEG 650
+ G
Sbjct: 570 IAG 572
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/597 (29%), Positives = 305/597 (51%), Gaps = 40/597 (6%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM-PRKSLVTWNSIVSIF 116
GAQ+ A + G F +D FV AL+ +YG G +D+ VF++ ++ V+WN ++S +
Sbjct: 26 GAQVHAMAMATG-FGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAY 84
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
K+ D + +F E+V S + TE F V++ + ++++ G Q+H +V++ G++ ++
Sbjct: 85 VKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDV 144
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
AN+LV+MY + + A +F+ + DVVSWN +I + + +A+EL L+M
Sbjct: 145 FTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSS 204
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ PN ++ +CAG LG+ IH +IK + D ++G LVD YAK L+ A
Sbjct: 205 GLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA 264
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF 355
F +S+++++ WNALI G + F + L + G N T + VL+S+ +
Sbjct: 265 MKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASL 324
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ Q+H L ++G+ +V+ L+ SY K +SDA
Sbjct: 325 EAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDA------------------- 365
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+++ + DI++ +I A + + ++LF M + PD
Sbjct: 366 -------------IRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 412
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ SLL+AC+ L G +H + K + +S D F N L+ Y KCGSI + F+
Sbjct: 413 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS-DAFAGNALVYTYAKCGSIEDAELAFS 471
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ +R V++W+A+I L +G +RALE F M G P+ + + +VL AC H GLV E
Sbjct: 472 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 531
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
F M +G++ +HY C++DLL R G L +A +++ +MPF NA +W L
Sbjct: 532 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALL 588
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 242/501 (48%), Gaps = 41/501 (8%)
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTII 214
D + G Q+H + + GF ++ VAN+LV MY + A ++F + R+ VSWN ++
Sbjct: 22 DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 81
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
A +++ G A++++ M + P + F V+N+C G +N G+ +HA V++ E
Sbjct: 82 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE 141
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIEL 333
DVF +ALVD Y K ++ A + F ++ + ++VSWNALI G + +I LL+++
Sbjct: 142 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 201
Query: 334 LQLGYRPNEFTFSHVLRS---SLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
G PN F S +L++ + AF L Q+H +I+ ++ +Y+ L+ YAK+ +
Sbjct: 202 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 261
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
DA+ K+ + D++ WN +I+ C+H
Sbjct: 262 DDAM--------------------------------KVFDWMSHRDLILWNALISGCSHG 289
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
G + E +F +R + + T ++L + + L + +H L +K I D V
Sbjct: 290 GRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFI-FDAHV 348
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
N LID Y KC + ++++F E + ++I T++I+AL + A++ F EM G
Sbjct: 349 VNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGL 408
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
+PD L ++L AC +G ++ + + + + +V + G +++AE
Sbjct: 409 EPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAE 467
Query: 630 KIITTMPFPPNALIWRTFLEG 650
+++P + W + G
Sbjct: 468 LAFSSLP-ERGVVSWSAMIGG 487
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 145/554 (26%), Positives = 253/554 (45%), Gaps = 43/554 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQ 60
+RN VS+N ++SAY + DA+++F M+ G +PT+F F +++ S N G Q
Sbjct: 71 ERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQ 130
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ A V++ G + D F AL+ +Y + G +D +FE MP +V+WN+++S +G
Sbjct: 131 VHAMVVRMG-YEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNG 189
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ L ++ S + ++ + + G QIHG +IK D + +
Sbjct: 190 HDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGV 249
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
LV+MY + + A K+F + RD++ WN +I + +A ++ + + +
Sbjct: 250 GLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGV 309
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N+TT V+ S A L+ + + +HA K D V + L+D Y KC L A F
Sbjct: 310 NRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVF 369
Query: 301 SEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF---- 355
E S+ +I++ ++I + +I L +E+L+ G P+ F S +L + +
Sbjct: 370 EECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYE 429
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIAGI 414
Q Q+H +I+ + + + +L+ +YAK G I DA LAF
Sbjct: 430 QGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF------------------- 470
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
S L +VSW+ +I A +G K LELF M I P++ T
Sbjct: 471 --------------SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITM 516
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S+L AC+ + +K+ I + +ID+ G+ G + ++++ N M
Sbjct: 517 TSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMP 576
Query: 535 -DRNVITWTALISA 547
N W AL+ A
Sbjct: 577 FQANASVWGALLGA 590
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/537 (23%), Positives = 261/537 (48%), Gaps = 24/537 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MPD +VVS+N++IS G+ A+ + L M + G P F +L +C + G
Sbjct: 170 MPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG 229
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ ++K +D ++G L+ +Y ++ LD+ + VF+ M + L+ WN+++S
Sbjct: 230 RQIHGFMIKANAD-SDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSH 288
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ +F L + + + ++ V+ ++ + Q+H L K GF ++ V
Sbjct: 289 GGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHV 348
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N L++ Y++C+ + A ++F++ D+++ ++I AL++ ++ A++L++ M +
Sbjct: 349 VNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGL 408
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ ++N+CA L GK +HA +IK D F G+ALV YAKC ++E A L
Sbjct: 409 EPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAEL 468
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----RSSL 353
FS + + +VSW+A+I G A ++ L ++ G PN T + VL + L
Sbjct: 469 AFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGL 528
Query: 354 AFQLLQLHCLIIRM-GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ + + M G + E ++ ++G + DA+ V ++ +
Sbjct: 529 VDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALL 588
Query: 413 GIYNRTGQYNETVKLLSQ---LERPDIVSWNIVIAAC-AHNGDYKEVLELFKYMRAARIY 468
G +R + E KL ++ + P+ ++++A A +G + EV ++ K M+ + I
Sbjct: 589 GA-SRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIK 647
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKT--------EIISSDTFVCNMLIDMY 517
+ +S + K+ +G H + K+ +++S ++ N+ +D++
Sbjct: 648 KE--PAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLH 702
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 197/630 (31%), Positives = 316/630 (50%), Gaps = 46/630 (7%)
Query: 32 MINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
M+ RG + TF +L DS + +G ++ V K G F D +VG LL LYG G
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLG-FDTDVYVGNTLLMLYGNCG 59
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG-FVEDCMFLFCELVRSEVALTESSFVGVI 148
L++ +F++MP + +V+WN+I+ + +G + E + F ++RS + S + ++
Sbjct: 60 FLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLL 119
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
+ +D E +IH +K G D ++ N+LV+ Y +C + + ++F + ++ V
Sbjct: 120 PISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEV 179
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
SWN+II LA AL + RM +D PN T ++ L+ GK IH
Sbjct: 180 SWNSIINGLACKGRCWDALNAF-RMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGF 238
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TS 326
++ E D+F+ ++L+D YAK + A F + +NIVSWNA+I YA P +
Sbjct: 239 SMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEA 298
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTS 382
I +I++ + G PN TF++VL + L ++H + +R+G + +V SL+
Sbjct: 299 IRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDM 358
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
YAK G + A ++N + R D VS+NI+
Sbjct: 359 YAKCGCLHSA-------------------RNVFNTS--------------RKDEVSYNIL 385
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
I + D + L LF MR PD +FV ++SAC+ L L G +HG+ + +
Sbjct: 386 IIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHL 445
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
S FV N L+D Y KCG I + ++FN++ ++V +W +I G+ G + A+ F
Sbjct: 446 YSH-LFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFE 504
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
M + D V+ IAVL+AC HGGLV G + F M + +EP HY C+VDLL R
Sbjct: 505 AMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEM-LAQRLEPTEMHYTCMVDLLGRA 563
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G ++EA K+I +P P+A IW L C+
Sbjct: 564 GFVEEAAKLIQQLPIAPDANIWGALLGACR 593
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 168/654 (25%), Positives = 291/654 (44%), Gaps = 101/654 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLLSCDSLNPVEGA 59
MP+R+VVS+N+II S G +A + +MI R +P L+S SL P+ A
Sbjct: 71 MPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPN------LVSVISLLPISAA 124
Query: 60 QLQASVLKNGLFCADAFVG--------TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNS 111
L+ + + C VG AL+ YG+ G + + VF + K+ V+WNS
Sbjct: 125 -LEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNS 183
Query: 112 IVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG 171
I++ G D + F ++ + + ++ L + + G++IHG ++ G
Sbjct: 184 IINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMG 243
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
+ ++ +ANSL++MY + A +F +++ R++VSWN +I A + +A+ +
Sbjct: 244 TETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVI 303
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
+M PN TF V+ +CA L GK IHA ++ L D+FV ++L+D YAKC
Sbjct: 304 QMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCG 363
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLR 350
L A F+ S K+ VS+N LI+GY+ + S+ L E+ LG +P+ +F V+
Sbjct: 364 CLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVIS 422
Query: 351 SSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+ L ++H + +R ++ +V SL+ Y K G I A
Sbjct: 423 ACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIA-------------- 468
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
+L +Q+ D+ SWN +I G+ + + +F+ MR
Sbjct: 469 ------------------CRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDT 510
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
+ D +++++LSACS HG G +
Sbjct: 511 VQYDLVSYIAVLSACS-----------HG-------------------------GLVERG 534
Query: 527 VKIFNEMTDRNV----ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ F+EM + + + +T ++ LG GF + A + ++ L PD A+L A
Sbjct: 535 WQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQ---LPIAPDANIWGALLGA 591
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV-DLLVRYGHLKEAEKIITTM 635
CR G V G E + + ++P+ Y+ ++ ++ G EA KI M
Sbjct: 592 CRIYGNVELGRRAAEHL---FELKPQHCGYYILLSNIYAETGRWDEANKIRELM 642
>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/572 (30%), Positives = 291/572 (50%), Gaps = 45/572 (7%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTE--SSF 144
+ G L + + +F+ MPRK++V W + +S ++G E +F +++ S VA + +
Sbjct: 54 KSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAANDFACNA 113
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
+ L GEQ+H L ++ GF + + + L+ +Y +C +W+AE++F+ +E
Sbjct: 114 ALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEA 173
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
DVV + +++ AL + + +A+E+ +M + PN+ T ++ C ++G+ I
Sbjct: 174 PDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECP----RMIGEQI 229
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI-LGYASKSS 323
H ++K V+ +AL+DFY++ + + A F + +KN+VSW +++ L
Sbjct: 230 HGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRL 289
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL-LQLHCLIIRMGYENYEYVLGSLMTS 382
++ + E++ PNEF FS L + + L Q+HC I
Sbjct: 290 EDALRVFSEMISEAVEPNEFAFSIALGACGSVCLGRQIHCSAI----------------- 332
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
K L++D + +N + +Y R+G +E +L ++E PD+VSW
Sbjct: 333 --KCNLMTD-------------IRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAA 377
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
I+A NG ++ + L M + P++Y F S LS+C+ L L G LH L K
Sbjct: 378 ISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALK--- 434
Query: 503 ISSDTFVC--NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
+ D VC N LI+MY KCG IGS+ F+ M +V++W +LI L +G A LE
Sbjct: 435 LGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEA 494
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
F EM G++PD IAVL C H GLV+EG F M YG+ P HY C++D+L
Sbjct: 495 FSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLG 554
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G EA +I MPF P+ LIW+T L C+
Sbjct: 555 RNGRFDEALHMIKNMPFEPDVLIWKTLLASCK 586
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 163/624 (26%), Positives = 271/624 (43%), Gaps = 100/624 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
MP +NVV++ + IS +R G E A MF M+ G F L+ +
Sbjct: 68 MPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAANDFACNAALAACAAAGAGALS 127
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G Q+ + ++ G F ADA++G+ L+ LY R G + VF M +V + S+VS
Sbjct: 128 LGEQVHSLAVRAG-FAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSAL 186
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G + + + C+++R + E + ++ E GEQIHG ++K +
Sbjct: 187 CRNGDLARAVEVLCQMMRQGLQPNEHTMTSML----AECPRMIGEQIHGYMLKVMGSQSV 242
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ +L++ Y + AE +F++++ ++VVSW +++ AL ++ M +
Sbjct: 243 YASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISE 302
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN+ F + +C + LG+ IH IK L D+ V +AL+ Y + +
Sbjct: 303 AVEPNEFAFSIALGACGSV---CLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEV 359
Query: 297 HLCFSEISNKNIVSWNALI-LGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
+I N ++VSW A I + + S ++ LL+++ G+ PN++ FS L S
Sbjct: 360 EAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADL 419
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
LL QLHCL +++G + +L+ Y+K G I A +N+
Sbjct: 420 ALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNL---------- 469
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
D++SWN +I A +G VLE F M ++ PD+
Sbjct: 470 ----------------------HDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDD 507
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+++L C+ GL+K+ E TF F
Sbjct: 508 STFIAVLVGCNHA----------GLVKEGE-----TF---------------------FR 531
Query: 532 EMTDRNVITWTA-----LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-H 585
MTDR +T T +I LG NG AL + M F+PD + +L +C+ H
Sbjct: 532 LMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMP---FEPDVLIWKTLLASCKLH 588
Query: 586 GGL------VREGMELFERMNRSY 603
L + MEL ER + SY
Sbjct: 589 KNLDIGKLATDKLMELSERDSASY 612
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 127/315 (40%), Gaps = 44/315 (13%)
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELL 334
DV + +D K L A F + KN+V+W I G P + + ++L
Sbjct: 41 DVVLDCKRLDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADML 100
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLL------QLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
+ G N+F + L + A Q+H L +R G+ ++ L+
Sbjct: 101 ESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIE------- 153
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
+Y+R G ++ ++E PD+V + +++A
Sbjct: 154 -------------------------LYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCR 188
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
NGD +E+ M + P+ +T S+L+ C ++ +G +HG + K + S +
Sbjct: 189 NGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRM----IGEQIHGYMLKV-MGSQSVY 243
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
LID Y + G + +F + +NV++W +++ +G + AL F EM
Sbjct: 244 ASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEA 303
Query: 569 FKPDRVALIAVLTAC 583
+P+ A L AC
Sbjct: 304 VEPNEFAFSIALGAC 318
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 63/175 (36%), Gaps = 35/175 (20%)
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+D K G + ++ +F+ M +NV+ WT IS NG + A F +M G +
Sbjct: 49 LDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAAND 108
Query: 574 VALIAV-------------LTACRHGGLVREG-----------MELFERMNRSYGVE--- 606
A A L H VR G +EL+ R + E
Sbjct: 109 FACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVF 168
Query: 607 -----PEMDHYHCVVDLLVRYGHLKEAEKIITTM---PFPPNALIWRTFLEGCQR 653
P++ Y +V L R G L A +++ M PN + L C R
Sbjct: 169 RRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPR 223
>gi|302798571|ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
gi|300151099|gb|EFJ17746.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
Length = 833
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 191/670 (28%), Positives = 344/670 (51%), Gaps = 52/670 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSC-DSLNPVEG 58
M +R+++S+N+ I+A + G L + M G P + TF L +C S + G
Sbjct: 161 MRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNG 220
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A VL+ G+ D +GTAL+ +YGR GCL+ +F MP +++V+WN++V+
Sbjct: 221 RLIHALVLERGME-GDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTL 279
Query: 119 HGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + + LF +V + V T SF+ V++ ++ + L G +IH ++ + ++
Sbjct: 280 NAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIE 339
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VAN+LV MY +C G+ AE++F +E RD+VSWN +I A A+S + + L+ RM +
Sbjct: 340 VANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAER 399
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN----- 292
V P++ TF+ +++CA +++ G+++H +++ + V +A + Y+ C +
Sbjct: 400 VPPDRITFLMALDACAEIRDLDSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSS 459
Query: 293 ---LEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
+E F ++ ++++SWN +I GY + S +++ + +L G R N+ TF +
Sbjct: 460 SSLMEVVAGIFESMAARDVISWNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSL 519
Query: 349 LR--SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
L S AF +R G + V+ L SD +
Sbjct: 520 LSVCDSRAF---------LRQGETIHRRVINQ------TPELSSDPIV------------ 552
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
A I +Y + G+ + L ++ SWN +I+A A +G ++ +L + MR
Sbjct: 553 -AAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREG 611
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS----DTFVCNMLIDMYGKCGS 522
+ PD TF++LL+AC +A G+ HG + II S DT V N L++ Y KCG+
Sbjct: 612 VLPDRVTFITLLNAC-----VAGGAVRHGKMIHARIIDSGLEKDTVVANALVNFYSKCGN 666
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ ++ +F + R+V++W +I+ NG A+ AL+ M+ G +PD + + +L+A
Sbjct: 667 LDTATSLFGALDYRDVVSWNGIIAGFAHNGHAREALKSMWLMQQDGVRPDAITFLTILSA 726
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
H G +R+G + F M + +E ++HY C++DLL R G + +AE ++ M +
Sbjct: 727 SSHAGFLRQGGDDFVSMAVDHELERGVEHYGCMIDLLGRAGRIGDAEYFVSAMRDEDKEV 786
Query: 643 IWRTFLEGCQ 652
W T L C+
Sbjct: 787 SWMTLLSACE 796
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 186/659 (28%), Positives = 328/659 (49%), Gaps = 35/659 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M +R+VVS+ ++ISAY++ G+ AL +F M +P + TF LL +CDS +E G
Sbjct: 59 MRERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDG 118
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A V L +D V A++G+Y + D ++VF +M + L++WN+ ++ +
Sbjct: 119 KQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAE 178
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + L + +A + +FV ++ + L G IH LV++ G + ++++
Sbjct: 179 SGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVL 238
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDI 237
+LV MY +C + SA ++F + R+VVSWN ++ + + +F +A+EL+ RM +V +
Sbjct: 239 GTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAM 298
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P + +F+ V+N+ + G+ IHA + + L + V +ALV Y +C + A
Sbjct: 299 VEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAE 358
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
FS + +++VSWNA+I YA + L ++ P+ TF L + +
Sbjct: 359 RVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIR 418
Query: 357 LLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L +H L + G+ + V + M Y+ S + + + ++A
Sbjct: 419 DLDSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLM-----------EVVA 467
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
GI+ + D++SWN +I GD L +FK M I +
Sbjct: 468 GIFE-------------SMAARDVISWNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQV 514
Query: 473 TFVSLLSACSKLCNLALGSSLH-GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+SLLS C L G ++H +I +T +SSD V +++MYGKCG + ++ +F
Sbjct: 515 TFMSLLSVCDSRAFLRQGETIHRRVINQTPELSSDPIVAAAIVNMYGKCGELDTARHLFE 574
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ + RN+ +W ++ISA L+G A++A + M G PDRV I +L AC GG VR
Sbjct: 575 DTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAGGAVRH 634
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G + R+ S G+E + + +V+ + G+L A + + + + + W + G
Sbjct: 635 GKMIHARIIDS-GLEKDTVVANALVNFYSKCGNLDTATSLFGALDY-RDVVSWNGIIAG 691
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/434 (31%), Positives = 226/434 (52%), Gaps = 40/434 (9%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
LE G ++HG V ++ D L N LVNMY +C+ + A K+F + RDVVSW +I A
Sbjct: 14 LEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDVVSWTAMISA 73
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK-NALEC 275
A++ + +AL+L+ M+ + PN+ TF+ ++ +C + GK IHA+V LE
Sbjct: 74 YAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLES 133
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
DV V +A++ Y KC+ + A FSE+ ++++SWN I A T L++ +Q
Sbjct: 134 DVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQ 193
Query: 336 L-GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
L G P++ TF L + + + L +H L++ G E + VLG+
Sbjct: 194 LEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEG-DVVLGT------------ 240
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
A VT +Y R G ++ ++ ++VSWN ++A+C N
Sbjct: 241 ---ALVT----------------MYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNA 281
Query: 451 DYKEVLELFKYMRA-ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
+ E +ELFK M A A + P +F+++L+A + LA G +H +I++ +++S V
Sbjct: 282 HFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQ-IEV 340
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
N L+ MYG+CG +G + ++F+ M R++++W A+ISA +G A+ + F M
Sbjct: 341 ANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERV 400
Query: 570 KPDRVALIAVLTAC 583
PDR+ + L AC
Sbjct: 401 PPDRITFLMALDAC 414
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 154/539 (28%), Positives = 265/539 (49%), Gaps = 48/539 (8%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
F G L+ +Y R LDE VF+ M + +V+W +++S + + G + LF E+ S
Sbjct: 34 FFGNRLVNMYRRCSSLDEARKVFDRMRERDVVSWTAMISAYAQTGHQRQALDLFTEMAGS 93
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELLVANSLVNMYFQCAGIWS 194
+ +F+ ++ + + LE G+QIH V + ++ VAN+++ MY +C
Sbjct: 94 SLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCERADL 153
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A +F ++ RD++SWN I A AES ++ L L M ++ + P++ TFV +N+C G
Sbjct: 154 AMAVFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIG 213
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
++ G+ IHA V++ +E DV +G+ALV Y +C LE A F + +N+VSWNA+
Sbjct: 214 SRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAM 273
Query: 315 ILGYASKSS-PTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMG 368
+ + +I L ++ + P +F VL + + L ++H +I
Sbjct: 274 VASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQ 333
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
+ V +L+T Y + G + DA ++
Sbjct: 334 LLSQIEVANALVTMYGRCGGVGDA--------------------------------ERVF 361
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
S +ER D+VSWN +I+A A +G +EV+ LF MRA R+ PD TF+ L AC+++ +L
Sbjct: 362 SAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLD 421
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS--------VKIFNEMTDRNVIT 540
G ++H L ++ S + V N + +Y C S SS IF M R+VI+
Sbjct: 422 SGRTVHHLSVESGFGSCIS-VANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVIS 480
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
W +I+ G + AL F+ M G + ++V +++L+ C +R+G + R+
Sbjct: 481 WNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRV 539
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 161/589 (27%), Positives = 280/589 (47%), Gaps = 78/589 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGF-EPTQFTFGGLLSCDSLNPV--E 57
MP+RNVVS+N+++++ + + +A+ +F M+ EPT+ +F +L+ + E
Sbjct: 262 MPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTPEALAE 321
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ A + + L + V AL+ +YGR G + + VF M R+ LV+WN+++S +
Sbjct: 322 GRRIHAMIQERQLL-SQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYA 380
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G + + LF + V +F+ + + +DL+ G +H L +++GF +
Sbjct: 381 QSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLDSGRTVHHLSVESGFGSCIS 440
Query: 178 VANSLVNMYFQ--------------CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
VAN+ +++Y AGI F+ + RDV+SWNT+I ++ +
Sbjct: 441 VANATMHLYSSCSSSSSSSSSLMEVVAGI------FESMAARDVISWNTMITGYVQAGDS 494
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA--LECDVFVGS 281
AL ++ RM ++ + NQ TF+ +++ C G++IH +VI L D V +
Sbjct: 495 FSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRVINQTPELSSDPIVAA 554
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRP 340
A+V+ Y KC L+ A F + S++N+ SWN++I YA F L E ++ G P
Sbjct: 555 AIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREGVLP 614
Query: 341 NEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
+ TF +L + +A ++ +H II G E
Sbjct: 615 DRVTFITLLNACVAGGAVRHGKMIHARIIDSGLE-------------------------- 648
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
+ V AN + Y++ G + L L+ D+VSWN +IA AHNG +E L
Sbjct: 649 ------KDTVVANALVNFYSKCGNLDTATSLFGALDYRDVVSWNGIIAGFAHNGHAREAL 702
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS-------LHGLIKKTEIISSDTFV 509
+ M+ + PD TF+++LSA S L G H L + E +
Sbjct: 703 KSMWLMQQDGVRPDAITFLTILSASSHAGFLRQGGDDFVSMAVDHELERGVE-----HYG 757
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNV-ITWTALISALGLNGFAQRA 557
C +ID+ G+ G IG + + M D + ++W L+SA ++G +RA
Sbjct: 758 C--MIDLLGRAGRIGDAEYFVSAMRDEDKEVSWMTLLSACEVHGDEERA 804
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 121/249 (48%), Gaps = 2/249 (0%)
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
R++ N + +Y R +E K+ ++ D+VSW +I+A A G ++ L+LF M
Sbjct: 31 RSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDVVSWTAMISAYAQTGHQRQALDLFTEM 90
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ + P+ TF++LL AC L G +H + +++ SD V N ++ MY KC
Sbjct: 91 AGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCER 150
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
++ +F+EM +R++I+W I+A +G L + M+ G PD+V ++ L A
Sbjct: 151 ADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALNA 210
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C + G L + G+E ++ +V + R G L+ A +I MP N +
Sbjct: 211 CIGSRSLSNG-RLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMP-ERNVV 268
Query: 643 IWRTFLEGC 651
W + C
Sbjct: 269 SWNAMVASC 277
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 194/606 (32%), Positives = 289/606 (47%), Gaps = 42/606 (6%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G L A ++K+ C ++ +L+ LY + L E VFE + K +V+WN I++ +
Sbjct: 24 KGKALHAQIIKSSSSCV--YIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGY 81
Query: 117 GKHG--FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+HG M LF + A +F GV S D G H + IK
Sbjct: 82 SQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCR 141
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ V +SL+NMY + A K+F + R+ VSW T+I A + +AL L+ M
Sbjct: 142 DVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMR 201
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ N+ F V+++ + GK IH +KN L V VG+ALV YAKC +L+
Sbjct: 202 REEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLD 261
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS-- 351
A F S+KN ++W+A+I GYA L + L G RP+EFTF V+ +
Sbjct: 262 DALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACS 321
Query: 352 --SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
A++ Q+H ++++G+E+ YV+ +L+ YAK I DA
Sbjct: 322 DLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDA----------------- 364
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
R G L+ PDIV W +I NG+ ++ L L+ M I P
Sbjct: 365 -------RKG--------FDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILP 409
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ T S+L ACS L L G +H K + + + L MY KCG + +
Sbjct: 410 NELTMASVLKACSSLAALEQGKQIHARTVKYG-FGLEVPIGSALSTMYAKCGCLKDGTLV 468
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F M R+VI+W A+IS L NG + ALE F EM+ G KPD V + +L+AC H GLV
Sbjct: 469 FRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLV 528
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
G F M +G++P ++HY C+VD+L R G LKEA + + +WR L
Sbjct: 529 ERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILG 588
Query: 650 GCQRCR 655
C+ R
Sbjct: 589 ACRNYR 594
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/493 (30%), Positives = 246/493 (49%), Gaps = 42/493 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDA--LRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVE 57
+ +++VVS+N II+ YS+ G + + +F M P TF G+ + S L
Sbjct: 66 IQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAA 125
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G +L +V C D FVG++L+ +Y + G E VF+ MP ++ V+W +++S +
Sbjct: 126 GGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYA 185
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + LF + R E E F V+ L+ + + G+QIH + +KNG +
Sbjct: 186 SQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVS 245
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+LV MY +C + A + F+ ++ ++W+ +I A+S + KAL+L+ M +
Sbjct: 246 VGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSG 305
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P++ TFV VIN+C+ L + GK +H ++K E ++V +ALVD YAKC ++ A
Sbjct: 306 IRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDAR 365
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLR--SSLA 354
F + +IV W ++I GY L +++ G PNE T + VL+ SSLA
Sbjct: 366 KGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLA 425
Query: 355 F--QLLQLHCLIIRMGYENYEYVLGS-LMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
Q Q+H ++ G+ E +GS L T YAK G + D
Sbjct: 426 ALEQGKQIHARTVKYGF-GLEVPIGSALSTMYAKCGCLKDG------------------- 465
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+ ++ D++SWN +I+ + NG KE LELF+ M+ PD
Sbjct: 466 -------------TLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDY 512
Query: 472 YTFVSLLSACSKL 484
TFV++LSACS +
Sbjct: 513 VTFVNILSACSHM 525
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 220/423 (52%), Gaps = 13/423 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
MP+RN VS+ ++IS Y+ +AL +F M +F F +LS +L + G
Sbjct: 169 MPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNG 228
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +KNGL + VG AL+ +Y + G LD+ + FE K+ +TW+++++ + +
Sbjct: 229 KQIHCIAVKNGLLSIVS-VGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQ 287
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + LF + S + +E +FVGVI+ S+ G+Q+H ++K GF+ ++ V
Sbjct: 288 SGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYV 347
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LV+MY +C+ I A K F ++ D+V W ++IG ++ AL LY RM ++ +
Sbjct: 348 MTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGI 407
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+ T V+ +C+ L GK IHA+ +K +V +GSAL YAKC L+ L
Sbjct: 408 LPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTL 467
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F + ++++SWNA+I G + L E +QL G +P+ TF ++L + L
Sbjct: 468 VFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGL 527
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYA-------KSGLISDALAFVTALNIPRAVVPANI 410
++ RM ++ E+ + + YA ++G + +A+ F + I + I
Sbjct: 528 VERGWGYFRMMFD--EFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRI 585
Query: 411 IAG 413
I G
Sbjct: 586 ILG 588
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 143/515 (27%), Positives = 243/515 (47%), Gaps = 43/515 (8%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
SF + ++ + L+ G+ +H +IK+ + +ANSLVN+Y +C + A+ +F+ +
Sbjct: 8 SFFTALLQYTHNRSLQKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAKFVFERI 66
Query: 203 EIRDVVSWNTIIGALAESENFGKA--LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
+ +DVVSWN II ++ G + +EL+ RM + PN TF V + + L ++
Sbjct: 67 QNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAG 126
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
G+ HA IK DVFVGS+L++ Y K A F + +N VSW +I GYAS
Sbjct: 127 GRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYAS 186
Query: 321 KSSPTSIFLLIELLQLGYR-PNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYV 375
+ L L++ NEF F+ VL + +L+ Q+HC+ ++ G + V
Sbjct: 187 QKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSV 246
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
+L+T YAK G + DAL + ++ + +I G Y ++G ++ +K
Sbjct: 247 GNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITG-YAQSGDSDKALK--------- 296
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
LF M + I P +TFV +++ACS L G +H
Sbjct: 297 ----------------------LFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHD 334
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
+ K S +V L+DMY KC SI + K F+ + + +++ WT++I NG +
Sbjct: 335 YLLKLG-FESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENE 393
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
AL + ME G P+ + + +VL AC + +G ++ R + YG E+ +
Sbjct: 394 DALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVK-YGFGLEVPIGSAL 452
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + G LK+ + MP + + W + G
Sbjct: 453 STMYAKCGCLKDGTLVFRRMP-ARDVISWNAMISG 486
>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Vitis vinifera]
Length = 729
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 198/686 (28%), Positives = 338/686 (49%), Gaps = 75/686 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGF-EPTQFTFGGLLS-CDSLN-PVEGAQ 60
++ N +++ +R + ++++F+ + + + +P FT L+ C +L G Q
Sbjct: 15 EQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQ 74
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM------------------- 101
L A ++ GL A VG LL Y + L V VF ++
Sbjct: 75 LHAYSIQTGL-KAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLG 133
Query: 102 ------------PRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH 149
PR V WN+I++ ++ E + LF E+ + V + +F V+
Sbjct: 134 QIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVL- 192
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE--IRDV 207
L + + L+FG ++H LVIK GF V N+L+ MYF + A ++F++ E + D
Sbjct: 193 SLCSLELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDD 252
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
+++N +IG LA +AL ++ M + P + TFV V++SC+ + + +HA+
Sbjct: 253 ITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCSSAR---VSHQVHAQ 309
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTS 326
IK E V +A + Y+ C NL H+ F + K+++SWN +I+ YA + +
Sbjct: 310 AIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLA 369
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
I +++ + G P+EFT +L SS + + I++M +K+
Sbjct: 370 ILAFLQMQRAGIEPDEFTIGSLLASSESLE-------IVKM-----------FQALVSKN 411
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
GL S + + A+V A +++ GQ + ++ + + P+++SWN +I+
Sbjct: 412 GLNSK-------IEVSNALVSA------FSKHGQIEQAYQVFNNMSSPNLISWNTIISGF 458
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
NG + LE F + + + P+ YT +LS C+ + L G +HG I ++ + S
Sbjct: 459 LFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSV- 517
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
T + N LI MY KCG + S++IFN M R++++W A+ISA +G + A+ F+ M+
Sbjct: 518 TSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQD 577
Query: 567 LG-FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G KPD+ AVL+AC H GLV +G +F M YG EP DH C+VDLL R G+L
Sbjct: 578 SGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYL 637
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGC 651
+EAE++I + + IW T C
Sbjct: 638 EEAERLINSKHLKIVSSIWWTLFSAC 663
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 142/259 (54%), Gaps = 7/259 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+ +++++S+N II Y++ + A+ FL M G EP +FT G LL S +SL V+
Sbjct: 345 LEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIVK-- 402
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
QA V KNGL + V AL+ + +HG +++ VF +M +L++WN+I+S F +
Sbjct: 403 MFQALVSKNGL-NSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFN 461
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
GF + F EL+ S + + V+ ++ L G+QIHG ++++G +
Sbjct: 462 GFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLG 521
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS-VDIV 238
N+L+ MY +C + + ++F + RD+VSWN +I A A+ +A+ + M V
Sbjct: 522 NALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGV 581
Query: 239 FPNQTTFVYVINSC--AGL 255
P+Q TF V+++C AGL
Sbjct: 582 KPDQATFTAVLSACSHAGL 600
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 173/593 (29%), Positives = 300/593 (50%), Gaps = 40/593 (6%)
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
V+KNG+ C D+ + ++L+ +Y + L V E+MP + + WN +S +++
Sbjct: 15 VIKNGI-CPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQE 73
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ LF + + + L + F +I ++ D +GE IH V K GF+ ++L++N+ V
Sbjct: 74 AVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVT 133
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
MY + + + + FK + I ++ S N ++ ++E + + +++ V+ PN T
Sbjct: 134 MYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYT 193
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
F+ ++ +CA + GK+IH +VIK+ + D + ++LV+ YAKC + A F EI
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253
Query: 305 NKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QL 360
+++VSW ALI G+ ++ + + + ++L G+ PN +TF +LRS + + Q+
Sbjct: 254 ERDVVSWTALITGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV 313
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H I++ + ++V +L+ YAK+ + DA L I R + +I Y + GQ
Sbjct: 314 HAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVAGYAQDGQ 372
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+ VK Q++R + P+ +T S LS
Sbjct: 373 GEKAVKCFIQMQREG-------------------------------VKPNEFTLASSLSG 401
Query: 481 CSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
CS++ L G LH + IK + S D FV + L+DMY KCG + + +F+ + R+ +
Sbjct: 402 CSRIATLDSGRQLHSMAIKAGQ--SGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTV 459
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W +I +G +AL+ F M G PD V I VL+AC H GL+ EG + F +
Sbjct: 460 SWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSL 519
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++ YG+ P ++HY C+VD+L R G E E I M N LIW T L C+
Sbjct: 520 SKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACK 572
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 217/456 (47%), Gaps = 41/456 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQL 61
N+ S N+++S + + R+ + ++ GFEP +TF +L +C S + EG +
Sbjct: 154 ENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAI 213
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V+K+G+ D+ + +L+ +Y + G + VF ++P + +V+W ++++ F G+
Sbjct: 214 HGQVIKSGI-NPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGY 272
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ +F +++ +F+ ++ S+ D++ G+Q+H ++KN D V +
Sbjct: 273 GSG-LRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTA 331
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
LV+MY + + AE +F + RD+ +W I+ A+ KA++ +++M + V PN
Sbjct: 332 LVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPN 391
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ T ++ C+ + G+ +H+ IK D+FV SALVD YAKC +E A + F
Sbjct: 392 EFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFD 451
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
+ +++ VSWN +I GY+ E +L G P+E TF VL
Sbjct: 452 GLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVL----------- 500
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYN 416
++ + GLI + +L+ + P + I
Sbjct: 501 --------------------SACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILG 540
Query: 417 RTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
R G+++E + +++ +++ W V+ AC +G+
Sbjct: 541 RAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGN 576
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 148/257 (57%), Gaps = 4/257 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P+R+VVS+ ++I+ + GY LR+F M+ GF P +TF +L SC SL+ V+ G
Sbjct: 252 IPERDVVSWTALITGFVAEGY-GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 310
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A ++KN L D FVGTAL+ +Y ++ L++ ++F + ++ L W IV+ + +
Sbjct: 311 KQVHAQIVKNSLDGND-FVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQ 369
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E + F ++ R V E + + G S L+ G Q+H + IK G ++ V
Sbjct: 370 DGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFV 429
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
A++LV+MY +C + AE +F + RD VSWNTII ++ GKAL+ + M +
Sbjct: 430 ASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGT 489
Query: 239 FPNQTTFVYVINSCAGL 255
P++ TF+ V+++C+ +
Sbjct: 490 VPDEVTFIGVLSACSHM 506
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 188/404 (46%), Gaps = 61/404 (15%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
K I +VIKN + D + S+LV+ Y KC++L+ A E+ +++ WN +
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKL------ 62
Query: 322 SSPTSIFLLIELLQLGY-------RPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYE 370
SS S + L E +QL Y R N+F F+ ++ ++ + +H + + G+E
Sbjct: 63 SSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFE 122
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ + + +T Y K+ + + F A+ I N+++G + T ++ ++L Q
Sbjct: 123 SDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCD-TETCDQGPRILIQ 181
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
L ++E F+ P+ YTF+S+L C+ +L G
Sbjct: 182 L-----------------------LVEGFE--------PNMYTFISILKTCASKGDLNEG 210
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
++HG + K+ I+ D+ + N L+++Y KCGS + K+F E+ +R+V++WTALI+
Sbjct: 211 KAIHGQVIKSG-INPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVA 269
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
G+ L F +M GF P+ I++L +C V G ++ ++ V+ +D
Sbjct: 270 EGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQI-----VKNSLD 323
Query: 611 HYHCV----VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
V VD+ + L++AE I + + W + G
Sbjct: 324 GNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVAG 366
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQ 62
R+ VS+N+II YS+ G AL+ F M++ G P + TF G+LS C + +E +
Sbjct: 456 RDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKH 515
Query: 63 ASVLKNGLFCADAFVGTA-LLGLYGRHGCLDEVVSVFEDMPRKS-LVTWNSIVSIFGKHG 120
+ L A ++ + GR G EV S E+M S ++ W +++ HG
Sbjct: 516 FNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHG 575
Query: 121 FVE 123
+E
Sbjct: 576 NIE 578
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 200/679 (29%), Positives = 321/679 (47%), Gaps = 87/679 (12%)
Query: 55 PVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
P G Q+ A +K G F AD F+ T LL +Y R G L + +FE MP ++L +W +I+S
Sbjct: 75 PKLGKQVHAHTIKTG-FDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILS 133
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
++ HG E+ LF L V L F V S +E G Q+HGLVIK F
Sbjct: 134 VYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCL 193
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD---------------------------- 206
+ V+N+L++MY +C + A+K+ + RD
Sbjct: 194 NIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMK 253
Query: 207 --------VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
VVSW+ +IG A++ +A+E+ RM V+ + PN T V+ +CA LQ
Sbjct: 254 SLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRL 313
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI---------- 308
LGK +H + ++ + V +ALVD Y +C ++ GA F + S KN+
Sbjct: 314 DLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGY 373
Query: 309 -------------------------VSWNALILGYASKSSPTSIFLLIE--LLQLGYRPN 341
+SWN++I GY F + + L++ G P+
Sbjct: 374 CESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPD 433
Query: 342 EFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEYVLGSLMTSYAK-SGLISDALAFV 396
FT VL + Q ++H I G ++ +V G+L+ Y+K L + +AF
Sbjct: 434 SFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFD 493
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDY 452
+ + V N + Y R+ Q LL +++ P+I +WN ++A N
Sbjct: 494 EVME--KDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQL 551
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
++LF M+ +++ PD YT +L ACS+L L G H K +D +
Sbjct: 552 DLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGY-DTDVHIGAA 610
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
L+DMY KCGS+ + ++ +++ N+++ A+++A ++G + + F+ M LGF PD
Sbjct: 611 LVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPD 670
Query: 573 RVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII 632
V ++VL++C H G V G E F+ M Y V+P + HY +VDLL R G L EA ++I
Sbjct: 671 HVTFLSVLSSCVHVGSVETGCEFFDLMGY-YNVKPTLKHYTSMVDLLSRSGQLHEAYELI 729
Query: 633 TTMPFPPNALIWRTFLEGC 651
MP ++++W L GC
Sbjct: 730 KKMPVECDSVLWGALLGGC 748
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 128/527 (24%), Positives = 223/527 (42%), Gaps = 108/527 (20%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP NVVS++++I +++ GY E+A+ M M G P T G+L +C L ++ G
Sbjct: 259 MP--NVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLG 316
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVF-------------------- 98
QL + ++ F ++ V AL+ +Y R G + +F
Sbjct: 317 KQLHGYITRHD-FISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCE 375
Query: 99 -EDMPR--------------KSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
D+ + + L++WNSI+S + ++ ++ +F ++ E +S
Sbjct: 376 SGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSF 435
Query: 144 FVG-VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
+G V+ ++ L G++IH I G + V +LV MY +C + +A+ F +V
Sbjct: 436 TLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEV 495
Query: 203 EIRDV-----------------------------------VSWNTIIGALAESENFGKAL 227
+DV +WN+I+ L E+ +
Sbjct: 496 MEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTM 555
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
+L+ M + + P+ T ++ +C+ L GK HA IK + DV +G+ALVD Y
Sbjct: 556 QLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMY 615
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFS 346
AKC +L+ A L + ISN N+VS NA++ A I L +L LG+ P+ TF
Sbjct: 616 AKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFL 675
Query: 347 HVLRSSLAFQLLQLHCLIIR-MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
VL S + ++ C MGY N + L T++
Sbjct: 676 SVLSSCVHVGSVETGCEFFDLMGYYN-----------------VKPTLKHYTSM------ 712
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
+ +R+GQ +E +L+ ++ D V W ++ C +G+
Sbjct: 713 ------VDLLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCVTHGN 753
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 134/300 (44%), Gaps = 38/300 (12%)
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
Q+H I+ G++ ++ L+ YA+ GL+ DA
Sbjct: 80 QVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADF------------------------ 115
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
L + ++ SW +++ +G ++E LF+ ++ + D + F +
Sbjct: 116 --------LFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVF 167
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
ACS L ++ LG LHGL+ K + +V N LIDMYGKCGS+ + K+ +M +R+
Sbjct: 168 KACSGLGSVELGRQLHGLVIKFR-FCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDS 226
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFK-PDRVALIAVLTACRHGGLVREGMELFE 597
+TW ++I+A NG ALE +M+ L + P+ V+ AV+ G E +E+
Sbjct: 227 VTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLF 286
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHL---KEAEKIITTMPFPPNALIWRTFLEGCQRC 654
RM + G+ P V+ R L K+ IT F N ++ ++ +RC
Sbjct: 287 RM-QVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRC 345
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 6/178 (3%)
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+ S+L +C C LG +H KT +D F+ L+ MY +CG + + +F M
Sbjct: 65 YASVLDSCK--CP-KLGKQVHAHTIKTGF-DADGFIDTKLLQMYARCGLLKDADFLFETM 120
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
RN+ +W A++S +G + A F+ ++F G + D V AC G V G
Sbjct: 121 PMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGR 180
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+L + + + + + ++D+ + G L +A+K++ MP +++ W + + C
Sbjct: 181 QLHGLVIK-FRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMP-ERDSVTWNSVITAC 236
>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 187/620 (30%), Positives = 319/620 (51%), Gaps = 55/620 (8%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L +C + + G + ++K G + + + + + Y ++G LD F+ K
Sbjct: 55 LKACSNTSFNLGTAMHGCLIKQGCQSSTS-IANSTIDFYMKYGDLDSAQRAFDSTKNKDS 113
Query: 107 VTWNSIVSIFGKHGFVED--CMFLFCELVRSEVALTE---SSFVGVIHGLSNEQDLEFGE 161
V+WN +V HG + M C ++ A + SS + VI + G
Sbjct: 114 VSWNVMV-----HGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGF 168
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAES 220
HG + ++GF L V NSL+++Y + ++ A K+F ++ +R DVVSW+ +IG +
Sbjct: 169 AFHGYIFRSGFSAILSVQNSLLSLYAEVH-MYFAYKLFGEMSVRNDVVSWSVMIGGFVQI 227
Query: 221 ENFGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ ++ M + + P+ T V V+ +C L++ LG +H VI LE D+FV
Sbjct: 228 GEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFV 287
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGY 338
G++L+D Y+KC N+ A F EI KNI+SWN ++ Y ++S ++ LL +++ G
Sbjct: 288 GNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGA 347
Query: 339 RPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
+E T ++VL+ + F + +H +IIR GYE+ E +L S++ +YAK L+ A
Sbjct: 348 EKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARM 407
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
+N + D+V+W+ +IA A NG E
Sbjct: 408 VFDGMN--------------------------------KKDVVAWSTMIAGFARNGKPDE 435
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
+ +FK M + P+N + ++L+ AC+ L HG+ + + +S+ + +I
Sbjct: 436 AISVFKQMNE-EVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGL-ASEVAIGTSII 493
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
DMY KCG I +S++ FN++ +NV+ W+A+ISA +NG A AL F +++ G KP+ V
Sbjct: 494 DMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAV 553
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
+++L+AC HGGL+ EG+ F M + +G+EP ++HY C+VD+L R G EA ++I
Sbjct: 554 TALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEK 613
Query: 635 MP--FPPNALIWRTFLEGCQ 652
+P A IW T L C+
Sbjct: 614 LPKEMEAGASIWGTLLSSCR 633
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/538 (21%), Positives = 234/538 (43%), Gaps = 48/538 (8%)
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ++ + L+ E+ S L+++ + I + G +HG +IK G +A
Sbjct: 26 GNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNTSFNLGTAMHGCLIKQGCQSSTSIA 85
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
NS ++ Y + + SA++ F + +D VSWN ++ + + L +++
Sbjct: 86 NSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQ 145
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN ++ + VI + L+ G + H + ++ + V ++L+ YA+ ++ A+
Sbjct: 146 PNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAYKL 204
Query: 300 FSEISNKN-IVSWNALILGYASKSSPTSIFLLIE--LLQLGYRPNEFTFSHVLRSSLAFQ 356
F E+S +N +VSW+ +I G+ FL+ + + G P+ T VL++ +
Sbjct: 205 FGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLK 264
Query: 357 LLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ L H L+I G E+ +V SL+ Y+K N+ A
Sbjct: 265 DISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSK------------CFNVHSA-------- 304
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K ++ +I+SWN++++A N + E L L M D
Sbjct: 305 ------------FKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEV 352
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T ++L + S+HG+I + S+ + N +ID Y KC + + +F+
Sbjct: 353 TLANVLQIAKHFLDSLKCRSVHGVIIRKG-YESNELLLNSVIDAYAKCNLVELARMVFDG 411
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREM--EFLGFKPDRVALIAVLTACRHGGLVR 590
M ++V+ W+ +I+ NG A+ F++M E + P+ V+++ ++ AC +R
Sbjct: 412 MNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNEEVI---PNNVSIMNLMEACAVSAELR 468
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ + + G+ E+ ++D+ + G ++ + + +P N + W +
Sbjct: 469 QS-KWAHGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIP-QKNVVCWSAMI 524
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 133/255 (52%), Gaps = 4/255 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEG 58
+P++N++S+N ++SAY +AL + M+ G E + T +L L+ ++
Sbjct: 311 IPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKC 370
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +++ G + ++ + +++ Y + ++ VF+ M +K +V W+++++ F +
Sbjct: 371 RSVHGVIIRKG-YESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFAR 429
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G ++ + +F ++ EV S + ++ + +L + HG+ ++ G E+ +
Sbjct: 430 NGKPDEAISVFKQM-NEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAI 488
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
S+++MY +C I ++ + F + ++VV W+ +I A + +AL L+ ++ +
Sbjct: 489 GTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGT 548
Query: 239 FPNQTTFVYVINSCA 253
PN T + ++++C+
Sbjct: 549 KPNAVTALSLLSACS 563
>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 187/620 (30%), Positives = 319/620 (51%), Gaps = 55/620 (8%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L +C + + G + ++K G + + + + + Y ++G LD F+ K
Sbjct: 55 LKACSNTSFNLGTAMHGCLIKQGCQSSTS-IANSTIDFYMKYGDLDSAQRAFDSTKNKDS 113
Query: 107 VTWNSIVSIFGKHGFVED--CMFLFCELVRSEVALTE---SSFVGVIHGLSNEQDLEFGE 161
V+WN +V HG + M C ++ A + SS + VI + G
Sbjct: 114 VSWNVMV-----HGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGF 168
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAES 220
HG + ++GF L V NSL+++Y + ++ A K+F ++ +R DVVSW+ +IG +
Sbjct: 169 AFHGYIFRSGFSAILSVQNSLLSLYAEVH-MYFAHKLFGEMSVRNDVVSWSVMIGGFVQI 227
Query: 221 ENFGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ ++ M + + P+ T V V+ +C L++ LG +H VI LE D+FV
Sbjct: 228 GEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFV 287
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGY 338
G++L+D Y+KC N+ A F EI KNI+SWN ++ Y ++S ++ LL +++ G
Sbjct: 288 GNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGA 347
Query: 339 RPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
+E T ++VL+ + F + +H +IIR GYE+ E +L S++ +YAK L+ A
Sbjct: 348 EKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARM 407
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
+N + D+V+W+ +IA A NG E
Sbjct: 408 VFDGMN--------------------------------KKDVVAWSTMIAGFARNGKPDE 435
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
+ +FK M + P+N + ++L+ AC+ L HG+ + + +S+ + +I
Sbjct: 436 AISVFKQMNE-EVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGL-ASEVDIGTSII 493
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
DMY KCG I +S++ FN++ +NV+ W+A+ISA +NG A AL F +++ G KP+ V
Sbjct: 494 DMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAV 553
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
+++L+AC HGGL+ EG+ F M + +G+EP ++HY C+VD+L R G EA ++I
Sbjct: 554 TALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEK 613
Query: 635 MP--FPPNALIWRTFLEGCQ 652
+P A IW T L C+
Sbjct: 614 LPKEMEAGASIWGTLLSSCR 633
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/538 (21%), Positives = 235/538 (43%), Gaps = 48/538 (8%)
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ++ + L+ E+ S L+++ + I + G +HG +IK G +A
Sbjct: 26 GNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNTSFNLGTAMHGCLIKQGCQSSTSIA 85
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
NS ++ Y + + SA++ F + +D VSWN ++ + + L +++
Sbjct: 86 NSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQ 145
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN ++ + VI + L+ G + H + ++ + V ++L+ YA+ ++ AH
Sbjct: 146 PNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAHKL 204
Query: 300 FSEISNKN-IVSWNALILGYASKSSPTSIFLLIE--LLQLGYRPNEFTFSHVLRSSLAFQ 356
F E+S +N +VSW+ +I G+ FL+ + + G P+ T VL++ +
Sbjct: 205 FGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLK 264
Query: 357 LLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ L H L+I G E+ +V SL+ Y+K N+ A
Sbjct: 265 DISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSK------------CFNVHSA-------- 304
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K ++ +I+SWN++++A N + E L L M D
Sbjct: 305 ------------FKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEV 352
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T ++L + S+HG+I + S+ + N +ID Y KC + + +F+
Sbjct: 353 TLANVLQIAKHFLDSLKCRSVHGVIIRKG-YESNELLLNSVIDAYAKCNLVELARMVFDG 411
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREM--EFLGFKPDRVALIAVLTACRHGGLVR 590
M ++V+ W+ +I+ NG A+ F++M E + P+ V+++ ++ AC +R
Sbjct: 412 MNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNEEVI---PNNVSIMNLMEACAVSAELR 468
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ + + G+ E+D ++D+ + G ++ + + +P N + W +
Sbjct: 469 QS-KWAHGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIP-QKNVVCWSAMI 524
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 133/255 (52%), Gaps = 4/255 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEG 58
+P++N++S+N ++SAY +AL + M+ G E + T +L L+ ++
Sbjct: 311 IPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKC 370
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +++ G + ++ + +++ Y + ++ VF+ M +K +V W+++++ F +
Sbjct: 371 RSVHGVIIRKG-YESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFAR 429
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G ++ + +F ++ EV S + ++ + +L + HG+ ++ G E+ +
Sbjct: 430 NGKPDEAISVFKQM-NEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDI 488
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
S+++MY +C I ++ + F + ++VV W+ +I A + +AL L+ ++ +
Sbjct: 489 GTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGT 548
Query: 239 FPNQTTFVYVINSCA 253
PN T + ++++C+
Sbjct: 549 KPNAVTALSLLSACS 563
>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
Length = 1073
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 193/729 (26%), Positives = 358/729 (49%), Gaps = 81/729 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M D++VVS+N++IS Y+ G ++A +F M G +P Q TF +LS C S +E G
Sbjct: 161 MEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFG 220
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + + K G + +D V TAL+ +Y + G L+ VF +M +++V+W +++S + +
Sbjct: 221 EQIHSRIAKAG-YESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQ 279
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG + + LF +L+RS + + SF ++ +N DL G ++H + + G + E+LV
Sbjct: 280 HGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLV 339
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L++MY +C + +A ++F ++ + +WN +I E +A L+ M
Sbjct: 340 GNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGEGL-MEEAFRLFRAMEQKGF 398
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ T+ ++ CA + GK +H+++ + D+ V +AL+ YAKC + E A
Sbjct: 399 QPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARK 458
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F+++ +N++SWNA I F + ++ P+ TF +L S + +
Sbjct: 459 VFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPED 518
Query: 358 LQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL---------------AFVTA 398
L+ +H I + G + +V +L++ Y + G ++DA A + A
Sbjct: 519 LERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAA 578
Query: 399 -----------------------------LNIPRAVV------PANIIAGIYNRTGQYNE 423
+N+ RAV +I G+ + G + +
Sbjct: 579 NVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGG-FGK 637
Query: 424 TVKLLSQL--------------------ERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+++L+ L + D+V WN ++AA AH+ ++ L+LF+ M+
Sbjct: 638 DIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQ 697
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ PD+ T+ + L+AC++L + G +H +K+ + +DT V N LI+MY +CG +
Sbjct: 698 LEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAG-METDTRVSNSLIEMYSRCGCL 756
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
S+ ++F +M R++ +W ALI+ NG ALE + M P++ ++L++
Sbjct: 757 CSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSY 816
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
G + + E + + + +EP HY +V L R G LKEAE+ I + AL+
Sbjct: 817 AQLGEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAESAALM 876
Query: 644 WRTFLEGCQ 652
W + L C+
Sbjct: 877 WESLLVACR 885
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/588 (26%), Positives = 299/588 (50%), Gaps = 41/588 (6%)
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
+++ F D ++ L+ +Y + G +++ +VF+ M K +V+WN+++S + HG ++
Sbjct: 126 MRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEA 185
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
LF ++ R + +++F+ ++ + LEFGEQIH + K G++ ++ V+ +L+NM
Sbjct: 186 ADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINM 245
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C + A K+F ++ R+VVSW +I + + +AL L+ ++ + PN+ +F
Sbjct: 246 YCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSF 305
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
++ +C + G +HA + + LE +V VG+AL+ Y++C +L A F + +
Sbjct: 306 ASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRS 365
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL-----RSSLAFQLLQL 360
N +WNA+I GY + L + Q G++P++FT++ +L R+ L + +L
Sbjct: 366 LNRTTWNAMIAGYGEGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLD-RGKEL 424
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H I G++ V +L++ YAK G
Sbjct: 425 HSQIASTGWQTDLTVATALISMYAK--------------------------------CGS 452
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
E K+ +Q+ +++SWN I+ C + KE + FK MR + PD+ TF++LL++
Sbjct: 453 PEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNS 512
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C+ +L G +HG I + ++S++ V N LI MYG+CG++ + ++F + R++ +
Sbjct: 513 CTSPEDLERGRYIHGKINQWGMLSNN-HVANALISMYGRCGNLADAREVFYRIRRRDLGS 571
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W A+I+A +G A + FR+ G K D+ I VL A + + G + +
Sbjct: 572 WNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAG-RMIHGLV 630
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
G ++ ++ + + G L++AE + +T+ + + W L
Sbjct: 631 EKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQ-EKDVVCWNAML 677
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 235/482 (48%), Gaps = 40/482 (8%)
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+ L G+++H + F ++ + N L++MY +C I A +F+ +E +DVVSWN +I
Sbjct: 114 KSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMI 173
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
A +A +L+ +M + + PNQ TF+ ++++C G+ IH+++ K E
Sbjct: 174 SGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYE 233
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIEL 333
DV V +AL++ Y KC +LE A F+E+ +N+VSW A+I GY S ++ L +L
Sbjct: 234 SDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKL 293
Query: 334 LQLGYRPNEFTFSHVLRSSLA----FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
++ G +PN+ +F+ +L + + L+LH I + G E
Sbjct: 294 IRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLE------------------- 334
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
+ V+ N + +Y+R G ++ L + +WN +IA
Sbjct: 335 -------------QEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE- 380
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
G +E LF+ M PD +T+ SLL+ C+ +L G LH I T +D V
Sbjct: 381 GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTG-WQTDLTV 439
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
LI MY KCGS + K+FN+M +RNVI+W A IS + + A + F++M
Sbjct: 440 ATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDV 499
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
PD + I +L +C + G + ++N+ +G+ + ++ + R G+L +A
Sbjct: 500 NPDHITFITLLNSCTSPEDLERGRYIHGKINQ-WGMLSNNHVANALISMYGRCGNLADAR 558
Query: 630 KI 631
++
Sbjct: 559 EV 560
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 204/426 (47%), Gaps = 41/426 (9%)
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V N + + C ++ GK +H + + D+++ + L+ Y+KC ++E A+
Sbjct: 96 VQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDAN 155
Query: 298 LCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL---RSSL 353
F + +K++VSWNA+I GYA + L ++ + G +PN+ TF +L +S +
Sbjct: 156 NVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPI 215
Query: 354 AFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
A + Q+H I + GYE+ V +L+ Y K G +L + R
Sbjct: 216 ALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCG----------SLELAR--------- 256
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K+ +++ ++VSW +I+ +GD +E L LF+ + + I P+
Sbjct: 257 -------------KVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKV 303
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+F S+L AC+ +L G LH IK+ + + V N LI MY +CGS+ ++ ++F+
Sbjct: 304 SFASILGACTNPNDLGEGLKLHAYIKQAG-LEQEVLVGNALISMYSRCGSLANARQVFDN 362
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ N TW A+I+ G G + A FR ME GF+PD+ ++L C + G
Sbjct: 363 LRSLNRTTWNAMIAGYG-EGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRG 421
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
EL ++ S G + ++ ++ + + G +EA K+ MP N + W F+ C
Sbjct: 422 KELHSQI-ASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMP-ERNVISWNAFISCCC 479
Query: 653 RCRIAK 658
R + K
Sbjct: 480 RHDLGK 485
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 197/659 (29%), Positives = 328/659 (49%), Gaps = 58/659 (8%)
Query: 18 RCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVLKNGLFCADA 75
R + +A+ ++ MI G +P F F LL D + G Q+ A V K G
Sbjct: 70 RSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSV 129
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
V L+ LY + G V VF+ + ++ V+WNS++S E + F ++
Sbjct: 130 TVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDE 189
Query: 136 EVALTESSFVGVIHGLSN---EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
+V + + V V SN + L G+Q+H ++ G + + N+LV MY + +
Sbjct: 190 DVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKL 248
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
S++ + E RD+V+WNT++ +L ++E F +ALE M ++ V P+ T V+ +C
Sbjct: 249 ASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPAC 308
Query: 253 AGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
+ L+ GK +HA +KN +L+ + FVGSALVD Y C + F + ++ I W
Sbjct: 309 SHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLW 368
Query: 312 NALILGYASKS-SPTSIFLLIELLQ-LGYRPNEFTFSHVL----RSSLAFQLLQLHCLII 365
NA+I GYA ++ L IE+ + G N T + V+ RS + +H ++
Sbjct: 369 NAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVV 428
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
+ G + +V +LM +Y+R G+ +
Sbjct: 429 KRGLDRDRFVQNALMD--------------------------------MYSRLGKIDIAK 456
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM---------RAARI--YPDNYTF 474
++ ++E D+V+WN +I + +++ L + M RA+R+ P++ T
Sbjct: 457 RIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITL 516
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+++L +C+ L LA G +H K + ++D V + L+DMY KCG + S K+F+++
Sbjct: 517 MTILPSCAALSALAKGKEIHAYAIKNNL-ATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 575
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
RNVITW ++ A G++G +Q A++ R M G KP+ V I+V AC H G+V EG++
Sbjct: 576 IRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLK 635
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFP-PNALIWRTFLEGCQ 652
+F M + YGVEP DHY CVVDLL R G +KEA ++I +P A W + L C+
Sbjct: 636 IFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACR 694
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 140/569 (24%), Positives = 265/569 (46%), Gaps = 57/569 (10%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGL-LSCDSLNPVE---- 57
+RN VS+NS+IS+ E AL F M++ EP+ FT + L+C + E
Sbjct: 157 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLM 216
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ A L+ G ++F+ L+ +YG+ G L + + LVTWN+++S
Sbjct: 217 GKQVHAYGLRKGEL--NSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLC 274
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYEL 176
++ + + E+V V + V+ S+ + L G+++H +KNG D
Sbjct: 275 QNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 334
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V ++LV+MY C + S ++F + R + WN +I A++E +AL L++ M
Sbjct: 335 FVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEES 394
Query: 237 I-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ N TT V+ +C ++IH V+K L+ D FV +AL+D Y++ ++
Sbjct: 395 AGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDI 454
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL------------GYRPNEF 343
A F ++ ++++V+WN +I GY L++ +Q+ +PN
Sbjct: 455 AKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSI 514
Query: 344 TFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
T +L S A L G E + Y + K+ L +D
Sbjct: 515 TLMTILPSCAALSALA-------KGKEIHAYAI--------KNNLATD------------ 547
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
V + + +Y + G + K+ Q+ ++++WN+++ A +G+ ++ +++ + M
Sbjct: 548 -VAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMM 606
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCG 521
+ P+ TF+S+ +ACS + G + +KK + SSD + C ++D+ G+ G
Sbjct: 607 VQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYAC--VVDLLGRAG 664
Query: 522 SIGSSVKIFNEMTDRN---VITWTALISA 547
+ + ++ N + RN W++L+ A
Sbjct: 665 RVKEAYQLIN-LIPRNFDKAGAWSSLLGA 692
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 200/445 (44%), Gaps = 33/445 (7%)
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
W ++ + S +A+ Y+ M V + P+ F ++ + A LQ+ LGK IHA V
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 270 KNALECD-VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSI 327
K D V V + LV+ Y KC + + F IS +N VSWN+LI S + ++
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
+L P+ FT V + F + + + MG + + Y L + G
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPE----GLLMGKQVHAYGL--------RKG 228
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
++ +F+ N + +Y + G+ + LL E D+V+WN V+++
Sbjct: 229 ELN---SFII-----------NTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLC 274
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
N + E LE + M + PD +T S+L ACS L L G LH K + ++
Sbjct: 275 QNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 334
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM-EF 566
FV + L+DMY C + S ++F+ M DR + W A+I+ N + + AL F EM E
Sbjct: 335 FVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEES 394
Query: 567 LGFKPDRVALIAVLTAC-RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G + + V+ AC R G ++ E G++ + + ++D+ R G +
Sbjct: 395 AGLLANSTTMAGVVPACVRSGAFSKK--EAIHGFVVKRGLDRDRFVQNALMDMYSRLGKI 452
Query: 626 KEAEKIITTMPFPPNALIWRTFLEG 650
A++I M + + W T + G
Sbjct: 453 DIAKRIFGKME-DRDLVTWNTIITG 476
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 135/267 (50%), Gaps = 15/267 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLL-SCDSLNPVEG 58
M DR + +N++I+ Y++ Y E+AL +F+ M + G T G++ +C
Sbjct: 360 MFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSK 419
Query: 59 AQ-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+ + V+K GL D FV AL+ +Y R G +D +F M + LVTWN+I++ +
Sbjct: 420 KEAIHGFVVKRGLD-RDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYV 478
Query: 118 KHGFVEDCMFLFCELV---------RSEVALTESS--FVGVIHGLSNEQDLEFGEQIHGL 166
ED + + ++ S V+L +S + ++ + L G++IH
Sbjct: 479 FSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 538
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
IKN ++ V ++LV+MY +C + + K+F + IR+V++WN I+ A N A
Sbjct: 539 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDA 598
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCA 253
+++ M V V PN+ TF+ V +C+
Sbjct: 599 IDMLRMMMVQGVKPNEVTFISVFAACS 625
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 7/235 (2%)
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
Y K +SQ P+ W ++ + + +E + + M I PDN+ F +LL A
Sbjct: 45 YGAPSKFISQSHSPEW--WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKA 102
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
+ L ++ LG +H + K V N L+++Y KCG G+ K+F+ +++RN ++
Sbjct: 103 VADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVS 162
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W +LIS+L + ALE FR M +P L++V AC + + EG+ L +
Sbjct: 163 WNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPM-PEGL-LMGKQV 220
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHL-KEAEKIITTMPFPPNALI-WRTFLEG-CQ 652
+YG+ + + L+ YG + K A + F L+ W T L CQ
Sbjct: 221 HAYGLRKGELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQ 275
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
+P RNV+++N I+ AY G +DA+ M M+ +G +P + TF + + S + + EG
Sbjct: 574 IPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEG 633
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK--SLVTWNSIVSIF 116
++ ++ K+ + ++ L GR G + E + +PR W+S++
Sbjct: 634 LKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGAC 693
Query: 117 GKHGFVE 123
H +E
Sbjct: 694 RIHNNLE 700
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 179/499 (35%), Positives = 269/499 (53%), Gaps = 38/499 (7%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
++ V+ S + +G+ +H VIK+GF +++V +S V MY +C A K+F ++
Sbjct: 300 TYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEM 359
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
RDV SWN +I + KALEL+ M V P+ T VI+SCA L + GK
Sbjct: 360 PERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGK 419
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK- 321
IH +++++ D FV SALVD Y KC LE A F +I KN+VSWN++I GY+ K
Sbjct: 420 EIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKG 479
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVLRS---SLAFQLLQ-LHCLIIRMGYENYEYVLG 377
S + I L + + G RP T S +L + S+ QL + +H IIR E +V
Sbjct: 480 DSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNS 539
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
SL+ Y K G I A E V + + ++V
Sbjct: 540 SLIDLYFKCGNIGSA------------------------------ENV--FQNMPKTNVV 567
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SWN++I+ G Y E L +F MR A + PD TF S+L ACS+L L G +H I
Sbjct: 568 SWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFI 627
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
++++ + V L+DMY KCG++ ++ IFN++ +R+ ++WT++I+A G +G A A
Sbjct: 628 IESKL-EINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEA 686
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
L+ F +M+ KPD+V +A+L+AC H GLV EG F +M YG +P ++HY C++D
Sbjct: 687 LKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLID 746
Query: 618 LLVRYGHLKEAEKIITTMP 636
LL R G L+EA +I+ P
Sbjct: 747 LLGRVGRLREAYEILQRTP 765
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 155/562 (27%), Positives = 283/562 (50%), Gaps = 53/562 (9%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGF-EPTQFTFGGLL-SCDSLNPVE-GAQL 61
++ +N +++A ++ + L +F +++ + +P FT+ +L +C L V G +
Sbjct: 261 DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 320
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V+K+G F D V ++ +G+Y + ++ + +F++MP + + +WN+++S + + G
Sbjct: 321 HTHVIKSG-FAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 379
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E + LF E+ S + VI + DLE G++IH ++++GF + V+++
Sbjct: 380 PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSA 439
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
LV+MY +C + A+++F+ ++ ++VVSWN++I + + +EL+ RM + + P
Sbjct: 440 LVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPT 499
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TT ++ +C+ N LGK IH +I+N +E D+FV S+L+D Y KC N+ A F
Sbjct: 500 LTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQ 559
Query: 302 EISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
+ N+VSWN +I GY S ++ + ++ + G +P+ TF+ VL + +L
Sbjct: 560 NMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEK 619
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
++H II E E V+G+L+ YAK G + +AL
Sbjct: 620 GKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEAL----------------------- 656
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ +QL D VSW +IAA +G E L+LF+ M+ + PD TF++
Sbjct: 657 ---------HIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLA 707
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM-----LIDMYGKCGSIGSSVKIFN 531
+LSACS G G ++I+ F + LID+ G+ G + + +I
Sbjct: 708 ILSACSH-----AGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQ 762
Query: 532 EMTD--RNVITWTALISALGLN 551
D +V + L SA L+
Sbjct: 763 RTPDIREDVGLLSTLFSACHLH 784
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/489 (29%), Positives = 237/489 (48%), Gaps = 49/489 (10%)
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGAL 217
G+ IH ++ G + + SL+N+YF C SA+ +F+ +E D+ WN ++ A
Sbjct: 213 LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAAC 272
Query: 218 AESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
++ F + LE++ R+ + P+ T+ V+ +C+GL GK +H VIK+ D
Sbjct: 273 TKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMD 332
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
V V S+ V YAKC+ E A F E+ +++ SWN +I Y P L E +++
Sbjct: 333 VVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKV 392
Query: 337 -GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
G++P+ T + V+ S L+ +H ++R G+ A G +S
Sbjct: 393 SGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGF--------------ALDGFVSS 438
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
AL +Y + G ++ Q++R ++VSWN +IA + GD
Sbjct: 439 ALV------------------DMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGD 480
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
K +ELF+ M I P T S+L ACS+ NL LG +HG I + + +D FV +
Sbjct: 481 SKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRV-EADIFVNS 539
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
LID+Y KCG+IGS+ +F M NV++W +IS G AL F +M G KP
Sbjct: 540 SLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKP 599
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV----VDLLVRYGHLKE 627
D + +VL AC ++ +G E+ ++ +E +++ V +D+ + G + E
Sbjct: 600 DAITFTSVLPACSQLAVLEKGKEI-----HNFIIESKLEINEVVMGALLDMYAKCGAVDE 654
Query: 628 AEKIITTMP 636
A I +P
Sbjct: 655 ALHIFNQLP 663
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 202/354 (57%), Gaps = 4/354 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+R+V S+N++IS Y + G E AL +F M GF+P T ++S C L +E G
Sbjct: 359 MPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERG 418
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ ++++G F D FV +AL+ +YG+ GCL+ VFE + RK++V+WNS+++ +
Sbjct: 419 KEIHMELVRSG-FALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSL 477
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + C+ LF + + T ++ ++ S +L+ G+ IHG +I+N + ++ V
Sbjct: 478 KGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFV 537
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+SL+++YF+C I SAE +F+++ +VVSWN +I + ++ +AL ++ M V
Sbjct: 538 NSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGV 597
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ TF V+ +C+ L GK IH +I++ LE + V AL+D YAKC ++ A
Sbjct: 598 KPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALH 657
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRS 351
F+++ ++ VSW ++I Y S L E +Q +P++ TF +L +
Sbjct: 658 IFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSA 711
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 201/406 (49%), Gaps = 56/406 (13%)
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-NIVSWNALILG 317
+LGK IH K++ L+ ++ + +L++ Y C + A L F I N +I WN L+
Sbjct: 212 LLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLM-- 269
Query: 318 YASKSSPTSIFLLIELLQLGYR--------PNEFTFSHVLRSSLAFQLLQLHCLIIRMGY 369
++ T F+ IE L++ +R P+ FT+ VL++ R+GY
Sbjct: 270 ----AACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG---------RVGY 316
Query: 370 ENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
G ++ ++ KSG D + +A+ G+Y + + + +KL
Sbjct: 317 -------GKMVHTHVIKSGFAMDVVVMSSAV-------------GMYAKCNVFEDAIKLF 356
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
++ D+ SWN VI+ +G ++ LELF+ M+ + PD+ T +++S+C++L +L
Sbjct: 357 DEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLE 416
Query: 489 LGSSLHGLIKKTEIISS----DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
G +H E++ S D FV + L+DMYGKCG + + ++F ++ +NV++W ++
Sbjct: 417 RGKEIH-----MELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSM 471
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I+ L G ++ +E FR M+ G +P L ++L AC ++ G + + R+
Sbjct: 472 IAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNR- 530
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
VE ++ ++DL + G++ AE + MP N + W + G
Sbjct: 531 VEADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNVVSWNVMISG 575
>gi|302801912|ref|XP_002982712.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
gi|300149811|gb|EFJ16465.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
Length = 734
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 190/660 (28%), Positives = 328/660 (49%), Gaps = 51/660 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
+ D+N +N +IS Y+R G +AL +F M P F F L +C L +E G
Sbjct: 75 IADKNDFVWNLMISGYARSGKNREALELFHKM---DIPPNGFIFASALAACAGLGDLEQG 131
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ VL++ +D V +L+ +Y R G + E + +F+ MPRK+LV+WN+++S F +
Sbjct: 132 REIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQ 191
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ E + L+ + R + F ++ ++ +L+ G IH + G ++++
Sbjct: 192 CDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQRDIVM 251
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+NMY +C + A ++F + RDV +W ++I A+ +A Y RM D V
Sbjct: 252 ENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDRMRRDCV 311
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P TFV ++++C+ L+ GK +H +V E V +AL+ Y++C +LE A
Sbjct: 312 SPTSATFVALLSACSTLEQ---GKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEF 368
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+++ K+ VSW+A++ +A P ++ L +++ G + + TF L++ +
Sbjct: 369 LFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRD 428
Query: 358 LQLHCLIIRM----GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+L I + G + + + L+++Y+K
Sbjct: 429 SRLSKTIRELIDWSGIDKMDSIRADLVSAYSK---------------------------- 460
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
G E K+ ++E D+++W ++I A GD K LELF M+ + PD+ T
Sbjct: 461 ----CGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVT 516
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F S+L ACS NL G +H I + F+ N LI+MY +CGS+ + +IF M
Sbjct: 517 FSSVLQACS---NLEDGREVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESM 573
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+ I+W+A+++ +G ++ +R M G PD V LIA+L +C H GL E
Sbjct: 574 DRSSRISWSAIMTLCARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEAC 633
Query: 594 ELFERMNRSYGVEPEMD-HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F + + + P +D HY C+VDLL R G L EAE++I +M P+ + T L C+
Sbjct: 634 HYFTWIISDFEL-PHLDEHYQCMVDLLCRAGRLDEAEELI-SMIDRPDVVTLNTMLAACK 691
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 161/611 (26%), Positives = 290/611 (47%), Gaps = 52/611 (8%)
Query: 50 CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
C N EG +L + ++G + +++ ++ +Y + GCL + + F+++ K+ W
Sbjct: 25 CSRRNVSEGRRLHDDLRRSG-YGDSSYLRRCVVQMYAKCGCLADAKAAFDEIADKNDFVW 83
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
N ++S + + G + + LF ++ +S + GL DLE G +IH V++
Sbjct: 84 NLMISGYARSGKNREALELFHKMDIPPNGFIFASALAACAGLG---DLEQGREIHKRVLE 140
Query: 170 N-GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
+ +++V NSLV MY +C + K+F + +++VSWN +I A + + +ALE
Sbjct: 141 SRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDYPEQALE 200
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
LY RM + + PN F ++ +CA L N LG SIH ++ L+ D+ + +AL++ Y+
Sbjct: 201 LYHRMKRERLEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQRDIVMENALINMYS 260
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
KC ++ A FS ++ +++ +W ++I GYA QLG+ F F
Sbjct: 261 KCGCMDEALEVFSGLATRDVFTWTSMIAGYA---------------QLGFGSEAFAFYDR 305
Query: 349 LR------SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
+R +S F L C + G +E V A
Sbjct: 306 MRRDCVSPTSATFVALLSACSTLEQGKHLHEE---------------------VKAFGFE 344
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
V + +Y+R G + L +++++ D VSW+ ++ + A GD + L LF+ M
Sbjct: 345 SITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQM 404
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ TF S L ACS + L ++ LI + I D+ + L+ Y KCG
Sbjct: 405 ILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRAD-LVSAYSKCGD 463
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ + KIF+ M R+V+TWT +I G ++ ALE F M+ G +PD V +VL A
Sbjct: 464 MEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQA 523
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C + + +G E+ R+ + G + + ++++ R G +++A +I +M + +
Sbjct: 524 CSN---LEDGREVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMD-RSSRI 579
Query: 643 IWRTFLEGCQR 653
W + C R
Sbjct: 580 SWSAIMTLCAR 590
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 144/527 (27%), Positives = 247/527 (46%), Gaps = 54/527 (10%)
Query: 135 SEVALTESS---FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
S AL ES + ++ + +++ G ++H + ++G+ + +V MY +C
Sbjct: 5 SGAALKESEVSRYARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGC 64
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
+ A+ F ++ ++ WN +I A S +ALEL+ +M + PN F + +
Sbjct: 65 LADAKAAFDEIADKNDFVWNLMISGYARSGKNREALELFHKMDIP---PNGFIFASALAA 121
Query: 252 CAGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDN-LEGAHLCFSEISNKNIV 309
CAGL + G+ IH +V+++ ++ DV V ++LV YA+C + LEG + F + KN+V
Sbjct: 122 CAGLGDLEQGREIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKI-FDAMPRKNLV 180
Query: 310 SWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGY 369
SWNA+I + P Q L+L+ + R
Sbjct: 181 SWNAMISAFVQCDYPE------------------------------QALELYHRMKRERL 210
Query: 370 ENYEYVLGSLMTSYAKSG---LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
E +V SL+T+ A G L S +T+L + R +V N + +Y++ G +E ++
Sbjct: 211 EPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQRDIVMENALINMYSKCGCMDEALE 270
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+ S L D+ +W +IA A G E + MR + P + TFV+LLSACS
Sbjct: 271 VFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDRMRRDCVSPTSATFVALLSACS---T 327
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L G LH +K S T V L+ MY +CGS+ + +F +M ++ ++W+A+++
Sbjct: 328 LEQGKHLHEEVKAFG-FESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVT 386
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
+ G +AL FR+M G + + L AC R + E ++ S G++
Sbjct: 387 SHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWS-GID 445
Query: 607 PEMDHYHCVVDLLVRY---GHLKEAEKIITTMPFPPNALIWRTFLEG 650
+MD DL+ Y G ++EA KI M + L W ++G
Sbjct: 446 -KMDSIR--ADLVSAYSKCGDMEEARKIFDRME-SRDVLTWTVMIKG 488
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 215/455 (47%), Gaps = 44/455 (9%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQ 62
R+V ++ S+I+ Y++ G+ +A + M PT TF LLS C +L +G L
Sbjct: 278 RDVFTWTSMIAGYAQLGFGSEAFAFYDRMRRDCVSPTSATFVALLSACSTLE--QGKHLH 335
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
V G F + V TAL+ +Y R G L++ +F M +K V+W+++V+ + G
Sbjct: 336 EEVKAFG-FESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDP 394
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ LF +++ + L+ +F + S ++D + I L+ +G D + L
Sbjct: 395 GKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADL 454
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
V+ Y +C + A K+F +E RDV++W +I A+ + ALEL+ RM + V P+
Sbjct: 455 VSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDS 514
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TF V+ +C+ L++ G+ +HA+++ + F+G+ L++ YA+C ++ A F
Sbjct: 515 VTFSSVLQACSNLED---GREVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFE 571
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLLQL 360
+ + +SW+A++ A I L+ G P+ T
Sbjct: 572 SMDRSSRISWSAIMTLCARHGQHDDIIDTYRLMVNEGVVPDGVT---------------- 615
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF----VTALNIPRAVVPANIIAGIYN 416
L +++ S + +GL +A + ++ +P + +
Sbjct: 616 ---------------LIAILNSCSHAGLTDEACHYFTWIISDFELPHLDEHYQCMVDLLC 660
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
R G+ +E +L+S ++RPD+V+ N ++AAC + D
Sbjct: 661 RAGRLDEAEELISMIDRPDVVTLNTMLAACKNQQD 695
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 114/238 (47%), Gaps = 10/238 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M R+V+++ +I Y++ G + AL +F M G EP TF +L +C +L +G
Sbjct: 474 MESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSNLE--DGR 531
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ A +L F+G L+ +Y R G + + +FE M R S ++W++I+++ +H
Sbjct: 532 EVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTLCARH 591
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G +D + + +V V + + +++ S+ + +I D+EL
Sbjct: 592 GQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEACHYFTWIIS---DFELPHL 648
Query: 180 NS----LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ +V++ + + AE++ ++ DVV+ NT++ A ++ + +M
Sbjct: 649 DEHYQCMVDLLCRAGRLDEAEELISMIDRPDVVTLNTMLAACKNQQDLHRGARTAAQM 706
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 198/687 (28%), Positives = 336/687 (48%), Gaps = 47/687 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
RN+VS+ SIIS ++ G A+ +F M G P + TF +L +C VE G
Sbjct: 286 RNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQGVAF 345
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVT-WNSIVSIFGKHG 120
S++ D ++ + GR G L E + D P + T W +++ K+G
Sbjct: 346 FKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYG 405
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE----QDLEFGEQIHGLV-----IKNG 171
VE E ++ E F G LSN + E + LV +K+
Sbjct: 406 EVE-----MGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRNSVKSF 460
Query: 172 FDYELLVANSLVNMYFQCAGIWS---------------------AEKMFKDVEIRDVVSW 210
F+ + A ++ Y+ +G+++ A K+F +E W
Sbjct: 461 FNIVRMEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLW 520
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
N +I LA+S+ A+ Y + + P+ TF +++ +CA + G+ +H + K
Sbjct: 521 NILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITK 580
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLL 330
L D+FV ++L+ YA C NL A F E+ K++VSWN+LI GY+ + I L
Sbjct: 581 LGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILAL 640
Query: 331 IELLQ-LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY-----EYVLGSLMTSYA 384
+L+Q G + ++ T V+ + + ++R E+Y Y+ +L+ +
Sbjct: 641 FKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRY-IEDYCIEVDVYLGNTLVDYFG 699
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
+ G + A + + R +V N + Y + K+ Q+ + D++SW+ +I+
Sbjct: 700 RRGQLQSAEKVFFNMKV-RNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMIS 758
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
+ + + LE+F+ M+ A++ PD S++S+C+ L L LG +H +++ I
Sbjct: 759 GYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNI-K 817
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
+DT + N LIDMY KCGS ++++F EM +++ ++W ++I L NGF + +L F+ M
Sbjct: 818 ADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAM 877
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
GF+P+ V + VL AC + LV EG++ FE M R Y +EP+M HY CVVDLL R G
Sbjct: 878 LTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQ 937
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEGC 651
L++A + IT MP P+ ++WR L C
Sbjct: 938 LEKALRFITEMPIDPDPVVWRILLGSC 964
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 194/363 (53%), Gaps = 7/363 (1%)
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
+ L ++ ++ W+AL+ Y+ P L + + + F+ L++
Sbjct: 43 SQLIAHQVFDRRPTPWHALLKAYSHGPHPQDALQLFRHARWHAADDTYAFTFALKACAGL 102
Query: 356 QL----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+QLH L++R G+E YV +L+ Y G ++D+ + + AV +I
Sbjct: 103 GWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVI 162
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
G + G+ L ++ ++VSW+ +I E + LF+ M A I P
Sbjct: 163 TG-FAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSE 221
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
T ++++ A S + + +G +LHG +K ++ D V N LID+Y K GSI +S+++F+
Sbjct: 222 ITVLAVVPALSNVGKILIGEALHGYCEKEGLVW-DVRVGNSLIDLYAKIGSIQNSLRVFD 280
Query: 532 EMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
EM DR N+++WT++IS ++G + +A+E F +M G +P+R+ ++VL AC HGGLV
Sbjct: 281 EMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVE 340
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+G+ F+ M Y + P++ H+ C++D+L R G L+EAE+II P NA +WRT L
Sbjct: 341 QGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGC 400
Query: 651 CQR 653
C +
Sbjct: 401 CSK 403
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 180/686 (26%), Positives = 308/686 (44%), Gaps = 76/686 (11%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPT-QFTFGGLLSCDSLN-PVEGAQ 60
DR +++++ AYS + +DAL++F + + T FTF L +C L P Q
Sbjct: 52 DRRPTPWHALLKAYSHGPHPQDALQLFRHARWHAADDTYAFTFA-LKACAGLGWPRCCMQ 110
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L V++ G F +V TAL+ +Y GCL + FE+MP K+ V+WN +++ F G
Sbjct: 111 LHGLVVRKG-FEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVITGFAGWG 169
Query: 121 FVE-------------------------------DCMFLFCELVRSEVALTESSFVGVIH 149
VE + + LF ++ ++ +E + + V+
Sbjct: 170 EVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVVP 229
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKD-VEIRDVV 208
LSN + GE +HG K G +++ V NSL+++Y + I ++ ++F + ++ R++V
Sbjct: 230 ALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLV 289
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA--GL--QNSILGKSI 264
SW +II A KA+EL+ M + PN+ TF+ V+++C+ GL Q KS+
Sbjct: 290 SWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQGVAFFKSM 349
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-NIVSWNALILGYASKSS 323
+ + + DV ++D + L A + + N W L LG SK
Sbjct: 350 ---IYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTL-LGCCSKYG 405
Query: 324 PTSI--FLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL-HCLIIRMGYENYEYV----- 375
+ + ++L L EF V+ S++ +L + I+R + V
Sbjct: 406 EVEMGERTMKKILAL---EREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRNSVKSFFN 462
Query: 376 ------LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
+ L Y SGL + A L + P + A K+
Sbjct: 463 IVRMEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAH------------KVFD 510
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
Q+E P WNI+I A + + + +K + + PDN TF +L AC+++ L
Sbjct: 511 QIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNE 570
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G +H I K ++ SD FV N LI +Y CG++ + +F+EM ++V++W +LI
Sbjct: 571 GEQMHNHITKLGLL-SDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYS 629
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
+ L F+ M+ G K D+V +I V++AC G + R Y +E ++
Sbjct: 630 QCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMA-DYMVRYIEDYCIEVDV 688
Query: 610 DHYHCVVDLLVRYGHLKEAEKIITTM 635
+ +VD R G L+ AEK+ M
Sbjct: 689 YLGNTLVDYFGRRGQLQSAEKVFFNM 714
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 174/722 (24%), Positives = 315/722 (43%), Gaps = 114/722 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
MP RNVVS++ +I Y+R +A+ +F M+ G P++ T L +L+ V
Sbjct: 181 MPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITV--LAVVPALSNVGKIL 238
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM-PRKSLVTWNSIVSI 115
G L K GL D VG +L+ LY + G + + VF++M R++LV+W SI+S
Sbjct: 239 IGEALHGYCEKEGLVW-DVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLVSWTSIISG 297
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN----EQDLEFGEQIHGLVIKNG 171
F HG + LF ++ R+ + +F+ V+H S+ EQ + F ++ +
Sbjct: 298 FAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQGVAF---FKSMIYEYN 354
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKD--VEIRDVVSWNTIIGALAE-------SEN 222
+ ++ +++M + + AE++ +D VE+ V W T++G ++
Sbjct: 355 INPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATV-WRTLLGCCSKYGEVEMGERT 413
Query: 223 FGKALELYLRMSVD-IVFPNQTTFVY------VINSCAGLQNSILG----------KSIH 265
K L L D +V N T + ++ +NS+ K +H
Sbjct: 414 MKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRNSVKSFFNIVRMEAIKRLH 473
Query: 266 AKVIKNAL-ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
A I + L C + L + +L AH F +I WN LI G A +P
Sbjct: 474 AYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAP 533
Query: 325 TSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSL 379
+ Q G P+ TF +L++ L Q+H I ++G + +V SL
Sbjct: 534 ADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSL 593
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+ YA G + Y R+ + ++ D+VSW
Sbjct: 594 IHLYAACGNLC------------------------YARS--------VFDEMVVKDVVSW 621
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
N +I + +K++L LFK M+ + D T + ++SAC++L + ++ + I+
Sbjct: 622 NSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIED 681
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG---------- 549
I D ++ N L+D +G+ G + S+ K+F M RN++T A+I+A
Sbjct: 682 Y-CIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARK 740
Query: 550 ----------------LNGFAQ-----RALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
++G++Q ALE FR+M+ KPD + + +V+++C H G
Sbjct: 741 IFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGA 800
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ G + E + R+ ++ + + ++D+ ++ G KEA ++ M + L W + +
Sbjct: 801 LDLGKWVHEYVRRN-NIKADTIMENSLIDMYMKCGSAKEALQVFKEMK-EKDTLSWNSII 858
Query: 649 EG 650
G
Sbjct: 859 IG 860
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 221/480 (46%), Gaps = 67/480 (13%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQASVL 66
+N +I ++ DA+ + G P TF +L +C +N + EG Q+ +
Sbjct: 520 WNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHIT 579
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K GL +D FV +L+ LY G L SVF++M K +V+WNS++ + + +D +
Sbjct: 580 KLGLL-SDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDIL 638
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
LF + V + + + V+ + D + + + + ++ + N+LV+ +
Sbjct: 639 ALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYF 698
Query: 187 FQCAGIWSAEKMFKDVEIR-------------------------------DVVSWNTIIG 215
+ + SAEK+F ++++R D++SW+++I
Sbjct: 699 GRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMIS 758
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+++ +F ALE++ +M V P+ V++SCA L LGK +H V +N ++
Sbjct: 759 GYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKA 818
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELL 334
D + ++L+D Y KC + + A F E+ K+ +SWN++I+G A+ S+ L +L
Sbjct: 819 DTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAML 878
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV--LGSLMTSYAKSGLISDA 392
G+RPN TF VL + +L++ G +++E + L SL G + D
Sbjct: 879 TEGFRPNGVTFLGVLIACANAKLVE-------EGLDHFESMKRLYSLEPQMKHYGCVVDL 931
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
L R GQ + ++ ++++ PD V W I++ +C +GD
Sbjct: 932 LG----------------------RAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGD 969
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 122/623 (19%), Positives = 246/623 (39%), Gaps = 104/623 (16%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
VF+ P W++++ + +D + LF R A +F + +
Sbjct: 49 QVFDRRP----TPWHALLKAYSHGPHPQDALQLF-RHARWHAADDTYAFTFALKACAGLG 103
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
Q+HGLV++ GF+++ V +LVN+Y C + + F+++ +++ VSWN +I
Sbjct: 104 WPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVIT 163
Query: 216 ALA---ESE----------------------------NFGKALELYLRMSVDIVFPNQTT 244
A E E +A+ L+ RM + + P++ T
Sbjct: 164 GFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEIT 223
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE-I 303
+ V+ + + + ++G+++H K L DV VG++L+D YAK +++ + F E +
Sbjct: 224 VLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEML 283
Query: 304 SNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHC 362
+N+VSW ++I G+A S ++ L ++ + G RPN TF VL +
Sbjct: 284 DRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHAC---------- 333
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL----NIPRAVVPANIIAGIYNRT 418
+ GL+ +AF ++ NI V I + R
Sbjct: 334 ---------------------SHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRA 372
Query: 419 GQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRA-ARIYPDNYTFVS 476
G+ E +++ + W ++ C+ G+ + K + A R + + FV
Sbjct: 373 GRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEVEMGERTMKKILALEREFGGD--FVV 430
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM----------LIDMYGKCGSIGSS 526
L + ++L + + L+ + + S + M ++ C S
Sbjct: 431 LSNMLTELRRFSDAEIVRKLVDQRNSVKSFFNIVRMEAIKRLHAYYIVSGLYNCHYAMSK 490
Query: 527 V---------------KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
V K+F+++ W LI L + A+ +++ + G P
Sbjct: 491 VLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVP 550
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D + +L AC + EG ++ + + G+ ++ + ++ L G+L A +
Sbjct: 551 DNLTFPFILKACARINALNEGEQMHNHITK-LGLLSDIFVSNSLIHLYAACGNLCYARSV 609
Query: 632 ITTMPFPPNALIWRTFLEGCQRC 654
M + + W + + G +C
Sbjct: 610 FDEM-VVKDVVSWNSLICGYSQC 631
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEGA 59
M +++ +S+NSII + G+ +++L +F M+ GF P TF G L++C + VE
Sbjct: 846 MKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEG 905
Query: 60 QLQASVLKNGLFCADAFVGT--ALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIF 116
+K L+ + + ++ L GR G L++ + +MP V W ++
Sbjct: 906 LDHFESMKR-LYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSC 964
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
HG V E+V ++ E S G LSN
Sbjct: 965 NTHGDVA-----IAEIVTKKLNELEPSNSGNYTLLSN 996
>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
Length = 941
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 191/679 (28%), Positives = 327/679 (48%), Gaps = 54/679 (7%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQ 62
+V+S+++ I+AY G +A++ F M G +P T +L +C ++ E G ++
Sbjct: 278 SVISWSAFIAAY---GQHWEAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIH 334
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
A VL G + + V A LY + + + VF +P K V+WN+IVS + K G
Sbjct: 335 ALVLA-GPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLF 393
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLS---------NEQDLEFGEQIHGLVIKNGFD 173
D +FL ++ + +F+ +++ S N + L G Q+H +I NG D
Sbjct: 394 RDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLD 453
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ + N LV MY +C + A F+ + R+V SW +I L ++ + LEL M
Sbjct: 454 GDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSM 513
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
++ N+ TF+ ++ +C+ + LGK+IH ++ LE D+ +AL++ Y C++L
Sbjct: 514 DLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALLNMYTTCESL 573
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSS 352
+ A L F + +++VSW +I YA P L ++ + RP+ T VL +
Sbjct: 574 DEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEAC 633
Query: 353 LAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ + L +H I+ G E +V ++++ Y K + DA
Sbjct: 634 ASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDAR--------------- 678
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
++ ++ DIV WN +I A A N ++ L+ M ++
Sbjct: 679 -----------------QVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMP 721
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC-GSIGSSV 527
P++ T ++LL +CS C + GSSLH +S T V N LI+MY KC G++ ++
Sbjct: 722 PNDVTLITLLDSCSSTCKMERGSSLHREAAARGYLS-HTSVVNALINMYAKCCGNLEAAQ 780
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
F + +NV++W+++++A NG RA F M G P+ V +VL AC H G
Sbjct: 781 TAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAG 840
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
L EG F M + +EP +HY C+V+LL + G +K+A ++ MP P+A WR+
Sbjct: 841 LADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSL 900
Query: 648 LEGCQRCRIAKYDTLNSTK 666
L C+ +Y L + +
Sbjct: 901 LGACEVHTDKEYGALAAKQ 919
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 182/612 (29%), Positives = 311/612 (50%), Gaps = 27/612 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP+R+++S+N++I+ Y++ + A++++ Y G +P + TF LL +C + ++
Sbjct: 71 MPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLKFG 130
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ F +D V L+ +Y G LD+ +VFE R + TW ++++ + +H
Sbjct: 131 RMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRH 190
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G +E + ++ + + E +F+ V+ S+ + LE G+ +H L + +G D+ L +
Sbjct: 191 GKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRME 250
Query: 180 NSLVNMYFQCA-GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY +C+ A ++F + V+SW+ I A + K EL M+++ V
Sbjct: 251 NSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHWEAIKTFEL---MNLEGV 307
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN TT V+ +CA + G+ IHA V+ + V +A YAKC + A
Sbjct: 308 KPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASR 367
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
FS I K+ VSWNA++ YA + +IFL ++ G+ P++ TF +L S L
Sbjct: 368 VFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSAL 427
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
L+ Y N + + S +IS+ L T L N++ +Y R
Sbjct: 428 LK--------QYGNSKSLTDGRQV---HSQMISNGLDGDTYL--------GNLLVQMYGR 468
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G ++ + + ++ SW I+I+ NG+ E LEL K M + TF+SL
Sbjct: 469 CGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISL 528
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L ACS +L+LG ++H I+ T+ + SD N L++MY C S+ + +F M R+
Sbjct: 529 LGACSVTGDLSLGKTIHERIR-TKGLESDIITSNALLNMYTTCESLDEARLVFERMVFRD 587
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
V++WT +ISA G+ AL+ +R ME +PD V LI+VL AC + EG + E
Sbjct: 588 VVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHE 647
Query: 598 RMNRSYGVEPEM 609
R+ S GVE ++
Sbjct: 648 RIVAS-GVETDV 658
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 153/603 (25%), Positives = 289/603 (47%), Gaps = 50/603 (8%)
Query: 49 SCDSL-NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV 107
+C +L + ++G Q+ A +L +GL A + +L+ +YG+ G ++E + F+ MP + L+
Sbjct: 19 ACAALGDSLQGKQIHARILSSGL-GASVLLSNSLVYMYGKCGSVEEARNAFDRMPERDLI 77
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLV 167
+WN++++++ +H + + L+ E +F +++ DL+FG +H
Sbjct: 78 SWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLKFGRMLHEHF 137
Query: 168 IKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKAL 227
+ F + +V N L++MY C + A +F+ DV +W T+I A A
Sbjct: 138 LGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLECAF 197
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
+ +M + + N+ TF+ V+++C+ L+ GK +H + + L+ + + ++L+ Y
Sbjct: 198 ATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMY 257
Query: 288 AKCD-NLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFS 346
KC + + A F IS +++SW+A I Y F L+ L G +PN T +
Sbjct: 258 GKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHWEAIKTFELMNL--EGVKPNATTLT 315
Query: 347 HVLRSSLAF----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
VLR+ Q ++H L++ Y VL + + YAK ++DA
Sbjct: 316 SVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADA---------- 365
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
++ S + D VSWN +++A A G +++ + L + M
Sbjct: 366 ----------------------SRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQM 403
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI--------ISSDTFVCNMLI 514
+ PD+ TF+++L +CS+ L + L ++ + DT++ N+L+
Sbjct: 404 QVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLV 463
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
MYG+CGS+ + F + RNV +WT LIS L NG A LE + M+ G + +++
Sbjct: 464 QMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKI 523
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
I++L AC G + G + ER+ R+ G+E ++ + ++++ L EA +
Sbjct: 524 TFISLLGACSVTGDLSLGKTIHERI-RTKGLESDIITSNALLNMYTTCESLDEARLVFER 582
Query: 635 MPF 637
M F
Sbjct: 583 MVF 585
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 144/498 (28%), Positives = 248/498 (49%), Gaps = 48/498 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SC--------- 50
+P ++ VS+N+I+SAY++ G DA+ + M GF P TF +L SC
Sbjct: 372 IPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQY 431
Query: 51 -DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
+S + +G Q+ + ++ NGL D ++G L+ +YGR G LD+ + F+ + ++++ +W
Sbjct: 432 GNSKSLTDGRQVHSQMISNGLD-GDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSW 490
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
++S+ ++G + + L + + +F+ ++ S DL G+ IH +
Sbjct: 491 TILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRT 550
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
G + +++ +N+L+NMY C + A +F+ + RDVVSW II A A + +AL+L
Sbjct: 551 KGLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQL 610
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
Y RM + P+ T + V+ +CA L+ + GK+IH +++ + +E DVFVG+A+V FY K
Sbjct: 611 YRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGK 670
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLL-IELLQLGYRPNEFTFSHV 348
C+ +E A F I +K+IV WNA+I YA F L +E+++ PN+ T +
Sbjct: 671 CEAVEDARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITL 730
Query: 349 LRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
L S + ++ LH GY ++ V+ +L+ YAK
Sbjct: 731 LDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKC------------------ 772
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
G + ++VSW+ ++AA A NG+ LF M
Sbjct: 773 -------------CGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQ 819
Query: 465 ARIYPDNYTFVSLLSACS 482
+ P+ TF S+L ACS
Sbjct: 820 DGVLPNIVTFTSVLHACS 837
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 171/365 (46%), Gaps = 34/365 (9%)
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M ++ V ++ T + +++CA L +S+ GK IHA+++ + L V + ++LV Y KC +
Sbjct: 1 MDLEGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS 351
+E A F + ++++SWNA+I YA L +L G +P+E TF+ +L +
Sbjct: 61 VEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNA 120
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
A L+ RM +E++ L TS+ ++ + L
Sbjct: 121 CFASGDLKFG----RMLHEHF------LGTSFVSDQIVCNGL------------------ 152
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y+ G ++ + RPD+ +W VIAA +G + + M + +
Sbjct: 153 ISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLECAFATWSKMHQEGLRSNE 212
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK-IF 530
TF+++L CS L L G +H L + + S + N LI MYGKC + +F
Sbjct: 213 ITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFS-LRMENSLISMYGKCSRHPDEAREVF 271
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
++ +VI+W+A I+A G + A++ F M G KP+ L +VL AC G
Sbjct: 272 LRISRPSVISWSAFIAAYGQH---WEAIKTFELMNLEGVKPNATTLTSVLRACATVGAHE 328
Query: 591 EGMEL 595
+G +
Sbjct: 329 QGRRI 333
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 179/499 (35%), Positives = 269/499 (53%), Gaps = 38/499 (7%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
++ V+ S + +G+ +H VIK+GF +++V +S V MY +C A K+F ++
Sbjct: 108 TYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEM 167
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
RDV SWN +I + KALEL+ M V P+ T VI+SCA L + GK
Sbjct: 168 PERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGK 227
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK- 321
IH +++++ D FV SALVD Y KC LE A F +I KN+VSWN++I GY+ K
Sbjct: 228 EIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKG 287
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVLRS---SLAFQLLQ-LHCLIIRMGYENYEYVLG 377
S + I L + + G RP T S +L + S+ QL + +H IIR E +V
Sbjct: 288 DSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNS 347
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
SL+ Y K G I A E V + + ++V
Sbjct: 348 SLIDLYFKCGNIGSA------------------------------ENV--FQNMPKTNVV 375
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SWN++I+ G Y E L +F MR A + PD TF S+L ACS+L L G +H I
Sbjct: 376 SWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFI 435
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
++++ + V L+DMY KCG++ ++ IFN++ +R+ ++WT++I+A G +G A A
Sbjct: 436 IESKL-EINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEA 494
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
L+ F +M+ KPD+V +A+L+AC H GLV EG F +M YG +P ++HY C++D
Sbjct: 495 LKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLID 554
Query: 618 LLVRYGHLKEAEKIITTMP 636
LL R G L+EA +I+ P
Sbjct: 555 LLGRVGRLREAYEILQRTP 573
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 155/562 (27%), Positives = 283/562 (50%), Gaps = 53/562 (9%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGF-EPTQFTFGGLL-SCDSLNPVE-GAQL 61
++ +N +++A ++ + L +F +++ + +P FT+ +L +C L V G +
Sbjct: 69 DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 128
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V+K+G F D V ++ +G+Y + ++ + +F++MP + + +WN+++S + + G
Sbjct: 129 HTHVIKSG-FAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 187
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E + LF E+ S + VI + DLE G++IH ++++GF + V+++
Sbjct: 188 PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSA 247
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
LV+MY +C + A+++F+ ++ ++VVSWN++I + + +EL+ RM + + P
Sbjct: 248 LVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPT 307
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TT ++ +C+ N LGK IH +I+N +E D+FV S+L+D Y KC N+ A F
Sbjct: 308 LTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQ 367
Query: 302 EISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
+ N+VSWN +I GY S ++ + ++ + G +P+ TF+ VL + +L
Sbjct: 368 NMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEK 427
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
++H II E E V+G+L+ YAK G + +AL
Sbjct: 428 GKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEAL----------------------- 464
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ +QL D VSW +IAA +G E L+LF+ M+ + PD TF++
Sbjct: 465 ---------HIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLA 515
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM-----LIDMYGKCGSIGSSVKIFN 531
+LSACS G G ++I+ F + LID+ G+ G + + +I
Sbjct: 516 ILSACSH-----AGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQ 570
Query: 532 EMTD--RNVITWTALISALGLN 551
D +V + L SA L+
Sbjct: 571 RTPDIREDVGLLSTLFSACHLH 592
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/491 (29%), Positives = 239/491 (48%), Gaps = 49/491 (9%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIG 215
L+ G+ IH ++ G + + SL+N+YF C SA+ +F+ +E D+ WN ++
Sbjct: 19 LKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMA 78
Query: 216 ALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
A ++ F + LE++ R+ + P+ T+ V+ +C+GL GK +H VIK+
Sbjct: 79 ACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFA 138
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
DV V S+ V YAKC+ E A F E+ +++ SWN +I Y P L E +
Sbjct: 139 MDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEM 198
Query: 335 QL-GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
++ G++P+ T + V+ S L+ +H ++R G+ A G +
Sbjct: 199 KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGF--------------ALDGFV 244
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
S AL +Y + G ++ Q++R ++VSWN +IA +
Sbjct: 245 SSALV------------------DMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLK 286
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
GD K +ELF+ M I P T S+L ACS+ NL LG +HG I + + +D FV
Sbjct: 287 GDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRV-EADIFV 345
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
+ LID+Y KCG+IGS+ +F M NV++W +IS G AL F +M G
Sbjct: 346 NSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGV 405
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV----VDLLVRYGHL 625
KPD + +VL AC ++ +G E+ ++ +E +++ V +D+ + G +
Sbjct: 406 KPDAITFTSVLPACSQLAVLEKGKEI-----HNFIIESKLEINEVVMGALLDMYAKCGAV 460
Query: 626 KEAEKIITTMP 636
EA I +P
Sbjct: 461 DEALHIFNQLP 471
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 202/354 (57%), Gaps = 4/354 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+R+V S+N++IS Y + G E AL +F M GF+P T ++S C L +E G
Sbjct: 167 MPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERG 226
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ ++++G F D FV +AL+ +YG+ GCL+ VFE + RK++V+WNS+++ +
Sbjct: 227 KEIHMELVRSG-FALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSL 285
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + C+ LF + + T ++ ++ S +L+ G+ IHG +I+N + ++ V
Sbjct: 286 KGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFV 345
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+SL+++YF+C I SAE +F+++ +VVSWN +I + ++ +AL ++ M V
Sbjct: 346 NSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGV 405
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ TF V+ +C+ L GK IH +I++ LE + V AL+D YAKC ++ A
Sbjct: 406 KPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALH 465
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRS 351
F+++ ++ VSW ++I Y S L E +Q +P++ TF +L +
Sbjct: 466 IFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSA 519
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 207/424 (48%), Gaps = 56/424 (13%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T + ++ +C + GK IH K++ L+ ++ + +L++ Y C + A L F
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 301 SEISNK-NIVSWNALILGYASKSSPTSIFLLIELLQLGYR--------PNEFTFSHVLRS 351
I N +I WN L+ ++ T F+ IE L++ +R P+ FT+ VL++
Sbjct: 62 QTIENPLDITLWNGLM------AACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKA 115
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANI 410
R+GY G ++ ++ KSG D + +A+
Sbjct: 116 CSGLG---------RVGY-------GKMVHTHVIKSGFAMDVVVMSSAV----------- 148
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
G+Y + + + +KL ++ D+ SWN VI+ +G ++ LELF+ M+ + PD
Sbjct: 149 --GMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPD 206
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS----DTFVCNMLIDMYGKCGSIGSS 526
+ T +++S+C++L +L G +H E++ S D FV + L+DMYGKCG + +
Sbjct: 207 SVTLTTVISSCARLLDLERGKEIH-----MELVRSGFALDGFVSSALVDMYGKCGCLEMA 261
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
++F ++ +NV++W ++I+ L G ++ +E FR M+ G +P L ++L AC
Sbjct: 262 KEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRS 321
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
++ G + + R+ VE ++ ++DL + G++ AE + MP N + W
Sbjct: 322 VNLQLGKFIHGYIIRNR-VEADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNVVSWNV 379
Query: 647 FLEG 650
+ G
Sbjct: 380 MISG 383
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 183/621 (29%), Positives = 312/621 (50%), Gaps = 41/621 (6%)
Query: 38 EPTQFTFGGLL-SC-DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVV 95
E + +G LL SC + + G L ++K G C D F LL Y ++ L +
Sbjct: 41 EFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKG-NCLDLFANNILLNFYVKYDSLPDAA 99
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
+F++MP ++ V++ +++ + + + + LF L L F V+ L + +
Sbjct: 100 KLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAE 159
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
+ G +H V K GFD + V +L++ Y C A ++F +E +D+VSW ++
Sbjct: 160 WAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVA 219
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
E+E F ++L+L+ RM + PN TF V+ +C GL+ +GK++H K +
Sbjct: 220 CYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLE 279
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELL 334
++FVG L+D Y K +++ A F E+ +++ W+ +I YA S+ S +I + +
Sbjct: 280 ELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMR 339
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
+ PN+FT + +L++ + LQL HC ++++G + +V +LM YAK G +
Sbjct: 340 RGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRME 399
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
+ +++L S+ VSWN VI G
Sbjct: 400 N--------------------------------SLQLFSESPNCTDVSWNTVIVGYVQAG 427
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
+ ++ L LFK M ++ T+ S+L AC+ + L GS +H L KT I +T V
Sbjct: 428 NGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKT-IYDKNTVVG 486
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
N LIDMY KCG+I + +F+ + + + ++W A+IS ++G AL+ F M K
Sbjct: 487 NALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECK 546
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
PD+V + +L+AC + GL+ G F+ M Y +EP +HY C+V LL R GHL +A K
Sbjct: 547 PDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAK 606
Query: 631 IITTMPFPPNALIWRTFLEGC 651
++ +PF P+ ++WR L C
Sbjct: 607 LVHEIPFEPSVMVWRALLSAC 627
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 174/578 (30%), Positives = 283/578 (48%), Gaps = 56/578 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MPDRN VSF ++I YS+C +A+ +F + G E F F +L L E A+
Sbjct: 105 MPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKL--LVSAEWAK 162
Query: 61 L----QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
L A V K G F +DAFVGTAL+ Y G + VF+ + K +V+W +V+ +
Sbjct: 163 LGFSVHACVYKLG-FDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACY 221
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ E+ + LF + +F V+ + G+ +HG K + EL
Sbjct: 222 VENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEEL 281
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V L+++Y + + A ++F+++ DV+ W+ +I A+SE +A+E++ RM
Sbjct: 282 FVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRG 341
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+V PNQ T ++ +CA L + LG IH V+K L+ +VFV +AL+D YAKC +E +
Sbjct: 342 LVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENS 401
Query: 297 HLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
FSE N VSWN +I+GY + + ++ L ++L+ + E T+S VLR+
Sbjct: 402 LQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGI 461
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L Q+H L ++ Y+ V +L+ YAK G I DA R V
Sbjct: 462 AALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDA----------RLV------ 505
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
L D VSWN +I+ + +G Y E L+ F+ M PD
Sbjct: 506 ----------------FDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDK 549
Query: 472 YTFVSLLSACSKLCNLALGSS-LHGLIKKTEI-ISSDTFVCNMLIDMYGKCGSIGSSVKI 529
TFV +LSACS L G + ++++ +I ++ + C ++ + G+ G + + K+
Sbjct: 550 VTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTC--MVWLLGRSGHLDKAAKL 607
Query: 530 FNEMT-DRNVITWTALISALGLNG-------FAQRALE 559
+E+ + +V+ W AL+SA ++ AQR LE
Sbjct: 608 VHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLE 645
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 187/654 (28%), Positives = 319/654 (48%), Gaps = 81/654 (12%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE-GAQLQ 62
R+ VS+ ++IS S+ GY E+A+ +F ++ L +C + E G QL
Sbjct: 228 RDSVSWVAMISGLSQNGYEEEAMLLFCQIV-------------LSACTKVEFFEFGKQLH 274
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
VLK G F ++ +V AL+ LY R G L +F M ++ V++NS++S + G++
Sbjct: 275 GLVLKQG-FSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYI 333
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ LF ++ + ++ ++ L G+Q H IK G +++V SL
Sbjct: 334 NRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSL 393
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
+++Y +C+ I +A + F + +N K+ +++ +M ++ + PNQ
Sbjct: 394 LDLYVKCSDIKTAHEFFL---------------CYGQLDNLNKSFQIFTQMQIEGIVPNQ 438
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T+ ++ +C L + LG+ IH +V+K + +V+V S L+D YAK L+ A F
Sbjct: 439 FTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRR 498
Query: 303 ISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL--- 358
+ ++VSW A+I GY T ++ L E+ G + + F+ + + Q L
Sbjct: 499 LKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQG 558
Query: 359 -QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
Q+H GY SD L+ N + +Y R
Sbjct: 559 RQIHAQSCLSGY--------------------SDDLSI------------GNALVSLYAR 586
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G+ E Q+ D VSWN +++ A +G ++E L +F M A + +++TF S
Sbjct: 587 CGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSA 646
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
+SA + + N+ +G +HG+I+KT S+T V N LI +Y KCG+I
Sbjct: 647 VSAAANIANVRIGKQIHGMIRKTGY-DSETEVSNALITLYAKCGTIDD------------ 693
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
I+W ++I+ +G AL+ F +M+ L P+ V + VL+AC H GLV EG+ F
Sbjct: 694 -ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFR 752
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
M+ ++ + P+ +HY CVVDLL R G L A++ + MP P+A++WRT L C
Sbjct: 753 SMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSAC 806
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 167/637 (26%), Positives = 299/637 (46%), Gaps = 76/637 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEG-- 58
MP R++ +N I + + + +F M+ + E + F +L S N V
Sbjct: 123 MPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRF 182
Query: 59 -AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ A + +G F + F+ L+ LY ++G L VFE++ + V+W +++S
Sbjct: 183 VEQIHAKTITSG-FESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLS 241
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G+ E+ M LFC++V S A T+ F EFG+Q+HGLV+K GF E
Sbjct: 242 QNGYEEEAMLLFCQIVLS--ACTKVEF------------FEFGKQLHGLVLKQGFSSETY 287
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+LV +Y + + SAE++F + RD VS+N++I LA+ +AL L+ +M++D
Sbjct: 288 VCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDC 347
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P+ T ++++CA + GK H+ IK + D+ V +L+D Y KC +++ AH
Sbjct: 348 QKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAH 407
Query: 298 ---LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
LC+ ++ N N S + ++ G PN+FT+ +L++
Sbjct: 408 EFFLCYGQLDNLN-----------------KSFQIFTQMQIEGIVPNQFTYPSILKTCTT 450
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
Q+H +++ G++ YV L+ YAK G + AL
Sbjct: 451 LGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHAL----------------- 493
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
K+ +L+ D+VSW +IA + + E L LFK M+ I D
Sbjct: 494 ---------------KIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSD 538
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
N F S +SAC+ + L G +H S D + N L+ +Y +CG + + F
Sbjct: 539 NIGFASAISACAGIQALDQGRQIHAQ-SCLSGYSDDLSIGNALVSLYARCGKVREAYAAF 597
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+++ ++ ++W +L+S +G+ + AL F +M G + + + ++A + VR
Sbjct: 598 DQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVR 657
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G ++ M R G + E + + ++ L + G + +
Sbjct: 658 IGKQI-HGMIRKTGYDSETEVSNALITLYAKCGTIDD 693
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 151/582 (25%), Positives = 265/582 (45%), Gaps = 76/582 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
M R+ VS+NS+IS ++ GY+ AL +F M +P T LLS C S+ + G
Sbjct: 312 MSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNG 371
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q + +K G+ +D V +LL LY + C D + T + +G+
Sbjct: 372 KQFHSYAIKAGM-TSDIVVEGSLLDLYVK--CSD-------------IKTAHEFFLCYGQ 415
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ +F ++ + + ++ ++ + + GEQIH V+K GF + + V
Sbjct: 416 LDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYV 475
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++ L++MY + + A K+F+ ++ DVVSW +I + + F +AL L+ M +
Sbjct: 476 SSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGI 535
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ F I++CAG+Q G+ IHA+ + D+ +G+ALV YA+C + A+
Sbjct: 536 KSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYA 595
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F +I K+ VSWN+L+ G+A ++ + ++ + G N FTF + ++
Sbjct: 596 AFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIAN 655
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ Q+H +I + GY++ V +L+T YAK G I D + N +
Sbjct: 656 VRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD--------------ISWNSMIT 701
Query: 414 IYNRTGQYNETVKLLSQLER----PDIVSWNIVIAACAHNGDYKEVLELFKYM------- 462
Y++ G E +KL +++ P+ V++ V++AC+H G E + F+ M
Sbjct: 702 GYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLV 761
Query: 463 --------------------RAAR------IYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
RA R I PD + +LLSAC+ N+ +G
Sbjct: 762 PKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASH 821
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
+ + E S T+V ++ +MY G + M DR V
Sbjct: 822 LLELEPKDSATYV--LVSNMYAVSGKWDCRDRTRQMMKDRGV 861
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 178/399 (44%), Gaps = 73/399 (18%)
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSI-FLLIELLQL 336
+ G L+DFY +L A F E+ +++ WN + + ++ + L +L
Sbjct: 98 YDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTK 157
Query: 337 GYRPNEFTFSHVLR----SSLAFQLL-QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
+E F+ VLR ++++F+ + Q+H I G+E+ ++ L+ Y K+G +S
Sbjct: 158 NVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSS 217
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
A K+ L+ D VSW +I+ + NG
Sbjct: 218 A--------------------------------KKVFENLKARDSVSWVAMISGLSQNGY 245
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+E + LF + +LSAC+K+ G LHGL+ K + SS+T+VCN
Sbjct: 246 EEEAMLLFCQI--------------VLSACTKVEFFEFGKQLHGLVLK-QGFSSETYVCN 290
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
L+ +Y + G++ S+ +IF+ M+ R+ +++ +LIS L G+ RAL F++M KP
Sbjct: 291 ALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKP 350
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR---------- 621
D V + ++L+AC G + G + F G+ ++ ++DL V+
Sbjct: 351 DCVTVASLLSACASVGALPNGKQ-FHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEF 409
Query: 622 ---YGHLKEAEK---IITTMPFP---PNALIWRTFLEGC 651
YG L K I T M PN + + L+ C
Sbjct: 410 FLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTC 448
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 184/655 (28%), Positives = 328/655 (50%), Gaps = 33/655 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MPD +VVS+N++IS Y + G +++ + + M RG + T LL SC L+ + G
Sbjct: 111 MPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALG 170
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A +K GL D G+AL+ +YG+ LD+ + F M ++ V+W + ++ +
Sbjct: 171 VQIHALAVKTGLE-TDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQ 229
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ M LF ++ R + +++ ++ + L Q+H IKN F + +V
Sbjct: 230 NEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVV 289
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++V++Y + + A + F + +V + N ++ L + +A++L+ M+ V
Sbjct: 290 GTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGV 349
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ + V ++CA ++ G +H +K+ + DV V +A++D Y KC L A+L
Sbjct: 350 GFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYL 409
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F E+ ++ VSWNA+I +I L E+L+ G P++FT+ VL++ Q
Sbjct: 410 VFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQS 469
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
L EY L + KSGL DA T ++ +Y +
Sbjct: 470 L--------------EYGL-VVHGKAIKSGLGLDAFVSSTVVD-------------MYCK 501
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G E KL ++ ++VSWN +I+ + +E F M + PD++T+ ++
Sbjct: 502 CGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATV 561
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L C+ L + LG +HG I K E++ D ++ + L+DMY KCG++ S+ +F + +
Sbjct: 562 LDTCANLATIELGKQIHGQIIKQEML-GDEYISSTLVDMYAKCGNMPDSLLMFEKARKLD 620
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
++W A+I L+G ALE F M+ P+ +AVL AC H GL+ +G + F
Sbjct: 621 FVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFH 680
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M Y + P+++H+ C+VD+L R +EA + I +MP +A++W+T L C+
Sbjct: 681 LMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICK 735
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 159/606 (26%), Positives = 283/606 (46%), Gaps = 50/606 (8%)
Query: 32 MINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCL 91
M+ GF PT F LL + G A + + + D +L Y G
Sbjct: 45 MLVSGFMPTTFVSNCLLQ---MYARCGGTAHAHGVFDTMPHRDTVSWNTMLTAYVHAGDT 101
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
D S+F MP +V+WN+++S + +HG + + L E+ R VAL ++ ++
Sbjct: 102 DTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSC 161
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
DL G QIH L +K G + ++ ++LV+MY +C + A + F + R+ VSW
Sbjct: 162 GGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWG 221
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
I ++E + + +EL+++M + +Q + SCA + + +HA IKN
Sbjct: 222 AAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKN 281
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK---SSPTSIF 328
D VG+A+VD YAK NL A F + + N+ + NA+++G + +F
Sbjct: 282 VFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLF 341
Query: 329 LLIELLQLGYRPNEFT--FSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
+ +G+ + FS FQ LQ+HCL ++ G++ V +++ Y K
Sbjct: 342 QFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKC 401
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
+A+V A ++ ++E+ D VSWN +IAA
Sbjct: 402 ----------------KALVEAYLV----------------FQEMEQRDSVSWNAIIAAL 429
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
N Y++ + M + + PD++T+ S+L AC+ L +L G +HG K+ + D
Sbjct: 430 EQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSG-LGLD 488
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
FV + ++DMY KCG+I + K+ + + + +++W ++IS L ++ A F EM
Sbjct: 489 AFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLD 548
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM--DHY--HCVVDLLVRY 622
+G KPD VL C + + G ++ ++ ++ EM D Y +VD+ +
Sbjct: 549 MGVKPDHFTYATVLDTCANLATIELGKQIHGQI-----IKQEMLGDEYISSTLVDMYAKC 603
Query: 623 GHLKEA 628
G++ ++
Sbjct: 604 GNMPDS 609
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 142/530 (26%), Positives = 248/530 (46%), Gaps = 23/530 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNP-VEG 58
+P NV + N+++ R G +A+++F +M G + G+ S C + +G
Sbjct: 313 LPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQG 372
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K+G F D V A+L LYG+ L E VF++M ++ V+WN+I++ +
Sbjct: 373 LQVHCLAVKSG-FDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQ 431
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ ED + E++RS + + ++ V+ + Q LE+G +HG IK+G + V
Sbjct: 432 NECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFV 491
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++++V+MY +C I A+K+ + +++VSWN+II + ++ +A + M V
Sbjct: 492 SSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGV 551
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T+ V+++CA L LGK IH ++IK + D ++ S LVD YAKC N+ + L
Sbjct: 552 KPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLL 611
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQL 357
F + + VSWNA+I GYA + E +Q PN TF VLR+ L
Sbjct: 612 MFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGL 671
Query: 358 LQLHCLIIRMGYENYEYV-----LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L C + Y+ V ++ +S +AL F+ ++ I V +
Sbjct: 672 LDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLL 731
Query: 413 GIYNRTGQYNETVKLLSQLER--PDIVSWNIVIAAC-AHNGDYKEVLELFKYMRAARIYP 469
I S + R PD S I+++ A +G + +V + MR R+
Sbjct: 732 SICKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRK 791
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
+ CS + + S +HG + ++ V ML + G+
Sbjct: 792 E--------PGCSW---IEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGE 830
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 224/522 (42%), Gaps = 92/522 (17%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L G+ H ++ +GF V+N L+ MY +C G A +F + RD VSWNT++ A
Sbjct: 35 LTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDTVSWNTMLTA 94
Query: 217 LAESENFGKALELY-------------------------------LRMSVDIVFPNQTTF 245
+ + A L+ + MS V ++TT
Sbjct: 95 YVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTL 154
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
++ SC GL + LG IHA +K LE DV GSALVD Y KC +L+ A F +
Sbjct: 155 AVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGE 214
Query: 306 KNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QL 360
+N VSW A I G T + L +++ +LG ++ ++ RS A L QL
Sbjct: 215 RNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQL 274
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H I+ + + V +++ YAK+G + DA RA +
Sbjct: 275 HAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDA---------RRAFIG------------- 312
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
L ++ + N ++ G E ++LF++M + + D + + SA
Sbjct: 313 ----------LPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSA 362
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C+++ G +H L K+ D V N ++D+YGKC ++ + +F EM R+ ++
Sbjct: 363 CAEVKGYFQGLQVHCLAVKSG-FDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVS 421
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-----------HGGLV 589
W A+I+AL N + + EM G +PD +VL AC HG +
Sbjct: 422 WNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAI 481
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ G+ L ++ + VVD+ + G + EA+K+
Sbjct: 482 KSGLGLDAFVSST------------VVDMYCKCGAITEAQKL 511
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 17/283 (6%)
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H ++ G+ +V L+ YA+ G + A + R V N + Y G
Sbjct: 42 HARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMP-HRDTVSWNTMLTAYVHAGD 100
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+ L + PD+VSWN +I+ +G ++ + L M + D T LL +
Sbjct: 101 TDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKS 160
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C L +LALG +H L KT + +D + L+DMYGKC S+ +++ F+ M +RN ++
Sbjct: 161 CGGLDDLALGVQIHALAVKTGL-ETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVS 219
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM- 599
W A I+ N R +E F +M+ LG + A + +C + +L
Sbjct: 220 WGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAI 279
Query: 600 ------NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+R G +VD+ + G+L +A + +P
Sbjct: 280 KNVFSSDRVVGT--------AIVDVYAKAGNLVDARRAFIGLP 314
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 149/383 (38%), Gaps = 71/383 (18%)
Query: 239 FPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
F TF ++ CA S L G++ HA+++ + FV + L+ YA+C A
Sbjct: 14 FVATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHA 73
Query: 297 HLCFSEISNKNIVSWNALILGY---ASKSSPTSIF------------------------- 328
H F + +++ VSWN ++ Y + S+F
Sbjct: 74 HGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFR 133
Query: 329 ----LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLM 380
L +E+ + G + T + +L+S L Q+H L ++ G E +L+
Sbjct: 134 NSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALV 193
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
Y K + DAL F ++ G+ N VSW
Sbjct: 194 DMYGKCRSLDDALRF-------------------FHGMGERNS-------------VSWG 221
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
IA C N Y +ELF M+ + + S +C+ + L+ LH K
Sbjct: 222 AAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKN 281
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
+ SSD V ++D+Y K G++ + + F + NV T A++ L G A++
Sbjct: 282 -VFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQL 340
Query: 561 FREMEFLGFKPDRVALIAVLTAC 583
F+ M G D ++L V +AC
Sbjct: 341 FQFMTRSGVGFDVISLSGVFSAC 363
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 178/590 (30%), Positives = 309/590 (52%), Gaps = 39/590 (6%)
Query: 73 ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL 132
+D +V +L Y + G L +F++MP++ V+WN+++S + G +ED LF +
Sbjct: 33 SDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCM 92
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
RS + SF ++ G+++ + + GEQ+HGLVIK G++ + V +SLV+MY +C +
Sbjct: 93 KRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERV 152
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINS 251
A + FK++ + VSWN +I + + A L M + V + TF ++
Sbjct: 153 EDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTL 212
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS-NKNIVS 310
L K +HAKV+K L+ ++ + +A++ YA C ++ A F + +K+++S
Sbjct: 213 LDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLIS 272
Query: 311 WNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLR--SSLAFQLL--QLHCLII 365
WN++I G++ S F L I++ + + +T++ +L S Q+ LH ++I
Sbjct: 273 WNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVI 332
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
+ G E +L++ Y + P TG + +
Sbjct: 333 KKGLEQVTSATNALISMY---------------IQFP---------------TGTMEDAL 362
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
L L+ D++SWN +I A G ++ ++ F Y+R++ I D+Y F +LL +CS L
Sbjct: 363 SLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLA 422
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN-VITWTAL 544
L LG +H L K+ +S++ FV + LI MY KCG I S+ K F +++ ++ + W A+
Sbjct: 423 TLQLGQQIHALATKSGFVSNE-FVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAM 481
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I +G Q +L+ F +M K D V A+LTAC H GL++EG+EL M Y
Sbjct: 482 ILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYK 541
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC 654
++P M+HY VDLL R G + +A+++I +MP P+ ++ +TFL C+ C
Sbjct: 542 IQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRAC 591
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 145/555 (26%), Positives = 281/555 (50%), Gaps = 33/555 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+ VS+N++IS Y+ CG +EDA +F M G + ++F LL S+ + G
Sbjct: 61 MPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLG 120
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ V+K G C + +VG++L+ +Y + +++ F+++ + V+WN++++ F +
Sbjct: 121 EQVHGLVIKGGYEC-NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQ 179
Query: 119 HGFVEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ +L + +++ V + +F ++ L + +Q+H V+K G +E+
Sbjct: 180 VRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEIT 239
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ N++++ Y C + A+++F + +D++SWN++I ++ E A EL+++M
Sbjct: 240 ICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRH 299
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK--CDNLE 294
V + T+ ++++C+G ++ I GKS+H VIK LE +AL+ Y + +E
Sbjct: 300 WVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTME 359
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F + +K+++SWN++I G+A K S ++ L + +++ FS +LRS
Sbjct: 360 DALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCS 419
Query: 354 AFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
LQL H L + G+ + E+V+ SL+ Y+K G+I A ++ + V N
Sbjct: 420 DLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWN 479
Query: 410 IIAGIYNRTGQYNETVKLLSQL----ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+ Y + G ++ L SQ+ + D V++ ++ AC+H G +E LEL M
Sbjct: 480 AMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPV 539
Query: 466 -RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT-EIISS-----DTFVCNMLIDMYG 518
+I P + + + LG + GL+ K E+I S D V + +
Sbjct: 540 YKIQPRMEHYAAAVD--------LLGRA--GLVNKAKELIESMPLNPDPMVLKTFLGVCR 589
Query: 519 KCGSIGSSVKIFNEM 533
CG I + ++ N +
Sbjct: 590 ACGEIEMATQVANHL 604
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 230/500 (46%), Gaps = 51/500 (10%)
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H IK G ++ V+N +++ Y + + A +F ++ RD VSWNT+I
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
A L+ M + +F ++ A ++ LG+ +H VIK EC+V+VGS+L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL--GYRPN 341
VD YAKC+ +E A F EIS N VSWNALI G+ + F L+ L+++ +
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 342 EFTFSHVLR----SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
TF+ +L L Q+H ++++G ++ + ++++SYA G +SDA
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
L + D++SWN +IA + + + E
Sbjct: 263 GLGGSK-------------------------------DLISWNSMIAGFSKHELKESAFE 291
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI--KKTEIISSDTFVCNMLID 515
LF M+ + D YT+ LLSACS + G SLHG++ K E ++S T N LI
Sbjct: 292 LFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSAT---NALIS 348
Query: 516 MYGK--CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
MY + G++ ++ +F + +++I+W ++I+ G ++ A++ F + K D
Sbjct: 349 MYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDD 408
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY---GHLKEAEK 630
A A+L +C ++ G ++ +S V E + L+V Y G ++ A K
Sbjct: 409 YAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEF----VISSLIVMYSKCGIIESARK 464
Query: 631 IITTMPFPPNALIWRTFLEG 650
+ + + W + G
Sbjct: 465 CFQQISSKHSTVAWNAMILG 484
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 204/661 (30%), Positives = 323/661 (48%), Gaps = 46/661 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLN--PVEGA 59
R+V NS+I Y + ++ + F M+ G P F+ ++S C N +G
Sbjct: 630 RDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGK 689
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS-LVTWNSIVSIFGK 118
Q+ +L+N L D+F+ TAL+ +Y + G + VF ++ KS +V WN ++ FG
Sbjct: 690 QIHGYMLRNSLD-GDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGG 748
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
E + L+ + V L +SF G + S ++ FG QIH V+K G D + V
Sbjct: 749 SEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYV 808
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ SL++MY +C + AE +F V + + WN ++ A E++N ALEL+ M V
Sbjct: 809 STSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSV 868
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T VI+ C+ GKS+HA++ K ++ + SAL+ Y+KC A+L
Sbjct: 869 LPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYL 928
Query: 299 CFSEISNKNIVSWNALILGYASK---SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F + K++V+W +LI G +F ++ +P+ + V+ +
Sbjct: 929 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGL 988
Query: 356 QL----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ LQ+H +I+ G +V SL+ Y+K GL AL T++ P NI+
Sbjct: 989 EALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMR------PENIV 1042
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
A WN +I+ + N + +ELF M + I+PD+
Sbjct: 1043 A--------------------------WNSMISCYSRNNLPELSIELFNLMLSQGIFPDS 1076
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ S+L A S +L G SLHG + I SDT + N LIDMY KCG + IF
Sbjct: 1077 VSITSVLVAISSTASLLKGKSLHGYTLRLG-IPSDTHLKNALIDMYVKCGFSKYAENIFK 1135
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+M +++ITW +I G +G + AL F E++ G PD V +++++AC H G V E
Sbjct: 1136 KMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVEE 1195
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G FE M + YG+EP+M+HY +VDLL R G L+EA I MP ++ IW L
Sbjct: 1196 GKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSAS 1255
Query: 652 Q 652
+
Sbjct: 1256 R 1256
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 177/649 (27%), Positives = 305/649 (46%), Gaps = 59/649 (9%)
Query: 8 SFNSIISAYSRCGYVEDALRMFLYMINRGFEP---TQFTFGGLL-SCDSL-NPVEGAQLQ 62
S NS I A + G AL LY + G P + FTF LL +C SL N G +
Sbjct: 527 SVNSGIRALIQKGEYLQALH--LYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIH 584
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-----KSLVTWNSIVSIFG 117
S++ G + D F+ T+L+ +Y + G LD V VF+ + + + NS++ +
Sbjct: 585 GSIIVLG-WRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYF 643
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL--EFGEQIHGLVIKNGFDYE 175
K ++ + F ++ V S V+ L E + E G+QIHG +++N D +
Sbjct: 644 KFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGD 703
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRMS 234
+ +L++MYF+ A ++F ++E + +VV WN +I SE +LELY+
Sbjct: 704 SFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAK 763
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ V T+F + +C+ +NS G+ IH V+K L+ D +V ++L+ Y+KC +
Sbjct: 764 SNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVG 823
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSL 353
A FS + +K + WNA++ Y + S L + Q P+ FT S+V+
Sbjct: 824 EAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCS 883
Query: 354 AFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
F L +H + + ++ + +L+T Y+K G +DA
Sbjct: 884 MFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYL--------------- 928
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR--AARI 467
+ +E D+V+W +I+ NG +KE L++F M+ +
Sbjct: 929 -----------------VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSL 971
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
PD+ S+++AC+ L L+ G +HG +IK +++ + FV + LID+Y KCG +
Sbjct: 972 KPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVL--NVFVGSSLIDLYSKCGLPEMA 1029
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
+K+F M N++ W ++IS N + ++E F M G PD V++ +VL A
Sbjct: 1030 LKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISST 1089
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+ +G L R G+ + + ++D+ V+ G K AE I M
Sbjct: 1090 ASLLKGKSLHGYTLR-LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKM 1137
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 153/610 (25%), Positives = 279/610 (45%), Gaps = 52/610 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQ 62
NVV +N +I + E +L +++ + + +F G L S N G Q+
Sbjct: 735 NVVLWNVMIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIH 794
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
V+K GL D +V T+LL +Y + G + E +VF + K L WN++V+ + ++
Sbjct: 795 CDVVKMGLD-NDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNG 853
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ LF + + V + VI S ++G+ +H + K + ++L
Sbjct: 854 YSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESAL 913
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY--LRMSVDIVFP 240
+ +Y +C A +FK +E +D+V+W ++I L ++ F +AL+++ ++ D + P
Sbjct: 914 LTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKP 973
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ VIN+CAGL+ G +H +IK +VFVGS+L+D Y+KC E A F
Sbjct: 974 DSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVF 1033
Query: 301 SEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQLL 358
+ + +NIV+WN++I Y+ + P SI L +L G P+ + + VL + S LL
Sbjct: 1034 TSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLL 1093
Query: 359 Q---LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+ LH +R+G + ++ +L+ Y K G
Sbjct: 1094 KGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGF--------------------------- 1126
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+Y E + +++ +++WN++I +GD + L LF ++ A PD+ TF+
Sbjct: 1127 ---SKYAENI--FKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFL 1181
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-T 534
SL+SAC+ + G + ++K+ I ++D+ G+ G + + M T
Sbjct: 1182 SLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPT 1241
Query: 535 DRNVITWTALISALGLNGFAQRAL---EKFREMEFLGFKPDR-VALIAVLTACRHGGLVR 590
+ + W L+SA + + + EK ME P+R + ++ GL
Sbjct: 1242 EADSSIWLCLLSASRTHHNVELGILSAEKLLRME-----PERGSTYVQLINLYMEAGLKN 1296
Query: 591 EGMELFERMN 600
E +L M
Sbjct: 1297 EAAKLLGEMK 1306
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/541 (23%), Positives = 241/541 (44%), Gaps = 69/541 (12%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGAQ 60
D+ + +N++++AY AL +F +M + P FT ++SC S+ + G
Sbjct: 834 DKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKS 893
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ A + K + A + +ALL LY + GC + VF+ M K +V W S++S K+G
Sbjct: 894 VHAELFKRPIQSTPA-IESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNG 952
Query: 121 FVEDCMFLFCELVRSEVALTESS--FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
++ + +F ++ + +L S VI+ + + L FG Q+HG +IK G + V
Sbjct: 953 KFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFV 1012
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+SL+++Y +C A K+F + ++V+WN++I + + ++EL+ M +
Sbjct: 1013 GSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGI 1072
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
FP+ + V+ + + + + GKS+H ++ + D + +AL+D Y KC + A
Sbjct: 1073 FPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAEN 1132
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F ++ +K++++WN +I GY S T++ L EL + G P++ TF
Sbjct: 1133 IFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFL----------- 1181
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
SL+++ SG + + F + + P +
Sbjct: 1182 --------------------SLISACNHSGFVEEGKNFFEIMKQDYGIEP---------K 1212
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
Y V LL + R + E + +++A D+ ++ L
Sbjct: 1213 MEHYANMVDLLGRAGRLE---------------------EAYSFIKAMPTEADSSIWLCL 1251
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
LSA N+ LG + + E T+V LI++Y + G + K+ EM +R
Sbjct: 1252 LSASRTHHNVELGILSAEKLLRMEPERGSTYV--QLINLYMEAGLKNEAAKLLGEMKERG 1309
Query: 538 V 538
+
Sbjct: 1310 L 1310
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 126/266 (47%), Gaps = 14/266 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP--VEG 58
M N+V++NS+IS YSR E ++ +F M+++G P + +L S ++G
Sbjct: 1036 MRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKG 1095
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L L+ G+ +D + AL+ +Y + G ++F+ M KSL+TWN ++ +G
Sbjct: 1096 KSLHGYTLRLGI-PSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGS 1154
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYELL 177
HG + LF EL ++ + +F+ +I ++ +E G+ ++ ++ G + ++
Sbjct: 1155 HGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKME 1214
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKAL---ELYLRM 233
++V++ + + A K + D W ++ A N + E LRM
Sbjct: 1215 HYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVELGILSAEKLLRM 1274
Query: 234 SVDIVFPNQTTFVYVIN--SCAGLQN 257
+ +T+V +IN AGL+N
Sbjct: 1275 EPE----RGSTYVQLINLYMEAGLKN 1296
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 176/600 (29%), Positives = 304/600 (50%), Gaps = 39/600 (6%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q++ +++ G + + L+ LY G + E +F+ + K++VTWN++++ +
Sbjct: 76 GKQVRDHIIQGGRQL-NIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYA 134
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G V++ LF ++V + + +F+ V+ S+ L +G+++H V+ GF +
Sbjct: 135 QVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFR 194
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ +LV+MY + + A ++F + IRDV ++N ++G A+S ++ KA EL+ RM
Sbjct: 195 IGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVG 254
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ PN+ +F+ +++ C + GK++HA+ + L D+ V ++L+ Y C ++EGA
Sbjct: 255 LKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGAR 314
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLR----SS 352
F + +++VSW +I GYA + F L +Q G +P+ T+ H++ S+
Sbjct: 315 RVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISA 374
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
++H + G+ V +L+ YAK G I DA
Sbjct: 375 NLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDAR------------------- 415
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
++ + R D+VSW+ +I A NG E E F M+ + I PD
Sbjct: 416 -------------QVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGV 462
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T+++LL+AC L L +G ++ K +++S + N LI M K GS+ + IF+
Sbjct: 463 TYINLLNACGHLGALDVGMEIYTQAIKADLVSH-VPLGNALIIMNAKHGSVERARYIFDT 521
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
M R+VITW A+I L+G A+ AL F M F+P+ V + VL+AC G V EG
Sbjct: 522 MVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEG 581
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F + G+ P + Y C+VDLL R G L EAE +I +MP P + IW + L C+
Sbjct: 582 RRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACR 641
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/565 (26%), Positives = 281/565 (49%), Gaps = 36/565 (6%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQ 60
++ VV++N++I+ Y++ G+V++A +F M++ G EP+ TF +L +C S + G +
Sbjct: 120 NKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKE 179
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ A V+ G F +D +GTAL+ +Y + G +D+ VF+ + + + T+N +V + K G
Sbjct: 180 VHAQVVTAG-FVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSG 238
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
E LF + + + + SF+ ++ G + L +G+ +H + G ++ VA
Sbjct: 239 DWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVAT 298
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL+ MY C I A ++F ++++RDVVSW +I AE+ N A L+ M + + P
Sbjct: 299 SLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQP 358
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
++ T+++++N+CA N + IH++V D+ V +ALV YAKC ++ A F
Sbjct: 359 DRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVF 418
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQ 359
+ +++VSW+A+I Y T F L++ P+ T+ ++L +
Sbjct: 419 DAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNAC------- 471
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
H + +G E Y + + + S+ G +AL + A + G
Sbjct: 472 GHLGALDVGMEIYTQAIKADLVSHVPLG---NALIIMNA------------------KHG 510
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+ + R D+++WN +I + +G+ +E L LF M R P++ TFV +LS
Sbjct: 511 SVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLS 570
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
ACS+ + G + + I + ++D+ G+ G + + + M +
Sbjct: 571 ACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTS 630
Query: 540 T-WTALISALGLNG---FAQRALEK 560
+ W++L+ A ++G A+RA E+
Sbjct: 631 SIWSSLLVACRIHGNLDVAERAAER 655
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 159/320 (49%), Gaps = 5/320 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCD-SLNPVEG 58
M R+VVS+ +I Y+ G +EDA +F M G +P + T+ ++ +C S N
Sbjct: 320 MKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHA 379
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ + V G F D V TAL+ +Y + G + + VF+ MPR+ +V+W++++ + +
Sbjct: 380 REIHSQVDIAG-FGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVE 438
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G+ + F + RS + +++ +++ + L+ G +I+ IK + +
Sbjct: 439 NGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPL 498
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+ M + + A +F + RDV++WN +IG + N +AL L+ RM +
Sbjct: 499 GNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERF 558
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCDNLEGAH 297
PN TFV V+++C+ G+ +++ + V + +VD + L+ A
Sbjct: 559 RPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAE 618
Query: 298 LCFSEISNKNIVS-WNALIL 316
L + K S W++L++
Sbjct: 619 LLIKSMPVKPTSSIWSSLLV 638
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 111/220 (50%), Gaps = 5/220 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP R+VVS++++I AY GY +A F M EP T+ LL +C L ++ G
Sbjct: 421 MPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVG 480
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ +K L + +G AL+ + +HG ++ +F+ M R+ ++TWN+++ +
Sbjct: 481 MEIYTQAIKADL-VSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSL 539
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELL 177
HG + ++LF +++ +FVGV+ S ++ G + +++ G +
Sbjct: 540 HGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVK 599
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS-WNTIIGA 216
+ +V++ + + AE + K + ++ S W++++ A
Sbjct: 600 LYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVA 639
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS----DTFVCNMLIDMYGKCGSIGS 525
D+ T+V L C++L + ALG + + II + + N LI +Y CG++
Sbjct: 56 DSRTYVKLFQRCTELRDAALGKQV-----RDHIIQGGRQLNIYELNTLIKLYSICGNVTE 110
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ +IF+ + ++ V+TW ALI+ G + A FR+M G +P + ++VL AC
Sbjct: 111 ARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSS 170
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ G E+ ++ + G + +V + V+ G + +A ++
Sbjct: 171 PAGLNWGKEVHAQVV-TAGFVSDFRIGTALVSMYVKGGSMDDARQV 215
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
M R+V+++N++I YS G +AL +F M+ F P TF G+LS C V EG
Sbjct: 522 MVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEG 581
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVT-WNSIVSIFG 117
+ +L+ + ++ L GR G LDE + + MP K + W+S++
Sbjct: 582 RRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACR 641
Query: 118 KHG 120
HG
Sbjct: 642 IHG 644
>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
Length = 1026
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 191/656 (29%), Positives = 333/656 (50%), Gaps = 39/656 (5%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSL--NPVEG 58
P +++VSFNS+ISAY + ++A +F M G P T +L SC L G
Sbjct: 302 PVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHG 361
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ ++K GL V +AL+ +Y + G LD +F K+ + WNS++S +
Sbjct: 362 ESVHGMIIKLGL-AEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLV 420
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + FC++ + VA ++ + VI G +DL + IH ++N F+ V
Sbjct: 421 NNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSV 480
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+ MY C I ++ +F+ +E+R ++SWNT+I AE + +L L+ +M + V
Sbjct: 481 MNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEV 540
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ + T + +I+S + +++I+G+S+H+ IK+ DV + +AL+ YA C +E
Sbjct: 541 WFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQ 600
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+ ++N +++NAL+ GY + I L ++++ +PN T ++L +
Sbjct: 601 LFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLL--PVCQSQ 658
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA-GIYN 416
LQ C+ SYA N R P A G+Y+
Sbjct: 659 LQGKCI-----------------HSYA-------------VRNFTRLETPLFTSAMGMYS 688
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
R + S + +++ WN ++AC V++ FK+M + PD T ++
Sbjct: 689 RFNNIEYCRTIFSLVSARNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLA 748
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
L+SACS+L N + + +I + S + V N LID + +CGSI + ++F+ ++
Sbjct: 749 LISACSQLGNADFAACIMAVILQKGF-SMNILVLNALIDTHSRCGSISFARELFDSSVEK 807
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+ +TW A+I+A ++G + AL+ F M G PD + +++L+AC H GLV +G LF
Sbjct: 808 DSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACSHNGLVEQGRTLF 867
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ + +G+ P M+HY C+VDLL R GHL EA I+ +MPF P+ + + L C+
Sbjct: 868 KSLQADHGITPRMEHYACMVDLLGRTGHLDEAYDIVRSMPFTPSDNLLESLLGACR 923
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 154/592 (26%), Positives = 273/592 (46%), Gaps = 45/592 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEGAQL 61
R+++S+N+++S YS G +A+ M G P T G++ C S + V G L
Sbjct: 203 RDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVAGDSL 262
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A LK G D + +AL+ +Y L VF+ P K LV++NS++S + +H
Sbjct: 263 HAFALKGGTI-DDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSN 321
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF----GEQIHGLVIKNGFDYELL 177
++ +F + + V + V V+ S DL F GE +HG++IK G ++
Sbjct: 322 WKEAFEVFRLMHCAGVGPNLITLVSVLPSCS---DLLFGINHGESVHGMIIKLGLAEQVS 378
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V ++LV+MY + + S+ +F ++ + WN++I + + AL+ + +M +
Sbjct: 379 VVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAG 438
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ TT + VI+ C ++ + KSIHA ++N E V +AL+ YA C ++ ++
Sbjct: 439 VAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSY 498
Query: 298 LCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F ++ + ++SWN +I G+A S TS+ L F + + F
Sbjct: 499 TLFQKMEVRMLISWNTMISGFAEIGDSETSLTL---------------FCQMFHEEVWFD 543
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L+ L LI + V S+ + KSG ISD V N + +Y
Sbjct: 544 LVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISD-------------VSLTNALITMYA 590
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
G +L + + +++N +++ N +++L LF M P+ T ++
Sbjct: 591 NCGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTLLN 650
Query: 477 LLSACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
LL C G +H ++ + + F M MY + +I IF+ ++
Sbjct: 651 LLPVCQSQLQ---GKCIHSYAVRNFTRLETPLFTSAM--GMYSRFNNIEYCRTIFSLVSA 705
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
RN+I W A +SA A ++ F+ M FL +PD V ++A+++AC G
Sbjct: 706 RNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLG 757
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 168/665 (25%), Positives = 285/665 (42%), Gaps = 93/665 (13%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDM--PRKSLVTWNSIVSIFGKHGFVEDCMFLFCE 131
D FV T L+ Y G +F + R ++ + N +V F HGF + + L+
Sbjct: 72 DRFVVTGLVERYVSFGKPASAALLFAEAYRGRPAVYSLNLVVRCFSDHGFHRELLDLYRG 131
Query: 132 LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
L +F VI + L+ G Q+H V++ G + V +L++MY +
Sbjct: 132 LC--GFGSDNFTFPPVIRACTAASCLQLGRQVHCRVLRTGHGSNVGVQTALLDMYAKAGQ 189
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
I + ++F + +RD++SWN ++ + + F +A+E M + PN +T V ++
Sbjct: 190 IDVSRRVFDCMVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGM 249
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
C + + G S+HA +K D + SAL+ YA D+L + L F K++VS+
Sbjct: 250 CGSAGDRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSF 309
Query: 312 NALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLR--SSLAFQLLQ---LHCLII 365
N++I Y S+ F + L+ G PN T VL S L F + +H +II
Sbjct: 310 NSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMII 369
Query: 366 RMGYENYEYVLGSLMTSYAKSG-LISDALAFV------------------------TALN 400
++G V+ +L++ Y+K G L S +L F AL+
Sbjct: 370 KLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALD 429
Query: 401 ----------IPRAVVPANIIAG-----------------IYNR---------------- 417
P A N+I+G + NR
Sbjct: 430 AFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYA 489
Query: 418 -TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
G + + L ++E ++SWN +I+ A GD + L LF M ++ D T +
Sbjct: 490 DCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIG 549
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
L+S+ S + +G S+H L K+ I SD + N LI MY CG + + ++FN R
Sbjct: 550 LISSLSVSEDAIVGESVHSLAIKSGCI-SDVSLTNALITMYANCGIVEAGQQLFNSFCSR 608
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
N IT+ AL+S N +++ L F +M KP+ V L+ +L C+ +L
Sbjct: 609 NTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVCQS--------QLQ 660
Query: 597 ERMNRSYGVEP----EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ SY V E + + + R+ +++ I + + N ++W FL C
Sbjct: 661 GKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTIFSLVS-ARNLIVWNAFLSACV 719
Query: 653 RCRIA 657
+C+ A
Sbjct: 720 QCKQA 724
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/524 (20%), Positives = 224/524 (42%), Gaps = 70/524 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
M R ++S+N++IS ++ G E +L +F M + T GL+S S+ + + G
Sbjct: 504 MEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVG 563
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + +K+G +D + AL+ +Y G ++ +F ++ +T+N+++S + K
Sbjct: 564 ESVHSLAIKSGCI-SDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRK 622
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ E + LF ++V+++ + + V +++ L Q G+ IH ++N E +
Sbjct: 623 NNVSEKILPLFTQMVKND---EKPNLVTLLNLLPVCQSQLQGKCIHSYAVRNFTRLETPL 679
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
S + MY + I +F V R+++ WN + A + + ++ + M V
Sbjct: 680 FTSAMGMYSRFNNIEYCRTIFSLVSARNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNV 739
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ T + +I++C+ L N+ I A +++ ++ V +AL+D +++C ++ A
Sbjct: 740 RPDEVTMLALISACSQLGNADFAACIMAVILQKGFSMNILVLNALIDTHSRCGSISFARE 799
Query: 299 CFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F K+ V+W A+I Y+ + ++ L ++ G P++ TF
Sbjct: 800 LFDSSVEKDSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFV----------- 848
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
S++++ + +GL+ +L + P R
Sbjct: 849 --------------------SILSACSHNGLVEQGRTLFKSLQADHGITP---------R 879
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
Y V LL + D E + +R+ P + SL
Sbjct: 880 MEHYACMVDLLGRTGHLD---------------------EAYDIVRSMPFTPSDNLLESL 918
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
L AC N +G S+ L+ K+E S ++V ML ++Y G
Sbjct: 919 LGACRFHGNYKIGESVGKLLIKSEYGKSRSYV--MLSNIYASAG 960
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 165/395 (41%), Gaps = 41/395 (10%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI--SNKNIVSWNALILGYA 319
+ IHA++ D FV + LV+ Y A L F+E + S N ++ ++
Sbjct: 58 REIHARLAVAGAIQDRFVVTGLVERYVSFGKPASAALLFAEAYRGRPAVYSLNLVVRCFS 117
Query: 320 SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYV 375
+ L L G+ + FTF V+R+ A LQL HC ++R G+ + V
Sbjct: 118 DHGFHRELLDLYRGL-CGFGSDNFTFPPVIRACTAASCLQLGRQVHCRVLRTGHGSNVGV 176
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
+L+ YAK+G I ++ R V ++ D
Sbjct: 177 QTALLDMYAKAGQI----------DVSRRVFDCMVL----------------------RD 204
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
++SWN +++ + NG ++E +E + M+ + P+ T V ++ C + G SLH
Sbjct: 205 LISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHA 264
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
K I ++ + LI MY + SS +F+ ++++++ ++ISA + +
Sbjct: 265 FALKGGTIDDESLT-SALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHSNWK 323
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
A E FR M G P+ + L++VL +C E M G+ ++ +
Sbjct: 324 EAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQVSVVSAL 383
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
V + + G L + + N ++W + + G
Sbjct: 384 VSMYSKLGKLDSSSLLFCCFT-EKNNILWNSMISG 417
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/584 (32%), Positives = 297/584 (50%), Gaps = 43/584 (7%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR- 134
F+ T L+ LY G + F+ +P+K + TWNS++S + +G + + F +L+
Sbjct: 152 FISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLV 211
Query: 135 SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
SE+ +F V+ D G +IH K GF + + VA SL++MY +
Sbjct: 212 SEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGI 268
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A +F D+ RD+ SWN +I L ++ N +AL++ M ++ + N T V ++ C
Sbjct: 269 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQ 328
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
L + IH VIK+ LE D+FV +AL++ YAK NLE A F ++ ++VSWN++
Sbjct: 329 LGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSI 388
Query: 315 ILGYASKSSPTSIFLLIELLQL-GYRPNEFTF----SHVLRSSLAFQLLQLHCLIIRMGY 369
I Y P + +QL G++P+ T S V +S +H I+R G+
Sbjct: 389 IAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGW 448
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
L+ D VV N + +Y + G + K+
Sbjct: 449 ------------------LMED-------------VVIGNAVVDMYAKLGLLDSAHKVFE 477
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLA 488
+ D++SWN +I A NG E +E++K M + I P+ T+VS+L A + + L
Sbjct: 478 IILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQ 537
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G +HG + KT + D FV LID+YGKCG + ++ +F ++ + +TW A+IS
Sbjct: 538 QGMRIHGRVIKTN-LHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCH 596
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
G++G A++ L+ F EM G KPD V +++L+AC H G V EG F R+ + YG++P
Sbjct: 597 GIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF-RLMQEYGIKPS 655
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ HY C+VDLL R G+L+ A I MP P+A IW L C+
Sbjct: 656 LKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACR 699
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 148/562 (26%), Positives = 274/562 (48%), Gaps = 46/562 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI-NRGFEPTQFTFGGLL-SCDSLNPVEG 58
+P ++V ++NS+ISAY G+ +A+ F ++ P +TF +L +C +L V+G
Sbjct: 177 IPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTL--VDG 234
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ K G F + FV +L+ +Y R G S+F+DMP + + +WN+++S +
Sbjct: 235 RRIHCWAFKLG-FQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ 293
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + E+ + + + V ++ D+ IH VIK+G +++L V
Sbjct: 294 NGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFV 353
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N+L+NMY + + A K F+ + I DVVSWN+II A ++++ A +++M ++
Sbjct: 354 SNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGF 413
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLEGAH 297
P+ T V + + A ++ +S+H +++ L DV +G+A+VD YAK L+ AH
Sbjct: 414 QPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAH 473
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR--PNEFTFSHVLRSSLAF 355
F I K+++SWN LI GYA + + ++++ PN+ T+
Sbjct: 474 KVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWV--------- 524
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF---VTALNIPRAVVPANIIA 412
S++ +YA G + + V N+ V A +
Sbjct: 525 ----------------------SILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLI 562
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G+ + + L Q+ + V+WN +I+ +G ++ L+LF M + PD+
Sbjct: 563 DVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHV 622
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIFN 531
TFVSLLSACS + G L+++ I S + C ++D+ G+ G + +
Sbjct: 623 TFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGC--MVDLLGRAGYLEMAYGFIK 680
Query: 532 EMT-DRNVITWTALISALGLNG 552
+M + W AL+ A ++G
Sbjct: 681 DMPLQPDASIWGALLGACRIHG 702
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 224/486 (46%), Gaps = 45/486 (9%)
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
F + +H L++ G + ++ LVN+Y + + F + +DV +WN++I A
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193
Query: 219 ESENFGKALE-LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
+ +F +A+ Y + V + P+ TF V+ +C L + G+ IH K + +V
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTL---VDGRRIHCWAFKLGFQWNV 250
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL- 336
FV ++L+ Y++ A F ++ +++ SWNA+I G + +++ ++L
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310
Query: 337 GYRPNEFTFSHVLR-----SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
G + N T +L ++ +L +H +I+ G E +V +L+ YAK G + D
Sbjct: 311 GIKMNFVTVVSILPVCPQLGDISTAML-IHLYVIKHGLEFDLFVSNALINMYAKFGNLED 369
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
A K Q+ D+VSWN +IAA N D
Sbjct: 370 AR--------------------------------KAFQQMFITDVVSWNSIIAAYEQNDD 397
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
F M+ PD T VSL S ++ + S+HG I + + D + N
Sbjct: 398 PVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGN 457
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG-FK 570
++DMY K G + S+ K+F + ++VI+W LI+ NG A A+E ++ ME
Sbjct: 458 AVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEII 517
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
P++ +++L A H G +++GM + R+ ++ + ++ C++D+ + G L +A
Sbjct: 518 PNQGTWVSILPAYAHVGALQQGMRIHGRVIKT-NLHLDVFVATCLIDVYGKCGRLVDAMS 576
Query: 631 IITTMP 636
+ +P
Sbjct: 577 LFYQVP 582
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 7/288 (2%)
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
+G +N E L S K+ A + +++ + + +Y G + +
Sbjct: 113 LGNQNEEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRC 172
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELF-KYMRAARIYPDNYTFVSLLSACSKLC 485
Q+ + D+ +WN +I+A HNG + E + F + + + I PD YTF +L AC L
Sbjct: 173 TFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV 232
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
+ G +H K + FV LI MY + G G + +F++M R++ +W A+I
Sbjct: 233 D---GRRIHCWAFKLGF-QWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMI 288
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
S L NG A +AL+ EM G K + V ++++L C G + M L +G+
Sbjct: 289 SGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAM-LIHLYVIKHGL 347
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
E ++ + ++++ ++G+L++A K M F + + W + + ++
Sbjct: 348 EFDLFVSNALINMYAKFGNLEDARKAFQQM-FITDVVSWNSIIAAYEQ 394
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 190/598 (31%), Positives = 297/598 (49%), Gaps = 41/598 (6%)
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+VLK+G F +D F+ L+ +Y R G +F++MP ++ VTW ++S + ++G E
Sbjct: 25 NVLKHG-FDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPE 83
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF-GEQIHGLVIKNGF-DYELLVANS 181
D + E++ +F I G Q+HG I+ G D ++ V N
Sbjct: 84 DACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNG 143
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+NMY +C I A +F + +D VSWN++I L +++ F A++ Y M + P+
Sbjct: 144 LINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPS 203
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ ++SCA L +LG+ H + IK L+ DV V + L+ YA+ L FS
Sbjct: 204 NFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFS 263
Query: 302 EISNKNIVSWNALILGYASKSSPTS--IFLLIELLQLGYRPNEFTFSHVLR--SSLAFQL 357
+ ++ VSWN +I A + S I + +E+++ G+ PN TF ++L SSL+
Sbjct: 264 WMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSK 323
Query: 358 L--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L Q+H LI++ ++ + +L+ Y KSG + + I+
Sbjct: 324 LSHQIHALILKYNVKDDNAIENALLACYGKSGEMENC-------------------EEIF 364
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+R ER D VSWN +I+ HN + ++L M D +TF
Sbjct: 365 SRMS------------ERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFA 412
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
++LSAC+ + L G +H + + SD + + L+DMY KCG I + + FN M
Sbjct: 413 TVLSACATVATLECGMEVHACAIRA-CLESDVVIGSALVDMYSKCGRIDYASRFFNLMPV 471
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
RN+ +W ++IS +G AL F M+ G PD + + VL+AC H GLV EG E
Sbjct: 472 RNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEY 531
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
F+ M YG+ P ++HY C+VDLL R G L + E I MP PN LIWRT L C R
Sbjct: 532 FKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCR 589
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 182/676 (26%), Positives = 306/676 (45%), Gaps = 78/676 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDS--LNPVE 57
MPDRN V++ +IS Y++ G EDA + MI GF P +F FG + +C L +
Sbjct: 61 MPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRK 120
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ ++ GL A VG L+ +Y + G +D SVF M K V+WNS+++
Sbjct: 121 GRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLD 180
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ ED + + + ++ + + + + + ++ + G+Q HG IK G D ++
Sbjct: 181 QNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVS 240
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES-ENFGKALELYLRMSVD 236
V+N+L+ +Y + + + +K+F + RD VSWNT+IGALA+S + +A+E++L M
Sbjct: 241 VSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRA 300
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
PN+ TF+ ++ + + L S L IHA ++K ++ D + +AL+ Y K +E
Sbjct: 301 GWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENC 360
Query: 297 HLCFSEIS-NKNIVSWNALILGYASKSSPTSIFLLIEL-LQLGYRPNEFTFSHVLRSSLA 354
FS +S ++ VSWN++I GY L+ L +Q G R + FTF+ VL +
Sbjct: 361 EEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACAT 420
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
L ++H IR E+ + +L+ Y+K G I A F + +
Sbjct: 421 VATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPV--------- 471
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
++ SWN +I+ A +G L LF M+ + PD
Sbjct: 472 -----------------------RNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPD 508
Query: 471 NYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ TFV +LSACS + + G + ++GL+ + E S ++D+ G+ G +
Sbjct: 509 HITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSC-------MVDLLGRAGEL 561
Query: 524 GSSVKIFNEMTDR-NVITWTALISALGL-NGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
N+M + N++ W ++ A NG + EM F P +L+
Sbjct: 562 DKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLF-NMDPQNAVNYVLLS 620
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEM-----------------DHYHCVVDLLVRYGH 624
G E M R R V+ E D+ H L+ Y
Sbjct: 621 NMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLI--YAK 678
Query: 625 LKEAEKIITTMPFPPN 640
LKE +K I + P
Sbjct: 679 LKELDKKIRDAGYVPQ 694
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 230/498 (46%), Gaps = 42/498 (8%)
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H V+K+GFD +L + N+L+N+Y + SA K+F ++ R+ V+W +I ++
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL----GKSIHAKVIKNAL-ECDVF 278
A + M + PN+ F I +C Q S+L G+ +H I+ L + V
Sbjct: 83 EDACGVLKEMIFEGFLPNRFAFGSAIRAC---QESMLWRRKGRQVHGYAIRTGLNDAKVA 139
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLG 337
VG+ L++ YAKC +++ A F + +K+ VSWN++I G +K ++ + + G
Sbjct: 140 VGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTG 199
Query: 338 YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
P+ F L S + L C++ +G + + + K GL D
Sbjct: 200 LMPSNFALISALSSCAS-----LGCIL--LGQQTHGEGI--------KLGLDMD------ 238
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG-DYKEVL 456
V +N + +Y T + E K+ S + D VSWN VI A A +G E +
Sbjct: 239 -------VSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAI 291
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
E+F M A P+ TF++LL+ S L L +H LI K + D + N L+
Sbjct: 292 EVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYN-VKDDNAIENALLAC 350
Query: 517 YGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
YGK G + + +IF+ M++ R+ ++W ++IS N +A++ M G + D
Sbjct: 351 YGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFT 410
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
VL+AC + GME+ R+ +E ++ +VD+ + G + A + M
Sbjct: 411 FATVLSACATVATLECGMEVHACAIRAC-LESDVVIGSALVDMYSKCGRIDYASRFFNLM 469
Query: 636 PFPPNALIWRTFLEGCQR 653
P N W + + G R
Sbjct: 470 PV-RNLYSWNSMISGYAR 486
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 7/167 (4%)
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
SD F+CN LI++Y + G S+ K+F+EM DRN +TW LIS NG + A +EM
Sbjct: 33 SDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEM 92
Query: 565 EFLGFKPDRVALIAVLTACRHGGL-VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYG 623
F GF P+R A + + AC+ L R+G ++ R+ + ++ + ++++ + G
Sbjct: 93 IFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCG 152
Query: 624 HLKEAEKIITTMPFPPNALIWRTFLEG-----CQRCRIAKYDTLNST 665
+ A + M +++ W + + G C + Y+++ T
Sbjct: 153 DIDHARSVFGLM-VDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKT 198
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 186/584 (31%), Positives = 296/584 (50%), Gaps = 43/584 (7%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR- 134
F+ T L+ LY G + F+ +P+K + WNS++S + +G + + F +L+
Sbjct: 152 FISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLV 211
Query: 135 SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
SE+ +F V+ D G +IH K GF + + VA SL++MY +
Sbjct: 212 SEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGI 268
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A +F D+ RD+ SWN +I L ++ N +AL++ M ++ + N T V ++ C
Sbjct: 269 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQ 328
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
L + IH VIK+ LE D+FV +AL++ YAK NLE A F ++ ++VSWN++
Sbjct: 329 LGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSI 388
Query: 315 ILGYASKSSPTSIFLLIELLQL-GYRPNEFTF----SHVLRSSLAFQLLQLHCLIIRMGY 369
I Y P + +QL G++P+ T S V +S +H I+R G+
Sbjct: 389 IAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGW 448
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
L+ D VV N + +Y + G + K+
Sbjct: 449 ------------------LMED-------------VVIGNAVVDMYAKLGLLDSAHKVFE 477
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLA 488
+ D++SWN +I A NG E +E++K M + I P+ T+VS+L A + + L
Sbjct: 478 IIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQ 537
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G +HG + KT + D FV LID+YGKCG + ++ +F ++ + +TW A+IS
Sbjct: 538 QGMKIHGRVIKTN-LHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCH 596
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
G++G A++ L+ F EM G KPD V +++L+AC H G V EG F R+ + YG++P
Sbjct: 597 GIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF-RLMQEYGIKPS 655
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ HY C+VDLL R G+L+ A I MP P+A IW L C+
Sbjct: 656 LKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACR 699
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/562 (26%), Positives = 274/562 (48%), Gaps = 46/562 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI-NRGFEPTQFTFGGLL-SCDSLNPVEG 58
+P ++V ++NS+ISAY G+ +A+ F ++ P +TF +L +C +L V+G
Sbjct: 177 IPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTL--VDG 234
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ K G F + FV +L+ +Y R G S+F+DMP + + +WN+++S +
Sbjct: 235 RKIHCWAFKLG-FQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ 293
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + E+ + + + V ++ D+ IH VIK+G +++L V
Sbjct: 294 NGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFV 353
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N+L+NMY + + A K F+ + I DVVSWN+II A ++++ A +++M ++
Sbjct: 354 SNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGF 413
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLEGAH 297
P+ T V + + A ++ +S+H +++ L DV +G+A+VD YAK L+ AH
Sbjct: 414 QPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAH 473
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR--PNEFTFSHVLRSSLAF 355
F I K+++SWN LI GYA + + ++++ PN+ T+
Sbjct: 474 KVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWV--------- 524
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF---VTALNIPRAVVPANIIA 412
S++ +YA G + + V N+ V A +
Sbjct: 525 ----------------------SILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLI 562
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G+ + + L Q+ + V+WN +I+ +G ++ L+LF M + PD+
Sbjct: 563 DVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHV 622
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIFN 531
TFVSLLSACS + G L+++ I S + C ++D+ G+ G + +
Sbjct: 623 TFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGC--MVDLLGRAGYLEMAYDFIK 680
Query: 532 EMT-DRNVITWTALISALGLNG 552
+M + W AL+ A ++G
Sbjct: 681 DMPLQPDASIWGALLGACRIHG 702
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 225/487 (46%), Gaps = 47/487 (9%)
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
F + +H L++ G + ++ LVN+Y + + F + +DV +WN++I A
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 193
Query: 219 ESENFGKALE-LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
+ +F +A+ Y + V + P+ TF V+ +C L + G+ IH K + +V
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTL---VDGRKIHCWAFKLGFQWNV 250
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL- 336
FV ++L+ Y++ A F ++ +++ SWNA+I G + +++ ++L
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310
Query: 337 GYRPNEFTFSHVLRSSLAFQL------LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
G + N T +L + QL + +H +I+ G E +V +L+ YAK G +
Sbjct: 311 GIKMNFVTVVSIL--PVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLE 368
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
DA K Q+ D+VSWN +IAA N
Sbjct: 369 DAR--------------------------------KAFQQMFITDVVSWNSIIAAYEQND 396
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
D F M+ PD T VSL S ++ + S+HG I + + D +
Sbjct: 397 DPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIG 456
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG-F 569
N ++DMY K G + S+ K+F + ++VI+W LI+ NG A A+E ++ ME
Sbjct: 457 NAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEI 516
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
P++ +++L A H G +++GM++ R+ ++ + ++ C++D+ + G L +A
Sbjct: 517 IPNQGTWVSILPAYAHVGALQQGMKIHGRVIKT-NLHLDVFVATCLIDVYGKCGRLVDAM 575
Query: 630 KIITTMP 636
+ +P
Sbjct: 576 SLFYQVP 582
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 7/288 (2%)
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
+G +N E L S K+ A + +++ + + +Y G + +
Sbjct: 113 LGNQNEEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRC 172
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELF-KYMRAARIYPDNYTFVSLLSACSKLC 485
Q+ + D+ +WN +I+A HNG + E + F + + + I PD YTF +L AC L
Sbjct: 173 TFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV 232
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
+ G +H K + FV LI MY + G G + +F++M R++ +W A+I
Sbjct: 233 D---GRKIHCWAFKLGF-QWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMI 288
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
S L NG A +AL+ EM G K + V ++++L C G + M L +G+
Sbjct: 289 SGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAM-LIHLYVIKHGL 347
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
E ++ + ++++ ++G+L++A K M F + + W + + ++
Sbjct: 348 EFDLFVSNALINMYAKFGNLEDARKAFQQM-FITDVVSWNSIIAAYEQ 394
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 194/654 (29%), Positives = 324/654 (49%), Gaps = 39/654 (5%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQA 63
N + +N +I G+ + AL + M+ P ++TF ++ +C LN V +
Sbjct: 109 NALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 168
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+ ++ F D FVG+AL+ LY +G + + VF+++P++ + WN ++ + K G
Sbjct: 169 NTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFN 228
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ M FC + S + ++ ++ + G Q+HGLVI +GF+++ VAN+LV
Sbjct: 229 NAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLV 288
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
MY +C ++ A K+F + D V+WN +I ++ +A L+ M V P+
Sbjct: 289 AMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSV 348
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
TF + S + K +H+ ++++ + DV++ SAL+D Y K ++E A F +
Sbjct: 349 TFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQN 408
Query: 304 SNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL---- 358
+ ++ A+I GY + +I L+Q G PN T + VL + A L
Sbjct: 409 TLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGK 468
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
+LHC I++ EN V ++ YAK G + A F
Sbjct: 469 ELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEF----------------------- 505
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
++ D + WN +I++ + NG + ++LF+ M + D+ + S L
Sbjct: 506 ---------FRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSAL 556
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
S+ + L L G +HG + + SSDTFV + LIDMY KCG + + +FN M +N
Sbjct: 557 SSAANLPALYYGKEMHGYVIRNAF-SSDTFVASALIDMYSKCGKLALARCVFNLMAGKNE 615
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
++W ++I+A G +G A+ L+ F EM G PD V + +++AC H GLV EG+ F
Sbjct: 616 VSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHC 675
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M R YG+ M+HY C+VDL R G L EA I +MPF P+A +W T L C+
Sbjct: 676 MTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACR 729
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 125/528 (23%), Positives = 234/528 (44%), Gaps = 36/528 (6%)
Query: 49 SCDSLNPVEGA-QLQASVLKNGL--FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS 105
+C + V+ A Q+ ++ G+ CA + + +LGLY G + + ++F + +
Sbjct: 53 ACSDASVVQQARQVHTQIIVGGMSDVCA---LSSRVLGLYVLCGRISDGGNLFFGLELCN 109
Query: 106 LVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHG 165
+ WN ++ G+ + + + +++ S V+ + +F VI ++ +H
Sbjct: 110 ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHN 169
Query: 166 LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
GF +L V ++L+ +Y I A ++F ++ RD + WN ++ +S +F
Sbjct: 170 TARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNN 229
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
A+ + M N T+ +++ CA LG +H VI + E D V + LV
Sbjct: 230 AMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVA 289
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFT 344
Y+KC NL A F+ + + V+WN LI GY + + L ++ G +P+ T
Sbjct: 290 MYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVT 349
Query: 345 FSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
F+ L S L L+ HC + +++ +P
Sbjct: 350 FASFLPSILESGSLR-HC---------------------------KEVHSYIVRHRVPFD 381
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
V + + IY + G K+ Q D+ +I+ +G + + F+++
Sbjct: 382 VYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQ 441
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+ P++ T S+L AC+ L L LG LH I K + + + V + + DMY KCG +
Sbjct: 442 EGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQ-LENIVNVGSAITDMYAKCGRLD 500
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
+ + F M++ + I W ++IS+ NG + A++ FR+M G K D
Sbjct: 501 LAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFD 548
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 3/240 (1%)
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ G+Y G+ ++ L LE + + WN +I G + L + M + + PD
Sbjct: 85 VLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPD 144
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
YTF ++ AC L N+ L +H + D FV + LI +Y G I + ++F
Sbjct: 145 KYTFPYVIKACGGLNNVPLCMVVHNTARSLG-FHVDLFVGSALIKLYADNGYICDARRVF 203
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+E+ R+ I W ++ +G A+ F M + V +L+ C G
Sbjct: 204 DELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFC 263
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G ++ + S G E + + +V + + G+L +A K+ TMP + + W + G
Sbjct: 264 LGTQVHGLVIGS-GFEFDPQVANTLVAMYSKCGNLFDARKLFNTMP-QTDTVTWNGLIAG 321
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
M +N VS+NSII+AY G + L +F M+ G P TF ++S C V EG
Sbjct: 610 MAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEG 669
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
+ + A ++ LYGR G L E + MP W +++
Sbjct: 670 IHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACR 729
Query: 118 KHGFVE 123
HG VE
Sbjct: 730 LHGNVE 735
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 189/601 (31%), Positives = 305/601 (50%), Gaps = 41/601 (6%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G +L A+ L++G AD F G L+ Y G + VF++MP + +V+WNS+VS F
Sbjct: 94 KGLELHAAALRSG-HLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSF 152
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ +D ++RS V + +S V V+ EQ+ FG +HGLV+K G D +
Sbjct: 153 LANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIV 212
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ N+LV+MY + + ++ K+F+ + R+ VSWN+ IG + +G L L+ MS
Sbjct: 213 NLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSER 272
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
P T ++ + L LG+ +H IK A+E D+FV ++LVD YAK +LE A
Sbjct: 273 GFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKA 332
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF 355
F +I +N+VSWNA+I + + F L+I++ + G PN T ++L +
Sbjct: 333 CAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRM 392
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L Q+H IR G ++ +L+ YAK G L + +++
Sbjct: 393 ASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCG----------QLRLAQSIF----- 437
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
L D VS+N +I + + E L LFK + + I D
Sbjct: 438 ------------------DLSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDA 479
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+F+ L+AC+ L + G +HG++ + ++S+ F+ N L+ +Y K G + ++ KIFN
Sbjct: 480 ISFMGALTACTNLSSFKQGKEIHGVLVR-RLLSNHPFLANTLLGLYTKGGMLDTASKIFN 538
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ +++V +W +I G++G A F M+ G D V+ IAVL+ C HGGLV
Sbjct: 539 RIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVER 598
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G + F M + +EP+ HY C+VDLL R G L E+ +II MPF N+ +W L C
Sbjct: 599 GKKYFSHM-LAQNLEPQQMHYACMVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGAC 657
Query: 652 Q 652
+
Sbjct: 658 R 658
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 171/609 (28%), Positives = 285/609 (46%), Gaps = 87/609 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
MP R+VVS+NS++S++ +DA + L M+ G L+S VE
Sbjct: 137 MPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSG---VPVNVASLVSVVPACGVEQEG 193
Query: 58 --GAQLQASVLKNGLFCADAFV--GTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
G + VLK GL D+ V G AL+ +YG+ G ++ + VFE MP ++ V+WNS +
Sbjct: 194 GFGLGVHGLVLKTGL---DSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAI 250
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
F G D + LF + + ++ L + G ++HG IK +
Sbjct: 251 GCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAME 310
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL----AESENFGKALEL 229
++ VANSLV+MY + + A +F+ +E+R+VVSWN +I L AESE FG L
Sbjct: 311 LDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFG----L 366
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
++M D PN T V ++ +C+ + + GK IHA I+ L D+F+ +AL+D YAK
Sbjct: 367 VIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAK 426
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
C L A F ++S K+ VS+N LILGY+ S S S+ L +L +G + +F
Sbjct: 427 CGQLRLAQSIF-DLSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGA 485
Query: 349 LRS----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
L + S Q ++H +++R N+ ++ +L+
Sbjct: 486 LTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLL------------------------ 521
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
G+Y + G + K+ ++++ D+ SWN +I +G LF M+
Sbjct: 522 --------GLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKD 573
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM---------LID 515
+ D+ +++++LS CS GL+++ + S N+ ++D
Sbjct: 574 HGVTYDHVSYIAVLSVCSH----------GGLVERGKKYFSHMLAQNLEPQQMHYACMVD 623
Query: 516 MYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFKP 571
+ G+ G + SV+I +M N W AL+ A ++G AQ A + E+ KP
Sbjct: 624 LLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFEL-----KP 678
Query: 572 DRVALIAVL 580
+ +VL
Sbjct: 679 EHSGYYSVL 687
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 106/218 (48%), Gaps = 12/218 (5%)
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL--GSSLHGL 496
WN + A + E L ++ +M + + PD+ TF L A + G LH
Sbjct: 42 WNSLSRALSSASLPTEALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPAKGLELHAA 101
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
++ ++ D F N L+ Y CG G + ++F+EM R+V++W +L+S+ N
Sbjct: 102 ALRSGHLA-DVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDD 160
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTAC---RHGGLVREGMELFERMNRSYGVEPEMDHYH 613
A + M G + +L++V+ AC + GG G+ + + ++ G++ ++ +
Sbjct: 161 ARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGF---GLGVHGLVLKT-GLDSIVNLGN 216
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+VD+ ++GH++ + K+ MP N + W + + GC
Sbjct: 217 ALVDMYGKFGHVEASMKVFEGMP-ERNEVSWNSAI-GC 252
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 176/641 (27%), Positives = 313/641 (48%), Gaps = 34/641 (5%)
Query: 32 MINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCL 91
M+ GF PT F LL + A + + + D +L Y G +
Sbjct: 43 MVVSGFVPTAFVSNCLLQ---MYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDI 99
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
V++F+ MP +V+WN++VS + + G ++ + LF E+ R V+ ++F ++
Sbjct: 100 STAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSC 159
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
S ++L G Q+H L +K G + ++ ++LV+MY +C + A F + R+ VSW
Sbjct: 160 SALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWG 219
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
+ I ++E + + LEL++ M + +Q ++ SCA + G+ +HA IKN
Sbjct: 220 SAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKN 279
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI 331
D VG+A+VD YAK ++L A F + N + + NA+++G +F++
Sbjct: 280 KFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG---------LFMIR 330
Query: 332 ELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIR-------------------MGYENY 372
++ FS + F Q+HCL I+ G +
Sbjct: 331 SSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVLDLYGKCKALMEAYLIFQGMKQK 390
Query: 373 EYV-LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
+ V +++ + ++G D + + A V A+ + +Y + G +E KL ++
Sbjct: 391 DSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFV-ASTVVDMYCKCGIIDEAQKLHDRI 449
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
+VSWN +++ + N + + + F M + PD++TF ++L C+ L + LG
Sbjct: 450 GGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGK 509
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+HG I K E++ D ++ + L+DMY KCG + S+ +F ++ R+ ++W A+I L+
Sbjct: 510 QIHGQIIKQEMLD-DEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALH 568
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G AL F M+ P+ +AVL AC H GL +G F M Y +EP+++H
Sbjct: 569 GLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEH 628
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ C+VD+L R +EA K I +MPF +A+IW+T L C+
Sbjct: 629 FACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICK 669
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 156/598 (26%), Positives = 276/598 (46%), Gaps = 92/598 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MPD +VVS+N+++S Y + G ++++ +F+ M RG P + TF LL SC +L + G
Sbjct: 109 MPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLG 168
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A +K GL D G+AL+ +YG+ LD+ + F MP ++ V+W S ++
Sbjct: 169 VQVHALAVKTGLEI-DVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGSAIA---- 223
Query: 119 HGFVEDCMF-----LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
G V++ + LF E+ R + +++ S+ + L G Q+H IKN F
Sbjct: 224 -GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFS 282
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMF-----KDVE-----------IR-----DVVSWNT 212
+ +V ++V++Y + + A + F VE IR DVVS +
Sbjct: 283 SDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLFMIRSSIRFDVVSLSG 342
Query: 213 IIGALAESENFGKALELY---LRMSVDIVFPNQTTF-VYVINSCAGLQNSILGKSIHAKV 268
+ A AE++ + +++ ++ +D+ + Y+I ++S+ +I A +
Sbjct: 343 VFSACAETKGYFPGQQVHCLAIKSVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAAL 402
Query: 269 IKNA------------LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+N L D FV S +VD Y KC ++ A I + +VSWNA++
Sbjct: 403 EQNGHYDDTILHFNEMLRFDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILS 462
Query: 317 GYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYEN 371
G++ +K S + E+L +G +P+ FTF+ VL + + Q+H II+ +
Sbjct: 463 GFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLD 522
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
EY+ +L+ YAK G + D+L + ++
Sbjct: 523 DEYISSTLVDMYAKCGDMPDSLL--------------------------------VFEKV 550
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
E+ D VSWN +I A +G E L +F+ M+ + P++ TFV++L ACS + G
Sbjct: 551 EKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGC 610
Query: 492 SLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALIS 546
L+ + + F C ++D+ G+ +VK N M + + W L+S
Sbjct: 611 RYFHLMTTHYKLEPQLEHFAC--MVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 666
>gi|218186285|gb|EEC68712.1| hypothetical protein OsI_37194 [Oryza sativa Indica Group]
Length = 787
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 193/670 (28%), Positives = 327/670 (48%), Gaps = 54/670 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP RN+VS+ +++SA +R G R F+ MI GF P +F +L+ C S+
Sbjct: 89 MPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFALATMLTACHSMLAHSSN 148
Query: 60 QLQASVLKNGL-----FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+L ++ +G+ ++ FVG++LL +Y +HG + F + K L WN+++
Sbjct: 149 KLPIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLE 208
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ +GF + + S +A +++ + S + G Q+H LVI + +
Sbjct: 209 GYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQWDLGRQLHCLVIHSMLES 268
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V NSLV+MYF+ +A +F+ + +D VSWNT+ A E+ + MS
Sbjct: 269 NTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMS 328
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
PN+ TF ++ +N+ LG I A ++ +V V +A+++ +C L+
Sbjct: 329 RTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLD 388
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A+ F ++ +NIV+WN +I GY S S ++ L L+ +G RP+EFT+S VL
Sbjct: 389 RAYGFFCSLTFRNIVTWNEIIAGYGLFSRSEDAMRLFRSLVCIGERPDEFTYSAVLS--- 445
Query: 354 AFQLL-------QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
AFQ Q+H +I++ G+ + ++V SL+ + +A AF
Sbjct: 446 AFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKA--------NAAAF----------- 486
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
G ++K++ + ++VSW +I+A +G EV+ LF R
Sbjct: 487 ------------GSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDS 534
Query: 467 I-YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF-VCNMLIDMYGKCGSIG 524
PD + ++L+AC+ + +H L+ KT S+ F V + ++D Y KCG I
Sbjct: 535 TNKPDEFILATVLNACANAALIRHCRCIHSLVLKTG--HSNHFCVASAVVDAYAKCGEIT 592
Query: 525 SSVKIFNEMTD--RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
S+ F ++ + I + +++A +G AL + EM P +A+L+A
Sbjct: 593 SAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSA 652
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H GLV +G F M +YG+ PE +Y C+VDLL R G L EA+ +I MPF P
Sbjct: 653 CSHLGLVEQGKLAFSTMLSAYGMHPERANYACLVDLLARKGLLDEAKGVIDAMPFQPWPA 712
Query: 643 IWRTFLEGCQ 652
+WR+ + GC+
Sbjct: 713 VWRSLVNGCR 722
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 159/596 (26%), Positives = 266/596 (44%), Gaps = 61/596 (10%)
Query: 73 ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL 132
A F LL Y R G LD + VF++MP ++LV+W ++VS ++G F +
Sbjct: 61 AHTFNMNYLLIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSM 120
Query: 133 VRSEVALTE---SSFVGVIHGL--SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYF 187
+RS E ++ + H + + L +HG+ ++ G D V +SL+ MY
Sbjct: 121 IRSGFCPNEFALATMLTACHSMLAHSSNKLPIALSLHGVAVRAGLDSNPFVGSSLLLMYA 180
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG-KALELYLRMSVDIVFPNQTTFV 246
+ I +A++ F + +D+ WN ++ S FG A+ L M + P++ T++
Sbjct: 181 KHGRIAAAQRAFAHIRNKDLTCWNAMLEGYV-SNGFGHHAISTVLVMHHSGLAPDRYTYI 239
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
+ +C+ LG+ +H VI + LE + V ++LVD Y + E A F +I K
Sbjct: 240 SAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQK 299
Query: 307 NIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQL----LQLH 361
+ VSWN + G+A ++F LI++ + G++PNE TFS +LR S A + LQ+
Sbjct: 300 DTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIF 359
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
L R GY + V +++ + GL+ A F +L
Sbjct: 360 ALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTF-------------------- 399
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
+IV+WN +IA ++ + LF+ + PD +T+ ++LSA
Sbjct: 400 ------------RNIVTWNEIIAGYGLFSRSEDAMRLFRSLVCIGERPDEFTYSAVLSAF 447
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC-GSIGSSVKIFNEMTDRNVIT 540
+ +H +I K + +S FV LI GS+ SS+KI + +++
Sbjct: 448 QEAHGARDHEQIHAIILK-QGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVS 506
Query: 541 WTALISALGLNGFAQRALEKFREMEFLG---FKPDRVALIAVLTACRHGGLVREGMELFE 597
W A+ISA +G + F F G KPD L VL AC + L+R
Sbjct: 507 WGAIISAFLKHGLNDEVIFLFN--LFRGDSTNKPDEFILATVLNACANAALIRHC----- 559
Query: 598 RMNRSYGVEPEMDHYHC----VVDLLVRYGHLKEAEKIITTMPFPPN-ALIWRTFL 648
R S ++ ++ C VVD + G + AE T + N A+++ T L
Sbjct: 560 RCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTML 615
>gi|302798965|ref|XP_002981242.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
gi|300151296|gb|EFJ17943.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
Length = 734
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 190/660 (28%), Positives = 327/660 (49%), Gaps = 51/660 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
+ D+N +N +IS Y+R G +AL +F M P F F L +C L +E G
Sbjct: 75 IADKNDFVWNLMISGYARSGKNREALELFHKM---DIPPNGFIFASALAACAGLGDLEQG 131
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ VL++ +D V +L+ +Y R G + E + +F+ MPRK+LV+WN+++S F +
Sbjct: 132 REIHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQ 191
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ E + L+ + R + F ++ ++ +LE G IH + G ++++
Sbjct: 192 CDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLELGSSIHQRITSLGLQRDIVM 251
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+NMY +C + A ++F + RDV +W ++I A+ +A Y M D V
Sbjct: 252 ENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDGMRRDCV 311
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P TFV ++++C+ L+ GK +H +V E V +AL+ Y++C +LE A
Sbjct: 312 SPTSATFVALLSACSTLEQ---GKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEF 368
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+++ K+ VSW+A++ +A P ++ L +++ G + + TF L++ +
Sbjct: 369 LFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRD 428
Query: 358 LQLHCLIIRM----GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+L I + G + + + L+++Y+K
Sbjct: 429 SRLSKTIRELIDWSGIDKMDSIRADLVSAYSK---------------------------- 460
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
G E K+ ++E D+++W ++I A GD K LELF M+ + PD+ T
Sbjct: 461 ----CGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVT 516
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F S+L ACS NL G +H I + F+ N LI+MY +CGS+ + +IF M
Sbjct: 517 FSSVLQACS---NLEDGREVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESM 573
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+ I+W+A+++ +G ++ +R M G PD V LIA+L +C H GL E
Sbjct: 574 DRSSRISWSAIMTLCARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEAC 633
Query: 594 ELFERMNRSYGVEPEMD-HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F + + + P +D HY C+VDLL R G L EAE++I +M P+ + T L C+
Sbjct: 634 HYFTWIISDFEL-PHLDEHYQCMVDLLCRAGRLDEAEELI-SMIDRPDVVTLNTMLAACK 691
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 161/611 (26%), Positives = 290/611 (47%), Gaps = 52/611 (8%)
Query: 50 CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
C N EG +L + ++G + +++ ++ +Y + GCL + + F+++ K+ W
Sbjct: 25 CSRRNVSEGRRLHDDLRRSG-YGDSSYLRRCVVQMYAKCGCLADAKAAFDEIADKNDFVW 83
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
N ++S + + G + + LF ++ +S + GL DLE G +IH V++
Sbjct: 84 NLMISGYARSGKNREALELFHKMDIPPNGFIFASALAACAGLG---DLEQGREIHKRVLE 140
Query: 170 N-GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
+ +++V NSLV MY +C + K+F + +++VSWN +I A + + +ALE
Sbjct: 141 SPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDYPEQALE 200
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
LY RM + + PN F ++ +CA L N LG SIH ++ L+ D+ + +AL++ Y+
Sbjct: 201 LYHRMKRERLEPNGFVFASLLTACASLGNLELGSSIHQRITSLGLQRDIVMENALINMYS 260
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
KC ++ A FS ++ +++ +W ++I GYA QLG+ F F
Sbjct: 261 KCGCMDEALEVFSGLATRDVFTWTSMIAGYA---------------QLGFGSEAFAFYDG 305
Query: 349 LR------SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
+R +S F L C + G +E V A
Sbjct: 306 MRRDCVSPTSATFVALLSACSTLEQGKHLHEE---------------------VKAFGFE 344
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
V + +Y+R G + L +++++ D VSW+ ++ + A GD + L LF+ M
Sbjct: 345 SITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQM 404
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ TF S L ACS + L ++ LI + I D+ + L+ Y KCG
Sbjct: 405 ILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRAD-LVSAYSKCGD 463
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ + KIF+ M R+V+TWT +I G ++ ALE F M+ G +PD V +VL A
Sbjct: 464 MEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQA 523
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C + + +G E+ R+ + G + + ++++ R G +++A +I +M + +
Sbjct: 524 CSN---LEDGREVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMD-RSSRI 579
Query: 643 IWRTFLEGCQR 653
W + C R
Sbjct: 580 SWSAIMTLCAR 590
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 144/527 (27%), Positives = 247/527 (46%), Gaps = 54/527 (10%)
Query: 135 SEVALTESS---FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
S AL ES + ++ + +++ G ++H + ++G+ + +V MY +C
Sbjct: 5 SGAALKESEVSRYARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGC 64
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
+ A+ F ++ ++ WN +I A S +ALEL+ +M + PN F + +
Sbjct: 65 LADAKAAFDEIADKNDFVWNLMISGYARSGKNREALELFHKMDIP---PNGFIFASALAA 121
Query: 252 CAGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDN-LEGAHLCFSEISNKNIV 309
CAGL + G+ IH +V+++ ++ DV V ++LV YA+C + LEG + F + KN+V
Sbjct: 122 CAGLGDLEQGREIHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKI-FDAMPRKNLV 180
Query: 310 SWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGY 369
SWNA+I + P Q L+L+ + R
Sbjct: 181 SWNAMISAFVQCDYPE------------------------------QALELYHRMKRERL 210
Query: 370 ENYEYVLGSLMTSYAKSG---LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
E +V SL+T+ A G L S +T+L + R +V N + +Y++ G +E ++
Sbjct: 211 EPNGFVFASLLTACASLGNLELGSSIHQRITSLGLQRDIVMENALINMYSKCGCMDEALE 270
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+ S L D+ +W +IA A G E + MR + P + TFV+LLSACS
Sbjct: 271 VFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDGMRRDCVSPTSATFVALLSACS---T 327
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L G LH +K S T V L+ MY +CGS+ + +F +M ++ ++W+A+++
Sbjct: 328 LEQGKHLHEEVKAFG-FESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVT 386
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
+ G +AL FR+M G + + L AC R + E ++ S G++
Sbjct: 387 SHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWS-GID 445
Query: 607 PEMDHYHCVVDLLVRY---GHLKEAEKIITTMPFPPNALIWRTFLEG 650
+MD DL+ Y G ++EA KI M + L W ++G
Sbjct: 446 -KMDSIR--ADLVSAYSKCGDMEEARKIFDRME-SRDVLTWTVMIKG 488
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 215/455 (47%), Gaps = 44/455 (9%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQ 62
R+V ++ S+I+ Y++ G+ +A + M PT TF LLS C +L +G L
Sbjct: 278 RDVFTWTSMIAGYAQLGFGSEAFAFYDGMRRDCVSPTSATFVALLSACSTLE--QGKHLH 335
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
V G F + V TAL+ +Y R G L++ +F M +K V+W+++V+ + G
Sbjct: 336 EEVKAFG-FESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDP 394
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ LF +++ + L+ +F + S ++D + I L+ +G D + L
Sbjct: 395 GKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADL 454
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
V+ Y +C + A K+F +E RDV++W +I A+ + ALEL+ RM + V P+
Sbjct: 455 VSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDS 514
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TF V+ +C+ L++ G+ +HA+++ + F+G+ L++ YA+C ++ A F
Sbjct: 515 VTFSSVLQACSNLED---GREVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFE 571
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLLQL 360
+ + +SW+A++ A I L+ G P+ T
Sbjct: 572 SMDRSSRISWSAIMTLCARHGQHDDIIDTYRLMVNEGVVPDGVT---------------- 615
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF----VTALNIPRAVVPANIIAGIYN 416
L +++ S + +GL +A + ++ +P + +
Sbjct: 616 ---------------LIAILNSCSHAGLTDEACHYFTWIISDFELPHLDEHYQCMVDLLC 660
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
R G+ +E +L+S ++RPD+V+ N ++AAC + D
Sbjct: 661 RAGRLDEAEELISMIDRPDVVTLNTMLAACKNQQD 695
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 114/238 (47%), Gaps = 10/238 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M R+V+++ +I Y++ G + AL +F M G EP TF +L +C +L +G
Sbjct: 474 MESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSNLE--DGR 531
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ A +L F+G L+ +Y R G + + +FE M R S ++W++I+++ +H
Sbjct: 532 EVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTLCARH 591
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G +D + + +V V + + +++ S+ + +I D+EL
Sbjct: 592 GQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEACHYFTWIIS---DFELPHL 648
Query: 180 NS----LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ +V++ + + AE++ ++ DVV+ NT++ A ++ + +M
Sbjct: 649 DEHYQCMVDLLCRAGRLDEAEELISMIDRPDVVTLNTMLAACKNQQDLHRGARTAAQM 706
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 176/621 (28%), Positives = 308/621 (49%), Gaps = 36/621 (5%)
Query: 38 EPTQFTFGGLLS----CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDE 93
+ + F G S C + + S++++ D +G L+ +Y + G L E
Sbjct: 144 QNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKE 203
Query: 94 VVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
VF+ + + WN ++S + G + + LF +++ + +F ++ +
Sbjct: 204 GRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAA 263
Query: 154 EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTI 213
+E G Q+HGL+ K GF+ V NSL++ YF + A+K+F ++ RDV+SWN++
Sbjct: 264 VARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSM 323
Query: 214 IGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA- 272
I ++ + +E++++M V V + T V V +CA + +LGK +H+ IK A
Sbjct: 324 ISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAAT 383
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLI 331
L+ +V + L+D Y+KC +L A F + K +VSW ++I GY + S +I L
Sbjct: 384 LDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFD 443
Query: 332 ELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
E+ G P+ + + +L + C I N G ++ Y +
Sbjct: 444 EMKSRGVVPDVYAVTSILNA----------CAI------NGNLKSGKIVHDYIREN---- 483
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
N+ +N + +Y + G + + S +++ D++SWN +I N
Sbjct: 484 --------NLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSL 535
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
E L LF M+ PD T +L AC+ L L G +HG + S D +V N
Sbjct: 536 PNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGY-SEDKYVTN 593
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
++DMY KCG + + +F+ + ++++++WT +I+ G++G+ A+ F +M G +P
Sbjct: 594 AVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEP 653
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D V+ I++L AC H GL+ EG ++F M + +EP ++HY C+VDLL R G+L +A K
Sbjct: 654 DEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKF 713
Query: 632 ITTMPFPPNALIWRTFLEGCQ 652
I MP P+A IW L GC+
Sbjct: 714 IKAMPIKPDATIWGALLCGCR 734
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/576 (25%), Positives = 268/576 (46%), Gaps = 44/576 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
+ + + +N +IS YS G +++ +F M+ G +P +TF +L C + EG
Sbjct: 211 LSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEG 270
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + K G + V +L+ Y + +F+++ + +++WNS++S + K
Sbjct: 271 RQVHGLICKLGFNSYNTVV-NSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVK 329
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELL 177
+G + + +F +++ V + ++ V V +N L G+ +H IK D E+
Sbjct: 330 NGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVR 389
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
N+L++MY +C + SA ++F+ ++ + VVSW ++I A++L+ M
Sbjct: 390 FNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRG 449
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ ++N+CA N GK +H + +N LE + FV +AL D YAKC +++ AH
Sbjct: 450 VVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAH 509
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
FS + K+++SWN +I GY S P L +Q +P+ T + +L + +
Sbjct: 510 DVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESKPDGTTVACILPACASLAA 569
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L ++H +R GY +YV +++ Y K GL+ A +
Sbjct: 570 LDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARS------------------- 610
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
L + D+VSW ++IA +G E + F MR I PD +
Sbjct: 611 -------------LFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVS 657
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F+S+L ACS L G + ++KK I + ++D+ + G++ + K M
Sbjct: 658 FISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAM 717
Query: 534 TDR-NVITWTALISALGLN---GFAQRALEKFREME 565
+ + W AL+ ++ A++ E+ E+E
Sbjct: 718 PIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELE 753
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
GD K +EL + + D + S+L C++ ++ G + +I+ + ++ D +
Sbjct: 131 GDLKNAMELLCSSQNSNF--DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMI-DGIL 187
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
L+ MY KCG + +F+++++ + W +IS +G ++ F++M LG
Sbjct: 188 GVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGI 247
Query: 570 KPDRVALIAVLTACRHGGLVREGMEL 595
KP+ ++L V EG ++
Sbjct: 248 KPNSYTFSSILKCFAAVARVEEGRQV 273
>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Vitis vinifera]
Length = 744
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 200/670 (29%), Positives = 322/670 (48%), Gaps = 52/670 (7%)
Query: 38 EPTQFTFGGLLSCDSLNPVEGA-QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS 96
EP F + L + ++ ++ Q A ++ +G + + F+ + L+ LY
Sbjct: 30 EPNDFNYLNHLLSNQISSLKTLLQSHAFIITSG-YSNNIFIASKLISLYASFHKPSCSTE 88
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F+++P + WNSI+ +G + + + SE + ++ + +
Sbjct: 89 LFDEIPHRDAFLWNSIIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELEL 148
Query: 157 LEFGEQIHGLVIKNG-FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
+ +G IHGLV K G F V +S V MY +C + A +F ++ RDVV+W ++
Sbjct: 149 VNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFRDVVAWTALVI 208
Query: 216 ALAESENFGKALELYL---RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
++ LE R+ D PN T +C L + G+ +H V+K
Sbjct: 209 GCVQNGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTG 268
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS-IFLLI 331
++ V S L+ Y+KC N E AH F E+ NK+I+SW ++I Y+ T I +
Sbjct: 269 MDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFW 328
Query: 332 ELLQLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
E+L G P+ S +L S F+ H LIIR Y + V +L++ Y K G
Sbjct: 329 EMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFG 388
Query: 388 LISDALAFVTALN-------------------------------IPRAVVPANIIAGIYN 416
+ A F +N + V N + +Y
Sbjct: 389 FLKLAEKFFGRVNEQNFEAWNLMVSGYGATHLARSIHCYMIKNLMDENVSVNNSLIDMYG 448
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
++G ++ ++ R DIV+WN +I++ AH G + E L L+ M + P++ T VS
Sbjct: 449 KSGNLTIARRIFCRIPR-DIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVS 507
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+LSACS L +L G +H I + + + LIDMY KCG + S +IFN M +R
Sbjct: 508 VLSACSHLASLEEGEKVHNYINGGKF-EFNLSIATALIDMYAKCGQLEKSREIFNSMHER 566
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+VITW +IS G++G A+ A+E F++ME KP+ + +AVL+AC H GLV+EG LF
Sbjct: 567 DVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLF 626
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ---- 652
+M + Y V P + HY C+VDLL R G+L+EAE ++ +MP P+ +W L C+
Sbjct: 627 GKM-QDYSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGALLSSCKIHNE 685
Query: 653 ---RCRIAKY 659
RIAK+
Sbjct: 686 IEMGIRIAKH 695
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 210/474 (44%), Gaps = 72/474 (15%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQ 60
+++++S+ S+ISAYSR G+ + + MF M+ G P +LS +S+ E
Sbjct: 301 NKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKA 360
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+++ + D V ALL +Y + G L F + ++ WN +VS +G
Sbjct: 361 FHGLIIRRH-YTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGA-- 417
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
L RS IH +IKN D + V N
Sbjct: 418 ---------THLARS---------------------------IHCYMIKNLMDENVSVNN 441
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL++MY + + A ++F + RD+V+WNT+I + A +F +AL LY +M ++ + P
Sbjct: 442 SLIDMYGKSGNLTIARRIFCRIP-RDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKP 500
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N T V V+++C+ L + G+ +H + E ++ + +AL+D YAKC LE + F
Sbjct: 501 NSATLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIF 560
Query: 301 SEISNKNIVSWNALILGYASKSSPTS-IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
+ + +++++WN +I GY S I ++ + +PN TF VL +
Sbjct: 561 NSMHERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPNGLTFLAVLSAC------- 613
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
H +++ G +Y+ G + + A N+ +++ R+G
Sbjct: 614 AHAGLVKEG----KYLFGKMQD-------------YSVAPNLKHYACMVDLLG----RSG 652
Query: 420 QYNETVKL-LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
E L LS PD W ++++C + + + + + K+ + + D Y
Sbjct: 653 NLQEAEALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVENDGY 706
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 268/503 (53%), Gaps = 25/503 (4%)
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEK---MFKDVEIRDVVSWNTIIGALAESE 221
G+ +N F Y L++ CA + A+ +F + D S+N ++ ALA+
Sbjct: 75 GMPHRNTFSYNALLS--------ACARLGRADDALALFGAIPDPDQCSYNAVVAALAQHG 126
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
G AL M D N +F +++CA + S G+ +HA V K++ DV++G+
Sbjct: 127 RGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGT 186
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT--SIFLLIELLQLGYR 339
ALVD YAKC+ E A F + +NIVSWN+LI Y ++ P ++ L + +++ G+
Sbjct: 187 ALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCY-EQNGPVDEALALFVRMMKDGFV 245
Query: 340 PNEFTFSHVLRS----SLAFQLLQLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALA 394
P+E T + V+ + + + Q+H +++ + VL +L+ YAK G +A
Sbjct: 246 PDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKC 305
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
+ I V ++I G Y ++ + + Q+ ++V+WN++IA AHN + +E
Sbjct: 306 VFDRMAIRSVVSETSMITG-YAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEE 364
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI-----ISSDTFV 509
L LF ++ ++P +YT+ ++L+AC+ L NL LG H + K SD FV
Sbjct: 365 ALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFV 424
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
N L+DMY K GSI K+F M R+ ++W A+I NG A+ AL F M
Sbjct: 425 GNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNE 484
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
+PD V +I VL+AC H GLV+EG F+ M +G+ P DHY C++DLL R GHLKE E
Sbjct: 485 RPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVE 544
Query: 630 KIITTMPFPPNALIWRTFLEGCQ 652
++I MP P+A++W + L C+
Sbjct: 545 ELIENMPMEPDAVLWASLLGACR 567
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 148/588 (25%), Positives = 258/588 (43%), Gaps = 116/588 (19%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKN 68
N+++SAY+R G + DA R+F M +R F++ LLS
Sbjct: 53 LNTLLSAYARLGSLHDARRVFDGMPHR----NTFSYNALLSA------------------ 90
Query: 69 GLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFL 128
CA R G D+ +++F +P ++N++V+ +HG D +
Sbjct: 91 ---CA-------------RLGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRF 134
Query: 129 FCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
+ + L SF + ++E+ GEQ+H LV K+ ++ + +LV+MY +
Sbjct: 135 LAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAK 194
Query: 189 CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYV 248
C A+K+F + R++VSWN++I ++ +AL L++RM D P++ T V
Sbjct: 195 CERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASV 254
Query: 249 INSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCD---------------- 291
+++CAGL G+ +H +++K + D+ + +ALVD YAKC
Sbjct: 255 MSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRS 314
Query: 292 ---------------NLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQ 335
N+ A F ++ KN+V+WN LI YA S ++ L + L +
Sbjct: 315 VVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKR 374
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
P +T+ +VL + LQL H +++ G+ SG SD
Sbjct: 375 ESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFR-------------FDSGPESD 421
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
V N + +Y +TG ++ K+ ++ D VSWN +I A NG
Sbjct: 422 -------------VFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGR 468
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIIS 504
K+ L LF+ M + PD+ T + +LSAC + G + HG+I +
Sbjct: 469 AKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIP-----T 523
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLN 551
D + C +ID+ G+ G + ++ M + + + W +L+ A L+
Sbjct: 524 RDHYTC--MIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLH 569
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 225/492 (45%), Gaps = 78/492 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+PD + S+N++++A ++ G DALR M F ++F LS C S G
Sbjct: 107 IPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTG 166
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A V K+ +D ++GTAL+ +Y + +E VF+ MP +++V+WNS+++ + +
Sbjct: 167 EQVHALVTKSS-HGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQ 225
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELL 177
+G V++ + LF +++ E + V+ + G Q+H ++K + F +++
Sbjct: 226 NGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMV 285
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG------------- 224
+ N+LV+MY +C W A+ +F + IR VVS ++I A+S N G
Sbjct: 286 LNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKN 345
Query: 225 ------------------KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
+AL L++R+ + V+P T+ V+N+CA L N LG+ H
Sbjct: 346 VVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHV 405
Query: 267 KVIKNAL------ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
V+K E DVFVG++LVD Y K ++ F ++ ++ VSWNA+I+GYA
Sbjct: 406 HVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQ 465
Query: 321 KSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
LL E +L RP+ T VL
Sbjct: 466 NGRAKDALLLFERMLCSNERPDSVTMIGVL------------------------------ 495
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RP 434
++ SGL+ + + ++ ++P + + R G E +L+ + P
Sbjct: 496 -SACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEP 554
Query: 435 DIVSWNIVIAAC 446
D V W ++ AC
Sbjct: 555 DAVLWASLLGAC 566
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 166/419 (39%), Gaps = 49/419 (11%)
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
+ F+ + L+ YA+ +L A F + ++N S+NAL+ A L +
Sbjct: 49 ETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIP 108
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL-- 393
P++ +++ V+ ++LA L ++VL + + A S S+
Sbjct: 109 ---DPDQCSYNAVV-AALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASR 164
Query: 394 ------AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
A VT + V + +Y + + E K+ + +IVSWN +I
Sbjct: 165 TGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYE 224
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
NG E L LF M PD T S++SAC+ L G +H + K++ D
Sbjct: 225 QNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDM 284
Query: 508 FVCNMLIDMYGKCG-------------------------------SIGSSVKIFNEMTDR 536
+ N L+DMY KCG ++G + +F +M ++
Sbjct: 285 VLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEK 344
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
NV+ W LI+ N + AL F ++ P VL AC + ++ G +
Sbjct: 345 NVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAH 404
Query: 597 ERMNRS---YGVEPEMDHY--HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + + PE D + + +VD+ ++ G + + K+ M N + W + G
Sbjct: 405 VHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDN-VSWNAMIVG 462
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFRE 563
+ +TF+ N L+ Y + GS+ + ++F+ M RN ++ AL+SA G A AL F
Sbjct: 47 AGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGA 106
Query: 564 MEFLGFKPDRVALIAVLTA-CRHG 586
+ PD+ + AV+ A +HG
Sbjct: 107 IP----DPDQCSYNAVVAALAQHG 126
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 170/507 (33%), Positives = 274/507 (54%), Gaps = 15/507 (2%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCA---GIWSAEKMFKDVEIRDVVSWNTIIGA 216
G QIH I NG +++ + L++ + G+ + +F ++ ++ WNT+I
Sbjct: 25 GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRG 84
Query: 217 LAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+ S+N +A+ LY+ M + I PN TF +++NSCA L + G +H+ +IK+ E
Sbjct: 85 YSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFES 144
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELL 334
D+FV +AL+ Y+ NL A F E +++VS+N +I GYA + P S L E+
Sbjct: 145 DLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQ 204
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTS------YAKSGL 388
G P+EFTF + + I Y+N + +++ YAK GL
Sbjct: 205 NSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGL 264
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
I+ A + + ++ + + Y R G+ N KL + + D++SW +I+ +
Sbjct: 265 INIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQ 324
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
G E LELFK M A I PD T V++LSAC++L LG L+ + + + +T
Sbjct: 325 AGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTI 384
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT---WTALISALGLNGFAQRALEKFREME 565
+ ++DMY KCGSI S+++IF + +N+ T + ++I+ L +G + A+ FRE+
Sbjct: 385 LTAAVMDMYAKCGSIDSALEIFRRV-GKNMKTGFVFNSMIAGLAQHGLGETAITVFRELI 443
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G KPD V + VL AC H GL+ EG +LFE M +YG++P+M+HY C+VDLL RYG L
Sbjct: 444 STGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCL 503
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQ 652
+EA ++ MPF N++IWR L C+
Sbjct: 504 EEAYDLVQKMPFEANSVIWRALLSACR 530
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 142/568 (25%), Positives = 251/568 (44%), Gaps = 83/568 (14%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGL----FCADAFVGTALLGLYGRHGCLDEVVSVFEDMP 102
L SC S +G Q+ A + NGL F + + L G LD +F +
Sbjct: 16 LESCKSFK--QGLQIHAQTIVNGLHHQIFSISRLI--SFFSLLGSKDGLDHSRLLFSQID 71
Query: 103 RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGE 161
+L WN+++ + + + + L+ ++ +A + +F +++ + LE G
Sbjct: 72 CPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGH 131
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
++H +IK+GF+ +L V N+L+++Y + A +F + +RD+VS+NT+I AE
Sbjct: 132 EVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVN 191
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN--ALECDVFV 279
AL L+ M + P++ TFV + + C+ L +GK IHA+V KN +++ ++ +
Sbjct: 192 QPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILL 251
Query: 280 GSALVDFYAK--------------------------------CDNLEGAHLCFSEISNKN 307
SA+VD YAK C + A F+ + ++
Sbjct: 252 KSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERD 311
Query: 308 IVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSL---AFQL-LQLHC 362
++SW A+I GY+ ++ L E+ LG +P+E T VL + AF L +L+
Sbjct: 312 VISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYH 371
Query: 363 LIIRMGYENYEYVL-GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
I G N +L ++M YAK G I AL I+ R G+
Sbjct: 372 QYIENGVFNQNTILTAAVMDMYAKCGSIDSALE-------------------IFRRVGKN 412
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
+T + +N +IA A +G + + +F+ + + + PD TFV +L AC
Sbjct: 413 MKTGFV-----------FNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCAC 461
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVIT 540
+ G L + I ++D+ G+ G + + + +M + N +
Sbjct: 462 GHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVI 521
Query: 541 WTALISALGLNG---FAQRALEKFREME 565
W AL+SA +G + A +K EME
Sbjct: 522 WRALLSACRTHGNVKIGEIAGQKLLEME 549
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 116/230 (50%), Gaps = 3/230 (1%)
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP-DNYTFVSLLSACSKLC 485
L SQ++ P++ WN +I + + + +E + L+ M A I P +N+TF LL++C++L
Sbjct: 66 LFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLS 125
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
+L G +H I K SD FV N LI +Y G++ + +F+E R+++++ +I
Sbjct: 126 SLEPGHEVHSHIIKHGF-ESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMI 184
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSY-G 604
+ AL F EM+ G PD +A+ + C G ++ ++ ++
Sbjct: 185 KGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRS 244
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC 654
++ + +VD+ + G + AE++ +TM +A W + + G RC
Sbjct: 245 IDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARC 294
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 134/288 (46%), Gaps = 38/288 (13%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLN-PVEGAQL 61
R++VS+N++I Y+ E AL +F M N G P +FTF L S C LN P G Q+
Sbjct: 175 RDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQI 234
Query: 62 QASVLKN---------------------GLF------------CADAFVGTALLGLYGRH 88
A V KN GL A ++++ Y R
Sbjct: 235 HAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARC 294
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI 148
G ++ +F M + +++W +++S + + G + + LF E+ + E + V V+
Sbjct: 295 GEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVL 354
Query: 149 HGLSNEQDLEFGEQIHGLVIKNG-FDYELLVANSLVNMYFQCAGIWSAEKMFKDV--EIR 205
+ + G++++ I+NG F+ ++ ++++MY +C I SA ++F+ V ++
Sbjct: 355 SACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMK 414
Query: 206 DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
+N++I LA+ A+ ++ + + P++ TFV V+ +C
Sbjct: 415 TGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACG 462
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 92/167 (55%), Gaps = 4/167 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M +R+V+S+ ++IS YS+ G +AL +F M G +P + T +LS C L + G
Sbjct: 307 MHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLG 366
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR--KSLVTWNSIVSIF 116
+L ++NG+F + + A++ +Y + G +D + +F + + K+ +NS+++
Sbjct: 367 KRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGL 426
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI 163
+HG E + +F EL+ + + E +FVGV+ + +E G+++
Sbjct: 427 AQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKL 473
>gi|255568940|ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535253|gb|EEF36930.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 186/690 (26%), Positives = 340/690 (49%), Gaps = 79/690 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
MP R+++++N ++S L +F M+ P + T +L V
Sbjct: 148 MPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVASVLRAYGSGNVAFYY 207
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ AS++ GL + L+ LY ++G + VF+++ K V+W +++S +
Sbjct: 208 VEQIHASIISRGL-GTSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYS 266
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++GF E+ + LFCE+ S ++ T F V+ + + + GEQ+H LV K GF E
Sbjct: 267 QNGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETY 326
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+LV +Y + SA+++F ++ +D VS+N++I L++ +ALEL+ +M +D
Sbjct: 327 VCNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDH 386
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P+ T ++++CA +++ G+ +H+ IK + D+ + +L+D Y KC ++ AH
Sbjct: 387 LKPDCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAH 446
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F+ +N+V WN +++ Y + + F + +Q+ G PN+FT+ +LR+ +F
Sbjct: 447 KFFATTQTENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFG 506
Query: 357 LL----QLHCLIIRMGYENYEYV----------LG---------------------SLMT 381
L Q+H I+ G+E YV LG +L+
Sbjct: 507 ALDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIA 566
Query: 382 SYAKSGLISDAL-------------------------AFVTALNIPRAVVPANIIAG--- 413
Y + L ++AL A + AL+ + + + I+G
Sbjct: 567 GYTQHDLFTEALNLFDEMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSE 626
Query: 414 ----------IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+Y R G+ E +++ D +SWN +++ A +G +E L++F M
Sbjct: 627 DLSIGNALVSLYARCGRIQEANLAFEKIDAKDSISWNALMSGFAQSGYCEEALKIFAQMT 686
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
A I +TF S +SA + + N+ G +H +I KT S+ V N LI +Y KCG I
Sbjct: 687 RANIKASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGF-DSEIEVSNALITLYAKCGCI 745
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ + F E+ ++N I+W A+I+ +G A+ F++M+ +G KP+ V + V++AC
Sbjct: 746 DGAKREFFEIPEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQVGAKPNHVTFVGVISAC 805
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYH 613
H GLV EG+ FE M++ +G+ ++ +H
Sbjct: 806 SHVGLVNEGLAYFESMSKEHGLIIGLEDFH 835
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 163/628 (25%), Positives = 295/628 (46%), Gaps = 48/628 (7%)
Query: 29 FLYMIN-RGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLY 85
FL++++ RG T+ LL +S + ++ +L + +LK G F ++ + L+ Y
Sbjct: 74 FLHVVDERGSRAKSQTYLWLLDFCLNSASFLDCKKLHSKILKIG-FDKESVLCDKLIEFY 132
Query: 86 GRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFV 145
G L+ VV VF+DMP +SL+TWN ++S + + LF ++V V E +
Sbjct: 133 FAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVA 192
Query: 146 GVIHGL-SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
V+ S + EQIH +I G + N L+++Y + I SA K+F ++ +
Sbjct: 193 SVLRAYGSGNVAFYYVEQIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDELCM 252
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+D VSW +I + +++ +A+ L+ M + + P F V+++CA ++ +G+ +
Sbjct: 253 KDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFDIGEQL 312
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
HA V K + +V +ALV Y++ N A FS+I K+ VS+N+LI G + +
Sbjct: 313 HALVFKCGFFLETYVCNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGLSQQGCS 372
Query: 325 TSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSL 379
L + +QL + +P+ T + +L + + + L QLH I+ G + GSL
Sbjct: 373 DRALELFKKMQLDHLKPDCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSL 432
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+ Y K I+ A F + + ++V W
Sbjct: 433 LDLYVKCSDITTAHKF--------------------------------FATTQTENVVLW 460
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
N+++ A + + +F+ M+ + P+ +T+ S+L C+ L LG +H K
Sbjct: 461 NVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIK 520
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
T + +VC++LIDMY K G + + I + + +V++WTALI+ + AL
Sbjct: 521 TG-FEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALN 579
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
F EM G + D + + ++AC + +G ++ + S G ++ + +V L
Sbjct: 580 LFDEMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYIS-GYSEDLSIGNALVSLY 638
Query: 620 VRYGHLKEA----EKIITTMPFPPNALI 643
R G ++EA EKI NAL+
Sbjct: 639 ARCGRIQEANLAFEKIDAKDSISWNALM 666
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 112/243 (46%), Gaps = 9/243 (3%)
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y G N VK+ + +++WN V++ N VL LF M + P+ T
Sbjct: 132 YFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTV 191
Query: 475 VSLLSACSKLCNLALG--SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
S+L A N+A +H I + + + + CN LID+Y K G I S+ K+F+E
Sbjct: 192 ASVLRAYGS-GNVAFYYVEQIHASII-SRGLGTSSIACNPLIDLYAKNGFIRSARKVFDE 249
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ ++ ++W A+IS+ NGF + A+ F EM G P +VL+AC L G
Sbjct: 250 LCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFDIG 309
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP----NALIWRTFL 648
+L + + G E + +V L R G+ A+++ + + N+LI
Sbjct: 310 EQLHALVFKC-GFFLETYVCNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGLSQ 368
Query: 649 EGC 651
+GC
Sbjct: 369 QGC 371
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 187/648 (28%), Positives = 318/648 (49%), Gaps = 32/648 (4%)
Query: 6 VVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASV 65
V N+ I + G + +A+++ E + L C L +E + S+
Sbjct: 24 TVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELNTYC-SVLQLCAELKSLEDGKRVHSI 82
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
+ + D +G L+ +Y G L + +F+ + + WN ++S + K G +
Sbjct: 83 ISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRES 142
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
+ LF ++ + +F V+ G + + +++HG V+K GF V NSL+
Sbjct: 143 VGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAA 202
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
YF+C + SA +F ++ RDVVSWN++I + LE +++M V + T
Sbjct: 203 YFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATL 262
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
V V+ +CA + N LG+++HA +K V + L+D Y+KC NL GA+ F ++
Sbjct: 263 VNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGE 322
Query: 306 KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
IVSW ++I + + +I L E+ G RP+ + + V+ + L
Sbjct: 323 TTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLD----- 377
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
G E + ++ + M S N+P +N + +Y + G E
Sbjct: 378 --KGREVHNHIKKNNMGS-----------------NLP----VSNALMNMYAKCGSMEEA 414
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+ SQL +IVSWN +I + N E L+LF M+ ++ PD+ T +L AC+ L
Sbjct: 415 NLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQK-QLKPDDVTMACVLPACAGL 473
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
L G +HG I + S D V L+DMY KCG + + ++F+ + +++I WT +
Sbjct: 474 AALEKGREIHGHILRKGYFS-DLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVM 532
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I+ G++GF + A+ F +M G +P+ + ++L AC H GL++EG +LF+ M
Sbjct: 533 IAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECN 592
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+EP+++HY C+VDLL+R G+L A K I TMP P+A IW L GC+
Sbjct: 593 IEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCR 640
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 224/483 (46%), Gaps = 35/483 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSL-NPVEG 58
+ DR+VVS+NS+IS + G+ + L F+ M+N G + T L++C ++ N G
Sbjct: 219 LSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLG 278
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L A +K G F LL +Y + G L+ VF M ++V+W SI++ +
Sbjct: 279 RALHAYGVKAG-FSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVR 337
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + LF E+ + + V+H + L+ G ++H + KN L V
Sbjct: 338 EGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPV 397
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N+L+NMY +C + A +F + ++++VSWNT+IG +++ +AL+L+L M +
Sbjct: 398 SNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQLK 457
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T V+ +CAGL G+ IH +++ D+ V ALVD Y KC L A
Sbjct: 458 -PDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQ 516
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F I K+++ W +I GY E +++ G P E +F+ +L +
Sbjct: 517 LFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYAC----- 571
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
H +++ G++ ++ + + NI + + + R
Sbjct: 572 --THSGLLKEGWKLFD--------------------SMKSECNIEPKLEHYACMVDLLIR 609
Query: 418 TGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+G + K + + +PD W +++ C + D + ++ +++ + P+N +
Sbjct: 610 SGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHI--FELEPENTRYYV 667
Query: 477 LLS 479
LL+
Sbjct: 668 LLA 670
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 173/584 (29%), Positives = 298/584 (51%), Gaps = 40/584 (6%)
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
+ WN+++ K G ++ + + +V V L S+F +IH D++ G ++HG
Sbjct: 99 IIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGR 158
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
++K GF + N+L+ +Y +C + ++F+ + RDV+SWNT+I + +A
Sbjct: 159 ILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREA 218
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL------------- 273
L+L+ M V V P++ T V ++++CA L++ +GK +H ++ N L
Sbjct: 219 LDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDM 278
Query: 274 --------------------ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
E DV + + LV Y K + ++ A F +++ +++VSW
Sbjct: 279 YSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTT 338
Query: 314 LILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMG 368
++ GY L + ++ P+E VL + + + L H I+ G
Sbjct: 339 MMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYG 398
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
++ +L+ YAK G + +AL L A +++ G + R+G ++
Sbjct: 399 MLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDG-FCRSGGVDKARDFF 457
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
+++ DIVSWN ++ A + + E E+F M+++ + PD T +SLLS+C+K+ L
Sbjct: 458 NKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALN 517
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G ++ I+K EI D + LIDMYGKCG + + +IF ++ ++NV WTA+++A
Sbjct: 518 HGIWVNVYIEKNEI-GIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAY 576
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
+ G A A++ + EME G KPD V IA+L AC HGGLV EG + F ++ Y + P
Sbjct: 577 AMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPT 636
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ HY C+VDLL R GHL+E K I MP P+ IW + + C+
Sbjct: 637 IHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACR 680
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 135/601 (22%), Positives = 281/601 (46%), Gaps = 51/601 (8%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRG--FEPTQFTFGGLLSCDSLNPVEGAQLQASVL 66
+N+++ + G ++ L + +M+ +G + + F F C + + G+++ +L
Sbjct: 101 WNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRIL 160
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K G F + + L+GLY + G L EV +FE M + +++WN+++S + G + +
Sbjct: 161 KCG-FGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREAL 219
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
LF E++ S V E + V ++ + +DLE G+++H ++ N + N LV+MY
Sbjct: 220 DLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMY 279
Query: 187 FQCAG-------------------IWS--------------AEKMFKDVEIRDVVSWNTI 213
+C +W+ A ++F + R +VSW T+
Sbjct: 280 SKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTM 339
Query: 214 IGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
+ + + ++LEL+ +M + V P++ V V+++C L++ LG+S+HA ++ +
Sbjct: 340 MSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGM 399
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK---SSPTSIFLL 330
D F+G+AL+D YAKC L+ A F ++ K+ SWN+++ G+ F
Sbjct: 400 LVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNK 459
Query: 331 I---ELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
I +++ N + ++ L + ++ C + + + L SL++S AK G
Sbjct: 460 IPEKDIVSWNTMVNAY-----VKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVG 514
Query: 388 LISDAL---AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
++ + ++ I + + +Y + G ++ +Q+ ++ W ++A
Sbjct: 515 ALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMA 574
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
A A G E ++L+ M + PD+ TF++LL+ACS + G ++ I
Sbjct: 575 AYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNII 634
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFRE 563
++D+ G+ G + +VK M + +V W++L+ A + + A + F++
Sbjct: 635 PTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQ 694
Query: 564 M 564
+
Sbjct: 695 L 695
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 237/550 (43%), Gaps = 104/550 (18%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M R+V+S+N++IS Y G +AL +F M+ G P + T L+S C L +E G
Sbjct: 194 MTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMG 253
Query: 59 AQLQASVLKNGLFC--------------------------------ADAFVGTALLGLYG 86
+L ++ N L+ D + T L+ Y
Sbjct: 254 KRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYV 313
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
+ +D+ +F+ M +SLV+W +++S + + G+ + + LF ++ V E + V
Sbjct: 314 KSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVT 373
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC----------------- 189
V+ + +D + G +H ++ G + + N+L+++Y +C
Sbjct: 374 VLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKS 433
Query: 190 --------------AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
G+ A F + +D+VSWNT++ A + + F ++ E++ +M
Sbjct: 434 AASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQS 493
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V P++TT + +++SCA + G ++ + KN + D +G+AL+D Y KC +E
Sbjct: 494 SNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEM 553
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A+ F++I KN+ W A++ YA + +I L +E+ + G +P+ TF
Sbjct: 554 AYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFI-------- 605
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NI 410
+L+ + + GL+ + + L ++P
Sbjct: 606 -----------------------ALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGC 642
Query: 411 IAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ + R G ETVK + ++ PD+ W+ ++ AC + + + + FK + I P
Sbjct: 643 MVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQL--IEIDP 700
Query: 470 DNYTFVSLLS 479
N LLS
Sbjct: 701 TNNGAHVLLS 710
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 204/467 (43%), Gaps = 74/467 (15%)
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
S + K L + S ++ P+ + ++ SC+ ++ IHA +I L D +
Sbjct: 15 SPSIHKPPTLNPKTSHSVLRPHW--IIDLLKSCSNIREF---SPIHAHLITANLIHDPEI 69
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR 339
S ++ F +NL+ AH S + WN L+ + P E+L+ Y
Sbjct: 70 TSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQ------EVLECYY- 122
Query: 340 PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
H++ + + H +I +N++ LG S+ +
Sbjct: 123 -------HMVTQGVLLDISTFH-FLIHACCKNFDVKLG------------SEVHGRILKC 162
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
R N + G+Y++ G+ E +L ++ D++SWN +I+ G Y+E L+LF
Sbjct: 163 GFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLF 222
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
M + + PD T VSL+S C+KL +L +G LH I ++ + + N L+DMY K
Sbjct: 223 DEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLL-NCLVDMYSK 281
Query: 520 CG---------------------------------SIGSSVKIFNEMTDRNVITWTALIS 546
CG I + ++F++M +R++++WT ++S
Sbjct: 282 CGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMS 341
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR---SY 603
G+ +LE F++M F PD VAL+ VL+AC H E +L ++ +Y
Sbjct: 342 GYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVH----LEDFDLGRSVHAFIVTY 397
Query: 604 GVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G+ + + ++DL + G L EA + +P +A W + L+G
Sbjct: 398 GMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPC-KSAASWNSMLDG 443
>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 193/665 (29%), Positives = 328/665 (49%), Gaps = 46/665 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS---LNPVEG 58
P + +NS++ + R L M G P++FT + S + PV G
Sbjct: 68 PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPV-G 126
Query: 59 AQLQASVLKNGLFCADAFVGTA--LLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
A + A ++ GL D V A L+ +Y R G + + V +F++MP + +V W +++S
Sbjct: 127 AAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGC 186
Query: 117 GKHGFVEDCMFLFCELVRSE----VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+G + + +VRS + + +L G +HG +K G
Sbjct: 187 VCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGV 246
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ V +SL +MY +C A +F ++ +D+VSW ++IGA + + KA+EL+L
Sbjct: 247 GHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLG 306
Query: 233 MSVDIVFPNQTTFVYVINSC--AGLQNSIL---GKSIHAKVIKNALECDVFVGSALVDFY 287
M + P++ V+ SC AGL N GK+ HA +++ V +G+AL+ Y
Sbjct: 307 MEESGLQPDE-----VVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMY 361
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSH 347
AKC ++ A F + ++ SW+++++ Y L +Q + +EF +
Sbjct: 362 AKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDK-DEFEYDT 420
Query: 348 VLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
S+ +L L R+G + Y + L +
Sbjct: 421 NSLISIISSCSRLGRL--RLGQSAHCYSIKHLAGENSSV--------------------- 457
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
AN + +Y R G ++ K+ ++ D+V+W+ +I++ +H G K+ L L+ M +
Sbjct: 458 ANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGV 517
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P++ T VS++S+C+ L L G +H +K + D +C L+DMY KCG +G +
Sbjct: 518 KPNSATLVSVISSCANLAALEHGELIHSHVKDVGL-ECDLSICTALVDMYMKCGQLGIAR 576
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
K+F+ M +R+V+TW +IS G++G A +AL+ F ME KP+ + +A+L+AC H G
Sbjct: 577 KMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAG 636
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
LV +G ELF RM Y +EP + HY C+VDLL + GHL+EAE +++ MP P+ IW T
Sbjct: 637 LVDKGRELFTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTL 695
Query: 648 LEGCQ 652
L C+
Sbjct: 696 LGACK 700
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 142/566 (25%), Positives = 257/566 (45%), Gaps = 57/566 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI----NRGFEPTQFTF-GGLLSCDSLNP 55
MP+R+VV++ ++IS G + L + M+ + G P T GL +C L
Sbjct: 171 MPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGE 230
Query: 56 VE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+ G L +K G+ + V ++L +Y + ++ +F ++P K LV+W S++
Sbjct: 231 LSVGTCLHGFGVKAGVGHCPSVV-SSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIG 289
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + G E + LF + S + E ++ GL N+ + G+ H +++ F
Sbjct: 290 AYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGD 349
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+L+ N+L++MY +C + A +F+ + RD SW++++ A ++ K LELY M
Sbjct: 350 SVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQ 409
Query: 235 VDIVFPNQTTFVYVINSCAG-------LQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
F ++ F Y NS L LG+S H IK+ + V +AL+ Y
Sbjct: 410 ----FRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMY 465
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFS 346
+C N + A F + K++V+W+ALI Y+ S ++ L ++L G +PN T
Sbjct: 466 GRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLV 525
Query: 347 HVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
V+ S L+ G L+ S+ K + L+ TAL
Sbjct: 526 SVISSCANLAALE----------------HGELIHSHVKDVGLECDLSICTAL------- 562
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
+Y + GQ K+ + D+V+WN++I+ +G+ + L+LF M
Sbjct: 563 -----VDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGN 617
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT----FVCNMLIDMYGKCGS 522
+ P++ TF+++LSAC C+ L L + E S + + C ++D+ GK G
Sbjct: 618 VKPNSLTFLAILSAC---CHAGLVDKGRELFTRMEEYSLEPNLKHYAC--MVDLLGKSGH 672
Query: 523 IGSSVKIFNEMT-DRNVITWTALISA 547
+ + + + M + + W L+ A
Sbjct: 673 LQEAEDVVSAMPIEPDGGIWGTLLGA 698
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 226/490 (46%), Gaps = 46/490 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
+P++++VS+ S+I AY R G+ E A+ +FL M G +P + LL+ + G
Sbjct: 276 LPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGG 335
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
A++++ F +G AL+ +Y + +D +VF + ++ +W+S+V + K
Sbjct: 336 KTFHAAIVRRN-FGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCK 394
Query: 119 HGFVEDCMFLFCELV---RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
G C+ L+ E+ + E +S + +I S L G+ H IK+
Sbjct: 395 AGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGEN 454
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
VAN+L++MY +C A K+F V+ +DVV+W+ +I + + + AL LY +M
Sbjct: 455 SSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLT 514
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ V PN T V VI+SCA L G+ IH+ V LECD+ + +ALVD Y KC L
Sbjct: 515 EGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGI 574
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLA 354
A F + +++V+WN +I GY L +++ G +PN TF +L +
Sbjct: 575 ARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSAC-- 632
Query: 355 FQLLQLHCLIIRMGYENY----EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
H ++ G E + EY L + YA
Sbjct: 633 -----CHAGLVDKGRELFTRMEEYSLEPNLKHYA-------------------------C 662
Query: 411 IAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ + ++G E ++S + PD W ++ AC + +++ L + K A+ P
Sbjct: 663 MVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASD--P 720
Query: 470 DNYTFVSLLS 479
+N + L+S
Sbjct: 721 ENDGYYILMS 730
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 118/272 (43%), Gaps = 16/272 (5%)
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
ALA + L+ PR A +++ Y+ G + PD WN ++ + D
Sbjct: 30 ALAVTSGLS-PRPDFAAKLVSA-YSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD--TFV 509
+ L + MRA+ P +T + SA ++L L +G+++H + ++ D V
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF----REME 565
+ L+ MY +CGS+ +V++F+EM +R+V+ WTA+IS NG L R
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV-DLLVRYGH 624
G +P+ + + L AC G + G L +GV+ + H VV L Y
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCL-----HGFGVKAGVGHCPSVVSSLFSMYTK 262
Query: 625 LKEAEKIITTMP-FPPNALIWRTFLEGCQRCR 655
E P P L+ T L G CR
Sbjct: 263 CDSTEDARILFPELPEKDLVSWTSLIGAY-CR 293
>gi|302791495|ref|XP_002977514.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
gi|300154884|gb|EFJ21518.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
Length = 673
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 161/499 (32%), Positives = 269/499 (53%), Gaps = 43/499 (8%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
+I V+ GFD ++ VA +L++ +C + A + F + ++VVSWN++I AL E
Sbjct: 34 EIQFRVVATGFDADVTVATALISALARCGDLEGAREAFDRIPAKNVVSWNSMIAALNEHG 93
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
+F +ALE+Y RM + V P+ ++++ + SC+GL++ GKSIH +V + + VFVG+
Sbjct: 94 HFARALEIYRRMEPEGVKPSDISYIHALCSCSGLRDLEQGKSIHDRVATDGFDTQVFVGN 153
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL--QLGYR 339
ALV+ Y+KC L+ A F I +K++VSWN++I ++ + +
Sbjct: 154 ALVNMYSKCRRLDLAREAFERIDSKDVVSWNSMIAAHSQLGGSDEALETYRRMIGEERLE 213
Query: 340 PNEFTFSHVLRSSLAF------QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
P + T H L ++L+ +LLQ IR+G E V +L+++ K G + A
Sbjct: 214 PTKITLVHALGAALSLRSAGDTKLLQEDA--IRLGLEGDLLVGSALVSALGKCGCLDQAR 271
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
A +++R +ER ++VSW+ +IAA A +G +
Sbjct: 272 A-------------------VFDR-------------MERRNVVSWSGLIAALAEHGRGR 299
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
+ +ELF M I P+ T +S+L AC+ +A G H + ++T V N L
Sbjct: 300 DAIELFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGF-EAETNVANAL 358
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
++MYGKCG +GS+ +F+ MT RNV++WTA+++ +G + A F+ M G +P+
Sbjct: 359 VNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNV 418
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
+ ++VL C H G+V +G+E F M +G+ P +HY CV+DLL R G L+EAE+++
Sbjct: 419 ITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLR 478
Query: 634 TMPFPPNALIWRTFLEGCQ 652
TMP P+ W + L C+
Sbjct: 479 TMPVEPDKAAWNSLLGACK 497
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 146/532 (27%), Positives = 248/532 (46%), Gaps = 41/532 (7%)
Query: 36 GFEPTQFTFGGLLSCDSLNPVEG-----AQLQASVLKNGLFCADAFVGTALLGLYGRHGC 90
G P F LL + +P + A++Q V+ G F AD V TAL+ R G
Sbjct: 5 GCRPNAVIFTRLLEACARSPEKSDRSRLAEIQFRVVATG-FDADVTVATALISALARCGD 63
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG 150
L+ F+ +P K++V+WNS+++ +HG + ++ + V ++ S++ +
Sbjct: 64 LEGAREAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHALCS 123
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
S +DLE G+ IH V +GFD ++ V N+LVNMY +C + A + F+ ++ +DVVSW
Sbjct: 124 CSGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSW 183
Query: 211 NTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
N++I A ++ +ALE Y RM + + P + T V+ + + L+++ K + I
Sbjct: 184 NSMIAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHALGAALSLRSAGDTKLLQEDAI 243
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFL 329
+ LE D+ VGSALV KC L+ A F + +N+VSW+ LI A
Sbjct: 244 RLGLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAIE 303
Query: 330 LIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
L + L G +PNE T VL + + I G + V G
Sbjct: 304 LFHRMDLDGIQPNEVTLLSVLEACASTG-------AIAEGRRTHARVSG----------- 345
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
F N+ AN + +Y + G + + ++VSW ++A AH
Sbjct: 346 ----CGFEAETNV------ANALVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAH 395
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG-SSLHGLIKKTEIIS-SD 506
+G +E +FK M I P+ TFVS+L CS ++ G H ++ I+ ++
Sbjct: 396 HGHTEEARRVFKAMALEGIQPNVITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTE 455
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISALGLNGFAQRA 557
+ C +ID+ G+ G + + ++ M + + W +L+ A ++ RA
Sbjct: 456 HYGC--VIDLLGRAGWLEEAEELLRTMPVEPDKAAWNSLLGACKVHSHTDRA 505
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 220/472 (46%), Gaps = 48/472 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
+P +NVVS+NS+I+A + G+ AL ++ M G +P+ ++ L SC L +E G
Sbjct: 74 IPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHALCSCSGLRDLEQG 133
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V +G F FVG AL+ +Y + LD FE + K +V+WNS+++ +
Sbjct: 134 KSIHDRVATDG-FDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSWNSMIAAHSQ 192
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL---VIKNGFDYE 175
G ++ + + ++ E E + + ++H L L L I+ G + +
Sbjct: 193 LGGSDEALETYRRMIGEE--RLEPTKITLVHALGAALSLRSAGDTKLLQEDAIRLGLEGD 250
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
LLV ++LV+ +C + A +F +E R+VVSW+ +I ALAE A+EL+ RM +
Sbjct: 251 LLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAIELFHRMDL 310
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D + PN+ T + V+ +CA G+ HA+V E + V +ALV+ Y KC +L
Sbjct: 311 DGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVANALVNMYGKCGHLGS 370
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
A F ++ +N+VSW A++ GYA + + + L G +PN TF VL +
Sbjct: 371 ARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITFVSVLFNC-- 428
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN----I 410
H ++ G E + ++G +VP
Sbjct: 429 -----SHAGVVSDGLEQFHIMVGDF------------------------GIVPVTEHYGC 459
Query: 411 IAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC---AHNGDYKEVLEL 458
+ + R G E +LL + PD +WN ++ AC +H K + +L
Sbjct: 460 VIDLLGRAGWLEEAEELLRTMPVEPDKAAWNSLLGACKVHSHTDRAKRIAKL 511
>gi|255583926|ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527557|gb|EEF29678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 679
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 193/639 (30%), Positives = 325/639 (50%), Gaps = 42/639 (6%)
Query: 17 SRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC----DSLNPVEGAQLQASVLKNGLFC 72
+R +A+ ++ MI G P + F +L LN G Q+ A V+K G
Sbjct: 53 TRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNL--GKQIHAHVVKYGYES 110
Query: 73 ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL 132
+ + +L+ YG+ LD+V VF+ + + LV+WNS++S F + E + F +
Sbjct: 111 SSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFM 170
Query: 133 VRSEVALTESSFVGVIHGLSN---EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
+ ++ + + V + SN + L G+QIHG +NG + N+L+ MY
Sbjct: 171 LAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGH-WSTFTNNALMTMYANL 229
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A+ +FK E R+++SWNT+I + +++E F +AL M ++ V P+ T V+
Sbjct: 230 GRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVL 289
Query: 250 NSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+C+ L+ GK IHA +++ L + FVGSALVD Y C + F I +
Sbjct: 290 PACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGILERKT 349
Query: 309 VSWNALILGYA-SKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA----FQLLQLHC 362
WNA+I GYA ++ ++ L IE++ + G PN T + ++ +S F +H
Sbjct: 350 GLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKESIHG 409
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
+I+ E YV +LM Y++ + + ++ + R +V N + Y +G YN
Sbjct: 410 YVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEV-RDIVSWNTMITGYVISGCYN 468
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
+ + +L +++ + H+GD + A P++ T +++L C+
Sbjct: 469 DALLMLHEMQHAN-------EGINKHDGD-----------KQACFKPNSITLMTVLPGCA 510
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
L LA G +H + ++S+ V + L+DMY KCG + S ++F++M +NVITW
Sbjct: 511 SLAALAKGKEIHAYAVRNA-LASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWN 569
Query: 543 ALISALGLNGFAQRALEKFREMEFLG-----FKPDRVALIAVLTACRHGGLVREGMELFE 597
++ A G++G + ALE F++M G KP V +IA+L AC H G+V EG++LF
Sbjct: 570 VIVMAYGMHGNGEEALELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKLFH 629
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
RM +G+EP DHY CV DLL R G +++A I TMP
Sbjct: 630 RMKDDHGIEPGPDHYACVADLLGRAGKVEQAYDFINTMP 668
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 149/547 (27%), Positives = 264/547 (48%), Gaps = 36/547 (6%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEG--- 58
+R++VS+NS+ISA+ R E AL F +M+ EP+ FT +++C +L EG
Sbjct: 141 ERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRL 200
Query: 59 -AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ +NG + F AL+ +Y G LD+ +F+ ++L++WN+++S F
Sbjct: 201 GKQIHGYCFRNGHW--STFTNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFS 258
Query: 118 KHG-FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE- 175
++ FVE M L +V V + V+ S + L G++IH +++G E
Sbjct: 259 QNERFVEALMSLRY-MVLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIEN 317
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-S 234
V ++LV+MY C + S ++F + R WN +I A++E+ KAL L++ M +
Sbjct: 318 SFVGSALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVA 377
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
V + PN TT ++ + A ++ +SIH VIK LE D +V +AL+D Y++ +E
Sbjct: 378 VAGLCPNTTTMASIVPASARCESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKME 437
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
+ F + ++IVSWN +I GY L++ +Q NE H
Sbjct: 438 ISKTIFDSMEVRDIVSWNTMITGYVISGCYNDALLMLHEMQ---HANEGINKHDGDKQAC 494
Query: 355 FQLLQLHCLIIRMGYENYEYVL-GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
F+ + + + G + + G + +YA + +ALA V + +
Sbjct: 495 FKPNSITLMTVLPGCASLAALAKGKEIHAYA----VRNALA--------SEVTVGSALVD 542
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA-----ARIY 468
+Y + G N + ++ Q+ ++++WN+++ A +G+ +E LELFK M A +
Sbjct: 543 MYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEALELFKDMVAKGDNVGEVK 602
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS--SDTFVCNMLIDMYGKCGSIGSS 526
P T +++L+ACS + G L +K I D + C + D+ G+ G + +
Sbjct: 603 PTEVTMIAILAACSHSGMVDEGLKLFHRMKDDHGIEPGPDHYAC--VADLLGRAGKVEQA 660
Query: 527 VKIFNEM 533
N M
Sbjct: 661 YDFINTM 667
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 138/563 (24%), Positives = 250/563 (44%), Gaps = 56/563 (9%)
Query: 104 KSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI 163
+S +W + + + + + +++ S V+ +F V+ ++ QDL G+QI
Sbjct: 40 RSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQI 99
Query: 164 HGLVIKNGFDYE-LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
H V+K G++ + +ANSLVN Y +C+ + K+F + RD+VSWN++I A ++
Sbjct: 100 HAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQE 159
Query: 223 FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS---ILGKSIHAKVIKNALECDVFV 279
+ ALE + M + + P+ T V + +C+ L+ LGK IH +N F
Sbjct: 160 WELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNG-HWSTFT 218
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GY 338
+AL+ YA L+ A F ++N++SWN +I ++ + + + L G
Sbjct: 219 NNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGV 278
Query: 339 RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS---LMTSYAKSGLISDALAF 395
+P+ T + VL + ++L G E + Y L S + S+ S L+
Sbjct: 279 KPDGVTLASVLPACSYLEMLG-------TGKEIHAYALRSGDLIENSFVGSALVD----- 326
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
+Y GQ ++ + WN +IA A N ++
Sbjct: 327 ------------------MYCNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKA 368
Query: 456 LELFKYMRA-ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
L LF M A A + P+ T S++ A ++ + S+HG + K + + D +V N L+
Sbjct: 369 LMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKESIHGYVIKRD-LERDRYVQNALM 427
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG------ 568
DMY + + S IF+ M R++++W +I+ ++G AL EM+
Sbjct: 428 DMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVISGCYNDALLMLHEMQHANEGINKH 487
Query: 569 -------FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR 621
FKP+ + L+ VL C + +G E+ R+ + E+ +VD+ +
Sbjct: 488 DGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAVRN-ALASEVTVGSALVDMYAK 546
Query: 622 YGHLKEAEKIITTMPFPPNALIW 644
G L + ++ MP N + W
Sbjct: 547 CGCLNLSRRVFDQMPI-KNVITW 568
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 30/209 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM------INRG-------FEPTQFTFGGL 47
M R++VS+N++I+ Y G DAL M M IN+ F+P T +
Sbjct: 446 MEVRDIVSWNTMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTV 505
Query: 48 L-SCDSLNPV-EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS 105
L C SL + +G ++ A ++N L ++ VG+AL+ +Y + GCL+ VF+ MP K+
Sbjct: 506 LPGCASLAALAKGKEIHAYAVRNAL-ASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKN 564
Query: 106 LVTWNSIVSIFGKHGFVEDCMFLFCELVRS-----EVALTESSFVGVIHGLSNEQDLEFG 160
++TWN IV +G HG E+ + LF ++V EV TE + + ++ S+ ++ G
Sbjct: 565 VITWNVIVMAYGMHGNGEEALELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEG 624
Query: 161 EQI-------HGLVIKNGFDYELLVANSL 182
++ HG I+ G D+ VA+ L
Sbjct: 625 LKLFHRMKDDHG--IEPGPDHYACVADLL 651
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 197/617 (31%), Positives = 322/617 (52%), Gaps = 49/617 (7%)
Query: 47 LLSCDSLNPVEGAQL-QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS--VFEDMP- 102
L C + + A+L +L GL +D + +L+ +Y C D + VFE++
Sbjct: 10 LRECTNTKSLRQAKLVHQRILTVGLR-SDVVLCKSLINVY--FACKDHCSARLVFENIDI 66
Query: 103 RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGE 161
R + WNS+VS + K+ D + +F L+ + + +S ++ VI G
Sbjct: 67 RSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGR 126
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
IH +V+K+G +++VA+SLV MY + + ++F ++ RDV SWNT+I + +
Sbjct: 127 MIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRG 186
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
+ KALEL+ RM PN + I++C+ L GK IH K +K E D +V S
Sbjct: 187 DAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNS 246
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRP 340
ALVD Y +CD LE A F ++ K++V+WN++I GY ++ S + + LL ++ G RP
Sbjct: 247 ALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRP 306
Query: 341 NEFTFSHVLRS-SLAFQLLQ---LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
++ T + +L + S + LL +H +IR + Y+ SL+ Y K G + A
Sbjct: 307 SQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLA---- 362
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV-SWNIVIAACAHNGDYKEV 455
ETV L +Q D+V SWN++I+ G++ +
Sbjct: 363 --------------------------ETVFLKTQ---KDVVESWNVMISGYVSVGNWFKA 393
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
++++ M + + PD TF S+LS CS+L L G +H I ++ + +D + + L+D
Sbjct: 394 VDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRL-ETDELLLSALLD 452
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY KCG++ + +IFN + ++V++WT +ISA G +G + AL F EM+ G KPD V
Sbjct: 453 MYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVT 512
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+AVL+AC H GL+ EG++ F +M YG+E ++ Y C++D+L R G L EA I+
Sbjct: 513 FLAVLSACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQQK 572
Query: 636 P-FPPNALIWRTFLEGC 651
P NA + T C
Sbjct: 573 PETRDNAELLSTLFCAC 589
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 260/536 (48%), Gaps = 41/536 (7%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGF-EPTQFTFGGLLSCDSLNPVE--GAQL 61
+V +NS++S YS+ D L++F ++N P FT+ ++ E G +
Sbjct: 69 DVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMI 128
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V+K+G C D V ++L+G+Y + ++ V VF++MP + + +WN+++S F + G
Sbjct: 129 HTVVVKSGHVC-DVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGD 187
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E + LF + RS+ S I S LE G++IH +K F+ + V ++
Sbjct: 188 AEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSA 247
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
LV+MY +C + A ++F+ + + +V+WN++I + +EL RM ++ P+
Sbjct: 248 LVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPS 307
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
QTT ++ +C+ +N + GK +H VI++ ++ D+++ +L+D Y KC ++ A F
Sbjct: 308 QTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFL 367
Query: 302 EISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
+ + SWN +I GY S + ++ + +++ +G +P+ TF+ VL + L
Sbjct: 368 KTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEK 427
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
Q+H I E E +L +L+ Y+K G + +A
Sbjct: 428 GKQIHLSISESRLETDELLLSALLDMYSKCGNVKEA------------------------ 463
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
++ + + + D+VSW ++I+A +G +E L F M+ + PD TF++
Sbjct: 464 --------SRIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLA 515
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+LSAC + G ++ I + + LID+ G+ G + + I +
Sbjct: 516 VLSACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQQ 571
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 192/352 (54%), Gaps = 4/352 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+R+V S+N++IS++ + G E AL +F M FEP + +S C L +E G
Sbjct: 167 MPERDVASWNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERG 226
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ LK F D +V +AL+ +YGR L+ VF+ M RKSLV WNS++ +
Sbjct: 227 KEIHRKYLKKE-FELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVA 285
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + C+ L ++ ++++ ++ S ++L G+ +HG VI++ D ++ +
Sbjct: 286 RGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYI 345
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SL+++YF+C + AE +F + V SWN +I N+ KA+++Y +M V
Sbjct: 346 NCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGV 405
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ TF V+++C+ L GK IH + ++ LE D + SAL+D Y+KC N++ A
Sbjct: 406 QPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASR 465
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVL 349
F+ I K++VSW +I Y S P +++ E+ + G +P+ TF VL
Sbjct: 466 IFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVL 517
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/505 (24%), Positives = 238/505 (47%), Gaps = 41/505 (8%)
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
+ S + ++ +N + L + +H ++ G ++++ SL+N+YF C SA +
Sbjct: 1 MESSKLLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLV 60
Query: 199 FKDVEIR-DVVSWNTIIGALAESENFGKALELYLR-MSVDIVFPNQTTFVYVINSCAGLQ 256
F++++IR DV WN+++ +++ F L+++ R ++ I P+ T+ VI + L
Sbjct: 61 FENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALG 120
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
LG+ IH V+K+ CDV V S+LV YAK + E + F E+ +++ SWN +I
Sbjct: 121 REFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVIS 180
Query: 317 G-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYEN 371
Y + ++ L + + + PN + + + + L ++H ++ +E
Sbjct: 181 SFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFEL 240
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
EYV +L+ Y + L + R V Q+
Sbjct: 241 DEYVNSALVDMYGRCDF----------LEMAREV----------------------FQQM 268
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
R +V+WN +I GD K +EL M P T S+L ACS+ NL G
Sbjct: 269 RRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGK 328
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+HG + ++ ++ +D ++ LID+Y KCG + + +F + V +W +IS
Sbjct: 329 FVHGYVIRS-VVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSV 387
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G +A++ + +M +G +PD V +VL+ C + +G ++ ++ S +E +
Sbjct: 388 GNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESR-LETDELL 446
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMP 636
++D+ + G++KEA +I ++P
Sbjct: 447 LSALLDMYSKCGNVKEASRIFNSIP 471
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 180/551 (32%), Positives = 297/551 (53%), Gaps = 9/551 (1%)
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
+NS++ + G ++ + LF ++ S ++ + +F + + +D G QIHGL+I
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLII 160
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
K + +L V NSLV+ Y +C + A K+F ++ R+VVSW ++I A E A++
Sbjct: 161 KMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVD 220
Query: 229 LYLRMSVD-IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
L+ RM D V PN T V VI++CA L++ G+ ++ + + +E + + SALVD Y
Sbjct: 221 LFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMY 280
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFS 346
KC+ ++ A F E N+ NA+ Y + + ++ +L ++ G RP+ +
Sbjct: 281 MKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISML 340
Query: 347 HVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
+ S + + H ++R G+E+++ + +L+ Y K A ++
Sbjct: 341 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 400
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
V +I+AG Y G+ + + + + +IVSWN +I+A Y+E +E+F YM
Sbjct: 401 TVVTWNSIVAG-YIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYM 459
Query: 463 RAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
++ + D T +S+ SAC L L L ++ I+K I D + L+DM+ +CG
Sbjct: 460 QSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRI-QLDVRLGTTLVDMFSRCG 518
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
S++ IFN +T+R+V WTA I A+ + G +RA+E F EM G KPD V I LT
Sbjct: 519 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALT 578
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC HGGLV++G E+F M + +GV PE HY C+VDLL R G L+EA ++I MP PN
Sbjct: 579 ACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPND 638
Query: 642 LIWRTFLEGCQ 652
+IW + L C+
Sbjct: 639 VIWNSLLAACR 649
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 142/585 (24%), Positives = 278/585 (47%), Gaps = 18/585 (3%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSC-DSLNPVEGAQLQASVL 66
+NS+I Y+ G ++A+ +F+ M+N G P ++TF GL C S + G Q+ ++
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLII 160
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K + D FV +L+ Y G LD VF++M +++V+W S++ + + F +D +
Sbjct: 161 KMD-YAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAV 219
Query: 127 FLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
LF +VR E + S + V VI + +DLE GE+++ + +G + L+ ++LV+M
Sbjct: 220 DLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDM 279
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C I A+++F + ++ N + +AL + M + P++ +
Sbjct: 280 YMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISM 339
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
+ I+SC+ L+N + GKS H V++N E + +AL+D Y KC + A F +SN
Sbjct: 340 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 399
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLII 365
K +V+WN+++ GY + + E N +++ ++ + + + + +
Sbjct: 400 KTVVTWNSIVAGYIENGEVDAAW---ETFNTMPEKNIVSWNTIISALVQENMYEEAIEVF 456
Query: 366 R-MGYENYEYVLGSLMTSYAKSGLISDALA-------FVTALNIPRAVVPANIIAGIYNR 417
M + V G M S A + AL ++ I V + +++R
Sbjct: 457 HYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSR 516
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G + + + L D+ +W I A A G+ + +ELF M + PD F+
Sbjct: 517 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGA 576
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDR 536
L+AC + G + ++K +S + ++D+ G+ G + ++++ +M T+
Sbjct: 577 LTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEP 636
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
N + W +L++A + G + A +++ L P+R +L+
Sbjct: 637 NDVIWNSLLAACRVQGNVEMAAFAAEKIQVLA--PERTGSYVLLS 679
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 228/492 (46%), Gaps = 73/492 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI-NRGFEPTQFTFGGLLS-CDSLNPVE- 57
M +RNVVS+ S+I Y+R + +DA+ +F M+ + P T ++S C L +E
Sbjct: 194 MSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLET 253
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ + +G+ D + +AL+ +Y + +D +F++ +L N++ S +
Sbjct: 254 GEKVYDFIRDSGIEVNDLMI-SALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYV 312
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G ++ + + ++ S + S + I S +++ +G+ HG V++NGF+
Sbjct: 313 RQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN 372
Query: 178 VANSLVNMYFQC-------------------------AG------IWSAEKMFKDVEIRD 206
+ N+L++MY +C AG + +A + F + ++
Sbjct: 373 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKN 432
Query: 207 VVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
+VSWNTII AL + + +A+E++ M S + V + T + + ++C L L K I+
Sbjct: 433 IVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIY 492
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-P 324
+ KN ++ DV +G+ LVD +++C + E A F+ ++N+++ +W A I A +
Sbjct: 493 YYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVE 552
Query: 325 TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
+I L E+++ G +P+ F +G+L T+
Sbjct: 553 RAIELFNEMIEQGLKPDGVVF------------------------------IGAL-TACC 581
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAG----IYNRTGQYNETVKLLSQLE-RPDIVSW 439
GL+ ++ V P ++ G + R G E ++L+ + P+ V W
Sbjct: 582 HGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIW 641
Query: 440 NIVIAACAHNGD 451
N ++AAC G+
Sbjct: 642 NSLLAACRVQGN 653
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 201/657 (30%), Positives = 331/657 (50%), Gaps = 42/657 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEGAQL 61
+NVVS+ +++ AY G + ++ M + G T ++S C SL N + G Q+
Sbjct: 94 KNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQV 153
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V+K GL + V +L+ ++G G ++E VF M ++WNS+++ + ++G
Sbjct: 154 LGHVIKYGLE-TNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGL 212
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ + F + R + ++ ++ G + +L++G IH LV+K G++ + +N+
Sbjct: 213 CKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNT 272
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+ MY AE +F+ + +D++SWN+++ A+ N AL+L M N
Sbjct: 273 LITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGAN 332
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TF + +C+ + + GK +HA VI L +V VG+ALV YAK + A F
Sbjct: 333 YVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQ 392
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLL-- 358
+ ++ V+WNALI G+A P +L+ + G N T S+VL + LA L
Sbjct: 393 TMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLE 452
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+H II G+++ EYV SL+T YAK
Sbjct: 453 HGMPIHAFIILTGFQSDEYVQNSLITMYAK------------------------------ 482
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
G N + + +L + +WN ++AA AH+G +E L+ MR A + D ++F
Sbjct: 483 --CGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFS 540
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
L+A +KL L G LHGL K S+ FV + +DMYGKCG I ++I +
Sbjct: 541 ECLAAAAKLAILEEGQQLHGLAVKLGC-DSNPFVASATMDMYGKCGEIDDVLRIIPRPIN 599
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
R+ ++W L S+ +GF ++A E F EM LG KPD V +++L+AC HGG+V EG+
Sbjct: 600 RSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAY 659
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++ M + +G+ ++ H C++DLL R G EAE I MP P +WR+ L C+
Sbjct: 660 YDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACK 716
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 169/641 (26%), Positives = 297/641 (46%), Gaps = 55/641 (8%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP---VEGAQLQASVLKNG 69
+S + R G +++R F M + G +P+ L++ + +EG Q+ ++K G
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
L +D FVGT+L+ LYG +G + + VF++M K++V+W +++ + +G M ++
Sbjct: 61 LL-SDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIY 119
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
+ ++ +++ VI + ++ G Q+ G VIK G + + VANSL++M+
Sbjct: 120 RRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYF 179
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY---LRMSVDIVFPNQTTFV 246
+ A +F ++ D +SWN++I A + ++L + R+ +I N TT
Sbjct: 180 GSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEI---NSTTLS 236
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
++ C + N G+ IH+ V+K +V + L+ Y+ E A L F + K
Sbjct: 237 TMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEK 296
Query: 307 NIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRS----SLAFQLLQLH 361
+++SWN+++ YA + ++ LL + + N TF+ L + A + LH
Sbjct: 297 DMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILH 356
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
L+I +G V +L+T YAKSGL+ +A
Sbjct: 357 ALVIHVGLHENVIVGNALVTLYAKSGLMIEA----------------------------- 387
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS-LLSA 480
K+ + + D V+WN +I A + + E L+ FK MR + P NY +S +L A
Sbjct: 388 ---KKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGV-PINYITISNVLGA 443
Query: 481 CSKLCN-LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
C + L G +H I T SD +V N LI MY KCG + SS IF+ +T +N
Sbjct: 444 CLAPNDLLEHGMPIHAFIILTG-FQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNAS 502
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
W A+++A +G + AL+ EM G D + L A ++ EG +L +
Sbjct: 503 AWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQL-HGL 561
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
G + +D+ YG E + ++ +P P N
Sbjct: 562 AVKLGCDSNPFVASATMDM---YGKCGEIDDVLRIIPRPIN 599
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 157/581 (27%), Positives = 283/581 (48%), Gaps = 53/581 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M + + +S+NS+I+AY R G +++LR F +M E T +L+ C S++ ++ G
Sbjct: 192 MDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWG 251
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + VLK G + ++ L+ +Y G ++ VF+ M K +++WNS+++ + +
Sbjct: 252 RGIHSLVLKFG-WNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQ 310
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G D + L + +F + S+ + G+ +H LVI G ++V
Sbjct: 311 DGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIV 370
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LV +Y + + A+K+F+ + RD V+WN +IG A+SE +AL+ + M + V
Sbjct: 371 GNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGV 430
Query: 239 FPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
N T V+ +C N +L G IHA +I + D +V ++L+ YAKC +L +
Sbjct: 431 PINYITISNVLGACLA-PNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSS 489
Query: 297 HLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
+ F +++KN +WNA++ A ++ L+E+ + G +EF+FS L ++
Sbjct: 490 NNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKL 549
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+L QLH L +++G ++ +V + M Y K G I D L IPR +
Sbjct: 550 AILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRI-----IPRPI------ 598
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
NR+ +SWNI+ ++ + +G +++ E F M + PD+
Sbjct: 599 ----NRSR-----------------LSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDH 637
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TFVSLLSACS + G + + + K I + C +ID+ G+ G +
Sbjct: 638 VTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIK 697
Query: 532 EM----TDRNVITWTALISALGLNG---FAQRALEKFREME 565
EM TD W +L++A +G ++A+E +++
Sbjct: 698 EMPVSPTDH---VWRSLLAACKTHGNLELGRKAVENLLKLD 735
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 179/592 (30%), Positives = 290/592 (48%), Gaps = 38/592 (6%)
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
V + G+ D F LL LY + G L +F+ MP +++V++ ++V + G E+
Sbjct: 74 VQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEE 133
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
LF L R + ++ L IH K G D V +SL++
Sbjct: 134 AAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLID 193
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
Y C + A +F + +D V+W ++ +E++ AL + +M + PN
Sbjct: 194 AYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFV 253
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
V+ + L +++LGK IH +K + + VG AL+D YAKC +E A F I
Sbjct: 254 LTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIP 313
Query: 305 NKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLR--SSLAFQLL--Q 359
+ +++ W+ LI YA F + + +++ PNEF+ S VL+ +++AF L Q
Sbjct: 314 HDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQ 373
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+H L+I++GYE+ +V +LM YAK + ++L
Sbjct: 374 IHNLVIKLGYESELFVGNALMDVYAKCRNMENSL-------------------------- 407
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
++ L + VSWN +I +G ++ L +F+ MRAA + TF S+L
Sbjct: 408 ------EIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLR 461
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
AC+ ++ +H LI+K+ ++DT VCN LID Y KCG I ++K+F + +V+
Sbjct: 462 ACANTASIKHTVQIHSLIEKS-TFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVV 520
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W A+IS L+G A ALE F M KP+ V +A+L+ C GLV +G+ LF M
Sbjct: 521 SWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSM 580
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ ++P MDHY C+V LL R G L +A K I +P P+ ++WR L C
Sbjct: 581 TMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSC 632
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 171/619 (27%), Positives = 287/619 (46%), Gaps = 47/619 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+RN+VSF +++ Y+ G E+A +F + G E F +L G
Sbjct: 110 MPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLT 169
Query: 61 --LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A K G +AFVG++L+ Y G + VF+ + K VTW ++VS + +
Sbjct: 170 CCIHACACKLG-HDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSE 228
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ ED + F ++ + V+ G+ IHG +K D E V
Sbjct: 229 NDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHV 288
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+L++MY +C I A +F+ + DV+ W+ +I A+S +A E++LRM V
Sbjct: 289 GGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSV 348
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+ + V+ +CA + LG+ IH VIK E ++FVG+AL+D YAKC N+E +
Sbjct: 349 VPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLE 408
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLR----SSL 353
F + + N VSWN +I+GY + ++ + E+ + TFS VLR ++
Sbjct: 409 IFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTAS 468
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+Q+H LI + + N V SL+ +YAK G I DAL
Sbjct: 469 IKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDAL-------------------- 508
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
K+ + + D+VSWN +I+ A +G + LELF M + P++ T
Sbjct: 509 ------------KVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVT 556
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
FV+LLS C + G SL + I S D + C ++ + G+ G + ++K
Sbjct: 557 FVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTC--IVRLLGRAGRLNDALKFIG 614
Query: 532 EM-TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
++ + + + W AL+S+ ++ AL KF + L +P +L+ +
Sbjct: 615 DIPSTPSPMVWRALLSSCVVH--KNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGIL 672
Query: 591 EGMELFERMNRSYGVEPEM 609
+ + L + R+ GV+ E+
Sbjct: 673 DQVALLRKSMRNIGVKKEV 691
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 183/413 (44%), Gaps = 43/413 (10%)
Query: 248 VINSCAGLQNSILGKSIHAKVIKNA--LECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
++ C ++ G+++HA+V++ + D F + L++ YAK L A F +
Sbjct: 53 LLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPE 112
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
+N+VS+ L+ GYA + L LQ G+ N F + +L+ +A L C I
Sbjct: 113 RNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCI 172
Query: 365 ----IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
++G++ +V SL+ +Y+ G +S A + GI +
Sbjct: 173 HACACKLGHDRNAFVGSSLIDAYSLCGAVSHARC---------------VFDGIIWK--- 214
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
D V+W +++ + N ++ L F MR A P+ + S+L A
Sbjct: 215 --------------DAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKA 260
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
L + LG +HG KT + ++ V L+DMY KCG I + +F + +VI
Sbjct: 261 AVCLSSAVLGKGIHGCAVKT-LCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVIL 319
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W+ LIS + ++A E F M P+ +L VL AC + + G ++ +
Sbjct: 320 WSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVI 379
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG-CQ 652
+ G E E+ + ++D+ + +++ + +I ++ N + W T + G CQ
Sbjct: 380 K-LGYESELFVGNALMDVYAKCRNMENSLEIFRSLR-DANEVSWNTIIVGYCQ 430
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
D+Y LL C + G ++H ++++ + DTF N+L+++Y K G + ++ +
Sbjct: 46 DSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARR 105
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV--------- 579
+F+ M +RN++++ L+ L G + A FR ++ G + + L +
Sbjct: 106 LFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDA 165
Query: 580 --LTACRHGGLVREGME----LFERMNRSYGVEPEMDHYHCVVDLLV 620
LT C H + G + + + +Y + + H CV D ++
Sbjct: 166 PGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGII 212
>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 193/665 (29%), Positives = 328/665 (49%), Gaps = 46/665 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS---LNPVEG 58
P + +NS++ + R L M G P++FT + S + PV G
Sbjct: 68 PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPV-G 126
Query: 59 AQLQASVLKNGLFCADAFVGTA--LLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
A + A ++ GL D V A L+ +Y R G + + V +F++MP + +V W +++S
Sbjct: 127 AAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGC 186
Query: 117 GKHGFVEDCMFLFCELVRSE----VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+G + + +VRS + + +L G +HG +K G
Sbjct: 187 VCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGV 246
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ V +SL +MY +C A +F ++ +D+VSW ++IGA + + KA+EL+L
Sbjct: 247 GHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLG 306
Query: 233 MSVDIVFPNQTTFVYVINSC--AGLQNSIL---GKSIHAKVIKNALECDVFVGSALVDFY 287
M + P++ V+ SC AGL N GK+ HA +++ V +G+AL+ Y
Sbjct: 307 MEESGLQPDE-----VVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMY 361
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSH 347
AKC ++ A F + ++ SW+++++ Y L +Q + +EF +
Sbjct: 362 AKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDK-DEFEYDT 420
Query: 348 VLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
S+ +L L R+G + Y + L +
Sbjct: 421 NSLISIISSCSRLGRL--RLGQSAHCYSIKHLAGENSSV--------------------- 457
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
AN + +Y R G ++ K+ ++ D+V+W+ +I++ +H G K+ L L+ M +
Sbjct: 458 ANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGV 517
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P++ T VS++S+C+ L L G +H +K + D +C L+DMY KCG +G +
Sbjct: 518 KPNSATLVSVISSCANLAALEHGELIHSHVKDVGL-ECDLSICTALVDMYMKCGQLGIAR 576
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
K+F+ M +R+V+TW +IS G++G A +AL+ F ME KP+ + +A+L+AC H G
Sbjct: 577 KMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAG 636
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
LV +G ELF RM Y +EP + HY C+VDLL + GHL+EAE +++ MP P+ IW T
Sbjct: 637 LVDKGRELFTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTL 695
Query: 648 LEGCQ 652
L C+
Sbjct: 696 LGACK 700
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 142/566 (25%), Positives = 257/566 (45%), Gaps = 57/566 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI----NRGFEPTQFTF-GGLLSCDSLNP 55
MP+R+VV++ ++IS G + L + M+ + G P T GL +C L
Sbjct: 171 MPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGE 230
Query: 56 VE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+ G L +K G+ + V ++L +Y + ++ +F ++P K LV+W S++
Sbjct: 231 LSVGTCLHGFGVKAGVGHCPSVV-SSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIG 289
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + G E + LF + S + E ++ GL N+ + G+ H +++ F
Sbjct: 290 AYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGD 349
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+L+ N+L++MY +C + A +F+ + RD SW++++ A ++ K LELY M
Sbjct: 350 SVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQ 409
Query: 235 VDIVFPNQTTFVYVINSCAG-------LQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
F ++ F Y NS L LG+S H IK+ + V +AL+ Y
Sbjct: 410 ----FRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMY 465
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFS 346
+C N + A F + K++V+W+ALI Y+ S ++ L ++L G +PN T
Sbjct: 466 GRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLV 525
Query: 347 HVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
V+ S L+ G L+ S+ K + L+ TAL
Sbjct: 526 SVISSCANLAALE----------------HGELIHSHVKDVGLECDLSICTAL------- 562
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
+Y + GQ K+ + D+V+WN++I+ +G+ + L+LF M
Sbjct: 563 -----VDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGN 617
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT----FVCNMLIDMYGKCGS 522
+ P++ TF+++LSAC C+ L L + E S + + C ++D+ GK G
Sbjct: 618 VKPNSLTFLAILSAC---CHAGLVDKGRELFTRMEEYSLEPNLKHYAC--MVDLLGKSGH 672
Query: 523 IGSSVKIFNEMT-DRNVITWTALISA 547
+ + + + M + + W L+ A
Sbjct: 673 LQEAEDVVSAMPIEPDGGIWGTLLGA 698
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 226/490 (46%), Gaps = 46/490 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
+P++++VS+ S+I AY R G+ E A+ +FL M G +P + LL+ + G
Sbjct: 276 LPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGG 335
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
A++++ F +G AL+ +Y + +D +VF + ++ +W+S+V + K
Sbjct: 336 KTFHAAIVRRN-FGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCK 394
Query: 119 HGFVEDCMFLFCELV---RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
G C+ L+ E+ + E +S + +I S L G+ H IK+
Sbjct: 395 AGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGEN 454
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
VAN+L++MY +C A K+F V+ +DVV+W+ +I + + + AL LY +M
Sbjct: 455 SSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLT 514
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ V PN T V VI+SCA L G+ IH+ V LECD+ + +ALVD Y KC L
Sbjct: 515 EGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGI 574
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLA 354
A F + +++V+WN +I GY L +++ G +PN TF +L +
Sbjct: 575 ARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSAC-- 632
Query: 355 FQLLQLHCLIIRMGYENY----EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
H ++ G E + EY L + YA
Sbjct: 633 -----CHAGLVDKGRELFTRMEEYSLEPNLKHYA-------------------------C 662
Query: 411 IAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ + ++G E ++S + PD W ++ AC + +++ L + K A+ P
Sbjct: 663 MVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASD--P 720
Query: 470 DNYTFVSLLS 479
+N + L+S
Sbjct: 721 ENDGYYILMS 730
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 118/272 (43%), Gaps = 16/272 (5%)
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
ALA + L+ PR A +++ Y+ G + PD WN ++ + D
Sbjct: 30 ALAVTSGLS-PRPDFAAKLVSA-YSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD--TFV 509
+ L + MRA+ P +T + SA ++L L +G+++H + ++ D V
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF----REME 565
+ L+ MY +CGS+ +V++F+EM +R+V+ WTA+IS NG L R
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV-DLLVRYGH 624
G +P+ + + L AC G + G L +GV+ + H VV L Y
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCL-----HGFGVKAGVGHCPSVVSSLFSMYTK 262
Query: 625 LKEAEKIITTMP-FPPNALIWRTFLEGCQRCR 655
E P P L+ T L G CR
Sbjct: 263 CDSTEDARILFPELPEKDLVSWTSLIGAY-CR 293
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 176/572 (30%), Positives = 289/572 (50%), Gaps = 45/572 (7%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
+ G L + + +F+ MPRK++V W S++S + ++G E + +F ++V S VA + +
Sbjct: 60 KSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNA 119
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
+ ++ L GEQ+H L ++ GF + + + L+ MY +C + +A+++F ++ D
Sbjct: 120 ALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPD 179
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
VV + ++I A + F A E ++M + PN+ T ++ +C +LG+ IH
Sbjct: 180 VVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP----RVLGQQIHG 235
Query: 267 KVIKNA--LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS- 323
+IK V+ +AL+DFY++ + A F + KN+VSW +++ Y
Sbjct: 236 YLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRL 295
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL-LQLHCLIIRMGYENYEYVLGSLMTS 382
++ + +++ G PNEF S VL + + L QLHC I
Sbjct: 296 EEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAI----------------- 338
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
K LI+D + +N + +Y RTG E +L+++E PD+VSW
Sbjct: 339 --KHDLITD-------------IRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTA 383
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
I+A NG ++ + L M + P+ Y F S+LS+C+ + +L G H L K
Sbjct: 384 ISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALK--- 440
Query: 503 ISSDTFVC--NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
+ D+ +C N LI+MY KCG +GS+ F+ M +V +W +LI +G A +ALE
Sbjct: 441 LGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEV 500
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
F +M G KPD + VL C H G+V EG F M Y P HY C++D+L
Sbjct: 501 FSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLG 560
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G EA ++I MPF P+ALIW+T L C+
Sbjct: 561 RNGRFDEALRMINDMPFEPDALIWKTLLASCK 592
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 140/563 (24%), Positives = 262/563 (46%), Gaps = 54/563 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
MP +NVV++ S++S Y+R G E AL MF M+ G P F L++C L + G
Sbjct: 74 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 133
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + ++ G F DA++G+ L+ +Y R G L VF+ M +V + S++S F +
Sbjct: 134 EQVHSLAVRAG-FAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCR 192
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYE-L 176
+G E ++++ + E + ++ G+QIHG +IK G + +
Sbjct: 193 NGEFELAAEALIQMLKQGLKPNEHTMTTILTACPR----VLGQQIHGYLIKKIGLRSQSV 248
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ +L++ Y + A+ +F + ++VVSW +++ +AL+++ M +
Sbjct: 249 YSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISE 308
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN+ V+ +C + LG+ +H IK+ L D+ V +AL+ Y + +E
Sbjct: 309 GVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEEL 365
Query: 297 HLCFSEISNKNIVSW-NALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
++I N ++VSW A+ + + +I LL ++ G+ PN + FS VL S
Sbjct: 366 EAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADV 425
Query: 356 ----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
Q +Q HCL +++G ++ + N +
Sbjct: 426 ASLDQGMQFHCLALKLGCDS--------------------------------EICTGNAL 453
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y++ GQ + D+ SWN +I A +GD + LE+F MR+ I PD+
Sbjct: 454 INMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDD 513
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLI--KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
TF+ +L C+ + G L+ + + + + C +IDM G+ G ++++
Sbjct: 514 STFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYAC--MIDMLGRNGRFDEALRM 571
Query: 530 FNEMT-DRNVITWTALISALGLN 551
N+M + + + W L+++ L+
Sbjct: 572 INDMPFEPDALIWKTLLASCKLH 594
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 211/469 (44%), Gaps = 37/469 (7%)
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
+N + + A +F + ++VV+W +++ + AL ++ M V PN
Sbjct: 55 LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPND 114
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
+ +CA L G+ +H+ ++ D ++GS L++ Y++C +L A F
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174
Query: 303 ISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
+ + ++V + +LI + + LI++L+ G +PNE T + +L + Q+H
Sbjct: 175 MDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIH 234
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
+I+ K GL S ++ TAL Y+R G++
Sbjct: 235 GYLIK------------------KIGLRSQSVYSSTAL------------IDFYSRNGEF 264
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
+ L ++VSW ++ +G +E L++F M + + P+ + +L AC
Sbjct: 265 KLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC 324
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
++ LG LH K ++I +D V N L+ MYG+ G + + N++ + ++++W
Sbjct: 325 G---SIGLGRQLHCSAIKHDLI-TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSW 380
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
T ISA NGF ++A+ +M GF P+ A +VL++C + +GM+ F +
Sbjct: 381 TTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ-FHCLAL 439
Query: 602 SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G + E+ + ++++ + G + A M + W + + G
Sbjct: 440 KLGCDSEICTGNALINMYSKCGQMGSARLAFDVM-HTHDVTSWNSLIHG 487
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 143/322 (44%), Gaps = 42/322 (13%)
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELL 334
DV + ++ K L A F + KN+V+W +++ GY P ++ + +++
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
+ G PN+F + L + L Q+H L +R G+ ++ L+
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIE--------- 157
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
+Y+R G ++ +++ PD+V + +I+A NG
Sbjct: 158 -----------------------MYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNG 194
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFV 509
+++ E M + P+ +T ++L+AC ++ LG +HG LIKK + S +
Sbjct: 195 EFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYS 250
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
LID Y + G + +F+ + +NV++W +++ +G + AL+ F +M G
Sbjct: 251 STALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGV 310
Query: 570 KPDRVALIAVLTACRHGGLVRE 591
P+ AL VL AC GL R+
Sbjct: 311 DPNEFALSIVLGACGSIGLGRQ 332
>gi|302782183|ref|XP_002972865.1| hypothetical protein SELMODRAFT_51647 [Selaginella moellendorffii]
gi|300159466|gb|EFJ26086.1| hypothetical protein SELMODRAFT_51647 [Selaginella moellendorffii]
Length = 597
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 175/587 (29%), Positives = 296/587 (50%), Gaps = 43/587 (7%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
+V ++ +YG+ G +D+ VF + +++ +WN I++ F ++G E + LF ++R
Sbjct: 15 YVSNMIVQMYGKCGSVDDAWIVFSSIQARNVFSWNMIIAAFAQNGHPERSVALFWRMIRE 74
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
E + + + +H L ++L G +IH L I G + + V ++V MY + + A
Sbjct: 75 EPGIIPTR-ITFLHALEKLKNLAEGRKIHELAITVGLESDPAVGTAIVTMYGKSRSLADA 133
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
+++F ++ RDVV+W +I A ++ + +AL+LY M D V PNQ TF VI++CA L
Sbjct: 134 KRVFDQLKRRDVVAWTALITAYTQNGHCEEALDLYSSMDPDGVAPNQYTFTIVIDACAEL 193
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
+G +IHA++ LE + V ++L++ Y C L A F + ++ VSWN++I
Sbjct: 194 GRLDVGIAIHARITAAGLESWIEVANSLINLYGNCKRLRDAERIFQRMPRRSSVSWNSMI 253
Query: 316 LGYASKSSPTSIFLLIELLQ--LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE 373
YA P L + ++ + + TF +VL + + + L
Sbjct: 254 AAYAHNGHPGDAIDLYKRMRGDGSVKLDPVTFVNVLGACYSQEDLA-------------- 299
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
A + DA+ A + +V A+ +Y R G E++ ++E
Sbjct: 300 ----------AGRSIHRDAI----ARGLGSHLVLASAAVSMYGRCGSVEESMATFERMEI 345
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSS 492
D V+W+ VIAA A NG+ L ++ M ++ P+ TF+S+L ACS G
Sbjct: 346 KDGVAWSAVIAALAQNGESSSALHFYRRMIWSSSARPNEATFISVLEACSFADE---GIK 402
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-------TDRNVITWTALI 545
+H I + I+ S T + + +MY KCG + + +IF+ M N ++W +I
Sbjct: 403 IHQHIVDSGIVHS-TMISTAIFNMYAKCGRLDRAREIFSSMRASRGSFQSANDVSWMNMI 461
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
SAL +G ALE FREM G KP + I++L C H G + +G+ F M + +G+
Sbjct: 462 SALARHGSIDEALELFREMRLEGGKPSEIVFISILHGCSHSGTMEQGLGHFLAMIQDHGL 521
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
P ++HY C++DLL R GHL A+ ++ MPF P+A W FL C+
Sbjct: 522 APRVEHYGCLIDLLGRGGHLDLAQDLVDQMPFEPDARAWSNFLGSCR 568
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 163/588 (27%), Positives = 282/588 (47%), Gaps = 52/588 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINR--GFEPTQFTFGGLLSCDSL-NPVEGAQ 60
RNV S+N II+A+++ G+ E ++ +F MI G PT+ TF L + + L N EG +
Sbjct: 43 RNVFSWNMIIAAFAQNGHPERSVALFWRMIREEPGIIPTRITF--LHALEKLKNLAEGRK 100
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ + GL +D VGTA++ +YG+ L + VF+ + R+ +V W ++++ + ++G
Sbjct: 101 IHELAITVGLE-SDPAVGTAIVTMYGKSRSLADAKRVFDQLKRRDVVAWTALITAYTQNG 159
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
E+ + L+ + VA + +F VI + L+ G IH + G + + VAN
Sbjct: 160 HCEEALDLYSSMDPDGVAPNQYTFTIVIDACAELGRLDVGIAIHARITAAGLESWIEVAN 219
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD-IVF 239
SL+N+Y C + AE++F+ + R VSWN++I A A + + G A++LY RM D V
Sbjct: 220 SLINLYGNCKRLRDAERIFQRMPRRSSVSWNSMIAAYAHNGHPGDAIDLYKRMRGDGSVK 279
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
+ TFV V+ +C ++ G+SIH I L + + SA V Y +C ++E +
Sbjct: 280 LDPVTFVNVLGACYSQEDLAAGRSIHRDAIARGLGSHLVLASAAVSMYGRCGSVEESMAT 339
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSI--FLLIELLQLGYRPNEFTFSHVLRS-SLAFQ 356
F + K+ V+W+A+I A +S F + RPNE TF VL + S A +
Sbjct: 340 FERMEIKDGVAWSAVIAALAQNGESSSALHFYRRMIWSSSARPNEATFISVLEACSFADE 399
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
+++H I+ G + + ++ YAK G + A +++ R
Sbjct: 400 GIKIHQHIVDSGIVHSTMISTAIFNMYAKCGRLDRAREIFSSMRASRG------------ 447
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ + VSW +I+A A +G E LELF+ MR P F+S
Sbjct: 448 -------------SFQSANDVSWMNMISALARHGSIDEALELFREMRLEGGKPSEIVFIS 494
Query: 477 LLSACSKLCNL--ALGSSL-----HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+L CS + LG L HGL + E + C LID+ G+ G + + +
Sbjct: 495 ILHGCSHSGTMEQGLGHFLAMIQDHGLAPRVE-----HYGC--LIDLLGRGGHLDLAQDL 547
Query: 530 FNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
++M + + W+ + + L+ RA + + +P++ A+
Sbjct: 548 VDQMPFEPDARAWSNFLGSCRLHSDRDRA--EAAAIRVFELEPEKAAI 593
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 227/483 (46%), Gaps = 51/483 (10%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
+H + + G V+N +V MY +C + A +F ++ R+V SWN II A A++ +
Sbjct: 1 LHCWIRERGHGSSTYVSNMIVQMYGKCGSVDDAWIVFSSIQARNVFSWNMIIAAFAQNGH 60
Query: 223 FGKALELYLRMSVDI--VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
+++ L+ RM + + P + TF++ + L+N G+ IH I LE D VG
Sbjct: 61 PERSVALFWRMIREEPGIIPTRITFLHALEK---LKNLAEGRKIHELAITVGLESDPAVG 117
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYR 339
+A+V Y K +L A F ++ +++V+W ALI Y ++ L + G
Sbjct: 118 TAIVTMYGKSRSLADAKRVFDQLKRRDVVAWTALITAYTQNGHCEEALDLYSSMDPDGVA 177
Query: 340 PNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
PN++TF+ V+ + L +H I G E++ V SL+ Y + DA
Sbjct: 178 PNQYTFTIVIDACAELGRLDVGIAIHARITAAGLESWIEVANSLINLYGNCKRLRDA--- 234
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
++ ++ R VSWN +IAA AHNG +
Sbjct: 235 -----------------------------ERIFQRMPRRSSVSWNSMIAAYAHNGHPGDA 265
Query: 456 LELFKYMRA-ARIYPDNYTFVSLLSACSKLCNLALGSSLH-GLIKKTEIISSDTFVCNML 513
++L+K MR + D TFV++L AC +LA G S+H I + + S + +
Sbjct: 266 IDLYKRMRGDGSVKLDPVTFVNVLGACYSQEDLAAGRSIHRDAIARG--LGSHLVLASAA 323
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF-LGFKPD 572
+ MYG+CGS+ S+ F M ++ + W+A+I+AL NG + AL +R M + +P+
Sbjct: 324 VSMYGRCGSVEESMATFERMEIKDGVAWSAVIAALAQNGESSSALHFYRRMIWSSSARPN 383
Query: 573 RVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII 632
I+VL AC EG+++ + + S V M + ++ + G L A +I
Sbjct: 384 EATFISVLEAC---SFADEGIKIHQHIVDSGIVHSTMIST-AIFNMYAKCGRLDRAREIF 439
Query: 633 TTM 635
++M
Sbjct: 440 SSM 442
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 135/266 (50%), Gaps = 19/266 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG---FEPTQFT--FGGLLSCDSLNP 55
MP R+ VS+NS+I+AY+ G+ DA+ ++ M G +P F G S + L
Sbjct: 241 MPRRSSVSWNSMIAAYAHNGHPGDAIDLYKRMRGDGSVKLDPVTFVNVLGACYSQEDL-- 298
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G + + GL + + +A + +YGR G ++E ++ FE M K V W+++++
Sbjct: 299 AAGRSIHRDAIARGL-GSHLVLASAAVSMYGRCGSVEESMATFERMEIKDGVAWSAVIAA 357
Query: 116 FGKHGFVEDCMFLFCELVRSEVAL-TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
++G + + ++ S A E++F+ V+ S + G +IH ++ +G +
Sbjct: 358 LAQNGESSSALHFYRRMIWSSSARPNEATFISVLEACSFADE---GIKIHQHIVDSGIVH 414
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDV-------EIRDVVSWNTIIGALAESENFGKAL 227
+++ ++ NMY +C + A ++F + + + VSW +I ALA + +AL
Sbjct: 415 STMISTAIFNMYAKCGRLDRAREIFSSMRASRGSFQSANDVSWMNMISALARHGSIDEAL 474
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCA 253
EL+ M ++ P++ F+ +++ C+
Sbjct: 475 ELFREMRLEGGKPSEIVFISILHGCS 500
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 17/184 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI-NRGFEPTQFTFGGLLSCDSLNPVEGA 59
M ++ V+++++I+A ++ G AL + MI + P + TF +L S EG
Sbjct: 343 MEIKDGVAWSAVIAALAQNGESSSALHFYRRMIWSSSARPNEATFISVLEACSFAD-EGI 401
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM--PRKSL-----VTWNSI 112
++ ++ +G+ + + TA+ +Y + G LD +F M R S V+W ++
Sbjct: 402 KIHQHIVDSGIVHS-TMISTAIFNMYAKCGRLDRAREIFSSMRASRGSFQSANDVSWMNM 460
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGE-------QIHG 165
+S +HG +++ + LF E+ +E F+ ++HG S+ +E G Q HG
Sbjct: 461 ISALARHGSIDEALELFREMRLEGGKPSEIVFISILHGCSHSGTMEQGLGHFLAMIQDHG 520
Query: 166 LVIK 169
L +
Sbjct: 521 LAPR 524
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/556 (30%), Positives = 289/556 (51%), Gaps = 38/556 (6%)
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
MP ++ V++ +++ + + +++ + LF + R L F ++ L + + E
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
+H + K G + V +L++ Y C + SA + F + +D+VSW ++ AE+
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
+ F +L+L+ M + PN TF V+ +C GL+ +GKS+H V+K E D++VG
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYR 339
L+D Y K + F E+ +++ W+ +I YA S S ++ L ++ +
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240
Query: 340 PNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
PN+FTF+ VL+S + + LQL HC ++++G + +V +LM YAK
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAK---------- 290
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
G+ + ++KL +L + V+WN +I +GD +
Sbjct: 291 ----------------------CGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKA 328
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
L L+K M ++ T+ S+L AC+ L + LG+ +H L KT I D V N LID
Sbjct: 329 LSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKT-IYDKDVVVGNALID 387
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY KCGSI ++ +F+ +++R+ I+W A+IS ++G AL+ F+ M+ P+++
Sbjct: 388 MYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLT 447
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+++L+AC + GL+ G F+ M + YG+EP M+HY C+V LL R GHL +A K+I +
Sbjct: 448 FVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEI 507
Query: 636 PFPPNALIWRTFLEGC 651
P PN +WR L C
Sbjct: 508 PLEPNVKVWRALLGAC 523
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 161/555 (29%), Positives = 274/555 (49%), Gaps = 41/555 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MPDRN VSF ++I Y + +++ + +F + G E F F +L L VE A+
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKL--LVSVECAE 58
Query: 61 L----QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
L A + K G ++AFVGTAL+ Y G ++ F+ + K +V+W +V+ +
Sbjct: 59 LAYSLHACIYKLG-HESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACY 117
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ +D + LF E+ +F GV+ + G+ +HG V+K ++ +L
Sbjct: 118 AENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDL 177
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V L+++Y + ++F+++ DV+ W+ +I A+S +A+EL+ +M
Sbjct: 178 YVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRA 237
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PNQ TF V+ SCA ++N LGK +H V+K L+ +VFV +AL+D YAKC L+ +
Sbjct: 238 FVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNS 297
Query: 297 HLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F E+ N+N V+WN +I+GY S ++ L +L+ + +E T+S VLR+ +
Sbjct: 298 MKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASL 357
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
++L I + SL T Y K VV N + +Y
Sbjct: 358 AAMELGTQIHSL----------SLKTIYDKD------------------VVVGNALIDMY 389
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G + L D +SWN +I+ + +G E L+ F+ M+ P+ TFV
Sbjct: 390 AKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFV 449
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
S+LSACS L +G + + + I + + C ++ + G+ G + +VK+ E+
Sbjct: 450 SILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTC--MVWLLGRSGHLDKAVKLIEEI 507
Query: 534 T-DRNVITWTALISA 547
+ NV W AL+ A
Sbjct: 508 PLEPNVKVWRALLGA 522
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/512 (31%), Positives = 273/512 (53%), Gaps = 42/512 (8%)
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
+IH S + L G +H + IK +++V+N ++N+Y +C + A ++F ++ R+
Sbjct: 9 LIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERN 68
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
+VSW+ +I + AL L+ ++++ PN+ + VI++CA L+ + GK IH
Sbjct: 69 LVSWSAMISGYEQIGEPISALGLFSKLNI---VPNEYVYASVISACASLKGLVQGKQIHG 125
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS 326
+ +K L+ FV +AL+ Y KC A L ++E N V++NALI G+ P
Sbjct: 126 QALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDK 185
Query: 327 IFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMT 381
F ++ ++ Q G+ P+ FTF +L + + L+ LHC I++
Sbjct: 186 GFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKL------------ 233
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
++ AF+ N+I +Y++ E K +E D++SWN
Sbjct: 234 ---------NSTAFI-----------GNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNT 273
Query: 442 VIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
I++C+H D+++ LE FK M R+ PD +TF S L+ACS L ++ G +HG + +T
Sbjct: 274 FISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRT 333
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
+ D N LI+MY KCG I + IF++M +N+++W +I+ G +GF +A E
Sbjct: 334 RLYQ-DVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFEL 392
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
F +M+ +G KPD V + +LTA H GLV EG+ F M +YG+ PE++H+ C++DLL
Sbjct: 393 FAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLG 452
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G L EA++ + PF + ++ + L C+
Sbjct: 453 RAGRLNEAKEYMKKFPFGHDTVVLGSLLSACR 484
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/503 (25%), Positives = 230/503 (45%), Gaps = 43/503 (8%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G L A +K +D V +L LY + L E VF++M ++LV+W++++S +
Sbjct: 21 QGLPLHAIAIKTATR-SDVIVSNHILNLYAKCRKLREARQVFDEMSERNLVSWSAMISGY 79
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ G + LF +L + E + VI ++ + L G+QIHG +K G D
Sbjct: 80 EQIGEPISALGLFSKL---NIVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVS 136
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V+N+L+ MY +C A + + + V++N +I E++ K E+ M D
Sbjct: 137 FVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMMYQD 196
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
FP++ TFV ++ +C + G+ +H + IK L F+G+ ++ Y+K + LE A
Sbjct: 197 GFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEA 256
Query: 297 HLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLA 354
F I K+++SWN I + ++ E+L + RP+EFTF+ L +
Sbjct: 257 EKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSG 316
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ Q+H +IR +L+ YAK G I+ A
Sbjct: 317 LASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYY---------------- 360
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ S++E ++VSWN +IA ++G + ELF M+ + PD
Sbjct: 361 ----------------IFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPD 404
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ TFV LL+A + + G +++T IS + + LID+ G+ G + + +
Sbjct: 405 SVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYM 464
Query: 531 NEMT-DRNVITWTALISALGLNG 552
+ + + +L+SA L+G
Sbjct: 465 KKFPFGHDTVVLGSLLSACRLHG 487
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 224/465 (48%), Gaps = 54/465 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNP-VEG 58
M +RN+VS++++IS Y + G AL +F + P ++ + ++S C SL V+G
Sbjct: 64 MSERNLVSWSAMISGYEQIGEPISALGLFSKL---NIVPNEYVYASVISACASLKGLVQG 120
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ LK GL +FV AL+ +Y + G + + + + + V +N++++
Sbjct: 121 KQIHGQALKFGLDSV-SFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALIT---- 175
Query: 119 HGFVE----DCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
GFVE D F ++ + + +FVG++ ++ DL+ GE +H IK +
Sbjct: 176 -GFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLN 234
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ N ++ MY + + AEK F+ +E +D++SWNT I + + + KALE + M
Sbjct: 235 STAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEM 294
Query: 234 SVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ V P++ TF + +C+GL + GK IH +I+ L DV G+AL++ YAKC
Sbjct: 295 LNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGC 354
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRS 351
+ A+ FS++ ++N+VSWN +I G+ + F L ++ +G +P+ TF
Sbjct: 355 IAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFV----- 409
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA--- 408
L+T+ +GL+ + L + ++ + P
Sbjct: 410 --------------------------GLLTASNHAGLVDEGLVYFNSMEETYGISPEIEH 443
Query: 409 -NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
+ + + R G+ NE + + + D V +++AC +GD
Sbjct: 444 FSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLLSACRLHGD 488
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 130/285 (45%), Gaps = 13/285 (4%)
Query: 375 VLGSLM-----TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
++GSL+ T + GL A+A TA V+ +N I +Y + + E ++
Sbjct: 5 LVGSLIHQCSKTKALRQGLPLHAIAIKTATR--SDVIVSNHILNLYAKCRKLREARQVFD 62
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
++ ++VSW+ +I+ G+ L LF + I P+ Y + S++SAC+ L L
Sbjct: 63 EMSERNLVSWSAMISGYEQIGEPISALGLFSKLN---IVPNEYVYASVISACASLKGLVQ 119
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G +HG K + S +FV N LI MY KCG ++ +NE + N + + ALI+
Sbjct: 120 GKQIHGQALKFGL-DSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFV 178
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
N + E R M GF PDR + +L C ++ G EL +
Sbjct: 179 ENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRG-ELLHCQTIKLKLNSTA 237
Query: 610 DHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC 654
+ ++ + + L+EAEK ++ + + W TF+ C C
Sbjct: 238 FIGNLIITMYSKLNLLEEAEKAFRSIE-EKDLISWNTFISSCSHC 281
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 21/152 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M +N+VS+N++I+ + G+ A +F M G +P TF GLL+ A
Sbjct: 365 MEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLT---------AS 415
Query: 61 LQASVLKNGLFCADAFVGT-----------ALLGLYGRHGCLDEVVSVFEDMP-RKSLVT 108
A ++ GL ++ T L+ L GR G L+E + P V
Sbjct: 416 NHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVV 475
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALT 140
S++S HG V+ +L++ + A T
Sbjct: 476 LGSLLSACRLHGDVDTGKCFARQLLKLQPATT 507
>gi|302756495|ref|XP_002961671.1| hypothetical protein SELMODRAFT_264 [Selaginella moellendorffii]
gi|300170330|gb|EFJ36931.1| hypothetical protein SELMODRAFT_264 [Selaginella moellendorffii]
Length = 934
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 179/658 (27%), Positives = 325/658 (49%), Gaps = 30/658 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP +V+ ++++ISA+ C E++LR+F M G P T +LS C+ +E G
Sbjct: 268 MPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETG 327
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V++ G + D VG A++ +YG+ G L++ VF +PR+S+VT N ++
Sbjct: 328 KGIHECVVEAG-YEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRSVVTCNGMMGACAV 386
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + LF +V + +F+ + S L GE H +++ G + ++ V
Sbjct: 387 QGDSSGALKLFRYMVHEGIEFDNITFLSALCACSGTSGLSHGEFFHARMLECGLELDIFV 446
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN+LVNMY +C + +AE +F+++ +DV +WN +I A ++E L ++ M
Sbjct: 447 ANALVNMYGKCGKVEAAEHVFEELPEQDVRTWNAMILAYVQNEEERSGLLVFRHMMQSGY 506
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ TF +N+C + + +H+ + + + + V +ALV Y + LE +
Sbjct: 507 KPDEVTFAITLNAC---YHPRFLRDVHSLISETGIS-NTVVQNALVVMYGRFGLLEEGYQ 562
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F ++ ++I SWN +I A N F+HV +S + L
Sbjct: 563 VFEKLDQESITSWNVMIASCAQTCW-----------------NSVIFAHV-QSGRDSEAL 604
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL----NIPRAVVPANIIAGI 414
++ + + G + +++ +Y+ G+ + ++ A+ ++ V N + +
Sbjct: 605 KMFWRMQQAGVWPDKTSFVAVVKAYSNVGMTEPEIDWLRAVIANSDVEDGVPIGNALISM 664
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y R G + + L + D V+WN +++ ++ ++LF+ M PD T
Sbjct: 665 YGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKVTI 724
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+++L+ C+ L L G ++ + T + S++ + N +++MY KCGS + +IF+ M
Sbjct: 725 LTVLNVCASLPALQEGKAICVWLDHTPL-SANQMIGNAILNMYAKCGSRDEARRIFSVMQ 783
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
R+ ++W ALI A G + A + F+ M+ G PD V +L+ C HGGL+ E ++
Sbjct: 784 GRDAVSWNALIGAYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVCSHGGLLGEAVK 843
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M Y VE E HY C+VDLL R G + EAE++ MP + ++W T L CQ
Sbjct: 844 WFRWMREDYYVEAETGHYGCIVDLLGRLGRVPEAEEVAEKMPAGTDPIVWTTLLSACQ 901
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 181/667 (27%), Positives = 329/667 (49%), Gaps = 58/667 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPVEGA 59
M + N V++NS++ A+ + VE+A+ ++ M+ GF P++ TF +L+ SL +
Sbjct: 167 MEEWNTVAWNSLMGAFIQHDRVEEAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHG 226
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+L L D V TAL+ +YG+ G + E V VF+ MPR ++ W++++S
Sbjct: 227 KLVHDTLAEAGHEDDVVVQTALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNC 286
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
E+ + LF ++ + V V+ Q LE G+ IH V++ G++ +L+V
Sbjct: 287 AEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVG 346
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N++V+MY +C + A +F V R VV+ N ++GA A + AL+L+ M + +
Sbjct: 347 NAIVSMYGKCGSLEDAWDVFHRVPRRSVVTCNGMMGACAVQGDSSGALKLFRYMVHEGIE 406
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
+ TF+ + +C+G G+ HA++++ LE D+FV +ALV+ Y KC +E A
Sbjct: 407 FDNITFLSALCACSGTSGLSHGEFFHARMLECGLELDIFVANALVNMYGKCGKVEAAEHV 466
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLL 358
F E+ +++ +WNA+IL Y S L+ ++Q GY+P+E TF+ L + + L
Sbjct: 467 FEELPEQDVRTWNAMILAYVQNEEERSGLLVFRHMMQSGYKPDEVTFAITLNACYHPRFL 526
Query: 359 Q-LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+ +H LI G N V N + +Y R
Sbjct: 527 RDVHSLISETGISN---------------------------------TVVQNALVVMYGR 553
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACA------------HNGDYKEVLELFKYMRAA 465
G E ++ +L++ I SWN++IA+CA +G E L++F M+ A
Sbjct: 554 FGLLEEGYQVFEKLDQESITSWNVMIASCAQTCWNSVIFAHVQSGRDSEALKMFWRMQQA 613
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSS----LHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
++PD +FV+++ A S N+ + L +I ++ + + N LI MYG+CG
Sbjct: 614 GVWPDKTSFVAVVKAYS---NVGMTEPEIDWLRAVIANSD-VEDGVPIGNALISMYGRCG 669
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
S G + +F+ M +R+ +TW ++S + +++ FR+M G PD+V ++ VL
Sbjct: 670 SFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKVTILTVLN 729
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
C ++EG + ++ + +M + ++++ + G EA +I + M +A
Sbjct: 730 VCASLPALQEGKAICVWLDHTPLSANQMIG-NAILNMYAKCGSRDEARRIFSVMQ-GRDA 787
Query: 642 LIWRTFL 648
+ W +
Sbjct: 788 VSWNALI 794
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 161/660 (24%), Positives = 310/660 (46%), Gaps = 55/660 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQ 62
N+V++ ++I+AY+R G + A+R+F M G P + T + + N +G ++
Sbjct: 73 NLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGKKIH 132
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
A + N +D +G++L+ +YG+ G L E +F+ M + V WNS++ F +H V
Sbjct: 133 AYLSCN----SDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFIQHDRV 188
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
E+ M L+ E+++ + +F+ V+ +S+ + L G+ +H + + G + +++V +L
Sbjct: 189 EEAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLAEAGHEDDVVVQTAL 248
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
VNMY +C + A ++F + DV+ W+ +I A + ++L L+ +M ++ PN
Sbjct: 249 VNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNN 308
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T V V+++C G Q GK IH V++ E D+ VG+A+V Y KC +LE A F
Sbjct: 309 VTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHR 368
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHC 362
+ +++V+ N ++ A + + L F +++ + F +
Sbjct: 369 VPRRSVVTCNGMMGACAVQGDSSGALKL--------------FRYMVHEGIEFDNITF-- 412
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDAL--AFVTALNIPRAVVPANIIAGIYNRTGQ 420
L +L SGL A + + + AN + +Y + G+
Sbjct: 413 -------------LSALCACSGTSGLSHGEFFHARMLECGLELDIFVANALVNMYGKCGK 459
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+ +L D+ +WN +I A N + + L +F++M + PD TF L+A
Sbjct: 460 VEAAEHVFEELPEQDVRTWNAMILAYVQNEEERSGLLVFRHMMQSGYKPDEVTFAITLNA 519
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C L +H LI +T I S+T V N L+ MYG+ G + ++F ++ ++ +
Sbjct: 520 CYHPRFL---RDVHSLISETGI--SNTVVQNALVVMYGRFGLLEEGYQVFEKLDQESITS 574
Query: 541 WTALISALG------------LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
W +I++ +G AL+ F M+ G PD+ + +AV+ A + G+
Sbjct: 575 WNVMIASCAQTCWNSVIFAHVQSGRDSEALKMFWRMQQAGVWPDKTSFVAVVKAYSNVGM 634
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
++ + + VE + + ++ + R G +A + +M +A+ W T +
Sbjct: 635 TEPEIDWLRAVIANSDVEDGVPIGNALISMYGRCGSFGKARDLFDSMA-ERDAVTWNTMM 693
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 240/497 (48%), Gaps = 37/497 (7%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK--- 200
FV ++ S +DL G QIH + ++ + +V N L+ MY +C + A ++F
Sbjct: 8 FVDLLRQCSRSKDLARGRQIHASITRSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLL 67
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
+ + ++V+W +I A A + A+ L+ +M ++ P++ T V + +C +N
Sbjct: 68 ETSVVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLED 127
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
GK IHA + N+ DV +GS+L+ Y KC +L A L F + N V+WN+L+ +
Sbjct: 128 GKKIHAYLSCNS---DVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFIQ 184
Query: 321 KSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
++ L E+LQ G+ P+ TF VL + + + L+ L+
Sbjct: 185 HDRVEEAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLV--------------- 229
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+ A++G D VV + +Y + G E V++ ++ R D++ W
Sbjct: 230 HDTLAEAGHEDD-------------VVVQTALVNMYGKCGSVVEAVEVFDRMPRHDVILW 276
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+ VI+A + +Y+E L LF+ M+ P+N T VS+LSAC L G +H + +
Sbjct: 277 SAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVVE 336
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
D V N ++ MYGKCGS+ + +F+ + R+V+T ++ A + G + AL+
Sbjct: 337 AG-YEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRSVVTCNGMMGACAVQGDSSGALK 395
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
FR M G + D + ++ L AC + G E F G+E ++ + +V++
Sbjct: 396 LFRYMVHEGIEFDNITFLSALCACSGTSGLSHG-EFFHARMLECGLELDIFVANALVNMY 454
Query: 620 VRYGHLKEAEKIITTMP 636
+ G ++ AE + +P
Sbjct: 455 GKCGKVEAAEHVFEELP 471
>gi|115445617|ref|NP_001046588.1| Os02g0290000 [Oryza sativa Japonica Group]
gi|47847947|dbj|BAD21737.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536119|dbj|BAF08502.1| Os02g0290000 [Oryza sativa Japonica Group]
Length = 930
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 190/668 (28%), Positives = 341/668 (51%), Gaps = 20/668 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE---PTQFTFGGLLS-CDSLNPV 56
M + V N +I+A SR G D +F M+ G + PT T +L C L +
Sbjct: 155 MSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVL 214
Query: 57 E-GAQLQASVLKNGLFCADAFVGTALLGLYGRHG---CLDEVVSVFEDMPRKSLVTWNSI 112
G + V+K GL D G AL+ +Y + G +D+ F + K +V+WNSI
Sbjct: 215 RAGRSIHGYVIKTGLE-FDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSWNSI 273
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS-NEQDLEFGEQIHGLVIKNG 171
++ + ++G E+ + LF +++ E S+ V+ S E +G++IHG V+++G
Sbjct: 274 IAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHG 333
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
+ ++ V+N+L+ Y + + + E +F+ ++ D+V+WNT+I + +AL+L+
Sbjct: 334 LEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQ 393
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKC 290
+ + P+ + + ++ +CA + N +G +H + ++ L + + +ALV FY++C
Sbjct: 394 GLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQC 453
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF--LLIELLQLGYRPNEFTFSHV 348
D + A F I NK+ VSWNA++ A+ F LL E+ + + T ++
Sbjct: 454 DRFDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNI 513
Query: 349 LRSSL--AFQLLQ-LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+R S +++Q H +R+GY V +++ +YAK G + DA +L R +
Sbjct: 514 IRMSTFCGIKMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSL-AGRNI 572
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
V N + Y + + + + D+ +WN++ A N + LF +++
Sbjct: 573 VTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSE 632
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ PD + ++LSAC L ++ L HG + + + D + L+D Y KCG+I +
Sbjct: 633 GLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASL--EDIHLEGALLDAYSKCGNIAN 690
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ +F ++++ +TA+I A ++G A++A+E F +M L KPD V L A+L+AC H
Sbjct: 691 AYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSH 750
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM-PFPPNALIW 644
GLV G+++F+ + YGVEP +H C+VDLL R G L++A M P NA W
Sbjct: 751 AGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARSGRLQDAYSFALDMPPHVVNANAW 810
Query: 645 RTFLEGCQ 652
+ L C+
Sbjct: 811 GSLLGACK 818
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 147/604 (24%), Positives = 263/604 (43%), Gaps = 76/604 (12%)
Query: 28 MFLYMINRGFEPTQFTFGGLLSCDSLNP------VEGAQLQASVLKNGLFCADAFVGTAL 81
+ +M+ RG P + + S P G L +K G + A V A+
Sbjct: 77 LLRWMLARGLRPNRLALAAAVKSSSALPDCRGGAALGRCLHGLAVKVG-YADGAVVAKAV 135
Query: 82 LGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS---EVA 138
+ +YGR G L + +VF++M V N +++ + G D LF ++ S E
Sbjct: 136 MDMYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESM 195
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG---IWSA 195
T + V+ + + L G IHG VIK G +++ L N+LV+MY +C G + A
Sbjct: 196 PTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDA 255
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
F + +DVVSWN+II +E+ F +AL L+ +M + PN +T V+ C+ +
Sbjct: 256 HLAFSTICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLV 315
Query: 256 Q-NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
+ GK IH V+++ LE D+ V +AL+ Y+K + F +IV+WN +
Sbjct: 316 EYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTV 375
Query: 315 ILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE 373
I GY P+ L + LL G P+ + +L + L R+G +
Sbjct: 376 IAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNL-------RVGIRVHG 428
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
Y+ + L+ + T+L N + Y++ +++ + ++
Sbjct: 429 YI-------FRHPELLQE-----TSL--------MNALVSFYSQCDRFDAAFRSFITIQN 468
Query: 434 PDIVSWNIVIAACAHNGDY-KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
D VSWN +++ACA++ + ++ L M D+ T ++++ S C + +
Sbjct: 469 KDSVSWNAILSACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNIIRM-STFCGIKMVQE 527
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISA----- 547
HG + + D+ V N ++D Y KCG + + +F + RN++T +IS
Sbjct: 528 SHGYSLRVG-YTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNN 586
Query: 548 ------LGLNGFAQRALEK--------------------FREMEFLGFKPDRVALIAVLT 581
+ N A++ L F +++ G PD +++ +L+
Sbjct: 587 CVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILS 646
Query: 582 ACRH 585
AC H
Sbjct: 647 ACIH 650
>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
Length = 918
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 193/665 (29%), Positives = 328/665 (49%), Gaps = 46/665 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS---LNPVEG 58
P + +NS++ + R L M G P++FT + S + PV G
Sbjct: 68 PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPV-G 126
Query: 59 AQLQASVLKNGLFCADAFVGTA--LLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
A + A ++ GL D V A L+ +Y R G + + V +F++MP + +V W +++S
Sbjct: 127 AAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGC 186
Query: 117 GKHGFVEDCMFLFCELVRSE----VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+G + + +VRS + + +L G +HG +K G
Sbjct: 187 VCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGV 246
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ V +SL +MY +C A +F ++ +D+VSW ++IGA + + KA+EL+L
Sbjct: 247 GHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLG 306
Query: 233 MSVDIVFPNQTTFVYVINSC--AGLQNSIL---GKSIHAKVIKNALECDVFVGSALVDFY 287
M + P++ V+ SC AGL N GK+ HA +++ V +G+AL+ Y
Sbjct: 307 MEESGLQPDE-----VVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMY 361
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSH 347
AKC ++ A F + ++ SW+++++ Y L +Q + +EF +
Sbjct: 362 AKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDK-DEFEYDT 420
Query: 348 VLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
S+ +L L R+G + Y + L +
Sbjct: 421 NSLISIISSCSRLGRL--RLGQSAHCYSIKHLAGENSSV--------------------- 457
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
AN + +Y R G ++ K+ ++ D+V+W+ +I++ +H G K+ L L+ M +
Sbjct: 458 ANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGV 517
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P++ T VS++S+C+ L L G +H +K + D +C L+DMY KCG +G +
Sbjct: 518 KPNSATLVSVISSCANLAALEHGELIHSHVKDVGL-ECDLSICTALVDMYMKCGQLGIAR 576
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
K+F+ M +R+V+TW +IS G++G A +AL+ F ME KP+ + +A+L+AC H G
Sbjct: 577 KMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAG 636
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
LV +G ELF RM Y +EP + HY C+VDLL + GHL+EAE +++ MP P+ IW T
Sbjct: 637 LVDKGRELFTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTL 695
Query: 648 LEGCQ 652
L C+
Sbjct: 696 LGACK 700
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 142/566 (25%), Positives = 257/566 (45%), Gaps = 57/566 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI----NRGFEPTQFTF-GGLLSCDSLNP 55
MP+R+VV++ ++IS G + L + M+ + G P T GL +C L
Sbjct: 171 MPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGE 230
Query: 56 VE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+ G L +K G+ + V ++L +Y + ++ +F ++P K LV+W S++
Sbjct: 231 LSVGTCLHGFGVKAGVGHCPSVV-SSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIG 289
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + G E + LF + S + E ++ GL N+ + G+ H +++ F
Sbjct: 290 AYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGD 349
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+L+ N+L++MY +C + A +F+ + RD SW++++ A ++ K LELY M
Sbjct: 350 SVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQ 409
Query: 235 VDIVFPNQTTFVYVINSCAG-------LQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
F ++ F Y NS L LG+S H IK+ + V +AL+ Y
Sbjct: 410 ----FRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMY 465
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFS 346
+C N + A F + K++V+W+ALI Y+ S ++ L ++L G +PN T
Sbjct: 466 GRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLV 525
Query: 347 HVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
V+ S L+ G L+ S+ K + L+ TAL
Sbjct: 526 SVISSCANLAALE----------------HGELIHSHVKDVGLECDLSICTAL------- 562
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
+Y + GQ K+ + D+V+WN++I+ +G+ + L+LF M
Sbjct: 563 -----VDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGN 617
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT----FVCNMLIDMYGKCGS 522
+ P++ TF+++LSAC C+ L L + E S + + C ++D+ GK G
Sbjct: 618 VKPNSLTFLAILSAC---CHAGLVDKGRELFTRMEEYSLEPNLKHYAC--MVDLLGKSGH 672
Query: 523 IGSSVKIFNEMT-DRNVITWTALISA 547
+ + + + M + + W L+ A
Sbjct: 673 LQEAEDVVSAMPIEPDGGIWGTLLGA 698
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 226/490 (46%), Gaps = 46/490 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
+P++++VS+ S+I AY R G+ E A+ +FL M G +P + LL+ + G
Sbjct: 276 LPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGG 335
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
A++++ F +G AL+ +Y + +D +VF + ++ +W+S+V + K
Sbjct: 336 KTFHAAIVRRN-FGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCK 394
Query: 119 HGFVEDCMFLFCELV---RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
G C+ L+ E+ + E +S + +I S L G+ H IK+
Sbjct: 395 AGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGEN 454
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
VAN+L++MY +C A K+F V+ +DVV+W+ +I + + + AL LY +M
Sbjct: 455 SSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLT 514
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ V PN T V VI+SCA L G+ IH+ V LECD+ + +ALVD Y KC L
Sbjct: 515 EGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGI 574
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLA 354
A F + +++V+WN +I GY L +++ G +PN TF +L +
Sbjct: 575 ARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSAC-- 632
Query: 355 FQLLQLHCLIIRMGYENY----EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
H ++ G E + EY L + YA
Sbjct: 633 -----CHAGLVDKGRELFTRMEEYSLEPNLKHYA-------------------------C 662
Query: 411 IAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ + ++G E ++S + PD W ++ AC + +++ L + K A+ P
Sbjct: 663 MVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASD--P 720
Query: 470 DNYTFVSLLS 479
+N + L+S
Sbjct: 721 ENDGYYILMS 730
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 118/272 (43%), Gaps = 16/272 (5%)
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
ALA + L+ PR A +++ Y+ G + PD WN ++ + D
Sbjct: 30 ALAVTSGLS-PRPDFAAKLVSA-YSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD--TFV 509
+ L + MRA+ P +T + SA ++L L +G+++H + ++ D V
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF----REME 565
+ L+ MY +CGS+ +V++F+EM +R+V+ WTA+IS NG L R
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV-DLLVRYGH 624
G +P+ + + L AC G + G L +GV+ + H VV L Y
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCL-----HGFGVKAGVGHCPSVVSSLFSMYTK 262
Query: 625 LKEAEKIITTMP-FPPNALIWRTFLEGCQRCR 655
E P P L+ T L G CR
Sbjct: 263 CDSTEDARILFPELPEKDLVSWTSLIGAY-CR 293
>gi|222622633|gb|EEE56765.1| hypothetical protein OsJ_06312 [Oryza sativa Japonica Group]
Length = 836
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 190/668 (28%), Positives = 341/668 (51%), Gaps = 20/668 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE---PTQFTFGGLLS-CDSLNPV 56
M + V N +I+A SR G D +F M+ G + PT T +L C L +
Sbjct: 20 MSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVL 79
Query: 57 E-GAQLQASVLKNGLFCADAFVGTALLGLYGRHG---CLDEVVSVFEDMPRKSLVTWNSI 112
G + V+K GL D G AL+ +Y + G +D+ F + K +V+WNSI
Sbjct: 80 RAGRSIHGYVIKTGLE-FDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSWNSI 138
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS-NEQDLEFGEQIHGLVIKNG 171
++ + ++G E+ + LF +++ E S+ V+ S E +G++IHG V+++G
Sbjct: 139 IAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHG 198
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
+ ++ V+N+L+ Y + + + E +F+ ++ D+V+WNT+I + +AL+L+
Sbjct: 199 LEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQ 258
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKC 290
+ + P+ + + ++ +CA + N +G +H + ++ L + + +ALV FY++C
Sbjct: 259 GLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQC 318
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF--LLIELLQLGYRPNEFTFSHV 348
D + A F I NK+ VSWNA++ A+ F LL E+ + + T ++
Sbjct: 319 DRFDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNI 378
Query: 349 LRSSL--AFQLLQ-LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+R S +++Q H +R+GY V +++ +YAK G + DA +L R +
Sbjct: 379 IRMSTFCGIKMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSL-AGRNI 437
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
V N + Y + + + + D+ +WN++ A N + LF +++
Sbjct: 438 VTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSE 497
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ PD + ++LSAC L ++ L HG + + + D + L+D Y KCG+I +
Sbjct: 498 GLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASL--EDIHLEGALLDAYSKCGNIAN 555
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ +F ++++ +TA+I A ++G A++A+E F +M L KPD V L A+L+AC H
Sbjct: 556 AYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSH 615
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM-PFPPNALIW 644
GLV G+++F+ + YGVEP +H C+VDLL R G L++A M P NA W
Sbjct: 616 AGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARSGRLQDAYSFALDMPPHVVNANAW 675
Query: 645 RTFLEGCQ 652
+ L C+
Sbjct: 676 GSLLGACK 683
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 134/544 (24%), Positives = 242/544 (44%), Gaps = 69/544 (12%)
Query: 82 LGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS---EVA 138
+ +YGR G L + +VF++M V N +++ + G D LF ++ S E
Sbjct: 1 MDMYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESM 60
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG---IWSA 195
T + V+ + + L G IHG VIK G +++ L N+LV+MY +C G + A
Sbjct: 61 PTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDA 120
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
F + +DVVSWN+II +E+ F +AL L+ +M + PN +T V+ C+ +
Sbjct: 121 HLAFSTICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLV 180
Query: 256 Q-NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
+ GK IH V+++ LE D+ V +AL+ Y+K + F +IV+WN +
Sbjct: 181 EYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTV 240
Query: 315 ILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE 373
I GY P+ L + LL G P+ + +L + L R+G +
Sbjct: 241 IAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNL-------RVGIRVHG 293
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
Y+ + L+ + T+L N + Y++ +++ + ++
Sbjct: 294 YI-------FRHPELLQE-----TSL--------MNALVSFYSQCDRFDAAFRSFITIQN 333
Query: 434 PDIVSWNIVIAACAHNGDY-KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
D VSWN +++ACA++ + ++ L M D+ T ++++ S C + +
Sbjct: 334 KDSVSWNAILSACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNIIRM-STFCGIKMVQE 392
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISA----- 547
HG + + D+ V N ++D Y KCG + + +F + RN++T +IS
Sbjct: 393 SHGYSLRVG-YTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNN 451
Query: 548 ------LGLNGFAQRALEK--------------------FREMEFLGFKPDRVALIAVLT 581
+ N A++ L F +++ G PD +++ +L+
Sbjct: 452 CVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILS 511
Query: 582 ACRH 585
AC H
Sbjct: 512 ACIH 515
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI---YPD 470
+Y R G + + ++ D V NI+I A + G Y +V LF+ M A+ + P
Sbjct: 3 MYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPT 62
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG---SIGSSV 527
T +L C+KL L G S+HG + KT + DT N L+ MY KCG ++ +
Sbjct: 63 AVTVAVVLPVCAKLRVLRAGRSIHGYVIKTG-LEFDTLSGNALVSMYAKCGGSIAMDDAH 121
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR--- 584
F+ + ++V++W ++I+ NG + AL F +M P+ L VL C
Sbjct: 122 LAFSTICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVE 181
Query: 585 ---------HGGLVREGMEL 595
HG +VR G+E+
Sbjct: 182 YGRHYGKEIHGFVVRHGLEM 201
>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
Length = 806
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 183/661 (27%), Positives = 337/661 (50%), Gaps = 42/661 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPV-EG 58
MPDR +N ++ + D L ++ M +P+ F +++C + + +G
Sbjct: 111 MPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQG 170
Query: 59 AQLQASVLK-NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+ V G+ ++ + +AL+ +Y + G +D ++ F+D WN+I+S
Sbjct: 171 RSIHYRVATGRGI---NSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALA 227
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + LF ++ + + ++ S + + L G QIH + +L
Sbjct: 228 GAGHHRRAIELFFQMEQHQC--SDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVL 285
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+L++MY +C + A ++F D+ R+VVSW ++I A+A+S ++ A++L+ M +
Sbjct: 286 VLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEG 345
Query: 238 VFPNQTTFVYVINSCAGL-QNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ PN+ T+ V+++ A L +++IL G+ IH+++ + ++ D V ++L++ YA+ L
Sbjct: 346 INPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLA 405
Query: 295 GAHLCFSEI--SNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRS 351
A F I ++K +VS+ +I YA P ++ + E+ G PNE TF+ VL +
Sbjct: 406 EAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAA 465
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+A L I +E ++ S + S SD A+ N +
Sbjct: 466 CVAIGDLASGAWI-------HERMIESGLDS-------SDPFAY-------------NSL 498
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y + G ++ ++ D+V+W +IAA +G+ + L+L+ M + I+PD
Sbjct: 499 VDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDI 558
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
T +LL AC+ L +LA+G +H ++++ D N L MY KCGS+ + +++
Sbjct: 559 ATLSTLLVACANLGDLAMGEKIHRQALRSKL-EQDAHFQNALAAMYAKCGSLEKATRLYR 617
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+V TWT++++A G A ALE + EME G +P+ V I VL +C GLV E
Sbjct: 618 RCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAE 677
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G E F + YG +P +H+ C+VD+L R G L++AE+++ +MPF P+ + W++ L C
Sbjct: 678 GREFFHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSC 737
Query: 652 Q 652
+
Sbjct: 738 K 738
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/582 (25%), Positives = 275/582 (47%), Gaps = 43/582 (7%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ A ++ L +A +G + +Y R C D +++F+ MP + WN ++ F
Sbjct: 69 GRRVHAHIVSRRL-ARNALLGELVFQMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFL 127
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
D + L+ + + F+ I +DL G IH + G
Sbjct: 128 AADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSIH-YRVATGRGINSS 186
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ ++LV MY QC I A F D WN I+ ALA + + +A+EL+ +M
Sbjct: 187 IQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFFQMEQHQ 246
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ + + +CA + G IH K+ V V +AL+ Y +C L+ A
Sbjct: 247 C--SDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEAL 304
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTF-------SHVL 349
F+++ ++N+VSW ++I A + ++ L ++ G PNE T+ +H+
Sbjct: 305 RVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGINPNEKTYASVVSAIAHLG 364
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
R ++ + ++H I G + V SL+ YA+SGL+++A
Sbjct: 365 RDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEARE--------------- 409
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+++ + ++TV VS+ +IAA AHNG ++ LE+F+ M A + P
Sbjct: 410 ----VFDSILENSKTV-----------VSFTTMIAAYAHNGHPRQALEIFREMTARGVAP 454
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ TF ++L+AC + +LA G+ +H + ++ + SSD F N L+DMY KCG +G + ++
Sbjct: 455 NEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARV 514
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F M ++++ WT +I+A +G + AL+ + M G PD L +L AC + G +
Sbjct: 515 FETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDL 574
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
G ++ + RS +E + + + + + G L++A ++
Sbjct: 575 AMGEKIHRQALRS-KLEQDAHFQNALAAMYAKCGSLEKATRL 615
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/532 (24%), Positives = 233/532 (43%), Gaps = 48/532 (9%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
+ ++ N++ L+ G ++H ++ L+ + MY +C +A +F +
Sbjct: 53 YANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMP 112
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
R WN ++ ++ LELY RMSV+ P+ F++ I +C +++ G+S
Sbjct: 113 DRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRS 172
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL---ILGYAS 320
IH +V + + SALV YA+C ++ A F + WNA+ + G
Sbjct: 173 IHYRV-ATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGH 231
Query: 321 KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM 380
+F +E Q R + +Q+H I + VL +L+
Sbjct: 232 HRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALI 291
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
+ +Y R G+ +E +++ + + ++VSW
Sbjct: 292 S--------------------------------MYVRCGKLDEALRVFADMPHRNVVSWT 319
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL---GSSLHGLI 497
+IAA A +G Y ++LF M A I P+ T+ S++SA + L A+ G +H I
Sbjct: 320 SMIAAVAQSGHYSFAVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQI 379
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD--RNVITWTALISALGLNGFAQ 555
+ I +D V N LI+MY + G + + ++F+ + + + V+++T +I+A NG +
Sbjct: 380 TASG-IDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIAAYAHNGHPR 438
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
+ALE FREM G P+ + VL AC G + G + ERM S + Y+ +
Sbjct: 439 QALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSL 498
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL-----EGCQRCRIAKYDTL 662
VD+ + G L A ++ TM + + W T + G R + YD +
Sbjct: 499 VDMYAKCGDLGFAARVFETMK-TKDLVAWTTIIAANVQSGNNRAALDLYDRM 549
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 188/660 (28%), Positives = 325/660 (49%), Gaps = 44/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEG-- 58
MP R+VV++ +++SA + G ALR+F M G P F L ++ G
Sbjct: 121 MPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFT 180
Query: 59 AQLQASVLK-NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ A +K GLF D +V ++L+ Y G +D D P +S V+WN++++ +
Sbjct: 181 PQVHAQAVKLEGLF--DPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYA 238
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G M +F +LV S +++ + V+ + G+ +HGLVIK G + + +
Sbjct: 239 RDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRV 298
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ N L+ MY +C A ++F ++ DVV + +I + +A +++++MS
Sbjct: 299 LNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMG 358
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PNQ TFV + + + L +SIHA ++K+ V A+V Y K ++ A
Sbjct: 359 VKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAI 418
Query: 298 LCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
L F + +I SWN L+ G Y+ + + + EL+ G N++T+ +LR +
Sbjct: 419 LAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLM 478
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L Q+H +++ G++ V L+ Y ++G ++A
Sbjct: 479 DLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARL------------------ 520
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+++R L+ D+ SW +V++ A + ++ +E F+ M P++
Sbjct: 521 -VFDR-------------LKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDA 566
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T + LS CS L L G LH K+ SS V + L+DMY KCG++ + +F+E
Sbjct: 567 TLATSLSVCSDLACLGSGLQLHSYTIKSGWNSS--VVSSALVDMYVKCGNLADAEMLFDE 624
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+++ W +I +G +ALE F+EM G PD + + VL+AC H GL+ EG
Sbjct: 625 SDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEG 684
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+ ++ YG+ P ++HY C+VD+L + G L EAE +I MP P+A +W+T L C+
Sbjct: 685 RRYFKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACR 744
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 143/581 (24%), Positives = 268/581 (46%), Gaps = 49/581 (8%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G L A +L++G DAF+ +LL +Y + G L + SVF+ MP + +V W ++VS
Sbjct: 79 GKALHARLLRSGPR-PDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAIT 137
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + LF E+ V + + + DL F Q+H +K ++
Sbjct: 138 AAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPY 197
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V++SLV Y C + AE+ D +R VSWN ++ A ++ K + ++ ++
Sbjct: 198 VSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESG 257
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
++ T V+ C L + G+++H VIK LE D + + L++ Y+KC + E A+
Sbjct: 258 DEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAY 317
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----RSS 352
F+ I ++V + +I + +P + + +++ +G +PN++TF + R+
Sbjct: 318 EVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTG 377
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANII 411
+H I++ G+ + V +++ Y K+G + DA LAF
Sbjct: 378 DVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAF---------------- 421
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++ PDI SWN +++ + + L +FK + + +
Sbjct: 422 -----------------DLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANK 464
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
YT+V +L C+ L +L G +H + K+ D V ML+DMY + G ++ +F+
Sbjct: 465 YTYVGILRCCTSLMDLRFGCQVHACVLKSG-FQGDYDVSKMLLDMYVQAGCFTNARLVFD 523
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ +R+V +WT ++S ++A+E FR M +P+ L L+ C +
Sbjct: 524 RLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGS 583
Query: 592 GMELFERMNRSYGVEPEMDH---YHCVVDLLVRYGHLKEAE 629
G++L SY ++ + +VD+ V+ G+L +AE
Sbjct: 584 GLQL-----HSYTIKSGWNSSVVSSALVDMYVKCGNLADAE 619
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 225/487 (46%), Gaps = 51/487 (10%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGL--LSCDSLNPVEGAQLQ 62
+VV + +IS + R +A +F+ M + G +P Q+TF GL ++ + + +
Sbjct: 327 DVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIH 386
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
A ++K+G F V A++G+Y + G + + + F+ M + +WN+++S F
Sbjct: 387 AHIVKSG-FSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNC 445
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
E + +F EL+ V + ++VG++ ++ DL FG Q+H V+K+GF + V+ L
Sbjct: 446 EHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKML 505
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
++MY Q +A +F ++ RDV SW ++ A+++ KA+E + M + PN
Sbjct: 506 LDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPND 565
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T ++ C+ L G +H+ IK+ V V SALVD Y KC NL A + F E
Sbjct: 566 ATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSV-VSSALVDMYVKCGNLADAEMLFDE 624
Query: 303 ISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
++V WN +I GYA ++ E++ G P+E TF VL
Sbjct: 625 SDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVL------------ 672
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNR 417
++ + +GL+ + + L+ + P + I +
Sbjct: 673 -------------------SACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVDILAK 713
Query: 418 TGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA----RIYPDNY 472
G+ E L++++ PD W ++ AC +G+ E+ E RAA PD+
Sbjct: 714 AGKLAEAESLINEMPLTPDASLWKTILGACRMHGNI-EIAE-----RAAEKLFESQPDDI 767
Query: 473 TFVSLLS 479
+ LLS
Sbjct: 768 SSCILLS 774
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/482 (23%), Positives = 218/482 (45%), Gaps = 31/482 (6%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
S+ + G + + L G+ +H ++++G + + +SL+NMY +C + A +F +
Sbjct: 62 SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
RDVV+W ++ A+ + + G AL L+ MS + V PN + +C +
Sbjct: 122 PHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTP 181
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
+HA+ +K D +V S+LV+ Y C ++ A + ++ VSWNAL+ YA
Sbjct: 182 QVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDG 241
Query: 323 SPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMT 381
+ L+ + L++ G +++T VL+ + L
Sbjct: 242 DYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGL------------------------ 277
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
AKSG L L R V N + +Y++ + ++ ++++ PD+V ++
Sbjct: 278 --AKSGQAVHGLVIKRGLETDR--VLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSL 333
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I+ + E ++F M + P+ YTFV L S+ ++ L S+H I K+
Sbjct: 334 MISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSG 393
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
S VC+ ++ MY K G++ ++ F+ M ++ +W L+S + L F
Sbjct: 394 -FSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIF 452
Query: 562 REMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR 621
+E+ G ++ + +L C +R G ++ + +S G + + D ++D+ V+
Sbjct: 453 KELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKS-GFQGDYDVSKMLLDMYVQ 511
Query: 622 YG 623
G
Sbjct: 512 AG 513
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 137/325 (42%), Gaps = 41/325 (12%)
Query: 319 ASKSSPTSIFLLIELLQLGYRPNEF-TFSHVLRSSLAFQLLQ----LHCLIIRMGYENYE 373
A S+P+ E L+L R E +++ L+ A + L+ LH ++R G
Sbjct: 38 AHPSAPSPSPRDDERLRL--RAEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDA 95
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
++ SL+ Y K G ++DA ++ G+ +R
Sbjct: 96 FLHDSLLNMYCKCGRLADA---------------RSVFDGMPHR---------------- 124
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
D+V+W +++A GD L LF M + P+ + + L AC+ +L +
Sbjct: 125 -DVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQV 183
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H K E + D +V + L++ Y CG + + + + R+ ++W AL++ +G
Sbjct: 184 HAQAVKLEGL-FDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGD 242
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
+ + F ++ G + + L VL C GL + G + + + G+E + +
Sbjct: 243 YAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKR-GLETDRVLNN 301
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFP 638
C++++ + ++A ++ + P
Sbjct: 302 CLIEMYSKCLSAEDAYEVFARIDEP 326
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 200/628 (31%), Positives = 313/628 (49%), Gaps = 70/628 (11%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ A ++K G F D +G + ++G L + +FE MP K+ V+ N ++S + K G
Sbjct: 39 IDARIVKTG-FDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSG 97
Query: 121 FVEDCMFLFCELV-RSEVAL---------------------------TESSFVGVIHGLS 152
+ + LF +V R+ V TE +V + LS
Sbjct: 98 NLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLS 157
Query: 153 NEQDLEFGEQIHGL---VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
E G QI + +IK G+D L+V N+LV+ Y + + A ++FK++ D VS
Sbjct: 158 GCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVS 217
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
+N +I ++ KA+ L++ M + P + TF V+ + GL + +LG+ IH+ VI
Sbjct: 218 YNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVI 277
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFL 329
K +VFV +AL+DFY+K D++ A F E+ ++ VS+N +I GYA F
Sbjct: 278 KTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFD 337
Query: 330 LIELLQL-GYRPNEFTFSHVL---RSSLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYA 384
L LQ + +F F+ +L ++L +++ Q+H I ++ V SL+ YA
Sbjct: 338 LFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYA 397
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
K G +A T L R+ VP + Y + G Y E
Sbjct: 398 KCGKFEEAEMIFTNLT-HRSAVPWTAMISAYVQKGFYEEG-------------------- 436
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
L+LF MR A + D TF SLL A + + +L+LG LH I K+ +
Sbjct: 437 -----------LQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFM- 484
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
S+ F + L+D+Y KCGSI +V+ F EM DRN+++W A+ISA NG A+ L+ F+EM
Sbjct: 485 SNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEM 544
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
G +PD V+ + VL+AC H GLV EG+ F M + Y ++P +HY VVD+L R G
Sbjct: 545 VLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGR 604
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEGCQ 652
EAEK++ MP P+ ++W + L C+
Sbjct: 605 FNEAEKLMAEMPIDPDEIMWSSVLNACR 632
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 159/585 (27%), Positives = 283/585 (48%), Gaps = 58/585 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLN-PVEG 58
M +R V++ +I YS+ ++A +F+ M G EP TF LLS C+ +
Sbjct: 109 MVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQI 168
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+Q ++K G + + VG L+ Y + LD +F++MP V++N++++ + K
Sbjct: 169 TQVQTQIIKLG-YDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSK 227
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E + LF E+ S + TE +F V+ D+ G+QIH VIK F + + V
Sbjct: 228 DGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFV 287
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N+L++ Y + + A K+F ++ +D VS+N II A A +L+ +
Sbjct: 288 SNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAF 347
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
Q F +++ + + +G+ IHA+ I + ++ VG++LVD YAKC E A +
Sbjct: 348 DRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEM 407
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+ +++++ V W A+I Y K + L ++ Q ++ TF+ +LR+S +
Sbjct: 408 IFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIAS 467
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L QLH II+ G+ + + +L+ YAK G I DA
Sbjct: 468 LSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDA--------------------- 506
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
V+ ++ +IVSWN +I+A A NG+ + L+ FK M + + PD+ +
Sbjct: 507 -----------VQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVS 555
Query: 474 FVSLLSACSK-------LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
F+ +LSACS L + + ++ L + E +S ++DM + G +
Sbjct: 556 FLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYAS-------VVDMLCRSGRFNEA 608
Query: 527 VKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFL 567
K+ EM D + I W+++++A ++ A+RA ++ ME L
Sbjct: 609 EKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEEL 653
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 174/409 (42%), Gaps = 70/409 (17%)
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS------------ 310
+I A+++K + D + V + K L A F ++ +KN VS
Sbjct: 38 NIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSG 97
Query: 311 -------------------WNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLR 350
W LI GY+ + F L +++ + G P+ TF +L
Sbjct: 98 NLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLS 157
Query: 351 S----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+ Q+ Q+ II++GY++ V +L+ SY KS + A
Sbjct: 158 GCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLA-------------- 203
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
+L ++ D VS+N +I + +G ++ + LF M+ +
Sbjct: 204 ------------------CQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSG 245
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
+ P +TF ++L A L ++ LG +H + KT + + FV N L+D Y K S+ +
Sbjct: 246 LKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFV-WNVFVSNALLDFYSKHDSVIDA 304
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
K+F+EM +++ +++ +IS +G + A + FRE++F F + +L+ +
Sbjct: 305 RKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNT 364
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
G ++ + + + E+ + +VD+ + G +EAE I T +
Sbjct: 365 LDWEMGRQIHAQTIVTTA-DSEILVGNSLVDMYAKCGKFEEAEMIFTNL 412
>gi|255591025|ref|XP_002535423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223523164|gb|EEF26960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 563
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 177/598 (29%), Positives = 308/598 (51%), Gaps = 41/598 (6%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVL 66
+NS+I A + G AL ++ M + +P +TF ++ +C +L E G +Q VL
Sbjct: 1 WNSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVL 60
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
+ G F D ++G AL+ +Y R G L + +VFE+M + +V+WNS++S + +G+ ++ +
Sbjct: 61 EIG-FGFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEAL 119
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
++ EL + + + V+ ++ GE IHGLV K G + +++++N L++MY
Sbjct: 120 EIYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMSNGLLSMY 179
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
F+ + A+++F + ++D VSWNT+I + E F ++++L+ M V P+ T
Sbjct: 180 FKFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREM-VKRFRPDLLTIT 238
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
V+ +C L++ GK +H ++++ +E DV + ++D YAKC +L + F I +
Sbjct: 239 SVLRACGLLRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDRIKCR 298
Query: 307 NIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HC 362
+ VSWN LI GY S L + +++ +P+ TF +L S +L HC
Sbjct: 299 DSVSWNTLINGYIQSRSYGEGVKLFKKMKMDLKPDSITFVTLLSISTRLADTELGKEIHC 358
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
+ ++G+++ V +L+ Y+K G + D+L
Sbjct: 359 DLAKLGFDSDLVVSNALVDMYSKCGNVKDSL----------------------------- 389
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
K+ ++ DIV+WN +IAAC D + MR + PD T + +L CS
Sbjct: 390 ---KVFENMKVRDIVTWNTIIAACVQAEDCTLAFRMISQMRNEELIPDMGTLLGILPICS 446
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
+ G +H K S V N LI+MY KC ++ +++F +M ++V+TWT
Sbjct: 447 LIAAKRQGKEVHACTFKFG-FESTVPVGNALIEMYSKCSNLKYCIRVFEDMKTKDVVTWT 505
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
AL+SA G+ G ++AL F EME G PD +A +A++ AC H G V EG+ F+ M
Sbjct: 506 ALVSAYGMYGEGKKALRAFAEMEEAGIIPDHIAFVAIIYACSHSGSVEEGLACFDHMK 563
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 245/492 (49%), Gaps = 48/492 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
M R++VS+NS+IS YS GY ++AL ++ + G +P FT +L +C L V EG
Sbjct: 94 MTHRDIVSWNSLISGYSANGYWDEALEIYYELRIAGLKPDNFTLSSVLPACGGLLAVKEG 153
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V K G+ D + LL +Y + G L + VF M K V+WN+++ + +
Sbjct: 154 EVIHGLVEKLGM-NIDVIMSNGLLSMYFKFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQ 212
Query: 119 HGFVEDCMFLFCELVR--SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
E+ + LF E+V+ LT +S V+ +DLEFG+ +H ++++G ++++
Sbjct: 213 MELFEESIQLFREMVKRFRPDLLTITS---VLRACGLLRDLEFGKFVHDYILRSGIEFDV 269
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+N +++ Y +C + ++ K F ++ RD VSWNT+I +S ++G+ ++L+ +M +D
Sbjct: 270 TASNIVIDTYAKCGDLLASRKAFDRIKCRDSVSWNTLINGYIQSRSYGEGVKLFKKMKMD 329
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ P+ TFV +++ L ++ LGK IH + K + D+ V +ALVD Y+KC N++ +
Sbjct: 330 LK-PDSITFVTLLSISTRLADTELGKEIHCDLAKLGFDSDLVVSNALVDMYSKCGNVKDS 388
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLR----S 351
F + ++IV+WN +I T F +I ++ P+ T +L
Sbjct: 389 LKVFENMKVRDIVTWNTIIAACVQAEDCTLAFRMISQMRNEELIPDMGTLLGILPICSLI 448
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP-ANI 410
+ Q ++H + G+E + VP N
Sbjct: 449 AAKRQGKEVHACTFKFGFE---------------------------------STVPVGNA 475
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ +Y++ +++ ++ D+V+W +++A G+ K+ L F M A I PD
Sbjct: 476 LIEMYSKCSNLKYCIRVFEDMKTKDVVTWTALVSAYGMYGEGKKALRAFAEMEEAGIIPD 535
Query: 471 NYTFVSLLSACS 482
+ FV+++ ACS
Sbjct: 536 HIAFVAIIYACS 547
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 120/217 (55%), Gaps = 8/217 (3%)
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
WN VI A HNG + + L+L+ M+ + PD YTF S+++AC+ L + +G+ + +
Sbjct: 1 WNSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVL 60
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
+ D ++ N L+DMY + G + + +F EMT R++++W +LIS NG+ AL
Sbjct: 61 EIGF-GFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEAL 119
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGL--VREGMELFERMNRSYGVEPEMDHYHCVV 616
E + E+ G KPD L +VL AC GGL V+EG E+ + G+ ++ + ++
Sbjct: 120 EIYYELRIAGLKPDNFTLSSVLPAC--GGLLAVKEG-EVIHGLVEKLGMNIDVIMSNGLL 176
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG-CQ 652
+ ++G L +A+++ M + + W T + G CQ
Sbjct: 177 SMYFKFGRLMDAQRVFNKM-VVKDYVSWNTLICGYCQ 212
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 162/355 (45%), Gaps = 51/355 (14%)
Query: 311 WNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF------QLLQLHCL 363
WN++I ++ L ++ +P+ +TF V+ + A ++Q H L
Sbjct: 1 WNSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVL 60
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
I G++ Y N + +Y R G +
Sbjct: 61 EIGFGFDLY----------------------------------IGNALVDMYARFGDLVK 86
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
+ ++ DIVSWN +I+ + NG + E LE++ +R A + PDN+T S+L AC
Sbjct: 87 ARNVFEEMTHRDIVSWNSLISGYSANGYWDEALEIYYELRIAGLKPDNFTLSSVLPACGG 146
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
L + G +HGL++K + + D + N L+ MY K G + + ++FN+M ++ ++W
Sbjct: 147 LLAVKEGEVIHGLVEKLGM-NIDVIMSNGLLSMYFKFGRLMDAQRVFNKMVVKDYVSWNT 205
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE---GMELFERMN 600
LI + +++ FREM F+PD + + +VL AC GL+R+ G + + +
Sbjct: 206 LICGYCQMELFEESIQLFREM-VKRFRPDLLTITSVLRAC---GLLRDLEFGKFVHDYIL 261
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
RS G+E ++ + V+D + G L + K + +++ W T + G + R
Sbjct: 262 RS-GIEFDVTASNIVIDTYAKCGDLLASRKAFDRIK-CRDSVSWNTLINGYIQSR 314
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 9/165 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVED---ALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV- 56
M R++V++N+II+A C ED A RM M N P T G+L SL
Sbjct: 395 MKVRDIVTWNTIIAA---CVQAEDCTLAFRMISQMRNEELIPDMGTLLGILPICSLIAAK 451
Query: 57 -EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
+G ++ A K G F + VG AL+ +Y + L + VFEDM K +VTW ++VS
Sbjct: 452 RQGKEVHACTFKFG-FESTVPVGNALIEMYSKCSNLKYCIRVFEDMKTKDVVTWTALVSA 510
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
+G +G + + F E+ + + +FV +I+ S+ +E G
Sbjct: 511 YGMYGEGKKALRAFAEMEEAGIIPDHIAFVAIIYACSHSGSVEEG 555
>gi|413932453|gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 913
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 174/570 (30%), Positives = 293/570 (51%), Gaps = 43/570 (7%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
+ G L + + +F+ MPRK++V W + +S ++G E +F +++ S VA + +
Sbjct: 82 KSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNA 141
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
+ + L GEQ+H L ++ GF + + + L+ +Y +C + +AE++F+ +E D
Sbjct: 142 ALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPD 201
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
VV + +++ AL + +A+++ +M+ + PN+ T ++ C +G+ IH
Sbjct: 202 VVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP----RGIGEQIHG 257
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI-LGYASKSSPT 325
++K V+ +AL+DFY++ + A F + +KN+VSW +++ L
Sbjct: 258 YMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDD 317
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYA 384
++ + E++ G +PNEF FS L + + L Q+HC I
Sbjct: 318 ALRVFSEMISEGVQPNEFAFSIALSACGSVCLGRQIHCSAI------------------- 358
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
K L++D + +N + +Y R+G +E +L ++E PD+VSW I+
Sbjct: 359 KRDLMTD-------------IRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAIS 405
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
A NG ++ + L M + P++Y F S LS+C+ L L G LH L K +
Sbjct: 406 ANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALK---LG 462
Query: 505 SDTFVC--NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
D VC N LI+MY KCG IGS+ F+ M +V++W +LI L +G A ALE F
Sbjct: 463 CDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFS 522
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
EM ++PD ++VL C H GLV+EG F +M YG+ P HY C++D+L R
Sbjct: 523 EMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRN 582
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G EA ++I MPF P+ LIW+T L C+
Sbjct: 583 GRFAEALRMIENMPFEPDVLIWKTLLASCK 612
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 170/623 (27%), Positives = 280/623 (44%), Gaps = 100/623 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGA- 59
MP +NVV++ + IS +R G E A MF M+ G P F L+ + G
Sbjct: 96 MPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAAAGALGLG 155
Query: 60 -QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + ++ G F ADA++G+ L+ LY R G L VF M +V + S+VS +
Sbjct: 156 EQVHSLAVRAG-FAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCR 214
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + + C++ R + E + ++ E GEQIHG ++K +
Sbjct: 215 NGELARAVDVLCQMTRQGLQPNEHTMTSML----AECPRGIGEQIHGYMLKVMGSQSVYA 270
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ +L++ Y + +A+ +F+++E ++VVSW +++ AL ++ M + V
Sbjct: 271 STALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGV 330
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+ F +++C + LG+ IH IK L D+ V +AL+ Y + +
Sbjct: 331 QPNEFAFSIALSACGSV---CLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEA 387
Query: 299 CFSEISNKNIVSWNALI-LGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS----SL 353
+I N ++VSW A I + + S ++ LL+++ G+ PN++ FS L S +L
Sbjct: 388 VLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLAL 447
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIA 412
Q QLHCL +++G + +L+ Y+K G I A LAF
Sbjct: 448 LHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDV--------------- 492
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
++ D++SWN +I A +GD LE F M ++ PD+
Sbjct: 493 ------------------MDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDS 534
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF+S+L C+ GL+K+ E TF F +
Sbjct: 535 TFLSVLVGCNHA----------GLVKEGE-----TF---------------------FRQ 558
Query: 533 MTDRNVITWTA-----LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-H- 585
MTDR +T T +I LG NG R E R +E + F+PD + +L +C+ H
Sbjct: 559 MTDRYGLTPTPSHYACMIDMLGRNG---RFAEALRMIENMPFEPDVLIWKTLLASCKLHR 615
Query: 586 ----GGLVREG-MELFERMNRSY 603
G L + MEL ER + SY
Sbjct: 616 NLDIGKLAADKLMELSERDSASY 638
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 131/313 (41%), Gaps = 42/313 (13%)
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELL 334
DV + +D K L A F + KN+V+W I G P + + ++L
Sbjct: 69 DVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADML 128
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
+ G PN+F + L + A L Q+H L +R G+ ++ L+
Sbjct: 129 ESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIE--------- 179
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
+Y+R G ++ ++E PD+V + +++A NG
Sbjct: 180 -----------------------LYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNG 216
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
+ +++ M + P+ +T S+L+ C + +G +HG + K + S +
Sbjct: 217 ELARAVDVLCQMTRQGLQPNEHTMTSMLAECPR----GIGEQIHGYMLKV-MGSQSVYAS 271
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
LID Y + G G++ +F + +NV++W +++ +G AL F EM G +
Sbjct: 272 TALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQ 331
Query: 571 PDRVALIAVLTAC 583
P+ A L+AC
Sbjct: 332 PNEFAFSIALSAC 344
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 64/181 (35%), Gaps = 49/181 (27%)
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+D K G +G ++ +F+ M +NV+ WT IS NG + A F +M G P+
Sbjct: 77 LDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPND 136
Query: 574 VA--------------------------------------LIAVLTACRHGGLVREGMEL 595
A LI + + C G +R E+
Sbjct: 137 FACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRC---GSLRAAEEV 193
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP---FPPNALIWRTFLEGCQ 652
F RM P++ Y +V L R G L A ++ M PN + L C
Sbjct: 194 FRRME-----APDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP 248
Query: 653 R 653
R
Sbjct: 249 R 249
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 195/614 (31%), Positives = 304/614 (49%), Gaps = 52/614 (8%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G L A +L G F + + +L+ LY + + VF+ + K +V+WN +++ F
Sbjct: 28 KGRALHARILVTGSFSSTQ-IANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINAF 86
Query: 117 GK---HGFVEDCMFLFCELVRSEVALTES--SFVGVIHGLSNEQDLEFGEQIHGLVIKNG 171
+ H M LF +LV + + + + GV S D G Q H L +K
Sbjct: 87 SQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTA 146
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
+++ A+SL+NMY + ++ A +F ++ R+ VSW T+I A E +A EL+
Sbjct: 147 CSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFK 206
Query: 232 RMSVDIVFPNQTTFVY--VIN--SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
M + N+ FV+ V++ +C L N+ G+ +H+ +KN L C V V +ALV Y
Sbjct: 207 LMRHEEKGKNENEFVFTSVLSALTCYMLVNT--GRQVHSLAMKNGLVCIVSVANALVTMY 264
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFS 346
KC +LE A F NKN ++W+A++ G+A S ++ L ++ Q G P+EFT
Sbjct: 265 VKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLV 324
Query: 347 HVLRS-SLAFQLL---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
V+ + S A ++ Q+H +++GYE YVL +L+ YAK G I DA
Sbjct: 325 GVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDA---------- 374
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
R G +++PD+V W +I NGDY+ L L+ M
Sbjct: 375 --------------RKG--------FECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKM 412
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLH-GLIKKTEIISSDTFVCNMLIDMYGKCG 521
+ + P++ T S+L ACS L L G +H G+IK S + + + L MY KCG
Sbjct: 413 QLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYN--FSLEIPIGSALSAMYAKCG 470
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
S+ +IF M R+VI+W A+IS L NG LE F +M G KPD V + +L+
Sbjct: 471 SLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLS 530
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC H GLV G F+ M + + P ++HY C+VD+L R G L EA++ I +
Sbjct: 531 ACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGL 590
Query: 642 LIWRTFLEGCQRCR 655
+WR L + R
Sbjct: 591 CLWRILLAASKNHR 604
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 151/561 (26%), Positives = 266/561 (47%), Gaps = 50/561 (8%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMF-----LYMINRGFEPTQFTFGGLLSCDSLNPVE 57
+++VVS+N +I+A+S+ +L + L M ++ P T G+ + S
Sbjct: 73 NKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDS 132
Query: 58 GAQLQASVLKNGLFCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
A QA L C+ D F ++LL +Y + G + E +F++MP ++ V+W +++S +
Sbjct: 133 RAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGY 192
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFV--GVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
++ LF + E E+ FV V+ L+ + G Q+H L +KNG
Sbjct: 193 ASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVC 252
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ VAN+LV MY +C + A K F+ ++ ++W+ ++ A+ + KAL+L+ M
Sbjct: 253 IVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMH 312
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
P++ T V VIN+C+ + G+ +H +K E ++V SALVD YAKC ++
Sbjct: 313 QSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIV 372
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLR--S 351
A F I ++V W ++I GY L +QL G PN+ T + VL+ S
Sbjct: 373 DARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACS 432
Query: 352 SLAF--QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+LA Q Q+H II+ + +L IP +
Sbjct: 433 NLAALDQGKQMHAGIIKYNF----------------------------SLEIP----IGS 460
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
++ +Y + G ++ ++ ++ D++SWN +I+ + NG E LELF+ M P
Sbjct: 461 ALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKP 520
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSV 527
DN TFV+LLSACS + + G ++ I+ + + C ++D+ + G + +
Sbjct: 521 DNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYAC--MVDILSRAGKLHEAK 578
Query: 528 KIFNEMT-DRNVITWTALISA 547
+ T D + W L++A
Sbjct: 579 EFIESATVDHGLCLWRILLAA 599
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 233/511 (45%), Gaps = 47/511 (9%)
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
+ + L G +H ++ G +ANSL+N+Y +C+ A +F + +DVVSWN
Sbjct: 21 TRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWN 80
Query: 212 TIIGALAESENFGKALEL-----YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
+I A ++ + +L + L M+ + PN T V + + L +S G+ HA
Sbjct: 81 CLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHA 140
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS 326
+K A DVF S+L++ Y K + A F E+ +N VSW +I GYAS+
Sbjct: 141 LAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADE 200
Query: 327 IFLLIELL---QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSL 379
F L +L+ + G NEF F+ VL + + L+ Q+H L ++ G V +L
Sbjct: 201 AFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANAL 260
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+T Y K G + DAL + +G N ++W
Sbjct: 261 VTMYVKCGSLEDALK-------------------TFELSGNKNS-------------ITW 288
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+ ++ A GD + L+LF M + P +T V +++ACS C + G +HG K
Sbjct: 289 SAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLK 348
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+V + L+DMY KCGSI + K F + +V+ WT++I+ NG + AL
Sbjct: 349 LG-YELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALN 407
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
+ +M+ G P+ + + +VL AC + + +G ++ + + Y E+ + +
Sbjct: 408 LYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIK-YNFSLEIPIGSALSAMY 466
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ G L + +I MP + + W + G
Sbjct: 467 AKCGSLDDGYRIFWRMP-ARDVISWNAMISG 496
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 229/458 (50%), Gaps = 34/458 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMIN--RGFEPTQFTFGGLLSCDSLNPV-- 56
MP+RN VS+ ++IS Y+ ++A +F M + +G +F F +LS + +
Sbjct: 177 MPERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVN 236
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G Q+ + +KNGL C + V AL+ +Y + G L++ + FE K+ +TW+++V+ F
Sbjct: 237 TGRQVHSLAMKNGLVCIVS-VANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGF 295
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ G + + LF ++ +S +E + VGVI+ S+ + G Q+HG +K G++ +L
Sbjct: 296 AQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQL 355
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V ++LV+MY +C I A K F+ ++ DVV W +II ++ ++ AL LY +M +
Sbjct: 356 YVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLG 415
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN T V+ +C+ L GK +HA +IK ++ +GSAL YAKC +L+
Sbjct: 416 GVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDG 475
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF 355
+ F + ++++SWNA+I G + L E + L G +P+ TF ++L +
Sbjct: 476 YRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHM 535
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L+ + +M ++ + NI V + I
Sbjct: 536 GLVDRGWVYFKMMFDEF---------------------------NIAPTVEHYACMVDIL 568
Query: 416 NRTGQYNETVKLL-SQLERPDIVSWNIVIAACAHNGDY 452
+R G+ +E + + S + W I++AA ++ DY
Sbjct: 569 SRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDY 606
>gi|218190515|gb|EEC72942.1| hypothetical protein OsI_06806 [Oryza sativa Indica Group]
Length = 1030
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 189/664 (28%), Positives = 340/664 (51%), Gaps = 20/664 (3%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE---PTQFTFGGLLS-CDSLNPVE-GA 59
+ V N +I+A SR G D +F M+ G + PT T +L C L + G
Sbjct: 159 DAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGR 218
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHG---CLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ V+K GL D G AL+ +Y + G +D+ F + K +V+WNSI++ +
Sbjct: 219 SIHGYVIKTGLE-FDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSWNSIIAGY 277
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS-NEQDLEFGEQIHGLVIKNGFDYE 175
++G E+ + LF +++ E S+ V+ S E +G++IHG V+++G + +
Sbjct: 278 SENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMD 337
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V+N+L+ Y + + + E +F+ ++ D+V+WNT+I + +AL+L+ +
Sbjct: 338 ISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLF 397
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLE 294
+ P+ + + ++ +CA + N +G +H + ++ L + + +ALV FY++CD +
Sbjct: 398 AGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFD 457
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIF--LLIELLQLGYRPNEFTFSHVLRSS 352
A F I NK+ VSWNA++ A+ F LL E+ + + T +++R S
Sbjct: 458 AAFRSFITIQNKDSVSWNAILSACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNIIRMS 517
Query: 353 L--AFQLLQ-LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+++Q H +R+GY V +++ +YAK G + DA +L R +V N
Sbjct: 518 TFCGIKMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSL-AGRNIVTGN 576
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ Y + + + + D+ +WN++ A N + LF +++ + P
Sbjct: 577 TMISCYLKNNCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEGLNP 636
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D + ++LSAC L ++ L HG + + + D + L+D Y KCG+I ++ +
Sbjct: 637 DTISITNILSACIHLSSVQLVKQCHGYMLRASL--EDIHLEGALLDAYSKCGNIANAYNL 694
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F ++++ +TA+I A ++G A++A+E F +M L KPD V L A+L+AC H GLV
Sbjct: 695 FQVSLHKDLVIFTAMIGAYAMHGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSHAGLV 754
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM-PFPPNALIWRTFL 648
G+++F+ + YGVEP +H C+VDLL R G L++A M P NA W + L
Sbjct: 755 DAGIKIFKSIREIYGVEPTEEHCACMVDLLARSGRLQDAYSFALDMPPHVVNANAWGSLL 814
Query: 649 EGCQ 652
C+
Sbjct: 815 GACK 818
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 147/604 (24%), Positives = 263/604 (43%), Gaps = 76/604 (12%)
Query: 28 MFLYMINRGFEPTQFTFGGLLSCDSLNP------VEGAQLQASVLKNGLFCADAFVGTAL 81
+ +M+ RG P + + S P G L +K G + A V A+
Sbjct: 77 LLRWMLARGLRPNRLALAAAVKSSSALPDCRGGAALGRCLHGLAVKVG-YADGAVVAKAV 135
Query: 82 LGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS---EVA 138
+ +YGR G L + +VF++M V N +++ + G D LF ++ S E
Sbjct: 136 MDMYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESM 195
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG---IWSA 195
T + V+ + + L G IHG VIK G +++ L N+LV+MY +C G + A
Sbjct: 196 PTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDA 255
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
F + +DVVSWN+II +E+ F +AL L+ +M + PN +T V+ C+ +
Sbjct: 256 HLAFSTICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLV 315
Query: 256 Q-NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
+ GK IH V+++ LE D+ V +AL+ Y+K + F +IV+WN +
Sbjct: 316 EYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTV 375
Query: 315 ILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE 373
I GY P+ L + LL G P+ + +L + L R+G +
Sbjct: 376 IAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNL-------RVGIRVHG 428
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
Y+ + L+ + T+L N + Y++ +++ + ++
Sbjct: 429 YI-------FRHPELLQE-----TSL--------MNALVSFYSQCDRFDAAFRSFITIQN 468
Query: 434 PDIVSWNIVIAACAHNGDY-KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
D VSWN +++ACA++ + ++ L M D+ T ++++ S C + +
Sbjct: 469 KDSVSWNAILSACANSEHHIEQFFRLLGEMWHDVTQWDSVTILNIIRM-STFCGIKMVQE 527
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISA----- 547
HG + + D+ V N ++D Y KCG + + +F + RN++T +IS
Sbjct: 528 SHGYSLRVG-YTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNN 586
Query: 548 ------LGLNGFAQRALEK--------------------FREMEFLGFKPDRVALIAVLT 581
+ N A++ L F +++ G PD +++ +L+
Sbjct: 587 CVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILS 646
Query: 582 ACRH 585
AC H
Sbjct: 647 ACIH 650
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 148/613 (24%), Positives = 265/613 (43%), Gaps = 91/613 (14%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE-----G 58
++VVS+NSII+ YS G E+AL +F MI+ P T +L SL VE G
Sbjct: 265 KDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSL--VEYGRHYG 322
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ V+++GL D V AL+ Y + + V S+F +VTWN++++ +
Sbjct: 323 KEIHGFVVRHGLE-MDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVM 381
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELL 177
+ + + LF L+ + +A S + ++ + +L G ++HG + ++ E
Sbjct: 382 NRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETS 441
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR----M 233
+ N+LV+ Y QC +A + F ++ +D VSWN I+ A A SE+ +E + R M
Sbjct: 442 LMNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANSEHH---IEQFFRLLGEM 498
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
D+ + T + +I ++ +S H ++ D V +A++D YAKC L
Sbjct: 499 WHDVTQWDSVTILNIIRMSTFCGIKMVQES-HGYSLRVGYTGDSSVANAILDAYAKCGYL 557
Query: 294 -------------------------------EGAHLCFSEISNKNIVSWNALILGYASKS 322
E A + F+ ++ K++ +WN + YA
Sbjct: 558 HDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNLMSRLYAQND 617
Query: 323 SPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLG 377
F L LQ G P+ + +++L + + +QL H ++R E+ ++ G
Sbjct: 618 LCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASLEDI-HLEG 676
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
+L+ +Y+K G I++A YN L D+V
Sbjct: 677 ALLDAYSKCGNIANA----------------------YN----------LFQVSLHKDLV 704
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
+ +I A A +G ++ +ELF M I PD+ +LLSACS + G + I
Sbjct: 705 IFTAMIGAYAMHGMAEKAVELFSKMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKSI 764
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR--NVITWTALISALGLNG--- 552
++ + C ++D+ + G + + +M N W +L+ A ++G
Sbjct: 765 REIYGVEPTEEHCACMVDLLARSGRLQDAYSFALDMPPHVVNANAWGSLLGACKVHGEVK 824
Query: 553 FAQRALEKFREME 565
Q A ++ ME
Sbjct: 825 IGQLAADRLFSME 837
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/535 (30%), Positives = 271/535 (50%), Gaps = 43/535 (8%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGI-----------------WS----------- 194
+H VIK+GF E+ + N L++ Y +C + W+
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 195 ---AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
A+ +F+ + RD +WN+++ A+ + +AL + M + N+ +F V+++
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
C+GL + G +H+ + K+ DV++GSALVD Y+KC N+ A F E+ ++N+VSW
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 312 NALILGYASKSSPTSIFLLIEL-LQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIR 366
N+LI + + ++ L+ P+E T + V+ + + + ++H +++
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 367 MGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
+ +L + + YAK I +A ++ I + ++I+G Y
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG-YAMAASTKAAR 340
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
+ +++ ++VSWN +IA NG+ +E L LF ++ + P +Y+F ++L AC+ L
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 486 NLALGSSLHGLIKKTEII-----SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
L LG H + K D FV N LIDMY KCG + +F +M +R+ ++
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W A+I NG+ ALE FREM G KPD + +I VL+AC H G V EG F M
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 520
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
R +GV P DHY C+VDLL R G L+EA+ +I MP P+++IW + L C+ R
Sbjct: 521 RDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHR 575
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 149/578 (25%), Positives = 258/578 (44%), Gaps = 106/578 (18%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
N +I AYS+CG +ED ++F M R +T+ ++
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNI----YTWNSVV--------------------- 93
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
T L L G LDE S+F MP + TWNS+VS F +H E+ + F
Sbjct: 94 ---------TGLTKL----GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
+ + L E SF V+ S D+ G Q+H L+ K+ F ++ + ++LV+MY +C
Sbjct: 141 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC 200
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A+++F ++ R+VVSWN++I ++ +AL+++ M V P++ T VI
Sbjct: 201 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 250 NSCAGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNL--------------- 293
++CA L +G+ +H +V+KN L D+ + +A VD YAKC +
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNV 320
Query: 294 ----------------EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL- 336
+ A L F++++ +N+VSWNALI GY L LL+
Sbjct: 321 IAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
P ++F+++L++ L L H +++ G++ +SG D
Sbjct: 381 SVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK-------------FQSGEEDD- 426
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+ N + +Y + G E + ++ D VSWN +I A NG
Sbjct: 427 ------------IFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYG 474
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVC 510
E LELF+ M + PD+ T + +LSAC + G + + ++ D + C
Sbjct: 475 NEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTC 534
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISA 547
++D+ G+ G + + + EM + + W +L++A
Sbjct: 535 --MVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 239/492 (48%), Gaps = 78/492 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
MP+R+ ++NS++S +++ E+AL F M GF +++F +LS C LN + +G
Sbjct: 112 MPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG 171
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + + K+ F +D ++G+AL+ +Y + G +++ VF++M +++V+WNS+++ F +
Sbjct: 172 VQVHSLIAKSP-FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQ 230
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELL 177
+G + + +F ++ S V E + VI ++ ++ G+++HG V+KN +++
Sbjct: 231 NGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDII 290
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEI-------------------------------RD 206
++N+ V+MY +C+ I A +F + I R+
Sbjct: 291 LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERN 350
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
VVSWN +I ++ +AL L+ + + V P +F ++ +CA L LG H
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHV 410
Query: 267 KVIKNAL------ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
V+K+ E D+FVG++L+D Y KC +E +L F ++ ++ VSWNA+I+G+A
Sbjct: 411 HVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ 470
Query: 321 KS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
++ L E+L+ G +P+ T VL
Sbjct: 471 NGYGNEALELFREMLESGEKPDHITMIGVL------------------------------ 500
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RP 434
++ +G + + + +++ V P + + R G E ++ ++ +P
Sbjct: 501 -SACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQP 559
Query: 435 DIVSWNIVIAAC 446
D V W ++AAC
Sbjct: 560 DSVIWGSLLAAC 571
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 189/387 (48%), Gaps = 20/387 (5%)
Query: 226 ALELYLRMSVDIV-FPNQTTFVYVINSCAGLQ-NSILGKSIHAKVIKNALECDVFVGSAL 283
A + +L+++ D+ F + + F +++SC + ++I + +HA VIK+ ++F+ + L
Sbjct: 2 ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRL 61
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS---KSSPTSIFL-LIELLQLGYR 339
+D Y+KC +LE F ++ +NI +WN+++ G S+F + E Q +
Sbjct: 62 IDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWN 121
Query: 340 PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
F+ R A L ++ + G+ EY S+++ A SGL
Sbjct: 122 SMVSGFAQHDRCEEA---LCYFAMMHKEGFVLNEYSFASVLS--ACSGLNDMNKGVQVHS 176
Query: 400 NIPRAVVPANIIAG-----IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
I ++ +++ G +Y++ G N+ ++ ++ ++VSWN +I NG E
Sbjct: 177 LIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVE 236
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
L++F+ M +R+ PD T S++SAC+ L + +G +HG + K + + +D + N +
Sbjct: 237 ALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFV 296
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
DMY KC I + IF+ M RNVI T++IS + + A F +M + + V
Sbjct: 297 DMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMA----ERNVV 352
Query: 575 ALIAVLTACRHGGLVREGMELFERMNR 601
+ A++ G E + LF + R
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKR 379
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 191/655 (29%), Positives = 321/655 (49%), Gaps = 39/655 (5%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQ 62
R + +N +I G+ + AL + M+ P ++TF ++ +C LN V +
Sbjct: 75 RYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVV 134
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
++ F D F G+AL+ LY +G + + VF+++P + + WN ++ + K G
Sbjct: 135 HDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDF 194
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
++ + FCE+ S + ++ ++ + + G Q+HGLVI +GF+++ VAN+L
Sbjct: 195 DNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTL 254
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
V MY +C + A K+F + D V+WN +I ++ +A L+ M V P+
Sbjct: 255 VAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDS 314
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
TF + S + K +H+ ++++ + DV++ SAL+D Y K ++E A F +
Sbjct: 315 VTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQ 374
Query: 303 ISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL--- 358
++ A+I GY + +I L+Q G N T + VL + A L
Sbjct: 375 NILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPG 434
Query: 359 -QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+LHC I++ EN V ++ YAK G + A F
Sbjct: 435 KELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEF---------------------- 472
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
++ D V WN +I++ + NG + ++LF+ M + D+ + S
Sbjct: 473 ----------FRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSA 522
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
LSA + L L G +HG + + SSDTFV + LIDMY KCG++ + +FN M +N
Sbjct: 523 LSAAANLPALYYGKEMHGYVIRNAF-SSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKN 581
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
++W ++I+A G +G + L+ + EM G PD V + +++AC H GLV EG+ F
Sbjct: 582 EVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFH 641
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M R YG+ M+HY C+VDL R G + EA I +MPF P+A +W T L C+
Sbjct: 642 CMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACR 696
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 123/530 (23%), Positives = 233/530 (43%), Gaps = 36/530 (6%)
Query: 49 SCDSLNPVEGA-QLQASVLKNGL--FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS 105
+C + V+ A Q+ V+ G+ CA + + +LGLY G + ++F ++ +
Sbjct: 20 ACSDASMVQQARQVHTQVIVGGMGDVCAPS---SRVLGLYVLCGRFRDAGNLFFELELRY 76
Query: 106 LVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHG 165
+ WN ++ G+ + + + +++ S V+ + +F VI ++ +H
Sbjct: 77 ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHD 136
Query: 166 LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
GF +L ++L+ +Y I A ++F ++ +RD + WN ++ +S +F
Sbjct: 137 TARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDN 196
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
A+ + M N T+ +++ CA N G +H VI + E D V + LV
Sbjct: 197 AIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVA 256
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFT 344
Y+KC NL A F+ + + V+WN LI GY + + L ++ G +P+ T
Sbjct: 257 MYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVT 316
Query: 345 FSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
F+ L S L L+ HC + +++ +P
Sbjct: 317 FASFLPSILESGSLR-HC---------------------------KEVHSYIVRHRVPFD 348
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
V + + +Y + G K+ Q D+ +I+ +G + + F+++
Sbjct: 349 VYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQ 408
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+ ++ T S+L AC+ + L G LH I K + + V + + DMY KCG +
Sbjct: 409 EGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKR-LENIVNVGSAITDMYAKCGRLD 467
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
+ + F M+DR+ + W ++IS+ NG + A++ FR+M G K D V
Sbjct: 468 LAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSV 517
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 158/371 (42%), Gaps = 31/371 (8%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG-YAS 320
+ +H +VI + S ++ Y C A F E+ + + WN +I G Y
Sbjct: 31 RQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWNWMIRGLYML 90
Query: 321 KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM 380
++ ++L P+++TF +V+++ + L C+++ + LG +
Sbjct: 91 GWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPL-CMVV----HDTARSLGFHV 145
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
+A S LI +Y G + ++ +L D + WN
Sbjct: 146 DLFAGSALIK-----------------------LYADNGYIRDARRVFDELPLRDTILWN 182
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
+++ +GD+ + F MR + ++ T+ +LS C+ N G+ LHGL+ +
Sbjct: 183 VMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGS 242
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
D V N L+ MY KCG++ + K+FN M + +TW LI+ NGF A
Sbjct: 243 G-FEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPL 301
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
F M G KPD V + L + G +R E+ + R + V ++ ++D+
Sbjct: 302 FNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVR-HRVPFDVYLKSALIDVYF 360
Query: 621 RYGHLKEAEKI 631
+ G ++ A KI
Sbjct: 361 KGGDVEMARKI 371
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 107/220 (48%), Gaps = 5/220 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG--FEPTQFTFGGLLSCDSLNPVEG 58
M DR+ V +NS+IS++S+ G E A+ +F M G F+ + + + G
Sbjct: 476 MSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYG 535
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ V++N F +D FV + L+ +Y + G L VF M K+ V+WNSI++ +G
Sbjct: 536 KEMHGYVIRNA-FSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGN 594
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG-EQIHGLVIKNGFDYELL 177
HG +C+ L+ E++R+ + +F+ +I + ++ G H + + G +
Sbjct: 595 HGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARME 654
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
+V++Y + + A K + D W T++GA
Sbjct: 655 HYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGA 694
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
M +N VS+NSII+AY G + L ++ M+ G P TF ++S C V EG
Sbjct: 577 MDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEG 636
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
+ + A ++ LYGR G + E + MP W +++
Sbjct: 637 IHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACR 696
Query: 118 KHGFVE 123
HG VE
Sbjct: 697 LHGNVE 702
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 187/579 (32%), Positives = 301/579 (51%), Gaps = 33/579 (5%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
F+ L+ LY G + F+ + RK + TWNS++S + ++G + + F +L+
Sbjct: 109 FISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLL- 167
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
V ++ F L Q L G +IH V K GF +++ VA SL++MY + + A
Sbjct: 168 -VTKFQADFYTFPPVLKACQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIA 226
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
+F D+ RD+ SWN +I L ++ N +AL++ M ++ + + T ++ CA L
Sbjct: 227 RSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQL 286
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
+ IH VIK+ LE ++FV +AL++ YAK NL A F ++ +++VSWN++I
Sbjct: 287 GDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSII 346
Query: 316 LGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEY 374
Y P + +QL G P+ T V +S+A Q Y+N
Sbjct: 347 AAYEQNDDPVTARGFFFKMQLNGLEPDLLTL--VSLASIAAQ---------SRDYKNSRS 395
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
V G +M + G + +A VV N + +Y + G + K+ + +
Sbjct: 396 VHGFIM----RRGWLMEA------------VVIGNAVMDMYAKLGVIDSAHKVFNLIPVK 439
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSSL 493
D+VSWN +I+ NG E +E+++ M R I + T+VS+L+A + + L G +
Sbjct: 440 DVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRI 499
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
HG + KT + D FV LID+YGKCG + ++ +F ++ + + W A+IS G++G
Sbjct: 500 HGHLIKTNL-HLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGH 558
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
++AL+ FREM+ G KPD V I++L+AC H GLV EG F M + YG++P + HY
Sbjct: 559 GEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLM-QEYGIKPSLKHYG 617
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
C+VDLL R G L+ A I MP P+A IW L C+
Sbjct: 618 CMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACR 656
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 159/612 (25%), Positives = 300/612 (49%), Gaps = 46/612 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMF--LYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ 60
++V ++NS+ISAY R G+ +A+ F L ++ + F+ +TF +L +C +L V+G +
Sbjct: 137 KDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTK-FQADFYTFPPVLKACQTL--VDGRK 193
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ V K G F D FV +L+ +Y R G + S+F+DMP + + +WN+++S ++G
Sbjct: 194 IHCWVFKLG-FQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNG 252
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + E+ + + + ++ + D+ IH VIK+G ++EL V+N
Sbjct: 253 NAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSN 312
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L+NMY + + A+K+F+ + +RDVVSWN+II A ++++ A + +M ++ + P
Sbjct: 313 ALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEP 372
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLEGAHLC 299
+ T V + + A ++ +S+H +++ L V +G+A++D YAK ++ AH
Sbjct: 373 DLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKV 432
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
F+ I K++VSWN LI GY L E +++ YR E
Sbjct: 433 FNLIPVKDVVSWNTLISGYTQNG------LASEAIEV-YRMME----------------- 468
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL---AFVTALNIPRAVVPANIIAGIYN 416
C I++ + S++ +YA G + + + N+ V + +Y
Sbjct: 469 -ECREIKLNQGTWV----SILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYG 523
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G+ + + L Q+ R V WN +I+ +G ++ L+LF+ M+ + PD+ TF+S
Sbjct: 524 KCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFIS 583
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIFNEMT- 534
LLSACS + G L+++ I S + C ++D+ G+ G + + +M
Sbjct: 584 LLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGC--MVDLLGRAGFLEMAYDFIKDMPL 641
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+ W AL+ A ++G + L KF + V +L+ EG++
Sbjct: 642 HPDASIWGALLGACRIHGNIE--LGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVD 699
Query: 595 LFERMNRSYGVE 606
+ R G++
Sbjct: 700 KVRSLARERGLK 711
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 230/498 (46%), Gaps = 51/498 (10%)
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+++H L++ +G ++ LVN+Y + + F ++ +DV +WN++I A
Sbjct: 91 LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYV 150
Query: 219 ESENFGKALELYLRMSVDIVFPNQ-TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
+ +F +A++ + ++ + F TF V+ +C Q + G+ IH V K + DV
Sbjct: 151 RNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC---QTLVDGRKIHCWVFKLGFQWDV 207
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL- 336
FV ++L+ Y++ + A F ++ +++ SWNA+I G + +++ ++L
Sbjct: 208 FVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 267
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
G + T + +L + +H +I+ G E +V +L+ YAK G + DA
Sbjct: 268 GINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDA 327
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
K+ Q+ D+VSWN +IAA N D
Sbjct: 328 Q--------------------------------KVFQQMFLRDVVSWNSIIAAYEQNDDP 355
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
F M+ + PD T VSL S ++ + S+HG I + + + N
Sbjct: 356 VTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNA 415
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM-EFLGFKP 571
++DMY K G I S+ K+FN + ++V++W LIS NG A A+E +R M E K
Sbjct: 416 VMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKL 475
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAE 629
++ +++L A H G +++GM + + ++ +D + C++DL + G L +A
Sbjct: 476 NQGTWVSILAAYAHVGALQQGMRIHGHLIKT---NLHLDVFVGTCLIDLYGKCGRLVDAM 532
Query: 630 KIITTMP----FPPNALI 643
+ +P P NA+I
Sbjct: 533 CLFYQVPRESSVPWNAII 550
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 190/415 (45%), Gaps = 46/415 (11%)
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ F + +SC ++L K +HA ++ + F+ LV+ YA ++ + F
Sbjct: 76 EIDFNSLFDSCT---KTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFD 132
Query: 302 EISNKNIVSWNALILGYASKSS-PTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL- 358
+I K++ +WN++I Y +I +LL + ++ + +TF VL+ A Q L
Sbjct: 133 QIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLK---ACQTLV 189
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
++HC + ++G++ +V SL+ Y++ G + A +
Sbjct: 190 DGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARS--------------------- 228
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
L + D+ SWN +I+ NG+ + L++ MR I D+ T
Sbjct: 229 -----------LFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVA 277
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+L C++L +++ + +H + K + + FV N LI+MY K G++G + K+F +M
Sbjct: 278 SILPVCAQLGDISTATLIHLYVIKHG-LEFELFVSNALINMYAKFGNLGDAQKVFQQMFL 336
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
R+V++W ++I+A N A F +M+ G +PD + L+++ + + +
Sbjct: 337 RDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSV 396
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ R + + + V+D+ + G + A K+ +P + + W T + G
Sbjct: 397 HGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPV-KDVVSWNTLISG 450
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 112/220 (50%), Gaps = 5/220 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLLSCDSLNPV--E 57
+P ++VVS+N++IS Y++ G +A+ ++ M R + Q T+ +L+ + +
Sbjct: 436 IPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQ 495
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ ++K L D FVGT L+ LYG+ G L + + +F +PR+S V WN+I+S G
Sbjct: 496 GMRIHGHLIKTNLHL-DVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHG 554
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
HG E + LF E+ V +F+ ++ S+ ++ G+ L+ + G L
Sbjct: 555 IHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLK 614
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
+V++ + + A KD+ + D W ++GA
Sbjct: 615 HYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGA 654
>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 175/573 (30%), Positives = 294/573 (51%), Gaps = 43/573 (7%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
+ G L + + +F+ MPRK++V W + +S ++G E +F +++ S VA + +
Sbjct: 82 KSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNA 141
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
+ + L GEQ+H L ++ GF + + + L+ +Y +C + +AE++F+ +E D
Sbjct: 142 ALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPD 201
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
VV + +++ AL + +A+++ +M+ + PN+ T ++ C +G+ IH
Sbjct: 202 VVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP----RGIGEQIHG 257
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI-LGYASKSSPT 325
++K V+ +AL+DFY++ + A F + +KN+VSW +++ L
Sbjct: 258 YMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDD 317
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYA 384
++ + E++ G +PNEF FS L + + L Q+HC I
Sbjct: 318 ALRVFSEMISEGVQPNEFAFSIALSACGSVCLGRQIHCSAI------------------- 358
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
K L++D + +N + +Y R+G +E +L ++E PD+VSW I+
Sbjct: 359 KRDLMTD-------------IRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAIS 405
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
A NG ++ + L M + P++Y F S LS+C+ L L G LH L K +
Sbjct: 406 ANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALK---LG 462
Query: 505 SDTFVC--NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
D VC N LI+MY KCG IGS+ F+ M +V++W +LI L +G A ALE F
Sbjct: 463 CDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFS 522
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
EM ++PD ++VL C H GLV+EG F +M YG+ P HY C++D+L R
Sbjct: 523 EMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRN 582
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
G EA ++I MPF P+ LIW+T L C+ R
Sbjct: 583 GRFAEALRMIENMPFEPDVLIWKTLLASCKLHR 615
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 170/623 (27%), Positives = 279/623 (44%), Gaps = 100/623 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGA- 59
MP +NVV++ + IS +R G E A MF M+ G P F L+ + G
Sbjct: 96 MPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAAAGALGLG 155
Query: 60 -QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + ++ G F ADA++G+ L+ LY R G L VF M +V + S+VS +
Sbjct: 156 EQVHSLAVRAG-FAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCR 214
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + + C++ R + E + ++ E GEQIHG ++K +
Sbjct: 215 NGELARAVDVLCQMTRQGLQPNEHTMTSML----AECPRGIGEQIHGYMLKVMGSQSVYA 270
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ +L++ Y + +A+ +F+++E ++VVSW +++ AL ++ M + V
Sbjct: 271 STALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGV 330
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+ F +++C + LG+ IH IK L D+ V +AL+ Y + +
Sbjct: 331 QPNEFAFSIALSACGSV---CLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEA 387
Query: 299 CFSEISNKNIVSWNALI-LGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
+I N ++VSW A I + + S ++ LL+++ G+ PN++ FS L S L
Sbjct: 388 VLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLAL 447
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIA 412
L QLHCL +++G + +L+ Y+K G I A LAF
Sbjct: 448 LHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAF----------------- 490
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
++ D++SWN +I A +GD LE F M ++ PD+
Sbjct: 491 ----------------DVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDS 534
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF+S+L C+ GL+K+ E TF F +
Sbjct: 535 TFLSVLVGCNHA----------GLVKEGE-----TF---------------------FRQ 558
Query: 533 MTDRNVITWTA-----LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-H- 585
MTDR +T T +I LG NG R E R +E + F+PD + +L +C+ H
Sbjct: 559 MTDRYGLTPTPSHYACMIDMLGRNG---RFAEALRMIENMPFEPDVLIWKTLLASCKLHR 615
Query: 586 ----GGLVREG-MELFERMNRSY 603
G L + MEL ER + SY
Sbjct: 616 NLDIGKLAADKLMELSERDSASY 638
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 131/313 (41%), Gaps = 42/313 (13%)
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELL 334
DV + +D K L A F + KN+V+W I G P + + ++L
Sbjct: 69 DVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADML 128
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
+ G PN+F + L + A L Q+H L +R G+ ++ L+
Sbjct: 129 ESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIE--------- 179
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
+Y+R G ++ ++E PD+V + +++A NG
Sbjct: 180 -----------------------LYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNG 216
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
+ +++ M + P+ +T S+L+ C + +G +HG + K + S +
Sbjct: 217 ELARAVDVLCQMTRQGLQPNEHTMTSMLAECPR----GIGEQIHGYMLKV-MGSQSVYAS 271
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
LID Y + G G++ +F + +NV++W +++ +G AL F EM G +
Sbjct: 272 TALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQ 331
Query: 571 PDRVALIAVLTAC 583
P+ A L+AC
Sbjct: 332 PNEFAFSIALSAC 344
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 64/181 (35%), Gaps = 49/181 (27%)
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+D K G +G ++ +F+ M +NV+ WT IS NG + A F +M G P+
Sbjct: 77 LDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPND 136
Query: 574 VA--------------------------------------LIAVLTACRHGGLVREGMEL 595
A LI + + C G +R E+
Sbjct: 137 FACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRC---GSLRAAEEV 193
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP---FPPNALIWRTFLEGCQ 652
F RM P++ Y +V L R G L A ++ M PN + L C
Sbjct: 194 FRRME-----APDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP 248
Query: 653 R 653
R
Sbjct: 249 R 249
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 182/597 (30%), Positives = 301/597 (50%), Gaps = 32/597 (5%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G ++ + ++ NG+ D +G L+ +Y G L + +F+ + + WN ++S +
Sbjct: 387 DGKRVHSVIISNGI-SIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEY 445
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
K G + + LF ++ + V +F V+ + ++ +++HG V+K GF
Sbjct: 446 AKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNT 505
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V NSL+ YF+ G+ SA +F ++ DVVSWN++I + G LE++++M +
Sbjct: 506 AVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLIL 565
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V + TT V V+ + A + N LG+++H +K +V + L+D Y+KC NL GA
Sbjct: 566 GVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGA 625
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F ++ + IVSW + I Y + +I L E+ G RP+ +T + ++ +
Sbjct: 626 TEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACS 685
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L G + + YV+ + M S N+P N + +Y
Sbjct: 686 SSLD-------KGRDVHSYVIKNGMGS-----------------NLP----VTNALINMY 717
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G E + S++ DIVSWN +I + N E LELF M+ + PD+ T
Sbjct: 718 AKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMA 776
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
+L AC+ L L G +HG I + S D V L+DMY KCG + + +F+ +
Sbjct: 777 CVLPACAGLAALDKGREIHGHILRRGYFS-DLHVACALVDMYAKCGLLVLAQLLFDMIPK 835
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+++I+WT +I+ G++GF A+ F EM G +PD + +L AC H GL+ EG +
Sbjct: 836 KDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKF 895
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M GVEP+++HY CVVDLL R G+L +A K I +MP P+ IW L GC+
Sbjct: 896 FNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCR 952
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 153/592 (25%), Positives = 286/592 (48%), Gaps = 53/592 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPV-EG 58
M D+ V +N ++S Y++ G +++ +F M G +TF +L C +L V E
Sbjct: 431 MNDK-VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKEC 489
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ VLK G F ++ V +L+ Y + G ++ ++F+++ +V+WNS+++
Sbjct: 490 KRVHGYVLKLG-FGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVV 548
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF + + +F +++ V + ++ V V+ +N +L G +HG +K F E++
Sbjct: 549 NGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVF 608
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N+L++MY +C + A ++F + +VSW + I A + A+ L+ M V
Sbjct: 609 SNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGV 668
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T ++++CA + G+ +H+ VIKN + ++ V +AL++ YAKC ++E A L
Sbjct: 669 RPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARL 728
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
FS+I K+IVSWN +I GY+ S P L +Q ++P++ T + VL + L
Sbjct: 729 VFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFKPDDITMACVLPACAGLAAL 788
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
++H I+R GY + +V +L+ YAK GL+ ++A +
Sbjct: 789 DKGREIHGHILRRGYFSDLHVACALVDMYAKCGLL--------------------VLAQL 828
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
L + + D++SW ++IA +G E + F MR A I PD +F
Sbjct: 829 ------------LFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSF 876
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+L+ACS L G ++ + + + C ++D+ + G++ + K
Sbjct: 877 SVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYAC--VVDLLARMGNLSKAYKFIES 934
Query: 533 MTDR-NVITWTALISALGLN---GFAQRALEKFREMEFLGFKPDRVALIAVL 580
M + + W L+S ++ A++ E E+E PD VL
Sbjct: 935 MPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELE-----PDNTRYYVVL 981
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 251/543 (46%), Gaps = 37/543 (6%)
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
N+ ++ F + G + + + L + E+ L +S+ V+ + ++ LE G+++H ++I
Sbjct: 340 NAKINKFCEMGDLRNAIELLTKSKSYELGL--NSYCSVLQLCAEKKSLEDGKRVHSVIIS 397
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
NG + + LV MY C + K+F + V WN ++ A+ NF +++ L
Sbjct: 398 NGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 457
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
+ +M V N TF V+ A L K +H V+K + V ++L+ Y K
Sbjct: 458 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFK 517
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHV 348
+E AH F E+S ++VSWN++I G S + + I++L LG + T V
Sbjct: 518 FGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSV 577
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
L + + N +G+L A G F VV +
Sbjct: 578 L-----------------VAWAN----IGNLSLGRALHG-------FGVKACFSEEVVFS 609
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N + +Y++ G N ++ ++ IVSW IAA G Y + + LF M++ +
Sbjct: 610 NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVR 669
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD YT S++ AC+ +L G +H + K + S+ V N LI+MY KCGS+ +
Sbjct: 670 PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNG-MGSNLPVTNALINMYAKCGSVEEARL 728
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F+++ +++++W +I N ALE F +M+ FKPD + + VL AC
Sbjct: 729 VFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAA 787
Query: 589 VREGMELFERMNRSYGVEPEMDHYHC-VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
+ +G E+ + R G ++ H C +VD+ + G L A+ + +P + + W
Sbjct: 788 LDKGREIHGHILRR-GYFSDL-HVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISWTVM 844
Query: 648 LEG 650
+ G
Sbjct: 845 IAG 847
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 220/487 (45%), Gaps = 43/487 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
+ + +VVS+NS+I+ G+ + L +F+ M+ G E T +L + N G
Sbjct: 531 LSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLG 590
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L +K F + LL +Y + G L+ VF M ++V+W S ++ + +
Sbjct: 591 RALHGFGVK-ACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVR 649
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G D + LF E+ V + ++H + L+ G +H VIKNG L V
Sbjct: 650 EGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPV 709
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+NMY +C + A +F + ++D+VSWNT+IG +++ +ALEL+L M
Sbjct: 710 TNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFK 769
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T V+ +CAGL G+ IH +++ D+ V ALVD YAKC L A L
Sbjct: 770 -PDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQL 828
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F I K+++SW +I GY +I E+ G P+E +FS +L +
Sbjct: 829 LFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNAC----- 883
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAG 413
+ SGL+++ F ++ V P +
Sbjct: 884 --------------------------SHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVD 917
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+ R G ++ K + + +PD W ++++ C + D K ++ +++ + PDN
Sbjct: 918 LLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHI--FELEPDNT 975
Query: 473 TFVSLLS 479
+ +L+
Sbjct: 976 RYYVVLA 982
>gi|302774170|ref|XP_002970502.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
gi|300162018|gb|EFJ28632.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
Length = 825
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 176/659 (26%), Positives = 330/659 (50%), Gaps = 41/659 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP RNV+++ ++I A++ +E A ++F M GF+ T+ L+ +C +E G
Sbjct: 162 MPARNVITWTAMIGAHAETS-LEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVG 220
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L +++ + + AL+ +YGR G L++ ++F M + ++ WN++++ +G+
Sbjct: 221 IILHMRSVESS-SAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQ 279
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG VE+ + L+ +++ + +FV ++ + + L + +H ++++G + +
Sbjct: 280 HGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIAL 339
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LV MY +C + +F+ + R+V+SWN ++ A A+ KA+++ M +D V
Sbjct: 340 GTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGV 399
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T V ++N C G + LG+ +H + + E D+ + ++L++ Y +C +E A +
Sbjct: 400 KPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEM 459
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F I +N++SW A++ Y+ ++ LL + L G +P TF L + + +
Sbjct: 460 VFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEA 519
Query: 358 LQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L +H ++ G + + +L+ Y + G I DA A +
Sbjct: 520 LGKGRLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDDTEV------------ 567
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
R + V+W+ +IAA +G +E L+ ++M+ + T
Sbjct: 568 -------------------RKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPAT 608
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F S LSACS L +L G +H +++ + V N L+ MYGKCGS+ + ++F
Sbjct: 609 FASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETS 668
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+++I W A+IS +G + A+E F M+ G PD V + +L+ C HGGL+ EG+
Sbjct: 669 RRQDIICWNAIISGYAQHGQTRDAVELFHRMQQEGVTPDPVTFVCILSVCSHGGLLDEGV 728
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ M G+EP D+Y CV+DLL R G L+EAE+ I ++ P + L C+
Sbjct: 729 YAYASMVE-LGLEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLSSCK 786
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 156/632 (24%), Positives = 295/632 (46%), Gaps = 50/632 (7%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L +C L ++ A+ S + F+G L+ YG+ LD+ FE M K++
Sbjct: 7 LQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNV 66
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
TW +I+ + H + L +++ V + + + Q L G+ IHGL
Sbjct: 67 YTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKLIHGL 126
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
+ ++G +L++ N+LV+MY C + A+++F + R+V++W +IGA AE+ + +A
Sbjct: 127 IAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAET-SLEQA 185
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
+++ M ++ N T+V ++ +C+ + +G +H + ++++ + + +AL+
Sbjct: 186 FKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITM 245
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL-LQLGYRPNEFTF 345
Y +C LE A FS + ++I++WNALI Y LL +L LQ G +P++ TF
Sbjct: 246 YGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTF 305
Query: 346 SHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
+L S + L +H I+ G +S +A TAL
Sbjct: 306 VALLTMSNGPEALTDVKLVHSHIVESG--------------------VSINIALGTAL-- 343
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
+Y++ +T L ++ + +++SWN+++ A A +G ++ +++ +Y
Sbjct: 344 ----------VAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEY 393
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M+ + PDN T V LL+ C+ +L LG +HG I + +D + N L++MYG+CG
Sbjct: 394 MQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGR-CEADLILWNSLLNMYGRCG 452
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ + +F+ + RNVI+WTA+++A AL F + G KP + + L
Sbjct: 453 EVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALD 512
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC + +G L G + ++ +V + R G +++A+ N
Sbjct: 513 ACVGAEALGKG-RLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNH 571
Query: 642 LIWRTFL----------EGCQRCRIAKYDTLN 663
+ W + EG Q R + L+
Sbjct: 572 VTWSAMIAAFVQHGQDREGLQHLRFMQQQGLD 603
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/511 (22%), Positives = 238/511 (46%), Gaps = 33/511 (6%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
+V ++ + L+ ++H +++ D + + N L++ Y +C + A + F+ +
Sbjct: 3 YVRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMS 62
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
++V +W IIG A A+ L +M ++ V P+ T + + SC Q GK
Sbjct: 63 YKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKL 122
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS 323
IH + ++ +CD+ + +ALV Y C +++ A F + +N+++W A+I G +++S
Sbjct: 123 IHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMI-GAHAETS 181
Query: 324 PTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTS 382
F + L++L G++ N T+ ++++ + L++ ++ E+
Sbjct: 182 LEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESS---------- 231
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
+A+ P N + +Y R G+ + + S + DI++WN +
Sbjct: 232 --------------SAMETPL----CNALITMYGRCGRLEDARAIFSSMVERDIIAWNAL 273
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
I +G +E + L++ M PD TFV+LL+ + L +H I ++
Sbjct: 274 ITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVHSHIVESG- 332
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
+S + + L+ MY KC S+ + +F +M RNVI+W +++A +G ++A++
Sbjct: 333 VSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITE 392
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
M+ G KPD V + +L C ++ G ++ + E ++ ++ ++++ R
Sbjct: 393 YMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGR-CEADLILWNSLLNMYGRC 451
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
G +++AE + + N + W L R
Sbjct: 452 GEVEQAEMVFDGI-LQRNVISWTAMLTAYSR 481
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 195/659 (29%), Positives = 331/659 (50%), Gaps = 47/659 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQL 61
R+ +N++I A S G V D + M+ G +P + T+ +L D + +G ++
Sbjct: 101 RSAFLWNTLIRANSIAG-VFDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREV 159
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
K G F D FVG LL YG G + + VF++MP + V+WN+++ + HGF
Sbjct: 160 HGVAFKLG-FDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGF 218
Query: 122 VEDCMFLFCELVRSEVALTES--SFVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELLV 178
E+ + F +V ++ + + V V+ + +D +H +K G + V
Sbjct: 219 YEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKV 278
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LV++Y +C +++K+F +++ R+V+SWN II + + + AL+++ M + +
Sbjct: 279 GNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGM 338
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T ++ L LG +H +K A+E DVF+ ++L+D YAK + A
Sbjct: 339 RPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIAST 398
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F+++ +NIVSWNA+I +A L+ +Q G PN TF++VL +
Sbjct: 399 IFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGF 458
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L ++H IIR+G +V +L Y+K G LN+ + V
Sbjct: 459 LNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCG----------CLNLAQNV-------- 500
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+N +V+ D VS+NI+I + D E L LF MR + PD +
Sbjct: 501 -------FNISVR--------DEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVS 545
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F+ ++SAC+ L + G +HGL+ + ++ + FV N L+D+Y +CG I + K+F +
Sbjct: 546 FMGVVSACANLAFIRQGKEIHGLLVR-KLFHTHLFVANSLLDLYTRCGRIDLATKVFYCI 604
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+++V +W +I G+ G A+ F M+ G + D V+ +AVL+AC HGGL+ +G
Sbjct: 605 QNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGR 664
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F+ M +EP HY C+VDLL R G ++EA +I + P+ IW L C+
Sbjct: 665 KYFKMMC-DLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALLGACR 722
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 175/616 (28%), Positives = 292/616 (47%), Gaps = 59/616 (9%)
Query: 50 CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP--RKSLV 107
CD+L+ + Q+ A L +G + +L+ Y G + +F+ +S
Sbjct: 47 CDTLSQTK--QVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAF 104
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLV 167
WN+++ G V D + +VR+ V E ++ V+ S+ ++ G ++HG+
Sbjct: 105 LWNTLIRANSIAG-VFDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVA 163
Query: 168 IKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKAL 227
K GFD ++ V N+L+ Y C A K+F ++ RD VSWNT+IG + + +AL
Sbjct: 164 FKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEAL 223
Query: 228 ELYLRM--SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALV 284
+ M + + P+ T V V+ CA ++ ++ + +H +K L V VG+ALV
Sbjct: 224 GFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALV 283
Query: 285 DFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEF 343
D Y KC + + + F EI +N++SWNA+I ++ + + L+ G RPN
Sbjct: 284 DVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSV 343
Query: 344 TFSH---VLRSSLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
T S VL F+L +++H ++M E+ ++ SL+ YAKSG
Sbjct: 344 TISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSG------------ 391
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ I + I+N+ G N IVSWN +IA A N E +EL
Sbjct: 392 -------SSRIASTIFNKMGVRN-------------IVSWNAMIANFARNRLEYEAVELV 431
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
+ M+A P+N TF ++L AC++L L +G +H I + S D FV N L DMY K
Sbjct: 432 RQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVG-SSLDLFVSNALTDMYSK 490
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
CG + + +FN ++ R+ +++ LI + +L F EM LG +PD V+ + V
Sbjct: 491 CGCLNLAQNVFN-ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGV 549
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV-----DLLVRYGHLKEAEKIITT 634
++AC + +R+G E+ + R ++ H H V DL R G + A K+
Sbjct: 550 VSACANLAFIRQGKEIHGLLVR------KLFHTHLFVANSLLDLYTRCGRIDLATKVFYC 603
Query: 635 MPFPPNALIWRTFLEG 650
+ + W T + G
Sbjct: 604 IQ-NKDVASWNTMILG 618
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 152/565 (26%), Positives = 276/565 (48%), Gaps = 50/565 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI--NRGFEPTQFTFGGLLS--CDSLNPV 56
MP+R+ VS+N++I S G+ E+AL F M+ G +P T +L ++ + V
Sbjct: 198 MPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKV 257
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ LK GL VG AL+ +YG+ G VF+++ +++++WN+I++ F
Sbjct: 258 MARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSF 317
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G D + +F ++ + + ++ L + G ++HG +K + ++
Sbjct: 318 SFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDV 377
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++NSL++MY + A +F + +R++VSWN +I A + +A+EL +M
Sbjct: 378 FISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAK 437
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
PN TF V+ +CA L +GK IHA++I+ D+FV +AL D Y+KC L A
Sbjct: 438 GETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLA 497
Query: 297 HLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLR--SSL 353
F+ IS ++ VS+N LI+GY+ + S S+ L E+ LG RP+ +F V+ ++L
Sbjct: 498 QNVFN-ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANL 556
Query: 354 AF--QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
AF Q ++H L++R + + +V SL+
Sbjct: 557 AFIRQGKEIHGLLVRKLFHTHLFVANSLLD------------------------------ 586
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y R G+ + K+ ++ D+ SWN +I G+ + LF+ M+ + D+
Sbjct: 587 --LYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDS 644
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT-FVCNMLIDMYGKCGSIGSSVKIF 530
+FV++LSACS + G ++ I + T + C ++D+ G+ G + + +
Sbjct: 645 VSFVAVLSACSHGGLIEKGRKYFKMMCDLNIEPTHTHYAC--MVDLLGRAGLMEEAADLI 702
Query: 531 NEMT---DRNVITWTALISALGLNG 552
++ D N+ W AL+ A ++G
Sbjct: 703 RGLSIIPDTNI--WGALLGACRIHG 725
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 175/355 (49%), Gaps = 17/355 (4%)
Query: 313 ALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLA--FQLLQLHCLIIRMGY 369
+LIL YAS P++ LL + + Y + F ++ ++R+ S+A F + ++R G
Sbjct: 75 SLILQYASFGHPSNSLLLFQH-SVAYSRSAFLWNTLIRANSIAGVFDGFGTYNTMVRAGV 133
Query: 370 E----NYEYVLGSLMTSYA--KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
+ Y +VL + + + + G +AF L V N + Y G + +
Sbjct: 134 KPDECTYPFVL-KVCSDFVEVRKGREVHGVAF--KLGFDGDVFVGNTLLAFYGNCGLFGD 190
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR--IYPDNYTFVSLLSAC 481
+K+ ++ D VSWN VI C+ +G Y+E L F+ M AA+ I PD T VS+L C
Sbjct: 191 AMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVC 250
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
++ + + +H K ++ V N L+D+YGKCGS +S K+F+E+ +RNVI+W
Sbjct: 251 AETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISW 310
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
A+I++ G AL+ FR M G +P+ V + ++L GL + GME+ +
Sbjct: 311 NAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEV-HGFSL 369
Query: 602 SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRI 656
+E ++ + ++D+ + G + A I M N + W + R R+
Sbjct: 370 KMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGV-RNIVSWNAMIANFARNRL 423
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 176/572 (30%), Positives = 289/572 (50%), Gaps = 45/572 (7%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
+ G L + + +F+ MPRK++V W S++S + ++G E + +F ++V S VA + +
Sbjct: 60 KSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNA 119
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
+ ++ L GEQ+H L ++ GF + + + L+ MY +C + +A+++F ++ D
Sbjct: 120 ALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPD 179
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
VV + ++I A + F A E ++M + PN+ T ++ +C +LG+ IH
Sbjct: 180 VVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP----RVLGQQIHG 235
Query: 267 KVIKNA--LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS- 323
+IK V+ +AL+DFY++ + A F + KN+VSW +++ Y
Sbjct: 236 YLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRL 295
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL-LQLHCLIIRMGYENYEYVLGSLMTS 382
++ + +++ G PNEF S VL + + L QLHC I
Sbjct: 296 EEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAI----------------- 338
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
K LI+D + +N + +Y RTG E +L+++E PD+VSW
Sbjct: 339 --KHDLITD-------------IRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTA 383
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
I+A NG ++ + L M + P+ Y F S+LS+C+ + +L G H L K
Sbjct: 384 ISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALK--- 440
Query: 503 ISSDTFVC--NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
+ D+ +C N LI+MY KCG +GS+ F+ M +V +W +LI +G A +ALE
Sbjct: 441 LGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEV 500
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
F +M G KPD + VL C H G+V EG F M Y P HY C++D+L
Sbjct: 501 FSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLG 560
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G EA ++I MPF P+ALIW+T L C+
Sbjct: 561 RNGRFDEALRMINDMPFEPDALIWKTLLASCK 592
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 140/563 (24%), Positives = 262/563 (46%), Gaps = 54/563 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
MP +NVV++ S++S Y+R G E AL MF M+ G P F L++C L + G
Sbjct: 74 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 133
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + ++ G F DA++G+ L+ +Y R G L VF+ M +V + S++S F +
Sbjct: 134 EQVHSLAVRAG-FAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCR 192
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYE-L 176
+G E ++++ + E + ++ G+QIHG +IK G + +
Sbjct: 193 NGEFELAAEALIQMLKQGLKPNEHTMTTILTACPR----VLGQQIHGYLIKKIGLRSQSV 248
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ +L++ Y + A+ +F + ++VVSW +++ +AL+++ M +
Sbjct: 249 YSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISE 308
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN+ V+ +C + LG+ +H IK+ L D+ V +AL+ Y + +E
Sbjct: 309 GVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEEL 365
Query: 297 HLCFSEISNKNIVSW-NALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
++I N ++VSW A+ + + +I LL ++ G+ PN + FS VL S
Sbjct: 366 EAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADV 425
Query: 356 ----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
Q +Q HCL +++G ++ + N +
Sbjct: 426 ASLDQGMQFHCLALKLGCDS--------------------------------EICTGNAL 453
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y++ GQ + D+ SWN +I A +GD + LE+F MR+ I PD+
Sbjct: 454 INMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDD 513
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLI--KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
TF+ +L C+ + G L+ + + + + C +IDM G+ G ++++
Sbjct: 514 STFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYAC--MIDMLGRNGRFDEALRM 571
Query: 530 FNEMT-DRNVITWTALISALGLN 551
N+M + + + W L+++ L+
Sbjct: 572 INDMPFEPDALIWKTLLASCKLH 594
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 211/469 (44%), Gaps = 37/469 (7%)
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
+N + + A +F + ++VV+W +++ + AL ++ M V PN
Sbjct: 55 LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPND 114
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
+ +CA L G+ +H+ ++ D ++GS L++ Y++C +L A F
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174
Query: 303 ISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
+ + ++V + +LI + + LI++L+ G +PNE T + +L + Q+H
Sbjct: 175 MDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIH 234
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
+I+ K GL S ++ TAL Y+R G++
Sbjct: 235 GYLIK------------------KIGLRSQSVYSSTAL------------IDFYSRNGEF 264
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
+ L ++VSW ++ +G +E L++F M + + P+ + +L AC
Sbjct: 265 KLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC 324
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
++ LG LH K ++I +D V N L+ MYG+ G + + N++ + ++++W
Sbjct: 325 G---SIGLGRQLHCSAIKHDLI-TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSW 380
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
T ISA NGF ++A+ +M GF P+ A +VL++C + +GM+ F +
Sbjct: 381 TTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ-FHCLAL 439
Query: 602 SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G + E+ + ++++ + G + A M + W + + G
Sbjct: 440 KLGCDSEICTGNALINMYSKCGQMGSARLAFDVM-HTHDVTSWNSLIHG 487
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 143/322 (44%), Gaps = 42/322 (13%)
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELL 334
DV + ++ K L A F + KN+V+W +++ GY P ++ + +++
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
+ G PN+F + L + L Q+H L +R G+ ++ L+
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIE--------- 157
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
+Y+R G ++ +++ PD+V + +I+A NG
Sbjct: 158 -----------------------MYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNG 194
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFV 509
+++ E M + P+ +T ++L+AC ++ LG +HG LIKK + S +
Sbjct: 195 EFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYS 250
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
LID Y + G + +F+ + +NV++W +++ +G + AL+ F +M G
Sbjct: 251 STALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGV 310
Query: 570 KPDRVALIAVLTACRHGGLVRE 591
P+ AL VL AC GL R+
Sbjct: 311 DPNEFALSIVLGACGSIGLGRQ 332
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/506 (32%), Positives = 268/506 (52%), Gaps = 49/506 (9%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
IHG ++K GF +L V LVN+Y +C + SA K+F ++ R+V +W T++ ++ +
Sbjct: 86 IHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSH 145
Query: 223 FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSA 282
AL+L+++M +P+ T V+N+C+ LQ+ GK +HA +IK ++ D +G++
Sbjct: 146 PLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNS 205
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPN 341
L FY+K LE A F I K+++SW ++I + S+ +++L G +PN
Sbjct: 206 LSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPN 265
Query: 342 EFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
E+T + VL + L Q+H L I++GY + + S+M Y K G + +A
Sbjct: 266 EYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEA----- 320
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE--- 454
KL +E ++V+WN +IA A D E
Sbjct: 321 ---------------------------QKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDV 353
Query: 455 --------VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
L +F+ + + + PD +TF S+LS CS L L G +HG I K+ +++ D
Sbjct: 354 AAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLA-D 412
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
V L+ MY KCGSI + K F EM R +I+WT++I+ +G +Q+AL+ F +M
Sbjct: 413 VVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRL 472
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
+G KP++V + VL+AC H GL E + FE M + Y ++P MDH+ C++D+ +R G ++
Sbjct: 473 VGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVE 532
Query: 627 EAEKIITTMPFPPNALIWRTFLEGCQ 652
EA ++ M F PN IW + GC+
Sbjct: 533 EAFDVVHKMNFEPNETIWSMLIAGCR 558
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 148/553 (26%), Positives = 269/553 (48%), Gaps = 53/553 (9%)
Query: 40 TQFTFGGLLSCDSLN-PVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVF 98
+ + F L C N E + ++K G F D FV T L+ +Y + G ++ VF
Sbjct: 64 SSYYFPLLQECIDRNLATEARMIHGHIVKTG-FHEDLFVMTFLVNVYSKCGVMESAHKVF 122
Query: 99 EDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLE 158
+++PR+++ W ++++ + ++ + LF +++ + + + V++ S+ Q +E
Sbjct: 123 DNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIE 182
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
FG+Q+H +IK D++ + NSL + Y + + A K FK ++ +DV+SW ++I +
Sbjct: 183 FGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCC 242
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
++ ++L ++ M D + PN+ T V+++C + LG IH+ IK +
Sbjct: 243 DNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSIL 302
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS------------KSSPTS 326
+ ++++ Y KC L A F + N+V+WNA+I G+A KS T+
Sbjct: 303 IKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTA 362
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
+ + +L + G +P+ FTFS VL S+ L+ L E E + G ++ KS
Sbjct: 363 LAMFQKLYRSGMKPDLFTFSSVL--SVCSNLVAL---------EQGEQIHGQII----KS 407
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
G+++D VV + +YN+ G ++ K ++ ++SW +I
Sbjct: 408 GVLAD-------------VVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGF 454
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK--LCNLALGSSLHGLIKKTEIIS 504
A +G ++ L+LF+ MR I P+ TFV +LSACS L + AL L++K I
Sbjct: 455 ARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEAL--YYFELMQKQYNIK 512
Query: 505 S--DTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKF 561
D F C LIDMY + G + + + ++M + N W+ LI+ G + L +
Sbjct: 513 PVMDHFAC--LIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIA--GCRSHGKSDLGFY 568
Query: 562 REMEFLGFKPDRV 574
+ L KP V
Sbjct: 569 AAEQLLKLKPKDV 581
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/499 (24%), Positives = 242/499 (48%), Gaps = 54/499 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P RNV ++ ++++ Y + + AL++F+ M+ G P+ +T G +L +C SL +E G
Sbjct: 125 LPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFG 184
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A ++K + D +G +L Y + L+ + F+ + K +++W S++S
Sbjct: 185 KQVHAYLIKYHI-DFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCD 243
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + F +++ + E + V+ L+ G QIH L IK G+ +L+
Sbjct: 244 NGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILI 303
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-----------AL 227
NS++ +Y +C + A+K+F+ +E ++V+WN +I A+ + + AL
Sbjct: 304 KNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTAL 363
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
++ ++ + P+ TF V++ C+ L G+ IH ++IK+ + DV VG+ALV Y
Sbjct: 364 AMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMY 423
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFS 346
KC +++ A F E+ ++ ++SW ++I G+A L E ++L G +PN+ TF
Sbjct: 424 NKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFV 483
Query: 347 HVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
VL ++ + +GL +AL + + +
Sbjct: 484 GVL-------------------------------SACSHAGLADEALYYFELMQKQYNIK 512
Query: 407 PA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKY 461
P + +Y R G+ E ++ ++ P+ W+++IA C +G K L +
Sbjct: 513 PVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHG--KSDLGFYAA 570
Query: 462 MRAARIYP-DNYTFVSLLS 479
+ ++ P D T+VSLL+
Sbjct: 571 EQLLKLKPKDVETYVSLLN 589
>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g52850, chloroplastic; Flags: Precursor
gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 893
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 195/661 (29%), Positives = 325/661 (49%), Gaps = 45/661 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M R V ++ +ISA+++ AL +F M+ G P +FTF ++ SC L + G
Sbjct: 84 MSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYG 143
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV-SIFG 117
++ SV+K G F ++ VG++L LY + G E +F + ++W ++ S+ G
Sbjct: 144 GRVHGSVIKTG-FEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVG 202
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ E F + E+V++ V E +FV ++ G S+ LEFG+ IH +I G ++
Sbjct: 203 ARKWREALQF-YSEMVKAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSNIIVRGIPLNVV 260
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ SLV+ Y Q + + A ++ +DV W +++ + +A+ +L M
Sbjct: 261 LKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG 320
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE-GA 296
+ PN T+ +++ C+ +++ GK IH++ IK E VG+ALVD Y KC E A
Sbjct: 321 LQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEA 380
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF 355
F + + N+VSW LILG F LL+E+++ PN T S VLR+
Sbjct: 381 SRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKL 440
Query: 356 ----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
++L++H ++R + V SL+ +YA S + A N+ R+
Sbjct: 441 RHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVD------YAWNVIRS------- 487
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++R D +++ ++ G ++ L + YM I D
Sbjct: 488 -------------------MKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQ 528
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ +SA + L L G LH K+ S V N L+DMY KCGS+ + K+F
Sbjct: 529 LSLPGFISASANLGALETGKHLHCYSVKSG-FSGAASVLNSLVDMYSKCGSLEDAKKVFE 587
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
E+ +V++W L+S L NGF AL F EM +PD V + +L+AC +G L
Sbjct: 588 EIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDL 647
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G+E F+ M + Y +EP+++HY +V +L R G L+EA ++ TM PNA+I++T L C
Sbjct: 648 GLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRAC 707
Query: 652 Q 652
+
Sbjct: 708 R 708
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/486 (30%), Positives = 225/486 (46%), Gaps = 39/486 (8%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
G IH VIK G L + N+L+++Y + GIW+A K+F ++ R V +W +I A +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
S+ F AL L+ M PN+ TF V+ SCAGL++ G +H VIK E + V
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGY 338
GS+L D Y+KC + A FS + N + +SW +I ++ ++ E+++ G
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 339 RPNEFTFSHVLRSSLAFQL---LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
PNEFTF +L +S L +H II G
Sbjct: 222 PPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRG--------------------------- 254
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
IP VV + Y++ + + V++L+ D+ W V++ N KE
Sbjct: 255 -----IPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEA 309
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
+ F MR+ + P+N+T+ ++LS CS + +L G +H K S T V N L+D
Sbjct: 310 VGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS-TDVGNALVD 368
Query: 516 MYGKC-GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
MY KC S + ++F M NV++WT LI L +GF Q EM +P+ V
Sbjct: 369 MYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVV 428
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
L VL AC VR +E+ + R + V+ EM + +VD + A +I +
Sbjct: 429 TLSGVLRACSKLRHVRRVLEIHAYLLRRH-VDGEMVVGNSLVDAYASSRKVDYAWNVIRS 487
Query: 635 MPFPPN 640
M N
Sbjct: 488 MKRRDN 493
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 151/643 (23%), Positives = 276/643 (42%), Gaps = 78/643 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE-GA 59
+ + + +S+ +IS+ +AL+ + M+ G P +FTF LL S +E G
Sbjct: 185 LQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGK 244
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ ++++ G+ + + T+L+ Y + +++ V V + + W S+VS F ++
Sbjct: 245 TIHSNIIVRGI-PLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRN 303
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
++ + F E+ + ++ ++ S + L+FG+QIH IK GF+ V
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 180 NSLVNMYFQC-AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LV+MY +C A A ++F + +VVSW T+I L + L + M V
Sbjct: 364 NALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T V+ +C+ L++ IHA +++ ++ ++ VG++LVD YA ++ A
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWN 483
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQL 357
+ ++ +++ +L+ + +I + G R ++ + + +S
Sbjct: 484 VIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGA 543
Query: 358 LQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L+ LHC ++ G+ VL SL+ Y+K G + DA
Sbjct: 544 LETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA--------------------- 582
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
K+ ++ PD+VSWN +++ A NG L F+ MR PD+ T
Sbjct: 583 -----------KKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVT 631
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F+ LLSACS LG ++KK I+N
Sbjct: 632 FLILLSACSNGRLTDLGLEYFQVMKK-----------------------------IYN-- 660
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+ V + L+ LG G R E +E + KP+ + +L ACR+ G + G
Sbjct: 661 IEPQVEHYVHLVGILGRAG---RLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGE 717
Query: 594 ELFERMNRSYGVEP-EMDHYHCVVDLLVRYGHLKEAEKIITTM 635
++ N+ + P + Y + DL G + A+K M
Sbjct: 718 DM---ANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLM 757
>gi|77553408|gb|ABA96204.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 887
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 192/670 (28%), Positives = 326/670 (48%), Gaps = 54/670 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP RN+VS+ +++SA +R G R F+ MI GF P +F+ +L+ C S+
Sbjct: 48 MPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFSLATMLTACHSMVAHSSN 107
Query: 60 QLQASVLKNGL-----FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+L ++ +G+ ++ FVG++LL +Y +HG + F + K L WN+++
Sbjct: 108 KLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLE 167
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ +GF + + S +A +++ + S G Q+H LVI + +
Sbjct: 168 GYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQWGLGRQLHCLVIHSMLES 227
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V NSLV+MYF+ +A +F+ + +D VSWNT+ A E+ + MS
Sbjct: 228 NTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMS 287
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
PN+ TF ++ +N+ LG I A ++ +V V +A+++ +C L+
Sbjct: 288 RTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLD 347
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A+ F ++ +NIV+WN +I GY S S ++ L L+ +G RP+EFT+S VL
Sbjct: 348 RAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVLS--- 404
Query: 354 AFQLL-------QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
AFQ Q+H +I++ G+ + ++V SL+ + +A AF
Sbjct: 405 AFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKA--------NAAAF----------- 445
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
G ++K++ + ++VSW +I+A +G EV+ LF R
Sbjct: 446 ------------GSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDS 493
Query: 467 I-YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF-VCNMLIDMYGKCGSIG 524
PD + ++L+AC+ + +H L+ KT S+ F V + ++D Y KCG I
Sbjct: 494 TNKPDEFILATVLNACANAALIRHCRCIHSLVLKTG--HSNHFCVASAVVDAYAKCGEIT 551
Query: 525 SSVKIFNEMTD--RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
S+ F ++ + I + +++A +G AL + EM P +A+L+A
Sbjct: 552 SAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSA 611
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H GLV +G F M +YG+ P +Y C+VDLL R G L EA+ +I MPF P
Sbjct: 612 CSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPA 671
Query: 643 IWRTFLEGCQ 652
+WR+ + GC+
Sbjct: 672 VWRSLVNGCR 681
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 156/584 (26%), Positives = 262/584 (44%), Gaps = 61/584 (10%)
Query: 85 YGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
Y R G LD + VF++MP ++LV+W ++VS ++G F ++RS E S
Sbjct: 32 YARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFSL 91
Query: 145 VGVI---HGL--SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
++ H + + L +HG+ ++ G D V +SL+ MY + I +A++ F
Sbjct: 92 ATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAF 151
Query: 200 KDVEIRDVVSWNTIIGALAESENFG-KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
+ +D+ WN ++ S FG A+ L M + P++ T++ + +C+
Sbjct: 152 AHIRNKDLTCWNAMLEGYV-SNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQW 210
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
LG+ +H VI + LE + V ++LVD Y + E A F +I K+ VSWN + G+
Sbjct: 211 GLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGF 270
Query: 319 ASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQL----LQLHCLIIRMGYENYE 373
A ++F LI++ + G++PNE TFS +LR S A + LQ+ L R GY +
Sbjct: 271 AHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNV 330
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
V +++ + GL+ A F +L
Sbjct: 331 LVANAVINMLFRCGLLDRAYGFFCSLTF-------------------------------- 358
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
+IV+WN +IA ++ + LF+ + PD +T+ ++LSA + +
Sbjct: 359 RNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQI 418
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKC-GSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
H +I K + +S FV LI GS+ SS+KI + +++W A+ISA +G
Sbjct: 419 HAIILK-QGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHG 477
Query: 553 FAQRALEKFREMEFLG---FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
+ F F G KPD L VL AC + L+R R S ++
Sbjct: 478 LNDEVIFLFN--LFRGDSTNKPDEFILATVLNACANAALIRHC-----RCIHSLVLKTGH 530
Query: 610 DHYHC----VVDLLVRYGHLKEAEKIITTMPFPPN-ALIWRTFL 648
++ C VVD + G + AE T + N A+++ T L
Sbjct: 531 SNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTML 574
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 6/180 (3%)
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N + Y R G + +K+ ++ ++VSW +++A NG F M +
Sbjct: 26 NYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFC 85
Query: 469 PDNYTFVSLLSACSKLC-----NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
P+ ++ ++L+AC + L + SLHG+ + + S+ FV + L+ MY K G I
Sbjct: 86 PNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAG-LDSNPFVGSSLLLMYAKHGRI 144
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
++ + F + ++++ W A++ NGF A+ M G PDR I+ + AC
Sbjct: 145 AAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKAC 204
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 16/106 (15%)
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
+ TF N L Y + G + S++K+F+EM RN+++WTA++SA NG F M
Sbjct: 20 AHTFNMNYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSM 79
Query: 565 EFLGFKPDRVALIAVLTACR----------------HGGLVREGME 594
GF P+ +L +LTAC HG VR G++
Sbjct: 80 IRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLD 125
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 190/675 (28%), Positives = 325/675 (48%), Gaps = 95/675 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMF-LYMINRGFEPTQFTFGGLLS-CDSLNPVE- 57
MP+RN VS N+II+ + GY AL + L M+ +P+ TF + S C L V
Sbjct: 97 MPERNTVSLNTIITTMVKNGYERQALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNC 156
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + VLK G F ++ +V ALL +Y + G ++ VFE + + VT+ +++
Sbjct: 157 GRRNHGLVLKVG-FDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLS 215
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVI---------------HGLSNEQDLEFGEQ 162
+ V++ + LF ++R + + S ++ GLS G+Q
Sbjct: 216 QTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQ---GKQ 272
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
IH L +K+GF+ +L + NSL++MY + + SAE +F++++ VVSWN +I +
Sbjct: 273 IHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCD 332
Query: 223 FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSA 282
KALE + RM P+ T++ ++ +C KS KV + +C
Sbjct: 333 SEKALECFQRMQCCGYEPDDVTYINMLTACV--------KSGDVKVGRQIFDC------- 377
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR-PN 341
+S+ +++SWNA++ GY + L +Q ++ P+
Sbjct: 378 --------------------MSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPD 417
Query: 342 EFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
T + +L S LL Q+H + ++G+ + YV SL+
Sbjct: 418 RTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLIN---------------- 461
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
+Y++ G+ + + S+L D+V WN +IA + N ++ L
Sbjct: 462 ----------------VYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALA 505
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
FK MR +P ++F ++ S+C+KL +L G +H I K + + FV + L++MY
Sbjct: 506 CFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYV-DNVFVGSSLVEMY 564
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
KCG +G++ F+ M +N++TW +I NG+ A+ +++M G KPD + +
Sbjct: 565 CKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFV 624
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
AVLTAC H LV EG+E+F M + + V P++DHY C++D L R G E E I+ TMP+
Sbjct: 625 AVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPY 684
Query: 638 PPNALIWRTFLEGCQ 652
+ ++W L C+
Sbjct: 685 KDDTIVWEVVLSSCR 699
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/592 (21%), Positives = 250/592 (42%), Gaps = 88/592 (14%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
+ + ++ + L + IH + + + + N L+++Y +C I SA +F +
Sbjct: 7 NLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKI 66
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMS---------------------------- 234
+++ S+N I+ A +S N A L+L+M
Sbjct: 67 PHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYD 126
Query: 235 ----VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
+ V P+ TF V ++C GL++ G+ H V+K + +++V +AL+ Y KC
Sbjct: 127 LMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKC 186
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL-LQLGYRPNEFTFSHVL 349
E A F I N V++ ++ G + + L L L+ G + + S +L
Sbjct: 187 GLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTIL 246
Query: 350 ---RSSLAF-------------QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
++F Q Q+H L ++ G+E ++ SL+ YAK+G + A
Sbjct: 247 VICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAE 306
Query: 394 AFVTALNIPRAVVPANI-IAGIYNR----------------------------------T 418
L+ +VV NI I+G NR +
Sbjct: 307 NVFENLD-KHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKS 365
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
G ++ + P ++SWN +++ + D+ E +ELF+ M+ PD T +L
Sbjct: 366 GDVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIIL 425
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
S+C++L L G +H + +K D +V + LI++Y KCG + S +F+++++ +V
Sbjct: 426 SSCAELGLLEAGKQVHAVSQKLGFY-DDVYVASSLINVYSKCGKMEVSKHVFSKLSELDV 484
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
+ W ++I+ +N Q AL F+ M GF P + + ++C + +G ++ +
Sbjct: 485 VCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQ 544
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + G + +V++ + G + A MP N + W + G
Sbjct: 545 IIKD-GYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMP-GKNIVTWNEMIHG 594
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 200/429 (46%), Gaps = 30/429 (6%)
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
+ ++ SC ++ K IHA++ + L D F+ + L+D Y+KC+ + AH F +I
Sbjct: 8 LINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIP 67
Query: 305 NKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL--AFQLLQLHC 362
+KNI S+NA++ + ++ L LQ+ R N + + ++ + + ++ L
Sbjct: 68 HKNIFSYNAILSAFCKSNNLQYACRL--FLQMPER-NTVSLNTIITTMVKNGYERQALDT 124
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDA------LAFVTALNIPRAVVPANIIAGIYN 416
+ M YE+ + + T ++ G + D V + + +N + +Y
Sbjct: 125 YDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYT 184
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G + ++ + P+ V++ ++ + KE LELF+ M I D+ + +
Sbjct: 185 KCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLST 244
Query: 477 LLSACSK-----LCNLALGSSLHGLIKKTEIIS------SDTFVCNMLIDMYGKCGSIGS 525
+L C+K +C+ + G S + K+ ++ D +CN L+DMY K G + S
Sbjct: 245 ILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDS 304
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ +F + +V++W +IS G +++ALE F+ M+ G++PD V I +LTAC
Sbjct: 305 AENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVK 364
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFP---PNAL 642
G V+ G ++F+ M+ P + ++ ++ + EA ++ M F P+
Sbjct: 365 SGDVKVGRQIFDCMS-----SPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRT 419
Query: 643 IWRTFLEGC 651
L C
Sbjct: 420 TLAIILSSC 428
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 173/560 (30%), Positives = 285/560 (50%), Gaps = 38/560 (6%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF++MP ++ V++ +++ + + + LF L L F V+ L + +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
E G +HG V+K G+ + +L++ Y + A ++F ++ +D+VSW +I +
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
AE++ F +ALE + +M V PN TF V+ +C GLQN GK++H V+K E D
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQ 335
++VG L++ Y +C + + A F ++ +++ W+ +I +A S S ++ + ++ +
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
PN+FTFS VL++S + L L H ++ G +V +LM YAK G I
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQ 301
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
++ AL+ +R D VSWN +I + GD
Sbjct: 302 SMELFEALS-------------------------------DRND-VSWNTIIVSYVQLGD 329
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+ L LF M ++ T+ S+L AC+ L L LG +H L KT I D V N
Sbjct: 330 GERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKT-IYGQDVAVGN 388
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
LIDMY KCGSI + +F+ + R+ ++W A+I ++G A++ F M+ KP
Sbjct: 389 ALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKP 448
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D + + VL+AC + G + EG + F M + YG+EP M+HY C+V L+ R G+L +A K
Sbjct: 449 DELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKF 508
Query: 632 ITTMPFPPNALIWRTFLEGC 651
I +PF P+ +IWR L C
Sbjct: 509 IEDIPFEPSVMIWRALLGAC 528
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 163/578 (28%), Positives = 277/578 (47%), Gaps = 56/578 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+RN VSF ++I Y++ +A +F + G E F F +L L +E A+
Sbjct: 6 MPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKL--LVSMEWAE 63
Query: 61 L----QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
L VLK G + ++ F+GTAL+ Y GC+ VF+++ K +V+W +++ +
Sbjct: 64 LGRIVHGCVLKVG-YGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASY 122
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ + + F ++ + +F GV+ Q+ + G+ +H V+K ++ +L
Sbjct: 123 AENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDL 182
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V L+ +Y +C A + F D+ DV+ W+ +I A+S KALE++ +M
Sbjct: 183 YVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRA 242
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PNQ TF V+ + A +++ L K+IH +K L DVFV +AL+ YAKC +E +
Sbjct: 243 FVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQS 302
Query: 297 HLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSS--- 352
F +S++N VSWN +I+ Y ++ L +L+ + E T+S +LR+
Sbjct: 303 MELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATL 362
Query: 353 LAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
A +L LQ+HCL + Y V +L+ YAK G I DA
Sbjct: 363 AALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARF----------------- 405
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+ L+ D VSWN +I + +G E +++F M+ + PD
Sbjct: 406 ---------------MFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDE 450
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKI 529
TFV +LSACS L G +K+ I + + C ++ + G+ G++ +VK
Sbjct: 451 LTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTC--MVWLMGRSGNLDQAVKF 508
Query: 530 FNEMT-DRNVITWTALISALGLNG-------FAQRALE 559
++ + +V+ W AL+ A ++ AQR LE
Sbjct: 509 IEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLE 546
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 137/290 (47%), Gaps = 38/290 (13%)
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
+ F E+ +N VS+ LI GYA + F L L G+ N F F+ VL+ ++ +
Sbjct: 1 MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60
Query: 357 LLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+L H ++++GY + ++ +L+ +Y+ SG +S A
Sbjct: 61 WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAR------------------- 101
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
++ ++ D+VSW +IA+ A N + E LE F MR A P+N+
Sbjct: 102 -------------EVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNF 148
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF +L AC L N G ++H + KT D +V L+++Y +CG + + F +
Sbjct: 149 TFAGVLKACLGLQNFDAGKTVHCSVLKTN-YERDLYVGVGLLELYTRCGDNDDAWRAFGD 207
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
M +VI W+ +IS +G +++ALE F +M P++ +VL A
Sbjct: 208 MPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQA 257
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 163/506 (32%), Positives = 268/506 (52%), Gaps = 49/506 (9%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
IHG ++K GF +L V LVN+Y +C + SA K+F ++ R+V +W T++ ++ +
Sbjct: 80 IHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSH 139
Query: 223 FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSA 282
AL+L+++M +P+ T V+N+C+ LQ+ GK +HA +IK ++ D +G++
Sbjct: 140 PLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNS 199
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPN 341
L FY+K LE A F I K+++SW ++I + S+ +++L G +PN
Sbjct: 200 LSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPN 259
Query: 342 EFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
E+T + VL + L Q+H L I++GY + + S+M Y K G + +A
Sbjct: 260 EYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEA----- 314
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE--- 454
KL +E ++V+WN +IA A D E
Sbjct: 315 ---------------------------QKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDV 347
Query: 455 --------VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
L +F+ + + + PD +TF S+LS CS L L G +HG I K+ +++ D
Sbjct: 348 AAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLA-D 406
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
V L+ MY KCGSI + K F EM R +I+WT++I+ +G +Q+AL+ F +M
Sbjct: 407 VVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRL 466
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
+G KP++V + VL+AC H GL E + FE M + Y ++P MDH+ C++D+ +R G ++
Sbjct: 467 VGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVE 526
Query: 627 EAEKIITTMPFPPNALIWRTFLEGCQ 652
EA ++ M F PN IW + GC+
Sbjct: 527 EAFDVVHKMNFEPNETIWSMLIAGCR 552
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 148/553 (26%), Positives = 269/553 (48%), Gaps = 53/553 (9%)
Query: 40 TQFTFGGLLSCDSLN-PVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVF 98
+ + F L C N E + ++K G F D FV T L+ +Y + G ++ VF
Sbjct: 58 SSYYFPLLQECIDRNLATEARMIHGHIVKTG-FHEDLFVMTFLVNVYSKCGVMESAHKVF 116
Query: 99 EDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLE 158
+++PR+++ W ++++ + ++ + LF +++ + + + V++ S+ Q +E
Sbjct: 117 DNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIE 176
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
FG+Q+H +IK D++ + NSL + Y + + A K FK ++ +DV+SW ++I +
Sbjct: 177 FGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCC 236
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
++ ++L ++ M D + PN+ T V+++C + LG IH+ IK +
Sbjct: 237 DNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSIL 296
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS------------KSSPTS 326
+ ++++ Y KC L A F + N+V+WNA+I G+A KS T+
Sbjct: 297 IKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTA 356
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
+ + +L + G +P+ FTFS VL S+ L+ L E E + G ++ KS
Sbjct: 357 LAMFQKLYRSGMKPDLFTFSSVL--SVCSNLVAL---------EQGEQIHGQII----KS 401
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
G+++D VV + +YN+ G ++ K ++ ++SW +I
Sbjct: 402 GVLAD-------------VVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGF 448
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK--LCNLALGSSLHGLIKKTEIIS 504
A +G ++ L+LF+ MR I P+ TFV +LSACS L + AL L++K I
Sbjct: 449 ARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEAL--YYFELMQKQYNIK 506
Query: 505 S--DTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKF 561
D F C LIDMY + G + + + ++M + N W+ LI+ G + L +
Sbjct: 507 PVMDHFAC--LIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIA--GCRSHGKSDLGFY 562
Query: 562 REMEFLGFKPDRV 574
+ L KP V
Sbjct: 563 AAEQLLKLKPKDV 575
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/499 (24%), Positives = 242/499 (48%), Gaps = 54/499 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P RNV ++ ++++ Y + + AL++F+ M+ G P+ +T G +L +C SL +E G
Sbjct: 119 LPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFG 178
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A ++K + D +G +L Y + L+ + F+ + K +++W S++S
Sbjct: 179 KQVHAYLIKYHI-DFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCD 237
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + F +++ + E + V+ L+ G QIH L IK G+ +L+
Sbjct: 238 NGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILI 297
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-----------AL 227
NS++ +Y +C + A+K+F+ +E ++V+WN +I A+ + + AL
Sbjct: 298 KNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTAL 357
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
++ ++ + P+ TF V++ C+ L G+ IH ++IK+ + DV VG+ALV Y
Sbjct: 358 AMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMY 417
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFS 346
KC +++ A F E+ ++ ++SW ++I G+A L E ++L G +PN+ TF
Sbjct: 418 NKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFV 477
Query: 347 HVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
VL ++ + +GL +AL + + +
Sbjct: 478 GVL-------------------------------SACSHAGLADEALYYFELMQKQYNIK 506
Query: 407 PA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKY 461
P + +Y R G+ E ++ ++ P+ W+++IA C +G K L +
Sbjct: 507 PVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHG--KSDLGFYAA 564
Query: 462 MRAARIYP-DNYTFVSLLS 479
+ ++ P D T+VSLL+
Sbjct: 565 EQLLKLKPKDVETYVSLLN 583
>gi|115486944|ref|NP_001065959.1| Os12g0109800 [Oryza sativa Japonica Group]
gi|113648466|dbj|BAF28978.1| Os12g0109800 [Oryza sativa Japonica Group]
Length = 841
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 192/670 (28%), Positives = 326/670 (48%), Gaps = 54/670 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP RN+VS+ +++SA +R G R F+ MI GF P +F+ +L+ C S+
Sbjct: 48 MPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFSLATMLTACHSMVAHSSN 107
Query: 60 QLQASVLKNGL-----FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+L ++ +G+ ++ FVG++LL +Y +HG + F + K L WN+++
Sbjct: 108 KLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLE 167
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ +GF + + S +A +++ + S G Q+H LVI + +
Sbjct: 168 GYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQWGLGRQLHCLVIHSMLES 227
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V NSLV+MYF+ +A +F+ + +D VSWNT+ A E+ + MS
Sbjct: 228 NTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMS 287
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
PN+ TF ++ +N+ LG I A ++ +V V +A+++ +C L+
Sbjct: 288 RTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLD 347
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A+ F ++ +NIV+WN +I GY S S ++ L L+ +G RP+EFT+S VL
Sbjct: 348 RAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVLS--- 404
Query: 354 AFQLL-------QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
AFQ Q+H +I++ G+ + ++V SL+ + +A AF
Sbjct: 405 AFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKA--------NAAAF----------- 445
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
G ++K++ + ++VSW +I+A +G EV+ LF R
Sbjct: 446 ------------GSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDS 493
Query: 467 I-YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF-VCNMLIDMYGKCGSIG 524
PD + ++L+AC+ + +H L+ KT S+ F V + ++D Y KCG I
Sbjct: 494 TNKPDEFILATVLNACANAALIRHCRCIHSLVLKTG--HSNHFCVASAVVDAYAKCGEIT 551
Query: 525 SSVKIFNEMTD--RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
S+ F ++ + I + +++A +G AL + EM P +A+L+A
Sbjct: 552 SAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSA 611
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H GLV +G F M +YG+ P +Y C+VDLL R G L EA+ +I MPF P
Sbjct: 612 CSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPA 671
Query: 643 IWRTFLEGCQ 652
+WR+ + GC+
Sbjct: 672 VWRSLVNGCR 681
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 156/584 (26%), Positives = 262/584 (44%), Gaps = 61/584 (10%)
Query: 85 YGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
Y R G LD + VF++MP ++LV+W ++VS ++G F ++RS E S
Sbjct: 32 YARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFSL 91
Query: 145 VGVI---HGL--SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
++ H + + L +HG+ ++ G D V +SL+ MY + I +A++ F
Sbjct: 92 ATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAF 151
Query: 200 KDVEIRDVVSWNTIIGALAESENFG-KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
+ +D+ WN ++ S FG A+ L M + P++ T++ + +C+
Sbjct: 152 AHIRNKDLTCWNAMLEGYV-SNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQW 210
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
LG+ +H VI + LE + V ++LVD Y + E A F +I K+ VSWN + G+
Sbjct: 211 GLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGF 270
Query: 319 ASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQL----LQLHCLIIRMGYENYE 373
A ++F LI++ + G++PNE TFS +LR S A + LQ+ L R GY +
Sbjct: 271 AHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNV 330
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
V +++ + GL+ A F +L
Sbjct: 331 LVANAVINMLFRCGLLDRAYGFFCSLTF-------------------------------- 358
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
+IV+WN +IA ++ + LF+ + PD +T+ ++LSA + +
Sbjct: 359 RNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQI 418
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKC-GSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
H +I K + +S FV LI GS+ SS+KI + +++W A+ISA +G
Sbjct: 419 HAIILK-QGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHG 477
Query: 553 FAQRALEKFREMEFLG---FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
+ F F G KPD L VL AC + L+R R S ++
Sbjct: 478 LNDEVIFLFN--LFRGDSTNKPDEFILATVLNACANAALIRHC-----RCIHSLVLKTGH 530
Query: 610 DHYHC----VVDLLVRYGHLKEAEKIITTMPFPPN-ALIWRTFL 648
++ C VVD + G + AE T + N A+++ T L
Sbjct: 531 SNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTML 574
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 16/106 (15%)
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
+ TF N L Y + G + S++K+F+EM RN+++WTA++SA NG F M
Sbjct: 20 AHTFNMNYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSM 79
Query: 565 EFLGFKPDRVALIAVLTACR----------------HGGLVREGME 594
GF P+ +L +LTAC HG VR G++
Sbjct: 80 IRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLD 125
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 188/613 (30%), Positives = 300/613 (48%), Gaps = 45/613 (7%)
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR--KSLVTWNS 111
N ++G L A +LK G + +V L LY + L +++F+ + K V+WNS
Sbjct: 26 NILKGRTLHARILKTGSISS-IYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNS 84
Query: 112 IVSIFGKHGFVEDCMF---LFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLV 167
+++ F ++ F LF ++R+ + + + GV SN D+ G+Q H +
Sbjct: 85 LINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVA 144
Query: 168 IKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKAL 227
+K G ++ V +SL+NMY + ++ A K+F + R+ VSW T+I A S+ KA+
Sbjct: 145 VKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAV 204
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
E++ M + N+ V+++ G+ +H+ IKN L V V +ALV Y
Sbjct: 205 EVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMY 264
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFS 346
AKC +L+ A F +KN ++W+A++ GYA S ++ L ++ G P+EFT
Sbjct: 265 AKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLV 324
Query: 347 HVLRSS----LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
V+ + + Q+H ++G+ YVL +++ YAK G ++DA
Sbjct: 325 GVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADA---------- 374
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
R G +++PD+V W +I NGDY+ L L+ M
Sbjct: 375 --------------RKG--------FECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKM 412
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ R+ P+ T S+L ACS L L G +H I K + + + L MY KCGS
Sbjct: 413 QMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGF-KLEVPIGSALSAMYTKCGS 471
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ IF M R+VI+W A+IS L NG +ALE F +M G KPD V + +L+A
Sbjct: 472 LDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSA 531
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H GLV G E F+ M + + P ++HY C+VD+L R G L EA++ I +
Sbjct: 532 CSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLC 591
Query: 643 IWRTFLEGCQRCR 655
+WR L C+ R
Sbjct: 592 LWRILLGACKNHR 604
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 165/620 (26%), Positives = 296/620 (47%), Gaps = 51/620 (8%)
Query: 3 DRNVVSFNSIISAYSRCGYVED---ALRMFLYMIN-RGFEPTQFTFGGLLSCDS--LNPV 56
D++ VS+NS+I+A+S+ A+ +F M+ P T G+ S S + V
Sbjct: 76 DKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVV 135
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G Q + +K G D +VG++LL +Y + G + + +F+ MP ++ V+W +++S +
Sbjct: 136 AGKQAHSVAVKTGC-SGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGY 194
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ + +F + R E E + V+ L+++ + G Q+H L IKNG +
Sbjct: 195 ASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIV 254
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VAN+LV MY +C + A + F+ ++ ++W+ ++ A+ + KAL+L+ +M
Sbjct: 255 SVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSS 314
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P++ T V VIN+C+ L + GK +H+ K ++V SA+VD YAKC +L A
Sbjct: 315 GVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADA 374
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR-PNEFTFSHVLR--SSL 353
F + ++V W ++I GY L +Q+ PNE T + VLR SSL
Sbjct: 375 RKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSL 434
Query: 354 AF--QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
A Q Q+H II+ G++ E +GS +++
Sbjct: 435 AALDQGKQMHARIIKYGFK-LEVPIGSALSA----------------------------- 464
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y + G ++ + ++ D++SWN +I+ + NG + LELF+ M I PD
Sbjct: 465 --MYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDP 522
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKI 529
TFV+LLSACS + + G ++ I+ + + C ++D+ + G + + +
Sbjct: 523 VTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYAC--MVDILSRAGKLNEAKEF 580
Query: 530 FNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
T D + W L+ A + + + ++ LG P+ A + +L++
Sbjct: 581 IESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELG-SPESSAYV-LLSSIYTALG 638
Query: 589 VREGMELFERMNRSYGVEPE 608
RE +E R+ ++ GV E
Sbjct: 639 DRENVERVRRIMKARGVNKE 658
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/477 (27%), Positives = 242/477 (50%), Gaps = 16/477 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
MP+RN VS+ ++IS Y+ + A+ +F M +F +LS + G
Sbjct: 179 MPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTG 238
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + +KNGL A V AL+ +Y + G LD+ V FE K+ +TW+++V+ + +
Sbjct: 239 RQVHSLAIKNGLL-AIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQ 297
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + LF ++ S V +E + VGVI+ S+ + G+Q+H K GF +L V
Sbjct: 298 GGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYV 357
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+++V+MY +C + A K F+ V+ DVV W +II ++ ++ L LY +M ++ V
Sbjct: 358 LSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERV 417
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+ T V+ +C+ L GK +HA++IK + +V +GSAL Y KC +L+ +L
Sbjct: 418 IPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYL 477
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F + +++++SWNA+I G + L E + L G +P+ TF ++L + L
Sbjct: 478 IFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGL 537
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYA-------KSGLISDALAFVTALNIPRAVVPANI 410
+ +M ++ E+ + ++ YA ++G +++A F+ + + + I
Sbjct: 538 VDRGWEYFKMMFD--EFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRI 595
Query: 411 IAGIYNRTGQYNETV---KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+ G Y V + L +L P+ ++ ++ + GD + V + + M+A
Sbjct: 596 LLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKA 652
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 193/430 (44%), Gaps = 47/430 (10%)
Query: 233 MSVDIVFPNQ-TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
MS+ +FP Q + + C +N + G+++HA+++K ++V + ++ YAK +
Sbjct: 1 MSLPKIFPPQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTN 60
Query: 292 NLEGAHLCFSEI--SNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR-----PNEFT 344
+L A F I ++K+ VSWN+LI ++ S +S I L + R PN T
Sbjct: 61 HLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHT 120
Query: 345 FSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
+ V ++ + Q H + ++ G YV SL+ Y K+G + DA
Sbjct: 121 LAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDAR------- 173
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
KL ++ + VSW +I+ A + + +E+F+
Sbjct: 174 -------------------------KLFDRMPERNTVSWATMISGYASSDIADKAVEVFE 208
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
MR + + S+LSA + + G +H L K +++ + V N L+ MY KC
Sbjct: 209 LMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVS-VANALVTMYAKC 267
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
GS+ +V+ F D+N ITW+A+++ G + +AL+ F +M G P L+ V+
Sbjct: 268 GSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVI 327
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
AC V EG ++ G ++ VVD+ + G L +A K + P+
Sbjct: 328 NACSDLCAVVEGKQM-HSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQ-QPD 385
Query: 641 ALIWRTFLEG 650
++W + + G
Sbjct: 386 VVLWTSIITG 395
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 193/681 (28%), Positives = 335/681 (49%), Gaps = 55/681 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE-GA--QL 61
++VS+N++ISA G DA+ +F + G P T +L+ + + V+ GA +
Sbjct: 298 DLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKF 357
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIVSIFGKHG 120
+ ++G + D VG A++ +Y + G +VF + K +++WN+++
Sbjct: 358 HGRIWESG-YLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRK 416
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY-ELLVA 179
+ F ++ + + + SF+ +++ SN + L+FG +IH L++ DY E VA
Sbjct: 417 SFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVA 476
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEI--RDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
LV+MY +C I AE +FK++ + R +V+WN ++GA A+++ +A + M
Sbjct: 477 TMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGG 536
Query: 238 VFPNQTTFVYVINSCAGLQNS-ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+ +F V++SC Q + +L I ++A + +AL+ + +C LE A
Sbjct: 537 VLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSAC-----LETALISMHGRCRELEQA 591
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF 355
F E+ + ++VSW A++ A + L +QL G P++FT + L + L
Sbjct: 592 RSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDS 651
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L L +I A VT + + + N + +Y
Sbjct: 652 TTLGLGKII----------------------------HACVTEIGLEADIAVENALLNMY 683
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G + E + ++ D+VSWNI+ AA A G KE + LF++M+ + PD TF
Sbjct: 684 SNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFS 743
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
+ L+ ++ G HGL ++ + SD V L+ +Y KCG + ++ +F
Sbjct: 744 TTLNVSGGSALVSDGKLFHGLAAESGL-DSDVSVATGLVKLYAKCGKLDEAISLFRGACQ 802
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
V+ A+I AL +GF++ A++ F +M+ G +PD L+++++AC H G+V EG
Sbjct: 803 WTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSS 862
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC---- 651
F M +G+ P ++HY C VDLL R G L+ AE+II MPF N L+W + L C
Sbjct: 863 FLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQG 922
Query: 652 -----QRC--RIAKYDTLNST 665
+RC RI + D NS
Sbjct: 923 DAELGERCAQRILELDPHNSA 943
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 151/569 (26%), Positives = 265/569 (46%), Gaps = 54/569 (9%)
Query: 33 INRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLD 92
++R + ++T L SC N + + ++ N F+G L+ +Y R G L+
Sbjct: 19 VDRAADLQEYT-ALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLE 77
Query: 93 EVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF-CELVRSEVALTESSFVGVIHGL 151
E ++F M +++V+W +++S + G LF L+ S A + V +++
Sbjct: 78 EAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNAC 137
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYE----LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
+N +DL G IH ++ + G + E LV N+++NMY +C A +F + +DV
Sbjct: 138 ANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDV 197
Query: 208 VSWNTIIGALAESENF-GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
VSW + GA A+ F AL ++ M + + PN TF+ + +C L++ G +H+
Sbjct: 198 VSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHS 254
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK---NIVSWNALILGYASKSS 323
+ + L D G+AL++ Y KC + EGA+ F ++++ ++VSWNA+I
Sbjct: 255 LLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGR 314
Query: 324 PTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL-----LQLHCLIIRMGYENYEYVLG 377
+ L+L G RPN T +L + A + + H I GY
Sbjct: 315 HGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGY-------- 366
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDI 436
R VV N I +Y + G ++ + ++ + D+
Sbjct: 367 ------------------------LRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDV 402
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
+SWN ++ A + +V+ F +M A I P+ +F+++L+ACS L G +H L
Sbjct: 403 ISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSL 462
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM--TDRNVITWTALISALGLNGFA 554
I ++ V ML+ MYGKCGSI + +F EM R+++TW ++ A N +
Sbjct: 463 ILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRS 522
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ A EM G PD ++ +VL++C
Sbjct: 523 KEAFGALMEMLQGGVLPDALSFTSVLSSC 551
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 159/656 (24%), Positives = 298/656 (45%), Gaps = 63/656 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLLS--CDSLNPVE 57
M +RNVVS+ ++ISA ++ G A +F M + P +T +L+ +S +
Sbjct: 86 MEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAI 145
Query: 58 GAQLQASVLKNGL---FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
G + A + + GL VG A++ +Y + G ++ ++VF +P K +V+W ++
Sbjct: 146 GRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAG 205
Query: 115 IFGK-HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
+ + F D + +F E++ +A +F+ + ++ +D G +H L+ + G
Sbjct: 206 AYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEAGLG 262
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIR---DVVSWNTIIGALAESENFGKALELY 230
++ L N+L+NMY +C A +FK + R D+VSWN +I A E+ G A+ ++
Sbjct: 263 FDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIF 322
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAK 289
R+ ++ + PN T + ++N+ A + H ++ ++ DV VG+A++ YAK
Sbjct: 323 RRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAK 382
Query: 290 CDNLEGAHLCFSEISNK-NIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSH 347
C A F I K +++SWN ++ + S + +L G PN+ +F
Sbjct: 383 CGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIA 442
Query: 348 VLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTS-YAKSGLISDALAFVTALNIP 402
+L + + L ++H LI+ + E + +++ S Y K G I++A + +P
Sbjct: 443 ILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLP 502
Query: 403 -RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
R++V +WN+++ A A N KE
Sbjct: 503 SRSLV-------------------------------TWNVMLGAYAQNDRSKEAFGALME 531
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC--NMLIDMYGK 519
M + PD +F S+LS+C C S +++ + S C LI M+G+
Sbjct: 532 MLQGGVLPDALSFTSVLSSC--YC-----SQEAQVLRMCILESGYRSACLETALISMHGR 584
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
C + + +F+EM +V++WTA++SA N + FR M+ G PD+ L
Sbjct: 585 CRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATT 644
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
L C + G ++ G+E ++ + ++++ G +EA TM
Sbjct: 645 LDTCLDSTTLGLG-KIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETM 699
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 144/532 (27%), Positives = 251/532 (47%), Gaps = 51/532 (9%)
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
VR + A + ++ + DL G++ H L+ G + L + N L+NMY +C +
Sbjct: 17 VRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSL 76
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINS 251
A +F +E R+VVSW +I A A+S F +A L+ M ++ PN T V ++N+
Sbjct: 77 EEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNA 136
Query: 252 CAGLQNSILGKSIHAKVIKNALECD----VFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
CA ++ +G+SIHA + + LE + VG+A+++ YAKC + E A F I K+
Sbjct: 137 CANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKD 196
Query: 308 IVSWNALILGYASKSS--PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLII 365
+VSW A+ YA + P ++ + E+L PN TF L + C +
Sbjct: 197 VVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGA----------CTSL 246
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET- 424
R G L SL+ ++GL D LA N + +Y + G +
Sbjct: 247 RDGT-----WLHSLLH---EAGLGFDPLA-------------GNALINMYGKCGDWEGAY 285
Query: 425 --VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA-C 481
K ++ + D+VSWN +I+A G + + + +F+ +R + P++ T +++L+A
Sbjct: 286 GVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALA 345
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVIT 540
+ + HG I ++ + D V N +I MY KCG ++ +F + + +VI+
Sbjct: 346 ASGVDFGAARKFHGRIWESGYL-RDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVIS 404
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM- 599
W ++ A + + F M G P++V+ IA+L AC + + G ++ +
Sbjct: 405 WNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLIL 464
Query: 600 --NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI-WRTFL 648
R Y VE + +V + + G + EAE + MP P +L+ W L
Sbjct: 465 TRRRDY-VESSVATM--LVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVML 513
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 172/352 (48%), Gaps = 4/352 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
+P R++V++N ++ AY++ ++A + M+ G P +F +LS E
Sbjct: 501 LPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLS-SCYCSQEAQV 559
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L+ +L++G A + TAL+ ++GR L++ SVF++M +V+W ++VS ++
Sbjct: 560 LRMCILESGY--RSACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENR 617
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
++ LF + V + + + + L G+ IH V + G + ++ V N
Sbjct: 618 DFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVEN 677
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L+NMY C A F+ ++ RD+VSWN + A A++ +A+ L+ M ++ V P
Sbjct: 678 ALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKP 737
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
++ TF +N G GK H ++ L+ DV V + LV YAKC L+ A F
Sbjct: 738 DKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLF 797
Query: 301 SEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
+V NA+I A S ++ + ++ Q G RP+ T ++ +
Sbjct: 798 RGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISA 849
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 110/220 (50%), Gaps = 7/220 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
M R++VS+N + +AY++ G ++A+ +F +M G +P + TF L+ + + +G
Sbjct: 699 MKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDG 758
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++GL +D V T L+ LY + G LDE +S+F + ++V N+I+ +
Sbjct: 759 KLFHGLAAESGLD-SDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQ 817
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HGF E+ + +F ++ + V ++ V +I + +E G L +K F +
Sbjct: 818 HGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSF-LTMKEYFGISPTL 876
Query: 179 AN--SLVNMYFQCAGIWSAEKMFKDVEIRD-VVSWNTIIG 215
+ V++ + + AE++ + + D + W +++G
Sbjct: 877 EHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLG 916
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 190/663 (28%), Positives = 320/663 (48%), Gaps = 55/663 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M DR+VV +N+++ Y G E+A+ + M P T LL +C+ + + G
Sbjct: 121 MSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLG 180
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ L+NG+F ++ V TAL+G Y R + + +F+ M +++V+WN+++S +
Sbjct: 181 RGVHGYCLRNGMFDSNPHVATALIGFYLRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYD 239
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + LF +++ EV + + + + L+ G+QIH L IK F +L +
Sbjct: 240 VGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYI 299
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+NMY + S+ ++F+ V RD WN++I A A +A++L++RM + V
Sbjct: 300 LNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGV 359
Query: 239 FPNQTTFVYVINSCAGLQNSIL-GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
++ T V +++ C L + +L GKS+HA VIK+ + D +G+AL+ Y + + +E
Sbjct: 360 KKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQ 419
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQ 356
F + +I+SWN +IL A + L E ++ +PN +T +L +
Sbjct: 420 KIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVT 479
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L G + Y I TAL A +Y
Sbjct: 480 CLD----------------FGRSIHGYVMKHSIEINQPLRTAL------------ADMYM 511
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
G L D++SWN +I + P++ T ++
Sbjct: 512 NCGDEATARDLFEGCPDRDLISWNAMI---------------------XKAEPNSVTIIN 550
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEI-ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
+LS+ + L L G SLH + + + D + N I MY +CGS+ S+ IF +
Sbjct: 551 VLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPK 610
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
RN+I+W A+I+ G+NG A+ F +M GF+P+ V ++VL+AC H G + G++L
Sbjct: 611 RNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQL 670
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
F M + + V PE+ HY C+VDLL R G + EA + I +MP P+A +WR L C+
Sbjct: 671 FHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYS 730
Query: 656 IAK 658
AK
Sbjct: 731 DAK 733
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 173/652 (26%), Positives = 298/652 (45%), Gaps = 67/652 (10%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVL 66
+NS+I + + L + M + G P T +L +C + N VE G + S+
Sbjct: 28 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 87
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
L D VGTA++ Y + G +++ VF+ M + +V WN++V + G E+ M
Sbjct: 88 GTDLM-DDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAM 146
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELLVANSLVNM 185
L E+ R + + V ++ +L G +HG ++NG FD VA +L+
Sbjct: 147 LLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGF 206
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y + + +F + +R++VSWN +I + ++ KALEL+++M VD V + T
Sbjct: 207 YLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTM 265
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
+ + +CA L + LGK IH IK D+++ +AL++ Y+ +LE +H F + N
Sbjct: 266 LVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPN 325
Query: 306 KNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLR--SSLAFQLLQ--- 359
++ WN++I YA+ ++ L I + G + +E T +L LA LL+
Sbjct: 326 RDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKS 385
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
LH +I KSG+ DA N + +Y
Sbjct: 386 LHAHVI-------------------KSGMRIDASL-------------GNALLSMYTELN 413
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
K+ +++ DI+SWN +I A A N + ELF+ MR + I P++YT +S+L+
Sbjct: 414 CVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILA 473
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
AC + L G S+HG + K I + + L DMY CG ++ +F DR++I
Sbjct: 474 ACEDVTCLDFGRSIHGYVMKHS-IEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLI 532
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W A+I +P+ V +I VL++ H + +G L +
Sbjct: 533 SWNAMIXKA---------------------EPNSVTIINVLSSFTHLATLPQGQSLHAYV 571
Query: 600 N-RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
R + + ++ + + + R G L+ AE I T+P N + W + G
Sbjct: 572 TRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP-KRNIISWNAMIAG 622
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 153/574 (26%), Positives = 273/574 (47%), Gaps = 63/574 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL----SCDSLNPVE-G 58
RN+VS+N++IS Y G AL +F+ M+ + +F +L +C L ++ G
Sbjct: 225 RNIVSWNAMISGYYDVGDYFKALELFVQML---VDEVKFDCVTMLVAVQACAELGSLKLG 281
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K F D ++ ALL +Y +G L+ +FE +P + WNS++S +
Sbjct: 282 KQIHQLAIKFE-FVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAA 340
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE--QDLEFGEQIHGLVIKNGFDYEL 176
G E+ M LF + V E + V ++ + E L G+ +H VIK+G +
Sbjct: 341 FGCHEEAMDLFIRMQSEGVKKDERTVV-IMLSMCEELASGLLKGKSLHAHVIKSGMRIDA 399
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ N+L++MY + + S +K+F ++ D++SWNT+I ALA + +A EL+ RM
Sbjct: 400 SLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRES 459
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ PN T + ++ +C + G+SIH V+K+++E + + +AL D Y C + A
Sbjct: 460 EIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATA 519
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F +++++SWNA+I K+ P S+ +I +L +F+H+ + Q
Sbjct: 520 RDLFEGCPDRDLISWNAMI----XKAEPNSV-TIINVLS--------SFTHL---ATLPQ 563
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL-ISDALAFVTALNIPRAVVPANIIAGIY 415
LH + R G+ GL +S A AF+T +Y
Sbjct: 564 GQSLHAYVTRRGF---------------SLGLDLSLANAFIT----------------MY 592
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
R G + L + +I+SWN +IA NG + + F M P+ TFV
Sbjct: 593 ARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFV 652
Query: 476 SLLSACSKLCNLALGSSL-HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S+LSACS + +G L H +++ ++ + + ++D+ + G I + + + M
Sbjct: 653 SVLSACSHSGFIEMGLQLFHSMVQDFN-VTPELVHYSCIVDLLARGGCIDEAREFIDSMP 711
Query: 535 -DRNVITWTALISALGLNGFAQRALEKFREMEFL 567
+ + W AL+S+ A++A F +++ L
Sbjct: 712 IEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKL 745
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 193/409 (47%), Gaps = 46/409 (11%)
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI-L 260
++I+D WN++I A +N L Y +M V PN TT V+ +CA QN++
Sbjct: 20 IQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAA-QNAVER 78
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
GKSIH + L DV VG+A+VDFY KC +E A F +S++++V WNA++ GY
Sbjct: 79 GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 138
Query: 321 KSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
LL+ E+ + RPN R+ +A L +R+G + Y L
Sbjct: 139 WGCYEEAMLLVREMGRENLRPNS-------RTMVALLLACEGASELRLGRGVHGYCL--- 188
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVS 438
++G+ TAL G Y R + LL L +IVS
Sbjct: 189 -----RNGMFDSNPHVATAL------------IGFYLRFDM--RVLPLLFDLMVVRNIVS 229
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
WN +I+ GDY + LELF M + D T + + AC++L +L LG +H L
Sbjct: 230 WNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAI 289
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
K E + D ++ N L++MY GS+ SS ++F + +R+ W ++ISA G + A+
Sbjct: 290 KFEFV-EDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAM 348
Query: 559 EKFREMEFLGFKPDRVALIAVLTACR------------HGGLVREGMEL 595
+ F M+ G K D ++ +L+ C H +++ GM +
Sbjct: 349 DLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRI 397
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 12/176 (6%)
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
++++ D WN VI A+ + + +L + M + + P+N T +L AC+ +
Sbjct: 18 TKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVE 77
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G S+H I+ T+++ D V ++D Y KCG + + +F+ M+DR+V+ W A++
Sbjct: 78 RGKSIHRSIQGTDLM-DDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGY 136
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-----------HGGLVREGM 593
G + A+ REM +P+ ++A+L AC HG +R GM
Sbjct: 137 VGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGM 192
>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
Length = 806
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 181/661 (27%), Positives = 337/661 (50%), Gaps = 42/661 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPV-EG 58
MPDR +N ++ + D L ++ M +P+ F +++C + + +G
Sbjct: 111 MPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQG 170
Query: 59 AQLQASVLK-NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+ V G+ ++ + +AL+ +Y + G +D ++ F+D WN+I+S
Sbjct: 171 RSIHYRVATGRGI---NSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALA 227
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + LF ++ + + ++ S + + L G QIH + +L
Sbjct: 228 GAGHHRRAIELFFQMEQHQC--SDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVL 285
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+L++MY +C + A ++F D+ R+VVSW ++I A+A++ ++ +++L+ M +
Sbjct: 286 VLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEG 345
Query: 238 VFPNQTTFVYVINSCAGL-QNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ PN+ T+ V+++ A L +++IL G+ IH+++ + ++ D V ++L++ YA+ L
Sbjct: 346 INPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLA 405
Query: 295 GAHLCFSEI--SNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRS 351
A F I ++K +VS+ +I YA P ++ + E+ G PNE TF+ VL +
Sbjct: 406 EAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAA 465
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+A L I +E ++ S + S SD A+ N +
Sbjct: 466 CVAIGDLASGAWI-------HERMIESGLDS-------SDPFAY-------------NSL 498
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y + G ++ ++ D+V+W +IAA +G+ + L+L+ M + I+PD
Sbjct: 499 VDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDI 558
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
T +LL AC+ L +LA+G +H ++++ D N L MY KCGS+ + +++
Sbjct: 559 ATLSTLLVACANLGDLAMGEKIHRQALRSKL-EQDAHFQNALAAMYAKCGSLEKATRLYR 617
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+V TWT++++A G A ALE + EME G +P+ V I VL +C GLV E
Sbjct: 618 RCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAE 677
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G E F + YG +P +H+ C+VD+L R G L++AE+++ +MPF P+ + W++ L C
Sbjct: 678 GREFFHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSC 737
Query: 652 Q 652
+
Sbjct: 738 K 738
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 150/582 (25%), Positives = 275/582 (47%), Gaps = 43/582 (7%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ A ++ L +A +G + +Y R C D +++F+ MP + WN ++ F
Sbjct: 69 GRRVHAHIVSRRL-ARNALLGELVFQMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFL 127
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
D + L+ + + F+ I +DL G IH + G
Sbjct: 128 AADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSIH-YRVATGRGINSS 186
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ ++LV MY QC I A F D WN I+ ALA + + +A+EL+ +M
Sbjct: 187 IQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFFQMEQHQ 246
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ + + +CA + G IH K+ V V +AL+ Y +C L+ A
Sbjct: 247 C--SDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEAL 304
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTF-------SHVL 349
F+++ ++N+VSW ++I A + S+ L ++ G PNE T+ +H+
Sbjct: 305 RVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGINPNEKTYASVVSAIAHLG 364
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
R ++ + ++H I G + V SL+ YA+SGL+++A
Sbjct: 365 RDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEARE--------------- 409
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+++ + ++TV VS+ +I+A AHNG ++ LE+F+ M A + P
Sbjct: 410 ----VFDSILENSKTV-----------VSFTTMISAYAHNGHPRQALEIFREMTARGVAP 454
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ TF ++L+AC + +LA G+ +H + ++ + SSD F N L+DMY KCG +G + ++
Sbjct: 455 NEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARV 514
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F M ++++ WT +I+A +G + AL+ + M G PD L +L AC + G +
Sbjct: 515 FETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDL 574
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
G ++ + RS +E + + + + + G L++A ++
Sbjct: 575 AMGEKIHRQALRS-KLEQDAHFQNALAAMYAKCGSLEKATRL 615
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/532 (24%), Positives = 232/532 (43%), Gaps = 48/532 (9%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
+ ++ N++ L+ G ++H ++ L+ + MY +C +A +F +
Sbjct: 53 YANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMP 112
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
R WN ++ ++ LELY RMSV+ P+ F++ I +C +++ G+S
Sbjct: 113 DRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRS 172
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL---ILGYAS 320
IH +V + + SALV YA+C ++ A F + WNA+ + G
Sbjct: 173 IHYRV-ATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGH 231
Query: 321 KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM 380
+F +E Q R + +Q+H I + VL +L+
Sbjct: 232 HRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALI 291
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
+ +Y R G+ +E +++ + + ++VSW
Sbjct: 292 S--------------------------------MYVRCGKLDEALRVFADMPHRNVVSWT 319
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL---GSSLHGLI 497
+IAA A G Y ++LF M A I P+ T+ S++SA + L A+ G +H I
Sbjct: 320 SMIAAVAQTGHYSFSVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQI 379
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD--RNVITWTALISALGLNGFAQ 555
+ I +D V N LI+MY + G + + ++F+ + + + V+++T +ISA NG +
Sbjct: 380 TASG-IDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMISAYAHNGHPR 438
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
+ALE FREM G P+ + VL AC G + G + ERM S + Y+ +
Sbjct: 439 QALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSL 498
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL-----EGCQRCRIAKYDTL 662
VD+ + G L A ++ TM + + W T + G R + YD +
Sbjct: 499 VDMYAKCGDLGFAARVFETMK-TKDLVAWTTIIAANVQSGNNRAALDLYDRM 549
>gi|255546193|ref|XP_002514156.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546612|gb|EEF48110.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 885
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 187/628 (29%), Positives = 316/628 (50%), Gaps = 44/628 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
M +R+VVS+ ++I+ Y G D ++ + M P +FT +L S+ + G
Sbjct: 154 MRERDVVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLATVLKASSMCSDIKFG 213
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +K GL D FVG+AL+ LY + G ++ VF MP K+ V+WN++++ + +
Sbjct: 214 KLIHLEAIKTGLL-LDLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYAQ 272
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ + LFC ++ E+ T + V+ G +N +L G+ +H L I+ ++ + +
Sbjct: 273 RGDGKNVLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREGKALHSLSIRRAYELDEFL 332
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LV+MY +C + A K+F +E D+V+W+ II L + + +A EL+ M V
Sbjct: 333 GCNLVDMYSKCGMAYEALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKGV 392
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PNQ +F VI++ + + LG+SIH + K E D VG+AL+ Y K ++
Sbjct: 393 RPNQFSFASVISAATNVGDLYLGQSIHCCICKYGYESDNSVGNALITMYMKSGFVQDGIR 452
Query: 299 CFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F ++N+++VSWNAL+ G Y ++S + + ++L G PN +TF VLRS +
Sbjct: 453 VFDTMTNRDLVSWNALLSGFYDFETSDQGLRIFCQMLMEGLVPNLYTFVGVLRSCSSLLN 512
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIA 412
+ Q+H II+ + ++V +L+ YAK+ + DA +AF
Sbjct: 513 VWFGKQVHAHIIKNSLDGNDFVGTALIDMYAKNRCLEDADVAF----------------- 555
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
++L D+ +W ++IA + ++ ++ M I P+ +
Sbjct: 556 ----------------NKLTNRDLFTWTVIIAGHSQTDKAEKAVKYLGQMLREGIKPNEF 599
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T S LS CS++ L G LH L K+ S D FV + L+DMYGKCG + + IF
Sbjct: 600 TLASCLSGCSRMATLGNGQQLHSLAIKSG-HSGDVFVSSALVDMYGKCGCMEDAEAIFKG 658
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ R+ + W +I +G Q+ALE FR M PD V I VL AC + G V EG
Sbjct: 659 LFSRDTVAWNTIICGYSQHGQGQKALEAFRMMLDEDIDPDEVTFIGVLAACSYMGWVEEG 718
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLV 620
+ F+ M++S E ++ D+L+
Sbjct: 719 KKHFDLMSKSLCSE-QLSQLETSWDILI 745
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 151/525 (28%), Positives = 269/525 (51%), Gaps = 43/525 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
MP++N VS+N++++ Y++ G ++ L++F M+ T +T +L +S N EG
Sbjct: 255 MPEKNNVSWNALLNGYAQRGDGKNVLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREG 314
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L + ++ + D F+G L+ +Y + G E + VF + +V W++I++ +
Sbjct: 315 KALHSLSIRRA-YELDEFLGCNLVDMYSKCGMAYEALKVFNMIEEPDIVAWSAIITGLDQ 373
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ LF + + V + SF VI +N DL G+ IH + K G++ + V
Sbjct: 374 QGHSQEAAELFHLMRQKGVRPNQFSFASVISAATNVGDLYLGQSIHCCICKYGYESDNSV 433
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+ MY + + ++F + RD+VSWN ++ + E + L ++ +M ++ +
Sbjct: 434 GNALITMYMKSGFVQDGIRVFDTMTNRDLVSWNALLSGFYDFETSDQGLRIFCQMLMEGL 493
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN TFV V+ SC+ L N GK +HA +IKN+L+ + FVG+AL+D YAK LE A +
Sbjct: 494 VPNLYTFVGVLRSCSSLLNVWFGKQVHAHIIKNSLDGNDFVGTALIDMYAKNRCLEDADV 553
Query: 299 CFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F++++N+++ +W +I G++ + + ++ L ++L+ G +PNEFT + L
Sbjct: 554 AFNKLTNRDLFTWTVIIAGHSQTDKAEKAVKYLGQMLREGIKPNEFTLASCLSGCSRMAT 613
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L QLH L I+ G+ +V +L+ Y K G + DA A I G
Sbjct: 614 LGNGQQLHSLAIKSGHSGDVFVSSALVDMYGKCGCMEDAEA---------------IFKG 658
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+++R D V+WN +I + +G ++ LE F+ M I PD T
Sbjct: 659 LFSR-----------------DTVAWNTIICGYSQHGQGQKALEAFRMMLDEDIDPDEVT 701
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKK---TEIISSDTFVCNMLID 515
F+ +L+ACS + + G L+ K +E +S ++LID
Sbjct: 702 FIGVLAACSYMGWVEEGKKHFDLMSKSLCSEQLSQLETSWDILID 746
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 171/613 (27%), Positives = 294/613 (47%), Gaps = 44/613 (7%)
Query: 45 GGLLSCDSL-NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR 103
G L C S N EG + +V+K+GL D+ + +L+ LY + G L V M
Sbjct: 98 GMLRECASKGNLNEGTAIHGNVIKSGLE-PDSHLWVSLINLYAKCGSLAFARKVLVGMRE 156
Query: 104 KSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI 163
+ +V+W ++++ + G D + +CE+ + + E + V+ S D++FG+ I
Sbjct: 157 RDVVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLATVLKASSMCSDIKFGKLI 216
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H IK G +L V ++LV++Y + + A+++F + ++ VSWN ++ A+ +
Sbjct: 217 HLEAIKTGLLLDLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYAQRGDG 276
Query: 224 GKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSA 282
L+L+ RM ++ F N T V+ CA N GK++H+ I+ A E D F+G
Sbjct: 277 KNVLKLFCRMLECEMNFTNY-TLSTVLKGCANSGNLREGKALHSLSIRRAYELDEFLGCN 335
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPN 341
LVD Y+KC A F+ I +IV+W+A+I G + L L+ Q G RPN
Sbjct: 336 LVDMYSKCGMAYEALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKGVRPN 395
Query: 342 EFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
+F+F+ V+ ++ L L HC I + GYE+ V +L+T Y KSG + D
Sbjct: 396 QFSFASVISAATNVGDLYLGQSIHCCICKYGYESDNSVGNALITMYMKSGFVQDG----- 450
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
+++ + D+VSWN +++ + L
Sbjct: 451 ---------------------------IRVFDTMTNRDLVSWNALLSGFYDFETSDQGLR 483
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
+F M + P+ YTFV +L +CS L N+ G +H I K + +D FV LIDMY
Sbjct: 484 IFCQMLMEGLVPNLYTFVGVLRSCSSLLNVWFGKQVHAHIIKNSLDGND-FVGTALIDMY 542
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
K + + FN++T+R++ TWT +I+ A++A++ +M G KP+ L
Sbjct: 543 AKNRCLEDADVAFNKLTNRDLFTWTVIIAGHSQTDKAEKAVKYLGQMLREGIKPNEFTLA 602
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
+ L+ C + G +L +S G ++ +VD+ + G +++AE I + F
Sbjct: 603 SCLSGCSRMATLGNGQQLHSLAIKS-GHSGDVFVSSALVDMYGKCGCMEDAEAIFKGL-F 660
Query: 638 PPNALIWRTFLEG 650
+ + W T + G
Sbjct: 661 SRDTVAWNTIICG 673
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 218/445 (48%), Gaps = 38/445 (8%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
+ G++ +++ +L G IHG VIK+G + + + SL+N+Y +C + A K+ +
Sbjct: 96 YSGMLRECASKGNLNEGTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARKVLVGMR 155
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
RDVVSW +I ++ Y M + + PN+ T V+ + + + GK
Sbjct: 156 ERDVVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLATVLKASSMCSDIKFGKL 215
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS 323
IH + IK L D+FVGSALVD YAK +E A F + KN VSWNAL+ GYA +
Sbjct: 216 IHLEAIKTGLLLDLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYAQRGD 275
Query: 324 PTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGS 378
++ L +L+ +T S VL+ L+ LH L IR YE E++ +
Sbjct: 276 GKNVLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREGKALHSLSIRRAYELDEFLGCN 335
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
L+ Y+K G+ +AL K+ + +E PDIV+
Sbjct: 336 LVDMYSKCGMAYEAL--------------------------------KVFNMIEEPDIVA 363
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
W+ +I G +E ELF MR + P+ ++F S++SA + + +L LG S+H I
Sbjct: 364 WSAIITGLDQQGHSQEAAELFHLMRQKGVRPNQFSFASVISAATNVGDLYLGQSIHCCIC 423
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
K SD V N LI MY K G + +++F+ MT+R++++W AL+S + + L
Sbjct: 424 KYG-YESDNSVGNALITMYMKSGFVQDGIRVFDTMTNRDLVSWNALLSGFYDFETSDQGL 482
Query: 559 EKFREMEFLGFKPDRVALIAVLTAC 583
F +M G P+ + VL +C
Sbjct: 483 RIFCQMLMEGLVPNLYTFVGVLRSC 507
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 197/670 (29%), Positives = 326/670 (48%), Gaps = 63/670 (9%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQF--------TFGGLLSCDSLNPV 56
+V N +I + G+ EDA+R++L I GF +F FGGL +
Sbjct: 2 DVSKVNRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVN----- 56
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G Q+ +LK G F D FV +LLG+Y + G V +FE M + V+WN+++S F
Sbjct: 57 KGKQIHGHLLKFG-FLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGF 115
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD---LEFGEQIHGLVIKNGFD 173
+ G + +F +V+ E + + V + LS+ L G +IHG ++K G D
Sbjct: 116 CQSGDYVKSLVMFRRMVK-ECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVD 174
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMF---KDVEI--RDVVSWNTIIGALAESENFGKALE 228
+ + ++L+ MY +C I +AE +F +D E+ R++ WN +I +E ALE
Sbjct: 175 SDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALE 234
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
L++ M + P+ +T V V+ C+ L + +GK IH ++ L+ DV VG+AL++ Y
Sbjct: 235 LFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYF 294
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE--LLQLGYRPNEFTFS 346
KC + E + F N N+V W +++L A P +L G+ P+
Sbjct: 295 KCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGF-PDPVILL 353
Query: 347 HVLRS----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
LR+ SL + + +H I+MG+++ +V G+L+ Y K G + A
Sbjct: 354 AALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYA---------- 403
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
+ G+ R D+VSWN +I+ A N E L+ F+ M
Sbjct: 404 -----QQVFYGLSTR-----------------DLVSWNALISGFAQNKCADEALKAFRDM 441
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
++ +I P+ T +LS C+ L + L +H + + ++ V N LI Y KCG
Sbjct: 442 QSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLR-HWFETNALVNNSLISAYAKCGD 500
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
I SS +F ++ RN +TW +++ G++G F +M+ KPD ++L++
Sbjct: 501 IHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSS 560
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H G V G + F M Y +EP ++ Y C+VDLL R G+L +A +I +MP P+
Sbjct: 561 CSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDR 620
Query: 643 IWRTFLEGCQ 652
IW + L C+
Sbjct: 621 IWGSLLASCK 630
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 151/575 (26%), Positives = 277/575 (48%), Gaps = 54/575 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR---GFEPTQFTFGGLLSCDSLNPV- 56
M +R+ VS+N++IS + + G +L MF M+ + L SC S+ +
Sbjct: 100 MEERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLT 159
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV-----TWNS 111
G ++ ++K G+ +D F+ +AL+ +Y + G + +VFE + LV WN
Sbjct: 160 HGLEIHGFLVKKGVD-SDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNV 218
Query: 112 IVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG 171
++ + + + + LF E++ ++ S+ V V+ S DL G+QIHGL++ G
Sbjct: 219 MILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLG 278
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
D ++ V +L+ MYF+C ++ ++FK + ++V W +++ A++ +ALE +
Sbjct: 279 LDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFS 338
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
+D FP+ + + +C+ L G +IH IK + DVFVG ALVDFY KC
Sbjct: 339 EFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCG 398
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLR 350
++E A F +S +++VSWNALI G+A +K + ++ ++ +PN T + +L
Sbjct: 399 DMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILS 458
Query: 351 --SSLAFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+ L+ +L ++HC ++R +E V SL+++YAK G I +
Sbjct: 459 VCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSS-------------- 504
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
RT + +L + V+WN ++ +G E+ F+ M+ A
Sbjct: 505 ----------RT--------VFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEAN 546
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
I PD+ TF SLLS+CS + G + + + ++D+ G+ G++ +
Sbjct: 547 IKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQA 606
Query: 527 VKIFNEMT----DRNVITWTALISALGLNGFAQRA 557
+ M DR W +L+++ +G + A
Sbjct: 607 YDLIMSMPCSPDDR---IWGSLLASCKNHGNTKLA 638
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 176/658 (26%), Positives = 336/658 (51%), Gaps = 38/658 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYV-EDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEG 58
M ++NVV++N+++ YS G + A+ +F M+ G + TF +L S + +
Sbjct: 119 MAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRK 178
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ S ++ D FV TAL+ Y + G L + VF+ MP +S+ TWNS++S +
Sbjct: 179 GKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSI 238
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ F+F + + +F+ ++ N + L+ G+ + + + F+ +L V
Sbjct: 239 SERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFV 298
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+L+ MY +C A ++F ++ ++++W+ II A A+ + G+AL + M + +
Sbjct: 299 GTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGI 358
Query: 239 FPNQTTFVYVIN---SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
PN+ TF+ ++N + +GL+ IH + ++ L+ + +ALV+ Y +C++ +
Sbjct: 359 LPNRVTFISLLNGFTTPSGLEEL---SRIHLLITEHGLDDTTTMRNALVNVYGRCESPDD 415
Query: 296 AHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F ++ N++SWN++I Y + ++ L + Q G +P+ F +L +
Sbjct: 416 ARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT- 474
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+ H ++ ++ E +SGL L + +N+
Sbjct: 475 ---IGSHGRTRKLVHQCVE-----------ESGLGGSPLVQTSLVNM------------- 507
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y + G+ + +L +++ I +WN++I A +G +E LE ++ ++ I D TF
Sbjct: 508 YAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTF 567
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+S+L+AC+ +LA G +H + + SD V N L +MY KCGS+ ++ +IF+ M
Sbjct: 568 ISVLNACTSSTSLAEGKMIHSNAVECGL-DSDVIVKNALTNMYSKCGSMENARRIFDSMP 626
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
R+ ++W ++ A +G ++ L+ R+ME G K + + ++VL++C H GL+ EG +
Sbjct: 627 IRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQ 686
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F + G+E + +HY C+VDLL R G L+EAEK I+ MP P + W + L C+
Sbjct: 687 YFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACR 744
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 178/659 (27%), Positives = 323/659 (49%), Gaps = 52/659 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQL 61
RNVVS+N +ISAYS ++AL +F M+ G P T +L SC S + +G +
Sbjct: 21 RNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILV 80
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A L+ G F + V TALL +YG+ G L + SVFE+M K++VTWN+++ ++ G
Sbjct: 81 HALSLERGFF-QNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGC 139
Query: 122 V-EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + LF ++ V +F+ V++ + + L G+ IH V ++ ++ V
Sbjct: 140 CWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNT 199
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+LVN Y +C + A K+F + R V +WN++I A + SE G+A ++ RM +
Sbjct: 200 ALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERC 259
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
++ TF+ ++++C + GK + + + + E D+FVG+AL+ YA+C + E A F
Sbjct: 260 DRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVF 319
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS----SLAF 355
+ N+++W+A+I +A ++Q G PN TF +L S
Sbjct: 320 GRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLE 379
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+L ++H LI G ++ T+ ++ L++ +Y
Sbjct: 380 ELSRIHLLITEHGLDD---------TTTMRNALVN-----------------------VY 407
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
R ++ + QLE P+++SWN +I + + L+LF+ M+ I PD F+
Sbjct: 408 GRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFM 467
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
++L AC+ + +H ++++ + S V L++MY K G + + I EM +
Sbjct: 468 TILGACTIGSHGRTRKLVHQCVEESGLGGS-PLVQTSLVNMYAKAGELDVAEVILQEMDE 526
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+ + W LI+ L+G ++ ALE +++++ D+V I+VL AC + EG
Sbjct: 527 QQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEG--- 583
Query: 596 FERMNRSYGVEPEMDH----YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+M S VE +D + + ++ + G ++ A +I +MP +A+ W L+
Sbjct: 584 --KMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPI-RSAVSWNGMLQA 639
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 162/592 (27%), Positives = 286/592 (48%), Gaps = 48/592 (8%)
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
+Y R G L + V+ F + +++V+WN ++S + + ++ + LF ++ VA +
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
V V++ + ++L G +H L ++ GF LVA +L+NMY +C + A+ +F+++
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 204 IRDVVSWNTIIGALA-ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
++VV+WN ++G + + + A+EL+ RM ++ V N TF+ V+NS GK
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SK 321
IH+ V ++ DVFV +ALV+ Y KC +L A F + +++ +WN++I Y+ S+
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIR-----MGYENYEYVL 376
S + F+ + Q G R + TF +L + + + LQ H +R +E +V
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQ-HGKHVRESISETSFELDLFVG 299
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
+L+T YA+ DA A ++ R Q N +
Sbjct: 300 TALITMYARCRSPEDA-------------------AQVFGRMKQTN-------------L 327
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
++W+ +I A A +G E L F+ M+ I P+ TF+SLL+ + L S +H L
Sbjct: 328 ITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLL 387
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
I + + + T N L+++YG+C S + +F+++ N+I+W ++I
Sbjct: 388 ITEHGLDDTTTMR-NALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDD 446
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS-YGVEPEMDHYHCV 615
AL+ FR M+ G +PDRV + +L AC G R + + + S G P + +
Sbjct: 447 ALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQ--TSL 504
Query: 616 VDLLVRYGHLKEAEKIITTMPFPP----NALIWRTFLEGCQRCRIAKYDTLN 663
V++ + G L AE I+ M N LI L G R + Y L
Sbjct: 505 VNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQ 556
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/544 (29%), Positives = 288/544 (52%), Gaps = 9/544 (1%)
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
+ +V K G + + + + ++V + + S++ ++ G N + L + +H +I+
Sbjct: 33 DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92
Query: 170 NGFD-YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
F+ ++ + N LV++Y + + A ++F ++ +++VVSW +I A A E+ +AL
Sbjct: 93 TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALG 152
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
+ M + PN TF ++ +C L+ +LG+ H +++K E +VFVG+ LVD YA
Sbjct: 153 FFYEMQDVGIQPNHFTFASILPACTDLE--VLGE-FHDEIVKGGFESNVFVGNGLVDMYA 209
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
K +E A F ++ +++VSWNA+I GY I ++L Q + + T++ +
Sbjct: 210 KRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGL---IEDALKLFQEIPKRDVITWNTM 266
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ ++ + E +++ Y ++G + +A + R V+
Sbjct: 267 MAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMP-ERNVISW 325
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N + + + GQ E +KL + ++VSWN +IA + NG + L+LF M+ +
Sbjct: 326 NAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMK 385
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P+ TF +L AC+ L L G+ H ++ ++ SD V N L+ MY KCGSI + K
Sbjct: 386 PNTETFAIVLPACAALAVLEQGNEAHEVVIRSGF-QSDVLVGNTLVGMYAKCGSIEDARK 444
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F+ M ++ + +A+I +NG ++ +LE F +M+F G KPDRV + VL+AC H GL
Sbjct: 445 VFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGL 504
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
V EG + F+ M R Y + P M+HY C++DLL R G EA +I MP P+A +W + L
Sbjct: 505 VDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLL 564
Query: 649 EGCQ 652
C+
Sbjct: 565 SACR 568
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 233/476 (48%), Gaps = 57/476 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP +NVVS+ ++I+AY+R + ++AL F M + G +P FTF +L +C L +
Sbjct: 126 MPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVL--G 183
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ ++K G F ++ FVG L+ +Y + GC++ +F+ MP++ +V+WN++++ + ++
Sbjct: 184 EFHDEIVKGG-FESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQN 242
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ------------IHGLV 167
G +ED + LF E+ + +V + G E +E E+ I G V
Sbjct: 243 GLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYV 302
Query: 168 ----IKNGF-------DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
+K F + ++ N++++ + Q + A K+FK + +VVSWN +I
Sbjct: 303 QNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAG 362
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+++ AL+L+ +M + + PN TF V+ +CA L G H VI++ + D
Sbjct: 363 YSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSD 422
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
V VG+ LV YAKC ++E A F + ++ S +A+I+GYA L E +Q
Sbjct: 423 VLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQF 482
Query: 337 -GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
G +P+ TF VL + H ++ G + ++ +MT +
Sbjct: 483 TGLKPDRVTFVGVLSAC-------CHAGLVDEGRQYFD-----IMTRF------------ 518
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC-AHN 449
+I A+ + + R G ++E L++++ +PD W +++AC HN
Sbjct: 519 ---YHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHN 571
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 140/567 (24%), Positives = 256/567 (45%), Gaps = 62/567 (10%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQL-QASVLK 67
+ ++ + + G + +AL + M+ G P T+ LL C + + A+L A +++
Sbjct: 33 DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92
Query: 68 NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMF 127
C D +G L+ +Y + G L E VF++MP K++V+W ++++ + +H ++ +
Sbjct: 93 TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALG 152
Query: 128 LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYF 187
F E+ + +F ++ + DLE + H ++K GF+ + V N LV+MY
Sbjct: 153 FFYEMQDVGIQPNHFTFASILPACT---DLEVLGEFHDEIVKGGFESNVFVGNGLVDMYA 209
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFV 246
+ I A ++F + RDVVSWN +I ++ AL+L+ + D++ N
Sbjct: 210 KRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAG 269
Query: 247 YVINSCAGLQNSI-----------------LGKSIHAKVIKNAL-------ECDVFVGSA 282
Y C ++N++ + + +K A E +V +A
Sbjct: 270 YA--QCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNA 327
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPN 341
++ +A+ +E A F + N+VSWNA+I GY+ + L +Q+ +PN
Sbjct: 328 VISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPN 387
Query: 342 EFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
TF+ VL + A +L+ G E +E V+ +SG SD L
Sbjct: 388 TETFAIVLPACAALAVLE-------QGNEAHEVVI--------RSGFQSDVLV------- 425
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
N + G+Y + G + K+ ++ + D S + +I A NG KE LELF+
Sbjct: 426 ------GNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQ 479
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M+ + PD TFV +LSAC + G ++ + I+ +ID+ G+ G
Sbjct: 480 MQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAG 539
Query: 522 SIGSSVKIFNEMTDR-NVITWTALISA 547
+ + N+M + + W +L+SA
Sbjct: 540 CFDEANDLINKMPIKPDADMWGSLLSA 566
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 42/247 (17%)
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
++ + G +E L + + M I+P + T+ SLL C +L LH + +T+
Sbjct: 35 LVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQ 94
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
D + N L+ +Y K GS+ + ++F+EM +NV++WTA+I+A + Q AL F
Sbjct: 95 FECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFF 154
Query: 562 REMEFLGFKPDRVALIAVLTACR--------HGGLVREGM-------------------- 593
EM+ +G +P+ ++L AC H +V+ G
Sbjct: 155 YEMQDVGIQPNHFTFASILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCI 214
Query: 594 ----ELFERMNRSYGVEPEMD--HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
ELF++M P+ D ++ ++ V+ G +++A K+ +P + + W T
Sbjct: 215 EFARELFDKM-------PQRDVVSWNAMIAGYVQNGLIEDALKLFQEIP-KRDVITWNTM 266
Query: 648 LEGCQRC 654
+ G +C
Sbjct: 267 MAGYAQC 273
>gi|302762633|ref|XP_002964738.1| hypothetical protein SELMODRAFT_583 [Selaginella moellendorffii]
gi|300166971|gb|EFJ33576.1| hypothetical protein SELMODRAFT_583 [Selaginella moellendorffii]
Length = 644
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/609 (28%), Positives = 307/609 (50%), Gaps = 13/609 (2%)
Query: 52 SLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS---LVT 108
S + G Q+ AS+ ++ D VG L+ +Y + G L + VF + S LV
Sbjct: 8 SKDLARGRQIHASIARSSA-PQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETSVVNLVA 66
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
W ++++ + ++G + + LF ++ + + V + N ++LE G++IH +
Sbjct: 67 WTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGKKIHAYLS 126
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
N ++++ +SL+ MY +C + A MF+ +E + V+WN+++GA + + A+E
Sbjct: 127 CNS---DVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFVQHDRVEAAME 183
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
LY M P++ TF+ V+ + + L++ GK +H +++ E DV V +ALV+ Y
Sbjct: 184 LYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQTALVNMYG 243
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSH 347
KC ++ A F + +++ W+A+I + + + L +QL G RPN T
Sbjct: 244 KCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVS 303
Query: 348 VLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
VL + Q L+ +H ++ GYE V ++++ Y K G + DA +
Sbjct: 304 VLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRN 363
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
V N + +Y R G + + L + D V+WN +++ ++ ++LF+ M
Sbjct: 364 GVPIGNALISMYGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQML 423
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
PD T +++L+ C+ L L G ++ + T + S++ + N +++MY KCGS
Sbjct: 424 QEGTPPDKVTILTVLNVCASLPALQEGKAICAWLDHTPL-SANQMIGNAILNMYAKCGSR 482
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ +IF+ M R+ ++W ALI A G + A + F+ M+ G PD V +L+ C
Sbjct: 483 DEARRIFSVMQGRDAVSWNALIGAYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVC 542
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
HGGL+ E ++ F M Y VE E HY C+VDLL R G + EAE++ MP + ++
Sbjct: 543 SHGGLLGEAVKWFRWMREDYYVEAETGHYGCIVDLLGRLGRVPEAEEVAEKMPAGTDPIV 602
Query: 644 WRTFLEGCQ 652
W T L CQ
Sbjct: 603 WTTLLSACQ 611
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 150/577 (25%), Positives = 287/577 (49%), Gaps = 25/577 (4%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQ 62
N+V++ ++I+AY+R G + A+R+F M G P + T + + N +G ++
Sbjct: 63 NLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGKKIH 122
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
A + N +D +G++L+ +YG+ G L E +F+ M + V WNS++ F +H V
Sbjct: 123 AYLSCN----SDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFVQHDRV 178
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
E M L+ E+++ + +F+ V+ +S+ + L G+ +H +++ G + +++V +L
Sbjct: 179 EAAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQTAL 238
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
VNMY +C + A ++F + DV+ W+ +I A + ++L L+ +M ++ PN
Sbjct: 239 VNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNN 298
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T V V+++C G Q GK IH V++ E D+ VG+A+V Y KC +LE A F
Sbjct: 299 VTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHR 358
Query: 303 ISNKNIVS-WNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL---- 357
+ +N V NALI Y S L + + + T++ ++ S++ QL
Sbjct: 359 VPRRNGVPIGNALISMYGRCGSFGKARDLFDSMA---ERDAVTWNTMM--SVSEQLEHGR 413
Query: 358 --LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN-IPRAV--VPANIIA 412
+QL +++ G + + +++ A + + A L+ P + + N I
Sbjct: 414 DSIQLFRQMLQEGTPPDKVTILTVLNVCASLPALQEGKAICAWLDHTPLSANQMIGNAIL 473
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G +E ++ S ++ D VSWN +I A + ++F+ M+ PD
Sbjct: 474 NMYAKCGSRDEARRIFSVMQGRDAVSWNALIGAYGSYSRGRYAFQIFQAMQLEGSTPDAV 533
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF ++LS CS L +++ + ++T ++D+ G+ G + + ++ +
Sbjct: 534 TFTTILSVCSHGGLLGEAVKWFRWMREDYYVEAETGHYGCIVDLLGRLGRVPEAEEVAEK 593
Query: 533 M-TDRNVITWTALISALGLNGFAQ---RALEKFREME 565
M + I WT L+SA ++G Q RA E+ E++
Sbjct: 594 MPAGTDPIVWTTLLSACQVHGETQRGKRAAERLVELD 630
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 136/523 (26%), Positives = 243/523 (46%), Gaps = 75/523 (14%)
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK---DVEIRDVV 208
S +DL G QIH + ++ + +V N L+ MY +C + A ++F + + ++V
Sbjct: 6 SRSKDLARGRQIHASIARSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETSVVNLV 65
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
+W +I A A + A+ L+ +M ++ P++ T V + +C +N GK IHA +
Sbjct: 66 AWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGKKIHAYL 125
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSI 327
N+ DV +GS+L+ Y KC +L A L F + N V+WN+L+ + ++
Sbjct: 126 SCNS---DVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFVQHDRVEAAM 182
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSY 383
L E+LQ G+ P+ TF VL + + + L+ +H ++ G+E+ V +L+ Y
Sbjct: 183 ELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQTALVNMY 242
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
K G + +A V++ ++ R D++ W+ VI
Sbjct: 243 GKCGSVVEA--------------------------------VEVFDRMPRHDVILWSAVI 270
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH--------- 494
+A + +Y+E L LF+ M+ P+N T VS+LSAC L G +H
Sbjct: 271 SAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYE 330
Query: 495 -GLIKKTEIISS-----------DTF----------VCNMLIDMYGKCGSIGSSVKIFNE 532
LI I+S D F + N LI MYG+CGS G + +F+
Sbjct: 331 GDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRNGVPIGNALISMYGRCGSFGKARDLFDS 390
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
M +R+ +TW ++S + +++ FR+M G PD+V ++ VL C ++EG
Sbjct: 391 MAERDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKVTILTVLNVCASLPALQEG 450
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+ ++ + +M + ++++ + G EA +I + M
Sbjct: 451 KAICAWLDHTPLSANQMIG-NAILNMYAKCGSRDEARRIFSVM 492
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 181/394 (45%), Gaps = 39/394 (9%)
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS---EIS 304
++ C+ ++ G+ IHA + +++ D VG+ L+ Y KC +L A F E S
Sbjct: 1 LLRQCSRSKDLARGRQIHASIARSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETS 60
Query: 305 NKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCL 363
N+V+W ALI YA L + +QL G P+ T + + + L+
Sbjct: 61 VVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGKK 120
Query: 364 IIRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
I N + VLG SL+T Y K G +S+A
Sbjct: 121 IHAYLSCNSDVVLGSSLITMYGKCGSLSEACL---------------------------- 152
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
+ +E + V+WN ++ A + + +EL+ M P TF+++L+A S
Sbjct: 153 ----MFQSMEEWNTVAWNSLMGAFVQHDRVEAAMELYWEMLQCGFLPSRPTFLTVLAAIS 208
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
L +L G +H + + D V L++MYGKCGS+ +V++F+ M +VI W+
Sbjct: 209 SLESLRHGKLVHDTLVEAG-HEDDVVVQTALVNMYGKCGSVVEAVEVFDRMPRHDVILWS 267
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
A+ISA + +L FR+M+ G +P+ V L++VL+AC + G + E + +
Sbjct: 268 AVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVVEA 327
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
G E ++ + +V + + G L++A + +P
Sbjct: 328 -GYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVP 360
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 141/298 (47%), Gaps = 37/298 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP +V+ ++++ISA+ C E++LR+F M G P T +LS C+ +E G
Sbjct: 258 MPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETG 317
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS------------- 105
+ V++ G + D VG A++ +YG+ G L++ VF +PR++
Sbjct: 318 KGIHECVVEAG-YEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRNGVPIGNALISMYG 376
Query: 106 -------------------LVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
VTWN+++S+ + D + LF ++++ + + +
Sbjct: 377 RCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKVTILT 436
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
V++ ++ L+ G+ I + ++ N+++NMY +C A ++F ++ RD
Sbjct: 437 VLNVCASLPALQEGKAICAWLDHTPLSANQMIGNAILNMYAKCGSRDEARRIFSVMQGRD 496
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
VSWN +IGA A +++ M ++ P+ TF +++ C+ +LG+++
Sbjct: 497 AVSWNALIGAYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVCS--HGGLLGEAV 552
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 183/598 (30%), Positives = 297/598 (49%), Gaps = 27/598 (4%)
Query: 82 LGLYGRHGCLDEVVSVFEDM-PRKSLV-TWNSIVSIFGKHGFVEDCMFLFCELVRSEVAL 139
+G Y G E VS+ + + P S V WN+++ K G ++D + +C++ R
Sbjct: 66 VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
+F V+ L G +H +V NG + + NS+V MY +C + A +MF
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185
Query: 200 KDV---EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF---PNQTTFVYVINSCA 253
+V +I D+VSWN+I+ A + AL + RM P+ T V ++ +CA
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACA 245
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+ GK +H ++N L DVFVG+ALV YAKC + A+ F I K++VSWNA
Sbjct: 246 SVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNA 305
Query: 314 LILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMG 368
++ GY+ S S L +++Q + + T+S V+ + F+ L + + G
Sbjct: 306 MVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYG 365
Query: 369 YENYEYVLGSLMTSYAKSGLI-----SDALAFVTALNI-----PRAVVPANIIAGIYNRT 418
E L SL++ A G + + A LN+ ++ N + +Y +
Sbjct: 366 LEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKC 425
Query: 419 GQYNETVKLLSQLERPD--IVSWNIVIAACAHNGDYKEVLELFK--YMRAARIYPDNYTF 474
Y + +E D +V+W ++I A +G+ + L+LF + + + P+ +T
Sbjct: 426 KSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTL 485
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
L AC++L L LG LH + E S +V N LIDMY K G I ++ +F+ M
Sbjct: 486 SCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMK 545
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
RNV++WT+L++ G++G + AL F +M+ LGF D + + VL AC H G+V +GM
Sbjct: 546 LRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMI 605
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M + +G+ P +HY C+VDLL R G L EA ++I M P A++W L +
Sbjct: 606 YFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASR 663
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 150/601 (24%), Positives = 275/601 (45%), Gaps = 88/601 (14%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQ 62
V +N++I + G ++D L + M G+ P +TF +L +C + + GA +
Sbjct: 91 TVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVH 150
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFED-MPRK--SLVTWNSIVSIFGKH 119
A V NGL ++ F+ +++ +YGR G LD+ +F++ + RK +V+WNSI++ + +
Sbjct: 151 AIVCANGL-GSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQG 209
Query: 120 GFVEDCM---FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G + F ++ + V ++ ++ L+ G+Q+HG ++NG ++
Sbjct: 210 GQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDV 269
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS-- 234
V N+LV+MY +C+ + A K+F+ ++ +DVVSWN ++ ++ +F AL L+ M
Sbjct: 270 FVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEE 329
Query: 235 ---VDIVF------------------------------PNQTTFVYVINSCAGLQNSILG 261
+D++ PN T +++ CA + + G
Sbjct: 330 DIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYG 389
Query: 262 KSIHAKVIKNAL-------ECDVFVGSALVDFYAKCDNLEGAHLCFSEI--SNKNIVSWN 312
K HA VIKN L E D+ V + L+D YAKC + A F I +KN+V+W
Sbjct: 390 KQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWT 449
Query: 313 ALILGYASKSSPT---SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGY 369
+I GYA +F I + +PN FT S L + R+G
Sbjct: 450 VMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMAC------------ARLG- 496
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
E LG + +YA + N + N + +Y+++G + +
Sbjct: 497 ---ELRLGRQLHAYA-----------LRNENESEVLYVGNCLIDMYSKSGDIDAARAVFD 542
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
++ ++VSW ++ +G +E L LF M+ D TF+ +L ACS +
Sbjct: 543 NMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQ 602
Query: 490 GS-SLHGLIKKTEII-SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALIS 546
G H ++K I ++ + C ++D+ G+ G + ++++ M+ + + W AL+S
Sbjct: 603 GMIYFHDMVKGFGITPGAEHYAC--MVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLS 660
Query: 547 A 547
A
Sbjct: 661 A 661
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 98/181 (54%), Gaps = 9/181 (4%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMF--LYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
D+NVV++ +I Y++ G DAL++F ++ +P FT L++C L + G
Sbjct: 442 DKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLG 501
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A L+N +VG L+ +Y + G +D +VF++M +++V+W S+++ +G
Sbjct: 502 RQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGM 561
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIH-----GLSNEQDLEFGEQIHGLVIKNGFD 173
HG E+ + LF ++ + A+ +F+ V++ G+ ++ + F + + G I G +
Sbjct: 562 HGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAE 621
Query: 174 Y 174
+
Sbjct: 622 H 622
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 193/661 (29%), Positives = 326/661 (49%), Gaps = 58/661 (8%)
Query: 12 IISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNG 69
++ + R + +A+ ++ MI G +P + F LL + L +E G Q+ A V K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
V L+ LY + G V VF+ + ++ V+WNS++S E + F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 130 CELVRSEVALTESSFVGVIHGLSN---EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
++ V + + V V+ SN + L G+Q+H ++ G + + N+LV MY
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMY 246
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+ + S++ + RD+V+WNT++ +L ++E +ALE M ++ V P++ T
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 247 YVINSCAGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
V+ +C+ L+ GK +HA +KN +L+ + FVGSALVD Y C + F + +
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD 366
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELLQ--LGYRPNEFTFSHVL----RSSLAFQLLQ 359
+ I WNA+I GY+ LL ++ G N T + V+ RS +
Sbjct: 367 RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA 426
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+H +++ G + +V +LM +Y+R G
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMD--------------------------------MYSRLG 454
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR---------AARI--Y 468
+ + +++ ++E D+V+WN +I + +++ L L M+ A+R+
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P++ T +++L +C+ L LA G +H K + ++D V + L+DMY KCG + S K
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNL-ATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F+++ +NVITW +I A G++G Q A++ R M G KP+ V I+V AC H G+
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN-ALIWRTF 647
V EG+ +F M YGVEP DHY CVVDLL R G +KEA +++ MP N A W +
Sbjct: 634 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693
Query: 648 L 648
L
Sbjct: 694 L 694
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 144/568 (25%), Positives = 269/568 (47%), Gaps = 55/568 (9%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE---- 57
+RN VS+NS+IS+ E AL F M++ EP+ FT +++ C +L E
Sbjct: 161 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ A L+ G ++F+ L+ +YG+ G L + + LVTWN+++S
Sbjct: 221 GKQVHAYGLRKGEL--NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYEL 176
++ + + + E+V V E + V+ S+ + L G+++H +KNG D
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V ++LV+MY C + S ++F + R + WN +I +++E+ +AL L++ M
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 237 I-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ N TT V+ +C ++IH V+K L+ D FV + L+D Y++ ++
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ------------LGYRPNEF 343
A F ++ ++++V+WN +I GY LL+ +Q + +PN
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSI 518
Query: 344 TFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
T +L S A L G E + Y + K+ L +D
Sbjct: 519 TLMTILPSCAALSALA-------KGKEIHAYAI--------KNNLATD------------ 551
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
V + + +Y + G + K+ Q+ + ++++WN++I A +G+ +E ++L + M
Sbjct: 552 -VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 610
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCG 521
+ P+ TF+S+ +ACS + G + ++K + SSD + C ++D+ G+ G
Sbjct: 611 VQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC--VVDLLGRAG 668
Query: 522 SIGSSVKIFNEMT-DRNVI-TWTALISA 547
I + ++ N M D N W++L+ A
Sbjct: 669 RIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 195/445 (43%), Gaps = 33/445 (7%)
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
W ++ + S +A+ Y+ M V + P+ F ++ + A LQ+ LGK IHA V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 270 KNALECD-VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSI 327
K D V V + LV+ Y KC + + F IS +N VSWN+LI S + ++
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
+L P+ FT V+ + + + + MG + + Y L + G
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE----GLMMGKQVHAYGL--------RKG 232
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
++ +F+ N + +Y + G+ + LL D+V+WN V+++
Sbjct: 233 ELN---SFII-----------NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
N E LE + M + PD +T S+L ACS L L G LH K + ++
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM-EF 566
FV + L+DMY C + S ++F+ M DR + W A+I+ N + AL F M E
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 567 LGFKPDRVALIAVLTAC-RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G + + V+ AC R G R+ E G++ + + ++D+ R G +
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRK--EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI 456
Query: 626 KEAEKIITTMPFPPNALIWRTFLEG 650
A +I M + + W T + G
Sbjct: 457 DIAMRIFGKME-DRDLVTWNTMITG 480
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 138/269 (51%), Gaps = 19/269 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLL-SCDSLNPVEG 58
M DR + +N++I+ YS+ + ++AL +F+ M + G T G++ +C
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 59 AQ-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS--I 115
+ + V+K GL D FV L+ +Y R G +D + +F M + LVTWN++++ +
Sbjct: 424 KEAIHGFVVKRGLD-RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482
Query: 116 FGKHGFVEDCMFLFCELVR---------SEVALTESS--FVGVIHGLSNEQDLEFGEQIH 164
F +H ED + L ++ S V+L +S + ++ + L G++IH
Sbjct: 483 FSEHH--EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
IKN ++ V ++LV+MY +C + + K+F + ++V++WN II A N
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCA 253
+A++L M V V PN+ TF+ V +C+
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACS 629
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 7/228 (3%)
Query: 428 LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNL 487
+SQ P+ W ++ + + +E + + M I PDNY F +LL A + L ++
Sbjct: 56 ISQSRSPEW--WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDM 113
Query: 488 ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISA 547
LG +H + K V N L+++Y KCG G+ K+F+ +++RN ++W +LIS+
Sbjct: 114 ELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISS 173
Query: 548 LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
L + ALE FR M +P L++V+TAC + + EG+ + ++++ +YG+
Sbjct: 174 LCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQVH-AYGLRK 231
Query: 608 EMDHYHCVVDLLVRYGHL-KEAEKIITTMPFPPNALI-WRTFLEG-CQ 652
+ + L+ YG L K A + F L+ W T L CQ
Sbjct: 232 GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 40/251 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMIN------RG-----FEPTQFTFGGLL- 48
M DR++V++N++I+ Y + EDAL + M N +G +P T +L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 49 SCDSLNPV-EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV 107
SC +L+ + +G ++ A +KN L D VG+AL+ +Y + GCL VF+ +P+K+++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNL-ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVI 584
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLV 167
TWN I+ +G HG ++ + L ++ V E +F+ V S+ ++ G +I V
Sbjct: 585 TWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YV 643
Query: 168 IKNGFDYE------------------LLVANSLVNMY---FQCAGIWS----AEKMFKDV 202
+K + E + A L+NM F AG WS A ++ ++
Sbjct: 644 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNL 703
Query: 203 EIRDVVSWNTI 213
EI ++ + N I
Sbjct: 704 EIGEIAAQNLI 714
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 181/598 (30%), Positives = 306/598 (51%), Gaps = 41/598 (6%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI---FGKHGFVEDCM-FLFCEL 132
+ T L+ LY HG + S F+ + +K++ +WNSI+S FGK+ +C+ LF
Sbjct: 56 LSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMC 115
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
+ +F ++ + D G+++H V K GF+ ++ VA SLV++Y + +
Sbjct: 116 GGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVL 172
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
A K+F D+ ++DV SWN +I ++ N AL + RM + V + T ++ C
Sbjct: 173 DVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVC 232
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
A + I G IH V+K+ L+ DVFV +AL++ Y+K L+ A + F ++ +++VSWN
Sbjct: 233 AQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWN 292
Query: 313 ALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYEN 371
++I Y + P++ + +QLG RP+ T
Sbjct: 293 SIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVS------------------------ 328
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALN-IPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
L S+ + + + L FV + + VV N + +Y + G N + Q
Sbjct: 329 ----LTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQ 384
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLAL 489
L R D +SWN ++ NG E ++ + M R P+ T+VS++ A S + L
Sbjct: 385 LPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQ 444
Query: 490 GSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G +H LIK + + D FV LID+YGKCG + ++ +F E+ + W A+I++L
Sbjct: 445 GMKIHAKLIKNSLYL--DVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASL 502
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
G++G + AL+ F++M K D + +++L+AC H GLV EG + F+ M + YG++P
Sbjct: 503 GIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPS 562
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYDTLNSTK 666
+ HY C+VDLL R G+L++A +++ MP P+A IW L C+ A+ TL S +
Sbjct: 563 LKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDR 620
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 162/563 (28%), Positives = 277/563 (49%), Gaps = 44/563 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDAL----RMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEG 58
+N+ S+NSIISAY R G +A+ ++F P +TF +L +C SL V+G
Sbjct: 83 KNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSL--VDG 140
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ V K G F D FV +L+ LY R+G LD VF DMP K + +WN+++S F +
Sbjct: 141 KKVHCCVFKMG-FEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQ 199
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + + V + + ++ + D+ G IH V+K+G D ++ V
Sbjct: 200 NGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFV 259
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N+L+NMY + + A+ +F +E+RD+VSWN+II A ++ + AL + M + +
Sbjct: 260 SNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGI 319
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLEGAH 297
P+ T V + + + L + + +SI VI+ L+ DV +G+ALV+ YAK + AH
Sbjct: 320 RPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAH 379
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ--LGYRPNEFTFSHVLRSSLAF 355
F ++ K+ +SWN L+ GY + +++ PN+ T+ ++ +
Sbjct: 380 TVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPA---- 435
Query: 356 QLLQLHCLIIRMGYENYEYV--LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Y +V L M +AK LI ++L V A +
Sbjct: 436 ----------------YSHVGALQQGMKIHAK--LIKNSLYL--------DVFVATCLID 469
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y + G+ + + L ++ R V WN +IA+ +G +E L+LFK M A R+ D+ T
Sbjct: 470 LYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHIT 529
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FVSLLSACS + G +++K I ++D+ G+ G + + ++ M
Sbjct: 530 FVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNM 589
Query: 534 T-DRNVITWTALISALGLNGFAQ 555
+ W AL+SA + G A+
Sbjct: 590 PIQPDASIWGALLSACKIYGNAE 612
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 132/259 (50%), Gaps = 9/259 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M R++VS+NSII+AY + ALR F M G P T L S + + +
Sbjct: 283 MEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSI--FSQLSDQR 340
Query: 61 LQASVL----KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ S+L + D +G AL+ +Y + G ++ +VF+ +PRK ++WN++V+ +
Sbjct: 341 ISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGY 400
Query: 117 GKHGFVEDCM--FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
++G + + + E R + + ++V +I S+ L+ G +IH +IKN
Sbjct: 401 TQNGLASEAIDAYNMMEECRDTIP-NQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL 459
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ VA L+++Y +C + A +F ++ V WN II +L +AL+L+ M
Sbjct: 460 DVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDML 519
Query: 235 VDIVFPNQTTFVYVINSCA 253
+ V + TFV ++++C+
Sbjct: 520 AERVKADHITFVSLLSACS 538
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 193/661 (29%), Positives = 326/661 (49%), Gaps = 58/661 (8%)
Query: 12 IISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNG 69
++ + R + +A+ ++ MI G +P + F LL + L +E G Q+ A V K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
V L+ LY + G V VF+ + ++ V+WNS++S E + F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 130 CELVRSEVALTESSFVGVIHGLSN---EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
++ V + + V V+ SN + L G+Q+H ++ G + + N+LV MY
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMY 246
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+ + S++ + RD+V+WNT++ +L ++E +ALE M ++ V P++ T
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 247 YVINSCAGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
V+ +C+ L+ GK +HA +KN +L+ + FVGSALVD Y C + F + +
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD 366
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELLQ--LGYRPNEFTFSHVL----RSSLAFQLLQ 359
+ I WNA+I GY+ LL ++ G N T + V+ RS +
Sbjct: 367 RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA 426
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+H +++ G + +V +LM +Y+R G
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMD--------------------------------MYSRLG 454
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR---------AARI--Y 468
+ + +++ ++E D+V+WN +I + +++ L L M+ A+R+
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P++ T +++L +C+ L LA G +H K + ++D V + L+DMY KCG + S K
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNL-ATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F+++ +NVITW +I A G++G Q A++ R M G KP+ V I+V AC H G+
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN-ALIWRTF 647
V EG+ +F M YGVEP DHY CVVDLL R G +KEA +++ MP N A W +
Sbjct: 634 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693
Query: 648 L 648
L
Sbjct: 694 L 694
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 143/566 (25%), Positives = 267/566 (47%), Gaps = 51/566 (9%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQL 61
+RN VS+NS+IS+ E AL F M++ EP+ FT +++ C +L EG +
Sbjct: 161 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 62 QASVLKNGLFCAD--AFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
V GL + +F+ L+ +YG+ G L + + LVTWN+++S ++
Sbjct: 221 GKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELLV 178
+ + + E+V V E + V+ S+ + L G+++H +KNG D V
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI- 237
++LV+MY C + S ++F + R + WN +I +++E+ +AL L++ M
Sbjct: 341 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 400
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ N TT V+ +C ++IH V+K L+ D FV + L+D Y++ ++ A
Sbjct: 401 LLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAM 460
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ------------LGYRPNEFTF 345
F ++ ++++V+WN +I GY LL+ +Q + +PN T
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 520
Query: 346 SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+L S A L G E + Y + K+ L +D V
Sbjct: 521 MTILPSCAALSALA-------KGKEIHAYAI--------KNNLATD-------------V 552
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+ + +Y + G + K+ Q+ + ++++WN++I A +G+ +E ++L + M
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 612
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSI 523
+ P+ TF+S+ +ACS + G + ++K + SSD + C ++D+ G+ G I
Sbjct: 613 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC--VVDLLGRAGRI 670
Query: 524 GSSVKIFNEMT-DRNVI-TWTALISA 547
+ ++ N M D N W++L+ A
Sbjct: 671 KEAYQLMNMMPRDFNKAGAWSSLLGA 696
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 195/445 (43%), Gaps = 33/445 (7%)
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
W ++ + S +A+ Y+ M V + P+ F ++ + A LQ+ LGK IHA V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 270 KNALECD-VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSI 327
K D V V + LV+ Y KC + + F IS +N VSWN+LI S + ++
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
+L P+ FT V+ + + + + MG + + Y L + G
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE----GLMMGKQVHAYGL--------RKG 232
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
++ +F+ N + +Y + G+ + LL D+V+WN V+++
Sbjct: 233 ELN---SFII-----------NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
N E LE + M + PD +T S+L ACS L L G LH K + ++
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM-EF 566
FV + L+DMY C + S ++F+ M DR + W A+I+ N + AL F M E
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 567 LGFKPDRVALIAVLTAC-RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G + + V+ AC R G R+ E G++ + + ++D+ R G +
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRK--EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI 456
Query: 626 KEAEKIITTMPFPPNALIWRTFLEG 650
A +I M + + W T + G
Sbjct: 457 DIAMRIFGKME-DRDLVTWNTMITG 480
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 138/269 (51%), Gaps = 19/269 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLL-SCDSLNPVEG 58
M DR + +N++I+ YS+ + ++AL +F+ M + G T G++ +C
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 59 AQ-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS--I 115
+ + V+K GL D FV L+ +Y R G +D + +F M + LVTWN++++ +
Sbjct: 424 KEAIHGFVVKRGLD-RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482
Query: 116 FGKHGFVEDCMFLFCELVR---------SEVALTESS--FVGVIHGLSNEQDLEFGEQIH 164
F +H ED + L ++ S V+L +S + ++ + L G++IH
Sbjct: 483 FSEHH--EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
IKN ++ V ++LV+MY +C + + K+F + ++V++WN II A N
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCA 253
+A++L M V V PN+ TF+ V +C+
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACS 629
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 7/229 (3%)
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+SQ P+ W ++ + + +E + + M I PDNY F +LL A + L +
Sbjct: 55 FISQSRSPEW--WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQD 112
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
+ LG +H + K V N L+++Y KCG G+ K+F+ +++RN ++W +LIS
Sbjct: 113 MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
+L + ALE FR M +P L++V+TAC + + EG+ + ++++ +YG+
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQVH-AYGLR 230
Query: 607 PEMDHYHCVVDLLVRYGHL-KEAEKIITTMPFPPNALI-WRTFLEG-CQ 652
+ + L+ YG L K A + F L+ W T L CQ
Sbjct: 231 KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 40/251 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMIN------RG-----FEPTQFTFGGLL- 48
M DR++V++N++I+ Y + EDAL + M N +G +P T +L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 49 SCDSLNPV-EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV 107
SC +L+ + +G ++ A +KN L D VG+AL+ +Y + GCL VF+ +P+K+++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNL-ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVI 584
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLV 167
TWN I+ +G HG ++ + L ++ V E +F+ V S+ ++ G +I V
Sbjct: 585 TWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YV 643
Query: 168 IKNGFDYE------------------LLVANSLVNMY---FQCAGIWS----AEKMFKDV 202
+K + E + A L+NM F AG WS A ++ ++
Sbjct: 644 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNL 703
Query: 203 EIRDVVSWNTI 213
EI ++ + N I
Sbjct: 704 EIGEIAAQNLI 714
>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
Length = 860
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 186/667 (27%), Positives = 331/667 (49%), Gaps = 57/667 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLLS-CDSLNPVE-GAQ 60
+N S+ ++I+AY++ GY A+ +F M++ G EP T+ G+L+ C +L +E G +
Sbjct: 194 KNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMR 253
Query: 61 LQA---SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+ A + GL D + +L L+ R G L +F+ MP +++VTW ++++ +
Sbjct: 254 IHALIHRIYTLGLE-YDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYN 312
Query: 118 KHGFVEDCMFLF--CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ G+ + + L+ ++ ++AL+ V+ S ++LE G +H + F+
Sbjct: 313 QRGYSMEALELYHCMDIEPDDIALS-----NVLQACSRLKNLEQGRAVHSRIASRDFEPS 367
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-ALELYLRMS 234
L+V LV+MY +C + A + F + RDV+SW ++I A + ENFG+ ALE++ M
Sbjct: 368 LMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSH-ENFGREALEVFHSME 426
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
++ V PN TF VI++C+ L + + G+++H++V+ D FVG+ALV Y+K ++
Sbjct: 427 LEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVD 486
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSL 353
A + F I K SW +++ + + L G+RP FS L S
Sbjct: 487 FARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCT 546
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
A + + + A G+I + + +V +N++
Sbjct: 547 ALE---------------------DVSRARAIHGVIKSSDFYPD-------LVLSNVLMN 578
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y + G+ + + Q+ + VSW +I A NG E LEL+K M + P+
Sbjct: 579 VYAKCGELEKARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMD---VQPNFIA 635
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FV ++S+C+ L L G +H + + +++ V L++MY KCG +G + + F+
Sbjct: 636 FVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIV-TALVNMYAKCGKLGLAREFFDST 694
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+ W ++ +A G + LE +REM G +P+ + L++VL AC H G++ E
Sbjct: 695 YCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECE 754
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII--------TTMPFPPNALIWR 645
FE M +G+ P +HY C+ DLL R G L+EAEK++ + P W
Sbjct: 755 HRFECMVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWM 814
Query: 646 TFLEGCQ 652
+FL C+
Sbjct: 815 SFLGACK 821
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 167/653 (25%), Positives = 303/653 (46%), Gaps = 57/653 (8%)
Query: 12 IISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQASVLKNGL 70
+ISAY++ GY +AL ++ M RG +P TF +LS C L +E + ++ +
Sbjct: 1 MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFC 130
D + ALL LY + G L+E +FE M R+++ TWN++++ + +H F ++ + F
Sbjct: 61 ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAF- 119
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG--FDYELLVANSLVNMYFQ 188
R + + +F V+ + DLE G+ IH + + + ++ NSLV MY +
Sbjct: 120 --RRMDAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGK 177
Query: 189 CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR-MSVDIVFPNQTTFVY 247
C + AE++F + ++ SW +I A A++ +A+E++ MS V P+ T+
Sbjct: 178 CGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAG 237
Query: 248 VINSCAGLQNSILGKSIHA---KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
V+ +C+ L + G IHA ++ LE D + ++ +A+C +L G F +
Sbjct: 238 VLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMP 297
Query: 305 NKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQLLQLHCL 363
++ +V+W +I Y + L + + P++ S+VL++ S L Q +
Sbjct: 298 HRTVVTWTTMIAAYNQRGYSMEALELYHCMDI--EPDDIALSNVLQACSRLKNLEQGRAV 355
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
R+ ++E SLM ++ +Y + G E
Sbjct: 356 HSRIASRDFE---PSLMVQ--------------------------TLLVDMYVKCGDLAE 386
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
+ + D++SW +I A +H +E LE+F M + P++ TF +++ ACS+
Sbjct: 387 ARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSR 446
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
L +L G +LH + T I SD FV N L+ MY K G + + +F+ + + +W
Sbjct: 447 LSSLLPGRALHSRVVATGHI-SDEFVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSWRV 505
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSY 603
++ AL NG + ALE + + GF+P A L +C +E R +
Sbjct: 506 MLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSC-------TALEDVSRARAIH 558
Query: 604 GVEPEMDHY------HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
GV D Y + ++++ + G L++A + M N + W T + G
Sbjct: 559 GVIKSSDFYPDLVLSNVLMNVYAKCGELEKARLVFDQMT-EKNEVSWTTMIGG 610
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/589 (24%), Positives = 256/589 (43%), Gaps = 68/589 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP R VV++ ++I+AY++ GY +AL ++ M EP +L +C L +E
Sbjct: 296 MPHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQG 352
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ S + + F V T L+ +Y + G L E F+ + +++W S+++ +
Sbjct: 353 RAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHE 412
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
F + + +F + V +F VI S L G +H V+ G + V
Sbjct: 413 NFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVG 472
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+LV+MY + + A +F + ++ SW ++ AL ++ + +ALE+Y R+ ++
Sbjct: 473 NALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFR 532
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P F + SC L++ ++IH + + D+ + + L++ YAKC LE A L
Sbjct: 533 PGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARLV 592
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL- 358
F +++ KN VSW +I GYA P L + + + +PN F V+ S L
Sbjct: 593 FDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMDV--QPNFIAFVPVISSCADLGALV 650
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
++H + G +N E ++ +L+ YAK G + A F +
Sbjct: 651 EGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYC-------------- 696
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
PD +WN + A A G +VLEL++ M + P+ T +
Sbjct: 697 ------------------PDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLL 738
Query: 476 SLLSACSKLCNLALGS-------SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
S+L ACS + L + HG+ +S+ + C + D+ G+ G + + K
Sbjct: 739 SVLVACSHMGMLEECEHRFECMVADHGIAP-----TSEHYSC--MTDLLGRSGRLEEAEK 791
Query: 529 IFNEMTDRN---------VITWTALISALGLN---GFAQRALEKFREME 565
+ + + V W + + A + G A A EK E++
Sbjct: 792 VVKMASGESGSEAASPVAVSAWMSFLGACKTHNDWGRAAGAAEKLYELD 840
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/598 (30%), Positives = 299/598 (50%), Gaps = 33/598 (5%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFED-MPRKSLVTWNSIVSI 115
EG + + + NG+ + +G L+ +Y G L E +F+ + + WN ++S
Sbjct: 469 EGKMVHSVISSNGIP-IEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSE 527
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ K G + ++LF ++ + + +F ++ + + ++IHG V K GF
Sbjct: 528 YAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSY 587
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V NSL+ YF+ + SA K+F ++ RDVVSWN++I + ALE +++M +
Sbjct: 588 NTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLI 647
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V + T V + +CA + + LG+++H + +K +V + L+D Y+KC NL
Sbjct: 648 LRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLND 707
Query: 296 AHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F ++ K +VSW +LI Y + +I L E+ G P+ ++ + VL +
Sbjct: 708 AIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACAC 767
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
L G + + Y+ + M AL +P +N + +
Sbjct: 768 GNSLD-------KGRDVHNYIRKNNM-----------------ALCLP----VSNALMDM 799
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y + G E + SQ+ DIVSWN +I + N E L+LF M+ PD T
Sbjct: 800 YAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITM 858
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
LL AC L L +G +HG I + SS+ V N LIDMY KCGS+ + +F+ +
Sbjct: 859 ACLLPACGSLAALEIGRGIHGCILRNGY-SSELHVANALIDMYVKCGSLVHARLLFDMIP 917
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
++++ITWT +IS G++G A+ F++M G KPD + ++L AC H GL+ EG
Sbjct: 918 EKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWG 977
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M +EP+++HY C+VDLL R G+L +A +I TMP P+A IW L GC+
Sbjct: 978 FFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCR 1035
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 152/591 (25%), Positives = 278/591 (47%), Gaps = 48/591 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPV-EG 58
+ D V +N ++S Y++ G +++ +F M G +TF +L C +L V E
Sbjct: 513 LSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGEC 572
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ V K G + V +L+ Y + G +D +F+++ + +V+WNS++S
Sbjct: 573 KRIHGCVYKLGFGSYNTVV-NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVM 631
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF + F +++ V + ++ V + +N L G +HG +K F E++
Sbjct: 632 NGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMF 691
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L++MY +C + A + F+ + + VVSW ++I A + A+ L+ M V
Sbjct: 692 NNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGV 751
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ + V+++CA + G+ +H + KN + + V +AL+D YAKC ++E A+L
Sbjct: 752 SPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYL 811
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
FS+I K+IVSWN +I GY+ S P L +Q RP+ T + +L + + L
Sbjct: 812 VFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESRPDGITMACLLPACGSLAAL 871
Query: 359 Q----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+ +H I+R GY + +V +L+ Y K G ++V A +
Sbjct: 872 EIGRGIHGCILRNGYSSELHVANALIDMYVKCG----------------SLVHARL---- 911
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
L + D+++W ++I+ C +G E + F+ MR A I PD TF
Sbjct: 912 ------------LFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITF 959
Query: 475 VSLLSACSK--LCNLALGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIFN 531
S+L ACS L N G + +I + + + + C ++D+ + G++ + +
Sbjct: 960 TSILYACSHSGLLNEGWG-FFNSMISECNMEPKLEHYAC--MVDLLARTGNLSKAYNLIE 1016
Query: 532 EMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
M + + W AL+ ++ + A EK E F +PD +L
Sbjct: 1017 TMPIKPDATIWGALLCGCRIHHDVELA-EKVAEHVF-ELEPDNAGYYVLLA 1065
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 138/572 (24%), Positives = 263/572 (45%), Gaps = 55/572 (9%)
Query: 95 VSVFEDMPRKSL-------VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGV 147
+S + D+PR S + N+ + F + G + + + L +SE+ L +++ +
Sbjct: 400 LSSYLDVPRSSTRVGAFAKLDENTKICKFCEVGDLRNAVELLRMSQKSELDL--NAYSSI 457
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV-EIRD 206
+ + + L+ G+ +H ++ NG E ++ LV MY C + ++F +
Sbjct: 458 LQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNK 517
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
V WN ++ A+ ++ +++ L+ +M + N TF ++ A L K IH
Sbjct: 518 VFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHG 577
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS 326
V K V ++L+ Y K ++ AH F E+ ++++VSWN++I G
Sbjct: 578 CVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNG---- 633
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
FSH S+L F +Q+ LI+R+G + L +L+ S A
Sbjct: 634 ------------------FSH---SALEF-FVQM--LILRVGVD-----LATLVNSVAAC 664
Query: 387 GLISDALAFVTALN-------IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+ +L+ AL+ R V+ N + +Y++ G N+ ++ ++ + +VSW
Sbjct: 665 ANVG-SLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSW 723
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+IAA G Y + + LF M + + PD Y+ S+L AC+ +L G +H I+K
Sbjct: 724 TSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRK 783
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+ V N L+DMY KCGS+ + +F+++ +++++W +I N AL+
Sbjct: 784 NNMALC-LPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALK 842
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
F EM+ +PD + + +L AC + G + + R+ G E+ + ++D+
Sbjct: 843 LFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRN-GYSSELHVANALIDMY 900
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
V+ G L A + +P + + W + GC
Sbjct: 901 VKCGSLVHARLLFDMIP-EKDLITWTVMISGC 931
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 181/598 (30%), Positives = 306/598 (51%), Gaps = 41/598 (6%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI---FGKHGFVEDCM-FLFCEL 132
+ T L+ LY HG + S F+ + +K++ +WNSI+S FGK+ +C+ LF
Sbjct: 56 LSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMC 115
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
+ +F ++ + D G+++H V K GF+ ++ VA SLV++Y + +
Sbjct: 116 GGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVL 172
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
A K+F D+ ++DV SWN +I ++ N AL + RM + V + T ++ C
Sbjct: 173 DVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVC 232
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
A + I G IH V+K+ L+ DVFV +AL++ Y+K L+ A + F ++ +++VSWN
Sbjct: 233 AQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWN 292
Query: 313 ALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYEN 371
++I Y + P++ + +QLG RP+ T
Sbjct: 293 SIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVS------------------------ 328
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALN-IPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
L S+ + + + L FV + + VV N + +Y + G N + Q
Sbjct: 329 ----LTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQ 384
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLAL 489
L R D +SWN ++ NG E ++ + M R P+ T+VS++ A S + L
Sbjct: 385 LPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQ 444
Query: 490 GSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G +H LIK + + D FV LID+YGKCG + ++ +F E+ + W A+I++L
Sbjct: 445 GMKIHAKLIKNSLYL--DVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASL 502
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
G++G + AL+ F++M K D + +++L+AC H GLV EG + F+ M + YG++P
Sbjct: 503 GIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPS 562
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYDTLNSTK 666
+ HY C+VDLL R G+L++A +++ MP P+A IW L C+ A+ TL S +
Sbjct: 563 LKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDR 620
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 162/563 (28%), Positives = 277/563 (49%), Gaps = 44/563 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDAL----RMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEG 58
+N+ S+NSIISAY R G +A+ ++F P +TF +L +C SL V+G
Sbjct: 83 KNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSL--VDG 140
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ V K G F D FV +L+ LY R+G LD VF DMP K + +WN+++S F +
Sbjct: 141 KKVHCCVFKMG-FEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQ 199
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + + V + + ++ + D+ G IH V+K+G D ++ V
Sbjct: 200 NGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFV 259
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N+L+NMY + + A+ +F +E+RD+VSWN+II A ++ + AL + M + +
Sbjct: 260 SNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGI 319
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLEGAH 297
P+ T V + + + L + + +SI VI+ L+ DV +G+ALV+ YAK + AH
Sbjct: 320 RPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAH 379
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ--LGYRPNEFTFSHVLRSSLAF 355
F ++ K+ +SWN L+ GY + +++ PN+ T+ ++ +
Sbjct: 380 TVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPA---- 435
Query: 356 QLLQLHCLIIRMGYENYEYV--LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Y +V L M +AK LI ++L V A +
Sbjct: 436 ----------------YSHVGALQQGMKIHAK--LIKNSLYL--------DVFVATCLID 469
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y + G+ + + L ++ R V WN +IA+ +G +E L+LFK M A R+ D+ T
Sbjct: 470 LYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHIT 529
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FVSLLSACS + G +++K I ++D+ G+ G + + ++ M
Sbjct: 530 FVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNM 589
Query: 534 T-DRNVITWTALISALGLNGFAQ 555
+ W AL+SA + G A+
Sbjct: 590 PIQPDASIWGALLSACKIYGNAE 612
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 132/259 (50%), Gaps = 9/259 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M R++VS+NSII+AY + ALR F M G P T L S + + +
Sbjct: 283 MEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSI--FSQLSDQR 340
Query: 61 LQASVL----KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ S+L + D +G AL+ +Y + G ++ +VF+ +PRK ++WN++V+ +
Sbjct: 341 ISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGY 400
Query: 117 GKHGFVEDCM--FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
++G + + + E R + + ++V +I S+ L+ G +IH +IKN
Sbjct: 401 TQNGLASEAIDAYNMMEECRDTIP-NQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL 459
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ VA L+++Y +C + A +F ++ V WN II +L +AL+L+ M
Sbjct: 460 DVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDML 519
Query: 235 VDIVFPNQTTFVYVINSCA 253
+ V + TFV ++++C+
Sbjct: 520 AERVKADHITFVSLLSACS 538
>gi|302817567|ref|XP_002990459.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
gi|300141844|gb|EFJ08552.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
Length = 830
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/663 (26%), Positives = 324/663 (48%), Gaps = 44/663 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQA 63
+N+VS+ +++SAY G +E AL +F+ M+ G P + T+ +L+ L+ G ++
Sbjct: 174 KNIVSWTTMVSAYVERGCLEQALTLFIEMLQEGVAPNEITYVSVLNACDLDA--GRKVHR 231
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+ ++GL +DAFVG AL+ +Y R G L++ VF+ + ++L+ WNS+++ + +
Sbjct: 232 LIEQSGLD-SDAFVGNALIKMYRRCGSLEDASLVFDGIADRNLLVWNSMIAGYASLNEAQ 290
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG--EQIHGLVIKNGFDYELLVANS 181
+ F +++ + + + V+ + L+ + IH L +++G D + LV +
Sbjct: 291 GTLEFFRKMLLDGWKGDKHTLLTVLDACAKSSTLQASSLQTIHDLAVESGLDSDTLVGTA 350
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
LV + + SA+ +F + +D+ +WN + A A+ A+EL +M +D V P+
Sbjct: 351 LVKIKSEQGDRKSAKMVFDSLRAKDLAAWNCMFSAYAKHGRLRDAMELQEQMKLDQVRPD 410
Query: 242 QTTFVYVINSCAGLQNSI---LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ TFV ++++C +S+ GK H ++++ D +G+ALV YA C L+ A L
Sbjct: 411 KVTFVSILSACTATGSSLGLETGKKTHEEILEQGYRLDAVLGTALVRMYAACGRLDDAKL 470
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F ++ +++++SW ++ Y + +QL G+ P+ L +
Sbjct: 471 VFEKMESRDLISWTTMLGAYTQARLLDEASITFRRIQLEGHTPDRVALIAALGACTNLSS 530
Query: 358 LQ-LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
+ H I ++G+E V +L+ Y+ G + DA
Sbjct: 531 ARDFHERIRQLGWEKDPLVANALLEVYSACGSLEDA------------------------ 566
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
NET + + P ++SWN++IAA G +L + M PD+ T +
Sbjct: 567 -----NETFDGIGE---PSVISWNLLIAAHTRLGHPDRAFDLLRAMELQGHNPDSVTLAT 618
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TD 535
++++ + L G +H I + + D+ V L++ YGKCG ++ IF +
Sbjct: 619 VINSRASLQLFRKGKIIHDSILEAGM-EIDSVVATALVNFYGKCGDFATARSIFQGVGAA 677
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
NV+TW + ++A +G A AL EM G P V ++VL+ C H G+ G L
Sbjct: 678 DNVVTWNSTLAAYAQSGHASEALHVLAEMVQQGVAPTAVTFVSVLSVCGHAGVADVGCHL 737
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
F + Y ++P +HY C++DLL R G L+EA +++ TMP P+++ W L GC
Sbjct: 738 FSSLRWDYDMDPIPEHYGCMIDLLARGGWLEEARQLLKTMPTTPDSIKWMALLSGCHGAS 797
Query: 656 IAK 658
+ K
Sbjct: 798 VDK 800
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 166/655 (25%), Positives = 315/655 (48%), Gaps = 43/655 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
M R+ + +++AY+R G++++A +F M++ G P + T +++ +S + EG
Sbjct: 69 MASRDAGLWAPMMAAYARVGHLQEATGLFHRMLDEGVVPDRVTLLTVINACSESGSLAEG 128
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFED-MPRKSLVTWNSIVSIFG 117
++ + + F VGTAL+ +Y + G +DE VF++ + RK++V+W ++VS +
Sbjct: 129 RRVHRRI-QGSDFEWSVDVGTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVSAYV 187
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G +E + LF E+++ VA E ++V V+ N DL+ G ++H L+ ++G D +
Sbjct: 188 ERGCLEQALTLFIEMLQEGVAPNEITYVSVL----NACDLDAGRKVHRLIEQSGLDSDAF 243
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+L+ MY +C + A +F + R+++ WN++I A LE + +M +D
Sbjct: 244 VGNALIKMYRRCGSLEDASLVFDGIADRNLLVWNSMIAGYASLNEAQGTLEFFRKMLLDG 303
Query: 238 VFPNQTTFVYVINSCAG---LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
++ T + V+++CA LQ S L ++IH +++ L+ D VG+ALV ++ + +
Sbjct: 304 WKGDKHTLLTVLDACAKSSTLQASSL-QTIHDLAVESGLDSDTLVGTALVKIKSEQGDRK 362
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSL 353
A + F + K++ +WN + YA L E ++L RP++ TF +L +
Sbjct: 363 SAKMVFDSLRAKDLAAWNCMFSAYAKHGRLRDAMELQEQMKLDQVRPDKVTFVSILSACT 422
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
A L + G + +E +L + G DA V +
Sbjct: 423 ATG----SSLGLETGKKTHEEIL--------EQGYRLDA-------------VLGTALVR 457
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y G+ ++ + ++E D++SW ++ A E F+ ++ PD
Sbjct: 458 MYAACGRLDDAKLVFEKMESRDLISWTTMLGAYTQARLLDEASITFRRIQLEGHTPDRVA 517
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
++ L AC+ NL+ H I++ D V N L+++Y CGS+ + + F+ +
Sbjct: 518 LIAALGACT---NLSSARDFHERIRQLGW-EKDPLVANALLEVYSACGSLEDANETFDGI 573
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+ +VI+W LI+A G RA + R ME G PD V L V+ + L R+G
Sbjct: 574 GEPSVISWNLLIAAHTRLGHPDRAFDLLRAMELQGHNPDSVTLATVINSRASLQLFRKGK 633
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ + + + G+E + +V+ + G A I + N + W + L
Sbjct: 634 IIHDSILEA-GMEIDSVVATALVNFYGKCGDFATARSIFQGVGAADNVVTWNSTL 687
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 166/617 (26%), Positives = 298/617 (48%), Gaps = 54/617 (8%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L +C +L +G +L A ++ +GL + + ++ +Y +D VF+ M +
Sbjct: 18 LRACHTLP--KGKELHAQIVSDGLD-KNLHLANGIVHMYLVCKSVDNARKVFDKMASRDA 74
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
W +++ + + G +++ LF ++ V + + VI+ S L G ++H
Sbjct: 75 GLWAPMMAAYARVGHLQEATGLFHRMLDEGVVPDRVTLLTVINACSESGSLAEGRRVHRR 134
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGK 225
+ + F++ + V +LV MY +C + A ++F + +R ++VSW T++ A E +
Sbjct: 135 IQGSDFEWSVDVGTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVSAYVERGCLEQ 194
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
AL L++ M + V PN+ T+V V+N+C + G+ +H + ++ L+ D FVG+AL+
Sbjct: 195 ALTLFIEMLQEGVAPNEITYVSVLNAC----DLDAGRKVHRLIEQSGLDSDAFVGNALIK 250
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFT 344
Y +C +LE A L F I+++N++ WN++I GYAS + ++ ++L G++ ++ T
Sbjct: 251 MYRRCGSLEDASLVFDGIADRNLLVWNSMIAGYASLNEAQGTLEFFRKMLLDGWKGDKHT 310
Query: 345 FSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
VL + LQ L ++ +SGL SD L + A
Sbjct: 311 LLTVLDACAKSSTLQASS-------------LQTIHDLAVESGLDSDTL-------VGTA 350
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+V I + G + L D+ +WN + +A A +G ++ +EL + M+
Sbjct: 351 LVK------IKSEQGDRKSAKMVFDSLRAKDLAAWNCMFSAYAKHGRLRDAMELQEQMKL 404
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI--KKT--EIISS----DTFVCNMLIDM 516
++ PD TFVS+LSAC+ A GSSL GL KKT EI+ D + L+ M
Sbjct: 405 DQVRPDKVTFVSILSACT-----ATGSSL-GLETGKKTHEEILEQGYRLDAVLGTALVRM 458
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y CG + + +F +M R++I+WT ++ A A FR ++ G PDRVAL
Sbjct: 459 YAACGRLDDAKLVFEKMESRDLISWTTMLGAYTQARLLDEASITFRRIQLEGHTPDRVAL 518
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
IA L AC + R+ F R G E + + ++++ G L++A + +
Sbjct: 519 IAALGACTNLSSARD----FHERIRQLGWEKDPLVANALLEVYSACGSLEDANETFDGIG 574
Query: 637 FPPNALIWRTFLEGCQR 653
P+ + W + R
Sbjct: 575 -EPSVISWNLLIAAHTR 590
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 166/365 (45%), Gaps = 25/365 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEGA 59
M R+++S+ +++ AY++ +++A F + G P + L +C +L+
Sbjct: 475 MESRDLISWTTMLGAYTQARLLDEASITFRRIQLEGHTPDRVALIAALGACTNLSSAR-- 532
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + G + D V ALL +Y G L++ F+ + S+++WN +++ +
Sbjct: 533 DFHERIRQLG-WEKDPLVANALLEVYSACGSLEDANETFDGIGEPSVISWNLLIAAHTRL 591
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + L + + VI+ ++ Q G+ IH +++ G + + +VA
Sbjct: 592 GHPDRAFDLLRAMELQGHNPDSVTLATVINSRASLQLFRKGKIIHDSILEAGMEIDSVVA 651
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRD-VVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LVN Y +C +A +F+ V D VV+WN+ + A A+S + +AL + M V
Sbjct: 652 TALVNFYGKCGDFATARSIFQGVGAADNVVTWNSTLAAYAQSGHASEALHVLAEMVQQGV 711
Query: 239 FPNQTTFVYVINSC--AGLQN------SILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
P TFV V++ C AG+ + S L I C ++D A+
Sbjct: 712 APTAVTFVSVLSVCGHAGVADVGCHLFSSLRWDYDMDPIPEHYGC-------MIDLLARG 764
Query: 291 DNLEGAHLCFSEI-SNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
LE A + + + + W AL+ G + + T +F+ ++LLQ + + + +H+
Sbjct: 765 GWLEEARQLLKTMPTTPDSIKWMALLSGCHGASVDKTGVFMAMQLLQ---QNTQSSSAHI 821
Query: 349 LRSSL 353
S+L
Sbjct: 822 AISNL 826
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 170/564 (30%), Positives = 286/564 (50%), Gaps = 43/564 (7%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F+++P S++ WN I+ + +G + + L+ ++ V + ++ V+ S
Sbjct: 65 LFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLA 124
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
+E G +IH G + ++ V +LV+ Y +C + A+++F + RDVV+WN +I
Sbjct: 125 IEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAG 184
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ A++L ++M + + PN +T V V+ + + GK++H ++ + +
Sbjct: 185 CSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNG 244
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE--LL 334
V VG+ L+D YAKC L A F + +N VSW+A+I GY + L + +L
Sbjct: 245 VVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMIL 304
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLG-SLMTSYAKSGLI 389
+ P T VLR+ L +LHC II++G + +LG +L++ YAK G+I
Sbjct: 305 KDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLG-SVLDILLGNTLLSMYAKCGVI 363
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
DA ++ ++ D VS++ +++ C N
Sbjct: 364 DDA--------------------------------IRFFDEMNPKDSVSFSAIVSGCVQN 391
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTF 508
G+ L +F+ M+ + I PD T + +L ACS L L G HG LI + ++DT
Sbjct: 392 GNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRG--FATDTL 449
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+CN LIDMY KCG I + ++FN M ++++W A+I G++G AL F ++ LG
Sbjct: 450 ICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG 509
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
KPD + I +L++C H GLV EG F+ M+R + + P M+H C+VD+L R G + EA
Sbjct: 510 LKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEA 569
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
I MPF P+ IW L C+
Sbjct: 570 HHFIRNMPFEPDVRIWSALLSACR 593
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 152/573 (26%), Positives = 285/573 (49%), Gaps = 34/573 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P+ +V+ +N II AY+ G + A+ ++ M++ G P ++T+ +L +C L +E G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ + GL +D FV TAL+ Y + G L E +F M + +V WN++++
Sbjct: 129 VEIHSHAKMFGLE-SDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSL 187
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G +D + L ++ + S+ VGV+ + + L G+ +HG ++ FD ++V
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVV 247
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV-DI 237
L++MY +C + A K+F + +R+ VSW+ +IG S+ +ALEL+ +M + D
Sbjct: 248 GTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDA 307
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P T V+ +CA L + G+ +H +IK D+ +G+ L+ YAKC ++ A
Sbjct: 308 MDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAI 367
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F E++ K+ VS++A++ G + + ++QL G P+ T VL +
Sbjct: 368 RFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLA 427
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
LQ G+ ++ Y+ ++ +A LI +AL +Y+
Sbjct: 428 ALQ-------HGFCSHGYL---IVRGFATDTLICNAL------------------IDMYS 459
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G+ + ++ ++++R DIVSWN +I +G E L LF + A + PD+ TF+
Sbjct: 460 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 519
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-D 535
LLS+CS + G + + I C ++D+ G+ G I + M +
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 579
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+V W+AL+SA ++ + E ++++ LG
Sbjct: 580 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLG 612
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 222/459 (48%), Gaps = 39/459 (8%)
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
+++++ ++ + L ++IH +KN + + V + L +Y C + A ++F
Sbjct: 7 VKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLF 66
Query: 200 KDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
++ V+ WN II A A + F A++LY M V PN+ T+ +V+ +C+GL
Sbjct: 67 DEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIE 126
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
G IH+ LE DVFV +ALVDFYAKC L A FS +S++++V+WNA+I G +
Sbjct: 127 DGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCS 186
Query: 320 SKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEY 374
++ L++++ + G PN T VL + + L LH +R ++N
Sbjct: 187 LYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVV 246
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
V L+ YAK + A I++ G NE
Sbjct: 247 VGTGLLDMYAKCQCLLYA-------------------RKIFDVMGVRNE----------- 276
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
VSW+ +I + KE LELF M + P T S+L AC+KL +L+ G L
Sbjct: 277 --VSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKL 334
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H I K + D + N L+ MY KCG I +++ F+EM ++ ++++A++S NG
Sbjct: 335 HCYIIKLGSV-LDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGN 393
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
A AL FR M+ G PD ++ VL AC H ++ G
Sbjct: 394 AAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG 432
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 158/351 (45%), Gaps = 39/351 (11%)
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
F + +++++ +C ++ K IH +KN D V L Y C+ + A
Sbjct: 5 FEVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARR 64
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSS---LA 354
F EI N +++ WN +I YA +I L +L LG RPN++T+ VL++ LA
Sbjct: 65 LFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLA 124
Query: 355 FQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ +++H G E+ +V +L+ YAK G++ +A
Sbjct: 125 IEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEA--------------------- 163
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+L S + D+V+WN +IA C+ G + ++L M+ I P++ T
Sbjct: 164 -----------QRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSST 212
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
V +L + L G +LHG + + V L+DMY KC + + KIF+ M
Sbjct: 213 IVGVLPTVGEAKALGHGKALHGYCVRRS-FDNGVVVGTGLLDMYAKCQCLLYARKIFDVM 271
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFL-GFKPDRVALIAVLTAC 583
RN ++W+A+I + + ALE F +M P V L +VL AC
Sbjct: 272 GVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRAC 322
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
Query: 473 TFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
++ LL AC + +L +H +K T ++D+ V + L +Y C + + ++F+
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTS--NADSSVLHKLTRLYLSCNQVVLARRLFD 67
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
E+ + +VI W +I A NG A++ + M LG +P++ VL AC + +
Sbjct: 68 EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G+E+ + +G+E ++ +VD + G L EA+++ ++M + + W + GC
Sbjct: 128 GVEIHSHA-KMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGC 185
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/656 (27%), Positives = 315/656 (48%), Gaps = 65/656 (9%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGAQL 61
R+ VS+ +++S Y++ G E+AL ++ M G PT + +LS + + +G +
Sbjct: 106 RDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSV 165
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A K G FC++ FVG AL+ LY R G VF DMP + VT+N+++S +
Sbjct: 166 HAQGYKQG-FCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAH 224
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E + +F E+ S ++ + ++ ++ DL+ G Q+H + K G + ++ S
Sbjct: 225 GEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGS 284
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+++Y +C + +A +F +VV WN I+ A + + K+ EL+ +M + PN
Sbjct: 285 LLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPN 344
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
Q T+ ++ +C LG+ IH+ +K E D++V L+D Y+K LE A
Sbjct: 345 QFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404
Query: 302 EISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF----Q 356
+ K++VSW ++I GY ++ E+ + G P+ + + Q
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQ 464
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
LQ+H + GY SG +S A V +Y
Sbjct: 465 GLQIHARVYVSGY----------------SGDVSIWNALVN----------------LYA 492
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
R G+ E ++E D ++WN +++ A +G ++E L++F M + + + +TFVS
Sbjct: 493 RCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVS 552
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LSA + L + G +H + KT S +T V N LI +YGKCGS + F+EM++R
Sbjct: 553 ALSASANLAEIKQGKQIHARVIKTG-HSFETEVGNALISLYGKCGSFEDAKMEFSEMSER 611
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
N ++W +I++ +G AL+ F +M+ +EG+ F
Sbjct: 612 NEVSWNTIITSCSQHGRGLEALDFFDQMK------------------------KEGLSYF 647
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ M+ YG+ P DHY CV+D+ R G L A+K + MP +A++WRT L C+
Sbjct: 648 KSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACK 703
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 151/599 (25%), Positives = 287/599 (47%), Gaps = 41/599 (6%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ A + GL D VG L+ LY ++G + VFE++ + V+W +++S + ++
Sbjct: 63 EIHAKAITRGL-GKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQN 121
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G E+ ++L+ ++ R+ V T V+ + + G +H K GF E V
Sbjct: 122 GLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVG 181
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L+ +Y +C AE++F D+ RD V++NT+I A+ + ALE++ M +
Sbjct: 182 NALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLS 241
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ T ++ +CA L + G +H+ + K + D + +L+D Y KC ++E A +
Sbjct: 242 PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F+ + N+V WN +++ + + F L ++ G RPN+FT+ +LR+ +
Sbjct: 302 FNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEI 361
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q+H L ++ G+E+ YV G L+ Y+K G + A
Sbjct: 362 DLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKAR--------------------- 400
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
++L L+ D+VSW +IA + K+ L FK M+ I+PDN
Sbjct: 401 -----------RVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGL 449
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S +S C+ + + G +H + + S D + N L+++Y +CG I + F E+
Sbjct: 450 ASAISGCAGIKAMRQGLQIHARVYVSG-YSGDVSIWNALVNLYARCGRIREAFSSFEEIE 508
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
++ ITW L+S +G + AL+ F M+ G K + ++ L+A + +++G +
Sbjct: 509 HKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQ 568
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ R+ ++ G E + + ++ L + G ++A+ + M N + W T + C +
Sbjct: 569 IHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSEMS-ERNEVSWNTIITSCSQ 625
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 144/555 (25%), Positives = 268/555 (48%), Gaps = 65/555 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP R+ V+FN++IS +++C + E AL +F M + G P T LL +C SL ++ G
Sbjct: 204 MPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKG 263
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL + + K G+ +D + +LL LY + G ++ + +F R ++V WN I+ FG+
Sbjct: 264 TQLHSYLFKAGM-SSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQ 322
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ LFC++ + + + ++ ++ + +++ GEQIH L +K GF+ ++ V
Sbjct: 323 INDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYV 382
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ L++MY + + A ++ + ++ +DVVSW ++I + E AL + M +
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGI 442
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+P+ I+ CAG++ G IHA+V + DV + +ALV+ YA+C + A
Sbjct: 443 WPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFS 502
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF-- 355
F EI +K+ ++WN L+ G+A ++ + + + Q G + N FTF L +S
Sbjct: 503 SFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAE 562
Query: 356 --QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q Q+H +I+ G+ ++E +G N +
Sbjct: 563 IKQGKQIHARVIKTGH-SFETEVG-------------------------------NALIS 590
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y + G + + S++ + VSWN +I +C+ +G E L+ F M+ + +Y
Sbjct: 591 LYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGL---SY- 646
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F S+ S +G+ + D + C +ID++G+ G + + K EM
Sbjct: 647 FKSM-------------SDKYGIRPRP-----DHYAC--VIDIFGRAGQLDRAKKFVEEM 686
Query: 534 T-DRNVITWTALISA 547
+ + W L+SA
Sbjct: 687 PIAADAMVWRTLLSA 701
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
T + D V N+LID+Y K G + + ++F E++ R+ ++W A++S NG + AL
Sbjct: 70 TRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALW 129
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
+R+M G P L +VL++C L +G + + + G E + ++ L
Sbjct: 130 LYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQ-GFCSETFVGNALITLY 188
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC 654
+R G + AE++ MP + + + T + G +C
Sbjct: 189 LRCGSFRLAERVFYDMPH-RDTVTFNTLISGHAQC 222
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 172/567 (30%), Positives = 294/567 (51%), Gaps = 23/567 (4%)
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
WN ++ GF+ED + L+ + R +F V+ G +H +V
Sbjct: 94 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 153
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR---DVVSWNTIIGALAESENFGK 225
+GF++ + V N LV+MY +C +A ++F ++ R D+VSWN+I+ A + + +
Sbjct: 154 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 213
Query: 226 ALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
A++++ RM+ D+ + P+ + V V+ +CA + GK +H +++ L DVFVG+A+V
Sbjct: 214 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 273
Query: 285 DFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEF 343
D YAKC +E A+ F + K++VSWNA++ GY+ ++ L ++ + N
Sbjct: 274 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 333
Query: 344 TFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI-------SDA 392
T+S V+ + L F+ L + + G E L SL++ A +G + A
Sbjct: 334 TWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHA 393
Query: 393 LAFVTAL--NIP-RAVVPANIIAGIYNRTGQYNETVKLLSQLERPD--IVSWNIVIAACA 447
+ ++ L N P ++ N + +Y++ + + D +V+W ++I A
Sbjct: 394 IKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNA 453
Query: 448 HNGDYKEVLELFKYMRAAR--IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
+G+ E LELF M + P+ +T L AC++L L G +H + + S+
Sbjct: 454 QHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESA 513
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
FV N LIDMY K G + ++ +F+ M RN ++WT+L++ G++G + AL+ F EM+
Sbjct: 514 MLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ 573
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
+G PD V + VL AC H G+V +G+ F MN+ +GV P +HY C+VDLL R G L
Sbjct: 574 KVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRL 633
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQ 652
EA ++I MP P +W L C+
Sbjct: 634 DEAMELIRGMPMKPTPAVWVALLSACR 660
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 152/600 (25%), Positives = 274/600 (45%), Gaps = 88/600 (14%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQ 62
V +N +I G++ED L+++ M G+ P +TF +L +C + GA +
Sbjct: 90 TVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVH 149
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK---SLVTWNSIVSIFGKH 119
A V +G F + FVG L+ +YGR G + VF++M + LV+WNSIV+ + +
Sbjct: 150 AVVFASG-FEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQG 208
Query: 120 GFVEDCMFLFCELVRSEVALTES--SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G M +F E + ++ + S V V+ ++ G+Q+HG +++G ++
Sbjct: 209 GDSIRAMKMF-ERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 267
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM---- 233
V N++V+MY +C + A K+F+ ++++DVVSWN ++ ++ F AL L+ ++
Sbjct: 268 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 327
Query: 234 -----------------------SVDIVF--------PNQTTFVYVINSCAGLQNSILGK 262
++D+ PN T V +++ CA + GK
Sbjct: 328 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGK 387
Query: 263 SIHAKVIKNALEC-------DVFVGSALVDFYAKCDNLEGAHLCFSEISNKN--IVSWNA 313
H IK L D+ V +AL+D Y+KC + + A F I K+ +V+W
Sbjct: 388 ETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTV 447
Query: 314 LILGYASKSSPT-SIFLLIELLQLG--YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYE 370
LI G A ++ L ++LQ PN FT S L + L R G +
Sbjct: 448 LIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGAL-------RFGRQ 500
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ YVL + S A+ FV AN + +Y+++G + +
Sbjct: 501 IHAYVLRNRFES---------AMLFV-----------ANCLIDMYSKSGDVDAARVVFDN 540
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+ + + VSW ++ +G +E L++F M+ + PD TFV +L ACS + G
Sbjct: 541 MHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQG 600
Query: 491 -SSLHGLIKKTEII-SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV-ITWTALISA 547
+ +G+ K ++ ++ + C ++D+ + G + ++++ M + W AL+SA
Sbjct: 601 INYFNGMNKDFGVVPGAEHYAC--MVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSA 658
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 4/162 (2%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG--FEPTQFTFG-GLLSCDSLNPVE-G 58
DR+VV++ +I ++ G +AL +F M+ P FT L++C L + G
Sbjct: 439 DRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFG 498
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A VL+N A FV L+ +Y + G +D VF++M +++ V+W S+++ +G
Sbjct: 499 RQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGM 558
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
HG E+ + +F E+ + + +FV V++ S+ ++ G
Sbjct: 559 HGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQG 600
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 186/675 (27%), Positives = 322/675 (47%), Gaps = 82/675 (12%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ A ++ NG+ + F+G+ LL +Y + GC+++ +F+ M +++ +W +I+ ++
Sbjct: 108 GFQVHAQLVVNGVDVCE-FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYC 166
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G E+ + LF +V V F V S ++ G+ ++ ++ GF+
Sbjct: 167 GLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSC 226
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDV------------------------------ 207
V S+++M+ +C + A + F+++E +DV
Sbjct: 227 VKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSG 286
Query: 208 -----VSWNTIIGALAESENFGKA------------------------------------ 226
V+WN II A+S F +A
Sbjct: 287 VKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEA 346
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVD 285
L ++ +M ++ V PN T +++C L G+ IH IK L+ D+ VG++LVD
Sbjct: 347 LSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVD 406
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFT 344
+YAKC ++E A F I ++VSWNA++ GYA + S +I LL E+ G P+ T
Sbjct: 407 YYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIIT 466
Query: 345 FSHVLRSSLAF----QLLQLHCLIIRMGYE-NYEYVLGSLMT--SYAKSGLISDALAFVT 397
++ ++ + L+ + MG + N + G+L L + +V
Sbjct: 467 WNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVL 526
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
+I + + + +Y+ + S+L D+V WN +I+ACA +G L+
Sbjct: 527 RNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALD 586
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
L + M + + + T VS L ACSKL L G +H I + + + + F+ N LIDMY
Sbjct: 587 LLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCN-FILNSLIDMY 645
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
G+CGSI S +IF+ M R++++W +IS G++GF A+ F++ +G KP+ +
Sbjct: 646 GRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFT 705
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
+L+AC H GL+ EG + F+ M Y ++P ++ Y C+VDLL R G E + I MPF
Sbjct: 706 NLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPF 765
Query: 638 PPNALIWRTFLEGCQ 652
PNA +W + L C+
Sbjct: 766 EPNAAVWGSLLGACR 780
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 208/453 (45%), Gaps = 60/453 (13%)
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
+L G Q+H ++ NG D + + L+ +Y Q + A +MF + R+V SW I+
Sbjct: 104 NLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIME 163
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
++ + ++L+ M + V P+ F V +C+ L+N +GK ++ ++ E
Sbjct: 164 MYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEG 223
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
+ V +++D + KC ++ A F EI K++ WN ++ GY SK I ++
Sbjct: 224 NSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMK 283
Query: 336 L-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
L G +P++ T++ ++++ YA+SG +A
Sbjct: 284 LSGVKPDQVTWN-------------------------------AIISGYAQSGQFEEASK 312
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
+ + G+ + +P++VSW +IA NG E
Sbjct: 313 YFLEM------------GGLKDF---------------KPNVVSWTALIAGSEQNGYDFE 345
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
L +F+ M + P++ T S +SAC+ L L G +HG K E + SD V N L+
Sbjct: 346 ALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLV 405
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
D Y KC S+ + + F + ++++W A+++ L G + A+E EM+F G +PD +
Sbjct: 406 DYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDII 465
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
++T G + +E F+RM+ S G++P
Sbjct: 466 TWNGLVTGFTQYGDGKAALEFFQRMH-SMGMDP 497
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 145/596 (24%), Positives = 257/596 (43%), Gaps = 106/596 (17%)
Query: 11 SIISAYSRCGYVEDALRMF-------LYMIN---RGFEPTQFTFGGLLSCDSLNPVEGAQ 60
SI+ + +CG ++ A R F ++M N G+ ++ F L C S + G +
Sbjct: 230 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGY-TSKGEFKKALKCISDMKLSGVK 288
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-----RKSLVTWNSIVSI 115
D A++ Y + G +E F +M + ++V+W ++++
Sbjct: 289 ------------PDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAG 336
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDY 174
++G+ + + +F ++V V + + +N L G +IHG IK D
Sbjct: 337 SEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDS 396
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA---------------- 218
+LLV NSLV+ Y +C + A + F ++ D+VSWN ++ A
Sbjct: 397 DLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMK 456
Query: 219 -------------------ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
+ + ALE + RM + PN TT + +C ++N
Sbjct: 457 FQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLK 516
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
LGK IH V++N +E VGSAL+ Y+ CD+LE A FSE+S +++V WN++I A
Sbjct: 517 LGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACA 576
Query: 320 -SKSSPTSIFLLIELLQLGYRPNEFTFSHVLR--SSLAF--QLLQLHCLIIRMGYENYEY 374
S S ++ LL E+ N T L S LA Q ++H IIR G + +
Sbjct: 577 QSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNF 636
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
+L SL+ +Y R G ++ ++ + +
Sbjct: 637 ILNSLID--------------------------------MYGRCGSIQKSRRIFDLMPQR 664
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
D+VSWN++I+ +G + + LF+ R + P++ TF +LLSACS + G
Sbjct: 665 DLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYF 724
Query: 495 GLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISA 547
++K + + + C ++D+ + G +++ +M + N W +L+ A
Sbjct: 725 KMMKTEYAMDPAVEQYAC--MVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 778
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 217/485 (44%), Gaps = 74/485 (15%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQ 62
NVVS+ ++I+ + GY +AL +F M+ G +P T +S C +L+ + G ++
Sbjct: 326 NVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 385
Query: 63 ASVLKNGLFCADAFVGTALLGLYGR-------------------------------HGCL 91
+K +D VG +L+ Y + G
Sbjct: 386 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSH 445
Query: 92 DEVVSVFEDMP----RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGV 147
+E + + +M ++TWN +V+ F ++G + + F + + ++ G
Sbjct: 446 EEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGA 505
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
+ ++L+ G++IHG V++N + V ++L++MY C + A +F ++ RDV
Sbjct: 506 LAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDV 565
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
V WN+II A A+S AL+L M++ V N T V + +C+ L GK IH
Sbjct: 566 VVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQF 625
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTS 326
+I+ L+ F+ ++L+D Y +C +++ + F + +++VSWN +I Y +
Sbjct: 626 IIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDA 685
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
+ L + +G +PN TF++ L+++ + S
Sbjct: 686 VNLFQQFRTMGLKPNHITFTN-------------------------------LLSACSHS 714
Query: 387 GLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNI 441
GLI + + + A+ PA + + +R GQ+NET++ + ++ P+ W
Sbjct: 715 GLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGS 774
Query: 442 VIAAC 446
++ AC
Sbjct: 775 LLGAC 779
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 115/249 (46%), Gaps = 4/249 (1%)
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y +TG + ++ ++ ++ SW ++ GDY+E ++LF M + PD++
Sbjct: 133 VYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFV 192
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F + ACS+L N +G ++ + ++ V ++DM+ KCG + + + F E+
Sbjct: 193 FPKVFKACSELKNYRVGKDVYDYMLSIGF-EGNSCVKGSILDMFIKCGRMDIARRFFEEI 251
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++V W ++S G ++AL+ +M+ G KPD+V A+++ G E
Sbjct: 252 EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEAS 311
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF---PPNALIWRTFLEG 650
+ F M +P + + ++ + G+ EA + M PN++ + +
Sbjct: 312 KYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSA 371
Query: 651 CQRCRIAKY 659
C + ++
Sbjct: 372 CTNLSLLRH 380
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP R++VS+N +IS Y G+ DA+ +F G +P TF LLS C +E
Sbjct: 661 MPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEG 720
Query: 60 QLQASVLKNGLFCADAFVGTA-LLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIV 113
++K A A ++ L R G +E + E MP + W S++
Sbjct: 721 WKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLL 776
>gi|224063136|ref|XP_002301008.1| predicted protein [Populus trichocarpa]
gi|222842734|gb|EEE80281.1| predicted protein [Populus trichocarpa]
Length = 691
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 185/645 (28%), Positives = 313/645 (48%), Gaps = 83/645 (12%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G + ++K G + + ++ L+ +Y L + +F++MP K++VTW ++VS +
Sbjct: 21 QGKSFHSHLIKTG-YSHNVYIACNLVSMYADFTFLIDAYKLFDEMPVKNIVTWTTMVSAY 79
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIH---GLSNEQDLEFGEQIHGLVIKNGFD 173
+G + + L+ ++ S+ + V+ GL E +E G IH + D
Sbjct: 80 TSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGE--IELGRLIHKRFSRENLD 137
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIR---------------------------- 205
Y++++ N+L++MY +C + A K+F + +R
Sbjct: 138 YDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFKEGLVEEAVNLFNQ 197
Query: 206 ----DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILG 261
+VVSWNTII LAE+ + +AL+ +M + + ++ TF + +C+ + G
Sbjct: 198 MPDRNVVSWNTIIAGLAENGS-SRALQFVCKMHREGIKLDKFTFPCALKTCSYAGFLVAG 256
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN------KNIVSWNALI 315
K IH V+K+ LE F SALVD Y+ C+ L+ A F + S ++V WN+++
Sbjct: 257 KQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYSGGTGSICDSLVLWNSML 316
Query: 316 LGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLR---SSLAFQL-LQLHCLIIRMGYE 370
GY + + ++ ++ ++ G + +T S L+ + L +L +Q+H LI+ G+E
Sbjct: 317 SGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNVRLGIQVHALIVTSGHE 376
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+YV+GS I+ +Y + G + KL +
Sbjct: 377 -LDYVVGS-------------------------------ILVDLYAKLGNMKDAFKLFHR 404
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
L + DIV+W+ ++ CA L LF+ M + D Y ++L CS L ++ G
Sbjct: 405 LPKKDIVAWSGLLMGCAKMELNSLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTG 464
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+H K ++ LIDMY KCG + + +F + DR+V+ WT +I
Sbjct: 465 KQVHAFCIKRGY-ETEQVTITALIDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQ 523
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
NG A ALE FR+M G KP+ V + VLTACRH GLV E +F M + +EP+++
Sbjct: 524 NGRANEALEIFRQMVQSGLKPNEVTYLGVLTACRHAGLVVEAQTIFGTMKCDHRLEPQLE 583
Query: 611 HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
HY+C+VDLL + G+ KE EK+I MPF P+ IW + L C R
Sbjct: 584 HYYCMVDLLCQAGYFKEVEKLIAEMPFKPDKTIWSSMLGACGTHR 628
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 142/597 (23%), Positives = 264/597 (44%), Gaps = 83/597 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLL-SCDSLNPVEG 58
MP +N+V++ +++SAY+ G +A++++ M++ E P F + +L +C + +E
Sbjct: 64 MPVKNIVTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIEL 123
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCL--------------------------- 91
+L D + ALL +Y + GCL
Sbjct: 124 GRLIHKRFSRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYF 183
Query: 92 -----DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
+E V++F MP +++V+WN+I++ ++G F+ C++ R + L + +F
Sbjct: 184 KEGLVEEAVNLFNQMPDRNVVSWNTIIAGLAENGSSRALQFV-CKMHREGIKLDKFTFPC 242
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE--- 203
+ S L G+QIH V+K+G + ++LV+MY C G+ A ++F
Sbjct: 243 ALKTCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYSGGT 302
Query: 204 ---IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
+V WN+++ E A+ + ++ + T + C L N L
Sbjct: 303 GSICDSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNVRL 362
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
G +HA ++ + E D VGS LVD YAK N++ A F + K+IV+W+ L++G A
Sbjct: 363 GIQVHALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMGCAK 422
Query: 321 KS-SPTSIFLLIELLQLGYRPNEFTFSHVLR--SSLAF--QLLQLHCLIIRMGYENYEYV 375
+ ++ L +++ G +++ S+VL+ SSLA Q+H I+ GYE +
Sbjct: 423 MELNSLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKRGYETEQVT 482
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
+ +L+ Y+K G + D L L + D
Sbjct: 483 ITALIDMYSKCGEVEDGLV--------------------------------LFGCVADRD 510
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
+V W +I CA NG E LE+F+ M + + P+ T++ +L+AC + ++ G
Sbjct: 511 VVCWTGIIVGCAQNGRANEALEIFRQMVQSGLKPNEVTYLGVLTACRHAGLVVEAQTIFG 570
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM---TDRNVITWTALISALG 549
+K + ++D+ + G K+ EM D+ + W++++ A G
Sbjct: 571 TMKCDHRLEPQLEHYYCMVDLLCQAGYFKEVEKLIAEMPFKPDKTI--WSSMLGACG 625
>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
Length = 1096
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 190/659 (28%), Positives = 329/659 (49%), Gaps = 55/659 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQA 63
+V S+ II+A++ G++ +A +F M G P + TF +L +C +L E ++ A
Sbjct: 296 SVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCE--KIFA 353
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM-PRKSLVTWNSIVSIFGKHGFV 122
V GL D +GTA + + + G L VFE++ +++V+W ++ + + GF+
Sbjct: 354 RVKHLGLEL-DTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFI 412
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
L+ + A+T F+ V+ +DL EQIH ++ +GF+ ++++ L
Sbjct: 413 RAAFDLYKRMDCEPNAVT---FMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCL 469
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
V MY +C + SA +F++++ R VV+WN+++ A A + + ++L+LY RM ++ P++
Sbjct: 470 VTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDK 529
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T++ V+++C S+ +A + LE D+ +A V YA+C +L+ A F
Sbjct: 530 ITYLAVLDAC----QSVSEARRYAATFE--LELDIAARNAAVSAYARCGSLKEAKAAFDA 583
Query: 303 ISNKN-IVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL-- 358
I KN V+WNA+I G A ++L G R N T+ L + + + L
Sbjct: 584 IQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTR 643
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
QLH I+ L + N+ AV+ +Y
Sbjct: 644 GRQLHARIL---------------------------LENIHEANLSNAVI------NMYG 670
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G +E + ++ D++SWN +IA A +G ++ LE FK M PD T++
Sbjct: 671 KCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLG 730
Query: 477 LLSACSKLCNLALGSSLHGLIKKT-EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
+ AC + +LALG ++H ++ + D V L+ MY +CGS+ + +F
Sbjct: 731 AIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHS 790
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE-GME 594
RN++TW+ LI+A +G AL+ FREM+ G KPD + ++ AC G+V++ G
Sbjct: 791 RNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGGRR 850
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+F+ + R Y V +HY C+V++L R G L+EAE +I MP + IW L C R
Sbjct: 851 IFDALGRVYPVSASAEHYGCMVEVLGRAGKLEEAEGLIQGMPRKASGAIWMALLAACNR 909
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 191/660 (28%), Positives = 323/660 (48%), Gaps = 61/660 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
+P NV S+ ++I+AY++ G++ + L F M G +P F F +L+ C S + EG
Sbjct: 87 LPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEG 146
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V+ G+ VG A++ LYG+ G + E +VFE +P ++LV+WN++++ +
Sbjct: 147 KAIHDCVVLAGM--ETQVVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQ 204
Query: 119 HGFVEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G +D M +F + + V +++FV V+ SN DL G+ H +I+ GFD L
Sbjct: 205 NGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLF 264
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVV---SWNTIIGALAESENFGKALELYLRMS 234
V NSLVNMY +C + A +F+ + +RDV+ SW II A A + + +A L+ +M
Sbjct: 265 VGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMD 324
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
++ V PN+ TFV V+ +C L + I A+V LE D +G+A V +AK +L
Sbjct: 325 LEGVLPNKVTFVTVLRACTTLAQC---EKIFARVKHLGLELDTTLGTAFVSTFAKLGDLA 381
Query: 295 GAHLCFSEI-SNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F + S++N+VSW +I YA + + F L + ++ PN TF V+ S L
Sbjct: 382 AARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYK--RMDCEPNAVTFMAVMDSCL 439
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ L Q+H ++ G+E+ + L+T Y K G + A +
Sbjct: 440 RPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWS--------------- 484
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ L+ +V+WN +++A A NG Y+ L+L++ M P
Sbjct: 485 -----------------IFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKP 527
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D T++++L AC + S T + D N + Y +CGS+ +
Sbjct: 528 DKITYLAVLDACQSV-------SEARRYAATFELELDIAARNAAVSAYARCGSLKEAKAA 580
Query: 530 FNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
F+ + N +TW A+IS L +G +++ALE F +ME G + + V +A L AC
Sbjct: 581 FDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKD 640
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ G +L R+ E + + V+++ + G L EA MP + + W T +
Sbjct: 641 LTRGRQLHARILLENIHEANLS--NAVINMYGKCGSLDEAMDEFVKMP-ERDVISWNTMI 697
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 154/581 (26%), Positives = 287/581 (49%), Gaps = 49/581 (8%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
++ L+ +Y + GCL + V VFE +P ++ +W ++++ + K G + + + F ++
Sbjct: 62 YLQNHLIFMYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLD 121
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
F V+ S+ L G+ IH V+ G + + +V N++VN+Y +C + A
Sbjct: 122 GTKPDAFVFSTVLTACSSAGALNEGKAIHDCVVLAGMETQ-VVGNAIVNLYGKCGRVHEA 180
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD-IVFPNQTTFVYVINSCAG 254
+ +F+ + R++VSWN +I A A++ + A++++ M +D V PN TFV V+++C+
Sbjct: 181 KAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSN 240
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV---SW 311
L + GKS H ++I+ + +FVG++LV+ Y KC +++ A L F ++ ++++ SW
Sbjct: 241 LLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSW 300
Query: 312 NALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF-QLLQLHCLIIRMGY 369
+I +A F+L + L G PN+ TF VLR+ Q ++ + +G
Sbjct: 301 TVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCEKIFARVKHLGL 360
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
E + + ++++AK G ++ A L R
Sbjct: 361 ELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSR-------------------------- 394
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
++VSW ++I A A G + +L+K M P+ TF++++ +C + +L
Sbjct: 395 -----NVVSWTVMIWAYAQQGFIRAAFDLYKRMDCE---PNAVTFMAVMDSCLRPEDLPR 446
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
+H + + SD + L+ MYGKCGS+ S+ IF + +R+V+ W +++SA
Sbjct: 447 AEQIHAHMVASG-FESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFA 505
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
NG +R+L+ + M G KPD++ +AVL AC+ R FE +E ++
Sbjct: 506 SNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSEARRYAATFE-------LELDI 558
Query: 610 DHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ V R G LKEA+ + + NA+ W + G
Sbjct: 559 AARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISG 599
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/572 (23%), Positives = 272/572 (47%), Gaps = 63/572 (11%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE---GA 59
RNVVS+ +I AY++ G++ A ++ M EP TF ++ SC L P +
Sbjct: 394 RNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEPNAVTFMAVMDSC--LRPEDLPRAE 448
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ A ++ +G F +D + L+ +YG+ G +D S+FE++ +S+V WNS++S F +
Sbjct: 449 QIHAHMVASG-FESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASN 507
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G E + L+ ++ + +++ V+ + + F+ EL +A
Sbjct: 508 GCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSEARR--------YAATFELELDIA 559
Query: 180 --NSLVNMYFQCAGIWSAEKMFKDVEIRD-VVSWNTIIGALAESENFGKALELYLRMSVD 236
N+ V+ Y +C + A+ F ++ ++ V+WN +I LA+ +ALE + +M ++
Sbjct: 560 ARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKMELE 619
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V N T++ + +C+ L++ G+ +HA+++ + + + +A+++ Y KC +L+ A
Sbjct: 620 GVRANSVTYLASLEACSSLKDLTRGRQLHARILLENIH-EANLSNAVINMYGKCGSLDEA 678
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF 355
F ++ ++++SWN +I YA S + + L G+ P+ T+ + + +
Sbjct: 679 MDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGSV 738
Query: 356 QLLQL----HCLIIRMG--YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
L L H ++ E V +L+T YA+ G + DA +
Sbjct: 739 PSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKS--------------- 783
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
++ R+ N +V+W+ +IAACA +G E L+LF+ M+ P
Sbjct: 784 ----VFWRSHSRN-------------LVTWSNLIAACAQHGRENEALDLFREMQLQGTKP 826
Query: 470 DNYTFVSLLSACSKLCNLALGS-SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
D TF +L++ACS+ + G + + + +S+ ++++ G+ G + +
Sbjct: 827 DALTFSTLVAACSRRGVVKDGGRRIFDALGRVYPVSASAEHYGCMVEVLGRAGKLEEAEG 886
Query: 529 IFNEMTDR-NVITWTALISALGLNGFAQRALE 559
+ M + + W AL++A G +R +
Sbjct: 887 LIQGMPRKASGAIWMALLAACNRRGDLERGIR 918
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/528 (25%), Positives = 240/528 (45%), Gaps = 52/528 (9%)
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
+L +S +L + + ++ + ++ G+ +H ++ +G + N L+ MY +C
Sbjct: 16 QLKKSSESLQPARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCG 75
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
+ A ++F+ + +V SW +I A A+ + + L + +M +D P+ F V+
Sbjct: 76 CLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLT 135
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+C+ GK+IH V+ +E V VG+A+V+ Y KC + A F + +N+VS
Sbjct: 136 ACSSAGALNEGKAIHDCVVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVS 194
Query: 311 WNALILGYASKSSPTSIFLLIELLQL--GYRPNEFTFSHVLRSSLAFQLLQL------HC 362
WNALI A + +L+ L RPN+ TF V+ + LL L H
Sbjct: 195 WNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDA--CSNLLDLPRGKSTHE 252
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIAGIYNRTGQY 421
IIR G+++Y +V SL+ Y K G + A L F
Sbjct: 253 RIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVF-------------------------- 286
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
E ++L L + SW ++IAA AHNG E LF M + P+ TFV++L AC
Sbjct: 287 -EKMRLRDVL---SVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRAC 342
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVIT 540
+ LA + +K + DT + + + K G + ++ +F + + RNV++
Sbjct: 343 T---TLAQCEKIFARVKHLG-LELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVS 398
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
WT +I A GF + A + ++ M+ +P+ V +AV+ +C + ++ M
Sbjct: 399 WTVMIWAYAQQGFIRAAFDLYKRMD---CEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMV 455
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
S G E ++ C+V + + G + A I + + + W + L
Sbjct: 456 AS-GFESDVVLQVCLVTMYGKCGSVDSAWSIFENLK-ERSVVAWNSML 501
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 186/350 (53%), Gaps = 10/350 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
+ +R+VV++NS++SA++ G E +L+++ M+ G +P + T+ +L D+ V A+
Sbjct: 489 LKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVL--DACQSVSEAR 546
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS-LVTWNSIVSIFGKH 119
A+ + L D A + Y R G L E + F+ + K+ VTWN+++S +H
Sbjct: 547 RYAATFELEL---DIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQH 603
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + + F ++ V +++ + S+ +DL G Q+H ++ +E ++
Sbjct: 604 GESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHARILLENI-HEANLS 662
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+++NMY +C + A F + RDV+SWNT+I A+ + +ALE + +M ++
Sbjct: 663 NAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWT 722
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA--LECDVFVGSALVDFYAKCDNLEGAH 297
P++ T++ I++C + + LGK+IH+ V A LE D V +ALV YA+C +L A
Sbjct: 723 PDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAK 782
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFS 346
F ++N+V+W+ LI A L +QL G +P+ TFS
Sbjct: 783 SVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFS 832
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 204/464 (43%), Gaps = 81/464 (17%)
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
L+ S + + P + + ++ CA +++ GK +H ++ + + ++ + L+ YAKC
Sbjct: 17 LKKSSESLQPAR--YASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKC 74
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVL 349
L+ A F + N+ SW ALI YA + + +QL G +P+ F FS VL
Sbjct: 75 GCLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVL 134
Query: 350 RSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+ + L +H ++ G E
Sbjct: 135 TACSSAGALNEGKAIHDCVVLAGMETQ--------------------------------- 161
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR-A 464
V N I +Y + G+ +E + +L ++VSWN +IAA A NG K+ +++F+ M
Sbjct: 162 VVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLD 221
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+ P++ TFVS++ ACS L +L G S H I +T S FV N L++MYGKCGS+
Sbjct: 222 GSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGF-DSYLFVGNSLVNMYGKCGSVD 280
Query: 525 SSVKIFNEMTDRNVIT---WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ +F +M R+V++ WT +I+A NG A F +M+ G P++V + VL
Sbjct: 281 HARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLR 340
Query: 582 AC-------------RHGGL-------------------VREGMELFERMNRSYGVEPEM 609
AC +H GL + ++FE + S V
Sbjct: 341 ACTTLAQCEKIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVS-- 398
Query: 610 DHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ ++ + G ++ A + M PNA+ + ++ C R
Sbjct: 399 --WTVMIWAYAQQGFIRAAFDLYKRMDCEPNAVTFMAVMDSCLR 440
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 263/501 (52%), Gaps = 21/501 (4%)
Query: 166 LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE--SENF 223
+ ++N F Y N+L++ Y + A +F+ + D S+N ++ ALA +
Sbjct: 78 IPLRNTFSY-----NALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHA 132
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
AL M D N +F +++CA ++S G+ +H V ++ DV + SAL
Sbjct: 133 ADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSAL 192
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT--SIFLLIELLQLGYRPN 341
VD YAKC+ E A F + +N+VSWN+LI Y ++ P ++ L +E++ G+ P+
Sbjct: 193 VDMYAKCERPEDARRVFDAMPERNVVSWNSLITCY-EQNGPVGEALMLFVEMMAAGFSPD 251
Query: 342 EFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFV 396
E T S V+ + + Q+H +++ + VL +L+ YAK G +A
Sbjct: 252 EVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIF 311
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
++ V +I+ G Y ++ + + SQ+ ++++WN++IAA A NG+ +E +
Sbjct: 312 DSMPSRSIVSETSILTG-YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAI 370
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI-----ISSDTFVCN 511
LF ++ I+P +YT+ ++L+AC + +L LG H + K SD FV N
Sbjct: 371 RLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGN 430
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
L+DMY K GSI K+F M R+ ++W A+I NG A+ AL F M P
Sbjct: 431 SLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENP 490
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D V +I VL+AC H GLV EG F M +G+ P DHY C+VDLL R GHLKEAE++
Sbjct: 491 DSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEEL 550
Query: 632 ITTMPFPPNALIWRTFLEGCQ 652
I MP P++++W + L C+
Sbjct: 551 INDMPMEPDSVLWASLLGACR 571
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 153/581 (26%), Positives = 262/581 (45%), Gaps = 100/581 (17%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKN 68
N+++S Y+R G + DA R+F + P + TF S N
Sbjct: 55 LNTLVSTYARLGRLRDARRVFDEI------PLRNTF-------SYN-------------- 87
Query: 69 GLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG--FVEDCM 126
ALL Y R G DE ++FE +P ++N++V+ +HG D +
Sbjct: 88 -----------ALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADAL 136
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
+ + L SF + + E+D GEQ+HGLV ++ ++ + ++LV+MY
Sbjct: 137 RFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMY 196
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+C A ++F + R+VVSWN++I ++ G+AL L++ M P++ T
Sbjct: 197 AKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLS 256
Query: 247 YVINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCD-------------- 291
V+++CAGL G+ +HA ++K + L D+ + +ALVD YAKC
Sbjct: 257 SVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPS 316
Query: 292 -----------------NLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIEL 333
N+E A + FS++ KN+++WN LI YA +I L ++L
Sbjct: 317 RSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQL 376
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
+ P +T+ +VL + LQL G + + +VL K G D
Sbjct: 377 KRDSIWPTHYTYGNVLNACGNIADLQL-------GQQAHVHVL--------KEGFRFD-- 419
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
V N + +Y +TG ++ K+ ++ D VSWN +I A NG K
Sbjct: 420 -----FGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAK 474
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS-LHGLIKKTEIISS-DTFVCN 511
+ L LF+ M + PD+ T + +LSAC + G H + + I S D + C
Sbjct: 475 DALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTC- 533
Query: 512 MLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLN 551
++D+ G+ G + + ++ N+M + + + W +L+ A L+
Sbjct: 534 -MVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLH 573
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 136/619 (21%), Positives = 248/619 (40%), Gaps = 152/619 (24%)
Query: 1 MPDRNVVSFNSIISAYSRC---------------------------------GYVEDALR 27
+P RN S+N+++SAY+R G+ DALR
Sbjct: 78 IPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALR 137
Query: 28 MFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYG 86
M F ++F LS C + + ++ D + +AL+ +Y
Sbjct: 138 FLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYA 197
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR---SEVALTESS 143
+ ++ VF+ MP +++V+WNS+++ + ++G V + + LF E++ S +T SS
Sbjct: 198 KCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSS 257
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
+ GL+ +++ G Q+H ++K + ++++ N+LV+MY +C W A +F +
Sbjct: 258 VMSACAGLAADRE---GRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSM 314
Query: 203 EIRDVVS-------------------------------WNTIIGALAESENFGKALELYL 231
R +VS WN +I A A++ +A+ L++
Sbjct: 315 PSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFV 374
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL------ECDVFVGSALVD 285
++ D ++P T+ V+N+C + + LG+ H V+K E DVFVG++LVD
Sbjct: 375 QLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVD 434
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFT 344
Y K +++ F ++ ++ VSWNA+I+GYA L E +L P+ T
Sbjct: 435 MYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVT 494
Query: 345 FSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
VL ++ SGL+ + + ++
Sbjct: 495 MIGVL-------------------------------SACGHSGLVDEGRRYFHSMTEDHG 523
Query: 405 VVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELF 459
+ P+ + + R G E +L++ + PD V W
Sbjct: 524 ITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLW-------------------- 563
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
SLL AC N+ LG G + + + +S +V +L +MY +
Sbjct: 564 ---------------ASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYV--LLSNMYAE 606
Query: 520 CGSIGSSVKIFNEMTDRNV 538
G ++ M DR V
Sbjct: 607 MGKWAEVFRVRRSMKDRGV 625
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 188/448 (41%), Gaps = 75/448 (16%)
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
++ HA+++K+ + + F+ + LV YA+ L A F EI +N S+NAL+ YA
Sbjct: 36 ARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYAR 95
Query: 321 KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM 380
P L E + P++ +++ V+ + + R G + L L
Sbjct: 96 LGRPDEARALFEAIP---DPDQCSYNAVVAA------------LARHGRGHAADALRFLA 140
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANI---IAGIYNRTGQYNET------VKLLSQL 431
+A + +A +F +AL+ A + + G+ R+ ++ V + ++
Sbjct: 141 AMHADD-FVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKC 199
Query: 432 ERPD-------------IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
ERP+ +VSWN +I NG E L LF M AA PD T S++
Sbjct: 200 ERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVM 259
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG---------------SI 523
SAC+ L G +H + K + + D + N L+DMY KCG SI
Sbjct: 260 SACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSI 319
Query: 524 GSSVKI----------------FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
S I F++M ++NVI W LI+A NG + A+ F +++
Sbjct: 320 VSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRD 379
Query: 568 GFKPDRVALIAVLTACRHGGLVREGME-----LFERMNRSYGVEPEMDHYHCVVDLLVRY 622
P VL AC + ++ G + L E +G E ++ + +VD+ ++
Sbjct: 380 SIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKT 439
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEG 650
G + + K+ M N + W + G
Sbjct: 440 GSIDDGAKVFERMAARDN-VSWNAMIVG 466
>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 194/606 (32%), Positives = 288/606 (47%), Gaps = 48/606 (7%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G L A ++K+ C ++ +L+ LY + L E VFE + K +V+WN I++ +
Sbjct: 24 KGKALHAQIIKSSSSCV--YIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGY 81
Query: 117 GKHG--FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+HG M LF + A +F GV S D G H + IK
Sbjct: 82 SQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCR 141
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ V +SL+NMY + A K+F + R+ VSW T+I A + +AL L+ M
Sbjct: 142 DVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMR 201
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ N+ F V+++ + GK IH +KN L V VG+ALV YAKC +L+
Sbjct: 202 REEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLD 261
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS-- 351
A F S+KN ++W+A+I G A L + L G RP+EFTF V+ +
Sbjct: 262 DALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACS 321
Query: 352 --SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
A++ Q+H ++++G+E+ YV+ +L+ YAK I DA
Sbjct: 322 DLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDA----------------- 364
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
R G L+ PDIV W +I NG+ ++ L L+ M I P
Sbjct: 365 -------RKG--------FDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILP 409
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ T S+L ACS L L G +H K + + + L MY KCG + +
Sbjct: 410 NELTMASVLKACSSLAALEQGKQIHARTVKYG-FGLEVPIGSALSTMYAKCGCLKDGTLV 468
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F M R+VI+W A+IS L NG + ALE F EM+ G KPD V + +L+AC H GLV
Sbjct: 469 FRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLV 528
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
G F M +G++P ++HY C+VD+L R G LKEA + F +A I E
Sbjct: 529 ERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEA------IEFTESATIDHGMWE 582
Query: 650 GCQRCR 655
+R R
Sbjct: 583 DVERVR 588
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 245/491 (49%), Gaps = 42/491 (8%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDA--LRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVEGA 59
+++VVS+N II+ YS+ G + + +F M P TF G+ + S L G
Sbjct: 68 NKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGG 127
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+L +V C D FVG++L+ +Y + G E VF+ MP ++ V+W +++S +
Sbjct: 128 RLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQ 187
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + LF + R E E F V+ L+ + + G+QIH + +KNG + V
Sbjct: 188 KLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVG 247
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+LV MY +C + A + F+ ++ ++W+ +I A+S + KAL+L+ M + +
Sbjct: 248 NALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIR 307
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P++ TFV VIN+C+ L + GK +H ++K E ++V +ALVD YAKC ++ A
Sbjct: 308 PSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKG 367
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLR--SSLAF- 355
F + +IV W ++I GY L +++ G PNE T + VL+ SSLA
Sbjct: 368 FDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAAL 427
Query: 356 -QLLQLHCLIIRMGYENYEYVLGS-LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q Q+H ++ G+ E +GS L T YAK G + D
Sbjct: 428 EQGKQIHARTVKYGF-GLEVPIGSALSTMYAKCGCLKDG--------------------- 465
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+ ++ D++SWN +I+ + NG KE LELF+ M+ PD T
Sbjct: 466 -----------TLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVT 514
Query: 474 FVSLLSACSKL 484
FV++LSACS +
Sbjct: 515 FVNILSACSHM 525
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 245/515 (47%), Gaps = 43/515 (8%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
SF + ++ + L+ G+ +H +IK+ + +ANSLVN+Y +C + A+ +F+ +
Sbjct: 8 SFFTALLQYTHNRSLQKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAKFVFERI 66
Query: 203 EIRDVVSWNTIIGALAESENFGKA--LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
+ +DVVSWN II ++ G + +EL+ RM + PN TF V + + L ++
Sbjct: 67 QNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAG 126
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
G+ HA IK DVFVGS+L++ Y K A F + +N VSW +I GYAS
Sbjct: 127 GRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYAS 186
Query: 321 KSSPTSIFLLIELLQLGYR-PNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYV 375
+ L L++ NEF F+ VL + +L+ Q+HC+ ++ G + V
Sbjct: 187 QKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSV 246
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
+L+T YAK G + DAL Q ET +
Sbjct: 247 GNALVTMYAKCGSLDDAL--------------------------QTFETSS------DKN 274
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
++W+ +I A +GD + L+LF M + I P +TFV +++ACS L G +H
Sbjct: 275 SITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHD 334
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
+ K S +V L+DMY KC SI + K F+ + + +++ WT++I NG +
Sbjct: 335 YLLKLG-FESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENE 393
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
AL + ME G P+ + + +VL AC + +G ++ R + YG E+ +
Sbjct: 394 DALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVK-YGFGLEVPIGSAL 452
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + G LK+ + MP + + W + G
Sbjct: 453 STMYAKCGCLKDGTLVFRRMP-ARDVISWNAMISG 486
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 215/411 (52%), Gaps = 13/411 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
MP+RN VS+ ++IS Y+ +AL +F M +F F +LS +L + G
Sbjct: 169 MPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNG 228
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +KNGL + VG AL+ +Y + G LD+ + FE K+ +TW+++++ +
Sbjct: 229 KQIHCIAVKNGLLSIVS-VGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQ 287
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + LF + S + +E +FVGVI+ S+ G+Q+H ++K GF+ ++ V
Sbjct: 288 SGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYV 347
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LV+MY +C+ I A K F ++ D+V W ++IG ++ AL LY RM ++ +
Sbjct: 348 MTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGI 407
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+ T V+ +C+ L GK IHA+ +K +V +GSAL YAKC L+ L
Sbjct: 408 LPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTL 467
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F + ++++SWNA+I G + L E +QL G +P+ TF ++L + L
Sbjct: 468 VFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGL 527
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYA-------KSGLISDALAFVTALNI 401
++ RM ++ E+ + + YA ++G + +A+ F + I
Sbjct: 528 VERGWGYFRMMFD--EFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATI 576
>gi|357167647|ref|XP_003581265.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g08490-like [Brachypodium
distachyon]
Length = 929
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 187/668 (27%), Positives = 336/668 (50%), Gaps = 27/668 (4%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE---PTQFTFGGLLS-CDSLNPVE 57
PD V +N +I+ SR GY +D +F M+ G + PT T ++ C L +
Sbjct: 150 PD--TVCWNILITGSSRAGYFDDVFDLFRSMVACGADESMPTAVTVAVVIPVCAKLRVLR 207
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLY---GRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
G + V+K GL +D G AL+ LY G G +D+ F + K +V+WNSI+
Sbjct: 208 AGMSIHGYVVKTGLE-SDTLCGNALISLYAKCGGSGTMDDAHRAFSSIGCKDVVSWNSII 266
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS-NEQDLEFGEQIHGLVIKNGF 172
+ ++G ++ + LF ++ + S+ ++ S E +G+++HG V + G
Sbjct: 267 AGHSENGLFKEALALFGQMTSDKCLPNYSTVANILPVCSFMEHGKYYGKEVHGFVFRVGL 326
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
++ V N+L+ Y + + +AE +F+ + RD+++WNTII + + L+L+ R
Sbjct: 327 YVDISVCNALMTHYSKVYEMRAAESIFRSMNTRDIITWNTIISGYLMNGYHSRVLDLFHR 386
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCD 291
+ + P+ + + ++ +CA + ++ G +H + ++ L + + ++LV FY++C+
Sbjct: 387 LLSTGMTPDSVSLISLLTACAQVGDAKGGMGVHGYIFRHPVLHQETSLMNSLVSFYSQCN 446
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF--LLIELLQLGYRPNEFTFSHVL 349
+ A F++I +K+ +SWNA++ A + F L E+ R + T +V+
Sbjct: 447 RFDDALHAFADILSKDSISWNAILSACAKRGKHIEEFFKLFNEMCHEVTRWDSVTILNVV 506
Query: 350 RSS----LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
R S + + H +R+GY V +++ +YAK G DA L + R +
Sbjct: 507 RVSNLCGSTKMVREAHGYSLRVGYIGETSVANAILDAYAKCGYPQDADVLFRNLAV-RNI 565
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
V N + Y + E + +Q+ + D +WN++I A NG + LF+ ++
Sbjct: 566 VTYNTMISCYLKNSSVEEAEIIFNQMSKKDQTTWNLMIQVYAQNGMCDQAFSLFRQLQC- 624
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
PD + ++L AC L + L HG + + + D + L+D Y KCG+I
Sbjct: 625 ---PDTISITNILLACIHLSLVQLVRQCHGYMLRASL--EDIHLEGSLLDAYSKCGNITD 679
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ +F ++++T+TA+I ++G A+ A+E F EM LG PD V L A+L+AC H
Sbjct: 680 AYNLFQVSPTKDLVTFTAMIGGYAMHGMAEEAVELFSEMLTLGIGPDHVVLTALLSACSH 739
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM-PFPPNALIW 644
GLV G+++F+ + Y +EP +HY C+VDLL R G L++A M P NA W
Sbjct: 740 AGLVDAGIKIFKSVREIYRIEPTAEHYTCMVDLLSRGGRLQDAYNFALDMPPHLVNANAW 799
Query: 645 RTFLEGCQ 652
+ + C+
Sbjct: 800 GSLIGACK 807
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 165/657 (25%), Positives = 285/657 (43%), Gaps = 96/657 (14%)
Query: 32 MINRGFEPTQFTFGGLL-SCDSLNPVE--GAQLQASVLKNGLFCADAFVGTALLGLYGRH 88
M+ RG P + + S +L E G L V++ G A V A++ +YGR
Sbjct: 76 MLGRGLRPDRLALAAAIKSASALRDGESLGRCLHGFVVRTG-HAAGVAVAKAVMDMYGRC 134
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV---RSEVALTESSFV 145
G L + VF++M V WN +++ + G+ +D LF +V E T +
Sbjct: 135 GTLADARLVFDEMSCPDTVCWNILITGSSRAGYFDDVFDLFRSMVACGADESMPTAVTVA 194
Query: 146 GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG---IWSAEKMFKDV 202
VI + + L G IHG V+K G + + L N+L+++Y +C G + A + F +
Sbjct: 195 VVIPVCAKLRVLRAGMSIHGYVVKTGLESDTLCGNALISLYAKCGGSGTMDDAHRAFSSI 254
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQN-SILG 261
+DVVSWN+II +E+ F +AL L+ +M+ D PN +T ++ C+ +++ G
Sbjct: 255 GCKDVVSWNSIIAGHSENGLFKEALALFGQMTSDKCLPNYSTVANILPVCSFMEHGKYYG 314
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
K +H V + L D+ V +AL+ Y+K + A F ++ ++I++WN +I GY
Sbjct: 315 KEVHGFVFRVGLYVDISVCNALMTHYSKVYEMRAAESIFRSMNTRDIITWNTIISGYLMN 374
Query: 322 SSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM 380
+ + L LL G P+ + SL Q+ MG Y + L
Sbjct: 375 GYHSRVLDLFHRLLSTGMTPDSVSL-----ISLLTACAQVGDAKGGMGVHGYIFRHPVL- 428
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
+ ++ L++ ++F Y++ ++++ + + + D +SWN
Sbjct: 429 --HQETSLMNSLVSF-------------------YSQCNRFDDALHAFADILSKDSISWN 467
Query: 441 IVIAACAHNGDY-KEVLELFKYM-----RAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
+++ACA G + +E +LF M R + N VS L +K+ A G SL
Sbjct: 468 AILSACAKRGKHIEEFFKLFNEMCHEVTRWDSVTILNVVRVSNLCGSTKMVREAHGYSLR 527
Query: 495 -GLIKKTEIISSDTFVCNMLIDMYGKCG-------------------------------S 522
G I +T V N ++D Y KCG S
Sbjct: 528 VGYIGETS-------VANAILDAYAKCGYPQDADVLFRNLAVRNIVTYNTMISCYLKNSS 580
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ + IFN+M+ ++ TW +I NG +A FR+++ PD +++ +L A
Sbjct: 581 VEEAEIIFNQMSKKDQTTWNLMIQVYAQNGMCDQAFSLFRQLQC----PDTISITNILLA 636
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY---GHLKEAEKIITTMP 636
C H LV+ R Y + ++ H LL Y G++ +A + P
Sbjct: 637 CIHLSLVQ-----LVRQCHGYMLRASLEDIHLEGSLLDAYSKCGNITDAYNLFQVSP 688
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 202/468 (43%), Gaps = 39/468 (8%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A +F V D + ++ A + + ++ L M + P++ I S +
Sbjct: 38 AHSLFDAVPATDHRHCSELLRARTANGDHSGSISLLRGMLGRGLRPDRLALAAAIKSASA 97
Query: 255 LQNS-ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
L++ LG+ +H V++ V V A++D Y +C L A L F E+S + V WN
Sbjct: 98 LRDGESLGRCLHGFVVRTGHAAGVAVAKAVMDMYGRCGTLADARLVFDEMSCPDTVCWNI 157
Query: 314 LILGYASKSSPTSIF-LLIELLQLGYR---PNEFTFSHVLRSSLAFQLLQLHCLIIRMGY 369
LI G + +F L ++ G P T + V+ ++L R G
Sbjct: 158 LITGSSRAGYFDDVFDLFRSMVACGADESMPTAVTVAVVIPVCAKLRVL-------RAGM 210
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR---TGQYNETVK 426
+ YV+ K+GL SD L N + +Y + +G ++ +
Sbjct: 211 SIHGYVV--------KTGLESDTLC-------------GNALISLYAKCGGSGTMDDAHR 249
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
S + D+VSWN +IA + NG +KE L LF M + + P+ T ++L CS + +
Sbjct: 250 AFSSIGCKDVVSWNSIIAGHSENGLFKEALALFGQMTSDKCLPNYSTVANILPVCSFMEH 309
Query: 487 LA-LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
G +HG + + + D VCN L+ Y K + ++ IF M R++ITW +I
Sbjct: 310 GKYYGKEVHGFVFRVGLY-VDISVCNALMTHYSKVYEMRAAESIFRSMNTRDIITWNTII 368
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
S +NG+ R L+ F + G PD V+LI++LTAC G + GM + + R +
Sbjct: 369 SGYLMNGYHSRVLDLFHRLLSTGMTPDSVSLISLLTACAQVGDAKGGMGVHGYIFRHPVL 428
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
E + +V + +A + +++ W L C +
Sbjct: 429 HQETSLMNSLVSFYSQCNRFDDALHAFADI-LSKDSISWNAILSACAK 475
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 206/445 (46%), Gaps = 39/445 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M R+++++N+IIS Y GY L +F +++ G P + LL+ C + +G
Sbjct: 356 MNTRDIITWNTIISGYLMNGYHSRVLDLFHRLLSTGMTPDSVSLISLLTACAQVGDAKGG 415
Query: 60 Q-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + ++ + + + +L+ Y + D+ + F D+ K ++WN+I+S K
Sbjct: 416 MGVHGYIFRHPVLHQETSLMNSLVSFYSQCNRFDDALHAFADILSKDSISWNAILSACAK 475
Query: 119 HG-FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G +E+ LF E+ + + V+ + + + HG ++ G+ E
Sbjct: 476 RGKHIEEFFKLFNEMCHEVTRWDSVTILNVVRVSNLCGSTKMVREAHGYSLRVGYIGETS 535
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS--- 234
VAN++++ Y +C A+ +F+++ +R++V++NT+I ++ + +A ++ +MS
Sbjct: 536 VANAILDAYAKCGYPQDADVLFRNLAVRNIVTYNTMISCYLKNSSVEEAEIIFNQMSKKD 595
Query: 235 ----------------VDIVF--------PNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
D F P+ + ++ +C L L + H +++
Sbjct: 596 QTTWNLMIQVYAQNGMCDQAFSLFRQLQCPDTISITNILLACIHLSLVQLVRQCHGYMLR 655
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFL 329
+LE D+ + +L+D Y+KC N+ A+ F K++V++ A+I GYA + ++ L
Sbjct: 656 ASLE-DIHLEGSLLDAYSKCGNITDAYNLFQVSPTKDLVTFTAMIGGYAMHGMAEEAVEL 714
Query: 330 LIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS-----LMTSYA 384
E+L LG P+ + +L + L+ I + E Y + ++ +
Sbjct: 715 FSEMLTLGIGPDHVVLTALLSACSHAGLVDAGIKIFKSVREIYRIEPTAEHYTCMVDLLS 774
Query: 385 KSGLISDALAFVTALNIPRAVVPAN 409
+ G + DA F AL++P +V AN
Sbjct: 775 RGGRLQDAYNF--ALDMPPHLVNAN 797
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GA 59
P +++V+F ++I Y+ G E+A+ +F M+ G P LLS C V+ G
Sbjct: 688 PTKDLVTFTAMIGGYAMHGMAEEAVELFSEMLTLGIGPDHVVLTALLSACSHAGLVDAGI 747
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK--SLVTWNSIVSIFG 117
++ SV + A T ++ L R G L + + DMP + W S++
Sbjct: 748 KIFKSVREIYRIEPTAEHYTCMVDLLSRGGRLQDAYNFALDMPPHLVNANAWGSLIGACK 807
Query: 118 KHGFVE 123
HG V
Sbjct: 808 VHGDVR 813
>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 757
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 192/626 (30%), Positives = 318/626 (50%), Gaps = 61/626 (9%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAF--VGTALLGLYGRHGCLDEVVSVFEDMPRK 104
L +C L+ ++G L A ++K D+F +G ++L Y + G LD VSVF+ M +
Sbjct: 72 LKACSYLSYIDGKCLHACLIKTAF---DSFTSIGNSILNFYIKCGELDTAVSVFDSMRSR 128
Query: 105 SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTE---SSFVGVIHGLSNEQDLEFGE 161
V+WN ++ +G + + ++ F + + VA E S+ V ++ + + + G
Sbjct: 129 DSVSWNVLIHGCLDYGALVEGLWQF---INARVAGFEPNISTLVLLVQACRSLRAKQEGL 185
Query: 162 QIHGLVIKNGFDYELLVANSLVNMY----FQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL 217
Q+HG +I++G V NS + MY CA I +F ++ +DV+SW+ +IG
Sbjct: 186 QLHGYLIQSGLWASWSVQNSFLCMYADVDMDCARI-----LFDEMPEKDVISWSAMIGGY 240
Query: 218 AESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ L+++ +M S + P+ V V+ +CA N +G+ +H I L+ D
Sbjct: 241 VQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSD 300
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQ 335
+FV ++L+D Y+KC + A FSE+ +N VSWN+L+ G +K ++ L+ +
Sbjct: 301 LFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRT 360
Query: 336 LGYRPNEFTFSHVLRS----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
G +E T + L+ + + +HC IR G E+ E VL SL+ +YAK LI
Sbjct: 361 EGIEADEVTLVNCLQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIEL 420
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
A ++ S+ R D+V W+ +IA AH G
Sbjct: 421 AW--------------------------------EVFSRTRRRDVVLWSTMIAGFAHCGK 448
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
E + +F+ M P+ T ++LL ACS L HG + + +++ V
Sbjct: 449 PDEAIAVFQKMNEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRRGL-AAEVAVGT 507
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
++DMY KCG I +S K FN++ +N+ITW+ +I+A G+NG A AL +M+ KP
Sbjct: 508 AIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSHEIKP 567
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ + ++VLTAC HGGLV G+ +F+ M + +GV+PE +HY C+VD+L R G L +A ++
Sbjct: 568 NALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSRAGKLDDAMEL 627
Query: 632 ITTMP--FPPNALIWRTFLEGCQRCR 655
I MP F A +W L C+ R
Sbjct: 628 IRMMPETFRAGASVWGALLSACRTYR 653
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 146/582 (25%), Positives = 279/582 (47%), Gaps = 46/582 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLN-PVEG 58
M R+ VS+N +I G + + L F+ GFEP T L+ +C SL EG
Sbjct: 125 MRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEG 184
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL ++++GL+ A V + L +Y +D +F++MP K +++W++++ G
Sbjct: 185 LQLHGYLIQSGLW-ASWSVQNSFLCMYADVD-MDCARILFDEMPEKDVISWSAMIG--GY 240
Query: 119 HGFVEDCMFL--FCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
++ED + L F +++ S + V V+ +N ++ G +HGL I G D +
Sbjct: 241 VQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSD 300
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L V NSL++MY +C SA ++F ++ R+ VSWN+++ L ++ + +AL L M
Sbjct: 301 LFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRT 360
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ + ++ T V + C + K++H I+ E + V ++L+D YAKC+ +E
Sbjct: 361 EGIEADEVTLVNCLQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIEL 420
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR-PNEFTFSHVLRS-SL 353
A FS +++V W+ +I G+A P + + + G PN T ++L++ S+
Sbjct: 421 AWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQACSV 480
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ +L + + +A I LA A+ I
Sbjct: 481 SAELKR---------------------SMWAHGAAIRRGLAAEVAV--------GTAIVD 511
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y++ G+ + K +Q+ + +I++W+ +IAA NG E L L M++ I P+ T
Sbjct: 512 MYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSHEIKPNALT 571
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
++S+L+ACS + +G S+ + + + + + ++DM + G + ++++ M
Sbjct: 572 YLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSRAGKLDDAMELIRMM 631
Query: 534 TDR---NVITWTALISALGL---NGFAQRALEKFREMEFLGF 569
+ W AL+SA + ++A+ + E+E L
Sbjct: 632 PETFRAGASVWGALLSACRTYRSSTLGEKAVYQVLELEPLNL 673
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 158/499 (31%), Positives = 265/499 (53%), Gaps = 42/499 (8%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
G +H +K G +++V+N ++N+Y +C + A +MF ++ R++VSW+ II +
Sbjct: 22 GLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQ 81
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ AL L+ +M + PN+ F VI++CA L G +HA+ +K FV
Sbjct: 82 TGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFV 138
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGY 338
+AL+ Y KC A L + +S N VS+NALI G+ P +++ Q G+
Sbjct: 139 SNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGF 198
Query: 339 RPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
P+ FTFS +L ++ + +QLHC +I++ E+ ++ ++T Y+K LI +A
Sbjct: 199 APDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEA-- 256
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
K+ ++ D++SWN ++ AC D++
Sbjct: 257 ------------------------------EKVFGLIKEKDLISWNTLVTACCFCKDHER 286
Query: 455 VLELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
L +F+ M + PD++TF +L+AC+ L ++ G +HG + +T D V N L
Sbjct: 287 ALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQY-QDVGVSNAL 345
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
++MY KCGSI +S +F +DRN+++W +I+A G +G RALE F +M+ +G PD
Sbjct: 346 VNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDS 405
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
V + +LTAC H GLV EG F M +YG+ P ++H+ C++DLL R G L+EAE+ +
Sbjct: 406 VTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYME 465
Query: 634 TMPFPPNALIWRTFLEGCQ 652
+PF + +I + L C+
Sbjct: 466 KLPFGHDPIILGSLLSACR 484
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 142/541 (26%), Positives = 248/541 (45%), Gaps = 77/541 (14%)
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
+ G L A+ LK G+ +D V ++ LY + G + +F++M ++LV+W++I+S
Sbjct: 20 LHGLSLHAAALKTGML-SDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISG 78
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ + G + LF ++ + E F VI ++ L G Q+H +K G
Sbjct: 79 YDQTGQPLLALNLFSQM---RIVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSV 135
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V+N+L++MY +C A + + + VS+N +I E++ K +E + M
Sbjct: 136 SFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQ 195
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
P++ TF ++ C + G +H ++IK LE F+G+ ++ Y+K + +E
Sbjct: 196 KGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEE 255
Query: 296 AHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSL 353
A F I K+++SWN L+ K ++ + ++L + + +P++FTF+ VL +
Sbjct: 256 AEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACA 315
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ Q+H +IR V +L+ YAK G I ++
Sbjct: 316 GLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSY---------------- 359
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
++ RT N +VSWN +IAA ++G LE F+ M+ I+P
Sbjct: 360 ---DVFRRTSDRN-------------LVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHP 403
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D+ TFV LL+AC+ GL+++ ++ N + + YG I
Sbjct: 404 DSVTFVGLLTACNHA----------GLVEEGQV------YFNSMEEAYG----------I 437
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-HGGL 588
F N+ ++ LI LG G Q A E ME L F D + L ++L+ACR HG +
Sbjct: 438 F-----PNIEHFSCLIDLLGRAGRLQEAEEY---MEKLPFGHDPIILGSLLSACRLHGDM 489
Query: 589 V 589
V
Sbjct: 490 V 490
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 195/406 (48%), Gaps = 42/406 (10%)
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
+++ CA ++ + G S+HA +K + D+ V + +++ Y+KC N+ A F E+S++N
Sbjct: 9 LLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRN 68
Query: 308 IVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF----QLLQLHCL 363
+VSW+A+I GY P + L Q+ PNE+ F+ V+ + + Q LQ+H
Sbjct: 69 LVSWSAIISGYDQTGQP--LLALNLFSQMRIVPNEYVFASVISACASLTALSQGLQVHAQ 126
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
+++G + +V +L++ Y K GL +DAL ++N
Sbjct: 127 SLKLGCVSVSFVSNALISMYMKCGLCTDALL-------------------VHN------- 160
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
+ P+ VS+N +IA N ++ +E FK MR PD +TF LL C+
Sbjct: 161 ------VMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTS 214
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
+ G LH + K + S F+ N++I MY K I + K+F + ++++I+W
Sbjct: 215 YDDFWRGMQLHCQMIKLNLEDS-AFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNT 273
Query: 544 LISALGLNGFAQRALEKFREMEFLGF-KPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
L++A +RAL FR+M + F KPD VL AC +R G ++ + R+
Sbjct: 274 LVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRT 333
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ ++ + +V++ + G +K + + N + W T +
Sbjct: 334 RQYQ-DVGVSNALVNMYAKCGSIKNSYDVFRRTS-DRNLVSWNTII 377
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 188/356 (52%), Gaps = 10/356 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
M DRN+VS+++IIS Y + G AL +F M P ++ F ++S C SL + +G
Sbjct: 64 MSDRNLVSWSAIISGYDQTGQPLLALNLFSQM---RIVPNEYVFASVISACASLTALSQG 120
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A LK G +FV AL+ +Y + G + + V M + V++N++++ F +
Sbjct: 121 LQVHAQSLKLGCVSV-SFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVE 179
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ E + F + + A +F G++ ++ D G Q+H +IK + +
Sbjct: 180 NQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFI 239
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N ++ MY + I AEK+F ++ +D++SWNT++ A ++ +AL ++ M +D+
Sbjct: 240 GNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDM-LDVC 298
Query: 239 F--PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
F P+ TF V+ +CAGL + GK IH +I+ DV V +ALV+ YAKC +++ +
Sbjct: 299 FVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNS 358
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRS 351
+ F S++N+VSWN +I + + E ++ +G P+ TF +L +
Sbjct: 359 YDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTA 414
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 139/262 (53%), Gaps = 10/262 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
M + N VS+N++I+ + E + F M +GF P +FTF GLL C S + G
Sbjct: 162 MSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRG 221
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI--F 116
QL ++K L AF+G ++ +Y + ++E VF + K L++WN++V+ F
Sbjct: 222 MQLHCQMIKLNLE-DSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCF 280
Query: 117 GKHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
K E + +F +++ V + +F GV+ + + G+QIHG +I+ +
Sbjct: 281 CKDH--ERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQD 338
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V+N+LVNMY +C I ++ +F+ R++VSWNTII A +ALE + +M
Sbjct: 339 VGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKT 398
Query: 236 DIVFPNQTTFVYVINSC--AGL 255
+ P+ TFV ++ +C AGL
Sbjct: 399 VGIHPDSVTFVGLLTACNHAGL 420
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 133/278 (47%), Gaps = 19/278 (6%)
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
SL + K+G++SD ++ +N + +Y++ G ++ ++ ++V
Sbjct: 24 SLHAAALKTGMLSD-------------IIVSNHVINLYSKCGNVIFARRMFDEMSDRNLV 70
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SW+ +I+ G L LF MR I P+ Y F S++SAC+ L L+ G +H
Sbjct: 71 SWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGLQVHAQS 127
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
K +S +FV N LI MY KCG ++ + N M++ N +++ ALI+ N ++
Sbjct: 128 LKLGCVSV-SFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKG 186
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
+E F+ M GF PDR +L C GM+L +M + +E + ++
Sbjct: 187 IEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIK-LNLEDSAFIGNVIIT 245
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
+ ++ ++EAEK+ + + + W T + C C+
Sbjct: 246 MYSKFNLIEEAEKVFGLIK-EKDLISWNTLVTACCFCK 282
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 70/120 (58%), Gaps = 4/120 (3%)
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
SLL C+K+ G SLH KT ++ SD V N +I++Y KCG++ + ++F+EM+D
Sbjct: 8 SLLHHCAKIKAFLHGLSLHAAALKTGML-SDIIVSNHVINLYSKCGNVIFARRMFDEMSD 66
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
RN+++W+A+IS G AL F +M + P+ +V++AC + +G+++
Sbjct: 67 RNLVSWSAIISGYDQTGQPLLALNLFSQMRIV---PNEYVFASVISACASLTALSQGLQV 123
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 171/567 (30%), Positives = 294/567 (51%), Gaps = 23/567 (4%)
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
WN ++ GF+ED + L+ + R +F V+ G +H +V
Sbjct: 113 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 172
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR---DVVSWNTIIGALAESENFGK 225
+GF++ + V N LV+MY +C +A ++F ++ R D+VSWN+I+ A + + +
Sbjct: 173 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 232
Query: 226 ALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
A++++ RM+ D+ + P+ + V V+ +CA + GK +H +++ L DVFVG+A+V
Sbjct: 233 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 292
Query: 285 DFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEF 343
D YAKC +E A+ F + K++VSWNA++ GY+ ++ L ++ + N
Sbjct: 293 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 352
Query: 344 TFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI-------SDA 392
T+S V+ + L F+ L + ++ G E L SL++ A +G + A
Sbjct: 353 TWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHA 412
Query: 393 LAFVTAL--NIP-RAVVPANIIAGIYNRTGQYNETVKLLSQLERPD--IVSWNIVIAACA 447
+ ++ L N P ++ N + +Y++ + + D +V+W ++I A
Sbjct: 413 IKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNA 472
Query: 448 HNGDYKEVLELFKYMRAAR--IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
+G+ E LELF M + P+ +T L AC++L L G +H + + S+
Sbjct: 473 QHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESA 532
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
FV N LIDMY K G + ++ +F+ M RN ++WT+L++ G++G + AL+ F EM+
Sbjct: 533 MLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ 592
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
+ PD V + VL AC H G+V +G+ F MN+ +GV P +HY C+VDLL R G L
Sbjct: 593 KVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRL 652
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQ 652
EA ++I MP P +W L C+
Sbjct: 653 DEAMELIRGMPMKPTPAVWVALLSACR 679
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 152/600 (25%), Positives = 274/600 (45%), Gaps = 88/600 (14%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQ 62
V +N +I G++ED L+++ M G+ P +TF +L +C + GA +
Sbjct: 109 TVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVH 168
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK---SLVTWNSIVSIFGKH 119
A V +G F + FVG L+ +YGR G + VF++M + LV+WNSIV+ + +
Sbjct: 169 AVVFASG-FEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQG 227
Query: 120 GFVEDCMFLFCELVRSEVALTES--SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G M +F E + ++ + S V V+ ++ G+Q+HG +++G ++
Sbjct: 228 GDSIRAMKMF-ERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 286
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM---- 233
V N++V+MY +C + A K+F+ ++++DVVSWN ++ ++ F AL L+ ++
Sbjct: 287 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 346
Query: 234 -----------------------SVDIVF--------PNQTTFVYVINSCAGLQNSILGK 262
++D+ PN T V +++ CA + GK
Sbjct: 347 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGK 406
Query: 263 SIHAKVIK-------NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN--IVSWNA 313
H IK N D+ V +AL+D Y+KC + + A F I K+ +V+W
Sbjct: 407 ETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTV 466
Query: 314 LILGYASKSSPT-SIFLLIELLQLG--YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYE 370
LI G A ++ L ++LQ PN FT S L + L R G +
Sbjct: 467 LIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGAL-------RFGRQ 519
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ YVL + S A+ FV AN + +Y+++G + +
Sbjct: 520 IHAYVLRNRFES---------AMLFV-----------ANCLIDMYSKSGDVDAARVVFDN 559
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+ + + VSW ++ +G +E L++F M+ + PD TFV +L ACS + G
Sbjct: 560 MHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQG 619
Query: 491 -SSLHGLIKKTEII-SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV-ITWTALISA 547
+ +G+ K ++ ++ + C ++D+ + G + ++++ M + W AL+SA
Sbjct: 620 INYFNGMNKDFGVVPGAEHYAC--MVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSA 677
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 4/162 (2%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG--FEPTQFTFG-GLLSCDSLNPVE-G 58
DR+VV++ +I ++ G +AL +F M+ P FT L++C L + G
Sbjct: 458 DRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFG 517
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A VL+N A FV L+ +Y + G +D VF++M +++ V+W S+++ +G
Sbjct: 518 RQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGM 577
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
HG E+ + +F E+ + + +FV V++ S+ ++ G
Sbjct: 578 HGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQG 619
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 175/564 (31%), Positives = 287/564 (50%), Gaps = 44/564 (7%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F MP K+ V+WN++++ + + G + + LFC++ E ++ + V+ G +N
Sbjct: 7 LFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGS 66
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L G+ +H L +++G + + + SLV+MY +C ++ A K+F + DVV+W+ +I
Sbjct: 67 LREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITG 126
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
L + + +A EL+ M PNQ T ++++ + + G+SIH + K E D
Sbjct: 127 LDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESD 186
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQ 335
V + L+ Y K +E + F ++N ++VSWNAL+ G Y S++ + ++L
Sbjct: 187 NLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLL 246
Query: 336 LGYRPNEFTFSHVLRSSLAFQLL------QLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
G++PN FTF VLRS + LL Q+H II+ ++ ++V +L+ YAK+ +
Sbjct: 247 EGFKPNMFTFISVLRSCSS--LLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCL 304
Query: 390 SDA-LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
DA +AF +N R + +I Y +T Q + VK Q++R
Sbjct: 305 EDAGVAFDRLVN--RDIFSWTVIISGYAQTDQAEKAVKYFRQMQREG------------- 349
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
I P+ YT S LS CS + L G LH + K D F
Sbjct: 350 ------------------IKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHF-GDIF 390
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V + L+D+YGKCG + + IF + R++++W +IS +G ++ALE FR M G
Sbjct: 391 VGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEG 450
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
PD I VL+AC GLV EG + F+ M++ YG+ P ++HY C+VD+L R G E
Sbjct: 451 IMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEV 510
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
+ I M P +LIW T L C+
Sbjct: 511 KIFIEEMNLTPYSLIWETVLGACK 534
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 168/581 (28%), Positives = 298/581 (51%), Gaps = 54/581 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
MP++N VS+N++++ Y++ G + L++F M + ++FT +L C + + EG
Sbjct: 11 MPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREG 70
Query: 59 AQLQASVLKNGLFCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
L A L++G C D F+G +L+ +Y + G + + + VF + +V W+++++
Sbjct: 71 KVLHALALRSG--CEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLD 128
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G ++ LF + R + + ++ +N DL +G+ IHG + K GF+ + L
Sbjct: 129 QQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNL 188
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V+N L+ MY + + K+F+ + D+VSWN ++ +S+ G+ ++ +M ++
Sbjct: 189 VSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEG 248
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN TF+ V+ SC+ L + GK +HA +IKN+ + D FVG+ALVD YAK LE A
Sbjct: 249 FKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAG 308
Query: 298 LCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
+ F + N++I SW +I GYA + + ++ ++ + G +PNE+T + L
Sbjct: 309 VAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMA 368
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L QLH + ++ G+ +V +L+ Y K G + A A I
Sbjct: 369 TLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEA---------------IFK 413
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
G+ +R DIVSWN +I+ + +G ++ LE F+ M + I PD
Sbjct: 414 GLISR-----------------DIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEA 456
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF+ +LSACS + + G + K I S + + C ++D+ G+ G + VKIF
Sbjct: 457 TFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYAC--MVDILGRAGKF-NEVKIF 513
Query: 531 NE---MTDRNVITWTALISALGLNG---FAQRALEKFREME 565
E +T ++I W ++ A L+G F ++A +K EME
Sbjct: 514 IEEMNLTPYSLI-WETVLGACKLHGNVDFGEKAAKKLFEME 553
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 213/467 (45%), Gaps = 52/467 (11%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
AE++F + ++ VSWN ++ A+ + K L+L+ +M ++ T V+ CA
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
+ GK +HA +++ E D F+G +LVD Y+KC + A F++I N ++V+W+A+
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 315 ILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGY 369
I G + L L++ G RPN+FT S ++ ++ L+ +H I + G+
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
E+ V L+ Y KS + D K+
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDG--------------------------------NKVFE 211
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
+ PD+VSWN +++ + +F M P+ +TF+S+L +CS L +
Sbjct: 212 AMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEF 271
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G +H I K D FV L+DMY K + + F+ + +R++ +WT +IS
Sbjct: 272 GKQVHAHIIKNS-SDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYA 330
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
A++A++ FR+M+ G KP+ L + L+ C H + G +L + V +
Sbjct: 331 QTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQL-------HAVAVKA 383
Query: 610 DHY------HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
H+ +VDL + G ++ AE I + + + W T + G
Sbjct: 384 GHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL-ISRDIVSWNTIISG 429
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 136/296 (45%), Gaps = 38/296 (12%)
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRS 351
+E A F + KN VSWNAL+ GYA + L ++ + + ++FT S VL+
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 352 SLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
L+ LH L +R G E E++ SL+ Y+K G + DAL
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDAL-------------- 106
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
K+ +++ PD+V+W+ +I G +E ELF MR
Sbjct: 107 ------------------KVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGA 148
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P+ +T SL+S + + +L G S+HG I K SD V N LI MY K +
Sbjct: 149 RPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG-FESDNLVSNPLIMMYMKSRCVEDGN 207
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
K+F MT+ ++++W AL+S + R F +M GFKP+ I+VL +C
Sbjct: 208 KVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSC 263
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 176/551 (31%), Positives = 296/551 (53%), Gaps = 9/551 (1%)
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
+NS++ + G + + LF ++ S ++ + +F + + + G QIHGL++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
K G+ +L V NSLV+ Y +C + SA K+F ++ R+VVSW ++I A + A++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 229 LYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
L+ RM D V PN T V VI++CA L++ G+ ++A + + +E + + SALVD Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFS 346
KC+ ++ A F E N+ NA+ Y + + ++ + ++ G RP+ +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 347 HVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
+ S + + H ++R G+E+++ + +L+ Y K A ++
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
V +I+AG Y G+ + + + +IVSWN +I+ ++E +E+F M
Sbjct: 402 TVVTWNSIVAG-YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 463 RAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
++ + D T +S+ SAC L L L ++ I+K I D + L+DM+ +CG
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGI-QLDVRLGTTLVDMFSRCG 519
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
S++ IFN +T+R+V WTA I A+ + G A+RA+E F +M G KPD VA + LT
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC HGGLV++G E+F M + +GV PE HY C+VDLL R G L+EA ++I MP PN
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 642 LIWRTFLEGCQ 652
+IW + L C+
Sbjct: 640 VIWNSLLAACR 650
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/582 (25%), Positives = 281/582 (48%), Gaps = 12/582 (2%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSC-DSLNPVEGAQLQASVL 66
+NS+I Y+ G +A+ +FL M+N G P ++TF GL +C S G Q+ ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K G + D FV +L+ Y G LD VF++M +++V+W S++ + + F +D +
Sbjct: 162 KMG-YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 127 FLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
LF +VR E S + V VI + +DLE GE+++ + +G + L+ ++LV+M
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C I A+++F + ++ N + +AL ++ M V P++ +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
+ I+SC+ L+N + GKS H V++N E + +AL+D Y KC + A F +SN
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
K +V+WN+++ GY + + E + + S +++ SL + +++ C +
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 365 IRMGYENYEYV-LGSLMTSYAKSGLISDA---LAFVTALNIPRAVVPANIIAGIYNRTGQ 420
N + V + S+ ++ G + A ++ I V + +++R G
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+ + + L D+ +W I A A G+ + +ELF M + PD FV L+A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVI 539
CS + G + + K +S + ++D+ G+ G + +V++ +M + N +
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
W +L++A + G + A +++ L P+R +L+
Sbjct: 641 IWNSLLAACRVQGNVEMAAYAAEKIQVLA--PERTGSYVLLS 680
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 231/492 (46%), Gaps = 73/492 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI-NRGFEPTQFTFGGLLS-CDSLNPVE- 57
M +RNVVS+ S+I Y+R + +DA+ +F M+ + P T ++S C L +E
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ A + +G+ D V +AL+ +Y + +D +F++ +L N++ S +
Sbjct: 255 GEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G + + +F ++ S V S + I S +++ +G+ HG V++NGF+
Sbjct: 314 RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN 373
Query: 178 VANSLVNMYFQC-------------------------AG------IWSAEKMFKDVEIRD 206
+ N+L++MY +C AG + +A + F+ + ++
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 207 VVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
+VSWNTII L + F +A+E++ M S + V + T + + ++C L L K I+
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY 493
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN-ALILGYASKSSP 324
+ KN ++ DV +G+ LVD +++C + E A F+ ++N+++ +W A+ + ++
Sbjct: 494 YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAE 553
Query: 325 TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
+I L ++++ G +P+ F +G+L T+ +
Sbjct: 554 RAIELFDDMIEQGLKPDGVAF------------------------------VGAL-TACS 582
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAG----IYNRTGQYNETVKLLSQLE-RPDIVSW 439
GL+ ++ V P ++ G + R G E V+L+ + P+ V W
Sbjct: 583 HGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIW 642
Query: 440 NIVIAACAHNGD 451
N ++AAC G+
Sbjct: 643 NSLLAACRVQGN 654
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 131/268 (48%), Gaps = 13/268 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLLS-CDSLNPVEG 58
MP++N+VS+N+IIS + E+A+ +F M ++ G T + S C L ++
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 59 AQ-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
A+ + + KNG+ D +GT L+ ++ R G + +S+F + + + W + +
Sbjct: 489 AKWIYYYIEKNGIQL-DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMA 547
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYEL 176
G E + LF +++ + +FVG + S+ ++ G++I ++K +G E
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPED 607
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKD--VEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ +V++ + + A ++ +D +E DV+ WN+++ A N A Y
Sbjct: 608 VHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQGNVEMA--AYAAEK 664
Query: 235 VDIVFPNQT-TFVYVIN--SCAGLQNSI 259
+ ++ P +T ++V + N + AG N +
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDM 692
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 192/673 (28%), Positives = 324/673 (48%), Gaps = 60/673 (8%)
Query: 35 RGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGL-------------------FCADA 75
R PT F L C S+N V Q+ ++ GL + +
Sbjct: 27 RDVSPTHFA-SLLKECRSVNTVR--QIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSPK 83
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
+GT ++ Y G + +SV E + V WN +V K G ++ + + C ++R+
Sbjct: 84 SLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRA 143
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
+ + G +HGL+ NGF+ + V N+LV MY +C + A
Sbjct: 144 GTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDA 203
Query: 196 EKMFKDVE---IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT-------TF 245
+F ++ I DV+SWN+I+ A + N ALEL+ MS+ IV T +
Sbjct: 204 SLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSM-IVHEKATNERSDIISI 262
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
V ++ +CA L+ K IH+ I+N D FV +AL+D YAKC ++ A F+ +
Sbjct: 263 VNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEF 322
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVL----RSSLAFQLLQL 360
K++VSWNA++ GY + + F L E ++ P + T+S V+ + + + L
Sbjct: 323 KDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDA 382
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA------------ 408
+I G E + SL+++ A G +S + + A ++ + ++
Sbjct: 383 FQQMILDGSEPNSVTIISLLSACASLGALSQGME-IHAYSLKKCLLSLDNDFGGDGDGED 441
Query: 409 ----NIIAGIYNRTGQYNETVKLLSQLERPD--IVSWNIVIAACAHNGDYKEVLELFKYM 462
N + +Y++ + + + R + +V+W ++I A GD + L++F M
Sbjct: 442 LMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEM 501
Query: 463 --RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI-KKTEIISSDTFVCNMLIDMYGK 519
+ + P+ YT +L AC+ L L +G +H + + E S FV N LIDMY K
Sbjct: 502 ISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSK 561
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
CG + ++ +F+ M RN ++WT+++S G++G + AL+ F +M+ GF PD ++ + +
Sbjct: 562 CGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVL 621
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
L AC H G+V +G+ F+ M R Y V +HY CV+DLL R G L +A K I MP P
Sbjct: 622 LYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEP 681
Query: 640 NALIWRTFLEGCQ 652
+A+IW L C+
Sbjct: 682 SAVIWVALLSACR 694
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 181/403 (44%), Gaps = 63/403 (15%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-------CDSLNPV- 56
+V+S+NSI++A+ + AL +F M E ++S C SL +
Sbjct: 217 DVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALP 276
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ ++ + ++NG F ADAFV AL+ Y + G +++ V VF M K +V+WN++V+ +
Sbjct: 277 QIKEIHSYAIRNGTF-ADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGY 335
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE---QD----------------- 156
+ G LF + + + L ++ VI G + Q+
Sbjct: 336 TQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNS 395
Query: 157 ---------------LEFGEQIHGLVIKNGF------------DYELLVANSLVNMYFQC 189
L G +IH +K +L+V N+L++MY +C
Sbjct: 396 VTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKC 455
Query: 190 AGIWSAEKMFKDVEIRD--VVSWNTIIGALAESENFGKALELYLRMSVD--IVFPNQTTF 245
+A +F + R+ VV+W +IG A+ + AL+++ M V PN T
Sbjct: 456 RSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTI 515
Query: 246 VYVINSCAGLQNSILGKSIHAKVIK-NALECDV-FVGSALVDFYAKCDNLEGAHLCFSEI 303
++ +CA L +GK IHA V + + E V FV + L+D Y+KC +++ A F +
Sbjct: 516 SCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSM 575
Query: 304 SNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTF 345
+N VSW +++ GY + + +Q G+ P++ +F
Sbjct: 576 PKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISF 618
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 163/344 (47%), Gaps = 45/344 (13%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGAQLQ 62
+V++++++I+ Y++ G ++AL F MI G EP T LLS C SL + +G ++
Sbjct: 359 DVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIH 418
Query: 63 ASVLKNGLFC-----------ADAFVGTALLGLYGRHGCLDEVVSVFEDMPR--KSLVTW 109
A LK L D V AL+ +Y + S+F+ +PR +++VTW
Sbjct: 419 AYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTW 478
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFV--GVIHGLSNEQDLEFGEQIHGLV 167
++ + ++G D + +F E++ A+ +++ ++ ++ L G+QIH V
Sbjct: 479 TVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYV 538
Query: 168 IKNGFDYE---LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
++ +YE VAN L++MY +C + +A +F + R+ VSW +++
Sbjct: 539 TRH-HEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGK 597
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL--------ECD 276
+AL+++ +M P+ +F+ ++ +C+ H+ ++ L + D
Sbjct: 598 EALDIFDKMQKAGFVPDDISFLVLLYACS-----------HSGMVDQGLNYFDIMRRDYD 646
Query: 277 VFVG----SALVDFYAKCDNLEGAHLCFSEIS-NKNIVSWNALI 315
V + ++D A+C L+ A E+ + V W AL+
Sbjct: 647 VVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALL 690
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 131/258 (50%), Gaps = 14/258 (5%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGF--EPTQFTFGG-LLSCDSLNPVE-G 58
+RNVV++ +I Y++ G DAL++F MI++ + P +T L++C L + G
Sbjct: 472 ERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMG 531
Query: 59 AQLQASVLKNGLFCADA-FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ A V ++ + FV L+ +Y + G +D +VF+ MP+++ V+W S++S +G
Sbjct: 532 KQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYG 591
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
HG ++ + +F ++ ++ + SF+ +++ S+ ++ G ++ + DY+++
Sbjct: 592 MHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRR---DYDVV 648
Query: 178 VANS----LVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLR 232
+ ++++ +C + A K +++ + V W ++ A N A E L
Sbjct: 649 ASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELA-EYALN 707
Query: 233 MSVDIVFPNQTTFVYVIN 250
V++ N ++ + N
Sbjct: 708 KLVNMKAENDGSYTLISN 725
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP RN VS+ S++S Y G ++AL +F M GF P +F LL +C V+
Sbjct: 575 MPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG 634
Query: 60 QLQASVLKNGL-FCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
+++ A A ++ L R G LD+ ++MP S V W +++S
Sbjct: 635 LNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACR 694
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
H VE + +LV + A + S+ + + +N + + +I L+ K+G
Sbjct: 695 VHSNVELAEYALNKLVNMK-AENDGSYTLISNIYANARRWKDVARIRQLMKKSGI 748
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 176/551 (31%), Positives = 296/551 (53%), Gaps = 9/551 (1%)
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
+NS++ + G + + LF ++ S ++ + +F + + + G QIHGL++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
K G+ +L V NSLV+ Y +C + SA K+F ++ R+VVSW ++I A + A++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 229 LYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
L+ RM D V PN T V VI++CA L++ G+ ++A + + +E + + SALVD Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFS 346
KC+ ++ A F E N+ NA+ Y + + ++ + ++ G RP+ +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 347 HVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
+ S + + H ++R G+E+++ + +L+ Y K A ++
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
V +I+AG Y G+ + + + +IVSWN +I+ ++E +E+F M
Sbjct: 402 TVVTWNSIVAG-YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 463 RAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
++ + D T +S+ SAC L L L ++ I+K I D + L+DM+ +CG
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGI-QLDVRLGTTLVDMFSRCG 519
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
S++ IFN +T+R+V WTA I A+ + G A+RA+E F +M G KPD VA + LT
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC HGGLV++G E+F M + +GV PE HY C+VDLL R G L+EA ++I MP PN
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 642 LIWRTFLEGCQ 652
+IW + L C+
Sbjct: 640 VIWNSLLAACR 650
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 147/582 (25%), Positives = 281/582 (48%), Gaps = 12/582 (2%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSC-DSLNPVEGAQLQASVL 66
+NS+I Y+ G +A+ +FL M+N G P ++TF GL +C S G Q+ ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K G + D FV +L+ Y G LD VF++M +++V+W S++ + + F +D +
Sbjct: 162 KMG-YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 127 FLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
LF +VR E S + V VI + +DLE GE+++ + +G + L+ ++LV+M
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C I A+++F + ++ N + +AL ++ M V P++ +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
+ I+SC+ L+N + GKS H V++N E + +AL+D Y KC + A F +SN
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
K +V+WN+++ GY + + E + + S +++ SL + +++ C +
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 365 IRMGYENYEYV-LGSLMTSYAKSGLISDA---LAFVTALNIPRAVVPANIIAGIYNRTGQ 420
N + V + S+ ++ G + A ++ I V + +++R G
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+ + + L D+ +W I A A G+ + +ELF M + PD FV L+A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVI 539
CS + G + + K +S + ++D+ G+ G + +V++ +M + N +
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
W +L++A + G + A +++ L P+R +L+
Sbjct: 641 IWNSLLAACRVQGNVEMAAYAAEKIQVLA--PERTGSYVLLS 680
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 231/492 (46%), Gaps = 73/492 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI-NRGFEPTQFTFGGLLS-CDSLNPVE- 57
M +RNVVS+ S+I Y+R + +DA+ +F M+ + P T ++S C L +E
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ A + +G+ D V +AL+ +Y + +D +F++ +L N++ S +
Sbjct: 255 GEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G + + +F ++ S V S + I S +++ +G+ HG V++NGF+
Sbjct: 314 RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN 373
Query: 178 VANSLVNMYFQC-------------------------AG------IWSAEKMFKDVEIRD 206
+ N+L++MY +C AG + +A + F+ + ++
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 207 VVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
+VSWNTII L + F +A+E++ M S + V + T + + ++C L L K I+
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY 493
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN-ALILGYASKSSP 324
+ KN ++ DV +G+ LVD +++C + E A F+ ++N+++ +W A+ + ++
Sbjct: 494 YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAE 553
Query: 325 TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
+I L ++++ G +P+ F +G+L T+ +
Sbjct: 554 RAIELFDDMIEQGLKPDGVAF------------------------------VGAL-TACS 582
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAG----IYNRTGQYNETVKLLSQLE-RPDIVSW 439
GL+ ++ V P ++ G + R G E V+L+ + P+ V W
Sbjct: 583 HGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIW 642
Query: 440 NIVIAACAHNGD 451
N ++AAC G+
Sbjct: 643 NSLLAACRVQGN 654
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 131/268 (48%), Gaps = 13/268 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLLS-CDSLNPVEG 58
MP++N+VS+N+IIS + E+A+ +F M ++ G T + S C L ++
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 59 AQ-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
A+ + + KNG+ D +GT L+ ++ R G + +S+F + + + W + +
Sbjct: 489 AKWIYYYIEKNGIQ-LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMA 547
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYEL 176
G E + LF +++ + +FVG + S+ ++ G++I ++K +G E
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPED 607
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKD--VEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ +V++ + + A ++ +D +E DV+ WN+++ A N A Y
Sbjct: 608 VHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQGNVEMA--AYAAEK 664
Query: 235 VDIVFPNQT-TFVYVIN--SCAGLQNSI 259
+ ++ P +T ++V + N + AG N +
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDM 692
>gi|302809659|ref|XP_002986522.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
gi|300145705|gb|EFJ12379.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
Length = 625
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 173/624 (27%), Positives = 303/624 (48%), Gaps = 37/624 (5%)
Query: 32 MINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGC 90
M+ GF P TF G+ S C ++ +QAS+ + F ++ V +L+ Y R G
Sbjct: 1 MLLEGFRPNGVTFSGVASSCSGREELD--TIQASIAASD-FHSNVVVKNSLVSAYTRSGD 57
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG 150
L VF+ + K L++WNS+V + +HG E+ + LF ++ ++T +S +G
Sbjct: 58 LRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKMDVEPDSITYASILGACSA 117
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
+ + LE G+++H V ++ F + +A +L+NMY +C + SA ++F ++ D W
Sbjct: 118 M---ELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPW 174
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
N +I L + +AL L+ RM + V ++ +++ ++++C L++ G IH
Sbjct: 175 NAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASA 234
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-NIVSWNALILGYASKSSPTSIFL 329
++ D+ V +A+ + Y+KC ++ A F ++ K N+VSWN++I YA
Sbjct: 235 CGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREALE 294
Query: 330 LIELL-QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
L EL+ + G +P++ T++ L + TSY S
Sbjct: 295 LYELMKEEGVQPDDITYAGALGAC----------------------------TSYGGSAK 326
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
++ + +T I V I +Y + G+ + ++ R + V+W+ ++ A
Sbjct: 327 GAEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQ 386
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
G +E L+L+ M + P T L+ACS++ L G ++H I+ TE + + F
Sbjct: 387 QGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLF 446
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+ N L++MY KCG + + +F+ + R+ +W +I +G L EM G
Sbjct: 447 LQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDG 506
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
PD V VL AC H GL+ G F M Y ++P +DHY C+VD+L R G +EA
Sbjct: 507 VDPDYVTFACVLLACSHAGLLDRGRSHFLSMTGDYCIKPMLDHYECLVDVLSRAGWAREA 566
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
E + MPF P + W T L C+
Sbjct: 567 EALAMAMPFTPRPVTWTTLLGACK 590
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 167/583 (28%), Positives = 284/583 (48%), Gaps = 52/583 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+ +++++S+NS++ AYS+ G+ E+ L +F M EP T+ +L +C ++ +E G
Sbjct: 68 IENKDLISWNSMVVAYSQHGHGEEMLELFRKM---DVEPDSITYASILGACSAMELLELG 124
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ A V ++ F +D + AL+ +Y + G L+ VF+ + WN+++S +
Sbjct: 125 KEVHARVSRS-RFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQ 183
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG + + LF + V + + S++ ++ +DL G +IH G D +L+V
Sbjct: 184 HGRAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASACGMDKDLVV 243
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
++ NMY +C + A KMF + E +VVSWN++I A A+S +ALELY M +
Sbjct: 244 ETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREALELYELMKEEG 303
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ T+ + +C S G IH+++ ++ + DVF+ +A+V+ YAKC LE A
Sbjct: 304 VQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAM 363
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F ++ KN V+W+A++ + + ++ L + ++ G++P+E T + L +
Sbjct: 364 SYFEKMRRKNAVTWSAMVGAFIQQGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIG 423
Query: 357 LLQ----LHCLI-IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
LQ +H I +N ++ SL+ YAK G ++
Sbjct: 424 ALQEGKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCLA--------------------- 462
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
I N + S L+R D SWN +I AH+GD EVL L M + PD
Sbjct: 463 --IAN---------TMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDY 511
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKI 529
TF +L ACS L G S + I D + C L+D+ + G + +
Sbjct: 512 VTFACVLLACSHAGLLDRGRSHFLSMTGDYCIKPMLDHYEC--LVDVLSRAGWAREAEAL 569
Query: 530 FNEM--TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
M T R V TWT L+ A L+G +R +E R + LGF+
Sbjct: 570 AMAMPFTPRPV-TWTTLLGACKLHGETKRGVEAARSLLELGFE 611
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 291/553 (52%), Gaps = 32/553 (5%)
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
MP + +V+WNS+VS F +G D ++RS L +S V V+ EQ+ +FG
Sbjct: 1 MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
IH L +K G + + +AN+LV+MY + + ++ ++F + ++ VSWN+ IG +
Sbjct: 61 LSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNA 120
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
+G L ++ +MS V P T ++ + L + LG+ +H IK A++ D+FV
Sbjct: 121 GFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVA 180
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYR 339
++LVD YAK +LE A F ++ ++N+VSWNA+I + T F L+ +Q G
Sbjct: 181 NSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGEC 240
Query: 340 PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
PN T +VL + L +MG + + + + + GL+ D
Sbjct: 241 PNSITLVNVLPACARMASL-------KMGKQIHAWSI--------RRGLMFD-------- 277
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ +N + +Y++ GQ + + + E+ D VS+N +I + + E L LF
Sbjct: 278 -----LFISNALIDMYSKCGQLSLARNIFERSEKDD-VSYNTLILGYSQSPWCFESLLLF 331
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
K MR+ I D +F+ LSAC+ L G +H ++ + ++S F+ N L+D+Y K
Sbjct: 332 KQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVR-RLLSGHPFLSNSLLDLYTK 390
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
G + ++ KIFN++T ++V +W +I G++G A E F M+ G D V+ IAV
Sbjct: 391 GGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAV 450
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
L AC HGGLV +G + F +M + +EP+ HY C+VDLL R G L + +II MPFP
Sbjct: 451 LAACSHGGLVDKGKKYFSQM-VAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPA 509
Query: 640 NALIWRTFLEGCQ 652
N+ +W L C+
Sbjct: 510 NSDVWGALLGACR 522
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 160/587 (27%), Positives = 275/587 (46%), Gaps = 68/587 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--G 58
MP+R+VVS+NS++SA+ G DA R + M+ GF + ++ E G
Sbjct: 1 MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A +K GL + AL+ +YG+ G ++ + VF+ M ++ V+WNS + F
Sbjct: 61 LSIHALAVKVGLNTM-VNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLN 119
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
GF D + +F ++ V + ++ L + G ++HG IK D ++ V
Sbjct: 120 AGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFV 179
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
ANSLV+MY + + A +F+ ++ R+VVSWN +I L ++ +A L M
Sbjct: 180 ANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGE 239
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T V V+ +CA + + +GK IHA I+ L D+F+ +AL+D Y+KC L A
Sbjct: 240 CPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARN 299
Query: 299 CFSEISNKNIVSWNALILGYASKSSP---TSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F E S K+ VS+N LILGY+ SP S+ L ++ +G + +F L +
Sbjct: 300 IF-ERSEKDDVSYNTLILGYS--QSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNL 356
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ ++HC+++R + ++ SL+ Y K G++ VTA
Sbjct: 357 SVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGML------VTA------------- 397
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
K+ +++ + D+ SWN +I +G ELF+ M+ + D+
Sbjct: 398 -------------SKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDH 444
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM---------LIDMYGKCGS 522
+++++L+ACS GL+ K + S N+ ++D+ G+ G
Sbjct: 445 VSYIAVLAACSH----------GGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQ 494
Query: 523 IGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
+ +I +M N W AL+ A ++G AQ A E E++
Sbjct: 495 LSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELK 541
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 186/675 (27%), Positives = 321/675 (47%), Gaps = 82/675 (12%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ A ++ NG+ + F+G+ LL +Y + GC+++ +F+ M +++ +W +I+ ++
Sbjct: 108 GFQVHAQLVVNGVDVCE-FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYC 166
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G E+ + LF +V V F V S ++ G+ ++ ++ GF+
Sbjct: 167 GLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSC 226
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDV------------------------------ 207
V S+++M+ +C + A + F+++E +DV
Sbjct: 227 VKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSG 286
Query: 208 -----VSWNTIIGALAESENFGKA------------------------------------ 226
V+WN II A+S F +A
Sbjct: 287 VKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEA 346
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVD 285
L ++ +M ++ V PN T +++C L G+ IH IK L+ D+ VG++LVD
Sbjct: 347 LSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVD 406
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFT 344
+YAKC ++E A F I ++VSWNA++ GYA + S +I LL E+ G P+ T
Sbjct: 407 YYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIIT 466
Query: 345 FSHVLRSSLAF----QLLQLHCLIIRMGYE-NYEYVLGSLMT--SYAKSGLISDALAFVT 397
++ ++ + L+ + MG + N + G+L L + +V
Sbjct: 467 WNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVL 526
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
+I + + + +Y+ + S+L D+V WN +I+ACA +G L+
Sbjct: 527 RNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALD 586
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
L + M + + + T VS L ACSKL L G +H I + + + + F+ N LIDMY
Sbjct: 587 LLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCN-FILNSLIDMY 645
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
G+CGSI S +IF+ M R++++W +IS G++GF A+ F+ +G KP+ +
Sbjct: 646 GRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFT 705
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
+L+AC H GL+ EG + F+ M Y ++P ++ Y C+VDLL R G E + I MPF
Sbjct: 706 NLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPF 765
Query: 638 PPNALIWRTFLEGCQ 652
PNA +W + L C+
Sbjct: 766 EPNAAVWGSLLGACR 780
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 208/453 (45%), Gaps = 60/453 (13%)
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
+L G Q+H ++ NG D + + L+ +Y Q + A +MF + R+V SW I+
Sbjct: 104 NLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIME 163
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
++ + ++L+ M + V P+ F V +C+ L+N +GK ++ ++ E
Sbjct: 164 MYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEG 223
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
+ V +++D + KC ++ A F EI K++ WN ++ GY SK I ++
Sbjct: 224 NSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMK 283
Query: 336 L-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
L G +P++ T++ ++++ YA+SG +A
Sbjct: 284 LSGVKPDQVTWN-------------------------------AIISGYAQSGQFEEASK 312
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
+ + G+ + +P++VSW +IA NG E
Sbjct: 313 YFLEM------------GGLKDF---------------KPNVVSWTALIAGSEQNGYDFE 345
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
L +F+ M + P++ T S +SAC+ L L G +HG K E + SD V N L+
Sbjct: 346 ALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLV 405
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
D Y KC S+ + + F + ++++W A+++ L G + A+E EM+F G +PD +
Sbjct: 406 DYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDII 465
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
++T G + +E F+RM+ S G++P
Sbjct: 466 TWNGLVTGFTQYGDGKAALEFFQRMH-SMGMDP 497
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 145/596 (24%), Positives = 257/596 (43%), Gaps = 106/596 (17%)
Query: 11 SIISAYSRCGYVEDALRMF-------LYMIN---RGFEPTQFTFGGLLSCDSLNPVEGAQ 60
SI+ + +CG ++ A R F ++M N G+ ++ F L C S + G +
Sbjct: 230 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGY-TSKGEFKKALKCISDMKLSGVK 288
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-----RKSLVTWNSIVSI 115
D A++ Y + G +E F +M + ++V+W ++++
Sbjct: 289 ------------PDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAG 336
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDY 174
++G+ + + +F ++V V + + +N L G +IHG IK D
Sbjct: 337 SEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDS 396
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA---------------- 218
+LLV NSLV+ Y +C + A + F ++ D+VSWN ++ A
Sbjct: 397 DLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMK 456
Query: 219 -------------------ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
+ + ALE + RM + PN TT + +C ++N
Sbjct: 457 FQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLK 516
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
LGK IH V++N +E VGSAL+ Y+ CD+LE A FSE+S +++V WN++I A
Sbjct: 517 LGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACA 576
Query: 320 -SKSSPTSIFLLIELLQLGYRPNEFTFSHVLR--SSLAF--QLLQLHCLIIRMGYENYEY 374
S S ++ LL E+ N T L S LA Q ++H IIR G + +
Sbjct: 577 QSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNF 636
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
+L SL+ +Y R G ++ ++ + +
Sbjct: 637 ILNSLID--------------------------------MYGRCGSIQKSRRIFDLMPQR 664
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
D+VSWN++I+ +G + + LF+ R + P++ TF +LLSACS + G
Sbjct: 665 DLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYF 724
Query: 495 GLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISA 547
++K + + + C ++D+ + G +++ +M + N W +L+ A
Sbjct: 725 KMMKTEYAMDPAVEQYAC--MVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 778
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 216/485 (44%), Gaps = 74/485 (15%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQ 62
NVVS+ ++I+ + GY +AL +F M+ G +P T +S C +L+ + G ++
Sbjct: 326 NVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 385
Query: 63 ASVLKNGLFCADAFVGTALLGLYGR-------------------------------HGCL 91
+K +D VG +L+ Y + G
Sbjct: 386 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSH 445
Query: 92 DEVVSVFEDMP----RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGV 147
+E + + +M ++TWN +V+ F ++G + + F + + ++ G
Sbjct: 446 EEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGA 505
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
+ ++L+ G++IHG V++N + V ++L++MY C + A +F ++ RDV
Sbjct: 506 LAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDV 565
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
V WN+II A A+S AL+L M++ V N T V + +C+ L GK IH
Sbjct: 566 VVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQF 625
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTS 326
+I+ L+ F+ ++L+D Y +C +++ + F + +++VSWN +I Y +
Sbjct: 626 IIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDA 685
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
+ L +G +PN TF++ L+++ + S
Sbjct: 686 VNLFQXFRTMGLKPNHITFTN-------------------------------LLSACSHS 714
Query: 387 GLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNI 441
GLI + + + A+ PA + + +R GQ+NET++ + ++ P+ W
Sbjct: 715 GLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGS 774
Query: 442 VIAAC 446
++ AC
Sbjct: 775 LLGAC 779
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 115/249 (46%), Gaps = 4/249 (1%)
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y +TG + ++ ++ ++ SW ++ GDY+E ++LF M + PD++
Sbjct: 133 VYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFV 192
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F + ACS+L N +G ++ + ++ V ++DM+ KCG + + + F E+
Sbjct: 193 FPKVFKACSELKNYRVGKDVYDYMLSIGF-EGNSCVKGSILDMFIKCGRMDIARRFFEEI 251
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++V W ++S G ++AL+ +M+ G KPD+V A+++ G E
Sbjct: 252 EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEAS 311
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF---PPNALIWRTFLEG 650
+ F M +P + + ++ + G+ EA + M PN++ + +
Sbjct: 312 KYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSA 371
Query: 651 CQRCRIAKY 659
C + ++
Sbjct: 372 CTNLSLLRH 380
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP R++VS+N +IS Y G+ DA+ +F G +P TF LLS C +E
Sbjct: 661 MPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEG 720
Query: 60 QLQASVLKNGLFCADAFVGTA-LLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIV 113
++K A A ++ L R G +E + E MP + W S++
Sbjct: 721 WKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLL 776
>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 800
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 185/638 (28%), Positives = 324/638 (50%), Gaps = 40/638 (6%)
Query: 19 CGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAF 76
CG +A+ ++ MI + + F F +L +C ++ G ++ ++K GL D
Sbjct: 80 CG---EAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLD-VDHV 135
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
V T+LLG+YG GCL VF++M + LV+W+SI+S + +G + + +F LV +
Sbjct: 136 VETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQD 195
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
V L + + + L + +HG +I+ + + ++LV MY +C SAE
Sbjct: 196 VELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAE 255
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
++F ++ R + SW +I S F +AL++++ M V PN T + V++SCAG
Sbjct: 256 RIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFN 315
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
GKS+H +K+ D +G AL+++YA+ L I +NI+SWN LI
Sbjct: 316 LLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLIS 375
Query: 317 GYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV 375
YAS+ ++ + +++ + G P+ F+ S + + LL L G++ + Y
Sbjct: 376 VYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWL-------GHQIHGYA 428
Query: 376 LGS-LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
+ ++ + ++ LI +Y++ G + + +++
Sbjct: 429 IKRHILDEFVQNSLID-----------------------MYSKCGHVDLAYLIFDRIQSK 465
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
+V+WN +I + G+ E + LF M + + TF++ + ACS + +L G LH
Sbjct: 466 SVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLH 525
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
+ + D F+ LIDMY KCG + + ++F+ M++R+V++W+A+I G++G
Sbjct: 526 HKLIAYGV-KKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDI 584
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHC 614
A+ F EM KP+ + + +L+AC H G V EG F M +++ VEP ++H+ C
Sbjct: 585 DAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEEGKFYFNSM-KNFEVEPNLEHFAC 643
Query: 615 VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+VDLL R G L EA +II +MPFP A IW L GC+
Sbjct: 644 MVDLLSRAGDLDEAYRIINSMPFPAEASIWGALLNGCR 681
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 163/608 (26%), Positives = 293/608 (48%), Gaps = 44/608 (7%)
Query: 49 SCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVT 108
SC SL P+ L + +L GL D T L+ Y + GCL VFE
Sbjct: 10 SCTSLRPL--TLLHSHLLVTGLH-HDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFM 66
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
W ++ F + + L+ +++ ++ +++ F V+ + +L+ GE++HG +I
Sbjct: 67 WAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRII 126
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
K G D + +V SL+ MY + +A+K+F ++ RD+VSW++II ++ + LE
Sbjct: 127 KYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLE 186
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
++ + V + T + + +C L L KS+H +I+ +E + ALV Y+
Sbjct: 187 MFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYS 246
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSH 347
+CD+ A FS + N++I SW A+I Y S+ ++ + +E+L+ PN T
Sbjct: 247 RCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMA 306
Query: 348 VLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
VL S F LL+ +HC ++ + + + +L+ YA+ G +S
Sbjct: 307 VLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLS------------- 353
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
Y E K+L + + +I+SWN++I+ A G +KE L +F M+
Sbjct: 354 -----------------YCE--KVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQ 394
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
PD+++ S +SAC+ + L LG +HG K I+ D FV N LIDMY KCG +
Sbjct: 395 RQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHIL--DEFVQNSLIDMYSKCGHV 452
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ IF+ + ++V+ W ++I G + A+ F +M + V + + AC
Sbjct: 453 DLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQAC 512
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
H G + +G L ++ +YGV+ ++ ++D+ + G L+ A ++ +M + +
Sbjct: 513 SHMGHLEKGKWLHHKL-IAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMS-ERSVVS 570
Query: 644 WRTFLEGC 651
W + GC
Sbjct: 571 WSAMIGGC 578
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 135/591 (22%), Positives = 264/591 (44%), Gaps = 49/591 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M R++VS++SIIS Y G + L MF ++++ E T + +C L + A
Sbjct: 160 MTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLA 219
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + + AL+ +Y R +F +M +S+ +W +++S + +
Sbjct: 220 KSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRS 279
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + + +F E++ +VA + + V+ + L G+ +H +K+ + +
Sbjct: 280 RWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLG 339
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+L+ Y Q + EK+ + R+++SWN +I A F +AL ++++M
Sbjct: 340 PALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQI 399
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ + I++CA + LG IH IK + D FV ++L+D Y+KC +++ A+L
Sbjct: 400 PDSFSLSSSISACANVGLLWLGHQIHGYAIKRHI-LDEFVQNSLIDMYSKCGHVDLAYLI 458
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLL 358
F I +K++V+WN++I G++ + L + + L NE TF +++ L
Sbjct: 459 FDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHL 518
Query: 359 Q----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+ LH +I G + ++ +L+ YAK G L I
Sbjct: 519 EKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCG----------DLRIAH----------- 557
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
++ + +VSW+ +I C +GD + LF M + P++ TF
Sbjct: 558 -----------RVFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITF 606
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+++LSACS + G +K E+ + + F C ++D+ + G + + +I N M
Sbjct: 607 MNILSACSHSGYVEEGKFYFNSMKNFEVEPNLEHFAC--MVDLLSRAGDLDEAYRIINSM 664
Query: 534 T-DRNVITWTALISALGLNGFAQRALEKFR--EMEFLGFKPDRVALIAVLT 581
W AL++ ++ QR ++ R E + L + D +L+
Sbjct: 665 PFPAEASIWGALLNGCRIH---QR-MDMIRNIERDLLDMRTDDTGYYTLLS 711
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 158/579 (27%), Positives = 307/579 (53%), Gaps = 43/579 (7%)
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
+YG+ G + + ++VF + + V+W IV+ F ++G + + + +V + +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
FV I S+ +DL+ G+ +H ++++ ++++++ +L+ MY +C + A K F ++
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRM---SVDIVFPNQTTFVYVINSCAGLQNSI 259
+ +V+WN +I + + + AL++Y M S + + P+ TF + +C+ + +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
G+ I A+ + + D V +AL++ Y+KC +LE A F + N+++++WN +I GYA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 320 SKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEY 374
+ + T L + + +PN TF +L + + L+ +H + GYE+ +
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYES-DL 299
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR-TGQYNETVKLLSQLER 433
V+G N++ +Y + + E ++ +L
Sbjct: 300 VIG-------------------------------NVLLNMYTKCSSSLEEARQVFERLRT 328
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
D+++WNI+I A G K+ L++FK M+ + P+ T ++LSAC+ L G ++
Sbjct: 329 RDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAV 388
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H LI +D + N L++MY +CGS+ +V +F + D+++++W+ LI+A +G
Sbjct: 389 HALIASGRC-KADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGH 447
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
++ LE F E+ G D V +++ L+AC HGG+++EG++ F M +G+ P+ H+
Sbjct: 448 SRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFL 507
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
C+VDLL R G L+ AE +I MPF P+A+ W + L GC+
Sbjct: 508 CMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCK 546
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 160/579 (27%), Positives = 284/579 (49%), Gaps = 53/579 (9%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEP--TQFTFGGLLSCDSLNPVEGAQLQ 62
N VS+ I++A++R G+ +AL + M+ G P F + S + +G L
Sbjct: 22 NSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLH 81
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
A +L+ L D +GTAL+ +Y R L+ F++M +K+LVTWN++++ + ++G
Sbjct: 82 AMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDH 141
Query: 123 EDCMFLFCELV-RSEVALTES--SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ ++ ++V +S + +F ++ S D+ G +I + +G+ + +V
Sbjct: 142 RGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQ 201
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L+NMY +C + SA K+F ++ RDV++WNT+I A+ +ALEL+ RM +
Sbjct: 202 NALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPK 261
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC-DNLEGAHL 298
PN TF+ ++ +C L++ G++IH KV ++ E D+ +G+ L++ Y KC +LE A
Sbjct: 262 PNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQ 321
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F + +++++WN LI+ Y + + +QL PNE T S+VL +
Sbjct: 322 VFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACA---- 377
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
VLG+ A LI+ VV N + +YNR
Sbjct: 378 -----------------VLGAKRQGKAVHALIASG-------RCKADVVLENSLMNMYNR 413
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G ++TV + + + +VSW+ +IAA A +G + LE F + + D+ T VS
Sbjct: 414 CGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVST 473
Query: 478 LSACSKLCNLALGSSL-------HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
LSACS L G HGL F+C ++D+ + G + ++ +
Sbjct: 474 LSACSHGGMLKEGVQSFLSMVGDHGLAPDYR-----HFLC--MVDLLSRAGRLEAAENLI 526
Query: 531 NEMT-DRNVITWTALISALGLNGFAQRA---LEKFREME 565
++M + + WT+L+S L+ +RA +K E+E
Sbjct: 527 HDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELE 565
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 253/495 (51%), Gaps = 53/495 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR---GFEPTQFTFG-GLLSCDSLNPV 56
M + +V++N++I+ YSR G AL+++ M+++ G +P TF L +C + +
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179
Query: 57 -EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
+G +++A + +G + +D+ V AL+ +Y + G L+ VF+ + + ++ WN+++S
Sbjct: 180 SQGREIEARTVASG-YASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISG 238
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ K G + LF + ++ +F+G++ +N +DLE G IH V ++G++ +
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESD 298
Query: 176 LLVANSLVNMYFQCAG-IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
L++ N L+NMY +C+ + A ++F+ + RDV++WN +I A + AL+++ +M
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQ 358
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
++ V PN+ T V+++CA L GK++HA + + DV + ++L++ Y +C +L+
Sbjct: 359 LENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLD 418
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
F+ I +K++VSW+ LI YA S T + ELLQ G ++ T L +
Sbjct: 419 DTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACS 478
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
H +++ G +++ ++G GL D F+ +++
Sbjct: 479 -------HGGMLKEGVQSFLSMVGD-------HGLAPDYRHFLCMVDL------------ 512
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY---- 468
+R G+ L+ + PD V+W +++ C + D K RAAR+
Sbjct: 513 -LSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTK---------RAARVADKLF 562
Query: 469 ----PDNYTFVSLLS 479
D ++ V+LLS
Sbjct: 563 ELESEDEHSTVTLLS 577
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 172/563 (30%), Positives = 281/563 (49%), Gaps = 41/563 (7%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF+++P+KS+ +W ++ ++GF D + F E++ ++ E + I
Sbjct: 120 VFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDS 179
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
+ GE +H VI GF V SL+ MY + I + K+F +E R+ VSWN +I
Sbjct: 180 IVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISG 239
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ + +A +LRM + + PN F+ V + L + G+ I+ + ++ +
Sbjct: 240 FVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSN 299
Query: 277 VFVGSALVDFYAKCDNLEGAHLCF-SEISNKNI-VSWNALILGYA-SKSSPTSIFLLIEL 333
+ VG+AL+D +AKC + + F S S + + WNA+I G+ S ++ L + +
Sbjct: 300 IHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRM 359
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
Q + + +T+ L S + L QLH +I KSG I
Sbjct: 360 CQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIW-------------------KSGSI 400
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
+L N + Y + G+ + KL E + +SW ++ A + +
Sbjct: 401 GVSLC--------------NALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQS 446
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
++++ L +F MR P+ TF +L++C+ LC+L G +H L KT + D V
Sbjct: 447 SEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGF-ARDKCV 505
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
++LIDMY KCGS+ ++K+F + D +VI+WTA+IS +G A+ ALE FR+ME +
Sbjct: 506 ESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLP 565
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
P+ + +L AC HGGLV EG+ F M YG+ PE++HY CVVD+L R G L EA
Sbjct: 566 NPNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAW 625
Query: 630 KIITTMPFPPNALIWRTFLEGCQ 652
K I MP P+ +W T L C+
Sbjct: 626 KFIMKMPIEPDEKVWSTLLGACR 648
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 152/628 (24%), Positives = 286/628 (45%), Gaps = 66/628 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNP-VEG 58
+P ++V S+ ++ + G+ D + F+ ++ P ++ + +C ++ V G
Sbjct: 124 IPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVG 183
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A V+ G F + FV T+LLG+Y + G + + VF + ++ V+WN+++S F
Sbjct: 184 EMVHAQVITRG-FSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVS 242
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + F ++ E+ + F+ V + D+E G I+ + + G + V
Sbjct: 243 NGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHV 302
Query: 179 ANSLVNMYFQCAGI---WSA-EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+L++M+ +C + WS F + + WN +I S + +A+ L+LRM
Sbjct: 303 GTALIDMFAKCGCVTESWSVFVSNFSGCGVN--LPWNAMISGFTISGHGEEAMLLFLRMC 360
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ + + T+ +NS A +++ K +H + K+ V + +AL+D YAKC L+
Sbjct: 361 QNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG-SIGVSLCNALMDAYAKCGELD 419
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
F N +SW L+ Y+ S ++ + ++ ++G++PN+ TFS VL S
Sbjct: 420 AMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCA 479
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ L Q+H L + G+ + V L+ YAK G + DA
Sbjct: 480 SLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDA----------------- 522
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+K+ L+ PD++SW +I+ A +G K+ LELF+ M P
Sbjct: 523 ---------------IKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNP 567
Query: 470 DNYTFVSLLSACSK-------LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
++ TF+ LL ACS L L +GL+ + E + C ++D+ G+ G
Sbjct: 568 NSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIE-----HYAC--VVDILGRVGR 620
Query: 523 IGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ + K +M + + W+ L+ A ++G Q L K + L + PD A + +L+
Sbjct: 621 LTEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQ--LAKIAAQKVLSYNPDDFAALVLLS 678
Query: 582 AC-RHGGLVREGMELFERMNRSYGVEPE 608
R G + G+ + M +S + E
Sbjct: 679 NTYREAGNIEGGLNV-RNMMKSQAMRKE 705
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/528 (24%), Positives = 249/528 (47%), Gaps = 45/528 (8%)
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA--NSLVNMYFQCAGIWSAEK 197
+E+S + +I ++E+ L+ + IHG VIK + L N LV Y +C+ SA +
Sbjct: 60 SETSLIELIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQ 119
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLR-MSVDIVFPNQTTFVYVINSCAGLQ 256
+F ++ + V SW ++ E+ + ++ ++ + DIV P++ I +C G+
Sbjct: 120 VFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIV-PDEYALSAAIQACIGVD 178
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ ++G+ +HA+VI FV ++L+ YAK + + F+ + N+N VSWNA+I
Sbjct: 179 SIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMIS 238
Query: 317 GYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYE----N 371
G+ S + + +L RPN F V ++ ++ I R+ +E +
Sbjct: 239 GFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQS 298
Query: 372 YEYVLGSLMTSYAKSGLISDALA-FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+V +L+ +AK G ++++ + FV+ + +P
Sbjct: 299 NIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLP----------------------- 335
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
WN +I+ +G +E + LF M I D YT+ S L++ + + +L
Sbjct: 336 --------WNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYV 387
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
LHG+I K+ I +CN L+D Y KCG + + K+F+ + N I+WT L++A
Sbjct: 388 KQLHGMIWKSGSIGVS--LCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQ 445
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
+ + AL F +M +GF+P++V VL +C + G ++ ++ G +
Sbjct: 446 SSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKT-GFARDKC 504
Query: 611 HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAK 658
++D+ + G +++A K+ ++ P+ + W + G + +AK
Sbjct: 505 VESVLIDMYAKCGSVRDAIKVFESLK-DPDVISWTAMISGYAQHGMAK 551
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 180/602 (29%), Positives = 302/602 (50%), Gaps = 43/602 (7%)
Query: 60 QLQASVLKNGLFCA--DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ A + GL + + ++L Y GC +F+++ SL +WN+++ ++
Sbjct: 39 QIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYT 98
Query: 118 KHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G D + LF +++ S ++ ++ VI + E G IH + +GFD +
Sbjct: 99 NSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDA 158
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V NSL+ MY C + A ++F + R +VSWNT+I ++ +AL ++ M
Sbjct: 159 FVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGK 218
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ P+ T V V+ C+ L+ +G+ +HA V L D+ V ++L+D YAKC N++ A
Sbjct: 219 GIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEA 278
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF 355
+ F E+ +++VSW ++ GY S LL +++Q +PN T + VL + +
Sbjct: 279 QMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASL 338
Query: 356 QLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L+ LH IR E+ V +L+ YAK +
Sbjct: 339 YSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNV---------------------- 376
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
N + ++ S+ + WN +I+ C HNG ++ +ELFK M + P++
Sbjct: 377 ----------NLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPND 426
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
T SLL A + L +L ++HG + ++ +S V +LID+Y KCGS+ S+ IFN
Sbjct: 427 ATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSR-IEVATILIDIYSKCGSLESAHNIFN 485
Query: 532 EM--TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
+ D+++ITW+A+I+ G++G + A+ F +M G KP+ + ++L AC H GLV
Sbjct: 486 GIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLV 545
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG+ LF+ M + DHY CV+DLL R G L+EA ++I TM F PN +W L
Sbjct: 546 DEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLG 605
Query: 650 GC 651
C
Sbjct: 606 SC 607
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 157/555 (28%), Positives = 274/555 (49%), Gaps = 46/555 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLLSC--DSLNPVEGAQL 61
++ S+N++I Y+ G DAL +F+ M+ G P +T+ ++ D L P GA +
Sbjct: 86 SLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALI 145
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A + +G F +DAFV +L+ +Y G ++ VF+ M ++LV+WN++++ + K+G
Sbjct: 146 HARTVMSG-FDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGC 204
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
V++ + +F ++ + ++ V V+ S ++LE G ++H LV ++ V NS
Sbjct: 205 VKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNS 264
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L++MY +C + A+ +F +++ RDVVSW T++ + + AL L M + V PN
Sbjct: 265 LLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPN 324
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
T V+++CA L + G+ +H I+ LE +V V +AL+D YAKC+N+ + FS
Sbjct: 325 FVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFS 384
Query: 302 EISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF----- 355
+ S + WNA+I G S +I L ++L PN+ T + +L + AF
Sbjct: 385 KTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLL-PAYAFLTDLQ 443
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
Q +H +IR G+ + V L+ Y+K G + A NI GI
Sbjct: 444 QARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESA---------------HNIFNGIP 488
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ DI++W+ +IA +G + + LF M + + P+ TF
Sbjct: 489 KKD---------------KDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFT 533
Query: 476 SLLSACSK--LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
S+L ACS L + LG L + +D + C +ID+ G+ G + + ++ M
Sbjct: 534 SILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTC--VIDLLGRAGRLEEAYELIRTM 591
Query: 534 TDR-NVITWTALISA 547
R N W AL+ +
Sbjct: 592 AFRPNHAVWGALLGS 606
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 197/358 (55%), Gaps = 10/358 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M +R +VS+N++I+ Y + G V++AL +F +MI +G EP T +L C L +E G
Sbjct: 184 MRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVG 243
Query: 59 AQLQASV-LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
++ A V +KN D V +LL +Y + G +DE +F +M ++ +V+W ++++ +
Sbjct: 244 RRVHALVEVKN--LGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYI 301
Query: 118 KHGFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+G + L C++++ E V + V+ ++ L+ G +HG I+ + E+
Sbjct: 302 LNGDARSAL-LLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEV 360
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+V +L++MY +C + + ++F + WN II + KA+EL+ +M ++
Sbjct: 361 IVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLME 420
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN T ++ + A L + +++H +I++ + V + L+D Y+KC +LE A
Sbjct: 421 AVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESA 480
Query: 297 HLCFSEI--SNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
H F+ I +K+I++W+A+I GY T+I L +++Q G +PNE TF+ +L +
Sbjct: 481 HNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHA 538
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/529 (23%), Positives = 237/529 (44%), Gaps = 43/529 (8%)
Query: 132 LVRSEVALTESS-FVGVIHGLSNEQDLEFGEQIHGLVIKNG-----FDYELLVANSLVNM 185
L +S+ LT ++ + ++ ++ + + +QIH I G + + LL + +
Sbjct: 8 LSKSKHLLTATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYA 67
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTT 244
F CA A K+F ++ + SWN +I S AL L+++M + +P+ T
Sbjct: 68 MFGCAP--HARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYT 125
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
+ +VI +C +G IHA+ + + + D FV ++L+ Y C +E A F +
Sbjct: 126 YPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMR 185
Query: 305 NKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLLQLHCL 363
+ +VSWN +I GY ++ + ++ G P+ T VL
Sbjct: 186 ERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLP------------- 232
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDAL-AFVTALNIPRAVVPANIIAGIYNRTGQYN 422
+ SY K + + A V N+ + N + +Y + G +
Sbjct: 233 ----------------VCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMD 276
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
E + ++++ D+VSW ++ NGD + L L + M+ + P+ T S+LSAC+
Sbjct: 277 EAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACA 336
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
L +L G LHG + + + S+ V LIDMY KC ++ S ++F++ + + W
Sbjct: 337 SLYSLKHGRCLHGWAIRQK-LESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWN 395
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
A+IS NG +++A+E F++M P+ L ++L A +++ + + RS
Sbjct: 396 AIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRS 455
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI-WRTFLEG 650
G ++ ++D+ + G L+ A I +P +I W + G
Sbjct: 456 -GFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAG 503
>gi|302793632|ref|XP_002978581.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
gi|300153930|gb|EFJ20567.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
Length = 785
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 178/660 (26%), Positives = 330/660 (50%), Gaps = 43/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP RNV+++ ++I A++ +E A ++F M GF+ T+ L+ +C +E G
Sbjct: 122 MPARNVITWTAMIGAHA-VTSLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVG 180
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L +++ + + AL+ +YGR G L++ ++F M + ++ WN++++ +G+
Sbjct: 181 IILHMRSVESS-SAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQ 239
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG VE+ + L+ +++ + +FV ++ + + L + +H ++++G + +
Sbjct: 240 HGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTEVKLVHSHIVESGVSINIAL 299
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LV MY +C + +F+ + R+V+SWN ++ A A+ KA+++ M +D V
Sbjct: 300 GTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGV 359
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T V ++N C G + LG+ +H + + E D+ + ++L++ Y +C +E A +
Sbjct: 360 KPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEM 419
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F I +N++SW A++ Y+ ++ LL + L G +P TF L + + +
Sbjct: 420 VFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEA 479
Query: 358 LQ----LHCLIIRMGYENYEYVLGS-LMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L +H ++ G + + LGS L+ Y + G I DA A +
Sbjct: 480 LDKGRLVHSCAVQSG-NDIDVSLGSALVAMYGRCGSIRDAKACFDDTEV----------- 527
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
R + V+W+ +IAA +G +E L+ ++M+ +
Sbjct: 528 --------------------RKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPA 567
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF S LSACS L +L G +H +++ + V N L+ MYGKCGS+ + ++F
Sbjct: 568 TFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFET 627
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
++ I W A+IS + + A+E F M+ G PD V + +L+ C HGGL+ EG
Sbjct: 628 SRRQDTICWNAIISGYAQHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVCSHGGLLDEG 687
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ + M G+EP D+Y CV+DLL R G L+EAE+ I ++ P + L C+
Sbjct: 688 VYAYASMVE-LGLEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLSSCK 746
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 146/628 (23%), Positives = 277/628 (44%), Gaps = 77/628 (12%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L +C + ++ A+ S + F+G L+ YG+ LD+ FE M K++
Sbjct: 2 LQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNV 61
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
TW +I+ + +H C L L+R
Sbjct: 62 YTWTAIIGVCAQH----HCHSLAIILLRQ------------------------------- 86
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
++ G + + + + MY C + A+++F + R+V++W +IGA A + + +A
Sbjct: 87 MLLEGVKPDNITLLAALTMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAVT-SLEQA 145
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
+++ M ++ N T+V ++ +C+ + +G +H + ++++ + + +AL+
Sbjct: 146 FKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITM 205
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL-LQLGYRPNEFTF 345
Y +C LE A FS + ++I++WNALI Y LL +L LQ G +P++ TF
Sbjct: 206 YGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTF 265
Query: 346 SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+L S G E V L+ S+ +S +A TAL
Sbjct: 266 VALLTMS--------------NGPEALTEV--KLVHSHIVESGVSINIALGTAL------ 303
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+Y++ +T L ++ + +++SWN+++ A A +G ++ +++ +YM+
Sbjct: 304 ------VAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLD 357
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ PDN T V LL+ C+ +L LG +HG I + +D + N L++MYG+CG +
Sbjct: 358 GVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGR-CEADLILWNSLLNMYGRCGEVEQ 416
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ +F+ + RNVI+WTA+++A AL F + G KP + + L AC
Sbjct: 417 AEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVG 476
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
+ +G L G + ++ +V + R G +++A+ N + W
Sbjct: 477 AEALDKG-RLVHSCAVQSGNDIDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWS 535
Query: 646 TFL----------EGCQRCRIAKYDTLN 663
+ EG Q R + L+
Sbjct: 536 AMIAAFVQHGQDREGLQHLRFMQQQGLD 563
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 140/604 (23%), Positives = 271/604 (44%), Gaps = 53/604 (8%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS------CDSLNPV 56
D V N +I Y +C ++DA F M + +T+ ++ C SL +
Sbjct: 27 DNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNV----YTWTAIIGVCAQHHCHSLAII 82
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
Q+ +K D A L +YG G +D+ VF+ MP ++++TW +++
Sbjct: 83 LLRQMLLEGVK-----PDNITLLAALTMYGSCGSVDDAKRVFDAMPARNVITWTAMI--- 134
Query: 117 GKHGF--VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
G H +E +F + ++V ++ S + LE G +H +++
Sbjct: 135 GAHAVTSLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAM 194
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
E + N+L+ MY +C + A +F + RD+++WN +I + + +A+ LY M
Sbjct: 195 ETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLML 254
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ P++ TFV ++ G + K +H+ ++++ + ++ +G+ALV Y+KC++LE
Sbjct: 255 QEGCKPDKVTFVALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLE 314
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSL 353
F ++ +N++SWN ++ YA + E +QL G +P+ T +L
Sbjct: 315 DTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCT 374
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L+L G + + ++ A+ +D + + + LN
Sbjct: 375 GSADLKL-------GRKVHGWI--------AEGRCEADLILWNSLLN------------- 406
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y R G+ + + + + +++SW ++ A + L LF + + + P T
Sbjct: 407 MYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCIT 466
Query: 474 FVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
F+ L AC L G +H ++ I D + + L+ MYG+CGSI + F++
Sbjct: 467 FLEALDACVGAEALDKGRLVHSCAVQSGNDI--DVSLGSALVAMYGRCGSIRDAKACFDD 524
Query: 533 MTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
R N +TW+A+I+A +G + L+ R M+ G + L+AC + +RE
Sbjct: 525 TEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLRE 584
Query: 592 GMEL 595
G +
Sbjct: 585 GKRI 588
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 156/336 (46%), Gaps = 68/336 (20%)
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
++ +C ++ + + +H+++++ +L+ VF+G+ L+ Y KC +L+ A F +S KN
Sbjct: 1 LLQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKN 60
Query: 308 IVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIR 366
+ +W A+I A + +I LL ++L G +P+ T
Sbjct: 61 VYTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNIT---------------------- 98
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
L + +T Y G + DA A+ PA
Sbjct: 99 ---------LLAALTMYGSCGSVDDAKRVFDAM-------PAR----------------- 125
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
++++W +I A A ++ ++F+ M + T+V+L+ ACSK
Sbjct: 126 --------NVITWTAMIGAHAVTS-LEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEF 176
Query: 487 LALGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
L +G LH ++ E S+ +T +CN LI MYG+CG + + IF+ M +R++I W ALI
Sbjct: 177 LEVGIILH--MRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALI 234
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ G +G + A+ ++ M G KPD+V +A+LT
Sbjct: 235 TEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLT 270
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 12/181 (6%)
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LL AC K+ L + LH I + + + F+ N LI YGKC S+ + + F M+ +
Sbjct: 1 LLQACPKVKALDVARRLHSQIVRASL-DNRVFLGNHLIHTYGKCHSLDDAWETFERMSYK 59
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
NV TWTA+I + A+ R+M G KPD + L+A LT G V + +F
Sbjct: 60 NVYTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAALTMYGSCGSVDDAKRVF 119
Query: 597 ERM-NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP---FPPNALIWRTFLEGCQ 652
+ M R+ M H V L++A K+ M F N + + T ++ C
Sbjct: 120 DAMPARNVITWTAMIGAHAVTS-------LEQAFKVFRLMELEGFKSNFVTYVTLVQACS 172
Query: 653 R 653
+
Sbjct: 173 K 173
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 193/681 (28%), Positives = 336/681 (49%), Gaps = 35/681 (5%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEG--AQ 60
RN+VS+ SIIS ++ G +AL +F M G +P + TF ++ +C VE A
Sbjct: 676 RNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQGLAF 735
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVT-WNSIVSIFGKH 119
++ V + + G ++ + GR G L E + E +P + VT W ++ K+
Sbjct: 736 FKSMVYEYNIDPEIKHFG-CIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGCCSKY 794
Query: 120 GFV---EDCMFLFCELVR---------SEVALTESSFVGVIHGLS----------NEQDL 157
G V E + + +L R S V F E +
Sbjct: 795 GEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVKLQEAVM 854
Query: 158 EFGEQIHGLVIKNGFDYELLVANSLVNMY-FQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
E +++H ++ +G + ++ +Y + + SA K+FK +E WNT++
Sbjct: 855 EAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTTFLWNTLLRG 914
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
LA+S+ A+ Y + + P+ TF +V+ +CA G+ +H VIK D
Sbjct: 915 LAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLGFLLD 974
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
+FV ++L+ YA C L A F+E+ K++VSWN+LI GY+ + + L +L+Q
Sbjct: 975 IFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQA 1034
Query: 337 G-YRPNEFTFSHVLRSSLAFQLLQL-HCLIIRMGYENYE---YVLGSLMTSYAKSGLISD 391
+ ++ T V+ + + C++ + + + E Y+ +L+ Y + G +
Sbjct: 1035 EEVQADKVTMVKVISACTHLGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQS 1094
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
A + + + V N + Y + G K+ Q+ D++SW+ +I A +
Sbjct: 1095 AEKVFSQMK-DKNTVTLNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASH 1153
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+ + LELF+ M+ A++ PD S+LSAC+ L L LG +H +++ I +DT + N
Sbjct: 1154 FSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNI-KADTIMEN 1212
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
LIDM+ KCG + ++++F +M +++ ++W ++I L NGF AL+ F M G +P
Sbjct: 1213 SLIDMFAKCGCVQEALQVFTDMEEKDTLSWNSIILGLANNGFEDEALDIFHSMLTEGPRP 1272
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ V + VL AC + LV EG++ FERM + +EP+M HY CVVD+L R G L++A
Sbjct: 1273 NEVTFLGVLIACANRQLVEEGLDHFERMKSVHNLEPQMKHYGCVVDILSRAGQLEKAVSF 1332
Query: 632 ITTMPFPPNALIWRTFLEGCQ 652
I+ MP P+ ++WR L C+
Sbjct: 1333 ISEMPLAPDPVVWRILLGACR 1353
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 185/728 (25%), Positives = 324/728 (44%), Gaps = 128/728 (17%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFT----------FGGLLSC 50
MP RNVVS+ +I Y+R +AL + +M+ G P++ T GG+L
Sbjct: 571 MPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLAVIPAISNLGGILM- 629
Query: 51 DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM-PRKSLVTW 109
G L K G+ +DA VG +L+ LY + G + + VF++M R++LV+W
Sbjct: 630 -------GEMLNGYCEKKGIM-SDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSW 681
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI----HGLSNEQDLEFGEQIHG 165
SI+S F HG + + LF E+ R+ + +F+ VI HG EQ L F
Sbjct: 682 TSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQGLAF---FKS 738
Query: 166 LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFG 224
+V + D E+ +++M + + AE++ + + + +V W ++G ++ +G
Sbjct: 739 MVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGCCSK---YG 795
Query: 225 KAL--ELYLRMSVDIVFPNQTTFVYVIN---------------------SCAGLQNSILG 261
+ E ++M D+ + F + N LQ +++
Sbjct: 796 EVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVKLQEAVME 855
Query: 262 --KSIHAKVIKNALECDVFVGSALVDFYA-KCDNLEGAHLCFSEISNKNIVSWNALILGY 318
K +HA ++ + L + S ++ YA +L AH F +I + WN L+ G
Sbjct: 856 AVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTTFLWNTLLRGL 915
Query: 319 ASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYE 373
A +P + + Q G +P+ TF VL++ + Q+H +I++G+
Sbjct: 916 AQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLGFLLDI 975
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
+V SL+ YA G AL R+V +NE +
Sbjct: 976 FVSNSLIYLYAACG----------ALACARSV---------------FNEMLV------- 1003
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
D+VSWN +I + + KEVL LFK M+A + D T V ++SAC+ L + ++ +
Sbjct: 1004 KDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMADCM 1063
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG- 552
I+ I D ++ N LID Y + G + S+ K+F++M D+N +T A+I+A G
Sbjct: 1064 VRYIEHNH-IEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMITAYAKGGN 1122
Query: 553 -------FAQ-----------------------RALEKFREMEFLGFKPDRVALIAVLTA 582
F Q +LE FR+M+ KPD V + +VL+A
Sbjct: 1123 LVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSA 1182
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H G + G + + + R+ ++ + + ++D+ + G ++EA ++ T M + L
Sbjct: 1183 CAHLGALDLGKWIHDYVRRN-NIKADTIMENSLIDMFAKCGCVQEALQVFTDME-EKDTL 1240
Query: 643 IWRTFLEG 650
W + + G
Sbjct: 1241 SWNSIILG 1248
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 191/357 (53%), Gaps = 7/357 (1%)
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL---- 357
++ +++ W A + Y+ P L + + + F F+ VL++
Sbjct: 439 KVFDQSPAPWRAFLKAYSHGPFPLEALHLFKHARQHLADDTFVFTFVLKACAGLGWHRAG 498
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
QLH L+++ G+E + YV +L+ Y S + +A + + + VV N++ +
Sbjct: 499 AQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPV-KNVVSWNVMITGFAG 557
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G+ L Q+ ++VSW +I Y E L L ++M A I P T +++
Sbjct: 558 WGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLAV 617
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR- 536
+ A S L + +G L+G +K I+S D V N LID+Y K GS+ +S+K+F+EM DR
Sbjct: 618 IPAISNLGGILMGEMLNGYCEKKGIMS-DARVGNSLIDLYAKIGSVQNSLKVFDEMLDRR 676
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
N+++WT++IS ++G + ALE F EM G KP+R+ ++V+ AC HGGLV +G+ F
Sbjct: 677 NLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQGLAFF 736
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ M Y ++PE+ H+ C++D+L R G L EAE+II +P N +WR L C +
Sbjct: 737 KSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGCCSK 793
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 168/702 (23%), Positives = 305/702 (43%), Gaps = 110/702 (15%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPT-QFTFGGLLSCDSLN-PVEGAQ 60
D++ + + + AYS + +AL +F + + T FTF L +C L GAQ
Sbjct: 442 DQSPAPWRAFLKAYSHGPFPLEALHLFKHARQHLADDTFVFTFV-LKACAGLGWHRAGAQ 500
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK---------------- 104
L A V++ G F A+V TAL+ +Y CL E VF++MP K
Sbjct: 501 LHALVVQKG-FEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNVMITGFAGWG 559
Query: 105 ---------------SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH 149
++V+W ++ + + + + L ++ ++ +E + + VI
Sbjct: 560 EVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLAVIP 619
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVV 208
+SN + GE ++G K G + V NSL+++Y + + ++ K+F ++ + R++V
Sbjct: 620 AISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLV 679
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA--GLQNSILG--KSI 264
SW +II A +ALEL+ M + PN+ TF+ VIN+C+ GL L KS+
Sbjct: 680 SWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQGLAFFKSM 739
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNL-EGAHLCFSEISNKNIVSWNALILGYASKSS 323
V + ++ ++ ++D + L E + N+ W ++LG SK
Sbjct: 740 ---VYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWR-ILLGCCSKYG 795
Query: 324 PTSI----FLLIELLQLGYRPNEFTFSHVL----RSSLAFQ------------------- 356
++ +I L+ + S+VL R S A Q
Sbjct: 796 EVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVKLQEAVME 855
Query: 357 -LLQLHCLIIRMGYENYEYVLGSLMTSYA--KSGLISDALAFVTALNIPRAVVPANIIAG 413
+ +LH ++ G N +Y + ++ YA +S L+S
Sbjct: 856 AVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVS----------------------- 892
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
K+ Q+E P WN ++ A + K+ + +K + + PDN T
Sbjct: 893 ----------AHKVFKQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLT 942
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F +L AC+K C G +H + K + D FV N LI +Y CG++ + +FNEM
Sbjct: 943 FPFVLKACAKTCAPKEGEQMHNHVIKLGFL-LDIFVSNSLIYLYAACGALACARSVFNEM 1001
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++V++W +LI + + L F+ M+ + D+V ++ V++AC H G
Sbjct: 1002 LVKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMAD 1061
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+ + ++ +E ++ + ++D R G L+ AEK+ + M
Sbjct: 1062 CMVRYIEHNH-IEVDVYLGNTLIDYYCRIGQLQSAEKVFSQM 1102
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 118/549 (21%), Positives = 231/549 (42%), Gaps = 70/549 (12%)
Query: 94 VVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
+ VF+ P W + + + F + + LF + R +A F V+ +
Sbjct: 437 ALKVFDQSP----APWRAFLKAYSHGPFPLEALHLF-KHARQHLADDTFVFTFVLKACAG 491
Query: 154 EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTI 213
G Q+H LV++ GF++ V +L+N+Y + A K+F ++ +++VVSWN +
Sbjct: 492 LGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNVM 551
Query: 214 IGALA---ESEN----------------------------FGKALELYLRMSVDIVFPNQ 242
I A E E + +AL L M + P++
Sbjct: 552 ITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSE 611
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T + VI + + L ++G+ ++ K + D VG++L+D YAK +++ + F E
Sbjct: 612 ITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDE 671
Query: 303 -ISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
+ +N+VSW ++I G+A S ++ L E+ + G +PN TF V+ + L++
Sbjct: 672 MLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQ 731
Query: 361 HCLIIRMGYENYEYVL-------GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ YEY + G ++ ++G + +A + L + V I+ G
Sbjct: 732 GLAFFKSMV--YEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLG 789
Query: 414 IYNRTGQY---NETVKLLSQLERP---DIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
++ G+ +K++S LER D + V+ D ++ +L + ++
Sbjct: 790 CCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVKL 849
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS-IGSS 526
+++ A KL + S LH + + +I +Y S + S+
Sbjct: 850 QE------AVMEAVKKLHAHLVVSGLHNC----------QYAMSKVIRLYALHQSDLVSA 893
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
K+F ++ W L+ L + + A+ +++ + G KPD + VL AC
Sbjct: 894 HKVFKQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKT 953
Query: 587 GLVREGMEL 595
+EG ++
Sbjct: 954 CAPKEGEQM 962
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 111/220 (50%), Gaps = 5/220 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+P+++++S++S+I AYS+ + D+L +F M +P +LS C L ++ G
Sbjct: 1133 IPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLG 1192
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V +N + AD + +L+ ++ + GC+ E + VF DM K ++WNSI+
Sbjct: 1193 KWIHDYVRRNNIK-ADTIMENSLIDMFAKCGCVQEALQVFTDMEEKDTLSWNSIILGLAN 1251
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG-EQIHGLVIKNGFDYELL 177
+GF ++ + +F ++ E +F+GV+ +N Q +E G + + + + ++
Sbjct: 1252 NGFEDEALDIFHSMLTEGPRPNEVTFLGVLIACANRQLVEEGLDHFERMKSVHNLEPQMK 1311
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEI-RDVVSWNTIIGA 216
+V++ + + A ++ + D V W ++GA
Sbjct: 1312 HYGCVVDILSRAGQLEKAVSFISEMPLAPDPVVWRILLGA 1351
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEGA 59
M +++ +S+NSII + G+ ++AL +F M+ G P + TF G L++C + VE
Sbjct: 1234 MEEKDTLSWNSIILGLANNGFEDEALDIFHSMLTEGPRPNEVTFLGVLIACANRQLVEEG 1293
Query: 60 QLQASVLK--NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIF 116
+K + L G ++ + R G L++ VS +MP V W ++
Sbjct: 1294 LDHFERMKSVHNLEPQMKHYG-CVVDILSRAGQLEKAVSFISEMPLAPDPVVWRILLGAC 1352
Query: 117 GKHGFV 122
HG V
Sbjct: 1353 RTHGNV 1358
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 170/564 (30%), Positives = 284/564 (50%), Gaps = 43/564 (7%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F+++P S++ WN I+ + +G + + L+ ++ V + ++ V+ S
Sbjct: 65 LFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLA 124
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
+E G +IH G + ++ V +LV+ Y +C + A+++F + RDVV+WN +I
Sbjct: 125 IEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAG 184
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ A++L ++M + + PN +T V V+ + + GK++H ++ + +
Sbjct: 185 CSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNG 244
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE--LL 334
V VG+ L+D YAKC L A F + +N VSW+A+I GY L + +L
Sbjct: 245 VVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMIL 304
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLG-SLMTSYAKSGLI 389
+ P T VLR+ L +LHC II++G + +LG +L++ YAK G+I
Sbjct: 305 KDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXV-LDILLGNTLLSMYAKCGVI 363
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
DA ++ + D VS++ +++ C N
Sbjct: 364 DDA--------------------------------IRFFDXMNPKDSVSFSAIVSGCVQN 391
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTF 508
G+ L +F+ M+ + I PD T + +L ACS L L G HG LI + ++DT
Sbjct: 392 GNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRG--FATDTL 449
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+CN LIDMY KCG I + ++FN M ++++W A+I G++G AL F ++ LG
Sbjct: 450 ICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG 509
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
KPD + I +L++C H GLV EG F+ M+R + + P M+H C+VD+L R G + EA
Sbjct: 510 LKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEA 569
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
I MPF P+ IW L C+
Sbjct: 570 HHFIRNMPFEPDVRIWSALLSACR 593
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 151/573 (26%), Positives = 284/573 (49%), Gaps = 34/573 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P+ +V+ +N II AY+ G + A+ ++ M++ G P ++T+ +L +C L +E G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ + GL +D FV TAL+ Y + G L E +F M + +V WN++++
Sbjct: 129 VEIHSHAKMFGLE-SDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSL 187
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G +D + L ++ + S+ VGV+ + + L G+ +HG ++ FD ++V
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVV 247
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV-DI 237
L++MY +C + A K+F + +R+ VSW+ +IG S+ +ALEL+ +M + D
Sbjct: 248 GTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDA 307
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P T V+ +CA L + G+ +H +IK D+ +G+ L+ YAKC ++ A
Sbjct: 308 MDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAI 367
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F ++ K+ VS++A++ G + + ++QL G P+ T VL +
Sbjct: 368 RFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLA 427
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
LQ G+ ++ Y+ ++ +A LI +AL +Y+
Sbjct: 428 ALQ-------HGFCSHGYL---IVRGFATDTLICNAL------------------IDMYS 459
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G+ + ++ ++++R DIVSWN +I +G E L LF + A + PD+ TF+
Sbjct: 460 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 519
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-D 535
LLS+CS + G + + I C ++D+ G+ G I + M +
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 579
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+V W+AL+SA ++ + E ++++ LG
Sbjct: 580 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLG 612
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 140/466 (30%), Positives = 225/466 (48%), Gaps = 42/466 (9%)
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
+R EV +++++ ++ + L ++IH +KN + + V + L +Y C +
Sbjct: 3 LRXEV---KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQV 59
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
A ++F ++ V+ WN II A A + F A++LY M V PN+ T+ +V+ +C
Sbjct: 60 VLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKAC 119
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
+GL G IH+ LE DVFV +ALVDFYAKC L A FS +S++++V+WN
Sbjct: 120 SGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWN 179
Query: 313 ALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRM 367
A+I G + ++ L++++ + G PN T VL + + L LH +R
Sbjct: 180 AMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRR 239
Query: 368 GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
++N V L+ YAK + A I++ G NE
Sbjct: 240 SFDNGVVVGTGLLDMYAKCQCLLYA-------------------RKIFDVMGVRNE---- 276
Query: 428 LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCN 486
VSW+ +I + KE LELF M + P T S+L AC+KL +
Sbjct: 277 ---------VSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTD 327
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L+ G LH I K + D + N L+ MY KCG I +++ F+ M ++ ++++A++S
Sbjct: 328 LSRGRKLHCYIIKLGXV-LDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVS 386
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
NG A AL FR M+ G PD ++ VL AC H ++ G
Sbjct: 387 GCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHG 432
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 5/180 (2%)
Query: 473 TFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
++ LL AC + +L +H +K T ++D+ V + L +Y C + + ++F+
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTS--NADSSVLHKLTRLYLSCNQVVLARRLFD 67
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
E+ + +VI W +I A NG A++ + M LG +P++ VL AC + +
Sbjct: 68 EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G+E+ + +G+E ++ +VD + G L EA+++ ++M + + W + GC
Sbjct: 128 GVEIHSHA-KMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGC 185
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 181/649 (27%), Positives = 326/649 (50%), Gaps = 38/649 (5%)
Query: 8 SFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASV 65
S N+ I+ +S G L + M+ +TF LL +C LN G L +
Sbjct: 28 SVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRI 87
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
L +GL DA++ ++L+ Y + G D VF+ MP +++V W +I+ + + G V +
Sbjct: 88 LVSGL-SLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEA 146
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
LF E+ R + + + + ++ G+S +L + +HG I GF ++ ++NS++N+
Sbjct: 147 FSLFDEMRRQGIQPSSVTVLSLLFGVS---ELAHVQCLHGCAILYGFMSDINLSNSMLNV 203
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C I + K+F ++ RD+VSWN++I A A+ N + L L M + TF
Sbjct: 204 YGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTF 263
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
V++ A LG+ +H ++++ D V ++L+ Y K ++ A F S+
Sbjct: 264 GSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSD 323
Query: 306 KNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
K++V W A+I G S+ ++ + ++L+ G +P+ T + V+ +
Sbjct: 324 KDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITAC------------ 371
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
++G Y LG+ + L ++ +P V N + +Y + G +++
Sbjct: 372 AQLG----SYNLGTSI------------LGYILRQELPLDVATQNSLVTMYAKCGHLDQS 415
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+ + R D+VSWN ++ A NG E L LF MR+ PD+ T VSLL C+
Sbjct: 416 SIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCAST 475
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
L LG +H + + + V L+DMY KCG + ++ + FN+M ++++W+A+
Sbjct: 476 GQLHLGKWIHSFVIRNGLRPC-ILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAI 534
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I G +G + AL + + G KP+ V ++VL++C H GLV +G+ ++E M + +G
Sbjct: 535 IVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFG 594
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL-IWRTFLEGCQ 652
+ P+++H+ CVVDLL R G ++EA + FP L + L+ C+
Sbjct: 595 IAPDLEHHACVVDLLSRAGRVEEAYNVYKK-KFPDPVLDVLGIILDACR 642
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 253/538 (47%), Gaps = 41/538 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP+RNVV + +II YSR G V +A +F M +G +P+ T LL L V+
Sbjct: 122 MPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQC- 180
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
L + G F +D + ++L +YG+ G ++ +F+ M + LV+WNS++S + +
Sbjct: 181 -LHGCAILYG-FMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQI 238
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + + + L + +F V+ ++ +L+ G +HG +++ GF + V
Sbjct: 239 GNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVE 298
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
SL+ +Y + I A +MF+ +DVV W +I L ++ + KAL ++ +M V
Sbjct: 299 TSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVK 358
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ T VI +CA L + LG SI +++ L DV ++LV YAKC +L+ + +
Sbjct: 359 PSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIV 418
Query: 300 FSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F ++ +++VSWNA++ GYA ++FL E+ P+ T +L+ + L
Sbjct: 419 FDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQL 478
Query: 359 QL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
L H +IR G V SL+ Y K G + A
Sbjct: 479 HLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTA---------------------- 516
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+ +Q+ D+VSW+ +I ++G + L + + + P++ F
Sbjct: 517 ----------QRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIF 566
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+S+LS+CS + G +++ + K I+ D ++D+ + G + + ++ +
Sbjct: 567 LSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKK 624
>gi|302775226|ref|XP_002971030.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
gi|300161012|gb|EFJ27628.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
Length = 846
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 181/664 (27%), Positives = 331/664 (49%), Gaps = 49/664 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-GAQ 60
D +++++ ++++AY++ G+ +AL +F M +G EP +F F + +C S+ +E G
Sbjct: 169 DPDLIAWTAMMTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTV 228
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L + +L + + C D VG ALL Y + G + E S+F M K++VTW++IV+ + ++G
Sbjct: 229 LHSRLLASSVEC-DGVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNG 287
Query: 121 FVEDCMFLFCELVRSEVALTESS--FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
E + LF E++ +A + + + ++ L+ ++H +V
Sbjct: 288 HHEPAVELFREMLLDGIAPNKVTIALLRIVEACDQPDALDQARELHTRFFPGAAAAGDVV 347
Query: 179 ANS-LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ LVNMY +C + A+ +F +++ R++ SWN ++ + ++ +AL + M ++
Sbjct: 348 VATALVNMYGRCGSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEG 407
Query: 238 --VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN--ALECDVFVGSALVDFYAKCDNL 293
V P+ TFV ++C + + IH+++ ++ + + DV +GSAL+ Y C +L
Sbjct: 408 EGVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRSL 467
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSS 352
GA E+ N++SW ++IL + + +QL G++P+ T V++++
Sbjct: 468 AGAAQVLDEMPRTNVISWTSMILACEQNEDNEAAIHVYRAMQLHGHKPDPVTMVTVIKAA 527
Query: 353 LAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
L + H G+ V +L+T Y SG + A
Sbjct: 528 ANLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQAA---------------- 571
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
K L Q D+V+WN +++A NG + L F+ M +
Sbjct: 572 -------------ENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQALRTFQRMLHHGRH 618
Query: 469 PDNYTFVSLLSACS-KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD TFV++L+AC+ L +H L + SDT V N L+ MY +CG++ +
Sbjct: 619 PDKTTFVNILNACAGDPSKLLQAVKIHALAAACGL-DSDTDVANTLLHMYSRCGNLSRAR 677
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
K+F+ +T +NV++W+A+ +A NG A AL+ FR M G +P+ V I++L+ C H G
Sbjct: 678 KVFHAITQKNVVSWSAMAAACAHNGDADGALQAFRGMLHGGIQPNAVTFISILSGCSHTG 737
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
L+ E + M+ + ++P + HY C++DLL R G AE++ T +P P + W +
Sbjct: 738 LMDEAVSYLYAMSSDHNLKPTVQHYACLLDLLARAGKFHRAEELATHLPNP---VAWNSL 794
Query: 648 LEGC 651
L C
Sbjct: 795 LGAC 798
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 150/668 (22%), Positives = 304/668 (45%), Gaps = 48/668 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV---EGA 59
+NV ++ +I A++ G +A+ +F M G + +FTF +L +C +L G
Sbjct: 59 KNVFTWTILIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGK 118
Query: 60 QLQASVLKNGLFCAD---AFVGTALLGLYGRHGCLDEVVSVFEDMPRK----SLVTWNSI 112
+ + + + GL TA++ Y ++G +++ +FE M + L+ W ++
Sbjct: 119 TIHSRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQGLDPDLIAWTAM 178
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
++ + + G + + LF ++ + +FV I S+ LE G +H ++ +
Sbjct: 179 MTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSV 238
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ + +V N+L+N Y + + + +F +++++VV+W+ I+ A A++ + A+EL+
Sbjct: 239 ECDGVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFRE 298
Query: 233 MSVDIVFPNQTT--FVYVINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAK 289
M +D + PN+ T + ++ +C + +H + A DV V +ALV+ Y +
Sbjct: 299 MLLDGIAPNKVTIALLRIVEACDQPDALDQARELHTRFFPGAAAAGDVVVATALVNMYGR 358
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYA--SKSSPTSIFLLIELLQ-LGYRPNEFTFS 346
C ++ A F E+ ++NI SWNA+++ Y+ +S F LL+ G +P+ TF
Sbjct: 359 CGSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITF- 417
Query: 347 HVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+ + ++G L + IS + + VV
Sbjct: 418 --------------------VSAADACGMMGDLSRAVEIHSRISQSWP-----SNQTDVV 452
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
+ + +Y ++L ++ R +++SW +I AC N D + + +++ M+
Sbjct: 453 LGSALIKMYGNCRSLAGAAQVLDEMPRTNVISWTSMILACEQNEDNEAAIHVYRAMQLHG 512
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
PD T V+++ A + L +L G H +S T V N L+ +YG G + ++
Sbjct: 513 HKPDPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATS-TVVGNALVTLYGTSGDLQAA 571
Query: 527 VKIFNEMTDR---NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+F E+ + +V+TW +++SA NG +AL F+ M G PD+ + +L AC
Sbjct: 572 ENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQALRTFQRMLHHGRHPDKTTFVNILNAC 631
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
+ + G++ + D + ++ + R G+L A K+ + N +
Sbjct: 632 AGDPSKLLQAVKIHALAAACGLDSDTDVANTLLHMYSRCGNLSRARKVFHAIT-QKNVVS 690
Query: 644 WRTFLEGC 651
W C
Sbjct: 691 WSAMAAAC 698
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 147/605 (24%), Positives = 284/605 (46%), Gaps = 55/605 (9%)
Query: 48 LSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV 107
L D+ N G + ++ +G + D ++ L+ +YGR + + ++VF + RK++
Sbjct: 4 LHGDAKNLDAGRAVHLQMITSG-YHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVF 62
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN--EQDLEFGEQIHG 165
TW ++ +G + + LF E+ V E +F ++ SN L G+ IH
Sbjct: 63 TWTILIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHS 122
Query: 166 LVIKNGF----DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR----DVVSWNTIIGAL 217
+ + G + ++ + ++++ Y Q I A ++F+ ++++ D+++W ++ A
Sbjct: 123 RIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQGLDPDLIAWTAMMTAY 182
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
+ + +AL L+ +M + + P++ FV I++C+ + + G +H++++ +++ECD
Sbjct: 183 NQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECDG 242
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQL 336
VG+AL++FYAK + + FS + KN+V+W+A++ YA ++ L E+L
Sbjct: 243 VVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLD 302
Query: 337 GYRPNEFTFSHVLRSSLAF-------QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
G PN+ T + +LR A Q +LH
Sbjct: 303 GIAPNKVTIA-LLRIVEACDQPDALDQARELHT--------------------------- 334
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
F VV A + +Y R G ++ + +++ +I SWN ++ + N
Sbjct: 335 ----RFFPGAAAAGDVVVATALVNMYGRCGSVSDAKTVFDEMQHRNITSWNAMLVTYSLN 390
Query: 450 GDYKEVLELFKYM--RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT-EIISSD 506
E L F+ M + PD TFVS AC + +L+ +H I ++ +D
Sbjct: 391 QRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSNQTD 450
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
+ + LI MYG C S+ + ++ +EM NVI+WT++I A N + A+ +R M+
Sbjct: 451 VVLGSALIKMYGNCRSLAGAAQVLDEMPRTNVISWTSMILACEQNEDNEAAIHVYRAMQL 510
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
G KPD V ++ V+ A + ++ G+E F ++G + +V L G L+
Sbjct: 511 HGHKPDPVTMVTVIKAAANLHDLKRGIE-FHAQAAAFGFATSTVVGNALVTLYGTSGDLQ 569
Query: 627 EAEKI 631
AE +
Sbjct: 570 AAENV 574
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 142/576 (24%), Positives = 265/576 (46%), Gaps = 65/576 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL---SCDSLNPVE 57
M +NVV++++I++AY++ G+ E A+ +F M+ G P + T L +CD + ++
Sbjct: 268 MKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLLDGIAPNKVTIALLRIVEACDQPDALD 327
Query: 58 GA-QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
A +L D V TAL+ +YGR G + + +VF++M +++ +WN+++ +
Sbjct: 328 QARELHTRFFPGAAAAGDVVVATALVNMYGRCGSVSDAKTVFDEMQHRNITSWNAMLVTY 387
Query: 117 G-KHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKN--GF 172
+E F L+ E ++ +FV DL +IH + ++
Sbjct: 388 SLNQRSLEALRFFRTMLLEGEGVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSN 447
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
++++ ++L+ MY C + A ++ ++ +V+SW ++I A ++E+ A+ +Y
Sbjct: 448 QTDVVLGSALIKMYGNCRSLAGAAQVLDEMPRTNVISWTSMILACEQNEDNEAAIHVYRA 507
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M + P+ T V VI + A L + G HA+ VG+ALV Y +
Sbjct: 508 MQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSGD 567
Query: 293 LEGAHLCFSEI---SNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHV 348
L+ A F E+ S +++V+WN+++ + P + +L G P++ TF ++
Sbjct: 568 LQAAENVFKELLQQSVEDVVTWNSMLSAWNQNGLPNQALRTFQRMLHHGRHPDKTTFVNI 627
Query: 349 LRS-----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
L + S Q +++H L A GL SD
Sbjct: 628 LNACAGDPSKLLQAVKIHALA-------------------AACGLDSDTDV--------- 659
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
AN + +Y+R G + K+ + + ++VSW+ + AACAHNGD L+ F+ M
Sbjct: 660 ----ANTLLHMYSRCGNLSRARKVFHAITQKNVVSWSAMAAACAHNGDADGALQAFRGML 715
Query: 464 AARIYPDNYTFVSLLSACSK--LCNLALG-----SSLHGLIKKTEIISSDTFVCNMLIDM 516
I P+ TF+S+LS CS L + A+ SS H L + + C L+D+
Sbjct: 716 HGGIQPNAVTFISILSGCSHTGLMDEAVSYLYAMSSDHNLKPTVQ-----HYAC--LLDL 768
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+ G + ++ + N + W +L+ A ++G
Sbjct: 769 LARAGKFHRAEELATHLP--NPVAWNSLLGACLVHG 802
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 130/245 (53%), Gaps = 11/245 (4%)
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N++ +Y R ++ + + + R ++ +W I+I A HNG + E +ELF+ M +
Sbjct: 34 NLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWTILIVAHTHNGLFFEAVELFREMDVHGVQ 93
Query: 469 PDNYTFVSLLSACSK--LCNLALGSSLHGLIKKT--EIISSDTFVCNM-LIDMYGKCGSI 523
D +TF ++L ACS L L+LG ++H I + ++ S+ T +C+ +ID Y + G I
Sbjct: 94 SDEFTFSAILEACSNLGLAFLSLGKTIHSRIHQQGLKLTSNPTVICSTAMIDAYAQNGHI 153
Query: 524 GSSVKIFNEMT----DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
+ +IF M D ++I WTA+++A G A+ AL FR+M+ G +PDR A +A
Sbjct: 154 EQAAEIFERMQLQGLDPDLIAWTAMMTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAA 213
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
+ AC + +G L R+ S VE + + +++ + G + E+ + ++M
Sbjct: 214 IDACSSIPSLEQGTVLHSRLLAS-SVECDGVVGNALLNFYAKAGLVHESRSLFSSMKV-K 271
Query: 640 NALIW 644
N + W
Sbjct: 272 NVVTW 276
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
NL G ++H L T D ++CN+LI MYG+C S+ ++ +F+ ++ +NV TWT LI
Sbjct: 10 NLDAGRAVH-LQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNVFTWTILI 68
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL--VREGMELFERMNRS- 602
A NG A+E FREM+ G + D A+L AC + GL + G + R+++
Sbjct: 69 VAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIHSRIHQQG 128
Query: 603 --YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFP---PNALIWRTFL 648
P + ++D + GH+++A +I M P+ + W +
Sbjct: 129 LKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQGLDPDLIAWTAMM 179
>gi|297611068|ref|NP_001065556.2| Os11g0109800 [Oryza sativa Japonica Group]
gi|77548352|gb|ABA91149.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125533131|gb|EAY79679.1| hypothetical protein OsI_34825 [Oryza sativa Indica Group]
gi|125575946|gb|EAZ17168.1| hypothetical protein OsJ_32674 [Oryza sativa Japonica Group]
gi|255679705|dbj|BAF27401.2| Os11g0109800 [Oryza sativa Japonica Group]
Length = 748
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 191/662 (28%), Positives = 325/662 (49%), Gaps = 38/662 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP RN+VS+ +++SA + G R F+ MI GF P +F+ +L+ C S+
Sbjct: 50 MPQRNLVSWTAMVSASTGNGAPHLGFRFFVSMIRSGFCPNEFSLATMLTACHSMVAHSSN 109
Query: 60 QLQASVLKNGLFC-----ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+L ++ +G+ ++ FVG++LL +Y +HG + F + K L WN+++
Sbjct: 110 KLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLE 169
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ +GF + + S +A +++ + S + G Q+H LVI + +
Sbjct: 170 GYVLNGFGHHAIRTVLLMHHSGLAPDRYTYISAVKACSISAQWDLGRQLHCLVIHSMLES 229
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V NSLV+MYF+ +A +F+ + +D VSWNT+I A E+ + MS
Sbjct: 230 NTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMISGFAHDEDDKAVFGCLIDMS 289
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
PN+ TF ++ +N LG I A ++ +V V +A+++ ++C L
Sbjct: 290 RIGCKPNEVTFSVLLRLSGAKENESLGLQIVALAYRHGYTDNVLVANAVINMLSRCGLLN 349
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A+ F +++ NIV+WN +I GY S S ++ L L+ G RP+EFT+S VL
Sbjct: 350 RAYGFFCSLTSTNIVTWNEMIAGYGLFSHSEETMKLFRSLVCFGERPDEFTYSAVLS--- 406
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
AFQ Q G ++E + +++ K G F + + +++ AN+ A
Sbjct: 407 AFQEAQ--------GARDHEQIHATIL----KQG-------FASCQFVSTSLIKANVAA- 446
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI-YPDNY 472
G ++K++ + ++VSW +VI+A +G EV+ LF R PD +
Sbjct: 447 ----FGSVQISLKIIEDAGKMELVSWGVVISAFLKHGLNDEVIFLFNLFRGDSTNKPDEF 502
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
++L+AC+ + +H L+ KT S V + ++D Y KCG I S+ F
Sbjct: 503 ILATVLNACANAALIRHCRCIHSLVLKTGH-SKHFCVASAVVDAYAKCGEITSAESAFTV 561
Query: 533 MTD--RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
++ + I + +++A +G AL + EM P +A+L+AC H GLV
Sbjct: 562 VSSGTDDAILYNTMLTAYANHGLIHEALNLYEEMTKAKLSPTPATFVAILSACSHLGLVE 621
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+G +F M +YG+ P +Y C+VDLL R G L EA+ +I MPF P +WR+ + G
Sbjct: 622 QGKLVFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVIG 681
Query: 651 CQ 652
C+
Sbjct: 682 CR 683
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 157/598 (26%), Positives = 259/598 (43%), Gaps = 65/598 (10%)
Query: 73 ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL 132
A F LL Y R G LD + VF++MP+++LV+W ++VS +G F +
Sbjct: 22 AHTFNMNHLLIYYARRGLLDSALKVFDEMPQRNLVSWTAMVSASTGNGAPHLGFRFFVSM 81
Query: 133 VRSEVALTESSFVGVI---HGL--SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYF 187
+RS E S ++ H + + L +HG+ ++ G D V +SL+ MY
Sbjct: 82 IRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYA 141
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVY 247
+ I +A++ F + +D+ WN ++ + A+ L M + P++ T++
Sbjct: 142 KHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVLNGFGHHAIRTVLLMHHSGLAPDRYTYIS 201
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
+ +C+ LG+ +H VI + LE + V ++LVD Y + E A F +I K+
Sbjct: 202 AVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKD 261
Query: 308 IVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQL----LQLHC 362
VSWN +I G+A ++F LI++ ++G +PNE TFS +LR S A + LQ+
Sbjct: 262 TVSWNTMISGFAHDEDDKAVFGCLIDMSRIGCKPNEVTFSVLLRLSGAKENESLGLQIVA 321
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
L R GY + V +++ ++ GL++ A F +L V +IAG Y
Sbjct: 322 LAYRHGYTDNVLVANAVINMLSRCGLLNRAYGFFCSLTSTNIVTWNEMIAG-YGLFSHSE 380
Query: 423 ETVKLLSQL----ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
ET+KL L ERPD + Y VL F+ + AR +
Sbjct: 381 ETMKLFRSLVCFGERPDEFT-------------YSAVLSAFQEAQGARDHEQ-------- 419
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
+H I K S +++ GS+ S+KI + +
Sbjct: 420 --------------IHATILKQGFASCQFVSTSLIKANVAAFGSVQISLKIIEDAGKMEL 465
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLG---FKPDRVALIAVLTACRHGGLVREGMEL 595
++W +ISA +G + F F G KPD L VL AC + L+R
Sbjct: 466 VSWGVVISAFLKHGLNDEVIFLFN--LFRGDSTNKPDEFILATVLNACANAALIRHC--- 520
Query: 596 FERMNRSYGVEPEMDHYHC----VVDLLVRYGHLKEAEKIITTMPF-PPNALIWRTFL 648
R S ++ + C VVD + G + AE T + +A+++ T L
Sbjct: 521 --RCIHSLVLKTGHSKHFCVASAVVDAYAKCGEITSAESAFTVVSSGTDDAILYNTML 576
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 180/602 (29%), Positives = 302/602 (50%), Gaps = 43/602 (7%)
Query: 60 QLQASVLKNGLFCA--DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ A + GL + + ++L Y GC +F+++ SL +WN+++ ++
Sbjct: 39 QIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMYT 98
Query: 118 KHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G D + LF +++ S ++ ++ VI + E G IH + +GFD +
Sbjct: 99 NSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDA 158
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V NSL+ MY C + A ++F + R +VSWNT+I ++ +AL ++ M
Sbjct: 159 FVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGK 218
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ P+ T V V+ C+ L+ +G+ +HA V L D+ V ++L+D YAKC N++ A
Sbjct: 219 GIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEA 278
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF 355
+ F E+ +++VSW ++ GY S LL +++Q +PN T + VL + +
Sbjct: 279 QMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASL 338
Query: 356 QLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L+ LH IR E+ V +L+ YAK +
Sbjct: 339 YSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNV---------------------- 376
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
N + ++ S+ + WN +I+ C HNG ++ +ELFK M + P++
Sbjct: 377 ----------NLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPND 426
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
T SLL A + L +L ++HG + ++ +S V +LID+Y KCGS+ S+ IFN
Sbjct: 427 ATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSR-IEVATILIDIYSKCGSLESAHNIFN 485
Query: 532 EM--TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
+ D+++ITW+A+I+ G++G + A+ F +M G KP+ + ++L AC H GLV
Sbjct: 486 GIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLV 545
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG+ LF+ M + DHY CV+DLL R G L+EA ++I TM F PN +W L
Sbjct: 546 DEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLG 605
Query: 650 GC 651
C
Sbjct: 606 SC 607
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 157/555 (28%), Positives = 274/555 (49%), Gaps = 46/555 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLLSC--DSLNPVEGAQL 61
++ S+N++I Y+ G DAL +F+ M+ G P +T+ ++ D L P GA +
Sbjct: 86 SLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALI 145
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A + +G F +DAFV +L+ +Y G ++ VF+ M ++LV+WN++++ + K+G
Sbjct: 146 HARTVMSG-FDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGC 204
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
V++ + +F ++ + ++ V V+ S ++LE G ++H LV ++ V NS
Sbjct: 205 VKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNS 264
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L++MY +C + A+ +F +++ RDVVSW T++ + + AL L M + V PN
Sbjct: 265 LLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPN 324
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
T V+++CA L + G+ +H I+ LE +V V +AL+D YAKC+N+ + FS
Sbjct: 325 FVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFS 384
Query: 302 EISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF----- 355
+ S + WNA+I G S +I L ++L PN+ T + +L + AF
Sbjct: 385 KXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLL-PAYAFLTDLQ 443
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
Q +H +IR G+ + V L+ Y+K G + A NI GI
Sbjct: 444 QARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESA---------------HNIFNGIP 488
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ DI++W+ +IA +G + + LF M + + P+ TF
Sbjct: 489 KKD---------------KDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFT 533
Query: 476 SLLSACSK--LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
S+L ACS L + LG L + +D + C +ID+ G+ G + + ++ M
Sbjct: 534 SILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTC--VIDLLGRAGRLEEAYELIRTM 591
Query: 534 TDR-NVITWTALISA 547
R N W AL+ +
Sbjct: 592 AFRPNHAVWGALLGS 606
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 197/358 (55%), Gaps = 10/358 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M +R +VS+N++I+ Y + G V++AL +F +MI +G EP T +L C L +E G
Sbjct: 184 MRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVG 243
Query: 59 AQLQASV-LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
++ A V +KN D V +LL +Y + G +DE +F +M ++ +V+W ++++ +
Sbjct: 244 RRVHALVEVKN--LGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYI 301
Query: 118 KHGFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+G + L C++++ E V + V+ ++ L+ G +HG I+ + E+
Sbjct: 302 LNGDARSAL-LLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEV 360
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+V +L++MY +C + + ++F + WN II + KA+EL+ +M ++
Sbjct: 361 IVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLME 420
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN T ++ + A L + +++H +I++ + V + L+D Y+KC +LE A
Sbjct: 421 AVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESA 480
Query: 297 HLCFSEI--SNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
H F+ I +K+I++W+A+I GY T+I L +++Q G +PNE TF+ +L +
Sbjct: 481 HNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHA 538
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/527 (23%), Positives = 235/527 (44%), Gaps = 39/527 (7%)
Query: 132 LVRSEVALTESS-FVGVIHGLSNEQDLEFGEQIHGLVIKNGF---DYELLVANSLVNMYF 187
L +S+ LT ++ + ++ ++ + + +QIH I G Y + +SL Y
Sbjct: 8 LSKSKHLLTATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYA 67
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFV 246
C A K+F ++ + SWN +I S AL L+++M + +P+ T+
Sbjct: 68 MCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYP 127
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
+VI +C +G IHA+ + + + D FV ++L+ Y C +E A F + +
Sbjct: 128 FVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRER 187
Query: 307 NIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLII 365
+VSWN +I GY ++ + ++ G P+ T VL
Sbjct: 188 TLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLP--------------- 232
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDAL-AFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
+ SY K + + A V N+ + N + +Y + G +E
Sbjct: 233 --------------VCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEA 278
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+ ++++ D+VSW ++ NGD + L L + M+ + P+ T S+LSAC+ L
Sbjct: 279 QMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASL 338
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
+L G LHG + + + S+ V LIDMY KC ++ S ++F++ + + W A+
Sbjct: 339 YSLKHGRCLHGWAIRQK-LESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAI 397
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
IS NG +++A+E F++M P+ L ++L A +++ + + RS G
Sbjct: 398 ISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRS-G 456
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI-WRTFLEG 650
++ ++D+ + G L+ A I +P +I W + G
Sbjct: 457 FLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAG 503
>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
Length = 773
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 187/664 (28%), Positives = 325/664 (48%), Gaps = 42/664 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFT--FGGLLSCDSLNPVEGA 59
P + +NS+I + AL M+ G P+ FT S + GA
Sbjct: 72 PRPDAFLWNSLIRTHHCASDFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGA 131
Query: 60 QLQASVLKNGLFCADA---FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ A ++ GL D V ++L+ +Y R G + + V VFE+MP + +V W +++S
Sbjct: 132 AVHAYCVRYGLLVGDGDSVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGC 191
Query: 117 GKHGFVEDCMFLFCELVR----SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
++G + + E+VR V + + +L G +HG V+K G
Sbjct: 192 VRNGESGEGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGI 251
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+V ++L +MY +C A +F ++ +DVVSW ++IG +A+EL+ +
Sbjct: 252 GDSPMVISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQ 311
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M + P++ V++ N GK+ HA + K V +G+AL+ Y K +
Sbjct: 312 MMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEM 371
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
++ A F + ++ SWN +++GY L +QL + + + L S+
Sbjct: 372 VDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVADSLVSA 431
Query: 353 LAF--QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
++ +L +L R+G + Y + L+ + AN+
Sbjct: 432 ISSCSRLAEL-----RLGRSAHCYSIKHLLDEDSSV---------------------ANV 465
Query: 411 IAGIYNRTGQYNETVKL--LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+ G+Y R G+++ K+ L++L + D+V+WN +I++ AH G + L+ M +
Sbjct: 466 LIGMYGRCGKFDHACKIFGLAKL-KGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLT 524
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P++ T ++++SAC+ L L G +H +K+ D + LIDMY KCG +G + +
Sbjct: 525 PNSTTLITVISACANLVALERGEKIHSYVKEMGW-DYDVSINTALIDMYAKCGQLGIARR 583
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
IF+ M +V+ W +IS G++G A++ALE F +ME KP+ V +A+L+A H GL
Sbjct: 584 IFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGL 643
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ EG ++F RM + Y +EP + HY C+VDLL + GHL+EAE ++ MP P+ IW T L
Sbjct: 644 LEEGRKVFTRMGK-YSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLL 702
Query: 649 EGCQ 652
C+
Sbjct: 703 SACK 706
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 164/658 (24%), Positives = 297/658 (45%), Gaps = 101/658 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI----NRGFEPTQFTF-GGLLSCDSLNP 55
MP+R+VV++ ++IS R G + LR + M+ + P T GL +C L+
Sbjct: 176 MPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVLDE 235
Query: 56 V-EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+ G L V+K G+ + + +AL +Y + ++ ++F ++P K +V+W S++
Sbjct: 236 LNSGRCLHGYVVKVGIGDSPMVI-SALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIG 294
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
I+ + G + + M LF +++ S + E V+ GL N ++ G+ H ++ K F
Sbjct: 295 IYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGD 354
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+L+ N+L++MY + + SA ++F+ + RD SWN ++ ++ K LELY M
Sbjct: 355 SVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQ 414
Query: 235 VDIVFP---NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
+ + + V I+SC+ L LG+S H IK+ L+ D V + L+ Y +C
Sbjct: 415 LRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCG 474
Query: 292 NLEGAHLCFSEISNK-NIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVL 349
+ A F K ++V+WN LI YA S ++ L ++L G PN T V+
Sbjct: 475 KFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVI 534
Query: 350 RSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+ L+ +H + MG++ + +L+ YAK G L I R
Sbjct: 535 SACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCG----------QLGIAR-- 582
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
++ + + D+V+WN++I+ +G+ K+ LELF M
Sbjct: 583 --------------------RIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGG 622
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
I P+ TF+++LSA LC+ GL+++
Sbjct: 623 SIKPNGVTFLAILSA---LCH-------SGLLEEGR------------------------ 648
Query: 526 SVKIFNEMT----DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
K+F M + N+ + ++ LG +G Q A + M +PD +L+
Sbjct: 649 --KVFTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMP---IEPDGGIWGTLLS 703
Query: 582 ACRHGGLVREGMELFERM-NRSYGVEPEMDHYHCVVDLLVRYGHLK---EAEKIITTM 635
AC+ + + E+ R+ +++ +PE + Y+ ++ YG K E EK+ TM
Sbjct: 704 ACK----LHDNFEMGLRIAKKAFASDPENEGYYILIS--NSYGGAKKWDEIEKLRETM 755
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 127/299 (42%), Gaps = 42/299 (14%)
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
ALA + L R + A +++ Y+ G+ S RPD WN +I D
Sbjct: 34 ALAVTSGL-YQRPDLAAKLVSA-YSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCASD 91
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD---TF 508
+ L + M A+ P +T SA ++L L +G+++H + ++ D
Sbjct: 92 FVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVA 151
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V + L+ MY +CG++ +VK+F EM +R+V+ WTA+IS NG + L EM L
Sbjct: 152 VASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLA 211
Query: 569 ----FKPDRVALIAVLTACR-----------HGGLVREGM--------ELFERMNRSYGV 605
+P+ + + L AC HG +V+ G+ LF ++ Y
Sbjct: 212 GDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYST 271
Query: 606 E---------PEMD--HYHCVVDLLVRYGHLKEAEKIITTM---PFPPNALIWRTFLEG 650
E PE D + ++ + R G + EA ++ M P+ ++ L G
Sbjct: 272 EDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSG 330
>gi|125605681|gb|EAZ44717.1| hypothetical protein OsJ_29347 [Oryza sativa Japonica Group]
Length = 701
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 190/660 (28%), Positives = 328/660 (49%), Gaps = 55/660 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQAS 64
+ V +N+ +S R G A+ MF M+ EP FT+ G LS G +L
Sbjct: 25 SAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSA----CAAGEELSVG 80
Query: 65 VLKNGLFCA-----DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+GL D FVGT+L+ +Y + G + + F MP +++V+W + ++
Sbjct: 81 RAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIA----- 135
Query: 120 GFVED-----CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
GFV+D M L E+VR+ VA+ + + ++ + + QIHG+V+K
Sbjct: 136 GFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYL 195
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ +V +L++ Y I +EK+F++ + + W+ I ++ + + ++++L RM
Sbjct: 196 DCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRM 254
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ PN + V +S ++ G +H+ IK + VGSAL Y++CDN+
Sbjct: 255 FHQGLRPNDKCYASVFSSVNSIE---FGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNV 311
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSS 352
+ ++ F E+ ++ VSW A++ G+A+ FL + L G++P+ + + +L +
Sbjct: 312 QDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSA- 370
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ CL+ G E V G + Y ++ I+D F++
Sbjct: 371 ----CNRPECLL--KGKE----VHGHTLRVYGETTFINDC--FIS--------------- 403
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y++ ++ R D V W+ +I+ A NG +E + LF+ M AA I D+Y
Sbjct: 404 -MYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSY 462
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
S+LS C+ + LHG K I+S D V + L+ +Y + G++ S K+F+E
Sbjct: 463 ICSSILSLCADIARPFYCKPLHGYAIKAGILS-DQSVSSSLVKVYSRSGNMDDSRKVFDE 521
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
++ +++ WT +I +G +Q AL F M LG +PD V L++VL+AC GLV +G
Sbjct: 522 ISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQG 581
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M +YGVEPE+ HY C+VDLL R G L EA+ + +MP P+ ++W T L C+
Sbjct: 582 FNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACR 641
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/584 (23%), Positives = 260/584 (44%), Gaps = 62/584 (10%)
Query: 81 LLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALT 140
++ L + G L + + VF D S V WN+ VS ++G + +F ++V
Sbjct: 1 MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPN 60
Query: 141 ESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
++ G + + ++L G +HGLV++ +Y++ V SLVNMY +C + +A + F
Sbjct: 61 SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFW 120
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
+ +R+VVSW T I + + A+ L M + V N+ T ++ +CA +
Sbjct: 121 RMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVRE 180
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE---ISNKNIVSWNALILG 317
IH V+K + D V AL+ Y +E + F E +SN++I W+A I G
Sbjct: 181 ASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISG 238
Query: 318 YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLG 377
++ S S+ LL + G RPN+ ++ V S + + G
Sbjct: 239 VSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEF------------------GG 280
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
L +S K G I ++ + ++ +Y+R ++ K+ +++ D V
Sbjct: 281 QLHSSAIKEGFI-------------HGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGV 327
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SW ++A A +G E F+ M PD+ + ++LSAC++ L G +HG
Sbjct: 328 SWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHG-- 385
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
+ TF+ + I MY KC + ++ +IF+ ++ + W+++IS NG + A
Sbjct: 386 HTLRVYGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEA 445
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACR-----------HGGLVREGMELFERMNRSYGVE 606
+ F+ M + D ++L+ C HG ++ G+ + ++ S
Sbjct: 446 ISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSS---- 501
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+V + R G++ ++ K+ + P+ + W T ++G
Sbjct: 502 --------LVKVYSRSGNMDDSRKVFDEISV-PDLVAWTTIIDG 536
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 103/219 (47%), Gaps = 5/219 (2%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGA 59
P ++ V ++S+IS Y+ G E+A+ +F M+ + +LS D P
Sbjct: 422 PRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCK 481
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
L +K G+ +D V ++L+ +Y R G +D+ VF+++ LV W +I+ + +H
Sbjct: 482 PLHGYAIKAGIL-SDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQH 540
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG-EQIHGLVIKNGFDYELLV 178
G ++ + +F +V+ V V V+ S +E G + + G + EL
Sbjct: 541 GSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQH 600
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
+V++ + + A+ + ++ D++ W+T++ A
Sbjct: 601 YCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAA 639
>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 188/634 (29%), Positives = 319/634 (50%), Gaps = 36/634 (5%)
Query: 23 EDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQASVLKNGLFCADAFVGTA 80
E+A+ ++ M+ + T F F +L +C + GA++ ++K G F D F+ T+
Sbjct: 81 EEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIGAKVHGRIIKCG-FDNDPFIETS 139
Query: 81 LLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALT 140
LLGLYG GCL + VF+D+P + LV+W+SI+S + G + + +F LV V L
Sbjct: 140 LLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRLLVNERVKLD 199
Query: 141 ESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
+ V S L+ + IHG +++ D + NSL+ MY C ++SAE++F
Sbjct: 200 WVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDNSLIEMYSSCDDLYSAERIFV 259
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
++ + +SW ++I S F +A E++++M V PN T + V+ SC+GL
Sbjct: 260 NMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKSCSGLSWLRE 319
Query: 261 GKSIHAKVIKNALEC-DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
GK IH +K + D +G L++ YA C L I +N+VSWN L+ A
Sbjct: 320 GKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGERNVVSWNTLLSINA 379
Query: 320 SKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS 378
+ ++ L +++ + G + F+ S + + LQL I GY +LG
Sbjct: 380 RQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQI--HGYAIKRCILG- 436
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
+ K+ LI G+Y+R G + + + +++ V+
Sbjct: 437 ---EFVKNALI-----------------------GMYSRCGFSDSAYMIFNDIKQKSSVA 470
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
WN +I+ +G+ E + L M + + F+S + AC+ + L G LH +
Sbjct: 471 WNSIISGFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGKWLHHKLI 530
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
+ D ++ L DMY KCG + ++ +F+ M++++V++W+A+IS G++G A+
Sbjct: 531 MYG-VEKDLYIETALTDMYAKCGDLRTAEGVFHSMSEKSVVSWSAMISGYGMHGRIDAAI 589
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDL 618
F +M LG KP+ + + +L+AC H G V +G F+ M R +GVEP +H+ C+VDL
Sbjct: 590 TFFNQMVELGIKPNHITFMNILSACSHSGSVEQGKFYFDLM-RDFGVEPSSEHFACLVDL 648
Query: 619 LVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L R G + A KII +MPFP +A + L GC+
Sbjct: 649 LSRAGDVNGAYKIINSMPFPADASVLGNLLNGCR 682
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/462 (28%), Positives = 233/462 (50%), Gaps = 11/462 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
M ++ +S+ S+I Y+R G+ ++A +F+ M+ EP T G+L SC L+ + EG
Sbjct: 261 MANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKSCSGLSWLREG 320
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ LK G+ D +G L+ LY G L V + +++V+WN+++SI +
Sbjct: 321 KLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGERNVVSWNTLLSINAR 380
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E+ + LF ++ + + L S I N L+ G QIHG IK E V
Sbjct: 381 QGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRCILGE-FV 439
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+ MY +C SA +F D++ + V+WN+II +S N +A+ L +M ++ +
Sbjct: 440 KNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSIISGFVQSGNSIEAIHLVDQMYLNCL 499
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
F+ I +CA + GK +H K+I +E D+++ +AL D YAKC +L A
Sbjct: 500 KITDVVFLSAIQACADMVCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLRTAEG 559
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRS---SLA 354
F +S K++VSW+A+I GY +I ++++LG +PN TF ++L + S +
Sbjct: 560 VFHSMSEKSVVSWSAMISGYGMHGRIDAAITFFNQMVELGIKPNHITFMNILSACSHSGS 619
Query: 355 FQLLQLHCLIIR-MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP-RAVVPANIIA 412
+ + + ++R G E L+ +++G ++ A + ++ P A V N++
Sbjct: 620 VEQGKFYFDLMRDFGVEPSSEHFACLVDLLSRAGDVNGAYKIINSMPFPADASVLGNLLN 679
Query: 413 G--IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
G I+ R E K L ++ D ++++ A G++
Sbjct: 680 GCRIHQRMDMIPEIEKDLLKIRTSDTGHYSLLSNIYAEIGNW 721
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/545 (23%), Positives = 255/545 (46%), Gaps = 51/545 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS----CDSLNPV 56
+P R++VS++SIIS+Y G +AL MF ++N E + + +LS C L +
Sbjct: 160 IPVRDLVSWSSIISSYVDKGEANEALEMFRLLVN---ERVKLDWVIMLSVTEACSKLGIL 216
Query: 57 EGAQ-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
+ A+ + +++ + +A + +L+ +Y L +F +M K+ ++W S++
Sbjct: 217 KLAKSIHGYIVRRRVDTCEA-LDNSLIEMYSSCDDLYSAERIFVNMANKTFISWTSMIYC 275
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ + G+ ++ +F +++ +V + +GV+ S L G+ IH +K G ++
Sbjct: 276 YNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQ 335
Query: 176 -LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ L+ +Y C + EK+ + R+VVSWNT++ A F +AL L+++M
Sbjct: 336 DDCLGPVLIELYAGCGKLGYCEKVLLAIGERNVVSWNTLLSINARQGLFEEALVLFVQMQ 395
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ + + I++C + + LG+ IH IK + + FV +AL+ Y++C +
Sbjct: 396 KRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRCILGE-FVKNALIGMYSRCGFSD 454
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSL 353
A++ F++I K+ V+WN++I G+ + L++ + L + + F +++
Sbjct: 455 SAYMIFNDIKQKSSVAWNSIISGFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACA 514
Query: 354 AFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
L+ LH +I G E Y+ +L YAK G + A
Sbjct: 515 DMVCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLRTA----------------- 557
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
G+++ + +VSW+ +I+ +G + F M I P
Sbjct: 558 --EGVFH-------------SMSEKSVVSWSAMISGYGMHGRIDAAITFFNQMVELGIKP 602
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI-ISSDTFVCNMLIDMYGKCGSIGSSVK 528
++ TF+++LSACS ++ G L++ + SS+ F C L+D+ + G + + K
Sbjct: 603 NHITFMNILSACSHSGSVEQGKFYFDLMRDFGVEPSSEHFAC--LVDLLSRAGDVNGAYK 660
Query: 529 IFNEM 533
I N M
Sbjct: 661 IINSM 665
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 105/220 (47%), Gaps = 12/220 (5%)
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
A ++ N+ + + Y + G + + + PD W ++I + ++
Sbjct: 22 AHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQNPDSFMWGVLIKCHVWSHAFE 81
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
E + L+ M ++ F S+L AC+ ++ +G+ +HG I K +D F+ L
Sbjct: 82 EAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIGAKVHGRIIKCG-FDNDPFIETSL 140
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+ +YG+ G + + K+F+++ R++++W+++IS+ G A ALE FR + K D
Sbjct: 141 LGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRLLVNERVKLDW 200
Query: 574 VALIAVLTACR-----------HGGLVREGMELFERMNRS 602
V +++V AC HG +VR ++ E ++ S
Sbjct: 201 VIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDNS 240
>gi|242082542|ref|XP_002441696.1| hypothetical protein SORBIDRAFT_08g000870 [Sorghum bicolor]
gi|241942389|gb|EES15534.1| hypothetical protein SORBIDRAFT_08g000870 [Sorghum bicolor]
Length = 810
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 191/669 (28%), Positives = 322/669 (48%), Gaps = 54/669 (8%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVE-- 57
P RN+V++ +++SA R G + L + M+ GF P +F L C S +
Sbjct: 113 PRRNLVTWTAMVSAAVRGGAPDLGLALLSSMVRSGFCPNEFALASALGACCQSAAAADVK 172
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS--LVTWNSIVS 114
G L +K G + +VG++L+ LY +HG + V VF + S + WN+++
Sbjct: 173 LGLSLHGLAVKAGGLDGNPYVGSSLMLLYAKHGRVAAVERVFAGISSSSRDVACWNTMLE 232
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ G D M + S +A +++ + S DL FG Q+HGLVI + F+
Sbjct: 233 GYVATGRGYDVMRTVVLMHHSGIAADLFTYISAVKASSITCDLNFGRQVHGLVIHSEFES 292
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V N+L++MYF+ +A +F ++ +D VSWNT+I LA E+ A + + MS
Sbjct: 293 NTSVMNTLMDMYFKAGQKEAAVVIFGKIQWKDTVSWNTMISGLAHDEDERAAADCFFDMS 352
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
PNQ TF ++ +++ LG I ++ +V V +A+++ ++C L
Sbjct: 353 RYGCKPNQVTFSVMLRLSGAKESASLGLQILGLAYRHGYSDNVLVANAVINMLSQCGLLG 412
Query: 295 GAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A+ F +S +N+V+WN +I GY S ++ L L+ G RP+EFT+ VL
Sbjct: 413 CAYGFFCNLSVRNVVTWNEMIAGYGLHGCSEDAMRLFRSLVCFGARPDEFTYPAVLS--- 469
Query: 354 AFQL-------LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
AFQ Q+H +++ G+ + ++V SL+ + G + D L
Sbjct: 470 AFQQDHDARNHEQIHACVLKQGFASCQFVSTSLIKAKVALGSVLDPL------------- 516
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA-A 465
K++ + + D+VSW + I+A + KE L LF R
Sbjct: 517 -------------------KIIEEAGKMDLVSWGVTISAFVKHDLDKEALFLFNLFRVDC 557
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
PD + ++L+AC+ + +H L+ +T S V + L+D Y KCG I +
Sbjct: 558 PEKPDEFILGTILNACANAALIRQCRCIHALVVRTGH-SKHFCVSSALVDAYAKCGDITA 616
Query: 526 SVKIFNEMTD--RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ F E++ + I + +++A +G L +++M L P IAV++AC
Sbjct: 617 AKSTFAEVSSVTDDAILYNTMLTAYANHGLIHEVLSLYQDMTQLQLAPTPATFIAVISAC 676
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
H GLV +G LF M ++G+ P +Y C++DLL R G L+EA+ +I MPF P +
Sbjct: 677 SHLGLVEQGKLLFSSMLSAHGMNPTRANYTCLIDLLARRGLLEEAKGVIEAMPFQPWPAV 736
Query: 644 WRTFLEGCQ 652
WR+ + GC+
Sbjct: 737 WRSLMNGCR 745
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 145/578 (25%), Positives = 251/578 (43%), Gaps = 66/578 (11%)
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
AS +K G+ AD F LL Y + G L + VF++ PR++LVTW ++VS + G
Sbjct: 74 HASTIKLGV-SADTFTANHLLIYYAKRGHLGSALDVFDETPRRNLVTWTAMVSAAVRGGA 132
Query: 122 VEDCMFLFCELVRSEVALTE---SSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELL 177
+ + L +VRS E +S +G + D++ G +HGL +K G D
Sbjct: 133 PDLGLALLSSMVRSGFCPNEFALASALGACCQSAAAADVKLGLSLHGLAVKAGGLDGNPY 192
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDV--EIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V +SL+ +Y + + + E++F + RDV WNT++ + + + M
Sbjct: 193 VGSSLMLLYAKHGRVAAVERVFAGISSSSRDVACWNTMLEGYVATGRGYDVMRTVVLMHH 252
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ + T++ + + + + G+ +H VI + E + V + L+D Y K E
Sbjct: 253 SGIAADLFTYISAVKASSITCDLNFGRQVHGLVIHSEFESNTSVMNTLMDMYFKAGQKEA 312
Query: 296 AHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A + F +I K+ VSWN +I G A + + ++ + G +PN+ TFS +LR S A
Sbjct: 313 AVVIFGKIQWKDTVSWNTMISGLAHDEDERAAADCFFDMSRYGCKPNQVTFSVMLRLSGA 372
Query: 355 FQL----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ LQ+ L R GY + V +++ ++ GL+ A F L++
Sbjct: 373 KESASLGLQILGLAYRHGYSDNVLVANAVINMLSQCGLLGCAYGFFCNLSV--------- 423
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
++V+WN +IA +G ++ + LF+ + PD
Sbjct: 424 -----------------------RNVVTWNEMIAGYGLHGCSEDAMRLFRSLVCFGARPD 460
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+T+ ++LSA + + +H + K + +S FV LI GS+ +KI
Sbjct: 461 EFTYPAVLSAFQQDHDARNHEQIHACVLK-QGFASCQFVSTSLIKAKVALGSVLDPLKII 519
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEF-LGFKPDRVALIAVLTACRHGGLV 589
E ++++W ISA + + AL F KPD L +L AC + L+
Sbjct: 520 EEAGKMDLVSWGVTISAFVKHDLDKEALFLFNLFRVDCPEKPDEFILGTILNACANAALI 579
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
R+ C+ L+VR GH K
Sbjct: 580 RQ--------------------CRCIHALVVRTGHSKH 597
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
+S+DTF N L+ Y K G +GS++ +F+E RN++TWTA++SA G L
Sbjct: 82 VSADTFTANHLLIYYAKRGHLGSALDVFDETPRRNLVTWTAMVSAAVRGGAPDLGLALLS 141
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGL---VREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
M GF P+ AL + L AC V+ G+ L ++ G++ ++ L
Sbjct: 142 SMVRSGFCPNEFALASALGACCQSAAAADVKLGLSLHGLAVKAGGLDGNPYVGSSLMLLY 201
Query: 620 VRYGHLKEAEKIITTMPFPP-NALIWRTFLEG 650
++G + E++ + + W T LEG
Sbjct: 202 AKHGRVAAVERVFAGISSSSRDVACWNTMLEG 233
>gi|302818375|ref|XP_002990861.1| hypothetical protein SELMODRAFT_42073 [Selaginella moellendorffii]
gi|300141422|gb|EFJ08134.1| hypothetical protein SELMODRAFT_42073 [Selaginella moellendorffii]
Length = 517
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 175/526 (33%), Positives = 277/526 (52%), Gaps = 31/526 (5%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
+++ V+ S DL +Q H ++++G+ L V N+LV MY +C +A +F+ +
Sbjct: 3 TYLAVVDACSKLFDLNRAKQAHSRIVESGWHANLNVGNALVGMYGRCGDCQTARMVFEGL 62
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
+ VVSWNT+IGA A + AL L M ++ + ++ TF+ ++ +C GL +
Sbjct: 63 PEKTVVSWNTVIGAYARNGLAKDALRLMKAMDLEGMKADRITFLSLVEACTGLGCLAESR 122
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
+A+V+ + L DV V ++LV+ + K +L A L F I KN+VSWN ++ Y
Sbjct: 123 LAYARVVSSGLGSDVAVAASLVNMFGKSSSLADAKLAFDTIPEKNVVSWNVIMAAYNQNG 182
Query: 323 SPTSIFLLIELLQLGYR---PNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYV 375
PT E L+L Y P++ +F + L + ++ + L +H + R G+ + + V
Sbjct: 183 CPT------EALRLFYEMTEPDKVSFLYALDACVSLKALSDGRDVHASVTRHGFGS-DLV 235
Query: 376 LG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-- 432
LG +L+ Y+K +DA + + R V N + Y R G E V++ ++
Sbjct: 236 LGNALINMYSKCSSPADARNVFDGMTV-RDSVSWNTMIATYARNGFGEEAVEVFHEMALV 294
Query: 433 --RPDIV--SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
PD V +W +I A NG E +EL+K + + PD F S+L ACS NL
Sbjct: 295 GIPPDKVALTWARMITAYGQNGFGNEAIELYKQID---VVPDKVIFASVLDACSSAMNLE 351
Query: 489 LGSSLHGLI--KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
G +H I K EI DT V N L+D+YG CG G + ++F+ + R+V++WT+++
Sbjct: 352 EGKRIHARIVEGKFEI---DTVVNNTLLDLYGMCG-FGEARRVFDRLDKRDVVSWTSMMV 407
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
A +G + A++ F+EM+ G +PD VA +AVL AC H G R G + F M Y +E
Sbjct: 408 AYASHGSSLEAIDLFQEMQLQGMEPDEVAFLAVLFACNHAGFFRRGWDYFASMRGDYDLE 467
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
DHY CVVDLL R G L +AE +I +MPF P+ W + C
Sbjct: 468 AGADHYCCVVDLLGRAGRLADAEDLIVSMPFKPDEATWSALVGACN 513
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/490 (25%), Positives = 230/490 (46%), Gaps = 73/490 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+P++ VVS+N++I AY+R G +DALR+ M G + + TF L+ +C L + +
Sbjct: 62 LPEKTVVSWNTVIGAYARNGLAKDALRLMKAMDLEGMKADRITFLSLVEACTGLGCLAES 121
Query: 60 QLQ-ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+L A V+ +GL +D V +L+ ++G+ L + F+ +P K++V+WN I++ + +
Sbjct: 122 RLAYARVVSSGL-GSDVAVAASLVNMFGKSSSLADAKLAFDTIPEKNVVSWNVIMAAYNQ 180
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + LF E+ + + SF+ + + + L G +H V ++GF +L++
Sbjct: 181 NGCPTEALRLFYEMTEPD----KVSFLYALDACVSLKALSDGRDVHASVTRHGFGSDLVL 236
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS---- 234
N+L+NMY +C+ A +F + +RD VSWNT+I A + +A+E++ M+
Sbjct: 237 GNALINMYSKCSSPADARNVFDGMTVRDSVSWNTMIATYARNGFGEEAVEVFHEMALVGI 296
Query: 235 -------------------------------VDIVFPNQTTFVYVINSCAGLQNSILGKS 263
+D+V P++ F V+++C+ N GK
Sbjct: 297 PPDKVALTWARMITAYGQNGFGNEAIELYKQIDVV-PDKVIFASVLDACSSAMNLEEGKR 355
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS 323
IHA++++ E D V + L+D Y C E A F + +++VSW ++++ YAS S
Sbjct: 356 IHARIVEGKFEIDTVVNNTLLDLYGMCGFGE-ARRVFDRLDKRDVVSWTSMMVAYASHGS 414
Query: 324 PTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTS 382
L + +QL G P+E F LA H R G++ + + G
Sbjct: 415 SLEAIDLFQEMQLQGMEPDEVAF-------LAVLFACNHAGFFRRGWDYFASMRGD---- 463
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNI 441
++ + + R G+ + L+ + +PD +W+
Sbjct: 464 ----------------YDLEAGADHYCCVVDLLGRAGRLADAEDLIVSMPFKPDEATWSA 507
Query: 442 VIAACAHNGD 451
++ AC +GD
Sbjct: 508 LVGACNTHGD 517
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/519 (23%), Positives = 249/519 (47%), Gaps = 50/519 (9%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q + ++++G + A+ VG AL+G+YGR G VFE +P K++V+WN+++ + ++
Sbjct: 22 QAHSRIVESG-WHANLNVGNALVGMYGRCGDCQTARMVFEGLPEKTVVSWNTVIGAYARN 80
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G +D + L + + +F+ ++ + L + V+ +G ++ VA
Sbjct: 81 GLAKDALRLMKAMDLEGMKADRITFLSLVEACTGLGCLAESRLAYARVVSSGLGSDVAVA 140
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
SLVNM+ + + + A+ F + ++VVSWN I+ A ++ +AL L+ M+
Sbjct: 141 ASLVNMFGKSSSLADAKLAFDTIPEKNVVSWNVIMAAYNQNGCPTEALRLFYEMTE---- 196
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P++ +F+Y +++C L+ G+ +HA V ++ D+ +G+AL++ Y+KC + A
Sbjct: 197 PDKVSFLYALDACVSLKALSDGRDVHASVTRHGFGSDLVLGNALINMYSKCSSPADARNV 256
Query: 300 FSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F ++ ++ VSWN +I YA ++ + E+ +G P++ +A
Sbjct: 257 FDGMTVRDSVSWNTMIATYARNGFGEEAVEVFHEMALVGIPPDK----------VALTWA 306
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV--------VPANI 410
++ + G+ N L Y + ++ D + F + L+ + + A I
Sbjct: 307 RMITAYGQNGFGNEAIEL------YKQIDVVPDKVIFASVLDACSSAMNLEEGKRIHARI 360
Query: 411 IAG--------------IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
+ G +Y G + E ++ +L++ D+VSW ++ A A +G E +
Sbjct: 361 VEGKFEIDTVVNNTLLDLYGMCG-FGEARRVFDRLDKRDVVSWTSMMVAYASHGSSLEAI 419
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLI 514
+LF+ M+ + PD F+++L AC+ G ++ + +D + C ++
Sbjct: 420 DLFQEMQLQGMEPDEVAFLAVLFACNHAGFFRRGWDYFASMRGDYDLEAGADHYCC--VV 477
Query: 515 DMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNG 552
D+ G+ G + + + M + + TW+AL+ A +G
Sbjct: 478 DLLGRAGRLADAEDLIVSMPFKPDEATWSALVGACNTHG 516
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 196/420 (46%), Gaps = 55/420 (13%)
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ T++ V+++C+ L + K H++++++ ++ VG+ALV Y +C + + A + F
Sbjct: 1 KVTYLAVVDACSKLFDLNRAKQAHSRIVESGWHANLNVGNALVGMYGRCGDCQTARMVFE 60
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ- 359
+ K +VSWN +I YA L++ + L G + + TF ++ + L
Sbjct: 61 GLPEKTVVSWNTVIGAYARNGLAKDALRLMKAMDLEGMKADRITFLSLVEACTGLGCLAE 120
Query: 360 ---LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIP-RAVVPANIIAGI 414
+ ++ G + V SL+ + KS ++DA LAF T IP + VV N+I
Sbjct: 121 SRLAYARVVSSGLGSDVAVAASLVNMFGKSSSLADAKLAFDT---IPEKNVVSWNVIMAA 177
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
YN+ G E ++L ++ PD VS F
Sbjct: 178 YNQNGCPTEALRLFYEMTEPDKVS-----------------------------------F 202
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+ L AC L L+ G +H + + SD + N LI+MY KC S + +F+ MT
Sbjct: 203 LYALDACVSLKALSDGRDVHASVTR-HGFGSDLVLGNALINMYSKCSSPADARNVFDGMT 261
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI--AVLTACRHGGLVREG 592
R+ ++W +I+ NGF + A+E F EM +G PD+VAL ++TA G E
Sbjct: 262 VRDSVSWNTMIATYARNGFGEEAVEVFHEMALVGIPPDKVALTWARMITAYGQNGFGNEA 321
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI---ITTMPFPPNALIWRTFLE 649
+EL+++++ V P+ + V+D +L+E ++I I F + ++ T L+
Sbjct: 322 IELYKQID----VVPDKVIFASVLDACSSAMNLEEGKRIHARIVEGKFEIDTVVNNTLLD 377
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/516 (33%), Positives = 268/516 (51%), Gaps = 40/516 (7%)
Query: 158 EFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL 217
+ G++IHG V+K G D ++ V N+L+ MY +CA + A +F + RDVVSW+T+I +L
Sbjct: 111 QLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSL 170
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA--LEC 275
+ ++ F ALEL M+ V P++ V ++N A N +GK++HA VI+N+
Sbjct: 171 SRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHM 230
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELL 334
V +AL+D YAKC +L A F+ ++ K +VSW A+I G S L I +
Sbjct: 231 GVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQ 290
Query: 335 QLGYRPNEFTFSHVLRS---SLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
+ PNE T ++ + A QL QLH I+R G+ S
Sbjct: 291 EENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGF--------------------S 330
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
+LA TAL +Y + L + D++ W +++A A
Sbjct: 331 VSLALATAL------------VDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQAN 378
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
+ LF MR + + P T VSLLS C+ L LG +H I K E + D +
Sbjct: 379 CIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDK-ERVEVDCILN 437
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
L+DMY KCG I ++ ++F E R++ W A+I+ ++G+ + AL+ F EME G K
Sbjct: 438 TALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVK 497
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
P+ + I +L AC H GLV EG +LFE+M ++G+ P+++HY C+VDLL R G L EA +
Sbjct: 498 PNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHE 557
Query: 631 IITTMPFPPNALIWRTFLEGCQRCRIAKYDTLNSTK 666
+I +MP PN ++W + C+ + + L +T+
Sbjct: 558 MIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQ 593
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/526 (24%), Positives = 240/526 (45%), Gaps = 49/526 (9%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ VLK GL D FVG AL+ +YG C++ VF+ M + +V+W++++
Sbjct: 113 GKEIHGFVLKKGLD-RDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLS 171
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ + + L E+ +V +E + V +++ ++ ++ G+ +H VI+N + +
Sbjct: 172 RNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMG 231
Query: 178 V--ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V +L++MY +C + A ++F + + VVSW +I S + +L++RM
Sbjct: 232 VPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQE 291
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ +FPN+ T + +I C LGK +HA +++N + + +ALVD Y KC ++
Sbjct: 292 ENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRN 351
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
A F N++++ W A++ YA + F L + ++ G RP + T +L
Sbjct: 352 ARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAV 411
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
L LG + SY + TAL +
Sbjct: 412 AGALD----------------LGKWVHSYIDKERVEVDCILNTAL------------VDM 443
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y + G N +L + DI WN +I A +G +E L++F M + P++ TF
Sbjct: 444 YAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITF 503
Query: 475 VSLLSACSKLCNLALGSSL-------HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
+ LL ACS + G L GL+ + E + C ++D+ G+ G + +
Sbjct: 504 IGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIE-----HYGC--MVDLLGRAGLLDEAH 556
Query: 528 KIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
++ M + N I W AL++A L+ Q L + + L +P+
Sbjct: 557 EMIKSMPIKPNTIVWGALVAACRLHKNPQ--LGELAATQLLEIEPE 600
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 216/430 (50%), Gaps = 24/430 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
M +R+VVS++++I + SR + AL + M P++ +++ D+ N G
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214
Query: 59 AQLQASVLKNGLFCADAFVG----TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+ A V++N + +G TALL +Y + G L +F + +K++V+W ++++
Sbjct: 215 KAMHAYVIRNS---NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIA 271
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ +E+ LF + + E + + +I L+ G+Q+H +++NGF
Sbjct: 272 GCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSV 331
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
L +A +LV+MY +C+ I +A +F + RDV+ W ++ A A++ +A L+ +M
Sbjct: 332 SLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMR 391
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
V P + T V +++ CA LGK +H+ + K +E D + +ALVD YAKC ++
Sbjct: 392 TSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDIN 451
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTF-------S 346
A F E +++I WNA+I G+A ++ + E+ + G +PN+ TF S
Sbjct: 452 AAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACS 511
Query: 347 HVLRSSLAFQLLQ--LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PR 403
H + +L + +H + E+Y G ++ ++GL+ +A + ++ I P
Sbjct: 512 HAGLVTEGKKLFEKMVHTFGLVPQIEHY----GCMVDLLGRAGLLDEAHEMIKSMPIKPN 567
Query: 404 AVVPANIIAG 413
+V ++A
Sbjct: 568 TIVWGALVAA 577
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 182/385 (47%), Gaps = 29/385 (7%)
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
V+ +C + + LGK IH V+K L+ DVFVG+AL+ Y +C +E A L F ++ ++
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 159
Query: 308 IVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIR 366
+VSW+ +I + +K ++ L+ E+ + RP+E ++ L +R
Sbjct: 160 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVN-------LFADTANMR 212
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
MG + YV+ + + + +P + +Y + G +
Sbjct: 213 MGKAMHAYVIRNSNNEH---------------MGVPTTTA----LLDMYAKCGHLGLARQ 253
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
L + L + +VSW +IA C + +E +LF M+ I+P+ T +SL+ C
Sbjct: 254 LFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGA 313
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L LG LH I + S + L+DMYGKC I ++ +F+ +R+V+ WTA++S
Sbjct: 314 LQLGKQLHAYILRNG-FSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLS 372
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
A +A F +M G +P +V ++++L+ C G + G + +++ VE
Sbjct: 373 AYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKER-VE 431
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKI 631
+ +VD+ + G + A ++
Sbjct: 432 VDCILNTALVDMYAKCGDINAAGRL 456
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 3/184 (1%)
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
N+ S+L AC ++ LG +HG + K + + D FV N L+ MYG+C + + +F
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLK-KGLDRDVFVGNALMLMYGECACVEYARLVF 152
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
++M +R+V++W+ +I +L N ALE REM F+ +P VA+++++ +R
Sbjct: 153 DKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMR 212
Query: 591 EGMELFERMNRSYGVEP-EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
G + + R+ E + ++D+ + GHL A ++ + + W +
Sbjct: 213 MGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLT-QKTVVSWTAMIA 271
Query: 650 GCQR 653
GC R
Sbjct: 272 GCIR 275
>gi|115479139|ref|NP_001063163.1| Os09g0413300 [Oryza sativa Japonica Group]
gi|113631396|dbj|BAF25077.1| Os09g0413300 [Oryza sativa Japonica Group]
Length = 810
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 193/661 (29%), Positives = 330/661 (49%), Gaps = 57/661 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQAS 64
+ V +N+ +S R G A+ MF M+ EP FT+ G LS + G +L
Sbjct: 134 SAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACA----AGEELSVG 189
Query: 65 VLKNGLFCA-----DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+GL D FVGT+L+ +Y + G + + F MP +++V+W + ++
Sbjct: 190 RAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIA----- 244
Query: 120 GFVED-----CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
GFV+D M L E+VR+ VA+ + + ++ + + QIHG+V+K
Sbjct: 245 GFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYL 304
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ +V +L++ Y I +EK+F++ + + W+ I ++ + + ++++L RM
Sbjct: 305 DCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRM 363
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ PN + V +S NSI G +H+ IK + VGSAL Y++CDN
Sbjct: 364 FHQGLRPNDKCYASVFSSV----NSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDN 419
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS 351
++ ++ F E+ ++ VSW A++ G+A+ FL + L G++P+ + + +L +
Sbjct: 420 VQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSA 479
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ CL+ G E V G + Y ++ I+D F++
Sbjct: 480 -----CNRPECLL--KGKE----VHGHTLRVYGETTFINDC--FIS-------------- 512
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y++ ++ R D V W+ +I+ A NG +E + LF+ M AA I D+
Sbjct: 513 --MYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDS 570
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
Y S+LS C+ + LHG K I+S D V + L+ +Y + G++ S K+F+
Sbjct: 571 YICSSILSLCADIARPFYCKPLHGYAIKAGILS-DQSVSSSLVKVYSRSGNMDDSRKVFD 629
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
E++ +++ WT +I +G +Q AL F M LG +PD V L++VL+AC GLV +
Sbjct: 630 EISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQ 689
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G F M +YGVEPE+ HY C+VDLL R G L EA+ + +MP P+ ++W T L C
Sbjct: 690 GFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAAC 749
Query: 652 Q 652
+
Sbjct: 750 R 750
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 151/628 (24%), Positives = 282/628 (44%), Gaps = 65/628 (10%)
Query: 39 PTQFTFGGLLSCDSLNPVEGA--QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS 96
P+QF +G L+ + P Q+ + K+GL +A+V T ++ L + G L + +
Sbjct: 67 PSQFAYGNALAACARAPAPALAEQVYCAAWKDGL-SGNAYVCTGMVDLLAKSGRLRDALR 125
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF D S V WN+ VS ++G + +F ++V ++ G + + ++
Sbjct: 126 VFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEE 185
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L G +HGLV++ +Y++ V SLVNMY +C + +A + F + +R+VVSW T I
Sbjct: 186 LSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAG 245
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ + A+ L M + V N+ T ++ +CA + IH V+K + D
Sbjct: 246 FVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLD 305
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSE---ISNKNIVSWNALILGYASKSSPTSIFLLIEL 333
V AL+ Y +E + F E +SN++I W+A I G ++ S S+ LL +
Sbjct: 306 CVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISGVSNHSLLRSVQLLRRM 363
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
G RPN+ ++ V S + + G L +S K G I
Sbjct: 364 FHQGLRPNDKCYASVFSSVNSIEF------------------GGQLHSSAIKEGFI---- 401
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
++ + ++ +Y+R ++ K+ +++ D VSW ++A A +G
Sbjct: 402 ---------HGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSV 452
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
E F+ M PD+ + ++LSAC++ L G +HG + TF+ +
Sbjct: 453 EAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHG--HTLRVYGETTFINDCF 510
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
I MY KC + ++ +IF+ ++ + W+++IS NG + A+ F+ M + D
Sbjct: 511 ISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDS 570
Query: 574 VALIAVLTACR-----------HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
++L+ C HG ++ G+ + ++ S +V + R
Sbjct: 571 YICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSS------------LVKVYSRS 618
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEG 650
G++ ++ K+ + P+ + W T ++G
Sbjct: 619 GNMDDSRKVFDEISV-PDLVAWTTIIDG 645
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 103/219 (47%), Gaps = 5/219 (2%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGA 59
P ++ V ++S+IS Y+ G E+A+ +F M+ + +LS D P
Sbjct: 531 PRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCK 590
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
L +K G+ +D V ++L+ +Y R G +D+ VF+++ LV W +I+ + +H
Sbjct: 591 PLHGYAIKAGIL-SDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQH 649
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG-EQIHGLVIKNGFDYELLV 178
G ++ + +F +V+ V V V+ S +E G + + G + EL
Sbjct: 650 GSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQH 709
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
+V++ + + A+ + ++ D++ W+T++ A
Sbjct: 710 YCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAA 748
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 184/586 (31%), Positives = 282/586 (48%), Gaps = 57/586 (9%)
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG--FVEDCMFLFCELVRSEVALTESSFVG 146
G L +F+ +P + T+N ++ + D + L+ ++R VA +F
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
+ S D G IH I G +L V+ +L++MY +CA + A +F + RD
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 207 VVSWNTIIGALAESENFGKALE--LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+V+WN ++ A + A+ L ++M + + PN +T V ++ A G S+
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 265 HAKVIKNALECD----------VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
HA I+ L + V +G+AL+D YAKC +L A F + +N V+W+AL
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 315 ILGYASKSSPTSIFLLIE-LLQLGY---RPNEFTFSHVLRSSLAFQLL----QLHCLIIR 366
I G+ S T FLL + +L G P + + LR+ + L QLH L+ +
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAK 368
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
G SL++ YAK+GLI A+A
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIA-------------------------------- 396
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
L ++ D VS++ +++ NG +E +FK M+A + PD T VSL+ ACS L
Sbjct: 397 LFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAA 456
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L G HG + ++S+T +CN LIDMY KCG I S ++FN M R++++W +I+
Sbjct: 457 LQHGRCSHGSVI-IRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIA 515
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
G++G + A F EM LGF PD V I +L+AC H GLV EG F M YG+
Sbjct: 516 GYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLT 575
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
P M+HY C+VDLL R G L EA + I +MP + +W L C+
Sbjct: 576 PRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACR 621
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 139/573 (24%), Positives = 251/573 (43%), Gaps = 62/573 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCG--YVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE 57
+P +V ++N +I AYS D L ++ M+ P +TF L +C +L
Sbjct: 83 IPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHH 142
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G + + GL AD FV TALL +Y + CL + +F MP + LV WN++++ +
Sbjct: 143 CGRAIHRHAIHAGLQ-ADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGY 201
Query: 117 GKHGFVEDCM--FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI------ 168
HG + L ++ + S+ V ++ L+ + L G +H I
Sbjct: 202 AHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHP 261
Query: 169 ----KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
K+ +L+ +L++MY +C + A ++F + R+ V+W+ +IG
Sbjct: 262 NRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMT 321
Query: 225 KALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
+A L+ M + + F + T+ + +CA L + +G+ +HA + K+ + D+ G++L
Sbjct: 322 QAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSL 381
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNE 342
+ YAK ++ A F E++ K+ VS++AL+ GY FL+ + +Q P+
Sbjct: 382 LSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDA 441
Query: 343 FTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
T ++ + LQ G S + L
Sbjct: 442 ATMVSLIPACSHLAALQ--------------------------HGRCSHGSVIIRGLASE 475
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
++ N + +Y + G+ + + ++ + + DIVSWN +IA +G KE LF M
Sbjct: 476 TSIC--NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEM 533
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSL-------HGLIKKTEIISSDTFVCNMLID 515
PD TF+ LLSACS + G +GL + E ++C ++D
Sbjct: 534 NNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRME-----HYIC--MVD 586
Query: 516 MYGKCGSIGSSVKIFNEMTDR-NVITWTALISA 547
+ + G + + + M R +V W AL+ A
Sbjct: 587 LLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 619
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 20/253 (7%)
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV--LELFKYMRAARIYPDNYTFV 475
+G + L Q+ PD+ ++N +I A + + L L++ M R+ P+NYTF
Sbjct: 70 SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
L ACS L + G ++H + +D FV L+DMY KC + + IF M
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAG-LQADLFVSTALLDMYVKCACLPDAAHIFATMPA 188
Query: 536 RNVITWTALISALGLNGFAQRALEKF--REMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
R+++ W A+++ +G A+ +M+ +P+ L+A+L G + +G
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248
Query: 594 ELFERMNRSYGVEPEMDHYH----------CVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
+ R+ + P + ++D+ + G L A ++ MP N +
Sbjct: 249 SVHAYCIRAC-LHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP-ARNEVT 306
Query: 644 WRTFLEG---CQR 653
W + G C R
Sbjct: 307 WSALIGGFVLCSR 319
>gi|302756099|ref|XP_002961473.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
gi|300170132|gb|EFJ36733.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
Length = 643
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 177/616 (28%), Positives = 311/616 (50%), Gaps = 46/616 (7%)
Query: 47 LLSCDSLNPVEGA-QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS 105
L C S + A Q Q + ++G F D ++G L+ YG+ G + + VF+ + R++
Sbjct: 19 LRDCASARDLTAAKQAQWEIARDG-FGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQRRN 77
Query: 106 LVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHG 165
+ +W ++ + +G + + LF E+ +A+ + V + + DLE G IH
Sbjct: 78 IFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGIHA 137
Query: 166 LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
G++ E++VA +LV+MY +C + A+ +F + R+ VSWN ++ A A++ + +
Sbjct: 138 SARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHCEE 197
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
A+ LY M + + P+ TTFV V++ G G IH +V+++ + + +ALV
Sbjct: 198 AVRLYRLMCFEGIKPDATTFVSVLDGWKGEGEH--GTRIHDQVLESGFGSNTTLANALVS 255
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK---SSPTSIFL-LIELLQLGYRPN 341
Y ++ A F I+ K +VSWNA++ YA +F + E+ + PN
Sbjct: 256 MYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPN 315
Query: 342 EFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
TF ++L + A L+ +H + +G + V G+L+ Y++ G
Sbjct: 316 SVTFVNLLVACAATGFLEAGRKIHAEVASLGLLSTLSVGGALINMYSECG---------- 365
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
L + ++V + ++VSWN++I + A +GD KE L
Sbjct: 366 NLVLAKSV----------------------FDSVPHKNLVSWNVLIGSYAGDGDGKEALG 403
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
+ + M + PD +TF+S+L ACS LA G ++H LI + + D + LI++Y
Sbjct: 404 VHQKMELEGLKPDKFTFISVLHACSASEALAEGKAIHALIAASG-LERDEAIGTALINLY 462
Query: 518 GKCGSIGSSVKIFNEM-TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
GKCGS+ + +F +M + RN++TW ++++A G + +E M G PD +
Sbjct: 463 GKCGSLEQARNVFLDMKSRRNLVTWNSMLAAACTKGGLEDCVEIIHMMGLEGIMPDELTF 522
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
++VL AC HGG +++G++LF YG+ HY CVVD+L R G L+EA++++ MP
Sbjct: 523 LSVLFACSHGGSIQQGLDLFLSAGVDYGIATNTKHYVCVVDILGRVGRLEEAQEVLNRMP 582
Query: 637 FPPNALIWRTFLEGCQ 652
F N + W T L C+
Sbjct: 583 FQANDVAWMTLLGACR 598
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 160/557 (28%), Positives = 275/557 (49%), Gaps = 49/557 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPV-EGAQL 61
RN+ S+ ++ AY+ G+ +AL +F + +RG T L +C + EG +
Sbjct: 76 RNIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGI 135
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
AS G + ++ V TAL+ +YG+ G L+E +VF + ++ V+WN++++ + ++G
Sbjct: 136 HASARSLG-YESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGH 194
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E+ + L+ + + ++FV V+ G E E G +IH V+++GF +AN+
Sbjct: 195 CEEAVRLYRLMCFEGIKPDATTFVSVLDGWKGEG--EHGTRIHDQVLESGFGSNTTLANA 252
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS---VDIV 238
LV+MY + A +F + + VVSWN ++ A A++ +GKA++L+ +M +V
Sbjct: 253 LVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALV 312
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN TFV ++ +CA G+ IHA+V L + VG AL++ Y++C NL A
Sbjct: 313 EPNSVTFVNLLVACAATGFLEAGRKIHAEVASLGLLSTLSVGGALINMYSECGNLVLAKS 372
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F + +KN+VSWN LI YA + + ++L G +P++FTF VL + A +
Sbjct: 373 VFDSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDKFTFISVLHACSASEA 432
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L +H LI G E E + +L+ Y K G + A R V
Sbjct: 433 LAEGKAIHALIAASGLERDEAIGTALINLYGKCGSLEQA----------RNV-------- 474
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
L R ++V+WN ++AA G ++ +E+ M I PD T
Sbjct: 475 -------------FLDMKSRRNLVTWNSMLAAACTKGGLEDCVEIIHMMGLEGIMPDELT 521
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT--FVCNMLIDMYGKCGSIGSSVKIFN 531
F+S+L ACS ++ G L I+++T +VC ++D+ G+ G + + ++ N
Sbjct: 522 FLSVLFACSHGGSIQQGLDLFLSAGVDYGIATNTKHYVC--VVDILGRVGRLEEAQEVLN 579
Query: 532 EMT-DRNVITWTALISA 547
M N + W L+ A
Sbjct: 580 RMPFQANDVAWMTLLGA 596
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 136/521 (26%), Positives = 245/521 (47%), Gaps = 40/521 (7%)
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
R A+ SS ++ ++ +DL +Q + ++GF + + N LV Y +C +
Sbjct: 5 RDATAIAISSHASILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVR 64
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
A ++F ++ R++ SW ++GA A++ + +AL L+ + + + T V + +CA
Sbjct: 65 DAREVFDRIQRRNIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACA 124
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+ G+ IHA E ++ V +ALV Y KC +LE A F+ + +N VSWNA
Sbjct: 125 VAGDLEEGRGIHASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNA 184
Query: 314 LILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS--SLAFQLLQLHCLIIRMGYE 370
++ YA L L+ G +P+ TF VL ++H ++ G+
Sbjct: 185 MLAAYAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVLDGWKGEGEHGTRIHDQVLESGFG 244
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ + +L++ Y G + DA + GI +T
Sbjct: 245 SNTTLANALVSMYGSGGRVDDA---------------RYVFDGIAEKT------------ 277
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELF---KYMRAARIYPDNYTFVSLLSACSKLCNL 487
+VSWN ++ A A NG Y + ++LF MR A + P++ TFV+LL AC+ L
Sbjct: 278 -----VVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFVNLLVACAATGFL 332
Query: 488 ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISA 547
G +H + ++S+ + V LI+MY +CG++ + +F+ + +N+++W LI +
Sbjct: 333 EAGRKIHAEVASLGLLSTLS-VGGALINMYSECGNLVLAKSVFDSVPHKNLVSWNVLIGS 391
Query: 548 LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
+G + AL ++ME G KPD+ I+VL AC + EG + + S G+E
Sbjct: 392 YAGDGDGKEALGVHQKMELEGLKPDKFTFISVLHACSASEALAEGKAIHALIAAS-GLER 450
Query: 608 EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ +++L + G L++A + M N + W + L
Sbjct: 451 DEAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNSML 491
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 251/483 (51%), Gaps = 36/483 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQ 62
+RN VS+N++++AY++ G+ E+A+R++ M G +P TF +L G ++
Sbjct: 176 ERNRVSWNAMLAAYAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVLDGWKGEGEHGTRIH 235
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF---GKH 119
VL++G F ++ + AL+ +YG G +D+ VF+ + K++V+WN++++ + G++
Sbjct: 236 DQVLESG-FGSNTTLANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRY 294
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G D + E+ R+ V +FV ++ + LE G +IH V G L V
Sbjct: 295 GKAVDLFWKMDEMRRALVEPNSVTFVNLLVACAATGFLEAGRKIHAEVASLGLLSTLSVG 354
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+L+NMY +C + A+ +F V +++VSWN +IG+ A + +AL ++ +M ++ +
Sbjct: 355 GALINMYSECGNLVLAKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLK 414
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P++ TF+ V+++C+ + GK+IHA + + LE D +G+AL++ Y KC +LE A
Sbjct: 415 PDKFTFISVLHACSASEALAEGKAIHALIAASGLERDEAIGTALINLYGKCGSLEQARNV 474
Query: 300 FSEI-SNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F ++ S +N+V+WN+++ +K +I ++ L G P+E TF VL +
Sbjct: 475 FLDMKSRRNLVTWNSMLAAACTKGGLEDCVEIIHMMGLEGIMPDELTFLSVLFAC----- 529
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
H I+ G + + +S + + A N V +I+ R
Sbjct: 530 --SHGGSIQQGLDLF----------------LSAGVDYGIATNTKHYVCVVDILG----R 567
Query: 418 TGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
G+ E ++L+++ + + V+W ++ AC + D+++ Y+ + P N +
Sbjct: 568 VGRLEEAQEVLNRMPFQANDVAWMTLLGACRIHRDFEQGRRAADYV--IELDPQNAAPYA 625
Query: 477 LLS 479
LLS
Sbjct: 626 LLS 628
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 123/228 (53%), Gaps = 20/228 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
+P +N+VS+N +I +Y+ G ++AL + M G +P +FTF +L +C + + EG
Sbjct: 377 VPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDKFTFISVLHACSASEALAEG 436
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
+ A + +GL D +GTAL+ LYG+ G L++ +VF DM R++LVTWNS+++
Sbjct: 437 KAIHALIAASGLE-RDEAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAAC 495
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVI----HGLSNEQDLEFGEQIHGLVIKNGFD 173
G +EDC+ + + + E +F+ V+ HG S +Q L+ L + G D
Sbjct: 496 TKGGLEDCVEIIHMMGLEGIMPDELTFLSVLFACSHGGSIQQGLD-------LFLSAGVD 548
Query: 174 YELLVANS----LVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
Y + +V++ + + A+++ + + + V+W T++GA
Sbjct: 549 YGIATNTKHYVCVVDILGRVGRLEEAQEVLNRMPFQANDVAWMTLLGA 596
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/575 (27%), Positives = 304/575 (52%), Gaps = 35/575 (6%)
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
+YG+ G + + ++VF + + V+W IV+ F ++G + + + +V + +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
FV I S+ +DL+ G+ +H ++++ ++++++ +L+ MY +C + A K F ++
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRM---SVDIVFPNQTTFVYVINSCAGLQNSI 259
+ +V+WN +I + + + AL++Y M S + + P+ TF + +C + +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
G+ I A+ + + D V +AL++ Y+KC +LE A F + N+++++WN +I GYA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 320 SKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS 378
+ + T L + + +PN TF +L + + L+ I R E+
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVRED------- 293
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR-TGQYNETVKLLSQLERPDIV 437
G SD +V N++ +Y + + E ++ ++ D++
Sbjct: 294 --------GYESD-------------LVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVI 332
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
+WNI+I A G K+ L++FK M+ + P+ T ++LSAC+ L G ++H LI
Sbjct: 333 TWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALI 392
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
+D + N L++MY +CGS+ +V +F + D+++++W+ LI+A +G ++
Sbjct: 393 ASGRC-KADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTG 451
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
LE F E+ G D V +++ L+AC HGG+++EG++ F M +G+ P+ H+ C+VD
Sbjct: 452 LEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVD 511
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
LL R G L+ AE +I MPF P+A+ W + L GC+
Sbjct: 512 LLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCK 546
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 159/579 (27%), Positives = 284/579 (49%), Gaps = 53/579 (9%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEP--TQFTFGGLLSCDSLNPVEGAQLQ 62
N VS+ I++A++R G+ +AL + M+ G P F + S + +G L
Sbjct: 22 NSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLH 81
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
A +L+ L D +GTAL+ +Y R L+ F++M +K+LVTWN++++ + ++G
Sbjct: 82 AMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDH 141
Query: 123 EDCMFLFCELV-RSEVALTES--SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ ++ ++V +S + +F ++ + D+ G +I + +G+ + +V
Sbjct: 142 RGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQ 201
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L+NMY +C + SA K+F ++ RDV++WNT+I A+ +ALEL+ RM +
Sbjct: 202 NALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPK 261
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC-DNLEGAHL 298
PN TF+ ++ +C L++ G++IH KV ++ E D+ +G+ L++ Y KC +LE A
Sbjct: 262 PNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQ 321
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F + +++++WN LI+ Y + + +QL PNE T S+VL +
Sbjct: 322 VFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACA---- 377
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
VLG+ A LI+ VV N + +YNR
Sbjct: 378 -----------------VLGAKRQGKAVHALIASG-------RCKADVVLENSLMNMYNR 413
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G ++TV + + + +VSW+ +IAA A +G + LE F + + D+ T VS
Sbjct: 414 CGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVST 473
Query: 478 LSACSKLCNLALGSSL-------HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
LSACS L G HGL F+C ++D+ + G + ++ +
Sbjct: 474 LSACSHGGMLKEGVQTFLSMVGDHGLAPDYR-----HFLC--MVDLLSRAGRLEAAENLI 526
Query: 531 NEMT-DRNVITWTALISALGLNGFAQRA---LEKFREME 565
++M + + WT+L+S L+ +RA +K E+E
Sbjct: 527 HDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELE 565
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 252/495 (50%), Gaps = 53/495 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR---GFEPTQFTFG-GLLSCDSLNPV 56
M + +V++N++I+ YSR G AL+++ M+++ G +P TF L +C + +
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDI 179
Query: 57 -EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
+G +++A + +G + +D+ V AL+ +Y + G L+ VF+ + + ++ WN+++S
Sbjct: 180 SQGREIEARTVASG-YASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISG 238
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ K G + LF + ++ +F+G++ +N +DLE G IH V ++G++ +
Sbjct: 239 YAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESD 298
Query: 176 LLVANSLVNMYFQCAG-IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
L++ N L+NMY +C+ + A ++F+ + RDV++WN +I A + AL+++ +M
Sbjct: 299 LVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQ 358
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
++ V PN+ T V+++CA L GK++HA + + DV + ++L++ Y +C +L+
Sbjct: 359 LENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLD 418
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
F+ I +K++VSW+ LI YA S T + ELLQ G ++ T L +
Sbjct: 419 DTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACS 478
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
H +++ G + + ++G GL D F+ +++
Sbjct: 479 -------HGGMLKEGVQTFLSMVGD-------HGLAPDYRHFLCMVDL------------ 512
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY---- 468
+R G+ L+ + PD V+W +++ C + D K RAAR+
Sbjct: 513 -LSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTK---------RAARVADKLF 562
Query: 469 ----PDNYTFVSLLS 479
D ++ V+LLS
Sbjct: 563 ELESEDEHSTVTLLS 577
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 276/542 (50%), Gaps = 38/542 (7%)
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ K ++ + F + V +F ++ + DL+ G++IHG VI +GF +
Sbjct: 5 YAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWN 64
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L +VNMY +C I A MF + RD+V WNT+I A++ AL L LRMS
Sbjct: 65 LFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSE 124
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ P+ T V ++ + A + +G ++H V++ E V V +ALVD Y+KC ++
Sbjct: 125 EGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSI 184
Query: 296 AHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A + F + ++ +VSWN++I GY S + ++ + ++L G +P T L +
Sbjct: 185 ARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACAD 244
Query: 355 FQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
L+ +H L+ ++ ++ V+ SL++ Y+K R + A+I
Sbjct: 245 LGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKC---------------KRVDIAADI 289
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ N+T +VSWN +I A NG E L F M++ I PD
Sbjct: 290 FKNLRNKT-----------------LVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPD 332
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
++T VS++ A ++L +HGL+ + + + FV L+DMY KCG+I ++ K+F
Sbjct: 333 SFTMVSVIPALAELSIPRQAKWIHGLVIR-RFLDKNVFVMTALVDMYAKCGAIHTARKLF 391
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ M R+VITW A+I G +G + ++E F+EM+ KP+ + + L+AC H GLV
Sbjct: 392 DMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVE 451
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
EG+ FE M + YG+EP MDHY +VDLL R G L +A I MP P ++ L
Sbjct: 452 EGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGA 511
Query: 651 CQ 652
C+
Sbjct: 512 CK 513
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/544 (25%), Positives = 259/544 (47%), Gaps = 41/544 (7%)
Query: 12 IISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVLKNG 69
++ Y++ ++ AL F M + P + F LL D+ + G ++ SV+ +G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
F + F T ++ +Y + +++ ++F+ MP + LV WN+++S + ++GF + + L
Sbjct: 61 -FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLV 119
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
+ + V ++ +++ + L G +HG V++ GF+ + V+ +LV+MY +C
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A +F ++ R VVSWN++I +S + A+ ++ +M + V P T + +
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
++CA L + GK +H V + L+ DV V ++L+ Y+KC ++ A F + NK +V
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLV 299
Query: 310 SWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS----SLAFQLLQLHCLI 364
SWNA+ILGYA ++ E+ +P+ FT V+ + S+ Q +H L+
Sbjct: 300 SWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLV 359
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
IR + +V+ +L+ YAK G I A
Sbjct: 360 IRRFLDKNVFVMTALVDMYAKCGAIHTAR------------------------------- 388
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
KL + +++WN +I +G K +ELFK M+ I P++ TF+ LSACS
Sbjct: 389 -KLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHS 447
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT-WTA 543
+ G +KK I ++D+ G+ G + + +M + IT + A
Sbjct: 448 GLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGA 507
Query: 544 LISA 547
++ A
Sbjct: 508 MLGA 511
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 139/515 (26%), Positives = 247/515 (47%), Gaps = 56/515 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
MP+R++V +N++IS Y++ G+ + AL + L M G P T +L D+ G
Sbjct: 91 MPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIG 150
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ VL+ G F + V TAL+ +Y + G + +F+ M +++V+WNS++ + +
Sbjct: 151 MAVHGYVLRAG-FESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQ 209
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E M +F +++ V T + +G +H ++ DLE G+ +H LV + D ++ V
Sbjct: 210 SGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSV 269
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY +C + A +FK++ + +VSWN +I A++ +AL + M +
Sbjct: 270 MNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNI 329
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T V VI + A L K IH VI+ L+ +VFV +ALVD YAKC + A
Sbjct: 330 KPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARK 389
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F ++ +++++WNA+I GY + TS+ L E+ + +PN+ TF L
Sbjct: 390 LFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCAL-------- 441
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAG 413
++ + SGL+ + L F ++ + P +
Sbjct: 442 -----------------------SACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVD 478
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACA--HNGDY--KEVLELFKYMRAARIY 468
+ R G+ N+ + ++ +P I + ++ AC N D K E+FK +
Sbjct: 479 LLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFK------LN 532
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
PD+ + LL+ N+ +S+ G + K I
Sbjct: 533 PDDGGYHVLLA------NIYATASMWGKVAKVRTI 561
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 184/586 (31%), Positives = 282/586 (48%), Gaps = 57/586 (9%)
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG--FVEDCMFLFCELVRSEVALTESSFVG 146
G L +F+ +P + T+N ++ + D + L+ ++R VA +F
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
+ S D G IH I G +L V+ +L++MY +CA + A +F + RD
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 207 VVSWNTIIGALAESENFGKALE--LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+V+WN ++ A + A+ L ++M + + PN +T V ++ A G S+
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 265 HAKVIKNALECD----------VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
HA I+ L + V +G+AL+D YAKC +L A F + +N V+W+AL
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 315 ILGYASKSSPTSIFLLIE-LLQLGY---RPNEFTFSHVLRSSLAFQLL----QLHCLIIR 366
I G+ S T FLL + +L G P + + LR+ + L QLH L+ +
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHALLAK 368
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
G SL++ YAK+GLI A+A
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIA-------------------------------- 396
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
L ++ D VS++ +++ NG +E +FK M+A + PD T VSL+ ACS L
Sbjct: 397 LFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAA 456
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L G HG + ++S+T +CN LIDMY KCG I S ++FN M R++++W +I+
Sbjct: 457 LQHGRCSHGSVI-IRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIA 515
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
G++G + A F EM LGF PD V I +L+AC H GLV EG F M YG+
Sbjct: 516 GYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLT 575
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
P M+HY C+VDLL R G L EA + I +MP + +W L C+
Sbjct: 576 PRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACR 621
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/568 (23%), Positives = 252/568 (44%), Gaps = 52/568 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCG--YVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE 57
+P +V ++N +I AYS D L ++ M+ P +TF L +C +L
Sbjct: 83 IPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHH 142
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G + + GL AD FV TALL +Y + CL + +F MP + LV WN++++ +
Sbjct: 143 CGRAIHRHAIHAGLQ-ADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGY 201
Query: 117 GKHGFVEDCM--FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI------ 168
HG + L ++ + S+ V ++ L+ + L G +H I
Sbjct: 202 AHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHS 261
Query: 169 ----KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
K+ +L+ +L++MY +C + A ++F + R+ V+W+ +IG
Sbjct: 262 NRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMT 321
Query: 225 KALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
+A L+ M + + F + T+ + +CA L + +G+ +HA + K+ + D+ G++L
Sbjct: 322 QAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSL 381
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNE 342
+ YAK ++ A F E++ K+ VS++AL+ GY FL+ + +Q P+
Sbjct: 382 LSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDA 441
Query: 343 FTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
T ++ + LQ G S + L
Sbjct: 442 ATMVSLIPACSHLAALQ--------------------------HGRCSHGSVIIRGLASE 475
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
++ N + +Y + G+ + + ++ + + DIVSWN +IA +G KE LF M
Sbjct: 476 TSIC--NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEM 533
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKC 520
PD TF+ LLSACS + G +++ ++ + ++C ++D+ +
Sbjct: 534 NNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYIC--MVDLLSRG 591
Query: 521 GSIGSSVKIFNEMTDR-NVITWTALISA 547
G + + + M R +V W AL+ A
Sbjct: 592 GFLDEAYEFIQSMPLRADVRVWVALLGA 619
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 18/252 (7%)
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV--LELFKYMRAARIYPDNYTFV 475
+G + L Q+ PD+ ++N +I A + + L L++ M R+ P+NYTF
Sbjct: 70 SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
L ACS L + G ++H + +D FV L+DMY KC + + IF M
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAG-LQADLFVSTALLDMYVKCACLPDAAHIFATMPA 188
Query: 536 RNVITWTALISALGLNGFAQRALEKF--REMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
R+++ W A+++ +G A+ +M+ +P+ L+A+L G + +G
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248
Query: 594 E---------LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
L N + + ++D+ + G L A ++ MP N + W
Sbjct: 249 SVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP-ARNEVTW 307
Query: 645 RTFLEG---CQR 653
+ G C R
Sbjct: 308 SALIGGFVLCSR 319
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 191/641 (29%), Positives = 316/641 (49%), Gaps = 58/641 (9%)
Query: 32 MINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
MI G +P + F LL + L +E G Q+ A V K G V L+ LY + G
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH 149
V VF+ + ++ V+WNS++S E + F ++ V + + V V+
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 150 GLSN---EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
SN + L G+Q+H ++ G + + N+LV MY + + S++ + RD
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRD 179
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
+V+WNT++ +L ++E +ALE M ++ V P++ T V+ +C+ L+ GK +HA
Sbjct: 180 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 239
Query: 267 KVIKN-ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT 325
+KN +L+ + FVGSALVD Y C + F + ++ I WNA+I GY+
Sbjct: 240 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 299
Query: 326 SIFLLIELLQ--LGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
LL ++ G N T + V+ RS + +H +++ G + +V +L
Sbjct: 300 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 359
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
M +Y+R G+ + +++ ++E D+V+W
Sbjct: 360 MD--------------------------------MYSRLGKIDIAMRIFGKMEDRDLVTW 387
Query: 440 NIVIAACAHNGDYKEVLELFKYMR---------AARI--YPDNYTFVSLLSACSKLCNLA 488
N +I + +++ L L M+ A+R+ P++ T +++L +C+ L LA
Sbjct: 388 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 447
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G +H K + ++D V + L+DMY KCG + S K+F+++ +NVITW +I A
Sbjct: 448 KGKEIHAYAIKNNL-ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 506
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
G++G Q A++ R M G KP+ V I+V AC H G+V EG+ +F M YGVEP
Sbjct: 507 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPS 566
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN-ALIWRTFL 648
DHY CVVDLL R G +KEA +++ MP N A W + L
Sbjct: 567 SDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 607
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 144/570 (25%), Positives = 270/570 (47%), Gaps = 55/570 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-- 57
+ +RN VS+NS+IS+ E AL F M++ EP+ FT +++ C +L E
Sbjct: 72 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 131
Query: 58 --GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G Q+ A L+ G ++F+ L+ +YG+ G L + + LVTWN+++S
Sbjct: 132 MMGKQVHAYGLRKGEL--NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSS 189
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDY 174
++ + + + E+V V E + V+ S+ + L G+++H +KNG D
Sbjct: 190 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 249
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V ++LV+MY C + S ++F + R + WN +I +++E+ +AL L++ M
Sbjct: 250 NSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME 309
Query: 235 VDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ N TT V+ +C ++IH V+K L+ D FV + L+D Y++ +
Sbjct: 310 ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI 369
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ------------LGYRPN 341
+ A F ++ ++++V+WN +I GY LL+ +Q + +PN
Sbjct: 370 DIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 429
Query: 342 EFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
T +L S A L G E + Y + K+ L +D
Sbjct: 430 SITLMTILPSCAALSALA-------KGKEIHAYAI--------KNNLATD---------- 464
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
V + + +Y + G + K+ Q+ + ++++WN++I A +G+ +E ++L +
Sbjct: 465 ---VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRM 521
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGK 519
M + P+ TF+S+ +ACS + G + ++K + SSD + C ++D+ G+
Sbjct: 522 MMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC--VVDLLGR 579
Query: 520 CGSIGSSVKIFNEMT-DRNVI-TWTALISA 547
G I + ++ N M D N W++L+ A
Sbjct: 580 AGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 609
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 40/251 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMIN------RG-----FEPTQFTFGGLL- 48
M DR++V++N++I+ Y + EDAL + M N +G +P T +L
Sbjct: 379 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 438
Query: 49 SCDSLNPV-EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV 107
SC +L+ + +G ++ A +KN L D VG+AL+ +Y + GCL VF+ +P+K+++
Sbjct: 439 SCAALSALAKGKEIHAYAIKNNL-ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVI 497
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLV 167
TWN I+ +G HG ++ + L ++ V E +F+ V S+ ++ G +I V
Sbjct: 498 TWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YV 556
Query: 168 IKNGFDYE------------------LLVANSLVNMY---FQCAGIWS----AEKMFKDV 202
+K + E + A L+NM F AG WS A ++ ++
Sbjct: 557 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNL 616
Query: 203 EIRDVVSWNTI 213
EI ++ + N I
Sbjct: 617 EIGEIAAQNLI 627
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/502 (32%), Positives = 264/502 (52%), Gaps = 21/502 (4%)
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE--SEN 222
G+ ++N F Y N+L++ Y + A +F+ + D S+N ++ ALA +
Sbjct: 77 GIPLRNTFSY-----NALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGH 131
Query: 223 FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSA 282
G AL M D N +F +++CA ++ G+ +H V ++ DV +G+A
Sbjct: 132 AGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTA 191
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT--SIFLLIELLQLGYRP 340
LVD YAKC+ A F + +N+VSWN+LI Y ++ P ++ L +E++ G+ P
Sbjct: 192 LVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCY-EQNGPVGEALVLFVEMMATGFFP 250
Query: 341 NEFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAF 395
+E T S V+ + + Q+H +++ + VL +L+ YAK G +A
Sbjct: 251 DEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCI 310
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
++ V +I+AG Y ++ + + SQ+ ++++WN++IAA A NG+ +E
Sbjct: 311 FDSMPSRSVVSETSILAG-YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEA 369
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI-----ISSDTFVC 510
+ LF ++ I+P +YT+ ++L+AC + L LG H + K SD FV
Sbjct: 370 IRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVG 429
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
N L+DMY K GSI K+F M R+ ++W A+I NG A+ AL F M
Sbjct: 430 NSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNEN 489
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
PD V +I VL+AC H GLV EG F M +G+ P DHY C+VDLL R GHLKEAE+
Sbjct: 490 PDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEE 549
Query: 631 IITTMPFPPNALIWRTFLEGCQ 652
+I MP P++++W + L C+
Sbjct: 550 LIKDMPTEPDSVLWASLLGACR 571
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 151/581 (25%), Positives = 262/581 (45%), Gaps = 100/581 (17%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKN 68
N+++S Y+R G + +A R+F +
Sbjct: 55 LNTLVSTYARLGRLREARRVF--------------------------------------D 76
Query: 69 GLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG--FVEDCM 126
G+ + F ALL Y R G DE ++FE +P ++N++V+ +HG D +
Sbjct: 77 GIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDAL 136
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
+ + L SF + + E+DL GEQ+HGLV ++ ++ + +LV+MY
Sbjct: 137 RFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMY 196
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+C A ++F + R+VVSWN++I ++ G+AL L++ M FP++ T
Sbjct: 197 AKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLS 256
Query: 247 YVINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCD-------------- 291
V+++CAGL G+ +HA ++K + L D+ + +ALVD YAKC
Sbjct: 257 SVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPS 316
Query: 292 -----------------NLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIEL 333
N+E A + FS++ KN+++WN LI YA +I L ++L
Sbjct: 317 RSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQL 376
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
+ P +T+ +VL + +LQL G + + +VL K G D
Sbjct: 377 KRDSIWPTHYTYGNVLNACGNIAVLQL-------GQQAHVHVL--------KEGFRFD-- 419
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
V N + +Y +TG ++ K+ ++ D VSWN +I A NG K
Sbjct: 420 -----FGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAK 474
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS-LHGLIKKTEIISS-DTFVCN 511
+ L LF+ M + PD+ T + +LSAC + G H + + I S D + C
Sbjct: 475 DALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTC- 533
Query: 512 MLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISALGLN 551
++D+ G+ G + + ++ +M T+ + + W +L+ A L+
Sbjct: 534 -MVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLH 573
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 136/588 (23%), Positives = 244/588 (41%), Gaps = 121/588 (20%)
Query: 1 MPDRNVVSFNSIISAYSRC--GYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE 57
+PD + S+N++++A +R G+ DALR M F ++F LS C + +
Sbjct: 109 IPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLR 168
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+ ++ D +GTAL+ +Y + + VF+ MP +++V+WNS+++ +
Sbjct: 169 TGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYE 228
Query: 118 KHGFVEDCMFLFCELVRS---EVALTESSFVGVIHGLSNEQDLEFGEQIHG-LVIKNGFD 173
++G V + + LF E++ + +T SS + GL+ E++ G Q+H +V ++
Sbjct: 229 QNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAERE---GRQVHAHMVKRDRLR 285
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS------------------------ 209
++++ N+LV+MY +C W A +F + R VVS
Sbjct: 286 DDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQM 345
Query: 210 -------WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
WN +I A A++ +A+ L++++ D ++P T+ V+N+C + LG+
Sbjct: 346 VEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQ 405
Query: 263 SIHAKVIKNAL------ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
H V+K E DVFVG++LVD Y K +++ F ++ ++ VSWNA+I+
Sbjct: 406 QAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIV 465
Query: 317 GYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV 375
GYA L E +L P+ T VL
Sbjct: 466 GYAQNGRAKDALHLFERMLCSNENPDSVTMIGVL-------------------------- 499
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQL 431
++ SGL+ + + + P+ + + R G E +L+ +
Sbjct: 500 -----SACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDM 554
Query: 432 E-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
PD V W SLL AC N+ LG
Sbjct: 555 PTEPDSVLW-----------------------------------ASLLGACRLHKNVELG 579
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
G + + + +S +V +L +MY + G ++ M DR V
Sbjct: 580 ERTAGRLFELDPENSGPYV--LLSNMYAEMGKWADVFRVRRSMKDRGV 625
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 186/448 (41%), Gaps = 75/448 (16%)
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
++ H V+K+ + + F+ + LV YA+ L A F I +N S+NAL+ YA
Sbjct: 36 ARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYAR 95
Query: 321 KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM 380
P L E + P++ +++ V+ + + R G + L L
Sbjct: 96 LGRPDEARALFEAIP---DPDQCSYNAVVAA------------LARHGRGHAGDALRFLA 140
Query: 381 TSYAKSGLISDALAFVTALN---IPRAVVPANIIAGIYNRTGQYNET------VKLLSQL 431
+A + +A +F +AL+ + + + G+ R+ ++ V + ++
Sbjct: 141 AMHADD-FVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKC 199
Query: 432 ERP-------------DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
ERP ++VSWN +I NG E L LF M A +PD T S++
Sbjct: 200 ERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVM 259
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG----------------- 521
SAC+ L G +H + K + + D + N L+DMY KCG
Sbjct: 260 SACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSV 319
Query: 522 --------------SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
++ + +F++M ++NVI W LI+A NG + A+ F +++
Sbjct: 320 VSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRD 379
Query: 568 GFKPDRVALIAVLTACRHGGLVREGME-----LFERMNRSYGVEPEMDHYHCVVDLLVRY 622
P VL AC + +++ G + L E +G E ++ + +VD+ ++
Sbjct: 380 SIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKT 439
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEG 650
G + + K+ M N + W + G
Sbjct: 440 GSIDDGAKVFERMAARDN-VSWNAMIVG 466
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/598 (28%), Positives = 298/598 (49%), Gaps = 42/598 (7%)
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+S + + +G L+ +YGR D VF++MP ++ V+W S+++ ++G
Sbjct: 74 SSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRA 133
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
D + LF ++RS A + + + + D+ G Q+H +K+ +L+V N+L
Sbjct: 134 GDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNAL 193
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF-PN 241
V MY + + +F+ ++ +D++SW +II A+ +AL+++ M V+ PN
Sbjct: 194 VTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPN 253
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ F +C + + G+ IH IK L+ D++VG +L D YA+C NL+ A + F
Sbjct: 254 EFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFY 313
Query: 302 EISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL-----RSSLAF 355
I ++VSWN+++ Y+ + ++ L E+ G RP+ T +L R +L
Sbjct: 314 RIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYH 373
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L +H ++++G + V SL++ YA+ +S A+
Sbjct: 374 GRL-IHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAM---------------------- 410
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ +++ D+V+WN ++ ACA + +EVL+LF + + D +
Sbjct: 411 ----------DVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLN 460
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-T 534
++LSA ++L + +H K ++ D + N LID Y KCGS+ ++++F M
Sbjct: 461 NVLSASAELGYFEMVKQVHAYAFKAGLVD-DRMLSNTLIDTYAKCGSLDDAMRLFEIMGN 519
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+R+V +W++LI G+A+ A + F M LG +P+ V I VLTAC G V EG
Sbjct: 520 NRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCY 579
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ M YG+ P +H C+VDLL R G L EA I MPF P+ ++W+T L +
Sbjct: 580 YYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASK 637
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 160/572 (27%), Positives = 278/572 (48%), Gaps = 46/572 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPV-EG 58
MP RN VS+ S+I+A+ + G DAL +F M+ G QF G + +C L V G
Sbjct: 112 MPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTG 171
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A LK+ +D V AL+ +Y ++G +D+ +FE + K L++W SI++ F +
Sbjct: 172 RQVHAHALKSER-GSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQ 230
Query: 119 HGFVEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
GF + + +F E+ V E F E+GEQIHGL IK D +L
Sbjct: 231 QGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLY 290
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V SL +MY +C + SA F +E D+VSWN+I+ A + +AL L+ M
Sbjct: 291 VGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSG 350
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P+ T ++ +C G G+ IH+ ++K L+ DV V ++L+ YA+C +L A
Sbjct: 351 LRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAM 410
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP--NEFTFSHVLRSSLA- 354
F EI ++++V+WN+++ A + P + L LL P + + ++VL +S
Sbjct: 411 DVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKS-EPSLDRISLNNVLSASAEL 469
Query: 355 --FQLL-QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
F+++ Q+H + G + + +L+ +YAK G + DA+ + R
Sbjct: 470 GYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNR-------- 521
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
D+ SW+ +I A G KE +LF MR+ I P++
Sbjct: 522 -----------------------DVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNH 558
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+ +L+ACS++ + G + +++ I C+ ++D+ + G + + +
Sbjct: 559 VTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFID 618
Query: 532 EMT-DRNVITWTALISALGLNG---FAQRALE 559
+M + ++I W L++A ++ +RA E
Sbjct: 619 QMPFEPDIIMWKTLLAASKMHNDMEMGKRAAE 650
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 190/667 (28%), Positives = 305/667 (45%), Gaps = 85/667 (12%)
Query: 1 MPDRNVVSFNSIISAYSRC-GYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-E 57
MP RN VS+N++ISA +R G +A+ M+ M G PT FT +LS C L + +
Sbjct: 100 MPRRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGD 159
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + +K GL A+ FV ALLG+Y + G + + V +F M R + V++ +++
Sbjct: 160 GRRCHGVAVKVGLD-ANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLA 218
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN--------EQDLEFGEQIHGLVIK 169
+ G ++D + LF + RS V + S V+ + + G+ IH LV++
Sbjct: 219 QTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVR 278
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
GF + V NSL++MY +C + A K+F+ + +VSWN +I + + KA+E+
Sbjct: 279 KGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEV 338
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
M PN+ T+ ++ SC I + +H+
Sbjct: 339 LSLMQEAGFEPNEVTYSNLLASC------IKARDVHS----------------------- 369
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHV 348
A F +IS ++ +WN L+ GY + L +Q +P+ T + +
Sbjct: 370 ------ARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVI 423
Query: 349 LRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
L S +L Q+H +R N +V L+ Y+K G I
Sbjct: 424 LSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQI--------------- 468
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
I I+N+ + D+V WN +I+ + KE + FK MR
Sbjct: 469 ----GIARSIFNK-------------MTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRE 511
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
I P ++ S++++CS+L ++ G +H + K + + +V + LIDMY KCG++
Sbjct: 512 NGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMK-DGYDQNVYVGSALIDMYAKCGNMD 570
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
+ F+ M +N++ W +I NG +A+E F M KPD V IAVLT C
Sbjct: 571 DARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCS 630
Query: 585 HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
H GLV + M F M SYG+ P +HY C++D L R G E E +I MP + +IW
Sbjct: 631 HSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIW 690
Query: 645 RTFLEGC 651
L C
Sbjct: 691 EVLLAAC 697
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 132/521 (25%), Positives = 250/521 (47%), Gaps = 55/521 (10%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE-NFGKALELYLRMSVDIV 238
N+ ++ + + +A + + R+ VSWNT+I ALA S + G+A+E+Y RM + +
Sbjct: 78 NAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGL 137
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P T V+++C GL G+ H +K L+ + FV +AL+ Y KC ++ A
Sbjct: 138 LPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVR 197
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRS------ 351
F ++ N VS+ A++ G A S ++ L + + G + + S VL +
Sbjct: 198 LFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACA 257
Query: 352 -----SLAFQLLQ-LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR-A 404
+ AF+L Q +H L++R G+ + ++V SL+ Y K + +A+ +L P
Sbjct: 258 TDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESL--PSVT 315
Query: 405 VVPANIIAGIYNRTGQYNETVKLLS----------------------------------- 429
+V NI+ + + G + V++LS
Sbjct: 316 IVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFD 375
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
++ RP + +WN +++ +++ +ELF+ M+ + PD T +LS+CSKL L
Sbjct: 376 KISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDF 435
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G +H + ++ +D FV + L+DMY KCG IG + IFN+MT+R+V+ W ++IS L
Sbjct: 436 GRQVHSASVRF-LLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLT 494
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
++ + A + F++M G P + +++ +C + G ++ ++ + G + +
Sbjct: 495 IHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKD-GYDQNV 553
Query: 610 DHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++D+ + G++ +A TM N + W + G
Sbjct: 554 YVGSALIDMYAKCGNMDDARLFFDTM-MMKNIVAWNEMIHG 593
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G H L+ + S + + N + + G + ++ + M RN ++W +ISAL
Sbjct: 57 GLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALA 116
Query: 550 LN-GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ G A+E + M G P L +VL+AC GGL G
Sbjct: 117 RSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSAC--GGLAALG 158
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 174/561 (31%), Positives = 282/561 (50%), Gaps = 45/561 (8%)
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
MPRK++V W S++S + ++G E + +F ++V S VA + + + ++ L G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
EQ+H L ++ GF + + + L+ MY +C + +A+++F ++ DVV + ++I A +
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA--LECDVF 278
F A E ++M + PN+ T ++ +C +LG+ IH +IK V+
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTACP----RVLGQQIHGYLIKKIGLRSQSVY 176
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLG 337
+AL+DFY++ + A F + KN+VSW +++ Y ++ + +++ G
Sbjct: 177 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 236
Query: 338 YRPNEFTFSHVLRSSLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
PNEF S VL + + L QLHC I K LI+D
Sbjct: 237 VDPNEFALSIVLGACGSIGLGRQLHCSAI-------------------KHDLITD----- 272
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
+ +N + +Y RTG E +L+++E PD+VSW I+A NG ++ +
Sbjct: 273 --------IRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAI 324
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC--NMLI 514
L M + P+ Y F S+LS+C+ + +L G H L K + D+ +C N LI
Sbjct: 325 ALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALK---LGCDSEICTGNALI 381
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
+MY KCG +GS+ F+ M +V +W +LI +G A +ALE F +M G KPD
Sbjct: 382 NMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDS 441
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
+ VL C H G+V EG F M Y P HY C++D+L R G EA ++I
Sbjct: 442 TFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMIND 501
Query: 635 MPFPPNALIWRTFLEGCQRCR 655
MPF P+ALIW+T L C+ R
Sbjct: 502 MPFEPDALIWKTLLASCKLHR 522
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/563 (24%), Positives = 262/563 (46%), Gaps = 54/563 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
MP +NVV++ S++S Y+R G E AL MF M+ G P F L++C L + G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + ++ G F DA++G+ L+ +Y R G L VF+ M +V + S++S F +
Sbjct: 61 EQVHSLAVRAG-FAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCR 119
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYE-L 176
+G E ++++ + E + ++ G+QIHG +IK G + +
Sbjct: 120 NGEFELAAEALIQMLKQGLKPNEHTMTTILTACPR----VLGQQIHGYLIKKIGLRSQSV 175
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ +L++ Y + A+ +F + ++VVSW +++ +AL+++ M +
Sbjct: 176 YSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISE 235
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN+ V+ +C + LG+ +H IK+ L D+ V +AL+ Y + +E
Sbjct: 236 GVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEEL 292
Query: 297 HLCFSEISNKNIVSW-NALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
++I N ++VSW A+ + + +I LL ++ G+ PN + FS VL S
Sbjct: 293 EAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADV 352
Query: 356 ----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
Q +Q HCL +++G ++ + N +
Sbjct: 353 ASLDQGMQFHCLALKLGCDS--------------------------------EICTGNAL 380
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y++ GQ + D+ SWN +I A +GD + LE+F MR+ I PD+
Sbjct: 381 INMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDD 440
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLI--KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
TF+ +L C+ + G L+ + + + + C +IDM G+ G ++++
Sbjct: 441 STFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYAC--MIDMLGRNGRFDEALRM 498
Query: 530 FNEMT-DRNVITWTALISALGLN 551
N+M + + + W L+++ L+
Sbjct: 499 INDMPFEPDALIWKTLLASCKLH 521
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 175/608 (28%), Positives = 303/608 (49%), Gaps = 69/608 (11%)
Query: 81 LLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF----------- 129
LL + G +++ +F+ MP+K +WN+++S + G + + LF
Sbjct: 71 LLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITW 130
Query: 130 -----------C-----ELVRS----EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
C +L RS ++ + V+ S+ ++ GE IHG V+K
Sbjct: 131 SSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVK 190
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI--RDVVSWNTIIGALAESENFGKAL 227
NGF+ + V LV+MY +C + AE +FK +E ++ V W ++ A++ + KA+
Sbjct: 191 NGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAV 250
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
E + M V NQ TF ++ +C+ + G+ +H ++K+ +V+V SALVD Y
Sbjct: 251 EFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMY 310
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFS 346
AKC +L+ A + + ++VSWN+L++G+ ++ L + + +++TF
Sbjct: 311 AKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFP 370
Query: 347 HVLRSSL--AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
VL + + +H LII+ G+ENY+ V +L+ YAK
Sbjct: 371 SVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAK------------------- 411
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
TG + + ++ D++SW ++ A N ++E L++F MR
Sbjct: 412 -------------TGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRV 458
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+ PD + S+LSAC++L L G +H K+ + S + V N L+ MY KCG +
Sbjct: 459 TGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQS-VYNSLVAMYAKCGCLD 517
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
+ IF M ++VITWTA+I NG + +L+ + M G +PD + I +L AC
Sbjct: 518 DADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACS 577
Query: 585 HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
H GLV EG + F++MN+ YG++P +HY C++DL R G L EA++++ M P+A +W
Sbjct: 578 HAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVW 637
Query: 645 RTFLEGCQ 652
++ L C+
Sbjct: 638 KSLLSACR 645
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 154/572 (26%), Positives = 275/572 (48%), Gaps = 52/572 (9%)
Query: 15 AYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQASVLKNGLFC 72
Y + G +A +F M G++ +QFT G +L C SL ++ G + V+KNG F
Sbjct: 136 GYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNG-FE 194
Query: 73 ADAFVGTALLGLYGRHGCLDEVVSVFE--DMPRKSLVTWNSIVSIFGKHGFVEDCMFLFC 130
+ FV T L+ +Y + C+ E +F+ + RK+ V W ++V+ + ++G + F
Sbjct: 195 GNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFR 254
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
+ V + +F ++ S+ FGEQ+HG ++K+GF + V ++LV+MY +C
Sbjct: 255 YMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCG 314
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
+ +A+ M + +E DVVSWN+++ +AL L+ M + + TF V+N
Sbjct: 315 DLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLN 374
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
C + SI KS+H +IK E V +ALVD YAK +++ A+ F ++ K+++S
Sbjct: 375 CC--VVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVIS 432
Query: 311 WNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLII 365
W +L+ GYA +S S+ + ++ G P++F + +L + LL Q+H I
Sbjct: 433 WTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFI 492
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
+ G + V SL+ YAK G + DA A ++ +
Sbjct: 493 KSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQV------------------------ 528
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
D+++W +I A NG + L+ + M ++ PD TF+ LL ACS
Sbjct: 529 --------KDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAG 580
Query: 486 NLALGSSLHGLIKKTEIIS--SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWT 542
+ G + K I + + C +ID++G+ G + + ++ ++M + + W
Sbjct: 581 LVDEGRKYFQQMNKVYGIKPGPEHYAC--MIDLFGRSGKLDEAKQLLDQMDVKPDATVWK 638
Query: 543 ALISALGLN---GFAQRALEKFREMEFLGFKP 571
+L+SA ++ A+RA E+E + P
Sbjct: 639 SLLSACRVHENLELAERAATNLFELEPMNAMP 670
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 227/455 (49%), Gaps = 50/455 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDS-LNPVEGAQL 61
+N V + ++++ Y++ G A+ F YM +G E Q+TF +L+ C S L G Q+
Sbjct: 228 KNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQV 287
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
++K+G F ++ +V +AL+ +Y + G L ++ E M +V+WNS++ F +HG
Sbjct: 288 HGFIVKSG-FGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGL 346
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIH----GLSNEQDLEFGEQIHGLVIKNGFDYELL 177
E+ + LF + + + + +F V++ G N + +HGL+IK GF+ L
Sbjct: 347 EEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPK------SVHGLIIKTGFENYKL 400
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V+N+LV+MY + + A +F+ + +DV+SW +++ A++ + ++L+++ M V
Sbjct: 401 VSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTG 460
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+Q ++++CA L GK +H IK+ L V ++LV YAKC L+ A
Sbjct: 461 VNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDAD 520
Query: 298 LCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + K++++W A+I+GYA S+ ++ G RP+ TF
Sbjct: 521 AIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFI---------- 570
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN----IIA 412
L+ + + +GL+ + + +N + P +
Sbjct: 571 ---------------------GLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMI 609
Query: 413 GIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
++ R+G+ +E +LL Q++ +PD W +++AC
Sbjct: 610 DLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSAC 644
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 140/514 (27%), Positives = 228/514 (44%), Gaps = 83/514 (16%)
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII------GALAESE----------- 221
N L+N + + A K+F + +D SWNT+I G L E+
Sbjct: 68 TNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSS 127
Query: 222 -----------NFG---KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
FG +A +L+ M ++ +Q T V+ C+ L G+ IH
Sbjct: 128 ITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGF 187
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS--EISNKNIVSWNALILGYASKSSPT 325
V+KN E +VFV + LVD YAKC + A F E KN V W A++ GYA
Sbjct: 188 VVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGY 247
Query: 326 SIFLLIELLQL-GYRPNEFTFSHVLR--SSLAFQLL--QLHCLIIRMGYENYEYVLGSLM 380
+ G N++TF +L SS+ + Q+H I++ G+ + YV +L+
Sbjct: 248 KAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALV 307
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
YAK G + +A +L +E D+VSWN
Sbjct: 308 DMYAKCGDLKNA--------------------------------KNMLETMEDDDVVSWN 335
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS----SLHGL 496
++ +G +E L LFK M + D+YTF S+L+ C +GS S+HGL
Sbjct: 336 SLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC------VVGSINPKSVHGL 389
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
I KT + V N L+DMY K G + + +F +M +++VI+WT+L++ N +
Sbjct: 390 IIKTG-FENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEE 448
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
+L+ F +M G PD+ + ++L+AC L+ G ++ +S G+ Y+ +V
Sbjct: 449 SLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKS-GLRWSQSVYNSLV 507
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + G L +A+ I +M + + W + G
Sbjct: 508 AMYAKCGCLDDADAIFVSMQV-KDVITWTAIIVG 540
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 138/257 (53%), Gaps = 3/257 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M D +VVS+NS++ + R G E+ALR+F M R + +TF +L+C + +
Sbjct: 326 MEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKS 385
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ ++K G F V AL+ +Y + G +D +VFE M K +++W S+V+ + ++
Sbjct: 386 VHGLIIKTG-FENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNN 444
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
E+ + +FC++ + V + ++ + LEFG+Q+H IK+G + V N
Sbjct: 445 SHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYN 504
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SLV MY +C + A+ +F ++++DV++W II A++ +L+ Y M P
Sbjct: 505 SLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRP 564
Query: 241 NQTTFVYVINSC--AGL 255
+ TF+ ++ +C AGL
Sbjct: 565 DFITFIGLLFACSHAGL 581
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 127/310 (40%), Gaps = 63/310 (20%)
Query: 393 LAFVTALNIPRA-----VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
+AF+ +++ A + N + +++GQ N+ KL ++ + D SWN +I++
Sbjct: 48 MAFLRSIHTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYV 107
Query: 448 HNGDYKEVLE-------------------------------LFKYMRAARIYPDNYTFVS 476
+ G E E LF+ MR +T S
Sbjct: 108 NVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGS 167
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN--EMT 534
+L CS L + G +HG + K + FV L+DMY KC + + +F E
Sbjct: 168 VLRVCSSLGLIQTGEMIHGFVVKNG-FEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFD 226
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR---------- 584
+N + WTA+++ NG +A+E FR M G + ++ +LTAC
Sbjct: 227 RKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQ 286
Query: 585 -HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
HG +V+ G +G + +VD+ + G LK A+ ++ TM + +
Sbjct: 287 VHGFIVKSG----------FGSNVYVQ--SALVDMYAKCGDLKNAKNMLETME-DDDVVS 333
Query: 644 WRTFLEGCQR 653
W + + G R
Sbjct: 334 WNSLMVGFVR 343
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/559 (30%), Positives = 280/559 (50%), Gaps = 66/559 (11%)
Query: 132 LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
LVR S F ++ + +H ++ F E+ + N L+++Y +C
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 192 IWSAEKMFKDVEIR-------------------------------DVVSWNTIIGALAES 220
+ A K+F + R D SWN+++ A+
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
+ F ++LE +++M + N+ +F +++CAGL + +G +HA V K+ DV++G
Sbjct: 126 DRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMG 185
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS--IFLLIELLQLGY 338
SAL+D Y+KC ++ A FS + +N+V+WN+LI Y ++ P S + + + ++ G
Sbjct: 186 SALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCY-EQNGPASEALEVFVRMMDSGL 244
Query: 339 RPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDAL 393
P+E T + V+ + + + LQ+H +++ + VLG +L+ YAK +++A
Sbjct: 245 EPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEAR 304
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
++I V ++++G Y R + S++ + ++VSWN +IA NG+ +
Sbjct: 305 RVFDRMSIRNVVSETSMVSG-YARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENE 363
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
E L LF+ ++ I+P +YTF +LL SD FV N L
Sbjct: 364 EALRLFRLLKRESIWPTHYTFGNLLK-------------------------SDIFVGNSL 398
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
IDMY KCGSI ++F +M +R+ ++W A+I NG+ AL+ FR+M G KPD
Sbjct: 399 IDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDH 458
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
V +I VL AC H GLV EG F M +G+ P DHY C+VDLL R G L EA+ +I
Sbjct: 459 VTMIGVLCACSHAGLVEEGRHYFFSME-EHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIE 517
Query: 634 TMPFPPNALIWRTFLEGCQ 652
MP P+A++W + L C+
Sbjct: 518 AMPVNPDAVVWGSLLAACK 536
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/574 (24%), Positives = 259/574 (45%), Gaps = 78/574 (13%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
N +I Y +C ++DA ++F M R
Sbjct: 54 NRLIDVYGKCDCLDDARKLFDRMPQR---------------------------------- 79
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
+ F +L+ + + G LDE +F MP +WNS+VS F +H E+ + F
Sbjct: 80 ----NTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYF 135
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
++ R + L E SF + + DL G Q+H LV K+ + ++ + ++L++MY +C
Sbjct: 136 VKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKC 195
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ AE++F + R++V+WN++I ++ +ALE+++RM + P++ T V+
Sbjct: 196 GSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVV 255
Query: 250 NSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
++CA L G IHA+V+K N D+ +G+ALVD YAKC + A F +S +N+
Sbjct: 256 SACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNV 315
Query: 309 VSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRM 367
VS +++ GYA +S + F+ ++ Q + ++ + L+L L+ R
Sbjct: 316 VSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRE 375
Query: 368 GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
Y G+L+ S + N + +Y + G + ++
Sbjct: 376 SIWPTHYTFGNLLKS---------------------DIFVGNSLIDMYMKCGSIEDGSRV 414
Query: 428 LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNL 487
+++ D VSWN +I A NG E L++F+ M PD+ T + +L ACS +
Sbjct: 415 FEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLV 474
Query: 488 ALGSSL------HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVIT 540
G HGLI D + C ++D+ G+ G + + + M + + +
Sbjct: 475 EEGRHYFFSMEEHGLIPL-----KDHYTC--MVDLLGRAGCLNEAKNLIEAMPVNPDAVV 527
Query: 541 WTALISALGLNG---FAQRALEKFREMEFLGFKP 571
W +L++A ++G + A EK E++ P
Sbjct: 528 WGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGP 561
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 227/463 (49%), Gaps = 41/463 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+ + S+NS++S +++ E++L F+ M F +++FG LS C L + G
Sbjct: 107 MPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMG 166
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A V K+ + D ++G+AL+ +Y + G + VF M ++LVTWNS+++ + +
Sbjct: 167 TQVHALVSKS-RYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQ 225
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELL 177
+G + + +F ++ S + E + V+ ++ L+ G QIH V+K N F +L+
Sbjct: 226 NGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLV 285
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV-D 236
+ N+LV+MY +C+ + A ++F + IR+VVS +++ A + + A ++ +M+ +
Sbjct: 286 LGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRN 345
Query: 237 IVFPNQTTFVYVIN----SCAGLQNSILGKSIHAK--VIKNALECDVFVGSALVDFYAKC 290
+V N Y N L + +SI N L+ D+FVG++L+D Y KC
Sbjct: 346 VVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKC 405
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL 349
++E F ++ ++ VSWNA+I+GYA ++ + ++L G +P+ T VL
Sbjct: 406 GSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVL 465
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ L++ E Y S + GLI + ++
Sbjct: 466 CACSHAGLVE----------EGRHYFF-----SMEEHGLIPLKDHYTCMVD--------- 501
Query: 410 IIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
+ R G NE L+ + PD V W ++AAC +G+
Sbjct: 502 ----LLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGN 540
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/495 (33%), Positives = 257/495 (51%), Gaps = 19/495 (3%)
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
N F Y N+L++ + + A +F + D S+N +I ALA+ AL
Sbjct: 825 NTFSY-----NALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLF 879
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
M D N +F +++CA ++S G +HA V K+ DV++GSAL+D YAK
Sbjct: 880 LAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAK 939
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT--SIFLLIELLQLGYRPNEFTFSH 347
C+ E A F + +NIVSWN+LI Y ++ P ++ L + +++ G+ P+E T +
Sbjct: 940 CEWPEEARRVFEAMPERNIVSWNSLITCY-EQNGPVGEALVLFVSMMKAGFVPDEVTLAS 998
Query: 348 VLRSSLAF----QLLQLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIP 402
V+ + + Q+H +++ + VL +L+ YAK G A +
Sbjct: 999 VMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASR 1058
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
V ++I G Y R+ + + SQ+ ++++WN++IAA A NG+ +E L LF +
Sbjct: 1059 SVVSETSLITG-YARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRL 1117
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI-----ISSDTFVCNMLIDMY 517
+ ++P +YT+ ++L+AC + +L LG H + K SD FV N L+DMY
Sbjct: 1118 KRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMY 1177
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
K GSI K+F M R+ ++W A+I NG A+ AL F M PD V +I
Sbjct: 1178 LKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMI 1237
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
VL+AC H GLV EG F M +G+ P DHY C++DLL R GHLKE E++I M
Sbjct: 1238 GVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSM 1297
Query: 638 PPNALIWRTFLEGCQ 652
P+A++W + L C+
Sbjct: 1298 EPDAVLWASLLGSCR 1312
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 146/601 (24%), Positives = 258/601 (42%), Gaps = 71/601 (11%)
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI 148
G + + +F+ MP + +WN+I++ + G + + LF + + +++ V+
Sbjct: 99 GSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVL 158
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
+ DL Q+HG + K F +++ +LV++Y C + A + F D+ + +
Sbjct: 159 SCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAI 218
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SWN I+ + A++++ RM V P T + + +C G+ IHA V
Sbjct: 219 SWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFV 278
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAH------------------------------- 297
+++ E V V S++VD YAKC ++ A
Sbjct: 279 LRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAK 338
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVLRSSLAFQ 356
F + +N+VSWNA++ GY T LL + ++ R + T VL +
Sbjct: 339 RVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGIL 398
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ ++H I+ G+ + + +L+ Y+K G + A
Sbjct: 399 DIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSA-------------------- 438
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
E + L D SWN +I+ + + L M+ + + P+
Sbjct: 439 ----------ERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQ-SEVTPNQS 487
Query: 473 TFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF S L+AC+ + L G +H +I+K I D + ++LIDMY KC S++IF
Sbjct: 488 TFSSALAACANIFLLKQGMQIHAYMIRKGYEI--DDILRSVLIDMYCKCRQFDYSIRIFE 545
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
R+VI W ++I +G + L+ F EM+ G K D V + L +C G VR
Sbjct: 546 ARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRL 605
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G F M + P ++HY C+++LL ++G + E E + MPF P +W + C
Sbjct: 606 GRSYFTLM-MDESIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCC 664
Query: 652 Q 652
+
Sbjct: 665 R 665
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/584 (24%), Positives = 258/584 (44%), Gaps = 108/584 (18%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKN 68
N+++SAY+R G + DA R+F + + P F++ LLS
Sbjct: 798 LNTLVSAYARLGRLPDARRVFDEIPH----PNTFSYNALLSA------------------ 835
Query: 69 GLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFL 128
+ R G + ++F +P ++N++++ +H D +
Sbjct: 836 ----------------HARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLF 879
Query: 129 FCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
+ + L SF + + E+D G Q+H LV K+ ++ + ++L++MY +
Sbjct: 880 LAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAK 939
Query: 189 CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYV 248
C A ++F+ + R++VSWN++I ++ G+AL L++ M P++ T V
Sbjct: 940 CEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASV 999
Query: 249 INSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCD---------------- 291
+++CAGL G+ +HA+V+K + D+ + +ALVD YAKC
Sbjct: 1000 MSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRS 1059
Query: 292 ---------------NLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQ 335
N+E A + FS++ KN+++WN LI YA ++ L + L +
Sbjct: 1060 VVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKR 1119
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
P +T+ +VL + LQL G + + +VL K G D
Sbjct: 1120 ESVWPTHYTYGNVLNACGNVADLQL-------GQQAHVHVL--------KEGFRFD---- 1160
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
V N + +Y +TG ++ K+ ++ D VSWN +I A NG K+
Sbjct: 1161 ---FGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDA 1217
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTF 508
L LF+ M ++ PD+ T + +LSAC + G + HG+I S D +
Sbjct: 1218 LHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIP-----SQDHY 1272
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLN 551
C +ID+ G+ G + ++ EM+ + + + W +L+ + L+
Sbjct: 1273 TC--MIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLH 1314
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 145/561 (25%), Positives = 255/561 (45%), Gaps = 75/561 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
MP R+ S+N+II+A SR G+ +AL +F M + G P T +LSC + L+
Sbjct: 111 MPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCAECLDLCGA 170
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL + K F ++ +GTAL+ +YG L + F+D+ + ++WN IV +
Sbjct: 171 RQLHGHIAKRD-FQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHL 229
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + +F ++ + V + + + LE G IH V+++G+++ + V
Sbjct: 230 AGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHV 289
Query: 179 ANSLVNMYFQCAG-------------------------------IWSAEKMFKDVEIRDV 207
+S+V+MY +C I A+++F+ ++ R++
Sbjct: 290 RSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNL 349
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
VSWN ++ S + AL L+ +M + + T V+++C G+ + G+ +HA
Sbjct: 350 VSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAF 409
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAH--LCFSEISNKNIVSWNALILGYASKSSPT 325
IK + +ALV Y+KC L A L F S ++ SWN+LI GY S
Sbjct: 410 AIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSE 469
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSS----LAFQLLQLHCLIIRMGYENYEYVLGSLMT 381
+ + +Q PN+ TFS L + L Q +Q+H +IR GYE
Sbjct: 470 AALYALTKMQSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYE----------- 518
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
I D L +++ +Y + Q++ ++++ D++ WN
Sbjct: 519 -------IDDIL--------------RSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNS 557
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I CA++G + L+LF M+ I D+ TF+ L +C ++ LG S L+
Sbjct: 558 MIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDES 617
Query: 502 IISS-DTFVCNMLIDMYGKCG 521
II + + C +I++ GK G
Sbjct: 618 IIPRIEHYEC--MIELLGKHG 636
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 228/479 (47%), Gaps = 12/479 (2%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N + C + A ++F + +RD SWN II A + + + +AL L+ M+ +
Sbjct: 89 NRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIR 148
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P T V++ CA + + +H + K + +V +G+ALVD Y C L A
Sbjct: 149 PKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRA 208
Query: 300 FSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F +I N +SWN ++ Y + ++ + +L G RP +T SH + + L
Sbjct: 209 FDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNAL 268
Query: 359 Q----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+ +H ++R GYE++ +V S++ YAK G + A + + V+ +I++G+
Sbjct: 269 EEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGL 328
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+ G+ + ++ ++ ++VSWN ++ + D L LF+ MR D T
Sbjct: 329 AS-CGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITL 387
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK--IFNE 532
S+LSAC+ + ++ G +H K SS + N L+ MY KCG + S+ + +F
Sbjct: 388 GSVLSACTGILDIGKGEEVHAFAIKCGFFSS-PILKNALVRMYSKCGCLRSAERLLLFEM 446
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
++R+ +W +LIS + ++ AL +M+ P++ + L AC + L+++G
Sbjct: 447 GSERDSYSWNSLISGYERHSMSEAALYALTKMQS-EVTPNQSTFSSALAACANIFLLKQG 505
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
M++ M R G E + ++D+ + + +I P + ++W + + GC
Sbjct: 506 MQIHAYMIRK-GYEIDDILRSVLIDMYCKCRQFDYSIRIFEARP-SRDVILWNSMIFGC 562
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 223/492 (45%), Gaps = 78/492 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
+PD + S+N++I+A ++ DAL M F ++F LS + G
Sbjct: 852 IPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTG 911
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A V K+ D ++G+ALL +Y + +E VFE MP +++V+WNS+++ + +
Sbjct: 912 VQVHALVSKSP-HAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQ 970
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELL 177
+G V + + LF ++++ E + V+ + G Q+H V+K + F +++
Sbjct: 971 NGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMV 1030
Query: 178 VANSLVNMYFQC-------------------------------AGIWSAEKMFKDVEIRD 206
++N+LV+MY +C A + A+ +F + ++
Sbjct: 1031 LSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKN 1090
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
V++WN +I A A++ +AL L++R+ + V+P T+ V+N+C + + LG+ H
Sbjct: 1091 VIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHV 1150
Query: 267 KVIKNAL------ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
V+K E DVFVG++LVD Y K +++ F ++ ++ VSWNA+I+G+A
Sbjct: 1151 HVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQ 1210
Query: 321 KSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
L E +L P+ T VL
Sbjct: 1211 NGRAKDALHLFERMLCSKESPDSVTMIGVL------------------------------ 1240
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPAN----IIAGIYNRTGQYNETVKLLSQLE-RP 434
++ SGL+ + + ++ ++P+ + + R G E +L+ ++ P
Sbjct: 1241 -SACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEP 1299
Query: 435 DIVSWNIVIAAC 446
D V W ++ +C
Sbjct: 1300 DAVLWASLLGSC 1311
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 156/666 (23%), Positives = 279/666 (41%), Gaps = 103/666 (15%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-GAQLQ 62
N +S+N I+ Y G + A+ MF M++ G P +T +L+C N +E G +
Sbjct: 216 NAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIH 275
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS-------------------------- 96
A VL++G + V ++++ +Y + G +D S
Sbjct: 276 AFVLRHG-YEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRI 334
Query: 97 -----VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
VFE M ++LV+WN++++ + + + + LF ++ + + V+
Sbjct: 335 ADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSAC 394
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEK--MFKDVEIRDVVS 209
+ D+ GE++H IK GF ++ N+LV MY +C + SAE+ +F+ RD S
Sbjct: 395 TGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYS 454
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
WN++I AL +M ++ PNQ+TF + +CA + G IHA +I
Sbjct: 455 WNSLISGYERHSMSEAALYALTKMQSEVT-PNQSTFSSALAACANIFLLKQGMQIHAYMI 513
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIF 328
+ E D + S L+D Y KC + + F +++++ WN++I G A S +
Sbjct: 514 RKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLD 573
Query: 329 LLIELLQLGYRPNEFTF----------SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS 378
L E+ + G + + TF HV F L+ +I R+ E+YE ++
Sbjct: 574 LFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDESIIPRI--EHYECMIEL 631
Query: 379 LMTSYAKSGLISDALAFV--------TAL------------------------NIPRAVV 406
L K G + + FV TA+ N +
Sbjct: 632 L----GKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLT 687
Query: 407 PANIIAGI---YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
P +A + N G+ E+ S+ E + + +++ A L +
Sbjct: 688 PVQFVATVDYESNDGGREAESTSFSSEGEGCEELPFSLEGEASGSLPAPLTTRPLAIWYG 747
Query: 464 AARIYPDNYTFVSLLSACSKLC-------NLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
AR + ++ FVS L A + L NL + H K+ + ++TF+ N L+
Sbjct: 748 MARHH--HHHFVSHLRASAPLADLLRSAPNLPAARAAHARALKSPFV-AETFLLNTLVSA 804
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y + G + + ++F+E+ N ++ AL+SA G A F + PD+ +
Sbjct: 805 YARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIP----DPDQCSY 860
Query: 577 IAVLTA 582
AV+ A
Sbjct: 861 NAVIAA 866
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 174/426 (40%), Gaps = 49/426 (11%)
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
+K+ + F+ + LV YA+ L A F EI + N S+NAL+ +A P
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
L + P++ +++ V+ ++LA L+ ++VL + + A S
Sbjct: 847 ALFHAIP---DPDQCSYNAVI-AALAQHSRGADALLFLAAMHADDFVLNAYSFASALSAC 902
Query: 389 ISD--------ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
++ A V+ + V + + +Y + E ++ + +IVSWN
Sbjct: 903 AAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWN 962
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
+I NG E L LF M A PD T S++SAC+ L G +H + K+
Sbjct: 963 SLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKS 1022
Query: 501 EIISSDTFVCNMLIDMYGKCG-------------------------------SIGSSVKI 529
+ D + N L+DMY KCG ++ + +
Sbjct: 1023 DRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMV 1082
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F++M ++NVI W LI+A NG + AL F ++ P VL AC + +
Sbjct: 1083 FSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADL 1142
Query: 590 REGME-----LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
+ G + L E +G E ++ + +VD+ ++ G + + K+ M N + W
Sbjct: 1143 QLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDN-VSW 1201
Query: 645 RTFLEG 650
+ G
Sbjct: 1202 NAMIVG 1207
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 128/250 (51%), Gaps = 16/250 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M ++NV+++N +I+AY++ G E+ALR+F+ + PT +T+G +L +C ++ ++ G
Sbjct: 1086 MVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLG 1145
Query: 59 AQLQASVLKNGLFC-----ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
Q VLK G +D FVG +L+ +Y + G +D+ VFE M + V+WN+++
Sbjct: 1146 QQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMI 1205
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ-IHGLVIKNGF 172
++G +D + LF ++ S+ + + +GV+ + +E G + + +G
Sbjct: 1206 VGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGI 1265
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENF-------G 224
++++ + + E++ K++ + D V W +++G+ +N G
Sbjct: 1266 IPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAG 1325
Query: 225 KALELYLRMS 234
K EL R S
Sbjct: 1326 KLFELDPRNS 1335
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 176/405 (43%), Gaps = 53/405 (13%)
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQ 335
F+ + ++ A C ++ A F + ++ SWNA+I + P+ ++ L +
Sbjct: 85 TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNS 144
Query: 336 LGYRPNEFTFSHVLRSSLAFQLL------QLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
LG RP + T + VL S + L QLH I + +++ + +L+ Y L+
Sbjct: 145 LGIRPKDATMASVL--SCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLL 202
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV----KLLSQLERPDIVSWNIVIAA 445
+DA + P A + N+I Y+ G + V ++LS RP + + + A
Sbjct: 203 ADARRAFDDILEPNA-ISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLA 261
Query: 446 CAHNGDYKE-------VL----ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
C N +E VL E ++R++ + D Y + A L NLA +
Sbjct: 262 CRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVV--DMYAKCGAMDAAQSLFNLA---PMK 316
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL----ISALGL 550
++ T I+S CG I + ++F M +RN+++W A+ I ++ L
Sbjct: 317 DMVMSTSIVSG-----------LASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDL 365
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE-RMNRSYGVEPEM 609
G AL F++M + D + L +VL+AC + +G E+ + + P +
Sbjct: 366 TG----ALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPIL 421
Query: 610 DHYHCVVDLLVRYGHLKEAEKIIT-TMPFPPNALIWRTFLEGCQR 653
+ +V + + G L+ AE+++ M ++ W + + G +R
Sbjct: 422 K--NALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYER 464
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEGAQ 60
P R+V+ +NS+I + G E L +F M +G + TF G L+SC S V +
Sbjct: 548 PSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGR 607
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP 102
+++ + ++ L G+HGC+ E+ E MP
Sbjct: 608 SYFTLMMDESIIPRIEHYECMIELLGKHGCMVELEDFVEHMP 649
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 183/665 (27%), Positives = 327/665 (49%), Gaps = 50/665 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM---INRGFEPTQFTFGGLL-SCDSLNPV 56
MP R V S+N+++ AY G +A+R++ M G P T +L +C +
Sbjct: 121 MPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDG 180
Query: 57 E-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR--KSLVTWNSIV 113
G ++ +K GL V AL+G+Y + G LD + VFE + + + + +WNS+V
Sbjct: 181 RCGGEVHGLAVKVGLD-KSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVV 239
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
S ++G + + LF + + + + V V+ + L G ++H ++K G +
Sbjct: 240 SGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSE 299
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ N+L+ MY + + SA ++F + +D +SWN+++ ++ + +A++ + M
Sbjct: 300 LNIQC-NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEM 358
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
P+ V + ++ L G+ HA IK L D+ VG+ L+D Y KC ++
Sbjct: 359 LQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSI 418
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSS 352
E + F + ++ +SW ++ +A S + ++ +++EL + G + +L +
Sbjct: 419 ECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETC 478
Query: 353 LAFQ----LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ L Q+HC IR G + ++
Sbjct: 479 CGLKSISLLKQVHCYAIRNGLLD---------------------------------LILE 505
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N + IY G+++ ++ L ++E+ DIVSW +I C +NG + LF M+ A I
Sbjct: 506 NRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQ 565
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD+ VS+L A + L +L G +HG LI++ I V + L+DMY CGS+ ++
Sbjct: 566 PDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGP--VVSSLVDMYSGCGSMNYAI 623
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
++F ++V+ WTA+I+A G++G ++A++ F+ M G PD V+ +A+L AC H
Sbjct: 624 RVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSK 683
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
LV EG + M Y ++P +HY CVVD+L R G +EA + I TMP P + +W
Sbjct: 684 LVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCAL 743
Query: 648 LEGCQ 652
L C+
Sbjct: 744 LGACR 748
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 154/571 (26%), Positives = 268/571 (46%), Gaps = 43/571 (7%)
Query: 23 EDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVLKNGLFCAD--AFVG 78
E LR L + P + +G +L EG Q+ A + G D F+
Sbjct: 39 EGDLRQALRQLTTRAPPAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLA 98
Query: 79 TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEV- 137
T L+ +YGR G +D+ +F MP +++ +WN++V + G + M ++ + S
Sbjct: 99 TKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAP 158
Query: 138 --ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
A + V+ E D G ++HGL +K G D LVAN+L+ MY +C + SA
Sbjct: 159 GSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSA 218
Query: 196 EKMFK--DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP-NQTTFVYVINSC 252
++F+ + RDV SWN+++ ++ +AL L+ M FP N T V V+ C
Sbjct: 219 LRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQ-SAGFPMNSYTSVAVLQVC 277
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
A L LG+ +HA ++K E ++ + LV YAK ++ A F +I+ K+ +SWN
Sbjct: 278 AELGLLSLGRELHAALLKCGSELNIQCNALLV-MYAKYGRVDSALRVFGQIAEKDYISWN 336
Query: 313 ALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYEN 371
+++ Y S +I E+LQ G++P+ H SL+ L L L G E
Sbjct: 337 SMLSCYVQNSFYAEAIDFFGEMLQHGFQPD-----HACVVSLSSALGHLSRL--NNGREF 389
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
+ Y + + + + G N + +Y + G + K+ +
Sbjct: 390 HAYAIKQRLHTDLQVG---------------------NTLMDMYIKCGSIECSAKVFESM 428
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
D +SW ++A A + + E LE+ ++ I D+ S+L C L +++L
Sbjct: 429 GIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLK 488
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H + ++ D + N LID+YG+CG S+ +F + +++++WT++I+ N
Sbjct: 489 QVHCYAIRNGLL--DLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNN 546
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
G A+ F EM+ +PD VAL+++L A
Sbjct: 547 GRLNGAVFLFTEMQKANIQPDSVALVSILVA 577
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 145/579 (25%), Positives = 266/579 (45%), Gaps = 58/579 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
R+V S+NS++S + G +AL +F M + GF +T +L C L + G +L
Sbjct: 230 RDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGREL 289
Query: 62 QASVLKNG----LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
A++LK G + C ALL +Y ++G +D + VF + K ++WNS++S +
Sbjct: 290 HAALLKCGSELNIQC------NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYV 343
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ F + + F E+++ + V + L + L G + H IK +L
Sbjct: 344 QNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQ 403
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+L++MY +C I + K+F+ + IRD +SW TI+ A+S +ALE+ L + +
Sbjct: 404 VGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEG 463
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ + ++ +C GL++ L K +H I+N L D+ + + L+D Y +C + +
Sbjct: 464 IMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILENRLIDIYGECGEFDHSL 522
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + K+IVSW ++I + ++FL E+ + +P+ +L +
Sbjct: 523 NLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLS 582
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L Q+H +IR + V+ SL+
Sbjct: 583 SLTKGKQVHGFLIRRNFPIEGPVVSSLVD------------------------------- 611
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y+ G N +++ + + D+V W +I A +G K+ ++LFK M + PD+
Sbjct: 612 -MYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHV 670
Query: 473 TFVSLLSACSKLCNLALGSS-LHGLIKKTEIIS-SDTFVCNMLIDMYGKCGSIGSSVKIF 530
+F++LL ACS + G L ++ K + + + C ++D+ G+ G + +
Sbjct: 671 SFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYAC--VVDILGRSGQTEEAYEFI 728
Query: 531 NEMT-DRNVITWTALISALGLN---GFAQRALEKFREME 565
M D W AL+ A ++ G A A K E+E
Sbjct: 729 KTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELE 767
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL---GLNGFAQRALEKFR 562
D F+ L+ MYG+CG + + ++FN M R V +W AL+ A G G A R R
Sbjct: 94 DGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMR 153
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
G PD L +VL AC G R G E+
Sbjct: 154 ASAAPGSAPDGCTLASVLKACGAEGDGRCGGEV 186
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 178/648 (27%), Positives = 326/648 (50%), Gaps = 36/648 (5%)
Query: 8 SFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASV 65
SFN+II+ +S G L + M+ +TF LL +C SLN G L +
Sbjct: 36 SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRI 95
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
L +GL DA++ ++L+ Y + G D VF+ MP +++V W SI+ + + G V +
Sbjct: 96 LVSGL-SLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEA 154
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
LF E+ R + + + + ++ G+S +L + +HG I GF ++ ++NS+++M
Sbjct: 155 FSLFDEMRRQGIQPSSVTMLSLLFGVS---ELAHVQCLHGSAILYGFMSDINLSNSMLSM 211
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C I + K+F ++ RD+VSWN+++ A A+ + L L M + P+ TF
Sbjct: 212 YGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTF 271
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
V++ A LG+ +H ++++ + D V ++L+ Y K N++ A F +
Sbjct: 272 GSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLD 331
Query: 306 KNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
K++V W A+I G S+ ++ + ++L+ G + + T + V+ +
Sbjct: 332 KDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITA------------C 379
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
++G Y LG+ + Y + +P + N + ++ + G +++
Sbjct: 380 AQLG----SYNLGTSVHGY------------MFRHELPMDIATQNSLVTMHAKCGHLDQS 423
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+ ++ + ++VSWN +I A NG + L LF MR+ PD+ T VSLL C+
Sbjct: 424 SIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCAST 483
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
L LG +H + + + V L+DMY KCG + + + FN+M ++++W+A+
Sbjct: 484 GQLHLGKWIHSFVIRNGLRPC-ILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAI 542
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I G +G + AL + + G KP+ V ++VL++C H GLV +G+ ++E M R +G
Sbjct: 543 IVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFG 602
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ P ++H+ CVVDLL R G ++EA + P + L+ C+
Sbjct: 603 IAPNLEHHACVVDLLSRAGRVEEAYNLYKKKFSDPVLDVLGIILDACR 650
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 237/488 (48%), Gaps = 41/488 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP+RNVV + SII YSR G V +A +F M +G +P+ T LL L V+
Sbjct: 130 MPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQC- 188
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
L S + G F +D + ++L +YG+ ++ +F+ M ++ LV+WNS+VS + +
Sbjct: 189 -LHGSAILYG-FMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQI 246
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G++ + + L + +F V+ ++ +L+ G +HG +++ FD + V
Sbjct: 247 GYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVE 306
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
SL+ MY + I A +MF+ +DVV W +I L ++ + KAL ++ +M V
Sbjct: 307 TSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVK 366
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
+ T VI +CA L + LG S+H + ++ L D+ ++LV +AKC +L+ + +
Sbjct: 367 SSTATMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIV 426
Query: 300 FSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F +++ +N+VSWNA+I GYA ++FL E+ P+ T +L+ + L
Sbjct: 427 FDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQL 486
Query: 359 QL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
L H +IR G V SL+ Y K G L+I +
Sbjct: 487 HLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCG----------DLDIAQ----------- 525
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+ +Q+ D+VSW+ +I ++G + L + + + P++ F
Sbjct: 526 -----------RCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGMKPNHVIF 574
Query: 475 VSLLSACS 482
+S+LS+CS
Sbjct: 575 LSVLSSCS 582
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 9/165 (5%)
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
I S+N +I + G +++VL + M + D YTF SLL ACS L +LG SLH
Sbjct: 34 INSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQ 93
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
I + +S D ++ + LI+ Y K G + K+F+ M +RNV+ WT++I G
Sbjct: 94 RILVSG-LSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVP 152
Query: 556 RALEKFREMEFLGFKPDRVALIAVL--------TACRHGGLVREG 592
A F EM G +P V ++++L C HG + G
Sbjct: 153 EAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQCLHGSAILYG 197
>gi|297810955|ref|XP_002873361.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319198|gb|EFH49620.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 849
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 194/677 (28%), Positives = 344/677 (50%), Gaps = 38/677 (5%)
Query: 1 MPDRNVVSFNSIISAYS-RCGYVEDALRMFLYM-INRGFEPTQFTFGGLLSC-----DSL 53
M + V +N +++ S CG + +R F M +P+ TF LL DS
Sbjct: 82 MDSVDPVVWNIVLTGLSVSCG--RETMRFFKAMHFADEPKPSSVTFAILLPVCVRLGDSY 139
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHG-CLDEVVSVFEDMPRKSLVTWNSI 112
N G + + ++K GL D VG AL+ +Y + G + + + F+D+ K +V+WN+I
Sbjct: 140 N---GKSMHSYIIKTGLE-KDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVSWNAI 195
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI---HGLSNEQDLEFGEQIHGLVIK 169
++ F ++ + D FC +++ ++ V+ + G QIH V++
Sbjct: 196 IAGFSENKMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMGKNIAYRSGRQIHSYVVQ 255
Query: 170 NGF-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
+ + V NSLV+ Y + I A +F + +D+VSWN +I A + + KAL+
Sbjct: 256 RSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNHEWLKALQ 315
Query: 229 LY--LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVD 285
L+ L D+ + T + ++ CA L + GK IH+ +++++ L D VG+AL+
Sbjct: 316 LFHNLVQKGDVSL-DSVTILSILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNALIS 374
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTF 345
FYA+ + A+ FS +S K+I+SWNA++ +A SP F + LL +
Sbjct: 375 FYARFGDTSAAYWAFSLMSMKDIISWNAILDAFAD--SPKQ-FQFLNLLHHLFNEAITLD 431
Query: 346 SHVLRSSLAF--------QLLQLHCLIIRMG--YENYEYVLG-SLMTSYAKSGLISDALA 394
S + S L F ++ ++H ++ G + E LG +L+ +YAK G + A
Sbjct: 432 SVTILSLLKFCTNVQGIGKVKEVHGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHK 491
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
L+ R +V N + Y +G +++ L S++ D+ +W++++ A + E
Sbjct: 492 IFQGLSERRTLVTYNSLLSGYVNSGSHDDAQMLFSEMSTTDLTTWSLMVRIYAESCFPNE 551
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
+ +F+ ++A + P+ T ++LL C++L +L L HG I + + D + L+
Sbjct: 552 AIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGRL--GDIRLKGTLL 609
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
D+Y KCGS+ + +F R+++ +TA+++ ++G + AL F M KPD V
Sbjct: 610 DVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIFSHMIDSNIKPDHV 669
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
+ +LTAC H GL+++G+++++ + +G++P M+ Y C VDLL R G L +A IT
Sbjct: 670 FITTLLTACCHAGLIQDGLQIYDSIRAVHGMKPTMEQYACAVDLLARGGRLDDAYSFITQ 729
Query: 635 MPFPPNALIWRTFLEGC 651
MP PNA IW T L C
Sbjct: 730 MPVEPNANIWGTLLRAC 746
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 241/526 (45%), Gaps = 57/526 (10%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
F+ V+ ++ +L G +HG V K G V+ S++NMY +C + +KMF+ ++
Sbjct: 24 FLDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDCQKMFRQMD 83
Query: 204 IRDVVSWNTIIGALA-----ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
D V WN ++ L+ E+ F KA+ D P+ TF ++ C L +S
Sbjct: 84 SVDPVVWNIVLTGLSVSCGRETMRFFKAMHF-----ADEPKPSSVTFAILLPVCVRLGDS 138
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN-LEGAHLCFSEISNKNIVSWNALILG 317
GKS+H+ +IK LE D VG+ALV YAK + A F +I++K++VSWNA+I G
Sbjct: 139 YNGKSMHSYIIKTGLEKDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVSWNAIIAG 198
Query: 318 YASKSSPTSIFL-LIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
++ F +L+ PN T ++VL + MG +N Y
Sbjct: 199 FSENKMMADAFRSFCLMLKEPTEPNYATIANVLP------------VCASMG-KNIAYRS 245
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
G + SY V + V N + Y R G+ E L +++ D+
Sbjct: 246 GRQIHSYV-----------VQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDL 294
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
VSWN+VIA A N ++ + L+LF + + + D+ T +S+L C++L +L G +H
Sbjct: 295 VSWNVVIAGYASNHEWLKALQLFHNLVQKGDVSLDSVTILSILPVCAQLTDLTCGKEIHS 354
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
I + + DT V N LI Y + G ++ F+ M+ +++I+W A++ A +
Sbjct: 355 YILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSMKDIISWNAILDAFADSPKQF 414
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACR-----------HGGLVREGMELFERMNRSYG 604
+ L + D V ++++L C HG V+ G+ E
Sbjct: 415 QFLNLLHHLFNEAITLDSVTILSLLKFCTNVQGIGKVKEVHGYSVKAGLLHNEE------ 468
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
EP++ + ++D + G+++ A KI + + + + L G
Sbjct: 469 -EPKLG--NALLDAYAKCGNVEYAHKIFQGLSERRTLVTYNSLLSG 511
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 4/157 (2%)
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D+ F+ ++ AC+ + L G +LHG + K I+ T V +++MY KC + K+
Sbjct: 20 DHRVFLDVVKACASVSELTSGRALHGCVFKLGHIAC-TEVSKSVLNMYAKCRRMDDCQKM 78
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG-FKPDRVALIAVLTACRHGGL 588
F +M + + W +++ L ++ + + F+ M F KP V +L C G
Sbjct: 79 FRQMDSVDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFAILLPVCVRLGD 137
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G + + ++ G+E + + +V + ++G++
Sbjct: 138 SYNGKSMHSYIIKT-GLEKDTLVGNALVSMYAKFGYI 173
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 174/592 (29%), Positives = 290/592 (48%), Gaps = 38/592 (6%)
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
V + G+ D F LL Y + G L +F+ MP ++ V++ +++ + G E+
Sbjct: 72 VQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEE 131
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ LF L R + ++ L IH K G D V +L++
Sbjct: 132 ALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALID 191
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
Y C + A +F + +D V+W ++ +E++ AL + +M + PN
Sbjct: 192 AYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFV 251
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
+ + L +++LGK IH +K + + VG AL+D YAKC ++E AH F I
Sbjct: 252 LTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIP 311
Query: 305 NKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLR--SSLAFQLL--Q 359
+ +++ W+ LI YA F + + +++ PNEF+ S VL+ +++AF L Q
Sbjct: 312 HDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQ 371
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+H L I++GYE+ +V +LM YAK + ++L
Sbjct: 372 IHNLAIKLGYESELFVGNALMDMYAKCRNMENSL-------------------------- 405
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
++ S L+ + VSWN +I +G ++ L +F MRAA + TF S+L
Sbjct: 406 ------EIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLR 459
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
AC+ ++ +H LI+K+ ++DT VCN LID Y KCG I ++K+F + + +V+
Sbjct: 460 ACANTSSIKHAVQIHSLIEKS-TFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVV 518
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W ++ISA L+G A ALE F M K + V +++L+ C GLV +G+ LF M
Sbjct: 519 SWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSM 578
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ ++P M+HY C+V LL R G L +A K I +P P+ ++WR L C
Sbjct: 579 MMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSC 630
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 173/620 (27%), Positives = 289/620 (46%), Gaps = 51/620 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL----SCDSLNPV 56
MP+RN VSF +++ Y+ G E+AL +F + G E F +L + D+ P
Sbjct: 108 MPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDA--PG 165
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ A K G +AFVGTAL+ Y G + VF+ + K VTW ++VS +
Sbjct: 166 LACGIHACACKLG-HDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCY 224
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ E + F ++ + + G+ IHG +K +D E
Sbjct: 225 SENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEP 284
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V +L++MY +C I A +F+ + DV+ W+ +I A+S +A E++LRM
Sbjct: 285 HVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRS 344
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN+ + V+ +CA + LG+ IH IK E ++FVG+AL+D YAKC N+E +
Sbjct: 345 FVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENS 404
Query: 297 HLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLR----S 351
FS + + N VSWN +I+GY S + ++ + E+ + TFS VLR +
Sbjct: 405 LEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANT 464
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
S +Q+H LI + + N V SL+ +YAK G I DAL
Sbjct: 465 SSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDAL------------------ 506
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
K+ + D+VSWN +I+A A +G LELF M + I ++
Sbjct: 507 --------------KVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKAND 552
Query: 472 YTFVSLLSAC--SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
TFVSLLS C + L N L ++ S + + C ++ + G+ G + ++K
Sbjct: 553 VTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTC--IVRLLGRAGRLTDALKF 610
Query: 530 FNEM-TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
++ + + + W AL+S+ ++ AL ++ + L +P +L+
Sbjct: 611 IGDIPSTPSPMVWRALLSSCVVH--KNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAG 668
Query: 589 VREGMELFERMNRSYGVEPE 608
+ + + L+ + R+ GV+ E
Sbjct: 669 ILDEVALWRKSMRNVGVKKE 688
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 176/412 (42%), Gaps = 43/412 (10%)
Query: 249 INSCAGLQNSILGKSIHAKVIKNA--LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
+ C ++ G+++HA+V++ + D F + L++FYAK L A F + +
Sbjct: 52 LQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPER 111
Query: 307 NIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLI- 364
N VS+ L+ GYA + L LQ G+ N F + +L+ + L C I
Sbjct: 112 NRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIH 171
Query: 365 ---IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
++G++ +V +L+ +Y+ G + A + GI +
Sbjct: 172 ACACKLGHDRNAFVGTALIDAYSLCGAVCHARC---------------VFDGIVGK---- 212
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
D V+W +++ + N + L F MR P+ + S L A
Sbjct: 213 -------------DAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAA 259
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
L + LG +HG KT + ++ V L+DMY KCG I + IF + +VI W
Sbjct: 260 VCLSSALLGKGIHGCSVKT-LYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILW 318
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
+ LIS + ++A E F M P+ +L VL AC + + G E +
Sbjct: 319 SFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELG-EQIHNLAI 377
Query: 602 SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG-CQ 652
G E E+ + ++D+ + +++ + +I +++ N + W T + G CQ
Sbjct: 378 KLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQ-DANEVSWNTIIVGYCQ 428
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
D+Y L C + G ++H ++++ + DTF N+L++ Y K G + ++ +
Sbjct: 44 DSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARR 103
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
+F+ M +RN +++ L+ L G + ALE FR ++ G + + L +L
Sbjct: 104 LFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTIL 155
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 181/615 (29%), Positives = 318/615 (51%), Gaps = 14/615 (2%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVF-EDMPRK- 104
L +C +L +E QL ++LK G+F + + + G H L+ ++ F ED K
Sbjct: 29 LQTCKTL--IELKQLHCNMLKKGVFNINKLIAACVQ--MGTHESLNYALNAFKEDEGTKC 84
Query: 105 SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQI 163
SL T N+++ + G ++ +F++ ++ + ++ +F ++ S G Q+
Sbjct: 85 SLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQV 144
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
HG+V+K G +L VANSL++ Y C + K+F ++ R+VVSW ++I +
Sbjct: 145 HGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMA 204
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
+A+ L+ M V PN T V I++CA L++ LGK + + + ++ + V +AL
Sbjct: 205 KEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNAL 264
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNE 342
+D Y KC ++ F E S+KN+V +N ++ Y + +++ E+LQ G RP++
Sbjct: 265 LDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDK 324
Query: 343 FTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
T + + L + H + R G E + + +++ Y K G A +
Sbjct: 325 VTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDS 384
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
++ V ++IAG+ R G+ +++ ++ ++VSWN +I A ++E ++L
Sbjct: 385 MSNKTVVTWNSLIAGLV-RDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDL 443
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYG 518
+ M+ I D T V + SAC L L L ++ I+K +I D + L+DM+
Sbjct: 444 LREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDI-HIDMQLGTALVDMFS 502
Query: 519 KCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
+CG +++++F M R+V WTA I + G A+ A+E F EM K D +A
Sbjct: 503 RCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVA 562
Query: 579 VLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFP 638
+LTA HGG V +G +LF M + +GV P++ HY C+VDLL R G L+EA ++ +MP
Sbjct: 563 LLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIK 622
Query: 639 PNALIWRTFLEGCQR 653
PN +IW +FL C++
Sbjct: 623 PNDVIWGSFLAACRK 637
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 217/484 (44%), Gaps = 69/484 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M +RNVVS+ S+I+ YS ++A+ +F M+ G EP T +S C L +E
Sbjct: 183 MLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELG 242
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ +++ ++ V ALL +Y + G + V +F++ K+LV +N+I+S + +H
Sbjct: 243 KKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQH 302
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + + + E+++ + + + I + DL G+ H V +NG + ++
Sbjct: 303 GLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNIS 362
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVE--------------IRD-----------------VV 208
N++++MY +C +A K+F + +RD +V
Sbjct: 363 NAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLV 422
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SWNT+IGA+ ++ F +A++L M + ++ T V + ++C L L K I+ +
Sbjct: 423 SWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYI 482
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSI 327
KN + D+ +G+ALVD +++C + A F + +++ +W A I A + ++ +I
Sbjct: 483 EKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAI 542
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
L E+L+ + ++F F +L+T+++ G
Sbjct: 543 ELFDEMLKQDVKADDFVFV-------------------------------ALLTAFSHGG 571
Query: 388 LISDALAFVTALNIPRAVVPANIIAG----IYNRTGQYNETVKLLSQLE-RPDIVSWNIV 442
+ A+ V P + G + R G E L+ + +P+ V W
Sbjct: 572 YVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSF 631
Query: 443 IAAC 446
+AAC
Sbjct: 632 LAAC 635
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 114/226 (50%), Gaps = 5/226 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP+ N+VS+N++I A + E+A+ + M N+G + + T G+ S C L ++ A
Sbjct: 416 MPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLA 475
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + ++ D +GTAL+ ++ R G + VFE+M ++ + W + + +
Sbjct: 476 KWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVE 535
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELLV 178
G + + LF E+++ +V + FV ++ S+ ++ G Q+ + K +G +++
Sbjct: 536 GNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVH 595
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIR--DVVSWNTIIGALAESEN 222
+V++ + + A + K + I+ DV+ W + + A + +N
Sbjct: 596 YGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVI-WGSFLAACRKHKN 640
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 190/673 (28%), Positives = 321/673 (47%), Gaps = 60/673 (8%)
Query: 35 RGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGL-------------------FCADA 75
R PT F L C S+N V Q+ ++ GL + +
Sbjct: 27 RDVSPTHFA-SLLKECRSVNTVR--QIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPK 83
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
+GT ++ Y G + +SV E + V WN +V + G ++ + + C ++R+
Sbjct: 84 SLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRA 143
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
+ + G HGL+ NGF+ + V N+LV MY + + A
Sbjct: 144 GTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDA 203
Query: 196 EKMFKDVE---IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT-------TF 245
+F ++ I DV+SWN+I+ A + N AL+L+ M+ IV T +
Sbjct: 204 SLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTT-IVHEKATNERSDIISI 262
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
V ++ +CA L+ K IH+ I+N D FV +AL+D YAKC +++ A F+ +
Sbjct: 263 VNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEF 322
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVL----RSSLAFQLLQL 360
K++VSWNA++ GY + F L + ++ P + T+S V+ + + L
Sbjct: 323 KDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDT 382
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR----------------A 404
+I G E + SL+++ A G +S + A ++ +
Sbjct: 383 FQQMILYGSEPNSVTIISLLSACASLGALSQGME-THAYSLKKCLLSLDNDFGGDGDGED 441
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPD--IVSWNIVIAACAHNGDYKEVLELFKYM 462
+V N + +Y++ + + + + R + +V+W ++I A GD + L+LF M
Sbjct: 442 LVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEM 501
Query: 463 --RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI-KKTEIISSDTFVCNMLIDMYGK 519
+ + P+ YT +L AC+ L +L +G +H + + E SS FV N LIDMY K
Sbjct: 502 ISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSK 561
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
CG + ++ +F+ M RN ++WT+++S G++G + AL+ F +M+ GF PD ++ + +
Sbjct: 562 CGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVL 621
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
L AC H G+V +G++ F+ M YGV HY CV+DLL R G L +A K I MP P
Sbjct: 622 LYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEP 681
Query: 640 NALIWRTFLEGCQ 652
+A IW L C+
Sbjct: 682 SAAIWVALLSACR 694
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 183/403 (45%), Gaps = 63/403 (15%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-------CDSLNPV- 56
+V+S+NSI++A+ + AL +F M E ++S C SL +
Sbjct: 217 DVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALP 276
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ ++ + ++NG F ADAFV AL+ Y + G + + V+VF M K +V+WN++V+ +
Sbjct: 277 QTKEIHSYAIRNGTF-ADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGY 335
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN-----------EQDLEFGEQIHG 165
+ G LF + + + L ++ VI G + +Q + +G + +
Sbjct: 336 TQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNS 395
Query: 166 LVI-------------KNGFDYE-----------------------LLVANSLVNMYFQC 189
+ I G + L+V N+L++MY +C
Sbjct: 396 VTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKC 455
Query: 190 AGIWSAEKMFKDVEIRD--VVSWNTIIGALAESENFGKALELYLRMSVD--IVFPNQTTF 245
+A +F + R+ VV+W +IG A+ + AL+L+ M V PN T
Sbjct: 456 RSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTI 515
Query: 246 VYVINSCAGLQNSILGKSIHAKVIK-NALECDV-FVGSALVDFYAKCDNLEGAHLCFSEI 303
++ +CA L + +GK IHA V + + E V FV + L+D Y+KC +++ A F +
Sbjct: 516 SCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSM 575
Query: 304 SNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTF 345
+N VSW +++ GY + + +Q G+ P++ +F
Sbjct: 576 PKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISF 618
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 136/269 (50%), Gaps = 21/269 (7%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGAQLQ 62
+V++++++I+ Y++ GY ++AL F MI G EP T LLS C SL + +G +
Sbjct: 359 DVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETH 418
Query: 63 ASVLKNGLFC-----------ADAFVGTALLGLYGRHGCLDEVVSVFEDMPR--KSLVTW 109
A LK L D V AL+ +Y + ++F +PR +++VTW
Sbjct: 419 AYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTW 478
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFV--GVIHGLSNEQDLEFGEQIHGLV 167
++ + ++G D + LF E++ A+ +++ ++ ++ L G+QIH V
Sbjct: 479 TVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYV 538
Query: 168 IKNGFDYE---LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
++ +YE VAN L++MY +C + +A +F + R+ VSW +++
Sbjct: 539 TRH-HEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGK 597
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCA 253
+AL+++ +M P+ +F+ ++ +C+
Sbjct: 598 EALDIFDKMQKAGFVPDDISFLVLLYACS 626
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 96/177 (54%), Gaps = 16/177 (9%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGF--EPTQFTFGG-LLSCDSLNPVE-G 58
+RNVV++ +I Y++ G DAL++F MI++ + P +T L++C L+ + G
Sbjct: 472 ERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMG 531
Query: 59 AQLQASVLKNGLFCADA-FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ A V ++ + + FV L+ +Y + G +D +VF+ MP+++ V+W S++S +G
Sbjct: 532 KQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYG 591
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
HG ++ + +F ++ ++ + SF+ +++ S H ++ G DY
Sbjct: 592 MHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACS-----------HSGMVDQGLDY 637
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP RN VS+ S++S Y G ++AL +F M GF P +F LL +C V+
Sbjct: 575 MPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG 634
Query: 60 QLQASVLKNGL-FCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
++++ A A ++ L R G LD+ ++MP S W +++S
Sbjct: 635 LDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACR 694
Query: 118 KHGFVEDCMFLFCELV 133
H VE + +LV
Sbjct: 695 VHSNVELAEYALNKLV 710
>gi|302763107|ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
gi|300167208|gb|EFJ33813.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
Length = 703
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 195/657 (29%), Positives = 326/657 (49%), Gaps = 37/657 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
+P R++ S+N II+A+++ + A+ MF M + G +P T +L +C SL + EG
Sbjct: 47 LPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEG 106
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ + L GL + V AL+ +Y R LD VF+ + KS+V+WN++++ +
Sbjct: 107 KKIHSRALARGL-SSSIIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACAR 165
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD-LEFGEQIHGLVIKNGFDYELL 177
G E + LF R E+ E +F V + S D E G++IH + + + +
Sbjct: 166 QGEAEQALQLF---KRMELEPNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVT 222
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VA ++V MY + + A ++F ++ ++VVSWN ++GA ++ +ALE+Y M
Sbjct: 223 VATAIVTMYGKFGKVGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQK 282
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V ++ T V + A L+ LG +H + + + ++ V +AL+ Y KC+ L+ A
Sbjct: 283 VQRDEVTVVIALGISASLRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAAR 342
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQ 356
FS++ ++VSW ALI+ Y L + ++ G P++ TF+ VL +
Sbjct: 343 RVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTS 402
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L+L G + +L A+ SD + +N +Y
Sbjct: 403 DLEL-------GQALHARLL-------ARKDGFSDGVLVAALIN-------------MYV 435
Query: 417 RTGQYNETVKLLSQLERPD-IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G+ + + ++ + +V WN +I A G + ++L+ M+ + PD T
Sbjct: 436 KCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLS 495
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+LSAC++L +L G LH I + S + V N LI MY CG I + +F M +
Sbjct: 496 SILSACAELQDLEKGEQLHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKN 555
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
R+V++WT LISA G A+RAL +R M G +P + V AC H GLV E
Sbjct: 556 RDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEPTFLCVFLACGHAGLVDECKWY 615
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+ M + P DHY CVV +L R G L+EAE ++ +MPF P ++ W + L C+
Sbjct: 616 FQSMIEDR-ITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPFNPGSVGWTSLLGACR 671
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 298/586 (50%), Gaps = 43/586 (7%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G ++ A ++ +GL +D F+G LL +YG+ G +D+ + VF +PR+SL +WN I++ F
Sbjct: 4 QGRRIHAHIVASGL-ASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAAF 62
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
K+ + +F + + + ++ V+ S+ +DLE G++IH + G +
Sbjct: 63 AKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSI 122
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+V N+LV+MY +C+ + A +F +E + VVSWN +I A A +AL+L+ RM ++
Sbjct: 123 IVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRMELE 182
Query: 237 IVFPNQTTFVYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
PN+ TF V N+C+ L + +GK IH ++ + LE +V V +A+V Y K +
Sbjct: 183 ---PNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGM 239
Query: 296 AHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F+ I +KN+VSWNA++ Y + ++ + E++ + +E T L S +
Sbjct: 240 ARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISAS 299
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+LL +LH L + GY++ V +L++
Sbjct: 300 LRLLKLGIELHELSVAHGYDSNIKVQNALIS----------------------------- 330
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+Y + + + ++ S++ D+VSW +I A +G +E LEL+K M + PD
Sbjct: 331 ---MYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPD 387
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF S+LSACS +L LG +LH + + SD + LI+MY KCG + S +IF
Sbjct: 388 KVTFTSVLSACSNTSDLELGQALHARLLARKDGFSDGVLVAALINMYVKCGRLDLSSEIF 447
Query: 531 NEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
D + V+ W A+I+A G+++ A++ + M+ G PD L ++L+AC +
Sbjct: 448 QSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELQDL 507
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+G +L + S + ++ + G ++EA+ + M
Sbjct: 508 EKGEQLHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRM 553
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 155/589 (26%), Positives = 285/589 (48%), Gaps = 64/589 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP--VEGAQL 61
++VVS+N++I+A +R G E AL++F M EP + TF + + SL P E +
Sbjct: 151 KSVVSWNAMIAACARQGEAEQALQLFKRM---ELEPNEVTFASVFNACSLLPDHREVGKR 207
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
++ A+ V TA++ +YG+ G + VF + K++V+WN+++ + ++
Sbjct: 208 IHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQVFNGIQHKNVVSWNAMLGAYTQNNL 267
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + ++ E+V +V E + V + ++ + L+ G ++H L + +G+D + V N+
Sbjct: 268 DREALEVYHEMVAQKVQRDEVTVVIALGISASLRLLKLGIELHELSVAHGYDSNIKVQNA 327
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L++MY +C + +A ++F V DVVSW +I A + +ALELY +M + + P+
Sbjct: 328 LISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPD 387
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVI--KNALECDVFVGSALVDFYAKCDNLEGAHLC 299
+ TF V+++C+ + LG+++HA+++ K+ V V +AL++ Y KC L+ +
Sbjct: 388 KVTFTSVLSACSNTSDLELGQALHARLLARKDGFSDGVLV-AALINMYVKCGRLDLSSEI 446
Query: 300 FSEISN-KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + K +V WNA+I Y + S ++ L + Q G P+E T S +L + Q
Sbjct: 447 FQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELQD 506
Query: 358 L----QLHCLII--RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L QLH II R +N VL +L++ YA G I +A A
Sbjct: 507 LEKGEQLHVEIIASRDCSQN-PVVLNALISMYASCGEIREAKA----------------- 548
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+ +++ D+VSW I+I+A GD + L L++ M + P
Sbjct: 549 ---------------VFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTE 593
Query: 472 YTFVSLLSACSKL-----CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
TF+ + AC C S + I T D + C ++ + + G + +
Sbjct: 594 PTFLCVFLACGHAGLVDECKWYFQSMIEDRITPT----FDHYSC--VVTVLSRAGKLEEA 647
Query: 527 VKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFKP 571
+ + M + + WT+L+ A +G A+RA ++ E++ P
Sbjct: 648 EDLLHSMPFNPGSVGWTSLLGACRTHGDLKRARRAADEAMELDRQDSAP 696
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 182/625 (29%), Positives = 316/625 (50%), Gaps = 31/625 (4%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGL----------FCADAFVGTALLGLYGRHGCLDEVVS 96
L C +LN ++ QL + KNGL A A + + Y R +
Sbjct: 32 LRCCKTLNQLK--QLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYAR-----KAFE 84
Query: 97 VFEDMPRK--SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE 154
+F++ R +L NS++ + G + + L+ ++ V +F V+ G +
Sbjct: 85 LFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKI 144
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
G Q+HG V+K G + ++ + N L++ Y +C + K+F+ + R+VVSW ++I
Sbjct: 145 AAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLI 204
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
A + +A+ L+ M + P+ T V VI++CA L++ +G+ + A + + L+
Sbjct: 205 CGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLK 264
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIEL 333
+ + +ALVD Y KC ++ A F E ++N+V +N ++ YA + + ++ +L E+
Sbjct: 265 LNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEM 324
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLLQL------HCLIIRMGYENYEYVLGSLMTSYAKSG 387
LQ G RP+ T + +S QL+ L H +IR G E ++ + ++ Y K G
Sbjct: 325 LQQGPRPDRVTMLSAISASA--QLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCG 382
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
+ V L + VV N + + R G ++ +Q+ + V WN +I+
Sbjct: 383 K-PEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLV 441
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
+++ +ELF+ M+ I D T + + SAC L L +H I+K I D
Sbjct: 442 QKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGI-PCDM 500
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
+ L+DM+ +CG S++++FN+MT+R+V WTA I + + G + A F +M
Sbjct: 501 RLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQ 560
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G KPD V + VLTAC HGG V +G+ +F M +G+ P+++HY C+VDLL R G L+E
Sbjct: 561 GVKPDVVLFVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLRE 619
Query: 628 AEKIITTMPFPPNALIWRTFLEGCQ 652
A +I +MP PN ++W + L C+
Sbjct: 620 AFDLIKSMPMEPNDVVWGSLLAACR 644
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 151/595 (25%), Positives = 279/595 (46%), Gaps = 29/595 (4%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNP-VEGAQ 60
D + NS+I YS G +A+ +++ M+ G P +TF +LS C + EG Q
Sbjct: 93 DDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQ 152
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ SV+K GL D F+ L+ Y G +D VFE M +++V+W S++ + +
Sbjct: 153 VHGSVVKMGLE-EDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGD 211
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
++ + LF E+V + + + + V VI + +DL+ GE++ + + G ++ N
Sbjct: 212 RPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVN 271
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+LV+MY +C I +A+++F + R++V +NTI+ A +AL + M P
Sbjct: 272 ALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRP 331
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
++ T + I++ A L + GK H VI+N LE +G+ ++D Y KC E A F
Sbjct: 332 DRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVF 391
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEF---TFSHVLRSSLAFQL 357
+SNK +VSWN+L G+ S + + Q+ R F S +++ SL
Sbjct: 392 DLMSNKTVVSWNSLTAGFIRNGDVESAWEVFN--QIPERNAVFWNTMISGLVQKSLFEDA 449
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSG-LISDALAFVTALNIPRAVVPANI-----I 411
++ L M E + ++M + G L + LA I + +P ++ +
Sbjct: 450 IE---LFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTAL 506
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++ R G +++ +++ D+ +W I A G+ + LF M + PD
Sbjct: 507 VDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDV 566
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIF 530
FV +L+ACS + G + L++ I + + C ++D+ G+ G + + +
Sbjct: 567 VLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGC--MVDLLGRAGLLREAFDLI 624
Query: 531 NEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFKPDRVALIAVLT 581
M + N + W +L++A ++ A A E+ E+ P R + +L+
Sbjct: 625 KSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINEL-----APQRAGVHVLLS 674
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 215/452 (47%), Gaps = 40/452 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M +RNVVS+ S+I Y+R ++A+ +F M+ G P+ T ++S C L ++ G
Sbjct: 192 MSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMG 251
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ A + + GL V AL+ +Y + G +D +F++ ++LV +N+I+S + +
Sbjct: 252 ERVCAYIGELGLKLNKVMV-NALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYAR 310
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + + E+++ + + I + DL +G+ HG VI+NG + +
Sbjct: 311 QGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSI 370
Query: 179 ANSLVNMYFQC-------------------------------AGIWSAEKMFKDVEIRDV 207
N +++MY +C + SA ++F + R+
Sbjct: 371 GNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNA 430
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
V WNT+I L + F A+EL+ M + + ++ T + + ++C L L K +H
Sbjct: 431 VFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTY 490
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTS 326
+ KN + CD+ + +ALVD +A+C + + A F++++ +++ +W A I A + + +
Sbjct: 491 IEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGA 550
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRS----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTS 382
L ++L G +P+ F VL + Q L + L+ G G ++
Sbjct: 551 TGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDL 610
Query: 383 YAKSGLISDALAFVTALNI-PRAVVPANIIAG 413
++GL+ +A + ++ + P VV +++A
Sbjct: 611 LGRAGLLREAFDLIKSMPMEPNDVVWGSLLAA 642
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 6/226 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+P+RN V +N++IS + EDA+ +F M G + + T G+ S C L E A
Sbjct: 425 IPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELA 484
Query: 60 Q-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + + KNG+ C D + TAL+ ++ R G + VF M + + W + +
Sbjct: 485 KWVHTYIEKNGIPC-DMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAM 543
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E LF +++ V FV V+ S+ +E G I L+ +G ++
Sbjct: 544 EGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEH 603
Query: 179 ANSLVNMYFQCAGIWSAEKMFKD--VEIRDVVSWNTIIGALAESEN 222
+V++ + + A + K +E DVV W +++ A +N
Sbjct: 604 YGCMVDLLGRAGLLREAFDLIKSMPMEPNDVV-WGSLLAACRVHKN 648
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 194/691 (28%), Positives = 339/691 (49%), Gaps = 46/691 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEG--AQ 60
RN+VS+ SIIS ++ G +AL +F M G P + TF ++ +C VE A
Sbjct: 137 RNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINACSHGGLVEQGLAF 196
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIVSIFGKH 119
++ V + + G ++ + GR G L E + E +P + +++ W ++ K+
Sbjct: 197 FKSMVYEYNIDPEIKHFG-CIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGCCSKY 255
Query: 120 GFVE------------------DCMFL---------FCELVRSEVALTESSFVGVIHGLS 152
G VE D L F + ++ L E V V GL+
Sbjct: 256 GEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKV-PGLA 314
Query: 153 -----NEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY-FQCAGIWSAEKMFKDVEIRD 206
+ +E +++H ++ +G + ++ Y Q + + A K+F+ +E
Sbjct: 315 LVVTRSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPT 374
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
WNT++ LA+S+ A+ Y + + P+ TF +V+ +CA G+ +H+
Sbjct: 375 TFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHS 434
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS 326
VIK D+FV ++L+ YA C +L A F E+ K++VSWN+LI GY+ ++
Sbjct: 435 HVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKE 494
Query: 327 IFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY----EYVLGSLMT 381
+ L EL+Q + ++ T V+ + + ++R N+ Y+ +L+
Sbjct: 495 VLALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLID 554
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
Y + G + A + + + V N + Y + G K+ Q+ D++SW+
Sbjct: 555 YYCRIGQLQSAEKVFSQMK-DKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSS 613
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I A + + + LELF+ M+ A++ PD S+LSAC+ L L LG +H +++
Sbjct: 614 MICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNN 673
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
I +DT + N LIDM+ KCG + ++++F EM +++ ++W ++I L NGF AL F
Sbjct: 674 I-KTDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWNSIILGLANNGFEDEALNIF 732
Query: 562 REMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR 621
M G +P+ V + VL AC + LV+EG++ FERM + +EP+M HY CVV +L R
Sbjct: 733 YSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDHFERMKTVHNLEPQMKHYGCVVGILSR 792
Query: 622 YGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G L++A+ I MP P+ ++WR L C+
Sbjct: 793 AGQLEKAKNFINEMPLAPDPVVWRILLGACK 823
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 183/738 (24%), Positives = 322/738 (43%), Gaps = 139/738 (18%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFT----------FGGLLSC 50
MP RNVVS+ +I Y+R +A+ +F +M+ G P++ T GG+L
Sbjct: 32 MPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGISPSEITVLAVVPAISNLGGILM- 90
Query: 51 DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM-PRKSLVTW 109
G L +K G+ +DA VG +L+ LY + G + + VF++M R++LV+W
Sbjct: 91 -------GEMLHGYCVKKGIM-SDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSW 142
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI----HGLSNEQDLEFGEQIHG 165
SI+S F HG + + LF E+ R+ + +F+ VI HG EQ L F
Sbjct: 143 TSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINACSHGGLVEQGLAF---FKS 199
Query: 166 LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIG---ALAESE 221
+V + D E+ +++M + + AE++ + + + +V+ W ++G E E
Sbjct: 200 MVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGCCSKYGEVE 259
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVIN--------SCAGLQNSILG------------ 261
+A ++M D+ + F + N S A +L
Sbjct: 260 MGKRA----IKMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKVPGLAL 315
Query: 262 ------------KSIHAKVIKNALECDVFVGSALVDFYA-KCDNLEGAHLCFSEISNKNI 308
K +HA ++ + L + S ++ YA + +L AH F +I +
Sbjct: 316 VVTRSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTT 375
Query: 309 VSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAF----QLLQLHCL 363
WN L+ G A +P + + Q G +P+ TF VL++ + Q+H
Sbjct: 376 FLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSH 435
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
+I++G+ +V SL+ YA G V A +I
Sbjct: 436 VIKLGFLLDIFVSNSLIHLYAACG------DLVCARSI---------------------- 467
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
++ D+VSWN +I + +KEVL LF+ M+A + D T V ++SAC+
Sbjct: 468 ----FDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTH 523
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
L + ++ + I++ I D ++ N LID Y + G + S+ K+F++M D+N +T A
Sbjct: 524 LGDWSMADCMVRYIERNH-IEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNA 582
Query: 544 LISALGLNG--------FAQ-----------------------RALEKFREMEFLGFKPD 572
+I A G F Q +LE FR+M+ KPD
Sbjct: 583 MIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPD 642
Query: 573 RVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII 632
V + +VL+AC H G + G + + + R+ ++ + + ++D+ + G ++EA ++
Sbjct: 643 AVVIASVLSACAHLGALDLGKWIHDYVRRN-NIKTDTIMENSLIDMFAKCGCMQEALQVF 701
Query: 633 TTMPFPPNALIWRTFLEG 650
T M + L W + + G
Sbjct: 702 TEME-EKDTLSWNSIILG 718
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 147/252 (58%), Gaps = 2/252 (0%)
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
+ VV N++ + G+ L Q+ ++VSW +I Y E + LF++M
Sbjct: 4 KNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHM 63
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
A I P T ++++ A S L + +G LHG K I+S D V N LID+Y K GS
Sbjct: 64 MAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMS-DARVGNSLIDLYAKIGS 122
Query: 523 IGSSVKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ +S+K+F+EM DR N+++WT++IS ++G + ALE F EM G +P+R+ ++V+
Sbjct: 123 VQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVIN 182
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC HGGLV +G+ F+ M Y ++PE+ H+ C++D+L R G L EAE+II +P N
Sbjct: 183 ACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNV 242
Query: 642 LIWRTFLEGCQR 653
++WR L C +
Sbjct: 243 IVWRILLGCCSK 254
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 228/478 (47%), Gaps = 63/478 (13%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVL 66
+N+++ ++ +DA+ + +G +P TF +L + P EG Q+ + V+
Sbjct: 378 WNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVI 437
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K G F D FV +L+ LY G L S+F++M K +V+WNS++ + + ++ +
Sbjct: 438 KLG-FLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVL 496
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
LF + EV + + V VI ++ D + + + +N + ++ + N+L++ Y
Sbjct: 497 ALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYY 556
Query: 187 FQCAGIWSAEKMF---KD----------------------------VEIRDVVSWNTIIG 215
+ + SAEK+F KD + +D++SW+++I
Sbjct: 557 CRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMIC 616
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
A +++ +F +LEL+ +M V P+ V+++CA L LGK IH V +N ++
Sbjct: 617 AYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKT 676
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELL 334
D + ++L+D +AKC ++ A F+E+ K+ +SWN++ILG A+ ++ + +L
Sbjct: 677 DTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWNSIILGLANNGFEDEALNIFYSML 736
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
G RPNE TF VL + +L+Q G +++E +
Sbjct: 737 TEGPRPNEVTFLGVLIACANKRLVQ-------EGLDHFERM------------------- 770
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
T N+ + + GI +R GQ + ++++ PD V W I++ AC +G+
Sbjct: 771 -KTVHNLEPQMKHYGCVVGILSRAGQLEKAKNFINEMPLAPDPVVWRILLGACKTHGN 827
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 129/585 (22%), Positives = 248/585 (42%), Gaps = 86/585 (14%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F+ MP +++V+W ++ + + + + LF ++ ++ +E + + V+ +SN
Sbjct: 28 LFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGISPSEITVLAVVPAISNLGG 87
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKD-VEIRDVVSWNTIIG 215
+ GE +HG +K G + V NSL+++Y + + ++ K+F + ++ R++VSW +II
Sbjct: 88 ILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIIS 147
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA--GLQNSILGKSIHAKVIKNAL 273
A +ALEL+ M + PN+ TF+ VIN+C+ GL L + V + +
Sbjct: 148 GFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINACSHGGLVEQGLA-FFKSMVYEYNI 206
Query: 274 ECDVFVGSALVDFYAKCDNL-EGAHLCFSEISNKNIVSWNALILGYASKSSPTSI----F 328
+ ++ ++D + L E + N++ W ++LG SK +
Sbjct: 207 DPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWR-ILLGCCSKYGEVEMGKRAI 265
Query: 329 LLIELLQLGYRPNEFTFSHVL----RSSLAFQLLQL------------------------ 360
+I L+ + S+VL R S A Q +L
Sbjct: 266 KMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKVPGLALVVTRSFVMME 325
Query: 361 -----HCLIIRMGYENYEYVLGSLMTSYA--KSGLISDALAFVTALNIPRAVVPANIIAG 413
H ++ G N +Y + ++ SYA +S L+ F + P + ++ G
Sbjct: 326 AVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVF-EQIESPTTFLWNTLLRG 384
Query: 414 IYNRTGQYNETV---KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ + V K + +PD +++ V+ ACA KE
Sbjct: 385 LAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKE---------------- 428
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
G +H + K + D FV N LI +Y CG + + IF
Sbjct: 429 -------------------GEQMHSHVIKLGFL-LDIFVSNSLIHLYAACGDLVCARSIF 468
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+EM ++V++W +LI + L F M+ + D+V ++ V++AC H G
Sbjct: 469 DEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWS 528
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+ + R++ +E ++ + ++D R G L+ AEK+ + M
Sbjct: 529 MADCMVRYIERNH-IEVDVYLGNTLIDYYCRIGQLQSAEKVFSQM 572
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 187/421 (44%), Gaps = 33/421 (7%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A +F + R+VVSW +I + + +A+ L+ M + P++ T + V+ + +
Sbjct: 25 ARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGISPSEITVLAVVPAISN 84
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE-ISNKNIVSWNA 313
L ++G+ +H +K + D VG++L+D YAK +++ + F E + +N+VSW +
Sbjct: 85 LGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTS 144
Query: 314 LILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY 372
+I G+A S ++ L E+ + G RPN TF V+ + L++ + Y
Sbjct: 145 IISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINACSHGGLVEQGLAFFKSMV--Y 202
Query: 373 EYVL-------GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY---N 422
EY + G ++ ++G + +A + L + V+ I+ G ++ G+
Sbjct: 203 EYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGCCSKYGEVEMGK 262
Query: 423 ETVKLLSQLERP---DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS--- 476
+K++S LER D + V+ D ++ +L + ++ P V+
Sbjct: 263 RAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKV-PGLALVVTRSF 321
Query: 477 -LLSACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
++ A KL + S LH +++I S + L+ + K+F ++
Sbjct: 322 VMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAH----------KVFEQIE 371
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
W L+ L + + A+ +++ + G KPD + VL AC +EG +
Sbjct: 372 SPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQ 431
Query: 595 L 595
+
Sbjct: 432 M 432
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 129/286 (45%), Gaps = 36/286 (12%)
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTF 345
+A +E A L F ++ +N+VSW LI GY ++ L ++ G P+E T
Sbjct: 16 FAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGISPSEITV 75
Query: 346 SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSY-AKSGLISDALAFVTALNIPRA 404
V+ + I +G ++G ++ Y K G++SDA
Sbjct: 76 LAVVPA------------ISNLG----GILMGEMLHGYCVKKGIMSDARV---------- 109
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQ-LERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
N + +Y + G ++K+ + L+R ++VSW +I+ A +G E LELF MR
Sbjct: 110 ---GNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMR 166
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
A I P+ TF+S+++ACS + G + + I + +IDM G+ G +
Sbjct: 167 RAGIRPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRL 226
Query: 524 GSSVKIFNEM-TDRNVITWTALI---SALGLNGFAQRALEKFREME 565
+ +I + + NVI W L+ S G +RA++ ++E
Sbjct: 227 CEAEQIIEGLPVEVNVIVWRILLGCCSKYGEVEMGKRAIKMISDLE 272
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 113/230 (49%), Gaps = 5/230 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+P+++++S++S+I AYS+ + D+L +F M +P +LS C L ++ G
Sbjct: 603 IPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLG 662
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V +N + D + +L+ ++ + GC+ E + VF +M K ++WNSI+
Sbjct: 663 KWIHDYVRRNNIK-TDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWNSIILGLAN 721
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG-EQIHGLVIKNGFDYELL 177
+GF ++ + +F ++ E +F+GV+ +N++ ++ G + + + + ++
Sbjct: 722 NGFEDEALNIFYSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDHFERMKTVHNLEPQMK 781
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKA 226
+V + + + A+ ++ + D V W ++GA N A
Sbjct: 782 HYGCVVGILSRAGQLEKAKNFINEMPLAPDPVVWRILLGACKTHGNVAVA 831
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 185/652 (28%), Positives = 307/652 (47%), Gaps = 72/652 (11%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFT----FGGLLSC-DSLNPVEGAQLQAS 64
N+ + +SR G+ + ++ + P++F L C P G L
Sbjct: 5 NNFLIRFSRRGFSVQSAKLTQEFVGH-VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCE 63
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
+LK G C D F LL +Y + L + +F++MP ++ +++ +++ + + +
Sbjct: 64 ILKRG-GCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLE 122
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ LF L R L F ++ L + E G IH + K G + V +L++
Sbjct: 123 AIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALID 182
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
Y C + A ++F + +D+VSW ++ AE++ F +AL+L+ +M + PN T
Sbjct: 183 AYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFT 242
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
F V +C GL+ +GKS+H +K+ E D++VG AL+D Y K +++ A F EI
Sbjct: 243 FASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIP 302
Query: 305 NKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----Q 359
K+++ W+ +I YA S S ++ + ++ Q PN+FTF+ VL++ + L Q
Sbjct: 303 KKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQ 362
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+HC +I++G + +V +LM YAK G + +++ A P
Sbjct: 363 IHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLF-------AESP------------ 403
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
R D+ WN VI GD ++ L LF M R+ T+ S L
Sbjct: 404 ------------HRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALR 451
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
AC+ L L G +H L KT D V N LIDMY KCGSI + +F+ M ++ +
Sbjct: 452 ACASLAALEPGLQIHSLTVKT-TFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEV 510
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W A+IS ++G A C + GL+ +G F M
Sbjct: 511 SWNAMISGYSMHGLA----------------------------CANAGLLDQGQAYFTSM 542
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ +G+EP ++HY C+V LL R GHL +A K+I +PF P+ ++WR L C
Sbjct: 543 IQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGAC 594
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 248/533 (46%), Gaps = 67/533 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL------SCDSLN 54
MP+RN +SF ++I Y+ +A+ +F+ + G E F F +L C L
Sbjct: 99 MPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGEL- 157
Query: 55 PVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
G + A + K G ++AFVGTAL+ Y G +D VF+ + K +V+W +V+
Sbjct: 158 ---GWGIHACIFKLG-HESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVT 213
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
F ++ ++ + LF ++ +F V + + G+ +HG +K+ ++
Sbjct: 214 CFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYEL 273
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+L V +L+++Y + I A F+++ +DV+ W+ +I A+S+ +A+E++ +M
Sbjct: 274 DLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMR 333
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+V PNQ TF V+ +CA ++ LG IH VIK L DVFV +AL+D YAKC +E
Sbjct: 334 QALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRME 393
Query: 295 GAHLCFSEISNKNIVS-WNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
+ F+E ++N V+ WN +I+G+ ++ L + +L+ + E T+S LR+
Sbjct: 394 NSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRAC 453
Query: 353 LAFQL----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ LQ+H L ++ ++ V +L+ YAK G I DA +N V
Sbjct: 454 ASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWN 513
Query: 409 NIIAG------------------------------------------IYNRTGQYNETVK 426
+I+G + R G ++ VK
Sbjct: 514 AMISGYSMHGLACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVK 573
Query: 427 LLSQLE-RPDIVSWNIVIAACAHNGDY-------KEVLELFKYMRAARIYPDN 471
L+ ++ +P ++ W ++ AC + D + VLE+ +A + N
Sbjct: 574 LIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKATHVLLSN 626
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 169/598 (28%), Positives = 299/598 (50%), Gaps = 42/598 (7%)
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+S + + +G L+ +YGR D VF++MP ++ V+W S+++ ++G
Sbjct: 74 SSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRA 133
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
D + LF ++RS A + + + + D+ G Q+H +K+ +L+V N+L
Sbjct: 134 GDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNAL 193
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF-PN 241
V MY + + +F+ ++ +D++SW +II A+ +AL+++ +M V+ PN
Sbjct: 194 VTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPN 253
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ F +C + + G+ IH IK L+ D++VG +L D YA+ NL+ A + F
Sbjct: 254 EFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFY 313
Query: 302 EISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL-----RSSLAF 355
I ++VSWN+++ Y+ + ++ L E+ G RP+ T +L R +L
Sbjct: 314 RIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYH 373
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L +H ++++G + V SL++ YA+ +S A+
Sbjct: 374 GRL-IHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAM---------------------- 410
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ +++ D+V+WN ++ ACA + +EVL+LF + + D +
Sbjct: 411 ----------DVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLN 460
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-T 534
++LSA ++L + +H K ++ D + N LID Y KCGS+ ++++F M
Sbjct: 461 NVLSASAELGYFEMVKQVHAYAFKAGLVD-DRMLSNTLIDTYAKCGSLDDAMRLFEIMGN 519
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+R+V +W++LI G+A+ AL+ F M LG +P+ V I VLTAC G V EG
Sbjct: 520 NRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCY 579
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ M YG+ P +H C+VDLL R G L EA I MPF P+ ++W+T L +
Sbjct: 580 YYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASK 637
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 159/572 (27%), Positives = 278/572 (48%), Gaps = 46/572 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPV-EG 58
MP RN VS+ S+I+A+ + G DAL +F M+ G QF G + +C L V G
Sbjct: 112 MPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTG 171
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A LK+ +D V AL+ +Y ++G +D+ +FE + K L++W SI++ F +
Sbjct: 172 RQVHAHALKSER-GSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQ 230
Query: 119 HGFVEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
GF + + +F ++ V E F E+GEQIHGL IK D +L
Sbjct: 231 QGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLY 290
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V SL +MY + + SA F +E D+VSWN+I+ A + +AL L+ M
Sbjct: 291 VGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSG 350
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P+ T ++ +C G G+ IH+ ++K L+ DV V ++L+ YA+C +L A
Sbjct: 351 LRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAM 410
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP--NEFTFSHVLRSSLA- 354
F EI ++++V+WN+++ A + P + L LL P + + ++VL +S
Sbjct: 411 DVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKS-EPSLDRISLNNVLSASAEL 469
Query: 355 --FQLL-QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
F+++ Q+H + G + + +L+ +YAK G + DA+ + R
Sbjct: 470 GYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNR-------- 521
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
D+ SW+ +I A G KE L+LF MR+ I P++
Sbjct: 522 -----------------------DVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNH 558
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+ +L+ACS++ + G + +++ I C+ ++D+ + G + + +
Sbjct: 559 VTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFID 618
Query: 532 EMT-DRNVITWTALISALGLNG---FAQRALE 559
+M + ++I W L++A ++ +RA E
Sbjct: 619 QMPFEPDIIMWKTLLAASKMHNDMEMGKRAAE 650
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 175/574 (30%), Positives = 300/574 (52%), Gaps = 31/574 (5%)
Query: 79 TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVA 138
T ++G Y + G L E ++F+ M +++ VTW ++ + ++ + LF E+ R +
Sbjct: 137 TMIMG-YIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGID 195
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
S ++ G + + Q+H VIK G+D L+V+NSL++ Y + + A ++
Sbjct: 196 PDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQL 255
Query: 199 FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
F D+ RD V++N ++ ++ +A+ L+ +M P + TF ++ + L +
Sbjct: 256 FNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDI 315
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
G+ +H V+K +VFV +AL+DFY+K D + A F E+ + +S+N L+ Y
Sbjct: 316 EFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCY 375
Query: 319 A-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLG 377
A + S+ L EL G+ F F+ +L S+A L L +G
Sbjct: 376 AWNGRVKESLELFKELQFTGFDRRNFPFATLL--SIAAISLNLD--------------IG 419
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
+ S +++DA++ ++ N + +Y + G++ E ++ S L V
Sbjct: 420 RQIHSQT---IVTDAIS---------EILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSV 467
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
W +I++ G +++ L+LF M+ A+I D T+ S++ AC+ L +L LG LH I
Sbjct: 468 PWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHI 527
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
+ IS + F + L+DMY KCGSI ++++F EM RN ++W ALISA NG
Sbjct: 528 IGSGYIS-NVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCT 586
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
L F EM G +PD V+L+++L AC H GLV EG++ F+ M R Y + P+ +HY +D
Sbjct: 587 LRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTID 646
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+L R G EAEK++ MPF P+ ++W + L C
Sbjct: 647 MLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSC 680
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 150/587 (25%), Positives = 278/587 (47%), Gaps = 62/587 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC----DSLNPV 56
M R V++ +I Y++ +A +F+ M G +P + LLS DS+N V
Sbjct: 158 MFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEV 217
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
Q+ + V+K G + + V +LL Y + L +F D+P + VT+N++++ +
Sbjct: 218 R--QVHSHVIKLG-YDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGY 274
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
K GF + + LF ++ TE +F ++ D+EFG+Q+HG V+K F + +
Sbjct: 275 SKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNV 334
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VAN+L++ Y + + A K+F ++ D +S+N ++ A + ++LEL+ +
Sbjct: 335 FVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFT 394
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
F +++ A N +G+ IH++ I ++ VG++LVD YAKC A
Sbjct: 395 GFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEA 454
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
+ FS+++ ++ V W A+I Y K + L +E+ + + T++ ++R+ +
Sbjct: 455 NRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASL 514
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L QLH II GY + + +L+ YAK G I DAL
Sbjct: 515 ASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDAL------------------ 556
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++ ++ + VSWN +I+A A NGD L LF+ M + + PD+
Sbjct: 557 --------------QMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDS 602
Query: 472 YTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+ +S+L ACS + G + ++ L+ K E +S IDM + G
Sbjct: 603 VSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYAS-------TIDMLCRGGRFD 655
Query: 525 SSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFL 567
+ K+ +M + + I W++++++ G++ A++A + M+ L
Sbjct: 656 EAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVL 702
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 171/398 (42%), Gaps = 77/398 (19%)
Query: 210 WNTIIGAL-AESENFG-KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
W +I + + +FG K EL L + +I+ P V + + + + A
Sbjct: 38 WTCVICLIFTNAGHFGSKQYELTLSLMNNIIKPCTRNLVTTLTAPKPHLH------VDAS 91
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK---SSP 324
+IK + + + LV + + +L GA F E+ +KNI S N +I+GY S
Sbjct: 92 IIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEA 151
Query: 325 TSIF-----------------------------LLIELLQLGYRPNEFTFSHVLRSSLAF 355
++F L IE+ + G P+ + + +L F
Sbjct: 152 RTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEF 211
Query: 356 ----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
++ Q+H +I++GY++ V SL+ SY K+ S LAF
Sbjct: 212 DSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTR--SLGLAF---------------- 253
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+L + + D V++N ++ + G +E + LF M+ P
Sbjct: 254 --------------QLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTE 299
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+TF ++L+A +L ++ G +HG + K + + FV N L+D Y K + + K+F
Sbjct: 300 FTFAAILTAGIQLDDIEFGQQVHGFVVKCNFV-WNVFVANALLDFYSKHDRVVEASKLFY 358
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
EM + + I++ L++ NG + +LE F+E++F GF
Sbjct: 359 EMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGF 396
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
E+ + F N +I Y K G++ + +F+ M R +TWT LI N + A
Sbjct: 126 EMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGL 185
Query: 561 FREMEFLGFKPDRVALIAVLTA 582
F EM G PD V+L +L+
Sbjct: 186 FIEMGRHGIDPDHVSLATLLSG 207
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 165/519 (31%), Positives = 276/519 (53%), Gaps = 39/519 (7%)
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
L+ S ++ ++ +DL+ G IH +I+NGFD L ++ L+ Y + +A K+
Sbjct: 35 LSSSLYMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKV 94
Query: 199 FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
F + R+VVSW I A++ ++ AL ++ +M V NQ T+ V+ +C GL+
Sbjct: 95 FDRMPERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCL 154
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
G IH + KN ++FV SALVD ++KC N+E A F +S +++VSWNA+I GY
Sbjct: 155 ERGMQIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGY 214
Query: 319 ASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA----FQLLQLHCLIIRMGYENYE 373
A++ + S + ++ G P+ FT VL++S ++ Q+H +II++G+ ++
Sbjct: 215 AAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHI 274
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
+ GSL+ +YAKS + A A L + +
Sbjct: 275 DLNGSLIDAYAKSEGMKSASA--------------------------------LYKSMLK 302
Query: 434 PDIVSWNIVIAACAHNGDY-KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
D++S+ ++ A Y +E L+LFK M+ + D+ TF ++L+ C+ + +L++G
Sbjct: 303 KDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQ 362
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+H L K + S D N L+DMY K G I + + F EM ++NVI+WT+LI+ G +G
Sbjct: 363 IHALAIKYKP-SYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGKHG 421
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY 612
+ A+ +++ME+ G KP+ + +++L AC H GL EG E F M Y + P +HY
Sbjct: 422 YGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMITKYNILPRAEHY 481
Query: 613 HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
C++DL R G L+EA +I M PN+ +W L C
Sbjct: 482 SCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGAC 520
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 227/457 (49%), Gaps = 43/457 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+RNVVS+ + IS Y++ G+ +DAL +F M G QFT+G +L +C L +E G
Sbjct: 98 MPERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERG 157
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + KN F + FV +AL+ L+ + G +++ +FE M + +V+WN+++ +
Sbjct: 158 MQIHGCIQKN-RFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAA 216
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
F +D +F ++ V + V+ S +L QIHG++I+ GF + +
Sbjct: 217 QDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDL 276
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-ALELYLRMSVDI 237
SL++ Y + G+ SA ++K + +DV+S+ I+ A ++ + AL+L+ M
Sbjct: 277 NGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIF 336
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ + TF ++N CA + + +G+ IHA IK DV G+ALVD YAK +E A
Sbjct: 337 MEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDAT 396
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F E+ KN++SW +LI GY +I L ++ G +PN+ TF
Sbjct: 397 RAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFL---------- 446
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA----FVTALNI-PRAVVPANII 411
SL+ + + SGL + +T NI PRA + +I
Sbjct: 447 ---------------------SLLFACSHSGLTGEGWECFNNMITKYNILPRAEHYSCMI 485
Query: 412 AGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACA 447
++ R GQ E ++ ++ +P+ W ++ AC+
Sbjct: 486 -DLFARGGQLEEAYNMICKMNIKPNSSLWGAILGACS 521
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 129/536 (24%), Positives = 251/536 (46%), Gaps = 48/536 (8%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G + + +++NG F ++ + T L+ Y + G VF+ MP +++V+W + +S +
Sbjct: 55 QGCLIHSHIIRNG-FDSNLHLSTKLIIFYVKFGETINARKVFDRMPERNVVSWTAQISGY 113
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
K+G +D + +F ++ R+ V + ++ V+ + + LE G QIHG + KN F L
Sbjct: 114 AKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQKNRFIGNL 173
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V ++LV+++ +C + A +F+ + RDVVSWN +IG A + + ++ M +
Sbjct: 174 FVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYSMMGE 233
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+ T V+ + + N I IH +I+ + + +L+D YAK + ++ A
Sbjct: 234 GVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAKSEGMKSA 293
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPT--SIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
+ + K+++S+ A++ GYA K S + ++ L ++ + ++ TF +L
Sbjct: 294 SALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCAD 353
Query: 355 FQLL----QLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
L Q+H L I+ +Y+ G +L+ YAKSG I DA
Sbjct: 354 IASLSIGRQIHALAIKYK-PSYDVATGNALVDMYAKSGEIEDA----------------- 395
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ +++ +++SW +I +G E + L+K M + P
Sbjct: 396 ---------------TRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKP 440
Query: 470 DNYTFVSLLSACSKLCNLALG-SSLHGLIKKTEII-SSDTFVCNMLIDMYGKCGSIGSSV 527
++ TF+SLL ACS G + +I K I+ ++ + C +ID++ + G + +
Sbjct: 441 NDITFLSLLFACSHSGLTGEGWECFNNMITKYNILPRAEHYSC--MIDLFARGGQLEEAY 498
Query: 528 KIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ +M + N W A++ A + + +L + L P+ A VL
Sbjct: 499 NMICKMNIKPNSSLWGAILGACSI--YGHMSLGEVAATHLLRMDPENSANYVVLAG 552
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 10/125 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
M ++NV+S+ S+I+ Y + GY +A+ ++ M G +P TF LL S + + EG
Sbjct: 402 MKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEG 461
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM---PRKSLVTWNSIV-- 113
+ +++ A + ++ L+ R G L+E ++ M P SL W +I+
Sbjct: 462 WECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSL--WGAILGA 519
Query: 114 -SIFG 117
SI+G
Sbjct: 520 CSIYG 524
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 165/557 (29%), Positives = 286/557 (51%), Gaps = 31/557 (5%)
Query: 98 FEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL 157
F+++ + + WN +++ K G + LF +++ S V + +F V S+ + +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 158 EFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL 217
GEQ+HG ++K+GF V NSLV Y + + SA K+F ++ RDV+SWN+II
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
+ K L ++++M V + + T V V CA + LG+++H+ +K +
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQL 336
+ L+D Y+KC +L+ A F E+S++++VS+ ++I GYA + + ++ L E+ +
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
G P+ +T + VL ++LL G +E++ + L F
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLD-------EGKRVHEWIK-------------ENDLGF- 279
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
+ +N + +Y + G E + S++ DI+SWN +I + N E L
Sbjct: 280 -------DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEAL 332
Query: 457 ELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
LF + R PD T +L AC+ L G +HG I + S D V N L+D
Sbjct: 333 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS-DRHVANSLVD 391
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY KCG++ + +F+++ +++++WT +I+ G++GF + A+ F +M G + D ++
Sbjct: 392 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 451
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+++L AC H GLV EG F M +EP ++HY C+VD+L R G L +A + I M
Sbjct: 452 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM 511
Query: 636 PFPPNALIWRTFLEGCQ 652
P PP+A IW L GC+
Sbjct: 512 PIPPDATIWGALLCGCR 528
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 156/569 (27%), Positives = 278/569 (48%), Gaps = 45/569 (7%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGL-LSCDSLNPVEGA-QLQASVL 66
+N +++ ++ G ++ +F M++ G E +TF + S SL V G QL +L
Sbjct: 12 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 71
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K+G F VG +L+ Y ++ +D VF++M + +++WNSI++ + +G E +
Sbjct: 72 KSG-FGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGL 130
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
+F +++ S + + ++ V V G ++ + + G +H + +K F E N+L++MY
Sbjct: 131 SVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 190
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+C + SA+ +F+++ R VVS+ ++I A G+A++L+ M + + P+ T
Sbjct: 191 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 250
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
V+N CA + GK +H + +N L D+FV +AL+D YAKC +++ A L FSE+ K
Sbjct: 251 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 310
Query: 307 NIVSWNALILGYASKSSPTSIFLLIELL--QLGYRPNEFTFSHVLRSSLAFQLL----QL 360
+I+SWN +I GY+ L LL + + P+E T + VL + + ++
Sbjct: 311 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 370
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H I+R GY + +V SL+ YAK G A++ A++
Sbjct: 371 HGYIMRNGYFSDRHVANSLVDMYAKCG----------------ALLLAHM---------- 404
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
L + D+VSW ++IA +G KE + LF MR A I D +FVSLL A
Sbjct: 405 ------LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 458
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVI 539
CS + G +++ I ++DM + G + + + M +
Sbjct: 459 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDAT 518
Query: 540 TWTALISALGLN---GFAQRALEKFREME 565
W AL+ ++ A++ EK E+E
Sbjct: 519 IWGALLCGCRIHHDVKLAEKVAEKVFELE 547
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 216/416 (51%), Gaps = 20/416 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
M +R+V+S+NSII+ Y G E L +F+ M+ G E T + + DS G
Sbjct: 105 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 164
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + +K D F T LL +Y + G LD +VF +M +S+V++ S+++ + +
Sbjct: 165 RAVHSIGVKACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 223
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + LF E+ ++ + V++ + + L+ G+++H + +N +++ V
Sbjct: 224 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 283
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY-LRMSVDI 237
+N+L++MY +C + AE +F ++ ++D++SWNTIIG +++ +AL L+ L +
Sbjct: 284 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 343
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P++ T V+ +CA L G+ IH +++N D V ++LVD YAKC L AH
Sbjct: 344 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 403
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----RSS 352
+ F +I++K++VSW +I GY +I L ++ Q G +E +F +L S
Sbjct: 404 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 463
Query: 353 LA------FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
L F +++ C I E+Y ++ L A++G + A F+ + IP
Sbjct: 464 LVDEGWRFFNIMRHECK-IEPTVEHYACIVDML----ARTGDLIKAYRFIENMPIP 514
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 176/597 (29%), Positives = 298/597 (49%), Gaps = 41/597 (6%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
L AS ++ + + L+ +YGR G D VF+ M ++ V+W ++++ ++
Sbjct: 67 HLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQN 126
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
D M LF ++RS + + I S DL G Q+H IK +L+V
Sbjct: 127 SRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIVQ 186
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+LV MY + + +F+ + +D++SW +II LA+ AL+++ M + V
Sbjct: 187 NALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVH 246
Query: 240 -PNQTTFVYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN+ F V +C+ + NS+ G+ IH +K L+ + + G +L D YA+C+ L+ A
Sbjct: 247 HPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSAR 306
Query: 298 LCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F I + ++VSWN+LI +++K ++ L E+ G RP+ T +L + + +
Sbjct: 307 KVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYD 366
Query: 357 LLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L +H ++++G V SL++ YA+ L F +A+++
Sbjct: 367 ALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYAR------CLDFSSAMDV----------- 409
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
++ET D+V+WN ++ AC + ++V +LF + + D
Sbjct: 410 --------FHET-------HDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRI 454
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+ ++LSA ++L + +H K ++ D + N LID Y KCGS+ + K+F
Sbjct: 455 SLNNVLSASAELGYFEMVKQVHAYAFKVGLVG-DAMLSNGLIDTYAKCGSLDDANKLFEI 513
Query: 533 M-TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
M T R+V +W++LI G+A+ AL+ F M LG KP+ V + VLTAC GLV E
Sbjct: 514 MGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDE 573
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
G + M YG+ P +H CV+DLL R G L EA K + MPF P+ ++W+T L
Sbjct: 574 GCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLL 630
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 151/559 (27%), Positives = 269/559 (48%), Gaps = 46/559 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
M DRN VS+ ++I+A+++ DA+ +F M+ G P QF G + +C L + G
Sbjct: 108 MLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLG 167
Query: 59 AQLQASVLK--NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
Q+ A +K +G +D V AL+ +Y + G + + ++FE + K L++W SI++
Sbjct: 168 RQVHAQAIKWESG---SDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGL 224
Query: 117 GKHGFVEDCMFLFCELVRSEVA-LTESSFVGVIHGLSNE-QDLEFGEQIHGLVIKNGFDY 174
+ G D + +F E++ V E F V S LE+GEQIHG+ +K D
Sbjct: 225 AQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDR 284
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
SL +MY +C + SA K+F +E D+VSWN++I A + +A+ L+ M
Sbjct: 285 NSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMR 344
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ P+ T + ++ +C G G+SIH+ ++K L DV V ++L+ YA+C +
Sbjct: 345 DSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFS 404
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVLRSSL 353
A F E ++++V+WN+++ +F L LL + + ++VL +S
Sbjct: 405 SAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASA 464
Query: 354 A---FQLL-QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
F+++ Q+H ++G + L+ +YAK G + DA + R
Sbjct: 465 ELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGR------ 518
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
D+ SW+ +I A G KE L+LF MR + P
Sbjct: 519 -------------------------DVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKP 553
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
++ TFV +L+ACS++ + G + ++K I C+ ++D+ + G + + K
Sbjct: 554 NHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKF 613
Query: 530 FNEMT-DRNVITWTALISA 547
++M + ++I W L++A
Sbjct: 614 VDQMPFEPDIIMWKTLLAA 632
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 222/460 (48%), Gaps = 43/460 (9%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLLSCDSL--NPVE-G 58
D++++S+ SII+ ++ G DAL++F MI G P +F FG + S+ N +E G
Sbjct: 211 DKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYG 270
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K L +++ G +L +Y R LD VF + LV+WNS+++ F
Sbjct: 271 EQIHGVSVKYQLD-RNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSA 329
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + M LF E+ S + + + ++ L G IH ++K G +++V
Sbjct: 330 KGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIV 389
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+NSL++MY +C SA +F + RDVV+WN+I+ A + ++ +L+ + +
Sbjct: 390 SNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMP 449
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
++ + V+++ A L + K +HA K L D + + L+D YAKC +L+ A+
Sbjct: 450 SLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANK 509
Query: 299 CFSEI-SNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + + +++ SW++LI+GYA + ++ L + LG +PN TF VL
Sbjct: 510 LFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVL------- 562
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIA 412
T+ ++ GL+ + + + + +VP + +
Sbjct: 563 ------------------------TACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVL 598
Query: 413 GIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
+ R G+ +E K + Q+ PDI+ W ++AA + D
Sbjct: 599 DLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTHND 638
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 186/652 (28%), Positives = 323/652 (49%), Gaps = 54/652 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQAS 64
+V +NSII Y R G +E+ + F M + G++ EG Q+ +
Sbjct: 123 DVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYK------------------EGKQIHSY 164
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKHGFVE 123
+++N + D F+ TAL+ Y + G E +F+ + R ++V WN ++ FG++G E
Sbjct: 165 IVRN-MLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWE 223
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ + + V + SSF + + + FG+Q+H IK GF+ + V SL+
Sbjct: 224 NSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLL 283
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
MY +C I SAEK+F +V +++ WN +I A + AL +Y +M + V +
Sbjct: 284 TMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSF 343
Query: 244 TFVYVINSC--AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
T + V+ S AGL + LG+ IH +++K L+ + + SAL+ Y+K + A+ FS
Sbjct: 344 TILNVLTSSSMAGLYD--LGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFS 401
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLLQL 360
+ +++V+W ++I G+ ++ +P+ + ++ + + + L
Sbjct: 402 TMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDL 461
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
C I + +V+ KSGL D V A+ + +Y++ G
Sbjct: 462 GCTI-------HGFVI--------KSGLQLD-------------VFVASSLLDMYSKFGF 493
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+ S + ++V+WN +I+ N + LF + +YPD+ +F S+L+A
Sbjct: 494 PERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAA 553
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
S + L G S+HG + + I D V N LIDMY KCG + + IF ++++N++
Sbjct: 554 ISSVAALLKGKSVHGYLVRL-WIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVA 612
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W ++I G +G +A+E F EM G KPD V +++L++C H GL+ EG+ LFE M
Sbjct: 613 WNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMK 672
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+G+EP M+HY +VDL R G L +A + MP P+ IW + L C+
Sbjct: 673 MKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCK 724
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 157/620 (25%), Positives = 293/620 (47%), Gaps = 61/620 (9%)
Query: 40 TQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSV 97
T+FT+ LL +C SL+ ++ G + +S++ GL +D ++ ++L+ +Y + G + V V
Sbjct: 52 TRFTYPSLLKACASLSNLQYGKTIHSSIITTGLH-SDQYITSSLINIYVKCGTFTDAVKV 110
Query: 98 FEDMPRK-----SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS 152
F+ +P+ + WNSI+ + + G +E+ M F G
Sbjct: 111 FDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQF--------------------GRM 150
Query: 153 NEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWN 211
+ G+QIH +++N +++ + +L++ YF+C A +FK ++ R ++V+WN
Sbjct: 151 QSSGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWN 210
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
+IG E+ + +LE YL + V ++F +++C + GK +H IK
Sbjct: 211 VMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKV 270
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI 331
E D +V ++L+ Y KC +E A F+E+ +K I WNALI Y +
Sbjct: 271 GFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIY 330
Query: 332 ELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
+ ++L + FT +VL SS L Y LG L+ + +
Sbjct: 331 KQMKLCTVLSDSFTILNVLTSSSMAGL----------------YDLGRLIHTEIVKRPLQ 374
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
++ +AL +Y++ G N + S ++ D+V+W VI+ N
Sbjct: 375 SSITIQSAL------------LTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNR 422
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
YKE L+ F+ M A + PD+ S++SAC+ L + LG ++HG + K+ + D FV
Sbjct: 423 KYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSG-LQLDVFVA 481
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
+ L+DMY K G + IF++M +N++ W ++IS N ++ F ++
Sbjct: 482 SSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLY 541
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
PD V+ +VL A + +G + + R + + ++ + ++D+ ++ G LK A+
Sbjct: 542 PDSVSFTSVLAAISSVAALLKGKSVHGYLVRLW-IPFDLQVENTLIDMYIKCGLLKYAQH 600
Query: 631 IITTMPFPPNALIWRTFLEG 650
I + N + W + + G
Sbjct: 601 IFERIS-EKNLVAWNSMIGG 619
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/552 (25%), Positives = 267/552 (48%), Gaps = 38/552 (6%)
Query: 1 MPDR-NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE- 57
+ DR N+V++N +I + G E++L +L + +F LS C V
Sbjct: 200 LKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSF 259
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ +K G F D +V T+LL +YG+ ++ VF ++P K + WN+++S +
Sbjct: 260 GKQVHCDAIKVG-FEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYV 318
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G+ D + ++ ++ V + + V+ S + G IH ++K +
Sbjct: 319 GNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSIT 378
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ ++L+ MY + A +F ++ RDVV+W ++I ++ + +AL+ + M D+
Sbjct: 379 IQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADL 438
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ +I++C GL+ LG +IH VIK+ L+ DVFV S+L+D Y+K E A
Sbjct: 439 VKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAG 498
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
FS++ KN+V+WN++I Y + P SI L ++L+ P+ +F+ VL + +
Sbjct: 499 NIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISS-- 556
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
+ +L+ + G ++ L IP + N + +Y
Sbjct: 557 -------------------VAALLKGKSVHG-------YLVRLWIPFDLQVENTLIDMYI 590
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G + ++ ++V+WN +I +G+ + +ELF MR++ I PD+ TF+S
Sbjct: 591 KCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLS 650
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM--- 533
LLS+C+ + G L ++K I ++D+YG+ G +G + M
Sbjct: 651 LLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVE 710
Query: 534 TDRNVITWTALI 545
DR++ W +L+
Sbjct: 711 PDRSI--WLSLL 720
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/538 (24%), Positives = 238/538 (44%), Gaps = 88/538 (16%)
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
+S V T ++ ++ ++ +L++G+ IH +I G + + +SL+N+Y +C
Sbjct: 45 TKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTF 104
Query: 193 WSAEKMFKD-----VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVY 247
A K+F V + DV WN+II + + + RM
Sbjct: 105 TDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRM-------------- 150
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK- 306
+G + GK IH+ +++N L D F+ +AL+D Y KC A F ++ ++
Sbjct: 151 ---QSSGYKE---GKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRS 204
Query: 307 NIVSWNALILGYASK---SSPTSIFLLIELLQLGYRPNEF--TFSHVLRSSLAFQLLQLH 361
NIV+WN +I G+ + +LL + + + F T S + Q+H
Sbjct: 205 NIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVH 264
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
C I++G+E+ YV SL+T Y K +I A
Sbjct: 265 CDAIKVGFEDDPYVHTSLLTMYGKCQMIESA----------------------------- 295
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
K+ +++ +I WN +I+A NG + L ++K M+ + D++T +++L++
Sbjct: 296 ---EKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSS 352
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
S LG +H I K + SS T + + L+ MY K G + IF+ M +R+V+ W
Sbjct: 353 SMAGLYDLGRLIHTEIVKRPLQSSIT-IQSALLTMYSKFGDSNYANSIFSTMKERDVVAW 411
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-----------HGGLVR 590
++IS N + AL+ FR ME KPD + ++++AC HG +++
Sbjct: 412 GSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIK 471
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
G++L + S ++D+ ++G + A I + MP N + W + +
Sbjct: 472 SGLQLDVFVASS------------LLDMYSKFGFPERAGNIFSDMPL-KNLVAWNSII 516
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 194/446 (43%), Gaps = 60/446 (13%)
Query: 214 IGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
I +L + + +AL+LY + V + + T+ ++ +CA L N GK+IH+ +I L
Sbjct: 28 IKSLVQQRQYIEALKLYTKSPV---YTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGL 84
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSE-----ISNKNIVSWNALILGYASKSSPTSIF 328
D ++ S+L++ Y KC A F + +S ++ WN++I GY
Sbjct: 85 HSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGY---------- 134
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
F F + + F +Q GY+ G + SY +
Sbjct: 135 --------------FRFGQLEEGMVQFGRMQ------SSGYKE-----GKQIHSYIVRNM 169
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACA 447
++ TAL Y + G+ E L +L +R +IV+WN++I
Sbjct: 170 LNFDPFLETAL------------IDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFG 217
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
NG ++ LE + + + + +F LSAC + ++ G +H K D
Sbjct: 218 ENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVG-FEDDP 276
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
+V L+ MYGKC I S+ K+FNE+ D+ + W ALISA NG+A AL +++M+
Sbjct: 277 YVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLC 336
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
D ++ VLT+ GL G + + + ++ + ++ + ++G
Sbjct: 337 TVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKR-PLQSSITIQSALLTMYSKFGDSNY 395
Query: 628 AEKIITTMPFPPNALIWRTFLEG-CQ 652
A I +TM + + W + + G CQ
Sbjct: 396 ANSIFSTMK-ERDVVAWGSVISGFCQ 420
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 183/648 (28%), Positives = 322/648 (49%), Gaps = 56/648 (8%)
Query: 48 LSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV 107
LSC +L G +L+ + + ++ Y + G L + +F MPR+ +
Sbjct: 74 LSCGALPDARG------LLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVT 127
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGL 166
+WN+++S + + G D M F + RS +L + +F + E Q+ GL
Sbjct: 128 SWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGL 187
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI---------------------- 204
+ K GF + VA +V+M+ +C + A K F +E
Sbjct: 188 LTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHA 247
Query: 205 ---------RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
RDVVSWN ++ AL++S +AL + + M V + TT+ + +CA L
Sbjct: 248 LELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKL 307
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
+ GK +HA+VI++ D +V SA+V+ YAKC + A FS + ++N VSW LI
Sbjct: 308 SSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLI 367
Query: 316 LG---YASKSSPTSIF--LLIELLQLGYRPNEFTFSHVL-----RSSLAFQLLQLHCLII 365
G Y S +F + EL+ + ++F + ++ R + QLH L +
Sbjct: 368 GGFLQYGCFSESLELFNQMRAELMTV----DQFALATIISGCSNRMDMCLAR-QLHSLSL 422
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
+ G+ + SL++ YAK G + +A + +++ R +V + Y++ G +
Sbjct: 423 KSGHTRAVVISNSLISMYAKCGNLQNAESIFSSME-ERDIVSWTGMLTAYSQVGNIGKAR 481
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKL 484
+ + ++++WN ++ A +G ++ L+++ M + + PD T+V+L C+ +
Sbjct: 482 EFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADM 541
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
LG + G K +I DT V N +I MY KCG I + KIF+ ++ +++++W A+
Sbjct: 542 GANKLGDQITGHTVKVGLIL-DTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAM 600
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I+ +G ++A+E F +M G KPD ++ +AVL++C H GLV+EG F+ + R +
Sbjct: 601 ITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHN 660
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
V P ++H+ C+VDLL R G+L EA+ +I MP P A +W L C+
Sbjct: 661 VSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACK 708
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 240/523 (45%), Gaps = 86/523 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
MP+R+VVS+N ++SA S+ G +AL + + M NRG T+ L +C L+ + G
Sbjct: 254 MPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWG 313
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A V+++ L C D +V +A++ LY + GC E VF + ++ V+W ++ F +
Sbjct: 314 KQLHAQVIRS-LPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQ 372
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + LF ++ + + + + +I G SN D+ Q+H L +K+G +++
Sbjct: 373 YGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVI 432
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV--- 235
+NSL++MY +C + +AE +F +E RD+VSW ++ A ++ N GKA E + MS
Sbjct: 433 SNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNV 492
Query: 236 -----------------------------DIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
V P+ T+V + CA + + LG I
Sbjct: 493 ITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITG 552
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPT 325
+K L D V +A++ Y+KC + A F +S K++VSWNA+I GY+
Sbjct: 553 HTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQ 612
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAK 385
+I + ++L+ G +P+ ++ VL +S +
Sbjct: 613 AIEIFDDMLKKGAKPDYISYVAVL-------------------------------SSCSH 641
Query: 386 SGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWN 440
SGL+ + + L V P + + + R G E L+ ++ +P W
Sbjct: 642 SGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWG 701
Query: 441 IVIAACAHNGDYKEVLELFK-------------YMRAARIYPD 470
+++AC +G+ E+ EL YM A+IY D
Sbjct: 702 ALLSACKTHGN-NELAELAAKHLFDLDSPDSGGYMLLAKIYAD 743
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 148/607 (24%), Positives = 276/607 (45%), Gaps = 71/607 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFG-GLLSCDSLNPVEG 58
MP R+V S+N+++S Y + G DA+ F+ M G P FTFG + SC +L E
Sbjct: 121 MPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEV 180
Query: 59 A-QLQASVLKNGLFCADAFVGTALLGLYGRHGCLD------------------------- 92
A QL + K G F D V T ++ ++ R G +D
Sbjct: 181 ALQLLGLLTKFG-FQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYA 239
Query: 93 ------EVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
+ +FE MP + +V+WN +VS + G + + + ++ V L +++
Sbjct: 240 KSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTS 299
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
+ + L +G+Q+H VI++ + VA+++V +Y +C A ++F + R+
Sbjct: 300 SLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRN 359
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
VSW +IG + F ++LEL+ +M +++ +Q +I+ C+ + L + +H+
Sbjct: 360 TVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHS 419
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY-------- 318
+K+ V + ++L+ YAKC NL+ A FS + ++IVSW ++ Y
Sbjct: 420 LSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGK 479
Query: 319 --------ASKSSPTSIFLLIELLQLGYRPNEFT-FSHVLRSSLAFQLLQLHCLIIRMGY 369
++++ T +L +Q G + +S +L + + R
Sbjct: 480 AREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCA 539
Query: 370 ENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
+ LG +T + K GLI D N + +Y++ G+ +E K+
Sbjct: 540 DMGANKLGDQITGHTVKVGLILDTSVM-------------NAVITMYSKCGRISEARKIF 586
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
L R D+VSWN +I + +G K+ +E+F M PD ++V++LS+CS +
Sbjct: 587 DFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQ 646
Query: 489 LGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI-TWTALI 545
G ++K+ +S + F C ++D+ + G++ + + +EM + W AL+
Sbjct: 647 EGKFYFDMLKRDHNVSPGLEHFSC--MVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALL 704
Query: 546 SALGLNG 552
SA +G
Sbjct: 705 SACKTHG 711
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 192/406 (47%), Gaps = 27/406 (6%)
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
Q T ++ SC L ++ + + E +V + +++ YAK +L A F
Sbjct: 66 QNTLLHAYLSCGALPDA------RGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFG 119
Query: 302 EISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYR-PNEFTFSHVLRSSLAFQL-- 357
+ +++ SWN L+ G Y S ++ + + + G PN FTF ++S A
Sbjct: 120 RMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHE 179
Query: 358 --LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
LQL L+ + G++ V ++ + + G + A + + P +++AG Y
Sbjct: 180 VALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAG-Y 238
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
++ + ++L + D+VSWN++++A + +G +E L + M + D+ T+
Sbjct: 239 AKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYT 298
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S L+AC+KL +L G LH + ++ + D +V + ++++Y KCG + ++F+ + D
Sbjct: 299 SSLTACAKLSSLGWGKQLHAQVIRS-LPCIDPYVASAMVELYAKCGCFKEARRVFSSLRD 357
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
RN ++WT LI G +LE F +M D+ AL +++ C + R M L
Sbjct: 358 RNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSN----RMDMCL 413
Query: 596 FERMNRSYGVEPEMDHYHCVV------DLLVRYGHLKEAEKIITTM 635
++ + + + H VV + + G+L+ AE I ++M
Sbjct: 414 ARQL---HSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSM 456
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 143/324 (44%), Gaps = 39/324 (12%)
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H ++ +G + ++ +L+ +Y G + DA + V+ NI+ Y + G
Sbjct: 51 HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLS 479
++ +L ++ R D+ SWN +++ +G + + +E F M R+ P+ +TF +
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMK 170
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS----------------- 522
+C L + L GL+ K D V ++DM+ +CG+
Sbjct: 171 SCGALGWHEVALQLLGLLTKFG-FQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVF 229
Query: 523 --------------IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+ ++++F M +R+V++W ++SAL +G A+ AL +M G
Sbjct: 230 CRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRG 289
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHLK 626
+ D + LTAC + G +L ++ RS P +D Y +V+L + G K
Sbjct: 290 VRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSL---PCIDPYVASAMVELYAKCGCFK 346
Query: 627 EAEKIITTMPFPPNALIWRTFLEG 650
EA ++ +++ N + W + G
Sbjct: 347 EARRVFSSLR-DRNTVSWTVLIGG 369
>gi|302785790|ref|XP_002974666.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
gi|300157561|gb|EFJ24186.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
Length = 921
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 185/664 (27%), Positives = 322/664 (48%), Gaps = 53/664 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
DR+VV + + I+A G AL +F M G + TF +L+ C +L E G
Sbjct: 263 DRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAACSNLEDFETGKT 322
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
++ + GL D + +L L+ R G L +F+ MP +++VTW ++++ + + G
Sbjct: 323 IEDRIYTLGLE-YDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRG 381
Query: 121 FVEDCMFLF--CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + + L+ ++ ++AL+ V+ S ++LE G +H + F+ L+V
Sbjct: 382 YSMEALELYHCMDIEPDDIALS-----NVLQACSRLKNLEQGRAVHSRIASRDFEPSLMV 436
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-ALELYLRMSVDI 237
LV+MY +C + A + F + RDV+SW ++I A + ENFG+ ALE++ M ++
Sbjct: 437 QTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSH-ENFGREALEVFHSMELEG 495
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN TF VI++C+ L + + G+++H++V+ D FVG+ALV Y+K ++ A
Sbjct: 496 VEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFAR 555
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
+ F I K SW +++ + + L G+RP FS L S A +
Sbjct: 556 VVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALE 615
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
+ + A G+I + + +V +N++ +Y
Sbjct: 616 ---------------------DVSRARAIHGVIKSS-------DFYPDLVLSNVLMNVYA 647
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G+ E + Q+ + VSW +I A NG E LEL+K M + P+ FV
Sbjct: 648 KCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMD---VQPNFIAFVP 704
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
++S+C+ L L G +H + + +++ V L++MY KCG +G + + F+
Sbjct: 705 VISSCADLGALVEGQRVHARLSDAGLQNNEVIV-TALVNMYAKCGKLGLAREFFDSTYCP 763
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+ W ++ +A G + LE +REM G +P+ + L++VL AC H G++ E F
Sbjct: 764 DAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECEHRF 823
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII--------TTMPFPPNALIWRTFL 648
E M +G+ P +HY C+ DLL R G L+EAEK++ + P W +FL
Sbjct: 824 ECMVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFL 883
Query: 649 EGCQ 652
C+
Sbjct: 884 GACK 887
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 163/652 (25%), Positives = 320/652 (49%), Gaps = 51/652 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLLS-CDSLNPVE-GAQ 60
+N S+ ++I+AY++ GY A+ +F M++ G EP T+ G+L+ C +L +E G +
Sbjct: 163 KNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMR 222
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ A + G+ A V T L+ LYG+ G ++ + VFE + + +V W + ++ HG
Sbjct: 223 IHALIRSKGV--ESAMVSTGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHG 280
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ LF ++ + +F ++ SN +D E G+ I + G +Y+ ++ +
Sbjct: 281 QSGFALELFRKMEAEGLQANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQD 340
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+++++ +C + +MF + R VV+W T+I A + +ALELY M ++ P
Sbjct: 341 GILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCMDIE---P 397
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ V+ +C+ L+N G+++H+++ E + V + LVD Y KC +L A F
Sbjct: 398 DDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTF 457
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVL----RSSLAF 355
++++SW +LI Y+ ++ + ++L G PN TF V+ R S
Sbjct: 458 DGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLL 517
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
LH ++ G+ + E+V +L++ Y+K G + A V +IP P
Sbjct: 518 PGRALHSRVVATGHISDEFVGNALVSMYSKFGRVD--FARVVFDSIPVKRYP-------- 567
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
SW +++ A NG E LE++ + P + F
Sbjct: 568 ----------------------SWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFS 605
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
+ L +C+ L +++ ++HG+IK ++ D + N+L+++Y KCG + + +F++MT+
Sbjct: 606 AALVSCTALEDVSRARAIHGVIKSSDFY-PDLVLSNVLMNVYAKCGELEEARLVFDQMTE 664
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+N ++WT +I NG ALE ++ M+ +P+ +A + V+++C G + EG +
Sbjct: 665 KNEVSWTTMIGGYAQNGRPAEALELYKAMD---VQPNFIAFVPVISSCADLGALVEGQRV 721
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
R++ + G++ +V++ + G L A + + + P+A W +
Sbjct: 722 HARLSDA-GLQNNEVIVTALVNMYAKCGKLGLAREFFDST-YCPDAGAWNSM 771
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 162/615 (26%), Positives = 284/615 (46%), Gaps = 51/615 (8%)
Query: 43 TFGGLLS-CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM 101
TF +LS C L +E + ++ + D + ALL LY + G L+E +FE M
Sbjct: 1 TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60
Query: 102 PRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGE 161
R+++ TWN++++ + +H F ++ + F R + + +F V+ + DLE G+
Sbjct: 61 ERRTVATWNTMITAYVQHDFFQEALEAF---RRMDAPPSSITFTSVLGACCSPDDLETGK 117
Query: 162 QIHGLVIKNG--FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
IH + + + ++ NSLV MY +C + AE++F + ++ SW +I A A+
Sbjct: 118 AIHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQ 177
Query: 220 SENFGKALELYLR-MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ +A+E++ MS V P+ T+ V+ +C+ L + G IHA + +E
Sbjct: 178 NGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGVE-SAM 236
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG--YASKSSPTSIFLLIELLQL 336
V + L+D Y K E A F + ++++V W A I Y +S ++ L ++
Sbjct: 237 VSTGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSG-FALELFRKMEAE 295
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
G + N TFS +L + + + I E+ Y LG + G++S
Sbjct: 296 GLQANNVTFSKILAACSNLEDFETGKTI-----EDRIYTLGLEYDDVLQDGILS------ 344
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
++ R G T ++ ++ +V+W +IAA G E L
Sbjct: 345 -----------------LHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEAL 387
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
EL+ M I PD+ ++L ACS+L NL G ++H I + S V +L+DM
Sbjct: 388 ELYHCM---DIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPS-LMVQTLLVDM 443
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y KCG + + + F+ R+VI+WT+LI+A F + ALE F ME G +P+ +
Sbjct: 444 YVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITF 503
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
V+ AC + G L R+ + + E + +V + ++G + A + ++P
Sbjct: 504 CTVIDACSRLSSLLPGRALHSRVVATGHISDEFVG-NALVSMYSKFGRVDFARVVFDSIP 562
Query: 637 ---FPPNALIWRTFL 648
+P WR L
Sbjct: 563 VKRYPS----WRVML 573
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 143/589 (24%), Positives = 256/589 (43%), Gaps = 68/589 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP R VV++ ++I+AY++ GY +AL ++ M EP +L +C L +E
Sbjct: 362 MPHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQG 418
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ S + + F V T L+ +Y + G L E F+ + +++W S+++ +
Sbjct: 419 RAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHE 478
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
F + + +F + V +F VI S L G +H V+ G + V
Sbjct: 479 NFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVG 538
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+LV+MY + + A +F + ++ SW ++ AL ++ + +ALE+Y R+ ++
Sbjct: 539 NALVSMYSKFGRVDFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFR 598
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P F + SC L++ ++IH + + D+ + + L++ YAKC LE A L
Sbjct: 599 PGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLV 658
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL- 358
F +++ KN VSW +I GYA P L + + + +PN F V+ S L
Sbjct: 659 FDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMDV--QPNFIAFVPVISSCADLGALV 716
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
++H + G +N E ++ +L+ YAK G + A F +
Sbjct: 717 EGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYC-------------- 762
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
PD +WN + A A G +VLEL++ M + P+ T +
Sbjct: 763 ------------------PDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLL 804
Query: 476 SLLSACSKLCNLALGS-------SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
S+L ACS + L + HG+ +S+ + C + D+ G+ G + + K
Sbjct: 805 SVLVACSHMGMLEECEHRFECMVADHGIAP-----TSEHYSC--MTDLLGRSGRLEEAEK 857
Query: 529 IFNEMTDRN---------VITWTALISALGLN---GFAQRALEKFREME 565
+ + + V W + + A + G A A EK E++
Sbjct: 858 VVKMASGESGSEAASPVAVSAWMSFLGACKTHNDWGRAAGAAEKLYELD 906
>gi|302820681|ref|XP_002992007.1| hypothetical protein SELMODRAFT_134551 [Selaginella moellendorffii]
gi|300140249|gb|EFJ06975.1| hypothetical protein SELMODRAFT_134551 [Selaginella moellendorffii]
Length = 947
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 186/663 (28%), Positives = 334/663 (50%), Gaps = 50/663 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE-GA 59
+ ++NVVS++ I+A+S+ GY +A+R M G + + TF +L +E G
Sbjct: 290 LDEKNVVSWSGTIAAFSQNGYFWEAIRQLQKMDLEGVQANEVTFVSILDASVWEEIEEGE 349
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGK 118
L++ ++++G + ++ V +L+ +YG+ L VF M RK+ ++W+S+V+ + +
Sbjct: 350 FLRSRIIESG-YGSNVAVCNSLVNMYGKCHSLGNAKEVFWSMEERKNEISWSSLVAAYAQ 408
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + M LF + + + + V+ + + + QIH V++ G + +++V
Sbjct: 409 NNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRASKQSSQIHARVLEAGLERDVVV 468
Query: 179 ANSL---VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
AN+L +NMY +C + A K+F + +D + WN+++ A A+S + +AL+++ M +
Sbjct: 469 ANALTALLNMYARCHSLEDARKVFAGMCRKDAICWNSLLAAYAQSGSGKEALQIFREMDL 528
Query: 236 D---IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ + PN TFV I++CA + G H + + ++ +V V ++L+ Y KC
Sbjct: 529 EGCKSMKPNDVTFVSTIDACANSMDLASGIVFHRRAAEVGMDSNVVVANSLIKMYGKCKR 588
Query: 293 LEGAHLCFSEISN-KNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLR 350
LE A F+ I +++VSWNALI +A ++ +++ G RP+ TF VL
Sbjct: 589 LEEAMSVFNRILGIRDLVSWNALISAFAQNGDGRRALETYWAMIREGVRPDRITFISVLD 648
Query: 351 SSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+ + ++H G+E+ + VLG+L+
Sbjct: 649 ACATLGSIAEGREIHRQASEGGFESVDAVLGTLVN------------------------- 683
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
+Y R G E +L++ D ++WN V AA GD + L + + M
Sbjct: 684 -------MYGRCGNAMEAELAFGKLQQRDAIAWNAVAAAITQTGDQRRALGILRGMDNEG 736
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI-ISSDTFVCNMLIDMYGKCGSIGS 525
+ PDN TF++LL C+ L G H + E+ D + N L++MYGKCGS+
Sbjct: 737 VKPDNVTFITLLDTCADCNALVEGKIFHA--RAMELGFGFDIILGNALLNMYGKCGSLRE 794
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ ++F M RN ++W LI A NG + A+ FR+M+ G P++V+ +++ AC H
Sbjct: 795 ANRVFAAMPVRNSVSWNTLIVAYAQNGHVKLAIGLFRDMDLEGIVPNQVSFLSIFFACSH 854
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
G++ EG + F+ M +G+ P +HY C VDLL R G L +AE+++T M +L W
Sbjct: 855 AGMLEEGSKYFQYMVADHGLVPTPEHYGCFVDLLGRTGRLADAEELVTGMAEDARSLDWL 914
Query: 646 TFL 648
L
Sbjct: 915 ILL 917
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 182/644 (28%), Positives = 316/644 (49%), Gaps = 53/644 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEGA 59
M D NV S+ +++AY++ G+++DAL F M G + T L C S + G
Sbjct: 90 MEDSNVFSWTIMLAAYAQNGHLDDALECFWKMELEGVRANRVTIISALGCCKSFS--RGQ 147
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + + G D + AL+ LYGR +D+ SVF+++ K LV+W +++S F ++
Sbjct: 148 WFHSRIKQEGFLPDDVMIQNALVSLYGRCCEVDQARSVFDEICNKDLVSWTAMISAFVQN 207
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + M F + V +F+ ++ + +D E+IH +I+ G + + +
Sbjct: 208 GHPDRAMVCFWSMQADGVKPCRVTFITILEAVMETRDARVCEEIHLQIIETGLEKDDKLL 267
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N LV Y +C + ++ F+ ++ ++VVSW+ I A +++ F +A+ +M ++ V
Sbjct: 268 NLLVRSYGKCGDMEKMKESFEKLDEKNVVSWSGTIAAFSQNGYFWEAIRQLQKMDLEGVQ 327
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
N+ TFV ++++ + G+ + +++I++ +V V ++LV+ Y KC +L A
Sbjct: 328 ANEVTFVSILDASV-WEEIEEGEFLRSRIIESGYGSNVAVCNSLVNMYGKCHSLGNAKEV 386
Query: 300 F-SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS----SL 353
F S KN +SW++L+ YA + T L + + L G +P+ T VL +
Sbjct: 387 FWSMEERKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRA 446
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ Q Q+H ++ G E R VV AN +
Sbjct: 447 SKQSSQIHARVLEAGLE--------------------------------RDVVVANALTA 474
Query: 414 I---YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR---AARI 467
+ Y R + K+ + + R D + WN ++AA A +G KE L++F+ M +
Sbjct: 475 LLNMYARCHSLEDARKVFAGMCRKDAICWNSLLAAYAQSGSGKEALQIFREMDLEGCKSM 534
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI-ISSDTFVCNMLIDMYGKCGSIGSS 526
P++ TFVS + AC+ +LA G H + E+ + S+ V N LI MYGKC + +
Sbjct: 535 KPNDVTFVSTIDACANSMDLASGIVFHR--RAAEVGMDSNVVVANSLIKMYGKCKRLEEA 592
Query: 527 VKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ +FN + R++++W ALISA NG +RALE + M G +PDR+ I+VL AC
Sbjct: 593 MSVFNRILGIRDLVSWNALISAFAQNGDGRRALETYWAMIREGVRPDRITFISVLDACAT 652
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
G + EG E+ R G E +V++ R G+ EAE
Sbjct: 653 LGSIAEGREI-HRQASEGGFESVDAVLGTLVNMYGRCGNAMEAE 695
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 140/570 (24%), Positives = 272/570 (47%), Gaps = 52/570 (9%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
FV L+ +YG+ G L+E + + M ++ +W +++ + ++G ++D + F ++
Sbjct: 65 FVENLLINMYGKCGALEEARKILDRMEDSNVFSWTIMLAAYAQNGHLDDALECFWKM--- 121
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELLVANSLVNMYFQCAGIWS 194
E+ ++ V +I L + G+ H + + GF ++++ N+LV++Y +C +
Sbjct: 122 ELEGVRANRVTIISALGCCKSFSRGQWFHSRIKQEGFLPDDVMIQNALVSLYGRCCEVDQ 181
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A +F ++ +D+VSW +I A ++ + +A+ + M D V P + TF+ ++ +
Sbjct: 182 ARSVFDEICNKDLVSWTAMISAFVQNGHPDRAMVCFWSMQADGVKPCRVTFITILEAVME 241
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
+++ + + IH ++I+ LE D + + LV Y KC ++E F ++ KN+VSW+
Sbjct: 242 TRDARVCEEIHLQIIETGLEKDDKLLNLLVRSYGKCGDMEKMKESFEKLDEKNVVSWSGT 301
Query: 315 ILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ---LHCLIIRMGYE 370
I ++ ++ + L G + NE TF +L +S+ ++ + L II GY
Sbjct: 302 IAAFSQNGYFWEAIRQLQKMDLEGVQANEVTFVSILDASVWEEIEEGEFLRSRIIESGYG 361
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ V SL+ Y K + +A ++
Sbjct: 362 SNVAVCNSLVNMYGKCHSLGNAKEVFWSME------------------------------ 391
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
ER + +SW+ ++AA A N E ++LF++M + PD T +S+L AC L
Sbjct: 392 -ERKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRASKQS 450
Query: 491 SSLHGLIKKTEIISSDTFVCN---MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISA 547
S +H + + + D V N L++MY +C S+ + K+F M ++ I W +L++A
Sbjct: 451 SQIHARVLEAG-LERDVVVANALTALLNMYARCHSLEDARKVFAGMCRKDAICWNSLLAA 509
Query: 548 LGLNGFAQRALEKFREMEFLG---FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
+G + AL+ FREM+ G KP+ V ++ + AC + + G+ R
Sbjct: 510 YAQSGSGKEALQIFREMDLEGCKSMKPNDVTFVSTIDACANSMDLASGIVFHRR-----A 564
Query: 605 VEPEMDHYHCVVDLLVR-YGHLKEAEKIIT 633
E MD V + L++ YG K E+ ++
Sbjct: 565 AEVGMDSNVVVANSLIKMYGKCKRLEEAMS 594
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 240/502 (47%), Gaps = 49/502 (9%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
LE G++IH ++ G V N L+NMY +C + A K+ +E +V SW ++ A
Sbjct: 45 LEAGKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKILDRMEDSNVFSWTIMLAA 104
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LEC 275
A++ + ALE + +M ++ V N+ T + + C G+ H+++ + L
Sbjct: 105 YAQNGHLDDALECFWKMELEGVRANRVTIISALGCCKSFSR---GQWFHSRIKQEGFLPD 161
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
DV + +ALV Y +C ++ A F EI NK++VSW A+I + P + +Q
Sbjct: 162 DVMIQNALVSLYGRCCEVDQARSVFDEICNKDLVSWTAMISAFVQNGHPDRAMVCFWSMQ 221
Query: 336 L-GYRPNEFTFSHVLRSSL----AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
G +P TF +L + + A ++H II G E + +L L+ SY K
Sbjct: 222 ADGVKPCRVTFITILEAVMETRDARVCEEIHLQIIETGLEKDDKLLNLLVRSYGK----- 276
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
G + + +L+ ++VSW+ IAA + NG
Sbjct: 277 ---------------------------CGDMEKMKESFEKLDEKNVVSWSGTIAAFSQNG 309
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
+ E + + M + + TFVS+L A S + G L I ++ S+ VC
Sbjct: 310 YFWEAIRQLQKMDLEGVQANEVTFVSILDA-SVWEEIEEGEFLRSRIIESG-YGSNVAVC 367
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGF 569
N L++MYGKC S+G++ ++F M +R N I+W++L++A N A A++ F+ M+ G
Sbjct: 368 NSLVNMYGKCHSLGNAKEVFWSMEERKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGL 427
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH---LK 626
KPDRV LI+VL AC ++ ++ R+ + G+E ++ + + LL Y L+
Sbjct: 428 KPDRVTLISVLDACGDLRASKQSSQIHARVLEA-GLERDVVVANALTALLNMYARCHSLE 486
Query: 627 EAEKIITTMPFPPNALIWRTFL 648
+A K+ M +A+ W + L
Sbjct: 487 DARKVFAGMC-RKDAICWNSLL 507
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 154/590 (26%), Positives = 274/590 (46%), Gaps = 64/590 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQL 61
+N +S++S+++AY++ +A+++F +M G +P + T +L +C L + +Q+
Sbjct: 394 KNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRASKQSSQI 453
Query: 62 QASVLKNGL----FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
A VL+ GL A+A TALL +Y R L++ VF M RK + WNS+++ +
Sbjct: 454 HARVLEAGLERDVVVANAL--TALLNMYARCHSLEDARKVFAGMCRKDAICWNSLLAAYA 511
Query: 118 KHGFVEDCMFLFCELVR---SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ G ++ + +F E+ + + +FV I +N DL G H + G D
Sbjct: 512 QSGSGKEALQIFREMDLEGCKSMKPNDVTFVSTIDACANSMDLASGIVFHRRAAEVGMDS 571
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRM 233
++VANSL+ MY +C + A +F + IRD+VSWN +I A A++ + +ALE Y M
Sbjct: 572 NVVVANSLIKMYGKCKRLEEAMSVFNRILGIRDLVSWNALISAFAQNGDGRRALETYWAM 631
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ V P++ TF+ V+++CA L + G+ IH + + E V LV+ Y +C N
Sbjct: 632 IREGVRPDRITFISVLDACATLGSIAEGREIHRQASEGGFESVDAVLGTLVNMYGRCGNA 691
Query: 294 EGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A L F ++ ++ ++WNA+ + ++ +L + G +P+ TF +L +
Sbjct: 692 MEAELAFGKLQQRDAIAWNAVAAAITQTGDQRRALGILRGMDNEGVKPDNVTFITLLDTC 751
Query: 353 LAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
L H + +G+ ++ +LG
Sbjct: 752 ADCNALVEGKIFHARAMELGF-GFDIILG------------------------------- 779
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N + +Y + G E ++ + + + VSWN +I A A NG K + LF+ M I
Sbjct: 780 NALLNMYGKCGSLREANRVFAAMPVRNSVSWNTLIVAYAQNGHVKLAIGLFRDMDLEGIV 839
Query: 469 PDNYTFVSLLSACSKLCNLALGSSL-------HGLIKKTEIISSDTFVCNMLIDMYGKCG 521
P+ +F+S+ ACS L GS HGL+ E + C +D+ G+ G
Sbjct: 840 PNQVSFLSIFFACSHAGMLEEGSKYFQYMVADHGLVPTPE-----HYGC--FVDLLGRTG 892
Query: 522 SIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
+ + ++ M D + W L+ + L ++A + LG K
Sbjct: 893 RLADAEELVTGMAEDARSLDWLILLGSSTLQENVEQAKRAVQHAVKLGSK 942
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 178/415 (42%), Gaps = 44/415 (10%)
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
N +T+ +++ C L GK IH ++ + + FV + L++ Y KC LE A
Sbjct: 27 ANPSTYALMLDWCVRLGALEAGKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKI 86
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL 358
+ + N+ SW ++ YA ++L G R N T L +F
Sbjct: 87 LDRMEDSNVFSWTIMLAAYAQNGHLDDALECFWKMELEGVRANRVTIISALGCCKSFSRG 146
Query: 359 Q-LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
Q H I + G+ +P V+ N + +Y R
Sbjct: 147 QWFHSRIKQEGF-------------------------------LPDDVMIQNALVSLYGR 175
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
+ ++ + ++ D+VSW +I+A NG + F M+A + P TF+++
Sbjct: 176 CCEVDQARSVFDEICNKDLVSWTAMISAFVQNGHPDRAMVCFWSMQADGVKPCRVTFITI 235
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L A + + + +H I +T + D + N+L+ YGKCG + + F ++ ++N
Sbjct: 236 LEAVMETRDARVCEEIHLQIIETGLEKDDKLL-NLLVRSYGKCGDMEKMKESFEKLDEKN 294
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
V++W+ I+A NG+ A+ + ++M+ G + + V +++L A V E +E E
Sbjct: 295 VVSWSGTIAAFSQNGYFWEAIRQLQKMDLEGVQANEVTFVSILDAS-----VWEEIEEGE 349
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVR-YGH---LKEAEKIITTMPFPPNALIWRTFL 648
+ RS +E V + LV YG L A+++ +M N + W + +
Sbjct: 350 FL-RSRIIESGYGSNVAVCNSLVNMYGKCHSLGNAKEVFWSMEERKNEISWSSLV 403
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
+ V +L ++ R A P Y +L C +L L G +H + + + FV N+
Sbjct: 15 QAVEDLEQHQRDAN--PSTYAL--MLDWCVRLGALEAGKRIHRHSVECGM-GKNRFVENL 69
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
LI+MYGKCG++ + KI + M D NV +WT +++A NG ALE F +ME G + +
Sbjct: 70 LINMYGKCGALEEARKILDRMEDSNVFSWTIMLAAYAQNGHLDDALECFWKMELEGVRAN 129
Query: 573 RVALIAVLTACR--------HGGLVREGMELFERMNRS-----YGVEPEMDHYHCVVDLL 619
RV +I+ L C+ H + +EG + M ++ YG E+D V D +
Sbjct: 130 RVTIISALGCCKSFSRGQWFHSRIKQEGFLPDDVMIQNALVSLYGRCCEVDQARSVFDEI 189
Query: 620 VRYGHLKEAEKI--ITTMPFPPNALI--WRTFLEGCQRCRI 656
+ I P A++ W +G + CR+
Sbjct: 190 CNKDLVSWTAMISAFVQNGHPDRAMVCFWSMQADGVKPCRV 230
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 182/623 (29%), Positives = 317/623 (50%), Gaps = 35/623 (5%)
Query: 32 MINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCL 91
MI GF+P F + GA A L + + + ++ Y + G L
Sbjct: 33 MIKTGFDPNTCRFNFQVQTHLQRGDLGA---ARKLFDEMPHKNVISTNTMIMGYLKSGNL 89
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
S+F+ M ++S+VTW ++ + +H + LF ++ R + + ++ G
Sbjct: 90 STARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGF 149
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
+ + + Q+HG V+K G+D L+V NSL++ Y + + A +FK + +D V++N
Sbjct: 150 TEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFN 209
Query: 212 TIIGALAESENFGKALELYLRMSVDIVF-PNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
++ ++ A+ L+ +M D+ F P++ TF V+ + + + G+ +H+ V+K
Sbjct: 210 ALLTGYSKEGFNHDAINLFFKMQ-DLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVK 268
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFL 329
+VFV +AL+DFY+K D + A F E+ + +S+N LI A + S+ L
Sbjct: 269 CNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLEL 328
Query: 330 LIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
EL + +F F+ +L S+A L L +G + S A ++
Sbjct: 329 FRELQFTRFDRRQFPFATLL--SIAANSLNLE--------------MGRQIHSQA---IV 369
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
+DA++ V+ N + +Y + ++ E ++ + L V W +I+
Sbjct: 370 TDAIS---------EVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQK 420
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
G +++ L+LF M A+I D+ T+ S+L AC+ L +L LG LH I ++ +S + F
Sbjct: 421 GLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLS-NVFS 479
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
+ L+DMY KCGSI ++++F EM RN ++W ALISA NG AL F +M G
Sbjct: 480 GSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGL 539
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
+P+ V+ +++L AC H GLV EG++ F M + Y +EP +HY +VD+L R G EAE
Sbjct: 540 QPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAE 599
Query: 630 KIITTMPFPPNALIWRTFLEGCQ 652
K++ MPF P+ ++W + L C+
Sbjct: 600 KLMARMPFEPDEIMWSSILNSCR 622
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 232/450 (51%), Gaps = 32/450 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCD-SLNPVE-G 58
M +++ V+FN++++ YS+ G+ DA+ +F M + GF P++FTF +L+ ++ +E G
Sbjct: 200 MAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFG 259
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + V+K F + FV ALL Y +H + E +F +MP +++N +++
Sbjct: 260 QQVHSFVVKCN-FVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAW 318
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G VE+ + LF EL + + F ++ +N +LE G QIH I E+LV
Sbjct: 319 NGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLV 378
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSLV+MY +C A ++F D+ + V W +I + L+L++ M +
Sbjct: 379 GNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKI 438
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ T+ ++ +CA L + LGK +H+++I++ +VF GSALVD YAKC +++ A
Sbjct: 439 GADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQ 498
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQL 357
F E+ +N VSWNALI YA E ++ G +PN +F +L +
Sbjct: 499 MFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCAC----- 553
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
HC ++ G + + +++ V L PR A+++ + R
Sbjct: 554 --SHCGLVEEGLQYF------------------NSMTQVYKLE-PRREHYASMV-DMLCR 591
Query: 418 TGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
+G+++E KL++++ PD + W+ ++ +C
Sbjct: 592 SGRFDEAEKLMARMPFEPDEIMWSSILNSC 621
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 156/598 (26%), Positives = 270/598 (45%), Gaps = 88/598 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC----DSLNPV 56
M R+VV++ +I Y++ +A +F M G P T LLS +S+N V
Sbjct: 99 MVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEV 158
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
AQ+ V+K G + + V +LL Y + L +F+ M K VT+N++++ +
Sbjct: 159 --AQVHGHVVKVG-YDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGY 215
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
K GF D + LF ++ +E +F V+ D+EFG+Q+H V+K F + +
Sbjct: 216 SKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNV 275
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VAN+L++ Y + I A K+F ++ D +S+N +I A + ++LEL+ +
Sbjct: 276 FVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFT 335
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
Q F +++ A N +G+ IH++ I +V VG++LVD YAKCD A
Sbjct: 336 RFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEA 395
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
+ F+++++++ V W ALI GY K + L +E+ + + T++ +LR+
Sbjct: 396 NRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANL 455
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L QLH IIR G + + +L+ YAK G I +AL
Sbjct: 456 ASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEAL------------------ 497
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++ ++ + VSWN +I+A A NGD L F+ M + + P++
Sbjct: 498 --------------QMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNS 543
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+F+S+L ACS CG + ++ FN
Sbjct: 544 VSFLSILCACS------------------------------------HCGLVEEGLQYFN 567
Query: 532 EMTDRNVIT-----WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
MT + + +++ L +G R E + M + F+PD + ++L +CR
Sbjct: 568 SMTQVYKLEPRREHYASMVDMLCRSG---RFDEAEKLMARMPFEPDEIMWSSILNSCR 622
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 231/522 (44%), Gaps = 63/522 (12%)
Query: 161 EQIHGLVIKNGFD-------------------------------YELLVANSLVNMYFQC 189
+ + +IK GFD ++ N+++ Y +
Sbjct: 27 QHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKS 86
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ +A +F + R VV+W +IG A+ F +A L+ M + P+ T ++
Sbjct: 87 GNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLL 146
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
+ ++ +H V+K + + V ++L+D Y K +L A F ++ K+ V
Sbjct: 147 SGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNV 206
Query: 310 SWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMG 368
++NAL+ GY+ + + +I L ++ LG+RP+EFTF+ VL + + I G
Sbjct: 207 TFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMD-------DIEFG 259
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
+ + +FV N V AN + Y++ + E KL
Sbjct: 260 QQVH---------------------SFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLF 298
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
++ D +S+N++I CA NG +E LELF+ ++ R + F +LLS + NL
Sbjct: 299 YEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLE 358
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
+G +H T+ I S+ V N L+DMY KC G + +IF ++ ++ + WTALIS
Sbjct: 359 MGRQIHSQAIVTDAI-SEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGY 417
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
G + L+ F EM D ++L AC + + G +L R+ RS G
Sbjct: 418 VQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRS-GCLSN 476
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ +VD+ + G +KEA ++ MP N++ W +
Sbjct: 477 VFSGSALVDMYAKCGSIKEALQMFQEMPV-RNSVSWNALISA 517
>gi|297796091|ref|XP_002865930.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311765|gb|EFH42189.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 878
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 192/661 (29%), Positives = 321/661 (48%), Gaps = 45/661 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP R V ++ +ISA+++ AL +F M+ G P +FTF ++ SC L + G
Sbjct: 83 MPQRTVFAWTVMISAFTKSQEFASALSLFEEMMASGIHPNEFTFSSVIRSCAGLGDLSYG 142
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV-SIFG 117
++ SVLK G F ++ VG++L LY + G L E +F + ++W ++ S+ G
Sbjct: 143 GRVHGSVLKTG-FEGNSVVGSSLTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLVG 201
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ E F + E++++ V E +FV ++ G S+ LEFG+ IH +I G ++
Sbjct: 202 ARKWSEALRF-YSEMIKAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSSIIVRGIPLNVV 259
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ SLV Y + + A ++ +DV W +++ + +A+ +L M
Sbjct: 260 LKTSLVYFYSHFSIMEDAVRVLNSTGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG 319
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE-GA 296
+ PN T+ +++ C+ +++ LGK IH++ IK E VG+ALV Y KC E A
Sbjct: 320 LHPNNFTYSAILSLCSAVRSLDLGKQIHSQTIKVGFEDSTDVGNALVSMYMKCSASEVEA 379
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF 355
F + + N+VSW LILG F LL+E+++ PN T S VLR+
Sbjct: 380 SRVFGAMISPNVVSWTTLILGLVDHGFEQDCFGLLMEMVKREVEPNFVTLSGVLRACSKL 439
Query: 356 Q----LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ +L++H ++R + V SL+ +YA SG + A N+ R+
Sbjct: 440 KYLRLVLEIHGYLLRRHVDGEMIVGNSLVDAYASSGKVD------YAWNVTRS------- 486
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++ D +++ ++ G ++ L + +M I D
Sbjct: 487 -------------------MDMRDNITYTSLVTRFNELGKHEMALSVINHMYGDGIRMDQ 527
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ +SA + L G LH K+ S V N L+DMY KCGS+ + K+F
Sbjct: 528 LSLPGFISASANLGAHETGKHLHCYSVKSG-FSGAVSVLNSLVDMYSKCGSLEDAKKVFE 586
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
E+ +V++W L+S L G AL F EM G +PD V + +L+AC G L
Sbjct: 587 EIAMPDVVSWNGLVSGLASIGRISSALSAFEEMRMKGTEPDSVTFLILLSACSKGRLTEM 646
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G+E F+ M + +EP+++HY +V +L R G L+EA ++ TM PNA+I++T L C
Sbjct: 647 GLEYFQSMKTIHNMEPQIEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRAC 706
Query: 652 Q 652
+
Sbjct: 707 R 707
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 157/524 (29%), Positives = 241/524 (45%), Gaps = 52/524 (9%)
Query: 135 SEVALTESSFVGVIHGLSNEQD-----LEF--------GEQIHGLVIKNGFDYELLVANS 181
++VA T S+F+ + LSN Q L F G IH VIK G L + N+
Sbjct: 3 TKVATTASTFLSRTNELSNLQQSCIRILSFCESSSSRIGLHIHCPVIKFGLLENLDLCNN 62
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+++Y + GIW+A K+F ++ R V +W +I A +S+ F AL L+ M + PN
Sbjct: 63 LLSLYLKTDGIWNARKLFDEMPQRTVFAWTVMISAFTKSQEFASALSLFEEMMASGIHPN 122
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ TF VI SCAGL + G +H V+K E + VGS+L D Y+KC L+ A FS
Sbjct: 123 EFTFSSVIRSCAGLGDLSYGGRVHGSVLKTGFEGNSVVGSSLTDLYSKCGKLKEARELFS 182
Query: 302 EISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL--- 357
+ N + +SW +I ++ ++ E+++ G PNEFTF +L +S L
Sbjct: 183 SLQNADTISWTMMISSLVGARKWSEALRFYSEMIKAGVPPNEFTFVKLLGASSFLGLEFG 242
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+H II G IP VV + Y+
Sbjct: 243 KTIHSSIIVRG--------------------------------IPLNVVLKTSLVYFYSH 270
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
+ V++L+ D+ W V++ N KE + F MR+ ++P+N+T+ ++
Sbjct: 271 FSIMEDAVRVLNSTGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTYSAI 330
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC-GSIGSSVKIFNEMTDR 536
LS CS + +L LG +H K S T V N L+ MY KC S + ++F M
Sbjct: 331 LSLCSAVRSLDLGKQIHSQTIKVGFEDS-TDVGNALVSMYMKCSASEVEASRVFGAMISP 389
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
NV++WT LI L +GF Q EM +P+ V L VL AC +R +E+
Sbjct: 390 NVVSWTTLILGLVDHGFEQDCFGLLMEMVKREVEPNFVTLSGVLRACSKLKYLRLVLEIH 449
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
+ R + V+ EM + +VD G + A + +M N
Sbjct: 450 GYLLRRH-VDGEMIVGNSLVDAYASSGKVDYAWNVTRSMDMRDN 492
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 148/608 (24%), Positives = 281/608 (46%), Gaps = 45/608 (7%)
Query: 50 CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
C+S + G + V+K GL + + LL LY + + +F++MP++++ W
Sbjct: 33 CESSSSRIGLHIHCPVIKFGLL-ENLDLCNNLLSLYLKTDGIWNARKLFDEMPQRTVFAW 91
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
++S F K + LF E++ S + E +F VI + DL +G ++HG V+K
Sbjct: 92 TVMISAFTKSQEFASALSLFEEMMASGIHPNEFTFSSVIRSCAGLGDLSYGGRVHGSVLK 151
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
GF+ +V +SL ++Y +C + A ++F ++ D +SW +I +L + + +AL
Sbjct: 152 TGFEGNSVVGSSLTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLVGARKWSEALRF 211
Query: 230 YLRMSVDIVFPNQTTFVYVINSCA--GLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
Y M V PN+ TFV ++ + + GL+ GK+IH+ +I + +V + ++LV FY
Sbjct: 212 YSEMIKAGVPPNEFTFVKLLGASSFLGLE---FGKTIHSSIIVRGIPLNVVLKTSLVYFY 268
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFS 346
+ +E A + +++ W +++ G+ + ++ +E+ LG PN FT+S
Sbjct: 269 SHFSIMEDAVRVLNSTGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTYS 328
Query: 347 HVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
+L A + L Q+H I++G+E+ V +L++ Y K
Sbjct: 329 AILSLCSAVRSLDLGKQIHSQTIKVGFEDSTDVGNALVSMYMKC---------------- 372
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
+ E ++ + P++VSW +I +G ++ L M
Sbjct: 373 ---------------SASEVEASRVFGAMISPNVVSWTTLILGLVDHGFEQDCFGLLMEM 417
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ P+ T +L ACSKL L L +HG + + + + V N L+D Y G
Sbjct: 418 VKREVEPNFVTLSGVLRACSKLKYLRLVLEIHGYLLRRH-VDGEMIVGNSLVDAYASSGK 476
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ + + M R+ IT+T+L++ G + AL M G + D+++L ++A
Sbjct: 477 VDYAWNVTRSMDMRDNITYTSLVTRFNELGKHEMALSVINHMYGDGIRMDQLSLPGFISA 536
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
+ G G L +S G + + +VD+ + G L++A+K+ + P+ +
Sbjct: 537 SANLGAHETGKHLHCYSVKS-GFSGAVSVLNSLVDMYSKCGSLEDAKKVFEEIAM-PDVV 594
Query: 643 IWRTFLEG 650
W + G
Sbjct: 595 SWNGLVSG 602
>gi|302789718|ref|XP_002976627.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
gi|300155665|gb|EFJ22296.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
Length = 734
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 196/648 (30%), Positives = 311/648 (47%), Gaps = 51/648 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQ 60
DRNV S+ ++SAY++ G+ +AL + M G P TF +L +C +L VE G +
Sbjct: 66 DRNVYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDVETGRK 125
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ A ++ G + D V TA+LG+Y + L + +F+ + RK +V+W +I++ F + G
Sbjct: 126 IHARMVFLG-WDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQLG 184
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ LF E+ V ES+FV ++ + LE G++++ I G+ ++ V +
Sbjct: 185 RPRVALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVFVGS 244
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+ V MY + + A+ F + + SWN I+ A + + +AL LY M V P
Sbjct: 245 TAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDVHGAEP 304
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T V ++ +C+ L G+ IHA++ D GSA+V YAKC +E A F
Sbjct: 305 DTFTHVCLLGACSSLGALEEGERIHARMGDKP---DGLAGSAIVAMYAKCGGIEHAMTAF 361
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ 359
+++S+ N+V WNALI GY L + L G + +TFS VL + + L
Sbjct: 362 TKMSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSGAKDLS 421
Query: 360 ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+H I+ G E + L+ +AK G + AL + R + N
Sbjct: 422 EGRAVHARIVSRGLEVVVPLQNGLVNMFAKCG------SLTLALEMFRGMASRN------ 469
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
VSWN ++ A +GD ELFK M P TF
Sbjct: 470 --------------------TVSWNSMVTAFCQHGDGGGAFELFKEMLLEGGEPHEQTFT 509
Query: 476 SLLSACSK--LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY-----GKCGSIGSSVK 528
S+L+ CS +L G +LH I + + SD V L+ MY KCG++ +
Sbjct: 510 SILNFCSHSACSSLDQGKALHQRITASG-VDSDPTVATCLLTMYLLNALAKCGALDDARA 568
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F+ + +NV++WTA+I + ALE FREME G + D + ++L AC H GL
Sbjct: 569 VFDGIRGKNVLSWTAMIVGYAQHARGDGALELFREMELDGIQADEITFTSILHACSHRGL 628
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
VR G E F M + + P +HY+ V+D+L R G + EAE++ P
Sbjct: 629 VRVGREYFRSMVEDHAIAPSAEHYNVVMDMLARAGRVGEAEEVAKVFP 676
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 151/604 (25%), Positives = 289/604 (47%), Gaps = 47/604 (7%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G ++ + ++G+ D ++G L+ +YG GC+ + +F+ + +++ +W ++S +
Sbjct: 21 KGMEIHKKLAESGVD-KDTYLGNNLIQMYGNCGCVGKAREIFDKLIDRNVYSWTIMLSAY 79
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G + + L ++ + +F+ ++ SN D+E G +IH ++ G+D +
Sbjct: 80 AQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDT 139
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+V+ +++ MY +C + A+K+F + +DVVSW II A ++ ALEL+ M +D
Sbjct: 140 VVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLD 199
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN++TFV ++ +C + G ++ + I DVFVGS V Y++ NL A
Sbjct: 200 GVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEA 259
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF 355
F + K+ SWNA++ Y + L + + + G P+ FT +L + +
Sbjct: 260 KAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDVHGAEPDTFTHVCLLGACSSL 319
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L E E + +A+ G D LA + I +Y
Sbjct: 320 GAL-----------EEGERI-------HARMGDKPDGLA-------------GSAIVAMY 348
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G + +++ ++V WN +IA ++E L+L+ M + D YTF
Sbjct: 349 AKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFS 408
Query: 476 SLLSACSKLCNLALGSSLHGLI--KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
S+L ACS +L+ G ++H I + E++ + N L++M+ KCGS+ ++++F M
Sbjct: 409 SVLGACSGAKDLSEGRAVHARIVSRGLEVVVP---LQNGLVNMFAKCGSLTLALEMFRGM 465
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL--VRE 591
RN ++W ++++A +G A E F+EM G +P ++L C H + +
Sbjct: 466 ASRNTVSWNSMVTAFCQHGDGGGAFELFKEMLLEGGEPHEQTFTSILNFCSHSACSSLDQ 525
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDL-----LVRYGHLKEAEKIITTMPFPPNALIWRT 646
G L +R+ S GV+ + C++ + L + G L +A + + N L W
Sbjct: 526 GKALHQRITAS-GVDSDPTVATCLLTMYLLNALAKCGALDDARAVFDGIR-GKNVLSWTA 583
Query: 647 FLEG 650
+ G
Sbjct: 584 MIVG 587
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 157/569 (27%), Positives = 275/569 (48%), Gaps = 42/569 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
++VVS+ +II+A+S+ G AL +F M G +P + TF +L+ C ++ +E G +L
Sbjct: 168 KDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKL 227
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ G + AD FVG+ + +Y R G L E + F+ + KS +WN+IV + +HG
Sbjct: 228 YKRAISCG-YGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHGH 286
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + L+ E+ + V ++ S+ LE GE+IH + G + L ++
Sbjct: 287 ISQALSLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIHA---RMGDKPDGLAGSA 343
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
+V MY +C GI A F + +VV WN +I + E++ +AL+LY M+++ + +
Sbjct: 344 IVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEAD 403
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TF V+ +C+G ++ G+++HA+++ LE V + + LV+ +AKC +L A F
Sbjct: 404 IYTFSSVLGACSGAKDLSEGRAVHARIVSRGLEVVVPLQNGLVNMFAKCGSLTLALEMFR 463
Query: 302 EISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLR-------SSL 353
++++N VSWN+++ + F L E+L G P+E TF+ +L SSL
Sbjct: 464 GMASRNTVSWNSMVTAFCQHGDGGGAFELFKEMLLEGGEPHEQTFTSILNFCSHSACSSL 523
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q LH I G ++ V L+T Y + +ALA AL+ RAV G
Sbjct: 524 D-QGKALHQRITASGVDSDPTVATCLLTMY-----LLNALAKCGALDDARAVFD-----G 572
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
I + +++SW +I A + LELF+ M I D T
Sbjct: 573 IRGK-----------------NVLSWTAMIVGYAQHARGDGALELFREMELDGIQADEIT 615
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F S+L ACS + +G + + I+ N+++DM + G +G + ++
Sbjct: 616 FTSILHACSHRGLVRVGREYFRSMVEDHAIAPSAEHYNVVMDMLARAGRVGEAEEVAKVF 675
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFR 562
+ L+S+ ++G + + R
Sbjct: 676 PAIKHVALMTLVSSSQVHGVDSSVVARKR 704
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 234/506 (46%), Gaps = 38/506 (7%)
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
GLS + L G +IH + ++G D + + N+L+ MY C + A ++F + R+V S
Sbjct: 14 GLS--KSLSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREIFDKLIDRNVYS 71
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
W ++ A A++ ++ +AL L +M ++ + PN TF++++ +C+ L + G+ IHA+++
Sbjct: 72 WTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDVETGRKIHARMV 131
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIF 328
+ D V +A++ Y+KC+ L A F + K++VSW A+I ++ P ++
Sbjct: 132 FLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQLGRPRVALE 191
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
L E+ G +PNE TF ++L + L+ G + Y+ + G
Sbjct: 192 LFWEMDLDGVKPNESTFVNILAACTYMDALE-------DGDKLYKRAI--------SCGY 236
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
+D TA+ +Y+R G E L SWN ++ A
Sbjct: 237 GADVFVGSTAVT-------------MYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQ 283
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
+G + L L+K M PD +T V LL ACS L L G +H + D
Sbjct: 284 HGHISQALSLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIHARMGD----KPDGL 339
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+ ++ MY KCG I ++ F +M+ NV+ W ALI+ Q AL+ + M G
Sbjct: 340 AGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEG 399
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
+ D +VL AC + EG + R+ S G+E + + +V++ + G L A
Sbjct: 400 LEADIYTFSSVLGACSGAKDLSEGRAVHARI-VSRGLEVVVPLQNGLVNMFAKCGSLTLA 458
Query: 629 EKIITTMPFPPNALIWRTFLEG-CQR 653
++ M N + W + + CQ
Sbjct: 459 LEMFRGMA-SRNTVSWNSMVTAFCQH 483
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 130/262 (49%), Gaps = 10/262 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
M NVV +N++I+ Y + + ++AL ++ M G E +TF +L +C + EG
Sbjct: 364 MSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSGAKDLSEG 423
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A ++ GL + L+ ++ + G L + +F M ++ V+WNS+V+ F +
Sbjct: 424 RAVHARIVSRGLEVV-VPLQNGLVNMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQ 482
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE--QDLEFGEQIHGLVIKNGFDYEL 176
HG LF E++ E +F +++ S+ L+ G+ +H + +G D +
Sbjct: 483 HGDGGGAFELFKEMLLEGGEPHEQTFTSILNFCSHSACSSLDQGKALHQRITASGVDSDP 542
Query: 177 LVANSLVNMYF-----QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
VA L+ MY +C + A +F + ++V+SW +I A+ ALEL+
Sbjct: 543 TVATCLLTMYLLNALAKCGALDDARAVFDGIRGKNVLSWTAMIVGYAQHARGDGALELFR 602
Query: 232 RMSVDIVFPNQTTFVYVINSCA 253
M +D + ++ TF ++++C+
Sbjct: 603 EMELDGIQADEITFTSILHACS 624
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D+ ++ LL C +L+ G +H + ++ + DT++ N LI MYG CG +G + +I
Sbjct: 2 DSASYGRLLRECGLSKSLSKGMEIHKKLAESGV-DKDTYLGNNLIQMYGNCGCVGKAREI 60
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F+++ DRNV +WT ++SA NG AL +M+ G +P+ V + +L AC + G V
Sbjct: 61 FDKLIDRNVYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDV 120
Query: 590 REGMELFERM 599
G ++ RM
Sbjct: 121 ETGRKIHARM 130
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 14/173 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL------SCDSLN 54
M RN VS+NS+++A+ + G A +F M+ G EP + TF +L +C SL+
Sbjct: 465 MASRNTVSWNSMVTAFCQHGDGGGAFELFKEMLLEGGEPHEQTFTSILNFCSHSACSSLD 524
Query: 55 PVEGAQLQASVLKNGLFCADAFVGTALLGLY-----GRHGCLDEVVSVFEDMPRKSLVTW 109
+G L + +G+ +D V T LL +Y + G LD+ +VF+ + K++++W
Sbjct: 525 --QGKALHQRITASGVD-SDPTVATCLLTMYLLNALAKCGALDDARAVFDGIRGKNVLSW 581
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ 162
+++ + +H + + LF E+ + E +F ++H S+ + G +
Sbjct: 582 TAMIVGYAQHARGDGALELFREMELDGIQADEITFTSILHACSHRGLVRVGRE 634
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 200/691 (28%), Positives = 337/691 (48%), Gaps = 60/691 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M R+VVS+NS+I+ YS+ G V++A +F + + G EG
Sbjct: 197 MIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAK-------EGRI 249
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS------ 114
+A + + + A++ Y ++G L +F++MP K++ +WNS+V+
Sbjct: 250 EEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCY 309
Query: 115 -------IFGK-------------HGFVE-----DCMFLFCELVRSEVALTESSFVGVIH 149
+F + G+V + +F ++ R+ +S FV V+
Sbjct: 310 RMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLS 369
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
++ DLE + + IK G++ +++V ++++N Y + + A F+ + R+ S
Sbjct: 370 AITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYS 429
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
W T+I A A+ A++LY R+ P QT A Q +G+ A++I
Sbjct: 430 WTTMIAAFAQCGRLDDAIQLYERV------PEQTVATKTAMMTAYAQ---VGRIQKARLI 480
Query: 270 -KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSI 327
L +V +A++ Y + L+ A F ++ KN SW A+I G+ ++ S ++
Sbjct: 481 FDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREAL 540
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSY 383
LLIEL + G P++ +F+ L + +++ H L I+ G + YV+ L++ Y
Sbjct: 541 ELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMY 600
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
AK G + D + + V ++I+G+ + ++ + ++ + D+VSW +I
Sbjct: 601 AKCGNVEDGSHVFRTIRVKDTVSWNSLISGL-SENYMLDDARVVFEKMPKRDVVSWTAII 659
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
+A G + L+LF M A I P+ T SLLSAC L + LG H LI K +
Sbjct: 660 SAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFK---L 716
Query: 504 SSDTF--VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
DTF V N LI MY KCG +F EM + ++ITW A++ NG + A++ F
Sbjct: 717 GFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIF 775
Query: 562 REMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR 621
+ME G PD+++ + VL AC H GLV EG F M + YG+ P + HY C+VDLL R
Sbjct: 776 EQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGR 835
Query: 622 YGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G+L EAE +I MP P+++IW L C+
Sbjct: 836 AGYLSEAEALIENMPVKPDSVIWEALLGACR 866
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 180/696 (25%), Positives = 306/696 (43%), Gaps = 132/696 (18%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLN-PVEGAQ 60
P ++ N+ I R G VE+A R+F MI R ++ +++ S N V+ A+
Sbjct: 167 PQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDV----VSWNSMINGYSQNGKVDEAR 222
Query: 61 LQASVLKNGLFCADAFVG------TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
L LF DAFVG T LL Y + G ++E VFE M +++V+WN+++S
Sbjct: 223 L--------LF--DAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMIS 272
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ ++G +++ LF E+ VA
Sbjct: 273 GYVQNGDLKNARKLFDEMPEKNVA------------------------------------ 296
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
NS+V Y C + A ++F + R+ VSW +I ++ +A +++++M
Sbjct: 297 ---SWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMC 353
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ P+Q+ FV V+++ GL + L S+ IK E DV VGSA+++ Y + +L+
Sbjct: 354 RTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLD 413
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F + +N SW +I +A L + +QL R E T +
Sbjct: 414 LAMHFFETMPERNEYSWTTMIAAFAQCGR------LDDAIQLYERVPEQTVA-------- 459
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIAG 413
++MT+YA+ G I A L F LN P V IIAG
Sbjct: 460 --------------------TKTAMMTAYAQVGRIQKARLIFDEILN-PNVVAWNAIIAG 498
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
Y + G E L ++ + SW +IA N + +E LEL + + P + +
Sbjct: 499 -YTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSS 557
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI--GSSV---- 527
F S LSAC+ + ++ +G +H L KT +++V N LI MY KCG++ GS V
Sbjct: 558 FTSALSACANIGDVEIGRVIHSLAIKTG-CQFNSYVMNGLISMYAKCGNVEDGSHVFRTI 616
Query: 528 -------------------------KIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
+F +M R+V++WTA+ISA G + AL+ F
Sbjct: 617 RVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFL 676
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
+M G KP+++ + ++L+AC + G ++ G E F + G + + + ++ + +
Sbjct: 677 DMLARGIKPNQLTVTSLLSACGNLGAIKLG-EQFHALIFKLGFDTFLFVGNSLITMYFKC 735
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAK 658
G+ ++ + MP + + W L GC + + K
Sbjct: 736 GY-EDGFCVFEEMP-EHDLITWNAVLVGCAQNGLGK 769
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 143/608 (23%), Positives = 269/608 (44%), Gaps = 88/608 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC----DSLNPV 56
MP+RN VS+ +IS Y +A +F+ M P Q F +LS D L +
Sbjct: 321 MPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELI 380
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
L+ +K G + D VG+A+L Y R+G LD + FE MP ++ +W ++++ F
Sbjct: 381 --GSLRPIAIKTG-YEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAF 437
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ G ++D + L+ E V + T+++ + + Q L+ + +
Sbjct: 438 AQCGRLDDAIQLY-ERVPEQTVATKTAMMTAYAQVGRIQKAR-------LIFDEILNPNV 489
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ N+++ Y Q + A+ +F+ + +++ SW +I ++E +ALEL + +
Sbjct: 490 VAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRS 549
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
P+ ++F +++CA + + +G+ IH+ IK + + +V + L+ YAKC N+E
Sbjct: 550 GSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDG 609
Query: 297 HLCFSEISNKNIVSWNALILGYASK------------------SSPTSIF---------- 328
F I K+ VSWN+LI G + S T+I
Sbjct: 610 SHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGE 669
Query: 329 ----LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLM 380
L +++L G +PN+ T + +L + + Q H LI ++G++ + +V SL+
Sbjct: 670 VALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLI 729
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
T Y K G Y + + ++ D+++WN
Sbjct: 730 TMYFKCG---------------------------------YEDGFCVFEEMPEHDLITWN 756
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
V+ CA NG KE +++F+ M I PD +F+ +L ACS + G + + +
Sbjct: 757 AVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQK 816
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLN---GFAQR 556
I + ++D+ G+ G + + + M + + + W AL+ A ++ QR
Sbjct: 817 YGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQR 876
Query: 557 ALEKFREM 564
E+ +M
Sbjct: 877 VAERLFQM 884
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 131/254 (51%), Gaps = 7/254 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+VVS+ +IISAY + G+ E AL +FL M+ RG +P Q T LLS C +L ++ G
Sbjct: 647 MPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLG 706
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q A + K G F FVG +L+ +Y + G D VFE+MP L+TWN+++ +
Sbjct: 707 EQFHALIFKLG-FDTFLFVGNSLITMYFKCGYEDGFC-VFEEMPEHDLITWNAVLVGCAQ 764
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG-EQIHGLVIKNGFDYELL 177
+G ++ + +F ++ + + SF+GV+ S+ ++ G + + K G +
Sbjct: 765 NGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVY 824
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRMSVD 236
+V++ + + AE + +++ ++ D V W ++GA N + R+
Sbjct: 825 HYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERL-FQ 883
Query: 237 IVFPNQTTFVYVIN 250
+ P T+V + N
Sbjct: 884 MTKPKSATYVLLSN 897
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 175/408 (42%), Gaps = 31/408 (7%)
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
F +VI +G +N K + +F + + + +E A F+E+
Sbjct: 151 FKFVIRHKSGAKN------------KETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMI 198
Query: 305 NKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
+++VSWN++I GY+ LL + N T++ +L ++ +
Sbjct: 199 QRDVVSWNSMINGYSQNGKVDEARLLFDAF---VGKNIRTWTILLTGYAKEGRIEEAREV 255
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
E ++++ Y ++G + +A + + V N + Y + +E
Sbjct: 256 FESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMP-EKNVASWNSVVTGYCHCYRMSEA 314
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+L Q+ + VSW ++I+ H DY E ++F M PD FV +LSA + L
Sbjct: 315 RELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGL 374
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
+L L SL + KT D V + +++ Y + GS+ ++ F M +RN +WT +
Sbjct: 375 DDLELIGSLRPIAIKTG-YEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTM 433
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVAL--IAVLTACRHGGLVREGMELFERMNRS 602
I+A G A++ + + P++ A++TA G +++ +F+ +
Sbjct: 434 IAAFAQCGRLDDAIQLYERV------PEQTVATKTAMMTAYAQVGRIQKARLIFDEI--- 484
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ P + ++ ++ + G LKEA+ + MP N+ W + G
Sbjct: 485 --LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPV-KNSASWAAMIAG 529
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
K E + F CN I G+ G + + ++FNEM R+V++W ++I+ NG A
Sbjct: 162 KNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEA 221
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
F F+G K R I +LT G + E E+FE M E + ++ ++
Sbjct: 222 RLLFD--AFVG-KNIRTWTI-LLTGYAKEGRIEEAREVFESM-----TERNVVSWNAMIS 272
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC 654
V+ G LK A K+ MP N W + + G C
Sbjct: 273 GYVQNGDLKNARKLFDEMP-EKNVASWNSVVTGYCHC 308
>gi|15229605|ref|NP_190543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183390|sp|Q9M2Y4.1|PP276_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49740
gi|6723419|emb|CAB66912.1| putative protein [Arabidopsis thaliana]
gi|332645063|gb|AEE78584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 737
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 204/698 (29%), Positives = 337/698 (48%), Gaps = 97/698 (13%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINR--GFEPTQFTFG-GLLSCDSL-NPVEGAQ 60
+++ N ++ +R G +AL++F ++R P Q++ + + L + + G Q
Sbjct: 20 TLLNLNRRLTGLTRSGENRNALKLFAD-VHRCTTLRPDQYSVSLAITTARHLRDTIFGGQ 78
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCL-------DEV------------------- 94
+ +++GL C + V LL LY R G L DE+
Sbjct: 79 VHCYAIRSGLLC-HSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLG 137
Query: 95 -----VSVFEDMP-RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI 148
VF+ MP R + WN++++ + G+ E + LF E+ + V + F ++
Sbjct: 138 DIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL 197
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK--DVEIRD 206
+ + L+FG+Q+H LVIK GF V N+L+ MYF C + A +F+ DV +RD
Sbjct: 198 -SMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRD 256
Query: 207 VVSWNTIIGALAESEN------FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
V++N +I LA + F K LE LR P TFV V+ SC+ + +
Sbjct: 257 QVTFNVVIDGLAGFKRDESLLVFRKMLEASLR-------PTDLTFVSVMGSCSC---AAM 306
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY-A 319
G +H IK E V +A + Y+ ++ AH F + K++V+WN +I Y
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 320 SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL-HCLIIRMGYENYEYVLGS 378
+K +++ + + +G +P+EFTF +L +SL +L++ II+ G
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFG---------- 416
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
+ + I A++ A Y++ GQ + L + R +++S
Sbjct: 417 ----------------LSSKIEISNALISA------YSKNGQIEKADLLFERSLRKNLIS 454
Query: 439 WNIVIAACAHNGDYKEVLELFKYM--RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
WN +I+ HNG E LE F + RI PD YT +LLS C +L LGS H
Sbjct: 455 WNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAY 514
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
+ + +T + N LI+MY +CG+I +S+++FN+M++++V++W +LISA +G +
Sbjct: 515 VLRHGQFK-ETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGEN 573
Query: 557 ALEKFREMEFLG-FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
A+ ++ M+ G PD AVL+AC H GLV EG+E+F M +GV +DH+ C+
Sbjct: 574 AVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCL 633
Query: 616 VDLLVRYGHLKEAEKI--ITTMPFPPNALIWRTFLEGC 651
VDLL R GHL EAE + I+ +W C
Sbjct: 634 VDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSAC 671
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 161/574 (28%), Positives = 282/574 (49%), Gaps = 69/574 (12%)
Query: 1 MPDRNVVS-FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEG 58
MP+R+ V+ +N++I+ GY E ++ +F M G +F F +LS CD + G
Sbjct: 149 MPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFG 208
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE--DMPRKSLVTWNSIVSIF 116
Q+ + V+K G F A + V AL+ +Y + + VFE D+ + VT+N ++
Sbjct: 209 KQVHSLVIKAGFFIASSVV-NALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVID-- 265
Query: 117 GKHGFVED-CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
G GF D + +F +++ + + T+ +FV V+ S G Q+HGL IK G++
Sbjct: 266 GLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKY 322
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
LV+N+ + MY +A K+F+ +E +D+V+WNT+I + +++ A+ +Y RM +
Sbjct: 323 TLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHI 382
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V P++ TF ++ + L + + + A +IK L + + +AL+ Y+K +E
Sbjct: 383 IGVKPDEFTFGSLLATSLDLD---VLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEK 439
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE----LLQLGYR--PNEFTFSHVL 349
A L F KN++SWNA+I G+ P F +E LL+ R P+ +T S +L
Sbjct: 440 ADLLFERSLRKNLISWNAIISGFYHNGFP---FEGLERFSCLLESEVRILPDAYTLSTLL 496
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
++ L L G + + YVL + G + L N
Sbjct: 497 SICVSTSSLML-------GSQTHAYVL--------RHGQFKETLI-------------GN 528
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR-AARIY 468
+ +Y++ G ++++ +Q+ D+VSWN +I+A + +G+ + + +K M+ ++
Sbjct: 529 ALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVI 588
Query: 469 PDNYTFVSLLSACSKLCNLALGSSL-------HGLIKKTEIISSDTFVCNMLIDMYGKCG 521
PD TF ++LSACS + G + HG+I+ D F C L+D+ G+ G
Sbjct: 589 PDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNV-----DHFSC--LVDLLGRAG 641
Query: 522 SIG---SSVKIFNEMTDRNVITWTALISALGLNG 552
+ S VKI + V W AL SA +G
Sbjct: 642 HLDEAESLVKISEKTIGSRVDVWWALFSACAAHG 675
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 151/645 (23%), Positives = 260/645 (40%), Gaps = 132/645 (20%)
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGV-I 148
CL E +S + +L+ N ++ + G + + LF ++ R + V + I
Sbjct: 6 CLTESLSAIAE-NSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAI 64
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
+ +D FG Q+H I++G V+N+L+++Y + + S +K F +++ DV
Sbjct: 65 TTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVY 124
Query: 209 SWNTIIGALAESENFGKALELYLRM------------------------SVDI------- 237
SW T++ A + + A E++ +M SV++
Sbjct: 125 SWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKL 184
Query: 238 -VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V ++ F +++ C + GK +H+ VIK V +AL+ Y C + A
Sbjct: 185 GVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDA 243
Query: 297 HLCFSE--ISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SL 353
L F E ++ ++ V++N +I G A S+ + ++L+ RP + TF V+ S S
Sbjct: 244 CLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSC 303
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
A Q+H L I+ GYE Y V + MT
Sbjct: 304 AAMGHQVHGLAIKTGYEKYTLVSNATMT-------------------------------- 331
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y+ + K+ LE D+V+WN +I++ K + ++K M + PD +T
Sbjct: 332 MYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFT 391
Query: 474 FVSLLSACSKLCNLALGSSL---HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
F SLL+ L L + + GL K EI N LI Y K G I + +F
Sbjct: 392 FGSLLATSLDLDVLEMVQACIIKFGLSSKIEI-------SNALISAYSKNGQIEKADLLF 444
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKF-----REMEFLGFKPDRVALIAVLTAC-- 583
+N+I+W A+IS NGF LE+F E+ L PD L +L+ C
Sbjct: 445 ERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRIL---PDAYTLSTLLSICVS 501
Query: 584 ---------------RHG------------------GLVREGMELFERMNRSYGVEPEMD 610
RHG G ++ +E+F +M+ E ++
Sbjct: 502 TSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMS-----EKDVV 556
Query: 611 HYHCVVDLLVRYGHLKEAEKIITTM----PFPPNALIWRTFLEGC 651
++ ++ R+G + A TM P+A + L C
Sbjct: 557 SWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSAC 601
>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
Length = 772
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 190/666 (28%), Positives = 327/666 (49%), Gaps = 46/666 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEG--A 59
P + +NS+I + AL M+ P+ FT S + G A
Sbjct: 71 PRPDAFLWNSLIRTHHCASDFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGA 130
Query: 60 QLQASVLKNGLFCADA---FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ A ++ GL D V ++L+ +Y R G + + V +FE+M + +V W ++VS
Sbjct: 131 SVHAYCVRYGLLAVDGGSVAVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGC 190
Query: 117 GKHGFVEDCMFLFCELVR----SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
++G D + E+VR + + + +L G +HG +K G
Sbjct: 191 VRNGECGDGLRYLVEMVRLAGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGV 250
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+V ++L +MY +C A +F ++ +DVVSW ++IG +A+EL+
Sbjct: 251 GDSPMVISALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQE 310
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M + P+ +++ N GK+ HA ++K +V VG+AL+ Y K +
Sbjct: 311 MMESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFEL 370
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL--- 349
++ A F + ++ SWN +I+GY ++ L+L YR +F ++
Sbjct: 371 VDNAGRVFRLLHQRDADSWNLMIVGYCKAGCD------VKCLEL-YREMQFRDTYEFLCD 423
Query: 350 RSSLAFQLLQLHCLI-IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+SL + L+ +R+G + Y + K L D+ A
Sbjct: 424 ANSLVSAISSCSRLVELRLGRSAHCYSI--------KHWLDEDSSV-------------A 462
Query: 409 NIIAGIYNRTGQYNETVKL--LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
N++ G+Y R G+++ K+ L++L + D+V+WN +I++ AH G + L+ M
Sbjct: 463 NVLIGMYGRCGKFDHACKIFGLAKL-KGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEG 521
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
+ P++ T ++++SAC+ L L G +H +K+ D + LIDMY KCG +G++
Sbjct: 522 LTPNSTTLITVISACANLVALERGEKIHSYVKEMGW-DYDVSINTALIDMYAKCGQLGTA 580
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
+IF+ M +V+ W +IS G++G A++ALE F +ME KP+ V +A+L+AC H
Sbjct: 581 RRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHS 640
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
GL+ EG +LF RM + Y +EP + HY C+VDLL + GHL+EAE ++ MP P+ IW T
Sbjct: 641 GLLEEGRQLFTRMGK-YSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGT 699
Query: 647 FLEGCQ 652
L C+
Sbjct: 700 LLSACK 705
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 147/568 (25%), Positives = 262/568 (46%), Gaps = 52/568 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE----PTQFTF-GGLLSCDSLNP 55
M +R+VV++ +++S R G D LR + M+ + P T GL +C L+
Sbjct: 175 MRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKARPNSRTMESGLEACGVLDE 234
Query: 56 V-EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+ G L +K G+ V +AL +Y + ++ S+F ++P K +V+W S++
Sbjct: 235 LNSGRCLHGYAVKVGVG-DSPMVISALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLIG 293
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
I+ G + + M LF E++ S + + ++ GL N ++ G+ H +++K F
Sbjct: 294 IYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFGD 353
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+LV N+L++MY + + +A ++F+ + RD SWN +I ++ K LELY M
Sbjct: 354 NVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGYCKAGCDVKCLELYREMQ 413
Query: 235 VDIVFP---NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
+ + + V I+SC+ L LG+S H IK+ L+ D V + L+ Y +C
Sbjct: 414 FRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCG 473
Query: 292 NLEGAHLCFSEISNK-NIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVL 349
+ A F K ++V+WN LI YA S T++ L ++L G PN T V+
Sbjct: 474 KFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVI 533
Query: 350 RSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+ L+ +H + MG++ + +L+ YAK
Sbjct: 534 SACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAK-------------------- 573
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
GQ ++ + + D+V+WN++I+ +G+ K+ LELF M
Sbjct: 574 ------------CGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGG 621
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIG 524
I P+ TF+++LSAC L G L + K + + + C ++D+ GK G +
Sbjct: 622 SIKPNGVTFLAILSACCHSGLLEEGRQLFTRMGKYSLEPNLKHYAC--MVDLLGKSGHLQ 679
Query: 525 SSVKIFNEM-TDRNVITWTALISALGLN 551
+ + M + + W L+SA L+
Sbjct: 680 EAEDMVLAMPVEPDGGIWGTLLSACKLH 707
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 148/351 (42%), Gaps = 39/351 (11%)
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS 323
+HA + + L + + LV Y+ A L FS + WN+LI + S
Sbjct: 31 VHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCASD 90
Query: 324 -PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGS 378
++ +L RP+ FT ++ L +H +R G
Sbjct: 91 FVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYG---------- 140
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
+ A++ VP++++ +Y R G + VKL ++ D+V+
Sbjct: 141 -----------------LLAVDGGSVAVPSSLVY-MYARCGVVRDAVKLFEEMRERDVVA 182
Query: 439 WNIVIAACAHNGD----YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
W V++ C NG+ + ++E+ + + P++ T S L AC L L G LH
Sbjct: 183 WTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKARPNSRTMESGLEACGVLDELNSGRCLH 242
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
G K + S V + L MY KC S + +F E+ +++V++WT+LI G
Sbjct: 243 GYAVKVGVGDS-PMVISALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLIGIYCWRGLI 301
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER-MNRSYG 604
+ A+E F+EM G +PD V + +L+ + G V G M R++G
Sbjct: 302 REAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFG 352
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 177/621 (28%), Positives = 308/621 (49%), Gaps = 36/621 (5%)
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
L + F + +GT ++ Y G D + V E + V WN ++ K G ++
Sbjct: 87 LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 146
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
+ + C ++R+ + V+ G HGL+ NGF+ + + N+LV M
Sbjct: 147 INVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAM 206
Query: 186 YFQCAGIWSAEKMFKDVEIR---DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
Y +C + A +F ++ R DV+SWN+I+ A +S N AL+L+ +M++ IV
Sbjct: 207 YSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTL-IVHEKP 265
Query: 243 T-------TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
T + V ++ +C L+ K +H I+N DVFVG+AL+D YAKC +E
Sbjct: 266 TNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMEN 325
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVL----R 350
A F+ + K++VSWNA++ GY+ + + F L + ++ P + T++ V+ +
Sbjct: 326 AVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQ 385
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP-AN 409
+ + L L +I G + S++++ A G S + A ++ ++ N
Sbjct: 386 RGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTE-IHAYSLKNCLLTLDN 444
Query: 410 IIAGIYNRTGQYNETVKLLSQ---------------LERPDIVSWNIVIAACAHNGDYKE 454
G YN + + S+ LE ++V+W ++I A GD +
Sbjct: 445 DFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSND 504
Query: 455 VLELFKYMRAAR--IYPDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCN 511
L+LF M + + P+ YT +L AC+ L + +G +H +++ SS FV N
Sbjct: 505 ALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVAN 564
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
LIDMY KCG + ++ +F+ M+ ++ I+WT++++ G++G AL+ F +M GF P
Sbjct: 565 CLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVP 624
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D + + VL AC H G+V +G+ F+ M+ YG+ P +HY C +DLL R G L +A +
Sbjct: 625 DDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRT 684
Query: 632 ITTMPFPPNALIWRTFLEGCQ 652
+ MP P A++W L C+
Sbjct: 685 VKDMPMEPTAVVWVALLSACR 705
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 228/503 (45%), Gaps = 89/503 (17%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-------CDSLNPV- 56
+V+S+NSI+SA+ + AL +F M E ++S C SL V
Sbjct: 230 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 289
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ ++ + ++NG F D FVG AL+ Y + G ++ V VF M K +V+WN++V+ +
Sbjct: 290 QTKEVHGNAIRNGTF-PDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGY 348
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE----------QDLEF------- 159
+ G E LF + + + L ++ VI G S + + F
Sbjct: 349 SQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNC 408
Query: 160 ------------------GEQIHGLVIKN----------GFDYELLVANSLVNMYFQCAG 191
G +IH +KN G D +L+V N+L++MY +C
Sbjct: 409 VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 468
Query: 192 IWSAEKMFKDV--EIRDVVSWNTIIGALAESENFGKALELYLRMSVDI--VFPNQTTFVY 247
+A +F D+ E R+VV+W +IG A+ + AL+L++ M + V PN T
Sbjct: 469 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 528
Query: 248 VINSCAGLQNSILGKSIHAKVIKNAL--ECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
++ +CA L +GK IHA V+++ FV + L+D Y+KC +++ A F +S
Sbjct: 529 ILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQ 588
Query: 306 KNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
K+ +SW +++ GY + ++ + ++ + G+ P++ TF VL + HC +
Sbjct: 589 KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYAC-------SHCGM 641
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
+ G ++ S+ Y GL A + A++ + R+G+ ++
Sbjct: 642 VDQGLSYFD----SMSADY---GLTPRAEHYACAID-------------LLARSGRLDKA 681
Query: 425 VKLLSQLE-RPDIVSWNIVIAAC 446
+ + + P V W +++AC
Sbjct: 682 WRTVKDMPMEPTAVVWVALLSAC 704
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR--GFEPTQFTFGG-LLSCDSLNPVE 57
+ +RNVV++ +I +++ G DAL++F+ MI+ G P +T L++C L +
Sbjct: 481 LEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIR 540
Query: 58 -GAQLQASVLKNGLFCADA-FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G Q+ A VL++ + + A FV L+ +Y + G +D VF+ M +KS ++W S+++
Sbjct: 541 IGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTG 600
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
+G HG + + +F ++ ++ + +F+ V++ S+
Sbjct: 601 YGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 638
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 175/616 (28%), Positives = 309/616 (50%), Gaps = 36/616 (5%)
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFC 130
F + +GT ++ Y G D + V E + V WN ++ K G ++ + + C
Sbjct: 47 FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 106
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
++R+ L + V+ G HGL+ NGF+ + + N+LV MY +C
Sbjct: 107 RMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 166
Query: 191 GIWSAEKMFKDVEIR---DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT---- 243
+ A +F ++ R DV+SWN+I+ A +S N AL+L+ +M++ IV T
Sbjct: 167 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTL-IVHEKPTNERS 225
Query: 244 ---TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ V ++ +C L+ K +H I+N DVFVG+AL+D YAKC +E A F
Sbjct: 226 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVF 285
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVL----RSSLAF 355
+ + K++VSWNA++ GY+ + + F L + ++ P + T++ V+ + +
Sbjct: 286 NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 345
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP-ANIIAGI 414
+ L + +I G + S++++ A G S + + A ++ ++ N G
Sbjct: 346 EALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGME-IHAYSLKNCLLTLDNDFGGE 404
Query: 415 YNRTGQYNETVKLLSQ---------------LERPDIVSWNIVIAACAHNGDYKEVLELF 459
YN + + S+ LE ++V+W ++I A GD + L+LF
Sbjct: 405 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLF 464
Query: 460 KYMRAAR--IYPDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDM 516
M + + P+ YT +L AC+ L + +G +H +++ + SS FV N LI+M
Sbjct: 465 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINM 524
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y KCG + ++ +F+ M+ ++ I+WT++++ G++G AL+ F +M GF PD +
Sbjct: 525 YSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF 584
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+ VL AC H G+V +G+ F+ M+ YG+ P +HY +DLL R+G L +A K + MP
Sbjct: 585 LVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMP 644
Query: 637 FPPNALIWRTFLEGCQ 652
P A++W L C+
Sbjct: 645 MEPTAVVWVALLSACR 660
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 137/594 (23%), Positives = 251/594 (42%), Gaps = 124/594 (20%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-------CDSLNPV- 56
+V+S+NSI+SA+ + AL +F M E ++S C SL V
Sbjct: 185 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 244
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ ++ + ++NG F D FVG AL+ Y + G ++ V VF M K +V+WN++V+ +
Sbjct: 245 QTKEVHGNAIRNGTFL-DVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGY 303
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE----------QDLEF------- 159
+ G + LF + + + L ++ VI G S + + F
Sbjct: 304 SQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNC 363
Query: 160 ------------------GEQIHGLVIKN----------GFDYELLVANSLVNMYFQCAG 191
G +IH +KN G D +L+V N+L++MY +C
Sbjct: 364 VTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 423
Query: 192 IWSAEKMFKDV--EIRDVVSWNTIIGALAESENFGKALELYLRMSVDI--VFPNQTTFVY 247
+A +F D+ E R+VV+W +IG A+ + AL+L++ M + V PN T
Sbjct: 424 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 483
Query: 248 VINSCAGLQNSILGKSIHAKVIKNAL--ECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
++ +CA L +GK IHA V+++ FV + L++ Y+KC +++ A F +S
Sbjct: 484 ILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQ 543
Query: 306 KNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
K+ +SW +++ GY + ++ + ++ + G+ P++ TF VL + HC
Sbjct: 544 KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYAC-------SHC-- 594
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
G++ L++ +++ + P R Y
Sbjct: 595 ----------------------GMVDQGLSYFDSMSADYGLTP---------RAEHYAYA 623
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+ LL++ R D + +K ++ + P +V+LLSAC
Sbjct: 624 IDLLARFGRLD---------------------KAWKTVKDMPMEPTAVVWVALLSACRVH 662
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
N+ L H L K E+ + + ++ ++Y G +I + M +
Sbjct: 663 SNVELAE--HALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGI 714
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR--GFEPTQFTFGG-LLSCDSLNPVE 57
+ +RNVV++ +I +++ G DAL++F+ MI+ G P +T L++C L +
Sbjct: 436 LEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIR 495
Query: 58 -GAQLQASVLKNGLFCADA-FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G Q+ A VL++ + + A FV L+ +Y + G +D VF+ M +KS ++W S+++
Sbjct: 496 IGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTG 555
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
+G HG + + +F ++ ++ + +F+ V++ S+
Sbjct: 556 YGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 593
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 194/685 (28%), Positives = 329/685 (48%), Gaps = 85/685 (12%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
N+++ AY CG + DA R+ I EP T +++ NG
Sbjct: 43 NTLLHAYFSCGALSDARRLLRADIK---EPNVITH-------------------NIMMNG 80
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
Y + G L + +F+ MPR+ + +WN+++S + + D + F
Sbjct: 81 ---------------YAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 130 CELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
+ RS +L + +F V+ E Q+ GL K F + V +LV+M+ +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185
Query: 189 CA-------------------------------GIWSAEKMFKDVEIRDVVSWNTIIGAL 217
C GI A + F+D+ RDVVSWN +I AL
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
++S +AL L + M V + TT+ + +CA L + GK +HAKVI++ + D
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG---YASKSSPTSIF--LLIE 332
+V SAL++ YAKC + + A F+ + ++N VSW LI G Y S +F + E
Sbjct: 306 YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAE 365
Query: 333 LLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
L+ + ++F + ++ L QLH L ++ G+ V SL++ YAK G
Sbjct: 366 LMAI----DQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGD 421
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
+ +A FV + R +V + Y++ G + + ++ + ++WN ++ A
Sbjct: 422 LQNA-EFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQ 480
Query: 449 NGDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
+G ++ L+++ M + + + PD T+V+L C+ + LG + G K +I +
Sbjct: 481 HGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLIL-NV 539
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
V N I MY KCG I + K+F+ + ++V++W A+I+ +G ++A + F +M
Sbjct: 540 SVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSK 599
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G KPD ++ +AVL+ C H GLV+EG F+ M R +G+ P ++H+ C+VDLL R GHL E
Sbjct: 600 GAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTE 659
Query: 628 AEKIITTMPFPPNALIWRTFLEGCQ 652
A+ +I MP P A +W L C+
Sbjct: 660 AKDLIDKMPMKPTAEVWGALLSACK 684
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 232/522 (44%), Gaps = 84/522 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
M +R+VVS+N +I+A S+ G V +AL + + M +G T+ L +C L + G
Sbjct: 230 MAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWG 289
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A V+++ L D +V +AL+ LY + G E VF + ++ V+W ++ +
Sbjct: 290 KQLHAKVIRS-LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQ 348
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + LF ++ +A+ + + +I G N DL G Q+H L +K+G + ++V
Sbjct: 349 YECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVV 408
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY-------- 230
+NSL+++Y +C + +AE +F + RD+VSW ++I A ++ N KA E +
Sbjct: 409 SNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNA 468
Query: 231 -------------------LRM-----SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
L+M S V P+ T+V + CA + + LG I
Sbjct: 469 ITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG 528
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPT 325
+K L +V V +A + Y+KC + A F ++ K++VSWNA+I GY+
Sbjct: 529 HTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 588
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAK 385
+ ++L G +P+ ++ VL + +
Sbjct: 589 AAKTFDDMLSKGAKPDYISYVAVL-------------------------------SGCSH 617
Query: 386 SGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWN 440
SGL+ + + + + P + + + R G E L+ ++ +P W
Sbjct: 618 SGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWG 677
Query: 441 IVIAACAHNGD-------YKEVLEL-----FKYMRAARIYPD 470
+++AC +G+ K V EL YM A+IY D
Sbjct: 678 ALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSD 719
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 173/352 (49%), Gaps = 22/352 (6%)
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
Q T ++ SC L ++ + + IK E +V + +++ YAK +L A F
Sbjct: 42 QNTLLHAYFSCGALSDA---RRLLRADIK---EPNVITHNIMMNGYAKQGSLSDAEELFD 95
Query: 302 EISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYR-PNEFTFSHVLRS-------S 352
+ +++ SWN L+ GY ++ + + + + G PN FTF V++S
Sbjct: 96 RMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRE 155
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
LA QLL L G + E +L+ + + G + A + + P +++A
Sbjct: 156 LAPQLLGLFWKFDFWGDPDVET---ALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLA 212
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
G Y + + ++ + D+VSWN++IAA + +G +E L L M + D+
Sbjct: 213 G-YAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 271
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T+ S L+AC++L +L G LH + ++ + D +V + LI++Y KCGS + ++FN
Sbjct: 272 TYTSSLTACARLFSLGWGKQLHAKVIRS-LPQIDPYVASALIELYAKCGSFKEAKRVFNS 330
Query: 533 MTDRNVITWTALI-SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ DRN ++WT LI +L F+ +++E F +M D+ AL +++ C
Sbjct: 331 LQDRNSVSWTVLIGGSLQYECFS-KSVELFNQMRAELMAIDQFALATLISGC 381
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 145/325 (44%), Gaps = 39/325 (12%)
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
LH ++ +G + ++ +L+ +Y G +SDA + A V+ NI+ Y + G
Sbjct: 26 LHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQG 85
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLL 478
++ +L ++ R D+ SWN +++ + + LE F M R+ P+ +TF ++
Sbjct: 86 SLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVM 145
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG----------------- 521
+C L L L GL K + D V L+DM+ +CG
Sbjct: 146 KSCGALGCRELAPQLLGLFWKFDFW-GDPDVETALVDMFVRCGYVDFASRLFSQIERPTI 204
Query: 522 --------------SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
I +++ F +M +R+V++W +I+AL +G + AL EM
Sbjct: 205 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 264
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHL 625
G + D + LTAC + G +L ++ RS P++D Y +++L + G
Sbjct: 265 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL---PQIDPYVASALIELYAKCGSF 321
Query: 626 KEAEKIITTMPFPPNALIWRTFLEG 650
KEA+++ ++ N++ W + G
Sbjct: 322 KEAKRVFNSLQ-DRNSVSWTVLIGG 345
>gi|125563707|gb|EAZ09087.1| hypothetical protein OsI_31353 [Oryza sativa Indica Group]
Length = 810
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 188/660 (28%), Positives = 328/660 (49%), Gaps = 55/660 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQAS 64
+ V +N+ +S R G A+ MF M+ EP FT+ G LS + G +L
Sbjct: 134 SAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACA----AGEELSVG 189
Query: 65 VLKNGLFCA-----DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+GL D FVGT+L+ +Y + G + + F MP +++V+W + ++
Sbjct: 190 RAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIA----- 244
Query: 120 GFVED-----CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
GFV+D M L E+VR+ VA+ + + ++ + + QIHG+V+K
Sbjct: 245 GFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYL 304
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ +V +L++ Y I +EK+F++ + + W+ I ++ + + ++++L RM
Sbjct: 305 DCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRM 363
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ PN + V +S ++ G +H+ IK + VGSAL Y++CDN+
Sbjct: 364 FHQGLRPNDKCYASVFSSVNSIE---FGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNV 420
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSS 352
+ ++ F E+ ++ VSW A++ G+A+ FL + L G++P+ + + +L +
Sbjct: 421 QDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSA- 479
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ CL+ G E V G + Y ++ I+D F++
Sbjct: 480 ----CNRSECLL--KGKE----VHGHTLRVYGETTFINDC--FIS--------------- 512
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y++ ++ D V W+ +I+ A NG +E + LF+ M AA I D+Y
Sbjct: 513 -MYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSY 571
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
S+LS C+ + LHG K I+S D V + L+ +Y + G++ S K+F+E
Sbjct: 572 ICSSILSLCADIARPFYCKPLHGYAIKAGILS-DQSVSSSLVKVYSRSGNMDDSRKVFDE 630
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
++ +++ WT +I +G +Q AL F M LG +PD V L++VL+AC GLV +G
Sbjct: 631 ISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQG 690
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M +YGVEPE+ HY C+VDLL R G L EA+ + +MP P+ ++W T + C+
Sbjct: 691 FNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAACR 750
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 151/628 (24%), Positives = 283/628 (45%), Gaps = 65/628 (10%)
Query: 39 PTQFTFGGLLSCDSLNPVEGA--QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS 96
P+QF++G L+ + P Q+ + K+GL +A+V T ++ L + G L + +
Sbjct: 67 PSQFSYGNALAACARAPAPALAEQVYCAAWKDGL-SGNAYVCTGMVDLLAKSGRLRDALR 125
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF D S V WN+ VS ++G + +F ++V ++ G + + ++
Sbjct: 126 VFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEE 185
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L G +HGLV++ +Y++ V SLVNMY +C + +A + F + +R+VVSW T I
Sbjct: 186 LSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAG 245
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ + A+ L M + V N+ T ++ +CA + IH V+K + D
Sbjct: 246 FVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLD 305
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSE---ISNKNIVSWNALILGYASKSSPTSIFLLIEL 333
V AL+ Y +E + F E +SN++I W+A I G ++ S S+ LL +
Sbjct: 306 CVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISGVSNHSLLRSVQLLRRM 363
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
G RPN+ ++ V S + + G L +S K G I
Sbjct: 364 FHQGLRPNDKCYASVFSSVNSIEF------------------GGQLHSSAIKEGFI---- 401
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
++ + ++ +Y+R ++ K+ +++ D VSW ++A A +G
Sbjct: 402 ---------HGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSV 452
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
E F+ M PD+ + ++LSAC++ L G +HG + TF+ +
Sbjct: 453 EAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHG--HTLRVYGETTFINDCF 510
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
I MY KC + ++ +IF+ ++ + W+++IS NG + A+ F+ M + D
Sbjct: 511 ISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDS 570
Query: 574 VALIAVLTACR-----------HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
++L+ C HG ++ G+ + ++ S +V + R
Sbjct: 571 YICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSS------------LVKVYSRS 618
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEG 650
G++ ++ K+ + P+ + W T ++G
Sbjct: 619 GNMDDSRKVFDEISV-PDLVAWTTIIDG 645
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 103/219 (47%), Gaps = 5/219 (2%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGA 59
P ++ V ++S+IS Y+ G E+A+ +F M+ + +LS D P
Sbjct: 531 PCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCK 590
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
L +K G+ +D V ++L+ +Y R G +D+ VF+++ LV W +I+ + +H
Sbjct: 591 PLHGYAIKAGIL-SDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQH 649
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG-EQIHGLVIKNGFDYELLV 178
G ++ + +F +V+ V V V+ S +E G + + G + EL
Sbjct: 650 GSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQH 709
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
+V++ + + A+ + ++ D++ W+T++ A
Sbjct: 710 YCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAA 748
>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
Length = 1347
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 183/646 (28%), Positives = 328/646 (50%), Gaps = 52/646 (8%)
Query: 19 CGYVEDALRMFLYMINRGFEPTQFTFGGLL-----SCDSLNPVEGAQLQASVLKNGLFCA 73
C ++ A+ ++ +++ + ++F F +L S + L+ G ++ ++K+G+
Sbjct: 636 CHLLDAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSV--GRKVHGRIIKSGVD-D 692
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
DA + T+LL +YG+ G L + VF+ MP + LV W+++VS ++ V + +F +V
Sbjct: 693 DAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMV 752
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
V + + V+ G + L +HG + + FD++ + NSL+ MY +C +
Sbjct: 753 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLL 812
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
S+EK+F+ + ++ VSW +I + E KAL + M + PN T +++SC
Sbjct: 813 SSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSC- 871
Query: 254 GLQNSIL-GKSIHAKVIKNALECDV-FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
GL I GKS+H I+ L+ + + ALV+ YA+C L + ++NIV W
Sbjct: 872 GLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLW 931
Query: 312 NALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIR 366
N+ I YA + ++ L +++ +P+ FT + ++ + L+ Q+H +IR
Sbjct: 932 NSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIR 991
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
+ E+V S++ Y+KSG + N
Sbjct: 992 TDVSD-EFVQNSVIDMYSKSGFV--------------------------------NLACT 1018
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+ Q++ IV+WN ++ + NG+ E + LF YM + + + TF++++ ACS + +
Sbjct: 1019 VFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGS 1078
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L G +H + I D F LIDMY KCG + ++ +F M++R++++W+++I+
Sbjct: 1079 LEKGRWVHHKLIVCGI--KDLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMIN 1136
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
A G++G A+ F +M G KP+ V + VL+AC H G V EG F M + +GV
Sbjct: 1137 AYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KLFGVS 1195
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
P +H+ C +DLL R G LKEA + I MPF +A +W + + GC+
Sbjct: 1196 PNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCR 1241
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 163/594 (27%), Positives = 283/594 (47%), Gaps = 45/594 (7%)
Query: 49 SCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVT 108
SC SL V +QL A +L G D T L+ Y G D VFE P
Sbjct: 568 SCSSLRLV--SQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFM 625
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD-LEFGEQIHGLV 167
+ ++ ++ + L+ LV + +++ F V+ + ++ L G ++HG +
Sbjct: 626 YGVLIKCNVWCHLLDAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRI 685
Query: 168 IKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKAL 227
IK+G D + ++ SL+ MY Q + AEK+F + +RD+V+W+T++ + E+ KAL
Sbjct: 686 IKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKAL 745
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
++ M D V P+ T + V+ CA L + +S+H ++ + + D + ++L+ Y
Sbjct: 746 RMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMY 805
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFS 346
+KC +L + F +I+ KN VSW A+I Y + S ++ E+L+ G PN T
Sbjct: 806 SKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLY 865
Query: 347 HVLRS----SLAFQLLQLHCLIIRMGYE-NYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
+L S L + +H IR + NYE + +L+ YA+ G + D
Sbjct: 866 SILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDC--------- 916
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
I + G N IV WN I+ AH G E L LF+
Sbjct: 917 ----------ETILHVVGDRN-------------IVLWNSHISLYAHRGMVIEALCLFRQ 953
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M RI PD++T S++SAC + LG +HG + +T++ SD FV N +IDMY K G
Sbjct: 954 MVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDV--SDEFVQNSVIDMYSKSG 1011
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ + +F+++ R+++TW +++ NG + A+ F M + ++V +AV+
Sbjct: 1012 FVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQ 1071
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
AC G + +G + ++ G++ ++ ++D+ + G L AE + M
Sbjct: 1072 ACSSIGSLEKGRWVHHKLIVC-GIK-DLFTDTALIDMYAKCGDLNTAETVFRAM 1123
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 187/349 (53%), Gaps = 5/349 (1%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGAQL 61
+N VS+ ++IS+Y+R + E ALR F M+ G EP T +LS LN + EG +
Sbjct: 824 KNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSV 883
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
++ L + AL+ LY G L + ++ + +++V WNS +S++ G
Sbjct: 884 HGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGM 943
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
V + + LF ++V + + +I N + G+QIHG VI+ E V NS
Sbjct: 944 VIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDVSDEF-VQNS 1002
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
+++MY + + A +F ++ R +V+WN+++ +++ N +A+ L+ M + N
Sbjct: 1003 VIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEIN 1062
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ TF+ VI +C+ + + G+ +H K+I ++ D+F +AL+D YAKC +L A F
Sbjct: 1063 KVTFLAVIQACSSIGSLEKGRWVHHKLIVCGIK-DLFTDTALIDMYAKCGDLNTAETVFR 1121
Query: 302 EISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL 349
+SN++IVSW+++I Y ++I ++++ G +PNE F +VL
Sbjct: 1122 AMSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVL 1170
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 243/499 (48%), Gaps = 16/499 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP R++V++++++S+ V ALRMF M++ G EP T ++ C L + A
Sbjct: 720 MPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIA 779
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + +F D + +LL +Y + G L +FE + +K+ V+W +++S + +
Sbjct: 780 RSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRG 839
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD--YELL 177
F E + F E+++S + + ++ + G+ +HG I+ D YE L
Sbjct: 840 EFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESL 899
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ +LV +Y +C + E + V R++V WN+ I A +AL L+ +M
Sbjct: 900 -SPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWR 958
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P+ T +I++C LGK IH VI+ + D FV ++++D Y+K + A
Sbjct: 959 IKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDVS-DEFVQNSVIDMYSKSGFVNLAC 1017
Query: 298 LCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F +I +++IV+WN+++ G++ +S +I L + N+ TF V+++ +
Sbjct: 1018 TVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIG 1077
Query: 357 LLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L+ +H +I G ++ + +L+ YAK G ++ A A++ R++V + +
Sbjct: 1078 SLEKGRWVHHKLIVCGIKDL-FTDTALIDMYAKCGDLNTAETVFRAMS-NRSIVSWSSMI 1135
Query: 413 GIYNRTGQYNETVKLLSQL----ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
Y G+ + +Q+ +P+ V + V++AC H+G +E F M+ +
Sbjct: 1136 NAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKLFGVS 1195
Query: 469 PDNYTFVSLLSACSKLCNL 487
P++ F + S+ +L
Sbjct: 1196 PNSEHFACFIDLLSRSGDL 1214
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 179/366 (48%), Gaps = 23/366 (6%)
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
AHL + ++ + LI YA SP S L+ E P+ F + +++ ++
Sbjct: 580 AHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPY---PDSFMYGVLIKCNVWC 636
Query: 356 QLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
LL L+ ++ + ++V S++ + A S V I V +I
Sbjct: 637 HLLDAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVI 696
Query: 412 AG----IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+Y +TG ++ K+ + D+V+W+ ++++C N + + L +FK M +
Sbjct: 697 ETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGV 756
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD T +S++ C++L L + S+HG I + ++ D +CN L+ MY KCG + SS
Sbjct: 757 EPDAVTMISVVEGCAELGCLRIARSVHGQITR-KMFDFDETLCNSLLTMYSKCGDLLSSE 815
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
KIF ++ +N ++WTA+IS+ F+++AL F EM G +P+ V L ++L++C G
Sbjct: 816 KIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNG 875
Query: 588 LVREGMELFERMNRSYGVEPEMDHYH-----CVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
L+REG + + + E+D + +V+L G L + E I+ + N +
Sbjct: 876 LIREGKSV-----HGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVG-DRNIV 929
Query: 643 IWRTFL 648
+W + +
Sbjct: 930 LWNSHI 935
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M +R++VS++S+I+AY G + A+ F M+ G +P + F +LS C VE
Sbjct: 1123 MSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEG 1182
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVS 114
+ +++K ++ + L R G L E ++MP W S+V+
Sbjct: 1183 KYYFNLMKLFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVN 1238
>gi|46403989|gb|AAS93059.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 810
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 188/660 (28%), Positives = 328/660 (49%), Gaps = 55/660 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQAS 64
+ V +N+ +S R G A+ MF M+ EP FT+ G LS + G +L
Sbjct: 134 SAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACA----AGEELSVG 189
Query: 65 VLKNGLFCA-----DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+GL D FVGT+L+ +Y + G + + F MP +++V+W + ++
Sbjct: 190 RAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIA----- 244
Query: 120 GFVED-----CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
GFV+D M L E+VR+ VA+ + + ++ + + QIHG+V+K
Sbjct: 245 GFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYL 304
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ +V +L++ Y I +EK+F++ + + W+ I ++ + + ++++L RM
Sbjct: 305 DCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRM 363
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ PN + V +S ++ G +H+ IK + VGSAL Y++CDN+
Sbjct: 364 FHQGLRPNDKCYASVFSSVNSIE---FGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNV 420
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSS 352
+ ++ F E+ ++ VSW A++ G+A+ FL + L G++P+ + + +L +
Sbjct: 421 QDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSA- 479
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ CL+ G E V G + Y ++ I+D F++
Sbjct: 480 ----CNRSECLL--KGKE----VHGHTLRVYGETTFINDC--FIS--------------- 512
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y++ ++ D V W+ +I+ A NG +E + LF+ M AA I D+Y
Sbjct: 513 -MYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSY 571
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
S+LS C+ + LHG K I+S D V + L+ +Y + G++ S K+F+E
Sbjct: 572 ICSSILSLCADIARPFYCKPLHGYAIKAGILS-DQSVSSSLVKVYSRSGNMDDSRKVFDE 630
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
++ +++ WT +I +G +Q AL F M LG +PD V L++VL+AC GLV +G
Sbjct: 631 ISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQG 690
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M +YGVEPE+ HY C+VDLL R G L EA+ + +MP P+ ++W T + C+
Sbjct: 691 FNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAACR 750
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 151/628 (24%), Positives = 283/628 (45%), Gaps = 65/628 (10%)
Query: 39 PTQFTFGGLLSCDSLNPVEGA--QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS 96
P+QF++G L+ + P Q+ + K+GL +A+V T ++ L + G L + +
Sbjct: 67 PSQFSYGNALAACARAPAPALAEQVYCAAWKDGL-SGNAYVCTGMVDLLAKSGRLRDALR 125
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF D S V WN+ VS ++G + +F ++V ++ G + + ++
Sbjct: 126 VFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEE 185
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L G +HGLV++ +Y++ V SLVNMY +C + +A + F + +R+VVSW T I
Sbjct: 186 LSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAG 245
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ + A+ L M + V N+ T ++ +CA + IH V+K + D
Sbjct: 246 FVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLD 305
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSE---ISNKNIVSWNALILGYASKSSPTSIFLLIEL 333
V AL+ Y +E + F E +SN++I W+A I G ++ S S+ LL +
Sbjct: 306 CVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFISGVSNHSLLRSVQLLRRM 363
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
G RPN+ ++ V S + + G L +S K G I
Sbjct: 364 FHQGLRPNDKCYASVFSSVNSIEF------------------GGQLHSSAIKEGFI---- 401
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
++ + ++ +Y+R ++ K+ +++ D VSW ++A A +G
Sbjct: 402 ---------HGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSV 452
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
E F+ M PD+ + ++LSAC++ L G +HG + TF+ +
Sbjct: 453 EAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHG--HTLRVYGETTFINDCF 510
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
I MY KC + ++ +IF+ ++ + W+++IS NG + A+ F+ M + D
Sbjct: 511 ISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDS 570
Query: 574 VALIAVLTACR-----------HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
++L+ C HG ++ G+ + ++ S +V + R
Sbjct: 571 YICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSS------------LVKVYSRS 618
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEG 650
G++ ++ K+ + P+ + W T ++G
Sbjct: 619 GNMDDSRKVFDEISV-PDLVAWTTIIDG 645
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 103/219 (47%), Gaps = 5/219 (2%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGA 59
P ++ V ++S+IS Y+ G E+A+ +F M+ + +LS D P
Sbjct: 531 PCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCK 590
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
L +K G+ +D V ++L+ +Y R G +D+ VF+++ LV W +I+ + +H
Sbjct: 591 PLHGYAIKAGIL-SDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQH 649
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG-EQIHGLVIKNGFDYELLV 178
G ++ + +F +V+ V V V+ S +E G + + G + EL
Sbjct: 650 GSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQH 709
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
+V++ + + A+ + ++ D++ W+T++ A
Sbjct: 710 YCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAA 748
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 174/596 (29%), Positives = 303/596 (50%), Gaps = 35/596 (5%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
QL A ++ +G F+ L+ Y G + F+ + K + TWNS++S + +
Sbjct: 61 QLHALLVVSGK-TQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARI 119
Query: 120 GFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + F E + + ++ +F VI N D G ++H LV+K GF+ ++ +
Sbjct: 120 GHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLGFECDVYI 176
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
A S ++ Y + + A +F ++ IRD+ +WN +I + +ALE++ M V
Sbjct: 177 AASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSV 236
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ T ++ C L + I G IH IK LE D+FV +AL++ YAK L A
Sbjct: 237 SMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAET 296
Query: 299 CFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+++ ++IVSWN+L+ + P ++ + ++ +G P+ T V +S+A +L
Sbjct: 297 IFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTL--VSLASVAAEL 354
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
G+ ++S + G ++ F+ + + N I +Y +
Sbjct: 355 -------------------GNFLSSRSIHGFVTRRCWFLHDIAL------GNAIIDMYAK 389
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA-ARIYPDNYTFVS 476
G + K+ L D++SWN +I + NG E ++++ MR + P+ T+VS
Sbjct: 390 LGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVS 449
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+L+A S+L L G HG + K + D FV L+DMYGKCG + ++ +F E+ +
Sbjct: 450 ILTAHSQLGALKQGMKAHGQLIKN-FLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQ 508
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+ ++W A+IS GL+G+ +A++ F+EM+ G KPD + +++L+AC H GLV EG F
Sbjct: 509 SSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCF 568
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ M +YG+ P + HY C+VDL R GHL++A + MP P+ +W L C+
Sbjct: 569 QLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACR 624
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 147/551 (26%), Positives = 273/551 (49%), Gaps = 39/551 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGF-EPTQFTFGGLL-SCDSLNPVEGAQL 61
++V ++NS+ISAY+R G+ A+ F ++ F + +TF ++ +C +L+ +G ++
Sbjct: 104 KDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLD--DGRKV 161
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
VLK G C D ++ + + Y R G + ++F++M + + TWN+++S F +G
Sbjct: 162 HCLVLKLGFEC-DVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGK 220
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
V + + +F E+ V++ + ++ D+ G IH IK G +++L V N+
Sbjct: 221 VAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNA 280
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+NMY + + SAE +F +++RD+VSWN+++ A +++ AL +Y +M V P+
Sbjct: 281 LINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPD 340
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLEGAHLCF 300
T V + + A L N + +SIH V + D+ +G+A++D YAK ++ A F
Sbjct: 341 LLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVF 400
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL--GYRPNEFTFSHVLRSSLAFQLL 358
+ K+++SWN+LI GY+ + ++ G PN+ T+ +L +
Sbjct: 401 EGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTA------- 453
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSG-LISDALAFVTALNIPRAVVPANIIAGIYNR 417
LG+L G LI + L F + + + +Y +
Sbjct: 454 --------------HSQLGALKQGMKAHGQLIKNFLYF--------DIFVSTCLVDMYGK 491
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G+ + + L ++ VSWN +I+ +G + ++LFK M++ + PD+ TFVSL
Sbjct: 492 CGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSL 551
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR- 536
LSACS + G L+++T I ++D++G+ G + + M R
Sbjct: 552 LSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRP 611
Query: 537 NVITWTALISA 547
+V W AL+ A
Sbjct: 612 DVSVWGALLGA 622
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 232/483 (48%), Gaps = 35/483 (7%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
+ +Q+H L++ +G + ++ L+N Y I A F ++ +DV +WN++I A
Sbjct: 56 VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115
Query: 217 LAESENFGKALELYLR-MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
A +F A++ + +S + + TF VI +C L + G+ +H V+K EC
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLGFEC 172
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
DV++ ++ + FY++ + A F + ++I +WNA+I G+ + E L+
Sbjct: 173 DVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGK------VAEALE 226
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALA 394
+ +E F V S+ L C+ + + + G L+ YA K GL D
Sbjct: 227 VF---DEMRFKSVSMDSVTISSLLPICVQLD------DIISGVLIHVYAIKLGLEFDLFV 277
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
N + +Y + G+ + +Q++ DIVSWN ++AA N
Sbjct: 278 -------------CNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVI 324
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
L ++ M + + PD T VSL S ++L N S+HG + + D + N +I
Sbjct: 325 ALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAII 384
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL-GFKPDR 573
DMY K G I S+ K+F + ++VI+W +LI+ NG A A++ + M + G P++
Sbjct: 385 DMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQ 444
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
+++LTA G +++GM+ ++ +++ + ++ C+VD+ + G L +A +
Sbjct: 445 GTWVSILTAHSQLGALKQGMKAHGQLIKNF-LYFDIFVSTCLVDMYGKCGKLADALSLFY 503
Query: 634 TMP 636
+P
Sbjct: 504 EVP 506
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 132/256 (51%), Gaps = 3/256 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
M R++VS+NS+++A+ + AL ++ M + G P T L S + N +
Sbjct: 301 MKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSS 360
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V + F D +G A++ +Y + G +D VFE +P K +++WNS+++ + +
Sbjct: 361 RSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQ 420
Query: 119 HGFVEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G + + ++ + S + ++V ++ S L+ G + HG +IKN +++
Sbjct: 421 NGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIF 480
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V+ LV+MY +C + A +F +V + VSWN II KA++L+ M +
Sbjct: 481 VSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEG 540
Query: 238 VFPNQTTFVYVINSCA 253
V P+ TFV ++++C+
Sbjct: 541 VKPDHITFVSLLSACS 556
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 177/621 (28%), Positives = 307/621 (49%), Gaps = 36/621 (5%)
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
L + F + +GT ++ Y G D + V E + V WN ++ K G ++
Sbjct: 80 LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 139
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
+ + C ++R+ + V+ G HGL+ NGF+ + + N+LV M
Sbjct: 140 INVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAM 199
Query: 186 YFQCAGIWSAEKMFKDVEIR---DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
Y +C + A +F ++ R DV+SWN+I+ A +S N AL+L+ +M++ IV
Sbjct: 200 YSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTL-IVHEKP 258
Query: 243 T-------TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
T + V ++ +C L+ K +H I+N DVFVG+AL+D YAKC +E
Sbjct: 259 TNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMEN 318
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVL----R 350
A F+ + K++VSWNA++ GY+ + + F L + ++ P + T++ V+ +
Sbjct: 319 AVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQ 378
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP-AN 409
+ + L L +I G + S++++ A G S + A ++ ++ N
Sbjct: 379 RGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTE-IHAYSLKNCLLTLDN 437
Query: 410 IIAGIYNRTGQYNETVKLLSQ---------------LERPDIVSWNIVIAACAHNGDYKE 454
G YN + + S+ LE ++V+W ++I A GD +
Sbjct: 438 DFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSND 497
Query: 455 VLELFKYM--RAARIYPDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCN 511
L+LF M + P+ YT +L AC+ L + +G +H +++ SS FV N
Sbjct: 498 ALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVAN 557
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
LIDMY KCG + ++ +F+ M+ ++ I+WT++++ G++G AL+ F +M GF P
Sbjct: 558 CLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVP 617
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D + + VL AC H G+V +G+ F+ M+ YG+ P +HY C +DLL R G L +A +
Sbjct: 618 DDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRT 677
Query: 632 ITTMPFPPNALIWRTFLEGCQ 652
+ MP P A++W L C+
Sbjct: 678 VKDMPMEPTAVVWVALLSACR 698
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 228/503 (45%), Gaps = 89/503 (17%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-------CDSLNPV- 56
+V+S+NSI+SA+ + AL +F M E ++S C SL V
Sbjct: 223 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 282
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ ++ + ++NG F D FVG AL+ Y + G ++ V VF M K +V+WN++V+ +
Sbjct: 283 QTKEVHGNAIRNGTF-PDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGY 341
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE----------QDLEF------- 159
+ G E LF + + + L ++ VI G S + + F
Sbjct: 342 SQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNC 401
Query: 160 ------------------GEQIHGLVIKN----------GFDYELLVANSLVNMYFQCAG 191
G +IH +KN G D +L+V N+L++MY +C
Sbjct: 402 VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 461
Query: 192 IWSAEKMFKDV--EIRDVVSWNTIIGALAESENFGKALELYLRMSVDI--VFPNQTTFVY 247
+A +F D+ E R+VV+W +IG A+ + AL+L++ M + V PN T
Sbjct: 462 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 521
Query: 248 VINSCAGLQNSILGKSIHAKVIKNAL--ECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
++ +CA L +GK IHA V+++ FV + L+D Y+KC +++ A F +S
Sbjct: 522 ILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQ 581
Query: 306 KNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
K+ +SW +++ GY + ++ + ++ + G+ P++ TF VL + HC +
Sbjct: 582 KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYAC-------SHCGM 634
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
+ G ++ S+ Y GL A + A++ + R+G+ ++
Sbjct: 635 VDQGLSYFD----SMSADY---GLTPRAEHYACAID-------------LLARSGRLDKA 674
Query: 425 VKLLSQLE-RPDIVSWNIVIAAC 446
+ + + P V W +++AC
Sbjct: 675 WRTVKDMPMEPTAVVWVALLSAC 697
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR--GFEPTQFTFGG-LLSCDSLNPVE 57
+ +RNVV++ +I +++ G DAL++F+ MI+ G P +T L++C L +
Sbjct: 474 LEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIR 533
Query: 58 -GAQLQASVLKNGLFCADA-FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G Q+ A VL++ + + A FV L+ +Y + G +D VF+ M +KS ++W S+++
Sbjct: 534 IGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTG 593
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
+G HG + + +F ++ ++ + +F+ V++ S+
Sbjct: 594 YGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 631
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 178/620 (28%), Positives = 305/620 (49%), Gaps = 34/620 (5%)
Query: 37 FEPTQFTFGGLLS-CDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEV 94
F+P F LL C S V+ G ++ V G F + V L+ +Y + G + E
Sbjct: 1 FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRG-FEQNNLVCGHLIQMYAQCGSVPEA 59
Query: 95 VSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE 154
VFE + RK + W ++ I+ + G + + +F ++ +V T+ ++V +++ ++
Sbjct: 60 QQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAST 119
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+ L+ G +IHG +++ GF+ ++ V +L+NMY +C + A FK +E RDVVSW +I
Sbjct: 120 ESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI 179
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
A + + F A LY RM +D V PN+ T V N+ GK I++ V +E
Sbjct: 180 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVME 239
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIEL 333
DV V ++ ++ + L A F ++ ++++V+WN +I Y + ++ L L
Sbjct: 240 SDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRL 299
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
Q G + N+ TF +L V SL TS AK +I +
Sbjct: 300 QQDGIKANDITFVLMLN------------------------VYTSL-TSLAKGKVIHE-- 332
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
V R VV A + +Y R + K+ + D+++W ++ A A NG K
Sbjct: 333 -LVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRK 391
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
E L+LF+ M+ P + T V++L C+ L L G +H I + + V L
Sbjct: 392 EALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENG-FRMEMVVETAL 450
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
I+MYGKCG + + +F +M R+++ W +++ A +G+ L+ F +M+ G K D
Sbjct: 451 INMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADA 510
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
V+ ++VL+A H G V +G + F M + + + P + Y CVVDLL R G ++EA I+
Sbjct: 511 VSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVL 570
Query: 634 TMP-FPPNALIWRTFLEGCQ 652
+ P+ ++W T L C+
Sbjct: 571 KLSGCLPDGILWMTLLGACR 590
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 156/618 (25%), Positives = 286/618 (46%), Gaps = 52/618 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQL 61
++V ++ +I Y + G + AL MF M PT+ T+ +L +C S + +G ++
Sbjct: 69 KDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEI 128
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+L+ G F D FVGTAL+ +Y + G + F+ + + +V+W ++++ +H
Sbjct: 129 HGQILQQG-FEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQ 187
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+L+ + V + + V + + L G+ I+ LV + ++ V NS
Sbjct: 188 FALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNS 247
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
+NM+ + A ++F+D+ RDVV+WN +I ++ENFG+A+ L+ R+ D + N
Sbjct: 248 AMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKAN 307
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TFV ++N L + GK IH V + + DV V +AL+ Y +C+ A F
Sbjct: 308 DITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFV 367
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL-- 358
++ +K++++W + + YA L + +QL G RP T VL + L
Sbjct: 368 DMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQK 427
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
Q+H II G+ V +L+ Y K G +++A + + R ++ N + G Y
Sbjct: 428 GRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKM-AKRDILVWNSMLGAYA 486
Query: 417 RTGQYNETVKLLSQL----ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+ G Y+ET++L +Q+ E+ D VS+ V++A +H+G V + ++Y
Sbjct: 487 QHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSG---SVTDGYQY----------- 532
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
FV++L S + L+G + +D+ G+ G I +V I +
Sbjct: 533 -FVAMLQDFS----ITPTPELYGCV----------------VDLLGRAGRIQEAVDIVLK 571
Query: 533 MTD--RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
++ + I W L+ A + +A K + L P VL+
Sbjct: 572 LSGCLPDGILWMTLLGACRTHNKTDQA--KAAAEQVLERDPSHSGAYVVLSNVYAAAGDW 629
Query: 591 EGMELFERMNRSYGVEPE 608
+G+ ++ RS GV+ E
Sbjct: 630 DGVNRMRKLMRSRGVKKE 647
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 139/252 (55%), Gaps = 1/252 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPVEGA 59
M DR+VV++N +I+ Y + +A+R+F + G + TF +L+ SL +
Sbjct: 268 MVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKG 327
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ ++K + D V TAL+ LYGR + +F DM K ++TW + + ++
Sbjct: 328 KVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQN 387
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
GF ++ + LF E+ T ++ V V+ ++ L+ G QIH +I+NGF E++V
Sbjct: 388 GFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVE 447
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+L+NMY +C + A +F+ + RD++ WN+++GA A+ + + L+L+ +M +D
Sbjct: 448 TALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEK 507
Query: 240 PNQTTFVYVINS 251
+ +FV V+++
Sbjct: 508 ADAVSFVSVLSA 519
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M ++V+++ + AY++ G+ ++AL++F M G PT T +L +C L ++ G
Sbjct: 369 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKG 428
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + +++NG F + V TAL+ +YG+ G + E SVFE M ++ ++ WNS++ + +
Sbjct: 429 RQIHSHIIENG-FRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQ 487
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ 162
HG+ ++ + LF ++ SFV V+ LS+ + G Q
Sbjct: 488 HGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQ 531
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 188/633 (29%), Positives = 316/633 (49%), Gaps = 58/633 (9%)
Query: 43 TFGGLLS-CDSLNPVEGAQ-----LQASVL-KNGLFCADAFVGTALLGLYGRHGCLDEVV 95
++G +L C + +EG + ++AS L ++G+ D +G L+ +Y + G L+
Sbjct: 93 SYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGM---DNVLGQKLVLMYLKCGDLENAR 149
Query: 96 SVFEDMPRKSLV-TWNSIVSIFGKHGFVEDCMFLF----CELVRSEVALTESSFVGVIHG 150
VF++MP+ S V W +++S + K G + + + LF C VR + A T S + I G
Sbjct: 150 RVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPD-AYTISCVLKCIAG 208
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
L + +D GE +HGL+ K GF + V N+L+ Y + A +F + RDV+SW
Sbjct: 209 LGSIED---GEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISW 265
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
N++I + + KA+EL++RM ++ + T + V+ +CA L LG+ +H +K
Sbjct: 266 NSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVK 325
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLL 330
+ + L+D Y+ C + + F + KN+VSW A+I Y + L
Sbjct: 326 TGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGL 385
Query: 331 IELLQL-GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAK 385
+ + L G RP+ F + L + +LL+ +H IR G E V +LM Y K
Sbjct: 386 FQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVK 445
Query: 386 SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA 445
G + +A I G+ ++ D++SWN +I
Sbjct: 446 CGNMEEAKL---------------IFDGVVSK-----------------DMISWNTLIGG 473
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
+ N E LF M ++ P+ T +L A + L +L G +H + +
Sbjct: 474 YSRNNLANEAFSLFTEM-LLQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLED 532
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
D FV N LIDMY KCG++ + ++F+ ++++N+I+WT +++ G++G + A+ F +M
Sbjct: 533 D-FVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMR 591
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G PD + A+L AC H GL EG F+ M + + +EP + HY C+VDLL+ G+L
Sbjct: 592 VSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNL 651
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQRCRIAK 658
KEA + I +MP P++ IW + L GC+ R K
Sbjct: 652 KEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVK 684
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/575 (24%), Positives = 268/575 (46%), Gaps = 42/575 (7%)
Query: 1 MPD-RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPVEG 58
MP +V + +++S Y++ G + + + +F M G P +T +L C L +E
Sbjct: 155 MPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIED 214
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ +L+ F + VG AL+ Y + + + VF+ MP + +++WNS++S
Sbjct: 215 GEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTS 274
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + LF + L ++ + V+ + L G +HG +K GF + +
Sbjct: 275 NGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSL 334
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN L++MY C+ S K+F+++ ++VVSW +I + + + K L+ M ++
Sbjct: 335 ANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGT 394
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ +++ AG + GKS+H I+N +E + V +AL++ Y KC N+E A L
Sbjct: 395 RPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKL 454
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F + +K+++SWN LI GY+ + F L + L RPN T + +L ++ + L
Sbjct: 455 IFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLRPNAVTMTCILPAAASLSSL 514
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
++H +R GY ++V +L+ Y K G AL + R
Sbjct: 515 ERGREMHAYALRRGYLEDDFVANALIDMYVKCG----------ALLLAR----------- 553
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+L +L +++SW I++A +G ++ + LF+ MR + I PD +F
Sbjct: 554 -----------RLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASF 602
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
++L ACS G ++K I ++D+ G++ + + + M
Sbjct: 603 SAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMP 662
Query: 535 -DRNVITWTALISALGLN---GFAQRALEKFREME 565
+ + W +L+ ++ A+ E+ E+E
Sbjct: 663 IEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELE 697
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 178/612 (29%), Positives = 300/612 (49%), Gaps = 67/612 (10%)
Query: 51 DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVV---SVFEDMPRKSLV 107
DS + G + ++ NG + DA++ T +L LY R GCLD++ +FE+MP ++L
Sbjct: 83 DSNSFQRGKSIHTQMISNG-YNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLT 141
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLV 167
WN+++ + + + +F +++ V +F + + + G+Q+H +
Sbjct: 142 AWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKL 201
Query: 168 IKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKAL 227
I GF + V N+L++MY +C S K+F ++ R+ V+WN+II A A+ +F AL
Sbjct: 202 IACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDAL 261
Query: 228 ELYLRM--SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
L+LRM S D + P+Q TF ++ CA +N G+ IHA +I+ + ++ V + LV
Sbjct: 262 VLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVH 321
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFT 344
Y++C L A F+ ++ +N SWN++I GY L + +QL G +P+ F+
Sbjct: 322 MYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFS 381
Query: 345 FSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
S +L S ++ Q LH I+R E + L+ YAK G + A
Sbjct: 382 LSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWK------ 435
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
+Y++T + + L WN ++A A+ G KE F
Sbjct: 436 -------------VYDQTIKKDRNTAL-----------WNSILAGYANKGLKKESFNHFL 471
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M + I D T V++++ L L ++L +DMY KC
Sbjct: 472 EMLESDIEYDVLTMVTIVNL------LVLETAL--------------------VDMYSKC 505
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
G+I + +F+ M +N+++W A+IS +G ++ AL + EM G P+ V +A+L
Sbjct: 506 GAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAIL 565
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
+AC H GLV EG+ +F M Y +E + +HY C+VDLL R G L++A++ + MP P
Sbjct: 566 SACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPE 625
Query: 641 ALIWRTFLEGCQ 652
W L C+
Sbjct: 626 VSTWGALLGACR 637
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/556 (25%), Positives = 267/556 (48%), Gaps = 64/556 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP+RN+ ++N++I AY+R +A +F M+ G P FTF L C +L +G
Sbjct: 135 MPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGG 194
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDE--VVSVFEDMPRKSLVTWNSIVSIFG 117
+ S L F D FVG AL+ +Y + C DE + VF++M ++ VTWNSI+S
Sbjct: 195 KQVHSKLIACGFKGDTFVGNALIDMYAK--CDDEESCLKVFDEMGERNQVTWNSIISAEA 252
Query: 118 KHGFVEDCMFLFCELVRSE--VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ G D + LF + SE + + +F ++ +N+++ G QIH +I+
Sbjct: 253 QFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKN 312
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
++V LV+MY +C + A+++F + R+ SWN++I ++ +AL L+ +M +
Sbjct: 313 IIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQL 372
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ + P+ + +++SC L +S G+ +H +++N +E + + LVD YAKC +++
Sbjct: 373 NGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDY 432
Query: 296 AHLCFSEI--SNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFT-FSHVLRSS 352
A + + ++N WN+++ GYA+K G + F F +L S
Sbjct: 433 AWKVYDQTIKKDRNTALWNSILAGYANK---------------GLKKESFNHFLEMLESD 477
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ + D L VT +N+ +V +
Sbjct: 478 IEY-----------------------------------DVLTMVTIVNL---LVLETALV 499
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y++ G + + + +IVSWN +I+ + +G KE L L++ M +YP+
Sbjct: 500 DMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEV 559
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF+++LSACS + G + +++ I + ++D+ G+ G + + + +
Sbjct: 560 TFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEK 619
Query: 533 MT-DRNVITWTALISA 547
M + V TW AL+ A
Sbjct: 620 MPIEPEVSTWGALLGA 635
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 131/536 (24%), Positives = 245/536 (45%), Gaps = 69/536 (12%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA---GIWSAEKMFK 200
+ +I + + G+ IH +I NG++ + + ++ +Y + + A K+F+
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
++ R++ +WNT+I A A +++ +A ++ RM V P+ TF + C L++
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDG 193
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
GK +H+K+I + D FVG+AL+D YAKCD+ E F E+ +N V+WN++I A
Sbjct: 194 GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQ 253
Query: 321 ---KSSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYE 373
+ +FL ++ + G +P++FTF+ +L Q Q+H +IR
Sbjct: 254 FGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRA------ 307
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
NI + ++ + +Y+ G+ N ++ +++
Sbjct: 308 --------------------------NITKNIIVETELVHMYSECGRLNYAKEIFNRMAE 341
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
+ SWN +I NG+ +E L LFK M+ I PD ++ S+LS+C L + G L
Sbjct: 342 RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGREL 401
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM--TDRNVITWTALISALGLN 551
H I + + + + +L+DMY KCGS+ + K++++ DRN W ++++
Sbjct: 402 HNFIVRN-TMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANK 460
Query: 552 GFAQRALEKFREMEFLGFKPD-------------RVALIAVLTACRHGGLVREGMELFER 598
G + + F EM + D AL+ + + C G + + +F+
Sbjct: 461 GLKKESFNHFLEMLESDIEYDVLTMVTIVNLLVLETALVDMYSKC---GAITKARTVFDN 517
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFP---PNALIWRTFLEGC 651
MN V ++ ++ ++G KEA + MP PN + + L C
Sbjct: 518 MNGKNIVS-----WNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSAC 568
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 204/437 (46%), Gaps = 48/437 (10%)
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
K ++ + + D+ N + +I C + GKSIH ++I N D ++ + ++
Sbjct: 57 KPTSIHTKPASDV---NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKIL 113
Query: 285 DFYAKC---DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRP 340
YA+ D+L A F E+ +N+ +WN +IL YA + + + +L++G P
Sbjct: 114 MLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCP 173
Query: 341 NEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
+ FTF+ LR A + Q+H +I G++ +V +L+ YAK L
Sbjct: 174 DNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLK-- 231
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
+++ G+ N+ V+WN +I+A A G + + L
Sbjct: 232 -----------------VFDEMGERNQ-------------VTWNSIISAEAQFGHFNDAL 261
Query: 457 ELFKYMRAAR--IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
LF M+ + I PD +TF +LL+ C+ N G +H + + I+ + V L+
Sbjct: 262 VLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRAN-ITKNIIVETELV 320
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
MY +CG + + +IFN M +RN +W ++I NG Q AL F++M+ G KPD
Sbjct: 321 HMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCF 380
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII-T 633
+L ++L++C ++G EL + R+ +E E +VD+ + G + A K+
Sbjct: 381 SLSSMLSSCVSLSDSQKGRELHNFIVRN-TMEEEGILQVVLVDMYAKCGSMDYAWKVYDQ 439
Query: 634 TMPFPPNALIWRTFLEG 650
T+ N +W + L G
Sbjct: 440 TIKKDRNTALWNSILAG 456
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 194/685 (28%), Positives = 328/685 (47%), Gaps = 85/685 (12%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
N+++ AY CG + DA R+ I EP T +++ NG
Sbjct: 43 NTLLHAYLSCGALSDARRLLRADIK---EPNVITH-------------------NIMMNG 80
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
Y + G L + +F+ MPR+ + +WN+++S + + D + F
Sbjct: 81 ---------------YAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 130 CELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
+ RS +L + +F V+ E Q+ GL K F + V +LV+M+ +
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185
Query: 189 CA-------------------------------GIWSAEKMFKDVEIRDVVSWNTIIGAL 217
C GI A + F+D+ RDVVSWN +I AL
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
++S +AL L + M V + TT+ + +CA L + GK +HAKVI++ + D
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG---YASKSSPTSIF--LLIE 332
+V SAL++ YAKC + + A F+ + ++N VSW LI G Y S +F + E
Sbjct: 306 YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAE 365
Query: 333 LLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
L+ + ++F + ++ L QLH L ++ G+ V SL++ YAK G
Sbjct: 366 LMAI----DQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGD 421
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
+ +A FV + R +V + Y++ G + + + + ++WN ++ A
Sbjct: 422 LQNA-EFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQ 480
Query: 449 NGDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
+G ++ L+++ M + + + PD T+V+L C+ + LG + G K +I +
Sbjct: 481 HGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLIL-NV 539
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
V N I MY KCG I + K+F+ + ++V++W A+I+ +G ++A + F +M
Sbjct: 540 SVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSK 599
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G KPD ++ +AVL+ C H GLV+EG F+ M R +G+ P ++H+ C+VDLL R GHL E
Sbjct: 600 GAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTE 659
Query: 628 AEKIITTMPFPPNALIWRTFLEGCQ 652
A+ +I MP P A +W L C+
Sbjct: 660 AKDLIDKMPMKPTAEVWGALLSACK 684
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 232/522 (44%), Gaps = 84/522 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
M +R+VVS+N +I+A S+ G V +AL + + M +G T+ L +C L + G
Sbjct: 230 MAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWG 289
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A V+++ L D +V +AL+ LY + G E VF + ++ V+W ++ +
Sbjct: 290 KQLHAKVIRS-LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQ 348
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + LF ++ +A+ + + +I G N DL G Q+H L +K+G + ++V
Sbjct: 349 YECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVV 408
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY-------- 230
+NSL+++Y +C + +AE +F + RD+VSW ++I A ++ N KA E +
Sbjct: 409 SNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNA 468
Query: 231 -------------------LRM-----SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
L+M S V P+ T+V + CA + + LG I
Sbjct: 469 ITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG 528
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPT 325
+K L +V V +A + Y+KC + A F ++ K++VSWNA+I GY+
Sbjct: 529 HTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 588
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAK 385
+ ++L G +P+ ++ VL + +
Sbjct: 589 AAKTFDDMLSKGAKPDYISYVAVL-------------------------------SGCSH 617
Query: 386 SGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWN 440
SGL+ + + + + P + + + R G E L+ ++ +P W
Sbjct: 618 SGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWG 677
Query: 441 IVIAACAHNGD-------YKEVLEL-----FKYMRAARIYPD 470
+++AC +G+ K V EL YM A+IY D
Sbjct: 678 ALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSD 719
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 173/352 (49%), Gaps = 22/352 (6%)
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
Q T ++ SC L ++ + + IK E +V + +++ YAK +L A F
Sbjct: 42 QNTLLHAYLSCGALSDA---RRLLRADIK---EPNVITHNIMMNGYAKQGSLSDAEELFD 95
Query: 302 EISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYR-PNEFTFSHVLRS-------S 352
+ +++ SWN L+ GY ++ + + + + G PN FTF V++S
Sbjct: 96 RMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRE 155
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
LA QLL L G + E +L+ + + G + A + + P +++A
Sbjct: 156 LAPQLLGLFWKFDFWGDPDVET---ALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLA 212
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
G Y + + ++ + D+VSWN++IAA + +G +E L L M + D+
Sbjct: 213 G-YAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 271
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T+ S L+AC++L +L G LH + ++ + D +V + LI++Y KCGS + ++FN
Sbjct: 272 TYTSSLTACARLFSLGWGKQLHAKVIRS-LPQIDPYVASALIELYAKCGSFKEAKRVFNS 330
Query: 533 MTDRNVITWTALI-SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ DRN ++WT LI +L F+ +++E F +M D+ AL +++ C
Sbjct: 331 LQDRNSVSWTVLIGGSLQYECFS-KSVELFNQMRAELMAIDQFALATLISGC 381
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 145/325 (44%), Gaps = 39/325 (12%)
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
LH ++ +G + ++ +L+ +Y G +SDA + A V+ NI+ Y + G
Sbjct: 26 LHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQG 85
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLL 478
++ +L ++ R D+ SWN +++ + + LE F M R+ P+ +TF ++
Sbjct: 86 SLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVM 145
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG----------------- 521
+C L L L GL K + D V L+DM+ +CG
Sbjct: 146 KSCGALGCRELAPQLLGLFWKFDFW-GDPDVETALVDMFVRCGYVDFASRLFSQIERPTI 204
Query: 522 --------------SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
I +++ F +M +R+V++W +I+AL +G + AL EM
Sbjct: 205 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 264
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHL 625
G + D + LTAC + G +L ++ RS P++D Y +++L + G
Sbjct: 265 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL---PQIDPYVASALIELYAKCGSF 321
Query: 626 KEAEKIITTMPFPPNALIWRTFLEG 650
KEA+++ ++ N++ W + G
Sbjct: 322 KEAKRVFNSLQ-DRNSVSWTVLIGG 345
>gi|449529626|ref|XP_004171799.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g04860-like [Cucumis sativus]
Length = 704
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 197/664 (29%), Positives = 311/664 (46%), Gaps = 54/664 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--------------- 49
++ +F+S Y L +F ++ +P TF L+
Sbjct: 14 SLTTFHSAFKFYVEGKCFTPPLLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSF 73
Query: 50 CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
C E QLQ +K G F +V TA L LY + G + +F+D P K +V+W
Sbjct: 74 CSENEKAEANQLQTHFIKWG-FDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSW 132
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
N+++S + + G D LF E+ R E + + V ++ +Q G+ IHGL +K
Sbjct: 133 NALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVK 192
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
G D + V N+LV+MY +CA + + +F ++ + VVSWNT+IGA ++ F +A+ +
Sbjct: 193 AGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLV 252
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
+ +M + V N T V ++++ A IH K L +V V ++LV Y K
Sbjct: 253 FKQMLEESVNANSVTMVSILSANANT------GCIHCYATKIGLVENVSVVTSLVCSYVK 306
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL 349
C +E A L + KN+V+ A+I YA K S+ L ++Q
Sbjct: 307 CGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQ-------------- 352
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYV-LGSLMTSYA-KSGLISDALAFVTALNIPRAVVP 407
L +L + + I G+ +++ +G Y KSGLI D L
Sbjct: 353 --HLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLV------------- 397
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
AN +Y++ + L ++ + + SWN VI++CA G + + LF M +
Sbjct: 398 ANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGY 457
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD+ T SLLSAC + NL G LH I + + + FV L+DMY KCG + +
Sbjct: 458 GPDSITLASLLSACCQNGNLHFGEILHCYILRNN-LDLEGFVGTALVDMYVKCGRMDFAE 516
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+F M + + +W +LIS GL GF AL + EM G KP+++ +L AC HGG
Sbjct: 517 NVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGG 576
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
LV EG + F+ M + +G+ PE H +V +L R G +EA I M P++ +W
Sbjct: 577 LVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGAL 636
Query: 648 LEGC 651
L C
Sbjct: 637 LSAC 640
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 147/560 (26%), Positives = 250/560 (44%), Gaps = 59/560 (10%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNP-VEGA 59
P+++VVS+N++IS Y+RCG DA ++F+ M R F+P Q T L+ SC + V+G
Sbjct: 125 PEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGK 184
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ +K GL D+ V AL+ +YG+ LD V +F ++ KS+V+WN+++ FG++
Sbjct: 185 SIHGLGVKAGLD-LDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQN 243
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + M +F +++ V + V ++ +N IH K G + V
Sbjct: 244 GLFSEAMLVFKQMLEESVNANSVTMVSILSANANTG------CIHCYATKIGLVENVSVV 297
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY-----LRMS 234
SLV Y +C I AE ++ +++V+ II AE + G + LY L M
Sbjct: 298 TSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMK 357
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+D V V +I + +G + H +K+ L D V + + Y+K DN++
Sbjct: 358 LDAV-----AMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNID 412
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS-- 351
F E+ K + SWN++I A L + L GY P+ T + +L +
Sbjct: 413 AVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACC 472
Query: 352 ---SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+L F + LHC I+R + +V +L+ Y K G +
Sbjct: 473 QNGNLHFGEI-LHCYILRNNLDLEGFVGTALVDMYVKCGRM------------------- 512
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+ E V ++ P + SWN +I+ G + L + M I
Sbjct: 513 -----------DFAENV--FKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIK 559
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P+ TF +L+AC+ + G ++KK I ++ C ++ M G+ G ++
Sbjct: 560 PNKITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIV 619
Query: 529 IFNEM-TDRNVITWTALISA 547
M T+ + W AL+SA
Sbjct: 620 FIQNMETNPDSAVWGALLSA 639
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 7/221 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
M + + S+NS+IS+ ++ G DA+ +F M G+ P T LLS C + N G
Sbjct: 421 MHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFG 480
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L +L+N L + FVGTAL+ +Y + G +D +VF+ M L +WNS++S +G
Sbjct: 481 EILHCYILRNNLD-LEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGL 539
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYELL 177
GF + + E++ + + +F G++ ++ +E G + ++ K G E
Sbjct: 540 FGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQ 599
Query: 178 VANSLVNMYFQCAGIWSAEKMF-KDVEIR-DVVSWNTIIGA 216
S+V M + AG++ +F +++E D W ++ A
Sbjct: 600 HCASMVGMLGR-AGLFEEAIVFIQNMETNPDSAVWGALLSA 639
>gi|302814049|ref|XP_002988709.1| hypothetical protein SELMODRAFT_128498 [Selaginella moellendorffii]
gi|300143530|gb|EFJ10220.1| hypothetical protein SELMODRAFT_128498 [Selaginella moellendorffii]
Length = 573
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 162/512 (31%), Positives = 273/512 (53%), Gaps = 18/512 (3%)
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
DL+ G++IH ++ +G +++V NSLVN+Y +C I A +F ++++ + SWN +I
Sbjct: 25 DLQRGQEIHRRIVDSGMTPDVVVHNSLVNLYAKCGRIDDARSLFDGMQVKSLASWNAMIA 84
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
A + +A +L+ + ++ + P+ TF+ ++ +C+ + G++IHA+V L+
Sbjct: 85 GYAHLDLGDEAFDLFRCIDLEGLGPDMLTFINLLGACSTPEFVDAGRNIHARVAALGLDS 144
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEIS-NKNIVSWNALILGYASKSSPTSIFLLIELL 334
++ + +AL+D YAKC ++EGA F+ ++ NKN VSWNA+I P L +
Sbjct: 145 NLVLATALLDMYAKCGSIEGARSVFASMADNKNQVSWNAMIAARVEYGHPDEAMYLYHQM 204
Query: 335 QL-GYRPNEFTFSHVLRSSLAF-QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
L G +PN FT + VL + + Q +Q+H + G+E+ V +L+ Y+K G + +A
Sbjct: 205 HLQGLKPNAFTSASVLGACVCVEQGMQIHSWAMSCGFEDDPVVRTALVNMYSKFGRLEEA 264
Query: 393 LAFVTA----LNIPRA----VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
N P A +V N I +Y R G +E + R +VSWN++++
Sbjct: 265 AKVFADGQGFQNDPVAGHDSIVLQNSIINMYARCGSLDEARACFDSMPRRSVVSWNVLMS 324
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
+E L+L + M I+P+ +TF + +ACS L +L G + H I +
Sbjct: 325 GYVEQQQGEESLKLVRCMDWQGIHPNAFTFSCVATACSLLKDLRAGRAAHSRIVASG-FD 383
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-----NVITWTALISALGLNGFAQRALE 559
+D V L+DMYG+CGS+ ++ + F++M R +V++W A++ +G + ALE
Sbjct: 384 TDRVVVTALMDMYGRCGSVEAARRTFDDMRRRCSTRVDVVSWNAMMGLYSHHGQPREALE 443
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
F EM G + V+L VL AC H GLV + +E R G+ P +HY CVVD+L
Sbjct: 444 LFGEMGLAGEAGNEVSLTLVLHACTHAGLVADAVEALAR-GVEAGIVPSREHYACVVDVL 502
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
R G L+ AE+++ MP P W+ L C
Sbjct: 503 ARAGKLEVAEEVMNNMPVEPGIGAWKCLLGAC 534
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 139/595 (23%), Positives = 257/595 (43%), Gaps = 90/595 (15%)
Query: 32 MINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
M G +P F + ++ C + G ++ ++ +G+ D V +L+ LY + G
Sbjct: 1 MQEEGVQPDMFVYSSVVGAYCAVGDLQRGQEIHRRIVDSGM-TPDVVVHNSLVNLYAKCG 59
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH 149
+D+ S+F+ M KSL +WN++++ + ++ LF + + +F+ ++
Sbjct: 60 RIDDARSLFDGMQVKSLASWNAMIAGYAHLDLGDEAFDLFRCIDLEGLGPDMLTFINLLG 119
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVV 208
S + ++ G IH V G D L++A +L++MY +C I A +F + + ++ V
Sbjct: 120 ACSTPEFVDAGRNIHARVAALGLDSNLVLATALLDMYAKCGSIEGARSVFASMADNKNQV 179
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SWN +I A E + +A+ LY +M + + PN T V+ +C ++ G IH+
Sbjct: 180 SWNAMIAARVEYGHPDEAMYLYHQMHLQGLKPNAFTSASVLGACVCVEQ---GMQIHSWA 236
Query: 269 IKNALECDVFVGSALV----------------------------------------DFYA 288
+ E D V +ALV + YA
Sbjct: 237 MSCGFEDDPVVRTALVNMYSKFGRLEEAAKVFADGQGFQNDPVAGHDSIVLQNSIINMYA 296
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSH 347
+C +L+ A CF + +++VSWN L+ GY + L+ + G PN FTFS
Sbjct: 297 RCGSLDEARACFDSMPRRSVVSWNVLMSGYVEQQQGEESLKLVRCMDWQGIHPNAFTFSC 356
Query: 348 VLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
V + + L+ H I+ G++ V+ +LM Y + G + A
Sbjct: 357 VATACSLLKDLRAGRAAHSRIVASGFDTDRVVVTALMDMYGRCGSVEAA----------- 405
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
RT +++ + S R D+VSWN ++ +H+G +E LELF M
Sbjct: 406 ------------RRT--FDDMRRRCST--RVDVVSWNAMMGLYSHHGQPREALELFGEMG 449
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE---IISSDTFVCNMLIDMYGKC 520
A + + +L AC+ +A ++ L + E + S + + C ++D+ +
Sbjct: 450 LAGEAGNEVSLTLVLHACTHAGLVA--DAVEALARGVEAGIVPSREHYAC--VVDVLARA 505
Query: 521 GSIGSSVKIFNEM-TDRNVITWTALISALGLNGFAQR---ALEKFREMEFLGFKP 571
G + + ++ N M + + W L+ A ++G A R A + EM+ P
Sbjct: 506 GKLEVAEEVMNNMPVEPGIGAWKCLLGACAVHGDAGRGSSAAQHVVEMQPTNAAP 560
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 122/540 (22%), Positives = 237/540 (43%), Gaps = 98/540 (18%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M +++ S+N++I+ Y+ ++A +F + G P TF LL +C + V+ G
Sbjct: 71 MQVKSLASWNAMIAGYAHLDLGDEAFDLFRCIDLEGLGPDMLTFINLLGACSTPEFVDAG 130
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
+ A V GL ++ + TALL +Y + G ++ SVF M K+ V+WN++++
Sbjct: 131 RNIHARVAALGLD-SNLVLATALLDMYAKCGSIEGARSVFASMADNKNQVSWNAMIAARV 189
Query: 118 KHGFVEDCMFLFCELVRSEV---ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
++G ++ M+L+ ++ + A T +S +G +E G QIH + GF+
Sbjct: 190 EYGHPDEAMYLYHQMHLQGLKPNAFTSASVLGAC------VCVEQGMQIHSWAMSCGFED 243
Query: 175 E----------------------------------------LLVANSLVNMYFQCAGIWS 194
+ +++ NS++NMY +C +
Sbjct: 244 DPVVRTALVNMYSKFGRLEEAAKVFADGQGFQNDPVAGHDSIVLQNSIINMYARCGSLDE 303
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A F + R VVSWN ++ E + ++L+L M + PN TF V +C+
Sbjct: 304 ARACFDSMPRRSVVSWNVLMSGYVEQQQGEESLKLVRCMDWQGIHPNAFTFSCVATACSL 363
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-----NIV 309
L++ G++ H++++ + + D V +AL+D Y +C ++E A F ++ + ++V
Sbjct: 364 LKDLRAGRAAHSRIVASGFDTDRVVVTALMDMYGRCGSVEAARRTFDDMRRRCSTRVDVV 423
Query: 310 SWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMG 368
SWNA++ Y+ P ++ L E+ G NE + + VL +
Sbjct: 424 SWNAMMGLYSHHGQPREALELFGEMGLAGEAGNEVSLTLVLHAC---------------- 467
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN----IIAGIYNRTGQYNET 424
+GL++DA+ + A + +VP+ + + R G+
Sbjct: 468 ---------------THAGLVADAVEAL-ARGVEAGIVPSREHYACVVDVLARAGKLEVA 511
Query: 425 VKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
++++ + P I +W ++ ACA +GD +++ + P N LLS +K
Sbjct: 512 EEVMNNMPVEPGIGAWKCLLGACAVHGDAGRGSSAAQHV--VEMQPTNAAPYVLLSNIAK 569
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 184/416 (44%), Gaps = 17/416 (4%)
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M + V P+ + V+ + + + G+ IH +++ + + DV V ++LV+ YAKC
Sbjct: 1 MQEEGVQPDMFVYSSVVGAYCAVGDLQRGQEIHRRIVDSGMTPDVVVHNSLVNLYAKCGR 60
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS 351
++ A F + K++ SWNA+I GYA F L + L G P+ TF ++L +
Sbjct: 61 IDDARSLFDGMQVKSLASWNAMIAGYAHLDLGDEAFDLFRCIDLEGLGPDMLTFINLLGA 120
Query: 352 SLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ + +H + +G ++ + +L+ YAK G I A + ++ + V
Sbjct: 121 CSTPEFVDAGRNIHARVAALGLDSNLVLATALLDMYAKCGSIEGARSVFASMADNKNQVS 180
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
N + G +E + L Q+ +P+ + V+ AC ++ +++ +
Sbjct: 181 WNAMIAARVEYGHPDEAMYLYHQMHLQGLKPNAFTSASVLGACVC---VEQGMQIHSWAM 237
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGL---IKKTEIISSDTFVC-NMLIDMYGK 519
+ D +L++ SK L + + + + D+ V N +I+MY +
Sbjct: 238 SCGFEDDPVVRTALVNMYSKFGRLEEAAKVFADGQGFQNDPVAGHDSIVLQNSIINMYAR 297
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
CGS+ + F+ M R+V++W L+S + +L+ R M++ G P+ V
Sbjct: 298 CGSLDEARACFDSMPRRSVVSWNVLMSGYVEQQQGEESLKLVRCMDWQGIHPNAFTFSCV 357
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
TAC +R G R+ S G + + ++D+ R G ++ A + M
Sbjct: 358 ATACSLLKDLRAGRAAHSRIVAS-GFDTDRVVVTALMDMYGRCGSVEAARRTFDDM 412
>gi|449434412|ref|XP_004134990.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Cucumis sativus]
Length = 704
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 197/664 (29%), Positives = 311/664 (46%), Gaps = 54/664 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--------------- 49
++ +F+S Y L +F ++ +P TF L+
Sbjct: 14 SLTTFHSAFKFYVEGKCFTPPLLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSF 73
Query: 50 CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
C E QLQ +K G F +V TA L LY + G + +F+D P K +V+W
Sbjct: 74 CSENEKAEANQLQTHFIKWG-FDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSW 132
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
N+++S + + G D LF E+ R E + + V ++ +Q G+ IHGL +K
Sbjct: 133 NALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVK 192
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
G D + V N+LV+MY +CA + + +F ++ + VVSWNT+IGA ++ F +A+ +
Sbjct: 193 AGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLV 252
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
+ +M + V N T V ++++ A IH K L +V V ++LV Y K
Sbjct: 253 FKQMLEESVNANSVTMVSILSANANT------GCIHCYATKIGLVENVSVVTSLVCSYVK 306
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL 349
C +E A L + KN+V+ A+I YA K S+ L ++Q
Sbjct: 307 CGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQ-------------- 352
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYV-LGSLMTSYA-KSGLISDALAFVTALNIPRAVVP 407
L +L + + I G+ +++ +G Y KSGLI D L
Sbjct: 353 --HLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLV------------- 397
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
AN +Y++ + L ++ + + SWN VI++CA G + + LF M +
Sbjct: 398 ANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGY 457
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD+ T SLLSAC + NL G LH I + + + FV L+DMY KCG + +
Sbjct: 458 GPDSITLASLLSACCQNGNLHFGEILHCYILRNN-LDLEGFVGTALVDMYVKCGRMDFAE 516
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+F M + + +W +LIS GL GF AL + EM G KP+++ +L AC HGG
Sbjct: 517 NVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGG 576
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
LV EG + F+ M + +G+ PE H +V +L R G +EA I M P++ +W
Sbjct: 577 LVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGAL 636
Query: 648 LEGC 651
L C
Sbjct: 637 LSAC 640
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 147/560 (26%), Positives = 250/560 (44%), Gaps = 59/560 (10%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNP-VEGA 59
P+++VVS+N++IS Y+RCG DA ++F+ M R F+P Q T L+ SC + V+G
Sbjct: 125 PEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGK 184
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ +K GL D+ V AL+ +YG+ LD V +F ++ KS+V+WN+++ FG++
Sbjct: 185 SIHGLGVKAGLD-LDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQN 243
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + M +F +++ V + V ++ +N IH K G + V
Sbjct: 244 GLFSEAMLVFKQMLEESVNANSVTMVSILSANANTG------CIHCYATKIGLVENVSVV 297
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY-----LRMS 234
SLV Y +C I AE ++ +++V+ II AE + G + LY L M
Sbjct: 298 TSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMK 357
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+D V V +I + +G + H +K+ L D V + + Y+K DN++
Sbjct: 358 LDAV-----AMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNID 412
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS-- 351
F E+ K + SWN++I A L + L GY P+ T + +L +
Sbjct: 413 AVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACC 472
Query: 352 ---SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+L F + LHC I+R + +V +L+ Y K G +
Sbjct: 473 QNGNLHFGEI-LHCYILRNNLDLEGFVGTALVDMYVKCGRM------------------- 512
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+ E V ++ P + SWN +I+ G + L + M I
Sbjct: 513 -----------DFAENV--FKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIK 559
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P+ TF +L+AC+ + G ++KK I ++ C ++ M G+ G ++
Sbjct: 560 PNKITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIV 619
Query: 529 IFNEM-TDRNVITWTALISA 547
M T+ + W AL+SA
Sbjct: 620 FIQNMETNPDSAVWGALLSA 639
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 7/221 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
M + + S+NS+IS+ ++ G DA+ +F M G+ P T LLS C + N G
Sbjct: 421 MHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFG 480
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L +L+N L + FVGTAL+ +Y + G +D +VF+ M L +WNS++S +G
Sbjct: 481 EILHCYILRNNLD-LEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGL 539
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYELL 177
GF + + E++ + + +F G++ ++ +E G + ++ K G E
Sbjct: 540 FGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPESQ 599
Query: 178 VANSLVNMYFQCAGIWSAEKMF-KDVEIR-DVVSWNTIIGA 216
S+V M + AG++ +F +++E D W ++ A
Sbjct: 600 HCASMVGMLGR-AGLFEEAIVFIQNMETNPDSAVWGALLSA 639
>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 923
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 196/657 (29%), Positives = 325/657 (49%), Gaps = 43/657 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEG 58
MP+RNVVS+ +++ A S G++E+AL + M F ++S C SL + V G
Sbjct: 105 MPERNVVSWTALMVALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAG 164
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + V+ +GL V +L+ + G G + + +F M + V+WN++VS++
Sbjct: 165 LQVFSHVIVSGLQ-RQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSH 223
Query: 119 HGFVEDCMFLFCELVRSEVALTE-SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G +F ++ R + + ++ +I ++ + +G +H L ++ G +
Sbjct: 224 EGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIP 283
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+LVNMY + AE +F ++ RD++SWNT+I + ++ N AL+ ++
Sbjct: 284 VVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTN 343
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P++ TF + +C+ + G+ +HA ++ +L ++ VG++L+ Y KC+++E A
Sbjct: 344 EGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAE 403
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRS----- 351
F + N ++VS N LI YA T + ++ G + N T ++L S
Sbjct: 404 RIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSN 463
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L L LH I G+ + +YV SL+T YAK G + + N+
Sbjct: 464 DLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESS---------------NNVF 508
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
I NR+ +VSWN +IAA +G +E L+LF MR D+
Sbjct: 509 QRIINRS-----------------VVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDH 551
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+S+ + L +L G LHGL K + +D+ V N +DMYGKCG + +K+
Sbjct: 552 ICLAECMSSSASLASLEEGMQLHGLGLKCGL-GNDSHVVNAAMDMYGKCGKMDEMLKMLP 610
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ R W LIS G+ + A E F+ M +G PD V + +L+AC H GLV +
Sbjct: 611 DPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDK 670
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
G++ + M+ +GV P + H C+VD+L R G EAEK I MP PN LIWR+ L
Sbjct: 671 GIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLIWRSLL 727
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 168/665 (25%), Positives = 301/665 (45%), Gaps = 48/665 (7%)
Query: 1 MPD--RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE 57
MPD R S+ + IS RCG A M M RG + F L++ C+
Sbjct: 1 MPDDHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGR 60
Query: 58 --GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
GA + A K GL + ++GTALL LYG + + +F +MP +++V+W +++
Sbjct: 61 ACGAAIHALTQKAGLM-VNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVA 119
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+G +E+ + + + R +A ++F V+ + +D G Q+ VI +G +
Sbjct: 120 LSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQ 179
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ VANSL++M + AEK+F +E RD VSWN ++ + K+ ++ M
Sbjct: 180 VSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRR 239
Query: 236 -DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
++ + TT +I+ CA G +H+ ++ L + V +ALV+ Y+ L
Sbjct: 240 GGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLA 299
Query: 295 GAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F +S ++++SWN +I Y ++ ++ L +LL P+ TFS L +
Sbjct: 300 DAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACS 359
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ L +H + +++ + V SL+T Y K I DA
Sbjct: 360 SPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDA----------------- 402
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
++ + D+VS NI+I + A D + +++F +MR +
Sbjct: 403 ---------------ERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKL 447
Query: 470 DNYTFVSLLSACSKLCNLA-LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
+ T V++L + + +L G LH +S D +V N LI MY KCG + SS
Sbjct: 448 NYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDD-YVSNSLITMYAKCGDLESSNN 506
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F + +R+V++W A+I+A +G + +L+ F +M G D + L +++
Sbjct: 507 VFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLAS 566
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ EGM+L + G+ + + +D+ + G + E K++ P W T +
Sbjct: 567 LEEGMQL-HGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQ-CWNTLI 624
Query: 649 EGCQR 653
G R
Sbjct: 625 SGYAR 629
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 194/659 (29%), Positives = 326/659 (49%), Gaps = 38/659 (5%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLN-PVEGA 59
PD V +N +I Y + G+ E+ L F M G P ++ +L C+ L+ + G
Sbjct: 510 PDITV--WNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGR 567
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGK 118
Q+ +++N +F D ++ TAL+G+Y E S+F + R ++V WN ++ F +
Sbjct: 568 QIHGYIIRN-MFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVE 626
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G E + L+ L +SF G S+ + L+FG Q+H VIK F + V
Sbjct: 627 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 686
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SL+ MY + + A+K+F V ++V N +I A + AL LY +M
Sbjct: 687 CTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGET 746
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ T +++ C+ + + G+++HA+VIK +++ +V + SAL+ Y KC + E A
Sbjct: 747 PVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADS 806
Query: 299 CFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + +++V+W ++I G+ ++ ++ L + + G + + + V+ + L
Sbjct: 807 VFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGL---- 862
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
G EN E LG L+ +A K GL SD V A + +Y+
Sbjct: 863 ----------GLENVE--LGHLIHGFAIKRGLESD-------------VFVACSLVDMYS 897
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G + S + ++V+WN +I+ + NG + + L + Y D+ + +
Sbjct: 898 KFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITT 957
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+L A S + L G +LH + +I SD V N LIDMY KCG + + IF M R
Sbjct: 958 VLVAVSSVAALLKGKTLHAYQIRLQI-PSDLQVENALIDMYVKCGCLKYAQLIFENMPRR 1016
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
N++TW ++I+ G +G + A+ F+EM+ PD V +A++T+C H G+V EG+ LF
Sbjct: 1017 NLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLF 1076
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
+ M YGVEP M+HY VVDLL R G L +A I MP + +W L C+ R
Sbjct: 1077 QLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHR 1135
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 156/572 (27%), Positives = 266/572 (46%), Gaps = 55/572 (9%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--GAQLQ 62
N+V++N +I + G E +L ++ N + +F G + S V G Q+
Sbjct: 613 NIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVH 672
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
V+K F D +V T+LL +Y + G +++ VF+ + K + N+++S F +G
Sbjct: 673 CDVIKMN-FQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRA 731
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
D + L+ ++ E + + ++ G S +FG +H VIK + + ++L
Sbjct: 732 YDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSAL 791
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
+ MY++C A+ +F ++ RDVV+W ++I ++ F AL+L+ M + V +
Sbjct: 792 LTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADS 851
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
VI++ GL+N LG IH IK LE DVFV +LVD Y+K E A + FS
Sbjct: 852 DVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSS 911
Query: 303 ISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVL--RSSLAFQL-- 357
+ NKN+V+WN++I Y+ P SI LL ++LQ G+ + + + VL SS+A L
Sbjct: 912 MPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKG 971
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
LH IR L IP + N + +Y +
Sbjct: 972 KTLHAYQIR--------------------------------LQIPSDLQVENALIDMYVK 999
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G + + R ++V+WN +IA +G+ +E + LFK M+ + PD TF++L
Sbjct: 1000 CGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLAL 1059
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM---T 534
+++CS + G +L L++ + ++D+ G+ G + + M
Sbjct: 1060 ITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDA 1119
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEF 566
DR+V W L+ FA RA R ME
Sbjct: 1120 DRSV--WLCLL-------FACRA---HRNMEL 1139
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/549 (26%), Positives = 256/549 (46%), Gaps = 60/549 (10%)
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G + L + S + + +F ++ ++ +L G IH ++ G +
Sbjct: 418 QQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPY 477
Query: 178 VANSLVNMYFQCAGIWSAEKMF-KDVEIR----DVVSWNTIIGALAESENFGKALELYLR 232
+A SL+NMY +C + SA ++F K E R D+ WN +I + +F + L + R
Sbjct: 478 IATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCR 537
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M + P+ + V+ C L + G+ IH +I+N E D ++ +AL+ Y+ C
Sbjct: 538 MQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSR 597
Query: 293 LEGAHLCFSEISNK-NIVSWNALILGYASKSSPTSIFLLIELLQLGYRPN----EFTFSH 347
A F ++ N+ NIV+WN +I G+ +EL L N +F+
Sbjct: 598 PMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKS---LELYSLAKNENCKLVSASFTG 654
Query: 348 VLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
+ ++L Q+HC +I+M +++ YV SL+T YAKSG + DA
Sbjct: 655 AFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDA----------- 703
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
K+ Q+ ++ N +I+A NG + L L+ M+
Sbjct: 704 ---------------------KKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMK 742
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGS 522
A D++T SLLS CS + + G ++H +IK++ + S+ + + L+ MY KCGS
Sbjct: 743 AGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRS--MQSNVAIQSALLTMYYKCGS 800
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ +F M +R+V+ W ++I+ N + AL+ FR ME G K D + +V++A
Sbjct: 801 TEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISA 860
Query: 583 CRHGGLVREGMELFERMNR---SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
GL E +EL ++ G+E ++ +VD+ ++G + AE + ++MP
Sbjct: 861 ----GLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMP-NK 915
Query: 640 NALIWRTFL 648
N + W + +
Sbjct: 916 NLVAWNSMI 924
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 203/455 (44%), Gaps = 49/455 (10%)
Query: 214 IGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
I AL + + +ALEL+ + + + TF ++ +CA L N G++IHA ++ L
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-----NIVSWNALILGYASKSS-PTSI 327
+ D ++ ++L++ Y KC L A F ++S +I WN +I GY +
Sbjct: 473 QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 532
Query: 328 FLLIELLQLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSY 383
+ +LG RP+ ++ S VL R S Q+H IIR +E Y+ +L+
Sbjct: 533 AQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALI--- 589
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIV 442
G+Y+ + E L +LE R +IV+WN++
Sbjct: 590 -----------------------------GMYSSCSRPMEAWSLFGKLENRSNIVAWNVM 620
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
I NG +++ LEL+ + + +F +ACS L G +H + K
Sbjct: 621 IGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMN- 679
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
D +VC L+ MY K GS+ + K+F+++ D+ V A+ISA NG A AL +
Sbjct: 680 FQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYN 739
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELF-ERMNRSYGVEPEMDHYHCVVDLLVR 621
+M+ D + ++L+ C G G + E + RS ++ + ++ + +
Sbjct: 740 KMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRS--MQSNVAIQSALLTMYYK 797
Query: 622 YGHLKEAEKIITTMPFPPNALIWRTFLEG-CQRCR 655
G ++A+ + TM + + W + + G CQ R
Sbjct: 798 CGSTEDADSVFYTMK-ERDVVAWGSMIAGFCQNRR 831
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 93/162 (57%), Gaps = 3/162 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEG 58
MP++N+V++NS+IS YS G E ++ + ++ GF + +L S ++G
Sbjct: 912 MPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKG 971
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L A ++ + +D V AL+ +Y + GCL +FE+MPR++LVTWNS+++ +G
Sbjct: 972 KTLHAYQIRLQI-PSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGS 1030
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
HG E+ + LF E+ RSE A E +F+ +I S+ +E G
Sbjct: 1031 HGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEG 1072
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
MP RN+V++NS+I+ Y G E+A+R+F M P + TF L+ SC V EG
Sbjct: 1013 MPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEG 1072
Query: 59 AQL-QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP 102
L Q ++ G+ + ++ L GR G LD+ S MP
Sbjct: 1073 LNLFQLMRIEYGVEPRMEHYAS-VVDLLGRAGRLDDAYSFIRGMP 1116
>gi|297841913|ref|XP_002888838.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334679|gb|EFH65097.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 688
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 188/637 (29%), Positives = 314/637 (49%), Gaps = 41/637 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQL 61
+N S + I ++R +EDAL + Y+ RG TF LL+ + + G Q+
Sbjct: 73 KNPHSIHRDIQRFARKNNLEDALTILDYLEQRGIPVNATTFSALLAACVRRKSLLHGKQV 132
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS---IFGK 118
+ NGL ++ F+ T L+ +Y G + + VF++ ++ +WN+++ I GK
Sbjct: 133 HVHIRINGL-ESNEFIRTKLVHMYTACGSVRDAQKVFDESTSSNVYSWNALLRGTVISGK 191
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ +D + F E+ V L SF V + L G + H L IKNG + +
Sbjct: 192 KRY-QDVLSTFTEMRELGVDLNVYSFSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFL 250
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDI 237
SLV+MYF+C + A ++F ++ RD+V W +I LA ++ +AL L+ M S +
Sbjct: 251 KTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRSMISEEG 310
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK--NALECDVFVGSALVDFYAKCDNLEG 295
++PN ++ ++ LGK +HA V+K N LE FV S L+D Y KC ++
Sbjct: 311 IYPNSVILTTILPVLGDVKALKLGKEVHAHVLKMKNYLE-QPFVHSGLIDLYCKCGDMVS 369
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
F +N +SW AL+ GYA+ ++ ++ + Q G++P+ T + VL
Sbjct: 370 GRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFKPDVVTIATVLPVCAE 429
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+ I+ G E + Y L +L ++ VT+L + +
Sbjct: 430 LR-------AIKQGKEIHCYALKNLFLP---------NVSLVTSLMV------------M 461
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y++ G V+L +LE+ ++ +W +I NGD + +E+F+ M ++ PD+ T
Sbjct: 462 YSKCGVPEYPVRLFDRLEQRNVKAWTAMIDCYVENGDLRAGIEVFRSMLLSKHRPDSVTM 521
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+L+ CS L L LG LHG I K E S FV +I MYG+CG + S+ F+ +
Sbjct: 522 GRVLTVCSDLKALKLGKELHGHILKKEF-ESIPFVSAKIIKMYGQCGDLRSANFSFDAVV 580
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+ +TWTA+I A G NG + A++ F +M GF P+ A+L+ C G E
Sbjct: 581 VKGSLTWTAIIEAYGYNGRFRDAIKCFEQMVSRGFTPNTFTFTAILSICSQAGFADEAYR 640
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
F M R Y + P +HY V++LL R+G ++EA+++
Sbjct: 641 FFNLMLRMYNLHPSEEHYSLVIELLNRFGRVEEAQRL 677
>gi|297800128|ref|XP_002867948.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313784|gb|EFH44207.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 919
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 199/723 (27%), Positives = 357/723 (49%), Gaps = 80/723 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
+ +++V+ +NS+I+ ++ G A+ +F+ MI++G E T LL+ +L+ + ++
Sbjct: 138 LKEKDVIVWNSMITCLNQNGRYIAAVGLFVEMIHKGNEFDSTTL--LLAVSALSSLHLSK 195
Query: 61 ----LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ ++ GL +D+ + AL+ LY + L VF M + +V+WN+I++
Sbjct: 196 KCPMVHCLAIETGLV-SDSSLCNALMNLYAKGEDLSSAECVFTHMEHRDIVSWNTIMTKC 254
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE- 175
+G+ + + F ++ S +F VI S ++L GE +HGLVIK+G+ E
Sbjct: 255 LANGYPRNSLIYFKSMIGSGQEADNVTFSCVISACSCLEELPLGESLHGLVIKSGYSPEA 314
Query: 176 -LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM- 233
+ VANS+++MY +C I +AE +F+++ +DV+SWN I+ L+ + F +A + M
Sbjct: 315 HVSVANSIISMYSKCGDIEAAETVFEELLCKDVISWNAILNGLSANGMFEEAFGILKEMQ 374
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF-VGSALVDFYAKCDN 292
SVD + P+ +T V + + C S G++IH ++ ++ V ++++D Y KC
Sbjct: 375 SVDKIQPDISTVVSITSICGDFCLSREGRAIHGYTVRREMQSRALEVINSVIDMYGKCGL 434
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL--- 349
A F +++++VSWN++I +A L + Y ++F+ S VL
Sbjct: 435 TTQAEFLFKTTTHRDLVSWNSMISAFAQNGFTQEAKNLFREVVSEYTCSKFSLSTVLAIL 494
Query: 350 -----RSSLAFQLLQLHCLIIRMGYENYEYVL-------------GSLMTSYAKSGLISD 391
SL F +HC + ++G ++L S++ A SG +
Sbjct: 495 TSCDSSDSLIFG-KSVHCWLQKLGDLTSAFLLLEMIFETRDLTSWNSVIYGCASSGHHLE 553
Query: 392 AL-AF-------------------VTALNIPRAVVPANIIAGI----------------- 414
+L AF ++A R V+ + G+
Sbjct: 554 SLRAFQAMSREGKIRHDLITLLGTISASGNLRLVLQGRCLHGLAIKSLRELDTQLQNTLI 613
Query: 415 --YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
Y R VK+ + P++ SWN VI+A + N +EV +LF R ++ P+
Sbjct: 614 TMYGRCKDTESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF---RNLKLEPNEI 670
Query: 473 TFVSLLSACSKLCNLALGSSLH-GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TFV LLSA ++L + + G H LI++ ++ FV L+DMY CG + + +K+F
Sbjct: 671 TFVGLLSASTQLGSTSYGMQAHCHLIRRG--FQANPFVSAALVDMYSSCGMLETGMKVFR 728
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEF--LGFKPDRVALIAVLTACRHGGLV 589
+++ W ++ISA G +G ++A+E F+EM G +P++ I++L+AC H G +
Sbjct: 729 NSGVKSISAWNSVISAYGFHGMGEKAMELFKEMSSGNSGMEPNKSTFISLLSACSHSGFI 788
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG+ + +M +GV+P +H C+VD+L R G LKEA + I + P A +W L
Sbjct: 789 NEGLRYYNQMEEKFGVKPVTEHRVCIVDMLGRAGKLKEAYEFIIGIGEPQKAGVWGALLS 848
Query: 650 GCQ 652
C
Sbjct: 849 ACN 851
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 222/468 (47%), Gaps = 43/468 (9%)
Query: 128 LFCELVRSEVALTESSFV---GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
LF E+ + + E+SF+ V+ + E IH +K GF +L ++ L+
Sbjct: 61 LFDEMPKRDNRTVEASFMFLRDVLRSFMMRIETETPRSIHCFALKCGFLQDLATSSKLLT 120
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
+Y + + S+ +F +++ +DV+ WN++I L ++ + A+ L++ M + TT
Sbjct: 121 IYGRTGDLVSSLGLFGELKEKDVIVWNSMITCLNQNGRYIAAVGLFVEMIHKGNEFDSTT 180
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
+ +++ + L S +H I+ L D + +AL++ YAK ++L A F+ +
Sbjct: 181 LLLAVSALSSLHLSKKCPMVHCLAIETGLVSDSSLCNALMNLYAKGEDLSSAECVFTHME 240
Query: 305 NKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----Q 359
+++IVSWN ++ + P S+ ++ G + TFS V+ + + L
Sbjct: 241 HRDIVSWNTIMTKCLANGYPRNSLIYFKSMIGSGQEADNVTFSCVISACSCLEELPLGES 300
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP-ANIIAGIYNRT 418
LH L+I+ GY P A V AN I +Y++
Sbjct: 301 LHGLVIKSGYS-------------------------------PEAHVSVANSIISMYSKC 329
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA-RIYPDNYTFVSL 477
G + +L D++SWN ++ + NG ++E + K M++ +I PD T VS+
Sbjct: 330 GDIEAAETVFEELLCKDVISWNAILNGLSANGMFEEAFGILKEMQSVDKIQPDISTVVSI 389
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
S C C G ++HG + E+ S V N +IDMYGKCG + +F T R+
Sbjct: 390 TSICGDFCLSREGRAIHGYTVRREMQSRALEVINSVIDMYGKCGLTTQAEFLFKTTTHRD 449
Query: 538 VITWTALISALGLNGFAQRALEKFREM--EFLGFKPDRVALIAVLTAC 583
+++W ++ISA NGF Q A FRE+ E+ K ++A+LT+C
Sbjct: 450 LVSWNSMISAFAQNGFTQEAKNLFREVVSEYTCSKFSLSTVLAILTSC 497
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 138/611 (22%), Positives = 264/611 (43%), Gaps = 83/611 (13%)
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFC 130
F D + LL +YGR G L + +F ++ K ++ WNS+++ ++G + LF
Sbjct: 108 FLQDLATSSKLLTIYGRTGDLVSSLGLFGELKEKDVIVWNSMITCLNQNGRYIAAVGLFV 167
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
E++ ++ + + LS+ + +H L I+ G + + N+L+N+Y +
Sbjct: 168 EMIHKGNEFDSTTLLLAVSALSSLHLSKKCPMVHCLAIETGLVSDSSLCNALMNLYAKGE 227
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
+ SAE +F +E RD+VSWNTI+ + +L + M + TF VI+
Sbjct: 228 DLSSAECVFTHMEHRDIVSWNTIMTKCLANGYPRNSLIYFKSMIGSGQEADNVTFSCVIS 287
Query: 251 SCAGLQNSILGKSIHAKVIKNAL--ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+C+ L+ LG+S+H VIK+ E V V ++++ Y+KC ++E A F E+ K++
Sbjct: 288 ACSCLEELPLGESLHGLVIKSGYSPEAHVSVANSIISMYSKCGDIEAAETVFEELLCKDV 347
Query: 309 VSWNALILGYASKSSPTSIFLLIELLQL--GYRPNEFTFSHVLRSSLAFQLLQLHCLIIR 366
+SWNA++ G ++ F +++ +Q +P+ T + F CL R
Sbjct: 348 ISWNAILNGLSANGMFEEAFGILKEMQSVDKIQPDISTVVSITSICGDF------CL-SR 400
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
G + Y + M S RA+ N + +Y + G +
Sbjct: 401 EGRAIHGYTVRREMQS--------------------RALEVINSVIDMYGKCGLTTQAEF 440
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN--YTFVSLLSACSKL 484
L D+VSWN +I+A A NG +E LF+ + + T +++L++C
Sbjct: 441 LFKTTTHRDLVSWNSMISAFAQNGFTQEAKNLFREVVSEYTCSKFSLSTVLAILTSCDSS 500
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
+L G S+H ++K ++S + M+ + R++ +W ++
Sbjct: 501 DSLIFGKSVHCWLQKLGDLTSAFLLLEMIFET-------------------RDLTSWNSV 541
Query: 545 ISALGLNGFAQRALEKFREMEFLG-FKPDRVALIAVLTA-----------CRHGGLVREG 592
I +G +L F+ M G + D + L+ ++A C HG ++
Sbjct: 542 IYGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLRLVLQGRCLHGLAIKSL 601
Query: 593 MELFERMNRS----YG---------------VEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
EL ++ + YG +P + ++CV+ L + +E ++
Sbjct: 602 RELDTQLQNTLITMYGRCKDTESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFR 661
Query: 634 TMPFPPNALIW 644
+ PN + +
Sbjct: 662 NLKLEPNEITF 672
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 175/616 (28%), Positives = 301/616 (48%), Gaps = 33/616 (5%)
Query: 40 TQFTFGGLLSCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVF 98
T F L C S V+ G ++ V G F + V L+ +Y + G + E VF
Sbjct: 4 TAFFVALLQRCSSAKNVDHGRRVHWHVRDRG-FEQNNLVCGHLIQMYAQCGSVPEAQQVF 62
Query: 99 EDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLE 158
E + RK + W ++ I+ + G + + +F ++ +V T+ ++V +++ ++ + L+
Sbjct: 63 EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 122
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
G +IHG +++ GF+ ++ V +L+NMY +C + A FK +E RDVVSW +I A
Sbjct: 123 DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACV 182
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ + F A LY RM +D V PN+ T V N+ GK ++ V +E DV
Sbjct: 183 QHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVR 242
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLG 337
V ++ V+ + L A F ++ ++++V+WN +I Y + ++ L L Q G
Sbjct: 243 VMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDG 302
Query: 338 YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
+ N+ TF +L V SL TS AK +I + V
Sbjct: 303 VKANDITFVLMLN------------------------VYTSL-TSLAKGKVIHE---LVK 334
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
R V A + +Y R + K+ + D+++W ++ A A NG KE L+
Sbjct: 335 EAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQ 394
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
LF+ M+ P + T V++L C+ L L G +H I + + V LI+MY
Sbjct: 395 LFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENR-FRMEMVVETALINMY 453
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
GKCG + ++ +F +M R+++ W +++ A +G+ L+ F +M+ G K D V+ +
Sbjct: 454 GKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFV 513
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
+VL+A H G V +G + F M + + + P + Y CVVDLL R G ++EA I+ +
Sbjct: 514 SVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSG 573
Query: 638 -PPNALIWRTFLEGCQ 652
P+ ++W T L C+
Sbjct: 574 CLPDGILWMTLLGACR 589
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 155/618 (25%), Positives = 286/618 (46%), Gaps = 52/618 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQL 61
++V ++ +I Y + G + AL MF M PT+ T+ +L +C S + +G ++
Sbjct: 68 KDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEI 127
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+L+ G F D FVGTAL+ +Y + G + F+ + + +V+W ++++ +H
Sbjct: 128 HGQILQQG-FEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQ 186
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+L+ + V + + V + + L G+ ++GLV + ++ V NS
Sbjct: 187 FALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNS 246
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
VNM+ + A ++F+D+ RDVV+WN +I ++ENFG+A+ L+ R+ D V N
Sbjct: 247 AVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKAN 306
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TFV ++N L + GK IH V + + D V +AL+ Y +C+ A F
Sbjct: 307 DITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFV 366
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL-- 358
++ +K++++W + + YA L + +QL G RP T VL + L
Sbjct: 367 DMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQK 426
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
Q+H II + V +L+ Y K G +++A++ + R ++ N + G Y
Sbjct: 427 GRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKM-AKRDILVWNSMLGAYA 485
Query: 417 RTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+ G Y+ET++L +Q++ + D VS+ V++A +H+G V + ++Y
Sbjct: 486 QHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSG---SVTDGYQY----------- 531
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
FV++L S + L+G + +D+ G+ G I +V I +
Sbjct: 532 -FVAMLQDFS----ITPTPELYGCV----------------VDLLGRAGRIQEAVDIVLK 570
Query: 533 MTD--RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
++ + I W L+ A + +A K + L P VL+
Sbjct: 571 LSGCLPDGILWMTLLGACRTHNKTDQA--KAAAEQVLERDPSHSGAYVVLSNVYAAAGDW 628
Query: 591 EGMELFERMNRSYGVEPE 608
+G+ ++ RS GV+ E
Sbjct: 629 DGVNRMRKLMRSRGVKKE 646
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 140/252 (55%), Gaps = 1/252 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPVEGA 59
M DR+VV++N +I+ Y + +A+R+F + G + TF +L+ SL +
Sbjct: 267 MVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKG 326
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ ++K + DA V TAL+ LYGR + +F DM K ++TW + + ++
Sbjct: 327 KVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQN 386
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
GF ++ + LF E+ T ++ V V+ ++ L+ G QIH +I+N F E++V
Sbjct: 387 GFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVE 446
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+L+NMY +C + A +F+ + RD++ WN+++GA A+ + + L+L+ +M +D V
Sbjct: 447 TALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVK 506
Query: 240 PNQTTFVYVINS 251
+ +FV V+++
Sbjct: 507 ADAVSFVSVLSA 518
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 153/346 (44%), Gaps = 38/346 (10%)
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ FV ++ C+ +N G+ +H V E + V L+ YA+C ++ A
Sbjct: 2 PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61
Query: 300 FSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F + K++ +W +I Y + ++ + ++ + P + T+ +L + + + L
Sbjct: 62 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
++H I++ G+E +V +L+ Y K G + A
Sbjct: 122 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAW--------------------- 160
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+LE D+VSW +IAAC + + L++ M+ + P+ T
Sbjct: 161 -----------DSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITL 209
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
++ +A L+ G ++GL+ + ++ SD V N ++M+G G +G + ++F +M
Sbjct: 210 YTVFNAYGDPNYLSEGKFVYGLV-SSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMV 268
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
DR+V+TW +I+ N A+ F ++ G K + + + +L
Sbjct: 269 DRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLML 314
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 94/164 (57%), Gaps = 3/164 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M ++V+++ + AY++ G+ ++AL++F M G PT T +L +C L ++ G
Sbjct: 368 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKG 427
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + +++N F + V TAL+ +YG+ G + E +SVFE M ++ ++ WNS++ + +
Sbjct: 428 RQIHSHIIEN-RFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQ 486
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ 162
HG+ ++ + LF ++ V SFV V+ LS+ + G Q
Sbjct: 487 HGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQ 530
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD FV+LL CS N+ G +H ++ + VC LI MY +CGS+ + +
Sbjct: 2 PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRG-FEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F + ++V WT +I G RAL F +M+ P +V +A+L AC
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 589 VREGMEL 595
+++GME+
Sbjct: 121 LKDGMEI 127
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 263/512 (51%), Gaps = 42/512 (8%)
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
++H S + L G +H V+K G ++ ++N ++NMY +C A ++F ++ ++
Sbjct: 9 LLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKN 68
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
+VSW+ +I ++ A++LY +M + PN+ F VI++CA L LG+ IH+
Sbjct: 69 LVSWSAMISGYDQAGEPQMAIDLYSQM---FLVPNEYVFASVISACASLSAVTLGQKIHS 125
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS 326
+ +K E FV ++L+ Y KC+ A F+ N VS+NALI G+
Sbjct: 126 RSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLER 185
Query: 327 IFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMT 381
+L+ Q G P+ F F VL + L +LHC +++ ++ ++
Sbjct: 186 GLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFI------ 239
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
N+I +Y+ E K +E D++SWN
Sbjct: 240 --------------------------GNVIITMYSELNLIQEAEKAFRLIEEKDVISWNT 273
Query: 442 VIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
+IAAC+H D+ + L +FK+M + PD++TF S L+AC+ L +++ G +H + +T
Sbjct: 274 LIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRT 333
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
+ D V N L++MY KCG IG + IF++M N+++W +I+ G +G +RA+E
Sbjct: 334 RLYQ-DLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVEL 392
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
F +M G +PD V I +LTAC H GLV +G F M +YG+ P+++H+ C++D+L
Sbjct: 393 FEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLG 452
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G L EAE+ + PF + ++ + L +
Sbjct: 453 RAGRLNEAEEYMRKFPFWNDPVVLVSLLSASR 484
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 132/526 (25%), Positives = 252/526 (47%), Gaps = 73/526 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M ++N+VS++++IS Y + G + A+ ++ M P ++ F ++S C SL+ V G
Sbjct: 64 MFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLG 120
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ + LK G + + +FV +L+ +Y + + +SVF + P + V++N++++ F +
Sbjct: 121 QKIHSRSLKFG-YESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVE 179
Query: 119 HGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ +E + F +L+R + + + +F+GV+ + ++L+ G ++H +K D
Sbjct: 180 NQQLERGLEFF-KLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPF 238
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ N ++ MY + I AEK F+ +E +DV+SWNT+I A + ++ K L ++ M+ +
Sbjct: 239 IGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEET 298
Query: 238 -VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+ TF + +CAGL + GK IHA +++ L D+ VG+ALV+ YAKC + A
Sbjct: 299 NVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYA 358
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
+ FS++ + N+VSWN +I G+ + ++ L ++ G RP+ TF
Sbjct: 359 YDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFI--------- 409
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L+T+ +GL+ + ++ + P
Sbjct: 410 ----------------------GLLTACNHAGLVDKGQLYFNSMEETYGIAP-------- 439
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
DI ++ +I G E E YMR + D V
Sbjct: 440 -------------------DIEHFSCLIDMLGRAGRLNEAEE---YMRKFPFWNDPVVLV 477
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
SLLSA ++ +G L + K + +++ +V +L ++Y G
Sbjct: 478 SLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYV--LLSNLYASDG 521
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/502 (24%), Positives = 235/502 (46%), Gaps = 43/502 (8%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G L A+VLK G +D F+ +L +Y + G VF++M K+LV+W++++S +
Sbjct: 22 GLSLHAAVLKTGT-QSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYD 80
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G + + L+ ++ + E F VI ++ + G++IH +K G++
Sbjct: 81 QAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISF 137
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V+NSL++MY +C A +F + + VS+N +I E++ + LE + M
Sbjct: 138 VSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQG 197
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P++ F+ V+ C +N G +H + +K L+ F+G+ ++ Y++ + ++ A
Sbjct: 198 LIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAE 257
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL--QLGYRPNEFTFSHVLRSSLAF 355
F I K+++SWN LI + + + + + RP++FTF+ L +
Sbjct: 258 KAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGL 317
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ Q+H ++R V +L+ YAK G I A
Sbjct: 318 ASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYA------------------- 358
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+ S++ ++VSWN +IA ++G + +ELF+ M A+ I PD+
Sbjct: 359 -------------YDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDS 405
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+ LL+AC+ + G +++T I+ D + LIDM G+ G + + +
Sbjct: 406 VTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMR 465
Query: 532 EMTDRN-VITWTALISALGLNG 552
+ N + +L+SA L+G
Sbjct: 466 KFPFWNDPVVLVSLLSASRLHG 487
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 188/413 (45%), Gaps = 44/413 (10%)
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
T +++ C+ + G S+HA V+K + DVF+ + +++ YAKC + A F E+
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 304 SNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLLQL-- 360
KN+VSW+A+I GY P + I+L Q+ PNE+ F+ V+ + + + L
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQ---MAIDLYSQMFLVPNEYVFASVISACASLSAVTLGQ 121
Query: 361 --HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
H ++ GYE+ +V SL++ Y K SDAL+ T N P
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFT--NTP---------------- 163
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
P+ VS+N +I N + LE FK MR + PD + F+ +L
Sbjct: 164 --------------EPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVL 209
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
C+ NL G+ LH K + S F+ N++I MY + I + K F + +++V
Sbjct: 210 GICTTTENLKRGAELHCQTVKLN-LDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDV 268
Query: 539 ITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
I+W LI+A + L F+ M E +PD + L AC + G ++
Sbjct: 269 ISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHA 328
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ R+ + ++ + +V++ + G + A I + M N + W T + G
Sbjct: 329 HLMRTR-LYQDLGVGNALVNMYAKCGCIGYAYDIFSKM-VHHNLVSWNTIIAG 379
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 263/512 (51%), Gaps = 42/512 (8%)
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
++H S + L G +H V+K G ++ ++N ++NMY +C A ++F ++ ++
Sbjct: 9 LLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKN 68
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
+VSW+ +I ++ A++LY +M + PN+ F VI++CA L LG+ IH+
Sbjct: 69 LVSWSAMISGYDQAGEPQMAIDLYSQM---FLVPNEYVFASVISACASLSAVTLGQKIHS 125
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS 326
+ +K E FV ++L+ Y KC+ A F+ N VS+NALI G+
Sbjct: 126 RSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLER 185
Query: 327 IFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMT 381
+L+ Q G P+ F F VL + L +LHC +++ ++ ++
Sbjct: 186 GLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFI------ 239
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
N+I +Y+ E K +E D++SWN
Sbjct: 240 --------------------------GNVIITMYSELNLIQEAEKAFRLIEEKDVISWNT 273
Query: 442 VIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
+IAAC+H D+ + L +FK+M + PD++TF S L+AC+ L +++ G +H + +T
Sbjct: 274 LIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRT 333
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
+ D V N L++MY KCG IG + IF++M N+++W +I+ G +G +RA+E
Sbjct: 334 RLYQ-DLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVEL 392
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
F +M G +PD V I +LTAC H GLV +G F M +YG+ P+++H+ C++D+L
Sbjct: 393 FEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLG 452
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G L EAE+ + PF + ++ + L +
Sbjct: 453 RAGRLNEAEEYMRKFPFWNDPVVLVSLLSASR 484
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 132/526 (25%), Positives = 252/526 (47%), Gaps = 73/526 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M ++N+VS++++IS Y + G + A+ ++ M P ++ F ++S C SL+ V G
Sbjct: 64 MFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLG 120
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ + LK G + + +FV +L+ +Y + + +SVF + P + V++N++++ F +
Sbjct: 121 QKIHSRSLKFG-YESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVE 179
Query: 119 HGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ +E + F +L+R + + + +F+GV+ + ++L+ G ++H +K D
Sbjct: 180 NQQLERGLEFF-KLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPF 238
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ N ++ MY + I AEK F+ +E +DV+SWNT+I A + ++ K L ++ M+ +
Sbjct: 239 IGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEET 298
Query: 238 -VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+ TF + +CAGL + GK IHA +++ L D+ VG+ALV+ YAKC + A
Sbjct: 299 NVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYA 358
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
+ FS++ + N+VSWN +I G+ + ++ L ++ G RP+ TF
Sbjct: 359 YDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFI--------- 409
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L+T+ +GL+ + ++ + P
Sbjct: 410 ----------------------GLLTACNHAGLVDKGQLYFNSMEETYGIAP-------- 439
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
DI ++ +I G E E YMR + D V
Sbjct: 440 -------------------DIEHFSCLIDMLGRAGRLNEAEE---YMRKFPFWNDPVVLV 477
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
SLLSA ++ +G L + K + +++ +V +L ++Y G
Sbjct: 478 SLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYV--LLSNLYASDG 521
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/502 (24%), Positives = 235/502 (46%), Gaps = 43/502 (8%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G L A+VLK G +D F+ +L +Y + G VF++M K+LV+W++++S +
Sbjct: 22 GLSLHAAVLKTGT-QSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYD 80
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G + + L+ ++ + E F VI ++ + G++IH +K G++
Sbjct: 81 QAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISF 137
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V+NSL++MY +C A +F + + VS+N +I E++ + LE + M
Sbjct: 138 VSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQG 197
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P++ F+ V+ C +N G +H + +K L+ F+G+ ++ Y++ + ++ A
Sbjct: 198 LIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAE 257
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL--QLGYRPNEFTFSHVLRSSLAF 355
F I K+++SWN LI + + + + + RP++FTF+ L +
Sbjct: 258 KAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGL 317
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ Q+H ++R V +L+ YAK G I A
Sbjct: 318 ASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAY------------------ 359
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+ S++ ++VSWN +IA ++G + +ELF+ M A+ I PD+
Sbjct: 360 --------------DIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDS 405
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+ LL+AC+ + G +++T I+ D + LIDM G+ G + + +
Sbjct: 406 VTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMR 465
Query: 532 EMTDRN-VITWTALISALGLNG 552
+ N + +L+SA L+G
Sbjct: 466 KFPFWNDPVVLVSLLSASRLHG 487
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 188/413 (45%), Gaps = 44/413 (10%)
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
T +++ C+ + G S+HA V+K + DVF+ + +++ YAKC + A F E+
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 304 SNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLLQL-- 360
KN+VSW+A+I GY P + I+L Q+ PNE+ F+ V+ + + + L
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQ---MAIDLYSQMFLVPNEYVFASVISACASLSAVTLGQ 121
Query: 361 --HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
H ++ GYE+ +V SL++ Y K SDAL+ T N P
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFT--NTP---------------- 163
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
P+ VS+N +I N + LE FK MR + PD + F+ +L
Sbjct: 164 --------------EPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVL 209
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
C+ NL G+ LH K + S F+ N++I MY + I + K F + +++V
Sbjct: 210 GICTTTENLKRGAELHCQTVKLN-LDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDV 268
Query: 539 ITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
I+W LI+A + L F+ M E +PD + L AC + G ++
Sbjct: 269 ISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHA 328
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ R+ + ++ + +V++ + G + A I + M N + W T + G
Sbjct: 329 HLMRTR-LYQDLGVGNALVNMYAKCGCIGYAYDIFSKM-VHHNLVSWNTIIAG 379
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/482 (34%), Positives = 247/482 (51%), Gaps = 42/482 (8%)
Query: 180 NSLVNMYFQCAGIWSAEK----MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
N L+NM +C+ +S +F ++ ++ WNT+I L ++ F A+E Y M
Sbjct: 46 NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRS 105
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ PN TF +V+ +CA L + LG IH V+K +CDVFV ++LV YAKC LE
Sbjct: 106 EGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLED 165
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
AH F +I +KN+VSW A+I GY +I + LL++ P+ FT VL +
Sbjct: 166 AHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQ 225
Query: 355 FQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
L +H I+ MG +V SL+ YAK G + A R+V
Sbjct: 226 LGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKA----------RSV----- 270
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ DIVSW +I A NG KE ++LF M+ + PD
Sbjct: 271 -----------------FDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPD 313
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
YT V +LSAC++L L LG + GL+ + E + + + LID+Y KCGS+ + ++F
Sbjct: 314 CYTVVGVLSACARLGALELGEWVSGLVDRNEFL-YNPVLGTALIDLYAKCGSMSRAWEVF 372
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
M +++ + W A+IS L +NG+ + + F ++E LG KPD I +L C H GLV
Sbjct: 373 KGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVD 432
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
EG F M R + + P ++HY C+VDLL R G L EA ++I MP NA++W L
Sbjct: 433 EGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGA 492
Query: 651 CQ 652
C+
Sbjct: 493 CR 494
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 185/348 (53%), Gaps = 4/348 (1%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQ 62
N+ +N++I +DA+ + M + GF P FTF +L +C L ++ G ++
Sbjct: 76 NIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIH 135
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
V+K G C D FV T+L+ LY + G L++ VF+D+P K++V+W +I+S + G
Sbjct: 136 TLVVKGGFDC-DVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKF 194
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ + +F L+ +A + V V+ + DL GE IH +++ G + V SL
Sbjct: 195 REAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSL 254
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
V+MY +C + A +F + +D+VSW +I A + +A++L+L+M + V P+
Sbjct: 255 VDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDC 314
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T V V+++CA L LG+ + V +N + +G+AL+D YAKC ++ A F
Sbjct: 315 YTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKG 374
Query: 303 ISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL 349
+ K+ V WNA+I G A S L ++ +LG +P+ TF +L
Sbjct: 375 MKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLL 422
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 165/321 (51%), Gaps = 9/321 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
+PD+NVVS+ +IIS Y G +A+ MF ++ P FT +LS C L + G
Sbjct: 173 IPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSG 232
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +++ G+ + FVGT+L+ +Y + G +++ SVF+ MP K +V+W +++ +
Sbjct: 233 EWIHKCIMEMGMV-RNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYAL 291
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G ++ + LF ++ R V + VGV+ + LE GE + GLV +N F Y ++
Sbjct: 292 NGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVL 351
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+L+++Y +C + A ++FK ++ +D V WN II LA + + L+ ++ +
Sbjct: 352 GTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGI 411
Query: 239 FPNQTTFVYVINSC--AGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCDNLEG 295
P+ TF+ ++ C AGL + G+ + + +L + +VD + L+
Sbjct: 412 KPDGNTFIGLLCGCTHAGLVDE--GRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDE 469
Query: 296 AHLCFSEIS-NKNIVSWNALI 315
AH + N + W AL+
Sbjct: 470 AHQLIRNMPMEANAIVWGALL 490
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 191/644 (29%), Positives = 326/644 (50%), Gaps = 45/644 (6%)
Query: 32 MINRGFEPTQFTFGGLLSCDSLNPVE----GAQLQASVLKNGLFC-ADAFVGTALLGLYG 86
MI GF P F F +L ++ ++ G Q+ A V K G + + L+ +YG
Sbjct: 1 MIGSGFSPDNFAFPAVLK--AVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYG 58
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
+ G L + VF+ + + V+WNSI+S + E + F ++ + + V
Sbjct: 59 KCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVS 118
Query: 147 VIHGLSN---EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
+ SN L G+QIHG + G + N+L+ MY + + A+ + E
Sbjct: 119 MALACSNLRKRDGLWLGKQIHGCCFRKGH-WRTFSNNALMAMYAKLGRLDDAKSLLVLFE 177
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
RD+V+WN++I + +++E F +AL M ++ V P+ TF V+ +C+ L GK
Sbjct: 178 DRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKE 237
Query: 264 IHAKVIK--NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-S 320
IHA ++ + +E + FVGSALVD Y C +E L F + ++ I WNA+I GYA S
Sbjct: 238 IHAYALRTDDVIE-NSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQS 296
Query: 321 KSSPTSIFLLIEL-LQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYV 375
+ ++ L IE+ G N T S ++ + + + + +H +I+ G E Y+
Sbjct: 297 EHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYL 356
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
+L+ Y++ G I + ++ R +V N I Y G+ ++ + LL +++R +
Sbjct: 357 QNALIDMYSRMGDIKTSKRIFDSME-DRDIVSWNTIITSYVICGRSSDALLLLHEMQRIE 415
Query: 436 IVSWNIVIAACAHNGDYKEVLEL-FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
S ++GDY + ++ FK P++ T +++L C+ L LA G +H
Sbjct: 416 EKS--------TYDGDYNDEKQVPFK--------PNSITLMTVLPGCASLSALAKGKEIH 459
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
+ +++S V + L+DMY KCG + + ++F++M RNVITW +I A G++G
Sbjct: 460 AYAIRN-LLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKG 518
Query: 555 QRALEKFREMEFLG-----FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
+ +LE F +M G KP V IA+ +C H G+V EG+ LF +M +G+EP
Sbjct: 519 KESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAP 578
Query: 610 DHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL-IWRTFLEGCQ 652
DHY C+VDL+ R G ++EA ++ TMP + + W + L C+
Sbjct: 579 DHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACR 622
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 171/651 (26%), Positives = 296/651 (45%), Gaps = 87/651 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGL-LSCDSLNPVEG- 58
+ +R+ VS+NSIISA R E A++ F M+ GFEP+ FT + L+C +L +G
Sbjct: 73 ITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGL 132
Query: 59 ---AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
Q+ + G + F AL+ +Y + G LD+ S+ + LVTWNS++S
Sbjct: 133 WLGKQIHGCCFRKGHW--RTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISS 190
Query: 116 FGKHG-FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL------VI 168
F ++ F+E MFL +V V +F V+ S+ L G++IH VI
Sbjct: 191 FSQNERFMEALMFLRL-MVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVI 249
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
+N F V ++LV+MY C + S +F V R + WN +I A+SE+ KAL
Sbjct: 250 ENSF-----VGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALM 304
Query: 229 LYLRMSVDI-VFPNQTTFVYVINS---CAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
L++ M ++ N TT ++ + C G+ + IH VIK LE + ++ +AL+
Sbjct: 305 LFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRK---EGIHGYVIKRGLETNRYLQNALI 361
Query: 285 DFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL---------- 334
D Y++ +++ + F + +++IVSWN +I Y + LL+ +
Sbjct: 362 DMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYD 421
Query: 335 -------QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
Q+ ++PN T VL + L G E + Y + +L+ S
Sbjct: 422 GDYNDEKQVPFKPNSITLMTVLPGCASLSALA-------KGKEIHAYAIRNLLAS----- 469
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
V + + +Y + G N ++ Q+ ++++WN++I A
Sbjct: 470 ----------------QVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYG 513
Query: 448 HNGDYKEVLELFKYM-----RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
+G KE LELF+ M + + P TF++L ++CS + G SL +K
Sbjct: 514 MHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHG 573
Query: 503 I--SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD--RNVITWTALISALGLNGFAQRAL 558
I + D + C ++D+ G+ G + + + N M V W++L+ A + + +
Sbjct: 574 IEPAPDHYAC--IVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRI--YHNIEI 629
Query: 559 EKFREMEFLGFKPDRVALIAVLTAC-RHGGLVREGMELFERMNRSYGVEPE 608
+ L +PD + +L+ GL + M L RM ++ GV+ E
Sbjct: 630 GEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRM-KAMGVKKE 679
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/650 (27%), Positives = 300/650 (46%), Gaps = 107/650 (16%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
N ++S S+CG V+DA ++F M +R
Sbjct: 45 NWVLSNLSKCGRVDDARKLFDVMPDR---------------------------------- 70
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
D ++G Y G L+E +F + P +S +TW+S++S + ++G + + LF
Sbjct: 71 ----DECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELF 126
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
E+ + ++ V+ S LE G+QIH IK FD V LV+MY +C
Sbjct: 127 WEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKC 186
Query: 190 AGIWSAEKMFK-DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYV 248
I AE +F+ + R+ V W ++ +++ + KA+E + M + + NQ TF +
Sbjct: 187 KCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSI 246
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+ +C + G +H ++++ +VFVGSALVD Y+KC +L A + +
Sbjct: 247 LTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDP 306
Query: 309 VSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQL-----LQLHC 362
VSWN++I+G + L ++ L + + +EFT+ VL + +F + + +H
Sbjct: 307 VSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVL-NCFSFVMDMRNAMSVHS 365
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
LI++ G+E Y+ V +L+ YAK G ++
Sbjct: 366 LIVKTGFEAYKLVNNALVDMYAKRGY--------------------------------FD 393
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
+ ++ D++SW ++ C HNG Y+E L LF MR I+PD ++LSAC+
Sbjct: 394 YAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACA 453
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
+L L G +H K+ + SS + V N L+ MY KCG I + K+F+ M ++VITWT
Sbjct: 454 ELTVLEFGKQVHANFLKSGLGSSLS-VDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWT 512
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
ALI NG + H GLV G F+ M
Sbjct: 513 ALIVGYAQNGRGRD----------------------------HAGLVEHGRSYFQSMEEV 544
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
YG++P +HY C++DLL R G L EA++++ M P+A +W+ L C+
Sbjct: 545 YGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACR 594
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 142/557 (25%), Positives = 267/557 (47%), Gaps = 27/557 (4%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGA 59
P R+ ++++S+IS Y R G +AL +F M G P QFT+G +L S+ + +G
Sbjct: 99 PIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGK 158
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGK 118
Q+ A +K F ++AFV T L+ +Y + C+ E +FE P +++ V W ++V+ + +
Sbjct: 159 QIHAHAIKTQ-FDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQ 217
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + F ++ + + +F ++ + FG Q+HG ++++GF + V
Sbjct: 218 NGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFV 277
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++LV+MY +C + +A +M + +E+ D VSWN++I +AL L+ M + +
Sbjct: 278 GSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHM 337
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
++ T+ V+N + + + S+H+ ++K E V +ALVD YAK + A
Sbjct: 338 KIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFD 397
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F ++++K+++SW +L+ G S ++ L E+ +G P++ + VL + +
Sbjct: 398 VFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTV 457
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L Q+H ++ G + V SL++ YAK G I DA ++ I + +I G
Sbjct: 458 LEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVG 517
Query: 414 IYNRTGQYNETVKLLSQLE------------RPDIVSWNIVIAACAHNGDYKEVLELFKY 461
Y + G+ + L+ +P + +I +G E EL
Sbjct: 518 -YAQNGRGRDHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQ 576
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M + PD + +LL+AC N+ LG + + E ++ +V +L ++Y G
Sbjct: 577 M---AVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYV--LLSNLYSAAG 631
Query: 522 SIGSSVKIFNEMTDRNV 538
+ K M R V
Sbjct: 632 KWEEAAKTRRLMKLRGV 648
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 131/287 (45%), Gaps = 27/287 (9%)
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
++++ +K G + DA + R N + G Y +G+ NE KL + ++
Sbjct: 47 VLSNLSKCGRVDDARKLFDVMP-DRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCIT 105
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
W+ +I+ G E LELF M+ P+ +T+ S+L CS L G +H
Sbjct: 106 WSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAI 165
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRA 557
KT+ S+ FV L+DMY KC I + +F D RN + WTA+++ NG +A
Sbjct: 166 KTQ-FDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKA 224
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACR-----------HGGLVREGMELFERMNRSYGVE 606
+E FR+M G + ++ ++LTAC HG +VR G +G
Sbjct: 225 IECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSG----------FGAN 274
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ +VD+ + G L A +++ TM + + W + + GC R
Sbjct: 275 VFVG--SALVDMYSKCGDLSNARRMLETMEV-DDPVSWNSMIVGCVR 318
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M D++V+S+ S+++ G E+ALR+F M G P Q +LS C L +E G
Sbjct: 402 MTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFG 461
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A+ LK+GL + + V +L+ +Y + GC+++ VF+ M + ++TW +++ + +
Sbjct: 462 KQVHANFLKSGLGSSLS-VDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQ 520
Query: 119 HGFVED 124
+G D
Sbjct: 521 NGRGRD 526
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 86/216 (39%), Gaps = 47/216 (21%)
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKI 529
YTF C +L + L + + + SSD+ N ++ KCG + + K+
Sbjct: 9 YTFSR--KVCHQLEHTELNHHIRRFVNSCGTVHSSSDS---NWVLSNLSKCGRVDDARKL 63
Query: 530 FNEMTDRN-------------------------------VITWTALISALGLNGFAQRAL 558
F+ M DR+ ITW++LIS G AL
Sbjct: 64 FDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEAL 123
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV--- 615
E F EM++ G +P++ +VL C L+ +G ++ ++ ++ + D V
Sbjct: 124 ELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQI-----HAHAIKTQFDSNAFVVTG 178
Query: 616 -VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
VD+ + + EAE + P N ++W + G
Sbjct: 179 LVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTG 214
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 178/612 (29%), Positives = 296/612 (48%), Gaps = 78/612 (12%)
Query: 82 LGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTE 141
+ LY + C + D LV+W++++S + ++G E+ + + E+ E
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 142 SSFVGVIHGLSNEQDLEFGEQIH------------------------------------- 164
+F V+ G S ++LE G+QIH
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 165 ---GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
G +IK G+D + AN+L++MY + +A +F ++ D+VSWN +I E
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
AL+L +M V P+ T + +CA + LG+ +H+ ++K +E D FVG
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRP 340
L+D Y+KC L+ A + F + K+++ WN++I GY++ ++ L + + G
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388
Query: 341 NEFTFSHVLRSSLAFQL----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
N+ T S +L+S+ Q Q+H + I+ GY+ YV SL+ SY K L+ DA
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF 448
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
V PA D+V++ +I A + G +E L
Sbjct: 449 E-------VCPAE-------------------------DLVAYTSMITAYSQYGLGEEAL 476
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
+++ M+ I PD + F SL +AC+ L G +H + K ++S D F N L++M
Sbjct: 477 KMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLS-DVFAGNSLVNM 535
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y KCGSI + IFNE++ R +++W+A+I L +G ++AL+ F +M G P+ + L
Sbjct: 536 YAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITL 595
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
++VL+AC H GLV E F M + +G+ P +HY C+VD+L R G L EA ++ MP
Sbjct: 596 VSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMP 655
Query: 637 FPPNALIWRTFL 648
F +A +W L
Sbjct: 656 FQASAAVWGALL 667
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 197/354 (55%), Gaps = 4/354 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P ++VS+N++I+ + AL++ M + P+ FT L +C ++ V+ G
Sbjct: 249 IPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLG 308
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL ++++K + D+FVG L+ +Y + G L + VF+ MP K ++ WNSI+S +
Sbjct: 309 RQLHSALMKMDME-PDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSN 367
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G+ + M LF + + + +++ ++ + Q F EQ+H + IK+G+ Y+ V
Sbjct: 368 CGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYV 427
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
ANSL++ Y +C + A K+F+ D+V++ ++I A ++ +AL++YLRM +
Sbjct: 428 ANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDI 487
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ F + N+CA L GK IH V+K L DVF G++LV+ YAKC +++ A
Sbjct: 488 KPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASC 547
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
F+EIS + IVSW+A+I G A ++ L ++L+ G PN T VL +
Sbjct: 548 IFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSA 601
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 142/259 (54%), Gaps = 5/259 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEG-- 58
MP ++V+ +NSIIS YS CGY +A+ +F M G E Q T +L + + G
Sbjct: 350 MPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFC 409
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K+G + D +V +LL YG+ L++ VFE P + LV + S+++ + +
Sbjct: 410 EQVHTISIKSG-YQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQ 468
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G E+ + ++ + ++ F + + +N E G+QIH V+K G ++
Sbjct: 469 YGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFA 528
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSLVNMY +C I A +F ++ R +VSW+ +IG LA+ + KAL+L+ +M + +
Sbjct: 529 GNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGI 588
Query: 239 FPNQTTFVYVINSC--AGL 255
PN T V V+++C AGL
Sbjct: 589 LPNHITLVSVLSACNHAGL 607
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 208/492 (42%), Gaps = 93/492 (18%)
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+D+ G IH +I+ L + N LVN+Y +C A K+ D D+VSW+ +I
Sbjct: 64 KDVSSGMAIHARIIRL---GLLGLRNRLVNLYSKCQCFRVARKLVIDSSEPDLVSWSALI 120
Query: 215 GALAESENFGKAL----ELYL------------------------------------RMS 234
++ +AL E+YL M
Sbjct: 121 SGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMI 180
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ PN+ + V+N+CAGL++ G +H +IK + D F +AL+D YAK E
Sbjct: 181 STGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPE 240
Query: 295 GAHLCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F EI +IVSWNA+I G + + ++ LL ++ P+ FT S L++
Sbjct: 241 AAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACA 300
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
A L+ QLH +++M E +V L+ Y+K GL+ DA R V
Sbjct: 301 AIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDA----------RMV---- 346
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ D++ WN +I+ ++ G E + LF M +
Sbjct: 347 ------------------FDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS------SDTFVCNMLIDMYGKCGSI 523
+ T ++L + + GS +G ++ IS D +V N L+D YGKC +
Sbjct: 389 NQTTLSTILKSTA-------GSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLL 441
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ K+F +++ +T++I+A G + AL+ + M+ KPD ++ AC
Sbjct: 442 EDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNAC 501
Query: 584 RHGGLVREGMEL 595
+ +G ++
Sbjct: 502 ANLSAYEQGKQI 513
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 41/280 (14%)
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y++ + KL+ PD+VSW+ +I+ NG +E L + M + +T
Sbjct: 91 LYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFT 150
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIIS----------------------------- 504
F S+L CS NL LG +H + TE+IS
Sbjct: 151 FSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKV 210
Query: 505 ----------SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
SD F N L+DMY K G +++ +F E+ ++++W A+I+ L+
Sbjct: 211 HGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKN 270
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHC 614
AL+ +M P L + L AC GLV+ G +L + + +EP+
Sbjct: 271 DLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMK-MDMEPDSFVGVG 329
Query: 615 VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC 654
++D+ + G L++A + MP + ++W + + G C
Sbjct: 330 LIDMYSKCGLLQDARMVFDLMPX-KDVIVWNSIISGYSNC 368
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 98/175 (56%), Gaps = 10/175 (5%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GA 59
P ++V++ S+I+AYS+ G E+AL+M+L M +R +P F F L +C +L+ E G
Sbjct: 452 PAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGK 511
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ VLK GL +D F G +L+ +Y + G +D+ +F ++ + +V+W++++ +H
Sbjct: 512 QIHVHVLKCGLL-SDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQH 570
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIH-----GLSNEQDLEFG--EQIHGLV 167
G + LF +++++ + + V V+ GL E FG E++ G+
Sbjct: 571 GHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGIT 625
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQ 62
R +VS++++I ++ G+ AL++F M+ G P T +LS C+ V A+
Sbjct: 555 RGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRF 614
Query: 63 ASVLKN--GLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKH 119
+++ G+ ++ + GR G LDE + + ++MP + S W +++ H
Sbjct: 615 FGLMEKLFGITPTQEHYA-CMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIH 673
Query: 120 GFVE 123
+E
Sbjct: 674 KNIE 677
>gi|414885414|tpg|DAA61428.1| TPA: hypothetical protein ZEAMMB73_429908 [Zea mays]
Length = 817
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 191/657 (29%), Positives = 334/657 (50%), Gaps = 48/657 (7%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGF--EPTQFTFGGLLSCDSLNPVEGAQLQ 62
+VV +N+ IS R G + MFL M+ RG EP FT+ G+LS + G +L
Sbjct: 138 SVVCWNTAISGAVRNGEHALGVEMFLDMV-RGSTCEPNSFTYSGVLSACA----AGEELG 192
Query: 63 ASVLKNGLFCA-----DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+G+ D FVGT+++ +Y + G + ++ F MP +++V+W + ++ F
Sbjct: 193 VGRAVHGMVLRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFV 252
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + M L E++RS VA+ + + ++ S + Q+HG++IK+ + +
Sbjct: 253 QQEDPVNAMLLLTEMLRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHV 312
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V +L++ Y + EK+F++V+ + + W+ I ++ + ++++L RM
Sbjct: 313 VKEALISTYANAGAVQLCEKVFQEVDTVSNRSIWSAFISGVSR-HSVQRSIQLLRRMLFQ 371
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ PN + V +S + +S LG+ +H VIK+ V V SAL Y++C++L+ +
Sbjct: 372 CLRPNDKCYASVFSS---VDSSELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDS 428
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF 355
+ F E+ ++ VSW ++I G+A+ F +L ++ G+ PN+ + S +L +
Sbjct: 429 YKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSA---- 484
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
C I + E V G ++ +Y ++ T++N + + +Y
Sbjct: 485 ------CNIPECLLKGKE-VHGHVLRAYGRT----------TSIN--------HCLVSMY 519
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
++ KL D + + +I+ A NG +E L LF+ M AA + D +
Sbjct: 520 SKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHIDRFLCS 579
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S++S C+ + G LHG K I+S + + L+ +Y K G++ S K+F+E+
Sbjct: 580 SIISICANMARPFCGKLLHGYASKVGILSDLSVS-SSLVKLYSKSGNLDDSRKVFDELDV 638
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+++TWTA+I +G +Q AL F M G KPD V L++VL+AC GLV EG +
Sbjct: 639 PDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLSACGRNGLVEEGFKH 698
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M YGVEP + HY C+VDLL R G L EA+ I +MP PN+++W T L C+
Sbjct: 699 FNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKPNSMVWSTLLAACR 755
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 234/486 (48%), Gaps = 47/486 (9%)
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGAL 217
F EQ++ K+G + + +++V++ + + A + F+D E R VV WNT I
Sbjct: 90 FAEQLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGA 149
Query: 218 AESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ +E++L M PN T+ V+++CA + +G+++H V++ E D
Sbjct: 150 VRNGEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYD 209
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQ 335
VFVG+++V+ Y KC + A F + +N+VSW I G+ + P ++ LL E+L+
Sbjct: 210 VFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLR 269
Query: 336 LGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS- 390
G N++T + +L ++S+ + Q+H +II+ V +L+++YA +G +
Sbjct: 270 SGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQL 329
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
F + + + I+G+ + Q +++LL ++
Sbjct: 330 CEKVFQEVDTVSNRSIWSAFISGVSRHSVQ--RSIQLLRRM------------------- 368
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
LF+ +R P++ + S+ S+ + LG LH L+ K I V
Sbjct: 369 -------LFQCLR-----PNDKCYASVFSSVD---SSELGRQLHPLVIKDGFIHV-VLVA 412
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
+ L MY +C + S K+F EM +++ ++WT++I+ +G + A + R M GF
Sbjct: 413 SALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFT 472
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
P+ V+L A+L+AC + +G E+ + R+YG ++ HC+V + + L+ A K
Sbjct: 473 PNDVSLSAILSACNIPECLLKGKEVHGHVLRAYGRTTSIN--HCLVSMYSKCKDLQTARK 530
Query: 631 IITTMP 636
+ P
Sbjct: 531 LFDATP 536
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEGA 59
P ++ + +S+IS Y+ GY E+AL +F M+ GF +F ++S C ++ P G
Sbjct: 536 PCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHIDRFLCSSIISICANMARPFCGK 595
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
L K G+ +D V ++L+ LY + G LD+ VF+++ LVTW +I+ + +H
Sbjct: 596 LLHGYASKVGIL-SDLSVSSSLVKLYSKSGNLDDSRKVFDELDVPDLVTWTAIIDGYAQH 654
Query: 120 GFVEDCMFLFCELVRSEV 137
G +D + LF ++R V
Sbjct: 655 GSSQDALALFDLMIRCGV 672
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQRALEKF 561
+S D ++C+ ++D+ K G +G +++ F + R +V+ W IS NG +E F
Sbjct: 103 LSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNGEHALGVEMF 162
Query: 562 REM-EFLGFKPDRVALIAVLTACRHG---GLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
+M +P+ VL+AC G G+ R + R + Y V +V+
Sbjct: 163 LDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTS----IVN 218
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ V+ G + A MP N + W T + G
Sbjct: 219 MYVKCGQMGAAMNEFWRMPI-RNVVSWTTAIAG 250
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 187/587 (31%), Positives = 294/587 (50%), Gaps = 41/587 (6%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVT-WNSIVSI 115
+G + V+ GL D F+ L+ LY D VF++M ++ WN +++
Sbjct: 21 QGKLIHQKVVTLGLQ-NDIFLCKNLINLYLSCHLYDHAKCVFDNMENPCEISLWNGLMAG 79
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ K+ + + LF +L+ +S ++ V+ G+ IH ++K G
Sbjct: 80 YTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMM 139
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+++V +SLV MY +C A +F ++ +DV WNT+I +S NF +ALE + M
Sbjct: 140 DIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMR 199
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
PN T I+SCA L + G IH ++I + D F+ SALVD Y KC +LE
Sbjct: 200 RFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLE 259
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTS-IFLLIELLQLGYRPNEFTFSHVL---- 349
A F ++ K +V+WN++I GY K S I L + G +P T S ++
Sbjct: 260 MAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCS 319
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
RS+ + +H IR ++ ++ SLM Y K G + A NI + ++P
Sbjct: 320 RSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVE------LAENIFK-LIP-- 370
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ +VSWN++I+ G E L LF MR + + P
Sbjct: 371 -----------------------KSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEP 407
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D TF S+L+ACS+L L G +H LI + ++ ++ V L+DMY KCG++ + +
Sbjct: 408 DAITFTSVLTACSQLAALEKGEEIHNLIIEKKL-DNNEVVMGALLDMYAKCGAVDEAFSV 466
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F + R++++WT++I+A G +G A ALE F EM KPDRV +A+L+AC H GLV
Sbjct: 467 FKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLV 526
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
EG F +M YG+ P ++HY C++DLL R G L EA +I+ P
Sbjct: 527 DEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNP 573
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/539 (25%), Positives = 257/539 (47%), Gaps = 55/539 (10%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGF-EPTQFTFGGLL-SCDSLNP-VEGAQLQASV 65
+N +++ Y++ +AL +F +++ + +P +T+ +L +C L V G + +
Sbjct: 73 WNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCL 132
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
+K GL D VG++L+G+Y + ++ + +F +MP K + WN+++S + + G ++
Sbjct: 133 VKTGLM-MDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEA 191
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
+ F + R + I + DL G +IH +I +GF + ++++LV+M
Sbjct: 192 LEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDM 251
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C + A ++F+ + + VV+WN++I + ++L+ RM + V P TT
Sbjct: 252 YGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTL 311
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
+I C+ + GK +H I+N ++ DVF+ S+L+D Y KC +E A F I
Sbjct: 312 SSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPK 371
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLL----QL 360
+VSWN +I GY ++ L ++ Y P+ TF+ VL + L ++
Sbjct: 372 SKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEI 431
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H LII +N E V+G+L+ YAK G + +A +
Sbjct: 432 HNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFS-------------------------- 465
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+ L + D+VSW +I A +G LELF M + + PD TF+++LSA
Sbjct: 466 ------VFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSA 519
Query: 481 CSKLCNLALGS-------SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
C + G +++G+I + E S LID+ G+ G + + +I +
Sbjct: 520 CGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSC-------LIDLLGRAGRLHEAYEILQQ 571
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 195/355 (54%), Gaps = 6/355 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPV-EG 58
MP+++V +N++IS Y + G ++AL F M GFEP T + SC L + G
Sbjct: 167 MPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRG 226
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ ++ +G F D+F+ +AL+ +YG+ G L+ + VFE MP+K++V WNS++S +G
Sbjct: 227 MEIHEELINSG-FLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGL 285
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G C+ LF + V T ++ +I S L G+ +HG I+N ++ +
Sbjct: 286 KGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFI 345
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII-GALAESENFGKALELYLRMSVDI 237
+SL+++YF+C + AE +FK + VVSWN +I G +AE + F +AL L+ M
Sbjct: 346 NSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLF-EALGLFSEMRKSY 404
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ TF V+ +C+ L G+ IH +I+ L+ + V AL+D YAKC ++ A
Sbjct: 405 VEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAF 464
Query: 298 LCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRS 351
F + +++VSW ++I Y S ++ L E+LQ +P+ TF +L +
Sbjct: 465 SVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSA 519
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 231/493 (46%), Gaps = 45/493 (9%)
Query: 153 NEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS-WN 211
N + L+ G+ IH V+ G ++ + +L+N+Y C A+ +F ++E +S WN
Sbjct: 15 NSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPCEISLWN 74
Query: 212 TIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
++ ++ + +ALEL+ ++ + P+ T+ V+ +C GL +LGK IH ++K
Sbjct: 75 GLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVK 134
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLL 330
L D+ VGS+LV YAKC+ E A F+E+ K++ WN +I Y +
Sbjct: 135 TGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEY 194
Query: 331 IELL-QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS--LMTSYAKSG 387
L+ + G+ PN T + + S +LL L+ G E +E ++ S L+ S+ S
Sbjct: 195 FGLMRRFGFEPNSVTITTAISS--CARLLDLN-----RGMEIHEELINSGFLLDSFISSA 247
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
L+ +Y + G +++ Q+ + +V+WN +I+
Sbjct: 248 LVD-----------------------MYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYG 284
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
GD ++LFK M + P T SL+ CS+ L G +HG + I SD
Sbjct: 285 LKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNR-IQSDV 343
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
F+ + L+D+Y KCG + + IF + V++W +IS G AL F EM
Sbjct: 344 FINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKS 403
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV----VDLLVRYG 623
+PD + +VLTAC + +G E+ + +E ++D+ V +D+ + G
Sbjct: 404 YVEPDAITFTSVLTACSQLAALEKGEEIHNLI-----IEKKLDNNEVVMGALLDMYAKCG 458
Query: 624 HLKEAEKIITTMP 636
+ EA + +P
Sbjct: 459 AVDEAFSVFKCLP 471
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 141/259 (54%), Gaps = 5/259 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL--SCDSLNPVEG 58
MP + VV++NS+IS Y G +++F M N G +PT T L+ S +EG
Sbjct: 268 MPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEG 327
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ ++N + +D F+ ++L+ LY + G ++ ++F+ +P+ +V+WN ++S +
Sbjct: 328 KFVHGYTIRNRIQ-SDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVA 386
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + + LF E+ +S V +F V+ S LE GE+IH L+I+ D +V
Sbjct: 387 EGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVV 446
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+L++MY +C + A +FK + RD+VSW ++I A ALEL+ M +
Sbjct: 447 MGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNM 506
Query: 239 FPNQTTFVYVINSC--AGL 255
P++ TF+ ++++C AGL
Sbjct: 507 KPDRVTFLAILSACGHAGL 525
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 7/258 (2%)
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP-DIVSWNIVIAACAHNGDYKE 454
V L + + + +Y Y+ + +E P +I WN ++A N Y E
Sbjct: 29 VVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVE 88
Query: 455 VLELF-KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
LELF K + + PD+YT+ S+L AC L LG +H + KT ++ D V + L
Sbjct: 89 ALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMM-DIVVGSSL 147
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+ MY KC + ++ +FNEM +++V W +IS +G + ALE F M GF+P+
Sbjct: 148 VGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNS 207
Query: 574 VALIAVLTACRHGGLVREGMELFERM-NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII 632
V + +++C + GME+ E + N + ++ + +VD+ + GHL+ A ++
Sbjct: 208 VTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFIS--SALVDMYGKCGHLEMAIEVF 265
Query: 633 TTMPFPPNALIWRTFLEG 650
MP + W + + G
Sbjct: 266 EQMP-KKTVVAWNSMISG 282
>gi|293337115|ref|NP_001168043.1| uncharacterized protein LOC100381772 precursor [Zea mays]
gi|223945665|gb|ACN26916.1| unknown [Zea mays]
gi|224028321|gb|ACN33236.1| unknown [Zea mays]
Length = 780
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 191/657 (29%), Positives = 333/657 (50%), Gaps = 48/657 (7%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGF--EPTQFTFGGLLSCDSLNPVEGAQLQ 62
+VV +N+ IS R G + MFL M+ RG EP FT+ G+LS G +L
Sbjct: 101 SVVCWNTAISGAVRNGEHALGVEMFLDMV-RGSTCEPNSFTYSGVLSA----CAAGEELG 155
Query: 63 ASVLKNGLFCA-----DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+G+ D FVGT+++ +Y + G + ++ F MP +++V+W + ++ F
Sbjct: 156 VGRAVHGMVLRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFV 215
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + M L E++RS VA+ + + ++ S + Q+HG++IK+ + +
Sbjct: 216 QQEDPVNAMLLLTEMLRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHV 275
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V +L++ Y + EK+F++V+ + + W+ I ++ + ++++L RM
Sbjct: 276 VKEALISTYANAGAVQLCEKVFQEVDTVSNRSIWSAFISGVSR-HSVQRSIQLLRRMLFQ 334
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ PN + V +S + +S LG+ +H VIK+ V V SAL Y++C++L+ +
Sbjct: 335 CLRPNDKCYASVFSS---VDSSELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDS 391
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF 355
+ F E+ ++ VSW ++I G+A+ F +L ++ G+ PN+ + S +L +
Sbjct: 392 YKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSA---- 447
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
C I + E V G ++ +Y ++ T++N + + +Y
Sbjct: 448 ------CNIPECLLKGKE-VHGHVLRAYGRT----------TSIN--------HCLVSMY 482
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
++ KL D + + +I+ A NG +E L LF+ M AA + D +
Sbjct: 483 SKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHIDRFLCS 542
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S++S C+ + G LHG K I+S + + L+ +Y K G++ S K+F+E+
Sbjct: 543 SIISICANMARPFCGKLLHGYASKVGILSDLSVS-SSLVKLYSKSGNLDDSRKVFDELDV 601
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+++TWTA+I +G +Q AL F M G KPD V L++VL+AC GLV EG +
Sbjct: 602 PDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLSACGRNGLVEEGFKH 661
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M YGVEP + HY C+VDLL R G L EA+ I +MP PN+++W T L C+
Sbjct: 662 FNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKPNSMVWSTLLAACR 718
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 234/486 (48%), Gaps = 47/486 (9%)
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGAL 217
F EQ++ K+G + + +++V++ + + A + F+D E R VV WNT I
Sbjct: 53 FAEQLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGA 112
Query: 218 AESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ +E++L M PN T+ V+++CA + +G+++H V++ E D
Sbjct: 113 VRNGEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYD 172
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQ 335
VFVG+++V+ Y KC + A F + +N+VSW I G+ + P ++ LL E+L+
Sbjct: 173 VFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLR 232
Query: 336 LGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS- 390
G N++T + +L ++S+ + Q+H +II+ V +L+++YA +G +
Sbjct: 233 SGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQL 292
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
F + + + I+G+ + Q +++LL ++
Sbjct: 293 CEKVFQEVDTVSNRSIWSAFISGVSRHSVQ--RSIQLLRRM------------------- 331
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
LF+ +R P++ + S+ S+ + LG LH L+ K I V
Sbjct: 332 -------LFQCLR-----PNDKCYASVFSSVD---SSELGRQLHPLVIKDGFIHV-VLVA 375
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
+ L MY +C + S K+F EM +++ ++WT++I+ +G + A + R M GF
Sbjct: 376 SALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFT 435
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
P+ V+L A+L+AC + +G E+ + R+YG ++ HC+V + + L+ A K
Sbjct: 436 PNDVSLSAILSACNIPECLLKGKEVHGHVLRAYGRTTSIN--HCLVSMYSKCKDLQTARK 493
Query: 631 IITTMP 636
+ P
Sbjct: 494 LFDATP 499
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEGA 59
P ++ + +S+IS Y+ GY E+AL +F M+ GF +F ++S C ++ P G
Sbjct: 499 PCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHIDRFLCSSIISICANMARPFCGK 558
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
L K G+ +D V ++L+ LY + G LD+ VF+++ LVTW +I+ + +H
Sbjct: 559 LLHGYASKVGIL-SDLSVSSSLVKLYSKSGNLDDSRKVFDELDVPDLVTWTAIIDGYAQH 617
Query: 120 GFVEDCMFLFCELVRSEV 137
G +D + LF ++R V
Sbjct: 618 GSSQDALALFDLMIRCGV 635
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQRALEKF 561
+S D ++C+ ++D+ K G +G +++ F + R +V+ W IS NG +E F
Sbjct: 66 LSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNGEHALGVEMF 125
Query: 562 REM-EFLGFKPDRVALIAVLTACRHG---GLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
+M +P+ VL+AC G G+ R + R + Y V +V+
Sbjct: 126 LDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTS----IVN 181
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ V+ G + A MP N + W T + G
Sbjct: 182 MYVKCGQMGAAMNEFWRMPI-RNVVSWTTAIAG 213
>gi|255572205|ref|XP_002527042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533604|gb|EEF35342.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 520
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 173/529 (32%), Positives = 281/529 (53%), Gaps = 39/529 (7%)
Query: 120 GFVEDCMF-----LFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
+ ++CM+ LF L++ +S ++ V+ ++G IH +IK+GF
Sbjct: 3 AYTKNCMYTEALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSGFV 62
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
++++VA+SLV+++ +C A ++F ++ RDV WNT+I + KALE++ +M
Sbjct: 63 FDIVVASSLVSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEMFGKM 122
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
PN T VI+SCA L + GK IH +V++N + D FVGSALVD Y K L
Sbjct: 123 RDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGKFGCL 182
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
+ A F ++ K +V+WN+LI GY+S + S I L + G +P T S +L +
Sbjct: 183 DLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSILLAC 242
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
LQ H I GY V + S SGLI
Sbjct: 243 SRAAHLQ-HGRFIH-GYAVRNRVQLDIFVS---SGLIE---------------------- 275
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G+ + L + ++V WN++I+ GDY + L+++ M+ A + PD
Sbjct: 276 -LYFKCGKVQSAENIFYMLPKANVVLWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAV 334
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF S+LSACS+L L G +H I K ++ ++ V L+DMY KCG++ ++ +FN+
Sbjct: 335 TFSSILSACSQLAALEKGKEIHNCITKNDL-ETNEIVMGALLDMYAKCGAVDEALSVFNK 393
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ +R++++WT++ISA G +G A AL F E++ PD V +AVL+AC H GLV +G
Sbjct: 394 LPERDLLSWTSIISAYGSHGQALEALRLFEELQQSKASPDAVTFLAVLSACSHAGLVDKG 453
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
F +M +YG++P ++HY C++DLL G ++E + + +P P A
Sbjct: 454 YYYFNQMITNYGIKPGLEHYSCLIDLL---GRIQEQSQELNEIPCPNRA 499
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/392 (32%), Positives = 210/392 (53%), Gaps = 16/392 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+R+V +N++IS Y + G E AL MF M + GFEP T ++S C L +E G
Sbjct: 91 MPERDVACWNTVISCYYQDGKAEKALEMFGKMRDSGFEPNSVTLTTVISSCARLLDLERG 150
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ V++NG+ D FVG+AL+ +YG+ GCLD +FE MP+K+LV WNS+++ +
Sbjct: 151 KEIHREVMQNGMVL-DGFVGSALVDMYGKFGCLDLAKDIFEQMPKKTLVAWNSLIAGYSS 209
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
++C+ LF + T ++ ++ S L+ G IHG ++N ++ V
Sbjct: 210 AADSKECIELFWRMNMEGTKPTVTTLSSILLACSRAAHLQHGRFIHGYAVRNRVQLDIFV 269
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++ L+ +YF+C + SAE +F + +VV WN +I ++ KAL++Y M + V
Sbjct: 270 SSGLIELYFKCGKVQSAENIFYMLPKANVVLWNVMISGYVTIGDYVKALDMYDEMKIASV 329
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ TF ++++C+ L GK IH + KN LE + V AL+D YAKC ++ A
Sbjct: 330 KPDAVTFSSILSACSQLAALEKGKEIHNCITKNDLETNEIVMGALLDMYAKCGAVDEALS 389
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+++ ++++SW ++I Y S ++ L EL Q P+ TF VL +
Sbjct: 390 VFNKLPERDLLSWTSIISAYGSHGQALEALRLFEELQQSKASPDAVTFLAVLSAC----- 444
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYA-KSGL 388
H ++ GY Y ++T+Y K GL
Sbjct: 445 --SHAGLVDKGY----YYFNQMITNYGIKPGL 470
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 243/479 (50%), Gaps = 43/479 (8%)
Query: 13 ISAYSR-CGYVEDALRMFLYMINRGF-EPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKN 68
++AY++ C Y E AL +F ++ + +P FT+ +L +C L + G + ++K+
Sbjct: 1 MAAYTKNCMYTE-ALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKS 59
Query: 69 GLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFL 128
G F D V ++L+ L+ + + +F++MP + + WN+++S + + G E + +
Sbjct: 60 G-FVFDIVVASSLVSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEM 118
Query: 129 FCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
F ++ S + VI + DLE G++IH V++NG + V ++LV+MY +
Sbjct: 119 FGKMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGK 178
Query: 189 CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYV 248
+ A+ +F+ + + +V+WN++I + + + + +EL+ RM+++ P TT +
Sbjct: 179 FGCLDLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSI 238
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+ +C+ + G+ IH ++N ++ D+FV S L++ Y KC ++ A F + N+
Sbjct: 239 LLACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFYMLPKANV 298
Query: 309 VSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLL----QLHCL 363
V WN +I GY + + + +++ +P+ TFS +L + L ++H
Sbjct: 299 VLWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNC 358
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
I + E E V+G+L+ YAK G + +AL+ ++N+
Sbjct: 359 ITKNDLETNEIVMGALLDMYAKCGAVDEALS-------------------VFNK------ 393
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
L D++SW +I+A +G E L LF+ ++ ++ PD TF+++LSACS
Sbjct: 394 -------LPERDLLSWTSIISAYGSHGQALEALRLFEELQQSKASPDAVTFLAVLSACS 445
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 111/211 (52%), Gaps = 8/211 (3%)
Query: 443 IAACAHNGDYKEVLELF-KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+AA N Y E LELF + ++ + PD++T+ S+L AC L G +H + K+
Sbjct: 1 MAAYTKNCMYTEALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSG 60
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
+ D V + L+ ++ KC G ++++F+EM +R+V W +IS +G A++ALE F
Sbjct: 61 FVF-DIVVASSLVSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEMF 119
Query: 562 REMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY--HCVVDLL 619
+M GF+P+ V L V+++C + G E+ + ++ V +D + +VD+
Sbjct: 120 GKMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQNGMV---LDGFVGSALVDMY 176
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++G L A+ I MP + W + + G
Sbjct: 177 GKFGCLDLAKDIFEQMP-KKTLVAWNSLIAG 206
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 170/521 (32%), Positives = 262/521 (50%), Gaps = 48/521 (9%)
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKD-VE 203
V + ++ Q+L G+Q+H L+I GF SL+NMY +C + A +F D
Sbjct: 15 VAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCH 74
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
R+V ++N II + K + Y +M ++ V P++ TF V+ +C + K
Sbjct: 75 ERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KK 131
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS 323
IH ++K LE DVFVGSALV+ Y K ++E A F E+S +++V WNA+I GYA
Sbjct: 132 IHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGC 191
Query: 324 PTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGS 378
+ + + G P+ FT + +L + L +H ++++MGY++ V +
Sbjct: 192 LDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNA 251
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
L+ Y K I DAL +N DI S
Sbjct: 252 LIDMYGKCKHIGDALIIFEMIN--------------------------------EKDIFS 279
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG--- 495
WN +I+ GD+ L LF M + I PD T ++L ACS L L G +HG
Sbjct: 280 WNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMI 339
Query: 496 ---LIKKTEIISSDTF-VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
L K E + D V N ++DMY KCGS+ +++KIF+ M+ ++V +W +I G++
Sbjct: 340 INGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMH 399
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G+A AL F +M FKP+ V L+ VL+AC H G V G +M ++GV P ++H
Sbjct: 400 GYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEH 459
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y CV+D+L R GHL++A +I+ MP N ++WR L C+
Sbjct: 460 YTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACR 500
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 141/534 (26%), Positives = 261/534 (48%), Gaps = 36/534 (6%)
Query: 47 LLSC-DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFED-MPRK 104
L SC D N +G QL + ++ G + + T+L+ +Y + G + E + VF D +
Sbjct: 18 LQSCADHQNLNKGKQLHSLMITYGFSPSPPSI-TSLINMYSKCGQMGEAILVFYDPCHER 76
Query: 105 SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQI 163
++ +N+I+S F +G F F + +R E + + +F V+ +++ +I
Sbjct: 77 NVFAYNAIISGFVSNGLASKG-FQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVK---KI 132
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
HG ++K G + ++ V ++LVN Y + + A+K+F ++ IRDVV WN +I A+
Sbjct: 133 HGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCL 192
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
+ALE++ RM V V P++ T +++ A + GK++H V+K + V V +AL
Sbjct: 193 DEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNAL 252
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNE 342
+D Y KC ++ A + F I+ K+I SWN++I + ++ L ++L G P+
Sbjct: 253 IDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDL 312
Query: 343 FTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
T + VL + H + G E + Y++ + + ++G + + L
Sbjct: 313 VTITTVLPACS-------HLAALMHGREIHGYMIINGLGKDDENGAVDNLLV-------- 357
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
+N + +Y + G N +K+ + + D+ SWNI+I +G E L +F M
Sbjct: 358 -----SNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQM 412
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT--EIISSDTFVCNMLIDMYGKC 520
A P+ T V +LSAC+ ++ G ++ T I + + + C +IDM G+
Sbjct: 413 CEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTC--VIDMLGRA 470
Query: 521 GSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
G + + +I +M N + W AL+ A L+G A+ L + + L +P+
Sbjct: 471 GHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAE--LAEIAARQVLQLEPEH 522
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 240/488 (49%), Gaps = 31/488 (6%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQ 60
+RNV ++N+IIS + G + + M G P ++TF ++ C+ + E +
Sbjct: 75 ERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVM---EVKK 131
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ +LK GL D FVG+AL+ Y ++G +++ VF ++ + +V WN++++ + K G
Sbjct: 132 IHGCLLKMGLE-LDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIG 190
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+++ + +F + VA + + G++ ++ DL+ G+ +HG+V+K G+D + V+N
Sbjct: 191 CLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSN 250
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L++MY +C I A +F+ + +D+ SWN+II + + L L+ +M + P
Sbjct: 251 ALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILP 310
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD--------VFVGSALVDFYAKCDN 292
+ T V+ +C+ L + G+ IH +I N L D + V +A++D YAKC +
Sbjct: 311 DLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGS 370
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLR- 350
+ A F +S K++ SWN +I+GY + ++ + ++ + ++PNE T VL
Sbjct: 371 MNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSA 430
Query: 351 -------SSLAFQLLQLHCLI-IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
S L Q+ + E+Y V+ L ++G + DA V + I
Sbjct: 431 CNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDML----GRAGHLEDAYEIVQKMPIQ 486
Query: 403 RAVVPANIIAG---IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
V + G ++ + + QLE S+ ++ G Y+EVLE+
Sbjct: 487 ANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVR 546
Query: 460 KYMRAARI 467
K M+ +
Sbjct: 547 KTMKEQNV 554
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 189/420 (45%), Gaps = 44/420 (10%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N T V + SCA QN GK +H+ +I ++L++ Y+KC + A L F
Sbjct: 10 NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF 69
Query: 301 SE-ISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSL-AFQL 357
+ +N+ ++NA+I G+ S + F + ++L G P+++TF V+R+ ++
Sbjct: 70 YDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV 129
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
++H +++MG E +V +L+ +Y K+G + DA
Sbjct: 130 KKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQ------------------------ 165
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
K+ +L D+V WN +I A G E LE+F+ M + P +T +
Sbjct: 166 --------KVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGI 217
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
LS + +L G ++HG++ K S V N LIDMYGKC IG ++ IF + +++
Sbjct: 218 LSVFASRGDLDNGKTVHGIVMKMG-YDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKD 276
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+ +W ++IS G L F +M G PD V + VL AC H + G E+
Sbjct: 277 IFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHG 336
Query: 598 RM-------NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
M + G + + V+D+ + G + A KI +M + W + G
Sbjct: 337 YMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMS-KKDVASWNIMIMG 395
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M ++V S+N +I Y GY +AL MF M F+P + T G+LS C+ V
Sbjct: 381 MSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHG 440
Query: 60 QLQASVLKNGLFCADAFVG-TALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
+L + +++ T ++ + GR G L++ + + MP + + V W +++
Sbjct: 441 RLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACR 500
Query: 118 KHGFVE 123
HG E
Sbjct: 501 LHGNAE 506
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 181/596 (30%), Positives = 292/596 (48%), Gaps = 37/596 (6%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+QA ++ +G+ D T L + G + V +F + + L +N ++ F +
Sbjct: 32 QIQAQLILHGIH-YDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDN 90
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGV--IHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + +FL+ L R + L +F I S +D G +H I +G L
Sbjct: 91 GLPKSSIFLYTHL-RKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLF 149
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVD 236
V +++V++YF+ A K+F + RD V WNT+I + + F ++ +++ M V
Sbjct: 150 VGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVG 209
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ F + TT V+ + A LQ LG I K L DV+V + L+ Y+KC
Sbjct: 210 LSF-DSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKG 268
Query: 297 HLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
+ F +I +++S+NA+I GY + + +++ L ELL G R N T ++ L F
Sbjct: 269 RILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPF 328
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
LQL LI +N +G ++ + L + +Y
Sbjct: 329 NHLQLSRLI-----QNLSLKIGIILQPSVSTALTT-----------------------VY 360
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
R + +L + + SWN +I+ NG + LF+ M ++ P+ T
Sbjct: 361 CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVT 419
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+LSAC++L L++G +HGLIK +E + S+ +V L+DMY KCGSI + ++F+ M D
Sbjct: 420 SILSACAQLGALSIGKWVHGLIK-SERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVD 478
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+NV+TW A+I+ GL+G + AL+ F EM G P V +++L AC H GLV EG E+
Sbjct: 479 KNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEI 538
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
F M +YG +P +HY C+VD+L R G L A + I MP P +W L C
Sbjct: 539 FHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGAC 594
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 225/461 (48%), Gaps = 26/461 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+R+ V +N++IS +SR Y ED++R+F+ M++ G T +L+ A+
Sbjct: 174 MPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTA-------VAE 226
Query: 61 LQASVLKNGLFC--------ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
LQ L G+ C +D +V T L+ LY + G + +F+ + + L+++N++
Sbjct: 227 LQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAM 286
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+S + + E + LF EL+ S + S+ VG+I L+ I L +K G
Sbjct: 287 ISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGI 346
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ V+ +L +Y + + A ++F + + + SWN +I ++ +A+ L+
Sbjct: 347 ILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQE 406
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M + PN T ++++CA L +GK +H + LE +V+V +ALVD YAKC +
Sbjct: 407 MMPQLS-PNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGS 465
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
+ A F + +KN+V+WNA+I GY ++ L E+LQ G P TF +L +
Sbjct: 466 IVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYA 525
Query: 352 SLAFQLLQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PRAV 405
L+ H + G++ ++ ++G +++AL F+ + + P
Sbjct: 526 CSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPA 585
Query: 406 VPANIIAG--IYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
V ++ I+ T N K L QL+ P+ V + ++++
Sbjct: 586 VWGALLGACMIHKNTEMANVASKRLFQLD-PENVGYYVLLS 625
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/507 (23%), Positives = 232/507 (45%), Gaps = 44/507 (8%)
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
L+N L QI +I +G Y+L L + +F + ++F V D+ +
Sbjct: 21 LNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLF 80
Query: 211 NTIIGALAESENFGKALELY--LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
N +I +++ ++ LY LR ++ P+ T+ + I++ + L++ +G +HA
Sbjct: 81 NVLIRGFSDNGLPKSSIFLYTHLRKKTNLR-PDNFTYAFAISAASRLEDERVGVLLHAHS 139
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSI 327
I + + ++FVGSA+VD Y K E A F + ++ V WN +I G++ S SI
Sbjct: 140 IVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSI 199
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSY 383
+ +++L +G + T + VL + Q +L CL + G + YVL
Sbjct: 200 RVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVL------- 252
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
+GLIS +Y++ G+ + L Q+++PD++S+N +I
Sbjct: 253 --TGLIS-----------------------LYSKCGKSCKGRILFDQIDQPDLISYNAMI 287
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
+ N + + + LF+ + A+ ++ T V L+ +L L + L K II
Sbjct: 288 SGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGII 347
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFRE 563
+ V L +Y + + + ++F+E ++++ +W A+IS NG RA+ F+E
Sbjct: 348 LQPS-VSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQE 406
Query: 564 MEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYG 623
M P+ V + ++L+AC G + G + + +S +E + +VD+ + G
Sbjct: 407 M-MPQLSPNPVTVTSILSACAQLGALSIG-KWVHGLIKSERLESNVYVSTALVDMYAKCG 464
Query: 624 HLKEAEKIITTMPFPPNALIWRTFLEG 650
+ EA ++ M N + W + G
Sbjct: 465 SIVEARQLFDLM-VDKNVVTWNAMITG 490
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 172/561 (30%), Positives = 283/561 (50%), Gaps = 35/561 (6%)
Query: 105 SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIH 164
+L TWNS G ++ + LF ++ +S + S+F V+ + L + IH
Sbjct: 17 TLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIH 76
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
V+K+ F + V + V+MY +C + A +F ++ +RD+ SWN ++ A+S
Sbjct: 77 AHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLD 136
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
+ L M + + P+ T + +I+S +++ ++++ I+ + DV V + L+
Sbjct: 137 RLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLI 196
Query: 285 DFYAKCDNLEGAHLCFSEISN--KNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPN 341
Y+KC NL A F EI++ +++VSWN++I YA+ + ++ +L G+ P+
Sbjct: 197 AAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPD 256
Query: 342 EFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
T ++L S + + L H L++ + K G SD
Sbjct: 257 ISTILNLLSSCMQPKAL-FHGLLVH--------------SHGVKLGCDSD---------- 291
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
V N + +Y++ G + L + + VSW ++I+A A G E + LF
Sbjct: 292 ---VCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNA 348
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M AA PD T ++L+S C + L LG + + + VCN LIDMY KCG
Sbjct: 349 MEAAGEKPDLVTVLALISGCGQTGALELGKWIDNY-SINNGLKDNVVVCNALIDMYAKCG 407
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ ++F M +R V++WT +I+A LNG + ALE F M +G KP+ + +AVL
Sbjct: 408 GFNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQ 467
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC HGGLV G+E F M + YG+ P +DHY C+VDLL R GHL+EA +II +MPF P++
Sbjct: 468 ACAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDS 527
Query: 642 LIWRTFLEGCQ---RCRIAKY 659
IW L C+ + + KY
Sbjct: 528 GIWSALLSACKLHGKMEMGKY 548
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 156/600 (26%), Positives = 280/600 (46%), Gaps = 81/600 (13%)
Query: 20 GYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQL-QASVLKNGLFCADAFV 77
G+ ++AL +F M G P TF +L +C L+ + +Q+ A VLK+ F ++ FV
Sbjct: 32 GHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHVLKS-CFQSNIFV 90
Query: 78 GTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEV 137
TA + +Y + G L++ +VF +MP + + +WN+++ F + GF++ L + S +
Sbjct: 91 QTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGI 150
Query: 138 ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEK 197
+ + +I + + L ++ I+ G ++ VAN+L+ Y +C + SAE
Sbjct: 151 RPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAET 210
Query: 198 MFKDVE--IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
+F ++ +R VVSWN++I A A E KA+ Y M P+ +T + +++SC
Sbjct: 211 LFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQP 270
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
+ G +H+ +K + DV V + L+ Y+KC ++ A F+ +S+K VSW +I
Sbjct: 271 KALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMI 330
Query: 316 LGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEY 374
YA K + L ++ G +P+ L+ + LI G +
Sbjct: 331 SAYAEKGYMSEAMTLFNAMEAAGEKPD---------------LVTVLALISGCG-QTGAL 374
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
LG + +Y+ + + D VV N + +Y + G +N+ +L +
Sbjct: 375 ELGKWIDNYSINNGLKD------------NVVVCNALIDMYAKCGGFNDAKELFYTMANR 422
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
+VSW +I ACA NGD K+ LELF M + P++ TF+++L AC+ H
Sbjct: 423 TVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACA-----------H 471
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT-----WTALISALG 549
G G + ++ FN MT + I ++ ++ LG
Sbjct: 472 G-------------------------GLVERGLECFNMMTQKYGINPGIDHYSCMVDLLG 506
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
G + ALE + M F+PD A+L+AC+ G + G + E++ + +EP++
Sbjct: 507 RKGHLREALEIIKSMP---FEPDSGIWSALLSACKLHGKMEMGKYVSEQL---FELEPQV 560
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 136/276 (49%), Gaps = 18/276 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP---VEGAQ 60
R+VVS+NS+I+AY+ A+ + M++ GF P T LLS + P G
Sbjct: 220 RSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLS-SCMQPKALFHGLL 278
Query: 61 LQASVLKNGLFC-ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + +K G C +D V L+ +Y + G + +F M K+ V+W ++S + +
Sbjct: 279 VHSHGVKLG--CDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEK 336
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G++ + M LF + + + + +I G LE G+ I I NG ++V
Sbjct: 337 GYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVC 396
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L++MY +C G A+++F + R VVSW T+I A A + + ALEL+ M +
Sbjct: 397 NALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMK 456
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
PN TF+ V+ +CA H +++ LEC
Sbjct: 457 PNHITFLAVLQACA-----------HGGLVERGLEC 481
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 8/181 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M D+ VS+ +ISAY+ GY+ +A+ +F M G +P T L+S C +E G
Sbjct: 318 MSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELG 377
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + NGL + V AL+ +Y + G ++ +F M +++V+W ++++
Sbjct: 378 KWIDNYSINNGLK-DNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACAL 436
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVI----HGLSNEQDLE-FGEQIHGLVIKNGFD 173
+G V+D + LF ++ + +F+ V+ HG E+ LE F I G D
Sbjct: 437 NGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGID 496
Query: 174 Y 174
+
Sbjct: 497 H 497
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 21/135 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M +R VVS+ ++I+A + G V+DAL +F M+ G +P TF +L A
Sbjct: 419 MANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQ---------AC 469
Query: 61 LQASVLKNGLFCADAFVG-----------TALLGLYGRHGCLDEVVSVFEDMP-RKSLVT 108
+++ GL C + + ++ L GR G L E + + + MP
Sbjct: 470 AHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGI 529
Query: 109 WNSIVSIFGKHGFVE 123
W++++S HG +E
Sbjct: 530 WSALLSACKLHGKME 544
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 194/618 (31%), Positives = 293/618 (47%), Gaps = 44/618 (7%)
Query: 47 LLSCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS 105
LL C ++ G + A +L+ G F + ++ +L+ LY + G + + VFE + K
Sbjct: 17 LLRCTRQKDLQKGKAIHAQLLRTGSF-SSVYLTNSLVNLYAKCGSIVKAKLVFESITNKD 75
Query: 106 LVTWNSIVSIFGKHGFV--EDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQ 162
+V+WN +++ + + G V M LF + +R+E L +F GV S+ + G Q
Sbjct: 76 VVSWNCLINGYSQKGTVGYSFVMELF-QRMRAENTLPNGHTFSGVFTAASSSPETFGGLQ 134
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
H L IK Y++ V +SL+NMY + + A K+F + R+ VSW TII A
Sbjct: 135 AHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERM 194
Query: 223 FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSA 282
+A EL+ M + ++ + V+++ GK IH +KN L VG+A
Sbjct: 195 AFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNA 254
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPN 341
LV Y KC L+ A F +K+ ++W+A+I GYA L + L G +P+
Sbjct: 255 LVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPS 314
Query: 342 EFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
EFTF V+ + L Q+H ++ GYE Y + +L+ YAK G + DA
Sbjct: 315 EFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDA----- 369
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
R G L+ PDIV W +I+ A NG+ + L
Sbjct: 370 -------------------RKG--------FDYLKEPDIVLWTSMISGYAQNGENETALT 402
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
L+ M+ RI P T S+L ACS L L G +H K S + + + L MY
Sbjct: 403 LYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGF-SLEVPIGSALSTMY 461
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
KCGS+ +F M R+++TW A+IS L NG +ALE F E+ KPD V +
Sbjct: 462 AKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFV 521
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
VL+AC H GLV G F M +G+ P ++HY C+VD+L R G L E ++ I +
Sbjct: 522 NVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATI 581
Query: 638 PPNALIWRTFLEGCQRCR 655
+WR L C+ R
Sbjct: 582 DHGMCLWRILLGACRNYR 599
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 165/565 (29%), Positives = 276/565 (48%), Gaps = 59/565 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE--PTQFTFGGLLSCDSLNPVE- 57
+ +++VVS+N +I+ YS+ G V + M L+ R P TF G+ + S +P
Sbjct: 71 ITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETF 130
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G Q A +K F D FVG++L+ +Y + GC+ + VF+ +P ++ V+W +I+S +
Sbjct: 131 GGLQAHALAIKTSNF-YDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGY 189
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ LF + R E A + + V+ L+ + +G+QIH L +KNG
Sbjct: 190 AMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIA 249
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V N+LV MY +C + A K F+ +D ++W+ +I A++ + +AL L+ M ++
Sbjct: 250 SVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLN 309
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
P++ TFV VIN+C+ + GK IH +K EC ++ +ALVD YAKC +L A
Sbjct: 310 GNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDA 369
Query: 297 HLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLR--SSL 353
F + +IV W ++I GYA + T++ L + P+E T + VLR SSL
Sbjct: 370 RKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSL 429
Query: 354 AF--QLLQLHCLIIRMGYENYEYVLGS-LMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
A Q Q+H I+ G+ + E +GS L T YAK G + D N+
Sbjct: 430 AALEQGKQIHAQTIKYGF-SLEVPIGSALSTMYAKCGSLED----------------GNL 472
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ ++ DI++WN +I+ + NG+ + LELF+ +R PD
Sbjct: 473 V----------------FRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPD 516
Query: 471 NYTFVSLLSACSKLCNLALGS-------SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
TFV++LSACS + + G G++ + E + C ++D+ + G +
Sbjct: 517 YVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVE-----HYAC--MVDILSRAGKL 569
Query: 524 GSSVKIFNEMT-DRNVITWTALISA 547
+ + T D + W L+ A
Sbjct: 570 HETKEFIESATIDHGMCLWRILLGA 594
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/518 (27%), Positives = 239/518 (46%), Gaps = 48/518 (9%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
SFV ++ + ++DL+ G+ IH +++ G + + NSLVN+Y +C I A+ +F+ +
Sbjct: 12 SFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESI 71
Query: 203 EIRDVVSWNTIIGALAESENFGKA--LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
+DVVSWN +I ++ G + +EL+ RM + PN TF V + + +
Sbjct: 72 TNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFG 131
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
G HA IK + DVFVGS+L++ Y K + A F I +N VSW +I GYA
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAM 191
Query: 321 KSSPTSIFLLIELLQLGYRP----NEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENY 372
+ F EL L R ++F ++ VL + L+ Q+HCL ++ G +
Sbjct: 192 ERMA---FEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSI 248
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
V +L+T Y K G + DAL +T +L
Sbjct: 249 ASVGNALVTMYGKCGCLDDAL-----------------------------KTFELSGD-- 277
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
D ++W+ +I A GD E L LF M P +TFV +++ACS + L G
Sbjct: 278 -KDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQ 336
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+HG K + L+DMY KCGS+ + K F+ + + +++ WT++IS NG
Sbjct: 337 IHGYSLKAG-YECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNG 395
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY 612
+ AL + M+ P + + +VL AC + +G ++ + + YG E+
Sbjct: 396 ENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIK-YGFSLEVPIG 454
Query: 613 HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + + G L++ + MP + + W + G
Sbjct: 455 SALSTMYAKCGSLEDGNLVFRRMP-SRDIMTWNAMISG 491
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 249/513 (48%), Gaps = 20/513 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
+P+RN VS+ +IIS Y+ +A +F M +F + +LS ++ + G
Sbjct: 174 IPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYG 233
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ LKNGL + A VG AL+ +YG+ GCLD+ + FE K +TW+++++ + +
Sbjct: 234 KQIHCLALKNGLL-SIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQ 292
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + LF + + +E +FVGVI+ S+ LE G+QIHG +K G++ ++
Sbjct: 293 AGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYF 352
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LV+MY +C + A K F ++ D+V W ++I A++ AL LY RM ++ +
Sbjct: 353 MTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERI 412
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ T V+ +C+ L GK IHA+ IK +V +GSAL YAKC +LE +L
Sbjct: 413 MPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNL 472
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQL 357
F + +++I++WNA+I G + L E L+ G +P+ TF +VL + L
Sbjct: 473 VFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGL 532
Query: 358 LQLHCLIIRMGYENYEYV-----LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
++ + RM + + V ++ +++G + + F+ + I + I+
Sbjct: 533 VERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILL 592
Query: 413 GI------YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
G Y E + L E + + + A + D + V L K +R
Sbjct: 593 GACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMK-LRGVN 651
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
P S + S++ +G +H I K
Sbjct: 652 KEPG----CSWIELKSQVHVFVVGDQIHPQIVK 680
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 196/426 (46%), Gaps = 44/426 (10%)
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M++ ++ P +FV ++ C ++ GK+IHA++++ V++ ++LV+ YAKC +
Sbjct: 1 MNLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 60
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL----GYRPNEFTFSHV 348
+ A L F I+NK++VSWN LI GY+ K + F++ EL Q PN TFS V
Sbjct: 61 IVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVM-ELFQRMRAENTLPNGHTFSGV 119
Query: 349 L----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
S F LQ H L I+ +V SL+ Y K G + DA
Sbjct: 120 FTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDAR----------- 168
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
K+ + + VSW +I+ A E ELF MR
Sbjct: 169 ---------------------KVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRR 207
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
D + + S+LSA + + G +H L K ++S + V N L+ MYGKCG +
Sbjct: 208 EEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIAS-VGNALVTMYGKCGCLD 266
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
++K F D++ ITW+A+I+ G + AL F M G KP + V+ AC
Sbjct: 267 DALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACS 326
Query: 585 HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
G + EG ++ ++ G E ++ +VD+ + G L +A K + P+ ++W
Sbjct: 327 DIGALEEGKQIHGYSLKA-GYECQIYFMTALVDMYAKCGSLVDARKGFDYLK-EPDIVLW 384
Query: 645 RTFLEG 650
+ + G
Sbjct: 385 TSMISG 390
>gi|347954474|gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium officinale]
Length = 826
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 181/685 (26%), Positives = 334/685 (48%), Gaps = 46/685 (6%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNGL 70
+S+ S+ G + +AL + M R +G +L + G Q+ A +LKNG
Sbjct: 40 VSSLSKSGEIREALSLLTEMDFRKLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGD 99
Query: 71 FCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
F A + ++ T L+ Y + + +F + +++ +W +I+ + + G E+ + F
Sbjct: 100 FYAKNEYIETKLVIFYAKCDAFEASEVLFSKLRVRNVYSWAAIIGVKCRIGLCEEALMGF 159
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
E++++E+ V Q FG +HG V+K+G + VA+SL +MY +C
Sbjct: 160 VEMLQNEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKSGLHDCVFVASSLADMYGKC 219
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A K+F ++ R+VV+WN ++ ++ +A+ L M + + P + T +
Sbjct: 220 GVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCL 279
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
++ A + GK HA I N LE D +G++ ++FY K +E A + F + K++V
Sbjct: 280 SASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCKVGLIEYAEMIFDRMIEKDVV 339
Query: 310 SWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL----HCLI 364
+WN LI GY + + +L++L + + T S ++ ++ Q L+L C
Sbjct: 340 TWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAARTQNLKLGKEVQCYC 399
Query: 365 IRMGYEN------------------------YEYVLG-------SLMTSYAKSGLISDAL 393
IR + + ++ VL +L++ YA+SGL +A
Sbjct: 400 IRHSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNTLLSVYAESGLSGEAF 459
Query: 394 AFVTAL---NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER----PDIVSWNIVIAAC 446
+ ++P + N+I + R GQ NE ++ SQ++ P++VSW ++
Sbjct: 460 RLFYEMQLESVPPNAITWNLIILSFLRNGQVNEAKEIFSQMQSSGIFPNLVSWTTMMNGL 519
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
NG +E + + M+ + + P+ ++ LSACS L +L G S+HG I + + SS
Sbjct: 520 VQNGCSEEAILFLRKMQESGLRPNAFSITVALSACSNLASLHFGRSVHGYIIRNQQHSSS 579
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
+ L+DMY KCG I + +F ++ + A+ISA LNG + A+ R +E
Sbjct: 580 VLIETSLVDMYAKCGDINKAEMVFRSKLCSDLPLYNAMISAYALNGNVKEAIALCRRLED 639
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
G KPD + ++L+AC H G V + +E+F M +G++P ++HY +VD+L G
Sbjct: 640 TGIKPDNITFTSLLSACNHAGDVSQAVEIFTDMVSKHGIKPCLEHYGLMVDILASAGETD 699
Query: 627 EAEKIITTMPFPPNALIWRTFLEGC 651
+A ++I MP+ +A + ++ + C
Sbjct: 700 KALRLIEEMPYKSDARMIQSLVASC 724
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 158/622 (25%), Positives = 278/622 (44%), Gaps = 121/622 (19%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPV-EG 58
+P+RNVV++N+++ Y + G E+A+R+ M G EPT+ T LS + ++ + EG
Sbjct: 232 IPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMDGIEEG 291
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q A + NGL D +GT+ L Y + G ++ +F+ M K +VTWN ++S + +
Sbjct: 292 KQSHAIAIVNGLEL-DNILGTSNLNFYCKVGLIEYAEMIFDRMIEKDVVTWNLLISGYVQ 350
Query: 119 HGFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G VED + + C+L+R E + + ++ + Q+L+ G+++ I++ F +++
Sbjct: 351 QGLVEDAIHM-CQLMRLENLKYDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFASDIV 409
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+A++ V+MY C I A+K+F V +D++ WNT++ AES G+A L+ M ++
Sbjct: 410 LASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNTLLSVYAESGLSGEAFRLFYEMQLES 469
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN T+ +I S L+N G+ AK I
Sbjct: 470 VPPNAITWNLIILSF--LRN---GQVNEAKEI---------------------------- 496
Query: 298 LCFSEISNK----NIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
FS++ + N+VSW ++ G S +I L ++ + G RPN F+ + L S
Sbjct: 497 --FSQMQSSGIFPNLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFSITVAL--S 552
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L LH G + Y++ + ++ S LI +L
Sbjct: 553 ACSNLASLH-----FGRSVHGYIIRN--QQHSSSVLIETSL------------------V 587
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G N+ + D+ +N +I+A A NG+ KE + L + + I PDN
Sbjct: 588 DMYAKCGDINKAEMVFRSKLCSDLPLYNAMISAYALNGNVKEAIALCRRLEDTGIKPDNI 647
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF SLLSAC+ G + +V+IF +
Sbjct: 648 TFTSLLSACN------------------------------------HAGDVSQAVEIFTD 671
Query: 533 MTDRNVIT-----WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
M ++ I + ++ L G +AL EM +K D + +++ +C
Sbjct: 672 MVSKHGIKPCLEHYGLMVDILASAGETDKALRLIEEMP---YKSDARMIQSLVASCN--- 725
Query: 588 LVREGMELFERMNRS-YGVEPE 608
++ EL + ++R EPE
Sbjct: 726 -MKHKTELMDFLSRHLLETEPE 746
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 182/664 (27%), Positives = 322/664 (48%), Gaps = 48/664 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR----GFEPTQFTFGGLL-SCDSLNP 55
MP R V S+N++I A G +A+ ++ M G P T +L +C +
Sbjct: 119 MPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGD 178
Query: 56 VE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-KSLVTWNSIV 113
G+++ +K+GL V AL+G+Y + G LD + VFE M + + +WNS +
Sbjct: 179 GRCGSEVHGLAVKSGLD-RSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAI 237
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
S ++G + + LF + ++ + VGV+ + L G ++H ++K G +
Sbjct: 238 SGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTE 297
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ + N+L+ MY +C + SA ++F+++ +D +SWN+++ ++ + +A++ + M
Sbjct: 298 FNIQC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEM 356
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ P+ V ++++ L I G+ +HA +K L+ D+ + + L+D Y KC ++
Sbjct: 357 VQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSV 416
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSS 352
E + F + K+ VSW +I YA S + Q G + + +L +
Sbjct: 417 ECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEAC 476
Query: 353 LAFQ----LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ L Q+H IR G + ++
Sbjct: 477 SGLKSISLLKQVHSYAIRNGLLD---------------------------------LILK 503
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N I IY G+ + + L++ DIV+W ++ A NG E + LF M A I
Sbjct: 504 NRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQ 563
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD+ V +L A + L +L G +HG + + + + V + L+DMY CGS+ ++K
Sbjct: 564 PDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKF-PVEGAVVSSLVDMYSGCGSMNYALK 622
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F+E ++V+ WTA+I+A G++G ++A+ F+ M G PD V+ +A+L AC H L
Sbjct: 623 VFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKL 682
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
V EG + M Y ++P +HY CVVDLL R G +EA K I +MP P +++W L
Sbjct: 683 VDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALL 742
Query: 649 EGCQ 652
C+
Sbjct: 743 GACR 746
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 168/594 (28%), Positives = 285/594 (47%), Gaps = 44/594 (7%)
Query: 2 PDRNVVSFNSIISAYSRC--GYVEDALRMFLYMINRGFEPTQFT-FGGLLSCDSLNPV-- 56
P R + ++ S C G + +ALR RG P +G +L ++
Sbjct: 13 PRRKLPPASAGASLRQLCKDGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVS 72
Query: 57 EGAQLQASVLKNGLFCAD--AFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
EG QL A + G D F+ T LL +YG+ G L + +F+ MP +++ +WN+++
Sbjct: 73 EGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIG 132
Query: 115 IFGKHGFVEDCMFLFCELVRSE----VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
G + + ++ + SE A + V+ E D G ++HGL +K+
Sbjct: 133 ACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKS 192
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALEL 229
G D LVAN+LV MY +C + SA ++F+ + + RDV SWN+ I ++ F +AL+L
Sbjct: 193 GLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDL 252
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
+ RM D N T V V+ CA L G+ +HA ++K E ++ + LV YA+
Sbjct: 253 FRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCNALLV-MYAR 311
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
C ++ A F EI +K+ +SWN+++ Y ++ +I E++Q G+ P+ H
Sbjct: 312 CGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPD-----HA 366
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
SL + L LI G E + Y + K L SD L I A
Sbjct: 367 CIVSLLSAVGHLGRLI--NGREVHAYAV--------KQRLDSD-------LQI------A 403
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N + +Y + + ++ ++ D VSW +IA A + Y E + F+ + I
Sbjct: 404 NTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIK 463
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
D S+L ACS L +++L +H + ++ D + N +ID+YG+CG + ++
Sbjct: 464 VDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLL--DLILKNRIIDIYGECGEVCYALN 521
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
IF + ++++TWT++++ NG A+ F +M G +PD VAL+ +L A
Sbjct: 522 IFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGA 575
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 151/322 (46%), Gaps = 22/322 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPVEGA 59
+ +++V++ S+++ ++ G + +A+ +F M+N G +P G+L L+ +
Sbjct: 526 LDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKG 585
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ L G F + V ++L+ +Y G ++ + VF++ K +V W ++++ G H
Sbjct: 586 KEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMH 645
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + +++F ++ + V+ SF+ +++ S+ + ++ G+ +++ Y+L
Sbjct: 646 GHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSK---YKLQPW 702
Query: 180 NS----LVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRMS 234
+V++ + A K K + + V W ++GA +N A+ ++
Sbjct: 703 QEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKL- 761
Query: 235 VDIVFPNQTTFVYVINSCA--GLQNSILGKSIHAKVIKNALECD-----VFVGSALVDFY 287
+++ N +V V N A G N++ K I K+ + L D + +G+ + F
Sbjct: 762 LELEPDNPGNYVLVSNVFAEMGKWNNV--KEIRTKMTEQGLRKDPACSWIEIGNTVHTFT 819
Query: 288 AKCD---NLEGAHLCFSEISNK 306
A+ + + HL +EI+ K
Sbjct: 820 ARDHSHRDSQAIHLKLAEITEK 841
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 165/571 (28%), Positives = 291/571 (50%), Gaps = 38/571 (6%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
+ G L + +F+ M ++ V+W ++ + + ++ L+ ++ R + + V
Sbjct: 86 KFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVT 145
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
++ G + QIH VIK G++Y L+V NSLV+ Y + ++ A ++FK + +D
Sbjct: 146 LLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKD 205
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
V++N+++ + +A+EL+L + + P+ TF ++++ GL ++ G+ +H
Sbjct: 206 TVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHG 265
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS 326
V+K +VFVG+AL+D+Y+K D ++ F E+ + +S+N +I YA
Sbjct: 266 FVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKE 325
Query: 327 IFLLIELLQLG-YRPNEFTFSHVLR---SSLAFQL-LQLHCLIIRMGYENYEYVLGSLMT 381
F L LQ + +F F+ +L SSL ++ Q+HC I +G N+E +
Sbjct: 326 SFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVG-ANFESRV----- 379
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
N + +Y + E K+ + V W
Sbjct: 380 --------------------------ENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTA 413
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I+A G ++E + +F MR + D TF S+L AC+ L +++LG LH L+ ++
Sbjct: 414 MISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSG 473
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
+S + + + L+D Y KCG + ++K F EM +RN ++W ALISA NG L F
Sbjct: 474 FMS-NVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSF 532
Query: 562 REMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR 621
++M G+KPD V+ ++VL+AC H G V E + F M + Y V P+ +HY +VD+L R
Sbjct: 533 QQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCR 592
Query: 622 YGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G EAEK++T MPF P+ ++W + L C+
Sbjct: 593 NGRFDEAEKLMTEMPFEPSEIMWSSVLNSCR 623
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 228/454 (50%), Gaps = 40/454 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCD-SLNPVE-G 58
M +++ V+FNS+++ YS G E+A+ +FL + N G +P+ FTF LLS L+ + G
Sbjct: 201 MLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFG 260
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ VLK F + FVG ALL Y +H +DEV +F +MP +++N +++ +
Sbjct: 261 QQVHGFVLKTN-FVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAW 319
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G ++ LF +L + + F ++ ++ +L G QIH I G ++E V
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRV 379
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LV+MY +C G A+K+F ++ + V W +I A + + + ++ M V
Sbjct: 380 ENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGV 439
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+Q TF ++ +CA L + LG+ +H+ +I++ +V+ GSAL+D YAKC + A
Sbjct: 440 PADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIK 499
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F E+ +N VSWNALI YA + ++ +++Q GY+P+ +F VL +
Sbjct: 500 SFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSAC----- 554
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAG 413
HC G + +AL ++ V P +
Sbjct: 555 --SHC------------------------GFVEEALWHFNSMTQIYEVTPKREHYTSMVD 588
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
+ R G+++E KL++++ P + W+ V+ +C
Sbjct: 589 VLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSC 622
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 152/598 (25%), Positives = 267/598 (44%), Gaps = 88/598 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS----CDSLNPV 56
M +R VS+ +I Y + ++A R++ M G EP T LLS ++ N +
Sbjct: 100 MVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVI 159
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
Q+ V+K G + + V +L+ Y + CL +F+ M K VT+NS+++ +
Sbjct: 160 --VQIHTHVIKLG-YEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGY 216
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G E+ + LF EL S + ++ +F ++ D +FG+Q+HG V+K F + +
Sbjct: 217 SNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNV 276
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V N+L++ Y + + K+F ++ D +S+N +I + A + F ++ +L+ ++
Sbjct: 277 FVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFT 336
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
Q F +++ N +G+ IH + I + V +ALVD YAKC+ + A
Sbjct: 337 RFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEA 396
Query: 297 HLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F I+ K+ V W A+I Y K I + ++ + G ++ TF+ +LR+
Sbjct: 397 QKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANL 456
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ QLH L+IR G+ + Y +L+ +YAK G ++DA
Sbjct: 457 ASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDA------------------- 497
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+K ++ + VSWN +I+A A NG+ L F+ M + PD+
Sbjct: 498 -------------IKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDS 544
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+F+S+LSACS CG + ++ FN
Sbjct: 545 VSFLSVLSACS------------------------------------HCGFVEEALWHFN 568
Query: 532 EMTDRNVIT-----WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
MT +T +T+++ L NG A + EM F+P + +VL +CR
Sbjct: 569 SMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMP---FEPSEIMWSSVLNSCR 623
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 230/496 (46%), Gaps = 33/496 (6%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVA-NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
LE G+ +H + + + ++ N +++ + + + A ++F + R VSW +IG
Sbjct: 54 LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+S +A LY M + P+ T V +++ L+ + IH VIK E
Sbjct: 114 GYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY 173
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELL 334
++ V ++LVD Y K L A F + NK+ V++N+L+ GY+++ + +I L +EL
Sbjct: 174 NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELH 233
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
G +P++FTF+ +L +++ + G + + +VL +
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLD-------DTKFGQQVHGFVLKT---------------- 270
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
N V N + Y++ Q +E KL ++ D +S+N+VI + A NG +KE
Sbjct: 271 -----NFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKE 325
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
+LF+ ++ R + F +LLS + NL +G +H T + ++ V N L+
Sbjct: 326 SFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIH-CQAITVGANFESRVENALV 384
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
DMY KC + KIF+ + ++ + WTA+ISA G + + F +M G D+
Sbjct: 385 DMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQA 444
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
++L AC + + G +L + RS G + ++D + G + +A K
Sbjct: 445 TFASILRACANLASISLGRQLHSLLIRS-GFMSNVYSGSALLDTYAKCGCMTDAIKSFGE 503
Query: 635 MPFPPNALIWRTFLEG 650
MP N++ W +
Sbjct: 504 MP-ERNSVSWNALISA 518
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 181/596 (30%), Positives = 291/596 (48%), Gaps = 37/596 (6%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+QA ++ +G+ D T L + G + V +F + + L +N ++ F +
Sbjct: 32 QIQAQLILHGIH-YDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDN 90
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGV--IHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + +FL+ L R L +F I S +D G +H I +G L
Sbjct: 91 GLPKSSIFLYTHL-RKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLF 149
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVD 236
V +++V++YF+ A K+F + RD V WNT+I + + F ++ +++ M V
Sbjct: 150 VGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVG 209
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ F + TT V+ + A LQ LG I K L DV+V + L+ Y+KC
Sbjct: 210 LSF-DSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKG 268
Query: 297 HLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
+ F +I +++S+NA+I GY + + +++ L ELL G R N T ++ L F
Sbjct: 269 RILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPF 328
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
LQL LI +N +G ++ + L + +Y
Sbjct: 329 NHLQLSRLI-----QNLSLKIGIILQPSVSTALTT-----------------------VY 360
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
R + +L + + SWN +I+ NG + LF+ M ++ P+ T
Sbjct: 361 CRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVT 419
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+LSAC++L L++G +HGLIK +E + S+ +V L+DMY KCGSI + ++F+ M D
Sbjct: 420 SILSACAQLGALSIGKWVHGLIK-SERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVD 478
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+NV+TW A+I+ GL+G + AL+ F EM G P V +++L AC H GLV EG E+
Sbjct: 479 KNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEI 538
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
F M +YG +P +HY C+VD+L R G L A + I MP P +W L C
Sbjct: 539 FHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGAC 594
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 225/461 (48%), Gaps = 26/461 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+R+ V +N++IS +SR Y ED++R+F+ M++ G T +L+ A+
Sbjct: 174 MPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTA-------VAE 226
Query: 61 LQASVLKNGLFC--------ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
LQ L G+ C +D +V T L+ LY + G + +F+ + + L+++N++
Sbjct: 227 LQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAM 286
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+S + + E + LF EL+ S + S+ VG+I L+ I L +K G
Sbjct: 287 ISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGI 346
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ V+ +L +Y + + A ++F + + + SWN +I ++ +A+ L+
Sbjct: 347 ILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQE 406
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M + PN T ++++CA L +GK +H + LE +V+V +ALVD YAKC +
Sbjct: 407 MMPQLS-PNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGS 465
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
+ A F + +KN+V+WNA+I GY ++ L E+LQ G P TF +L +
Sbjct: 466 IVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYA 525
Query: 352 SLAFQLLQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PRAV 405
L+ H + G++ ++ ++G +++AL F+ + + P
Sbjct: 526 CSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPA 585
Query: 406 VPANIIAG--IYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
V ++ I+ T N K L QL+ P+ V + ++++
Sbjct: 586 VWGALLGACMIHKNTEMANVASKRLFQLD-PENVGYYVLLS 625
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/507 (23%), Positives = 232/507 (45%), Gaps = 44/507 (8%)
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
L+N L QI +I +G Y+L L + +F + ++F V D+ +
Sbjct: 21 LNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLF 80
Query: 211 NTIIGALAESENFGKALELY--LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
N +I +++ ++ LY LR ++ P+ T+ + I++ + L++ +G +HA
Sbjct: 81 NVLIRGFSDNGLPKSSIFLYTHLRKXTNLR-PDNFTYAFAISAASRLEDERVGVLLHAHS 139
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSI 327
I + + ++FVGSA+VD Y K E A F + ++ V WN +I G++ S SI
Sbjct: 140 IVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSI 199
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSY 383
+ +++L +G + T + VL + Q +L CL + G + YVL
Sbjct: 200 RVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVL------- 252
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
+GLIS +Y++ G+ + L Q+++PD++S+N +I
Sbjct: 253 --TGLIS-----------------------LYSKCGKSCKGRILFDQIDQPDLISYNAMI 287
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
+ N + + + LF+ + A+ ++ T V L+ +L L + L K II
Sbjct: 288 SGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGII 347
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFRE 563
+ V L +Y + + + ++F+E ++++ +W A+IS NG RA+ F+E
Sbjct: 348 LQPS-VSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQE 406
Query: 564 MEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYG 623
M P+ V + ++L+AC G + G + + +S +E + +VD+ + G
Sbjct: 407 M-MPQLSPNPVTVTSILSACAQLGALSIG-KWVHGLIKSERLESNVYVSTALVDMYAKCG 464
Query: 624 HLKEAEKIITTMPFPPNALIWRTFLEG 650
+ EA ++ M N + W + G
Sbjct: 465 SIVEARQLFDLM-VDKNVVTWNAMITG 490
>gi|413918395|gb|AFW58327.1| hypothetical protein ZEAMMB73_709604 [Zea mays]
Length = 906
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 179/669 (26%), Positives = 338/669 (50%), Gaps = 21/669 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE---PTQFTFGGLL-SCDSLNPV 56
M + V +N +I+A SR G EDA +F M++ G PT T ++ +C +
Sbjct: 132 MARPDAVCWNILITACSRRGLFEDAFILFRSMLSCGVGQGMPTAVTVAVIVPACAKWRHL 191
Query: 57 E-GAQLQASVLKNGLFCADAFVGTALLGLYGRHG---CLDEVVSVFEDMPRKSLVTWNSI 112
+ G + V+K GL +D G AL+ +Y + G + + F + K +V+WNS+
Sbjct: 192 QTGRSVHCYVVKTGLE-SDTLCGNALVSMYAKCGGSRVMVDAHRAFSSIRCKDVVSWNSV 250
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS-NEQDLEFGEQIHGLVIKNG 171
++ + ++ + + LF +++ S+ ++ S E G+++H V+++G
Sbjct: 251 IAGYIENQLFGEALALFSQMISQGYLPNYSTVASILPVCSFTEFGRHHGKEVHSFVVRHG 310
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
+ ++ V+N+L+ Y + + E +F +++RD+VSWNTII + +AL L+
Sbjct: 311 MEIDVSVSNALMTHYSKVLEMKDVESIFTSMDVRDIVSWNTIIAGYVMNGYHHRALGLFQ 370
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
+ + P+ +F+ ++ +CA + + G +H + + + + + +ALV FY+ CD
Sbjct: 371 GLLSTGIAPDSVSFISLLTACAQVGDVKTGMEVHGYIFQRPVLQETSLMNALVTFYSHCD 430
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRP---NEFTFSH 347
+ A F++I NK+ +SWNA++ A S+ F+L+ + G + T +
Sbjct: 431 RFDDAFRAFTDILNKDSISWNAILSACATSEQHIEKFFVLMSEMCRGVNQCQWDSVTVLN 490
Query: 348 VLRSSL---AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
V+ S + + H +R+GY V +++ +Y K G DA + + + R
Sbjct: 491 VIHMSTFCGIKMVREAHGWSLRVGYTGETSVANAILDAYVKCGYSHDA-SILFRNHAGRN 549
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+V NI+ Y ++ + + + + D+ SWN++I A N + LF ++++
Sbjct: 550 IVTDNIMISCYLKSNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQNDMDGQAFSLFNHLQS 609
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+ PD + ++L AC LC++ L H + + + D + L+D Y KCG+I
Sbjct: 610 EGLKPDIVSIANILEACIHLCSVQLVRQCHAYMLRASL--EDIHLEGALVDAYSKCGNIT 667
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
++ IF ++++T+TA+I ++G A+ A+E F +M L +PD V L +L+AC
Sbjct: 668 NAYNIFQISPKKDLVTFTAMIGCYAMHGMAEEAVELFSKMLKLDIRPDHVVLTTLLSACS 727
Query: 585 HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM-PFPPNALI 643
H GLV G+++F+ + + V P +HY C+VDLL R GH+++A M P NA
Sbjct: 728 HAGLVDAGIKIFKSIREIHRVVPTAEHYACMVDLLARSGHIQDAYMFALDMPPHAVNANA 787
Query: 644 WRTFLEGCQ 652
W + L C+
Sbjct: 788 WSSLLGACK 796
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 153/671 (22%), Positives = 281/671 (41%), Gaps = 90/671 (13%)
Query: 32 MINRGFEPTQFTFGGLLSCDSLNPVEGAQL----QASVLKNGLFCADAFVGTALLGLYGR 87
M+ G P + S P G+ L +K G + A V A++ YGR
Sbjct: 59 MLGEGHRPGALELAAAIRSSSALPGSGSALARCLHGLAVKAGRVASSATVAKAVMDAYGR 118
Query: 88 HGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVAL---TESSF 144
G L + + +F++M R V WN +++ + G ED LF ++ V T +
Sbjct: 119 FGSLADALLLFDEMARPDAVCWNILITACSRRGLFEDAFILFRSMLSCGVGQGMPTAVTV 178
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG---IWSAEKMFKD 201
++ + + L+ G +H V+K G + + L N+LV+MY +C G + A + F
Sbjct: 179 AVIVPACAKWRHLQTGRSVHCYVVKTGLESDTLCGNALVSMYAKCGGSRVMVDAHRAFSS 238
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ-NSIL 260
+ +DVVSWN++I E++ FG+AL L+ +M PN +T ++ C+ +
Sbjct: 239 IRCKDVVSWNSVIAGYIENQLFGEALALFSQMISQGYLPNYSTVASILPVCSFTEFGRHH 298
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
GK +H+ V+++ +E DV V +AL+ Y+K ++ F+ + ++IVSWN +I GY
Sbjct: 299 GKEVHSFVVRHGMEIDVSVSNALMTHYSKVLEMKDVESIFTSMDVRDIVSWNTIIAGYVM 358
Query: 321 KS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
++ L LL G P+ +F SL
Sbjct: 359 NGYHHRALGLFQGLLSTGIAPDSVSFI-------------------------------SL 387
Query: 380 MTSYAKSGLISDAL---AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
+T+ A+ G + + ++ + + N + Y+ ++++ + + + D
Sbjct: 388 LTACAQVGDVKTGMEVHGYIFQRPVLQETSLMNALVTFYSHCDRFDDAFRAFTDILNKDS 447
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC--SKLCNLALGSSLH 494
+SWN +++ACA + + E + + + V++L+ S C + + H
Sbjct: 448 ISWNAILSACATSEQHIEKFFVLMSEMCRGVNQCQWDSVTVLNVIHMSTFCGIKMVREAH 507
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCG-------------------------------SI 523
G + + +T V N ++D Y KCG I
Sbjct: 508 GWSLRVG-YTGETSVANAILDAYVKCGYSHDASILFRNHAGRNIVTDNIMISCYLKSNCI 566
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ IFN M ++++ +W +I N +A F ++ G KPD V++ +L AC
Sbjct: 567 EDAEVIFNHMAEKDLTSWNLMIQLYAQNDMDGQAFSLFNHLQSEGLKPDIVSIANILEAC 626
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYH---CVVDLLVRYGHLKEAEKIITTMPFPPN 640
H V+ R +Y + ++ H +VD + G++ A I P
Sbjct: 627 IHLCSVQ-----LVRQCHAYMLRASLEDIHLEGALVDAYSKCGNITNAYNIFQIS--PKK 679
Query: 641 ALIWRTFLEGC 651
L+ T + GC
Sbjct: 680 DLVTFTAMIGC 690
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 190/629 (30%), Positives = 303/629 (48%), Gaps = 82/629 (13%)
Query: 32 MINRGFEP----TQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGR 87
++ GF+P + F G L L+ QA L + + ++ Y +
Sbjct: 38 IVKTGFDPDTSRSNFRVGNFLKNGELS-------QARQLFEKMPHKNTVSTNMMISGYVK 90
Query: 88 HGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGV 147
G L E +F+ M ++ VTW ++ + + ++ LF ++ R TE +V
Sbjct: 91 SGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCG---TEPDYVTF 147
Query: 148 IHGLSNEQDLEFGEQIHGL---VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
+ LS E G QI + +IK G+D L+V N+LV+ Y + + A ++FK+
Sbjct: 148 VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKE--- 204
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+ E ++F TF V+ + GL + +LG+ I
Sbjct: 205 ------------MPEIDSF--------------------TFAAVLCANIGLDDIVLGQQI 232
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
H+ VIK +VFV +AL+DFY+K D++ A F E+ ++ VS+N +I GYA
Sbjct: 233 HSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKH 292
Query: 325 TSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSY 383
F L LQ + +F F+ +L S+A L MG + +
Sbjct: 293 KYAFDLFRELQFTAFDRKQFPFATML--SIASNTLDW-----EMGRQIH----------- 334
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
A VT + ++ N + +Y + G++ E + + L V W +I
Sbjct: 335 --------AQTIVTTAD--SEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMI 384
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
+A G Y+E L+LF MR A + D TF SLL A + + +L+LG LH I K+ +
Sbjct: 385 SAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFM 444
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFRE 563
S + F + L+D+Y KCGSI +V+ F EM DRN+++W A+ISA NG A+ L+ F+E
Sbjct: 445 S-NVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKE 503
Query: 564 MEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYG 623
M G +PD V+ + VL+AC H GLV EG+ F M + Y ++P +HY VVD+L R G
Sbjct: 504 MVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSG 563
Query: 624 HLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
EAEK++ MP P+ ++W + L C+
Sbjct: 564 RFNEAEKLMAEMPIDPDEIMWSSVLNACR 592
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 150/585 (25%), Positives = 266/585 (45%), Gaps = 93/585 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLN-PVEG 58
M +R V++ +I YS+ ++A +F+ M G EP TF LLS C+ +
Sbjct: 104 MVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQI 163
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+Q ++K G + + VG L+ Y + LD +F++MP
Sbjct: 164 TQVQTQIIKLG-YDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP---------------- 206
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
E F F ++ + + L D+ G+QIH VIK F + + V
Sbjct: 207 ----EIDSFTFAAVLCANIGL---------------DDIVLGQQIHSFVIKTNFVWNVFV 247
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N+L++ Y + + A K+F ++ +D VS+N II A A +L+ +
Sbjct: 248 SNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAF 307
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
Q F +++ + + +G+ IHA+ I + ++ VG++LVD YAKC E A +
Sbjct: 308 DRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEM 367
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+ +++++ V W A+I Y K + L ++ Q ++ TF+ +LR+S +
Sbjct: 368 IFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIAS 427
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L QLH II+ G+ + + +L+ YAK G I DA
Sbjct: 428 LSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDA--------------------- 466
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
V+ ++ +IVSWN +I+A A NG+ + L+ FK M + + PD+ +
Sbjct: 467 -----------VQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVS 515
Query: 474 FVSLLSACSK-------LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
F+ +LSACS L + + ++ L + E +S ++DM + G +
Sbjct: 516 FLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYAS-------VVDMLCRSGRFNEA 568
Query: 527 VKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFL 567
K+ EM D + I W+++++A ++ A+RA ++ ME L
Sbjct: 569 EKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEEL 613
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 165/571 (28%), Positives = 291/571 (50%), Gaps = 38/571 (6%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
+ G L + +F+ M ++ V+W ++ + + ++ L+ ++ R + + V
Sbjct: 86 KFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVT 145
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
++ G + QIH VIK G++Y L+V NSLV+ Y + ++ A ++FK + +D
Sbjct: 146 LLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKD 205
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
V++N+++ + +A+EL+L + + P+ TF ++++ GL ++ G+ +H
Sbjct: 206 TVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHG 265
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS 326
V+K +VFVG+AL+D+Y+K D ++ F E+ + +S+N +I YA
Sbjct: 266 FVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKE 325
Query: 327 IFLLIELLQLG-YRPNEFTFSHVLR---SSLAFQL-LQLHCLIIRMGYENYEYVLGSLMT 381
F L LQ + +F F+ +L SSL ++ Q+HC I +G N+E +
Sbjct: 326 SFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVG-ANFESRV----- 379
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
N + +Y + E K+ + V W
Sbjct: 380 --------------------------ENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTA 413
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I+A G ++E + +F MR + D TF S+L AC+ L +++LG LH L+ ++
Sbjct: 414 MISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSG 473
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
+S + + + L+D Y KCG + ++K F EM +RN ++W ALISA NG L F
Sbjct: 474 FMS-NVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSF 532
Query: 562 REMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR 621
++M G+KPD V+ ++VL+AC H G V E + F M + Y V P+ +HY +VD+L R
Sbjct: 533 QQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCR 592
Query: 622 YGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G EAEK++T MPF P+ ++W + L C+
Sbjct: 593 NGRFDEAEKLMTEMPFEPSEIMWSSVLNSCR 623
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 228/454 (50%), Gaps = 40/454 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCD-SLNPVE-G 58
M +++ V+FNS+++ YS G E+A+ +FL + N G +P+ FTF LLS L+ + G
Sbjct: 201 MLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFG 260
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ VLK F + FVG ALL Y +H +DEV +F +MP +++N +++ +
Sbjct: 261 QQVHGFVLKTN-FVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAW 319
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G ++ LF +L + + F ++ ++ +L G QIH I G ++E V
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRV 379
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LV+MY +C G A+K+F ++ + V W +I A + + + ++ M V
Sbjct: 380 ENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGV 439
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+Q TF ++ +CA L + LG+ +H+ +I++ +V+ GSAL+D YAKC + A
Sbjct: 440 PADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIK 499
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F E+ +N VSWNALI YA + ++ +++Q GY+P+ +F VL +
Sbjct: 500 SFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSAC----- 554
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAG 413
HC G + +AL ++ V P +
Sbjct: 555 --SHC------------------------GFVEEALWHFNSMTQIYEVTPKREHYTSMVD 588
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
+ R G+++E KL++++ P + W+ V+ +C
Sbjct: 589 VLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSC 622
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 152/598 (25%), Positives = 267/598 (44%), Gaps = 88/598 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS----CDSLNPV 56
M +R VS+ +I Y + ++A R++ M G EP T LLS ++ N +
Sbjct: 100 MVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVI 159
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
Q+ V+K G + + V +L+ Y + CL +F+ M K VT+NS+++ +
Sbjct: 160 --VQIHTHVIKLG-YEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGY 216
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G E+ + LF EL S + ++ +F ++ D +FG+Q+HG V+K F + +
Sbjct: 217 SNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNV 276
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V N+L++ Y + + K+F ++ D +S+N +I + A + F ++ +L+ ++
Sbjct: 277 FVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFT 336
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
Q F +++ N +G+ IH + I + V +ALVD YAKC+ + A
Sbjct: 337 RFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEA 396
Query: 297 HLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F I+ K+ V W A+I Y K I + ++ + G ++ TF+ +LR+
Sbjct: 397 QKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANL 456
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ QLH L+IR G+ + Y +L+ +YAK G ++DA
Sbjct: 457 ASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDA------------------- 497
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+K ++ + VSWN +I+A A NG+ L F+ M + PD+
Sbjct: 498 -------------IKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDS 544
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+F+S+LSACS CG + ++ FN
Sbjct: 545 VSFLSVLSACS------------------------------------HCGFVEEALWHFN 568
Query: 532 EMTDRNVIT-----WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
MT +T +T+++ L NG A + EM F+P + +VL +CR
Sbjct: 569 SMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMP---FEPSEIMWSSVLNSCR 623
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 230/496 (46%), Gaps = 33/496 (6%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVA-NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
LE G+ +H + + + ++ N +++ + + + A ++F + R VSW +IG
Sbjct: 54 LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+S +A LY M + P+ T V +++ L+ + IH VIK E
Sbjct: 114 GYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY 173
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELL 334
++ V ++LVD Y K L A F + NK+ V++N+L+ GY+++ + +I L +EL
Sbjct: 174 NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELH 233
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
G +P++FTF+ +L +++ + G + + +VL +
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLD-------DTKFGQQVHGFVLKT---------------- 270
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
N V N + Y++ Q +E KL ++ D +S+N+VI + A NG +KE
Sbjct: 271 -----NFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKE 325
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
+LF+ ++ R + F +LLS + NL +G +H T + ++ V N L+
Sbjct: 326 SFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIH-CQAITVGANFESRVENALV 384
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
DMY KC + KIF+ + ++ + WTA+ISA G + + F +M G D+
Sbjct: 385 DMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQA 444
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
++L AC + + G +L + RS G + ++D + G + +A K
Sbjct: 445 TFASILRACANLASISLGRQLHSLLIRS-GFMSNVYSGSALLDTYAKCGCMTDAIKSFGE 503
Query: 635 MPFPPNALIWRTFLEG 650
MP N++ W +
Sbjct: 504 MP-ERNSVSWNALISA 518
>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Glycine max]
Length = 714
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 169/560 (30%), Positives = 266/560 (47%), Gaps = 73/560 (13%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
QI ++K G D L V +L++ Y + A ++F+D+ DVVSWN +I ++
Sbjct: 64 QIQTQLLKRGIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHG 123
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
+ AL+L++ M + PNQTT ++ SC + + G+S+HA IK L D + +
Sbjct: 124 HPHDALQLFVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSN 183
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRP 340
AL YAKCD+LE + L F E+ KN++SWN +I Y ++ E+L+ G++P
Sbjct: 184 ALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQP 243
Query: 341 NEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAK--------------- 385
+ T +++ ++ + +HC II+ G+ V+ SL+ YAK
Sbjct: 244 SPVTMMNLMSANAVPE--TVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYP 301
Query: 386 -------SGLIS-------------------------DALAFVTALN------------- 400
+G+IS DA+A ++ L+
Sbjct: 302 TKDLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCA 361
Query: 401 ---------IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
+ + AN + Y+R + + L +++WN +I+ C G
Sbjct: 362 FHGYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGK 421
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+ +ELF M PD T SLLS C +L L +G +LHG I + + D F
Sbjct: 422 SSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVED-FTGT 480
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
LIDMY KCG + + KIF + D ++TW ++IS L G +A F +++ G +P
Sbjct: 481 ALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEP 540
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D++ + VL AC HGGLV GME F M + YG+ P + HY C+V LL R G KEA +I
Sbjct: 541 DKITFLGVLAACTHGGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAIEI 600
Query: 632 ITTMPFPPNALIWRTFLEGC 651
I M P++ +W L C
Sbjct: 601 INNMEIRPDSAVWGALLSAC 620
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 224/453 (49%), Gaps = 44/453 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M ++NV+S+N++I AY + G+ + A+ F M+ G++P+ T L+S +++
Sbjct: 205 MGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNLMSANAVPET---- 260
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ ++K G F DA V T+L+ LY + G D ++E P K L++ I+S + + G
Sbjct: 261 VHCYIIKCG-FTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKDLISLTGIISSYSEKG 319
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
VE + F + ++ ++ + + V+HG+S+ G HG +KNG + LVAN
Sbjct: 320 EVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLTNDCLVAN 379
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
L++ Y + I +A +F D + +++WN++I ++ A+EL+ +M++ P
Sbjct: 380 GLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSDAMELFCQMNMCGQKP 439
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T +++ C L +G+++H +++N ++ + F G+AL+D Y KC L+ A F
Sbjct: 440 DAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIF 499
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQ 359
I++ +V+WN++I GY+ F LQ G P++ TF VL +
Sbjct: 500 YSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLAAC------- 552
Query: 360 LHCLIIRMGYENY-----EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
H ++ G E + EY L + YA I G+
Sbjct: 553 THGGLVYAGMEYFRIMRKEYGLMPTLQHYA-------------------------CIVGL 587
Query: 415 YNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
R G + E +++++ +E RPD W +++AC
Sbjct: 588 LGRAGLFKEAIEIINNMEIRPDSAVWGALLSAC 620
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 140/560 (25%), Positives = 265/560 (47%), Gaps = 57/560 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNP-VEG 58
+P +VVS+N +I YS+ G+ DAL++F++M+ F P Q T LL SC ++G
Sbjct: 104 LPSADVVSWNVLICGYSQHGHPHDALQLFVHMLRESFRPNQTTIASLLPSCGRRELFLQG 163
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A +K GL D + AL +Y + L+ +F++M K++++WN+++ +G+
Sbjct: 164 RSVHAFGIKAGL-GLDPQLSNALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQ 222
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF + + F E+++ + S V +++ +S E +H +IK GF + V
Sbjct: 223 NGFEDKAVLCFKEMLKEG---WQPSPVTMMNLMSAN---AVPETVHCYIIKCGFTGDASV 276
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SLV +Y + A+ +++ +D++S II + +E A+E +++ +
Sbjct: 277 VTSLVCLYAKQGFTDMAKLLYECYPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDI 336
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ + V++ + + +G + H +KN L D V + L+ FY++ D + A
Sbjct: 337 KPDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALS 396
Query: 299 CFSEISNKNIVSWNALILG--YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + S K +++WN++I G A KSS ++ L ++ G +P+ T + +L
Sbjct: 397 LFFDRSEKPLITWNSMISGCVQAGKSS-DAMELFCQMNMCGQKPDAITIASLLSGCCQLG 455
Query: 357 LLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L+ LH I+R + ++ +L+ Y K G + A ++N P V +II+
Sbjct: 456 YLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIIS 515
Query: 413 GIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
G Y+ G ++ S+L+ PD +++ V+AAC H G +E F+ MR
Sbjct: 516 G-YSLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLAACTHGGLVYAGMEYFRIMRKE--- 571
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
+GL+ + + C ++ + G+ G +++
Sbjct: 572 -------------------------YGLMPTLQ-----HYAC--IVGLLGRAGLFKEAIE 599
Query: 529 IFNEMTDR-NVITWTALISA 547
I N M R + W AL+SA
Sbjct: 600 IINNMEIRPDSAVWGALLSA 619
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 46/273 (16%)
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA-------------FQLLQLHCLIIRMGY 369
+ +++ + +LLQ PN TFS ++++ L+ Q+ Q+ +++ G
Sbjct: 15 ASSALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLKRGI 74
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
+ + YV +L+ Y K G + A +L
Sbjct: 75 DQFLYVNTALIDFYMKLGFTTHA--------------------------------RQLFE 102
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
L D+VSWN++I + +G + L+LF +M P+ T SLL +C +
Sbjct: 103 DLPSADVVSWNVLICGYSQHGHPHDALQLFVHMLRESFRPNQTTIASLLPSCGRRELFLQ 162
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G S+H K + D + N L MY KC + +S +F EM ++NVI+W +I A G
Sbjct: 163 GRSVHAFGIKAG-LGLDPQLSNALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYG 221
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
NGF +A+ F+EM G++P V ++ +++A
Sbjct: 222 QNGFEDKAVLCFKEMLKEGWQPSPVTMMNLMSA 254
>gi|242073178|ref|XP_002446525.1| hypothetical protein SORBIDRAFT_06g017520 [Sorghum bicolor]
gi|241937708|gb|EES10853.1| hypothetical protein SORBIDRAFT_06g017520 [Sorghum bicolor]
Length = 910
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 185/670 (27%), Positives = 343/670 (51%), Gaps = 24/670 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGF----EPTQFTFGGLL-SCDSLNP 55
M + V +N +I+A SR G EDA +F M++ G PT T ++ +C
Sbjct: 137 MARPDAVCWNILITACSRRGLFEDAFVLFRSMLSCGVVEQSMPTAVTVAVIVPACAKWGH 196
Query: 56 VE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHG---CLDEVVSVFEDMPRKSLVTWNS 111
+ G + V+K GL +D G AL+ +Y + G +D+ F + K +V+WNS
Sbjct: 197 LRTGRSVHGYVVKTGLE-SDTLCGNALVSMYAKCGGSRAMDDAHRAFSSIRCKDVVSWNS 255
Query: 112 IVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN--EQDLEFGEQIHGLVIK 169
+++ + ++ ++ + LF ++ S+ +L S V I + + E G+++H V++
Sbjct: 256 VIAGYIENRLFQEALALFGQMT-SQGSLPNYSTVASILPVCSFTEFGRYHGKEVHSFVVR 314
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
+G + ++ V+N+L+ Y + + + E +F +++RD+VSWNTII + +AL L
Sbjct: 315 HGLEMDVSVSNALMTHYSKVLEVKAVESIFMSMDVRDIVSWNTIIAGYVMNGYHYRALGL 374
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYA 288
+ + + P+ +F+ ++ +CA + + G +H +++ L + + +ALV FY+
Sbjct: 375 FHELLSTGIAPDSVSFISLLTACAQVGDVKAGMGVHGYILQRPVLLQETSLMNALVTFYS 434
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF--LLIELLQLGYRPNEFTFS 346
CD + A F++I NK+ +SWNA++ A F L+ E+ + + + T
Sbjct: 435 HCDRFDDAFRAFTDILNKDSISWNAILSACAHSEQHIEKFFVLMSEMCRGVNQWDSVTVL 494
Query: 347 HVLRSSL---AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
+V+ S + + H +R+GY V +++ +Y K G DA + R
Sbjct: 495 NVIHVSTFCGIKMVREAHGWSLRVGYTGETSVANAILDAYVKCGYSHDANILFRN-HGGR 553
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
V NI+ Y + + + + + D+ SWN++I A N + LF +++
Sbjct: 554 NTVTDNIMISCYLKNNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQNHMDDQAFSLFNHLQ 613
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ + PD + ++L AC LC++ L H + + + D + L+D Y KCG+I
Sbjct: 614 SEGLKPDLVSITNILEACIHLCSVQLVRQCHAYMLRASL--EDIHLEGALVDAYSKCGNI 671
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
++ IF E++ ++++T+TA+I ++G A++A+E F +M L +PD V L +L+AC
Sbjct: 672 TNAYNIF-EVSSKDLVTFTAMIGCYAMHGMAEKAVELFSKMIKLDIRPDHVVLTTLLSAC 730
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM-PFPPNAL 642
H GLV G+++F+ + + V P +HY C+VDLL R GHL++A M P NA
Sbjct: 731 SHAGLVDAGIKIFKSIGEIHRVVPTAEHYACMVDLLARSGHLQDAYMFALDMPPHAVNAN 790
Query: 643 IWRTFLEGCQ 652
W + L C+
Sbjct: 791 AWSSLLGACK 800
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 149/607 (24%), Positives = 259/607 (42%), Gaps = 89/607 (14%)
Query: 32 MINRGFEPTQFTFGGLLSCDSLNPVEGAQL----QASVLKNGLFCADAFVGTALLGLYGR 87
M+ G P + S P G L +K+G + A V A++ YGR
Sbjct: 63 MLAEGLRPGALELAAAIRSASALPGGGGALARCLHGLAVKSGRVASSATVAKAVMDAYGR 122
Query: 88 H-GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF-----CELVRSEVALTE 141
G L + + VF++M R V WN +++ + G ED LF C +V + T
Sbjct: 123 RLGSLADALLVFDEMARPDAVCWNILITACSRRGLFEDAFVLFRSMLSCGVVEQSMP-TA 181
Query: 142 SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG---IWSAEKM 198
+ ++ + L G +HG V+K G + + L N+LV+MY +C G + A +
Sbjct: 182 VTVAVIVPACAKWGHLRTGRSVHGYVVKTGLESDTLCGNALVSMYAKCGGSRAMDDAHRA 241
Query: 199 FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ-N 257
F + +DVVSWN++I E+ F +AL L+ +M+ PN +T ++ C+ +
Sbjct: 242 FSSIRCKDVVSWNSVIAGYIENRLFQEALALFGQMTSQGSLPNYSTVASILPVCSFTEFG 301
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
GK +H+ V+++ LE DV V +AL+ Y+K ++ F + ++IVSWN +I G
Sbjct: 302 RYHGKEVHSFVVRHGLEMDVSVSNALMTHYSKVLEVKAVESIFMSMDVRDIVSWNTIIAG 361
Query: 318 YASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
Y ++ L ELL G P+ +F
Sbjct: 362 YVMNGYHYRALGLFHELLSTGIAPDSVSFI------------------------------ 391
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPA-----NIIAGIYNRTGQYNETVKLLSQL 431
SL+T+ A+ G + + V + R V+ N + Y+ ++++ + + +
Sbjct: 392 -SLLTACAQVGDVKAGMG-VHGYILQRPVLLQETSLMNALVTFYSHCDRFDDAFRAFTDI 449
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA--CSKLCNLAL 489
D +SWN +++ACAH+ + E + F M + + V++L+ S C + +
Sbjct: 450 LNKDSISWNAILSACAHSEQHIE--KFFVLMSEMCRGVNQWDSVTVLNVIHVSTFCGIKM 507
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG---------------------------- 521
HG + + +T V N ++D Y KCG
Sbjct: 508 VREAHGWSLRVG-YTGETSVANAILDAYVKCGYSHDANILFRNHGGRNTVTDNIMISCYL 566
Query: 522 ---SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
I + IFN M ++++ +W +I N +A F ++ G KPD V++
Sbjct: 567 KNNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQNHMDDQAFSLFNHLQSEGLKPDLVSITN 626
Query: 579 VLTACRH 585
+L AC H
Sbjct: 627 ILEACIH 633
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 120/510 (23%), Positives = 229/510 (44%), Gaps = 51/510 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M R++VS+N+II+ Y GY AL +F +++ G P +F LL+ C + V+ G
Sbjct: 347 MDVRDIVSWNTIIAGYVMNGYHYRALGLFHELLSTGIAPDSVSFISLLTACAQVGDVKAG 406
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG- 117
+ +L+ + + + AL+ Y D+ F D+ K ++WN+I+S
Sbjct: 407 MGVHGYILQRPVLLQETSLMNALVTFYSHCDRFDDAFRAFTDILNKDSISWNAILSACAH 466
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+E L E+ R + + VIH +S ++ + HG ++ G+ E
Sbjct: 467 SEQHIEKFFVLMSEMCRGVNQWDSVTVLNVIH-VSTFCGIKMVREAHGWSLRVGYTGETS 525
Query: 178 VANSLVNMYFQCA-------------------------------GIWSAEKMFKDVEIRD 206
VAN++++ Y +C I AE +F + +D
Sbjct: 526 VANAILDAYVKCGYSHDANILFRNHGGRNTVTDNIMISCYLKNNCIEDAEVIFNHMAEKD 585
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
+ SWN +I A++ +A L+ + + + P+ + ++ +C L + L + HA
Sbjct: 586 LTSWNLMIQLYAQNHMDDQAFSLFNHLQSEGLKPDLVSITNILEACIHLCSVQLVRQCHA 645
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPT 325
+++ +LE D+ + ALVD Y+KC N+ A+ F E+S+K++V++ A+I YA +
Sbjct: 646 YMLRASLE-DIHLEGALVDAYSKCGNITNAYNIF-EVSSKDLVTFTAMIGCYAMHGMAEK 703
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV-----LGSLM 380
++ L ++++L RP+ + +L + L+ I + E + V ++
Sbjct: 704 AVELFSKMIKLDIRPDHVVLTTLLSACSHAGLVDAGIKIFKSIGEIHRVVPTAEHYACMV 763
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE------TVKLLSQLERP 434
A+SG + DA F AL++P V AN + + + E L +E
Sbjct: 764 DLLARSGHLQDAYMF--ALDMPPHAVNANAWSSLLGACKVHGEIKIGQLAADQLFSMEEG 821
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
DI ++ I+ A + + V + K M++
Sbjct: 822 DIGNYVIMSNIYAADEKWDGVEHVRKLMKS 851
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 33/266 (12%)
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
A V ++ R G + + + ++ RPD V WNI+I AC+ G +++ LF+ M
Sbjct: 110 ATVAKAVMDAYGRRLGSLADALLVFDEMARPDAVCWNILITACSRRGLFEDAFVLFRSML 169
Query: 464 AARI----YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
+ + P T ++ AC+K +L G S+HG + KT + SDT N L+ MY K
Sbjct: 170 SCGVVEQSMPTAVTVAVIVPACAKWGHLRTGRSVHGYVVKTG-LESDTLCGNALVSMYAK 228
Query: 520 CG---SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
CG ++ + + F+ + ++V++W ++I+ N Q AL F +M G P+ +
Sbjct: 229 CGGSRAMDDAHRAFSSIRCKDVVSWNSVIAGYIENRLFQEALALFGQMTSQGSLPNYSTV 288
Query: 577 IAVLTACR------------HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
++L C H +VR G+E+ ++ + M HY V++
Sbjct: 289 ASILPVCSFTEFGRYHGKEVHSFVVRHGLEMDVSVSNAL-----MTHYSKVLE------- 336
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEG 650
+K E I +M + + W T + G
Sbjct: 337 VKAVESIFMSMDV-RDIVSWNTIIAG 361
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 488 ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK-CGSIGSSVKIFNEMTDRNVITWTALIS 546
AL LHGL K+ ++S V ++D YG+ GS+ ++ +F+EM + + W LI+
Sbjct: 91 ALARCLHGLAVKSGRVASSATVAKAVMDAYGRRLGSLADALLVFDEMARPDAVCWNILIT 150
Query: 547 ALGLNGFAQRALEKFREMEFLGF----KPDRVALIAVLTACRHGGLVREG 592
A G + A FR M G P V + ++ AC G +R G
Sbjct: 151 ACSRRGLFEDAFVLFRSMLSCGVVEQSMPTAVTVAVIVPACAKWGHLRTG 200
>gi|302822394|ref|XP_002992855.1| hypothetical protein SELMODRAFT_136091 [Selaginella moellendorffii]
gi|300139303|gb|EFJ06046.1| hypothetical protein SELMODRAFT_136091 [Selaginella moellendorffii]
Length = 758
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 184/676 (27%), Positives = 333/676 (49%), Gaps = 44/676 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+ ++NVVS+ S+I AY+ G +A++++ M P ++T + +C++L E
Sbjct: 71 LREKNVVSWTSMIRAYALSGQNREAVKLYKAM---DVTPNEYTLASIAEACENLE--EAR 125
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+++ + G A V A++G++ + G LD+ K++ WN +++ G+
Sbjct: 126 EIETRAVDGGFGSVRA-VALAIVGMFCKLGSLDDARRYLIRHDAKNVFCWNQLIAAQGRS 184
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
M L+ E+ R+ E V + L D + G ++H V+++GF+ + +V+
Sbjct: 185 SSSSTAMDLYREMRRNHG--VEPDCVTYLELLKVCSDWKLGRELHASVLEHGFEQDEVVS 242
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
++LV M+ +CA +A K+F +E ++VVSW T+I A A+S+ +A+EL+ M ++ V
Sbjct: 243 SALVTMHGRCAMPDAARKIFASIERKNVVSWTTMIAAYAQSDRSDEAMELFHAMDLEGVR 302
Query: 240 PNQTTFVYVINSCAGLQNS-------ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
P++ TFV V+++ A +S +S+ + +++ L D +G+A+VD Y K
Sbjct: 303 PSEQTFVSVVHALASSSSSRDELAALAAARSLEERALRSGLGIDGVLGNAMVDLYGKRRR 362
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
+ A F + +++ V+W A+I YA F L +++ P TF VL +
Sbjct: 363 PDEARGVFDAMRSRSAVAWTAMIQAYAQSGRREEAFALFREMEI--EPAATTFVSVLEAC 420
Query: 353 LAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
L ++H ++ G E+ +V +L+ + K G A + + + +VP
Sbjct: 421 AGSSDLDAGREVHSAVVSRGLESDVFVGTALIDMFGKCGDCDAARSSFERI-ADKTIVPW 479
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N + +Y + G+ + ++LL+ NG V + +
Sbjct: 480 NAMLAVYVQNGRPRDALELLNH--------------GGTVNGRGGTVKLVNATGGTGGVT 525
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD TFV LL+AC L +A+G +LH E++ + + N L+ MY CGS+ +
Sbjct: 526 PDKITFVLLLNACGALGEIAVGRALHRDAIPGELLGESSCIGNALVAMYASCGSLEEARV 585
Query: 529 IFNEMTDRNVITWTAL---ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
F + +++ +W A+ ++ALG + ++E F EME GF D +L +L+ C H
Sbjct: 586 AFRGIQRKSLASWNAMAGAVAALGGSRSWSASMELFSEMELQGFNADEASLAGILSGCSH 645
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GL +G +F M +GV HY C+VD+L R G L EAE ++ +MP+ P + W
Sbjct: 646 AGLKHQGWRIFVSMTDDFGVPCSAVHYVCIVDMLGRLGQLDEAESLLGSMPYQPGLVGWM 705
Query: 646 TFLEGCQR----CRIA 657
T L C + CR A
Sbjct: 706 TLLGACGKHGDVCRGA 721
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 150/571 (26%), Positives = 251/571 (43%), Gaps = 60/571 (10%)
Query: 36 GFEPTQFTFGGLLSCDS-LNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEV 94
G +P++ TF ++S S L ++ A + + F A VGTAL+G+YGR E
Sbjct: 5 GVKPSEVTFVSVISSVSELGSIDLAVYVRARVDACGFGAHLVVGTALIGMYGRCKRPGEA 64
Query: 95 VSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE 154
+F+ + K++V+W S++ + G + + L+ + +V E + + N
Sbjct: 65 REIFDSLREKNVVSWTSMIRAYALSGQNREAVKLYKAM---DVTPNEYTLASIAEACEN- 120
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
LE +I + GF VA ++V M+ + + A + + ++V WN +I
Sbjct: 121 --LEEAREIETRAVDGGFGSVRAVALAIVGMFCKLGSLDDARRYLIRHDAKNVFCWNQLI 178
Query: 215 GALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
A S + A++LY M + V P+ T++ ++ C+ + LG+ +HA V+++
Sbjct: 179 AAQGRSSSSSTAMDLYREMRRNHGVEPDCVTYLELLKVCSDWK---LGRELHASVLEHGF 235
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL 333
E D V SALV + +C + A F+ I KN+VSW +I YA L
Sbjct: 236 EQDEVVSSALVTMHGRCAMPDAARKIFASIERKNVVSWTTMIAAYAQSDRSDEAMELFHA 295
Query: 334 LQL-GYRPNEFTF---SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
+ L G RP+E TF H L SS + + R SL +SGL
Sbjct: 296 MDLEGVRPSEQTFVSVVHALASSSSSRDELAALAAAR-----------SLEERALRSGLG 344
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
D V N + +Y + + +E + + V+W +I A A +
Sbjct: 345 IDG-------------VLGNAMVDLYGKRRRPDEARGVFDAMRSRSAVAWTAMIQAYAQS 391
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
G +E LF+ M I P TFVS+L AC+ +L G +H + + + SD FV
Sbjct: 392 GRREEAFALFREM---EIEPAATTFVSVLEACAGSSDLDAGREVHSAV-VSRGLESDVFV 447
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL-- 567
LIDM+GKCG ++ F + D+ ++ W A+++ NG + ALE +
Sbjct: 448 GTALIDMFGKCGDCDAARSSFERIADKTIVPWNAMLAVYVQNGRPRDALELLNHGGTVNG 507
Query: 568 ---------------GFKPDRVALIAVLTAC 583
G PD++ + +L AC
Sbjct: 508 RGGTVKLVNATGGTGGVTPDKITFVLLLNAC 538
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 134/520 (25%), Positives = 229/520 (44%), Gaps = 55/520 (10%)
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
V +E +FV VI +S ++ + V GF L+V +L+ MY +C A
Sbjct: 6 VKPSEVTFVSVISSVSELGSIDLAVYVRARVDACGFGAHLVVGTALIGMYGRCKRPGEAR 65
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
++F + ++VVSW ++I A A S +A++LY M V PN+ T + +C L+
Sbjct: 66 EIFDSLREKNVVSWTSMIRAYALSGQNREAVKLYKAMDVT---PNEYTLASIAEACENLE 122
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ + I + + V A+V + K +L+ A KN+ WN LI
Sbjct: 123 EA---REIETRAVDGGFGSVRAVALAIVGMFCKLGSLDDARRYLIRHDAKNVFCWNQLIA 179
Query: 317 GYA-SKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQL-LQLHCLIIRMGYENYE 373
S SS T++ L E+ + G P+ T+ +L+ ++L +LH ++ G+E E
Sbjct: 180 AQGRSSSSSTAMDLYREMRRNHGVEPDCVTYLELLKVCSDWKLGRELHASVLEHGFEQDE 239
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
V +L+T ++ R + K+ + +ER
Sbjct: 240 VVSSALVT--------------------------------MHGRCAMPDAARKIFASIER 267
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS----LLSACSKLCNLAL 489
++VSW +IAA A + E +ELF M + P TFVS L S+ S LA
Sbjct: 268 KNVVSWTTMIAAYAQSDRSDEAMELFHAMDLEGVRPSEQTFVSVVHALASSSSSRDELAA 327
Query: 490 GSSLHGLIKKT--EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISA 547
++ L ++ + D + N ++D+YGK + +F+ M R+ + WTA+I A
Sbjct: 328 LAAARSLEERALRSGLGIDGVLGNAMVDLYGKRRRPDEARGVFDAMRSRSAVAWTAMIQA 387
Query: 548 LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
+G + A FREME +P ++VL AC + G E+ + S G+E
Sbjct: 388 YAQSGRREEAFALFREME---IEPAATTFVSVLEACAGSSDLDAGREVHSAVV-SRGLES 443
Query: 608 EMDHYHCVVDLLVRYGHLKEA----EKIITTMPFPPNALI 643
++ ++D+ + G A E+I P NA++
Sbjct: 444 DVFVGTALIDMFGKCGDCDAARSSFERIADKTIVPWNAML 483
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 184/457 (40%), Gaps = 75/457 (16%)
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M ++ V P++ TFV VI+S + L + L + A+V + VG+AL+ Y +C
Sbjct: 1 MDLEGVKPSEVTFVSVISSVSELGSIDLAVYVRARVDACGFGAHLVVGTALIGMYGRCKR 60
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A F + KN+VSW ++I YA L + + + PNE+T + + +
Sbjct: 61 PGEAREIFDSLREKNVVSWTSMIRAYALSGQNREAVKLYKAMDV--TPNEYTLASIAEAC 118
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
EN E + T G S RAV A I
Sbjct: 119 -----------------ENLEEAR-EIETRAVDGGFGS-----------VRAVALA--IV 147
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR-IYPDN 471
G++ + G ++ + L + + ++ WN +IAA + ++L++ MR + PD
Sbjct: 148 GMFCKLGSLDDARRYLIRHDAKNVFCWNQLIAAQGRSSSSSTAMDLYREMRRNHGVEPDC 207
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
T++ LL CS + LG LH + + D V + L+ M+G+C ++ KIF
Sbjct: 208 VTYLELLKVCS---DWKLGRELHASVLE-HGFEQDEVVSSALVTMHGRCAMPDAARKIFA 263
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ +NV++WT +I+A + + A+E F M+ G +P ++V+ A R+
Sbjct: 264 SIERKNVVSWTTMIAAYAQSDRSDEAMELFHAMDLEGVRPSEQTFVSVVHALASSSSSRD 323
Query: 592 -------GMELFERMNRS---------------YGVEPEMDHYHCVVDLL---------- 619
L ER RS YG D V D +
Sbjct: 324 ELAALAAARSLEERALRSGLGIDGVLGNAMVDLYGKRRRPDEARGVFDAMRSRSAVAWTA 383
Query: 620 -----VRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ G +EA + M P A + + LE C
Sbjct: 384 MIQAYAQSGRREEAFALFREMEIEPAATTFVSVLEAC 420
>gi|302788478|ref|XP_002976008.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
gi|300156284|gb|EFJ22913.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
Length = 495
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 163/478 (34%), Positives = 250/478 (52%), Gaps = 32/478 (6%)
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V NSL+NMY +C G+ A + F+ + R+V+SW+T++ A A+ + +AL L+ +M +
Sbjct: 11 FVGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEE 70
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN+ TF+ V+++CA + G+ IH V + L+ + VG+ALV Y KC L A
Sbjct: 71 GVEPNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIEA 130
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF 355
F I K++V+W+ +I YA L + L G RPNE
Sbjct: 131 RQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNE------------- 177
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGI 414
II M +LG+ ++ A G ++ L + V N + +
Sbjct: 178 --------IILMS------ILGACSSAGALAEGKMTHELVVICGFGAD--VSTGNTLIKM 221
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y + G + +ER D++SW+ ++A A +G K+ F+ M + PD TF
Sbjct: 222 YGKCGDLASAKAVFGGMERRDLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTF 281
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
VSLL ACS L L G +H I+ E S ++ N LIDMYGKCGS+ ++ +IF+ M+
Sbjct: 282 VSLLDACSLLGALVEGHVIHTRIR-AEGFQSVMYIENSLIDMYGKCGSLQAAREIFDRMS 340
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
RNVITWT +I+A + + ALE F EME G +PD+VA ++++ +C H GLV EG
Sbjct: 341 HRNVITWTTMITACVQHEQGKEALELFEEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRI 400
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F +M P ++H+ ++DLL R G L EAE+++ MP P + W T L C+
Sbjct: 401 YFLKMVEDQSFTPGVEHFVGMLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLSACK 458
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 245/498 (49%), Gaps = 43/498 (8%)
Query: 68 NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMF 127
GL C + FVG +LL +YG+ G ++E FE M +++++W+++V+ + + G + +
Sbjct: 4 TGLCCGE-FVGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALV 62
Query: 128 LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYF 187
LF ++ V E +F+ V+ +N + +E GE IH LV + D L+V +LV MY
Sbjct: 63 LFQKMEEEGVEPNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVGLIVGTALVGMYG 122
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVY 247
+C+ + A ++F + +DVV+W+T+I A A+ + +A++L+ M++D V PN+ +
Sbjct: 123 KCSRLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMS 182
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
++ +C+ GK H V+ DV G+ L+ Y KC +L A F + ++
Sbjct: 183 ILGACSSAGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRD 242
Query: 308 IVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS-SLAFQLLQLHCLII 365
++SW+A++ A F+ + L G +P+ TF +L + SL L++ H +
Sbjct: 243 LISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGHVIHT 302
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
R+ E ++ V+ Y ++ LI +Y + G
Sbjct: 303 RIRAEGFQSVM------YIENSLID-----------------------MYGKCGSLQAAR 333
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
++ ++ ++++W +I AC + KE LELF+ M A + PD F+S++ +CS
Sbjct: 334 EIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEMEKAGVQPDQVAFLSIIHSCSH-- 391
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNM-----LIDMYGKCGSIGSSVKIFNEM-TDRNVI 539
G G I +++ +F + ++D+ G+ G + + ++ M + V+
Sbjct: 392 ---SGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDLLGRSGKLNEAEELMEFMPVEPGVV 448
Query: 540 TWTALISALGLNGFAQRA 557
W L+SA + +RA
Sbjct: 449 GWNTLLSACKTHNDTERA 466
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 229/458 (50%), Gaps = 38/458 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M RNV+S++++++AY++ G + AL +F M G EP + TF +L +C + VE
Sbjct: 36 MTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEGVEPNEVTFLSVLDACANAEAVEQG 95
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ ++ VGTAL+G+YG+ L E VF+ + K +VTW++++S + +
Sbjct: 96 EMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIEARQVFDGIVEKDVVTWSTMISAYAQL 155
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G V + + LF + V E + ++ S+ L G+ H LV+ GF ++
Sbjct: 156 GHVREAIQLFGYMNLDGVRPNEIILMSILGACSSAGALAEGKMTHELVVICGFGADVSTG 215
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L+ MY +C + SA+ +F +E RD++SW+ ++ +AE + A + RM ++ V
Sbjct: 216 NTLIKMYGKCGDLASAKAVFGGMERRDLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVK 275
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ TFV ++++C+ L + G IH ++ + +++ ++L+D Y KC +L+ A
Sbjct: 276 PDYVTFVSLLDACSLLGALVEGHVIHTRIRAEGFQSVMYIENSLIDMYGKCGSLQAAREI 335
Query: 300 FSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F +S++N+++W +I + ++ L E+ + G +P++ F
Sbjct: 336 FDRMSHRNVITWTTMITACVQHEQGKEALELFEEMEKAGVQPDQVAFL------------ 383
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA-NIIAGIYN- 416
S++ S + SGL+ + + + ++ P G+ +
Sbjct: 384 -------------------SIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDL 424
Query: 417 --RTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
R+G+ NE +L+ + P +V WN +++AC + D
Sbjct: 425 LGRSGKLNEAEELMEFMPVEPGVVGWNTLLSACKTHND 462
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 180/599 (30%), Positives = 292/599 (48%), Gaps = 43/599 (7%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q + NGL D + T L+ LYG G + VF+ +P W I+ + +
Sbjct: 74 QAHGVLTGNGLM-GDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLN 132
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + + L++ + F + + QDL+ G++IH ++K ++ +V
Sbjct: 133 NESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVP-SFDNVVL 191
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
L++MY +C I S+ K+F+D+ +R+VV W ++I +++ + + L L+ RM + V
Sbjct: 192 TGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVL 251
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
N+ T+ ++ +C L+ GK H +IK+ +E + ++L+D Y KC ++ A
Sbjct: 252 GNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRV 311
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLL 358
F+E S+ ++V W A+I+GY S L + + +G +PN T + VL L
Sbjct: 312 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNL 371
Query: 359 QL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+L H L I++G + N+ A+V ++ A
Sbjct: 372 ELGRSIHGLSIKVG---------------------------IWDTNVANALV--HMYAKC 402
Query: 415 Y-NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
Y NR +Y + DIV+WN +I+ + NG E L LF M + P+ T
Sbjct: 403 YQNRDAKY-----VFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVT 457
Query: 474 FVSLLSACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
SL SAC+ L +LA+GSSLH +K + SS V L+D Y KCG S+ IF+
Sbjct: 458 VASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDT 517
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ ++N ITW+A+I G G + +LE F EM KP+ +VL+AC H G+V EG
Sbjct: 518 IEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEG 577
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ F M + Y P HY C+VD+L R G L++A II MP P+ + FL GC
Sbjct: 578 KKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGC 636
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 137/536 (25%), Positives = 237/536 (44%), Gaps = 32/536 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
+P+ + + I+ Y + ++ + ++ GF F L +C + ++ G
Sbjct: 114 IPEPDFYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNG 173
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ ++K F D V T LL +Y + G + VFED+ +++V W S+++ + K
Sbjct: 174 KKIHCQIVKVPSF--DNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVK 231
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ E+ + LF + + V E ++ ++ + + L G+ HG +IK+G + +
Sbjct: 232 NDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCL 291
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SL++MY +C I +A ++F + D+V W +I + + +AL L+ +MS +
Sbjct: 292 VTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGI 351
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T V++ C + N LG+SIH IK + D V +ALV YAKC A
Sbjct: 352 KPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKY 410
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F S K+IV+WN++I G++ S ++FL + PN T +SL
Sbjct: 411 VFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTV-----ASLFSAC 465
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
L L I Y LG L +S G TAL Y +
Sbjct: 466 ASLGSLAIGSSLHAYSVKLGFLASSSVHVG---------TAL------------LDFYAK 504
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G + +E + ++W+ +I GD K LELF+ M + P+ TF S+
Sbjct: 505 CGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSV 564
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
LSACS + G + K + T ++DM + G + ++ I +M
Sbjct: 565 LSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKM 620
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 212/506 (41%), Gaps = 42/506 (8%)
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
LS +++ Q HG++ NG ++ +A LV++Y A +F + D W
Sbjct: 63 LSKCTNIDSLRQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLW 122
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
I+ + + ++ Y + + F + +C +Q+ GK IH +++K
Sbjct: 123 KVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVK 182
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFL 329
D V + L+D YAKC ++ ++ F +I+ +N+V W ++I GY + L
Sbjct: 183 -VPSFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVL 241
Query: 330 LIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAK 385
+ + NE+T+ ++ + + L H +I+ G E ++ SL+ Y K
Sbjct: 242 FNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVK 301
Query: 386 SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA 445
G IS+A ++ ++ D+V W +I
Sbjct: 302 CGDISNAR--------------------------------RVFNEHSHVDLVMWTAMIVG 329
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
HNG E L LF+ M I P+ T S+LS C + NL LG S+HGL K I
Sbjct: 330 YTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIW-- 387
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
DT V N L+ MY KC + +F ++++++ W ++IS NG AL F M
Sbjct: 388 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 447
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFE-RMNRSYGVEPEMDHYHCVVDLLVRYGH 624
P+ V + ++ +AC G + G L + + + ++D + G
Sbjct: 448 TESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 507
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEG 650
+ A I T+ N + W + G
Sbjct: 508 AESARLIFDTIE-EKNTITWSAMIGG 532
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 166/557 (29%), Positives = 286/557 (51%), Gaps = 30/557 (5%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+FE M ++ V+W ++ + ++ ++ L+ E+ RS V +F ++ G +
Sbjct: 99 LFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTT 158
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L+ QIH +I+ GF L+V NSLV+ Y + + A ++F ++ +D VS+N +I
Sbjct: 159 LKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITG 218
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ +AL+L+++M P+ TF ++ G ++ I G+ IH IK + D
Sbjct: 219 YTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWD 278
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ- 335
+FV +AL+DFY+K D ++ A F E+ + VS+N +I GYA F L + LQ
Sbjct: 279 IFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQG 338
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
+ F F+ +L S+A L L MG + + + + S + G
Sbjct: 339 TSFDRKNFPFATML--SVAAIELNLS-----MGRQTHAQAVVTTAVSEVQVG-------- 383
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
N + +Y + ++ + ++ + L + V W +I+ G ++E
Sbjct: 384 -------------NALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEA 430
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
L++FK M ++ D TF S L A + L +++LG LH + + ++SS F ++L+D
Sbjct: 431 LKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSS-VFSGSVLVD 489
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY CGS+ ++++F EM DRN++ W ALISA NG A+ F +M G PD V+
Sbjct: 490 MYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVS 549
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
++VLTAC H GLV + + F M + Y ++P HY ++D+L R G EAE +I+ M
Sbjct: 550 FLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEM 609
Query: 636 PFPPNALIWRTFLEGCQ 652
PF P+ ++W + L C+
Sbjct: 610 PFEPDEVMWSSVLNSCR 626
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 155/596 (26%), Positives = 275/596 (46%), Gaps = 84/596 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
M RN VS+ +I YS+ ++A ++ M G +P TF LLS D+ E
Sbjct: 103 MFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEV 162
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + +++ G F A V +L+ Y + CLD +F +MP K V++N +++ + K
Sbjct: 163 LQIHSHIIRFG-FSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTK 221
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF E+ + LF ++ + + +F ++ +D+ FG+QIHGL IK + +++ V
Sbjct: 222 YGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFV 281
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN+L++ Y + I A+ +F ++ D VS+N II A + + K+ +L+ R+
Sbjct: 282 ANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSF 341
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
F +++ A N +G+ HA+ + +V VG+ALVD YAKC+ E A+
Sbjct: 342 DRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANR 401
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+ ++ +N V W A+I Y K ++ + E+ + ++ TF+ L++S
Sbjct: 402 IFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLAS 461
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ QLH +IR+G L++S V +++
Sbjct: 462 VSLGKQLHSSVIRLG----------LLSS----------------------VFSGSVLVD 489
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y G + +++ ++ +IV WN +I+A + NGD + F M + +YPD+ +
Sbjct: 490 MYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVS 549
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F+S+L+ACS GL++K ++ FN M
Sbjct: 550 FLSVLTACSH----------RGLVEK--------------------------ALWYFNSM 573
Query: 534 T-----DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
T D + +I L +G A EM F+PD V +VL +CR
Sbjct: 574 TQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMP---FEPDEVMWSSVLNSCR 626
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 218/479 (45%), Gaps = 46/479 (9%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N +V+ Y + ++ A ++F+ + R+ VSW +IG +++ +A LY M V
Sbjct: 81 NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK 140
Query: 240 PNQTTFVYVINSCAGLQNSILGK---SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
P+ TF ++ +G ++ K IH+ +I+ + V ++LVD Y K L+ A
Sbjct: 141 PDHITFATLL---SGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIA 197
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
FSE+ K+ VS+N +I GY ++ L +++ + ++P+ FTF+ +L S+
Sbjct: 198 SQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGS 257
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ + Q+H L I+ Y +V +L+ Y+K I A
Sbjct: 258 EDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLA------------------- 298
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
L ++ D VS+NI+I A NG Y++ +LFK ++ N
Sbjct: 299 -------------KNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKN 345
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ F ++LS + NL++G H T + S+ V N L+DMY KC + +IF
Sbjct: 346 FPFATMLSVAAIELNLSMGRQTHAQAVVTTAV-SEVQVGNALVDMYAKCEKFEDANRIFA 404
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ RN + WTA+IS GF + AL+ F+EM D+ + L A + V
Sbjct: 405 NLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSL 464
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G +L + R G+ + +VD+ G +K+A ++ MP N + W +
Sbjct: 465 GKQLHSSVIR-LGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMP-DRNIVCWNALISA 521
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 132/295 (44%), Gaps = 36/295 (12%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVE-GAQL 61
RN V + +IIS Y + G+ E+AL+MF M Q TF L + L V G QL
Sbjct: 409 RNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQL 468
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+SV++ GL + F G+ L+ +Y G + + + VF++MP +++V WN+++S + ++G
Sbjct: 469 HSSVIRLGLLSS-VFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGD 527
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E F +++ S + SF+ V+ S+ GLV K L NS
Sbjct: 528 AEATFSSFADMIESGLYPDSVSFLSVLTACSH----------RGLVEK-----ALWYFNS 572
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
+ +Y ++ R + T+I L S F +A L M + P+
Sbjct: 573 MTQVY--------------KLDPRRK-HYATMIDVLCRSGRFNEAENLISEMPFE---PD 614
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ + V+NSC +N L K ++ K D + + YA+ E A
Sbjct: 615 EVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENA 669
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
E+ +T NM++ Y K ++ + ++F M RN ++WT +I N + A
Sbjct: 71 EMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNL 130
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
+ EM G KPD + +L+ ++E +++ + R +G + ++ +VD
Sbjct: 131 YTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIR-FGFSASLIVFNSLVDSYC 189
Query: 621 RYGHLKEAEKIITTMP 636
+ L A ++ + MP
Sbjct: 190 KTCCLDIASQLFSEMP 205
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 192/672 (28%), Positives = 322/672 (47%), Gaps = 57/672 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLN-PVEG 58
M R+ +S+NS+I G+ A+ +F M ++G E + T +L +C L + G
Sbjct: 265 MHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIG 324
Query: 59 AQLQASVLKNGLFCA---------DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV-T 108
+ +K+GL DA +G+ L+ +Y + G + VF+ M K V
Sbjct: 325 KAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHV 384
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTE---SSFVGVIHGLSNEQDLEFGEQIHG 165
WN I+ + K G E+ + LF ++ +A E S + I LS +D G HG
Sbjct: 385 WNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARD---GLVAHG 441
Query: 166 LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
++K GF + V N+L++ Y + I A +F + +D +SWN++I + + +
Sbjct: 442 YIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSE 501
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
A+EL++RM + T + V+ +CA + G+ +H +K L + + +AL+D
Sbjct: 502 AIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLD 561
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFT 344
Y+ C + + + F + KN+VSW A+I Y + LL E++ G RP+ F
Sbjct: 562 MYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFA 621
Query: 345 FSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
+ L + + L+ +H IR G E V +LM Y K
Sbjct: 622 VTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKC-------------- 667
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
R V A +I ++ D++SWN +I + N E LF
Sbjct: 668 --RNVEEARLI----------------FDRVTNKDVISWNTLIGGYSRNNFPNESFSLFS 709
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M + P+ T +L A + + +L G +H + + D++ N L+DMY KC
Sbjct: 710 DM-LLQFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLE-DSYASNALVDMYVKC 767
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
G++ + +F+ +T +N+I+WT +I+ G++GF + A+ F +M G +PD + A+L
Sbjct: 768 GALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAIL 827
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
AC H GL EG F+ M + Y +EP++ HY C+VDLL R G LKEA + I +MP P+
Sbjct: 828 YACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPD 887
Query: 641 ALIWRTFLEGCQ 652
+ IW + L GC+
Sbjct: 888 SSIWVSLLHGCR 899
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/597 (27%), Positives = 292/597 (48%), Gaps = 53/597 (8%)
Query: 75 AFVGTALLGLYGRHGCLDEVVSVFEDMPRKS--LVTWNSIVSIFGKHGFVEDCMFLFCEL 132
+ +G L+ Y + G L E +VF+ MP ++ + W S++S + K G ++ + LF ++
Sbjct: 136 SVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQM 195
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
V+ + V+ +S+ L GE IHGL+ K G VAN+L+ +Y +C +
Sbjct: 196 QCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRM 255
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
A ++F + RD +SWN++IG + G A++L+ +M + T + V+ +C
Sbjct: 256 EDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPAC 315
Query: 253 AGLQNSILGKSIHAKVIKNALEC----------DVFVGSALVDFYAKCDNLEGAHLCFSE 302
AGL ++GK++H +K+ L D +GS LV Y KC ++ A F
Sbjct: 316 AGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDA 375
Query: 303 ISNK-NIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRS----SLAFQ 356
+S+K N+ WN ++ GYA S+ L +++ +LG P+E S +L+ S A
Sbjct: 376 MSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARD 435
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L H I+++G+ V +L++ YAKS +I DA+ ++N
Sbjct: 436 GLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVL-------------------VFN 476
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
R + R D +SWN VI+ C+ NG E +ELF M D+ T +S
Sbjct: 477 R-------------MPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLS 523
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+L AC++ G +HG KT +I +T + N L+DMY C S+ +IF M +
Sbjct: 524 VLPACAQSRYWFAGRVVHGYSVKTGLI-GETSLANALLDMYSNCSDWQSTNQIFRSMGQK 582
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
NV++WTA+I++ G + +EM G +PD A+ + L A +++G +
Sbjct: 583 NVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVH 642
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
R+ G+E + + ++++ V+ +++EA ++I + + W T + G R
Sbjct: 643 GYTIRN-GMEKLLPVANALMEMYVKCRNVEEA-RLIFDRVTNKDVISWNTLIGGYSR 697
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 163/669 (24%), Positives = 304/669 (45%), Gaps = 55/669 (8%)
Query: 1 MPDR--NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPV- 56
MP + +V + S++SAY++ G ++A+ +F M G P +L C SL +
Sbjct: 162 MPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLT 221
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
EG + + K GL A A V AL+ +Y R G +++ VF+ M + ++WNS++
Sbjct: 222 EGEVIHGLLEKLGLGQACA-VANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGC 280
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+G+ + LF ++ ++ + + V+ + G+ +HG +K+G + L
Sbjct: 281 FSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGL 340
Query: 177 ----------LVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGK 225
+ + LV MY +C + SA ++F + + +V WN I+G A+ F +
Sbjct: 341 DSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEE 400
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
+L L+++M + P++ ++ L + G H ++K V +AL+
Sbjct: 401 SLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALIS 460
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFT 344
FYAK + + A L F+ + ++ +SWN++I G +S + +I L I + G + T
Sbjct: 461 FYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVT 520
Query: 345 FSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPR 403
VL + ++ + G ++ Y+ K+GLI + T+L
Sbjct: 521 LLSVLPACA----------------QSRYWFAGRVVHGYSVKTGLIGE-----TSL---- 555
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
AN + +Y+ + T ++ + + ++VSW +I + G + +V L + M
Sbjct: 556 ----ANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMV 611
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
I PD + S L A + +L G S+HG + + V N L++MY KC ++
Sbjct: 612 LDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGM-EKLLPVANALMEMYVKCRNV 670
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ IF+ +T+++VI+W LI N F + F +M L F+P+ V + +L A
Sbjct: 671 EEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDM-LLQFRPNAVTMTCILPAA 729
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
+ G E+ R +E D Y + +VD+ V+ G L A + + N
Sbjct: 730 ASISSLERGREIHAYALRRGFLE---DSYASNALVDMYVKCGALLVARVLFDRLT-KKNL 785
Query: 642 LIWRTFLEG 650
+ W + G
Sbjct: 786 ISWTIMIAG 794
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 209/463 (45%), Gaps = 31/463 (6%)
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLV-----IKNGFDYELLVANSLVNM 185
L+ S+ + S+ V+ E+ LE ++ H L+ G +L LV
Sbjct: 87 RLLGSDGGVDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVL-GKRLVLA 145
Query: 186 YFQCAGIWSAEKMFKDV--EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
Y +C + A +F + + DV W +++ A A++ +F +A+ L+ +M V P+
Sbjct: 146 YLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAH 205
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
V+ + L + G+ IH + K L V +AL+ Y++C +E A F +
Sbjct: 206 AVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSM 265
Query: 304 SNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHC 362
++ +SWN++I G +++ T++ L ++ G + T VL +
Sbjct: 266 HPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAG-------- 317
Query: 363 LIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
+GY ++G + Y+ KSGL+ L V + I A + + ++ +Y + G
Sbjct: 318 ----LGYG----LIGKAVHGYSVKSGLLW-GLDSVQS-GIDDAALGSKLVF-MYVKCGDM 366
Query: 422 NETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
++ + + ++ WN+++ A G+++E L LF M I PD + LL
Sbjct: 367 ASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKC 426
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
+ L G HG I K + VCN LI Y K IG +V +FN M ++ I+
Sbjct: 427 ITCLSCARDGLVAHGYIVKLGF-GAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTIS 485
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
W ++IS NG A+E F M G + D V L++VL AC
Sbjct: 486 WNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPAC 528
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 165/575 (28%), Positives = 275/575 (47%), Gaps = 45/575 (7%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFV- 145
+ G L +F+ M +K ++W +++S + + + LF + R E L F+
Sbjct: 61 KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNM-RVESGLRIDPFIL 119
Query: 146 GVIH---GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
+ H GL++ D+ +GE +HG +K G + V ++L++MY + I+ ++F ++
Sbjct: 120 SLAHKACGLNS--DVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEM 177
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
+R+VVSW II L + +AL + M V + TF + +CA G+
Sbjct: 178 PMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGR 237
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
IHA+ +K + FV + L Y KC LE F ++S +++VSW +I
Sbjct: 238 EIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMG 297
Query: 323 SPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLG 377
++ I + + PNE+TF+ V+ + QLH LI+ +G V
Sbjct: 298 QEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVEN 357
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
S+MT YAK GQ + + ++ R DIV
Sbjct: 358 SIMTMYAK--------------------------------CGQLTSSSVIFHEMTRRDIV 385
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SW+ +IA + G E EL +MR P + S+LSAC + L G LH +
Sbjct: 386 SWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYV 445
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
+ V + LI+MY KCGSI + +IF+ + ++++WTA+I+ +G+++
Sbjct: 446 LSIGL-EHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREV 504
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
++ F ++ +G +PD V I VL+AC H GLV G F M++ Y + P +HY C++D
Sbjct: 505 IDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMID 564
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
LL R G L +AE +I MPF + ++W T L C+
Sbjct: 565 LLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACR 599
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 158/566 (27%), Positives = 271/566 (47%), Gaps = 42/566 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLLSCDSLNPV--E 57
M ++ +S+ ++IS Y +AL +F M + G F LN
Sbjct: 75 MSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNY 134
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G L +K GL + FVG+ALL +Y ++G + E VF +MP +++V+W +I++
Sbjct: 135 GELLHGYAVKTGLVNS-VFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLV 193
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G+ ++ + F E+ RS V +F + ++ L +G +IH +K GFD
Sbjct: 194 RAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSF 253
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VAN+L MY +C + +F+ + +RDVVSW TII L + A++ ++RM
Sbjct: 254 VANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESD 313
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN+ TF VI+ CA L G+ +HA ++ L + V ++++ YAKC L +
Sbjct: 314 VSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSS 373
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
+ F E++ ++IVSW+ +I GY+ + F L+ +++ G +P EF + VL +
Sbjct: 374 VIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMA 433
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+L QLH ++ +G E+ VL +L+ Y K G I +A
Sbjct: 434 ILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEA-------------------- 473
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
++ E DIVSW +I A +G +EV++LF+ + + PD+
Sbjct: 474 ------------SRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSV 521
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF+ +LSACS + LG + K IS +ID+ + G + + +
Sbjct: 522 TFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEA 581
Query: 533 MT-DRNVITWTALISALGLNGFAQRA 557
M R+ + W+ L+ A ++G +R
Sbjct: 582 MPFHRDDVVWSTLLRACRVHGDVERG 607
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 218/464 (46%), Gaps = 42/464 (9%)
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+L +N + + + +A +MF + +D +SW T+I + + +AL L+ M
Sbjct: 48 DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
V+ + + + GL + + G+ +H +K L VFVGSAL+D Y K +
Sbjct: 108 VESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKI 167
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFT-FSHVLRSS 352
F E+ +N+VSW A+I G L++ GY FS + RS
Sbjct: 168 FEGRRVFHEMPMRNVVSWTAIITG---------------LVRAGYNKEALVYFSEMWRS- 211
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS-----DALAFVTALNIPRAVVP 407
R+ Y++Y + + + + A SG ++ A A ++ V
Sbjct: 212 -------------RVEYDSYTFAIA--LKACADSGALNYGREIHAQAMKKGFDVSSFV-- 254
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
AN +A +YN+ G+ + L ++ D+VSW +I G + ++ F MR + +
Sbjct: 255 ANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDV 314
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P+ YTF +++S C+ L + G LH LI + +S + V N ++ MY KCG + SS
Sbjct: 315 SPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLS-VENSIMTMYAKCGQLTSSS 373
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
IF+EMT R++++W+ +I+ G A E M G KP AL +VL+AC +
Sbjct: 374 VIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMA 433
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
++ G +L + S G+E ++++ + G ++EA +I
Sbjct: 434 ILEHGKQLHAYV-LSIGLEHTAMVLSALINMYCKCGSIEEASRI 476
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 178/606 (29%), Positives = 299/606 (49%), Gaps = 40/606 (6%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G L A ++K + ++ +L+ Y + L + VF+ + K +++WN +++ +
Sbjct: 25 KGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGY 84
Query: 117 GKHGFVEDC--MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ G M LF + + +F G+ SN + FG+Q H + IK Y
Sbjct: 85 SQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFY 144
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ V +SL+NMY + ++ A ++F + R+ V+W T+I A G+A E++ M
Sbjct: 145 DVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMR 204
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ N+ F V+++ A + GK IH +K L + + +ALV YAKC +L+
Sbjct: 205 REEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLD 264
Query: 295 GAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSS- 352
+ F ++KN ++W+A+I GYA S S ++ L + G P+EFT VL +
Sbjct: 265 DSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACS 324
Query: 353 ---LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ Q+H ++++G+E+ Y++ +L+ YAKSG+ DA
Sbjct: 325 DACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDA----------------- 367
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
R G + L++PD+V W +IA NG+ ++ L L+ M+ I P
Sbjct: 368 -------RKG--------FNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILP 412
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ T S+L ACS L G +H K + + + + L MY KCG++ +
Sbjct: 413 NELTMASVLKACSNLAAFDQGRQIHARTIKYGL-GLEVTIGSALSTMYAKCGNLEEGNIV 471
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F M +R++I+W A+IS L NG+ + ALE F EM KPD V + VL+AC H GLV
Sbjct: 472 FRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLV 531
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
G F M +G+ P+++HY C+VD+L R G L EA++ I + +WR L
Sbjct: 532 DSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLG 591
Query: 650 GCQRCR 655
C+ R
Sbjct: 592 ACRNYR 597
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 164/563 (29%), Positives = 273/563 (48%), Gaps = 59/563 (10%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG--FEPTQFTFGGLLSCDS-LNPV-EG 58
+++V+S+N +I+ YS+ G + M L+ R P TF G+ + S L+ + G
Sbjct: 71 NKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFG 130
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q A +K F D FVG++LL +Y + G L E VF+ MP ++ VTW +++S +
Sbjct: 131 QQAHAVAIKMACF-YDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAI 189
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ +F + R E + E +F V+ L+ + ++ G+QIH L +K G L +
Sbjct: 190 QRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSI 249
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LV MY +C + + ++F+ ++ ++W+ +I A+S + KAL+L+ RM +
Sbjct: 250 LNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGI 309
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ T V V+N+C+ GK +H ++K E +++ +ALVD YAK E A
Sbjct: 310 NPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARK 369
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLR--SSLAF 355
F+ + ++V W ++I GY L +Q+ G PNE T + VL+ S+LA
Sbjct: 370 GFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAA 429
Query: 356 --QLLQLHCLIIRMGYENYEYVLGS-LMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
Q Q+H I+ G E +GS L T YAK G + + NI+
Sbjct: 430 FDQGRQIHARTIKYGL-GLEVTIGSALSTMYAKCGNLEE----------------GNIV- 471
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
++ DI+SWN +I+ + NG KE LELF+ MR PD+
Sbjct: 472 ---------------FRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDV 516
Query: 473 TFVSLLSACSKLCNLALGS-------SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
TFV++LSACS + + G GL+ K E + C ++D+ + G +
Sbjct: 517 TFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVE-----HYAC--MVDVLSRAGKLYE 569
Query: 526 SVKIFNEMT-DRNVITWTALISA 547
+ + T D + W L+ A
Sbjct: 570 AKEFIESTTIDHGLCLWRILLGA 592
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 218/423 (51%), Gaps = 13/423 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
MP+RN V++ ++IS Y+ +A +F M + +F F +LS ++ G
Sbjct: 172 MPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSG 231
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K GL + + AL+ +Y + G LD+ + VFE K+ +TW+++++ + +
Sbjct: 232 KQIHCLAVKTGLLVFLSIL-NALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQ 290
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + LF + + + +E + VGV++ S+ +E G+Q+H ++K GF+ +L +
Sbjct: 291 SGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYI 350
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LV+MY + A K F ++ D+V W ++I ++ AL LY RM ++ +
Sbjct: 351 MTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGI 410
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+ T V+ +C+ L G+ IHA+ IK L +V +GSAL YAKC NLE ++
Sbjct: 411 LPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNI 470
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + ++I+SWNA+I G + ++ L E+ Q +P++ TF +VL + L
Sbjct: 471 VFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGL 530
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYA-------KSGLISDALAFVTALNIPRAVVPANI 410
+ L RM ++ E+ L + YA ++G + +A F+ + I + I
Sbjct: 531 VDSGWLYFRMMFD--EFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRI 588
Query: 411 IAG 413
+ G
Sbjct: 589 LLG 591
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 26/204 (12%)
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
++P N + + L + +L G +LH I K SS ++ N LI+ Y KC + +
Sbjct: 3 LHPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKA 62
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRA-------LEKFREMEFLGFKPDRVALIAV 579
+F+ + +++VI+W LI NG++Q+ +E F+ M P+ +
Sbjct: 63 KLVFDRIHNKDVISWNCLI-----NGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGI 117
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV------VDLLVRYGHLKEAEKIIT 633
TA + + G +++ V +M ++ V +++ + G L EA ++
Sbjct: 118 FTAASNLSSIFFG-------QQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFD 170
Query: 634 TMPFPPNALIWRTFLEGCQRCRIA 657
MP N + W T + G R+A
Sbjct: 171 RMP-ERNEVTWATMISGYAIQRLA 193
>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 170/569 (29%), Positives = 298/569 (52%), Gaps = 45/569 (7%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F++MP++ V+WN+++S + G +E+ LF ++ R + SF ++ G+++ +
Sbjct: 3 LFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAKR 62
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
+ GEQ+HGLV+K G++ + V +SLV+MY +C + A F ++ + VSWN +I
Sbjct: 63 FDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIAG 122
Query: 217 LAESENFGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+ + A L M + V + TF ++ L K +HAKV+K LE
Sbjct: 123 FVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLEH 182
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEIS-NKNIVSWNALILGYASKSSPTSIF-LLIEL 333
++ + +A++ YA C + A F + +K+++SWN++I G + S F L E+
Sbjct: 183 EITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTEM 242
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLLQ-----LHCLIIRMGYENYEYVLGSLMTSYAK--S 386
+ + +T++ ++ S+ + + Q LH L+I+ G E V +L++ Y + +
Sbjct: 243 HRNWIETDIYTYTGIV-SACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPT 301
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
G++ DAL+ L L+ D+VSWN ++
Sbjct: 302 GVMKDALS--------------------------------LFESLKPKDLVSWNSIMTGF 329
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
+ NG ++ ++ F+Y+R++ I D+Y F ++L +CS L L LG H L K+ S+
Sbjct: 330 SQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSF-ESN 388
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREME 565
FV + LI MY KCG I ++ K F +++ + N I W A+I +G Q +L+ F +M
Sbjct: 389 EFVTSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMC 448
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
K D V A+LTAC H GL++EG+EL M Y ++P M+HY VDLL R G +
Sbjct: 449 NQNVKLDHVTFTAILTACSHTGLIQEGLELLNSMEPVYKIQPRMEHYAAAVDLLGRAGLV 508
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQRC 654
+ +++I +MP P+ ++ +TFL C+ C
Sbjct: 509 NKVKELIESMPLNPDPMVLKTFLGVCRAC 537
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 139/552 (25%), Positives = 272/552 (49%), Gaps = 27/552 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
MP R+ VS+N++IS Y+ CG +E++ +F M G ++F LL + G
Sbjct: 7 MPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAKRFDLG 66
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ V+K G C + +VG++L+ +Y + +++ F ++ + V+WN++++ F +
Sbjct: 67 EQVHGLVVKGGYEC-NVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIAGFVQ 125
Query: 119 HGFVEDCMFLFCEL----VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
V D F L +++ V + + +F ++ L + +Q+H V+K G ++
Sbjct: 126 ---VRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLEH 182
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRM 233
E+ + N++++ Y C + A+++F + +D++SWN++I L++ E A EL+ M
Sbjct: 183 EITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTEM 242
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN- 292
+ + + T+ ++++C+G ++ GKS+H VIK LE V +AL+ Y +
Sbjct: 243 HRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPTG 302
Query: 293 -LEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLR 350
++ A F + K++VSWN+++ G++ S ++ L +++ FS VLR
Sbjct: 303 VMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLR 362
Query: 351 SSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
S LQL H L + +E+ E+V SL+ Y+K G+I +A ++ +
Sbjct: 363 SCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHNTI 422
Query: 407 PANIIAGIYNRTGQYNETVKLLSQL----ERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
N + Y + G ++ L SQ+ + D V++ ++ AC+H G +E LEL M
Sbjct: 423 AWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNSM 482
Query: 463 RAA-RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
+I P + +A L L + + LI+ ++ D V + + CG
Sbjct: 483 EPVYKIQPRMEHYA---AAVDLLGRAGLVNKVKELIESMP-LNPDPMVLKTFLGVCRACG 538
Query: 522 SIGSSVKIFNEM 533
I + ++ N +
Sbjct: 539 EIEMATQVANHL 550
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 213/462 (46%), Gaps = 41/462 (8%)
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
++F ++ RD VSWNT+I + L+ M + + +F ++ A +
Sbjct: 2 RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAK 61
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
LG+ +H V+K EC+V+VGS+LVD YAKC+ +E A F EI N VSWNALI
Sbjct: 62 RFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIA 121
Query: 317 GYASKSSPTSIFLLIELLQL--GYRPNEFTFSHVLR----SSLAFQLLQLHCLIIRMGYE 370
G+ + F L+ L+++ ++ TF+ +L L Q+H ++++G E
Sbjct: 122 GFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLE 181
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ + ++++SYA GL+SDA L +
Sbjct: 182 HEITICNAMISSYANCGLVSDAKRVFDGLGGSK--------------------------- 214
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
D++SWN +IA + + + ELF M I D YT+ ++SACS + + G
Sbjct: 215 ----DLISWNSMIAGLSKHEQKESAFELFTEMHRNWIETDIYTYTGIVSACSGEEHQSFG 270
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGK--CGSIGSSVKIFNEMTDRNVITWTALISAL 548
SLHGL+ K + + T V N LI MY + G + ++ +F + +++++W ++++
Sbjct: 271 KSLHGLVIK-KGLEQVTSVSNALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGF 329
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
NG ++ A++ FR + + D A AVL +C ++ G + +S E
Sbjct: 330 SQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNE 389
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++ + + G ++ A K + N + W + G
Sbjct: 390 FVTSSLIL-MYSKCGVIENARKCFEQISSKHNTIAWNAMILG 430
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
++L ++ + D VSWN +I+ G + LF M+ Y D Y+F LL +
Sbjct: 1 MRLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASA 60
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
LG +HGL+ K + +V + L+DMY KC + + F E+ + N ++W AL
Sbjct: 61 KRFDLGEQVHGLVVKGG-YECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNAL 119
Query: 545 ISALGLNGFAQ 555
I+ GF Q
Sbjct: 120 IA-----GFVQ 125
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/497 (31%), Positives = 260/497 (52%), Gaps = 7/497 (1%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
+ +H +I +G ++L LV+ Q + A K+F + + +N +I + S
Sbjct: 53 KHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNS 112
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
+ K+L LY RM D + PNQ T +V+ +CA LG +HA+ K + V
Sbjct: 113 SDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQ 172
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYR 339
+A+++ Y C + A F +IS + +VSWN++I GY+ S ++ + E+ ++G
Sbjct: 173 NAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLE 232
Query: 340 PNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
P+ FT +L S L H ++ G E V +LM YAK G + A +
Sbjct: 233 PDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSV 292
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
+ + + VV + Y G + ++ +Q+ ++VSWN +I G Y E
Sbjct: 293 FDQM-LDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEA 351
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
++LF M + + ++ T V++LS+CS + +LALG H I I S T +CN +ID
Sbjct: 352 VDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSAT-LCNAIID 410
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY KCG++ +++ +F M ++N ++W +I AL L+G+ + A+E F +M+ G PD +
Sbjct: 411 MYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEIT 470
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+L+AC H GLV G FE MN ++G+ P+++HY C+VDLL R G L EA +I M
Sbjct: 471 FTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKM 530
Query: 636 PFPPNALIWRTFLEGCQ 652
P P+ ++W L C+
Sbjct: 531 PVKPDVVVWSALLGACR 547
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 223/509 (43%), Gaps = 82/509 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--G 58
+P N FN +I YS +L ++ M+ G P QFT +L + G
Sbjct: 94 IPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLG 153
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A K G+ + A V A+L +Y G + VF+D+ ++LV+WNS+++ + K
Sbjct: 154 VCVHAQSFKLGMG-SHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSK 212
Query: 119 HGFVEDCMFLFCELVRSEVALTESSF--VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G E+ + +F E+ EV L F VG++ + + + G +H ++ G + +
Sbjct: 213 MGRSEEAVLMFREM--QEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDS 270
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA------------------ 218
+V N+L++MY +C + A+ +F + +DVVSW +I A A
Sbjct: 271 IVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGK 330
Query: 219 -------------ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
+ + +A++L+ RM V N TT V +++SC+ + + LGK H
Sbjct: 331 NVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAH 390
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT 325
+ + N + + +A++D YAKC L+ A F + KN VSWN +I A
Sbjct: 391 SYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGK 450
Query: 326 SIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
+ E +Q G P+E TF+ L+++ +
Sbjct: 451 EAIEMFEKMQASGVCPDEITFT-------------------------------GLLSACS 479
Query: 385 KSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSW 439
SGL+ + +N+ + P + + R G E + L+ ++ +PD+V W
Sbjct: 480 HSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVW 539
Query: 440 NIVIAACAHNGD-------YKEVLELFKY 461
+ ++ AC G+ K++LEL +Y
Sbjct: 540 SALLGACRTYGNLAIGKQIMKQLLELGRY 568
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 219/459 (47%), Gaps = 11/459 (2%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F+ +P+ + +N ++ + + L+ +V + + + V+ + +
Sbjct: 90 LFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSC 149
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
G +H K G V N+++N+Y C I SA ++F D+ R +VSWN++I
Sbjct: 150 YWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMING 209
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
++ +A+ ++ M + P+ T V +++ N LG+ +H ++ +E D
Sbjct: 210 YSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEID 269
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
V +AL+D YAKC NL+ A F ++ +K++VSW +I YA+ I +E
Sbjct: 270 SIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHG---LIDCALEFFNQ 326
Query: 337 GYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG---LI 389
N +++ ++ + L + + L + G + L ++++S + G L
Sbjct: 327 MPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALG 386
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
A +++ NI + N I +Y + G + + + + VSWN++I A A +
Sbjct: 387 KQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALH 446
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
G KE +E+F+ M+A+ + PD TF LLSACS + G ++ T IS D
Sbjct: 447 GYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEH 506
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISA 547
++D+ G+ G +G ++ + +M + +V+ W+AL+ A
Sbjct: 507 YACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGA 545
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 165/575 (28%), Positives = 274/575 (47%), Gaps = 45/575 (7%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFV- 145
+ G L +F+ M +K ++W +++S + + + LF + R E L F+
Sbjct: 61 KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNM-RVESGLRIDPFIL 119
Query: 146 GVIH---GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
+ H GL++ D+ +GE +HG +K G + V ++L++MY + I+ ++F ++
Sbjct: 120 SLAHKACGLNS--DVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEM 177
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
+R+VVSW II L + +AL + M V + TF + +CA G+
Sbjct: 178 PMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGR 237
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
IHA+ +K + FV + L Y KC LE F ++S +++VSW +I
Sbjct: 238 EIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMG 297
Query: 323 SPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLG 377
++ I + + PNE+TF+ V+ + QLH LI+ +G V
Sbjct: 298 QEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVEN 357
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
S+MT YAK GQ + + ++ R DIV
Sbjct: 358 SIMTMYAK--------------------------------CGQLTSSSVIFHEMTRRDIV 385
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SW+ +IA G E EL +MR P + S+LSAC + L G LH +
Sbjct: 386 SWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYV 445
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
+ V + LI+MY KCGSI + +IF+ + ++++WTA+I+ +G+++
Sbjct: 446 LSIGL-EHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREV 504
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
++ F ++ +G +PD V I VL+AC H GLV G F M++ Y + P +HY C++D
Sbjct: 505 IDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMID 564
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
LL R G L +AE +I MPF + ++W T L C+
Sbjct: 565 LLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACR 599
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 158/566 (27%), Positives = 270/566 (47%), Gaps = 42/566 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLLSCDSLNPV--E 57
M ++ +S+ ++IS Y +AL +F M + G F LN
Sbjct: 75 MSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNY 134
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G L +K GL + FVG+ALL +Y ++G + E VF +MP +++V+W +I++
Sbjct: 135 GELLHGYAVKTGLVNS-VFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLV 193
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G+ ++ + F E+ RS V +F + ++ L +G +IH +K GFD
Sbjct: 194 RAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSF 253
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VAN+L MY +C + +F+ + +RDVVSW TII L + A++ ++RM
Sbjct: 254 VANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESD 313
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN+ TF VI+ CA L G+ +HA ++ L + V ++++ YAKC L +
Sbjct: 314 VSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSS 373
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
+ F E++ ++IVSW+ +I GY + F L+ +++ G +P EF + VL +
Sbjct: 374 VIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMA 433
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+L QLH ++ +G E+ VL +L+ Y K G I +A
Sbjct: 434 ILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEA-------------------- 473
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
++ E DIVSW +I A +G +EV++LF+ + + PD+
Sbjct: 474 ------------SRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSV 521
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF+ +LSACS + LG + K IS +ID+ + G + + +
Sbjct: 522 TFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEA 581
Query: 533 MT-DRNVITWTALISALGLNGFAQRA 557
M R+ + W+ L+ A ++G +R
Sbjct: 582 MPFHRDDVVWSTLLRACRVHGDVERG 607
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 218/464 (46%), Gaps = 42/464 (9%)
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+L +N + + + +A +MF + +D +SW T+I + + +AL L+ M
Sbjct: 48 DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
V+ + + + GL + + G+ +H +K L VFVGSAL+D Y K +
Sbjct: 108 VESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKI 167
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFT-FSHVLRSS 352
F E+ +N+VSW A+I G L++ GY FS + RS
Sbjct: 168 FEGRRVFHEMPMRNVVSWTAIITG---------------LVRAGYNKEALVYFSEMWRS- 211
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS-----DALAFVTALNIPRAVVP 407
R+ Y++Y + + + + A SG ++ A A ++ V
Sbjct: 212 -------------RVEYDSYTFAIA--LKACADSGALNYGREIHAQAMKKGFDVSSFV-- 254
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
AN +A +YN+ G+ + L ++ D+VSW +I G + ++ F MR + +
Sbjct: 255 ANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDV 314
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P+ YTF +++S C+ L + G LH LI + +S + V N ++ MY KCG + SS
Sbjct: 315 SPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLS-VENSIMTMYAKCGQLTSSS 373
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
IF+EMT R++++W+ +I+ G A E M G KP AL +VL+AC +
Sbjct: 374 VIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMA 433
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
++ G +L + S G+E ++++ + G ++EA +I
Sbjct: 434 ILEHGKQLHAYV-LSIGLEHTAMVLSALINMYCKCGSIEEASRI 476
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 181/662 (27%), Positives = 320/662 (48%), Gaps = 49/662 (7%)
Query: 37 FEPTQFTFGGLLSCDSLNPVEGA-QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVV 95
E +Q + + C SL + A +L A ++ GL + F+ LL +Y G + +
Sbjct: 1 MEMSQKFYESMKECASLRSIPIARKLHAQLIFMGL-KSSIFLQNHLLNMYSNCGLISDAY 59
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
VF + ++ +WN+++S F G + + LF ++ + S G H E
Sbjct: 60 RVFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEA 119
Query: 156 D---------LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF------- 199
L+ Q+HG K F + V S+++MY +C + A+K+F
Sbjct: 120 TIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPS 179
Query: 200 ------------------KDVEI------RDVVSWNTIIGALAESENFGKALELYLRMSV 235
K +E+ RD VSWNT+I L++ + L +L M
Sbjct: 180 LFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWN 239
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
PN T+ V+++C + + G +HA++++ DV+ G L+D YAKC LE
Sbjct: 240 QGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLES 299
Query: 296 AHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F ++ N VSW +LI G A ++ L ++ ++ ++FT + VL L+
Sbjct: 300 ARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLS 359
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ + QLH I G ++ V +L+T YAK G + A + I R ++
Sbjct: 360 QKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPI-RDIISWTA 418
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ +++ G + + ++ +++SWN ++A G ++E L+++ M + D
Sbjct: 419 MITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTD 478
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF + +SAC+ L L LG+ + +K SS+ V N ++ MY +CG I + K+F
Sbjct: 479 WITFSTSISACADLAVLILGNQILAQAEKLGF-SSNVSVANSVVTMYSRCGQIEEAQKMF 537
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + +N+++W A+++ NG ++ +E F +M +G PD+++ ++VL+ C H G V
Sbjct: 538 SSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVS 597
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
EG F M + +G+ P +H+ C+VDLL R G L++A+ +I MPF PNA IW L
Sbjct: 598 EGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAA 657
Query: 651 CQ 652
C+
Sbjct: 658 CR 659
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 153/603 (25%), Positives = 296/603 (49%), Gaps = 34/603 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALR-------MFLYMINRGFEPTQFTFGGLLSCDSL 53
MP+R+ VS+NS++S Y G +E ++ + L + GF +F F G+ +C
Sbjct: 96 MPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQLHGF-AEKFDF-GIDTCVET 153
Query: 54 NPVEG-AQLQASVLKNGLFC----ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVT 108
+ ++ + A +FC F +++ Y ++G + + + +F MP + V+
Sbjct: 154 SVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVS 213
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
WN+++SI +HGF + + F E+ ++ V+ ++ DLE+G +H ++
Sbjct: 214 WNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIV 273
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
+ ++ L++MY +C + SA ++F + + VSW ++IG +A++ +AL
Sbjct: 274 RMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALV 333
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
L+ +M V +Q T V+ C ++ +G+ +HA I L+ V V +ALV YA
Sbjct: 334 LFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYA 393
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
KC ++ A+ F + ++I+SW A+I + S + E N +++ +
Sbjct: 394 KCGDVWKANHAFELMPIRDIISWTAMITAF---SQAGDVEKAREYFDKMPERNVISWNSM 450
Query: 349 LRSSLAF----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI---SDALAFVTALNI 401
L + + + L+++ ++R G + + +++ A ++ + LA L
Sbjct: 451 LATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGF 510
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
V AN + +Y+R GQ E K+ S + ++VSWN ++A A NG ++V+E+F+
Sbjct: 511 SSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEK 570
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS--SDTFVCNMLIDMYGK 519
M PD ++VS+LS CS ++ G + K IS S+ FVC ++D+ G+
Sbjct: 571 MLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVC--MVDLLGR 628
Query: 520 CGSIGSSVKIFNEMTDR-NVITWTALISALGLNG---FAQRALEKFREMEFLGFKPDRVA 575
G + + + N+M + N W AL++A ++G A+ A++ E++ G P
Sbjct: 629 AGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEG--PGSYC 686
Query: 576 LIA 578
L+A
Sbjct: 687 LLA 689
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 186/587 (31%), Positives = 287/587 (48%), Gaps = 41/587 (6%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVT-WNSIVSI 115
+G + V+ GL D F+ L+ Y D VF++M ++ WN +++
Sbjct: 21 QGKLIHQKVVTLGLQ-NDIFLCKTLINQYLSCHLYDHAKCVFDNMENPCEISLWNGLMAG 79
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ K+ + + LF +L+ +S ++ V G+ IH +IK G
Sbjct: 80 YTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMM 139
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+++V +SLV MY +C A +F ++ +DV WNT+I +S NF ALE + M
Sbjct: 140 DIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMR 199
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
PN T I+SCA L + G IH ++I + D F+ SALVD Y KC +LE
Sbjct: 200 RFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLE 259
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTS-IFLLIELLQLGYRPNEFTFSHVL---- 349
A F ++ K +V+WN++I GY K S I L + G +P T S ++
Sbjct: 260 MAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCS 319
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
RS+ + +H IR + +V SLM Y K G + A
Sbjct: 320 RSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELA----------------- 362
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
K+ + + +VSWN++I+ G E L LF MR + +
Sbjct: 363 ---------------EKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVES 407
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D TF S+L+ACS+L L G +H LI + ++ ++ V L+DMY KCG++ + +
Sbjct: 408 DAITFTSVLTACSQLAALEKGKEIHNLIIEKKL-DNNEVVMGALLDMYAKCGAVDEAFSV 466
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F + R++++WT++I+A G +G A ALE F EM KPDRVA +A+L+AC H GLV
Sbjct: 467 FKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLV 526
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
EG F +M YG+ P ++HY C++DLL R G L EA +I+ P
Sbjct: 527 DEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNP 573
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 140/539 (25%), Positives = 256/539 (47%), Gaps = 55/539 (10%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGF-EPTQFTFGGLL-SCDSLNP-VEGAQLQASV 65
+N +++ Y++ +AL +F +++ + +P +T+ + +C L+ V G + +
Sbjct: 73 WNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCL 132
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
+K GL D VG++L+G+YG+ ++ + +F +MP K + WN+++S + + G +D
Sbjct: 133 IKTGLM-MDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDA 191
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
+ F + R + I + DL G +IH +I +GF + ++++LV+M
Sbjct: 192 LEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDM 251
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C + A ++F+ + + VV+WN++I + ++L+ RM + V P TT
Sbjct: 252 YGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTL 311
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
+I C+ + GK +H I+N ++ DVFV S+L+D Y KC +E A F I
Sbjct: 312 SSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPK 371
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLL----QL 360
+VSWN +I GY ++ L ++ Y + TF+ VL + L ++
Sbjct: 372 SKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEI 431
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H LII +N E V+G+L+ YAK G + +A +
Sbjct: 432 HNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFS-------------------------- 465
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+ L + D+VSW +I A +G LELF M + + PD F+++LSA
Sbjct: 466 ------VFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSA 519
Query: 481 CSKLCNLALGS-------SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
C + G +++G+I + E S LID+ G+ G + + +I +
Sbjct: 520 CGHAGLVDEGCYYFNQMINVYGIIPRVEHYSC-------LIDLLGRAGRLHEAYEILQQ 571
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 195/355 (54%), Gaps = 6/355 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPV-EG 58
MP+++V +N++IS Y + G +DAL F M GFEP T + SC L + G
Sbjct: 167 MPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRG 226
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ ++ +G F D+F+ +AL+ +YG+ G L+ + +FE MP+K++V WNS++S +G
Sbjct: 227 MEIHEELINSG-FLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGL 285
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + C+ LF + V T ++ +I S L G+ +HG I+N ++ V
Sbjct: 286 KGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFV 345
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII-GALAESENFGKALELYLRMSVDI 237
+SL+++YF+C + AEK+FK + VVSWN +I G +AE + F +AL L+ M
Sbjct: 346 NSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLF-EALGLFSEMRKSY 404
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V + TF V+ +C+ L GK IH +I+ L+ + V AL+D YAKC ++ A
Sbjct: 405 VESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAF 464
Query: 298 LCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRS 351
F + +++VSW ++I Y S ++ L E+LQ +P+ F +L +
Sbjct: 465 SVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSA 519
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 227/493 (46%), Gaps = 45/493 (9%)
Query: 153 NEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS-WN 211
N + L+ G+ IH V+ G ++ + +L+N Y C A+ +F ++E +S WN
Sbjct: 15 NSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPCEISLWN 74
Query: 212 TIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
++ ++ + +ALEL+ ++ + P+ T+ V +C GL +LGK IH +IK
Sbjct: 75 GLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIK 134
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLL 330
L D+ VGS+LV Y KC+ E A F+E+ K++ WN +I Y +
Sbjct: 135 TGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEY 194
Query: 331 IELL-QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS--LMTSYAKSG 387
L+ + G+ PN T + + S +LL L+ G E +E ++ S L+ S+ S
Sbjct: 195 FGLMRRFGFEPNSVTITTAISS--CARLLDLN-----RGMEIHEELINSGFLLDSFISSA 247
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
L+ +Y + G +++ Q+ + +V+WN +I+
Sbjct: 248 LVD-----------------------MYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYG 284
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
GD ++LFK M + P T SL+ CS+ L G +HG + I D
Sbjct: 285 LKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNR-IQPDV 343
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
FV + L+D+Y KCG + + KIF + V++W +IS G AL F EM
Sbjct: 344 FVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKS 403
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV----VDLLVRYG 623
+ D + +VLTAC + +G E+ + +E ++D+ V +D+ + G
Sbjct: 404 YVESDAITFTSVLTACSQLAALEKGKEIHNLI-----IEKKLDNNEVVMGALLDMYAKCG 458
Query: 624 HLKEAEKIITTMP 636
+ EA + +P
Sbjct: 459 AVDEAFSVFKCLP 471
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 196/413 (47%), Gaps = 48/413 (11%)
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
++ +C ++ GK IH KV+ L+ D+F+ L++ Y C + A F + N
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68
Query: 308 IVS-WNALILGYASKSSPTSIFLLIE-LLQLGY-RPNEFTFSHVLRSSLAFQLLQLHCLI 364
+S WN L+ GY L E LL Y +P+ +T+ V ++
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGL--------- 119
Query: 365 IRMGYENYEYVLGSLM-TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
+ YVLG ++ T K+GL+ D +V + + G+Y + + +
Sbjct: 120 -------HRYVLGKMIHTCLIKTGLMMD-------------IVVGSSLVGMYGKCNAFEK 159
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
+ L +++ D+ WN VI+ +G++K+ LE F MR P++ T + +S+C++
Sbjct: 160 AIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCAR 219
Query: 484 LCNLALGSSLHGLIKKTEIISS----DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
L +L G +H E+I+S D+F+ + L+DMYGKCG + +++IF +M + V+
Sbjct: 220 LLDLNRGMEIH-----EELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVV 274
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG--MELFE 597
W ++IS GL G ++ F+ M G KP L +++ C + EG + +
Sbjct: 275 AWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYT 334
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
NR ++P++ ++DL + G ++ AEKI +P + W + G
Sbjct: 335 IRNR---IQPDVFVNSSLMDLYFKCGKVELAEKIFKLIP-KSKVVSWNVMISG 383
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 140/259 (54%), Gaps = 5/259 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL--SCDSLNPVEG 58
MP + VV++NS+IS Y G + +++F M N G +PT T L+ S +EG
Sbjct: 268 MPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEG 327
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ ++N + D FV ++L+ LY + G ++ +F+ +P+ +V+WN ++S +
Sbjct: 328 KFVHGYTIRNRIQ-PDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVA 386
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + + LF E+ +S V +F V+ S LE G++IH L+I+ D +V
Sbjct: 387 EGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVV 446
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+L++MY +C + A +FK + RD+VSW ++I A + ALEL+ M V
Sbjct: 447 MGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNV 506
Query: 239 FPNQTTFVYVINSC--AGL 255
P++ F+ ++++C AGL
Sbjct: 507 KPDRVAFLAILSACGHAGL 525
>gi|296084954|emb|CBI28363.3| unnamed protein product [Vitis vinifera]
Length = 930
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 196/719 (27%), Positives = 333/719 (46%), Gaps = 100/719 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG----FEPTQFTFG------GLLSC 50
MP+R++VS+ ++S Y+R G + L MF M+ P F F G++ C
Sbjct: 77 MPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRPDSFVFAVVLRACGMVEC 136
Query: 51 DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWN 110
S G + V+K D+FV AL+ +YG G L++ VF + + LV W+
Sbjct: 137 LSY----GRGVHGLVVKQSSV-VDSFVENALVSMYGSCGALEDAAVVFGGIDKPDLVGWS 191
Query: 111 SIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
SI+S + K+G E+ + +FC++V + +F V+ +N + +FG Q H +IK
Sbjct: 192 SILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKM 251
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
GFD L + NSL++ Y +C + ++F + +++VSWNT I + ++ +AL ++
Sbjct: 252 GFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIF 311
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
+ ++ + + + ++ + +GL + GK IH +++ +E + +V S+L+D Y C
Sbjct: 312 QILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRYVVSSLLDMYIGC 371
Query: 291 ----------------------------------------DNLEGAHLCFSEISNKNIVS 310
+LE A F+ + +
Sbjct: 372 IDHESLYPRVEVPLKLLNYLEGGGYDEFIMTSLLKWCSLESSLETAKRVFTRVEQPDTAP 431
Query: 311 WNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL----QLHCLII 365
W+ALI G++ L +Q G + NEFTF+ V+ + LA + L +LHC I+
Sbjct: 432 WSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILACLALENLRKGKELHCKIL 491
Query: 366 RMGYE-NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
R GYE N+ V N + +Y+ Q+ +
Sbjct: 492 RSGYESNFSVV---------------------------------NTLINLYSELWQHKQA 518
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+KL S + +I SWN +I AC DY+ + +L ++ + D + + ++CS
Sbjct: 519 LKLCSMIPDSEI-SWNFLIRACLGAEDYEIIHKLLWRIQVSHGNLDPVSACDIFASCSSP 577
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
L +G+ H + K +IS T + N LI MY CG +V+ FN M +++ +WT++
Sbjct: 578 VLLNVGTQAHAYMTKRGLISHPT-ISNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSI 636
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
+SA +G AL +M + D+ +VL AC GLV E LF M YG
Sbjct: 637 LSARVEHGHPSEALNLISQMRWKNKPADQSTFRSVLNACAQMGLVDEAFRLFFSMKEVYG 696
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP-FPPNALIWRTFLEGCQ---RCRIAKY 659
+EP +HY C+V++L R G +E I +P F LIWRT L + ++A+Y
Sbjct: 697 IEPLEEHYSCMVEVLGRAGMFEEVLDFINGVPTFKLGPLIWRTLLSSSRIHGNMKVAQY 755
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 158/633 (24%), Positives = 289/633 (45%), Gaps = 74/633 (11%)
Query: 82 LGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVA--L 139
L +Y G + E +F++MP +SLV+W ++S + +HG + + +F +++ L
Sbjct: 58 LRMYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLL 117
Query: 140 TESSFV--GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEK 197
SFV V+ + L +G +HGLV+K + V N+LV+MY C + A
Sbjct: 118 RPDSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAV 177
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQN 257
+F ++ D+V W++I+ ++ + L ++ M + P+ F V+ +C L+
Sbjct: 178 VFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLEC 237
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
G H +IK + +++ ++L+DFYAKC +LEG FS +S KN+VSWN I G
Sbjct: 238 WDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFING 297
Query: 318 YASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENY 372
Y + + L++ + ++F+ +L++ L ++H I+R G E
Sbjct: 298 YVHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETN 357
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV------- 425
YV+ SL+ Y G I + PR VP ++ Y G Y+E +
Sbjct: 358 RYVVSSLLDMYI--GCIDHESLY------PRVEVPLKLLN--YLEGGGYDEFIMTSLLKW 407
Query: 426 -----------KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
++ +++E+PD W+ +I+ + NG + E L+LF+ M+ I + +TF
Sbjct: 408 CSLESSLETAKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTF 467
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S++ AC L NL G LH I ++ S+ V N LI++Y + ++K+ + +
Sbjct: 468 TSVILACLALENLRKGKELHCKILRSG-YESNFSVVNTLINLYSELWQHKQALKLCSMIP 526
Query: 535 DRNVITWTALISA-LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR--------- 584
D I+W LI A LG + +R ++ D V+ + +C
Sbjct: 527 DSE-ISWNFLIRACLGAEDYEIIHKLLWR-IQVSHGNLDPVSACDIFASCSSPVLLNVGT 584
Query: 585 --HGGLVREGM-----------------ELFERMNRSYGVEPEMD--HYHCVVDLLVRYG 623
H + + G+ F+ +++ + PE D + ++ V +G
Sbjct: 585 QAHAYMTKRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHG 644
Query: 624 HLKEAEKIITTMPF---PPNALIWRTFLEGCQR 653
H EA +I+ M + P + +R+ L C +
Sbjct: 645 HPSEALNLISQMRWKNKPADQSTFRSVLNACAQ 677
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/521 (23%), Positives = 219/521 (42%), Gaps = 85/521 (16%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM----SV 235
N + MY + A K+F ++ R +VSW ++ A + L ++ M
Sbjct: 55 NLYLRMYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGG 114
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
++ P+ F V+ +C ++ G+ +H V+K + D FV +ALV Y C LE
Sbjct: 115 GLLRPDSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALED 174
Query: 296 AHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A + F I ++V W++++ GY + + +++ G P+ F FS VL +
Sbjct: 175 AAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTN 234
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ Q HC II+MG+++ Y+ SLM YAK G +
Sbjct: 235 LECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEG------------------- 275
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
++ S + ++VSWN I HN Y E L +F+ + D
Sbjct: 276 -------------MRRVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIFQILMEEVSQCD 322
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC---------- 520
+++ +S+L A S L +L G +HG I + I ++ +V + L+DMY C
Sbjct: 323 DFSLLSILKAVSGLGHLDHGKEIHGYILRAG-IETNRYVVSSLLDMYIGCIDHESLYPRV 381
Query: 521 ------------------------------GSIGSSVKIFNEMTDRNVITWTALISALGL 550
S+ ++ ++F + + W+ALIS
Sbjct: 382 EVPLKLLNYLEGGGYDEFIMTSLLKWCSLESSLETAKRVFTRVEQPDTAPWSALISGHSW 441
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
NG AL+ FR+M+F G K + +V+ AC +R+G EL ++ RS G E
Sbjct: 442 NGCFAEALKLFRKMQFDGIKANEFTFTSVILACLALENLRKGKELHCKILRS-GYESNFS 500
Query: 611 HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ +++L K+A K+ + + P + + W + C
Sbjct: 501 VVNTLINLYSELWQHKQALKLCSMI--PDSEISWNFLIRAC 539
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 166/383 (43%), Gaps = 58/383 (15%)
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
LQ++ + ++ + +N + + + + Y ++ A F E+ +++VSW +
Sbjct: 29 LQSNHIAQTKLKPIPQNEIHARTRLFNLYLRMYVNAGAMQEARKLFDEMPERSLVSWTIV 88
Query: 315 ILGYASKSSPTSIFLLIELLQLG-----YRPNEFTFSHVLRSSLAFQLLQ----LHCLII 365
+ GYA + + ++ + G RP+ F F+ VLR+ + L +H L++
Sbjct: 89 MSGYARHGPASEVLMMFWDMLCGSGGGLLRPDSFVFAVVLRACGMVECLSYGRGVHGLVV 148
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
+ +V +L++ Y G + DA A + GI
Sbjct: 149 KQSSVVDSFVENALVSMYGSCGALEDA---------------AVVFGGI----------- 182
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
++PD+V W+ +++ NG +E L +F M + I PD + F +L AC+ L
Sbjct: 183 ------DKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLE 236
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
G+ H I K S ++ N L+D Y KCG + ++F+ M+++N+++W I
Sbjct: 237 CWDFGTQAHCYIIKMGF-DSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFI 295
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-----------HGGLVREGME 594
+ N AL F+ + + D +L+++L A HG ++R G+E
Sbjct: 296 NGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIE 355
Query: 595 LFERMNRSYGVEPEMDHYHCVVD 617
NR Y V +D Y +D
Sbjct: 356 ----TNR-YVVSSLLDMYIGCID 373
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 180/636 (28%), Positives = 311/636 (48%), Gaps = 35/636 (5%)
Query: 20 GYVEDALRMFLYMINRGFEPTQFTFGGLLS-CD-SLNPVEGAQLQASVLKNGLFCADAFV 77
G +E A++ M+ E + + LL C+ P EG+++ ++ + C +
Sbjct: 76 GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVY-ELVSSSKSCLCVRL 134
Query: 78 GTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEV 137
G ALL ++ R G L + VF M + + +WN +V + K G ++ + L+ ++ +E+
Sbjct: 135 GNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI 194
Query: 138 ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEK 197
+F V+ + D+ G++IH VI+ GF+ ++ V N+L+ MY +C I +A
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQN 257
+F + RD +SWN +I E+ + LEL+ M V P+ T V ++C L N
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
LG+ +H V+K+ D+ + ++L+ Y+ LE A FS + +K++VSW A+I
Sbjct: 315 ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIAS 374
Query: 318 YASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
S P ++++L G P+E T VL + L L G +E +
Sbjct: 375 LVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDL-------GIRLHEIAI 427
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
K+GL+S V+ +N + +Y++ + +++ + ++
Sbjct: 428 --------KTGLVSH-------------VIVSNSLIDMYSKCKCVDNALEVFRNISGKNV 466
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
VSW +I N E L F+ M+ + + P++ T +S+LSAC+++ L G +H
Sbjct: 467 VSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAH 525
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
+T + D F+ N ++DMY +CG ++ FN ++V W L++ G A+
Sbjct: 526 ALRTGV-GFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQGQAKL 583
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
A+E F +M L PD + I++L AC G+V EG+E F M Y + P + HY CVV
Sbjct: 584 AVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVV 643
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
D+L R G L +A I MP P+A IW L C+
Sbjct: 644 DILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACR 679
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 153/557 (27%), Positives = 272/557 (48%), Gaps = 47/557 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
M +R+V S+N ++ Y++ G ++AL ++ M+ P +TF +L +C ++ + G
Sbjct: 158 MSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARG 217
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ A V++ G F +D VG AL+ +Y + G + +F+ MP++ ++WN+++S + +
Sbjct: 218 KEIHAHVIRFG-FESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFE 276
Query: 119 HGFVEDCMFLFC---ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+G + + LF EL +T ++ L NE+ G +HG V+K+ F +
Sbjct: 277 NGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNER---LGRGVHGYVVKSEFGGD 333
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ + NSL+ MY + AE +F +E +DVVSW +I +L + KA+E Y M +
Sbjct: 334 ISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMEL 393
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ + P++ T V V+++CA + + LG +H IK L V V ++L+D Y+KC ++
Sbjct: 394 EGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDN 453
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
A F IS KN+VSW +LILG + L ++ +PN T VL +
Sbjct: 454 ALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVLSACARI 513
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L ++H +R G ++ +++ Y + G V ALN
Sbjct: 514 GALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCG------RKVPALN----------- 556
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
Q+N ++ D+ +WNI++ A G K +ELF M I+PD
Sbjct: 557 --------QFNS--------QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDE 600
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+SLL ACSK + G ++K ++ + ++D+ G+ G + +
Sbjct: 601 ITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQ 660
Query: 532 EMTDR-NVITWTALISA 547
+M R + W AL++A
Sbjct: 661 DMPIRPDAAIWGALLNA 677
>gi|302801528|ref|XP_002982520.1| hypothetical protein SELMODRAFT_116755 [Selaginella moellendorffii]
gi|300149619|gb|EFJ16273.1| hypothetical protein SELMODRAFT_116755 [Selaginella moellendorffii]
Length = 694
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 174/648 (26%), Positives = 318/648 (49%), Gaps = 40/648 (6%)
Query: 32 MINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
M +P + TF LL +CDS +E G Q+ A V L +D V A++G+Y +
Sbjct: 1 MAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCE 60
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH 149
D ++VF +M + L++WN+ ++ + G + L + +A + +FV ++
Sbjct: 61 RADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALN 120
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
+ L G IH LV++ G + ++++ +LV MY +C + SA ++F + R+VVS
Sbjct: 121 ACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVS 180
Query: 210 WNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
WN ++ + + +F +A+EL+ RM +V +V P + +F+ V+N+ + G+ IH +
Sbjct: 181 WNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTREALAEGRRIHEMI 240
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
+ L + V +ALV Y +C + A FS + +++VSWNA+I YA
Sbjct: 241 QERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQSG------ 294
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
L E++ L +R RS A ++ + +I + S+ G+
Sbjct: 295 LACEVVNLFHR------MRAERSMAARDVISWNTMITGYVQAGDPFSALSIFKRMLLEGI 348
Query: 389 ISDALAFVTALNI--PRAV----------------------VPANIIAGIYNRTGQYNET 424
+ + F++ L++ RA+ + A I +Y + G+ +
Sbjct: 349 RGNQVTFMSLLSVCDSRALLRQGETIHRCVIDQTPELSSDPIVAAAIVNMYGKCGELDTA 408
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
L ++ SWN +I+A A +G ++ +L + MR + PD TF++LL+AC
Sbjct: 409 RHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAG 468
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
+ G +H I + + DT V N L++ Y KCG++ ++ +F + R+V++W +
Sbjct: 469 GAVRQGKMIHARIIDSG-LEKDTVVANALVNFYSKCGNLDTATSLFGALDYRDVVSWNGI 527
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I+ NG A+ AL+ M+ G +PD + + +L+A H G +R+G + F M +
Sbjct: 528 IAGFAHNGHAREALKSMWLMQQDGVRPDAITFLTILSASSHAGFLRQGGDDFVSMAVDHE 587
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+E ++HY C++DLL R G + EAE ++ M + W T L C+
Sbjct: 588 LERGVEHYGCMIDLLGRAGRIGEAEYFVSAMRDEDKEVSWMTLLSACE 635
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 173/613 (28%), Positives = 284/613 (46%), Gaps = 97/613 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSC-DSLNPVEG 58
M +R+++S+N+ I+A + G L + M G P + TF L +C S + G
Sbjct: 72 MRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNG 131
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A VL+ G+ D +GTAL+ +YGR GCL+ +F MP +++V+WN++V+
Sbjct: 132 RLIHALVLERGME-GDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTL 190
Query: 119 HGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + + LF +V + V T SF+ V++ ++ + L G +IH ++ + ++
Sbjct: 191 NAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTREALAEGRRIHEMIQERQLLSQIE 250
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES----------------- 220
VAN+LV MY +C G+ AE++F +E RD+VSWN +I A A+S
Sbjct: 251 VANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQSGLACEVVNLFHRMRAER 310
Query: 221 ---------------------ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
+ F AL ++ RM ++ + NQ TF+ +++ C
Sbjct: 311 SMAARDVISWNTMITGYVQAGDPF-SALSIFKRMLLEGIRGNQVTFMSLLSVCDSRALLR 369
Query: 260 LGKSIHAKVIKNA--LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
G++IH VI L D V +A+V+ Y KC L+ A F + S++N+ SWN++I
Sbjct: 370 QGETIHRCVIDQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISA 429
Query: 318 YASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA----FQLLQLHCLIIRMGYENY 372
YA F L E ++ G P+ TF +L + +A Q +H II G E
Sbjct: 430 YALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAGGAVRQGKMIHARIIDSGLE-- 487
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
+ V AN + Y++ G + L L+
Sbjct: 488 ------------------------------KDTVVANALVNFYSKCGNLDTATSLFGALD 517
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
D+VSWN +IA AHNG +E L+ M+ + PD TF+++LSA S L G
Sbjct: 518 YRDVVSWNGIIAGFAHNGHAREALKSMWLMQQDGVRPDAITFLTILSASSHAGFLRQGGD 577
Query: 493 L-------HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV-ITWTAL 544
H L + E + C +ID+ G+ G IG + + M D + ++W L
Sbjct: 578 DFVSMAVDHELERGVE-----HYGC--MIDLLGRAGRIGEAEYFVSAMRDEDKEVSWMTL 630
Query: 545 ISALGLNGFAQRA 557
+SA ++G +RA
Sbjct: 631 LSACEVHGDEERA 643
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 180/636 (28%), Positives = 311/636 (48%), Gaps = 35/636 (5%)
Query: 20 GYVEDALRMFLYMINRGFEPTQFTFGGLLS-CD-SLNPVEGAQLQASVLKNGLFCADAFV 77
G +E A++ M+ E + + LL C+ P EG+++ ++ + C +
Sbjct: 76 GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVY-ELVSSSKSCLCVRL 134
Query: 78 GTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEV 137
G ALL ++ R G L + VF M + + +WN +V + K G ++ + L+ ++ +E+
Sbjct: 135 GNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI 194
Query: 138 ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEK 197
+F V+ + D+ G++IH VI+ GF+ ++ V N+L+ MY +C I +A
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQN 257
+F + RD +SWN +I E+ + LEL+ M V P+ T V ++C L N
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
LG+ +H V+K+ D+ + ++L+ Y+ LE A FS + +K++VSW A+I
Sbjct: 315 ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIAS 374
Query: 318 YASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
S P ++++L G P+E T VL + L L G +E +
Sbjct: 375 LVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDL-------GIRLHEIAI 427
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
K+GL+S V+ +N + +Y++ + +++ + ++
Sbjct: 428 --------KTGLVSH-------------VIVSNSLIDMYSKCKCVDNALEVFRNISGKNV 466
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
VSW +I N E L F+ M+ + + P++ T +S+LSAC+++ L G +H
Sbjct: 467 VSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAH 525
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
+T + D F+ N ++DMY +CG ++ FN ++V W L++ G A+
Sbjct: 526 ALRTGV-GFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQGQAKL 583
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
A+E F +M L PD + I++L AC G+V EG+E F M Y + P + HY CVV
Sbjct: 584 AVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVV 643
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
D+L R G L +A I MP P+A IW L C+
Sbjct: 644 DILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACR 679
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 153/557 (27%), Positives = 272/557 (48%), Gaps = 47/557 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
M +R+V S+N ++ Y++ G ++AL ++ M+ P +TF +L +C ++ + G
Sbjct: 158 MSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARG 217
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ A V++ G F +D VG AL+ +Y + G + +F+ MP++ ++WN+++S + +
Sbjct: 218 KEIHAHVIRFG-FESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFE 276
Query: 119 HGFVEDCMFLFC---ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+G + + LF EL +T ++ L NE+ G +HG V+K+ F +
Sbjct: 277 NGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNER---LGRGVHGYVVKSEFGGD 333
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ + NSL+ MY + AE +F +E +DVVSW +I +L + KA+E Y M +
Sbjct: 334 ISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMEL 393
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ + P++ T V V+++CA + + LG +H IK L V V ++L+D Y+KC ++
Sbjct: 394 EGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDN 453
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
A F IS KN+VSW +LILG + L ++ +PN T VL +
Sbjct: 454 ALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVLSACARI 513
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L ++H +R G ++ +++ Y + G V ALN
Sbjct: 514 GALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCG------RKVPALN----------- 556
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
Q+N ++ D+ +WNI++ A G K +ELF M I+PD
Sbjct: 557 --------QFNS--------QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDE 600
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+SLL ACSK + G ++K ++ + ++D+ G+ G + +
Sbjct: 601 ITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQ 660
Query: 532 EMTDR-NVITWTALISA 547
+M R + W AL++A
Sbjct: 661 DMPIRPDAAIWGALLNA 677
>gi|302764012|ref|XP_002965427.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
gi|300166241|gb|EFJ32847.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
Length = 495
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 162/478 (33%), Positives = 249/478 (52%), Gaps = 32/478 (6%)
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V NSL+NMY +C G+ A + F+ + R+V+SW+T++ A A+ + +AL L+ +M +
Sbjct: 11 FVGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEE 70
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN+ TF+ V+++CA + G+ IH + L+ + VG+ALV Y KC L A
Sbjct: 71 GVEPNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVGLIVGTALVGMYGKCSRLIEA 130
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF 355
F I K++V+W+ +I YA L + L G RPNE
Sbjct: 131 RQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNE------------- 177
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGI 414
II M +LG+ ++ A G ++ L + V N + +
Sbjct: 178 --------IILMS------ILGACSSAGALAEGKMTHELVVICGFGAD--VSTGNTLIKM 221
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y + G + +ER D++SW+ ++A A +G K+ F+ M + PD TF
Sbjct: 222 YGKCGDLASAKAVFGGMERRDLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTF 281
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
VSLL ACS L L G+ +H I+ E S ++ N LIDMYGKCGS+ ++ IF+ M+
Sbjct: 282 VSLLDACSLLGALVEGNVIHTRIR-AEGFQSVMYIENSLIDMYGKCGSLQAARGIFDRMS 340
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
RNVITWT +I+A + + ALE F EME G +PD+VA ++++ +C H GLV EG
Sbjct: 341 HRNVITWTTMITACVQHEQGKEALELFEEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRI 400
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F +M P ++H+ ++DLL R G L EAE+++ MP P + W T L C+
Sbjct: 401 YFLKMVEDQSFTPGVEHFVGMLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLSACK 458
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 132/501 (26%), Positives = 244/501 (48%), Gaps = 49/501 (9%)
Query: 68 NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMF 127
GL C + FVG +LL +YG+ G ++E FE M +++++W+++V+ + + G + +
Sbjct: 4 TGLCCGE-FVGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALV 62
Query: 128 LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYF 187
LF ++ V E +F+ V+ +N + +E GE IH L + D L+V +LV MY
Sbjct: 63 LFQKMEEEGVEPNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVGLIVGTALVGMYG 122
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVY 247
+C+ + A ++F + +DVV+W+T+I A A+ + +A++L+ M++D V PN+ +
Sbjct: 123 KCSRLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMS 182
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
++ +C+ GK H V+ DV G+ L+ Y KC +L A F + ++
Sbjct: 183 ILGACSSAGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRD 242
Query: 308 IVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS-SLAFQLLQ---LHC 362
++SW+A++ A F+ + L G +P+ TF +L + SL L++ +H
Sbjct: 243 LISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGNVIHT 302
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
I G+++ Y+ SL+ Y K G + A GI++R N
Sbjct: 303 RIRAEGFQSVMYIENSLIDMYGKCGSLQAA-------------------RGIFDRMSHRN 343
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
+++W +I AC + KE LELF+ M A + PD F+S++ +CS
Sbjct: 344 -------------VITWTTMITACVQHEQGKEALELFEEMEKAGVQPDQVAFLSIIHSCS 390
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNM-----LIDMYGKCGSIGSSVKIFNEM-TDR 536
G G I +++ +F + ++D+ G+ G + + ++ M +
Sbjct: 391 H-----SGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDLLGRSGKLNEAEELMEFMPVEP 445
Query: 537 NVITWTALISALGLNGFAQRA 557
V+ W L+SA + +RA
Sbjct: 446 GVVGWNTLLSACKTHNDTERA 466
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 228/458 (49%), Gaps = 38/458 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M RNV+S++++++AY++ G + AL +F M G EP + TF +L +C + VE
Sbjct: 36 MTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEGVEPNEVTFLSVLDACANAEAVEQG 95
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ + VGTAL+G+YG+ L E VF+ + K +VTW++++S + +
Sbjct: 96 EMIHRLAARKKLDVGLIVGTALVGMYGKCSRLIEARQVFDGIVEKDVVTWSTMISAYAQL 155
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G V + + LF + V E + ++ S+ L G+ H LV+ GF ++
Sbjct: 156 GHVREAIQLFGYMNLDGVRPNEIILMSILGACSSAGALAEGKMTHELVVICGFGADVSTG 215
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L+ MY +C + SA+ +F +E RD++SW+ ++ +AE + A + RM ++ V
Sbjct: 216 NTLIKMYGKCGDLASAKAVFGGMERRDLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVK 275
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ TFV ++++C+ L + G IH ++ + +++ ++L+D Y KC +L+ A
Sbjct: 276 PDYVTFVSLLDACSLLGALVEGNVIHTRIRAEGFQSVMYIENSLIDMYGKCGSLQAARGI 335
Query: 300 FSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F +S++N+++W +I + ++ L E+ + G +P++ F
Sbjct: 336 FDRMSHRNVITWTTMITACVQHEQGKEALELFEEMEKAGVQPDQVAFL------------ 383
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA-NIIAGIYN- 416
S++ S + SGL+ + + + ++ P G+ +
Sbjct: 384 -------------------SIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDL 424
Query: 417 --RTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
R+G+ NE +L+ + P +V WN +++AC + D
Sbjct: 425 LGRSGKLNEAEELMEFMPVEPGVVGWNTLLSACKTHND 462
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 182/670 (27%), Positives = 330/670 (49%), Gaps = 64/670 (9%)
Query: 32 MINRGFEPTQFTFGGLL----SCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGR 87
+IN G F LL SC +L+ ++L++ + + ++ Y +
Sbjct: 51 LINVGLASVVFLQNTLLHAYLSCGALSDAR------NLLRDEITEPNVITHNIMMNGYAK 104
Query: 88 HGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS------------ 135
G L + V +F MP + + +WN+I+S + + G + + +F + ++
Sbjct: 105 LGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGC 164
Query: 136 -----------EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDY--------- 174
EVAL +G++ ++ D + + ++++ G D+
Sbjct: 165 VMKSCGALGWHEVAL---QLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIK 221
Query: 175 --ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
++ NS++ Y + G+ A ++FK + RDVVSWN +I AL++S +AL++ +
Sbjct: 222 NPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVD 281
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M V P+ TT+ + +CA L + GK +H +VI+N D +V SA+V+ YAKC
Sbjct: 282 MHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGC 341
Query: 293 LEGAHLCFSEISNKNIVSWNALILG---YASKSSPTSIF--LLIELLQLGYRPNEFTFSH 347
+ A FS + ++N VSW LI G Y S +F + EL+ + ++F +
Sbjct: 342 FKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAV----DQFALAT 397
Query: 348 VLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
++ + QLH L ++ G+ V SL++ YAK G + +A + R
Sbjct: 398 LISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNA-ELIFNFMAER 456
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+V + Y++ G + + + ++++WN ++ A +G ++ L+++ M
Sbjct: 457 DIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDML 516
Query: 464 AAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ + PD T+V+L C+ + LG + G K +I DT V N +I MY KCG
Sbjct: 517 TEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLIL-DTSVVNAVITMYSKCGR 575
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
I + K F+ ++ +++++W A+I+ +G ++A+E F ++ G KPD ++ +AVL+
Sbjct: 576 ISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSG 635
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H GLV EG F+ M R + + P ++H+ C+VDLL R GHL EA+ +I MP P A
Sbjct: 636 CSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAE 695
Query: 643 IWRTFLEGCQ 652
+W L C+
Sbjct: 696 VWGALLSACK 705
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 156/625 (24%), Positives = 285/625 (45%), Gaps = 72/625 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLL-SCDSLNPVEG 58
MP R+V S+N+I+S Y + G +AL +F+ M G P FTFG ++ SC +L E
Sbjct: 118 MPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEV 177
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCL--------------------------- 91
A +L D V TAL+ + R G +
Sbjct: 178 ALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAK 237
Query: 92 ----DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGV 147
D + +F+ MP + +V+WN ++S K G V + + + ++ V +++
Sbjct: 238 SHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSS 297
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
+ + LE+G+Q+H VI+N + VA+++V +Y +C A+++F + R+
Sbjct: 298 LTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNS 357
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
VSW +IG + F +++EL+ +M +++ +Q +I+ C + LG +H+
Sbjct: 358 VSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSL 417
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY--------- 318
+K+ V V ++L+ YAKC NL+ A L F+ ++ ++IVSW +I Y
Sbjct: 418 CLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKA 477
Query: 319 -------ASKSSPTSIFLLIELLQLGYRPNEFT-FSHVLRSSLAFQLLQLHCLIIRMGYE 370
++++ T +L +Q G + +S +L + + R +
Sbjct: 478 REFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCAD 537
Query: 371 NYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
LG + + K GLI D +VV N + +Y++ G+ +E K
Sbjct: 538 IGANKLGDQIIGHTVKVGLILDT-----------SVV--NAVITMYSKCGRISEARKAFD 584
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
L R D+VSWN +I + +G K+ +E+F + PD ++V++LS CS +
Sbjct: 585 FLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEE 644
Query: 490 GSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI-TWTALIS 546
G ++K+ IS + F C ++D+ G+ G + + + +EM + W AL+S
Sbjct: 645 GKFYFDMMKRDHNISPGLEHFSC--MVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLS 702
Query: 547 AL---GLNGFAQRALEKFREMEFLG 568
A G N A+ A + +++ G
Sbjct: 703 ACKTHGNNDLAELAAKHLFDLDSPG 727
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 240/522 (45%), Gaps = 84/522 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
MP+R+VVS+N +ISA S+ G V +AL M + M +G P T+ L +C L+ +E G
Sbjct: 251 MPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWG 310
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL V++N L D +V +A++ LY + GC E VF + ++ V+W ++ F +
Sbjct: 311 KQLHVQVIRN-LPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQ 369
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + LF ++ +A+ + + +I G N D+ G Q+H L +K+G ++V
Sbjct: 370 YGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVV 429
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY-------- 230
+NSL++MY +C + +AE +F + RD+VSW +I A ++ N KA E +
Sbjct: 430 SNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNV 489
Query: 231 -------------------LRMSVDI-----VFPNQTTFVYVINSCAGLQNSILGKSIHA 266
L+M D+ V P+ T+V + CA + + LG I
Sbjct: 490 ITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIG 549
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPT 325
+K L D V +A++ Y+KC + A F +S K++VSWNA+I GY+
Sbjct: 550 HTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQ 609
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAK 385
+I + ++L G +P+ ++ VL + +
Sbjct: 610 AIEIFDDILNKGAKPDYISYVAVL-------------------------------SGCSH 638
Query: 386 SGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWN 440
SGL+ + + + + P + + + R G E L+ ++ +P W
Sbjct: 639 SGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWG 698
Query: 441 IVIAACAHNGD-------YKEVLELFK-----YMRAARIYPD 470
+++AC +G+ K + +L YM A++Y D
Sbjct: 699 ALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYAD 740
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 148/325 (45%), Gaps = 39/325 (12%)
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
LH +I +G + ++ +L+ +Y G +SDA + V+ NI+ Y + G
Sbjct: 47 LHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPNVITHNIMMNGYAKLG 106
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR-AARIYPDNYTFVSLL 478
++ V+L ++ D+ SWN +++ +G + L++F MR P+ +TF ++
Sbjct: 107 SLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVM 166
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS---------------- 522
+C L + L GL+ K + D V L+DM +CG+
Sbjct: 167 KSCGALGWHEVALQLLGLLSKFD-SQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTI 225
Query: 523 ---------------IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
+ +++IF M +R+V++W +ISAL +G + AL+ +M
Sbjct: 226 ICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGK 285
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHL 625
G +PD + LTAC + G +L ++ R+ P +D Y +V+L + G
Sbjct: 286 GVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNL---PHIDPYVASAMVELYAKCGCF 342
Query: 626 KEAEKIITTMPFPPNALIWRTFLEG 650
KEA+++ +++ N++ W + G
Sbjct: 343 KEAKRVFSSLR-DRNSVSWTVLIGG 366
>gi|297796453|ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311946|gb|EFH42370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 182/688 (26%), Positives = 335/688 (48%), Gaps = 48/688 (6%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNGL 70
+S+ + G +++AL + M R +G +L + G Q+ A +LKNG
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGD 101
Query: 71 FCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
F A + ++ T L+ Y + LD +F + +++ +W +I+ + + G E + F
Sbjct: 102 FYAKNEYIETKLVIFYAKCDALDIAEVLFTKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
E++ +E+ V Q FG +HG V+K G + + VA+SL +MY +C
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYGKC 221
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A K+F ++ R+VV+WN ++ ++ +A+ L+ M + V P + T +
Sbjct: 222 GVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCL 281
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
++ A + GK HA I N LE D +G++L++FY K +E A + F + +K++V
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMIDKDVV 341
Query: 310 SWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL----HCLI 364
+WN +I GY + + + +L++L + + T + ++ ++ Q L+L C
Sbjct: 342 TWNLIISGYVQQGLVENAIYMCQLMRLEKLKYDCVTLATLMSAAARTQNLKLGKEVQCYC 401
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
IR +E+ + ++M YAK G I DA + + ++ N + Y +G E
Sbjct: 402 IRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TAEKDLILWNTLLAAYAESGLSGEG 460
Query: 425 VKLL--SQLE--RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL--- 477
++L QLE P++++WN++I + NG+ E ++F M+++ I+P+ ++ ++
Sbjct: 461 LRLFYGMQLEGVPPNVITWNLIILSLLRNGEVDEAKDMFLQMQSSGIFPNLISWTTMMNG 520
Query: 478 --------------------------------LSACSKLCNLALGSSLHGLIKKTEIISS 505
LSAC+ L +L G S+HG I + SS
Sbjct: 521 MVQNGCSEEAILFLRKMQESGLRPNAVSITVALSACANLASLHFGRSIHGYIIRNLQHSS 580
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
+ L+DMY KCG I + K+F + + A+ISA L G + A+ +R +E
Sbjct: 581 SVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLYNAMISAYALYGNLKEAIALYRSLE 640
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
+G KPD + + VL+AC H G + E+ M +G+ P ++HY +VDLL G
Sbjct: 641 GVGLKPDNITITNVLSACNHAGDNNQATEIVTEMVSKHGMNPCLEHYGLMVDLLASAGQT 700
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQR 653
+A ++I MP+ P+A + ++ + C +
Sbjct: 701 DKALRLIEEMPYKPDARMIQSLVASCNK 728
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/542 (26%), Positives = 262/542 (48%), Gaps = 74/542 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPV-EG 58
+P+RNVV++N+++ Y + G E+A+R+F M G EPT+ T LS + + V EG
Sbjct: 234 IPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMGGVEEG 293
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q A + NGL D +GT+LL Y + G ++ VF+ M K +VTWN I+S + +
Sbjct: 294 KQSHAIAIVNGLEL-DNILGTSLLNFYCKVGLIEYAEMVFDRMIDKDVVTWNLIISGYVQ 352
Query: 119 HGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G VE+ +++ C+L+R E + + ++ + Q+L+ G+++ I++ F+ +++
Sbjct: 353 QGLVENAIYM-CQLMRLEKLKYDCVTLATLMSAAARTQNLKLGKEVQCYCIRHSFESDIV 411
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+A+++++MY +C I A+K+F +D++ WNT++ A AES G+ L L+ M ++
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDSTAEKDLILWNTLLAAYAESGLSGEGLRLFYGMQLEG 471
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN T+ +I S L+N G+ AK D+F+ +
Sbjct: 472 VPPNVITWNLIILSL--LRN---GEVDEAK--------DMFLQMQSSGIFP--------- 509
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
N++SW ++ G S +I L ++ + G RPN + + L S
Sbjct: 510 ---------NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAVSITVAL--SACAN 558
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L LH G + Y++ +L S ++++I ++V +Y
Sbjct: 559 LASLH-----FGRSIHGYIIRNLQHS--------------SSVSIETSLVD------MYA 593
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G N+ K+ ++ +N +I+A A G+ KE + L++ + + PDN T +
Sbjct: 594 KCGDINKAEKVFGSKLYSELPLYNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITN 653
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTF-VC----NMLIDMYGKCGSIGSSVKIFN 531
+LSAC+ G + TE++S C +++D+ G ++++
Sbjct: 654 VLSACNH-----AGDNNQATEIVTEMVSKHGMNPCLEHYGLMVDLLASAGQTDKALRLIE 708
Query: 532 EM 533
EM
Sbjct: 709 EM 710
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 177/611 (28%), Positives = 299/611 (48%), Gaps = 35/611 (5%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
+ F+ + L+ LY VF+ +K WNSI+ +G + ++
Sbjct: 63 NVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSIIKSHFSNGNYFKAFDFYIQMR 122
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELLVANSLVNMYFQCAGI 192
+ + ++ + LE G+ IHGLV K+G F V +S V MY +C +
Sbjct: 123 YDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAENSAVGSSFVYMYAKCGVM 182
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL---RMSVDIVFPNQTTFVYVI 249
A MF ++ +RDVVSW ++ +++ K LE R+ D N T
Sbjct: 183 EDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEGGF 242
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
+C L I G+ +H +K L C V S+L+ Y+KC N+E AH F ++ +K++
Sbjct: 243 QACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDVF 302
Query: 310 SWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVL----RSSLAFQLLQLHCLI 364
SW ++I A L +Q+ P+ S +L S + + H LI
Sbjct: 303 SWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGNSMMVREGKAFHGLI 362
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDA-----------------------LAFVTALNI 401
+R Y + V +L++ Y K G ++ A ++ ++
Sbjct: 363 VRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVHEWSKESWNTMVFGYVHCYIIKNSV 422
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
V AN + +Y + G + K+ + +R D+V+WN +I++ H+G Y E + LF
Sbjct: 423 DEDVSIANSLIDMYGKGGNLSIAWKMFCRTQR-DVVTWNTLISSYTHSGHYAEAITLFDE 481
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M + ++ P++ T V +LSAC L +L G +H IK+ + + L+DMY KCG
Sbjct: 482 MISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEGGF-ELNVSLGTALVDMYAKCG 540
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ S ++FN M +++VI+W +IS GL+G A A+E F++ME KP+ + +++L+
Sbjct: 541 QLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPNAITFLSLLS 600
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC H G V EG +LF+RM + Y ++P + H+ C+ DLL R G+L+EAE ++ +MP P+
Sbjct: 601 ACTHAGYVDEGKQLFDRM-QYYSIKPNLKHFACMADLLGRSGNLQEAEDLVQSMPICPDG 659
Query: 642 LIWRTFLEGCQ 652
+W T L C+
Sbjct: 660 GVWGTLLSACK 670
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 145/557 (26%), Positives = 238/557 (42%), Gaps = 85/557 (15%)
Query: 151 LSNE-QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
LSN+ Q L+ + H L+I G + +++ L+++Y S+ +F +D
Sbjct: 38 LSNQTQTLQSLHKSHALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFL 97
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
WN+II + + N+ KA + Y++M D PNQ T ++ +CA L GK IH V
Sbjct: 98 WNSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVS 157
Query: 270 KNALECD-VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSI 327
K+ L + VGS+ V YAKC +E A L F EI +++VSW AL++GY + S +
Sbjct: 158 KSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGL 217
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
L E+ ++G E S L FQ LG+++ +G
Sbjct: 218 ECLCEMRRIG-GDGEKVNSRTLEG--GFQACG---------------NLGAMI-----AG 254
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
LA T L + VV +++++ +Y++ G E Q+ D+ SW VI CA
Sbjct: 255 RCLHGLAVKTGLGCSQ-VVQSSLLS-MYSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCA 312
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
G E L LF M+ +YPD +L + G + HGLI + + DT
Sbjct: 313 RFGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDT 372
Query: 508 FVCNMLIDMYGKCGSIGSSVKIF-----------------------------------NE 532
V N L+ MY K G++ + K+F N
Sbjct: 373 -VNNALLSMYCKFGTLNPAEKLFDGVHEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANS 431
Query: 533 MTD-------------------RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+ D R+V+TW LIS+ +G A+ F EM P+
Sbjct: 432 LIDMYGKGGNLSIAWKMFCRTQRDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNS 491
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
L+ VL+AC H + +G ++ + + G E + +VD+ + G L+++ ++
Sbjct: 492 ATLVIVLSACCHLPSLEKG-KMVHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFN 550
Query: 634 TMPFPPNALIWRTFLEG 650
+M + + W + G
Sbjct: 551 SMK-EKDVISWNVMISG 566
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 186/411 (45%), Gaps = 67/411 (16%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF----GGLLSCDSLNP-VEG 58
R+VVS+ +++ Y E L M G + + GG +C +L + G
Sbjct: 195 RDVVSWTALVIGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAG 254
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L +K GL C+ V ++LL +Y + G ++E + F + K + +W S++ + +
Sbjct: 255 RCLHGLAVKTGLGCSQV-VQSSLLSMYSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCAR 313
Query: 119 HGFVEDCMFLFCE-----------------------------------LVRSEVAL---- 139
GF+ +C+ LF + +VR L
Sbjct: 314 FGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTV 373
Query: 140 ----------------TESSFVGVIHGLSNE--QDLEFGEQIHGLVIKNGFDYELLVANS 181
E F GV H S E + FG +H +IKN D ++ +ANS
Sbjct: 374 NNALLSMYCKFGTLNPAEKLFDGV-HEWSKESWNTMVFG-YVHCYIIKNSVDEDVSIANS 431
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L++MY + + A KMF + RDVV+WNT+I + S ++ +A+ L+ M + + PN
Sbjct: 432 LIDMYGKGGNLSIAWKMFCRTQ-RDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPN 490
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
T V V+++C L + GK +H + + E +V +G+ALVD YAKC LE + F+
Sbjct: 491 SATLVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFN 550
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRS 351
+ K+++SWN +I GY S + + + Q +PN TF +L +
Sbjct: 551 SMKEKDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPNAITFLSLLSA 601
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQ 62
R+VV++N++IS+Y+ G+ +A+ +F MI+ P T +LS C L +E ++
Sbjct: 454 RDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMV 513
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+K G F + +GTAL+ +Y + G L++ +F M K +++WN ++S +G HG
Sbjct: 514 HQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDA 573
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI 163
M +F ++ +S V +F+ ++ ++ ++ G+Q+
Sbjct: 574 NSAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQL 614
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 164/546 (30%), Positives = 272/546 (49%), Gaps = 38/546 (6%)
Query: 112 IVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG 171
+V F K G +C F EL+R + VI + ++L+ G IH +V K G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
D + V +LV+MY +C I A +F ++ RD+V+W +IG AE ++L L+
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
+M + V P++ V V+ +CA L + I + + + DV +G+A++D YAKC
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLR 350
+E A F + KN++SW+A+I Y ++ L +L G P++ T + +L
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240
Query: 351 SSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+ + LQ+ H ++ + G + +V +L+ Y K I DA
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARF------------ 288
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
L ++ D+V+W ++I A G+ E L LF MR
Sbjct: 289 --------------------LFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEG 328
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
+ PD V+++ AC+KL + ++ I++ + D + +IDM+ KCG + S+
Sbjct: 329 VVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKF-QLDVILGTAMIDMHAKCGCVESA 387
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
+IF+ M ++NVI+W+A+I+A G +G ++AL+ F M G P+++ L+++L AC H
Sbjct: 388 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHA 447
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
GLV EG+ F M Y V ++ HY CVVDLL R G L EA K+I +M + +W
Sbjct: 448 GLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGA 507
Query: 647 FLEGCQ 652
FL C+
Sbjct: 508 FLGACR 513
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 223/458 (48%), Gaps = 38/458 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M +R++V++ +I Y+ CG ++L +F M G P + ++ +C L + A
Sbjct: 91 MQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKA 150
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ ++ F D +GTA++ +Y + GC++ +F+ M K++++W+++++ +G H
Sbjct: 151 RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH 210
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + LF ++ S + + + +++ S+ ++L+ G IH +V K G D + V
Sbjct: 211 GQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVC 270
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+LV+MY +C I A +F + RD+V+W +IG AE N ++L L+ +M + V
Sbjct: 271 AALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 330
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P++ V V+ +CA L ++I + + + DV +G+A++D +AKC +E A
Sbjct: 331 PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 390
Query: 300 FSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F + KN++SW+A+I Y ++ L +L+ G PN+ T
Sbjct: 391 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKIT-------------- 436
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL----NIPRAVVPANIIAGI 414
L SL+ + + +GL+ + L F + + ++ V + +
Sbjct: 437 -----------------LVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDL 479
Query: 415 YNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
R G+ +E +KL+ + D W + AC + D
Sbjct: 480 LGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKD 517
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 121/539 (22%), Positives = 254/539 (47%), Gaps = 31/539 (5%)
Query: 12 IISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQASVLKNGL 70
++ +++ G + F +I G P +T ++ +C L ++ +L ++
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFC 130
D FV AL+ +Y + +++ +F+ M + LVTW ++ + + G + + LF
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
++ V + + V V+ + + I + + F ++++ ++++MY +C
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
+ SA ++F +E ++V+SW+ +I A KAL+L+ M + P++ T ++
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+C+ L+N +G+ IH V K L+ D FV +ALVD Y KC +E A F ++ +++V+
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVT 300
Query: 311 WNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGY 369
W +I GYA ++ S+ L ++ + G P++ V+ +
Sbjct: 301 WTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAK--------------- 345
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
LG++ K+ I D ++ V+ + ++ + G ++
Sbjct: 346 ------LGAM----HKARTIDD---YIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFD 392
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
++E +++SW+ +IAA ++G ++ L+LF M + I P+ T VSLL ACS +
Sbjct: 393 RMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEE 452
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISA 547
G L+ + + +D ++D+ G+ G + ++K+ MT +++ W A + A
Sbjct: 453 GLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 511
>gi|255553249|ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543299|gb|EEF44831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 165/531 (31%), Positives = 269/531 (50%), Gaps = 50/531 (9%)
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
KHGFV+ ++V L S F ++ + L +IH +IK F YE+
Sbjct: 3 KHGFVK-------KIVGDLSFLDSSPFAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVF 55
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL-------------------- 217
+ N L++ Y +C A K+F + ++V SWN I+ L
Sbjct: 56 IQNRLIDAYGKCGCFDDARKIFDQMPEKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPD 115
Query: 218 -----------AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
A+ + F +AL +++M N+ TF +++CAGL++ +G IH
Sbjct: 116 QCSWNSLIAGFAQHDRFEEALNYFVKMHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHG 175
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPT 325
++K+ DV++GSAL+D Y+KC ++ A F + +N+VSWN+LI Y S
Sbjct: 176 LMLKSQFLLDVYMGSALIDIYSKCGFVDCAQRVFDGMMERNVVSWNSLITCYEQNGPSRE 235
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRS----SLAFQLLQLHCLIIRMGYENYEYVLG-SLM 380
++ + + +++ G+ P+E T + V+ + + A Q L++H +++ + +L +L+
Sbjct: 236 ALEIFMRMMESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALV 295
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
YAK G I++A + I V ++++G Y +T L +++ ++VSWN
Sbjct: 296 DMYAKCGRINEARCVFDRMPIRNVVSETSMVSG-YAKTASVKAARLLFTKMIERNVVSWN 354
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
+IA NG+ +E L LF+ ++ I P +YTF +LL+AC+ L +L LG H + K
Sbjct: 355 ALIAGYTQNGENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHAHVLKH 414
Query: 501 EII-----SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
SD FV N LIDMY KCGS+ +IF M +R+ ++W A+I NG+
Sbjct: 415 GFRFQYGEESDVFVGNALIDMYMKCGSVEEGCRIFENMVERDYVSWNAMIVGYAQNGYGM 474
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
AL FR+M G KPD V +I L AC H GLV+EG + F M YG+E
Sbjct: 475 EALGLFRKMLASGEKPDHVTMIGALCACSHAGLVQEGRKHFSSMTEEYGLE 525
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 132/491 (26%), Positives = 224/491 (45%), Gaps = 95/491 (19%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ A ++K F + F+ L+ YG+ GC D+ +F+ MP K++ +WN+IVS K
Sbjct: 40 RIHARIIKTQ-FAYEVFIQNRLIDAYGKCGCFDDARKIFDQMPEKNVFSWNAIVSTLVKS 98
Query: 120 GFV-------------------------------EDCMFLFCELVRSEVALTESSFVGVI 148
GF+ E+ + F ++ R L E +F +
Sbjct: 99 GFLDEGARLFVSMPEPDQCSWNSLIAGFAQHDRFEEALNYFVKMHRKGFVLNEYTFGSGL 158
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
+ +DL+ G QIHGL++K+ F ++ + ++L+++Y +C + A+++F + R+VV
Sbjct: 159 SACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSALIDIYSKCGFVDCAQRVFDGMMERNVV 218
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SWN++I ++ +ALE+++RM P++ T V+++CA L + G IHA V
Sbjct: 219 SWNSLITCYEQNGPSREALEIFMRMMESGFEPDEVTLASVVSACASLAAAKQGLEIHACV 278
Query: 269 IK-NALECDVFVGSALVDFYAKCDNL-------------------------------EGA 296
+K + L D+ + +ALVD YAKC + + A
Sbjct: 279 VKRDKLRDDLILSNALVDMYAKCGRINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAA 338
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF 355
L F+++ +N+VSWNALI GY L +L+ P +TF ++L +
Sbjct: 339 RLLFTKMIERNVVSWNALIAGYTQNGENEEALRLFRMLKREAICPTHYTFGNLLNACANL 398
Query: 356 QLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
LQL H +++ G+ ++Y G SD V N +
Sbjct: 399 ADLQLGRQAHAHVLKHGFR-FQY------------GEESD-------------VFVGNAL 432
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y + G E ++ + D VSWN +I A NG E L LF+ M A+ PD+
Sbjct: 433 IDMYMKCGSVEEGCRIFENMVERDYVSWNAMIVGYAQNGYGMEALGLFRKMLASGEKPDH 492
Query: 472 YTFVSLLSACS 482
T + L ACS
Sbjct: 493 VTMIGALCACS 503
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 201/385 (52%), Gaps = 42/385 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
MP+ + S+NS+I+ +++ E+AL F+ M +GF ++TFG GL +C L ++ G
Sbjct: 111 MPEPDQCSWNSLIAGFAQHDRFEEALNYFVKMHRKGFVLNEYTFGSGLSACAGLKDLKIG 170
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +LK+ F D ++G+AL+ +Y + G +D VF+ M +++V+WNS+++ + +
Sbjct: 171 TQIHGLMLKSQ-FLLDVYMGSALIDIYSKCGFVDCAQRVFDGMMERNVVSWNSLITCYEQ 229
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELL 177
+G + + +F ++ S E + V+ ++ + G +IH V+K + +L+
Sbjct: 230 NGPSREALEIFMRMMESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLI 289
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEI-------------------------------RD 206
++N+LV+MY +C I A +F + I R+
Sbjct: 290 LSNALVDMYAKCGRINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERN 349
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
VVSWN +I ++ +AL L+ + + + P TF ++N+CA L + LG+ HA
Sbjct: 350 VVSWNALIAGYTQNGENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLGRQAHA 409
Query: 267 KVIKNAL------ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
V+K+ E DVFVG+AL+D Y KC ++E F + ++ VSWNA+I+GYA
Sbjct: 410 HVLKHGFRFQYGEESDVFVGNALIDMYMKCGSVEEGCRIFENMVERDYVSWNAMIVGYAQ 469
Query: 321 KS-SPTSIFLLIELLQLGYRPNEFT 344
++ L ++L G +P+ T
Sbjct: 470 NGYGMEALGLFRKMLASGEKPDHVT 494
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 155/296 (52%), Gaps = 6/296 (2%)
Query: 345 FSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
F+ +L S L + L+ +H II+ + ++ L+ +Y K G DA +
Sbjct: 22 FAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRLIDAYGKCGCFDDARKIFDQMP 81
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
+ V N I ++G +E +L + PD SWN +IA A + ++E L F
Sbjct: 82 -EKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWNSLIAGFAQHDRFEEALNYFV 140
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M + YTF S LSAC+ L +L +G+ +HGL+ K++ + D ++ + LID+Y KC
Sbjct: 141 KMHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFL-LDVYMGSALIDIYSKC 199
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
G + + ++F+ M +RNV++W +LI+ NG ++ ALE F M GF+PD V L +V+
Sbjct: 200 GFVDCAQRVFDGMMERNVVSWNSLITCYEQNGPSREALEIFMRMMESGFEPDEVTLASVV 259
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+AC ++G+E+ + + + ++ + +VD+ + G + EA + MP
Sbjct: 260 SACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRINEARCVFDRMP 315
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 194/478 (40%), Gaps = 116/478 (24%)
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D+ F + + F +++SC ++ + IHA++IK +VF+ + L+D Y KC +
Sbjct: 13 DLSFLDSSPFAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRLIDAYGKCGCFDD 72
Query: 296 AHLCFSEISNKNIVSWNA-------------------------------LILGYASKSS- 323
A F ++ KN+ SWNA LI G+A
Sbjct: 73 ARKIFDQMPEKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWNSLIAGFAQHDRF 132
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSL 379
++ +++ + G+ NE+TF L + + L Q+H L+++ + L
Sbjct: 133 EEALNYFVKMHRKGFVLNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQF---------L 183
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+ Y S LI IY++ G + ++ + ++VSW
Sbjct: 184 LDVYMGSALID-----------------------IYSKCGFVDCAQRVFDGMMERNVVSW 220
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
N +I NG +E LE+F M + PD T S++SAC+ L G +H + K
Sbjct: 221 NSLITCYEQNGPSREALEIFMRMMESGFEPDEVTLASVVSACASLAAAKQGLEIHACVVK 280
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIG---------------------------SSVK---- 528
+ + D + N L+DMY KCG I +SVK
Sbjct: 281 RDKLRDDLILSNALVDMYAKCGRINEARCVFDRMPIRNVVSETSMVSGYAKTASVKAARL 340
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC----- 583
+F +M +RNV++W ALI+ NG + AL FR ++ P +L AC
Sbjct: 341 LFTKMIERNVVSWNALIAGYTQNGENEEALRLFRMLKREAICPTHYTFGNLLNACANLAD 400
Query: 584 ------RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
H +++ G YG E ++ + ++D+ ++ G ++E +I M
Sbjct: 401 LQLGRQAHAHVLKHGFRF------QYGEESDVFVGNALIDMYMKCGSVEEGCRIFENM 452
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 98/169 (57%), Gaps = 7/169 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M +RNVVS+N++I+ Y++ G E+ALR+F + PT +TFG LL +C +L ++ G
Sbjct: 345 MIERNVVSWNALIAGYTQNGENEEALRLFRMLKREAICPTHYTFGNLLNACANLADLQLG 404
Query: 59 AQLQASVLKNGLFC-----ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
Q A VLK+G +D FVG AL+ +Y + G ++E +FE+M + V+WN+++
Sbjct: 405 RQAHAHVLKHGFRFQYGEESDVFVGNALIDMYMKCGSVEEGCRIFENMVERDYVSWNAMI 464
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ 162
+ ++G+ + + LF +++ S + +G + S+ ++ G +
Sbjct: 465 VGYAQNGYGMEALGLFRKMLASGEKPDHVTMIGALCACSHAGLVQEGRK 513
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 166/603 (27%), Positives = 291/603 (48%), Gaps = 39/603 (6%)
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
+P+ G L +LK G D F LL Y + L + +F++MP+ + +++ ++
Sbjct: 50 DPIAGKHLHCHILKRGT-SLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLA 108
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
+ + + + + + F ++ L + +H V K G
Sbjct: 109 QGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHH 168
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ V +L++ Y + A +F D+ +D+VSW ++ AE+ + ++L+L+ +M
Sbjct: 169 ADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQM 228
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ PN T + SC GL+ +GKS+H +K + D+FVG AL++ YAK +
Sbjct: 229 RIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEI 288
Query: 294 EGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLR-- 350
A F E+ +++ W+ +I YA S S ++ L + + Q PN FTF+ VL+
Sbjct: 289 IDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQAC 348
Query: 351 -SSLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
SS++ L Q+H +++ G + +V ++M YAK
Sbjct: 349 ASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAK----------------------- 385
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
G+ ++KL +L + V+WN +I GD + + LF +M +
Sbjct: 386 ---------CGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQ 436
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P T+ S+L A + L L G +H L KT + + DT V N LIDMY KCG I +
Sbjct: 437 PTEVTYSSVLRASASLAALEPGLQIHSLTIKT-MYNKDTVVANSLIDMYAKCGRINDARL 495
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
F++M R+ ++W A+I ++G + AL F M+ KP+++ + VL+AC + GL
Sbjct: 496 TFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGL 555
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ +G FE M++ Y ++P ++HY C+V LL R G EA K+I + + P+ ++WR L
Sbjct: 556 LYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALL 615
Query: 649 EGC 651
C
Sbjct: 616 GAC 618
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 169/560 (30%), Positives = 271/560 (48%), Gaps = 51/560 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP N +SF ++ YSR AL L + G E F F LL L ++ A
Sbjct: 96 MPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKL--LVSMDLAH 153
Query: 61 ----LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
L A V K G ADAFVGTAL+ Y G +D VF+D+ K +V+W +V+ +
Sbjct: 154 LCWTLHACVYKLGHH-ADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACY 212
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ F E+ + LF ++ + G + + G+ +HG +K +D++L
Sbjct: 213 AENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDL 272
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V +L+ +Y + I A+++F+++ D++ W+ +I A+S+ +AL+L+LRM
Sbjct: 273 FVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQT 332
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN TF V+ +CA + LGK IH+ V+K L +VFV +A++D YAKC +E +
Sbjct: 333 SVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENS 392
Query: 297 HLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F E+ ++N V+WN +I+GY ++ L +L+ +P E T+S VLR+S +
Sbjct: 393 MKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASL 452
Query: 356 QL----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANI 410
LQ+H L I+ Y V SL+ YAK G I+DA L F
Sbjct: 453 AALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTF--------------- 497
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
++ + D VSWN +I + +G E L LF M+ P+
Sbjct: 498 ------------------DKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPN 539
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVK 528
TFV +LSACS L G + + K I + + C ++ + G+ G ++K
Sbjct: 540 KLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTC--MVWLLGRLGRFDEAMK 597
Query: 529 IFNEMT-DRNVITWTALISA 547
+ E+ +V+ W AL+ A
Sbjct: 598 LIGEIAYQPSVMVWRALLGA 617
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 143/541 (26%), Positives = 251/541 (46%), Gaps = 46/541 (8%)
Query: 138 ALTESSFVGVIHGL-SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
AL S+ ++ + N D G+ +H ++K G +L N L+N Y Q + A
Sbjct: 31 ALDSHSYAHMLQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDAS 90
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
K+F ++ + +S+ T+ + F +AL LR+ + N F ++ +
Sbjct: 91 KLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMD 150
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ L ++HA V K D FVG+AL+D Y+ N++ A F +I K++VSW ++
Sbjct: 151 LAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVA 210
Query: 317 GYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYEN 371
YA S+ L ++ +GY+PN FT S L+S L + +H ++ Y++
Sbjct: 211 CYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDH 270
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
+V +L+ YAKSG I DA +L ++
Sbjct: 271 DLFVGIALLELYAKSGEIIDA--------------------------------QRLFEEM 298
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
+ D++ W+++IA A + KE L+LF MR + P+N+TF S+L AC+ +L LG
Sbjct: 299 PKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGK 358
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H + K ++S+ FV N ++D+Y KCG I +S+K+F E+ DRN +TW +I
Sbjct: 359 QIHSCVLKFG-LNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQL 417
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS-YGVEPEMD 610
G +RA+ F M +P V +VL A + G+++ ++ Y + +
Sbjct: 418 GDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVV- 476
Query: 611 HYHCVVDLLVRYGHLKEAEKIITTM----PFPPNALIWRTFLEGCQRCRIAKYDTLNSTK 666
+ ++D+ + G + +A M NA+I + G + +D + T
Sbjct: 477 -ANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTD 535
Query: 667 C 667
C
Sbjct: 536 C 536
>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 159/499 (31%), Positives = 262/499 (52%), Gaps = 37/499 (7%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
G Q+H +IK GFD + + ++LV+MY +C + SA+++F ++ R+VV+WN++I
Sbjct: 98 GIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLH 157
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
A+EL+L M + P + V+ C ++++ LG +H +K ++ V
Sbjct: 158 VGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVV 217
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGY 338
G+ L+D Y+K N++ + L F + +NI++W +++ GYA P + +L+ +Q LG
Sbjct: 218 GTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGI 277
Query: 339 RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
R N T++ +L S + L Q+HC IIR G E+ Y+ +L+T Y++
Sbjct: 278 RLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSECS------- 330
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
+ + K+ S + R D +SWN VI ++ G+ +
Sbjct: 331 -----------------------SSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEA 367
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
L+ F MR A I D +TF S+L A + L G +H L+ K S+ V N L+
Sbjct: 368 ALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGY-GSNLNVQNGLV 426
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
MY +CGSI + ++F+ M +VI+W +L+S +G+ + A+E F +M G KPD
Sbjct: 427 SMYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNT 486
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVE-PEMDHYHCVVDLLVRYGHLKEAEKIIT 633
+ VL+ACRH GL+ +G+E F+ M Y +E P +HY +VDL R G+L EAE I
Sbjct: 487 TFLVVLSACRHVGLLDKGLEYFDLMRNDYSLESPTTEHYSSMVDLFSRAGYLSEAEDFIN 546
Query: 634 TMPFPPNALIWRTFLEGCQ 652
TMP P +++ L CQ
Sbjct: 547 TMPIEPGPSVYKALLSACQ 565
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 149/577 (25%), Positives = 285/577 (49%), Gaps = 47/577 (8%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGA 59
P + S NS I+ + L++ + G PT ++S C V G
Sbjct: 40 PGNDFFSCNSHIACDTDEKQSSVDLKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGI 99
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
QL ++++K G F ++ ++ +AL+ +YG+ G + +F++MP +++VTWNS++S +
Sbjct: 100 QLHSTIIKVG-FDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHV 158
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G E + LF E+V+ + T S V+ G +D + G Q+HGL +K GF Y ++V
Sbjct: 159 GCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVG 218
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
L+++Y + I ++ MF + R++++W +++ A + A+ L M +
Sbjct: 219 TCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIR 278
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC--DNLEGAH 297
N T+ +++S + + K +H ++I+ LE + ++ LV Y++C +LE +
Sbjct: 279 LNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFN 338
Query: 298 LCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
S ++ + +SWNA+I G ++ + ++ ++ Q G + FTF+ VLR+
Sbjct: 339 KVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMIS 398
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L Q+H L+++ GY + V L++ YA+ G I+DA
Sbjct: 399 TLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDA-------------------- 438
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
++ S ++R D++SWN +++ CA++G +E +ELF+ MR + + PDN
Sbjct: 439 ------------KRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNT 486
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV-CNMLIDMYGKCGSIGSSVKIFN 531
TF+ +LSAC + L G L++ + S T + ++D++ + G + + N
Sbjct: 487 TFLVVLSACRHVGLLDKGLEYFDLMRNDYSLESPTTEHYSSMVDLFSRAGYLSEAEDFIN 546
Query: 532 EMT-DRNVITWTALISALGLNG---FAQRALEKFREM 564
M + + AL+SA ++G A R +K +M
Sbjct: 547 TMPIEPGPSVYKALLSACQVHGNVEIAVRCAKKLLQM 583
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 208/416 (50%), Gaps = 20/416 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGG-LLSCDSLNPVE-G 58
MP RNVV++NS+IS Y G E A+ +FL M+ G +PT F+ L+ C + + G
Sbjct: 140 MPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLG 199
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K G FC + VGT L+ LY + +D +F+ MP ++++TW S+V+ +
Sbjct: 200 IQVHGLSMKCG-FCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAH 258
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
M L ++ R + L ++ ++ S+ DL+ +Q+H +I+ G + +
Sbjct: 259 CQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYL 318
Query: 179 ANSLVNMYFQC--AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+LV +Y +C + + K+ V D +SWN +IG L+ N AL+ + +M
Sbjct: 319 EVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQA 378
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ + TF V+ + + GK IHA V+K ++ V + LV YA+C ++ A
Sbjct: 379 GIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDA 438
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
FS + +++SWN+L+ G A ++ L ++ + G +P+ TF VL +
Sbjct: 439 KRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSACRHV 498
Query: 356 QLLQL---HCLIIRMGY-------ENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
LL + ++R Y E+Y S++ ++++G +S+A F+ + I
Sbjct: 499 GLLDKGLEYFDLMRNDYSLESPTTEHYS----SMVDLFSRAGYLSEAEDFINTMPI 550
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
D S N IA L+L ++ P + ++S+C+K ++ +G LH
Sbjct: 43 DFFSCNSHIACDTDEKQSSVDLKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLH 102
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
I K S+ ++C+ L+DMYGKCG++ S+ ++F+EM RNV+TW +LIS G
Sbjct: 103 STIIKVG-FDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCP 161
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHC 614
+ A+E F EM +G P ++ AVL C + G+++ ++ G + C
Sbjct: 162 EIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQV-HGLSMKCGFCYNIVVGTC 220
Query: 615 VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
++DL + ++ + + MP N + W + + G C+
Sbjct: 221 LIDLYSKGWNIDASRLMFDLMP-ERNIITWTSMVAGYAHCQ 260
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 174/580 (30%), Positives = 293/580 (50%), Gaps = 45/580 (7%)
Query: 85 YGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
Y + G + +F+ M +S++++N ++S +G GF + LF E + + L + S+
Sbjct: 54 YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSY 113
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
GV+ +D G+ IHGL I G ++ + N L++MY +C I A +F+ +
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDE 173
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC-AGLQNSI-LGK 262
D VSWN++I A + + L+L ++M + N T + SC L N + GK
Sbjct: 174 LDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGK 233
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY---- 318
++H +K L+ D+ VG+AL+D YAK L A F N+N+V +NA+I G+
Sbjct: 234 TLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTE 293
Query: 319 --ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLR---SSLAFQL-LQLHCLIIRMGYENY 372
+ + ++ L ++ + G +P++FTFS +++ AF+ Q+H I + ++
Sbjct: 294 DIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSD 353
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
E++ +L+ Y+ G D L +N T KL
Sbjct: 354 EFIGSTLIELYSLLGSTEDQLKC-------------------------FNSTPKL----- 383
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
DIVSW +IA A NG ++ L LF + A+ PD + ++LSAC+ + G
Sbjct: 384 --DIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQ 441
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+HG KT I + V N I MY K G++ S+ F E+ + +V++W+ +I + +G
Sbjct: 442 VHGYAVKTGI-GTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHG 500
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY 612
A+ A+ F M+ G P+++ + VLTAC HGGLV EG+ +E M + Y ++ + H
Sbjct: 501 HAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHC 560
Query: 613 HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
C+VDLL R G L +A+ I F + ++WRT L GC+
Sbjct: 561 TCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCR 600
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 136/562 (24%), Positives = 265/562 (47%), Gaps = 48/562 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M +R+V+S+N +IS Y G+ A+ +F + +F++ G+LS C + G
Sbjct: 70 MSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALG 129
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + GL F+ L+ +Y + +D +FE V+WNS+++ + +
Sbjct: 130 KVIHGLAIVCGL-GQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYAR 188
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHG--LSNEQDLEFGEQIHGLVIKNGFDYEL 176
G E+ + L ++ + + L + + L+ + +G+ +HG +K G D ++
Sbjct: 189 VGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDI 248
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-----ALELYL 231
+V +L++MY + + A ++F+ ++VV +N +I ++E+ K AL+L+
Sbjct: 249 VVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFS 308
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
+M + P+ TF +I C ++ GK IHA + K+ ++ D F+GS L++ Y+
Sbjct: 309 QMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLG 368
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLR 350
+ E CF+ +IVSW +I GYA +++ L ELL G +P+EF + +L
Sbjct: 369 STEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLS 428
Query: 351 S----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+ + Q+H ++ G V S ++ YAKSG N+ A +
Sbjct: 429 ACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSG------------NLDSAKI 476
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
+++ PD+VSW+++I + A +G K+ + LF+ M++
Sbjct: 477 T--------------------FEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYG 516
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
I+P+ TF+ +L+ACS + G + +KK + + C ++D+ + G + +
Sbjct: 517 IHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDA 576
Query: 527 VK-IFNEMTDRNVITWTALISA 547
I N + + W L+S
Sbjct: 577 KNFILNSGFGDHPVMWRTLLSG 598
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 193/668 (28%), Positives = 322/668 (48%), Gaps = 59/668 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMF--LYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQ 62
++ +N +++ SR G DAL + L + G P +FT L S +G Q+
Sbjct: 29 SLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALK--SCRGDDGRQVH 86
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG--KHG 120
A K GL D FVG +L+ +YGR G +D+ VFE M ++LV+WN++++ + G
Sbjct: 87 AVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRG 146
Query: 121 F--VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
DC+ E + A E++ V V+ + E G +HGL +K+G+D V
Sbjct: 147 LELFRDCL----EDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRV 202
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEI---RDVVSWNTIIGALAESENFGKALELYLRMSV 235
+N LV+MY +C + AE F + R+VVSWN ++G A + G A L M +
Sbjct: 203 SNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQM 262
Query: 236 DI--VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE-CDVFVGSALVDFYAKCDN 292
+ V ++ T + V+ C+GL + +HA V++ L V +AL+ Y +C
Sbjct: 263 EERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGC 322
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ--LGYRPNEFTFSHVLR 350
L A F I +K + SWNALI +A ++ L + G +P+ F+ +L
Sbjct: 323 LLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLL 382
Query: 351 SSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+ + L H I+R G E ++ SL++ Y + G ++LA V
Sbjct: 383 ACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCG--RESLARV---------- 430
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
L +E D VSWN +IA + NG E L+LF+ M++ +
Sbjct: 431 --------------------LFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKK 470
Query: 467 --IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+P S L ACS+L + LG +H K ++ D+F+ + +IDMY KCGS+
Sbjct: 471 GGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCE-DSFLSSSIIDMYSKCGSVD 529
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
+ F+ + ++ ++WT +I+ +NG + A+ + +M G +PD + +L AC
Sbjct: 530 DARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACG 589
Query: 585 HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
H G++ +G+ F+ M +E +++HY CV+ +L R G +A ++ MP P+A I
Sbjct: 590 HAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKIL 649
Query: 645 RTFLEGCQ 652
+ L C
Sbjct: 650 SSVLSACH 657
>gi|225459473|ref|XP_002284396.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Vitis vinifera]
Length = 690
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 302/638 (47%), Gaps = 80/638 (12%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G L A ++K G+F D F LL +Y L + +F++ +++ TW +++S +
Sbjct: 22 GRSLHAHIIKLGVF-NDVFFANNLLAMYVDISLLKDARRLFDETLERNVATWTTMISAYS 80
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFV--GVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
G + + + +++ S+ + T + F+ V+ DLE G+ IHG V + ++
Sbjct: 81 SSGRPDTALKFYVQMLESK-SETPNGFLYSAVLKACGLVGDLESGKLIHGRVFRANLGFD 139
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-S 234
++ N+L++MY +C + SA K+F D+ SWNT+I + +A+ L+ +M
Sbjct: 140 TVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLMEEAVNLFYQMPE 199
Query: 235 VDIVFPNQT-----------------------------TFVYVINSCAGLQNSILGKSIH 265
D V N TF + +C Q ++ K IH
Sbjct: 200 PDTVSWNSIIAGFGCKESLGALRFVCMMHRKGLKLDGFTFSCALKTCGCFQLLVMVKQIH 259
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS--NKNIVS----WNALILGYA 319
V K+ F SALVD Y+ C+ L+ A F E S + +I+ WN+++ GY
Sbjct: 260 CYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCCSASILDCLPLWNSMLSGYV 319
Query: 320 -SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ----LLQLHCLIIRMGYENYEY 374
++ + +I L+ ++ LG + FTF L+ + Q LQ+ L + GYE +Y
Sbjct: 320 VNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFRLGLQVQGLAVTSGYE-LDY 378
Query: 375 VLGSLMTS-YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
V+GS++ YA G I DAL +L +L
Sbjct: 379 VVGSILIDLYANDGKIKDAL--------------------------------RLFYRLPE 406
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
DIV W+ +I+ C G V LF+ M I D + S+L ACS L L G +
Sbjct: 407 KDIVVWSSLISWCTKMGLNSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQV 466
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H K+ S+ LID+Y KCG I + +F ++R+ + +T +I G NG
Sbjct: 467 HSFCVKSGY-ESERITVTSLIDLYAKCGEIEDGLALFYCTSERDTVCYTGIIMGCGQNGR 525
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
A A+ F+EM LG KP+ + + VL+ACRH GLV E +F+ M Y +EP ++HY+
Sbjct: 526 AMEAVGFFQEMIELGLKPNEITFLGVLSACRHAGLVEEAWTIFKYMKTEYKMEPHIEHYY 585
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
C+V+LL + G KEAE++I MPF P+ IW + L C
Sbjct: 586 CIVELLSQAGCFKEAEELIAEMPFEPDQTIWNSLLGAC 623
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 142/529 (26%), Positives = 240/529 (45%), Gaps = 54/529 (10%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLL-SCDSLNPVEGAQ 60
+RNV ++ ++ISAYS G + AL+ ++ M+ E P F + +L +C + +E +
Sbjct: 66 ERNVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGK 125
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L + D + LL +Y + G L VF+D+ S +WN+++S +GK G
Sbjct: 126 LIHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEG 185
Query: 121 FVEDCMFLFCELVRSEV--------------ALTESSFVGVIH--GLSNE---------- 154
+E+ + LF ++ + +L FV ++H GL +
Sbjct: 186 LMEEAVNLFYQMPEPDTVSWNSIIAGFGCKESLGALRFVCMMHRKGLKLDGFTFSCALKT 245
Query: 155 ----QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKD-----VEIR 205
Q L +QIH V K+GF A++LV+ Y C + A KMF + I
Sbjct: 246 CGCFQLLVMVKQIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCCSASIL 305
Query: 206 DVVS-WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
D + WN+++ +E A+ L ++ + TF + C LQN LG +
Sbjct: 306 DCLPLWNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFRLGLQV 365
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
+ + E D VGS L+D YA ++ A F + K+IV W++LI + +K
Sbjct: 366 QGLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLI-SWCTKMGL 424
Query: 325 TSIF--LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGS 378
S+ L +++ L ++F S VL++ + L Q+H ++ GYE+ + S
Sbjct: 425 NSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITVTS 484
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL----ERP 434
L+ YAK G I D LA + V II G + G+ E V ++ +P
Sbjct: 485 LIDLYAKCGEIEDGLALFYCTSERDTVCYTGIIMGC-GQNGRAMEAVGFFQEMIELGLKP 543
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAA-RIYP---DNYTFVSLLS 479
+ +++ V++AC H G +E +FKYM+ ++ P Y V LLS
Sbjct: 544 NEITFLGVLSACRHAGLVEEAWTIFKYMKTEYKMEPHIEHYYCIVELLS 592
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 214/491 (43%), Gaps = 45/491 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLN-PVEG 58
MP+ + VS+NSII+ + C ALR M +G + FTF L +C V
Sbjct: 197 MPEPDTVSWNSIIAGFG-CKESLGALRFVCMMHRKGLKLDGFTFSCALKTCGCFQLLVMV 255
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS------LVTWNSI 112
Q+ V K+G F + F +AL+ Y LDE + +F++ S L WNS+
Sbjct: 256 KQIHCYVNKSG-FGSCCFTASALVDSYSNCNELDEAIKMFDEYSCCSASILDCLPLWNSM 314
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+S + + + L ++ + +F + N Q+ G Q+ GL + +G+
Sbjct: 315 LSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFRLGLQVQGLAVTSGY 374
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ + +V + L+++Y I A ++F + +D+V W+++I + L+
Sbjct: 375 ELDYVVGSILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGLNSLVFSLFRD 434
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M + +Q V+ +C+ L GK +H+ +K+ E + ++L+D YAKC
Sbjct: 435 MVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITVTSLIDLYAKCGE 494
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS 351
+E F S ++ V + +I+G ++ E+++LG +PNE TF VL +
Sbjct: 495 IEDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPNEITFLGVLSA 554
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L++ I + Y EY + + Y I
Sbjct: 555 CRHAGLVEEAWTIFK--YMKTEYKMEPHIEHYY-------------------------CI 587
Query: 412 AGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYM--RAARIY 468
+ ++ G + E +L++++ PD WN ++ AC G +K+ EL ++ R
Sbjct: 588 VELLSQAGCFKEAEELIAEMPFEPDQTIWNSLLGAC---GTHKKT-ELVNFIAERLLTTL 643
Query: 469 PDNYTFVSLLS 479
P++ + + LS
Sbjct: 644 PEDPSILVTLS 654
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 6/183 (3%)
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D + VS++ C + G SLH I K + +D F N L+ MY + + ++
Sbjct: 2 DLHRIVSVIRQCGRFRAFRHGRSLHAHIIKLGVF-NDVFFANNLLAMYVDISLLKDARRL 60
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGL 588
F+E +RNV TWT +ISA +G AL+ + +M E P+ AVL AC G
Sbjct: 61 FDETLERNVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGD 120
Query: 589 VREGMELFERMNRS-YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
+ G + R+ R+ G + + + ++D+ V+ G L A K+ + P++ W T
Sbjct: 121 LESGKLIHGRVFRANLGFDTVL--MNTLLDMYVKCGSLSSARKVFDDI-LCPSSTSWNTM 177
Query: 648 LEG 650
+ G
Sbjct: 178 ISG 180
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 169/585 (28%), Positives = 287/585 (49%), Gaps = 45/585 (7%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES--SF 144
+ G + +F+ MP +++VTW ++ + ++ ++ LF ++ RS +F
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE--LLVANSLVNMYFQCAGIWSAEKMFKDV 202
++ G ++ Q+H +K GFD L V+N L+ Y + + A +F+++
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
+D V++NT+I + + +++ L+L+M P+ TF V+ + GL + LG+
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQ 270
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
+HA + D VG+ ++DFY+K D + + F E+ + VS+N +I Y+
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQAD 330
Query: 323 S-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLG 377
S+ E+ +G+ F F+ +L + LQ LHC + ++ +V
Sbjct: 331 QYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGN 390
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
SL+ YAK + + E + L + V
Sbjct: 391 SLVDMYAKCEM--------------------------------FEEAELIFKSLPQRTTV 418
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SW +I+ G + L+LF MR + + D TF ++L A + +L LG LH I
Sbjct: 419 SWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFI 478
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
++ + + F + L+DMY KCGSI +V++F EM DRN ++W ALISA NG + A
Sbjct: 479 IRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAA 537
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
+ F +M G +PD V+++ VLTAC H G V +G E F+ M+ YG+ P+ HY C++D
Sbjct: 538 IGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLD 597
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYDTL 662
LL R G EAEK++ MPF P+ ++W + L CRI K +L
Sbjct: 598 LLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA---CRIHKNQSL 639
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 155/589 (26%), Positives = 280/589 (47%), Gaps = 62/589 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG--FEPTQFTFGGLLS-CDSLNPVE 57
MPDR VV++ ++ Y+R + ++A ++F M P TF LL C+ P
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 58 G-AQLQASVLKNGLFCADAF--VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
Q+ A +K G F + F V LL Y LD +FE++P K VT+N++++
Sbjct: 165 AVGQVHAFAVKLG-FDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLIT 223
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ K G + + LF ++ +S ++ +F GV+ + D G+Q+H L + GF
Sbjct: 224 GYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSR 283
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ V N +++ Y + + +F ++ D VS+N +I + ++++ + +L + M
Sbjct: 284 DASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQ 343
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
F +++ A L + +G+ +H + + + + VG++LVD YAKC+ E
Sbjct: 344 CMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFE 403
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A L F + + VSW ALI GY K + L ++ R ++ TF+ VL++S
Sbjct: 404 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 463
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+F L QLH IIR G N E V ++ SGL+
Sbjct: 464 SFASLLLGKQLHAFIIRSG--NLENV-------FSGSGLVD------------------- 495
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+Y + G + V++ ++ + VSWN +I+A A NGD + + F M + + P
Sbjct: 496 ----MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Query: 470 DNYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
D+ + + +L+ACS + G S ++G+ K + + C ++D+ G+ G
Sbjct: 552 DSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKK-----HYAC--MLDLLGRNGR 604
Query: 523 IGSSVKIFNEMT-DRNVITWTALISALGLN---GFAQRALEKFREMEFL 567
+ K+ +EM + + I W+++++A ++ A+RA EK ME L
Sbjct: 605 FAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKL 653
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 221/480 (46%), Gaps = 44/480 (9%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM--SVDI 237
N++++ + + + SA +F + R VV+W ++G A + +F +A +L+ +M S
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 238 VFPNQTTFVYVINSC--AGLQNSILGKSIHAKVIKNALECDVF--VGSALVDFYAKCDNL 293
P+ TF ++ C A QN++ +HA +K + + F V + L+ Y + L
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAV--GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSS 352
+ A + F EI K+ V++N LI GY T SI L +++ Q G++P++FTFS VL++
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ +++ LG + AL+ T + R N I
Sbjct: 261 VGL----------------HDFALGQQL----------HALSVTTGFS--RDASVGNQIL 292
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
Y++ + ET L ++ D VS+N+VI++ + Y+ L F+ M+ N+
Sbjct: 293 DFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNF 352
Query: 473 TFVSLLSACSKLCNLALGSSLH--GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
F ++LS + L +L +G LH L+ + I V N L+DMY KC + IF
Sbjct: 353 PFATMLSIAANLSSLQMGRQLHCQALLATADSI---LHVGNSLVDMYAKCEMFEEAELIF 409
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ R ++WTALIS G L+ F +M + D+ VL A +
Sbjct: 410 KSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL 469
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G +L + RS +E +VD+ + G +K+A ++ MP NA+ W +
Sbjct: 470 LGKQLHAFIIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 527
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 4/222 (1%)
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
II+ G++ ++ + G +S A + V +I+G + +TG +
Sbjct: 39 IIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISG-HVKTGDVSS 97
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM--RAARIYPDNYTFVSLLSAC 481
L + +V+W I++ A N + E +LF+ M ++ PD+ TF +LL C
Sbjct: 98 ARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTF-VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
+ +H K ++ V N+L+ Y + + + +F E+ +++ +T
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT 217
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ LI+ +G ++ F +M G +P VL A
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
E+ +T N +I + K G + S+ +F+ M DR V+TWT L+ N A +
Sbjct: 73 EMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKL 132
Query: 561 FREM--EFLGFKPDRVALIAVLTAC 583
FR+M PD V +L C
Sbjct: 133 FRQMCRSSSCTLPDHVTFTTLLPGC 157
>gi|302771309|ref|XP_002969073.1| hypothetical protein SELMODRAFT_90996 [Selaginella moellendorffii]
gi|300163578|gb|EFJ30189.1| hypothetical protein SELMODRAFT_90996 [Selaginella moellendorffii]
Length = 810
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 185/676 (27%), Positives = 331/676 (48%), Gaps = 52/676 (7%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQA 63
NVVS+ S+I AY+ G +A++++ M P ++T + +C++L E +++
Sbjct: 127 NVVSWTSMIRAYALSGQNREAVKLYKAM---DVTPNEYTLASIAEACENLE--EAREIET 181
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+ G A V A++G++ + G LD+ K++ WN +++ +
Sbjct: 182 RAVDGGFGSVRA-VALAIVGMFCKLGSLDDARRYLIRHDAKNVFCWNQLIAAQARSSSSS 240
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
M L+ E+ R+ E V + L D + G ++H V+++GF+ + +V+++LV
Sbjct: 241 TAMDLYREMRRNHG--VEPDCVTYLELLKVCSDWKLGRELHASVLEHGFEQDEVVSSALV 298
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
M+ +CA +A K+F +E ++VVSW T+I A A+S+ +A+EL+ M ++ V P++
Sbjct: 299 TMHGRCAMPDAARKIFASIERKNVVSWTTMIAAYAQSDRSDEAMELFHAMDLEGVRPSEQ 358
Query: 244 TFVYVINSCAGLQNS-------ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
TFV V+++ A +S +S+ + + + L D +G+A+VD Y K + A
Sbjct: 359 TFVSVVHALASSSSSRDELAALAAARSLEERALGSGLGIDGVLGNAMVDLYGKRRRPDEA 418
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + +++ V+W A+I YA F L +++ P TF VL +
Sbjct: 419 RGVFDAMRSRSTVAWTAMIQAYAQSGRREEAFALFREMEI--EPAATTFVSVLEACAGSS 476
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L ++H ++ G E+ +V +L+ + K G + A + + + +VP N +
Sbjct: 477 DLDAGREVHSAVVSRGLESEVFVGTALIDMFGKCGDCNAARSSFERI-ADKTIVPWNAML 535
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR----IY 468
+Y + G+ + ++LL+ H G K + A R +
Sbjct: 536 AVYVQNGRPRDALELLN------------------HGGTVNGRGGTVKLVNATRGTGGVT 577
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD TFV LL+AC L +A+G +LH E++ + + N L+ MY CGS+ +
Sbjct: 578 PDKITFVLLLNACGALGEIAVGRALHRDAIPGELLGESSCIGNALVAMYASCGSLEEARV 637
Query: 529 IFNEMTDRNVITWTAL---ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
F + +++ +W A+ ++ALG + ++E F EME GF D +L +L+ C H
Sbjct: 638 AFRGIQRKSLASWNAMAGAVAALGGSRSWSASMELFSEMELQGFNADEASLAGILSGCSH 697
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GL +G +F M+ +GV HY C+VD+L R G L EAE ++ MP+ P + W
Sbjct: 698 AGLKHQGWRIFVSMSDDFGVPCSAVHYVCIVDMLGRLGQLDEAESLLGCMPYQPGLVGWM 757
Query: 646 TFLEGCQR----CRIA 657
T L C + CR A
Sbjct: 758 TLLGACGKHGDVCRGA 773
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 217/480 (45%), Gaps = 63/480 (13%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGL---LSCDSLNPVEGA- 59
+NVVS+ ++I+AY++ ++A+ +F M G P++ TF + L+ S + E A
Sbjct: 320 KNVVSWTTMIAAYAQSDRSDEAMELFHAMDLEGVRPSEQTFVSVVHALASSSSSRDELAA 379
Query: 60 -----QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
L+ L +GL D +G A++ LYG+ DE VF+ M +S V W +++
Sbjct: 380 LAAARSLEERALGSGLGI-DGVLGNAMVDLYGKRRRPDEARGVFDAMRSRSTVAWTAMIQ 438
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + G E+ LF E+ E+ ++FV V+ + DL+ G ++H V+ G +
Sbjct: 439 AYAQSGRREEAFALFREM---EIEPAATTFVSVLEACAGSSDLDAGREVHSAVVSRGLES 495
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY---- 230
E+ V +L++M+ +C +A F+ + + +V WN ++ ++ ALEL
Sbjct: 496 EVFVGTALIDMFGKCGDCNAARSSFERIADKTIVPWNAMLAVYVQNGRPRDALELLNHGG 555
Query: 231 -------------LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
V P++ TFV ++N+C L +G+++H I L +
Sbjct: 556 TVNGRGGTVKLVNATRGTGGVTPDKITFVLLLNACGALGEIAVGRALHRDAIPGELLGES 615
Query: 278 F-VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA----SKSSPTSIFLLIE 332
+G+ALV YA C +LE A + F I K++ SWNA+ A S+S S+ L E
Sbjct: 616 SCIGNALVAMYASCGSLEEARVAFRGIQRKSLASWNAMAGAVAALGGSRSWSASMELFSE 675
Query: 333 LLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
+ G+ +E + + +L H + G+ +
Sbjct: 676 MELQGFNADEASLAGILSGCS-------HAGLKHQGWRIF-------------------- 708
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
++ +P + V I + R GQ +E LL + +P +V W ++ AC +GD
Sbjct: 709 VSMSDDFGVPCSAVHYVCIVDMLGRLGQLDEAESLLGCMPYQPGLVGWMTLLGACGKHGD 768
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/544 (24%), Positives = 225/544 (41%), Gaps = 101/544 (18%)
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
+ +DL G+ +H + +G + +AN L+ MY +C + +A+ +F+ + R+V SWN
Sbjct: 41 ARSRDLSRGKSLHRQITGSGMGSDRFLANLLMEMYGKCQDVGNADAVFRSMGDRNVFSWN 100
Query: 212 TIIGALAESENFGKALELYLRMSVD-----------------------------IVFPNQ 242
II A A++ + KAL L+ M ++ V PN+
Sbjct: 101 IIIAANAQTGHGKKALHLFREMDLEGNVVSWTSMIRAYALSGQNREAVKLYKAMDVTPNE 160
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T + +C L+ + + I + + V A+V + K +L+ A
Sbjct: 161 YTLASIAEACENLEEA---REIETRAVDGGFGSVRAVALAIVGMFCKLGSLDDARRYLIR 217
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLIELLQL--GYRPNEFTFSHVLRSSLAFQL-LQ 359
KN+ WN LI A SS ++ L ++ G P+ T+ +L+ ++L +
Sbjct: 218 HDAKNVFCWNQLIAAQARSSSSSTAMDLYREMRRNHGVEPDCVTYLELLKVCSDWKLGRE 277
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
LH ++ G+E E V +L+T ++ R
Sbjct: 278 LHASVLEHGFEQDEVVSSALVT--------------------------------MHGRCA 305
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+ K+ + +ER ++VSW +IAA A + E +ELF M + P TFVS++
Sbjct: 306 MPDAARKIFASIERKNVVSWTTMIAAYAQSDRSDEAMELFHAMDLEGVRPSEQTFVSVVH 365
Query: 480 ACS----------------KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
A + L ALGS L D + N ++D+YGK
Sbjct: 366 ALASSSSSRDELAALAAARSLEERALGSGL----------GIDGVLGNAMVDLYGKRRRP 415
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ +F+ M R+ + WTA+I A +G + A FREME +P ++VL AC
Sbjct: 416 DEARGVFDAMRSRSTVAWTAMIQAYAQSGRREEAFALFREME---IEPAATTFVSVLEAC 472
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA----EKIITTMPFPP 639
+ G E+ + S G+E E+ ++D+ + G A E+I P
Sbjct: 473 AGSSDLDAGREVHSAVV-SRGLESEVFVGTALIDMFGKCGDCNAARSSFERIADKTIVPW 531
Query: 640 NALI 643
NA++
Sbjct: 532 NAML 535
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 159/338 (47%), Gaps = 12/338 (3%)
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+ CA ++ GKS+H ++ + + D F+ + L++ Y KC ++ A F + ++N+
Sbjct: 37 LRECARSRDLSRGKSLHRQITGSGMGSDRFLANLLMEMYGKCQDVGNADAVFRSMGDRNV 96
Query: 309 VSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQLLQLHCLIIRM 367
SWN +I A L + L N +++ ++R+ +L+ Q + L M
Sbjct: 97 FSWNIIIAANAQTGHGKKALHLFREMDL--EGNVVSWTSMIRAYALSGQNREAVKLYKAM 154
Query: 368 GYENYEYVLGSLMTSYA--KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
EY L S+ + + + A RAV A I G++ + G ++
Sbjct: 155 DVTPNEYTLASIAEACENLEEAREIETRAVDGGFGSVRAVALA--IVGMFCKLGSLDDAR 212
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKL 484
+ L + + ++ WN +IAA A + ++L++ MR + PD T++ LL CS
Sbjct: 213 RYLIRHDAKNVFCWNQLIAAQARSSSSSTAMDLYREMRRNHGVEPDCVTYLELLKVCS-- 270
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
+ LG LH + + D V + L+ M+G+C ++ KIF + +NV++WT +
Sbjct: 271 -DWKLGRELHASVLE-HGFEQDEVVSSALVTMHGRCAMPDAARKIFASIERKNVVSWTTM 328
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
I+A + + A+E F M+ G +P ++V+ A
Sbjct: 329 IAAYAQSDRSDEAMELFHAMDLEGVRPSEQTFVSVVHA 366
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 145/286 (50%), Gaps = 37/286 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M R+ V++ ++I AY++ G E+A +F M EP TF +L +C + ++ G
Sbjct: 425 MRSRSTVAWTAMIQAYAQSGRREEAFALFREME---IEPAATTFVSVLEACAGSSDLDAG 481
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ ++V+ GL ++ FVGTAL+ ++G+ G + S FE + K++V WN++++++ +
Sbjct: 482 REVHSAVVSRGLE-SEVFVGTALIDMFGKCGDCNAARSSFERIADKTIVPWNAMLAVYVQ 540
Query: 119 HGFVEDCMFLF------------CELVRSE-----VALTESSFVGVIHGLSNEQDLEFGE 161
+G D + L +LV + V + +FV +++ ++ G
Sbjct: 541 NGRPRDALELLNHGGTVNGRGGTVKLVNATRGTGGVTPDKITFVLLLNACGALGEIAVGR 600
Query: 162 QIHGLVIKNGFDYELL-----VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
+H ++ ELL + N+LV MY C + A F+ ++ + + SWN + GA
Sbjct: 601 ALH----RDAIPGELLGESSCIGNALVAMYASCGSLEEARVAFRGIQRKSLASWNAMAGA 656
Query: 217 LAE---SENFGKALELYLRMSVDIVFPNQTTFVYVINSC--AGLQN 257
+A S ++ ++EL+ M + ++ + +++ C AGL++
Sbjct: 657 VAALGGSRSWSASMELFSEMELQGFNADEASLAGILSGCSHAGLKH 702
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D L C++ +L+ G SLH I + + SD F+ N+L++MYGKC +G++ +
Sbjct: 29 DGGRLARSLRECARSRDLSRGKSLHRQITGSGM-GSDRFLANLLMEMYGKCQDVGNADAV 87
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F M DRNV +W +I+A G ++AL FREM+ G + V+ +++ A G
Sbjct: 88 FRSMGDRNVFSWNIIIAANAQTGHGKKALHLFREMDLEG---NVVSWTSMIRAYALSGQN 144
Query: 590 REGMELFERMN 600
RE ++L++ M+
Sbjct: 145 REAVKLYKAMD 155
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 189/666 (28%), Positives = 324/666 (48%), Gaps = 73/666 (10%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
N+++ AY CG + DA R+ I EP T +++ NG
Sbjct: 59 NTLLHAYLSCGALSDARRLLRADIK---EPNVITH-------------------NIMMNG 96
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK-HGFVEDCMFL 128
Y + G L + +F+ MPR+ + +WN+++S + G C L
Sbjct: 97 ---------------YAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGAL 141
Query: 129 FCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYE-----------L 176
C E+A +G+ D + + + ++ G+ D+ +
Sbjct: 142 GCR----ELA---PQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTI 194
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
NS++ Y + GI A + F+D+ RDVVSWN +I AL++S +AL L + M
Sbjct: 195 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 254
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V + TT+ + +CA L + GK +HAKVI++ + D +V SAL++ YAKC + + A
Sbjct: 255 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 314
Query: 297 HLCFSEISNKNIVSWNALILG---YASKSSPTSIF--LLIELLQLGYRPNEFTFSHVLRS 351
F+ + ++N VSW LI G Y S +F + EL+ + ++F + ++
Sbjct: 315 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI----DQFALATLISG 370
Query: 352 SLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
L QLH L ++ G+ V SL++ YAK G + +A FV + R +V
Sbjct: 371 CFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNA-EFVFSSMSERDIVS 429
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR- 466
+ Y++ G + + + + ++WN ++ A +G ++ L+++ M + +
Sbjct: 430 WTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKD 489
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
+ PD T+V+L C+ + LG + G K +I + V N I MY KCG I +
Sbjct: 490 VTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLIL-NVSVANAAITMYSKCGRISEA 548
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
K+F+ + ++V++W A+I+ +G ++A + F +M G KPD ++ +AVL+ C H
Sbjct: 549 QKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHS 608
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
GLV+EG F+ M R +G+ P ++H+ C+VDLL R GHL EA+ +I MP P A +W
Sbjct: 609 GLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGA 668
Query: 647 FLEGCQ 652
L C+
Sbjct: 669 LLSACK 674
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 232/522 (44%), Gaps = 84/522 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
M +R+VVS+N +I+A S+ G V +AL + + M +G T+ L +C L + G
Sbjct: 220 MAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWG 279
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A V+++ L D +V +AL+ LY + G E VF + ++ V+W ++ +
Sbjct: 280 KQLHAKVIRS-LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQ 338
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + LF ++ +A+ + + +I G N DL G Q+H L +K+G + ++V
Sbjct: 339 YECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVV 398
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY-------- 230
+NSL+++Y +C + +AE +F + RD+VSW ++I A ++ N KA E +
Sbjct: 399 SNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNA 458
Query: 231 -------------------LRM-----SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
L+M S V P+ T+V + CA + + LG I
Sbjct: 459 ITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG 518
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPT 325
+K L +V V +A + Y+KC + A F ++ K++VSWNA+I GY+
Sbjct: 519 HTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQ 578
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAK 385
+ ++L G +P+ ++ VL + +
Sbjct: 579 AAKTFDDMLSKGAKPDYISYVAVL-------------------------------SGCSH 607
Query: 386 SGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWN 440
SGL+ + + + + P + + + R G E L+ ++ +P W
Sbjct: 608 SGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWG 667
Query: 441 IVIAACAHNGD-------YKEVLEL-----FKYMRAARIYPD 470
+++AC +G+ K V EL YM A+IY D
Sbjct: 668 ALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSD 709
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/489 (22%), Positives = 208/489 (42%), Gaps = 80/489 (16%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK-DVEIRDVVSWNTIIGALAESE 221
+HG ++ G + + N+L++ Y C + A ++ + D++ +V++ N ++ A+
Sbjct: 42 LHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQG 101
Query: 222 NFGKALELYLRM------SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+ A EL+ RM S + + + + SC L L + K
Sbjct: 102 SLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWG 161
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEI-------------------------------S 304
D V +ALVD + +C ++ A FS+I +
Sbjct: 162 DPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMA 221
Query: 305 NKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQL---LQ 359
+++VSWN +I + S ++ L++E+ + G R + T++ L + + F L Q
Sbjct: 222 ERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQ 281
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
LH +IR + YV +L+ YAK G
Sbjct: 282 LHAKVIRSLPQIDPYVASALIELYAK--------------------------------CG 309
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+ E ++ + L+ + VSW ++I + + +ELF MRA + D + +L+S
Sbjct: 310 SFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 369
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
C +L LG LH L K+ + V N LI +Y KCG + ++ +F+ M++R+++
Sbjct: 370 GCFNRMDLCLGRQLHSLCLKSG-HNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIV 428
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+WT++I+A G +A E F M + + A+L A G +G++++ M
Sbjct: 429 SWTSMITAYSQIGNIIKAREFFDGMA----TRNAITWNAMLGAYIQHGAEEDGLKMYSAM 484
Query: 600 NRSYGVEPE 608
V P+
Sbjct: 485 LSQKDVTPD 493
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 136/303 (44%), Gaps = 21/303 (6%)
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
LH ++ +G + ++ +L+ +Y G +SDA + A V+ NI+ Y + G
Sbjct: 42 LHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQG 101
Query: 420 QYNETVKLLSQLERPDIVSWNIVIA----------ACAHNGDYKEVLELFKYMRAARIYP 469
++ +L ++ R D+ SWN +++ +C G + +L +
Sbjct: 102 SLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWG 161
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D +L+ + + S L I++ I F N ++ Y K I +++
Sbjct: 162 DPDVETALVDMFVRCGYVDFASRLFSQIERPTI-----FCRNSMLAGYAKLYGIDHAIEY 216
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F +M +R+V++W +I+AL +G + AL EM G + D + LTAC +
Sbjct: 217 FEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSL 276
Query: 590 REGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
G +L ++ RS P++D Y +++L + G KEA+++ ++ N++ W
Sbjct: 277 GWGKQLHAKVIRSL---PQIDPYVASALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVL 332
Query: 648 LEG 650
+ G
Sbjct: 333 IGG 335
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 189/659 (28%), Positives = 319/659 (48%), Gaps = 73/659 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP R+VV +N ++ AY G+ E+A+ + + G P + T LL+ S + + Q
Sbjct: 206 MPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLR-LLARISGDDSDAGQ 264
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+++ NG ++ SV E + R N +S + G
Sbjct: 265 VKS--FANG----------------------NDASSVSEIIFR------NKGLSEYLHSG 294
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ F ++V S+V + +F+ ++ L G+Q+H + +K G D L V+N
Sbjct: 295 QYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSN 354
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL+NMY + A +F ++ RD++SWN++I +A++ +A+ L++++ + P
Sbjct: 355 SLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKP 414
Query: 241 NQTTFVYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
+Q T V+ + + L + L K +H IK D FV +AL+D Y++ ++ A +
Sbjct: 415 DQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEIL 474
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRS-SLAF-- 355
F E N ++V+WNA++ GY L L+ + G R ++FT + V ++ F
Sbjct: 475 F-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAI 533
Query: 356 -QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIAG 413
Q Q+H I+ GY+ +V ++ Y K G +S A AF + +P
Sbjct: 534 NQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS--------IPV----- 580
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
PD V+W +I+ C NG+ + +F MR + PD +T
Sbjct: 581 --------------------PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT 620
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+L A S L L G +H K ++D FV L+DMY KCGSI + +F +
Sbjct: 621 IATLAKASSCLTALEQGRQIHANALKLN-CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRI 679
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
N+ W A++ L +G + L+ F++M+ LG KPD+V I VL+AC H GLV E
Sbjct: 680 EMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAY 739
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ M+ YG++PE++HY C+ D L R G +K+AE +I +M +A ++RT L C+
Sbjct: 740 KHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACR 798
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 137/602 (22%), Positives = 265/602 (44%), Gaps = 90/602 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGY-----VEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLN 54
MPDR++VS+NSI++AY++ ++ A +F + ++ T +L C
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLC---- 155
Query: 55 PVEGAQLQASVLKNGLFC-----ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
+ + AS +G C D FV AL+ +Y + G + E +FE+MP + +V W
Sbjct: 156 -LHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLW 214
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
N ++ + + GF E+ + L S + E + + ++ D Q+
Sbjct: 215 NLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSD---AGQVKSFA-- 269
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
NG D A+S+ + F+ G+ S + L+
Sbjct: 270 NGND-----ASSVSEIIFRNKGL----------------------SEYLHSGQYSALLKC 302
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
+ M V +Q TF+ ++ + + + LG+ +H +K L+ + V ++L++ Y K
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHV 348
A F +S ++++SWN++I G A ++ L ++LL+ G +P+++T + V
Sbjct: 363 LRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSV 422
Query: 349 LR--SSLAFQL---LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
L+ SSL L Q+H I++ + +V +L+ +Y+++ + +A
Sbjct: 423 LKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA----------- 471
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
++L + D+V+WN ++A + D + L+LF M
Sbjct: 472 ----------------------EILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
D++T ++ C L + G +H K+ D +V + ++DMY KCG +
Sbjct: 510 KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG-YDLDLWVSSGILDMYVKCGDM 568
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR--VALIAVLT 581
++ F+ + + + WT +IS NG +RA F +M +G PD +A +A +
Sbjct: 569 SAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKAS 628
Query: 582 AC 583
+C
Sbjct: 629 SC 630
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/556 (22%), Positives = 231/556 (41%), Gaps = 52/556 (9%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
+ G + DL G+ H ++ + E + N+L++MY +C + A ++F +
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 204 IRDVVSWNTIIGALAES-----ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
RD+VSWN+I+ A A+S EN +A L+ + D+V+ ++ T ++ C
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
+S H K L+ D FV ALV+ Y K ++ + F E+ +++V WN ++ Y
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 319 ASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLR-----------------------SSLA 354
+I L G PNE T + R S +
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEII 281
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR----------- 403
F+ L + Y ++ S + ++ L TA+ +
Sbjct: 282 FRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMA 341
Query: 404 -------AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
+ +N + +Y + ++ + + D++SWN VIA A NG E +
Sbjct: 342 LKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAV 401
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCN-LALGSSLHGLIKKTEIISSDTFVCNMLID 515
LF + + PD YT S+L A S L L+L +H K + SD+FV LID
Sbjct: 402 CLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNV-SDSFVSTALID 460
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
Y + + + +F E + +++ W A+++ + + L+ F M G + D
Sbjct: 461 AYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFT 519
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
L V C + +G ++ +S G + ++ ++D+ V+ G + A+ ++
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 636 PFPPNALIWRTFLEGC 651
P P + + W T + GC
Sbjct: 579 PVPDD-VAWTTMISGC 593
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 174/539 (32%), Positives = 263/539 (48%), Gaps = 51/539 (9%)
Query: 132 LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
++R VA +F + S D G IH I G +L V+ +L++MY +CA
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE--LYLRMSVDIVFPNQTTFVYVI 249
+ A +F + RD+V+WN ++ A + A+ L ++M + + PN +T V ++
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 250 NSCAGLQNSILGKSIHAKVI----------KNALECDVFVGSALVDFYAKCDNLEGAHLC 299
A G S+HA I K+ L V +G+AL+D YAKC +L A
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIE--LLQLGYRPNEFTFSHVLRSSLAFQL 357
F + +N V+W+ALI G+ S T FLL + L Q + + + LR+ +
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L QLH L+ + G SL++ YAK+GLI
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLI------------------------ 276
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++ + L ++ D VS++ +++ NG +E +FK M+A + PD T
Sbjct: 277 --------DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAAT 328
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
VSL+ ACS L L G HG + ++S+T +CN LIDMY KCG I S ++FN M
Sbjct: 329 MVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSICNALIDMYAKCGRIDLSRQVFNMM 387
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
R++++W +I+ G++G + A F EM LGF PD V I +L+AC H GLV EG
Sbjct: 388 PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGK 447
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M YG+ P M+HY C+VDLL R G L EA + I +MP + +W L C+
Sbjct: 448 HWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACR 506
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 130/540 (24%), Positives = 235/540 (43%), Gaps = 60/540 (11%)
Query: 32 MINRGFEPTQFTFG-GLLSCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
M+ P +TF L +C +L G + + GL AD FV TALL +Y +
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQ-ADLFVSTALLDMYVKCA 59
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM--FLFCELVRSEVALTESSFVGV 147
CL + +F MP + LV WN++++ + HG + L ++ + S+ V +
Sbjct: 60 CLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVAL 119
Query: 148 IHGLSNEQDLEFGEQIHGLVI----------KNGFDYELLVANSLVNMYFQCAGIWSAEK 197
+ L+ + L G +H I K+ +L+ +L++MY +C + A +
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQ 256
+F + R+ V+W+ +IG +A L+ M + + F + T+ + +CA L
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLD 239
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ +G+ +HA + K+ + D+ G++L+ YAK ++ A F E++ K+ VS++AL+
Sbjct: 240 HLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVS 299
Query: 317 GYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV 375
GY FL+ + +Q P+ T ++ + LQ
Sbjct: 300 GYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQ---------------- 343
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
G S + L ++ N + +Y + G+ + + ++ + + D
Sbjct: 344 ----------HGRCSHGSVIIRGLASETSIC--NALIDMYAKCGRIDLSRQVFNMMPSRD 391
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL-- 493
IVSWN +IA +G KE LF M PD TF+ LLSACS + G
Sbjct: 392 IVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFH 451
Query: 494 -----HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISA 547
+GL + E ++C ++D+ + G + + + M R +V W AL+ A
Sbjct: 452 VMGHGYGLTPRME-----HYIC--MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 142/266 (53%), Gaps = 6/266 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGF---EPTQFTFGGLLSCDSLNPVE 57
MP RN V+++++I + C + A +F M+ +G PT L +C SL+ +
Sbjct: 184 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA-SALRACASLDHLR 242
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G QL A + K+G+ AD G +LL +Y + G +D+ +++F++M K V+++++VS +
Sbjct: 243 MGEQLHALLAKSGVH-ADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGY 301
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G E+ +F ++ V ++ V +I S+ L+ G HG VI G E
Sbjct: 302 VQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASET 361
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ N+L++MY +C I + ++F + RD+VSWNT+I +A L+L M+
Sbjct: 362 SICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNL 421
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGK 262
P+ TF+ ++++C+ I GK
Sbjct: 422 GFPPDGVTFICLLSACSHSGLVIEGK 447
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP R++VS+N++I+ Y G ++A +FL M N GF P TF LLS C V
Sbjct: 387 MPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEG 446
Query: 60 QLQASVLKNGLFCADAFVG-TALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIV 113
+ V+ +G ++ L R G LDE + MP R + W +++
Sbjct: 447 KHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 502
>gi|302766239|ref|XP_002966540.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
gi|300165960|gb|EFJ32567.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
Length = 630
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 164/605 (27%), Positives = 294/605 (48%), Gaps = 39/605 (6%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHG---CLDEVVSVFEDMPRKSLVTWNSIV 113
+G ++ +L G F +G L+ +Y + G L + +VF+ MP+K +V+W+ I+
Sbjct: 16 DGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVFDQMPKKDVVSWSCII 75
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
+ +G+ G + + LF R +V E V + S +DL G IH ++
Sbjct: 76 AAYGQAGHCREAINLF---QRMDVEPNEMVIVSTLAACSGAKDLALGMAIHARILSPDLR 132
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ V +L+NMY +C I A +F + +DVVSW +I A A+ + +ALE M
Sbjct: 133 KSVFVGTALLNMYAKCGAIEQARAVFDQIPHKDVVSWTAMITAFAQMGDCRQALETLEGM 192
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
V PN TFV I +C+ + G+ IHA VI L D+ + +ALV YAK +
Sbjct: 193 IQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITIQNALVSMYAKGSSA 252
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSS 352
E A F + ++N VSWN++I +A+ + + L + L G +P++ +F VL +
Sbjct: 253 EEALSVFQRMEDRNRVSWNSMIAAFAASAQSCAAMGLFHGMNLEGIKPDDVSFLGVLSAC 312
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ + L+ C I E + A++ P + N +
Sbjct: 313 SSTRCLR-SCKRIHSQLE-------------------------LAAVHSPPDLSVENSLV 346
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
Y + G ++ ++ ++VSW ++ A +G+ + LEL+ M I PD+
Sbjct: 347 TAYAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSV 406
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN- 531
++++ A S + ++ L LH + + + + N LI+MY +CGS+ + ++F+
Sbjct: 407 VLLNVIYAGSLVGDVGLARKLHARVASSSFMLK-IQIQNALINMYTRCGSLEEARRVFDG 465
Query: 532 ----EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+ R+ +TW++L++ +G A+ A+ +R+M G +PD V +++L +C H G
Sbjct: 466 IERKNLVARDTVTWSSLVAGYAHHGHAEYAILLYRDMHLEGVQPDSVTYVSILNSCSHAG 525
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
L+ + F M + + DH+ C+VD+L R G + AE ++ MPF P+ + W T
Sbjct: 526 LLAQARHFFVSMVEDHCLAAWPDHWKCMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNTL 585
Query: 648 LEGCQ 652
L C+
Sbjct: 586 LGCCK 590
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 150/584 (25%), Positives = 283/584 (48%), Gaps = 49/584 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
MP ++VVS++ II+AY + G+ +A+ +F M EP + L +C + G
Sbjct: 63 MPKKDVVSWSCIIAAYGQAGHCREAINLFQRM---DVEPNEMVIVSTLAACSGAKDLALG 119
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A +L L FVGTALL +Y + G +++ +VF+ +P K +V+W ++++ F +
Sbjct: 120 MAIHARILSPDLR-KSVFVGTALLNMYAKCGAIEQARAVFDQIPHKDVVSWTAMITAFAQ 178
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + ++++ V +FV I S+ + L+ G +IH VI G ++ +
Sbjct: 179 MGDCRQALETLEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITI 238
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LV+MY + + A +F+ +E R+ VSWN++I A A S A+ L+ M+++ +
Sbjct: 239 QNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCAAMGLFHGMNLEGI 298
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC--DVFVGSALVDFYAKCDNLEGA 296
P+ +F+ V+++C+ + K IH+++ A+ D+ V ++LV YAKC +LE A
Sbjct: 299 KPDDVSFLGVLSACSSTRCLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEAA 358
Query: 297 HLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F I KN+VSW A++ Y + ++ L +++ +P+ +V+ +
Sbjct: 359 ERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYA---- 414
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
GSL+ GL A V + + + N + +Y
Sbjct: 415 ---------------------GSLVGDV---GLARKLHARVASSSFMLKIQIQNALINMY 450
Query: 416 NRTGQYNETVKLLSQLERP-----DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
R G E ++ +ER D V+W+ ++A AH+G + + L++ M + PD
Sbjct: 451 TRCGSLEEARRVFDGIERKNLVARDTVTWSSLVAGYAHHGHAEYAILLYRDMHLEGVQPD 510
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVK 528
+ T+VS+L++CS LA + + +++ D + C ++D+ G+ G +G +
Sbjct: 511 SVTYVSILNSCSHAGLLAQARHFFVSMVEDHCLAAWPDHWKC--MVDVLGRAGFVGRAED 568
Query: 529 IFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
+ M +V+ W L+ ++G A+R R +G P
Sbjct: 569 VVRNMPFQPDVVAWNTLLGCCKVHGDARRGAVAARNA--VGISP 610
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG---SIGSSVKIF 530
+ SLL C +LA G +H I T + N+LI MY KCG S+ + +F
Sbjct: 1 YASLLRRCGISRSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVF 60
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
++M ++V++W+ +I+A G G + A+ F+ M+ +P+ + +++ L AC +
Sbjct: 61 DQMPKKDVVSWSCIIAAYGQAGHCREAINLFQRMD---VEPNEMVIVSTLAACSGAKDLA 117
Query: 591 EGMELFERMNRSYGVEPEMDHY----HCVVDLLVRYGHLKEAEKIITTMP 636
GM + R+ + P++ ++++ + G +++A + +P
Sbjct: 118 LGMAIHARI-----LSPDLRKSVFVGTALLNMYAKCGAIEQARAVFDQIP 162
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 177/655 (27%), Positives = 323/655 (49%), Gaps = 40/655 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQA 63
++V +NSI++ Y R G+ ++ + F M G P ++ LL + Q+
Sbjct: 119 QDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGASDGHLGYAKQIHG 178
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIVSIFGKHGFV 122
++ +F D F+ + L+ +Y G + +F+++ K ++V WN ++ FG++G
Sbjct: 179 YSVRK-VFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLW 237
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
E+ + ++ V L +SF + + + FG Q+H ++K GF+ + V SL
Sbjct: 238 ENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSL 297
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
+ MY +C + AE +F V ++ WN +I A + L++Y +M V + P+
Sbjct: 298 LTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDS 357
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T V++SC + + G+ IHA+++K ++ +V + SAL+ Y+KC N + A+ F+
Sbjct: 358 LTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNT 417
Query: 303 ISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
I +++V+W ++I G+ ++ ++ + G +P+ + V+ + + + L
Sbjct: 418 IKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLG 477
Query: 362 CLI----IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
C I I+ G E +V SL+ Y+K N P+
Sbjct: 478 CTIHGLAIKSGLEQDVFVASSLVDMYSK-------------FNFPKM------------- 511
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
+ + S + ++V+WN +I+ NG + LF M ++PD+ + S+
Sbjct: 512 ------SGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSV 565
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L + S + L G ++HG + + I SD + N LIDMY KCG + + IF M N
Sbjct: 566 LVSVSSVAVLRKGKAVHGYLIRQRI-PSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTN 624
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
++TW +I+ G +G +A+ F EM G PD + I++LT+C H G + EG++LF+
Sbjct: 625 LVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQ 684
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M +G+EP M+HY +VDLL R G L +A + +P P+ IW + L C+
Sbjct: 685 LMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSCR 739
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 168/651 (25%), Positives = 312/651 (47%), Gaps = 50/651 (7%)
Query: 12 IISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNG 69
I++ + YV DAL+ + T+FT+ LL +C L+ ++ G + ++++ G
Sbjct: 24 IVTLVQQGQYV-DALQFY---SRNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKG 79
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-----KSLVTWNSIVSIFGKHGFVED 124
F +D ++ T+L+ Y + G V VF+ +P + + WNSIV+ + + G ++
Sbjct: 80 FFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKE 139
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ FC + V S ++ G S+ L + +QIHG ++ F + + + L+
Sbjct: 140 GIAQFCRMQLFGVRPDAYSLC-ILLGASDGH-LGYAKQIHGYSVRKVFYGDPFLESGLIY 197
Query: 185 MYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
MYF C A ++FK++E + +VV+WN +IG E+ + +LE+YL + V
Sbjct: 198 MYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSA 257
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
+F +++C + G +H ++K E D +V ++L+ Y+KC +E A F ++
Sbjct: 258 SFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQV 317
Query: 304 SNKNIVSWNALILGYASKSSP---TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
S K WNA+I Y I+ +++LQ+ P+ T ++VL S
Sbjct: 318 SVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQI--PPDSLTATNVLSSC-------- 367
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
CL+ Y G L+ + I +A +AL +Y++ G
Sbjct: 368 -CLV-------GSYDFGRLIHAELVKRPIQSNVALQSAL------------LTMYSKCGN 407
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
++ + + ++ D+V+W +I+ N Y E LE + M PD+ S++SA
Sbjct: 408 SDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSA 467
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C+ L N+ LG ++HGL K+ + D FV + L+DMY K S +F++M +N++
Sbjct: 468 CTGLKNVNLGCTIHGLAIKSG-LEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVA 526
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W ++IS NG ++ F +M G PD V++ +VL + ++R+G + +
Sbjct: 527 WNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLI 586
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
R + ++ + ++D+ ++ G LK A+ I M N + W + GC
Sbjct: 587 RQR-IPSDLQLENALIDMYIKCGFLKYAQHIFQNM-LQTNLVTWNIMIAGC 635
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY--MRAARIYPDNYTFVSLLSACSK 483
+ LS L D++ IV G Y + L+ + + A R +T+ SLL AC
Sbjct: 9 RKLSNLAHSDLIDPKIV--TLVQQGQYVDALQFYSRNPLNATR-----FTYPSLLKACGF 61
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN-----EMTDRNV 538
L NL G ++H I SD ++ LI+ Y KCGS G++VK+F+ E++ ++V
Sbjct: 62 LSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDV 121
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
W ++++ G + + +F M+ G +PD +L +L A
Sbjct: 122 TFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGA 165
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
MP +N+V++NSIIS Y R G + ++ +F M G P + +L S V +G
Sbjct: 519 MPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKG 578
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +++ + +D + AL+ +Y + G L +F++M + +LVTWN +++ G
Sbjct: 579 KAVHGYLIRQRI-PSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGS 637
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVI 148
HG M LF E+ +A + +F+ ++
Sbjct: 638 HGDWLKAMSLFDEMRSFGIAPDDITFISLL 667
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 186/658 (28%), Positives = 342/658 (51%), Gaps = 47/658 (7%)
Query: 2 PDRNVVSFN-SIISAYSRCGYVEDALRMFLYMINRGF--EPTQFTFGGLLSCDSLNPVEG 58
P + S N S+++A R +E AL +F + GF Q T +L + G
Sbjct: 39 PQTTIASLNRSMLTALRRNLSLE-ALDLFKKQLQWGFVGNIDQVTVAIVLKACCGDSKLG 97
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A + +G F + V +L+ +Y + G D + VFE++ +V+WN+++S F +
Sbjct: 98 CQIHAFAISSG-FISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQR 156
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+D + + + VA + V+ S+ + FG Q+H ++K G D E+ V
Sbjct: 157 S---DDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFV 213
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG-KALELYLRMSVDI 237
N+L+ MY +C + A ++F ++ +D+VSWN ++ A+ N G +A+ ++L M +
Sbjct: 214 GNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEG 273
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ + +F I++C + LG+ IH+ +K + V V + L+ Y+KC+++E A
Sbjct: 274 MKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAK 333
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
L F I ++N+VSW +I S+ TS+F E+ + G PN+ TF ++
Sbjct: 334 LVFESIIDRNVVSWTTMI--SISEEDATSLF--NEMRRDGVYPNDVTFVGLI-------- 381
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
H + ++ E + + G + + +F++ LN+ +++ +Y +
Sbjct: 382 ---HAITMKNLVEEGQMIHGVCVKT-----------SFLSELNVSNSLIT------MYAK 421
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF-KYMRAARIYPDNYTFVS 476
++++K+ +L +I+SWN +I+ A NG ++E L+ F + +R P+ +TF S
Sbjct: 422 FESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMESR--PNEFTFGS 479
Query: 477 LLS--ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+LS A ++ ++ G H I K + +++ V + L+DMY K GSI S+ +F+E
Sbjct: 480 VLSSIASAEAISMRHGQRCHSHILKLGL-NTNPIVSSALLDMYAKRGSICESLGVFSETP 538
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+N + WTA+ISA +G + + F++ME G KPD + +AV+TAC G+V G +
Sbjct: 539 LKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQ 598
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
LF M + + +EP +HY +VD+L R G LKEAE+ + +P + ++ L C+
Sbjct: 599 LFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACR 656
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 250/484 (51%), Gaps = 35/484 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVE-DALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE- 57
M ++++VS+N+++S Y++ G +A+ +FL M+ G + +F G +S C E
Sbjct: 237 MRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFEL 296
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ + +K G + V L+ Y + +++ VFE + +++V+W +++SI
Sbjct: 297 GRQIHSLAVKIG-YDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISE 355
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
ED LF E+ R V + +FVG+IH ++ + +E G+ IHG+ +K F EL
Sbjct: 356 -----EDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELN 410
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V+NSL+ MY + + + K+F+++ R+++SWN++I A++ + +AL+ +L ++
Sbjct: 411 VSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALME- 469
Query: 238 VFPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
PN+ TF V++S A + + G+ H+ ++K L + V SAL+D YAK ++
Sbjct: 470 SRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICE 529
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRS--- 351
+ FSE KN V+W A+I +A ++ L ++ + G +P+ TF V+ +
Sbjct: 530 SLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGR 589
Query: 352 ----SLAFQLLQ--LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV------TAL 399
+QL + +I E+Y S++ ++G + +A FV L
Sbjct: 590 KGMVDTGYQLFNSMVKDHLIEPSPEHY----SSMVDMLGRAGRLKEAEEFVGQIPGGAGL 645
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
++ ++++ A I G + + + L ++E S+ ++ A G++++V ++
Sbjct: 646 SVLQSLLGACRIHGNVDMAKRVADD---LIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIR 702
Query: 460 KYMR 463
K MR
Sbjct: 703 KGMR 706
>gi|302782567|ref|XP_002973057.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
gi|300159658|gb|EFJ26278.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
Length = 531
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 252/473 (53%), Gaps = 12/473 (2%)
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
MY +C + A K+F ++ RD VSW ++I + A + +AL+LY +M D + P+ T
Sbjct: 1 MYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSIT 60
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
F + +C L + GK+IHA+++ + +E D FVGSAL++ YA+C ++ A F +I
Sbjct: 61 FTSALLACTKLAD---GKAIHARIVSSNMESD-FVGSALINMYARCGDVSSARQAFEKIQ 116
Query: 305 NKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ---- 359
NK++V W +L+ Y ++ L + G + T+ L + + L+
Sbjct: 117 NKHVVCWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKA 176
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+H + G+++ V +L+T YAK G + A A L AV N + +Y + G
Sbjct: 177 IHLRVSECGFQSL-VVHTALLTMYAKCGELDAARAVFNRLASNVAV--QNALVTMYAKCG 233
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
R D+VSWN +I A A +G +E L+L++ M + + PD T S LS
Sbjct: 234 SLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLS 293
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
AC+ +L LG +H + K + S V L++MYG+CG + ++ +F +M R+V+
Sbjct: 294 ACAISGSLQLGREIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVL 353
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+WTA+ S G A + L+ + EM G +P+ + ++L C H GL+ G+E F M
Sbjct: 354 SWTAMTSVYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEM 413
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ V P +H+ C+VDLL R G L++AE ++ +MP+ P+++ W T L C+
Sbjct: 414 QSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCK 466
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 238/517 (46%), Gaps = 74/517 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEGA 59
+ +R+ VS+ S+IS+Y+ G+ ++AL ++ M G +P TF LL+C L +G
Sbjct: 18 IKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKL--ADGK 75
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ A ++ + + FVG+AL+ +Y R G + FE + K +V W S+++ + +
Sbjct: 76 AIHARIVSSNM--ESDFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQT 133
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD------ 173
G + + L+ + V ++V + ++ L+ G+ IH V + GF
Sbjct: 134 GHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHLRVSECGFQSLVVHT 193
Query: 174 -----------------------YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
+ V N+LV MY +C + A+ F+ +D+VSW
Sbjct: 194 ALLTMYAKCGELDAARAVFNRLASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSW 253
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
N +IGA A+ +AL+LY M+ V P++ T +++CA + LG+ IH++V+K
Sbjct: 254 NAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLK 313
Query: 271 N-ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF- 328
N + + + V +ALV+ Y +C LE A F ++ ++++SW A+ YA + +
Sbjct: 314 NQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSVYAQQGHADQVLD 373
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
L +E++ G RPNE TF+ S++ + +GL
Sbjct: 374 LYLEMVLHGIRPNEITFT-------------------------------SILVGCSHAGL 402
Query: 389 ISDALAFVTALNIPRAVVPAN----IIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVI 443
++ + + VVP + + R+G+ + L+ + +PD V+W V+
Sbjct: 403 LARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVL 462
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+C + D + R + P+N + SLLS+
Sbjct: 463 GSCKTHSDADTAKRAAR--RVKELDPENTSLYSLLSS 497
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/549 (23%), Positives = 252/549 (45%), Gaps = 75/549 (13%)
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
+YG+ G ++E VF+ + + V+W S++S + +GF ++ + L+ ++ + +
Sbjct: 1 MYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSIT 60
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
F + + D G+ IH ++ + + + V ++L+NMY +C + SA + F+ ++
Sbjct: 61 FTSALLACTKLAD---GKAIHARIVSSNMESDF-VGSALINMYARCGDVSSARQAFEKIQ 116
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
+ VV W +++ A ++ ++ +AL+LY RM + V + T+V + +CA L GK+
Sbjct: 117 NKHVVCWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKA 176
Query: 264 IH-----------------------------AKVIKNALECDVFVGSALVDFYAKCDNLE 294
IH A+ + N L +V V +ALV YAKC +LE
Sbjct: 177 IHLRVSECGFQSLVVHTALLTMYAKCGELDAARAVFNRLASNVAVQNALVTMYAKCGSLE 236
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F K++VSWNA+I YA ++ L + G P+E T + L +
Sbjct: 237 LAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACA 296
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
LQL G E + VL + +F ++L + A+V
Sbjct: 297 ISGSLQL-------GREIHSRVLKN--------------QSFQSSLMVQTALV------N 329
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y R G+ + + + D++SW + + A G +VL+L+ M I P+ T
Sbjct: 330 MYGRCGRLETARSMFEDMGQRDVLSWTAMTSVYAQQGHADQVLDLYLEMVLHGIRPNEIT 389
Query: 474 FVSLLSACSKLCNLALG-SSLHGLIKKTEIIS-SDTFVCNMLIDMYGKCGSIGSSVKIFN 531
F S+L CS LA G + + E++ + F+C ++D+ G+ G + + +
Sbjct: 390 FTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLC--MVDLLGRSGRLRDAEALVE 447
Query: 532 EMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFKPDRVALIAVLTAC-RHG 586
M + + W ++ + + A+RA + +E++ P+ +L ++L++
Sbjct: 448 SMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELD-----PENTSLYSLLSSIFTAA 502
Query: 587 GLVREGMEL 595
GL +E +E+
Sbjct: 503 GLPQEALEV 511
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 136/267 (50%), Gaps = 15/267 (5%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
+++VS+N++I AY++ G +AL ++ M ++G P + T LS C ++ G ++
Sbjct: 248 KDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREI 307
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ VLKN F + V TAL+ +YGR G L+ S+FEDM ++ +++W ++ S++ + G
Sbjct: 308 HSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSVYAQQGH 367
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + L+ E+V + E +F ++ G S+ L G + ++ ++E++
Sbjct: 368 ADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVEC---FLEMQSEHEVVPIRE 424
Query: 182 ----LVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRMSVD 236
+V++ + + AE + + + + D V+W T++G+ + A R V
Sbjct: 425 HFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARR--VK 482
Query: 237 IVFPNQTTFVYVINS---CAGLQNSIL 260
+ P T+ +++S AGL L
Sbjct: 483 ELDPENTSLYSLLSSIFTAAGLPQEAL 509
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 174/539 (32%), Positives = 263/539 (48%), Gaps = 51/539 (9%)
Query: 132 LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
++R VA +F + S D G IH I G +L V+ +L++MY +CA
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE--LYLRMSVDIVFPNQTTFVYVI 249
+ A +F + RD+V+WN ++ A + A+ L ++M + + PN +T V ++
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 250 NSCAGLQNSILGKSIHAKVI----------KNALECDVFVGSALVDFYAKCDNLEGAHLC 299
A G S+HA I K+ L V +G+AL+D YAKC +L A
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIE--LLQLGYRPNEFTFSHVLRSSLAFQL 357
F + +N V+W+ALI G+ S T FLL + L Q + + + LR+ +
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L QLH L+ + G SL++ YAK+GLI
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLI------------------------ 276
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++ + L ++ D VS++ +++ NG +E +FK M+A + PD T
Sbjct: 277 --------DQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAAT 328
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
VSL+ ACS L L G HG + ++S+T +CN LIDMY KCG I S ++FN M
Sbjct: 329 MVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSICNALIDMYAKCGRIDLSRQVFNMM 387
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
R++++W +I+ G++G + A F EM LGF PD V I +L+AC H GLV EG
Sbjct: 388 PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGK 447
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M YG+ P M+HY C+VDLL R G L EA + I +MP + +W L C+
Sbjct: 448 HWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACR 506
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 130/540 (24%), Positives = 235/540 (43%), Gaps = 60/540 (11%)
Query: 32 MINRGFEPTQFTFG-GLLSCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
M+ P +TF L +C +L G + + GL AD FV TALL +Y +
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQ-ADLFVSTALLDMYVKCA 59
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM--FLFCELVRSEVALTESSFVGV 147
CL + +F MP + LV WN++++ + HG + L ++ + S+ V +
Sbjct: 60 CLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVAL 119
Query: 148 IHGLSNEQDLEFGEQIHGLVI----------KNGFDYELLVANSLVNMYFQCAGIWSAEK 197
+ L+ + L G +H I K+ +L+ +L++MY +C + A +
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQ 256
+F + R+ V+W+ +IG +A L+ M + + F + T+ + +CA L
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLD 239
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ +G+ +HA + K+ + D+ G++L+ YAK ++ A F E++ K+ VS++AL+
Sbjct: 240 HLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVS 299
Query: 317 GYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV 375
GY FL+ + +Q P+ T ++ + LQ
Sbjct: 300 GYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQ---------------- 343
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
G S + L ++ N + +Y + G+ + + ++ + + D
Sbjct: 344 ----------HGRCSHGSVIIRGLASETSIC--NALIDMYAKCGRIDLSRQVFNMMPSRD 391
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL-- 493
IVSWN +IA +G KE LF M PD TF+ LLSACS + G
Sbjct: 392 IVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFH 451
Query: 494 -----HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISA 547
+GL + E ++C ++D+ + G + + + M R +V W AL+ A
Sbjct: 452 VMGHGYGLTPRME-----HYIC--MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 142/266 (53%), Gaps = 6/266 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGF---EPTQFTFGGLLSCDSLNPVE 57
MP RN V+++++I + C + A +F M+ +G PT L +C SL+ +
Sbjct: 184 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA-SALRACASLDHLR 242
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G QL A + K+G+ AD G +LL +Y + G +D+ +++F++M K V+++++VS +
Sbjct: 243 MGEQLHALLAKSGVH-ADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGY 301
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G E+ +F ++ V ++ V +I S+ L+ G HG VI G E
Sbjct: 302 VQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASET 361
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ N+L++MY +C I + ++F + RD+VSWNT+I +A L+L M+
Sbjct: 362 SICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNL 421
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGK 262
P+ TF+ ++++C+ I GK
Sbjct: 422 GFPPDGVTFICLLSACSHSGLVIEGK 447
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP R++VS+N++I+ Y G ++A +FL M N GF P TF LLS C V
Sbjct: 387 MPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEG 446
Query: 60 QLQASVLKNGLFCADAFVG-TALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIV 113
+ V+ +G ++ L R G LDE + MP R + W +++
Sbjct: 447 KHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 502
>gi|15241649|ref|NP_196466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171897|sp|Q9FNN9.1|PP370_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g08490
gi|9759343|dbj|BAB09998.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003927|gb|AED91310.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 849
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 185/672 (27%), Positives = 341/672 (50%), Gaps = 28/672 (4%)
Query: 1 MPDRNVVSFNSIISAYS-RCGYVEDALRMFLYM-INRGFEPTQFTFGGLLS-CDSL-NPV 56
M + V +N +++ S CG + +R F M +P+ TF +L C L +
Sbjct: 82 MDSLDPVVWNIVLTGLSVSCG--RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSY 139
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHG-CLDEVVSVFEDMPRKSLVTWNSIVSI 115
G + + ++K GL D VG AL+ +Y + G + + F+ + K +V+WN+I++
Sbjct: 140 NGKSMHSYIIKAGLE-KDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAG 198
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVI---HGLSNEQDLEFGEQIHGLVIKNGF 172
F ++ + D FC +++ ++ V+ + G QIH V++ +
Sbjct: 199 FSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSW 258
Query: 173 -DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
+ V NSLV+ Y + I A +F + +D+VSWN +I A + + KA +L+
Sbjct: 259 LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFH 318
Query: 232 RM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAK 289
+ V P+ T + ++ CA L + GK IH+ +++++ L D VG+AL+ FYA+
Sbjct: 319 NLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYAR 378
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP---NEFTFS 346
+ A+ FS +S K+I+SWNA++ +A SP L L L + T
Sbjct: 379 FGDTSAAYWAFSLMSTKDIISWNAILDAFAD--SPKQFQFLNLLHHLLNEAITLDSVTIL 436
Query: 347 HVLRSSLAFQ----LLQLHCLIIRMG--YENYEYVLG-SLMTSYAKSGLISDALAFVTAL 399
+L+ + Q + ++H ++ G ++ E LG +L+ +YAK G + A L
Sbjct: 437 SLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGL 496
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ R +V N + Y +G +++ L +++ D+ +W++++ A + E + +F
Sbjct: 497 SERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVF 556
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
+ ++A + P+ T ++LL C++L +L L HG I + + D + L+D+Y K
Sbjct: 557 REIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL--GDIRLKGTLLDVYAK 614
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
CGS+ + +F R+++ +TA+++ ++G + AL + M KPD V + +
Sbjct: 615 CGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTM 674
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
LTAC H GL+++G+++++ + +G++P M+ Y C VDL+ R G L +A +T MP P
Sbjct: 675 LTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEP 734
Query: 640 NALIWRTFLEGC 651
NA IW T L C
Sbjct: 735 NANIWGTLLRAC 746
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 202/414 (48%), Gaps = 37/414 (8%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
F+ V+ ++ DL G +HG V K G V+ S++NMY +C + +KMF+ ++
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMD 83
Query: 204 IRDVVSWNTIIGALA-----ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
D V WN ++ L+ E+ F KA+ D P+ TF V+ C L +S
Sbjct: 84 SLDPVVWNIVLTGLSVSCGRETMRFFKAMHF-----ADEPKPSSVTFAIVLPLCVRLGDS 138
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL-EGAHLCFSEISNKNIVSWNALILG 317
GKS+H+ +IK LE D VG+ALV YAK + A+ F I++K++VSWNA+I G
Sbjct: 139 YNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAG 198
Query: 318 YASKSSPTSIFL-LIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
++ + F +L+ PN T ++VL + + R G + + YV+
Sbjct: 199 FSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD----KNIACRSGRQIHSYVV 254
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
+S L + V N + Y R G+ E L +++ D+
Sbjct: 255 -------QRSWLQTH-------------VFVCNSLVSFYLRVGRIEEAASLFTRMGSKDL 294
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
VSWN+VIA A N ++ + +LF + + PD+ T +S+L C++L +LA G +H
Sbjct: 295 VSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHS 354
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
I + + DT V N LI Y + G ++ F+ M+ +++I+W A++ A
Sbjct: 355 YILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D+ F+ ++ AC+ + +L G +LHG + K I+ V +++MY KC + K+
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSE-VSKSVLNMYAKCRRMDDCQKM 78
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG-FKPDRVALIAVLTACRHGGL 588
F +M + + W +++ L ++ + + F+ M F KP V VL C G
Sbjct: 79 FRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGD 137
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYG 623
G + + ++ G+E + + +V + ++G
Sbjct: 138 SYNGKSMHSYIIKA-GLEKDTLVGNALVSMYAKFG 171
>gi|302756145|ref|XP_002961496.1| hypothetical protein SELMODRAFT_61782 [Selaginella moellendorffii]
gi|300170155|gb|EFJ36756.1| hypothetical protein SELMODRAFT_61782 [Selaginella moellendorffii]
Length = 570
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 169/589 (28%), Positives = 301/589 (51%), Gaps = 44/589 (7%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D ++G L+ +YG+ G ++E ++VF+ + +++ +W ++ ++G E + LF ++
Sbjct: 15 DTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTENGLSELTLELFRRML 74
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYEL--LVANSLVNMYFQCA 190
+ +++GV+ S + LE G ++ L++ F L V SL+N+Y C
Sbjct: 75 LEGIRPDRVAYLGVLKACSELRYLEEGREVENLLVSGSCFPSSLDPAVLTSLLNLYASCG 134
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-ALELYLRMSVDIVFPNQTTFVYVI 249
+ +A ++F+ +D+V WN+++ A A+ E G+ LE + +M ++ V N +F V+
Sbjct: 135 SLENARRVFESFHEKDLVCWNSMLAAYAKHEKTGRQTLEFFQKMLLEGVAANVVSFTCVV 194
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-NI 308
+C+ + S G +H ++ + L D F+ +ALV+ Y+KC L A F + K ++
Sbjct: 195 GACSRPELSEQGTVVHEQITCSGLVADSFLAAALVNMYSKCGRLGSAWELFQRVDVKMSL 254
Query: 309 VSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL----HCL 363
VSWN+++ +A ++ T + + +LQL G +P+ T VL + + Q L++ +
Sbjct: 255 VSWNSILAAHAQRADLTKVLEIFGMLQLEGLKPSGVTLISVLGACCSTQALRIVEHIYER 314
Query: 364 IIRMGYENYEYVLGS-LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
+ ++G +++ LG+ LMTS+ G ++DA +
Sbjct: 315 VAQVGELSHDLFLGTALMTSFCDCGKLADAES---------------------------- 346
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
L +L R + SWN +IA +G + L L M I P+ TF+ ++ ACS
Sbjct: 347 ----LFYRLNRWNAASWNTMIAGYVQHGFDLQALHLLYEMDLEGIKPNVVTFLGIVDACS 402
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
L L ++H I +++ DT + ++ MY C S+ S ++F + R+ ++W
Sbjct: 403 SLAVLGNAKAVHERISASKV-GLDTVLGTAIVSMYANCDSLEDSRRVFESLDLRDTVSWN 461
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
A+I+A G A + LE FR M G KPD I VL AC H G V + +LF + R
Sbjct: 462 AVIAAYAEQGHAYQVLESFRCMIHQGLKPDNDTFIFVLHACSHAGSVEQACDLFNSITRD 521
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ + P + HY CV+DLL R G L+ A ++I MP+ PN+L W T L C
Sbjct: 522 HNLHPAIQHYVCVIDLLGRAGWLENAHELINRMPYQPNSLAWSTLLGAC 570
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 203/443 (45%), Gaps = 30/443 (6%)
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H + + G D + + N LV MY +C + A +F+ ++ R+V SW ++ A E+
Sbjct: 4 HRELQRLGIDQDTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTENGLS 63
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL---ECDVFVG 280
LEL+ RM ++ + P++ ++ V+ +C+ L+ G+ + ++ + D V
Sbjct: 64 ELTLELFRRMLLEGIRPDRVAYLGVLKACSELRYLEEGREVENLLVSGSCFPSSLDPAVL 123
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP 340
++L++ YA C +LE A F K++V WN+++ YA + G +
Sbjct: 124 TSLLNLYASCGSLENARRVFESFHEKDLVCWNSMLAAYAKHE------------KTGRQT 171
Query: 341 NEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
EF F +L +A ++ C++ + SGL++D+ +N
Sbjct: 172 LEF-FQKMLLEGVAANVVSFTCVVGACSRPELSEQGTVVHEQITCSGLVADSFLAAALVN 230
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELF 459
+Y++ G+ +L +++ + +VSWN ++AA A D +VLE+F
Sbjct: 231 -------------MYSKCGRLGSAWELFQRVDVKMSLVSWNSILAAHAQRADLTKVLEIF 277
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
++ + P T +S+L AC L + ++ + + +S D F+ L+ +
Sbjct: 278 GMLQLEGLKPSGVTLISVLGACCSTQALRIVEHIYERVAQVGELSHDLFLGTALMTSFCD 337
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
CG + + +F + N +W +I+ +GF +AL EM+ G KP+ V + +
Sbjct: 338 CGKLADAESLFYRLNRWNAASWNTMIAGYVQHGFDLQALHLLYEMDLEGIKPNVVTFLGI 397
Query: 580 LTACRHGGLVREGMELFERMNRS 602
+ AC ++ + ER++ S
Sbjct: 398 VDACSSLAVLGNAKAVHERISAS 420
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 179/394 (45%), Gaps = 34/394 (8%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
++ H ++ + ++ D ++G+ LV Y KC +E A F I ++N+ SW L+
Sbjct: 1 RAAHRELQRLGIDQDTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTEN 60
Query: 322 S-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM 380
S ++ L +L G RP+ + VL++ C +R
Sbjct: 61 GLSELTLELFRRMLLEGIRPDRVAYLGVLKA----------CSELR-------------- 96
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIA--GIYNRTGQYNETVKLLSQLERPDIVS 438
Y + G + L V+ P ++ PA + + +Y G ++ D+V
Sbjct: 97 --YLEEGREVENL-LVSGSCFPSSLDPAVLTSLLNLYASCGSLENARRVFESFHEKDLVC 153
Query: 439 WNIVIAACA-HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
WN ++AA A H ++ LE F+ M + + +F ++ ACS+ G+ +H I
Sbjct: 154 WNSMLAAYAKHEKTGRQTLEFFQKMLLEGVAANVVSFTCVVGACSRPELSEQGTVVHEQI 213
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQR 556
+ ++ +D+F+ L++MY KCG +GS+ ++F + + ++++W ++++A +
Sbjct: 214 TCSGLV-ADSFLAAALVNMYSKCGRLGSAWELFQRVDVKMSLVSWNSILAAHAQRADLTK 272
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
LE F ++ G KP V LI+VL AC +R ++ER+ + + ++ ++
Sbjct: 273 VLEIFGMLQLEGLKPSGVTLISVLGACCSTQALRIVEHIYERVAQVGELSHDLFLGTALM 332
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G L +AE + + NA W T + G
Sbjct: 333 TSFCDCGKLADAESLFYRLN-RWNAASWNTMIAG 365
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 158/330 (47%), Gaps = 34/330 (10%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF----GGLLSCDSLNPVEGAQ 60
++VS+NSI++A+++ + L +F + G +P+ T G S +L VE
Sbjct: 253 SLVSWNSILAAHAQRADLTKVLEIFGMLQLEGLKPSGVTLISVLGACCSTQALRIVE--H 310
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ V + G D F+GTAL+ + G L + S+F + R + +WN++++ + +HG
Sbjct: 311 IYERVAQVGELSHDLFLGTALMTSFCDCGKLADAESLFYRLNRWNAASWNTMIAGYVQHG 370
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F + L E+ + +F+G++ S+ L + +H + + + ++
Sbjct: 371 FDLQALHLLYEMDLEGIKPNVVTFLGIVDACSSLAVLGNAKAVHERISASKVGLDTVLGT 430
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
++V+MY C + + ++F+ +++RD VSWN +I A AE + + LE + M + P
Sbjct: 431 AIVSMYANCDSLEDSRRVFESLDLRDTVSWNAVIAAYAEQGHAYQVLESFRCMIHQGLKP 490
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG--------------SALVDF 286
+ TF++V+++C+ HA ++ A CD+F ++D
Sbjct: 491 DNDTFIFVLHACS-----------HAGSVEQA--CDLFNSITRDHNLHPAIQHYVCVIDL 537
Query: 287 YAKCDNLEGAHLCFSEIS-NKNIVSWNALI 315
+ LE AH + + N ++W+ L+
Sbjct: 538 LGRAGWLENAHELINRMPYQPNSLAWSTLL 567
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 127/264 (48%), Gaps = 5/264 (1%)
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
L I + N++ +Y + G E + + +++ ++ SW I++ AC NG + LEL
Sbjct: 10 LGIDQDTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTENGLSELTLEL 69
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDM 516
F+ M I PD ++ +L ACS+L L G + L+ S D V L+++
Sbjct: 70 FRRMLLEGIRPDRVAYLGVLKACSELRYLEEGREVENLLVSGSCFPSSLDPAVLTSLLNL 129
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN-GFAQRALEKFREMEFLGFKPDRVA 575
Y CGS+ ++ ++F +++++ W ++++A + ++ LE F++M G + V+
Sbjct: 130 YASCGSLENARRVFESFHEKDLVCWNSMLAAYAKHEKTGRQTLEFFQKMLLEGVAANVVS 189
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
V+ AC L +G + E++ S G+ + +V++ + G L A ++ +
Sbjct: 190 FTCVVGACSRPELSEQGTVVHEQITCS-GLVADSFLAAALVNMYSKCGRLGSAWELFQRV 248
Query: 636 PFPPNALIWRTFLEG-CQRCRIAK 658
+ + W + L QR + K
Sbjct: 249 DVKMSLVSWNSILAAHAQRADLTK 272
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA-QL 61
R+ VS+N++I+AY+ G+ L F MI++G +P TF +L +C VE A L
Sbjct: 455 RDTVSWNAVIAAYAEQGHAYQVLESFRCMIHQGLKPDNDTFIFVLHACSHAGSVEQACDL 514
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIV 113
S+ ++ ++ L GR G L+ + MP + + + W++++
Sbjct: 515 FNSITRDHNLHPAIQHYVCVIDLLGRAGWLENAHELINRMPYQPNSLAWSTLL 567
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 181/601 (30%), Positives = 293/601 (48%), Gaps = 43/601 (7%)
Query: 61 LQASVLKNGLFCADAFV--GTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L + +GL + F+ + L Y GC+ +F+D+ SL WN+I+ ++
Sbjct: 101 LHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVD 160
Query: 119 HGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
GF D + +F ++ S + +F VI S L G IHG + +GF +
Sbjct: 161 KGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMF 220
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V NSL+ MY C + A ++F + R VVSWNT+I ++ +AL ++ M
Sbjct: 221 VQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDAR 280
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ T V + SC L+ LG +H V KN L+ + V +ALVD Y++C ++ A
Sbjct: 281 VEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEAS 340
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
L F+E K++++W ++I GY + S L +QL G PN T + +L + +
Sbjct: 341 LVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLC 400
Query: 357 LLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L+ LH ++R ++ V+ +L+ YAK +S + ++ R V
Sbjct: 401 CLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTV------- 453
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
WN +++ HN +E + LFK M + ++
Sbjct: 454 -------------------------PWNALLSGLIHNELAREAVGLFKSMLIEEVEANHA 488
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF S++ A + L +L +LH + ++ IS + LIDMY KCGS+ + KIF+E
Sbjct: 489 TFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITG-LIDMYSKCGSLDYAHKIFDE 547
Query: 533 MT--DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ ++++I W+ LI+ G++G + A+ F +M G +P+ + +VL AC H GLV
Sbjct: 548 IPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVD 607
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+G+ LF+ M +Y P +HY CVVDLL R G L EA +I +MPF N IW L
Sbjct: 608 DGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGA 667
Query: 651 C 651
C
Sbjct: 668 C 668
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 144/501 (28%), Positives = 260/501 (51%), Gaps = 18/501 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLL-SCDSLNPVE- 57
+ D ++ +N+II Y G+ DALR+F MI G P ++TF ++ +C ++ +
Sbjct: 143 LSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNV 202
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + L +G F ++ FV +LL +Y G + VF M ++S+V+WN+++S +
Sbjct: 203 GVLIHGRALVSG-FSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWF 261
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G E+ + +F ++ + V ++ V + + ++LE G ++H LV KN ++
Sbjct: 262 QNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIE 321
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+LV+MY +C G+ A +F + + +DV++W ++I + N AL L M +D
Sbjct: 322 VRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDG 381
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN T ++++CA L GKS+HA V++ L+ DV V +AL+D YAKC+ + +
Sbjct: 382 VVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSF 441
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF- 355
F++ S K V WNAL+ G + ++ L +L N TF+ V+ +
Sbjct: 442 QVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILA 501
Query: 356 ---QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL-NIPRAVVPANII 411
Q++ LH ++R G+ + V+ L+ Y+K G + A + N + ++ +++
Sbjct: 502 DLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVL 561
Query: 412 AGIYNRTGQYNETVKLLSQL----ERPDIVSWNIVIAACAHNGDYKEVLELFKYM---RA 464
Y G V L +Q+ +P+ +++ V+ AC+H G + L LFKYM
Sbjct: 562 IAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYP 621
Query: 465 ARIYPDNYT-FVSLLSACSKL 484
+ P++YT V LL +L
Sbjct: 622 SSPLPNHYTCVVDLLGRAGRL 642
>gi|357153657|ref|XP_003576524.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic-like [Brachypodium distachyon]
Length = 809
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 188/662 (28%), Positives = 328/662 (49%), Gaps = 54/662 (8%)
Query: 3 DR-NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQL 61
DR + V +N++IS R A+ MF M+ EP FT+ G+LS ++ GA+L
Sbjct: 131 DRGSAVCWNTVISGAVRNDQDRLAIDMFSDMVRGSCEPNSFTYSGVLSACAM----GAEL 186
Query: 62 QASVLKNGLFCA-----DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+GL D FVGT+++ +Y + G + + F MP +++V+W + ++ F
Sbjct: 187 CVGRAVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMIAAMREFWRMPIRNVVSWTTAIAGF 246
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ + L E+VRS V++ + + ++ S + Q+HG+++K +
Sbjct: 247 VQEEEPVSAVRLLREMVRSGVSMNKYTATSILLACSQMYMIREVSQMHGMIMKKELYLDH 306
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V +L+ Y I +E F++V + W+T I ++ S + ++L+L +RM
Sbjct: 307 AVKEALICTYANIGAIELSETAFEEVGTVSSTRIWSTFISGVS-SHSLPRSLQLLMRMFR 365
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ PN + V +S ++ G+ +H+ VIK+ DV VGSAL Y++ D+LE
Sbjct: 366 QGLRPNDRCYASVFSSMDSIE---FGRQLHSLVIKDGFVHDVLVGSALSTMYSRGDDLED 422
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
++ F E+ ++ VSW A++ G+AS F L ++ L G++P+ T S +L +
Sbjct: 423 SYRVFKEMQERDEVSWTAMVAGFASHGHSVEAFRLFRIMILDGFKPDYVTLSAILSACDK 482
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ L +H I+R+ E +T+++ +
Sbjct: 483 PECLLKGKTIHGHILRVHGE-------------------------ITSIS--------HC 509
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ +Y++ + ++ D V ++ +I+ + NG E + LF+ M + D
Sbjct: 510 LVSMYSKCQEAQTARRIFDATPCKDQVMFSSMISGYSTNGCSAEAMSLFQLMLSTGFQID 569
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ S+LS C+ + G LHG K I+S + + L+ +Y K G++ S K+F
Sbjct: 570 RFICSSILSLCADIARPLYGKLLHGHAIKAGILSDLSVS-SSLVKLYSKSGNLNDSRKVF 628
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+E+T +++TWTA+I +G + ALE F M LG KPD V L++VL+AC GLV
Sbjct: 629 DEITSPDLVTWTAIIDGYAQHGSGRDALEMFDLMITLGVKPDTVVLVSVLSACSRNGLVE 688
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
EG+ FE M YGVEP + HY C+VDLL R G L++A+ I +MP + ++W T
Sbjct: 689 EGVNYFESMRTIYGVEPMLHHYCCMVDLLGRSGRLQDAKSFIESMPMKADLMVWSTLFAA 748
Query: 651 CQ 652
C+
Sbjct: 749 CR 750
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 163/666 (24%), Positives = 303/666 (45%), Gaps = 72/666 (10%)
Query: 25 ALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVEGA-QLQASVLKNGLFCADAFVGTALL 82
AL F+ G P+ FG L +C V A Q+ K+GL DA+V + ++
Sbjct: 53 ALASFVLSRAVGNTPSHLDFGKALAACVGPGHVAFAEQVYCVAWKDGL-TGDAYVCSGMI 111
Query: 83 GLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES 142
L + G ++ + FED R S V WN+++S ++ + +F ++VR
Sbjct: 112 DLLAKSGRFEDALKAFEDGDRGSAVCWNTVISGAVRNDQDRLAIDMFSDMVRGSCEPNSF 171
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
++ GV+ + +L G +HGLV++ +Y++ V S+VNMY + + +A + F +
Sbjct: 172 TYSGVLSACAMGAELCVGRAVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMIAAMREFWRM 231
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
IR+VVSW T I + E A+ L M V N+ T ++ +C+ +
Sbjct: 232 PIRNVVSWTTAIAGFVQEEEPVSAVRLLREMVRSGVSMNKYTATSILLACSQMYMIREVS 291
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS-WNALILGYASK 321
+H ++K L D V AL+ YA +E + F E+ + W+ I G +S
Sbjct: 292 QMHGMIMKKELYLDHAVKEALICTYANIGAIELSETAFEEVGTVSSTRIWSTFISGVSSH 351
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL-LQLHCLIIRMGYENYEYVLGSLM 380
S P S+ LL+ + + G RPN+ ++ V S + + QLH L+I+ G+ ++ ++GS +
Sbjct: 352 SLPRSLQLLMRMFRQGLRPNDRCYASVFSSMDSIEFGRQLHSLVIKDGFV-HDVLVGSAL 410
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
++ +Y+R ++ ++ +++ D VSW
Sbjct: 411 ST-------------------------------MYSRGDDLEDSYRVFKEMQERDEVSWT 439
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
++A A +G E LF+ M PD T ++LSAC K L G ++HG I +
Sbjct: 440 AMVAGFASHGHSVEAFRLFRIMILDGFKPDYVTLSAILSACDKPECLLKGKTIHGHILRV 499
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
T + + L+ MY KC ++ +IF+ ++ + ++++IS NG + A+
Sbjct: 500 H--GEITSISHCLVSMYSKCQEAQTARRIFDATPCKDQVMFSSMISGYSTNGCSAEAMSL 557
Query: 561 FREMEFLGFKPDRVALIAVLTACR-----------HGGLVREGM-----------ELFER 598
F+ M GF+ DR ++L+ C HG ++ G+ +L+ +
Sbjct: 558 FQLMLSTGFQIDRFICSSILSLCADIARPLYGKLLHGHAIKAGILSDLSVSSSLVKLYSK 617
Query: 599 ---MNRSYGV-----EPEMDHYHCVVDLLVRYGHLKEAEK---IITTMPFPPNALIWRTF 647
+N S V P++ + ++D ++G ++A + ++ T+ P+ ++ +
Sbjct: 618 SGNLNDSRKVFDEITSPDLVTWTAIIDGYAQHGSGRDALEMFDLMITLGVKPDTVVLVSV 677
Query: 648 LEGCQR 653
L C R
Sbjct: 678 LSACSR 683
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 134/553 (24%), Positives = 257/553 (46%), Gaps = 41/553 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGG-LLSCDSLNPV-EG 58
MP RNVVS+ + I+ + + A+R+ M+ G ++T LL+C + + E
Sbjct: 231 MPIRNVVSWTTAIAGFVQEEEPVSAVRLLREMVRSGVSMNKYTATSILLACSQMYMIREV 290
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-KSLVTWNSIVSIFG 117
+Q+ ++K L+ D V AL+ Y G ++ + FE++ S W++ +S
Sbjct: 291 SQMHGMIMKKELYL-DHAVKEALICTYANIGAIELSETAFEEVGTVSSTRIWSTFISGVS 349
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
H L + R + + + V S+ +EFG Q+H LVIK+GF +++L
Sbjct: 350 SHSLPRSLQLLM-RMFRQGLRPNDRCYASV---FSSMDSIEFGRQLHSLVIKDGFVHDVL 405
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V ++L MY + + + ++FK+++ RD VSW ++ A + +A L+ M +D
Sbjct: 406 VGSALSTMYSRGDDLEDSYRVFKEMQERDEVSWTAMVAGFASHGHSVEAFRLFRIMILDG 465
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P+ T ++++C + + GK+IH +++ E + LV Y+KC + A
Sbjct: 466 FKPDYVTLSAILSACDKPECLLKGKTIHGHILRVHGEI-TSISHCLVSMYSKCQEAQTAR 524
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL-LQLGYRPNEFTFSHVLRSSLAFQ 356
F K+ V ++++I GY++ L +L L G++ + F S
Sbjct: 525 RIFDATPCKDQVMFSSMISGYSTNGCSAEAMSLFQLMLSTGFQIDRFICS---------S 575
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+L L I R Y G L+ +A K+G++SD + + +Y
Sbjct: 576 ILSLCADIARPLY-------GKLLHGHAIKAGILSDLSVSSSLVK-------------LY 615
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+++G N++ K+ ++ PD+V+W +I A +G ++ LE+F M + PD V
Sbjct: 616 SKSGNLNDSRKVFDEITSPDLVTWTAIIDGYAQHGSGRDALEMFDLMITLGVKPDTVVLV 675
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+LSACS+ + G + ++ + ++D+ G+ G + + M
Sbjct: 676 SVLSACSRNGLVEEGVNYFESMRTIYGVEPMLHHYCCMVDLLGRSGRLQDAKSFIESMPM 735
Query: 536 R-NVITWTALISA 547
+ +++ W+ L +A
Sbjct: 736 KADLMVWSTLFAA 748
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 167/612 (27%), Positives = 299/612 (48%), Gaps = 48/612 (7%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
R G L + MP ++ V+WN++++ + + + ++ +++ +A T +
Sbjct: 88 RAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLAS 147
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
V+ L+ G + HGL +K G D V N L+ MY +C + A ++F + +
Sbjct: 148 VLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPN 207
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA-------GLQNSI 259
VS+ ++G LA+S AL L+ RMS + + V+ +CA + +I
Sbjct: 208 EVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAI 267
Query: 260 -LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
L +SIHA V++ + D VG++L+D YAK ++ A F +S+ +IVSWN L+ GY
Sbjct: 268 RLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGY 327
Query: 319 ASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSL------------------------ 353
+++L+Q G+ PNE T+S++L S +
Sbjct: 328 GQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWN 387
Query: 354 ----AFQLLQLHC----LIIRMGYENYE---YVLGSLMTSYAKSGLISDALAFVTA---L 399
+ +LH L RM ++N + L ++++ ++ G++ +A L
Sbjct: 388 TLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKL 447
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ + A+ + +Y++ GQ + + + D+V WN +I+ A + +E + F
Sbjct: 448 LLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFF 507
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
K MR ++P ++ S++++C++L ++ G +H + K + + +V + LIDMY K
Sbjct: 508 KQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLK-DGYDQNVYVGSSLIDMYAK 566
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
CG++ + FN M +N++ W +I NGF ++A+E F M KPD V IAV
Sbjct: 567 CGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAV 626
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
LT C H GLV E + F M +YG+ P ++HY C++D L R G E +I MP+
Sbjct: 627 LTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKD 686
Query: 640 NALIWRTFLEGC 651
+A++W L C
Sbjct: 687 DAILWEVLLAAC 698
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 227/488 (46%), Gaps = 79/488 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M ++VS+N +++ Y + G E AL + M GFEP + T+ +L SC V A
Sbjct: 312 MSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSA 371
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ ++F+ + + S+ TWN+++S +G+
Sbjct: 372 R-----------------------------------AMFDKISKPSVTTWNTLLSGYGQE 396
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+D + LF + V ++ ++ S LE G+Q+H +K ++ VA
Sbjct: 397 ELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVA 456
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+ L++MY +C + A+ +F + RDVV WN++I LA +A + + +M + +F
Sbjct: 457 SGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMF 516
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P ++++ +INSCA L + G+ IHA+V+K+ + +V+VGS+L+D YAKC N++ A L
Sbjct: 517 PTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLF 576
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLL 358
F+ + KNIV+WN +I GYA L E +L +P+ TF VL
Sbjct: 577 FNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVL--------- 627
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGI 414
T + SGL+ +A+A+ ++ + P +
Sbjct: 628 ----------------------TGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDA 665
Query: 415 YNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACA--HNGDYKEVLELFKYMRAARIYPDN 471
R G++ E V ++ ++ + D + W +++AAC HN + E F R+ P N
Sbjct: 666 LGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGE----FAAKHLFRLDPKN 721
Query: 472 YTFVSLLS 479
+ LLS
Sbjct: 722 PSPYVLLS 729
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 153/378 (40%), Gaps = 77/378 (20%)
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS----------------- 310
V+ L D F+ + LV+ Y+ A F + N+ S
Sbjct: 36 VLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAA 95
Query: 311 --------------WNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAF 355
WN +I A SP + +LQ G P FT + VL + A
Sbjct: 96 RDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAV 155
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L + H L +++G + ++V L+ Y K G ++DA
Sbjct: 156 AALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADA------------------- 196
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
V+L + P+ VS+ ++ A +G + L LF M + I D
Sbjct: 197 -------------VRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDP 243
Query: 472 YTFVSLLSACSKLC----NLA----LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
S+L AC++ C N+A L S+H L+ + + SD V N LIDMY K +
Sbjct: 244 VAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVR-KGFDSDQHVGNSLIDMYAKGMKM 302
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
++K+F M+ ++++W L++ G G +RALE M+ GF+P+ V +L +C
Sbjct: 303 DEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASC 362
Query: 584 RHGGLVREGMELFERMNR 601
V +F+++++
Sbjct: 363 IKARDVPSARAMFDKISK 380
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 129/319 (40%), Gaps = 73/319 (22%)
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVS------------------------------ 438
N + +Y+ +G ++ L RP++ S
Sbjct: 49 NRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAV 108
Query: 439 -WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
WN VIAA A + E LE+++ M + P N+T S+LSAC + L G HGL
Sbjct: 109 SWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLA 168
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
K + + FV N L+ MY KCGS+ +V++F+ M+ N +++TA++ L +G A
Sbjct: 169 VKVG-LDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDA 227
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACR-------------------HGGLVREGMELFER 598
L F M + D VA+ +VL AC H +VR+G + +
Sbjct: 228 LRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQH 287
Query: 599 MNRS----YGVEPEMDHYHCVVD------------LLVRYGHLKEAEKIITTMP------ 636
+ S Y +MD V + L+ YG L E+ + +
Sbjct: 288 VGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESG 347
Query: 637 FPPNALIWRTFLEGCQRCR 655
F PN + + L C + R
Sbjct: 348 FEPNEVTYSNMLASCIKAR 366
>gi|347954472|gb|AEP33736.1| chlororespiratory reduction 21, partial [Raphanus sativus]
Length = 806
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 183/686 (26%), Positives = 337/686 (49%), Gaps = 47/686 (6%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNGL 70
+S+ + G + +AL + M R +G +L + G Q+ A +LKNG
Sbjct: 16 VSSLCKNGEIREALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGRQIHARILKNGE 75
Query: 71 FCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
F A + ++ T L+ Y + + ++F + +++ +W +I+ + + G E + F
Sbjct: 76 FYAKNEYIETKLVIFYAKCDAHEIAETLFSKLRVRNVFSWAAIIGVKCRVGLAEGALMGF 135
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE-LLVANSLVNMYFQ 188
E+++ E+ V Q FG IHG V K+G + + VA+SL +MY +
Sbjct: 136 VEMLKDEIFPDNFVVPNVCKACGALQWSGFGRGIHGYVAKSGLYGDCVFVASSLADMYGK 195
Query: 189 CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYV 248
C + A K+F ++ R+VV+WN ++ ++ +A+ L M + V P + T
Sbjct: 196 CGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTC 255
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+++ A + GK HA + N LE D +G+++++FY K +E A + F + K++
Sbjct: 256 LSASANMCGVGEGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLIEYAEMVFDRMIGKDV 315
Query: 309 VSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL----HCL 363
V+WN LI GY + + +L++L + + T S ++ ++ Q +L C
Sbjct: 316 VTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSAAARTQNSKLGKEVQCY 375
Query: 364 IIRMGYEN------------------------------YEYVL-GSLMTSYAKSGLISDA 392
IR +E+ + +L +L+ +YA+SGL +A
Sbjct: 376 CIRHSFESDIGLASTVIDMYAKCGSIVDAKRVFDSTVQKDLILWNTLLAAYAESGLSGEA 435
Query: 393 LAFVTAL---NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER----PDIVSWNIVIAA 445
L + ++P + N+I R GQ +E ++ Q++ P +VSW ++
Sbjct: 436 LRLFYEMQLESVPPNAITWNLIILSLFRNGQVDEAKEMFLQMQSSGIVPTLVSWTTMMNG 495
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
NG +E + + M+ + + P+ ++ LSAC+ L +L LG S+HG I + ++ SS
Sbjct: 496 LVQNGCSEEAVHYLRKMQESGLRPNVFSITVALSACANLASLHLGRSVHGYIIRNQLHSS 555
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
+ LIDMY KCG I + K+F + + + A+ISA L+G + A++ +R +E
Sbjct: 556 SVSIETALIDMYAKCGDISKAEKVFKRKSYSELPLFNAMISAYALSGNVKEAIDLYRSLE 615
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
+G KPD + VL+AC H G + + +E+F M +G+EP ++HY +VDLL G
Sbjct: 616 DMGIKPDNITFTNVLSACNHAGDINQAIEIFSDMVSKHGMEPCLEHYGLMVDLLASAGET 675
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGC 651
++A +++ MP+ P+A + ++ L C
Sbjct: 676 EKALRLMEEMPYKPDARMIQSLLVTC 701
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 154/564 (27%), Positives = 254/564 (45%), Gaps = 48/564 (8%)
Query: 99 EDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLE 158
+D PR + VS K+G + + + L E+ V + + ++ G E+D
Sbjct: 5 DDQPRNP---YFHRVSSLCKNGEIREALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFH 61
Query: 159 FGEQIHGLVIKNG--FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
G QIH ++KNG + + LV Y +C AE +F + +R+V SW IIG
Sbjct: 62 TGRQIHARILKNGEFYAKNEYIETKLVIFYAKCDAHEIAETLFSKLRVRNVFSWAAIIGV 121
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
AL ++ M D +FP+ V +C LQ S G+ IH V K+ L D
Sbjct: 122 KCRVGLAEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWSGFGRGIHGYVAKSGLYGD 181
Query: 277 -VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELL 334
VFV S+L D Y KC L+ A F EI +N+V+WNAL++GY + +I L+ ++
Sbjct: 182 CVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMR 241
Query: 335 QLGYRPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
+ G P T S L +S + Q H + + G E + S++ Y K GLI
Sbjct: 242 EEGVEPTRVTVSTCLSASANMCGVGEGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLI- 300
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
+Y E V ++ D+V+WN++I+ G
Sbjct: 301 -----------------------------EYAEMV--FDRMIGKDVVTWNLLISGYVQQG 329
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
++ + + K MR ++ D T +L+SA ++ N LG + + SD +
Sbjct: 330 LVEDAIRMCKLMRLEKLKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSF-ESDIGLA 388
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
+ +IDMY KCGSI + ++F+ +++I W L++A +G + AL F EM+
Sbjct: 389 STVIDMYAKCGSIVDAKRVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVP 448
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
P+ + ++ + G V E E+F +M +S G+ P + + +++ LV+ G +EA
Sbjct: 449 PNAITWNLIILSLFRNGQVDEAKEMFLQM-QSSGIVPTLVSWTTMMNGLVQNGCSEEAVH 507
Query: 631 IITTMP---FPPNALIWRTFLEGC 651
+ M PN L C
Sbjct: 508 YLRKMQESGLRPNVFSITVALSAC 531
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 151/661 (22%), Positives = 292/661 (44%), Gaps = 99/661 (14%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE----GA 59
RNV S+ +II R G E AL F+ M+ P F + C + ++ G
Sbjct: 110 RNVFSWAAIIGVKCRVGLAEGALMGFVEMLKDEIFPDNFVVPNV--CKACGALQWSGFGR 167
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ V K+GL+ FV ++L +YG+ G LD+ VF+++P +++V WN+++ + ++
Sbjct: 168 GIHGYVAKSGLYGDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQN 227
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G E+ + L C++ V T + + +N + G+Q H + + NG + + ++
Sbjct: 228 GMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMCGVGEGKQSHAVAVVNGLEMDNILG 287
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
S++N Y + I AE +F + +DVV+WN +I + A+ + M ++ +
Sbjct: 288 TSVLNFYCKVGLIEYAEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLK 347
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
+ T ++++ A QNS LGK + I+++ E D+ + S ++D YAKC ++ A
Sbjct: 348 FDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDIGLASTVIDMYAKCGSIVDAKRV 407
Query: 300 FSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS------- 351
F K+++ WN L+ YA S S ++ L E+ PN T++ ++ S
Sbjct: 408 FDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNAITWNLIILSLFRNGQV 467
Query: 352 -----------------SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS---- 390
+L ++ L+ E + L + S + + S
Sbjct: 468 DEAKEMFLQMQSSGIVPTLVSWTTMMNGLVQNGCSEEAVHYLRKMQESGLRPNVFSITVA 527
Query: 391 -DALAFVTALNIPRAVVPANI--------------IAGIYNRTGQYNETVKLLSQLERPD 435
A A + +L++ R+V I + +Y + G ++ K+ + +
Sbjct: 528 LSACANLASLHLGRSVHGYIIRNQLHSSSVSIETALIDMYAKCGDISKAEKVFKRKSYSE 587
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
+ +N +I+A A +G+ KE ++L++ + I PDN TF ++LSAC+
Sbjct: 588 LPLFNAMISAYALSGNVKEAIDLYRSLEDMGIKPDNITFTNVLSACN------------- 634
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT-----WTALISALGL 550
G I +++IF++M ++ + + ++ L
Sbjct: 635 -----------------------HAGDINQAIEIFSDMVSKHGMEPCLEHYGLMVDLLAS 671
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
G ++AL R ME + +KPD + ++L C EL + ++R +E E D
Sbjct: 672 AGETEKAL---RLMEEMPYKPDARMIQSLLVTCNE----EHKTELVDYLSRQL-LESEPD 723
Query: 611 H 611
+
Sbjct: 724 N 724
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/592 (28%), Positives = 287/592 (48%), Gaps = 38/592 (6%)
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
V GL D F LL +Y + G VF+ +P +++V++ ++V G E+
Sbjct: 455 VRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEE 514
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
LF L + + V+ + L +H K G D V ++L++
Sbjct: 515 ASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALID 574
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
Y C + A ++F + +D V+W ++ +E++ L+++ +M V + N
Sbjct: 575 AYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFA 634
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
V+ + L + +LGK IHA +K + + V AL+D YAKC N+E A L F ++
Sbjct: 635 LTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVT 694
Query: 305 NKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----Q 359
N +++ W+ +I YA + F L I +++ PNEF+ S VL++ LL Q
Sbjct: 695 NDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQ 754
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+H I++G+E+ +V +L+ YAK + +L
Sbjct: 755 IHNHAIKIGHESELFVGNALIDLYAKCSDMESSL-------------------------- 788
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
++ S L + VSWN +I + +G + L +F+ MRAA + T+ S+L
Sbjct: 789 ------EIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLR 842
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
AC+ ++ +H LI+K+ +SDT V N LID Y KCG I + +IF + + +++
Sbjct: 843 ACASTASINHVGQVHCLIEKS-TFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLV 901
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W A+IS ++G A A E F M K + + +A+L+ C GLV +G+ LF+ M
Sbjct: 902 SWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSM 961
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+G+EP M+HY C+V LL R G L +A I +P P+A++WR L C
Sbjct: 962 RLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSC 1013
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 164/620 (26%), Positives = 288/620 (46%), Gaps = 51/620 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL----SCDSLNPV 56
+P+RN+VSF +++ ++ G E+A +F + G E QF +L + D+L
Sbjct: 491 LPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLA 550
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G A L + +AFVG+AL+ Y G + + VF+ + K V W ++VS +
Sbjct: 551 WGVHACACKLGHD---RNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCY 607
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ E+ + +F ++ + L + V+ + G+ IH +K +D E
Sbjct: 608 SENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTER 667
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V +L++MY +C I A F+ V DV+ W+ +I A+ +A EL++RM
Sbjct: 668 HVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRS 727
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN+ + V+ +CA + LGK IH IK E ++FVG+AL+D YAKC ++E +
Sbjct: 728 SVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESS 787
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
FS + + N VSWN +I+GY+ ++ + E+ + T+S VLR+ +
Sbjct: 788 LEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACAST 847
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ Q+HCLI + + + V SL+ SYAK G I DA
Sbjct: 848 ASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAR------------------ 889
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++ L+ D+VSWN +I+ A +G ELF M I ++
Sbjct: 890 --------------EIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKAND 935
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKI 529
TFV+LLS C ++ G SL ++ I S + + C ++ + G+ G + ++
Sbjct: 936 ITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTC--IVRLLGRAGRLNDALNF 993
Query: 530 FNEM-TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
++ + + + W AL+S+ ++ + L +F + L +P +L+
Sbjct: 994 IGDIPSAPSAMVWRALLSSCIVHKNVE--LGRFSAEKVLEIEPQDETTYVLLSNMYSAAG 1051
Query: 589 VREGMELFERMNRSYGVEPE 608
+ + F + R+ GV E
Sbjct: 1052 SLDQVAFFRKSMRNIGVRKE 1071
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
D+Y + LL C + G ++HG +++ + D F N+L++MY K G GS+ +
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
+F+ + +RN++++ L+ L G + A F+ + + G + ++ L VL
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVL 538
>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 198/656 (30%), Positives = 327/656 (49%), Gaps = 46/656 (7%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQ 62
NV +N+II+ R +F M N +P +T+ +L+ C SL + G +Q
Sbjct: 37 NVYCWNTIIAGALRNQNYGAVFDLFHEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQ 96
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
A V+K G D FV T+++ LY + G + E VF + S+V+W ++S + K
Sbjct: 97 ARVIKCG--AEDVFVCTSIVDLYAKCGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDA 154
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ +F E+ S V + + VI + Q+H V K+GF + VA +L
Sbjct: 155 FSALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAAL 214
Query: 183 VNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
++M + I +E++F+D+ +IR N ++ + ++++ GKA+ L+ RM + + P+
Sbjct: 215 ISMNSKSGDINLSERVFEDLDDIRRQNIVNVMVTSFSQNKKPGKAIRLFTRMLQEGLNPD 274
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ + +++ L LGK +H+ +K+ L D+ VGS+L Y+KC +LE ++ F
Sbjct: 275 EFSVCSLLSVLDCLN---LGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQ 331
Query: 302 EISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
EI K+ W ++I G+ +I L E+L G P+E T + VL + L
Sbjct: 332 EIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPR 391
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
++H +R G + + +L+ +Y+K G +L + R V Y+
Sbjct: 392 SKEIHGYTLRAGIDRGMPLGSALVNTYSKCG----------SLKLARKV---------YD 432
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
R L D VS + +I+ + +G ++ LF+ M + D+Y S
Sbjct: 433 R-------------LPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISS 479
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+L A LG+ +H I K + + + V + L+ MY K GSI K F+++
Sbjct: 480 ILKAAVLSEESELGAQVHAYITKIGLCTEPS-VGSSLLTMYSKFGSIEDCCKAFSQINGP 538
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
++I WTALI++ +G A AL+ + M+ GFKPD+V + VL+AC HGGLV EG
Sbjct: 539 DLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHL 598
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M + YG+EPE HY C+VD L R G L+EAE I T P P+AL+W T L C+
Sbjct: 599 NSMVKDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAACK 654
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 221/471 (46%), Gaps = 42/471 (8%)
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
G+ + +V +SL++ + + A K+F+D +V WNTII ++N+G +L+
Sbjct: 2 GYFFYEVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLF 61
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
M P+ T+ V+ +CA L+ GK + A+VIK E DVFV +++VD YAKC
Sbjct: 62 HEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKC 120
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL 349
++ A FS ISN ++VSW ++ GY S + +++ + E+ G N T + V+
Sbjct: 121 GHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVI 180
Query: 350 ----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
R S+ + Q+H + + G+ V +L++ +KSG I
Sbjct: 181 SACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDI---------------- 224
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
N+ ++ L + R +IV N+++ + + N + + LF M
Sbjct: 225 ---NLSERVFED----------LDDIRRQNIV--NVMVTSFSQNKKPGKAIRLFTRMLQE 269
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ PD ++ SLLS L L LG +H K+ +I D V + L MY KCGS+
Sbjct: 270 GLNPDEFSVCSLLSV---LDCLNLGKQVHSYTLKSGLI-LDLTVGSSLFTMYSKCGSLEE 325
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
S +F E+ ++ W ++IS G+ + A+ F EM G PD L AVLT C
Sbjct: 326 SYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSS 385
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+ E+ R+ G++ M +V+ + G LK A K+ +P
Sbjct: 386 LPSLPRSKEIHGYTLRA-GIDRGMPLGSALVNTYSKCGSLKLARKVYDRLP 435
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/513 (24%), Positives = 231/513 (45%), Gaps = 45/513 (8%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK---HGFVEDCMFLFCELV 133
V ++L+ + ++ ++ VF D ++ WN+I++ + +G V D C
Sbjct: 9 VQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGF 68
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
+ + T SS V+ ++ ++L FG+ + VIK G + ++ V S+V++Y +C +
Sbjct: 69 QKPDSYTYSS---VLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMA 124
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
A ++F + VVSW ++ +S + ALE++ M V N T VI++C
Sbjct: 125 EAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACG 184
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF---SEISNKNIVS 310
+HA V K+ D V +AL+ +K ++ + F +I +NIV
Sbjct: 185 RPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIV- 243
Query: 311 WNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGY 369
N ++ ++ P +I L +LQ G P+EF+ +L L CL +G
Sbjct: 244 -NVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSV--------LDCL--NLGK 292
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
+ + Y L KSGLI D + + + +Y++ G E+ L
Sbjct: 293 QVHSYTL--------KSGLILD-------------LTVGSSLFTMYSKCGSLEESYSLFQ 331
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
++ D W +I+ G +E + LF M PD T ++L+ CS L +L
Sbjct: 332 EIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPR 391
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
+HG + I + + L++ Y KCGS+ + K+++ + + + ++ ++LIS
Sbjct: 392 SKEIHGYTLRAG-IDRGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYS 450
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+G Q FR+M GF D A+ ++L A
Sbjct: 451 QHGLVQDGFLLFRDMVMSGFSMDSYAISSILKA 483
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 131/255 (51%), Gaps = 3/255 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
+P ++ + S+IS ++ GY+ +A+ +F M++ G P + T +L+ C SL +
Sbjct: 333 IPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRS 392
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ L+ G+ +G+AL+ Y + G L V++ +P V+ +S++S + +
Sbjct: 393 KEIHGYTLRAGID-RGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQ 451
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG V+D LF ++V S ++ + ++ ++ E G Q+H + K G E V
Sbjct: 452 HGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSV 511
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+SL+ MY + I K F + D+++W +I + A+ +AL++Y M
Sbjct: 512 GSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGF 571
Query: 239 FPNQTTFVYVINSCA 253
P++ TFV V+++C+
Sbjct: 572 KPDKVTFVGVLSACS 586
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 34/229 (14%)
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
MGY YE V SL+ +++K+ L F A + R + AN+
Sbjct: 1 MGYFFYEVVQSSLIDAFSKN------LRFEDAYKVFRDTLSANVYC-------------- 40
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
WN +IA N +Y V +LF M PD+YT+ S+L+AC+ L
Sbjct: 41 ------------WNTIIAGALRNQNYGAVFDLFHEMCNGFQKPDSYTYSSVLAACASLEE 88
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L G + + K + D FVC ++D+Y KCG + + ++F+ +++ +V++WT ++S
Sbjct: 89 LRFGKVVQARVIKCG--AEDVFVCTSIVDLYAKCGHMAEAREVFSRISNPSVVSWTVMLS 146
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+ A ALE FREM G + + + +V++AC +V E ++
Sbjct: 147 GYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQV 195
>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
Length = 691
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/593 (28%), Positives = 289/593 (48%), Gaps = 40/593 (6%)
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
V + G+ D F LL +YG+ G L +F+ MP +++V++ ++V + G E
Sbjct: 86 VRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEA 145
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLE-FGEQIHGLVIKNGFDYELLVANSLV 183
LF L R E + + L+ D +H K G D+ V + L+
Sbjct: 146 AAALFRRL-RWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLI 204
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
+ Y C+ + AE +F + +D V W ++ +E++ A ++ +M V PN
Sbjct: 205 DAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPF 264
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
V+ + L + +LGK IH IK + + VG AL+D YAKC +++ A L F I
Sbjct: 265 ALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMI 324
Query: 304 SNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL---- 358
+++ + +I YA + F L + L++ PNE++ S VL++ L
Sbjct: 325 PYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGK 384
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
Q+H I++G+E+ +V +LM YAK
Sbjct: 385 QIHNHAIKIGHESDLFVGNALMDFYAK--------------------------------C 412
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
+ ++K+ S L + VSWN ++ + +G +E L +F M+AA++ T+ S+L
Sbjct: 413 NDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVL 472
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
AC+ ++ +H I+K+ ++DT + N LID Y KCG I ++K+F + +R++
Sbjct: 473 RACASTASIRHAGQIHCSIEKS-TFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDI 531
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
I+W A+IS L+G A ALE F M + + + +A+L+ C GLV G+ LF+
Sbjct: 532 ISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDS 591
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
M +G++P M+HY C+V LL R G L +A + I +P P+A++WR L C
Sbjct: 592 MRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSC 644
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 160/587 (27%), Positives = 275/587 (46%), Gaps = 59/587 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+RN+VSF +++ A+++ G E A +F + G E QF +L
Sbjct: 122 MPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKL-------AIA 174
Query: 61 LQASVLKNGLF-CA-------DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
+ A+ L G+ CA +AFVG+ L+ Y + + VF + RK V W ++
Sbjct: 175 MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
VS + ++ E+ +F ++ S + V+ + G+ IHG IK
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
D E V +L++MY +C I A F+ + DV+ + +I A+S +A EL+LR
Sbjct: 295 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 354
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ V PN+ + V+ +C + GK IH IK E D+FVG+AL+DFYAKC++
Sbjct: 355 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCND 414
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVLRS 351
++ + FS + + N VSWN +++G++ + +Q P + T+S VLR+
Sbjct: 415 MDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRA 474
Query: 352 SLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ + Q+HC I + + N + SL+ +YAK G I DAL
Sbjct: 475 CASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDAL-------------- 520
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
K+ L DI+SWN +I+ A +G + LELF M + +
Sbjct: 521 ------------------KVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNV 562
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGS 525
++ TFV+LLS CS + G SL ++ I S + + C ++ + G+ G +
Sbjct: 563 ESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTC--IVRLLGRAGRLND 620
Query: 526 SVKIFNEM-TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
+++ ++ + + + W AL+S+ ++ AL +F + L +P
Sbjct: 621 ALQFIGDIPSAPSAMVWRALLSSCIIH--KNVALGRFSAEKILEIEP 665
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 218/483 (45%), Gaps = 40/483 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP--VEGAQL 61
++ V + +++S YS E+A R+F M G +P F +L P V G +
Sbjct: 226 KDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGI 285
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+K L + VG ALL +Y + G + + FE +P ++ + ++S + +
Sbjct: 286 HGCAIKT-LNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQ 344
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E LF L+RS V E S V+ +N L+FG+QIH IK G + +L V N+
Sbjct: 345 NEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNA 404
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L++ Y +C + S+ K+F + + VSWNTI+ ++S +AL ++ M +
Sbjct: 405 LMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCT 464
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
Q T+ V+ +CA + IH + K+ D +G++L+D YAKC + A F
Sbjct: 465 QVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQ 524
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
+ ++I+SWNA+I GYA + L+L R N
Sbjct: 525 HLMERDIISWNAIISGYALHGQAA------DALELFDRMN-------------------- 558
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNR 417
+ E+ + +L++ + +GL++ L+ ++ I + P+ I + R
Sbjct: 559 ----KSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGR 614
Query: 418 TGQYNETVKLLSQLER-PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
G+ N+ ++ + + P + W ++++C + + L F + I P + T
Sbjct: 615 AGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNV--ALGRFSAEKILEIEPQDETTYV 672
Query: 477 LLS 479
LLS
Sbjct: 673 LLS 675
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 173/522 (33%), Positives = 264/522 (50%), Gaps = 45/522 (8%)
Query: 138 ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEK 197
+L++SSF + N H L IK+G + AN++++ Y +C I A K
Sbjct: 6 SLSQSSFTALYRASVN----------HCLAIKSGTTASIYTANNIISGYAKCGEIRIASK 55
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQN 257
MF + RD VSWNT+I NF ALE M + +F ++ A +
Sbjct: 56 MFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGY 115
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
+G+ +H+ ++K E +VF GSAL+D YAKC+ +E A F I+ +N V+WNALI G
Sbjct: 116 VEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISG 175
Query: 318 YASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL----LQLHCLIIRMGYENY 372
YA + F L++ ++L G ++ TF+ +L L Q+H I++ G +
Sbjct: 176 YAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASD 235
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
V +++T+Y++ G I DA V I ET L
Sbjct: 236 TTVCNAIITAYSECGSIEDA----------ERVFDGAI------------ETRDL----- 268
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
D VSWN ++ + +G ++ L+ F+ MR+ + D+Y F ++L +CS L L LG
Sbjct: 269 --DHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQ 326
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+H L+ K+ + FV + LI MY KCG I + K F+ + I W +LI +G
Sbjct: 327 VHVLVLKSGF-EPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHG 385
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY 612
+ AL+ F M+ K D + +AVLTAC H GLV EG + M YG+ P M+HY
Sbjct: 386 RGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHY 445
Query: 613 HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC 654
C++DLL R G L EA+ +I MPF P+A++W+T L C+ C
Sbjct: 446 ACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTC 487
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 229/494 (46%), Gaps = 46/494 (9%)
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
+K+G A + ++ Y + G + +F + ++ V+WN++++ F G E
Sbjct: 25 AIKSGT-TASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFET 83
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ + R A+ SF ++ G++ +E G+Q+H +++K G++ + ++L++
Sbjct: 84 ALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLD 143
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
MY +C + A ++FK + IR+ V+WN +I A+ + G A L M ++ V + T
Sbjct: 144 MYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGT 203
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS--- 301
F ++ L +HAK++K+ L D V +A++ Y++C ++E A F
Sbjct: 204 FAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAI 263
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVLRSSLAFQLLQL 360
E + + VSWN+++ G++ E ++ Y + + FS VLRS LQL
Sbjct: 264 ETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQL 323
Query: 361 ----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
H L+++ G+E +V SL+ Y+K G+I DA
Sbjct: 324 GQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDAR----------------------- 360
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
K + ++WN +I A +G K L+LF M+ R+ D+ TFV+
Sbjct: 361 ---------KSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVA 411
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+L+ACS + + G S ++ I + + C +ID+ G+ G + + + M
Sbjct: 412 VLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYAC--MIDLLGRAGRLDEAKALIEAMP 469
Query: 535 -DRNVITWTALISA 547
+ + + W L+ A
Sbjct: 470 FEPDAMVWKTLLGA 483
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 241/514 (46%), Gaps = 58/514 (11%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL---SCDSLNPVEGAQ 60
R+ VS+N++I+ + G E AL M GF ++FG +L +C V G Q
Sbjct: 63 RDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEV-GQQ 121
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ + ++K G + + F G+ALL +Y + +++ VF+ + ++ VTWN+++S + + G
Sbjct: 122 VHSMMVKMG-YEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVG 180
Query: 121 ------FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
++ DCM L V + + +F ++ L + + Q+H ++K+G
Sbjct: 181 DRGTAFWLLDCMEL------EGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLAS 234
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKD-VEIRDV--VSWNTIIGALAESENFGKALELYL 231
+ V N+++ Y +C I AE++F +E RD+ VSWN+I+ ++S AL+ +
Sbjct: 235 DTTVCNAIITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFE 294
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
M V + F V+ SC+ L LG+ +H V+K+ E + FV S+L+ Y+KC
Sbjct: 295 NMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCG 354
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
+E A F + ++WN+LI GYA R
Sbjct: 355 VIEDARKSFDATPKDSSIAWNSLIFGYAQHG---------------------------RG 387
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN----IPRAVVP 407
+A L L R+ ++ +V +++T+ + GL+ + +F+ ++ IP +
Sbjct: 388 KIALDLFFL-MKDRRVKLDHITFV--AVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEH 444
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
+ + R G+ +E L+ + PD + W ++ AC GD + ++ ++
Sbjct: 445 YACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHL--LE 502
Query: 467 IYPDNY-TFVSLLSACSKLCNLALGSSLHGLIKK 499
+ P+ + T+V L S L +S+ L+K+
Sbjct: 503 LEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKE 536
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQ 60
D + VS+NSI++ +S+ G EDAL+ F M ++ + F +L SC L ++ G Q
Sbjct: 267 DLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQ 326
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ VLK+G F + FV ++L+ +Y + G +++ F+ P+ S + WNS++ + +HG
Sbjct: 327 VHVLVLKSG-FEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHG 385
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
+ + LF + V L +FV V+ S+
Sbjct: 386 RGKIALDLFFLMKDRRVKLDHITFVAVLTACSH 418
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 192/677 (28%), Positives = 323/677 (47%), Gaps = 56/677 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLN-PVEG 58
M R+ +S+NS IS Y G+ + A+ +F M + G E + T +L +C L + G
Sbjct: 259 MHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVG 318
Query: 59 AQLQASVLKNGLFCA--------DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV-TW 109
+ +K+GL D +G+ L+ +Y + G + VF+ MP K V W
Sbjct: 319 KVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVW 378
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTE---SSFVGVIHGLSNEQDLEFGEQIHGL 166
N I+ + K E+ + LF ++ + E S + I LS +D G HG
Sbjct: 379 NLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARD---GLVAHGY 435
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
++K GF + V N+L++ Y + I +A +F + +D +SWN++I + +A
Sbjct: 436 LVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEA 495
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
+EL++RM + + TT + V+ +CA +G+ +H +K L + + +AL+D
Sbjct: 496 IELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDM 555
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTF 345
Y+ C + + F ++ KN+VSW A+I Y + LL E++ G +P+ F
Sbjct: 556 YSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAV 615
Query: 346 SHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
+ VL + L+ +H IR G E V +LM Y V N+
Sbjct: 616 TSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMY------------VNCRNM 663
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
A + + + DI+SWN +I + N E LF
Sbjct: 664 EEARL--------------------VFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSD 703
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M + P+ T +L A + + +L G +H + + D++ N L+DMY KCG
Sbjct: 704 M-LLQFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLE-DSYTSNALVDMYVKCG 761
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
++ + +F+ +T +N+I+WT +I+ G++G + A+ F +M G +PD + A+L
Sbjct: 762 ALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILY 821
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC H GL EG + F M + Y +EP++ HY C+VDLL G+LKEA + I +MP P++
Sbjct: 822 ACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDS 881
Query: 642 LIWRTFLEGCQRCRIAK 658
IW + L GC+ R K
Sbjct: 882 SIWVSLLHGCRIHRDVK 898
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 153/621 (24%), Positives = 273/621 (43%), Gaps = 79/621 (12%)
Query: 1 MPDR-NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--E 57
MP + NV +N I+ Y++ E++L +F M G P + LL C + +
Sbjct: 369 MPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARD 428
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++K G F V AL+ Y + +D V VF+ MP + ++WNS++S
Sbjct: 429 GLVAHGYLVKLG-FGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCT 487
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G + + LF + L ++ + V+ + G +HG +K G E
Sbjct: 488 SNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETS 547
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+AN+L++MY C+ S ++F+++ ++VVSW +I + + F K L M +D
Sbjct: 548 LANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDG 607
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P+ V++ AG ++ GKS+H I+N +E + V +AL++ Y C N+E A
Sbjct: 608 IKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEAR 667
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
L F ++NK+I+SWN LI GY+ + F L + L ++PN T + +L + +
Sbjct: 668 LVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQFKPNTVTMTCILPAVASISS 727
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L ++H +R G+ Y +L+ Y K G AL + R
Sbjct: 728 LERGREIHAYALRRGFLEDSYTSNALVDMYVKCG----------ALLVARV--------- 768
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
L +L + +++SW I+IA +G K+ + LF+ MR + + PD +
Sbjct: 769 -------------LFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTAS 815
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F ++L AC A G ++K I ++D+ G++
Sbjct: 816 FSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLK--------- 866
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
E F +E + +PD +++L CR + +
Sbjct: 867 -------------------------EAFEFIESMPIEPDSSIWVSLLHGCR----IHRDV 897
Query: 594 ELFERM-NRSYGVEPEMDHYH 613
+L E++ +R + +EPE Y+
Sbjct: 898 KLAEKVADRVFKLEPENTGYY 918
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 155/574 (27%), Positives = 268/574 (46%), Gaps = 62/574 (10%)
Query: 50 CDSLNPVEGAQLQASVLKNGLF-CADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK--SL 106
C +E A+ ++++ G + +G L+ Y + G L VF++MP + +
Sbjct: 104 CGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADV 163
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
W S++S + K G ++ + LF ++ V+ + V+ +++ + GE IHGL
Sbjct: 164 RVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGL 223
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
+ K G VAN+L+ +Y +C + A ++F + RD +SWN+ I + +A
Sbjct: 224 LEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRA 283
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV--------- 277
++L+ +M + + T + V+ +CA L ++GK +H +K+ L D+
Sbjct: 284 VDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDE 343
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNK-NIVSWNALILGYASKSS-PTSIFLLIELLQ 335
+GS LV Y KC ++ A F + +K N+ WN ++ GYA + S+ L ++ +
Sbjct: 344 ALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHE 403
Query: 336 LGYRPNEFTFSHVLRS----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
LG P+E S +L+ S A L H ++++G+ V +L++ YAKS +I +
Sbjct: 404 LGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDN 463
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
A V + ++ D +SWN VI+ C NG
Sbjct: 464 A--------------------------------VLVFDRMPHQDTISWNSVISGCTSNGL 491
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
E +ELF M D+ T +S+L AC++ +G +HG KT +I +T + N
Sbjct: 492 NSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIG-ETSLAN 550
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
L+DMY C S+ +IF M +NV++WTA+I++ G + +EM G KP
Sbjct: 551 ALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKP 610
Query: 572 DRVALIAVLTA-----------CRHGGLVREGME 594
D A+ +VL HG +R GME
Sbjct: 611 DVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGME 644
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 172/691 (24%), Positives = 322/691 (46%), Gaps = 65/691 (9%)
Query: 1 MPDR--NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPV- 56
MP R +V + S++SAY++ G ++ + +F M G P +L C SL +
Sbjct: 156 MPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSIT 215
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
EG + + K GL A A V AL+ LY R GC+++ + VF+ M + ++WNS +S +
Sbjct: 216 EGEVIHGLLEKLGLGEACA-VANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGY 274
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF---GEQIHGLVIKNGFD 173
+G+ + + LF ++ TE S V V+ L +L F G+ +HG +K+G
Sbjct: 275 FSNGWHDRAVDLFSKMWSEG---TEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLL 331
Query: 174 YEL---------LVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENF 223
++L + + LV MY +C + SA ++F + + +V WN I+G A++ F
Sbjct: 332 WDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEF 391
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
++L L+ +M + P++ ++ L + G H ++K V +AL
Sbjct: 392 EESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNAL 451
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNE 342
+ FYAK + ++ A L F + +++ +SWN++I G S + +I L + + G+ +
Sbjct: 452 ISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDS 511
Query: 343 FTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNI 401
T VL + ++ + +G ++ Y+ K+GLI + T+L
Sbjct: 512 TTLLSVLPACA----------------RSHYWFVGRVVHGYSVKTGLIGE-----TSL-- 548
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
AN + +Y+ ++ T ++ + + ++VSW +I + G + +V L +
Sbjct: 549 ------ANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQE 602
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M I PD + S+L + +L G S+HG + + V N L++MY C
Sbjct: 603 MVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGM-EKLLPVANALMEMYVNCR 661
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
++ + +F+ +T++++I+W LI N FA + F +M L FKP+ V + +L
Sbjct: 662 NMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDM-LLQFKPNTVTMTCILP 720
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAEKIITTMPFPP 639
A + G E+ R +E D Y + +VD+ V+ G L A + +
Sbjct: 721 AVASISSLERGREIHAYALRRGFLE---DSYTSNALVDMYVKCGALLVARVLFDRLT-KK 776
Query: 640 NALIWRTF-----LEGCQRCRIAKYDTLNST 665
N + W + GC + +A ++ + +
Sbjct: 777 NLISWTIMIAGYGMHGCGKDAVALFEQMRGS 807
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 204/459 (44%), Gaps = 27/459 (5%)
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLV-IKNGFDYELLVANSLVNMYFQC 189
L+ S+ + S+ V+ E+ LE + H LV G ++ LV Y +C
Sbjct: 84 RLLGSDGGVGVRSYCAVVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKC 143
Query: 190 AGIWSAEKMFKDVEIR--DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVY 247
+ A +F ++ R DV W +++ A A++ +F + + L+ +M V P+
Sbjct: 144 GDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSC 203
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
V+ A L + G+ IH + K L V +AL+ Y++C +E A F + ++
Sbjct: 204 VLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARD 263
Query: 308 IVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIR 366
+SWN+ I GY S ++ L ++ G + T VL +
Sbjct: 264 AISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPA------------CAE 311
Query: 367 MGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
+G+E ++G ++ Y+ KSGL+ D + + ++ + + +Y + G
Sbjct: 312 LGFE----LVGKVVHGYSMKSGLLWDLESVQSGID----EALGSKLVFMYVKCGDMGSAR 363
Query: 426 KLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
++ + + ++ WN+++ A +++E L LF+ M I PD + LL + L
Sbjct: 364 RVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCL 423
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
G HG + K + VCN LI Y K I ++V +F+ M ++ I+W ++
Sbjct: 424 SCARDGLVAHGYLVKLGF-GTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSV 482
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
IS NG A+E F M G + D L++VL AC
Sbjct: 483 ISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPAC 521
>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 748
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/571 (29%), Positives = 292/571 (51%), Gaps = 50/571 (8%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F+ MP ++++++NS++S + + GF E M LF E + + L + ++ G + D
Sbjct: 104 LFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCD 163
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L+ GE +HGLV+ NG ++ + N L++MY +C + A +F + RD VSWN++I
Sbjct: 164 LDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISG 223
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVY--VINSCA-GLQNSIL--GKSIHAKVIKN 271
+ L L +M D + N TT+ V+ +C L + G +IH K
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGL--NLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL 281
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY------ASKSSPT 325
+E D+ V +AL+D YAK +L+ A FS + +KN+V++NA+I G+ ++S
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSE 341
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMT 381
+ L +++ + G P+ TFS VL++ A + L Q+H LI + +++ E++ +L+
Sbjct: 342 AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 401
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
YA G D + + + + DI SW
Sbjct: 402 LYALMGSTEDGM--------------------------------QCFASTSKQDIASWTS 429
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I N + +LF+ + ++ I P+ YT ++SAC+ L+ G + G K+
Sbjct: 430 MIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSG 489
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
I + T V I MY K G++ + ++F E+ + +V T++A+IS+L +G A AL F
Sbjct: 490 -IDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIF 548
Query: 562 REMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR 621
M+ G KP++ A + VL AC HGGLV +G++ F+ M Y + P H+ C+VDLL R
Sbjct: 549 ESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGR 608
Query: 622 YGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G L +AE +I + F + + WR L C+
Sbjct: 609 TGRLSDAENLILSSGFQDHPVTWRALLSSCR 639
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 163/629 (25%), Positives = 297/629 (47%), Gaps = 61/629 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+RN++SFNS+IS Y++ G+ E A+ +FL + +FT+ G L C ++ G
Sbjct: 108 MPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG 167
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L V+ NGL F+ L+ +Y + G LD+ +S+F+ + V+WNS++S + +
Sbjct: 168 ELLHGLVVVNGL-SQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVR 226
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS---NEQDLEFGEQIHGLVIKNGFDYE 175
G E+ + L ++ R + LT + V+ NE +E G IH K G +++
Sbjct: 227 VGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFD 286
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE-----SENFGKALELY 230
++V +L++MY + + A K+F + ++VV++N +I + E +A +L+
Sbjct: 287 IVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLF 346
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
+ M + P+ +TF V+ +C+ + G+ IHA + KN + D F+GSAL++ YA
Sbjct: 347 MDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALM 406
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVL 349
+ E CF+ S ++I SW ++I + S F L +L RP E+T S ++
Sbjct: 407 GSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMM 466
Query: 350 RSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+ F L Q+ I+ G + + V S ++ YAKSG N+P A
Sbjct: 467 SACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSG------------NMPLA- 513
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
++ +++ PD+ +++ +I++ A +G E L +F+ M+
Sbjct: 514 -------------------NQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTH 554
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT--FVCNMLIDMYGKCGSI 523
I P+ F+ +L AC + G +K I+ + F C L+D+ G+ G +
Sbjct: 555 GIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTC--LVDLLGRTGRL 612
Query: 524 GSSVK-IFNEMTDRNVITWTALISALGL---NGFAQRALEKFREMEFLGFKPDRVALIAV 579
+ I + + +TW AL+S+ + + +R E+ E+E P+ +
Sbjct: 613 SDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELE-----PEASGSYVL 667
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPE 608
L + V E + R GV+ E
Sbjct: 668 LHNIYNDSGVNSSAEEVRELMRDRGVKKE 696
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/498 (23%), Positives = 222/498 (44%), Gaps = 51/498 (10%)
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
G+ HG +IK+ + L + N+L+NMY +C + A ++F + R+++S+N++I
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ + +A+EL+L + ++ T+ + C + LG+ +H V+ N L VF
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVF 184
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY 338
+ + L+D Y+KC L+ A F ++ VSWN+LI GY
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGY-------------------- 224
Query: 339 RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA---KSGLISDALA- 394
+R A + L L + R G Y LGS++ + G I +A
Sbjct: 225 ----------VRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI 274
Query: 395 --FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+ L + +V + +Y + G E +KL S + ++V++N +I+ +
Sbjct: 275 HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEI 334
Query: 453 -----KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
E +LF M+ + P TF +L ACS L G +H LI K SD
Sbjct: 335 TDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNN-FQSDE 393
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
F+ + LI++Y GS ++ F + +++ +WT++I N + A + FR++
Sbjct: 394 FIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSS 453
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV----VDLLVRYG 623
+P+ + +++AC + G ++ + Y ++ +D + V + + + G
Sbjct: 454 HIRPEEYTVSLMMSACADFAALSSGEQI-----QGYAIKSGIDAFTSVKTSSISMYAKSG 508
Query: 624 HLKEAEKIITTMPFPPNA 641
++ A ++ + P A
Sbjct: 509 NMPLANQVFIEVQNPDVA 526
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 155/353 (43%), Gaps = 52/353 (14%)
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
+LGK H +IK++L +++ + L++ Y KC L A F + +NI+S+N+LI GY
Sbjct: 64 VLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGY 123
Query: 319 ASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGY--ENYEYV 375
++ L +E + + ++FT++ L G+ E +
Sbjct: 124 TQMGFYEQAMELFLEAREANLKLDKFTYAGAL------------------GFCGERCDLD 165
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
LG L+ V + + V N++ +Y++ G+ ++ + L + + D
Sbjct: 166 LGELLH------------GLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERD 213
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN---LALGSS 492
VSWN +I+ G +E L L M + Y S+L AC N + G +
Sbjct: 214 QVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMA 273
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+H K + D V L+DMY K GS+ ++K+F+ M +NV+T+ A+IS G
Sbjct: 274 IHCYTAKLG-MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMIS-----G 327
Query: 553 FAQ----------RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
F Q A + F +M+ G +P VL AC + G ++
Sbjct: 328 FLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 753
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/569 (29%), Positives = 285/569 (50%), Gaps = 46/569 (8%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F+ MP ++++++NS++S + + GF E M LF E + L + ++ G + D
Sbjct: 105 LFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCD 164
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L+FG+ +HGLV+ NG ++ + N L++MY +C + A +F RD VSWN++I
Sbjct: 165 LDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISG 224
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL---GKSIHAKVIKNAL 273
+ L L +M + V+ +C N L G +IH K +
Sbjct: 225 YVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGM 284
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY------ASKSSPTSI 327
E D+ V +AL+D YAK +L+ A FS + KN+V++NA+I G+ ++S +
Sbjct: 285 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAF 344
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSY 383
L +E+ + G P+ TFS VL++ A + L Q+H LI + +++ E++ +L+ Y
Sbjct: 345 KLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELY 404
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
A G D + + + + DI SW +I
Sbjct: 405 ALMGSTEDGM--------------------------------QCFASTSKQDIASWTSII 432
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
N + +LF+ + ++ I P+ YT ++SAC+ L+ G + G K+ I
Sbjct: 433 DCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSG-I 491
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFRE 563
+ T V I MY K G++ + K+F E+ + +V T++A+IS+L +G A AL F
Sbjct: 492 DAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFES 551
Query: 564 MEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYG 623
M+ G KP++ A + VL AC HGGLV G+ F+ M SYG+ P H+ C+ DLL R G
Sbjct: 552 MKTRGIKPNQQAFLGVLIACCHGGLVTHGVNYFQTMKNSYGINPNEKHFTCLADLLGRTG 611
Query: 624 HLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L +AE +I + F + ++WR L C+
Sbjct: 612 RLSDAENLILSSGFQDHPVMWRALLSSCR 640
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 162/629 (25%), Positives = 300/629 (47%), Gaps = 61/629 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+RN++SFNS+IS Y++ G+ E A+ +FL + + +FT+ G L C ++ G
Sbjct: 109 MPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFG 168
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L V+ NGL F+ L+ +Y + G LD+ +S+F+ + V+WNS++S + +
Sbjct: 169 KLLHGLVVVNGL-SQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVR 227
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS---NEQDLEFGEQIHGLVIKNGFDYE 175
G E+ + L ++ R+ + LT + V+ NE +E G IH K G +++
Sbjct: 228 VGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFD 287
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF-----GKALELY 230
++V +L++MY + + A K+F + ++VV++N +I + ++ +A +L+
Sbjct: 288 IVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLF 347
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
+ M + P+ +TF V+ +C+ + G+ IHA + KN + D F+GSAL++ YA
Sbjct: 348 MEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALM 407
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVL 349
+ E CF+ S ++I SW ++I + S F L +L RP E+T S ++
Sbjct: 408 GSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMM 467
Query: 350 RSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+ F L Q+ I+ G + Y V S ++ YAKSG N+P A
Sbjct: 468 SACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSG------------NMPLA- 514
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
K+ +++ PD+ +++ +I++ A +G + L +F+ M+
Sbjct: 515 -------------------NKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESMKTR 555
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT--FVCNMLIDMYGKCGSI 523
I P+ F+ +L AC + G + +K + I+ + F C L D+ G+ G +
Sbjct: 556 GIKPNQQAFLGVLIACCHGGLVTHGVNYFQTMKNSYGINPNEKHFTC--LADLLGRTGRL 613
Query: 524 GSSVK-IFNEMTDRNVITWTALISALGL---NGFAQRALEKFREMEFLGFKPDRVALIAV 579
+ I + + + W AL+S+ + + +R E+ E+E P+ +
Sbjct: 614 SDAENLILSSGFQDHPVMWRALLSSCRVYKDSVIGKRVAERLMELE-----PEASGSYVL 668
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPE 608
L + V E + R GV+ E
Sbjct: 669 LHNIYNDSGVNSSAEEVRELMRDRGVKKE 697
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/519 (23%), Positives = 235/519 (45%), Gaps = 55/519 (10%)
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
AL ++ + + L G+ HG ++K+ + L + N+L+NMY +C + A
Sbjct: 44 TALDSEAYKKLFQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFAR 103
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
++F + R+++S+N++I + + +A+EL+L D + ++ T+ + C
Sbjct: 104 QLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERC 163
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ GK +H V+ N L VF+ + L+D Y+KC L+ A F + ++ VSWN+LI
Sbjct: 164 DLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLIS 223
Query: 317 GYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-------SLAFQLLQLHCLIIRMG 368
GY ++ + LL ++ + G + + VL++ L + + +HC ++G
Sbjct: 224 GYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLG 283
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
E V +L+ YAK+G + +A +KL
Sbjct: 284 MEFDIVVRTALLDMYAKNGSLKEA--------------------------------IKLF 311
Query: 429 SQLERPDIVSWNIVIAACAHNGDY-----KEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
S + ++V++N +I+ D E +LF M+ + P TF +L ACS
Sbjct: 312 SLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSA 371
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
L G +H LI K SD F+ + LI++Y GS ++ F + +++ +WT+
Sbjct: 372 AKTLEYGRQIHALICKNN-FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTS 430
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSY 603
+I N + A + FR++ +P+ + +++AC + G ++ + Y
Sbjct: 431 IIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSGEQI-----QGY 485
Query: 604 GVEPEMDHYHCV----VDLLVRYGHLKEAEKIITTMPFP 638
++ +D Y V + + + G++ A K+ + P
Sbjct: 486 AIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNP 524
>gi|302756227|ref|XP_002961537.1| hypothetical protein SELMODRAFT_626 [Selaginella moellendorffii]
gi|300170196|gb|EFJ36797.1| hypothetical protein SELMODRAFT_626 [Selaginella moellendorffii]
Length = 675
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 172/628 (27%), Positives = 320/628 (50%), Gaps = 36/628 (5%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
EG ++ A + K+G C D+F+ L+ ++GR GC+ + VF+ +P ++ +WN +V+ F
Sbjct: 20 EGRRVHAHISKHG--CRDSFLLNLLVQMFGRFGCVADASRVFDSIPARNCYSWNIMVAAF 77
Query: 117 GKHGFVEDCMFLFCELVRSEVAL-----------TESSFVGVIHGLSNEQDLEFGEQIHG 165
++G ++ F ++ S+ +L +FV VI S+ + ++ G +H
Sbjct: 78 AQNGHLQQARITFDQMPPSDRSLFALMDLDGIRADTITFVSVIDACSSLRRIDLGIAVHV 137
Query: 166 LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG- 224
++G + VA +LV+MY +C + +++MF +E R++V+W +I A A++
Sbjct: 138 EARESGTEMHYAVATALVSMYGKCRRLERSKEMFDRMEERNMVTWTAMITAYAQNAQLDW 197
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
ALE++ M D + P++ FV + +C L + +G+ IH ++ +E ++ V + L+
Sbjct: 198 AALEVFDAMEGDGIRPDKCVFVSALEACGALGDLAVGRKIHRRIATARMEENLIVANGLI 257
Query: 285 DFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA--------SKSSPTSIFLLIELLQ- 335
Y KC +E A F ++++SWN +I YA S P I+ E L
Sbjct: 258 AMYGKCGGVEEARAVFDSTPQRSLLSWNLMIAAYAQNGHPRHCSIGCPRGIWWAEEALAG 317
Query: 336 ------LGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAK 385
G +PN TF +L + + ++ +H I+ + +V SL+T + +
Sbjct: 318 FRIMDLDGIQPNRVTFLSILDACSSLASIEFGRVVHACIVDSCFAGDVHVGTSLVTMFGR 377
Query: 386 SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA 445
+A A A+ + + ++ I +G + L Q+ +++SW +I+A
Sbjct: 378 CEHAQEADAAFHAI-VAKNILAWTAILSANALSGHLDAARMLFDQMPERNVISWTGMISA 436
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
A++G +E +LFK M P+ T++ L AC+ A ++H ++ SS
Sbjct: 437 YAYSGHRREAHDLFKAMDLLGQRPNKITYLKALEACAGGITAAEARTIHAKAIESGY-SS 495
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN-VITWTALISALGLNGFAQRALEKFREM 564
DT V L++++ KCGS+ + ++F+++ +R V+ W+ +ISA +G R+LE F EM
Sbjct: 496 DTQVAVGLLNLFEKCGSLAIAERVFDDLGERKTVVAWSIMISAYAQSGRPWRSLELFTEM 555
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
G P + ++ +L+AC HGG + F M YG+ P +D+Y C+VD+L R G
Sbjct: 556 VQSGVMPTEITVVNLLSACSHGGFLYHSWLFFVSMVGDYGLCPILDNYVCLVDILGRTGQ 615
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L A++++ MP+ PN + W + L C+
Sbjct: 616 LLLAQELLEAMPYEPNDIAWTSLLSSCK 643
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 186/398 (46%), Gaps = 49/398 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVE-DALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEG 58
M +RN+V++ ++I+AY++ ++ AL +F M G P + F L +C +L +
Sbjct: 174 MEERNMVTWTAMITAYAQNAQLDWAALEVFDAMEGDGIRPDKCVFVSALEACGALGDLAV 233
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + + V L+ +YG+ G ++E +VF+ P++SL++WN +++ + +
Sbjct: 234 GRKIHRRIATARMEENLIVANGLIAMYGKCGGVEEARAVFDSTPQRSLLSWNLMIAAYAQ 293
Query: 119 HG--------------FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIH 164
+G + E+ + F + + +F+ ++ S+ +EFG +H
Sbjct: 294 NGHPRHCSIGCPRGIWWAEEALAGFRIMDLDGIQPNRVTFLSILDACSSLASIEFGRVVH 353
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAG-----------------IWS------------- 194
++ + F ++ V SLV M+ +C W+
Sbjct: 354 ACIVDSCFAGDVHVGTSLVTMFGRCEHAQEADAAFHAIVAKNILAWTAILSANALSGHLD 413
Query: 195 -AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
A +F + R+V+SW +I A A S + +A +L+ M + PN+ T++ + +CA
Sbjct: 414 AARMLFDQMPERNVISWTGMISAYAYSGHRREAHDLFKAMDLLGQRPNKITYLKALEACA 473
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS-NKNIVSWN 312
G + ++IHAK I++ D V L++ + KC +L A F ++ K +V+W+
Sbjct: 474 GGITAAEARTIHAKAIESGYSSDTQVAVGLLNLFEKCGSLAIAERVFDDLGERKTVVAWS 533
Query: 313 ALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVL 349
+I YA P S+ L E++Q G P E T ++L
Sbjct: 534 IMISAYAQSGRPWRSLELFTEMVQSGVMPTEITVVNLL 571
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSC-DSLNPVEG 58
MP+RNV+S+ +ISAY+ G+ +A +F M G P + T+ L +C + E
Sbjct: 422 MPERNVISWTGMISAYAYSGHRREAHDLFKAMDLLGQRPNKITYLKALEACAGGITAAEA 481
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM-PRKSLVTWNSIVSIFG 117
+ A +++G + +D V LL L+ + G L VF+D+ RK++V W+ ++S +
Sbjct: 482 RTIHAKAIESG-YSSDTQVAVGLLNLFEKCGSLAIAERVFDDLGERKTVVAWSIMISAYA 540
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
+ G + LF E+V+S V TE + V ++ S+
Sbjct: 541 QSGRPWRSLELFTEMVQSGVMPTEITVVNLLSACSH 576
>gi|302775788|ref|XP_002971311.1| hypothetical protein SELMODRAFT_61689 [Selaginella moellendorffii]
gi|300161293|gb|EFJ27909.1| hypothetical protein SELMODRAFT_61689 [Selaginella moellendorffii]
Length = 604
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 171/584 (29%), Positives = 292/584 (50%), Gaps = 34/584 (5%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D ++G L+ +YG+ G ++E ++VF+ + +++ +W ++ ++G E + LF ++
Sbjct: 15 DTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTENGLSELTLELFRRML 74
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG---FDYELLVANSLVNMYFQCA 190
+ +++GV+ S + LE G Q+ L++ + V SL+N+Y C
Sbjct: 75 LEGIRPDRVAYLGVLKACSELRYLEEGRQVENLLVSGSCFPSSLDAAVLTSLLNLYASCG 134
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-ALELYLRMSVDIVFPNQTTFVYVI 249
+ +A ++F+ +D+V WN+++ A A+ E G+ LE + +M ++ V N +F V+
Sbjct: 135 SLENARRVFESFHEKDLVCWNSMLAAYAKHEKTGRQTLEFFQKMLLEGVAANVVSFTCVV 194
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-NI 308
+C+ + S G IH ++ + L D F+ +ALV+ Y+KC L A F + K ++
Sbjct: 195 GACSRPELSEQGTVIHEQITCSGLVADSFLAAALVNMYSKCGRLGSAWELFQRVDVKMSL 254
Query: 309 VSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRM 367
VSWN+++ +A ++ T + + +LQL G +P+ T VL + Q L+ I+
Sbjct: 255 VSWNSILAAHAQRADLTKVLEIFGMLQLEGLKPSGVTLISVLGGCCSTQALR----IVEH 310
Query: 368 GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
YE A+ G IS L TAL G+ + L
Sbjct: 311 IYERV-----------AQEGEISHDLFLGTALMTSLC------------DCGKLADAESL 347
Query: 428 LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNL 487
+L R + SWN +IA +G + L L M I P+ TF+ ++ ACS L L
Sbjct: 348 FYRLNRWNAASWNTMIAGYVQHGFDLQALHLLYEMDLEGIKPNVVTFLGIVDACSSLAVL 407
Query: 488 ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISA 547
++H I +++ DT + ++ MY C S+ S ++F + R+ ++W A+I+A
Sbjct: 408 GNAKAVHERISASKV-GLDTVLGTAIVSMYANCDSLEDSRRVFESLDLRDTVSWNAVIAA 466
Query: 548 LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
G A + LE FR M G KPD I VL AC H G V + +LF + R + + P
Sbjct: 467 YAEQGHAYQVLESFRCMIHQGLKPDNDTFIFVLHACSHAGSVEQACDLFNSITRDHNLLP 526
Query: 608 EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ HY CV+DLL R G L+ A ++I MP+ PN+L W T L C
Sbjct: 527 AIQHYVCVIDLLGRAGWLENAHELINRMPYQPNSLAWSTLLGAC 570
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 206/449 (45%), Gaps = 42/449 (9%)
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H + + G D + + N LV MY +C + A +F+ ++ R+V SW ++ A E+
Sbjct: 4 HRELQRLGIDQDTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTENGLS 63
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL---ECDVFVG 280
LEL+ RM ++ + P++ ++ V+ +C+ L+ G+ + ++ + D V
Sbjct: 64 ELTLELFRRMLLEGIRPDRVAYLGVLKACSELRYLEEGRQVENLLVSGSCFPSSLDAAVL 123
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS--KSSPTSIFLLIELLQLGY 338
++L++ YA C +LE A F K++V WN+++ YA K+ ++ ++L G
Sbjct: 124 TSLLNLYASCGSLENARRVFESFHEKDLVCWNSMLAAYAKHEKTGRQTLEFFQKMLLEGV 183
Query: 339 RPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
N +F+ V+ R L+ Q +H I SGL++D+
Sbjct: 184 AANVVSFTCVVGACSRPELSEQGTVIHEQI-------------------TCSGLVADSFL 224
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYK 453
+N +Y++ G+ +L +++ + +VSWN ++AA A D
Sbjct: 225 AAALVN-------------MYSKCGRLGSAWELFQRVDVKMSLVSWNSILAAHAQRADLT 271
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
+VLE+F ++ + P T +S+L C L + ++ + + IS D F+ L
Sbjct: 272 KVLEIFGMLQLEGLKPSGVTLISVLGGCCSTQALRIVEHIYERVAQEGEISHDLFLGTAL 331
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+ CG + + +F + N +W +I+ +GF +AL EM+ G KP+
Sbjct: 332 MTSLCDCGKLADAESLFYRLNRWNAASWNTMIAGYVQHGFDLQALHLLYEMDLEGIKPNV 391
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRS 602
V + ++ AC ++ + ER++ S
Sbjct: 392 VTFLGIVDACSSLAVLGNAKAVHERISAS 420
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 177/392 (45%), Gaps = 30/392 (7%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
++ H ++ + ++ D ++G+ LV Y KC +E A F I ++N+ SW L+
Sbjct: 1 RAAHRELQRLGIDQDTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTEN 60
Query: 322 S-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM 380
S ++ L +L G RP+ + VL++ + L+ + EN V GS
Sbjct: 61 GLSELTLELFRRMLLEGIRPDRVAYLGVLKACSELRYLEEGRQV-----ENL-LVSGSCF 114
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
S DA + LN +Y G ++ D+V WN
Sbjct: 115 PSSL------DAAVLTSLLN-------------LYASCGSLENARRVFESFHEKDLVCWN 155
Query: 441 IVIAACA-HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
++AA A H ++ LE F+ M + + +F ++ ACS+ G+ +H I
Sbjct: 156 SMLAAYAKHEKTGRQTLEFFQKMLLEGVAANVVSFTCVVGACSRPELSEQGTVIHEQITC 215
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQRAL 558
+ ++ +D+F+ L++MY KCG +GS+ ++F + + ++++W ++++A + L
Sbjct: 216 SGLV-ADSFLAAALVNMYSKCGRLGSAWELFQRVDVKMSLVSWNSILAAHAQRADLTKVL 274
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDL 618
E F ++ G KP V LI+VL C +R ++ER+ + + ++ ++
Sbjct: 275 EIFGMLQLEGLKPSGVTLISVLGGCCSTQALRIVEHIYERVAQEGEISHDLFLGTALMTS 334
Query: 619 LVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
L G L +AE + + NA W T + G
Sbjct: 335 LCDCGKLADAESLFYRLN-RWNAASWNTMIAG 365
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 158/330 (47%), Gaps = 34/330 (10%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF----GGLLSCDSLNPVEGAQ 60
++VS+NSI++A+++ + L +F + G +P+ T GG S +L VE
Sbjct: 253 SLVSWNSILAAHAQRADLTKVLEIFGMLQLEGLKPSGVTLISVLGGCCSTQALRIVE--H 310
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ V + G D F+GTAL+ G L + S+F + R + +WN++++ + +HG
Sbjct: 311 IYERVAQEGEISHDLFLGTALMTSLCDCGKLADAESLFYRLNRWNAASWNTMIAGYVQHG 370
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F + L E+ + +F+G++ S+ L + +H + + + ++
Sbjct: 371 FDLQALHLLYEMDLEGIKPNVVTFLGIVDACSSLAVLGNAKAVHERISASKVGLDTVLGT 430
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
++V+MY C + + ++F+ +++RD VSWN +I A AE + + LE + M + P
Sbjct: 431 AIVSMYANCDSLEDSRRVFESLDLRDTVSWNAVIAAYAEQGHAYQVLESFRCMIHQGLKP 490
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG--------------SALVDF 286
+ TF++V+++C+ HA ++ A CD+F ++D
Sbjct: 491 DNDTFIFVLHACS-----------HAGSVEQA--CDLFNSITRDHNLLPAIQHYVCVIDL 537
Query: 287 YAKCDNLEGAHLCFSEIS-NKNIVSWNALI 315
+ LE AH + + N ++W+ L+
Sbjct: 538 LGRAGWLENAHELINRMPYQPNSLAWSTLL 567
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 127/264 (48%), Gaps = 5/264 (1%)
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
L I + N++ +Y + G E + + +++ ++ SW I++ AC NG + LEL
Sbjct: 10 LGIDQDTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTENGLSELTLEL 69
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDM 516
F+ M I PD ++ +L ACS+L L G + L+ S D V L+++
Sbjct: 70 FRRMLLEGIRPDRVAYLGVLKACSELRYLEEGRQVENLLVSGSCFPSSLDAAVLTSLLNL 129
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN-GFAQRALEKFREMEFLGFKPDRVA 575
Y CGS+ ++ ++F +++++ W ++++A + ++ LE F++M G + V+
Sbjct: 130 YASCGSLENARRVFESFHEKDLVCWNSMLAAYAKHEKTGRQTLEFFQKMLLEGVAANVVS 189
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
V+ AC L +G + E++ S G+ + +V++ + G L A ++ +
Sbjct: 190 FTCVVGACSRPELSEQGTVIHEQITCS-GLVADSFLAAALVNMYSKCGRLGSAWELFQRV 248
Query: 636 PFPPNALIWRTFLEG-CQRCRIAK 658
+ + W + L QR + K
Sbjct: 249 DVKMSLVSWNSILAAHAQRADLTK 272
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA-QL 61
R+ VS+N++I+AY+ G+ L F MI++G +P TF +L +C VE A L
Sbjct: 455 RDTVSWNAVIAAYAEQGHAYQVLESFRCMIHQGLKPDNDTFIFVLHACSHAGSVEQACDL 514
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKHG 120
S+ ++ ++ L GR G L+ + MP + + + W++++ G +G
Sbjct: 515 FNSITRDHNLLPAIQHYVCVIDLLGRAGWLENAHELINRMPYQPNSLAWSTLLGACGMYG 574
>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
Length = 744
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 164/581 (28%), Positives = 287/581 (49%), Gaps = 41/581 (7%)
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
+Y R G + F+ M +++V+W+++++ + + G D + LF + V +
Sbjct: 1 MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
FV V+ ++ + G+ IH ++ +G ++++ N++VNMY +C + A ++F+ +
Sbjct: 61 FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
E ++ V+WNT+I A + + + +A L M +D + PN+ T V VI++CA +Q+ G+
Sbjct: 121 EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGR 180
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
+H V LE D V +ALV+ Y KC L A I ++ +SW L+ YA
Sbjct: 181 IVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHG 240
Query: 323 -SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMT 381
+I ++ + G + + FTF ++L S +A L L G E ++ +
Sbjct: 241 HGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALAL-------GEEIHDRL------ 287
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL-ERPDIVSWN 440
A+SG+ D + TAL +Y + G + + ++ + D+ WN
Sbjct: 288 --AESGIELDPV-LQTAL------------VDMYGKCGNPDAARRAFDRMRDVRDVTVWN 332
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH------ 494
++AA KE L +F M + PD TF+S+L AC+ L L LG H
Sbjct: 333 ALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLER 392
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF---NEMTDRNVITWTALISALGLN 551
GL + + S+D + +I+MY KCGS+ + F +V+ W+A+++A
Sbjct: 393 GLFDRQAVASADLLTTS-VINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQF 451
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G ++ AL F M+ G KPD V+ ++ + C H GLVRE + F + +G+ P H
Sbjct: 452 GLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAH 511
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ C+VDLL R G ++EAE ++ P + W T L C+
Sbjct: 512 FACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACR 552
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 249/501 (49%), Gaps = 21/501 (4%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
RNVVS++++I+AY++ G+ DAL +F+ M + G + TF +L +C SL + G +
Sbjct: 21 RNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAITFVSVLDACASLGAIALGKSI 80
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
++ +GL D +G ++ +YG+ G +D VFE M K+ VTWN++++ +H
Sbjct: 81 HERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNTVTWNTMIAACSRHDR 140
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ L E+ + + + V VI + Q + G +H +V G + + VAN+
Sbjct: 141 YKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGRIVHEIVAGEGLESDNAVANA 200
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
LVN+Y +C + +A + +E RD +SW T++ A A + +A+ + RM + V +
Sbjct: 201 LVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLD 260
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TFV ++ SC + LG+ IH ++ ++ +E D + +ALVD Y KC N + A F
Sbjct: 261 SFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFD 320
Query: 302 EISN-KNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ 359
+ + +++ WNAL+ Y + + + L G P+ TF +L + + L
Sbjct: 321 RMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALG 380
Query: 360 L----HCLIIRMGYENYEYVLG------SLMTSYAKSGLISDALAFVTALNIPRA--VVP 407
L H ++ G + + V S++ YAK G ++DA A RA VV
Sbjct: 381 LGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVA 440
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+ + Y++ G E ++ ++ +PD VS+ IA C+H+G +E + F +R
Sbjct: 441 WSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLR 500
Query: 464 AAR-IYPDNYTFVSLLSACSK 483
I P F L+ S+
Sbjct: 501 HDHGIAPTEAHFACLVDLLSR 521
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 120/240 (50%), Gaps = 2/240 (0%)
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+YNR G + + ++VSW+ +IAA A G + LELF M + + T
Sbjct: 1 MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FVS+L AC+ L +ALG S+H I ++ D + N +++MYGKCG + + ++F M
Sbjct: 61 FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+N +TW +I+A + + A EM+ G +P+++ L++V+ AC + G
Sbjct: 121 EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGR 180
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ E + G+E + + +V+L + G L+ A + + + + W T L R
Sbjct: 181 IVHE-IVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIE-TRDKISWTTLLAAYAR 238
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 166/579 (28%), Positives = 295/579 (50%), Gaps = 40/579 (6%)
Query: 81 LLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALT 140
L+ +YGR + VF++MP K+ V+W S+++ ++ D + LF ++RS A
Sbjct: 82 LITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPD 141
Query: 141 ESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
+ + + + D+ G Q+H +K+ +L+V N+LV MY + + +F
Sbjct: 142 QFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFG 201
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD-IVFPNQTTFVYVINSCAGLQNSI 259
+ +D +SW +II A+ +AL+++ M + + PN+ F V ++C L +
Sbjct: 202 RMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLE 261
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
G+ IH+ +K L+ + + G +L D YA+C LE A F I ++VSWN++I +
Sbjct: 262 YGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACS 321
Query: 320 SKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEY 374
+ ++ LL E+ G RP+ T +L + + +Q +H ++++G +
Sbjct: 322 VEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVS 381
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
V SL++ YA+ + F +A+++ ++ET
Sbjct: 382 VCNSLLSMYAR------CMDFSSAMDV-------------------FHET-------RDR 409
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
D+V+WN ++ AC + + V +LF ++ + D + ++LSA ++L + +H
Sbjct: 410 DVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVH 469
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISALGLNGF 553
K +++ DT + N LID Y KCGS+ +VK+F M T+ +V +W++LI +G+
Sbjct: 470 TCTFKVGLVN-DTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGY 528
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
++AL+ F M LG +P+ V + VLTAC GLV EG + M +GV P +H
Sbjct: 529 PRKALDLFARMRNLGVRPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCS 588
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
CV+DLL R G L EA K + MPF P+ ++W+T L G +
Sbjct: 589 CVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSK 627
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/559 (26%), Positives = 269/559 (48%), Gaps = 47/559 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP +N VS+ S+I+A+++ DAL +F M+ G P QF G + +C L + G
Sbjct: 102 MPAKNPVSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVG 161
Query: 59 AQLQASVLK--NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
Q+ A +K NG +D V AL+ +Y + G + + +F M K ++W SI++ F
Sbjct: 162 RQVHAQAMKSENG---SDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGF 218
Query: 117 GKHGFVEDCMFLFCELVRSEV-ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ G + + +F E+V + E F V LE+GEQIH L +K D+
Sbjct: 219 AQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHN 278
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
SL +MY +C + SA+++F ++ D+VSWN+II A + +A+ L M
Sbjct: 279 SYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRG 338
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ P+ T ++ +C G G+ +H+ ++K L+ DV V ++L+ YA+C +
Sbjct: 339 SGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSS 398
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVLRSSLA 354
A F E ++++V+WN+++ +F L LLQ + + ++VL +S
Sbjct: 399 AMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAE 458
Query: 355 ---FQLL-QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
F+++ Q+H ++G N + L+ +YAK G + DA
Sbjct: 459 LGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDA------------------ 500
Query: 411 IAGIYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
VKL + D+ SW+ +I A +G ++ L+LF MR + P
Sbjct: 501 --------------VKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRP 546
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
++ TFV +L+ACS++ + G + +++ + C+ +ID+ + G + + K
Sbjct: 547 NHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKF 606
Query: 530 FNEMT-DRNVITWTALISA 547
++M + +++ W L++
Sbjct: 607 VDQMPFEPDIVMWKTLLAG 625
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 218/461 (47%), Gaps = 42/461 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLLS-CDSLNPVE- 57
M +++ +S+ SII+ +++ G +AL++F M+ G P +F FG + S C L +E
Sbjct: 203 MREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEY 262
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ + +K L +++ G +L +Y R L+ VF + LV+WNSI++
Sbjct: 263 GEQIHSLSVKYRLD-HNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACS 321
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + + M L E+ S + + G++ ++ G +H ++K G D ++
Sbjct: 322 VEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVS 381
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V NSL++MY +C SA +F + RDVV+WN+I+ A + ++ +L+ + +
Sbjct: 382 VCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSL 441
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
++ + V+++ A L + K +H K L D + + L+D YAKC +L+ A
Sbjct: 442 PSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAV 501
Query: 298 LCFSEI-SNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F + +N ++ SW++LI+GYA P ++ L + LG RPN TF VL
Sbjct: 502 KLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFVGVL------ 555
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NII 411
T+ ++ GL+ + + + + V+P + +
Sbjct: 556 -------------------------TACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCV 590
Query: 412 AGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
+ R G+ E K + Q+ PDIV W ++A + D
Sbjct: 591 IDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTHND 631
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 213/477 (44%), Gaps = 40/477 (8%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L+ MY +CA SA +F ++ ++ VSW ++I A A++ AL L+ M
Sbjct: 80 NHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSMLRSGTA 139
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+Q + +CA L + +G+ +HA+ +K+ D+ V +ALV Y+K + L
Sbjct: 140 PDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLL 199
Query: 300 FSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQL 357
F + K+ +SW ++I G+A + ++ + E++ G + PNEF F V +
Sbjct: 200 FGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGS 259
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L Q+H L ++ ++ Y SL YA
Sbjct: 260 LEYGEQIHSLSVKYRLDHNSYAGCSLSDMYA----------------------------- 290
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
R + ++ ++ PD+VSWN +I AC+ G E + L MR + + PD T
Sbjct: 291 ---RCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGIT 347
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
LL AC + G +H + K + D VCN L+ MY +C S++ +F+E
Sbjct: 348 VRGLLCACVGCDAIQHGRLMHSYLVKLG-LDGDVSVCNSLLSMYARCMDFSSAMDVFHET 406
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
DR+V+TW ++++A + + + F ++ DR++L VL+A G E +
Sbjct: 407 RDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYF-EMV 465
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ G+ + + ++D + G L +A K+ M + W + + G
Sbjct: 466 KQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVG 522
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 12/257 (4%)
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
N+ R V N + +Y R + ++ + VSW VIAA A N + L LF
Sbjct: 71 NLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLF 130
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
M + PD + S + AC++L ++ +G +H K+E SD V N L+ MY K
Sbjct: 131 SSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSE-NGSDLIVQNALVTMYSK 189
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF-KPDRVALIA 578
G + +F M +++ I+W ++I+ G AL+ FREM G P+ +
Sbjct: 190 SGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGS 249
Query: 579 VLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH----CVVDLLVRYGHLKEAEKIITT 634
V +AC G + G ++ S V+ +DH + D+ R L+ A+++
Sbjct: 250 VFSACGVLGSLEYGEQI-----HSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYG 304
Query: 635 MPFPPNALIWRTFLEGC 651
+ P+ + W + + C
Sbjct: 305 ID-APDLVSWNSIINAC 320
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 481 CSKLCNLALGSSLHG--LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
CS+L L LG +H L + +T + N LI MYG+C + S+ +F+EM +N
Sbjct: 48 CSRLRALCLGCLVHRHLLASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNP 107
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
++W ++I+A N + AL F M G PD+ AL + + AC G + G ++ +
Sbjct: 108 VSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQ 167
Query: 599 MNRS 602
+S
Sbjct: 168 AMKS 171
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 170/593 (28%), Positives = 289/593 (48%), Gaps = 40/593 (6%)
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
V + G+ D F LL +YG+ G L +F+ MP +++V++ ++V + G E
Sbjct: 86 VRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEA 145
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLE-FGEQIHGLVIKNGFDYELLVANSLV 183
LF L R E + + L+ D +H K G D+ V + L+
Sbjct: 146 AAALFRRL-RWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLI 204
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
+ Y C+ + AE +F + +D V W ++ +E++ A ++ +M V PN
Sbjct: 205 DAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPF 264
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
V+ + L + +LGK IH IK + + VG AL+D YAKC +++ A L F I
Sbjct: 265 ALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMI 324
Query: 304 SNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL---- 358
+++ + +I YA + F L + L++ PNE++ S VL++ L
Sbjct: 325 PYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGK 384
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
Q+H I++G+E+ +V +LM YAK
Sbjct: 385 QIHNHAIKIGHESDLFVGNALMDFYAK--------------------------------C 412
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
+ ++K+ S L + VSWN ++ + +G +E L +F M+AA++ T+ S+L
Sbjct: 413 NDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVL 472
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
AC+ ++ +H I+K+ ++DT + N LID Y KCG I ++K+F + +R++
Sbjct: 473 RACASTASIRHAGQIHCSIEKS-TFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDI 531
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
I+W A+IS L+G A ALE F M + + + +A+L+ C GLV G+ LF+
Sbjct: 532 ISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDS 591
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
M +G++P M+HY C+V LL R G L +A + I +P P+A++WR L C
Sbjct: 592 MRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSC 644
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 165/622 (26%), Positives = 286/622 (45%), Gaps = 59/622 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+RN+VSF +++ A+++ G E A +F + G E QF +L
Sbjct: 122 MPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKL-------AIA 174
Query: 61 LQASVLKNGLF-CA-------DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
+ A+ L G+ CA +AFVG+ L+ Y + + VF + RK V W ++
Sbjct: 175 MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
VS + ++ E+ +F ++ S + V+ + G+ IHG IK
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
D E V +L++MY +C I A F+ + DV+ + +I A+S +A EL+LR
Sbjct: 295 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 354
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ V PN+ + V+ +C + GK IH IK E D+FVG+AL+DFYAKC++
Sbjct: 355 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCND 414
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVLRS 351
++ + FS + + N VSWN +++G++ + +Q P + T+S VLR+
Sbjct: 415 MDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRA 474
Query: 352 SLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ + Q+HC I + + N + SL+ +YAK G I DAL
Sbjct: 475 CASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDAL-------------- 520
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
K+ L DI+SWN +I+ A +G + LELF M + +
Sbjct: 521 ------------------KVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNV 562
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGS 525
++ TFV+LLS CS + G SL ++ I S + + C ++ + G+ G +
Sbjct: 563 ESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTC--IVRLLGRAGRLND 620
Query: 526 SVKIFNEM-TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
+++ ++ + + + W AL+S+ ++ AL +F + L +P +L+
Sbjct: 621 ALQFIGDIPSAPSAMVWRALLSSCIIH--KNVALGRFSAEKILEIEPQDETTYVLLSNMY 678
Query: 585 HGGLVREGMELFERMNRSYGVE 606
+ + L + R+ GV
Sbjct: 679 AAAGSLDQVALLRKSMRNIGVR 700
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 147/463 (31%), Positives = 250/463 (53%), Gaps = 9/463 (1%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A K+F +E WN +I LA+S+ A+ Y + + P+ TF +++ +CA
Sbjct: 40 AHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACAR 99
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
+ G+ +H + K L D+FV ++L+ YA C NL A F E+ K++VSWN+L
Sbjct: 100 INALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSL 159
Query: 315 ILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY- 372
I GY+ + I L +L+Q G + ++ T V+ + + ++R E+Y
Sbjct: 160 ICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRY-IEDYC 218
Query: 373 ----EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
Y+ +L+ + + G + A + + R +V N + Y + K+
Sbjct: 219 IEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKV-RNIVTMNAMIAAYAKGQDIVSARKIF 277
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
Q+ + D++SW+ +I+ + + + LE+F+ M+ A++ PD S++S+C+ L L
Sbjct: 278 DQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALD 337
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
LG +H +++ I +DT + N LIDMY KCGS ++++F EM +++ ++W ++I L
Sbjct: 338 LGKWVHEYVRRNNI-KADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGL 396
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
NGF + +L F+ M GF+P+ V + VL AC + LV EG++ FE M R Y +EP+
Sbjct: 397 ANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQ 456
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
M HY CVVDLL R G L++A + IT MP P+ ++WR L C
Sbjct: 457 MKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSC 499
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 221/480 (46%), Gaps = 67/480 (13%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQASVL 66
+N +I ++ DA+ + G P TF +L +C +N + EG Q+ +
Sbjct: 55 WNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHIT 114
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K GL +D FV +L+ LY G L SVF++M K +V+WNS++ + + +D +
Sbjct: 115 KLGLL-SDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDIL 173
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
LF + V + + + V+ + D + + + + ++ + N+LV+ +
Sbjct: 174 ALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYF 233
Query: 187 FQCAGIWSAEKMFKDVEIR-------------------------------DVVSWNTIIG 215
+ + SAEK+F ++++R D++SW+++I
Sbjct: 234 GRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMIS 293
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+++ +F ALE++ +M V P+ V++SCA L LGK +H V +N ++
Sbjct: 294 GYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKA 353
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELL 334
D + ++L+D Y KC + + A F E+ K+ +SWN++I+G A+ S+ L +L
Sbjct: 354 DTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAML 413
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV--LGSLMTSYAKSGLISDA 392
G+RPN TF VL + +L++ G +++E + L SL G + D
Sbjct: 414 TEGFRPNGVTFLGVLIACANAKLVE-------EGLDHFESMKRLYSLEPQMKHYGCVVDL 466
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
L R GQ + ++ ++++ PD V W I++ +C +GD
Sbjct: 467 LG----------------------RAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGD 504
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 222/483 (45%), Gaps = 20/483 (4%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF+ + + WN ++ + D + + + + +F ++ +
Sbjct: 43 VFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINA 102
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L GEQ+H + K G ++ V+NSL+++Y C + A +F ++ ++DVVSWN++I
Sbjct: 103 LNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICG 162
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
++ F L L+ M + V ++ T + V+++C L + + + + +E D
Sbjct: 163 YSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVD 222
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS---SPTSIFLLI-- 331
V++G+ LVD++ + L+ A F + +NIV+ NA+I YA S IF I
Sbjct: 223 VYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPK 282
Query: 332 -ELLQLGYRPNEFTFSHVLRSSLA-FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
+L+ + ++ ++ +L F+ +Q R + V+ S+++S A G +
Sbjct: 283 KDLISWSSMISGYSQANHFSDALEIFRQMQ------RAKVKPDAIVIASVVSSCAHLGAL 336
Query: 390 SDAL---AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
+V NI + N + +Y + G E +++ +++ D +SWN +I
Sbjct: 337 DLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGL 396
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
A+NG KE L LF+ M P+ TF+ +L AC+ + G +K+ +
Sbjct: 397 ANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQ 456
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFR 562
++D+ G+ G + +++ EM D + + W L+ + +G A+ +K
Sbjct: 457 MKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLN 516
Query: 563 EME 565
E+E
Sbjct: 517 ELE 519
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 165/347 (47%), Gaps = 36/347 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQ 62
++VVS+NS+I YS+C +D L +F M N G + + T ++S C L A
Sbjct: 151 KDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYM 210
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLD----------------------------EV 94
+++ D ++G L+ +GR G L ++
Sbjct: 211 VRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDI 270
Query: 95 VS---VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
VS +F+ +P+K L++W+S++S + + D + +F ++ R++V V+
Sbjct: 271 VSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSC 330
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
++ L+ G+ +H V +N + ++ NSL++MY +C A ++FK+++ +D +SWN
Sbjct: 331 AHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWN 390
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
+II LA + ++L L+ M + PN TF+ V+ +CA + G H + +K
Sbjct: 391 SIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLD-HFESMKR 449
Query: 272 --ALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS-NKNIVSWNALI 315
+LE + +VD + LE A +E+ + + V W L+
Sbjct: 450 LYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILL 496
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 85/162 (52%), Gaps = 3/162 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+P ++++S++S+IS YS+ + DAL +F M +P ++S C L ++ G
Sbjct: 280 IPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLG 339
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V +N + AD + +L+ +Y + G E + VF++M K ++WNSI+
Sbjct: 340 KWVHEYVRRNNIK-ADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLAN 398
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
+GF ++ + LF ++ +F+GV+ +N + +E G
Sbjct: 399 NGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEG 440
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 172/559 (30%), Positives = 289/559 (51%), Gaps = 48/559 (8%)
Query: 103 RKSLVTWNSIV---SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF 159
R + WN+++ SI G G +E ++ ++VR V + +F V+ ++ ++
Sbjct: 4 RTTAFLWNTLIRGYSIAGVGGGLE----VYNQMVRIGVRPDDHTFPFVLKACADAFEVRK 59
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA- 218
G ++HG V+K GF+ ++ V N+L++ Y C G+ A ++F ++ +D+VSWNT+IG +
Sbjct: 60 GREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSV 119
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
++ AL+++ M + + PN T + L+ G+ +H I+ LE D+F
Sbjct: 120 NGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIF 179
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLG 337
+ ++L+D YAK + A F ++ KN+VSWNA+I +A ++ ++ L+ ++ G
Sbjct: 180 IANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYG 239
Query: 338 YRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
PN TF++VL R L ++H I MG +V +L YAKSG
Sbjct: 240 ELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSG------ 293
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
L + R V ++ D VS+NI+I + D
Sbjct: 294 ----HLKLARNVFDTSL-----------------------RDEVSYNILIVGHSQTSDCS 326
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
E L LF M+ + DN +F+ LSAC+ L + G +HG + + ++ FV N L
Sbjct: 327 ESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLR-KLFHIHLFVANSL 385
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+D Y KCG IG + IF+ MT+++V +W +I G+ G A++ F M + D
Sbjct: 386 LDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDS 445
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
V+ IAVL+AC HGGL+ +G + F+ + ++ G+EP HY C+VDLL R G ++EA ++I
Sbjct: 446 VSFIAVLSACSHGGLLEKGRKYFDEL-KARGIEPTQMHYACMVDLLGRAGLMEEAAELIK 504
Query: 634 TMPFPPNALIWRTFLEGCQ 652
+P P+A IW L C+
Sbjct: 505 GLPIVPDANIWGALLGACR 523
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 157/562 (27%), Positives = 272/562 (48%), Gaps = 63/562 (11%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVL 66
+N++I YS G V L ++ M+ G P TF +L D+ +G ++ SV+
Sbjct: 10 WNTLIRGYSIAG-VGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF-VEDC 125
K G F +D FVG LL YG G L + VF++MP K LV+WN+++ +F +G+ D
Sbjct: 69 KLG-FESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDA 127
Query: 126 MFLFCELVRSEV---ALTESSFVGVIHGLSNEQDLEF---GEQIHGLVIKNGFDYELLVA 179
+ +F ++ + ++T SSF+ V+ +LEF G ++HG I+ G + ++ +A
Sbjct: 128 LDMFRLMIDEGLKPNSITISSFLPVL------VELEFFKAGREVHGSSIRMGLESDIFIA 181
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
NSL++MY + A +F ++ ++VVSWN +I A++ A+ L +M
Sbjct: 182 NSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGEL 241
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN TF V+ +CA + GK IHA+ I D+FV +AL D YAK +L+ A
Sbjct: 242 PNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNV 301
Query: 300 FSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRS----SLA 354
F + S ++ VS+N LI+G++ S S+ L E+ +G + + +F L + +
Sbjct: 302 F-DTSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAI 360
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q ++H ++R + + +V SL+ Y K G I + I
Sbjct: 361 KQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIG-------------------LARNI 401
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
++R + D+ SWN +I G+ ++LF+ MR + D+ +F
Sbjct: 402 FDR-------------MTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSF 448
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDT-FVCNMLIDMYGKCGSIGSSVKIFNEM 533
+++LSACS L G +K I + + C ++D+ G+ G + + ++ +
Sbjct: 449 IAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYAC--MVDLLGRAGLMEEAAELIKGL 506
Query: 534 ---TDRNVITWTALISALGLNG 552
D N+ W AL+ A + G
Sbjct: 507 PIVPDANI--WGALLGACRIYG 526
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 230/489 (47%), Gaps = 47/489 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGY-VEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE-- 57
MP++++VS+N++I +S G+ DAL MF MI+ G +P T L L +E
Sbjct: 102 MPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPV--LVELEFF 159
Query: 58 --GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G ++ S ++ GL +D F+ +L+ +Y + G E +VF + K++V+WN++++
Sbjct: 160 KAGREVHGSSIRMGL-ESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIAN 218
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
F ++ F + L ++ +F V+ + + G++IH I G ++
Sbjct: 219 FAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFD 278
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L V+N+L +MY + + A +F D +RD VS+N +I +++ + ++L L+ M +
Sbjct: 279 LFVSNALTDMYAKSGHLKLARNVF-DTSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQL 337
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ + +F+ +++CA L GK IH +++ +FV ++L+DFY KC +
Sbjct: 338 MGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGL 397
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
A F ++NK++ SWN +ILGY + L E + R ++
Sbjct: 398 ARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENM----RKDDVE----------- 442
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI----I 411
Y++ ++ +++++ + GL+ + L R + P + +
Sbjct: 443 -------------YDSVSFI--AVLSACSHGGLLEKGRKYFDELK-ARGIEPTQMHYACM 486
Query: 412 AGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ R G E +L+ L PD W ++ AC G+ + L + + P+
Sbjct: 487 VDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLE--LAAWAAEHLFELKPE 544
Query: 471 NYTFVSLLS 479
+ + +LLS
Sbjct: 545 HSGYYTLLS 553
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 265/515 (51%), Gaps = 45/515 (8%)
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
VI + + L G+Q+H L+I G+ + N LVNMY +C + A K+F + R+
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
+VSW +I L+++ F +A+ + M + P Q F I +CA L + +GK +H
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS 326
+K + ++FVGS L D Y+KC + A F E+ K+ VSW A+I GY+
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190
Query: 327 IFLLIELLQLGYRPNEFTF-SHVLRSSL----AFQLLQ----LHCLIIRMGYENYEYVLG 377
L + + E T HVL S+L A + + +H ++++G+E+ +V
Sbjct: 191 ALLAFKKMI----DEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGN 246
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
+L Y+K+G + A +N+ GI + E ++V
Sbjct: 247 ALTDMYSKAGDMESA---------------SNVF-GIDS---------------ECRNVV 275
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
S+ +I ++ L +F +R I P+ +TF SL+ AC+ L G+ LH +
Sbjct: 276 SYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQV 335
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
K D FV ++L+DMYGKCG + +++ F+E+ D I W +L+S G +G + A
Sbjct: 336 MKINF-DEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDA 394
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
++ F M G KP+ + I++LT C H GLV EG++ F M+++YGV P +HY CV+D
Sbjct: 395 IKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVID 454
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
LL R G LKEA++ I MPF PNA W +FL C+
Sbjct: 455 LLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACR 489
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 137/488 (28%), Positives = 236/488 (48%), Gaps = 43/488 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
MP RN+VS+ ++IS S+ +A+R F M G PTQF F + +C SL +E G
Sbjct: 66 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ LK G+ ++ FVG+ L +Y + G + + VFE+MP K V+W +++ + K
Sbjct: 126 KQMHCLALKFGI-GSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSK 184
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E+ + F +++ EV + + + + +FG +H V+K GF+ ++ V
Sbjct: 185 IGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 244
Query: 179 ANSLVNMYFQCAGIWSAEKMFK-DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
N+L +MY + + SA +F D E R+VVS+ +I E+E K L +++ +
Sbjct: 245 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 304
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ PN+ TF +I +CA G +HA+V+K + D FV S LVD Y KC LE A
Sbjct: 305 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAI 364
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F EI + ++WN+L+ + +I + ++ G +PN TF
Sbjct: 365 QAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFI---------- 414
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIA 412
SL+T + +GL+ + L + +++ VVP + +
Sbjct: 415 ---------------------SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVI 453
Query: 413 GIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+ R G+ E + ++++ P+ W + AC +GD KE+ +L + ++ P N
Sbjct: 454 DLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGD-KEMGKL-AAEKLVKLEPKN 511
Query: 472 YTFVSLLS 479
+ LLS
Sbjct: 512 SGALVLLS 519
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/518 (25%), Positives = 253/518 (48%), Gaps = 43/518 (8%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G QL A ++ G + F+ L+ +Y + G LD + +F+ MP+++LV+W +++S
Sbjct: 24 GKQLHALLICAG-YTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLS 82
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ + + FC + T+ +F I ++ +E G+Q+H L +K G EL
Sbjct: 83 QNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELF 142
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V ++L +MY +C ++ A K+F+++ +D VSW +I ++ F +AL + +M +
Sbjct: 143 VGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEE 202
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V +Q + +C L+ G+S+H+ V+K E D+FVG+AL D Y+K ++E A
Sbjct: 203 VTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESAS 262
Query: 298 LCFSEISN-KNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS---- 351
F S +N+VS+ LI GY ++ + + +EL + G PNEFTFS ++++
Sbjct: 263 NVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQ 322
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ Q QLH ++++ ++ +V L+ Y K GL+ A
Sbjct: 323 AALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA------------------- 363
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++ ++ P ++WN +++ +G K+ +++F+ M + P+
Sbjct: 364 -------------IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNA 410
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+SLL+ CS + G + KT + + +ID+ G+ G + + + N
Sbjct: 411 ITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFIN 470
Query: 532 EMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
M + N W + + A ++G + A EK ++E
Sbjct: 471 RMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLE 508
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 181/415 (43%), Gaps = 43/415 (10%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ +VI + A + GK +HA +I F+ + LV+ Y+KC L+ A F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 301 SEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL- 358
+ +N+VSW A+I G + S +I + G P +F FS +R+ + +
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
Q+HCL ++ G + +V +L Y+K G + DA
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDA----------------------- 160
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
K+ ++ D VSW +I + G+++E L FK M + D +
Sbjct: 161 ---------CKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLC 211
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S L AC L G S+H + K SD FV N L DMY K G + S+ +F ++
Sbjct: 212 STLGACGALKACKFGRSVHSSVVKLG-FESDIFVGNALTDMYSKAGDMESASNVFGIDSE 270
Query: 536 -RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
RNV+++T LI ++ L F E+ G +P+ +++ AC + + +G +
Sbjct: 271 CRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQ 330
Query: 595 LFER-MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
L + M ++ +P + +VD+ + G L++A + + P + W + +
Sbjct: 331 LHAQVMKINFDEDPFVSSI--LVDMYGKCGLLEQAIQAFDEIG-DPTEIAWNSLV 382
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 169/593 (28%), Positives = 287/593 (48%), Gaps = 33/593 (5%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
L AS + + L+ +YGR D VF+ M ++ V+W ++++ ++
Sbjct: 65 HLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQN 124
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
D M LF ++R A E + + + DL G Q+H IK+ L+V
Sbjct: 125 SRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQ 184
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD-IV 238
N+LV MY + + +F+ + +D+ SW +II LA+ AL ++ M + +
Sbjct: 185 NALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMH 244
Query: 239 FPNQTTFVYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN+ F V +C+ + NS+ G+ IH +K L+ + + G +L D YA+C+ L+ A
Sbjct: 245 HPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAM 304
Query: 298 LCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F I + ++VSWN+LI +++ ++ L E+ +P+ T +L + +
Sbjct: 305 KVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVG-- 362
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
C +R G + Y++ K GL D V+ N + +Y
Sbjct: 363 -----CDALRQGRSIHSYLV--------KLGLGGD-------------VMVCNSLISMYT 396
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
R + + + + D+V+WN ++ AC + ++V +LF+ + ++ D + +
Sbjct: 397 RCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNN 456
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TD 535
+LSA ++L + +H K ++S D + N LID Y KCGS+ + K+F M T
Sbjct: 457 VLSASAELGYFEMAKQVHAYAFKVGLVS-DAILSNALIDTYAKCGSLDDANKLFEIMGTG 515
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
R+V +W++LI G+A+ AL+ F M LG KP+ V + VL AC GLV EG
Sbjct: 516 RDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYY 575
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ M YG+ P +H CV+DLL R G L EA K + MPF P+ ++W T L
Sbjct: 576 YSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLL 628
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 270/557 (48%), Gaps = 42/557 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
M DRN VS+ ++I+A+++ DA+ +F M+ G P +F G + +C L + G
Sbjct: 106 MLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLG 165
Query: 59 AQLQASVLK--NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
Q+ A +K NG V AL+ +Y + G + + ++FE + K L +W SI++
Sbjct: 166 RQVHAQAIKSDNG---GHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGL 222
Query: 117 GKHGFVEDCMFLFCELVRSEVA-LTESSFVGVIHGLSNE-QDLEFGEQIHGLVIKNGFDY 174
+ G D + +F E++ + E F V S LE+GEQIHGL +K D
Sbjct: 223 AQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDR 282
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
SL +MY +C + SA K+F +E D+VSWN++I A + +A+ L+ M
Sbjct: 283 NSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMR 342
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ P+ T + ++ +C G G+SIH+ ++K L DV V ++L+ Y +C +
Sbjct: 343 YSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFP 402
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVLRSSL 353
A F E +++++V+WN+++ +F L LL + + ++VL +S
Sbjct: 403 SAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSAS- 461
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIA 412
+GY + + + +YA K GL+SDA + +N +
Sbjct: 462 -----------AELGY----FEMAKQVHAYAFKVGLVSDA-------------ILSNALI 493
Query: 413 GIYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
Y + G ++ KL + D+ SW+ +I A G KE L+LF MR + P++
Sbjct: 494 DTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNH 553
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TFV +L ACS++ + G + +++ I C+ +ID+ + G + + K +
Sbjct: 554 VTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVD 613
Query: 532 EMT-DRNVITWTALISA 547
+M + ++I W L++A
Sbjct: 614 QMPFEPDIIMWNTLLAA 630
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 221/460 (48%), Gaps = 43/460 (9%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLLSCDS--LNPVE-G 58
D+++ S+ SII+ ++ G DAL +F MI G P +F FG + S +N +E G
Sbjct: 209 DKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYG 268
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K L +++ G +L +Y R LD + VF + LV+WNS+++ F
Sbjct: 269 EQIHGLCVKYKLD-RNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSA 327
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + M LF E+ S + + + ++ L G IH ++K G +++V
Sbjct: 328 DGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMV 387
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY +C SA +F + RDVV+WN+I+ A + + +L+ + +
Sbjct: 388 CNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMP 447
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
++ + V+++ A L + K +HA K L D + +AL+D YAKC +L+ A+
Sbjct: 448 SLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANK 507
Query: 299 CFSEI-SNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + + +++ SW++LI+GYA + ++ L + LG +PN TF VL
Sbjct: 508 LFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVL------- 560
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIA 412
+ C ++ GL+ + + + + +VP + +
Sbjct: 561 ---IAC---------------------SRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVI 596
Query: 413 GIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
+ R G+ +E K + Q+ PDI+ WN ++AA + D
Sbjct: 597 DLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHND 636
>gi|302810635|ref|XP_002987008.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
gi|300145173|gb|EFJ11851.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
Length = 694
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 192/674 (28%), Positives = 325/674 (48%), Gaps = 60/674 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
+NV S+ IISAY R + DAL++F M G + T LL +C SL ++ G +
Sbjct: 5 KNVFSWTIIISAYVRADHGSDALQLFRTMNQEGDRADEVTLTTLLGACSSLEDLQQGKMI 64
Query: 62 QASVLKNGLFCADA-----FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ +++ G D VG +L+ +Y + L + +++F+ M +S+ +W +V+ F
Sbjct: 65 HSLIVELGYGEQDGEEQDLMVGNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMVTAF 124
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G ++ + + ++ V +FV ++ S+ +L G +I V +G D +L
Sbjct: 125 AQNGQLQRAIQCYRQMCCDGVDPNAVTFVALLAACSSGGELAAGRKIAARVEASGLDSDL 184
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+V +++VN Y +C + A + F + ++ V+WN +I A +S +A++L+ M +
Sbjct: 185 IVGSAIVNFYGKCGRLDEAREAFDRMPAKNNVTWNGMIAAYVQSGAATQAMDLFATMEDE 244
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI--KNALECDVFVGSALVDFYAKCDNLE 294
V P+ ++ +C+GL++ GK IH+ VI + L+ D V +ALV YA+C +L+
Sbjct: 245 GVVPDAMAVSSILGACSGLES---GKRIHSAVIDRRQELQSDRAVCNALVHMYARCGSLD 301
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSI---FLLIELLQL-GYRPNEFTFSHVL- 349
A L F I +KN VSW +I +A + + I F L + L G P+E T + L
Sbjct: 302 DARLVFLAIPSKNTVSWTTIIAAFAQQENRDDIEAAFQLFREMDLDGVAPSEVTIFYALE 361
Query: 350 ------RSSLAFQLLQLHCLIIRMGYE---NYEYVLGSLMTSYAKSGLISDALAFVTALN 400
R LA LH + G + VL SL+ YA G + DA A
Sbjct: 362 TCSKMDRGGLA-SGRALHTAMDTAGRVELLSSVEVLNSLLDMYASCGSLIDAEAIFFDHL 420
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
+ + V D+VSW +IAA +G L L K
Sbjct: 421 LGKNV-----------------------------DVVSWTNMIAAYVQHGQSSSALLLAK 451
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M + D ++L AC+ +LG LH ++ +S+T V N L+ MYG
Sbjct: 452 KMDLEGVKSDEIAMSTILGACTAHQATSLGRELHRRARELG-YASNTIVGNALVFMYGSW 510
Query: 521 GSIGSSVKIFNEMTDRNVI---TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
G + + ++F E+ + N T+TA+I+ G +AL + EM G +P
Sbjct: 511 GRVDDAARVFQELKNANSPNSNTFTAMIAGYARQGRTLQALSLYNEMNLHGVEPRDATFT 570
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
++ AC H G + + +E F + G+EP +H+ CVVDLL R G ++EAE+++ MP+
Sbjct: 571 SIFQACSHAGFLAKALEHFVFIYDFQGLEPTAEHFGCVVDLLGRSGFVREAEELVLAMPY 630
Query: 638 PPNALIWRTFLEGC 651
P+ + WR+ L C
Sbjct: 631 EPDIVAWRSLLASC 644
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 156/571 (27%), Positives = 264/571 (46%), Gaps = 51/571 (8%)
Query: 103 RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ 162
RK++ +W I+S + + D + LF + + E + ++ S+ +DL+ G+
Sbjct: 4 RKNVFSWTIIISAYVRADHGSDALQLFRTMNQEGDRADEVTLTTLLGACSSLEDLQQGKM 63
Query: 163 IHGLVI------KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
IH L++ ++G + +L+V NSLVNMY +C + A +F ++ R V SW ++ A
Sbjct: 64 IHSLIVELGYGEQDGEEQDLMVGNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMVTA 123
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
A++ +A++ Y +M D V PN TFV ++ +C+ G+ I A+V + L+ D
Sbjct: 124 FAQNGQLQRAIQCYRQMCCDGVDPNAVTFVALLAACSSGGELAAGRKIAARVEASGLDSD 183
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ- 335
+ VGSA+V+FY KC L+ A F + KN V+WN +I Y + T L ++
Sbjct: 184 LIVGSAIVNFYGKCGRLDEAREAFDRMPAKNNVTWNGMIAAYVQSGAATQAMDLFATMED 243
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
G P+ S +L + C + G + V+ + L SD
Sbjct: 244 EGVVPDAMAVSSILGA----------CSGLESGKRIHSAVIDR------RQELQSD---- 283
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN---GDY 452
RAV N + +Y R G ++ + + + VSW +IAA A D
Sbjct: 284 -------RAVC--NALVHMYARCGSLDDARLVFLAIPSKNTVSWTTIIAAFAQQENRDDI 334
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKL--CNLALGSSLHGLIK---KTEIISSDT 507
+ +LF+ M + P T L CSK+ LA G +LH + + E++SS
Sbjct: 335 EAAFQLFREMDLDGVAPSEVTIFYALETCSKMDRGGLASGRALHTAMDTAGRVELLSS-V 393
Query: 508 FVCNMLIDMYGKCGS-IGSSVKIFNEMTDRN--VITWTALISALGLNGFAQRALEKFREM 564
V N L+DMY CGS I + F+ + +N V++WT +I+A +G + AL ++M
Sbjct: 394 EVLNSLLDMYASCGSLIDAEAIFFDHLLGKNVDVVSWTNMIAAYVQHGQSSSALLLAKKM 453
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
+ G K D +A+ +L AC G EL R R G + +V + +G
Sbjct: 454 DLEGVKSDEIAMSTILGACTAHQATSLGRELHRRA-RELGYASNTIVGNALVFMYGSWGR 512
Query: 625 LKEAEKIITTMPFP--PNALIWRTFLEGCQR 653
+ +A ++ + PN+ + + G R
Sbjct: 513 VDDAARVFQELKNANSPNSNTFTAMIAGYAR 543
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 160/616 (25%), Positives = 283/616 (45%), Gaps = 95/616 (15%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINR--------------------------- 35
+++++ NS+++ Y++C + DA+ +F M NR
Sbjct: 80 EQDLMVGNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMVTAFAQNGQLQRAIQCYRQ 139
Query: 36 ----GFEPTQFTFGGLL-SCDSLNPV-EGAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
G +P TF LL +C S + G ++ A V +GL +D VG+A++ YG+ G
Sbjct: 140 MCCDGVDPNAVTFVALLAACSSGGELAAGRKIAARVEASGLD-SDLIVGSAIVNFYGKCG 198
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEV---ALTESSFVG 146
LDE F+ MP K+ VTWN +++ + + G M LF + V A+ SS +G
Sbjct: 199 RLDEAREAFDRMPAKNNVTWNGMIAAYVQSGAATQAMDLFATMEDEGVVPDAMAVSSILG 258
Query: 147 VIHGLSNEQDLEFGEQIHGLVI--KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
G LE G++IH VI + + V N+LV+MY +C + A +F +
Sbjct: 259 ACSG------LESGKRIHSAVIDRRQELQSDRAVCNALVHMYARCGSLDDARLVFLAIPS 312
Query: 205 RDVVSWNTIIGALAESEN---FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL- 260
++ VSW TII A A+ EN A +L+ M +D V P++ T Y + +C+ + L
Sbjct: 313 KNTVSWTTIIAAFAQQENRDDIEAAFQLFREMDLDGVAPSEVTIFYALETCSKMDRGGLA 372
Query: 261 -GKSIHAKVI---KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI---SNKNIVSWNA 313
G+++H + + L V V ++L+D YA C +L A F + N ++VSW
Sbjct: 373 SGRALHTAMDTAGRVELLSSVEVLNSLLDMYASCGSLIDAEAIFFDHLLGKNVDVVSWTN 432
Query: 314 LILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY 372
+I Y +S LL + + L G + +E S +L + A Q L + R E
Sbjct: 433 MIAAYVQHGQSSSALLLAKKMDLEGVKSDEIAMSTILGACTAHQATSLGRELHRRARE-- 490
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
LG YA + ++ +AL F +Y G+ ++ ++ +L+
Sbjct: 491 ---LG-----YASNTIVGNALVF------------------MYGSWGRVDDAARVFQELK 524
Query: 433 R---PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
P+ ++ +IA A G + L L+ M + P + TF S+ ACS LA
Sbjct: 525 NANSPNSNTFTAMIAGYARQGRTLQALSLYNEMNLHGVEPRDATFTSIFQACSHAGFLAK 584
Query: 490 GSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALIS 546
I + + +++ F C ++D+ G+ G + + ++ M + +++ W +L++
Sbjct: 585 ALEHFVFIYDFQGLEPTAEHFGC--VVDLLGRSGFVREAEELVLAMPYEPDIVAWRSLLA 642
Query: 547 ALGLN--GFAQRALEK 560
+ G + G ++RA E+
Sbjct: 643 SCGGSDQGASRRAAEE 658
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 170/361 (47%), Gaps = 57/361 (15%)
Query: 304 SNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLLQ--- 359
S KN+ SW +I Y + L + Q G R +E T + +L + + + LQ
Sbjct: 3 SRKNVFSWTIIISAYVRADHGSDALQLFRTMNQEGDRADEVTLTTLLGACSSLEDLQQGK 62
Query: 360 -LHCLIIRMGY-----ENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+H LI+ +GY E + ++G SL+ YAK ++DA+A
Sbjct: 63 MIHSLIVELGYGEQDGEEQDLMVGNSLVNMYAKCRSLADAIA------------------ 104
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
I++R ++ + SW I++ A A NG + ++ ++ M + P+
Sbjct: 105 -IFDR-------------MKNRSVFSWTIMVTAFAQNGQLQRAIQCYRQMCCDGVDPNAV 150
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TFV+LL+ACS LA G + ++ + + SD V + +++ YGKCG + + + F+
Sbjct: 151 TFVALLAACSSGGELAAGRKIAARVEASG-LDSDLIVGSAIVNFYGKCGRLDEAREAFDR 209
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
M +N +TW +I+A +G A +A++ F ME G PD +A+ ++L AC G
Sbjct: 210 MPAKNNVTWNGMIAAYVQSGAATQAMDLFATMEDEGVVPDAMAVSSILGAC-------SG 262
Query: 593 MELFER-----MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
+E +R ++R ++ + + +V + R G L +A + +P N + W T
Sbjct: 263 LESGKRIHSAVIDRRQELQSDRAVCNALVHMYARCGSLDDARLVFLAIP-SKNTVSWTTI 321
Query: 648 L 648
+
Sbjct: 322 I 322
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 171/618 (27%), Positives = 299/618 (48%), Gaps = 48/618 (7%)
Query: 37 FEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS 96
F+ + L C L V Q+ + +G A+ F+G ++ YG+ G + +
Sbjct: 24 FDSSGHYRDALRQCQDLESVR--QIHDRI--SGAASANVFLGNEIVRAYGKCGSVASARA 79
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
F+ + RK+ +W S+++ + ++G + L+ R ++ + V+ ++ +
Sbjct: 80 AFDAIARKNDYSWGSMLTAYAQNGHYRAALDLY---KRMDLQPNPVVYTTVLGACASIKA 136
Query: 157 LEFGEQIHGLVI-KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
LE G+ IH + G ++++ NSL+ MY +C + A+++F+ + R V SWN +I
Sbjct: 137 LEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIA 196
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
A A+S +F +A+ LY M V+ P+ TF V+++C+ L G+ IHA + E
Sbjct: 197 AYAQSGHFEEAIRLYEDMDVE---PSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTEL 253
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
D+ + +AL+ YA+C L+ A F + +++VSW+A+I +A +Q
Sbjct: 254 DLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQ 313
Query: 336 L-GYRPNEFTFSHVLRSSLAFQLLQLHCLII---RMGYENYEYVLGSLMTSYAKSGLISD 391
L G RPN +TF+ VL L C + R G ++ +LG+
Sbjct: 314 LEGVRPNYYTFASVL----------LACASVGDLRAGRAVHDQILGN------------- 350
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
+V + +Y G +E L Q+E D W ++I + G
Sbjct: 351 --------GYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGH 402
Query: 452 YKEVLELFKYMRAARIYPDNYTFVS-LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
VLEL++ M+ P S ++SAC+ L A H I+ +IS D +
Sbjct: 403 RTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMIS-DFVLA 461
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
L++MY + G++ S+ ++F++M+ R+ + WT LI+ +G AL ++EME G +
Sbjct: 462 TSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAE 521
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
P + + VL AC H GL +G +LF + Y + P + HY C++DLL R G L +AE+
Sbjct: 522 PSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEE 581
Query: 631 IITTMPFPPNALIWRTFL 648
+I MP PN + W + L
Sbjct: 582 LINAMPVEPNDVTWSSLL 599
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/563 (25%), Positives = 274/563 (48%), Gaps = 47/563 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
+N S+ S+++AY++ G+ AL ++ M +P + +L +C S+ +E G +
Sbjct: 87 KNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAI 143
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ + D + +LL +Y + G L++ +FE M +S+ +WN++++ + + G
Sbjct: 144 HSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGH 203
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E+ + L+ ++ +V + +F V+ SN L+ G +IH L+ G + +L + N+
Sbjct: 204 FEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNA 260
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+ MY +C + A K+F+ + RDVVSW+ +I A AE++ F +A+E Y +M ++ V PN
Sbjct: 261 LLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPN 320
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TF V+ +CA + + G+++H +++ N + + G+ALVD Y +L+ A F
Sbjct: 321 YYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFD 380
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
+I N++ W LI GY+ + T + L YR + T + V + + + +
Sbjct: 381 QIENRDEGLWTVLIGGYSKQGHRTGVLEL-------YREMKNT-TKVPATKIIYSCVISA 432
Query: 362 CLII------RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
C + R + + E G+ISD V A + +Y
Sbjct: 433 CASLGAFADARQAHSDIE-----------ADGMISD-------------FVLATSLVNMY 468
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+R G ++ ++ D ++W +IA A +G++ L L+K M P TF+
Sbjct: 469 SRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFM 528
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-T 534
+L ACS G L I+ + + + +ID+ + G + + ++ N M
Sbjct: 529 VVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPV 588
Query: 535 DRNVITWTALISALGLNGFAQRA 557
+ N +TW++L+ A ++ +RA
Sbjct: 589 EPNDVTWSSLLGASRIHKDVKRA 611
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 224/458 (48%), Gaps = 30/458 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
M R+V S+N++I+AY++ G+ E+A+R++ M EP+ TF +LS C +L + +G
Sbjct: 183 MSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQG 239
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ A + G D + ALL +Y R CLD+ +F+ +PR+ +V+W+++++ F +
Sbjct: 240 RKIHALISSRGTEL-DLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAE 298
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
++ + + ++ V +F V+ ++ DL G +H ++ NG+ L+
Sbjct: 299 TDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVN 358
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LV++Y + A +F +E RD W +IG ++ + LELY M
Sbjct: 359 GTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTK 418
Query: 239 FPNQTTFVY--VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
P T +Y VI++CA L + H+ + + + D + ++LV+ Y++ NLE A
Sbjct: 419 VP-ATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESA 477
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVL----RS 351
F ++S+++ ++W LI GYA L + ++L G P+E TF VL +
Sbjct: 478 RQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHA 537
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSY-------AKSGLISDALAFVTALNI-PR 403
L Q QL I +Y + + Y +++G +SDA + A+ + P
Sbjct: 538 GLQEQGKQLFISI------QSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPN 591
Query: 404 AVVPANIIAG--IYNRTGQYNETVKLLSQLERPDIVSW 439
V ++++ I+ + +++L+ D S+
Sbjct: 592 DVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASY 629
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 170/593 (28%), Positives = 289/593 (48%), Gaps = 40/593 (6%)
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
V + G+ D F LL +YG+ G L +F+ MP +++V++ ++V + G E
Sbjct: 86 VRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEA 145
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLE-FGEQIHGLVIKNGFDYELLVANSLV 183
LF L R E + + L+ D +H K G D+ V + L+
Sbjct: 146 AAALFRRL-RWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLI 204
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
+ Y C+ + AE +F + +D V W ++ +E++ A ++ +M V PN
Sbjct: 205 DAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPF 264
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
V+ + L + +LGK IH IK + + VG AL+D YAKC +++ A L F I
Sbjct: 265 ALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMI 324
Query: 304 SNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL---- 358
+++ + +I YA + F L + L++ PNE++ S VL++ L
Sbjct: 325 PYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGK 384
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
Q+H I++G+E+ +V +LM YAK
Sbjct: 385 QIHNHAIKIGHESDLFVGNALMDFYAK--------------------------------C 412
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
+ ++K+ S L + VSWN ++ + +G +E L +F M+AA++ T+ S+L
Sbjct: 413 NDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVL 472
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
AC+ ++ +H I+K+ ++DT + N LID Y KCG I ++K+F + +R++
Sbjct: 473 RACASTASIRHAGQIHCSIEKS-TFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDI 531
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
I+W A+IS L+G A ALE F M + + + +A+L+ C GLV G+ LF+
Sbjct: 532 ISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDS 591
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
M +G++P M+HY C+V LL R G L +A + I +P P+A++WR L C
Sbjct: 592 MRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSC 644
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 165/622 (26%), Positives = 286/622 (45%), Gaps = 59/622 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+RN+VSF +++ A+++ G E A +F + G E QF +L
Sbjct: 122 MPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKL-------AIA 174
Query: 61 LQASVLKNGLF-CA-------DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
+ A+ L G+ CA +AFVG+ L+ Y + + VF + RK V W ++
Sbjct: 175 MDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
VS + ++ E+ +F ++ S + V+ + G+ IHG IK
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
D E V +L++MY +C I A F+ + DV+ + +I A+S +A EL+LR
Sbjct: 295 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 354
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ V PN+ + V+ +C + GK IH IK E D+FVG+AL+DFYAKC++
Sbjct: 355 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCND 414
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVLRS 351
++ + FS + + N VSWN +++G++ + +Q P + T+S VLR+
Sbjct: 415 MDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRA 474
Query: 352 SLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ + Q+HC I + + N + SL+ +YAK G I DAL
Sbjct: 475 CASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDAL-------------- 520
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
K+ L DI+SWN +I+ A +G + LELF M + +
Sbjct: 521 ------------------KVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNV 562
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGS 525
++ TFV+LLS CS + G SL ++ I S + + C ++ + G+ G +
Sbjct: 563 ESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTC--IVRLLGRAGRLND 620
Query: 526 SVKIFNEM-TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
+++ ++ + + + W AL+S+ ++ AL +F + L +P +L+
Sbjct: 621 ALQFIGDIPSAPSAMVWRALLSSCIIH--KNVALGRFSAEKILEIEPQDETTYVLLSNMY 678
Query: 585 HGGLVREGMELFERMNRSYGVE 606
+ + L + R+ GV
Sbjct: 679 AAAGSLDQVALLRKSMRNIGVR 700
>gi|15225505|ref|NP_181492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099847|sp|O80647.1|PP195_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g39620
gi|3355489|gb|AAC27851.1| hypothetical protein [Arabidopsis thaliana]
gi|330254604|gb|AEC09698.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 836
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 192/685 (28%), Positives = 340/685 (49%), Gaps = 57/685 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M ++VV++N+++S ++ G AL +F M + + + L+ +++ +E +
Sbjct: 161 MHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIP--AVSKLEKSD 218
Query: 61 ----LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
L V+K G A + L+ +Y L SVFE++ RK +W ++++ +
Sbjct: 219 VCRCLHGLVIKKGFIFA---FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAY 275
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+GF E+ + LF + +V + + + + + DL G IH ++ G ++
Sbjct: 276 AHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDV 335
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VA SL++MY +C + AE++F ++E RDVVSW+ +I + ++ +A+ L+ M
Sbjct: 336 SVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRI 395
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ PN T V+ CAG+ S LGKSIH IK +E ++ +A++ YAKC A
Sbjct: 396 HIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPA 455
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS-SLA 354
F + K+ V++NAL GY F + + ++L G P+ T +L++ +
Sbjct: 456 LKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFC 515
Query: 355 FQLLQLHCL---IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ C+ II+ G+++ +V +L+ + K DALA L
Sbjct: 516 SDYARGSCVYGQIIKHGFDSECHVAHALINMFTK----CDALAAAIVL------------ 559
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+++ G TV SWNI++ +G +E + F+ M+ + P+
Sbjct: 560 ---FDKCGFEKSTV------------SWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNA 604
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TFV+++ A ++L L +G S+H + + S T V N L+DMY KCG I SS K F
Sbjct: 605 VTFVNIVRAAAELSALRVGMSVHSSLIQCG-FCSQTPVGNSLVDMYAKCGMIESSEKCFI 663
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
E++++ +++W ++SA +G A A+ F M+ KPD V+ ++VL+ACRH GLV E
Sbjct: 664 EISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEE 723
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G +FE M + +E E++HY C+VDLL + G EA +++ M + +W L
Sbjct: 724 GKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSS 783
Query: 652 QR-----------CRIAKYDTLNST 665
+ C++ K + LN +
Sbjct: 784 RMHCNLWLSNAALCQLVKLEPLNPS 808
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 169/637 (26%), Positives = 318/637 (49%), Gaps = 46/637 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFG-GLLSC-DSLNPVEGA 59
D VV +NS+I Y+R G +AL F YM +G +P +++F L +C S++ +G
Sbjct: 61 DPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGL 120
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ + + GL +D ++GTAL+ +Y + L VF+ M K +VTWN++VS ++
Sbjct: 121 RIHDLIAEMGLE-SDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQN 179
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + LF ++ V + S +I +S + + +HGLVIK GF + +
Sbjct: 180 GCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAF--S 237
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+ L++MY CA +++AE +F++V +D SW T++ A A + F + LEL+ M V
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVR 297
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
N+ + + A + + + G +IH ++ L DV V ++L+ Y+KC LE A
Sbjct: 298 MNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQL 357
Query: 300 FSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F I ++++VSW+A+I Y + +I L +++++ +PN T + VL+
Sbjct: 358 FINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAAS 417
Query: 359 QL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+L HC I+ E+ ++++ YAK G S AL
Sbjct: 418 RLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPAL--------------------- 456
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
K +L D V++N + GD + +++K M+ + PD+ T
Sbjct: 457 -----------KAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTM 505
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
V +L C+ + A GS ++G I K S+ V + LI+M+ KC ++ +++ +F++
Sbjct: 506 VGMLQTCAFCSDYARGSCVYGQIIKHG-FDSECHVAHALINMFTKCDALAAAIVLFDKCG 564
Query: 535 -DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+++ ++W +++ L+G A+ A+ FR+M+ F+P+ V + ++ A +R GM
Sbjct: 565 FEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGM 624
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
+ + + G + + +VD+ + G ++ +EK
Sbjct: 625 SVHSSLIQC-GFCSQTPVGNSLVDMYAKCGMIESSEK 660
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/556 (22%), Positives = 244/556 (43%), Gaps = 34/556 (6%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQ 155
+F+ + +V WNS++ + + G + + F + + + + SF + +
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
D + G +IH L+ + G + ++ + +LV MY + + SA ++F + ++DVV+WNT++
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
LA++ AL L+ M V + + +I + + L+ S + + +H VIK
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF-- 232
Query: 276 DVFV-GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
+F S L+D Y C +L A F E+ K+ SW ++ YA + L +L+
Sbjct: 233 -IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLM 291
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
R + + V +S + L+ + +Y + GLI D
Sbjct: 292 ----RNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYA----------VQQGLIGD--- 334
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
V A + +Y++ G+ +L +E D+VSW+ +IA+ G + E
Sbjct: 335 ----------VSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDE 384
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
+ LF+ M I P+ T S+L C+ + LG S+H K + I S+ +I
Sbjct: 385 AISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD-IESELETATAVI 443
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
MY KCG ++K F + ++ + + AL G A +A + ++ M+ G PD
Sbjct: 444 SMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSR 503
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
++ +L C G ++ ++ + +G + E H ++++ + L A +
Sbjct: 504 TMVGMLQTCAFCSDYARGSCVYGQIIK-HGFDSECHVAHALINMFTKCDALAAAIVLFDK 562
Query: 635 MPFPPNALIWRTFLEG 650
F + + W + G
Sbjct: 563 CGFEKSTVSWNIMMNG 578
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 222/493 (45%), Gaps = 43/493 (8%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMY--FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
Q+HG +I +G L N L+N Y FQ + + +F V VV WN++I
Sbjct: 23 QVHGSLIVSG----LKPHNQLINAYSLFQRQDL--SRVIFDSVRDPGVVLWNSMIRGYTR 76
Query: 220 SENFGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ +AL + MS + + P++ +F + + +CAG + G IH + + LE DV+
Sbjct: 77 AGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVY 136
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY 338
+G+ALV+ Y K +L A F ++ K++V+WN ++ G A ++ LL
Sbjct: 137 IGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLF------- 189
Query: 339 RPNEFTFSHVLRS-SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
H +RS + + L+ LI + V L K G I AF +
Sbjct: 190 --------HDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI---FAFSS 238
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
L +Y + ++ R D SW ++AA AHNG ++EVLE
Sbjct: 239 GL------------IDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLE 286
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
LF MR + + S L A + + +L G ++H + +I D V L+ MY
Sbjct: 287 LFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLI-GDVSVATSLMSMY 345
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
KCG + + ++F + DR+V++W+A+I++ G A+ FR+M + KP+ V L
Sbjct: 346 SKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLT 405
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
+VL C R G + ++ +E E++ V+ + + G A K +P
Sbjct: 406 SVLQGCAGVAASRLGKSIHCYAIKA-DIESELETATAVISMYAKCGRFSPALKAFERLPI 464
Query: 638 PPNALIWRTFLEG 650
+A+ + +G
Sbjct: 465 -KDAVAFNALAQG 476
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 265/515 (51%), Gaps = 45/515 (8%)
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
VI + + L G+Q+H L+I G+ + N LVNMY +C + A K+F + R+
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
+VSW +I L+++ F +A+ + M + P Q F I +CA L + +GK +H
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS 326
+K + ++FVGS L D Y+KC + A F E+ K+ VSW A+I GY+
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190
Query: 327 IFLLIELLQLGYRPNEFTF-SHVLRSSL----AFQLLQ----LHCLIIRMGYENYEYVLG 377
L + + E T HVL S+L A + + +H ++++G+E+ +V
Sbjct: 191 ALLAFKKMI----DEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGN 246
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
+L Y+K+G + A +N+ GI + E ++V
Sbjct: 247 ALTDMYSKAGDMESA---------------SNVF-GIDS---------------ECRNVV 275
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
S+ +I ++ L +F +R I P+ +TF SL+ AC+ L G+ LH +
Sbjct: 276 SYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQV 335
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
K D FV ++L+DMYGKCG + +++ F+E+ D I W +L+S G +G + A
Sbjct: 336 MKINF-DEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDA 394
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
++ F M G KP+ + I++LT C H GLV EG++ F M+++YGV P +HY CV+D
Sbjct: 395 IKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVID 454
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
LL R G LKEA++ I MPF PNA W +FL C+
Sbjct: 455 LLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACR 489
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/488 (28%), Positives = 235/488 (48%), Gaps = 43/488 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
MP RN+VS+ ++IS S+ +A+R F M G PTQF F + +C SL +E G
Sbjct: 66 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ LK G+ ++ FVG+ L +Y + G + + VFE+MP K V+W +++ + K
Sbjct: 126 KQMHCLALKFGI-GSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSK 184
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E+ + F +++ EV + + + + +FG +H V+K GF+ ++ V
Sbjct: 185 IGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 244
Query: 179 ANSLVNMYFQCAGIWSAEKMFK-DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
N+L +MY + + SA +F D E R+VVS+ +I E+E K L +++ +
Sbjct: 245 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 304
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ PN+ TF +I +CA G +HA+V+K + D FV S LVD Y KC LE A
Sbjct: 305 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAI 364
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F EI + ++WN+L+ + +I ++ G +PN TF
Sbjct: 365 QAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFI---------- 414
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIA 412
SL+T + +GL+ + L + +++ VVP + +
Sbjct: 415 ---------------------SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVI 453
Query: 413 GIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+ R G+ E + ++++ P+ W + AC +GD KE+ +L + ++ P N
Sbjct: 454 DLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGD-KEMGKL-AAEKLVKLEPKN 511
Query: 472 YTFVSLLS 479
+ LLS
Sbjct: 512 SGALVLLS 519
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/518 (25%), Positives = 252/518 (48%), Gaps = 43/518 (8%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G QL A ++ G + F+ L+ +Y + G LD + +F+ MP+++LV+W +++S
Sbjct: 24 GKQLHALLICAG-YTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLS 82
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ + + FC + T+ +F I ++ +E G+Q+H L +K G EL
Sbjct: 83 QNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELF 142
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V ++L +MY +C ++ A K+F+++ +D VSW +I ++ F +AL + +M +
Sbjct: 143 VGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEE 202
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V +Q + +C L+ G+S+H+ V+K E D+FVG+AL D Y+K ++E A
Sbjct: 203 VTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESAS 262
Query: 298 LCFSEISN-KNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS---- 351
F S +N+VS+ LI GY ++ + + +EL + G PNEFTFS ++++
Sbjct: 263 NVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQ 322
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ Q QLH ++++ ++ +V L+ Y K GL+ A
Sbjct: 323 AALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHA------------------- 363
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++ ++ P ++WN +++ +G K+ ++ F+ M + P+
Sbjct: 364 -------------IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNA 410
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+SLL+ CS + G + KT + + +ID+ G+ G + + + N
Sbjct: 411 ITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFIN 470
Query: 532 EMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
M + N W + + A ++G + A EK ++E
Sbjct: 471 RMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLE 508
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 180/415 (43%), Gaps = 43/415 (10%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ +VI + A + GK +HA +I F+ + LV+ Y+KC L+ A F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 301 SEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL- 358
+ +N+VSW A+I G + S +I + G P +F FS +R+ + +
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
Q+HCL ++ G + +V +L Y+K G + DA
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDA----------------------- 160
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
K+ ++ D VSW +I + G+++E L FK M + D +
Sbjct: 161 ---------CKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLC 211
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S L AC L G S+H + K SD FV N L DMY K G + S+ +F ++
Sbjct: 212 STLGACGALKACKFGRSVHSSVVKLG-FESDIFVGNALTDMYSKAGDMESASNVFGIDSE 270
Query: 536 -RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
RNV+++T LI ++ L F E+ G +P+ +++ AC + + +G +
Sbjct: 271 CRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQ 330
Query: 595 LFER-MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
L + M ++ +P + +VD+ + G L+ A + + P + W + +
Sbjct: 331 LHAQVMKINFDEDPFVSSI--LVDMYGKCGLLEHAIQAFDEIG-DPTEIAWNSLV 382
>gi|357155523|ref|XP_003577148.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 735
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 190/668 (28%), Positives = 321/668 (48%), Gaps = 58/668 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP RN+VS+ +++S +R G + L +F+ M+ GF P +F L + + +G +
Sbjct: 45 MPHRNLVSWTAMVSGSARGGASQLGLGLFVSMVRSGFLPNEFALASALRATA-SCHDGLR 103
Query: 61 LQASV---LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
L S+ D F G++LL +Y HG + + F ++ R+ L WN+++ +
Sbjct: 104 LGLSLHGVAVKVGVGGDPFAGSSLLLMYANHGRVADAEGAFAEVRRRDLACWNAMLEGYV 163
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G + M + R ++ S+ + ++ E D FG Q+HG VI N F+ +
Sbjct: 164 SNGCGHEAMRAVVLMRRCDMFTYVSAVKACL--ITGESD--FGRQLHGCVIHNMFEPDTS 219
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N LV+MYF+ A +F+ + +D +SWNT+I A E+ + L + MS
Sbjct: 220 VMNVLVDMYFRAGLKDVAMAVFRRILRKDTISWNTVISGFAHDEDDREVLGCFADMSRSG 279
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN+ T ++ CA +N+ LG I + +V V +A+++ ++C L A
Sbjct: 280 CKPNEVTLSVMLRLCAAKENASLGLQIFGLAYCHGYSENVLVANAVINMLSRCGLLNSAD 339
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + +NIV+WN +I GY S S ++ L ++ G RP+EFT+S VL AFQ
Sbjct: 340 GFFCNLRFRNIVTWNEMIAGYGLYSYSEDAMRLFRSMVCFGERPDEFTYSAVLS---AFQ 396
Query: 357 LL-------QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
Q+H I++ G + ++V SL+ + A G + AL
Sbjct: 397 EAHEPRNHEQVHASILKQGITSRQFVSTSLIKAKAVFGSVQSAL---------------- 440
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI-Y 468
K++ + D+VSW +VI+A +G EV+ LF R +
Sbjct: 441 ----------------KIMEDTGKMDLVSWGVVISAFLKHGLNNEVMSLFDLFRGDSMNR 484
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF-VCNMLIDMYGKCGSIGSSV 527
D + ++L+AC+ L +H L+ +T S+ F V + L+D Y KCG I S+
Sbjct: 485 ADEFILATVLNACANAALLRQCRRVHSLVIRTG--HSNHFCVASALVDAYAKCGGIASAK 542
Query: 528 KIFNEMT--DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
F +++ + I + +++A +G AL + +M P +A+++AC +
Sbjct: 543 SAFADVSSGSGDAILYNTMLTAYANHGLINEALSLYEDMARAQLVPTPATFVALVSACSN 602
Query: 586 GGLVREGMELFERM-NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
GLV +G LF M + +G+ P +Y +VDLL R G L EA+ II MP P +W
Sbjct: 603 FGLVEQGKILFSLMLSEEHGIHPTRANYATLVDLLARKGFLHEAKDIIEVMPLHPWPSVW 662
Query: 645 RTFLEGCQ 652
R+ + GC+
Sbjct: 663 RSLMNGCR 670
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 143/538 (26%), Positives = 235/538 (43%), Gaps = 41/538 (7%)
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ L A +LK G+ D F LL Y R G L + VF++MP ++LV+W ++VS +
Sbjct: 4 SHLHAQLLKLGM-SGDTFTANHLLIAYSRTGLLKNALGVFDEMPHRNLVSWTAMVSGSAR 62
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD-LEFGEQIHGLVIKNGFDYELL 177
G + + LF +VRS E + + ++ D L G +HG+ +K G +
Sbjct: 63 GGASQLGLGLFVSMVRSGFLPNEFALASALRATASCHDGLRLGLSLHGVAVKVGVGGDPF 122
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+SL+ MY + AE F +V RD+ WN ++ + +A+ + M
Sbjct: 123 AGSSLLLMYANHGRVADAEGAFAEVRRRDLACWNAMLEGYVSNGCGHEAMRAVVLMRRCD 182
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+F T+V + +C S G+ +H VI N E D V + LVD Y + + A
Sbjct: 183 MF----TYVSAVKACLITGESDFGRQLHGCVIHNMFEPDTSVMNVLVDMYFRAGLKDVAM 238
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F I K+ +SWN +I G+A + ++ + G +PNE T S +LR A +
Sbjct: 239 AVFRRILRKDTISWNTVISGFAHDEDDREVLGCFADMSRSGCKPNEVTLSVMLRLCAAKE 298
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L I + Y + Y+++ L+ AN + + +
Sbjct: 299 NASLGLQIFGLAYCH----------GYSENVLV------------------ANAVINMLS 330
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
R G N L +IV+WN +IA ++ + LF+ M PD +T+ +
Sbjct: 331 RCGLLNSADGFFCNLRFRNIVTWNEMIAGYGLYSYSEDAMRLFRSMVCFGERPDEFTYSA 390
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+LSA + +H I K + I+S FV LI GS+ S++KI +
Sbjct: 391 VLSAFQEAHEPRNHEQVHASILK-QGITSRQFVSTSLIKAKAVFGSVQSALKIMEDTGKM 449
Query: 537 NVITWTALISAL---GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
++++W +ISA GLN + FR + D L VL AC + L+R+
Sbjct: 450 DLVSWGVVISAFLKHGLNNEVMSLFDLFRGDSM--NRADEFILATVLNACANAALLRQ 505
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 8/244 (3%)
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
AN + Y+RTG + + ++ ++VSW +++ A G + L LF M +
Sbjct: 22 ANHLLIAYSRTGLLKNALGVFDEMPHRNLVSWTAMVSGSARGGASQLGLGLFVSMVRSGF 81
Query: 468 YPDNYTFVSLLSACSKLCN-LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
P+ + S L A + + L LG SLH + + D F + L+ MY G + +
Sbjct: 82 LPNEFALASALRATASCHDGLRLGLSLH-GVAVKVGVGGDPFAGSSLLLMYANHGRVADA 140
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
F E+ R++ W A++ NG A+ M + D ++ + AC
Sbjct: 141 EGAFAEVRRRDLACWNAMLEGYVSNGCGHEAMRAVVLMR----RCDMFTYVSAVKACLIT 196
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
G G +L + + EP+ + +VD+ R G LK+ + + + W T
Sbjct: 197 GESDFGRQLHGCVIHNM-FEPDTSVMNVLVDMYFRAG-LKDVAMAVFRRILRKDTISWNT 254
Query: 647 FLEG 650
+ G
Sbjct: 255 VISG 258
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
S LH + K + S DTF N L+ Y + G + +++ +F+EM RN+++WTA++S
Sbjct: 4 SHLHAQLLKLGM-SGDTFTANHLLIAYSRTGLLKNALGVFDEMPHRNLVSWTAMVSGSAR 62
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVL--TACRHGGLVREGMEL 595
G +Q L F M GF P+ AL + L TA H GL R G+ L
Sbjct: 63 GGASQLGLGLFVSMVRSGFLPNEFALASALRATASCHDGL-RLGLSL 108
>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/590 (28%), Positives = 294/590 (49%), Gaps = 45/590 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVE- 57
+P NV +N +IS L +F MI P + TF +L S P +
Sbjct: 71 IPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQV 130
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ A ++ +G F + V L+ LY ++G +D VFE + K V+W +++S
Sbjct: 131 TEQIHAKIIHHG-FGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLS 189
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G ++ + LFC++ +S V T F V+ + + + GEQ+HG ++K G E
Sbjct: 190 QNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETF 249
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+LV +Y + + +AE++F + RD +S+N++I LA+ +AL+L+ +M +D
Sbjct: 250 VCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDC 309
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P+ T ++++CA + GK +H+ VIK + D+ + +L+D Y KC ++E AH
Sbjct: 310 MKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAH 369
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F +N+V WN +++ Y + + + + +Q+ G PN++T+ +LR+ +
Sbjct: 370 EYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLG 429
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L Q+H +I+ G++ YV L+ YAK G L+ R +
Sbjct: 430 ALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHG----------ELDTARGI------- 472
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
L +L D+VSW +IA + + E L+LF+ M I DN
Sbjct: 473 ---------------LQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNI 517
Query: 473 TFVSLLSACSKLCNLALGSSLHG---LIKKTEIIS-SDTFVCNMLIDMYGKCGSIGSSVK 528
F S +SAC+ + L G +H + +E +S + N+LI +Y KCGSI + +
Sbjct: 518 GFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALASNVLITLYSKCGSIEDAKR 577
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
F EM ++NV++W A+I+ +G+ A+ F EM+ LG P+ V +
Sbjct: 578 EFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVG 627
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 165/671 (24%), Positives = 304/671 (45%), Gaps = 101/671 (15%)
Query: 42 FTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM 101
+ F G + SL ++ +L A + K+G F + +G+ L+ +Y HG +D + +F+D+
Sbjct: 15 WLFEGCFNSGSL--LDAKKLHARIFKSG-FDGEDVLGSRLIDIYLAHGEVDNAIKLFDDI 71
Query: 102 PRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN-EQDLEFG 160
P ++ WN ++S + LF ++ V ES+F V+ S + +
Sbjct: 72 PSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVT 131
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
EQIH +I +GF LV N L+++Y + + A+ +F+ + ++D VSW +I L+++
Sbjct: 132 EQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQN 191
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
+A+ L+ +M V P F V+++C ++ LG+ +H ++K L + FV
Sbjct: 192 GREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVC 251
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YR 339
+ALV Y++ NL A FS++ ++ +S+N+LI G A + L E +QL +
Sbjct: 252 NALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMK 311
Query: 340 PNEFTFSHVLRS----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
P+ T + +L + ++ QLH +I+MG + + GSL+ Y K I A +
Sbjct: 312 PDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEY 371
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
E ++V WN+++ A G+ E
Sbjct: 372 FLTT--------------------------------ETENVVLWNVMLVAYGQLGNLSES 399
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS----DTFVCN 511
+F M+ + P+ YT+ S+L C+ L L LG +H T++I S + +VC+
Sbjct: 400 YWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIH-----TQVIKSGFQFNVYVCS 454
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
+LIDMY K G + ++ I + + +V++WTA+I+ + AL+ F+EME G +
Sbjct: 455 VLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRS 514
Query: 572 DRVALIAVLTACRHGGLVREGMEL---------------------------------FER 598
D + + ++AC + +G ++ E
Sbjct: 515 DNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALASNVLITLYSKCGSIED 574
Query: 599 MNRSYGVEPEMD--HYHCVVDLLVRYGHLKEAEKI----------------ITTMPFPPN 640
R + PE + ++ ++ ++G+ EA + + MP P+
Sbjct: 575 AKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGEMPIEPD 634
Query: 641 ALIWRTFLEGC 651
A+IWRT L C
Sbjct: 635 AMIWRTLLSAC 645
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 151/562 (26%), Positives = 263/562 (46%), Gaps = 64/562 (11%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
++ VS+ ++IS S+ G ++A+ +F M PT + F +LS C + + G QL
Sbjct: 176 KDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQL 235
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
++K GL ++ FV AL+ LY R G L +F M R+ +++NS++S + GF
Sbjct: 236 HGFIVKWGL-SSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGF 294
Query: 122 VE-----------DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
+ DCM C V S ++ S G G+Q+H VIK
Sbjct: 295 SDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYK-----------GKQLHSYVIKM 343
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
G +L++ SL+++Y +C I +A + F E +VV WN ++ A + N ++ ++
Sbjct: 344 GMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIF 403
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
L+M ++ + PNQ T+ ++ +C L LG+ IH +VIK+ + +V+V S L+D YAK
Sbjct: 404 LQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKH 463
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL 349
L+ A + +++VSW A+I GY ++ L E+ G R + FS +
Sbjct: 464 GELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAI 523
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ Q L I Y ++ Y++ I +ALA +N
Sbjct: 524 SACAGIQALNQGQQIHAQSY----------ISGYSEDLSIGNALA-------------SN 560
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
++ +Y++ G + + ++ ++VSWN +I + +G E + LF+ M+ + P
Sbjct: 561 VLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMP 620
Query: 470 DNYTFV-------------SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
++ TFV +LLSAC+ N+ +G + + E S T+V +L +M
Sbjct: 621 NHVTFVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYV--LLSNM 678
Query: 517 YGKCGSIGSSVKIFNEMTDRNV 538
Y G + M DR V
Sbjct: 679 YAVSGKWDYRDRTRQMMKDRGV 700
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/515 (25%), Positives = 241/515 (46%), Gaps = 41/515 (7%)
Query: 142 SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKD 201
+++ + G N L +++H + K+GFD E ++ + L+++Y + +A K+F D
Sbjct: 11 QTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDD 70
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI-L 260
+ +V WN +I L + + L L+ M + V P+++TF V+ +C+G + +
Sbjct: 71 IPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQV 130
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
+ IHAK+I + V + L+D Y+K +++ A L F + K+ VSW A+I G +
Sbjct: 131 TEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQ 190
Query: 321 KS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYV 375
+I L ++ + P + FS VL + +L QLH I++ G + +V
Sbjct: 191 NGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFV 250
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
+L+T Y++ G N+IA ++ S++ R D
Sbjct: 251 CNALVTLYSRWG---------------------NLIAA-----------EQIFSKMHRRD 278
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
+S+N +I+ A G L+LF+ M+ + PD T SLLSAC+ + G LH
Sbjct: 279 RISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHS 338
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
+ K +SSD + L+D+Y KC I ++ + F NV+ W ++ A G G
Sbjct: 339 YVIKMG-MSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLS 397
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
+ F +M+ G P++ ++L C G + G ++ ++ +S G + + +
Sbjct: 398 ESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKS-GFQFNVYVCSVL 456
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+D+ ++G L A I+ + + + W + G
Sbjct: 457 IDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAG 490
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 200/414 (48%), Gaps = 41/414 (9%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N T++++ C + + K +HA++ K+ + + +GS L+D Y ++ A F
Sbjct: 9 NVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLF 68
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRS----SLAF 355
+I + N+ WN +I G +K + + L L+ P+E TF+ VLR+ F
Sbjct: 69 DDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPF 128
Query: 356 QLL-QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q+ Q+H II G+ + V L+ Y+K+G + A L + +V +I+G+
Sbjct: 129 QVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGL 188
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+ NG E + LF M + + P Y F
Sbjct: 189 --------------------------------SQNGREDEAILLFCQMHKSAVIPTPYVF 216
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S+LSAC+K+ LG LHG I K +SS+TFVCN L+ +Y + G++ ++ +IF++M
Sbjct: 217 SSVLSACTKIELFKLGEQLHGFIVKWG-LSSETFVCNALVTLYSRWGNLIAAEQIFSKMH 275
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
R+ I++ +LIS L GF+ RAL+ F +M+ KPD V + ++L+AC G +G +
Sbjct: 276 RRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQ 335
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
L + + G+ ++ ++DL V+ ++ A + T N ++W L
Sbjct: 336 LHSYVIK-MGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTE-TENVVLWNVML 387
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 181/574 (31%), Positives = 276/574 (48%), Gaps = 43/574 (7%)
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI 148
G L VF+ +P +N+++ + G + L+ ++R VA + +F V+
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
S DL G IH G +L V+ +L+++Y +CA A +F + +RDVV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
+WN ++ A + A+ L M + PN +T V ++ A G SIHA
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 268 VIKNALECD---VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
++ LE + V +G+AL+D YAKC L A F + +N V+W+ALI G+
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 325 TSIF-LLIELLQLGY-RPNEFTFSHVLR--SSLA--FQLLQLHCLIIRMGYENYEYVLGS 378
T F L ++L G + + + LR +SLA QLH LI + G S
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
L++ YAK+GLI NE ++ D +S
Sbjct: 348 LLSMYAKAGLI--------------------------------NEATMFFDEIAVKDTIS 375
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
+ +++ C NG +E +FK M+A + PD T VSL+ ACS L L G HG +
Sbjct: 376 YGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVI 435
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
++ +T +CN LIDMY KCG I S ++F++M R+V++W +I+ G++G + A
Sbjct: 436 -IRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEAT 494
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDL 618
F M+ GF PD V I ++ AC H GLV EG F+ M YG+ P M+HY C+VDL
Sbjct: 495 TLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDL 554
Query: 619 LVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L R G L EA + I +MP + +W L C+
Sbjct: 555 LARGGLLDEAYQFIQSMPLKADVRVWGALLGACR 588
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/563 (22%), Positives = 254/563 (45%), Gaps = 52/563 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P + ++N++I AYS G A+ ++ M+ P ++TF +L +C +L + G
Sbjct: 60 IPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAG 119
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A GL D FV TAL+ LY R +VF MP + +V WN++++ +
Sbjct: 120 RTIHAHAAAAGLH-TDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYAN 178
Query: 119 HGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY--- 174
HG + ++ + S+ V ++ L+ L G IH ++ +
Sbjct: 179 HGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEE 238
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++L+ +L++MY +C + A ++F + +R+ V+W+ +IG + +A L+ M
Sbjct: 239 QVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDML 298
Query: 235 VD-IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
V+ + F + T+ + CA L + +G +HA + K+ + D+ ++L+ YAK +
Sbjct: 299 VEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLI 358
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSS 352
A + F EI+ K+ +S+ AL+ G FL+ + +Q P+ T ++ +
Sbjct: 359 NEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPAC 418
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
LQ G S + L + ++ N +
Sbjct: 419 SHLAALQ--------------------------HGKCSHGSVIIRGLALETSIC--NSLI 450
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G+ + + ++ ++ D+VSWN +IA +G KE LF M+ PD+
Sbjct: 451 DMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDV 510
Query: 473 TFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
TF+ L++ACS + G + +G++ + E ++C ++D+ + G +
Sbjct: 511 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRME-----HYIC--MVDLLARGGLLDE 563
Query: 526 SVKIFNEMTDR-NVITWTALISA 547
+ + M + +V W AL+ A
Sbjct: 564 AYQFIQSMPLKADVRVWGALLGA 586
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 185/612 (30%), Positives = 295/612 (48%), Gaps = 43/612 (7%)
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
AQ A ++ +G F D + T L G + +F + R + +N ++ F
Sbjct: 37 AQTHAQIVLHG-FRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSV 95
Query: 119 HGFVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + +F L +S ++ S++ I S +D G IHG I +G D ELL
Sbjct: 96 NESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELL 155
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVD 236
+ +++V MYF+ + A K+F + +D + WNT+I ++E + ++++++ + +
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ TT + ++ + A LQ LG IH+ K +V + + Y+KC ++ A
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMA 275
Query: 297 HLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F E +IV++NA+I GY S + S+ L EL+ G + L+SS
Sbjct: 276 STLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAK---------LKSSTLV 326
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG--LISDALAFVTALNIPRAVVPANIIAG 413
L+ V G LM YA G L S+ L+ + + +
Sbjct: 327 SLVP---------------VSGHLMLIYAIHGYSLKSNFLSHTSV---------STALTT 362
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y++ + KL + + SWN +I+ NG ++ + LF+ M+ + P+ T
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVT 422
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+LSAC++L L+LG +H L++ T+ SS +V LI MY KCGSI + ++F+ M
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESS-IYVSTALIGMYAKCGSIAEARRLFDFM 481
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+N +TW +IS GL+G Q AL F EM G P V + VL AC H GLV+EG
Sbjct: 482 PKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGD 541
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
E+F M YG EP + HY CVVD+L R GHL+ A + I MP P +W T L
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGA--- 598
Query: 654 CRIAKYDTLNST 665
CRI K L T
Sbjct: 599 CRIHKDTNLART 610
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 218/467 (46%), Gaps = 26/467 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
MP+++ + +N++IS Y + +++++F +IN T+ LL D L V
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESC--TRLDTTTLL--DILPAVAELQ 235
Query: 58 ----GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
G Q+ + K G + D +V T + LY + G + ++F + R +V +N+++
Sbjct: 236 ELRLGMQIHSLATKTGCYSHD-YVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMI 294
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
+ +G E + LF EL+ S L S+ V ++ +S L + IHG +K+ F
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLV-PVSGHLMLIYA--IHGYSLKSNFL 351
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
V+ +L +Y + I SA K+F + + + SWN +I ++ A+ L+ M
Sbjct: 352 SHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
PN T ++++CA L LGK +H V E ++V +AL+ YAKC ++
Sbjct: 412 QNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 294 EGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A F + KN V+WN +I GY ++ + E+L G P TF VL +
Sbjct: 472 AEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYAC 531
Query: 353 LAFQLLQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PRAVV 406
L++ + +I R G+E ++ ++G + AL F+ A+ I P V
Sbjct: 532 SHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSV 591
Query: 407 PANIIAG--IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
++ I+ T + L +L+ PD V ++++++ H+ D
Sbjct: 592 WETLLGACRIHKDTNLARTVSEKLFELD-PDNVGYHVLLSNI-HSAD 636
>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 745
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 174/645 (26%), Positives = 317/645 (49%), Gaps = 78/645 (12%)
Query: 50 CDSLNPVEGAQ-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVT 108
C ++ A+ L + ++K+G FC F+ ++ +Y + + + ++F++MP +++V+
Sbjct: 13 CIRFRSIKNAKSLHSHIIKSG-FCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVS 71
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVAL-TESSFVGVIHGLSNEQDLEFGEQIHGLV 167
W ++VS+ + + L+ E++ S++ + + V+ +++E G+ +H +
Sbjct: 72 WTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHI 131
Query: 168 IKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKAL 227
+ D ++++ N+L++MY +C + A+++F ++ ++ SWNT+I A+ A+
Sbjct: 132 FQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAM 191
Query: 228 ELYLRM-SVDIVFPN-----------------------------QTTFVYVINSCAGLQN 257
+L+ +M DIV N + TF V+ +C
Sbjct: 192 KLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDE 251
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS-----WN 312
+LG+ IH +IK+ E + SAL+D Y+ C L A F + + VS WN
Sbjct: 252 LMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWN 311
Query: 313 ALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRM 367
+++ G+ +I + + G R + +TFS VL+ + F L Q+H +I
Sbjct: 312 SMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITS 371
Query: 368 GYENYEYVLGSLMTS-YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
GYE + V+GS++ YAK G I++AL +
Sbjct: 372 GYE-LDCVVGSILIDIYAKQGSINNAL--------------------------------R 398
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
L +L D+V+W+ +I CA G K LF M + D++ +L ACS L +
Sbjct: 399 LFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLAS 458
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
G +H L K S+ V LIDMY KCG I ++ +F +++ + ++WT++I
Sbjct: 459 HQHGKQVHSLCLKKG-YESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIV 517
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
NG A+ A+ +M G KP+++ ++ VLTACRH GLV E ++F + ++G+
Sbjct: 518 GCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLI 577
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
P +HY+C+VD+L + G +EA K+I+ MPF P+ IW + L C
Sbjct: 578 PCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGAC 622
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 169/633 (26%), Positives = 280/633 (44%), Gaps = 95/633 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLL-SCDSLNPVEG 58
MP RN+VS+ +++S + +AL ++ MI E P QF + +L +C + VE
Sbjct: 64 MPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVEL 123
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ + D + ALL +Y + G L + VF ++P K+ +WN+++ + K
Sbjct: 124 GKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAK 183
Query: 119 HGFVEDCMFLFCELVRSEVALTES--------------SFVGVIHGLSNEQD-------- 156
G ++D M LF ++ ++ S FV ++HG + D
Sbjct: 184 QGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVL 243
Query: 157 --------LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
L G +IH +IK+GF+ ++L++MY C + A K+F V
Sbjct: 244 KACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSV 303
Query: 209 S-----WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
S WN+++ + ++ +AL + M V + TF V+ C N L
Sbjct: 304 SESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQ 363
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS 323
+H VI + E D VGS L+D YAK ++ A F + +K++V+W++LI G A S
Sbjct: 364 VHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGS 423
Query: 324 PTSIF-LLIELLQLGYRPNEFTFSHVLR--SSLAFQL--LQLHCLIIRMGYENYEYVLGS 378
F L ++++ LG + + F S VL+ SSLA Q+H L ++ GYE+ V +
Sbjct: 424 DKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTA 483
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
L+ YAK G I DAL+ L L D +S
Sbjct: 484 LIDMYAKCGDIEDALS--------------------------------LFGCLSEIDTMS 511
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC--SKLCNLALG-----S 491
W +I CA NG +E + L M + P+ T + +L+AC S L A
Sbjct: 512 WTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIE 571
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM---TDRNVITWTALISAL 548
+ HGLI E N ++D+ G+ G +VK+ +EM D+ + W++L+ A
Sbjct: 572 TNHGLIPCPEHY-------NCMVDILGQAGRFEEAVKLISEMPFKPDKTI--WSSLLGAC 622
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
G + R L L P+ V++ +L+
Sbjct: 623 GT--YKNRDLANIVAEHLLATSPEDVSVYIMLS 653
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 38/242 (15%)
Query: 342 EFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
+ F + +R LH II+ G+ N+ ++L ++++ Y+K I DA
Sbjct: 7 QIAFRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDAR-------- 58
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
+ ++ +IVSW +++ ++ E L L+
Sbjct: 59 ------------------------NMFDEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNE 94
Query: 462 MRAARI-YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M ++I P+ + + ++L AC + N+ LG +H I + + + D + N L+DMY KC
Sbjct: 95 MIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAK-LDVDIVLMNALLDMYVKC 153
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
GS+ + ++F E+ +N +W LI G A++ F +M +PD V+ +++
Sbjct: 154 GSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMP----EPDIVSWNSII 209
Query: 581 TA 582
Sbjct: 210 AG 211
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/575 (29%), Positives = 287/575 (49%), Gaps = 66/575 (11%)
Query: 142 SSFVGVIHGLSNEQDLEF-------------GEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
S + +IH N L+F +QIH +I G +A +V++Y
Sbjct: 19 SRSISIIHHQPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAG 78
Query: 189 CAGIWSAEKMFKDVEIR---DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
+ A+++F+ I +++ WN+I+ A +ALE+Y RM V + TF
Sbjct: 79 FGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTF 138
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
VI +CA + + L +S+H V++ + ++ VG+ L+ Y K ++ A F ++
Sbjct: 139 PLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAV 198
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRS------------- 351
++ VSWN ++ GYA + ++ G PN T++ +L S
Sbjct: 199 RSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMEL 258
Query: 352 --------------------SLAFQLLQ------LHCLIIRMGYENYEYVLGSLMTSYAK 385
S++ L +H +++ G+ENY +V SL+ Y K
Sbjct: 259 FGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGK 318
Query: 386 SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE--------RPDIV 437
G ++ A + + +V N + Y G +E + QLE RP++V
Sbjct: 319 HGNVNAARILFLEIK-TKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVV 377
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SW+ VI A G +E LELF+ M+ A++ ++ T S+LS C++L L LG +HG +
Sbjct: 378 SWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHV 437
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
++ ++ + V N LI+MY K GS +F ++ ++++I+W +++ G++G + A
Sbjct: 438 VRS-LMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENA 496
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
+ F +M GF+PD V +AVL+AC H GLV EG ELF++M + + VEP+M+HY C+VD
Sbjct: 497 IRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVD 556
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
LL R G L+EA K++ +MP PNA +W L C+
Sbjct: 557 LLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCR 591
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/528 (25%), Positives = 241/528 (45%), Gaps = 59/528 (11%)
Query: 75 AFVGTALLGLYGRHGCLDEVVSVFEDMPRK---SLVTWNSIVSIFGKHGFVEDCMFLFCE 131
AF+ ++ +Y G + + VFE P + +L+ WNSI+ HG+ E+ + ++C
Sbjct: 66 AFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCR 125
Query: 132 LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
+ + V+ +F VI + + +HG V++ GF + L V N L+ MY +
Sbjct: 126 MRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGR 185
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
+ A K+F+ + +R VSWNT++ A + + A E++ M + PN T+ +++S
Sbjct: 186 MDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSS 245
Query: 252 CA--------------------GLQNSIL---------------GKSIHAKVIKNALECD 276
A G L GK IH V+K E
Sbjct: 246 HARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENY 305
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK---SSPTSIFLLIEL 333
+FV ++L+ Y K N+ A + F EI KNIVSWNALI YA +IFL +E
Sbjct: 306 LFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEK 365
Query: 334 LQ--LGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
RPN ++S V+ + L+L + + + S+++ A+
Sbjct: 366 TDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAE-- 423
Query: 388 LISDALAFVTALNIPRAVVPANIIAG-----IYNRTGQYNETVKLLSQLERPDIVSWNIV 442
L + L ++ R+++ NI+ G +Y ++G + E + ++E D++SWN +
Sbjct: 424 LAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTM 483
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL-HGLIKKTE 501
+A +G + + F M PD TFV++LSACS +A G L +IK+
Sbjct: 484 VAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFR 543
Query: 502 IISS-DTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISA 547
+ + + C ++D+ G+ G + + K+ M + N W AL+++
Sbjct: 544 VEPQMEHYAC--MVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNS 589
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 214/492 (43%), Gaps = 98/492 (19%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEG--AQLQ 62
N++ +NSI+ A GY E+AL ++ M G FTF ++ +L +
Sbjct: 99 NLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVH 158
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK---- 118
V++ G F + VG L+G+YG+ G +D+ VFE M +S V+WN++VS +
Sbjct: 159 GHVVEMG-FQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDC 217
Query: 119 HGFVE-------------------------------DCMFLFCELVRSEVALTESSFVGV 147
HG E + M LF + + T + V
Sbjct: 218 HGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVV 277
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
+ + + G+ IHG V+K GF+ L V NSL+ +Y + + +A +F +++ +++
Sbjct: 278 LSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNI 337
Query: 208 VSWN---------------------------------------TIIGALAESENFGKALE 228
VSWN +IG A +ALE
Sbjct: 338 VSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALE 397
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
L+ RM + V N T V++ CA L LG+ IH V+++ ++ ++ VG+ L++ Y
Sbjct: 398 LFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYT 457
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSH 347
K + + +L F +I NK+++SWN ++ GY +I ++++ G+ P+ TF
Sbjct: 458 KSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVA 517
Query: 348 VLRSSLAFQLLQLHCLIIRMGYENY-----EYVLGSLMTSYA-------KSGLISDALAF 395
VL + H ++ G E + E+ + M YA ++GL+ +A
Sbjct: 518 VLSAC-------SHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKV 570
Query: 396 VTALNI-PRAVV 406
V ++ + P A V
Sbjct: 571 VKSMPVEPNACV 582
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 164/354 (46%), Gaps = 44/354 (12%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQ 62
N+V++ S++S+++RCG + + +F M RG T +LS D EG +
Sbjct: 235 NLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIH 294
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
V+K G F FV +L+ LYG+HG ++ +F ++ K++V+WN+++S + G+
Sbjct: 295 GYVVKGG-FENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWC 353
Query: 123 EDCMFLFCELVRSE----VALTESSFVGVIHGLSN----EQDLEF--------------- 159
++ +F +L +++ V S+ VI G ++ E+ LE
Sbjct: 354 DEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVT 413
Query: 160 ----------------GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
G +IHG V+++ D +LV N L+NMY + +F+ +E
Sbjct: 414 IASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIE 473
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
+D++SWNT++ A+ + +M D P+ TFV V+++C+ G+
Sbjct: 474 NKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRE 533
Query: 264 IHAKVIKN-ALECDVFVGSALVDFYAKCDNL-EGAHLCFSEISNKNIVSWNALI 315
+ K+IK +E + + +VD + L E + + S N W AL+
Sbjct: 534 LFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALL 587
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 171/388 (44%), Gaps = 20/388 (5%)
Query: 231 LRMSVDIVF--PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
L S+ I+ PN + + S L + IH+++I F+ + +V YA
Sbjct: 18 LSRSISIIHHQPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYA 77
Query: 289 KCDNLEGAHLCFSEISN----KNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEF 343
+ A F E+S N++ WN+++ A ++ + + +LG + F
Sbjct: 78 GFGLVSDAQRVF-EVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGF 136
Query: 344 TFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
TF V+R+ +L H ++ MG++ +V LM Y K G + DA +
Sbjct: 137 TFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERM 196
Query: 400 NIPRAVVPANIIAGI---YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
+ V +++G Y+ G + S P++V+W ++++ A G + E +
Sbjct: 197 AVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETM 256
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
ELF MR I +LS L G +HG + K + FV N LI +
Sbjct: 257 ELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGG-FENYLFVKNSLICL 315
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM----EFLGFKPD 572
YGK G++ ++ +F E+ +N+++W ALIS+ G+ A F ++ E+ +P+
Sbjct: 316 YGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPN 375
Query: 573 RVALIAVLTACRHGGLVREGMELFERMN 600
V+ AV+ G E +ELF RM
Sbjct: 376 VVSWSAVIGGFASKGQGEEALELFRRMQ 403
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
+ +++++S+N++++ Y G E+A+R F MI GFEP TF +LS C V EG
Sbjct: 472 IENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEG 531
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP 102
+L ++K ++ L GR G L E V + MP
Sbjct: 532 RELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMP 575
>gi|147834193|emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
Length = 826
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/553 (30%), Positives = 271/553 (49%), Gaps = 35/553 (6%)
Query: 103 RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ 162
+ ++++W S +S K E + LF ++ +E + + VI +S +
Sbjct: 51 KDNVISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRV 110
Query: 163 IHGLVIKNGFDYELLVANSLVNMY--FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
I G VIK GF+ E+ VA +L+ Y + +W K+F I+D+V W+ ++ A +S
Sbjct: 111 ICGSVIKLGFESEVSVATALIGFYSDYDMGIVW---KIFNQTPIKDLVLWSAMVSACVKS 167
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
+G+A E++ M D V PN + V ++ +CA + + GK IH IK V
Sbjct: 168 GQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVH 227
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP 340
++LVD YAKC N + + L F +I K+++SW +I G P F +Q
Sbjct: 228 NSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSC-- 285
Query: 341 NEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTAL 399
F + L ++Q E+ G + K+GL LAFV+
Sbjct: 286 --FGADETIVQDLIVAIIQAD-----------EHKFGIAFHGFLLKNGL----LAFVSI- 327
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ +Y + G+ + + QL + D +SW+ +I+ AH+ LE F
Sbjct: 328 --------GTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETF 379
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
K M++ P+ TFVSLL ACS + LG S+ K +S + F+ + LID+Y K
Sbjct: 380 KQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLS-NAFLSSALIDLYCK 438
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
G I IFNE+ ++++ W+++I+ GLNG ALE F M G KP+ V I+V
Sbjct: 439 FGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISV 498
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
L+AC H GL EG F M + YG+ P++ HY C+VDL+ R G+++ A + + MP P
Sbjct: 499 LSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEP 558
Query: 640 NALIWRTFLEGCQ 652
+ IW L GC+
Sbjct: 559 DKRIWGALLAGCR 571
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 166/641 (25%), Positives = 287/641 (44%), Gaps = 85/641 (13%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ--LQ 62
NV+S+ S IS+ + E A+ +F M+ P T ++ S +E +
Sbjct: 53 NVISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVIC 112
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
SV+K G F ++ V TAL+G Y + + V +F P K LV W+++VS K G
Sbjct: 113 GSVIKLG-FESEVSVATALIGFYSDYD-MGIVWKIFNQTPIKDLVLWSAMVSACVKSGQY 170
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ +F + V S V ++ +N L FG++IHG IK F V NSL
Sbjct: 171 GEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSL 230
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
V+MY +C ++ +F + +D++SW TII E++ +A + + RM ++
Sbjct: 231 VDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADE 290
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T +I + G + H ++KN L V +G+AL+ YAK LE A + F +
Sbjct: 291 TIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQ 350
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQLH 361
++ K+ +SW+A+I +A P + + +Q RPNE TF +L++
Sbjct: 351 LNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQA---------- 400
Query: 362 CLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
C +I G + LG + ++A K+G +S+A ++ + +Y + G+
Sbjct: 401 CSLI--GAQE----LGESIQAHATKAGYLSNAFL-------------SSALIDLYCKFGR 441
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
N+ + +++ D+V W+ +I NG E LE F M A + P+ F+S+LSA
Sbjct: 442 INQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSA 501
Query: 481 CSKLCNLALG--SSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
CS C L S + +K II + C ++D+ + G+I +++ N+M
Sbjct: 502 CSH-CGLEHEGWSCFSSMEQKYGIIPKLPHYAC--MVDLISRRGNIEGALQFVNKMP--- 555
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR--HGGLVREGMEL 595
+PD+ A+L CR HG + E EL
Sbjct: 556 -------------------------------MEPDKRIWGALLAGCRSTHGSI--EIAEL 582
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLV----RYGHLKEAEKII 632
R G++P+ Y+ ++ L R+G ++ K++
Sbjct: 583 V--AERLIGLDPQNTSYYVILSNLYAEQGRWGDVERLRKLV 621
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 215/482 (44%), Gaps = 33/482 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GA 59
P +++V +++++SA + G +A +F M G EP + +L +C ++ + G
Sbjct: 150 PIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGK 209
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ +K +F V +L+ +Y + + VF+ + K L++W +I+ ++
Sbjct: 210 EIHGFSIKK-MFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIEN 268
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ F + S E+ +I + + +FG HG ++KNG + +
Sbjct: 269 DCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIG 328
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+L+ MY + + SA +F + +D +SW+ +I A S + ALE + +M
Sbjct: 329 TALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDER 388
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN+ TFV ++ +C+ + LG+SI A K + F+ SAL+D Y K +
Sbjct: 389 PNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAI 448
Query: 300 FSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F+EI K++V W+++I GY + ++ +L G +PNE F VL +
Sbjct: 449 FNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSAC------ 502
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
HC G E+ + S M K G+I +P ++I+ R
Sbjct: 503 -SHC-----GLEHEGWSCFSSMEQ--KYGIIP---------KLPHYACMVDLIS----RR 541
Query: 419 GQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G ++ ++++ PD W ++A C E+ EL R + P N ++ +
Sbjct: 542 GNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVA-ERLIGLDPQNTSYYVI 600
Query: 478 LS 479
LS
Sbjct: 601 LS 602
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 115/242 (47%), Gaps = 14/242 (5%)
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++N Y E V+ E+ +++SW I++ + + LFK M P++ T
Sbjct: 34 MFNTYAYYEEPVEFHG--EKDNVISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVT 91
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+S++ A S L + + G + K S+ V LI Y +G KIFN+
Sbjct: 92 VLSVIRAISGLGLEDMMRVICGSVIKLG-FESEVSVATALIGFYSDY-DMGIVWKIFNQT 149
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++++ W+A++SA +G A E FR M++ G +P+ V+++++L AC + G + G
Sbjct: 150 PIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGK 209
Query: 594 EL----FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
E+ ++M P + ++ +VD+ + + K A ++ + + W T +
Sbjct: 210 EIHGFSIKKM-----FHPLTNVHNSLVDMYAKCRNFK-ASMLVFDQILEKDLISWTTIIR 263
Query: 650 GC 651
GC
Sbjct: 264 GC 265
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 177/620 (28%), Positives = 313/620 (50%), Gaps = 33/620 (5%)
Query: 36 GFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDE 93
G FTF +L +C + + GA++ ++K G + + FV +L+ +Y + +
Sbjct: 5 GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCG-YDSIVFVANSLVSMYAKCNDILG 63
Query: 94 VVSVFEDM-PRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS 152
+F+ M R +V+WNSI+S + +G + + LF E+ ++ V + V +
Sbjct: 64 ARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACE 123
Query: 153 NEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNT 212
+ + G +IH ++K+ ++ VAN+LV M+ + + A ++F +++ +D ++WN+
Sbjct: 124 DSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNS 183
Query: 213 IIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
+I ++ + +AL+ + + + P++ + + ++ + L + GK IHA +KN
Sbjct: 184 MIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNW 243
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE 332
L+ ++ +G+ L+D Y+KC + A L F ++ NK+++SW +I YA + T L+
Sbjct: 244 LDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLR 303
Query: 333 LLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
+Q ++ S L CL E + Y L K GL SD
Sbjct: 304 KVQ----TKGMDVDTMMIGSTLLACSGLRCL--SHAKEVHGYTL--------KRGL-SD- 347
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
++ N+I +Y G N ++ ++ D+VSW +I+ HNG
Sbjct: 348 ------------LMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLA 395
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
E L +F M+ + PD+ T VS+LSA + L L G +HG I + + + V N
Sbjct: 396 NEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTV-NS 454
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
L+DMY CGS+ ++ K+F ++++ WT +I+A G++G + A+E F ME PD
Sbjct: 455 LVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPD 514
Query: 573 RVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII 632
+ +A+L AC H GL+ EG L E M Y +EP +HY C+VDLL R HL+EA +
Sbjct: 515 HITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFV 574
Query: 633 TTMPFPPNALIWRTFLEGCQ 652
+M P A +W FL C+
Sbjct: 575 KSMQIEPTAEVWCAFLGACR 594
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 150/590 (25%), Positives = 264/590 (44%), Gaps = 63/590 (10%)
Query: 1 MPDRN-VVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSC-DSLNPVE 57
M +RN VVS+NSIISAYS G +AL +F M G +T L +C DS
Sbjct: 71 MNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKL 130
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ A++LK+ D +V AL+ ++ R G + +F+++ K +TWNS+++ F
Sbjct: 131 GMEIHAAILKSNQV-LDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFT 189
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G + + FC L + + E S + ++ L G++IH +KN D L
Sbjct: 190 QNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLR 249
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR----- 232
+ N+L++MY +C + A +F + +D++SW T+I A A++ +AL+L +
Sbjct: 250 IGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKG 309
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M VD + T +C+GL+ K +H +K L D+ + + ++D YA C N
Sbjct: 310 MDVDTMMIGSTLL-----ACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGN 363
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASK---SSPTSIFLLIELLQLGYRPNEFTFSHVL 349
+ A F I K++VSW ++I Y + +F L++ + P+ T +L
Sbjct: 364 INYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMK--ETSVEPDSITLVSIL 421
Query: 350 RSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
++ + L ++H I R G+ + SL+ YA G + +A
Sbjct: 422 SAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAY------------ 469
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
K+ +V W +I A +G K +ELF M
Sbjct: 470 --------------------KVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQ 509
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS--SDTFVCNMLIDMYGKCGSI 523
++ PD+ TF++LL ACS + G L +K + + + C L+D+ G+ +
Sbjct: 510 KLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYAC--LVDLLGRANHL 567
Query: 524 GSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
+ M + W A + A ++ + + L + + L PD
Sbjct: 568 EEAYHFVKSMQIEPTAEVWCAFLGACRIH--SNKKLGEIAAQKLLDLDPD 615
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
MR + D++TF +L AC + ++ G+ +HGLI K S FV N L+ MY KC
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCG-YDSIVFVANSLVSMYAKCN 59
Query: 522 SIGSSVKIFNEMTDRN-VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
I + K+F+ M +RN V++W ++ISA LNG AL FREM+ G + L+A L
Sbjct: 60 DILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAAL 119
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAEKIITTMPFP 638
AC + GME+ + +S V +D Y + +V + VR+G + A +I +
Sbjct: 120 QACEDSSFKKLGMEIHAAILKSNQV---LDVYVANALVAMHVRFGKMSYAARIFDELDEK 176
Query: 639 PNALIWRTFLEG 650
N + W + + G
Sbjct: 177 DN-ITWNSMIAG 187
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 186/612 (30%), Positives = 297/612 (48%), Gaps = 43/612 (7%)
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
AQ A ++ +G F D + T L G + +F + R + +N ++ F
Sbjct: 37 AQTHAQIILHG-FRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSV 95
Query: 119 HGFVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + +F L +S ++ S++ I S +D G IHG + +G D ELL
Sbjct: 96 NESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELL 155
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVD 236
+ +++V MYF+ + A K+F + +D + WNT+I ++E + ++++++ + +
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ TT + ++ + A LQ LG IH+ K +V + + Y+KC ++
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMG 275
Query: 297 HLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F E +IV++NA+I GY S + S+ L EL+ G R LRSS
Sbjct: 276 SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR---------LRSSTLV 326
Query: 356 QLLQL--HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L+ + H ++I Y + Y L S S+A +S AL V
Sbjct: 327 SLVPVSGHLMLI---YAIHGYCLKSNFLSHAS---VSTALTTV----------------- 363
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
Y++ + KL + + SWN +I+ NG ++ + LF+ M+ + P+ T
Sbjct: 364 -YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+LSAC++L L+LG +H L++ T+ SS +V LI MY KCGSI + ++F+ M
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESS-IYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
T +N +TW +IS GL+G Q AL F EM G P V + VL AC H GLV+EG
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD 541
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
E+F M YG EP + HY C+VD+L R GHL+ A + I M P + +W T L
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGA--- 598
Query: 654 CRIAKYDTLNST 665
CRI K L T
Sbjct: 599 CRIHKDTNLART 610
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 221/467 (47%), Gaps = 26/467 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
MP+++ + +N++IS Y + +++++F +IN T+ LL D L V
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESC--TRLDTTTLL--DILPAVAELQ 235
Query: 58 ----GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
G Q+ + K G + D +V T + LY + G + ++F + + +V +N+++
Sbjct: 236 ELRLGMQIHSLATKTGCYSHD-YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMI 294
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
+ +G E + LF EL+ S L S+ V ++ +S L + IHG +K+ F
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV-PVSGHLMLIYA--IHGYCLKSNFL 351
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
V+ +L +Y + I SA K+F + + + SWN +I ++ A+ L+ M
Sbjct: 352 SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
PN T ++++CA L LGK +H V E ++V +AL+ YAKC ++
Sbjct: 412 QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 294 EGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A F ++ KN V+WN +I GY ++ + E+L G P TF VL +
Sbjct: 472 AEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYAC 531
Query: 353 LAFQLLQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PRAVV 406
L++ + +I R G+E ++ ++G + AL F+ A++I P + V
Sbjct: 532 SHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSV 591
Query: 407 PANIIAG--IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
++ I+ T + L +L+ PD V ++++++ H+ D
Sbjct: 592 WETLLGACRIHKDTNLARTVSEKLFELD-PDNVGYHVLLSNI-HSAD 636
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 169/575 (29%), Positives = 287/575 (49%), Gaps = 66/575 (11%)
Query: 142 SSFVGVIHGLSNEQDLEF-------------GEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
S + +IH N L+F +QIH +I G +A +V++Y
Sbjct: 19 SRSISIIHHQPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAG 78
Query: 189 CAGIWSAEKMFKDVEIR---DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
+ A+++F+ I +++ WN+I+ A +ALE+Y RM V + TF
Sbjct: 79 FGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTF 138
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
VI +CA + + L +S+H V++ + ++ VG+ L+ Y K ++ A F ++
Sbjct: 139 PLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAV 198
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRS------------- 351
++ VSWN ++ GYA + ++ G PN T++ +L S
Sbjct: 199 RSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMEL 258
Query: 352 --------------------SLAFQLLQ------LHCLIIRMGYENYEYVLGSLMTSYAK 385
S++ L +H +++ G+ENY +V SL+ Y K
Sbjct: 259 FGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGK 318
Query: 386 SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE--------RPDIV 437
G ++ A + + +V N + Y G +E + QLE RP++V
Sbjct: 319 HGNVNAARILFLEIKT-KNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVV 377
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SW+ VI A G +E LELF+ M+ A++ ++ T S+LS C++L L LG +HG +
Sbjct: 378 SWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHV 437
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
++ ++ + V N LI+MY K GS +F ++ ++++I+W +++ G++G + A
Sbjct: 438 VRS-LMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENA 496
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
+ F +M GF+PD V +AVL+AC H GLV EG ELF++M + + VEP+M+HY C+VD
Sbjct: 497 IRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVD 556
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
LL R G L+EA K++ +MP PNA +W L C+
Sbjct: 557 LLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCR 591
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/528 (25%), Positives = 241/528 (45%), Gaps = 59/528 (11%)
Query: 75 AFVGTALLGLYGRHGCLDEVVSVFEDMPRK---SLVTWNSIVSIFGKHGFVEDCMFLFCE 131
AF+ ++ +Y G + + VFE P + +L+ WNSI+ HG+ E+ + ++C
Sbjct: 66 AFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCR 125
Query: 132 LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
+ + V+ +F VI + + +HG V++ GF + L V N L+ MY +
Sbjct: 126 MRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGR 185
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
+ A K+F+ + +R VSWNT++ A + + A E++ M + PN T+ +++S
Sbjct: 186 MDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSS 245
Query: 252 CA--------------------GLQNSIL---------------GKSIHAKVIKNALECD 276
A G L GK IH V+K E
Sbjct: 246 HARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENY 305
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK---SSPTSIFLLIEL 333
+FV ++L+ Y K N+ A + F EI KNIVSWNALI YA +IFL +E
Sbjct: 306 LFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEK 365
Query: 334 LQ--LGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
RPN ++S V+ + L+L + + + S+++ A+
Sbjct: 366 TDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAE-- 423
Query: 388 LISDALAFVTALNIPRAVVPANIIAG-----IYNRTGQYNETVKLLSQLERPDIVSWNIV 442
L + L ++ R+++ NI+ G +Y ++G + E + ++E D++SWN +
Sbjct: 424 LAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTM 483
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL-HGLIKKTE 501
+A +G + + F M PD TFV++LSACS +A G L +IK+
Sbjct: 484 VAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFR 543
Query: 502 IISS-DTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISA 547
+ + + C ++D+ G+ G + + K+ M + N W AL+++
Sbjct: 544 VEPQMEHYAC--MVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNS 589
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 214/492 (43%), Gaps = 98/492 (19%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEG--AQLQ 62
N++ +NSI+ A GY E+AL ++ M G FTF ++ +L +
Sbjct: 99 NLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVH 158
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK---- 118
V++ G F + VG L+G+YG+ G +D+ VFE M +S V+WN++VS +
Sbjct: 159 GHVVEMG-FQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDC 217
Query: 119 HGFVE-------------------------------DCMFLFCELVRSEVALTESSFVGV 147
HG E + M LF + + T + V
Sbjct: 218 HGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVV 277
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
+ + + G+ IHG V+K GF+ L V NSL+ +Y + + +A +F +++ +++
Sbjct: 278 LSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNI 337
Query: 208 VSWN---------------------------------------TIIGALAESENFGKALE 228
VSWN +IG A +ALE
Sbjct: 338 VSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALE 397
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
L+ RM + V N T V++ CA L LG+ IH V+++ ++ ++ VG+ L++ Y
Sbjct: 398 LFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYT 457
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSH 347
K + + +L F +I NK+++SWN ++ GY +I ++++ G+ P+ TF
Sbjct: 458 KSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVA 517
Query: 348 VLRSSLAFQLLQLHCLIIRMGYENY-----EYVLGSLMTSYA-------KSGLISDALAF 395
VL + H ++ G E + E+ + M YA ++GL+ +A
Sbjct: 518 VLSAC-------SHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKV 570
Query: 396 VTALNI-PRAVV 406
V ++ + P A V
Sbjct: 571 VKSMPVEPNACV 582
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 164/354 (46%), Gaps = 44/354 (12%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQ 62
N+V++ S++S+++RCG + + +F M RG T +LS D EG +
Sbjct: 235 NLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIH 294
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
V+K G F FV +L+ LYG+HG ++ +F ++ K++V+WN+++S + G+
Sbjct: 295 GYVVKGG-FENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWC 353
Query: 123 EDCMFLFCELVRSE----VALTESSFVGVIHGLSN----EQDLEF--------------- 159
++ +F +L +++ V S+ VI G ++ E+ LE
Sbjct: 354 DEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVT 413
Query: 160 ----------------GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
G +IHG V+++ D +LV N L+NMY + +F+ +E
Sbjct: 414 IASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIE 473
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
+D++SWNT++ A+ + +M D P+ TFV V+++C+ G+
Sbjct: 474 NKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRE 533
Query: 264 IHAKVIKN-ALECDVFVGSALVDFYAKCDNL-EGAHLCFSEISNKNIVSWNALI 315
+ K+IK +E + + +VD + L E + + S N W AL+
Sbjct: 534 LFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALL 587
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 171/388 (44%), Gaps = 20/388 (5%)
Query: 231 LRMSVDIVF--PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
L S+ I+ PN + + S L + IH+++I F+ + +V YA
Sbjct: 18 LSRSISIIHHQPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYA 77
Query: 289 KCDNLEGAHLCFSEISN----KNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEF 343
+ A F E+S N++ WN+++ A ++ + + +LG + F
Sbjct: 78 GFGLVSDAQRVF-EVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGF 136
Query: 344 TFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
TF V+R+ +L H ++ MG++ +V LM Y K G + DA +
Sbjct: 137 TFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERM 196
Query: 400 NIPRAVVPANIIAGI---YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
+ V +++G Y+ G + S P++V+W ++++ A G + E +
Sbjct: 197 AVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETM 256
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
ELF MR I +LS L G +HG + K + FV N LI +
Sbjct: 257 ELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGG-FENYLFVKNSLICL 315
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM----EFLGFKPD 572
YGK G++ ++ +F E+ +N+++W ALIS+ G+ A F ++ E+ +P+
Sbjct: 316 YGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPN 375
Query: 573 RVALIAVLTACRHGGLVREGMELFERMN 600
V+ AV+ G E +ELF RM
Sbjct: 376 VVSWSAVIGGFASKGQGEEALELFRRMQ 403
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
+ +++++S+N++++ Y G E+A+R F MI GFEP TF +LS C V EG
Sbjct: 472 IENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEG 531
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP 102
+L ++K ++ L GR G L E V + MP
Sbjct: 532 RELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMP 575
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 187/627 (29%), Positives = 298/627 (47%), Gaps = 49/627 (7%)
Query: 39 PTQFTFGGLL--SCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS 96
P +F LL D + +G L A ++K + ++ L+ Y + G L
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHG-----FVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
VFE++ K++V++N ++ +G FV + LF ++ + + +F GV
Sbjct: 65 VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLE---LFRRMIANNILPDAHTFPGVFTAA 121
Query: 152 SNEQDLEF-GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
+ F Q+H L IK ++ V +SLVN Y + ++ A K+F + R++VSW
Sbjct: 122 ALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSW 181
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
T+I A + +AL ++ M + N+ F V+++ + GK +H V+K
Sbjct: 182 TTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVK 241
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFL 329
N + V V +ALV YAKC NL + + F S+KN ++W+ALI GY+ + S ++ L
Sbjct: 242 NGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKL 301
Query: 330 LIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAK 385
++ G+ P+EFT VL++ + Q H +++ GYE Y +L+ YAK
Sbjct: 302 FSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAK 361
Query: 386 SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA 445
G DA R G L PD+V W +IA
Sbjct: 362 FGFTGDA------------------------RKG--------FDFLLEPDLVLWTSIIAG 389
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
NG +E L ++ M+ +I P+ T S+L ACS L L G +H K +
Sbjct: 390 YVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGL-GP 448
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
+ + + L MY KCGS+ V IF M R++++W A+IS L NG + ALE F EM
Sbjct: 449 ELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMR 508
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G KPD + + VL+AC H G+V+ G F M + + P ++HY C+VD+L R G L
Sbjct: 509 LEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKL 568
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQ 652
EA++ I + +WR L C+
Sbjct: 569 NEAKEFIESAIIDHGMCLWRILLPACR 595
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 147/560 (26%), Positives = 265/560 (47%), Gaps = 48/560 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVED--ALRMFLYMINRGFEPTQFTFGGLLSCDSLN---P 55
+ +NVVS+N +I S G L +F MI P TF G+ + +LN
Sbjct: 69 LKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCN 128
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
+ Q+ +K D FVG++L+ Y + GC+ E +F+ MP ++LV+W +++S
Sbjct: 129 FDARQVHVLGIKTASI-DDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISG 187
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ ++ + +F + E L E F V+ L + ++ G+Q+H +V+KNG
Sbjct: 188 YASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEF 247
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V N+LV MY +C + + +F+ ++ ++W+ +I +++ + KAL+L+ +M
Sbjct: 248 VSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHY 307
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
P++ T V V+ +C+ + GK H ++K+ E ++ +ALVD YAK
Sbjct: 308 AGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGD 367
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLR--SS 352
A F + ++V W ++I GY + +Q+ PNE T + VL+ S+
Sbjct: 368 ARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSN 427
Query: 353 LAF--QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
LA Q Q+H I+ G + +L T YAK G +
Sbjct: 428 LAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSL--------------------- 466
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
E V + ++ + DIVSWN +I+ + NG +E LELF+ MR PD
Sbjct: 467 -----------EEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPD 515
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLI--KKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
+ TFV++LSACS + + G + ++ + + + + C ++D+ + G + + +
Sbjct: 516 HITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYAC--MVDVLSRAGKLNEAKE 573
Query: 529 -IFNEMTDRNVITWTALISA 547
I + + D + W L+ A
Sbjct: 574 FIESAIIDHGMCLWRILLPA 593
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 227/460 (49%), Gaps = 38/460 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS---CDSLNPVE 57
MP+RN+VS+ ++IS Y+ ++AL +F M +F F +LS C
Sbjct: 173 MPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVD-S 231
Query: 58 GAQLQASVLKNGLFCADAFVG--TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G Q+ V+KNG+ FV AL+ +Y + G L+ + +FE K+ +TW+++++
Sbjct: 232 GKQVHCVVVKNGVL---EFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITG 288
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ + G + LF ++ + +E + VGV+ S+ +E G+Q HG ++K+G++ +
Sbjct: 289 YSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQ 348
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ A +LV+MY + A K F + D+V W +II ++ +AL +Y RM +
Sbjct: 349 IYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQM 408
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ PN+ T V+ +C+ L GK IHA+ IK L ++ + SAL YAKC +LE
Sbjct: 409 RKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEE 468
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
L F + ++IVSWNA+I G + L E ++L G +P+ TF VL +
Sbjct: 469 GVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSAC-- 526
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
H I++ G+ + ++ D V PR A ++ +
Sbjct: 527 -----SHMGIVKRGWAYFN--------------MMFDEFCLV-----PRVEHYACMV-DV 561
Query: 415 YNRTGQYNETVKLL-SQLERPDIVSWNIVIAACAHNGDYK 453
+R G+ NE + + S + + W I++ AC ++ +Y+
Sbjct: 562 LSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYE 601
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 11/196 (5%)
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P N +F +LL + +L G LH I K +SS ++ N LI Y KCG + +
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64
Query: 529 IFNEMTDRNVITWTALISALGLNGF--AQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
+F + +NV+++ LI L NG + LE FR M PD V TA
Sbjct: 65 VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTA---- 120
Query: 587 GLVREGMELFERMNRSYGVE-PEMDHY---HCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
+ G R G++ +D +V+ + G + EA K+ MP N +
Sbjct: 121 AALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMP-ERNLV 179
Query: 643 IWRTFLEGCQRCRIAK 658
W T + G ++AK
Sbjct: 180 SWTTMISGYASKQMAK 195
>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 729
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 168/562 (29%), Positives = 263/562 (46%), Gaps = 73/562 (12%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
QI +K G + + V SL+++Y + A MF + RDVVSWN +I ++
Sbjct: 75 ARQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQ 134
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ A++L++ M + PNQTT V ++ SC + G+SIH IK D +
Sbjct: 135 NGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHL 194
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGY 338
+AL+ YAKCD+LE + L F E+ K++VSWN +I Y +I E+L+ G+
Sbjct: 195 NNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGF 254
Query: 339 RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYEN------------------------YEY 374
P+ T + L S+ AF +HC +++ G+ N Y+Y
Sbjct: 255 HPSSVTIMN-LVSANAFPE-NVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKY 312
Query: 375 -------VLGSLMTSYAKSGLISDAL-AFVTALNI---PRAVVPANIIAGI--------- 414
L ++++SY++ G I A+ F+ + + P AV ++ GI
Sbjct: 313 YPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIG 372
Query: 415 -------------------------YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
Y+R + + L + +++WN +I+ C
Sbjct: 373 CTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQA 432
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
G + +ELF M PD T SLLS C +L NL +G +LH I + + D F+
Sbjct: 433 GKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVED-FI 491
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
LIDMY KCG + + K+F + D + TW A+IS L G A + +++ G
Sbjct: 492 GTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGL 551
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
KPD++ + VL AC HGGLV G+E F M + YG+ P + HY C+V LL + G KEA
Sbjct: 552 KPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAI 611
Query: 630 KIITTMPFPPNALIWRTFLEGC 651
+ I M P++ +W L C
Sbjct: 612 EFINKMEIQPDSAVWGALLNAC 633
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 228/448 (50%), Gaps = 34/448 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M +++VVS+N++I Y + G + A+ F M+ GF P+ T L+S ++
Sbjct: 218 MDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANAFP----EN 273
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ V+K G F DA V T+L+ LY + G + +++ P K L+T +I+S + + G
Sbjct: 274 VHCYVVKCG-FTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKG 332
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+E + F + ++ ++ + +GV+HG++N G HG +K+G + LVAN
Sbjct: 333 DIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVAN 392
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
L+++Y + I +A +F D+ + +++WN++I ++ A+EL+ MS+ P
Sbjct: 393 GLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKP 452
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T +++ C L N +G+++H+ +++N + + F+G+AL+D Y+KC L+ A F
Sbjct: 453 DAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVF 512
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQ 359
I + + +WNA+I GY+ + F LQ G +P++ TF VL +
Sbjct: 513 YNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAAC------- 565
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
H ++ +G E + ++MT + GL+ + I + + G
Sbjct: 566 THGGLVYLGLEYF-----NIMTK--EYGLMPSLQHYAC-------------IVALLGKEG 605
Query: 420 QYNETVKLLSQLE-RPDIVSWNIVIAAC 446
+ E ++ ++++E +PD W ++ AC
Sbjct: 606 LFKEAIEFINKMEIQPDSAVWGALLNAC 633
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/554 (23%), Positives = 265/554 (47%), Gaps = 45/554 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
M R+VVS+N +I YS+ GY+ A+++F+ M+ F+P Q T LL SC + +G
Sbjct: 117 MSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQG 176
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +K G F D+ + AL+ +Y + L+ +F++M KS+V+WN+++ ++G+
Sbjct: 177 RSIHGFGIKAG-FGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQ 235
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + F E+++ + + + ++ + F E +H V+K GF + V
Sbjct: 236 NGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANA------FPENVHCYVVKCGFTNDASV 289
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SLV +Y + +A++++K +D+++ II + +E + A+E +++ +
Sbjct: 290 VTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDI 349
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ + V++ + +G + H +K+ L D V + L+ Y++ D +E A
Sbjct: 350 KPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALS 409
Query: 299 CFSEISNKNIVSWNALILG--YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F ++ K +++WN++I G A KSS ++ L E+ G +P+ T + +L S Q
Sbjct: 410 LFYDMREKPLITWNSMISGCVQAGKSS-DAMELFSEMSMCGKKPDAITIASLL--SGCCQ 466
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L L R+G + Y+L + N+ + +Y+
Sbjct: 467 LGNL-----RIGETLHSYILRN---------------------NVRVEDFIGTALIDMYS 500
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G+ + K+ ++ P + +WN +I+ + G + ++ + PD TF+
Sbjct: 501 KCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLG 560
Query: 477 LLSACSKLCNLALGSSLHGLIKKTE--IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM- 533
+L+AC+ + LG ++ K + S + C ++ + GK G +++ N+M
Sbjct: 561 VLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYAC--IVALLGKEGLFKEAIEFINKME 618
Query: 534 TDRNVITWTALISA 547
+ W AL++A
Sbjct: 619 IQPDSAVWGALLNA 632
>gi|302818166|ref|XP_002990757.1| hypothetical protein SELMODRAFT_132252 [Selaginella moellendorffii]
gi|300141495|gb|EFJ08206.1| hypothetical protein SELMODRAFT_132252 [Selaginella moellendorffii]
Length = 624
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 171/585 (29%), Positives = 299/585 (51%), Gaps = 38/585 (6%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D +G L+ +Y + G L + V + MP + + W +I+S + G ++LF L+
Sbjct: 29 DHHLGNQLVQMYLKCGSLADARRVLDTMPARGKLAWTAIISAYVHSGDFHQAIYLFRCLL 88
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
V SFV ++ L+ ++ E +HG ++++G + EL+VAN+L++MY + +
Sbjct: 89 LEGVIPDAVSFVAMLGALALDESQELATCVHGWIVESGLEQELIVANALMSMYSKRLDLR 148
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
S K+F+ + R+VVSW +I A A +A+ L+ M ++ V PN+ TF + +
Sbjct: 149 SCWKVFERMPERNVVSWTVMIAASARLGELAEAMRLFRSMQLEGVRPNEITFSSTLVLFS 208
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
G ++ K IH +++ + V +A V A+C +L A F ++ ++ +SWN
Sbjct: 209 GSKDLRAAKLIHEQIVGSGFGAVTVVANACVGMLARCGDLAAAARVFQSMAERDEISWNV 268
Query: 314 LILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY 372
+I A + +P L +E++ G RP+ TF +L SS+ L+ Y
Sbjct: 269 MINAAAEEGEAPRVASLFMEMMAEGRRPDRATFLSIL-SSMEKNLVDPPVPPF------Y 321
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
+ VL + A+SG + ++L + A+V Y + G K+ +
Sbjct: 322 QLVLNCI----AESG-------YQSSLQVTNALV------SFYGKCGDVEGARKVFGSIS 364
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
PD++S +IAA + +++ L +F+ + + + + TF+ LLS+C L +
Sbjct: 365 SPDVISCTALIAAFSQRAQFQDALVVFRRLLHSGVRANQVTFLELLSSCRSLSD------ 418
Query: 493 LHGLIKKTEIISS----DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
GL ++I++S + V L++MY CG++ + + +N + +N++ I+A
Sbjct: 419 --GLWIHSQIVASGFQSEVDVAAALVEMYSGCGNLKQAKRAYNAVAVKNLVLCNVYIAAN 476
Query: 549 GLNGFAQRALEKFREMEFLG-FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
NG ++RAL+ F EM+ G FKPD + L AVL+AC HGGLV +G + F M Y +
Sbjct: 477 AQNGNSERALKLFWEMQQDGGFKPDGITLNAVLSACAHGGLVSQGCQYFAGMKCDYQLMC 536
Query: 608 EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
HY C++DLL R G L AEK+ T+MPFPP+ + FL C+
Sbjct: 537 NSQHYSCLIDLLGRAGRLDIAEKVTTSMPFPPDQSVRMAFLGACR 581
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 225/483 (46%), Gaps = 36/483 (7%)
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
S +DL IH ++ +G D + + N LV MY +C + A ++ + R ++W
Sbjct: 6 STTRDLATARMIHSRIVSSGLDRDHHLGNQLVQMYLKCGSLADARRVLDTMPARGKLAWT 65
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
II A S +F +A+ L+ + ++ V P+ +FV ++ + A ++ L +H ++++
Sbjct: 66 AIISAYVHSGDFHQAIYLFRCLLLEGVIPDAVSFVAMLGALALDESQELATCVHGWIVES 125
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI 331
LE ++ V +AL+ Y+K +L F + +N+VSW +I A L
Sbjct: 126 GLEQELIVANALMSMYSKRLDLRSCWKVFERMPERNVVSWTVMIAASARLGELAEAMRLF 185
Query: 332 ELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
+QL G RPNE TFS L + L+ LI +E ++GS
Sbjct: 186 RSMQLEGVRPNEITFSSTLVLFSGSKDLRAAKLI-------HEQIVGS------------ 226
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
VT V AN G+ R G ++ + D +SWN++I A A G
Sbjct: 227 -GFGAVT--------VVANACVGMLARCGDLAAAARVFQSMAERDEISWNVMINAAAEEG 277
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS---SDT 507
+ V LF M A PD TF+S+LS+ K + L+ S S
Sbjct: 278 EAPRVASLFMEMMAEGRRPDRATFLSILSSMEKNLVDPPVPPFYQLVLNCIAESGYQSSL 337
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
V N L+ YGKCG + + K+F ++ +VI+ TALI+A Q AL FR +
Sbjct: 338 QVTNALVSFYGKCGDVEGARKVFGSISSPDVISCTALIAAFSQRAQFQDALVVFRRLLHS 397
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G + ++V + +L++CR + +G+ + ++ S G + E+D +V++ G+LK+
Sbjct: 398 GVRANQVTFLELLSSCRS---LSDGLWIHSQIVAS-GFQSEVDVAAALVEMYSGCGNLKQ 453
Query: 628 AEK 630
A++
Sbjct: 454 AKR 456
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 181/358 (50%), Gaps = 14/358 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVEGA 59
MP+RNVVS+ +I+A +R G + +A+R+F M G P + TF L S + A
Sbjct: 157 MPERNVVSWTVMIAASARLGELAEAMRLFRSMQLEGVRPNEITFSSTLVLFSGSKDLRAA 216
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+L + F A V A +G+ R G L VF+ M + ++WN +++ +
Sbjct: 217 KLIHEQIVGSGFGAVTVVANACVGMLARCGDLAAAARVFQSMAERDEISWNVMINAAAEE 276
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL------EFGEQIHGLVIKNGFD 173
G LF E++ ++F+ ++ + E++L F + + + ++G+
Sbjct: 277 GEAPRVASLFMEMMAEGRRPDRATFLSILSSM--EKNLVDPPVPPFYQLVLNCIAESGYQ 334
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
L V N+LV+ Y +C + A K+F + DV+S +I A ++ F AL ++ R+
Sbjct: 335 SSLQVTNALVSFYGKCGDVEGARKVFGSISSPDVISCTALIAAFSQRAQFQDALVVFRRL 394
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
V NQ TF+ +++SC L + G IH++++ + + +V V +ALV+ Y+ C NL
Sbjct: 395 LHSGVRANQVTFLELLSSCRSLSD---GLWIHSQIVASGFQSEVDVAAALVEMYSGCGNL 451
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQL-GYRPNEFTFSHVL 349
+ A ++ ++ KN+V N I A +S ++ L E+ Q G++P+ T + VL
Sbjct: 452 KQAKRAYNAVAVKNLVLCNVYIAANAQNGNSERALKLFWEMQQDGGFKPDGITLNAVL 509
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 165/493 (33%), Positives = 247/493 (50%), Gaps = 31/493 (6%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS-AEKMFKDVEIRDVVSWNTIIGALAES 220
+IH LV+ NG LL++ L+ A A KMF + RDV WNT+I A++
Sbjct: 47 RIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADA 106
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
+AL LY M +FP+ TF +V+ SCA L GK +H ++K+ + DVFV
Sbjct: 107 GPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQ 166
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYR 339
S+LV Y++ G L F E+ +NIVSW A+I GY ++ + + E++ G +
Sbjct: 167 SSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQ 226
Query: 340 PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
PN T VL + + L L G L+ Y L
Sbjct: 227 PNAVTLVSVLPACAGLEFLNL----------------GKLIHGYG------------IKL 258
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ V N + +Y + G L + ++VSWN +IAA N ++LF
Sbjct: 259 GVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLF 318
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
+ M+A ++ D T VS++SAC+ L L G +H L+K+ + + + N LIDMY K
Sbjct: 319 RRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGL-EINVSITNALIDMYAK 377
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
CG+I + ++F + R+V++WT++I A +G + AL+ F M+ G KP+ AV
Sbjct: 378 CGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAV 437
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
TACRH GLV EG + FE M R Y + P ++H C+VDLL R G L EA + I MP P
Sbjct: 438 FTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEP 497
Query: 640 NALIWRTFLEGCQ 652
+ +W L C+
Sbjct: 498 DVSVWGALLGSCR 510
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 247/486 (50%), Gaps = 40/486 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
MP R+V +N++I Y+ G E+AL ++ M G P +TF ++ SC L+ + EG
Sbjct: 88 MPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREG 147
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ +++K+G F +D FV ++L+ +Y + G + VF +M +++V+W ++++ + +
Sbjct: 148 KEVHCNIVKHG-FDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQ 206
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + ++ + +F E+V S + V V+ + + L G+ IHG IK G D ++ +
Sbjct: 207 NRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSL 266
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+ +Y +C + +A +F + ++++VSWN +I A ++ A++L+ RM + V
Sbjct: 267 TNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKV 326
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ T V VI++CA L G+ +H V + LE +V + +AL+D YAKC N++ A
Sbjct: 327 DFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLARE 386
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + +++VSW ++I AS ++ L + G +PN FTF+ V +
Sbjct: 387 VFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTAC----- 441
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
H ++ G +++E S+M Y+ I V + + R
Sbjct: 442 --RHSGLVEEGRKHFE----SMMRDYS----------------IMPGVEHCACMVDLLGR 479
Query: 418 TGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY---PDNYT 473
G E + + ++ PD+ W ++ +C + + E+ EL A +++ P T
Sbjct: 480 AGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNL-ELAELV----AEKLFLLDPQTVT 534
Query: 474 FVSLLS 479
F L+S
Sbjct: 535 FYVLMS 540
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/513 (25%), Positives = 240/513 (46%), Gaps = 43/513 (8%)
Query: 43 TFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYG--RHGCLDEVVSVFED 100
+F LL+C S P + +++ A V+ NG C + + L + +D +F+
Sbjct: 31 SFNYLLNCCSSLP-DLSRIHALVVTNG--CGQNLLLSTKLIITACCLAPTMDYARKMFDQ 87
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
MP++ + WN+++ + G E+ + L+ + + + +F V+ + L G
Sbjct: 88 MPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREG 147
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
+++H ++K+GFD ++ V +SLV MY Q E +F ++ +R++VSW +I ++
Sbjct: 148 KEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQN 207
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
F + L ++ M PN T V V+ +CAGL+ LGK IH IK ++ DV +
Sbjct: 208 RYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLT 267
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP 340
+AL+ Y KC N+E A F + +N+VSWNA+I Y ++ + L +Q
Sbjct: 268 NALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVD 327
Query: 341 NEF-TFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
++ T V+ + + L +H L+ R G E + +L+ YAK G I
Sbjct: 328 FDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNI------ 381
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
++ R V +L +VSW +I ACA +G ++
Sbjct: 382 ----DLAREV----------------------FERLPCRSVVSWTSMIGACASHGHGEDA 415
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
L+LF M+ + P+++TF ++ +AC + G + + I C ++D
Sbjct: 416 LKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVD 475
Query: 516 MYGKCGSIGSSVKIFNEM-TDRNVITWTALISA 547
+ G+ GS+ + + ++M + +V W AL+ +
Sbjct: 476 LLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGS 508
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 182/676 (26%), Positives = 321/676 (47%), Gaps = 87/676 (12%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G QL + +K G + + FV T LL +Y + ++ +F+ M K+L +W +++ +
Sbjct: 50 GKQLHSHSIKTGFYNHN-FVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHL 108
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFV--GVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
G LF E + + FV V++ DLE G Q+HG+V+K+GF
Sbjct: 109 NMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTN 168
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA------------------L 217
+ V N+L++MY +C + A+K+ + + +D VSWN+II A L
Sbjct: 169 VYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLL 228
Query: 218 AESE-----------NFG------KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
+E E F +++EL+ RM V P+ T V+ +C+ ++ +
Sbjct: 229 SELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFV 288
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
GK +H ++++ L + FV +ALV Y +C +++ A FS+ + K S+N +I+GY
Sbjct: 289 GKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLE 348
Query: 321 KSS------------------------------------PTSIFLLIELLQLGYRPNEFT 344
+ ++ L +LL G P+ FT
Sbjct: 349 NGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFT 408
Query: 345 FSHVLRS----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAK-SGLISDALAFVTAL 399
+L + Q ++H + I G ++ +V G+L+ Y K + +I+ +AF
Sbjct: 409 LGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEIS 468
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEV 455
R N + Y R Q + +L+ +++ P++ +WN ++A N Y
Sbjct: 469 E--RDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLA 526
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
++LF M+ + + PD YT +L+ACSKL + G +H + SD + L+D
Sbjct: 527 MQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGY-DSDAHIGATLVD 585
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY KCGSI +++N++++ N++ A+++A ++G + + FR M +PD V
Sbjct: 586 MYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVT 645
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
++VL++C H G ++ G E F M +Y + P + HY C+VDLL R G L EA ++I M
Sbjct: 646 FLSVLSSCVHAGSIKIGYECFYLM-ETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNM 704
Query: 636 PFPPNALIWRTFLEGC 651
P +++ W L GC
Sbjct: 705 PMEADSVTWSALLGGC 720
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 160/622 (25%), Positives = 282/622 (45%), Gaps = 114/622 (18%)
Query: 42 FTFGGLLS-CDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE 99
F F +L+ C L +E G Q+ VLK+G F + +VG AL+ +YG+ G LDE V E
Sbjct: 135 FVFPVVLNICCGLGDLELGRQVHGMVLKHG-FVTNVYVGNALIDMYGKCGSLDEAKKVLE 193
Query: 100 DMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS-NEQDLE 158
M +K V+WNSI++ +G V + + L ++ SE+ ++ VI G S N D+E
Sbjct: 194 GMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVE 253
Query: 159 ----------------------------------FGEQIHGLVIKNGFDYELLVANSLVN 184
G+++HG ++++ VAN+LV
Sbjct: 254 SVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVG 313
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS---------- 234
MY +C + SA K+F + S+NT+I E+ N GKA EL+ +M
Sbjct: 314 MYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRIS 373
Query: 235 -------------------------VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
++ + P+ T ++ A + GK IH+ I
Sbjct: 374 WNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAI 433
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFL 329
L+ + FVG ALV+ Y KC+++ A + F EIS ++ +WNALI GYA + I
Sbjct: 434 VKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRE 493
Query: 330 LIELLQL-GYRPNEFTFSHVL-------RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMT 381
L+E ++ G+ PN +T++ +L + LA QL E + SL
Sbjct: 494 LVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFN-------------EMQVSSLRP 540
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAG-------------IYNRTGQYNETVKLL 428
G+I A + + ++ + V +I AG +Y + G ++
Sbjct: 541 DIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVY 600
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
+++ P++V N ++ A A +G +E + +F+ M +R+ PD+ TF+S+LS+C ++
Sbjct: 601 NKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIK 660
Query: 489 LGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALIS 546
+G L++ I + + C ++D+ + G + + ++ M + + +TW+AL+
Sbjct: 661 IGYECFYLMETYNITPTLKHYTC--MVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLG 718
Query: 547 ALGLN---GFAQRALEKFREME 565
++ + A EK E+E
Sbjct: 719 GCFIHKEVALGEIAAEKLIELE 740
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/498 (25%), Positives = 216/498 (43%), Gaps = 48/498 (9%)
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
L + L G+Q+H IK GF V L+ MY + A MF + ++++ SW
Sbjct: 41 LQSSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSW 100
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVY--VINSCAGLQNSILGKSIHAKV 268
++ F K L+ D + FV+ V+N C GL + LG+ +H V
Sbjct: 101 TAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMV 160
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK---------------------- 306
+K+ +V+VG+AL+D Y KC +L+ A ++ K
Sbjct: 161 LKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEAL 220
Query: 307 -------------NIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVL--- 349
N+V+W+A+I G++S + S+ L ++ G P+ T + VL
Sbjct: 221 DLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPAC 280
Query: 350 -RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
R F +LH I+R + +V +L+ Y + G + A + A
Sbjct: 281 SRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYN 340
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERP----DIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+I G Y G + +L Q+E+ D +SWN +I+ N + + L LF+ +
Sbjct: 341 TMIVG-YLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLM 399
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
I PD++T S+L+ + + + G +H I + + S++FV L++MY KC I
Sbjct: 400 EGIEPDSFTLGSILTGFADMTCIRQGKEIHS-IAIVKGLQSNSFVGGALVEMYCKCNDII 458
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
++ F+E+++R+ TW ALIS + E M+ GF+P+ ++L
Sbjct: 459 AAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLV 518
Query: 585 HGGLVREGMELFERMNRS 602
M+LF M S
Sbjct: 519 ENKQYDLAMQLFNEMQVS 536
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 162/366 (44%), Gaps = 65/366 (17%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQ 60
+R+ +S+N +IS + +DAL +F ++ G EP FT G +L+ D +G +
Sbjct: 368 ERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKE 427
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS--VFEDMPRKSLVTWNSIVSIFGK 118
+ + + GL +++FVG AL+ +Y + C D + + F+++ + TWN+++S + +
Sbjct: 428 IHSIAIVKGL-QSNSFVGGALVEMYCK--CNDIIAAQMAFDEISERDTSTWNALISGYAR 484
Query: 119 ------------------------------HGFVED-----CMFLFCELVRSEVALTESS 143
G VE+ M LF E+ S + +
Sbjct: 485 CNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYT 544
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
++ S + G+Q+H I+ G+D + + +LV+MY +C I +++ +
Sbjct: 545 VGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKIS 604
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
++V N ++ A A + + + ++ RM V P+ TF+ V++SC
Sbjct: 605 NPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSC----------- 653
Query: 264 IHAKVIKNALECDVFVG-----------SALVDFYAKCDNLEGAHLCFSEIS-NKNIVSW 311
+HA IK EC + + +VD ++ L+ A+ + + V+W
Sbjct: 654 VHAGSIKIGYECFYLMETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTW 713
Query: 312 NALILG 317
+AL+ G
Sbjct: 714 SALLGG 719
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/523 (28%), Positives = 264/523 (50%), Gaps = 44/523 (8%)
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
++S + +I +++ L+ QIH ++ G + + L++ I A ++F
Sbjct: 20 SDSFYASLIDSATHKAQLK---QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76
Query: 200 KDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
D+ + WN II + + +F AL +Y M + V P+ TF +++ +C+GL +
Sbjct: 77 DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS--EISNKNIVSWNALILG 317
+G+ +HA+V + + DVFV + L+ YAKC L A F + + IVSW A++
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 318 YASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENY 372
YA P ++ + ++ ++ +P+ VL + Q L+ +H +++MG E
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
+L SL T YAK G ++ A L +++
Sbjct: 257 PDLLISLNTMYAKCGQVATAKI--------------------------------LFDKMK 284
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
P+++ WN +I+ A NG +E +++F M + PD + S +SAC+++ +L S
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
++ + +++ D F+ + LIDM+ KCGS+ + +F+ DR+V+ W+A+I GL+G
Sbjct: 345 MYEYVGRSDY-RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY 612
A+ A+ +R ME G P+ V + +L AC H G+VREG F RM + + P+ HY
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHY 462
Query: 613 HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
CV+DLL R GHL +A ++I MP P +W L C++ R
Sbjct: 463 ACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 505
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 191/350 (54%), Gaps = 6/350 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P + +N+II YSR + +DAL M+ M P FTF LL +C L+ ++ G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE--DMPRKSLVTWNSIVSIF 116
+ A V + G F AD FV L+ LY + L +VFE +P +++V+W +IVS +
Sbjct: 139 RFVHAQVFRLG-FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAY 197
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G + + +F ++ + +V + V V++ + QDL+ G IH V+K G + E
Sbjct: 198 AQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP 257
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ SL MY +C + +A+ +F ++ +++ WN +I A++ +A++++ M
Sbjct: 258 DLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK 317
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+ + I++CA + + +S++ V ++ DVF+ SAL+D +AKC ++EGA
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 297 HLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTF 345
L F ++++V W+A+I+GY + +I L + + G PN+ TF
Sbjct: 378 RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTF 427
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 235/497 (47%), Gaps = 44/497 (8%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ A +L GL + F+ T L+ G + VF+D+PR + WN+I+ + ++
Sbjct: 39 QIHARLLVLGLQFS-GFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+D + ++ + + V+ +F ++ S L+ G +H V + GFD ++ V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEI--RDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
N L+ +Y +C + SA +F+ + + R +VSW I+ A A++ +ALE++ +M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ V V+N+ LQ+ G+SIHA V+K LE + + +L YAKC + A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF- 355
+ F ++ + N++ WNA+I GYA + +I + E++ RP+ + + + +
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 356 ---QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
Q ++ + R Y + ++ +L+ +AK G + A
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL------------------ 379
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+++RT L+R D+V W+ +I +G +E + L++ M ++P++
Sbjct: 380 -VFDRT------------LDR-DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEI-ISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+ LL AC+ + G + +I + C +ID+ G+ G + + ++
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYAC--VIDLLGRAGHLDQAYEVIK 483
Query: 532 EM-TDRNVITWTALISA 547
M V W AL+SA
Sbjct: 484 CMPVQPGVTVWGALLSA 500
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 127/254 (50%), Gaps = 3/254 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEG 58
+P+R +VS+ +I+SAY++ G +AL +F M +P +L+ + + +G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ ASV+K GL + +L +Y + G + +F+ M +L+ WN+++S + K
Sbjct: 242 RSIHASVVKMGLEIEPDLL-ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G+ + + +F E++ +V S I + LE ++ V ++ + ++ +
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+++L++M+ +C + A +F RDVV W+ +I +A+ LY M V
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420
Query: 239 FPNQTTFVYVINSC 252
PN TF+ ++ +C
Sbjct: 421 HPNDVTFLGLLMAC 434
>gi|15217493|ref|NP_177302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169718|sp|Q9C9I3.1|PP115_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71460, chloroplastic; Flags: Precursor
gi|12323723|gb|AAG51819.1|AC016163_8 unknown protein; 45757-47826 [Arabidopsis thaliana]
gi|332197082|gb|AEE35203.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 184/628 (29%), Positives = 305/628 (48%), Gaps = 41/628 (6%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVLKNGL 70
I ++R +E AL + Y+ RG TF LL + + G Q+ + NGL
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS---IFGKHGFVEDCMF 127
++ F+ T L+ +Y G + + VF++ ++ +WN+++ I GK + +D +
Sbjct: 143 E-SNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRY-QDVLS 200
Query: 128 LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYF 187
F E+ V L S V + L G + H L IKNG + + SLV+MYF
Sbjct: 201 TFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYF 260
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFV 246
+C + A ++F ++ RD+V W +I LA ++ +AL L+ M S + ++PN
Sbjct: 261 KCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILT 320
Query: 247 YVINSCAGLQNSILGKSIHAKVIK--NALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
++ ++ LGK +HA V+K N +E FV S L+D Y KC ++ F
Sbjct: 321 TILPVLGDVKALKLGKEVHAHVLKSKNYVE-QPFVHSGLIDLYCKCGDMASGRRVFYGSK 379
Query: 305 NKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCL 363
+N +SW AL+ GYA+ ++ ++ + Q G+RP+ T + VL +
Sbjct: 380 QRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELR------- 432
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
I+ G E + Y L +L ++ VT+L + +Y++ G
Sbjct: 433 AIKQGKEIHCYALKNLFLP---------NVSLVTSLMV------------MYSKCGVPEY 471
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
++L +LE+ ++ +W +I N D + +E+F+ M ++ PD+ T +L+ CS
Sbjct: 472 PIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSD 531
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
L L LG LHG I K E S FV +I MYGKCG + S+ F+ + + +TWTA
Sbjct: 532 LKALKLGKELHGHILKKEF-ESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTA 590
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSY 603
+I A G N + A+ F +M GF P+ AVL+ C G V E F M R Y
Sbjct: 591 IIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMY 650
Query: 604 GVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
++P +HY V++LL R G ++EA+++
Sbjct: 651 NLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/562 (20%), Positives = 242/562 (43%), Gaps = 75/562 (13%)
Query: 10 NSIISAYSRCGYVEDALRMF-------LYMIN---RG--------FEPTQFTF------G 45
++ Y+ CG V+DA ++F +Y N RG ++ TF G
Sbjct: 150 TKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELG 209
Query: 46 GLLSCDSLNPV-----------EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEV 94
L+ SL+ V +G + A +KNGLF + F+ T+L+ +Y + G +
Sbjct: 210 VDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNS-VFLKTSLVDMYFKCGKVGLA 268
Query: 95 VSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG-LSN 153
VF+++ + +V W ++++ + + + LF ++ E S + I L +
Sbjct: 269 RRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGD 328
Query: 154 EQDLEFGEQIHGLVIKN-GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNT 212
+ L+ G+++H V+K+ + + V + L+++Y +C + S ++F + R+ +SW
Sbjct: 329 VKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTA 388
Query: 213 IIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
++ A + F +AL + M + P+ T V+ CA L+ GK IH +KN
Sbjct: 389 LMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNL 448
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE 332
+V + ++L+ Y+KC E F + +N+ +W A+I Y + +
Sbjct: 449 FLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFR 508
Query: 333 LLQLG-YRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
L+ L +RP+ T VL + L +LH I++ +E+ +V ++ Y K G
Sbjct: 509 LMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCG 568
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
+ A A+ + + ++W +I A
Sbjct: 569 DLRSANFSFDAVAVKGS--------------------------------LTWTAIIEAYG 596
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
N +++ + F+ M + P+ +TF ++LS CS+ + L+ + +
Sbjct: 597 CNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSE 656
Query: 508 FVCNMLIDMYGKCGSIGSSVKI 529
+++I++ +CG + + ++
Sbjct: 657 EHYSLVIELLNRCGRVEEAQRL 678
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 129/253 (50%), Gaps = 3/253 (1%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGAQ 60
RN +S+ +++S Y+ G + ALR ++M GF P T +L C L + +G +
Sbjct: 380 QRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKE 439
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ LKN LF + + T+L+ +Y + G + + +F+ + ++++ W +++ + ++
Sbjct: 440 IHCYALKN-LFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENC 498
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + +F ++ S+ + V+ S+ + L+ G+++HG ++K F+ V+
Sbjct: 499 DLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSA 558
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
++ MY +C + SA F V ++ ++W II A +E F A+ + +M P
Sbjct: 559 RIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTP 618
Query: 241 NQTTFVYVINSCA 253
N TF V++ C+
Sbjct: 619 NTFTFTAVLSICS 631
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 188/657 (28%), Positives = 317/657 (48%), Gaps = 53/657 (8%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQL 61
PD + +N +I Y + G+ E+ L F M + + G Q+
Sbjct: 124 PD--ITVWNPVIDGYFKYGHFEEGLAQFCRMQELSWY-----------------MAGRQI 164
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKHG 120
+++N +F D ++ TAL+G+Y E S+F + R ++V WN ++ F ++G
Sbjct: 165 HGYIIRN-MFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENG 223
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
E + L+ L +SF G S+ + L+FG Q+H VIK F + V
Sbjct: 224 MWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCT 283
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL+ MY + + A+K+F V ++V N +I A + AL LY +M
Sbjct: 284 SLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPV 343
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T +++ C+ + + G+++HA+VIK +++ +V + SAL+ Y KC + E A F
Sbjct: 344 DSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVF 403
Query: 301 SEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
+ +++V+W ++I G+ ++ ++ L + + G + + + V+ + L
Sbjct: 404 YTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGL------ 457
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
G EN E LG L+ +A K GL SD V A + +Y++
Sbjct: 458 --------GLENVE--LGHLIHGFAIKRGLESD-------------VFVACSLVDMYSKF 494
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
G + S + ++V+WN +I+ + NG + + L + Y D+ + ++L
Sbjct: 495 GFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVL 554
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
A S + L G +LH + +I SD V N LIDMY KCG + + IF M RN+
Sbjct: 555 VAVSSVAALLKGKTLHAYQIRLQI-PSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNL 613
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
+TW ++I+ G +G + A+ F+EM+ PD V +A++T+C H G+V EG+ LF+
Sbjct: 614 VTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQL 673
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
M YGVEP M+HY VVDLL R G L +A I MP + +W L C+ R
Sbjct: 674 MRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHR 730
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 142/557 (25%), Positives = 252/557 (45%), Gaps = 79/557 (14%)
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
NS + + G + L + S + + +F ++ ++ +L G IH ++
Sbjct: 24 NSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVT 83
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMF-KDVEIR----DVVSWNTIIGALAESENFG 224
G + +A SL+NMY +C + SA ++F K E R D+ WN +I + +F
Sbjct: 84 MGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFE 143
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
+ L + RM L + G+ IH +I+N E D ++ +AL+
Sbjct: 144 EGLAQFCRMQ-------------------ELSWYMAGRQIHGYIIRNMFEGDPYLETALI 184
Query: 285 DFYAKCDNLEGAHLCFSEISNK-NIVSWNALILGYASKSSPTSIFLLIELLQLGYRPN-- 341
Y+ C A F ++ N+ NIV+WN +I G+ +EL L N
Sbjct: 185 GMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKS---LELYSLAKNENCK 241
Query: 342 --EFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
+F+ + ++L Q+HC +I+M +++ YV SL+T YAKSG + DA
Sbjct: 242 LVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDA--- 298
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
K+ Q+ ++ N +I+A NG +
Sbjct: 299 -----------------------------KKVFDQVLDKEVELRNAMISAFIGNGRAYDA 329
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLI 514
L L+ M+A D++T SLLS CS + + G ++H +IK++ + S+ + + L+
Sbjct: 330 LGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRS--MQSNVAIQSALL 387
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
MY KCGS + +F M +R+V+ W ++I+ N + AL+ FR ME G K D
Sbjct: 388 TMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSD 447
Query: 575 ALIAVLTACRHGGLVREGMELFERMNR---SYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ +V++A GL E +EL ++ G+E ++ +VD+ ++G + AE +
Sbjct: 448 VMTSVISA----GLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMV 503
Query: 632 ITTMPFPPNALIWRTFL 648
++MP N + W + +
Sbjct: 504 FSSMP-NKNLVAWNSMI 519
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 198/455 (43%), Gaps = 58/455 (12%)
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
S N+ I AL + + +ALEL+ + + + TF ++ +CA L N G++IHA +
Sbjct: 22 SINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASI 81
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-----NIVSWNALILGYASKSS 323
+ L+ D ++ ++L++ Y KC L A F ++S +I WN +I GY
Sbjct: 82 VTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGH 141
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSY 383
E L R E ++ R Q+H IIR +E Y+ +L+
Sbjct: 142 ------FEEGLAQFCRMQELSWYMAGR--------QIHGYIIRNMFEGDPYLETALI--- 184
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIV 442
G+Y+ + E L +LE R +IV+WN++
Sbjct: 185 -----------------------------GMYSSCSRPMEAWSLFGKLENRSNIVAWNVM 215
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
I NG +++ LEL+ + + +F +ACS L G +H + K
Sbjct: 216 IGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMN- 274
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
D +VC L+ MY K GS+ + K+F+++ D+ V A+ISA NG A AL +
Sbjct: 275 FQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYN 334
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELF-ERMNRSYGVEPEMDHYHCVVDLLVR 621
+M+ D + ++L+ C G G + E + RS ++ + ++ + +
Sbjct: 335 KMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRS--MQSNVAIQSALLTMYYK 392
Query: 622 YGHLKEAEKIITTMPFPPNALIWRTFLEG-CQRCR 655
G ++A+ + TM + + W + + G CQ R
Sbjct: 393 CGSTEDADSVFYTMK-ERDVVAWGSMIAGFCQNRR 426
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 93/162 (57%), Gaps = 3/162 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEG 58
MP++N+V++NS+IS YS G E ++ + ++ GF + +L S ++G
Sbjct: 507 MPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKG 566
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L A ++ + +D V AL+ +Y + GCL +FE+MPR++LVTWNS+++ +G
Sbjct: 567 KTLHAYQIRLQI-PSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGS 625
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
HG E+ + LF E+ RSE A E +F+ +I S+ +E G
Sbjct: 626 HGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEG 667
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
MP RN+V++NS+I+ Y G E+A+R+F M P + TF L+ SC V EG
Sbjct: 608 MPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEG 667
Query: 59 AQL-QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP 102
L Q ++ G+ + ++ L GR G LD+ S MP
Sbjct: 668 LNLFQLMRIEYGVEPRMEHYAS-VVDLLGRAGRLDDAYSFIRGMP 711
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 174/604 (28%), Positives = 291/604 (48%), Gaps = 40/604 (6%)
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
+P G L +LK+G D F LL Y G L++ +F++MP + V++ ++
Sbjct: 18 DPNAGKSLHCHILKHGA-SLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLA 76
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
F + + L L R + + F ++ L + + +H V K G
Sbjct: 77 QGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQ 136
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ V +L++ Y C + +A ++F + +D+VSW ++ AE+ +L L+ +M
Sbjct: 137 ADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQM 196
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ PN T + SC GL+ +GKS+H +K + D++VG AL++ Y K +
Sbjct: 197 RIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEI 256
Query: 294 EGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYR-PNEFTFSHVLRS 351
A F E+ +++ W+ +I YA S S ++ L + Q PN FTF+ VL++
Sbjct: 257 AEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQA 316
Query: 352 SLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ LL Q+H ++++G ++ +V +LM YAK
Sbjct: 317 CASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAK---------------------- 354
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
G+ +VKL + + V+WN +I GD ++ L LF M I
Sbjct: 355 ----------CGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDI 404
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P T+ S+L A + L L G +H L KT + + D+ V N LIDMY KCG I +
Sbjct: 405 QPTEVTYSSVLRASASLVALEPGRQIHSLTIKT-MYNKDSVVANSLIDMYAKCGRIDDAR 463
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
F++M ++ ++W ALI ++G AL F M+ KP+++ + VL+AC + G
Sbjct: 464 LTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAG 523
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
L+ +G F+ M + YG+EP ++HY C+V LL R G EA K+I +PF P+ ++WR
Sbjct: 524 LLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRAL 583
Query: 648 LEGC 651
L C
Sbjct: 584 LGAC 587
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 174/578 (30%), Positives = 280/578 (48%), Gaps = 55/578 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP N VSF ++ +SR + A R+ L + G+E QF F LL S++ +
Sbjct: 64 MPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTC 123
Query: 60 -QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A V K G ADAFVGTAL+ Y G +D VF+ + K +V+W +V+ + +
Sbjct: 124 LSVHAYVYKLG-HQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAE 182
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ ED + LFC++ + + + + + G+ +HG +K +D +L V
Sbjct: 183 NYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYV 242
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDI 237
+L+ +Y + I A++ F+++ D++ W+ +I A+S+ +ALEL+ RM +
Sbjct: 243 GIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSV 302
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN TF V+ +CA L LG IH+ V+K L+ +VFV +AL+D YAKC +E +
Sbjct: 303 VVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSV 362
Query: 298 LCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F+ + KN V+WN +I+GY ++ L +L L +P E T+S VLR+S +
Sbjct: 363 KLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLV 422
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANII 411
L Q+H L I+ Y V SL+ YAK G I DA L F
Sbjct: 423 ALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTF---------------- 466
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++++ D VSWN +I + +G E L LF M+ + P+
Sbjct: 467 -----------------DKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNK 509
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKI 529
TFV +LSACS L G + + + I + + C ++ + G+ G +VK+
Sbjct: 510 LTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTC--MVWLLGRSGQFDEAVKL 567
Query: 530 FNEMT-DRNVITWTALISALGLNG-------FAQRALE 559
E+ +V+ W AL+ A ++ AQR LE
Sbjct: 568 IGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLE 605
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 218/450 (48%), Gaps = 39/450 (8%)
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
+ S+ ++ +D G+ +H ++K+G +L N L+N Y + A K+
Sbjct: 1 MDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKL 60
Query: 199 FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
F ++ + + VS+ T+ + S F +A L LR+ + NQ F ++ + +
Sbjct: 61 FDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLA 120
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
S+HA V K + D FVG+AL+D Y+ C N++ A F I K++VSW ++ Y
Sbjct: 121 DTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACY 180
Query: 319 ASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYE 373
A S+ L ++ +GYRPN FT S L+S + + +H +++ Y+
Sbjct: 181 AENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDL 240
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
YV +L+ Y KSG I++A F ++ +
Sbjct: 241 YVGIALLELYTKSGEIAEAQQF--------------------------------FEEMPK 268
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSS 492
D++ W+++I+ A + KE LELF MR + + P+N+TF S+L AC+ L L LG+
Sbjct: 269 DDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQ 328
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+H + K + S+ FV N L+D+Y KCG I +SVK+F T++N + W +I G
Sbjct: 329 IHSCVLKVG-LDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLG 387
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTA 582
++AL F M L +P V +VL A
Sbjct: 388 DGEKALNLFSNMLGLDIQPTEVTYSSVLRA 417
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 178/621 (28%), Positives = 299/621 (48%), Gaps = 42/621 (6%)
Query: 41 QFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFED 100
+F L++C +L V QASV +G+ + V L+ Y + LD+ +F+
Sbjct: 82 KFYISALVNCRNLTQVRQVHAQASV--HGML-ENIVVANKLIYFYSYYRALDDAYGLFDG 138
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
M + V+W+ +V F K G +C F EL+R + VI + ++L+
Sbjct: 139 MCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM- 197
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
+LV+MY +C I A +F ++ RD+V+W +IG AE
Sbjct: 198 --------------------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAEC 237
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
++L L+ +M + V P++ V V+ +CA L + I + + + DV +G
Sbjct: 238 GKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG 297
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYR 339
+A++D YAKC +E A F + KN++SW+A+I Y ++ L +L G
Sbjct: 298 TAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGML 357
Query: 340 PNEFTFSHVLRSSLA----FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
P++ T + +L + + Q+ Q+H G V L+ Y+ + DA
Sbjct: 358 PDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGL 417
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL----ERPDIVSWNIVIAACAHNGD 451
+ + R V +++ G + + G Y +L RPD N + C G+
Sbjct: 418 FDGMCV-RDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPD----NYTLPFC---GN 469
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
E L LF MR + PD V+++ AC+KL + ++ I++ + D +
Sbjct: 470 ANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKF-QLDVILGT 528
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
+IDM+ KCG + S+ +IF+ M ++NVI+W+A+I+A G +G ++AL+ F M G P
Sbjct: 529 AMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILP 588
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+++ L+++L AC H GLV EG+ F M Y V ++ HY CVVDLL R G L EA K+
Sbjct: 589 NKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKL 648
Query: 632 ITTMPFPPNALIWRTFLEGCQ 652
I +M + +W FL C+
Sbjct: 649 IESMTVEKDEGLWGAFLGACR 669
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 37/289 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL----SCDSLNPV 56
M ++NV+S++++I+AY G AL +F M++ G P + T LL +C +L V
Sbjct: 320 MEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQV 379
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
QASV +G+ + V L+ Y + LD+ +F+ M + V+W+ +V F
Sbjct: 380 RQVHAQASV--HGML-QNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGF 436
Query: 117 GKHGFVEDCMFLFCELVR----------------------------SEVALTESSFVGVI 148
K G +C F EL+R V + + V V+
Sbjct: 437 AKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVV 496
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
+ + I + + F ++++ ++++M+ +C + SA ++F +E ++V+
Sbjct: 497 FACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVI 556
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC--AGL 255
SW+ +I A KAL+L+ M + PN+ T V ++ +C AGL
Sbjct: 557 SWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGL 605
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
M ++NV+S++++I+AY G AL +F M+ G P + T LL +C V EG
Sbjct: 550 MEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEG 609
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM 101
+ + + ++ AD T ++ L GR G LDE + + E M
Sbjct: 610 LRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESM 652
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 161/497 (32%), Positives = 261/497 (52%), Gaps = 43/497 (8%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
G +IH + G D ++ VA ++ MY +C + +A+++F++++ RD+V+W+ II A +
Sbjct: 7 GTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQ 66
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
S +AL L+ M + + N+ + + +CA + + LGKS+H +K ++ D+ V
Sbjct: 67 SGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISV 126
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-Y 338
G+ALV YAKC A F+ + K++V+WNA+I GYA P + LQL
Sbjct: 127 GTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSEL 186
Query: 339 RPNEFTFSHVLRSSLAFQLLQ-------LHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
PN T +L AF LL +H II+ G+E+ +V +L+ YAK G +S
Sbjct: 187 NPNSGTMVGLLP---AFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSG 243
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
A +++RTG R D VSWN++IA H+G
Sbjct: 244 A-------------------EFLFHRTGC------------RKDEVSWNVMIAGYMHSGH 272
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+ F M+ I P+ T V++L A + L L G +LH + + S T V N
Sbjct: 273 AIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGF-QSKTPVGN 331
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
LIDMY KCG + S KIF+EM +++ ++W +++ ++G A+E F M+ +
Sbjct: 332 CLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRL 391
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D + I VL+ACRH GL+ EG ++F+ M++ + +EP+++HY C+ DLL R G E +
Sbjct: 392 DSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPDLEHYACMADLLGRAGLFNEVLDL 451
Query: 632 ITTMPFPPNALIWRTFL 648
I +MP P+A +W L
Sbjct: 452 IKSMPMEPDAGVWGALL 468
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 231/503 (45%), Gaps = 42/503 (8%)
Query: 73 ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL 132
+D V T ++ +Y R G +D +F+++ + LV W++I++ F + G+ ++ + LF +
Sbjct: 21 SDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSGYPQEALSLFRSM 80
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
+ + + + + L+ G+ +H +K D ++ V +LV+MY +C
Sbjct: 81 QNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVSMYAKCGFF 140
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
A +F + +DVV+WN +I A+ ALE++ ++ + + PN T V ++ +
Sbjct: 141 ALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPNSGTMVGLLPAF 200
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS-NKNIVSW 311
A L + G IH K+IK E + V +AL+D YAKC +L GA F K+ VSW
Sbjct: 201 ALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSW 260
Query: 312 NALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIR 366
N +I GY F ++L +PN T VL + L+ LH +IR
Sbjct: 261 NVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIR 320
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
MG+++ V L+ YAK G + + + K
Sbjct: 321 MGFQSKTPVGNCLIDMYAKCGWL--------------------------------DHSEK 348
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+ +++ D VSWN+++A A +G +ELF M+ + I D+++F+++LSAC
Sbjct: 349 IFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGL 408
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALI 545
+ G + + K + D + D+ G+ G + + M + + W AL+
Sbjct: 409 IGEGRKIFDSMSKQHQLEPDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALL 468
Query: 546 SALGLNG---FAQRALEKFREME 565
A ++ A+ AL ++E
Sbjct: 469 GASTMHSNVQLAEFALHHLDKLE 491
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 228/485 (47%), Gaps = 43/485 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQ-FTFGGLLSCDSLNPVE-GAQL 61
R++V++++II+A+ + GY ++AL +F M N G + + L +C ++ ++ G +
Sbjct: 52 RDLVAWSAIIAAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSM 111
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+K + D VGTAL+ +Y + G +++F MP K +VTWN++++ + + G
Sbjct: 112 HCCAVKANVDL-DISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGE 170
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ +F +L SE+ + VG++ + DL+ G IHG +IK GF+ E V +
Sbjct: 171 PFPALEMFHKLQLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTA 230
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
L++MY +C + AE +F R D VSWN +I S + A + +M ++ + P
Sbjct: 231 LIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQP 290
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N T V V+ + A L G ++HA VI+ + VG+ L+D YAKC L+ + F
Sbjct: 291 NIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIF 350
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQ 359
E+ NK+ VSWN ++ GYA + L +Q R + F+F +VL
Sbjct: 351 HEMKNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVL---------- 400
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIY 415
++ +GLI + +++ + P +A +
Sbjct: 401 ---------------------SACRHAGLIGEGRKIFDSMSKQHQLEPDLEHYACMADLL 439
Query: 416 NRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
R G +NE + L+ + PD W ++ A + + + L F ++ N T
Sbjct: 440 GRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQ--LAEFALHHLDKLEHKNLTH 497
Query: 475 VSLLS 479
+ LS
Sbjct: 498 YAALS 502
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 134/260 (51%), Gaps = 6/260 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
MP ++VV++N++I+ Y++ G AL MF + P T GLL +L + +G
Sbjct: 150 MPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPNSGTMVGLLPAFALLNDLDQG 209
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
+ + ++K G F ++ V TAL+ +Y + G L +F RK V+WN +++ +
Sbjct: 210 SCIHGKIIKCG-FESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYM 268
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G D FC++ + + V V+ +++ L G +H VI+ GF +
Sbjct: 269 HSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTP 328
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N L++MY +C + +EK+F +++ +D VSWN ++ A A+EL+ RM
Sbjct: 329 VGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQDSE 388
Query: 238 VFPNQTTFVYVINSC--AGL 255
+ + +F+ V+++C AGL
Sbjct: 389 IRLDSFSFINVLSACRHAGL 408
>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 944
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 190/667 (28%), Positives = 324/667 (48%), Gaps = 58/667 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE----------PTQFTFGGLLSC 50
MP ++ V +N++IS S+ +AL MF M GFE P G + C
Sbjct: 160 MPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCC 219
Query: 51 DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWN 110
S + G ++ S+ V +L+ +Y + G + VF+ M + V+W
Sbjct: 220 KS---IHGYVVRRSIC--------GVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWA 268
Query: 111 SIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
++++ + K+G + + L ++ R V + + + V + ++ +DLE G++I+ ++
Sbjct: 269 TMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQM 328
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
G +++VA +V MY +C + A ++F +E RD+V+W+ + AL E+ + L ++
Sbjct: 329 GLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIF 388
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
M + + P++ +++ C + N LGK +H IK +E D+ + + LV Y +
Sbjct: 389 QVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRF 448
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVL 349
+ A F+ + K+IV WN LI G+ P + LQL G P+ T +
Sbjct: 449 ELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLF 508
Query: 350 RSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+ L L H I + G+E+ +V +LM YAK G +
Sbjct: 509 SACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSV------------- 555
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
E + LL++ + D VSWN++IA HNG E + F+ M+
Sbjct: 556 -----------------ERLFLLTKHVK-DEVSWNVMIAGYLHNGYSNEAISTFRRMKLE 597
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ P+ TFV++L A S L L + H I + +S T + N LIDMY KCG +
Sbjct: 598 NVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSC-TLIGNSLIDMYAKCGQLRY 656
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
S K F+EM +++ I+W A++SA ++G + A+ F M+ + D V+ I+VL+ACRH
Sbjct: 657 SEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRH 716
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GL++EG ++F M + VEP M+HY C+VDLL G E ++ M P+A +W
Sbjct: 717 SGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWG 776
Query: 646 TFLEGCQ 652
L C+
Sbjct: 777 ALLAACK 783
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 171/660 (25%), Positives = 320/660 (48%), Gaps = 50/660 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDS-LNPVEG 58
+ + +++ +NS I AYS+ + A+ ++ ++ G +P +FTF +L +C S L+ EG
Sbjct: 59 IKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDFHEG 118
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ ++ NGL C D ++GT+L+ ++ + GCLD +VF+ MP K V WN+++S +
Sbjct: 119 VNIYKDIVFNGLEC-DVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQ 177
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + +F + + + S + + +S D+ + IHG V++ +V
Sbjct: 178 SLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICG--VV 235
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+NSL++MY +C + SA+++F + +RD VSW T++ ++ + + L+L +M V
Sbjct: 236 SNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNV 295
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N+ V + A +++ GK I+ ++ L D+ V + +V YAKC L+ A
Sbjct: 296 KMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARE 355
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F + +++V+W+A + P + + +++Q G +P++ S
Sbjct: 356 LFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILS----------- 404
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+++ E LG +M YA + ++ VT L +Y R
Sbjct: 405 -----ILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTL------------VSMYIR 447
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
+ + L ++++ DIV WN +I GD LE+F ++ + I PD+ T V L
Sbjct: 448 FELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGL 507
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD-R 536
SAC+ + +L LG+ LHG I+K+ SD V L+DMY KCGS+ S ++F +
Sbjct: 508 FSACAIMDDLDLGTCLHGGIEKSG-FESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVK 566
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+ ++W +I+ NG++ A+ FR M+ +P+ V + +L A + ++RE M
Sbjct: 567 DEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFH 626
Query: 597 ERMNRSYGVEPEMDHYHC------VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ R M C ++D+ + G L+ +EK M + + W L
Sbjct: 627 TCIIR-------MGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEME-NKDTISWNAMLSA 678
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 127/559 (22%), Positives = 258/559 (46%), Gaps = 33/559 (5%)
Query: 93 EVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS 152
++ + F + SL+ +NS + + K + L+ +++ + + +F V+ +
Sbjct: 51 QIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACT 110
Query: 153 NEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNT 212
+ D G I+ ++ NG + ++ + SL++M+ + + +A +F + ++D V WN
Sbjct: 111 SALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNA 170
Query: 213 IIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
+I L++S N +ALE++ RM ++ ++ + + + + + L + KSIH V++ +
Sbjct: 171 MISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRS 230
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE 332
+ C V V ++L+D Y KC ++ A F + ++ VSW ++ GY L+
Sbjct: 231 I-CGV-VSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLH 288
Query: 333 LLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
++ G + N+ + L + L+ G E Y Y L + GL+SD
Sbjct: 289 KMRRGNVKMNKVAVVNALLVVAEMRDLE-------KGKEIYNYAL--------QMGLMSD 333
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
+V A I +Y + G+ + +L LE D+V+W+ ++A G
Sbjct: 334 -------------IVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGY 380
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+EVL +F+ M+ + PD L+S C+++ N+ LG +H K + + SD +
Sbjct: 381 PREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKAD-MESDISMVT 439
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
L+ MY + ++ +FN M ++++ W LI+ G ALE F ++ G P
Sbjct: 440 TLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILP 499
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D ++ + +AC + G L + +S G E ++ ++D+ + G L E++
Sbjct: 500 DSGTMVGLFSACAIMDDLDLGTCLHGGIEKS-GFESDIHVKVALMDMYAKCGSLCSVERL 558
Query: 632 ITTMPFPPNALIWRTFLEG 650
+ + W + G
Sbjct: 559 FLLTKHVKDEVSWNVMIAG 577
>gi|414865182|tpg|DAA43739.1| TPA: hypothetical protein ZEAMMB73_281838 [Zea mays]
Length = 1925
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 185/655 (28%), Positives = 321/655 (49%), Gaps = 73/655 (11%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQL 61
P +++VSFNS+ISAY + ++A +F M P T +L
Sbjct: 302 PVKDLVSFNSMISAYMQHHIWKEAFEIFRLMHCVAVRPNLVTVVSVLPS----------- 350
Query: 62 QASVLKNGLFCADAF---VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
C+D F G ++ G+ + G L E VSV +++VS++ K
Sbjct: 351 ----------CSDFFGINHGESVHGMIIKLG-LAEHVSV-----------ASALVSMYSK 388
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ + LFC V A ++ + VI G +DL + IH ++N F+ V
Sbjct: 389 LGKLDSSLLLFCCCV----APDATTIMNVISGCRYTKDLHMAKSIHAYAVRNKFESYHSV 444
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+ MY C I ++ +F+ +E+R ++SWNT+I AE + L L+ +M + V
Sbjct: 445 MNALLAMYADCRDISTSHTLFQKMEVRMLISWNTMISGFAEIGDSDTCLILFCQMFHEEV 504
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ T + +I+S + ++I+G+S+H+ IK+ DV + +AL+ YA C +E
Sbjct: 505 QFDLVTLIGLISSFSVPGDAIVGESVHSLAIKSGCNSDVSLTNALITMYANCGIVEAGQQ 564
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F ++N +++NAL+ GY + I L ++++ +PN T ++L +
Sbjct: 565 LFDSCCSRNTITYNALMSGYRKNNISAKILPLFYQMVENDEKPNLVTLLNLL--PVCQSQ 622
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
LQ C I N+ + L TS G+Y+R
Sbjct: 623 LQGKC-IHSYAVRNFTRLETPLFTS----------------------------AMGMYSR 653
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
K+ S + +++ WN ++AC V++ FK+M + PD T ++L
Sbjct: 654 FNNIEYCSKIFSLIGARNLIVWNAFLSACVQCKQADMVVDCFKHMLFLNVRPDAVTMLAL 713
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
+SACS+L N + + +I + + S++ V N LID + +CGSI + ++F+ +++
Sbjct: 714 ISACSQLGNAYFAACIMAVILQ-KGFSTNILVLNALIDTHSRCGSISLARELFDSSVEKD 772
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+TW A+I+A ++G + AL+ F M G PD + +++L+AC H GLV +G LF+
Sbjct: 773 SVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACAHNGLVEQGRTLFK 832
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ YG+ P M+HY C+VDLL R GHL EA ++ +MPF P+ + + L C+
Sbjct: 833 SLQADYGITPRMEHYACMVDLLGRTGHLDEAYDVVRSMPFRPSDNLLESLLGACR 887
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 159/629 (25%), Positives = 279/629 (44%), Gaps = 57/629 (9%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDM--PRKSLVTWNSIVSIFGKHGFVEDCMFLFCE 131
D FV T L+ Y G +F + R ++ + N V F HGF + + L+ E
Sbjct: 72 DTFVVTGLVERYVYFGKAASAALLFAETYRSRPAVYSLNLAVRCFSDHGFHRELLHLYRE 131
Query: 132 LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
L +F VI + L G ++H V++ G + V +L+++Y +
Sbjct: 132 LCC--FGSDNFTFPPVIRACTAVSCLRLGREMHCRVLRTGHGGNVGVQTALLDLYAKAGQ 189
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
I + ++F + +RD++SWN ++ + +E F +A+E+ M + PN +TFV ++
Sbjct: 190 IDVSRRVFDCMVLRDLISWNAMVSGYSLNECFREAVEMLQEMQQGGMRPNASTFVGIVGM 249
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
C + + +G S+HA +K + D + SAL+ YA D+L + + F K++VS+
Sbjct: 250 CGSVGDRDVGDSLHAFALKGGVINDESLTSALITMYAAFDDLSSSRMVFDLHPVKDLVSF 309
Query: 312 NALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAF----QLLQLHCLIIR 366
N++I Y F + L+ + RPN T VL S F +H +II+
Sbjct: 310 NSMISAYMQHHIWKEAFEIFRLMHCVAVRPNLVTVVSVLPSCSDFFGINHGESVHGMIIK 369
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG------------- 413
+G + V +L++ Y+K G + +L P A N+I+G
Sbjct: 370 LGLAEHVSVASALVSMYSKLGKLDSSLLLFCCCVAPDATTIMNVISGCRYTKDLHMAKSI 429
Query: 414 ----IYNRTGQYNETVK-----------------LLSQLERPDIVSWNIVIAACAHNGDY 452
+ N+ Y+ + L ++E ++SWN +I+ A GD
Sbjct: 430 HAYAVRNKFESYHSVMNALLAMYADCRDISTSHTLFQKMEVRMLISWNTMISGFAEIGDS 489
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
L LF M + D T + L+S+ S + +G S+H L K+ +SD + N
Sbjct: 490 DTCLILFCQMFHEEVQFDLVTLIGLISSFSVPGDAIVGESVHSLAIKSG-CNSDVSLTNA 548
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
LI MY CG + + ++F+ RN IT+ AL+S N + + L F +M KP+
Sbjct: 549 LITMYANCGIVEAGQQLFDSCCSRNTITYNALMSGYRKNNISAKILPLFYQMVENDEKPN 608
Query: 573 RVALIAVLTACRHGGLVREGMELFERMNRSYGVEP----EMDHYHCVVDLLVRYGHLKEA 628
V L+ +L C+ +L + SY V E + + + R+ +++
Sbjct: 609 LVTLLNLLPVCQS--------QLQGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYC 660
Query: 629 EKIITTMPFPPNALIWRTFLEGCQRCRIA 657
KI + + N ++W FL C +C+ A
Sbjct: 661 SKIFSLIG-ARNLIVWNAFLSACVQCKQA 688
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 148/591 (25%), Positives = 253/591 (42%), Gaps = 79/591 (13%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
R+++S+N+++S YS +A+ M M G P TF G++ C S+ + G L
Sbjct: 203 RDLISWNAMVSGYSLNECFREAVEMLQEMQQGGMRPNASTFVGIVGMCGSVGDRDVGDSL 262
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A LK G+ D + +AL+ +Y L VF+ P K LV++NS++S + +H
Sbjct: 263 HAFALKGGVI-NDESLTSALITMYAAFDDLSSSRMVFDLHPVKDLVSFNSMISAYMQHHI 321
Query: 122 VEDCMFLF----CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ +F C VR + + V V+ S+ + GE +HG++IK G +
Sbjct: 322 WKEAFEIFRLMHCVAVRPNLV----TVVSVLPSCSDFFGINHGESVHGMIIKLGLAEHVS 377
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VA++LV+MY + GK L+ L +
Sbjct: 378 VASALVSMYSK----------------------------------LGK-LDSSLLLFCCC 402
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ TT + VI+ C ++ + KSIHA ++N E V +AL+ YA C ++ +H
Sbjct: 403 VAPDATTIMNVISGCRYTKDLHMAKSIHAYAVRNKFESYHSVMNALLAMYADCRDISTSH 462
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F ++ + ++SWN +I G+A + +L F + + F L
Sbjct: 463 TLFQKMEVRMLISWNTMISGFAEIGDSDTCLIL--------------FCQMFHEEVQFDL 508
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+ L LI V S+ + KSG SD V N + +Y
Sbjct: 509 VTLIGLISSFSVPGDAIVGESVHSLAIKSGCNSD-------------VSLTNALITMYAN 555
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G +L + +++N +++ N ++L LF M P+ T ++L
Sbjct: 556 CGIVEAGQQLFDSCCSRNTITYNALMSGYRKNNISAKILPLFYQMVENDEKPNLVTLLNL 615
Query: 478 LSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
L C G +H ++ + + F M MY + +I KIF+ + R
Sbjct: 616 LPVCQSQLQ---GKCIHSYAVRNFTRLETPLFTSAM--GMYSRFNNIEYCSKIFSLIGAR 670
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
N+I W A +SA A ++ F+ M FL +PD V ++A+++AC G
Sbjct: 671 NLIVWNAFLSACVQCKQADMVVDCFKHMLFLNVRPDAVTMLALISACSQLG 721
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 110/525 (20%), Positives = 224/525 (42%), Gaps = 72/525 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
M R ++S+N++IS ++ G + L +F M + + T GL+S S+ + + G
Sbjct: 468 MEVRMLISWNTMISGFAEIGDSDTCLILFCQMFHEEVQFDLVTLIGLISSFSVPGDAIVG 527
Query: 59 AQLQASVLKNGLFC-ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+ + +K+G C +D + AL+ +Y G ++ +F+ ++ +T+N+++S +
Sbjct: 528 ESVHSLAIKSG--CNSDVSLTNALITMYANCGIVEAGQQLFDSCCSRNTITYNALMSGYR 585
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
K+ + LF ++V ++ + + V +++ L Q G+ IH ++N E
Sbjct: 586 KNNISAKILPLFYQMVEND---EKPNLVTLLNLLPVCQSQLQGKCIHSYAVRNFTRLETP 642
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ S + MY + I K+F + R+++ WN + A + + ++ + M
Sbjct: 643 LFTSAMGMYSRFNNIEYCSKIFSLIGARNLIVWNAFLSACVQCKQADMVVDCFKHMLFLN 702
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ T + +I++C+ L N+ I A +++ ++ V +AL+D +++C ++ A
Sbjct: 703 VRPDAVTMLALISACSQLGNAYFAACIMAVILQKGFSTNILVLNALIDTHSRCGSISLAR 762
Query: 298 LCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F K+ V+W A+I Y+ + ++ L ++ G P++ TF
Sbjct: 763 ELFDSSVEKDSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFV---------- 812
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
S++++ A +GL+ +L + P
Sbjct: 813 ---------------------SILSACAHNGLVEQGRTLFKSLQADYGITP--------- 842
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
R Y V LL + D E + +R+ P + S
Sbjct: 843 RMEHYACMVDLLGRTGHLD---------------------EAYDVVRSMPFRPSDNLLES 881
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
LL AC N +G S+ L+ K+E S ++V ML ++Y G
Sbjct: 882 LLGACRFHGNYKIGESIGKLLIKSEYGKSRSYV--MLSNIYASAG 924
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 149/334 (44%), Gaps = 52/334 (15%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI--SNKNIVSWNALILGYA 319
+ +HA + D FV + LV+ Y A L F+E S + S N + ++
Sbjct: 58 RELHAHLAVAGAIQDTFVVTGLVERYVYFGKAASAALLFAETYRSRPAVYSLNLAVRCFS 117
Query: 320 SKSSPTSIFLLIELLQLGYR------PNEFTFSHVLRSSLAFQLLQL----HCLIIRMGY 369
ELL L YR + FTF V+R+ A L+L HC ++R G+
Sbjct: 118 DHG------FHRELLHL-YRELCCFGSDNFTFPPVIRACTAVSCLRLGREMHCRVLRTGH 170
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
V +L+ YAK+G I ++ R V ++
Sbjct: 171 GGNVGVQTALLDLYAKAGQI----------DVSRRVFDCMVLR----------------- 203
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
D++SWN +++ + N ++E +E+ + M+ + P+ TFV ++ C + + +
Sbjct: 204 -----DLISWNAMVSGYSLNECFREAVEMLQEMQQGGMRPNASTFVGIVGMCGSVGDRDV 258
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G SLH K +I +D + + LI MY + SS +F+ ++++++ ++ISA
Sbjct: 259 GDSLHAFALKGGVI-NDESLTSALITMYAAFDDLSSSRMVFDLHPVKDLVSFNSMISAYM 317
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ + A E FR M + +P+ V +++VL +C
Sbjct: 318 QHHIWKEAFEIFRLMHCVAVRPNLVTVVSVLPSC 351
>gi|15240572|ref|NP_200385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g55740, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
gi|9758608|dbj|BAB09241.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332009292|gb|AED96675.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 830
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 178/690 (25%), Positives = 334/690 (48%), Gaps = 48/690 (6%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNGL 70
+S+ + G +++AL + M R +G +L + G Q+ A +LKNG
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 71 FCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
F A + ++ T L+ Y + L+ +F + +++ +W +I+ + + G E + F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
E++ +E+ V + FG +HG V+K+G + + VA+SL +MY +C
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC 221
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A K+F ++ R+ V+WN ++ ++ +A+ L+ M V P + T +
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
++ A + GK HA I N +E D +G++L++FY K +E A + F + K++V
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV 341
Query: 310 SWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL----HCLI 364
+WN +I GY + + +L++L + + T + ++ ++ + L+L C
Sbjct: 342 TWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYC 401
Query: 365 IRMGYENYEYVLGS--------------------------------LMTSYAKSGLISDA 392
IR +E+ + VL S L+ +YA+SGL +A
Sbjct: 402 IRHSFES-DIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEA 460
Query: 393 LAFVTALN---IPRAVVPANIIAGIYNRTGQYNETVKLLSQLER----PDIVSWNIVIAA 445
L + +P V+ N+I R GQ +E + Q++ P+++SW ++
Sbjct: 461 LRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNG 520
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
NG +E + + M+ + + P+ ++ LSAC+ L +L +G ++HG I + SS
Sbjct: 521 MVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSS 580
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
+ L+DMY KCG I + K+F + A+ISA L G + A+ +R +E
Sbjct: 581 LVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLE 640
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
+G KPD + + VL+AC H G + + +E+F + ++P ++HY +VDLL G
Sbjct: 641 GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGET 700
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
++A ++I MPF P+A + ++ + C + R
Sbjct: 701 EKALRLIEEMPFKPDARMIQSLVASCNKQR 730
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 155/618 (25%), Positives = 286/618 (46%), Gaps = 113/618 (18%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPV-EG 58
+PDRN V++N+++ Y + G E+A+R+F M +G EPT+ T LS + + V EG
Sbjct: 234 IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEG 293
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q A + NG+ D +GT+LL Y + G ++ VF+ M K +VTWN I+S + +
Sbjct: 294 KQSHAIAIVNGMEL-DNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQ 352
Query: 119 HGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G VED +++ C+L+R E + + ++ + ++L+ G+++ I++ F+ +++
Sbjct: 353 QGLVEDAIYM-CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV 411
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+A+++++MY +C I A+K+F +D++ WNT++ A AES G+AL L+ M ++
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN T+ +I S L+N G+ AK D+F+ ++ +
Sbjct: 472 VPPNVITWNLIILSL--LRN---GQVDEAK--------DMFL------------QMQSSG 506
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
+ N++SW ++ G S +I L ++ + G RPN F+ + L S
Sbjct: 507 II------PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVAL--SACAH 558
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L LH +G + Y++ +L S L+S + V +Y
Sbjct: 559 LASLH-----IGRTIHGYIIRNLQ----HSSLVSIETSLVD----------------MYA 593
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G N+ K+ ++ N +I+A A G+ KE + L++ + + PDN T +
Sbjct: 594 KCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITN 653
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+LSAC+ G I +++IF ++ +
Sbjct: 654 VLSACN------------------------------------HAGDINQAIEIFTDIVSK 677
Query: 537 NVIT-----WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ + ++ L G ++AL EM FKPD + +++ +C +
Sbjct: 678 RSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP---FKPDARMIQSLVASCNK----QR 730
Query: 592 GMELFERMNRS-YGVEPE 608
EL + ++R EPE
Sbjct: 731 KTELVDYLSRKLLESEPE 748
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 179/709 (25%), Positives = 321/709 (45%), Gaps = 89/709 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P+R V ++ ++I +Y R ++ F M+ G P ++ +L +C ++ G
Sbjct: 143 IPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIG 202
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V++ + +D FVG AL+ Y G L SVF M + +V+W +++S + +
Sbjct: 203 KMVHGFVIRKSVE-SDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYME 261
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ +F + V S+ ++ G + +++ +
Sbjct: 262 EGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALE---------------- 305
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ E+M + V SWN II ++ AL+++ RM
Sbjct: 306 ---------------TLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPE 350
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T ++ +C GL+ LGK+IH K+ + +V+V +++D Y+KC + + A
Sbjct: 351 DPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEK 410
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL----RSSL 353
F + NKN WN +I Y ++ ++ LL + + G++P+ T++ +L R+ L
Sbjct: 411 VFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGL 470
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR---------- 403
Q +L +++MG + L++ + +SGL +AL + P
Sbjct: 471 KTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLN 530
Query: 404 -----------AVVPA-----------------------------NIIAGIYNRTGQYNE 423
+PA + + +Y + +
Sbjct: 531 LSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDS 590
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
K+ +++ + VSWN ++A +N +E L+LF M + P + TF+ L AC
Sbjct: 591 ANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGD 650
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
+ + G LHG K ++ + + LIDMY KCGSI + +F+ +++V W A
Sbjct: 651 IAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNA 710
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSY 603
+ISA ++G A+ A F +ME LG PD + +++L+AC GLV EG + F M SY
Sbjct: 711 MISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISY 770
Query: 604 GVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
GV ++HY C+V +L G L EA I MP+PP+A +W T L+ C+
Sbjct: 771 GVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACR 819
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 220/485 (45%), Gaps = 68/485 (14%)
Query: 162 QIHGLVIK-NGFDYELLVANSLVNMYFQCAGIWS---AEKMFKDVEIRDVVSWNTIIGAL 217
QIH V+K N ++ + N LV +Y C WS A K+ ++ R V ++ +I +
Sbjct: 101 QIHARVVKLNALKWKSSIGNKLVVLY--CKNQWSLEDARKLLDEIPNRTVPAYAALIRSY 158
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
SE + + + M + + P++ ++ +C+ + +GK +H VI+ ++E DV
Sbjct: 159 CRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDV 218
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL- 336
FVG+AL+ FY+ C +L + F + +++VSW ALI Y + + L+QL
Sbjct: 219 FVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLD 278
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
G +P+ ++S +L++ +A++G I LA
Sbjct: 279 GVKPDLISWS-------------------------------ALLSGFARNGEID--LALE 305
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
T +P + +P + SWN +I+ C NG ++ L
Sbjct: 306 TLEEMPERGL--------------------------QPTVNSWNGIISGCVQNGYLEDAL 339
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
++F M P+ T S+L AC+ L L LG ++H + K I+ + +V +IDM
Sbjct: 340 DMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIV-GNVYVEGSVIDM 398
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y KCGS + K+F + ++N W +I+A G + AL R M+ G+KPD +
Sbjct: 399 YSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITY 458
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+L+ GL + EL M + G++P + ++ ++ + G EA K+ M
Sbjct: 459 NTILSGHARNGLKTQAXELLSEMVQ-MGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQ 517
Query: 637 FPPNA 641
P +
Sbjct: 518 SPSDG 522
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 138/652 (21%), Positives = 271/652 (41%), Gaps = 112/652 (17%)
Query: 50 CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHG-CLDEVVSVFEDMPRKSLVT 108
C +L+ E Q+ A V+K + +G L+ LY ++ L++ + +++P +++
Sbjct: 93 CSTLS--EFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPA 150
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL-EFGEQIHGLV 167
+ +++ + + ++ +F L+ E L + V I + L G+ +HG V
Sbjct: 151 YAALIRSYCRSEQWDE-LFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFV 209
Query: 168 IKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKAL 227
I+ + ++ V N+L++ Y C + S+ +F ++ RDVVSW +I A E +A
Sbjct: 210 IRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAK 269
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
++ M +D V P D+ SAL+ +
Sbjct: 270 HIFHLMQLDGVKP-----------------------------------DLISWSALLSGF 294
Query: 288 AKCDNLEGAHLCFSEISNK----NIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNE 342
A+ ++ A E+ + + SWN +I G ++ + +L PN
Sbjct: 295 ARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNI 354
Query: 343 FTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAK------------- 385
T + +L + + L+L H + + G YV GS++ Y+K
Sbjct: 355 ITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXK 414
Query: 386 ------------------SGLISDALAFVTALN----IPRAVVPANIIAGIYNRTGQYNE 423
G + DAL + ++ P + I++G + R G +
Sbjct: 415 AENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSG-HARNGLKTQ 473
Query: 424 TVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA------------RI 467
+LLS++ +P++VS+N++I+ +G E L++F+ M++ +
Sbjct: 474 AXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSM 533
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P+ T L AC+ L G +HG + + FV + L+DMY KC + S+
Sbjct: 534 RPNPITITGALPACADLNLWCQGKEIHGYTLRNG-FEPNIFVSSALVDMYAKCHDMDSAN 592
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
K+F + RN ++W AL++ N + AL+ F EM G +P + + + AC
Sbjct: 593 KVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIA 652
Query: 588 LVREGMELFERMNRSYGVEPEMDHYH-----CVVDLLVRYGHLKEAEKIITT 634
+R F R Y + ++D ++D+ + G + +A+ + +
Sbjct: 653 AIR-----FGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDS 699
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 117/229 (51%), Gaps = 5/229 (2%)
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
KLL ++ + ++ +I + + + E+ F+ M + PD Y ++L ACS +
Sbjct: 138 KLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAML 197
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
+G +HG + + + SD FV N LI Y CG +GSS +F+ M +R+V++WTALI
Sbjct: 198 LXRIGKMVHGFVIRKSV-ESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALI 256
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
SA G A F M+ G KPD ++ A+L+ G + +E E M G+
Sbjct: 257 SAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPER-GL 315
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTM---PFPPNALIWRTFLEGC 651
+P ++ ++ ++ V+ G+L++A + + M P PN + + L C
Sbjct: 316 QPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPAC 364
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 156/393 (39%), Gaps = 75/393 (19%)
Query: 246 VYVINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCD-NLEGAHLCFSEI 303
+ ++N C+ L + IHA+V+K NAL+ +G+ LV Y K +LE A EI
Sbjct: 87 ISLLNRCSTLSEF---RQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEI 143
Query: 304 SNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHC 362
N+ + ++ ALI Y +F L+ G P+++ +L++ A
Sbjct: 144 PNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAM------- 196
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
L+ R+G + V G FV ++ V N + Y+ G
Sbjct: 197 LLXRIG----KMVHG-----------------FVIRKSVESDVFVGNALIHFYSNCGDLG 235
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
+ + ++ D+VSW +I+A G E +F M+ + PD ++ +LLS
Sbjct: 236 SSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSG-- 293
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR----NV 538
+ + G I +++ EM +R V
Sbjct: 294 ----------------------------------FARNGEIDLALETLEEMPERGLQPTV 319
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
+W +IS NG+ + AL+ F M + P+ + + ++L AC +R G +
Sbjct: 320 NSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLG-KAIHX 378
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ +G+ + V+D+ + G AEK+
Sbjct: 379 IAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKV 411
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 263/537 (48%), Gaps = 49/537 (9%)
Query: 132 LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
+R + + +V ++ +++ + ++IH ++K G + + LVN+Y +C
Sbjct: 60 FIREGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGT 119
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
+ +A K+F ++ R+VVSW T++ A++++ M +P T +++
Sbjct: 120 METARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSA 179
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
+ L + LGK IH IK +E D +G++L Y+KC +LE A F I +KN++SW
Sbjct: 180 SSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISW 239
Query: 312 NALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIR 366
+I + + T + +E+L PNEFT + L Q L Q+H L I+
Sbjct: 240 TTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIK 299
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
+G+E+ + S+M Y K G I +E K
Sbjct: 300 LGFESNLPIKNSIMYLYLKCGWI--------------------------------HEAKK 327
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDY-----------KEVLELFKYMRAARIYPDNYTFV 475
L ++E +V+WN +IA A D+ E L +F + + + PD +TF
Sbjct: 328 LFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFS 387
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+LS CS L L G +H KT +S D V L++MY KCGSI + K F EM+
Sbjct: 388 SVLSVCSSLVALEQGEQVHAQTIKTGFLS-DVVVGTALVNMYNKCGSIERASKAFVEMSI 446
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
R +I+WT++I+ NG Q+AL F +M G +P+++ + VL+AC H G+V E ++
Sbjct: 447 RTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDY 506
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+ M Y + P MDHY C++D+ VR G L EA I M PN IW + GC+
Sbjct: 507 FQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCR 563
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 249/493 (50%), Gaps = 31/493 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVE-G 58
+P RNVVS+ ++++ Y E A+++F M+ G PT +T G LS S L+ E G
Sbjct: 130 LPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELG 189
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K + DA +G +L LY + G L+ V F + K++++W +++S +G
Sbjct: 190 KQIHGYSIKYRIEF-DASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGD 248
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + F E++ V E + + Q L+ G QIH L IK GF+ L +
Sbjct: 249 NGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPI 308
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-----------AL 227
NS++ +Y +C I A+K+F ++E +V+WN +I A +F K AL
Sbjct: 309 KNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEAL 368
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
++L+++ + P+ TF V++ C+ L G+ +HA+ IK DV VG+ALV+ Y
Sbjct: 369 SIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMY 428
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFS 346
KC ++E A F E+S + ++SW ++I GYA P LL E ++L G RPN+ TF
Sbjct: 429 NKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFV 488
Query: 347 HVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-------KSGLISDALAFVTAL 399
VL + ++ +M EY + +M YA + G + +A F+ +
Sbjct: 489 GVLSACSHAGMVDEALDYFQM--MKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEM 546
Query: 400 NI-PRAVVPANIIAGIYNR----TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
++ P + + +IAG ++ G Y + L L+ D ++N+++ G +KE
Sbjct: 547 DLEPNEFIWSILIAGCRSQGKLELGFY--AAEQLLNLKPKDTETYNLLLNMYLSAGKWKE 604
Query: 455 VLELFKYMRAARI 467
V + K M+ ++
Sbjct: 605 VSRVRKMMKEEKL 617
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 249/534 (46%), Gaps = 56/534 (10%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ ++ A ++K G DAF+ T L+ +Y + G ++ VF+++PR+++V+W ++++ +
Sbjct: 87 DAQKIHAHIVKTGAH-KDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGY 145
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
E + +F E++ + T + + S+ E G+QIHG IK +++
Sbjct: 146 VHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDA 205
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ NSL ++Y +C + A K F+ + ++V+SW T+I A ++ L+ ++ M +
Sbjct: 206 SIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSE 265
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN+ T ++ C +Q+ +G IH+ IK E ++ + ++++ Y KC + A
Sbjct: 266 CVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEA 325
Query: 297 HLCFSEISNKNIVSWNALILGYAS------------KSSPTSIFLLIELLQLGYRPNEFT 344
F E+ ++V+WNA+I G+A + ++ + ++L + G +P+ FT
Sbjct: 326 KKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFT 385
Query: 345 FSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
FS VL + L Q+H I K+G +SD
Sbjct: 386 FSSVLSVCSSLVALEQGEQVHAQTI-------------------KTGFLSD--------- 417
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
VV + +YN+ G K ++ ++SW +I A NG ++ L LF+
Sbjct: 418 ----VVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFE 473
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYG 518
MR A + P+ TFV +LSACS + ++K I+ D + C LIDM+
Sbjct: 474 DMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYAC--LIDMFV 531
Query: 519 KCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
+ G + + EM + N W+ LI+ G + L + + L KP
Sbjct: 532 RLGRLDEAFDFIKEMDLEPNEFIWSILIA--GCRSQGKLELGFYAAEQLLNLKP 583
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 135/286 (47%), Gaps = 12/286 (4%)
Query: 388 LISDAL---AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
L+SDA A + + + +Y + G K+ +L R ++VSW ++
Sbjct: 84 LVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMT 143
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
H+ + +++F+ M A YP NYT + LSA S L + LG +HG K I
Sbjct: 144 GYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRI-E 202
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
D + N L +Y KCGS+ +VK F + D+NVI+WT +ISA G NG A L+ F EM
Sbjct: 203 FDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEM 262
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR---SYGVEPEMDHYHCVVDLLVR 621
+P+ L + L+ C V + +++ +++ G E + + ++ L ++
Sbjct: 263 LSECVEPNEFTLTSALSLC----CVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLK 318
Query: 622 YGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYDTLNSTKC 667
G + EA+K+ M + + W + G R D L + +C
Sbjct: 319 CGWIHEAKKLFDEME-TISLVTWNAMIAGHARMMDFAKDDLAAHQC 363
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 181/574 (31%), Positives = 276/574 (48%), Gaps = 43/574 (7%)
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI 148
G L VF+ +P +N+++ + G + L+ ++R VA + +F V+
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
S DL G IH G +L V+ +L+++Y +CA A +F + +RDVV
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
+WN ++ A + A+ L M + PN +T V ++ A G SIHA
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 268 VIKNALECD---VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
++ LE + V +G+AL+D YAKC L A F + +N V+W+ALI G+
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 325 TSIF-LLIELLQLGY-RPNEFTFSHVLR--SSLA--FQLLQLHCLIIRMGYENYEYVLGS 378
T F L ++L G + + + LR +SLA QLH LI + G S
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
L++ YAK+GLI NE ++ D +S
Sbjct: 348 LLSMYAKAGLI--------------------------------NEATMFFDEIAVKDTIS 375
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
+ +++ C NG +E +FK M+A + PD T VSL+ ACS L L G HG +
Sbjct: 376 YGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVI 435
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
++ +T +CN LIDMY KCG I S ++F++M R+V++W +I+ G++G + A
Sbjct: 436 -IRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEAT 494
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDL 618
F M+ GF PD V I ++ AC H GLV EG F+ M YG+ P M+HY C+VDL
Sbjct: 495 TLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDL 554
Query: 619 LVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L R G L EA + I +MP + +W L C+
Sbjct: 555 LARGGLLDEAYQFIQSMPLKADVRVWGALLGACR 588
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 129/563 (22%), Positives = 254/563 (45%), Gaps = 52/563 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P + ++N++I AYS G A+ ++ M+ P ++TF +L +C +L + G
Sbjct: 60 IPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAG 119
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A GL D FV TAL+ LY R +VF MP + +V WN++++ +
Sbjct: 120 RTIHAHAAAAGLH-TDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYAN 178
Query: 119 HGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY--- 174
HG + ++ + S+ V ++ L+ L G IH ++ +
Sbjct: 179 HGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEE 238
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++L+ +L++MY +C + A ++F + +R+ V+W+ +IG + +A L+ M
Sbjct: 239 QVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDML 298
Query: 235 VD-IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
V+ + F + T+ + CA L + +G +HA + K+ + D+ ++L+ YAK +
Sbjct: 299 VEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLI 358
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSS 352
A + F EI+ K+ +S+ AL+ G FL+ + +Q P+ T ++ +
Sbjct: 359 NEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPAC 418
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
LQ G S + L + ++ N +
Sbjct: 419 SHLAALQ--------------------------HGKCSHGSVIIRGLALETSIC--NSLI 450
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G+ + + ++ ++ D+VSWN +IA +G KE LF M+ PD+
Sbjct: 451 DMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDV 510
Query: 473 TFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
TF+ L++ACS + G + +G++ + E ++C ++D+ + G +
Sbjct: 511 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRME-----HYIC--MVDLLARGGLLDE 563
Query: 526 SVKIFNEMTDR-NVITWTALISA 547
+ + M + +V W AL+ A
Sbjct: 564 AYQFIQSMPLKADVRVWGALLGA 586
>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 160/536 (29%), Positives = 267/536 (49%), Gaps = 49/536 (9%)
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
++ E + S ++ ++ + + + + IH +IK G +L V SLVN+Y +C +
Sbjct: 66 IKEEKKIEPSYYLPLLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAM 125
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
+A K+F + R+VV+W ++ ++ A++++ M P+ T +N+C
Sbjct: 126 GNARKIFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNAC 185
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
+ + + LGK +HA VIK L+ D +G+AL Y+K +L+ + F I KN++SW
Sbjct: 186 SAINSIKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWT 245
Query: 313 ALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLR---SSLAFQLLQL-HCLIIRM 367
A+I + + E+L +PNEFT + VL +LA L +L H L I++
Sbjct: 246 AVISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKL 305
Query: 368 GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
GY+ + S+M Y K G + +A ++++ G N
Sbjct: 306 GYQYNLRITNSIMYLYLKCGHMDEAQI-------------------LFHKMGSTN----- 341
Query: 428 LSQLERPDIVSWNIVIAACAHNGDYK-----------EVLELFKYMRAARIYPDNYTFVS 476
+V+WN +I+ A D E L +F + PD +T S
Sbjct: 342 --------LVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLELNRTGKKPDLFTLSS 393
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+L+ CS+L L G LH K+ +S D V L++MY KCGSIG + K F EM+ R
Sbjct: 394 VLTVCSRLSALGQGEQLHAQTIKSGYLS-DVVVGTALVNMYSKCGSIGKASKAFVEMSTR 452
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+I+WT +I+ L +G +++AL+ F +M G +P+++ + VL AC H G+V E + F
Sbjct: 453 TLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHSGMVDEALGYF 512
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
E M + Y ++P MDHY C++ + V+ L EA II M F P+ IW + GC+
Sbjct: 513 EMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDIINKMDFEPSEFIWSILIAGCR 568
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 239/496 (48%), Gaps = 54/496 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-GAQL 61
RNVV++ ++++ Y + A+ +F M+ G P+ +T G L +C ++N ++ G QL
Sbjct: 138 RNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQL 197
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A V+K L D +G AL LY + G LD ++VF+ + K++++W +++S G++G
Sbjct: 198 HAFVIKYKL-DYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGK 256
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ F E++ ++ E + V+ L G +H L IK G+ Y L + NS
Sbjct: 257 AAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNS 316
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-----------ALELY 230
++ +Y +C + A+ +F + ++V+WN +I A++ + K AL ++
Sbjct: 317 IMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIF 376
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
L ++ P+ T V+ C+ L G+ +HA+ IK+ DV VG+ALV+ Y+KC
Sbjct: 377 LELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKC 436
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVL 349
++ A F E+S + ++SW +I G A L E ++L G RPN+ TF VL
Sbjct: 437 GSIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVL 496
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA- 408
+ C SG++ +AL + + + P
Sbjct: 497 AA----------C---------------------CHSGMVDEALGYFEMMQKEYRIKPVM 525
Query: 409 ---NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+ ++ + + +E ++++++ P W+I+IA C + G K+ L + +
Sbjct: 526 DHYGCLIAMFVKLRRLDEAFDIINKMDFEPSEFIWSILIAGCRNLG--KQELGFYAAEQL 583
Query: 465 ARI-YPDNYTFVSLLS 479
++ D T+V+LL+
Sbjct: 584 LKLKLKDTETYVTLLN 599
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/558 (24%), Positives = 264/558 (47%), Gaps = 62/558 (11%)
Query: 35 RGFEPTQFTFGGLLSCDSLNPVEGAQ-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDE 93
+ EP+ + L C N V AQ + A ++K G D V T+L+ +Y + G +
Sbjct: 70 KKIEPSYY-LPLLQECTKKNSVSEAQVIHAHIIKTGTH-KDLAVMTSLVNVYAKCGAMGN 127
Query: 94 VVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
+F+ + R+++V W ++++ + ++ + +F +++ S + + ++ S
Sbjct: 128 ARKIFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSA 187
Query: 154 EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTI 213
++ G+Q+H VIK DY+ + N+L ++Y + + S+ +F+ + ++V+SW +
Sbjct: 188 INSIKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAV 247
Query: 214 IGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
I A E+ L + M ++ + PN+ T V++ C +LG+ +H+ IK
Sbjct: 248 ISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGY 307
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY------------ASK 321
+ ++ + ++++ Y KC +++ A + F ++ + N+V+WNA+I G+ A +
Sbjct: 308 QYNLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQR 367
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLG 377
S ++ + +EL + G +P+ FT S VL R S Q QLH I+ GY
Sbjct: 368 SGIEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGY-------- 419
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
+SD VV + +Y++ G + K ++ ++
Sbjct: 420 -----------LSD-------------VVVGTALVNMYSKCGSIGKASKAFVEMSTRTLI 455
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC--SKLCNLALGSSLHG 495
SW +I A +G ++ L+LF+ MR A + P+ TFV +L+AC S + + ALG
Sbjct: 456 SWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHSGMVDEALG--YFE 513
Query: 496 LIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG 552
+++K I D + C LI M+ K + + I N+M + + W+ LI+ G
Sbjct: 514 MMQKEYRIKPVMDHYGC--LIAMFVKLRRLDEAFDIINKMDFEPSEFIWSILIA--GCRN 569
Query: 553 FAQRALEKFREMEFLGFK 570
++ L + + L K
Sbjct: 570 LGKQELGFYAAEQLLKLK 587
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 142/274 (51%), Gaps = 16/274 (5%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQ 60
++NV+S+ ++ISA G LR F M+ +P +FT +LS C +L V G
Sbjct: 238 EKNVISWTAVISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRL 297
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS------ 114
+ + +K G + + + +++ LY + G +DE +F M +LVTWN+++S
Sbjct: 298 VHSLSIKLG-YQYNLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAM 356
Query: 115 IFGKHGFVE-----DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
K F + + +F EL R+ + V+ S L GEQ+H IK
Sbjct: 357 DLAKDDFSAQRSGIEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIK 416
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
+G+ +++V +LVNMY +C I A K F ++ R ++SW T+I LA+ + +AL+L
Sbjct: 417 SGYLSDVVVGTALVNMYSKCGSIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQL 476
Query: 230 YLRMSVDIVFPNQTTFVYVINSC--AGLQNSILG 261
+ M + V PNQ TFV V+ +C +G+ + LG
Sbjct: 477 FEDMRLAGVRPNQITFVGVLAACCHSGMVDEALG 510
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 161/573 (28%), Positives = 274/573 (47%), Gaps = 41/573 (7%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
+ G L+ +F+ M ++ ++W +I+S + + + LF ++ E L F+
Sbjct: 13 KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMW-VEPGLHMDPFIL 71
Query: 147 --VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
+ + FGE +HG +K F + V ++LV+MY + + +FK++ +
Sbjct: 72 SLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPL 131
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
R+VVSW II L + +AL + M + V + TF + +CA G+ I
Sbjct: 132 RNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREI 191
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSS 323
H + +K FV + L Y KC L+ F ++ +++VSW +I+
Sbjct: 192 HCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQE 251
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSL 379
++ + + PNEFTF+ V+ + QLH +IR G
Sbjct: 252 ENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRG----------- 300
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
V +L++ AN I +Y++ Q + + L R DI+SW
Sbjct: 301 ---------------LVDSLSV------ANSIMAMYSKCWQLDLASTVFQGLSRRDIISW 339
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+ +I+ A G +E + +MR P+ + F S+LS C + L G LH +
Sbjct: 340 STMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLC 399
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+ +T V + LI+MY KCGSI + KIF+E N+++WTA+I+ +G++Q A++
Sbjct: 400 VGL-EQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAID 458
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
F+++ +G +PD V IAVL AC H GLV G F +++ + + P DHY C++DLL
Sbjct: 459 LFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLL 518
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G L +AE +I +MPF + ++W T L C+
Sbjct: 519 CRAGRLNDAESMIQSMPFQRDDVVWSTLLRACR 551
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 173/623 (27%), Positives = 293/623 (47%), Gaps = 56/623 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLLSCDSLNPVE-- 57
M R+ +S+ +IIS Y +AL +F M + G F L LN
Sbjct: 27 MLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLALKACGLNMSVSF 86
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G L +K F FVG+AL+ +Y + G +DE VF++MP +++V+W +I++
Sbjct: 87 GESLHGYSVKTD-FVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLV 145
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G+ ++ + F ++ +V +F + ++ L +G +IH +K GF
Sbjct: 146 RAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSF 205
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VAN+L MY +C + ++F+ + RDVVSW TII + + A++ + RM
Sbjct: 206 VANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETD 265
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN+ TF VI+ CA L G+ +HA VI+ L + V ++++ Y+KC L+ A
Sbjct: 266 VSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLAS 325
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVL----RSS 352
F +S ++I+SW+ +I GYA F + ++ G RPNEF F+ VL +
Sbjct: 326 TVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMA 385
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ Q QLH ++ +G E V +L+ Y+K G I +A
Sbjct: 386 ILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEA-------------------- 425
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K+ + E +IVSW +I A +G +E ++LFK + + PD+
Sbjct: 426 ------------SKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSV 473
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF+++L+ACS + LG + K I S D + C +ID+ + G + + +
Sbjct: 474 TFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGC--MIDLLCRAGRLNDAESMI 531
Query: 531 NEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFKPD-RVALIAVLTACRH 585
M R+ + W+ L+ A ++G +RA EK +++ P+ V I +
Sbjct: 532 QSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLD-----PNCAVTHITLANMYAA 586
Query: 586 GGLVREGMELFERMNRSYGVEPE 608
G +E E+ +M +S GV E
Sbjct: 587 KGKWKEAAEV-RKMMKSKGVVKE 608
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 181/622 (29%), Positives = 297/622 (47%), Gaps = 53/622 (8%)
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTA--LLGLYGRHGCLDEVVSVFEDMPRKSLVTWNS 111
N V G + +++ G A + A L+ Y + G L + S+F + K +V+WNS
Sbjct: 29 NLVAGRAVHGQIIRTG---ASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNS 85
Query: 112 IVSIFGKHGFVEDC---MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
+++ + ++G + M LF E+ ++ + G+ S+ Q G Q H LV+
Sbjct: 86 LITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVV 145
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES---ENFGK 225
K ++ V SLV MY + + K+F + R+ +W+T++ A E K
Sbjct: 146 KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIK 205
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
L+LR + + F V++S A LG+ IH IKN L V + +ALV
Sbjct: 206 VFNLFLREKEEGS-DSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVT 264
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFT 344
Y+KC++L A F ++N ++W+A++ GY+ S ++ L + G +P+E+T
Sbjct: 265 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYT 324
Query: 345 FSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
VL + L QLH ++++G+E + + +L+ YAK+G ++DA
Sbjct: 325 IVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA-------- 376
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
R G L+ D+ W +I+ N D +E L L++
Sbjct: 377 ----------------RKG--------FDCLQERDVALWTSLISGYVQNSDNEEALILYR 412
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M+ A I P++ T S+L ACS L L LG +HG K + + + L MY KC
Sbjct: 413 RMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK-HGFGLEVPIGSALSTMYSKC 471
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
GS+ +F +++V++W A+IS L NG ALE F EM G +PD V + ++
Sbjct: 472 GSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNII 531
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
+AC H G V G F M+ G++P++DHY C+VDLL R G LKEA++ I +
Sbjct: 532 SACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHG 591
Query: 641 ALIWRTFLEGCQ---RCRIAKY 659
+WR L C+ +C + Y
Sbjct: 592 LCLWRILLSACKNHGKCELGVY 613
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 178/629 (28%), Positives = 309/629 (49%), Gaps = 68/629 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDA---LRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEG 58
++VVS+NS+I+ YS+ G + + +++F M + P +T G+ +S + G
Sbjct: 78 KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVG 137
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q A V+K F D +V T+L+G+Y + G +++ + VF MP ++ TW+++VS +
Sbjct: 138 RQAHALVVKMSSF-GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFV--GVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G VE+ + +F +R + ++S +V V+ L+ + G QIH + IKNG +
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++N+LV MY +C + A KMF R+ ++W+ ++ +++ +A++L+ RM
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ P++ T V V+N+C+ + GK +H+ ++K E +F +ALVD YAK L A
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLR--SSL 353
F + +++ W +LI GY S +L ++ G PN+ T + VL+ SSL
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 436
Query: 354 AFQLL--QLHCLIIRMGYENYEYVLGS-LMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
A L Q+H I+ G+ E +GS L T Y+K G + D N+
Sbjct: 437 ATLELGKQVHGHTIKHGF-GLEVPIGSALSTMYSKCGSLEDG-------NL--------- 479
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
++ RT D+VSWN +I+ +HNG E LELF+ M A + PD
Sbjct: 480 ---VFRRT-------------PNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPD 523
Query: 471 NYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ TFV+++SACS + G S GL K D + C ++D+ + G +
Sbjct: 524 DVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKV-----DHYAC--MVDLLSRAGQL 576
Query: 524 GSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR--VALIAVL 580
+ + D + W L+SA +G + + ++ LG + V L +
Sbjct: 577 KEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIY 636
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEM 609
TA G +R+ +++ M R+ GV E+
Sbjct: 637 TAL---GRMRDVERVWKHM-RANGVSKEV 661
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 131/519 (25%), Positives = 258/519 (49%), Gaps = 26/519 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE--PTQFTFGGLLS--CDSLNPV 56
MP+RN ++++++S Y+ G VE+A+++F + E + + F +LS ++
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 57 EGAQLQASVLKNGLFCADAFVG--TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
G Q+ +KNGL FV AL+ +Y + L+E +F+ ++ +TW+++V+
Sbjct: 239 LGRQIHCITIKNGLL---GFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVT 295
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ ++G + + LF + + + +E + VGV++ S+ LE G+Q+H ++K GF+
Sbjct: 296 GYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFER 355
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
L +LV+MY + + A K F ++ RDV W ++I ++ + +AL LY RM
Sbjct: 356 HLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 415
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ PN T V+ +C+ L LGK +H IK+ +V +GSAL Y+KC +LE
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLE 475
Query: 295 GAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
+L F NK++VSWNA+I G + + ++ L E+L G P++ TF +++ +
Sbjct: 476 DGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACS 535
Query: 354 AFQLLQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
++ + + ++G + ++ +++G + +A F+ + NI +
Sbjct: 536 HKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLW 595
Query: 409 NIIAGIYNRTGQ------YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
I+ G+ E + L E V + + A G ++V ++K+M
Sbjct: 596 RILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTAL---GRMRDVERVWKHM 652
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
RA + + S + ++ +G ++H +I++T+
Sbjct: 653 RANGVSKE--VGCSWIELKNQYHVFVVGDTMHPMIEETK 689
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 216/466 (46%), Gaps = 56/466 (12%)
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
S +++L G +HG +I+ G + AN LVN Y +C + A +F + +DVVSWN
Sbjct: 25 SQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWN 84
Query: 212 TIIGALAESENFGKA---LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
++I +++ + ++L+ M + PN T + + + LQ+S +G+ HA V
Sbjct: 85 SLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALV 144
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK---SSPT 325
+K + D++V ++LV Y K +E F+ + +N +W+ ++ GYA++
Sbjct: 145 VKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAI 204
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-----QLHCLIIRMGYENYEYVLGSLM 380
+F L + +++ F+ VL SSLA + Q+HC+ I+ G
Sbjct: 205 KVFNLFLREKEEGSDSDYVFTAVL-SSLAATIYVGLGRQIHCITIKNGL----------- 252
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
L FV +N + +Y++ NE K+ + ++W+
Sbjct: 253 ------------LGFVAL---------SNALVTMYSKCESLNEACKMFDSSGDRNSITWS 291
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
++ + NG+ E ++LF M +A I P YT V +L+ACS +C L G LH + K
Sbjct: 292 AMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL 351
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
F L+DMY K G + + K F+ + +R+V WT+LIS N + AL
Sbjct: 352 G-FERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALIL 410
Query: 561 FREMEFLGFKPDRVALIAVLTACR-----------HGGLVREGMEL 595
+R M+ G P+ + +VL AC HG ++ G L
Sbjct: 411 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGL 456
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 197/423 (46%), Gaps = 49/423 (11%)
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ +T + + + +N + G+++H ++I+ + + LV+FYAKC L AH
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 300 FSEISNKNIVSWNALILGYAS----KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F+ I K++VSWN+LI GY+ SS T + L E+ PN +T + + ++ +
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 356 QL----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
Q Q H L+++M YV SL+ Y K+GL+ D L
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGL------------------ 173
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK-YMRAARIYPD 470
K+ + + + +W+ +++ A G +E +++F ++R D
Sbjct: 174 --------------KVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD 219
Query: 471 -NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC--NMLIDMYGKCGSIGSSV 527
+Y F ++LS+ + + LG +H + K ++ FV N L+ MY KC S+ +
Sbjct: 220 SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLG---FVALSNALVTMYSKCESLNEAC 276
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
K+F+ DRN ITW+A+++ NG + A++ F M G KP ++ VL AC
Sbjct: 277 KMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDIC 336
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
+ EG +L + + G E + +VD+ + G L +A K + AL W +
Sbjct: 337 YLEEGKQLHSFLLK-LGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVAL-WTSL 394
Query: 648 LEG 650
+ G
Sbjct: 395 ISG 397
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 170/577 (29%), Positives = 289/577 (50%), Gaps = 70/577 (12%)
Query: 142 SSFVGVIHGLSNEQDLEF-------------GEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
S + +IH N L+F +QIH +I G +A +V++Y
Sbjct: 857 SRSISIIHHQPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAG 916
Query: 189 CAGIWSAEKMFKDVEIR---DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
+ A+++F+ I +++ WN+I+ A +ALE+Y RM V + TF
Sbjct: 917 FGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTF 976
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
VI +CA + + L +S+H V++ + ++ VG+ L+ Y K ++ A F ++
Sbjct: 977 PLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAV 1036
Query: 306 KNIVSWNALILGYASK---SSPTSIFLLIELLQLGYRPNEFTFSHVLRS----------- 351
++ VSWN ++ GYA + +F ++ G PN T++ +L S
Sbjct: 1037 RSCVSWNTMVSGYALNYDCHGASEMFRMMG--SAGLEPNLVTWTSLLSSHARCGQHVETM 1094
Query: 352 ----------------------SLAFQLLQ------LHCLIIRMGYENYEYVLGSLMTSY 383
S++ L +H +++ G+ENY +V SL+ Y
Sbjct: 1095 ELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLY 1154
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE--------RPD 435
K G ++ A + + +V N + Y G +E + QLE RP+
Sbjct: 1155 GKHGNVNAARILFLEIKT-KNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPN 1213
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
+VSW+ VI A G +E LELF+ M+ A++ ++ T S+LS C++L L LG +HG
Sbjct: 1214 VVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHG 1273
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
+ ++ ++ + V N LI+MY K GS +F ++ ++++I+W +++ G++G +
Sbjct: 1274 HVVRS-LMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGE 1332
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
A+ F +M GF+PD V +AVL+AC H GLV EG ELF++M + + VEP+M+HY C+
Sbjct: 1333 NAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACM 1392
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
VDLL R G L+EA K++ +MP PNA +W L C+
Sbjct: 1393 VDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCR 1429
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 137/528 (25%), Positives = 241/528 (45%), Gaps = 59/528 (11%)
Query: 75 AFVGTALLGLYGRHGCLDEVVSVFEDMPRK---SLVTWNSIVSIFGKHGFVEDCMFLFCE 131
AF+ ++ +Y G + + VFE P + +L+ WNSI+ HG+ E+ + ++C
Sbjct: 904 AFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCR 963
Query: 132 LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
+ + V+ +F VI + + +HG V++ GF + L V N L+ MY +
Sbjct: 964 MRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGR 1023
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
+ A K+F+ + +R VSWNT++ A + + A E++ M + PN T+ +++S
Sbjct: 1024 MDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSS 1083
Query: 252 CA--------------------GLQNSIL---------------GKSIHAKVIKNALECD 276
A G L GK IH V+K E
Sbjct: 1084 HARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENY 1143
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK---SSPTSIFLLIEL 333
+FV ++L+ Y K N+ A + F EI KNIVSWNALI YA +IFL +E
Sbjct: 1144 LFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEK 1203
Query: 334 LQ--LGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
RPN ++S V+ + L+L + + + S+++ A+
Sbjct: 1204 TDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAE-- 1261
Query: 388 LISDALAFVTALNIPRAVVPANIIAG-----IYNRTGQYNETVKLLSQLERPDIVSWNIV 442
L + L ++ R+++ NI+ G +Y ++G + E + ++E D++SWN +
Sbjct: 1262 LAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTM 1321
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL-HGLIKKTE 501
+A +G + + F M PD TFV++LSACS +A G L +IK+
Sbjct: 1322 VAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFR 1381
Query: 502 IISS-DTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISA 547
+ + + C ++D+ G+ G + + K+ M + N W AL+++
Sbjct: 1382 VEPQMEHYAC--MVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNS 1427
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 214/492 (43%), Gaps = 98/492 (19%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEG--AQLQ 62
N++ +NSI+ A GY E+AL ++ M G FTF ++ +L +
Sbjct: 937 NLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVH 996
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK---- 118
V++ G F + VG L+G+YG+ G +D+ VFE M +S V+WN++VS +
Sbjct: 997 GHVVEMG-FQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDC 1055
Query: 119 HGFVE-------------------------------DCMFLFCELVRSEVALTESSFVGV 147
HG E + M LF + + T + V
Sbjct: 1056 HGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVV 1115
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
+ + + G+ IHG V+K GF+ L V NSL+ +Y + + +A +F +++ +++
Sbjct: 1116 LSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNI 1175
Query: 208 VSWN---------------------------------------TIIGALAESENFGKALE 228
VSWN +IG A +ALE
Sbjct: 1176 VSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALE 1235
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
L+ RM + V N T V++ CA L LG+ IH V+++ ++ ++ VG+ L++ Y
Sbjct: 1236 LFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYT 1295
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSH 347
K + + +L F +I NK+++SWN ++ GY +I ++++ G+ P+ TF
Sbjct: 1296 KSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVA 1355
Query: 348 VLRSSLAFQLLQLHCLIIRMGYENY-----EYVLGSLMTSYA-------KSGLISDALAF 395
VL + H ++ G E + E+ + M YA ++GL+ +A
Sbjct: 1356 VLSAC-------SHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKV 1408
Query: 396 VTALNI-PRAVV 406
V ++ + P A V
Sbjct: 1409 VKSMPVEPNACV 1420
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 164/354 (46%), Gaps = 44/354 (12%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQ 62
N+V++ S++S+++RCG + + +F M RG T +LS D EG +
Sbjct: 1073 NLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIH 1132
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
V+K G F FV +L+ LYG+HG ++ +F ++ K++V+WN+++S + G+
Sbjct: 1133 GYVVKGG-FENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWC 1191
Query: 123 EDCMFLFCELVRSE----VALTESSFVGVIHGLSN----EQDLEF--------------- 159
++ +F +L +++ V S+ VI G ++ E+ LE
Sbjct: 1192 DEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVT 1251
Query: 160 ----------------GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
G +IHG V+++ D +LV N L+NMY + +F+ +E
Sbjct: 1252 IASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIE 1311
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
+D++SWNT++ A+ + +M D P+ TFV V+++C+ G+
Sbjct: 1312 NKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRE 1371
Query: 264 IHAKVIKN-ALECDVFVGSALVDFYAKCDNL-EGAHLCFSEISNKNIVSWNALI 315
+ K+IK +E + + +VD + L E + + S N W AL+
Sbjct: 1372 LFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALL 1425
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 171/388 (44%), Gaps = 20/388 (5%)
Query: 231 LRMSVDIVF--PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
L S+ I+ PN + + S L + IH+++I F+ + +V YA
Sbjct: 856 LSRSISIIHHQPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYA 915
Query: 289 KCDNLEGAHLCFSEISN----KNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEF 343
+ A F E+S N++ WN+++ A ++ + + +LG + F
Sbjct: 916 GFGLVSDAQRVF-EVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGF 974
Query: 344 TFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
TF V+R+ +L H ++ MG++ +V LM Y K G + DA +
Sbjct: 975 TFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERM 1034
Query: 400 NIPRAVVPANIIAGI---YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
+ V +++G Y+ G + S P++V+W ++++ A G + E +
Sbjct: 1035 AVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETM 1094
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
ELF MR I +LS L G +HG + K + FV N LI +
Sbjct: 1095 ELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGG-FENYLFVKNSLICL 1153
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM----EFLGFKPD 572
YGK G++ ++ +F E+ +N+++W ALIS+ G+ A F ++ E+ +P+
Sbjct: 1154 YGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPN 1213
Query: 573 RVALIAVLTACRHGGLVREGMELFERMN 600
V+ AV+ G E +ELF RM
Sbjct: 1214 VVSWSAVIGGFASKGQGEEALELFRRMQ 1241
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGAQ 60
+++++S+N++++ Y G E+A+R F MI GFEP TF +LS C V EG +
Sbjct: 1312 NKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRE 1371
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP 102
L ++K ++ L GR G L E V + MP
Sbjct: 1372 LFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMP 1413
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 164/497 (32%), Positives = 252/497 (50%), Gaps = 38/497 (7%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCA---GIWSAEKM-FKDVEIRDVVSWNTIIGA 216
+ IH +++ D + N L+N+ CA G + K+ F V+ ++ WNT+I
Sbjct: 33 KHIHARLLRLHLDQD----NYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRG 88
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
L + F A+ LY M PN T +V+ +CA + LG IH+ ++K + D
Sbjct: 89 LVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHD 148
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQ 335
VFV ++L+ Y KCDN + A F +I +KN+VSW A+I GY S +I +LL+
Sbjct: 149 VFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLE 208
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
+G +P+ F+ VL + R+G + G + Y ISD+
Sbjct: 209 MGLKPDSFSLVKVLAAC------------ARLG----DCTSGEWIDRY-----ISDS--- 244
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
+ R V A + +Y + G + S + DIVSW+ +I A NG ++
Sbjct: 245 ----GMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQA 300
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
L+LF M++ + PD YT V +LSAC+ L L LG L+ + E +S + + LID
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLS-NPVLGTALID 359
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY KCGS+ + +IF M ++ + W A++ L +NG A+ F +E G +PD
Sbjct: 360 MYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENT 419
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
I +L C HGG V EG + F M R + + P ++HY C+VDLL R G L EA ++I M
Sbjct: 420 FIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNM 479
Query: 636 PFPPNALIWRTFLEGCQ 652
P PNA++W L GC+
Sbjct: 480 PMKPNAVVWGALLGGCK 496
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 228/490 (46%), Gaps = 52/490 (10%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQ 62
N+ +N++I +DA+ ++ M GF P FT +L L+ G ++
Sbjct: 78 NIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIH 137
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+ ++K G + D FV T+LL LY + D+ + VF+D+P K++V+W +I++ + G
Sbjct: 138 SLLVKAG-YDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHF 196
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ + F +L+ + S V V+ + D GE I + +G + VA SL
Sbjct: 197 REAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSL 256
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
++MY +C + A +F + +D+VSW+T+I A + +AL+L+ +M + + P+
Sbjct: 257 LDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDC 316
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T V V+++CA L LG + + +N + +G+AL+D Y+KC ++ A F+
Sbjct: 317 YTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTA 376
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLH 361
+ K+ V WNA+++G + ++F L L++ G RP+E TF
Sbjct: 377 MKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFI--------------- 421
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNR 417
L+ G +++ F + ++ P+ + + R
Sbjct: 422 ----------------GLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGR 465
Query: 418 TGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD-------YKEVLEL-----FKYMRA 464
G NE +L++ + +P+ V W ++ C + D K+++EL Y++
Sbjct: 466 AGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQL 525
Query: 465 ARIYPDNYTF 474
+ IY N+ +
Sbjct: 526 SNIYSGNHRW 535
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 152/322 (47%), Gaps = 7/322 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+PD+NVVS+ +II+ Y G+ +A+ F ++ G +P F+ +L +C L
Sbjct: 175 IPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG 234
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + + + FV T+LL +Y + G L+ +F MP K +V+W++++ + +
Sbjct: 235 EWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFN 294
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + + LF ++ + + VGV+ + L+ G L+ +N F ++
Sbjct: 295 GLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG 354
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+L++MY +C + A ++F ++ +D V WN ++ L+ + + L+ + +
Sbjct: 355 TALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIR 414
Query: 240 PNQTTFVYVINSC--AGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEGA 296
P++ TF+ ++ C G N G+ + + +L + +VD + L A
Sbjct: 415 PDENTFIGLLCGCTHGGFVNE--GRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEA 472
Query: 297 HLCFSEISNK-NIVSWNALILG 317
H + + K N V W AL+ G
Sbjct: 473 HQLINNMPMKPNAVVWGALLGG 494
>gi|347954470|gb|AEP33735.1| chlororespiratory reduction 21, partial [Olimarabidopsis pumila]
Length = 811
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 180/688 (26%), Positives = 333/688 (48%), Gaps = 48/688 (6%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNGL 70
+S+ + G +++AL + M R +G L + G Q+ A +LKNG
Sbjct: 22 VSSLCKNGEIKEALSLVTEMDFRNXRIGPEIYGEXLQGCVYERDLSTGKQIHARILKNGD 81
Query: 71 FCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
F A + ++ T L+ Y + L+ +F + +++ +W +I+ + + G E + F
Sbjct: 82 FYARNEYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 141
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
E++ +E+ V Q FG +HG VIK G + + VA+SL +MY +C
Sbjct: 142 VEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAGLEDCVFVASSLADMYGKC 201
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A K+F ++ R+VV+WN ++ ++ +A+ L+ M + V P + T +
Sbjct: 202 GVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCL 261
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
++ A + GK HA I N LE D +G++L++FY K +E A + F + +K++V
Sbjct: 262 SASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMFDKDVV 321
Query: 310 SWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL----QLHCLI 364
+WN LI GY + + +L++L + + T S ++ ++ + L ++ C
Sbjct: 322 TWNLLISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLSTLMSAAARTENLKFGKEVQCYC 381
Query: 365 IRMGYENYEYVLGS--------------------------------LMTSYAKSGLISDA 392
IR + + VL S L+ +YA+SGL +A
Sbjct: 382 IRHSLDT-DIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAQSGLSGEA 440
Query: 393 LAFVTAL---NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER----PDIVSWNIVIAA 445
L + ++P V+ N+I R G+ NE ++ Q++ P+++SW ++
Sbjct: 441 LRLFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKEMFLQMQSSGISPNLISWTTMMNG 500
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
NG +E + + M+ + + P+ ++ LSA + L +L G S+HG I + SS
Sbjct: 501 MVQNGCSEEAILFLRKMQESGLRPNAFSITVALSASANLASLHFGRSIHGYIIRNLRHSS 560
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
+ L+DMY KCG I + ++F + + A+ISA L G + A+ +R +E
Sbjct: 561 SVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAIALYRSLE 620
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
+G KPD V ++L+AC H G + + + +F M +G+ P ++HY +VDLL G
Sbjct: 621 DMGIKPDSVTFTSLLSACNHAGDIDQAVGVFTAMVLKHGMTPCLEHYGLMVDLLASAGET 680
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQR 653
++A ++I MP+ P+A + ++ + C +
Sbjct: 681 EKAIRLIEEMPYKPDARMIQSLVASCNK 708
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 160/619 (25%), Positives = 289/619 (46%), Gaps = 115/619 (18%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV---E 57
+P+RNVV++N+++ Y + G E+A+R+F M G EPT+ T LS S N V E
Sbjct: 214 IPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSA-SANMVGVEE 272
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q A + NGL D +GT+LL Y + G ++ VF+ M K +VTWN ++S +
Sbjct: 273 GKQSHAIAIVNGLEL-DNILGTSLLNFYCKVGLIEYAEMVFDRMFDKDVVTWNLLISGYV 331
Query: 118 KHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ G VED +++ +L+R E + + ++ + ++L+FG+++ I++ D ++
Sbjct: 332 QQGLVEDAIYM-SQLMRLEKLKYDCVTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDI 390
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++A++ ++MY +C I A+K+F +D++ WNT++ A A+S G+AL L+ M ++
Sbjct: 391 VLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLE 450
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN T+ +I S L+N G+ AK ++F+
Sbjct: 451 SVPPNVITWNLIILSL--LRN---GEVNEAK--------EMFL----------------- 480
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
+ S IS N++SW ++ G S +I L ++ + G RPN F+ + L +S
Sbjct: 481 QMQSSGIS-PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSASA-- 537
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L LH G + Y++ +L S ++++I ++V +Y
Sbjct: 538 NLASLH-----FGRSIHGYIIRNLRHS--------------SSVSIETSLVD------MY 572
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G N+ ++ ++ +N +I+A A G+ KE + L++ + I PD+ TF
Sbjct: 573 AKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAIALYRSLEDMGIKPDSVTFT 632
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
SLLSAC+ G I +V +F M
Sbjct: 633 SLLSACN------------------------------------HAGDIDQAVGVFTAMVL 656
Query: 536 RNVIT-----WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
++ +T + ++ L G ++A+ EM +KPD + +++ +C +
Sbjct: 657 KHGMTPCLEHYGLMVDLLASAGETEKAIRLIEEMP---YKPDARMIQSLVASCNK----Q 709
Query: 591 EGMELFERMNRS-YGVEPE 608
EL E ++R EPE
Sbjct: 710 HKTELVEYLSRHLLESEPE 728
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 185/599 (30%), Positives = 300/599 (50%), Gaps = 46/599 (7%)
Query: 44 FGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLD----EVVSVFE 99
L +C S ++ +L + + F ++ + +L+G Y C D E+V
Sbjct: 7 LSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFY--FSCHDYASAELVFQTN 64
Query: 100 DMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLE 158
D P + WN+++S + + + + LF +L S V ++ V+ +
Sbjct: 65 DCPL-DVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVI 123
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+G +IH ++K G +++ V +SL+NMY +C A K+F + RDV WN +I
Sbjct: 124 YGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYF 183
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ AL+ + +M PN TF V++SC L N GK +H ++I+ + D F
Sbjct: 184 KDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAF 243
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLG 337
V SALVD Y KC LE A F +I KN ++WNA+I GY+ K S + I LL+ + G
Sbjct: 244 VLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEG 303
Query: 338 YRPNEFTFSHVL-RSSLAFQLLQ---LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
+P T + ++ SS + QL +H I+R + ++ SL+ Y K G +S A
Sbjct: 304 TKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSA- 362
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
ET+ + + ++VSWN++I+ G++
Sbjct: 363 -----------------------------ETI--FRTISKNEVVSWNVMISGHVMVGNHI 391
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
+ L ++ M+ + PD TF S LSACS+L L G LH I + + ++ V L
Sbjct: 392 QALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHK-LEANEIVMGAL 450
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+DMY KCG + + K+F+++ R++++WT++I A G +G A AL F EM+ L + D
Sbjct: 451 LDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADS 510
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII 632
V +AVL+AC H GLV EG F M Y ++P ++HY C++DLL R G L EA +I+
Sbjct: 511 VTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEIL 569
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 239/487 (49%), Gaps = 43/487 (8%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEGA 59
P R+V +N++IS Y + G E AL+ F M GFEP TF ++S + LN G
Sbjct: 168 PQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGK 227
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ +++ + DAFV +AL+ +YG+ GCL+ VFE +PRK+ +TWN++++ +
Sbjct: 228 EVHRELIERRIL-LDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLK 286
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G C+ L + T + +I+ S L G+ IHG +++N D ++ +
Sbjct: 287 GDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFID 346
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
SL++ YF+C + SAE +F+ + +VVSWN +I N +AL +Y M V
Sbjct: 347 VSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVK 406
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ TF +++C+ L G+ +H +I + LE + V AL+D YAKC +++ A
Sbjct: 407 PDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKL 466
Query: 300 FSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F ++ +++VSW ++I Y S + ++ L E+ +L R + TF VL
Sbjct: 467 FHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVL--------- 517
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGI 414
++ + +GL+ + + + + + P + + +
Sbjct: 518 ----------------------SACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDL 555
Query: 415 YNRTGQYNETVKLL--SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
R G+ +E ++L S+ R DI + + +AC + ++ +++ K + + PD+
Sbjct: 556 LGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKML--IEVDPDDP 613
Query: 473 TFVSLLS 479
+ LLS
Sbjct: 614 STYILLS 620
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 188/422 (44%), Gaps = 58/422 (13%)
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
T + + +C + GK IH ++ + ++ + +L+ FY C + A L F
Sbjct: 5 TLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTN 64
Query: 304 SNKNIVS-WNALILGYASKSSPTSIFLLIELLQL-------GY-RPNEFTFSHVLRSSLA 354
VS WNAL+ Y T+ F +E LQL Y RP+ +T+ VL++
Sbjct: 65 DCPLDVSLWNALLSAY------TNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGG 118
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+ G + ++L K+GLI D + +N +
Sbjct: 119 LGR-------VIYGRRIHNHLL--------KTGLIWDVFVGSSLMN-------------M 150
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y + Q+ + +KL + + D+ WN VI+ +G + L+ F M+ P++ TF
Sbjct: 151 YAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTF 210
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
++S+C++L NL G +H + + I+ D FV + L+DMYGKCG + + ++F ++
Sbjct: 211 TVVVSSCTRLLNLERGKEVHRELIERRIL-LDAFVLSALVDMYGKCGCLEMAKEVFEKIP 269
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC------RHGGL 588
+N ITW A+I+ L G ++ +E M G KP + L +++ A RHG
Sbjct: 270 RKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKF 329
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ G L R++ ++ + +D + G++ AE I T+ + W +
Sbjct: 330 I-HGYILRNRIDVDIFIDVSL------IDFYFKCGYVSSAETIFRTIS-KNEVVSWNVMI 381
Query: 649 EG 650
G
Sbjct: 382 SG 383
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 125/259 (48%), Gaps = 5/259 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL--SCDSLNPVEG 58
+P +N +++N++I+ YS G + + + M + G +PT T ++ S S+ G
Sbjct: 268 IPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHG 327
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +L+N + D F+ +L+ Y + G + ++F + + +V+WN ++S
Sbjct: 328 KFIHGYILRNRID-VDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVM 386
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + ++ + V +F + S L+ G ++H +I + + +V
Sbjct: 387 VGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIV 446
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+L++MY +C + A K+F + RD+VSW ++I A +AL L+ M V
Sbjct: 447 MGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNV 506
Query: 239 FPNQTTFVYVINSC--AGL 255
+ TF+ V+++C AGL
Sbjct: 507 RADSVTFLAVLSACSHAGL 525
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 248/467 (53%), Gaps = 35/467 (7%)
Query: 192 IWS-AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
IW+ A K+F + R++V+W +I A+ A++L+L M + P++ T+ V++
Sbjct: 5 IWAPAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLS 64
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC---DNLEGAHLCFSEISNKN 307
+C L LGK +H++VI+ L DV VG +LVD YAKC +++ + F ++ N
Sbjct: 65 ACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHN 124
Query: 308 IVSWNALILGYAS--KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLII 365
++SW A+I YA + +I L +++ RPN F+FS VL++
Sbjct: 125 VMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKA-------------- 170
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
G+L Y + S + L I N + +Y R+G+ +
Sbjct: 171 ----------CGNLSDPYTGEQVYS----YAVKLGIASVNCVGNSLISMYARSGRMEDAR 216
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
K L ++VS+N ++ A N +E LF + I +TF SLLS + +
Sbjct: 217 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 276
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
+ G +HG + K S+ +CN LI MY +CG+I ++ ++FNEM DRNVI+WT++I
Sbjct: 277 AMGKGEQIHGRLLKGGY-KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 335
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
+ +GFA RALE F +M G KP+ + +AVL+AC H G++ EG + F M + +G+
Sbjct: 336 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 395
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
P M+HY C+VDLL R G L EA + I +MP +AL+WRT L C+
Sbjct: 396 VPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACR 442
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 252/485 (51%), Gaps = 30/485 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+RN+V++ +I+ +++ G DA+ +FL M G+ P +FT+ +LS C L + G
Sbjct: 16 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 75
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGR---HGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
QL + V++ GL D VG +L+ +Y + G +D+ VFE MP ++++W +I++
Sbjct: 76 KQLHSRVIRLGL-ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA 134
Query: 116 FGKHGFVE-DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + G + + + LFC+++ + SF V+ N D GEQ++ +K G
Sbjct: 135 YAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIAS 194
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V NSL++MY + + A K F + +++VS+N I+ A++ +A L+ ++
Sbjct: 195 VNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIA 254
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ + TF +++ A + G+ IH +++K + + + +AL+ Y++C N+E
Sbjct: 255 DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIE 314
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F+E+ ++N++SW ++I G+A T ++ + ++L+ G +PNE T+ VL +
Sbjct: 315 AAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSAC- 373
Query: 354 AFQLLQLHCLIIRMGYENY-----EYVLGSLMTSYA-------KSGLISDALAFVTALNI 401
H +I G +++ E+ + M YA +SGL+ +A+ F+ ++ +
Sbjct: 374 ------SHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 427
Query: 402 PRAVVPANIIAG---IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
+ + G ++ T +++ + E D ++ ++ A G +K+V+++
Sbjct: 428 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 487
Query: 459 FKYMR 463
K M+
Sbjct: 488 RKSMK 492
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 230/489 (47%), Gaps = 49/489 (10%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF+ MP ++LVTW +++ F + G D + LF ++ S ++ V+ +
Sbjct: 12 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 71
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE---KMFKDVEIRDVVSWNTI 213
L G+Q+H VI+ G ++ V SLV+MY +CA S + K+F+ + +V+SW I
Sbjct: 72 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 131
Query: 214 IGALAESENFGK-ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
I A A+S K A+EL+ +M + PN +F V+ +C L + G+ +++ +K
Sbjct: 132 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI- 331
+ VG++L+ YA+ +E A F + KN+VS+NA++ GYA FLL
Sbjct: 192 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 251
Query: 332 ELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
E+ G + FTF+ +L + + + Q+H +++ GY++ + + +L++ Y++ G
Sbjct: 252 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 311
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV----KLLSQLERPDIVSWNIVI 443
I A + + ++I G + + G + K+L +P+ +++ V+
Sbjct: 312 NIEAAFQVFNEMEDRNVISWTSMITG-FAKHGFATRALEMFHKMLETGTKPNEITYVAVL 370
Query: 444 AACAH-----------NGDYKE----------------------VLELFKYMRAARIYPD 470
+AC+H N YKE ++E +++ + + D
Sbjct: 371 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 430
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ +LL AC N LG +I + E ++ +L +++ G VKI
Sbjct: 431 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYI--LLSNLHASAGQWKDVVKIR 488
Query: 531 NEMTDRNVI 539
M +RN+I
Sbjct: 489 KSMKERNLI 497
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 159/495 (32%), Positives = 253/495 (51%), Gaps = 7/495 (1%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
+H +I +G +++ L+++ Q + A +F + + +N +I + S +
Sbjct: 58 VHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSND 117
Query: 223 FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSA 282
K+L L+ +M PNQ TF +V+ +CA +HA+ IK + V +A
Sbjct: 118 PMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNA 177
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPN 341
++ Y C + A F +IS++ IVSWN++I GY+ +I L E+LQLG +
Sbjct: 178 ILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEAD 237
Query: 342 EFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
FT +L +S L L H I+ G E V +L+ YAK G + A
Sbjct: 238 VFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFD 297
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
+ + + VV + Y G V++ + + ++VSWN +I G Y E +E
Sbjct: 298 QM-LDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVE 356
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
LF M + + PD+ T VS+LS CS +LALG H I II+ +CN LIDMY
Sbjct: 357 LFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDN-IITVSVTLCNSLIDMY 415
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
KCG++ +++ IF M ++NV++W +I AL L+GF + A+E F+ M+ G PD +
Sbjct: 416 AKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFT 475
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
+L+AC H GLV G F+ M ++ + P ++HY C+VDLL R G L EA +I MP
Sbjct: 476 GLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPV 535
Query: 638 PPNALIWRTFLEGCQ 652
P+ ++W L C+
Sbjct: 536 KPDVVVWGALLGACR 550
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/503 (24%), Positives = 225/503 (44%), Gaps = 70/503 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
+P N +N +I YS +L +F M++ G P QFTF +L + P E
Sbjct: 97 IPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEA 156
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A +K G+ A V A+L Y + VF+D+ +++V+WNS+++ + K
Sbjct: 157 VIVHAQAIKLGMG-PHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSK 215
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
GF ++ + LF E+++ V + V ++ S +L+ G +H ++ G + + +V
Sbjct: 216 MGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIV 275
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA---------------------- 216
N+L++MY +C + A+ +F + +DVVSW +++ A
Sbjct: 276 TNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNV 335
Query: 217 ---------LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
L + + +A+EL+ RM + V P+ T V +++ C+ + LGK H
Sbjct: 336 VSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCY 395
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSI 327
+ N + V + ++L+D YAKC L+ A F + KN+VSWN +I A
Sbjct: 396 ICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEA 455
Query: 328 FLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
+ + +Q G P+E TF+ +L + H ++ MG ++ +
Sbjct: 456 IEMFKSMQASGLYPDEITFTGLLSAC-------SHSGLVDMGRYYFDIM----------- 497
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAA 445
++ I V + + R G E + L+ ++ +PD+V W ++ A
Sbjct: 498 ---------ISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGA 548
Query: 446 CAHNGD-------YKEVLELFKY 461
C G+ K++LEL ++
Sbjct: 549 CRIYGNLEIAKQIMKQLLELGRF 571
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 181/374 (48%), Gaps = 46/374 (12%)
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P T ++++ C+ ++ K +HA++I + L V L+ + +L AHL
Sbjct: 37 PTHQTLHHLLDQCSSMKRL---KLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLL 93
Query: 300 FSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLA---- 354
F +I N +N LI GY++ + P S+ L +++ G PN+FTF VL++ A
Sbjct: 94 FDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFY 153
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
++ + +H I++G + V +++T+Y LI A + I
Sbjct: 154 WEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSA---------------RQVFDDI 198
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+RT IVSWN +IA + G E + LF+ M + D +T
Sbjct: 199 SDRT-----------------IVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTL 241
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
VSLLSA SK CNL LG +H I T + D+ V N LIDMY KCG + + +F++M
Sbjct: 242 VSLLSASSKHCNLDLGRFVHLYIVITG-VEIDSIVTNALIDMYAKCGHLQFAKHVFDQML 300
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
D++V++WT++++A G + A++ F M + V+ +++ G E +E
Sbjct: 301 DKDVVSWTSMVNAYANQGLVENAVQIFNHMPV----KNVVSWNSIICCLVQEGQYTEAVE 356
Query: 595 LFERMNRSYGVEPE 608
LF RM S GV P+
Sbjct: 357 LFHRMCIS-GVMPD 369
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 158/541 (29%), Positives = 272/541 (50%), Gaps = 38/541 (7%)
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
K G +++ E+ ++V++T S+ + + L G IH + + +
Sbjct: 62 LSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPS 121
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ N L+ MY C +K+F ++ ++++VSW +I A A++ KA+ L+ M
Sbjct: 122 GSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQA 181
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ PN ++ ++ SC G LGK IH+ VI+ L ++ V +A+ + Y +C LEG
Sbjct: 182 SGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEG 241
Query: 296 AHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A L F + +N V+W L++GY +K ++ L + G +EF FS VL+
Sbjct: 242 AKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCG 301
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ Q+H I+++G E+ V L+ Y K G I A
Sbjct: 302 LEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESA------------------ 343
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
Y G+ +E P+ VSW+ +I+ + +G ++ +++F +R+ + +
Sbjct: 344 ----YRSFGRISE----------PNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLN 389
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
++ + S+ AC+ NL +GS HG K ++S + + ++ MY KCG + + + F
Sbjct: 390 SFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSY-LYGESAMVTMYSKCGRLDYARRAF 448
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + + + WTA+IS +G A AL FR M+ G +P+ V IAVLTAC H GLV
Sbjct: 449 ESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVA 508
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
E + M+R YGV+P +DHY C++D R G L+EA ++I MPF P+A+ W++ L G
Sbjct: 509 EAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGG 568
Query: 651 C 651
C
Sbjct: 569 C 569
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 134/536 (25%), Positives = 257/536 (47%), Gaps = 39/536 (7%)
Query: 17 SRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQASVLKNGLFCADA 75
S+ G +++A M + T ++ L +C L + +L L+ +
Sbjct: 63 SKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSG 122
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
+ LL +Y G +V VF++M K+LV+W ++S + K+G +E + LF ++ S
Sbjct: 123 SIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQAS 182
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
+ + ++ ++ LE G+QIH VI+ + + V ++ NMY +C + A
Sbjct: 183 GIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGA 242
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
+ +F ++ ++ V+W ++ +++ ALEL+ RM+++ V ++ F V+ C GL
Sbjct: 243 KLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGL 302
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
++ +G+ IH+ ++K E +V VG+ LVDFY KC ++E A+ F IS N VSW+ALI
Sbjct: 303 EDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALI 362
Query: 316 LGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYE 370
G++ I + L G N F ++ V ++ A L Q H I+ G
Sbjct: 363 SGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLV 422
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+Y Y +++T Y+K G + Y R +
Sbjct: 423 SYLYGESAMVTMYSKCGRLD------------------------YAR--------RAFES 450
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
++ PD V+W +I+ A++G+ E L F+ M++ + P+ TF+++L+ACS +A
Sbjct: 451 IDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEA 510
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALI 545
G + + + + +ID Y + G + ++++ N M + + ++W +L+
Sbjct: 511 KQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLL 566
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 212/458 (46%), Gaps = 40/458 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
+N+VS+ +ISAY++ G +E A+R+F M G P + LL SC + +E G Q+
Sbjct: 151 KNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQI 210
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ V++ L A+ V TA+ +Y R G L+ VF+ M ++ VTW ++ + +
Sbjct: 211 HSHVIRAQLN-ANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKK 269
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+E + LF + V L E F V+ +D + G QIH ++K G + E+ V
Sbjct: 270 LEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTP 329
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
LV+ Y +C I SA + F + + VSW+ +I ++S ++++ + + V N
Sbjct: 330 LVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLN 389
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ V +CA N +G H IK L ++ SA+V Y+KC L+ A F
Sbjct: 390 SFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFE 449
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQL 360
I + V+W A+I GYA + +Q G RPN TF VL
Sbjct: 450 SIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVL----------- 498
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYN 416
T+ + SGL+++A ++ +++ V P + + Y+
Sbjct: 499 --------------------TACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYS 538
Query: 417 RTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYK 453
R G E ++L++++ PD +SW ++ C + D K
Sbjct: 539 RAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLK 576
>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 784
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 187/666 (28%), Positives = 329/666 (49%), Gaps = 62/666 (9%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGAQL 61
+++ +NSII ++ G + A +L M P QFT ++S C L G +
Sbjct: 101 KDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNI 160
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
K GLF ++ +G++ + +Y + G ++ +F ++ K +VTW +++ G+
Sbjct: 161 HGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIV-----GY 215
Query: 122 VED--------CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
V++ C+F E+ R + + L G+ +HGL +KNGF
Sbjct: 216 VQNNESGRGLKCLF---EMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFL 272
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+V +++++MY +C A + F ++ +D++SW +II ++ + L L+ M
Sbjct: 273 CFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEM 332
Query: 234 SVDIVFPNQTTFVYVINSCA--GLQNS---ILGKSIHAKVIKNALECDVFVGSALVDFYA 288
+ P++ ++ SC G NS GK+ HA+++K +AL+ Y
Sbjct: 333 QASEIIPDE-----IVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYC 387
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS-IFLLIELLQLGYRPNEFTFSH 347
K +L A+ F +K+ W+ +ILGY++ I L E+L LG P+ +
Sbjct: 388 KFGHLGTANKIFHSF-HKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVS 446
Query: 348 VLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVV 406
V+ S ++G N +G + YA K+ +I + V
Sbjct: 447 VISS------------CSQVGAIN----IGRSIHCYAIKNSIIEN-------------VS 477
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
AN + +Y ++G T ++ + + D++SWN +I++ +G E + LF M +
Sbjct: 478 VANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEK 537
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
+YP+ T + +LSAC+ L +L G +H IK+ S+ T + LIDMY KCG + +S
Sbjct: 538 VYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNIT-IRTALIDMYAKCGELETS 596
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
K+FN +R+VI W +IS G++G + A+E F+ ME KP+ +++L+AC H
Sbjct: 597 RKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHT 656
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
G V EG LF+RM + YG+EP + HY ++DLL R G L+ AE ++ +MP P+ +W +
Sbjct: 657 GHVLEGRHLFDRMQK-YGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGS 715
Query: 647 FLEGCQ 652
L C+
Sbjct: 716 LLSACK 721
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 233/517 (45%), Gaps = 44/517 (8%)
Query: 148 IHGLSNEQDLEFGE--QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR 205
+H ++ +L F Q H L+I G + A L+ Y + +F+ + +
Sbjct: 42 LHSFFSKPNLTFQSLLQFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSK 101
Query: 206 DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
D+ WN+II + + ++ +A + YL+M PNQ T V+++CA L G +IH
Sbjct: 102 DIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIH 161
Query: 266 AKVIKNALEC-DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-S 323
K L + +GS+ + Y+KC ++E A + FSEI+ K++V+W ALI+GY + S
Sbjct: 162 GLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNES 221
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSL 379
+ L E+ ++G PN T ++ + L LH L ++ G+ +E V ++
Sbjct: 222 GRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTI 281
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
++ +Y+R G E + +L++ D++SW
Sbjct: 282 LS--------------------------------MYSRCGSPEEAYRCFCKLDQKDLISW 309
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+IA + G E L LF M+A+ I PD +L + G + H I K
Sbjct: 310 TSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILK 369
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+ + N L+ MY K G +G++ KIF+ ++ W+ +I G ++ +
Sbjct: 370 -QCCALSGITHNALLSMYCKFGHLGTANKIFHSF-HKSSEDWSTMILGYSNMGQKEKCIS 427
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
REM LG +PD +L++V+++C G + G + ++ +E + + ++D+
Sbjct: 428 FLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIE-NVSVANSLMDMY 486
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRI 656
+ GH+ +I + + W T + ++ I
Sbjct: 487 GKSGHVTATWRIFHR-TLQRDVISWNTLISSYKQSGI 522
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 218/500 (43%), Gaps = 63/500 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
+ ++++S+ SII+ +S+ G + + L +F M P + +L +S EG
Sbjct: 301 LDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEG 360
Query: 59 AQLQASVLKNGLFCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
A +LK CA ALL +Y + G L +F KS W++++ +
Sbjct: 361 KAFHARILKQC--CALSGITHNALLSMYCKFGHLGTANKIFHSF-HKSSEDWSTMILGYS 417
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G E C+ E++ +S V VI S + G IH IKN +
Sbjct: 418 NMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVS 477
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VANSL++MY + + + ++F RDV+SWNT+I + +S +A+ L+ +M +
Sbjct: 478 VANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEK 537
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V+PN+ T + V+++CA L + G+ IH + +N E ++ + +AL+D YAKC LE +
Sbjct: 538 VYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSR 597
Query: 298 LCFSEISNKNIVSWNALILGYASK---SSPTSIFLLIELLQLGYRPNEFTF--------- 345
F+ ++++ WN +I Y S IF L+E + +PN TF
Sbjct: 598 KLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLME--ESNIKPNAQTFLSLLSACNH 655
Query: 346 -SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
HVL F +Q + G E S++ +SG + A A V ++ I
Sbjct: 656 TGHVLEGRHLFDRMQ------KYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPIT-- 707
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
PD W +++AC + +++ + L +Y A
Sbjct: 708 -----------------------------PDGTVWGSLLSACKIHNEFEVGVRLARY--A 736
Query: 465 ARIYPDN---YTFVSLLSAC 481
P N Y +S L +C
Sbjct: 737 IESDPKNDGYYIILSDLYSC 756
>gi|449453101|ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
gi|449521874|ref|XP_004167954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
Length = 697
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 161/597 (26%), Positives = 298/597 (49%), Gaps = 37/597 (6%)
Query: 85 YGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
YG+ GCL + +F++MP++ +WN++++ + ++G+ + + L+ +L +S V TE +
Sbjct: 104 YGKCGCLKDARELFDEMPQRDGGSWNAMITAYTQNGYALEALNLYLDLNKSGVYATEVTL 163
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
++ + L F QIHG ++K GF +++ +SLV++Y +C + A MF +++
Sbjct: 164 ASILRSCGSVLALHFSRQIHGHIVKCGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQN 223
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
R+ VSWN I+ E N +A+ ++ +M + + P+ TF + +C+ + I G I
Sbjct: 224 RNDVSWNVIVRRYLEVGNGKEAVSMFFQMFRESLMPSSFTFSNALIACSRMAALIEGGQI 283
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS- 323
H V+K LE + + S+L+D Y KC L AH F++ S++N++SW +++ YA+
Sbjct: 284 HGIVVKVGLEENEVISSSLIDMYVKCGTLANAHQVFTQPSSRNLISWTSMVYAYATSGDV 343
Query: 324 ----------PTSIFLLIELLQLGY-----RPNEFTFSHVLRSSLAFQLLQLHCLIIRMG 368
P + + GY F H++RSS+ CLI+ +
Sbjct: 344 LKARELFNEMPERNVISWNAMLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVC 403
Query: 369 YENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
+ + G + + ++G ++ + N + +Y + G
Sbjct: 404 TGSSDVERGKQVHGFVYRTGFYAN-------------LYIGNALLDMYGKCGNLKSAKVW 450
Query: 428 LSQLER-PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
Q+ + D VSWN ++ A A +G ++ + +F M+ P+N+TF +LL AC+ +
Sbjct: 451 FYQMSQWRDKVSWNALLTAHARHGMSEQAMTIFSEMQL-ETDPNNFTFATLLGACANMFA 509
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L G +HG + + + D + L+DMY KC + ++K+F + R+V+ W ++I
Sbjct: 510 LEHGKQIHGFMVRNNY-AIDIVLTGALVDMYCKCRELKYALKVFEHVASRDVVLWNSIIL 568
Query: 547 ALGLNGFAQRALEKFREMEFL-GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
N A++ F+ M G KPD V +L AC H LV G + F+ M+ + V
Sbjct: 569 GCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGILLACLHENLVELGRKYFDSMSEKFCV 628
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ---RCRIAKY 659
P ++HY C+V+L ++G++ E EK I MPF P + C+ R+A++
Sbjct: 629 IPRLEHYECMVELYGQHGNMDELEKFINNMPFDPTVPMLERIFNACREHGHSRLAEW 685
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 245/483 (50%), Gaps = 13/483 (2%)
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ + N + Y +C + A ++F ++ RD SWN +I A ++ +AL LYL ++
Sbjct: 94 IFLLNRAIEAYGKCGCLKDARELFDEMPQRDGGSWNAMITAYTQNGYALEALNLYLDLNK 153
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V+ + T ++ SC + + IH ++K +V + S+LVD Y KC +
Sbjct: 154 SGVYATEVTLASILRSCGSVLALHFSRQIHGHIVKCGFVGNVILESSLVDVYGKCRLMND 213
Query: 296 AHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVL----R 350
A F EI N+N VSWN ++ Y + ++ + ++ + P+ FTFS+ L R
Sbjct: 214 ARSMFDEIQNRNDVSWNVIVRRYLEVGNGKEAVSMFFQMFRESLMPSSFTFSNALIACSR 273
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ + Q+H +++++G E E + SL+ Y K G +++A T + R ++
Sbjct: 274 MAALIEGGQIHGIVVKVGLEENEVISSSLIDMYVKCGTLANAHQVFTQPS-SRNLISWTS 332
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ Y +G + +L +++ +++SWN ++A H+ ++E LE MR++ D
Sbjct: 333 MVYAYATSGDVLKARELFNEMPERNVISWNAMLAGYIHSSQWEEALEFVHLMRSSIKDID 392
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
T +L+ C+ ++ G +HG + +T ++ ++ N L+DMYGKCG++ S+ F
Sbjct: 393 RTTLCLILNVCTGSSDVERGKQVHGFVYRTGFY-ANLYIGNALLDMYGKCGNLKSAKVWF 451
Query: 531 NEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
+M+ R+ ++W AL++A +G +++A+ F EM+ L P+ +L AC + +
Sbjct: 452 YQMSQWRDKVSWNALLTAHARHGMSEQAMTIFSEMQ-LETDPNNFTFATLLGACANMFAL 510
Query: 590 REGMELFERMNR-SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
G ++ M R +Y ++ + +VD+ + LK A K+ + + ++W + +
Sbjct: 511 EHGKQIHGFMVRNNYAIDIVLT--GALVDMYCKCRELKYALKVFEHVA-SRDVVLWNSII 567
Query: 649 EGC 651
GC
Sbjct: 568 LGC 570
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 145/574 (25%), Positives = 269/574 (46%), Gaps = 76/574 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP R+ S+N++I+AY++ GY +AL ++L + G T+ T +L SC S+ +
Sbjct: 120 MPQRDGGSWNAMITAYTQNGYALEALNLYLDLNKSGVYATEVTLASILRSCGSVLALHFS 179
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ ++K G F + + ++L+ +YG+ +++ S+F+++ ++ V+WN IV + +
Sbjct: 180 RQIHGHIVKCG-FVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVRRYLE 238
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ + +F ++ R + + +F + S L G QIHG+V+K G + ++
Sbjct: 239 VGNGKEAVSMFFQMFRESLMPSSFTFSNALIACSRMAALIEGGQIHGIVVKVGLEENEVI 298
Query: 179 ANSLVNMYFQCAGI-----------------WS--------------AEKMFKDVEIRDV 207
++SL++MY +C + W+ A ++F ++ R+V
Sbjct: 299 SSSLIDMYVKCGTLANAHQVFTQPSSRNLISWTSMVYAYATSGDVLKARELFNEMPERNV 358
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
+SWN ++ S + +ALE M I ++TT ++N C G + GK +H
Sbjct: 359 ISWNAMLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCTGSSDVERGKQVHGF 418
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN-KNIVSWNALILGYASKSSPTS 326
V + ++++G+AL+D Y KC NL+ A + F ++S ++ VSWNAL+ +A
Sbjct: 419 VYRTGFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQ 478
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTS 382
+ +QL PN FTF+ +L + L Q+H ++R Y + G+L+
Sbjct: 479 AMTIFSEMQLETDPNNFTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDM 538
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
Y K + AL K+ + D+V WN +
Sbjct: 539 YCKCRELKYAL--------------------------------KVFEHVASRDVVLWNSI 566
Query: 443 IAACAHNGDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSS-LHGLIKKT 500
I C HN ++LF+ M I PD+ TF +L AC + LG + +K
Sbjct: 567 ILGCCHNRRDMLAIKLFQLMTMEEGIKPDHVTFQGILLACLHENLVELGRKYFDSMSEKF 626
Query: 501 EIISS-DTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+I + + C ++++YG+ G++ K N M
Sbjct: 627 CVIPRLEHYEC--MVELYGQHGNMDELEKFINNM 658
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 183/412 (44%), Gaps = 59/412 (14%)
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
E D + + I E GKA+ + + FP T + + C+ + + +
Sbjct: 23 EFTDANAATSTILRYLEEGRLGKAV--LILFNSPFPFP-HTLYTRLFQLCSSTRALVEAR 79
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
+ + + +F+ + ++ Y KC L+ A F E+ ++ SWNA+I Y
Sbjct: 80 KVESHLATFCPTPPIFLLNRAIEAYGKCGCLKDARELFDEMPQRDGGSWNAMITAYTQNG 139
Query: 323 -SPTSIFLLIELLQLGYRPNEFTFSHVLRSS---LAFQL-LQLHCLIIRMGYENYEYVLG 377
+ ++ L ++L + G E T + +LRS LA Q+H I++ G+ +
Sbjct: 140 YALEALNLYLDLNKSGVYATEVTLASILRSCGSVLALHFSRQIHGHIVKCGFVGNVILES 199
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
SL+ Y K L++DA + + +++ + V
Sbjct: 200 SLVDVYGKCRLMNDARS--------------------------------MFDEIQNRNDV 227
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SWN+++ G+ KE + +F M + P ++TF + L ACS++ L G +HG++
Sbjct: 228 SWNVIVRRYLEVGNGKEAVSMFFQMFRESLMPSSFTFSNALIACSRMAALIEGGQIHGIV 287
Query: 498 KK-----TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
K E+ISS LIDMY KCG++ ++ ++F + + RN+I+WT+++ A +G
Sbjct: 288 VKVGLEENEVISSS------LIDMYVKCGTLANAHQVFTQPSSRNLISWTSMVYAYATSG 341
Query: 553 FAQRALEKFREMEFLGFKPDR--VALIAVLTACRHGGLVREGMELFERMNRS 602
+A E F EM P+R ++ A+L H E +E M S
Sbjct: 342 DVLKARELFNEM------PERNVISWNAMLAGYIHSSQWEEALEFVHLMRSS 387
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 174/658 (26%), Positives = 310/658 (47%), Gaps = 111/658 (16%)
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF- 129
F FV L+ +Y + L VF+ MP++ V+WN+++ + G + LF
Sbjct: 73 FKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFD 132
Query: 130 ------CELV--------RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
C +V R ++F V+ S+ +D G QIHGL +K GFD +
Sbjct: 133 AMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCD 192
Query: 176 LLVANSLVNMYFQC-------------------AGIWS---------------------- 194
++ ++L++MY +C AG+ +
Sbjct: 193 VVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTAT 252
Query: 195 -------------AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
+ ++F + ++ S+N II A S+ +AL ++ + + +
Sbjct: 253 LDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLD 312
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ + +CA ++ + G +H +K+ + ++ V +A++D Y KC L A L F
Sbjct: 313 EVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFE 372
Query: 302 EISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
E+ +++ VSWNA+I + + ++ L + +LQ G P+EFT+ VL++ +Q L
Sbjct: 373 EMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNC 432
Query: 359 --QLHCLII--RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
++H II RMG +++ + +L+ Y+K G++ A
Sbjct: 433 GMEIHNRIIKSRMGLDSFVGI--ALIDMYSKCGMMEKA---------------------- 468
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
KL +L +VSWN +I+ + +E + F M + PDN+T+
Sbjct: 469 ----------EKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTY 518
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
++L C+ L + LG +H I K E+ SD ++ + L+DMY KCG++ IF +
Sbjct: 519 ATILDTCANLVTVELGKQIHAQIIKKEL-QSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 577
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+R+ +TW A++ +G + AL+ F M+ KP+ +AVL AC H GLV +G+
Sbjct: 578 NRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLH 637
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M +YG++P+++HY CVVD++ R G + +A ++I MPF +A+IWRT L C+
Sbjct: 638 YFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCK 695
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 239/477 (50%), Gaps = 18/477 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLN-PVEG 58
+P+ N+ S+N+II Y+R +AL MF + G + + G +C + +EG
Sbjct: 273 LPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEG 332
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K+ L ++ V A+L +YG+ G L E VFE+M + V+WN+I++ +
Sbjct: 333 LQVHGLSMKS-LCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 391
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G E + LF +++S + E ++ V+ + Q L G +IH +IK+ + V
Sbjct: 392 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFV 451
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA---ESENFGKALELYLRMSV 235
+L++MY +C + AEK+ + + VVSWN II + +SE K L M V
Sbjct: 452 GIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGV 511
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D P+ T+ ++++CA L LGK IHA++IK L+ D ++ S LVD Y+KC N++
Sbjct: 512 D---PDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQD 568
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
L F + N++ V+WNA++ GYA + E +QL +PN TF VLR+
Sbjct: 569 FQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGH 628
Query: 355 FQLLQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PRAVVPA 408
L++ H ++ G + ++ +SG +S AL + + AV+
Sbjct: 629 MGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWR 688
Query: 409 NIIA--GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+++ I+ + + QLE D ++ ++ A+ G + EV +L K MR
Sbjct: 689 TLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMR 745
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 148/568 (26%), Positives = 245/568 (43%), Gaps = 104/568 (18%)
Query: 141 ESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
+ +F + S+ + L G+Q H +I F + V N L+ MY +C+ + A K+F
Sbjct: 42 KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFD 101
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELY---------------LRMSVDIVFPNQTTF 245
+ RD VSWN ++ A + G A +L+ RM ++TTF
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTF 161
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC----DNLEG------ 295
V+ SC+ L++ G IH +K +CDV GSAL+D YAKC D+L G
Sbjct: 162 AVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFK 221
Query: 296 --------------------------------------------AHLCFSEISNKNIVSW 311
++ F+ + N N+ S+
Sbjct: 222 EMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSY 281
Query: 312 NALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYE 370
NA+I+GYA + LLQ G +E + S R+ C +I+ E
Sbjct: 282 NAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRA----------CAVIKGDLE 331
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ V G M S +S + AN I +Y + G E + +
Sbjct: 332 GLQ-VHGLSMKSLCQSN-----------------ICVANAILDMYGKCGALVEACLVFEE 373
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+ D VSWN +IAA NG+ ++ L LF +M + + PD +T+ S+L AC+ L G
Sbjct: 374 MVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCG 433
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+H I K+ + D+FV LIDMY KCG + + K+ + + ++ V++W A+IS L
Sbjct: 434 MEIHNRIIKSR-MGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSL 492
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
++ A + F +M +G PD +L C + V G ++ ++ + E + D
Sbjct: 493 QKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK---ELQSD 549
Query: 611 HY--HCVVDLLVRYGHLKEAEKIITTMP 636
Y +VD+ + G++++ + I P
Sbjct: 550 AYISSTLVDMYSKCGNMQDFQLIFEKAP 577
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 164/497 (32%), Positives = 252/497 (50%), Gaps = 38/497 (7%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCA---GIWSAEKM-FKDVEIRDVVSWNTIIGA 216
+ IH +++ D + N L+N+ CA G + K+ F V+ ++ WNT+I
Sbjct: 33 KHIHARLLRLHLDQD----NYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRG 88
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
L + F A+ LY M PN T +V+ +CA + LG IH+ ++K + D
Sbjct: 89 LVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHD 148
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQ 335
VFV ++L+ Y KCDN + A F +I +KN+VSW A+I GY S +I +LL+
Sbjct: 149 VFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLE 208
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
+G +P+ F+ VL + R+G + G + Y ISD+
Sbjct: 209 MGLKPDSFSLVKVLAAC------------ARLG----DCTSGEWIDRY-----ISDS--- 244
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
+ R V A + +Y + G + S + DIVSW+ +I A NG ++
Sbjct: 245 ----GMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQA 300
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
L+LF M++ + PD YT V +LSAC+ L L LG L+ + E +S + + LID
Sbjct: 301 LDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLS-NPVLGTALID 359
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY KCGS+ + +IF M ++ + W A++ L +NG A+ F +E G +PD
Sbjct: 360 MYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENT 419
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
I +L C HGG V EG + F M R + + P ++HY C+VDLL R G L EA ++I M
Sbjct: 420 FIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNM 479
Query: 636 PFPPNALIWRTFLEGCQ 652
P PNA++W L GC+
Sbjct: 480 PMKPNAVVWGALLGGCK 496
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 228/490 (46%), Gaps = 52/490 (10%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQ 62
N+ +N++I +DA+ ++ M GF P FT +L L+ G ++
Sbjct: 78 NIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIH 137
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+ ++K G + D FV T+LL LY + D+ + VF+D+P K++V+W +I++ + G
Sbjct: 138 SLLVKAG-YDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHF 196
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ + F +L+ + S V V+ + D GE I + +G + VA SL
Sbjct: 197 REAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSL 256
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
++MY +C + A +F + +D+VSW+T+I A + +AL+L+ +M + + P+
Sbjct: 257 LDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDC 316
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T V V+++CA L LG + + +N + +G+AL+D Y+KC ++ A F+
Sbjct: 317 YTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTA 376
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLH 361
+ K+ V WNA+++G + ++F L L++ G RP+E TF
Sbjct: 377 MKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFI--------------- 421
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNR 417
L+ G +++ F + ++ P+ + + R
Sbjct: 422 ----------------GLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGR 465
Query: 418 TGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD-------YKEVLEL-----FKYMRA 464
G NE +L++ + +P+ V W ++ C + D K+++EL Y++
Sbjct: 466 AGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQL 525
Query: 465 ARIYPDNYTF 474
+ IY N+ +
Sbjct: 526 SNIYSGNHRW 535
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 152/322 (47%), Gaps = 7/322 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+PD+NVVS+ +II+ Y G+ +A+ F ++ G +P F+ +L +C L
Sbjct: 175 IPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSG 234
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + + + FV T+LL +Y + G L+ +F MP K +V+W++++ + +
Sbjct: 235 EWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFN 294
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + + LF ++ + + VGV+ + L+ G L+ +N F ++
Sbjct: 295 GLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG 354
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+L++MY +C + A ++F ++ +D V WN ++ L+ + + L+ + +
Sbjct: 355 TALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIR 414
Query: 240 PNQTTFVYVINSC--AGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEGA 296
P++ TF+ ++ C G N G+ + + +L + +VD + L A
Sbjct: 415 PDENTFIGLLCGCTHGGFVNE--GRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEA 472
Query: 297 HLCFSEISNK-NIVSWNALILG 317
H + + K N V W AL+ G
Sbjct: 473 HQLINNMPMKPNAVVWGALLGG 494
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 176/614 (28%), Positives = 288/614 (46%), Gaps = 42/614 (6%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L SC +L + + GL T LL Y G L VF+ PR
Sbjct: 69 LPSCGTLLSLRVLHARLLTHPQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTPRPDA 128
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSE-VALTESSFVG--VIHGLSNEQDLEFGEQI 163
++ +++ + D + L ++ R + FV + + +G +
Sbjct: 129 YSYGAMLWCLVQTERHADAVALHHDMRRRRPCPEAQDDFVLSLALKACIRSAEYSYGRSL 188
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H IK G + V NSLV+MY + + A K+F+ + R+VVSW ++I ++
Sbjct: 189 HCDAIKVG-GADGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFA 247
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
L L+ +M D V P++ T VI +C+ L G+ +H VIK L + F+ +AL
Sbjct: 248 SDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAAL 307
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNE 342
+D Y KC L+ A F E+S ++V W +I+GY +P ++ L ++ PN
Sbjct: 308 LDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNS 367
Query: 343 FTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
T + VL +S + L L H L +++G Y V +L+ YAK +S
Sbjct: 368 VTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVS-------- 419
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
E ++ ++ D+V+WN +I+ A N + L L
Sbjct: 420 ------------------------EADRIFGRISNKDVVAWNSMISGYAENNMGDDALML 455
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYG 518
FK M PD + V+ LSA L +L +G S+HG K +S + +V L+++Y
Sbjct: 456 FKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVS-NIYVDTALLNLYN 514
Query: 519 KCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
KCG + S+ ++F+EM DRN +TW A+I G+ G + ++ F EM G P+ +A +
Sbjct: 515 KCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTS 574
Query: 579 VLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFP 638
+L+ C H G+V G F+ M + + + P M HY C+VD+L R G+L++A + I MP
Sbjct: 575 ILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQ 634
Query: 639 PNALIWRTFLEGCQ 652
+ +W FL GC+
Sbjct: 635 ADTSVWGAFLHGCE 648
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 255/485 (52%), Gaps = 34/485 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
+PDRNVVS+ S+IS + G+ D L +F M P+++T +++ C +L + +G
Sbjct: 226 IPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQG 285
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ SV+K GL +++F+ ALL +Y + G LD VF+++ LV W +++ + +
Sbjct: 286 RWMHGSVIKQGLM-SNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQ 344
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G D + LF + + +A + V+ + +DL G+ IHGL +K G +V
Sbjct: 345 NGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVV 404
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LV+MY +C + A+++F + +DVV+WN++I AE+ AL L+ +MS+
Sbjct: 405 GNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGS 464
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ + V +++ L + ++GKSIH +K+A +++V +AL++ Y KC +L A
Sbjct: 465 SPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARR 524
Query: 299 CFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F E++++N V+W A+I GY + S SI L E+L+ G PN+ F+ +L +
Sbjct: 525 VFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTC----- 579
Query: 358 LQLHCLIIRMGYENYE-----YVLGSLMTSY-------AKSGLISDALAFVTALNIPRAV 405
H ++ G ++ + + M Y A++G + DAL F+ N+P
Sbjct: 580 --SHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFID--NMPMQA 635
Query: 406 ---VPANIIAG--IYNRTGQYNETVKLLSQL--ERPDIVSWNIVIAACAHNGDYKEVLEL 458
V + G +++R E +K + L ERPD+ + ++ NG + + L +
Sbjct: 636 DTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDL--YVLISNLYTSNGMWDKSLAI 693
Query: 459 FKYMR 463
++M+
Sbjct: 694 RRWMQ 698
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 144/544 (26%), Positives = 252/544 (46%), Gaps = 46/544 (8%)
Query: 40 TQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE 99
++++G L CD++ V GA D FV +L+ +Y + L+ VFE
Sbjct: 180 AEYSYGRSLHCDAIK-VGGA--------------DGFVMNSLVDMYAKAEDLECARKVFE 224
Query: 100 DMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF 159
+P +++V+W S++S ++GF D + LF ++ + V +E + VI S L
Sbjct: 225 RIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQ 284
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
G +HG VIK G ++ +L++MY +C + A +F ++ D+V W T+I +
Sbjct: 285 GRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQ 344
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ N AL L+L + PN T V+++ A L++ LGKSIH +K L V
Sbjct: 345 NGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVV 404
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GY 338
G+ALVD YAKC + A F ISNK++V+WN++I GYA + +L + + L G
Sbjct: 405 GNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGS 464
Query: 339 RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
P+ + + L +S+ CL + ++G + YA AFV+
Sbjct: 465 SPDAISVVNALSASV--------CL--------GDLLIGKSIHGYAVKH------AFVSN 502
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
+ + A++ +YN+ G ++ ++ + V+W +I GD + L
Sbjct: 503 IYVDTALL------NLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHL 556
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYG 518
F M +YP++ F S+LS CS + G + + I+ ++D+
Sbjct: 557 FGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLA 616
Query: 519 KCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFL-GFKPDRVAL 576
+ G++ +++ + M + W A + L+ Q A E + M L +PD L
Sbjct: 617 RAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVL 676
Query: 577 IAVL 580
I+ L
Sbjct: 677 ISNL 680
>gi|326522859|dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 691
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 180/575 (31%), Positives = 275/575 (47%), Gaps = 47/575 (8%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTE--SSF 144
+ G + + + +F+ MPRK++V W S VS ++G E +F ++V S VAL + +
Sbjct: 41 KAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNA 100
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
+ L GEQ+H L ++ GF + V + LV +Y +C +AE + +E
Sbjct: 101 ALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMES 160
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
DVV++ +++ AL S FG A E +M V PN+ T ++ +C L +LG I
Sbjct: 161 PDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPL---VLGVQI 217
Query: 265 HAKVIKN-ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS 323
H +IK V+ S LVDFY++ + A F + KN+V+W ++ +
Sbjct: 218 HGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGR 277
Query: 324 P-TSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQL-LQLHCLIIRMGYENYEYVLGSLM 380
P ++ L E++ G PNEF FS L + + L QLH L I+ G ++ V +L+
Sbjct: 278 PEDALQLFDEMISEGVVSPNEFAFSIALGACESIALGSQLHSLAIKHGLASHLRVSNALL 337
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
+ Y + GL+ A + +E PDIVSW
Sbjct: 338 SMYGRIGLVQQLEA--------------------------------MFRGIEDPDIVSWT 365
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
I+A NG ++ + L M + + P++Y F S+LS+C+ L L G H L K
Sbjct: 366 AAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLALK- 424
Query: 501 EIISSDTFVC--NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
+ D C N LI+MY KCG I + F+ M R+V +W +LI +G L
Sbjct: 425 --LGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVL 482
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER-MNRSYGVEPEMDHYHCVVD 617
+ F EM G +P+ L+ VL AC H GLV EG+ F M YG HY C+VD
Sbjct: 483 KAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTPPHYACMVD 542
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+L R G +A +I MPF P L+W+T L C+
Sbjct: 543 MLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCR 577
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 219/458 (47%), Gaps = 37/458 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M +VV++ S++SA R G A M+ G P + T +L+ C L V G
Sbjct: 158 MESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPL--VLGV 215
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ ++K F + + L+ Y R+G D +VF+++ K++VTW +++ + +
Sbjct: 216 QIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRD 275
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ED + LF E++ SE ++ + F I L + + G Q+H L IK+G L V+
Sbjct: 276 GRPEDALQLFDEMI-SEGVVSPNEFAFSI-ALGACESIALGSQLHSLAIKHGLASHLRVS 333
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L++MY + + E MF+ +E D+VSW I A ++ + KA+ L RM +
Sbjct: 334 NALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLT 393
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV--GSALVDFYAKCDNLEGAH 297
PN F V++SCA L G+ H +K L CDV G+AL++ Y+KC + A
Sbjct: 394 PNDYAFSSVLSSCADLALLDQGRQFHCLALK--LGCDVKTCTGNALINMYSKCGQIVPAR 451
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
L F + ++++ SWN+LI G+A + E+ G PNE T VL +
Sbjct: 452 LAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAAC---- 507
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
H ++ G + + L + T L P +++
Sbjct: 508 ---NHAGLVDEGVAFFRSAMAGL---------------YGTFLTPPHYACMVDML----G 545
Query: 417 RTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYK 453
R+G++++ + L+ ++ P ++ W ++A+C +G+ +
Sbjct: 546 RSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGNLE 583
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 150/584 (25%), Positives = 258/584 (44%), Gaps = 63/584 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV---- 56
MP +NVV++ S +S +R G E A MF M+ G F L+ +
Sbjct: 55 MPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNAALAACAAAGPGALR 114
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G Q+ + ++ G F DA+VG+ L+ LY R G +V M +V + S+VS
Sbjct: 115 TGEQVHSLAVRAG-FVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSAL 173
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYE 175
+ G +++ V E + ++ L G QIHG +IK GF
Sbjct: 174 CRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACC---PLVLGVQIHGYMIKAMGFSQS 230
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-S 234
+ +++LV+ Y + A+ +F +++ ++VV+W T++ AL+L+ M S
Sbjct: 231 VYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMIS 290
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+V PN+ F + +C ++ LG +H+ IK+ L + V +AL+ Y + ++
Sbjct: 291 EGVVSPNEFAFSIALGAC---ESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQ 347
Query: 295 GAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
F I + +IVSW A I Y + +I LL + G PN++ FS VL S
Sbjct: 348 QLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCA 407
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
LL Q HCL +++G + +L+ Y+K G I VPA
Sbjct: 408 DLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQI----------------VPAR 451
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ I ++ D+ SWN +I A +G+ VL+ F M + P
Sbjct: 452 LAFDI----------------MDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEP 495
Query: 470 DNYTFVSLLSACSKLCNLALG-----SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+ T + +L+AC+ + G S++ GL ++ + C ++DM G+ G
Sbjct: 496 NESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGT--FLTPPHYAC--MVDMLGRSGRFD 551
Query: 525 SSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREM 564
++ + EM + V+ W L+++ L+G + A EK E+
Sbjct: 552 DALCLIEEMPFEPGVLVWKTLLASCRLHGNLETGRLAAEKLVEL 595
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
+D K G + ++ +F+ M +NV+ WT+ +S L NG + A E F +M
Sbjct: 36 LDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADM 86
>gi|347954480|gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
Length = 807
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 179/688 (26%), Positives = 330/688 (47%), Gaps = 48/688 (6%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNGL 70
+S+ + G + +AL + M R +G +L + G Q+ A +LK G
Sbjct: 18 VSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGD 77
Query: 71 FCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
F A + ++ T L+ Y + L+ +F + +++ +W +I+ + + G E + F
Sbjct: 78 FYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGF 137
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
E++ + + V Q FG +HG V K G + + VA+SL +MY +C
Sbjct: 138 VEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKC 197
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A K+F + R+ V+WN ++ ++ + +A+ L M + + P + T +
Sbjct: 198 GVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVTVSTCL 257
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
++ A + GK HA I N LE D +G+++++FY K +E A + F + K++V
Sbjct: 258 SASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVV 317
Query: 310 SWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL----HCLI 364
+WN LI GY + + +L++ + + T S ++ ++ + Q L+L C
Sbjct: 318 TWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYC 377
Query: 365 IRMGYENYEYVLGS--------------------------------LMTSYAKSGLISDA 392
IR G E+ + VL S L+++YA SGL +A
Sbjct: 378 IRHGLES-DIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEA 436
Query: 393 LAFVTAL---NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER----PDIVSWNIVIAA 445
L + ++P V+ N+I R GQ NE ++ Q++ P+++SW ++
Sbjct: 437 LRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNG 496
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
NG +E + + M+ + + P+ +T LSAC L +L G S+HG I + + S
Sbjct: 497 LVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQQYSF 556
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
+ L+DMY KCG I + ++F + + A+ISA L G + A+ +R +E
Sbjct: 557 SASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLE 616
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G KPD + + ++L+AC +G V + +E+F M +G++P ++HY +VDLL G
Sbjct: 617 DGGVKPDNITITSLLSACNYGRDVNQAIEVFRDMVSKHGMKPCLEHYGLMVDLLASAGET 676
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQR 653
+A +++ MP+ P+A + ++ E C +
Sbjct: 677 DKALRLMEEMPYKPDARMVQSLFESCSK 704
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 151/620 (24%), Positives = 288/620 (46%), Gaps = 113/620 (18%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPV-EG 58
+PDRN V++N+++ Y + G E+A+R+ M G EPT+ T LS + + + EG
Sbjct: 210 IPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEG 269
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q A + NGL D +GT++L Y + G ++ +F+ M K +VTWN ++S + +
Sbjct: 270 KQSHAIAIVNGLEL-DNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQ 328
Query: 119 HGFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G VE+ +++ C+L+R E + + ++ ++ Q+L+ G++I I++G + +++
Sbjct: 329 QGLVEEAIYM-CQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIV 387
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+A++ V+MY +C I +A+K+F +D++ WNT++ A A+S G+AL L+ M ++
Sbjct: 388 LASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLES 447
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN T+ +I S L+N G+ AK ++F+ +
Sbjct: 448 VPPNVITWNLIILSL--LRN---GQVNEAK--------EMFLQMQSSGIFP--------- 485
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
N++SW ++ G S +I L ++ + G RPN FT + L S
Sbjct: 486 ---------NLISWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVAL--SACVN 534
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L LH G + Y++ + S++ S I ++V +Y
Sbjct: 535 LASLH-----FGRSIHGYIIRNQQYSFSAS--------------IETSLVD------MYA 569
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G N+ ++ ++ +N +I+A A G +E + L++ + + PDN T S
Sbjct: 570 KCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITS 629
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LLSAC+ YG+ + ++++F +M +
Sbjct: 630 LLSACN----------------------------------YGR--DVNQAIEVFRDMVSK 653
Query: 537 NVIT-----WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ + + ++ L G +AL R ME + +KPD + ++ +C +
Sbjct: 654 HGMKPCLEHYGLMVDLLASAGETDKAL---RLMEEMPYKPDARMVQSLFESCSK----QH 706
Query: 592 GMELFERMNRSYGVEPEMDH 611
EL E +++ + +E E D+
Sbjct: 707 KTELVEYLSK-HLLESEPDN 725
>gi|326487167|dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 691
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 180/575 (31%), Positives = 275/575 (47%), Gaps = 47/575 (8%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTE--SSF 144
+ G + + + +F+ MPRK++V W S VS ++G E +F ++V S VAL + +
Sbjct: 41 KAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNA 100
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
+ L GEQ+H L ++ GF + V + LV +Y +C +AE + +E
Sbjct: 101 ALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMES 160
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
DVV++ +++ AL S FG A E +M V PN+ T ++ +C L +LG I
Sbjct: 161 PDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPL---VLGVQI 217
Query: 265 HAKVIKN-ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS 323
H +IK V+ S LVDFY++ + A F + KN+V+W ++ +
Sbjct: 218 HGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGR 277
Query: 324 P-TSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQL-LQLHCLIIRMGYENYEYVLGSLM 380
P ++ L E++ G PNEF FS L + + L QLH L I+ G ++ V +L+
Sbjct: 278 PEDALQLFDEMISEGVVSPNEFAFSIALGACESIALGSQLHSLAIKHGLASHLRVSNALL 337
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
+ Y + GL+ A + +E PDIVSW
Sbjct: 338 SMYGRIGLVQQLEA--------------------------------MFRGIEDPDIVSWT 365
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
I+A NG ++ + L M + + P++Y F S+LS+C+ L L G H L K
Sbjct: 366 AAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLALK- 424
Query: 501 EIISSDTFVC--NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
+ D C N LI+MY KCG I + F+ M R+V +W +LI +G L
Sbjct: 425 --LGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVL 482
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER-MNRSYGVEPEMDHYHCVVD 617
+ F EM G +P+ L+ VL AC H GLV EG+ F M YG HY C+VD
Sbjct: 483 KAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTPPHYACMVD 542
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+L R G +A +I MPF P L+W+T L C+
Sbjct: 543 MLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCR 577
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 219/458 (47%), Gaps = 37/458 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M +VV++ S++SA R G A M+ G P + T +L+ C L V G
Sbjct: 158 MESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPL--VLGV 215
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ ++K F + + L+ Y R+G D +VF+++ K++VTW +++ + +
Sbjct: 216 QIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRD 275
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ED + LF E++ SE ++ + F I L + + G Q+H L IK+G L V+
Sbjct: 276 GRPEDALQLFDEMI-SEGVVSPNEFAFSI-ALGACESIALGSQLHSLAIKHGLASHLRVS 333
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L++MY + + E MF+ +E D+VSW I A ++ + KA+ L RM +
Sbjct: 334 NALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLT 393
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV--GSALVDFYAKCDNLEGAH 297
PN F V++SCA L G+ H +K L CDV G+AL++ Y+KC + A
Sbjct: 394 PNDYAFSSVLSSCADLALLDQGRQFHCLALK--LGCDVKTCTGNALINMYSKCGQIVPAR 451
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
L F + ++++ SWN+LI G+A + E+ G PNE T VL +
Sbjct: 452 LAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAAC---- 507
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
H ++ G + + L + T L P +++
Sbjct: 508 ---NHAGLVDEGVAFFRSAMAGL---------------YGTFLTPPHYACMVDML----G 545
Query: 417 RTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYK 453
R+G++++ + L+ ++ P ++ W ++A+C +G+ +
Sbjct: 546 RSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGNLE 583
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 150/584 (25%), Positives = 258/584 (44%), Gaps = 63/584 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV---- 56
MP +NVV++ S +S +R G E A MF M+ G F L+ +
Sbjct: 55 MPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNAALAACAAAGPGALR 114
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G Q+ + ++ G F DA+VG+ L+ LY R G +V M +V + S+VS
Sbjct: 115 TGEQVHSLAVRAG-FVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSAL 173
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYE 175
+ G +++ V E + ++ L G QIHG +IK GF
Sbjct: 174 CRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACC---PLVLGVQIHGYMIKAMGFSQS 230
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-S 234
+ +++LV+ Y + A+ +F +++ ++VV+W T++ AL+L+ M S
Sbjct: 231 VYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMIS 290
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+V PN+ F + +C ++ LG +H+ IK+ L + V +AL+ Y + ++
Sbjct: 291 EGVVSPNEFAFSIALGAC---ESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQ 347
Query: 295 GAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
F I + +IVSW A I Y + +I LL + G PN++ FS VL S
Sbjct: 348 QLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCA 407
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
LL Q HCL +++G + +L+ Y+K G I VPA
Sbjct: 408 DLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQI----------------VPAR 451
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ I ++ D+ SWN +I A +G+ VL+ F M + P
Sbjct: 452 LAFDI----------------MDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEP 495
Query: 470 DNYTFVSLLSACSKLCNLALG-----SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+ T + +L+AC+ + G S++ GL ++ + C ++DM G+ G
Sbjct: 496 NESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGT--FLTPPHYAC--MVDMLGRSGRFD 551
Query: 525 SSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREM 564
++ + EM + V+ W L+++ L+G + A EK E+
Sbjct: 552 DALCLIEEMPFEPGVLVWKTLLASCRLHGNLETGRLAAEKLVEL 595
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
+D K G + ++ +F+ M +NV+ WT+ +S L NG + A E F +M
Sbjct: 36 LDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADM 86
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 176/614 (28%), Positives = 288/614 (46%), Gaps = 42/614 (6%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L SC +L + + GL T LL Y G L VF+ PR
Sbjct: 36 LPSCGTLPSLRVLHARLLTHTQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTPRPDA 95
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSE-VALTESSFVG--VIHGLSNEQDLEFGEQI 163
++ ++ + + + L ++ R + FV + D +G ++
Sbjct: 96 YSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPEAQDDFVLSLALKACIRSADYGYGTRL 155
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H +K G + V NSLV+MY + + A K+F+ + R+VVSW +++ ++
Sbjct: 156 HCDAVKVG-GADGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFA 214
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
L L+ +M D V P++ T VI +C+ L G+ +H VIK L + F+ +AL
Sbjct: 215 ADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAAL 274
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNE 342
+D Y KC LE A F E+S ++V W +I+GY +P ++ L ++ PN
Sbjct: 275 LDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNS 334
Query: 343 FTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
T + VL +S + L L H + +++G Y V+ +L+ YAK +S+A
Sbjct: 335 VTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEA------ 388
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
NR + + D+V+WN +++ A N + L L
Sbjct: 389 -----------------NR---------IFGSISNKDVVAWNSMLSGYAENNMCNDALML 422
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYG 518
FK M PD + V LSA L +L +G S HG K +S + +V L+++Y
Sbjct: 423 FKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLS-NIYVSTALLNLYN 481
Query: 519 KCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
KCG + S+ ++F+EM DRN +TW A+I G+ G + +++ F EM G P+ VA +
Sbjct: 482 KCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTS 541
Query: 579 VLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFP 638
+L+ C H G+V F+ M + + + P M HY C+VD+L R G+L+EA + I MP
Sbjct: 542 ILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQ 601
Query: 639 PNALIWRTFLEGCQ 652
+ +W FL GC+
Sbjct: 602 ADTSVWGAFLHGCE 615
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 199/354 (56%), Gaps = 4/354 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
+P RNVVS+ S++S + G+ D L +F M P+++T +++ C +L + +G
Sbjct: 193 IPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQG 252
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ SV+K GL +++F+ ALL +Y + G L++ VF+++ LV W +++ + +
Sbjct: 253 RWMHGSVIKQGLM-SNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQ 311
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G D + LF + + + + V+ + +DL G IHG+ +K G +V
Sbjct: 312 NGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVV 371
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LV+MY +C + A ++F + +DVV+WN+++ AE+ AL L+ +MS+
Sbjct: 372 VNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGP 431
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ + V+ +++ L + ++GKS H +K+A +++V +AL++ Y KC +L A
Sbjct: 432 SPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARR 491
Query: 299 CFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
F E++++N V+W A+I GY + S SI L E+L+ G PN+ F+ +L +
Sbjct: 492 VFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILST 545
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/526 (25%), Positives = 241/526 (45%), Gaps = 33/526 (6%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G +L +K G AD FV +L+ +Y + G L+ VFE +P +++V+W S++S
Sbjct: 152 GTRLHCDAVKVG--GADGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCV 209
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++GF D + LF ++ + V +E + VI S L G +HG VIK G
Sbjct: 210 QNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSF 269
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
++ +L++MY +C + A+ +F ++ D+V W T+I ++ N AL L+L
Sbjct: 270 ISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFAN 329
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ PN T V+++ A L++ LG+SIH +K L V +ALVD YAKC + A+
Sbjct: 330 IVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEAN 389
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F ISNK++V+WN+++ GYA + +L + + L G P+ + H L +S+
Sbjct: 390 RIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVC-- 447
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L L+I + Y L Y + L++ +YN
Sbjct: 448 ---LGDLLIGKSFHGYAVKHAFLSNIYVSTALLN-----------------------LYN 481
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G ++ ++ + V+W +I GD ++LF M ++P++ F S
Sbjct: 482 KCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTS 541
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-D 535
+LS CS + + + I+ ++D+ + G++ +++ + M
Sbjct: 542 ILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQ 601
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFL-GFKPDRVALIAVL 580
+ W A + L+ Q E + M L +PD LI+ L
Sbjct: 602 ADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVLISNL 647
>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 754
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 182/661 (27%), Positives = 324/661 (49%), Gaps = 52/661 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGAQL 61
+++ +NSII ++ G + A +L M P QFT ++S C L G +
Sbjct: 71 KDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNI 130
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
K GLF ++ +G++ + +Y + G ++ +F ++ K +VTW +++ G+
Sbjct: 131 HGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIV-----GY 185
Query: 122 VED--------CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
V++ C+F E+ R + + L G+ +HGL +KNGF
Sbjct: 186 VQNNESGRGLKCLF---EMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFL 242
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+V +++++MY +C A + F ++ +D++SW +II ++ + L L+ M
Sbjct: 243 CFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEM 302
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ P++ ++ GK+ HA+++K +AL+ Y K +L
Sbjct: 303 QASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHL 362
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTS-IFLLIELLQLGYRPNEFTFSHVLRSS 352
A+ F +K+ W+ +ILGY++ I L E+L LG P+ + V+ S
Sbjct: 363 GTANKIFHSF-HKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSC 421
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANII 411
++G N +G + YA K+ +I + V AN +
Sbjct: 422 ------------SQVGAIN----IGRSIHCYAIKNSIIEN-------------VSVANSL 452
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y ++G T ++ + + D++SWN +I++ +G E + LF M ++YP+
Sbjct: 453 MDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNK 512
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
T + +LSAC+ L +L G +H IK+ S+ T + LIDMY KCG + +S K+FN
Sbjct: 513 VTCIIVLSACAHLASLDEGEKIHQYIKENGFESNIT-IRTALIDMYAKCGELETSRKLFN 571
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+R+VI W +IS G++G + A+E F+ ME KP+ +++L+AC H G V E
Sbjct: 572 STEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLE 631
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G LF+RM + YG+EP + HY ++DLL R G L+ AE ++ +MP P+ +W + L C
Sbjct: 632 GRHLFDRMQK-YGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSAC 690
Query: 652 Q 652
+
Sbjct: 691 K 691
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/499 (24%), Positives = 225/499 (45%), Gaps = 42/499 (8%)
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H L+I G + A L+ Y + +F+ + +D+ WN+II + + ++
Sbjct: 30 HSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDY 89
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC-DVFVGSA 282
+A + YL+M PNQ T V+++CA L G +IH K L + +GS+
Sbjct: 90 QRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSS 149
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPN 341
+ Y+KC ++E A + FSEI+ K++V+W ALI+GY + S + L E+ ++G PN
Sbjct: 150 FIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPN 209
Query: 342 EFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
T ++ + L LH L ++ G+ +E V ++++
Sbjct: 210 YKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILS---------------- 253
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
+Y+R G E + +L++ D++SW +IA + G E L
Sbjct: 254 ----------------MYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLH 297
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
LF M+A+ I PD +L + G + H I K + + N L+ MY
Sbjct: 298 LFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILK-QCCALSGITHNALLSMY 356
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
K G +G++ KIF+ ++ W+ +I G ++ + REM LG +PD +L+
Sbjct: 357 CKFGHLGTANKIFHSF-HKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLV 415
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
+V+++C G + G + ++ +E + + ++D+ + GH+ +I
Sbjct: 416 SVISSCSQVGAINIGRSIHCYAIKNSIIE-NVSVANSLMDMYGKSGHVTATWRIFHR-TL 473
Query: 638 PPNALIWRTFLEGCQRCRI 656
+ + W T + ++ I
Sbjct: 474 QRDVISWNTLISSYKQSGI 492
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 199/430 (46%), Gaps = 28/430 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
+ ++++S+ SII+ +S+ G + + L +F M P + +L +S EG
Sbjct: 271 LDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEG 330
Query: 59 AQLQASVLKNGLFCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
A +LK CA ALL +Y + G L +F KS W++++ +
Sbjct: 331 KAFHARILKQC--CALSGITHNALLSMYCKFGHLGTANKIFHSF-HKSSEDWSTMILGYS 387
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G E C+ E++ +S V VI S + G IH IKN +
Sbjct: 388 NMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVS 447
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VANSL++MY + + + ++F RDV+SWNT+I + +S +A+ L+ +M +
Sbjct: 448 VANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEK 507
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V+PN+ T + V+++CA L + G+ IH + +N E ++ + +AL+D YAKC LE +
Sbjct: 508 VYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSR 567
Query: 298 LCFSEISNKNIVSWNALILGYASK---SSPTSIFLLIELLQLGYRPNEFTF--------- 345
F+ ++++ WN +I Y S IF L+E + +PN TF
Sbjct: 568 KLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLME--ESNIKPNAQTFLSLLSACNH 625
Query: 346 -SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PR 403
HVL F +Q + G E S++ +SG + A A V ++ I P
Sbjct: 626 TGHVLEGRHLFDRMQ------KYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPD 679
Query: 404 AVVPANIIAG 413
V ++++
Sbjct: 680 GTVWGSLLSA 689
>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Brachypodium distachyon]
Length = 773
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 185/664 (27%), Positives = 317/664 (47%), Gaps = 44/664 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLN---PVEG 58
P + +NS++ ++ + AL M G P++FT S + PV G
Sbjct: 74 PCPDTFLWNSLLRSHHCASDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPV-G 132
Query: 59 AQLQASVLKNGLFCADAFVG--TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ + +K GL D V ++L+ +Y R G L + V +F++M + +V W ++VS
Sbjct: 133 TSVHSYSVKFGLLAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGC 192
Query: 117 GKHGFVEDCMFLFCELVR----SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
++G + +++R S + + +L G +HG +K G
Sbjct: 193 VRNGECGKGICYLVQMIRLAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGI 252
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
LV ++L +MY +C A +F ++ +DVVSW +IGA +A+EL+
Sbjct: 253 RDCALVVSALFSMYSKCDMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQE 312
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M + P++ V++ N GK+ HA +I+ V + ++L+ Y K +
Sbjct: 313 MEQSGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFEL 372
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEF---TFSHVL 349
++ A F + ++ SW+ ++ GY L +Q +EF S V
Sbjct: 373 VDVAGTVFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYRQMQC-RDHDEFLCDITSLVS 431
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
S +L +L R+G + Y + L+ + + N
Sbjct: 432 AISSCSRLGRL-----RLGQSVHCYSIKCLLDENSIT----------------------N 464
Query: 410 IIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+ G+Y R G + K+ + + R D+V+WN +I++ +H G + L L+ M +
Sbjct: 465 SLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQMLTEDVK 524
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P++ T ++++SAC+ L L G LH +K + SD + L+DMY KCG +G++
Sbjct: 525 PNSSTLITVISACANLAALEHGELLHSYVKNMGL-ESDVSISTALVDMYTKCGQLGTARG 583
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
IF+ M R+V+TW +IS G++G A +AL+ F EME KP+ + +A+L+AC H GL
Sbjct: 584 IFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGL 643
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
V EG +LF RM Y +EP + HY C+VDLL + G L+EAE ++ MP P+ +W T L
Sbjct: 644 VDEGRKLFIRMG-GYRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPIKPDGGVWGTLL 702
Query: 649 EGCQ 652
C+
Sbjct: 703 SACK 706
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 216/483 (44%), Gaps = 44/483 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
+ +++VVS+ +I AY R G +A+ +F M G +P + +LS S N G
Sbjct: 282 LTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGLGSSANVNRG 341
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
A +++ F + +L+ +YG+ +D +VF + ++ +W+ +V+ + K
Sbjct: 342 KAFHAVIIRRN-FGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGYCK 400
Query: 119 HGFVEDCMFLFCELV---RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
G C+ L+ ++ E +S V I S L G+ +H IK D E
Sbjct: 401 AGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLD-E 459
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRMS 234
+ NSL+ MY +C A K+F ++R DVV+WN +I + + AL LY +M
Sbjct: 460 NSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQML 519
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ V PN +T + VI++CA L G+ +H+ V LE DV + +ALVD Y KC L
Sbjct: 520 TEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQLG 579
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSL 353
A F + +++V+WN +I GY L ++ G +PN TF +L +
Sbjct: 580 TARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSACC 639
Query: 354 AFQLL-QLHCLIIRMGYENYEYVL---GSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
L+ + L IRMG E L ++ KSGL+ +A V A+ I
Sbjct: 640 HAGLVDEGRKLFIRMGGYRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPI-------- 691
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+PD W +++AC + +++ L + K ++
Sbjct: 692 -----------------------KPDGGVWGTLLSACKVHDNFEMGLRVAKKAFSSDPRN 728
Query: 470 DNY 472
D Y
Sbjct: 729 DGY 731
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 19/220 (8%)
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
ALA + L+ R A +++ Y+ +G S PD WN ++ + D
Sbjct: 36 ALASTSGLS-SRPDFAAKLVSA-YSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCASD 93
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD--TFV 509
+ L + MRA+ P +T SA ++L L +G+S+H K +++ D V
Sbjct: 94 FDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSVAV 153
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL-- 567
+ L+ MY +CGS+G +VK+F+EM +R+V+ WTA++S NG + + +M L
Sbjct: 154 SSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLAG 213
Query: 568 --GFKPDRVALIAVLTACR-----------HGGLVREGME 594
G +P+ + + L AC HG V+EG+
Sbjct: 214 DSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIR 253
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 155/502 (30%), Positives = 262/502 (52%), Gaps = 42/502 (8%)
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
F EQ+ +KN ++ + NS++ MY +C + A K+F ++ R++VSWNTII A A
Sbjct: 32 FHEQMQ-RTVKNPPEF---LENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYA 87
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
E+ F K ++ M PN +T++ + S +GK IH+ I++ L +
Sbjct: 88 ENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNAS 147
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLG 337
V +A+ + Y KC LEGA L F ++S KN V+W +++GY ++ ++ L +++ G
Sbjct: 148 VNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEG 207
Query: 338 YRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
+E+ FS VL++ + L Q+H I+++G E+ E +G+ + +
Sbjct: 208 VELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLES-EVSVGTPLVDF---------- 256
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
+V N+ A K + P+ VSW+ +I G+++
Sbjct: 257 -YVKCSNLESAT--------------------KAFEWISEPNDVSWSALITGYCQMGEFE 295
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
E L+ F+ +R + +++T+ S+ ACS L + G+ H K+ +++ M
Sbjct: 296 EALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAM- 354
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
I MY +CG + + ++F + D + + WTA+I+ G A AL+ FR M+ G +P+
Sbjct: 355 ITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNA 414
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
V IAVLTAC H GLV EG + E M+ +YGV +DHY C+VD+ R G L+EA ++I
Sbjct: 415 VTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIR 474
Query: 634 TMPFPPNALIWRTFLEGCQRCR 655
+MPF P+A+ W+ L GC R
Sbjct: 475 SMPFSPDAMSWKCLLGGCWTYR 496
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 238/506 (47%), Gaps = 47/506 (9%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
F+ ++L +Y + G L + VF++M ++LV+WN+I+S + ++G + +F ++
Sbjct: 46 FLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLEL 105
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
E S+++G + L N LE G+QIH I++G V ++ NMY +C + A
Sbjct: 106 ETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGA 165
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
E +F+ + ++ V+W I+ ++E AL L+ +M + V ++ F V+ +CAGL
Sbjct: 166 ELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGL 225
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
+ G+ IH ++K LE +V VG+ LVDFY KC NLE A F IS N VSW+ALI
Sbjct: 226 EELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALI 285
Query: 316 LGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYE 370
GY E L+ N FT++ + ++ A Q H I+
Sbjct: 286 TGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLV 345
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
Y++ +++T Y++ G + A +++ P AV IIAG Y G E +KL +
Sbjct: 346 AYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAG-YAYQGNAPEALKLFRR 404
Query: 431 LE----RPDIVSWNIVIAACAHNG------DYKEVL------------------------ 456
++ RP+ V++ V+ AC+H+G Y E +
Sbjct: 405 MQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAG 464
Query: 457 ---ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS-SLHGLIKKTEIISSDTFVCNM 512
E + +R+ PD ++ LL C NL +G + L ++ DT +
Sbjct: 465 FLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLF---QLDPEDTAGYIL 521
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNV 538
+ ++Y G + + M +RN+
Sbjct: 522 MFNLYASFGKWKEAANVRKMMAERNL 547
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 218/455 (47%), Gaps = 42/455 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
M +RN+VS+N+IISAY+ G + MF M+ +P T+ G L LNP
Sbjct: 71 MRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLR-SLLNPSGLEI 129
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ + +++GL ++A V TA+ +Y + G L+ VFE M K+ V W I+ +
Sbjct: 130 GKQIHSHAIRSGL-GSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYT 188
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ D + LF ++V V L E F V+ + ++L FG QIHG ++K G + E+
Sbjct: 189 QAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVS 248
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V LV+ Y +C+ + SA K F+ + + VSW+ +I + F +AL+ + +
Sbjct: 249 VGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRS 308
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V N T+ + +C+ L + G HA IK++L SA++ Y++C L+ A
Sbjct: 309 VDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYAT 368
Query: 298 LCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F I + + V+W A+I GYA + ++P ++ L + G RPN TF VL
Sbjct: 369 RVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVL------- 421
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIA 412
T+ + SGL+ + ++ +++ V + +
Sbjct: 422 ------------------------TACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMV 457
Query: 413 GIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
IY+R G E ++L+ + PD +SW ++ C
Sbjct: 458 DIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGC 492
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 172/405 (42%), Gaps = 34/405 (8%)
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
+ +C +++ G+ H ++ + F+ ++++ Y KC +L A F E+ +N
Sbjct: 16 LFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERN 75
Query: 308 IVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIR 366
+VSWN +I YA F + +L+L +PN T+ LRS L L+
Sbjct: 76 LVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLE------- 128
Query: 367 MGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
+G + S+A +SGL S+A ++N I+ +Y + G
Sbjct: 129 ---------IGKQIHSHAIRSGLGSNA-----SVNTA--------ISNMYVKCGWLEGAE 166
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
+ ++ + V+W ++ + L LF M + D Y F +L AC+ L
Sbjct: 167 LVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLE 226
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
L G +HG I K + S+ V L+D Y KC ++ S+ K F +++ N ++W+ALI
Sbjct: 227 ELNFGRQIHGHIVKLG-LESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALI 285
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
+ G + AL+ F + + ++ AC G + +S V
Sbjct: 286 TGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLV 345
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ ++ + R G L A ++ ++ P+A+ W + G
Sbjct: 346 AYQHGE-SAMITMYSRCGRLDYATRVFESID-DPDAVAWTAIIAG 388
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 3/189 (1%)
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M A I ++ L AC K+ +L G H +++T + + F+ N ++ MY KCG
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRT-VKNPPEFLENSVLKMYCKCG 59
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
S+ + K+F+EM +RN+++W +ISA NG + F M L KP+ I L
Sbjct: 60 SLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLR 119
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
+ + + G ++ RS G+ + ++ V+ G L+ AE + M NA
Sbjct: 120 SLLNPSGLEIGKQIHSHAIRS-GLGSNASVNTAISNMYVKCGWLEGAELVFEKMS-EKNA 177
Query: 642 LIWRTFLEG 650
+ W + G
Sbjct: 178 VAWTGIMVG 186
>gi|302809930|ref|XP_002986657.1| hypothetical protein SELMODRAFT_124576 [Selaginella moellendorffii]
gi|300145545|gb|EFJ12220.1| hypothetical protein SELMODRAFT_124576 [Selaginella moellendorffii]
Length = 662
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 169/585 (28%), Positives = 299/585 (51%), Gaps = 38/585 (6%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D +G L+ +Y + G L + V + MP + + W +I+S + G ++LF L+
Sbjct: 67 DHHLGNQLVQMYLKCGSLADARRVLDAMPARGKLAWTAIISAYVHSGDFHQAIYLFHCLL 126
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
V SFV ++ L+ ++ E +HG ++++G + EL+VAN+L++MY + +
Sbjct: 127 LEGVIPDAVSFVAMLGALALDESQELATCVHGWIVESGLEQELIVANALMSMYSKRLDLR 186
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
S K+F+ + R+VVSW +I + A +A+ L+ M ++ V PN+ TF + +
Sbjct: 187 SCWKVFERMPERNVVSWTVMIASYARLGELAEAMRLFRSMQLEGVRPNEITFSSTLVLFS 246
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
G ++ K IH +++ + V +A V A+C +L A F ++ ++ +SWN
Sbjct: 247 GSKDLRAAKLIHEQIVGSGFGAVTVVANACVGMLARCGDLAAAARVFHSMAERDEISWNV 306
Query: 314 LILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY 372
+I A + +P L +E++ G RP+ TF +L SS+ L+ Y
Sbjct: 307 MINAAAEEGEAPRVASLFMEMMAEGRRPDRATFLSIL-SSMEKNLVDPPVPPF------Y 359
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
+ VL + A+SG + ++L + A+V Y + G ++ +
Sbjct: 360 QLVLNCI----AESG-------YQSSLQVTNALV------SFYGKCGDVEGARRVFRSIS 402
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
PD++S +IAA + +++ L +F+ + + + + TF+ LLS+C L +
Sbjct: 403 SPDVISCTALIAAFSQRAQFQDALVVFRRLLHSGVRANQVTFLELLSSCRSLSD------ 456
Query: 493 LHGLIKKTEIISS----DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
GL ++I++S + V L++MY CG++ + + +N + +N++ I+A
Sbjct: 457 --GLWIHSQIVASGFQSEVDVAAALVEMYSGCGNLKQAKRAYNAVAVKNLVLCNVYIAAN 514
Query: 549 GLNGFAQRALEKFREMEFLG-FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
NG ++RAL+ F EM+ G FKPD + L AVL+AC HGGLV +G + F M Y +
Sbjct: 515 AQNGNSERALKLFWEMQQDGGFKPDGITLNAVLSACAHGGLVSQGCQYFAGMKCDYQLTC 574
Query: 608 EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
HY C++DLL R G L AEK+ T+MPFPP+ + FL C+
Sbjct: 575 NSQHYSCLIDLLGRAGRLDIAEKVTTSMPFPPDQSVRMAFLGACR 619
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 226/483 (46%), Gaps = 36/483 (7%)
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
S +DL IH ++ +G D + + N LV MY +C + A ++ + R ++W
Sbjct: 44 STTRDLATARMIHSRIVSSGLDRDHHLGNQLVQMYLKCGSLADARRVLDAMPARGKLAWT 103
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
II A S +F +A+ L+ + ++ V P+ +FV ++ + A ++ L +H ++++
Sbjct: 104 AIISAYVHSGDFHQAIYLFHCLLLEGVIPDAVSFVAMLGALALDESQELATCVHGWIVES 163
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI 331
LE ++ V +AL+ Y+K +L F + +N+VSW +I YA L
Sbjct: 164 GLEQELIVANALMSMYSKRLDLRSCWKVFERMPERNVVSWTVMIASYARLGELAEAMRLF 223
Query: 332 ELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
+QL G RPNE TFS L + L+ LI +E ++GS
Sbjct: 224 RSMQLEGVRPNEITFSSTLVLFSGSKDLRAAKLI-------HEQIVGS------------ 264
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
VT V AN G+ R G ++ + D +SWN++I A A G
Sbjct: 265 -GFGAVT--------VVANACVGMLARCGDLAAAARVFHSMAERDEISWNVMINAAAEEG 315
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS---SDT 507
+ V LF M A PD TF+S+LS+ K + L+ S S
Sbjct: 316 EAPRVASLFMEMMAEGRRPDRATFLSILSSMEKNLVDPPVPPFYQLVLNCIAESGYQSSL 375
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
V N L+ YGKCG + + ++F ++ +VI+ TALI+A Q AL FR +
Sbjct: 376 QVTNALVSFYGKCGDVEGARRVFRSISSPDVISCTALIAAFSQRAQFQDALVVFRRLLHS 435
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G + ++V + +L++CR + +G+ + ++ S G + E+D +V++ G+LK+
Sbjct: 436 GVRANQVTFLELLSSCRS---LSDGLWIHSQIVAS-GFQSEVDVAAALVEMYSGCGNLKQ 491
Query: 628 AEK 630
A++
Sbjct: 492 AKR 494
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 182/358 (50%), Gaps = 14/358 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVEGA 59
MP+RNVVS+ +I++Y+R G + +A+R+F M G P + TF L S + A
Sbjct: 195 MPERNVVSWTVMIASYARLGELAEAMRLFRSMQLEGVRPNEITFSSTLVLFSGSKDLRAA 254
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+L + F A V A +G+ R G L VF M + ++WN +++ +
Sbjct: 255 KLIHEQIVGSGFGAVTVVANACVGMLARCGDLAAAARVFHSMAERDEISWNVMINAAAEE 314
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL------EFGEQIHGLVIKNGFD 173
G LF E++ ++F+ ++ + E++L F + + + ++G+
Sbjct: 315 GEAPRVASLFMEMMAEGRRPDRATFLSILSSM--EKNLVDPPVPPFYQLVLNCIAESGYQ 372
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
L V N+LV+ Y +C + A ++F+ + DV+S +I A ++ F AL ++ R+
Sbjct: 373 SSLQVTNALVSFYGKCGDVEGARRVFRSISSPDVISCTALIAAFSQRAQFQDALVVFRRL 432
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
V NQ TF+ +++SC L + G IH++++ + + +V V +ALV+ Y+ C NL
Sbjct: 433 LHSGVRANQVTFLELLSSCRSLSD---GLWIHSQIVASGFQSEVDVAAALVEMYSGCGNL 489
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQL-GYRPNEFTFSHVL 349
+ A ++ ++ KN+V N I A +S ++ L E+ Q G++P+ T + VL
Sbjct: 490 KQAKRAYNAVAVKNLVLCNVYIAANAQNGNSERALKLFWEMQQDGGFKPDGITLNAVL 547
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 151/523 (28%), Positives = 261/523 (49%), Gaps = 44/523 (8%)
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
++S + +I +++ L QIH ++ G + + L++ I A ++F
Sbjct: 20 SDSFYASLIDSSTHKAQLR---QIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVF 76
Query: 200 KDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
D+ V WN II + + +F AL +Y +M + V P+ TF +++ +C GL +
Sbjct: 77 DDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQ 136
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS--EISNKNIVSWNALILG 317
+G+ +HA+V + E DVFV + L+ YAKC L A F + + IVSW A++
Sbjct: 137 MGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSA 196
Query: 318 YASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENY 372
YA P ++ + ++ ++ +P+ VL + Q L+ +H +++MG E
Sbjct: 197 YAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETE 256
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
+L SL T YAK G ++ A L +++
Sbjct: 257 PDLLISLNTMYAKCGQVATAKI--------------------------------LFDKMK 284
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
P+++ WN +I+ A NG K+ ++LF M + PD + S +SAC+++ +L
Sbjct: 285 SPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARW 344
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+ + +++ D F+ + LIDM+ KCGS+ + +F+ DR+V+ W+A+I GL+G
Sbjct: 345 MDEYVSRSDY-RDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY 612
A+ A+ +R ME G P+ V + +L AC H G+VREG F RM + + P+ HY
Sbjct: 404 QAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMA-DHKINPQQQHY 462
Query: 613 HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
C++DLL R GHL +A ++I MP P +W L C++ R
Sbjct: 463 ACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 505
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/528 (24%), Positives = 248/528 (46%), Gaps = 47/528 (8%)
Query: 29 FLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRH 88
FLY N G F + L+ S + + Q+ A +L GL + F+ T L+ +
Sbjct: 11 FLY-TNSGIHSDSF-YASLID-SSTHKAQLRQIHARLLVLGLQFS-GFLITKLIHASSSY 66
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI 148
G + VF+D+PR + WN+I+ + ++ +D + ++ ++ + V+ +F ++
Sbjct: 67 GDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLL 126
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI--RD 206
L+ G +H V + GF+ ++ V N L+ +Y +C + A +F+ + + R
Sbjct: 127 KACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERT 186
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
+VSW I+ A A++ +ALE++ +M V P+ V V+N+ LQ+ G+SIHA
Sbjct: 187 IVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHA 246
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPT 325
V+K LE + + +L YAKC + A + F ++ + N++ WNA+I GYA +
Sbjct: 247 SVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKD 306
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMT 381
+I L E++ RP+ + + + + L+ + + R Y + ++ +L+
Sbjct: 307 AIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALID 366
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
+AK G + A + +++RT L+R D+V W+
Sbjct: 367 MFAKCGSVECARS-------------------VFDRT------------LDR-DVVVWSA 394
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I +G +E + L++ M ++P++ TF+ LL AC+ + G + +
Sbjct: 395 MIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHK 454
Query: 502 I-ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISA 547
I + C +ID+ G+ G + + ++ M V W AL+SA
Sbjct: 455 INPQQQHYAC--IIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 186/350 (53%), Gaps = 6/350 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P V +N+II YSR + +DAL M+ M P FTF LL +C L+ ++ G
Sbjct: 79 LPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMG 138
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE--DMPRKSLVTWNSIVSIF 116
+ A V + G F AD FV L+ LY + L +VFE +P +++V+W +IVS +
Sbjct: 139 RFVHAQVFRLG-FEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAY 197
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G + + +F ++ + +V + V V++ + QDLE G IH V+K G + E
Sbjct: 198 AQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEP 257
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ SL MY +C + +A+ +F ++ +++ WN +I A++ A++L+ M
Sbjct: 258 DLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINK 317
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+ + I++CA + + + + V ++ DVF+ SAL+D +AKC ++E A
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECA 377
Query: 297 HLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTF 345
F ++++V W+A+I+GY + +I L + + G PN+ TF
Sbjct: 378 RSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTF 427
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 128/254 (50%), Gaps = 3/254 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPVE-G 58
+P+R +VS+ +I+SAY++ G +AL +F M +P +L+ L +E G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQG 241
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ ASV+K GL + +L +Y + G + +F+ M +L+ WN+++S + K
Sbjct: 242 RSIHASVMKMGLETEPDLL-ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF +D + LF E++ +V S I + LE + V ++ + ++ +
Sbjct: 301 NGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFI 360
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+++L++M+ +C + A +F RDVV W+ +I +A+ LY M D V
Sbjct: 361 SSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGV 420
Query: 239 FPNQTTFVYVINSC 252
PN TF+ ++ +C
Sbjct: 421 HPNDVTFLGLLIAC 434
>gi|255553939|ref|XP_002518010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542992|gb|EEF44528.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 824
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 158/581 (27%), Positives = 305/581 (52%), Gaps = 20/581 (3%)
Query: 38 EPTQFTFGGLLS-CDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLD-EV 94
+PT T +L C + + G ++K G+ VG AL+ +Y + G + +
Sbjct: 74 KPTSVTAAVILPVCARMRDIYVGKSFHCYMIKTGME-THTLVGNALVSMYAKCGLVSYDA 132
Query: 95 VSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH---GL 151
+ F+ + K +V+WN+I++ F ++ V+ + LF ++++++ ++ V+ L
Sbjct: 133 YAAFQSIYHKDVVSWNAIIAGFSENKMVDSALRLFFFMLKTQIKPNHATIATVLPLLASL 192
Query: 152 SNEQDLEFGEQIHGLVIKNGFDY-ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
+ + FG +IH ++++ ++ V N+L++ + + AE +F+ +E+RD++SW
Sbjct: 193 ATDTAYLFGREIHCYILRHNESLADVSVCNALLSFHLMVGRVKEAELLFRRMELRDLISW 252
Query: 211 NTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
N II A + + K+LEL+ + ++ P+ T V ++ +CA LQN G+ IH+ V+
Sbjct: 253 NAIISGFASNGEWSKSLELFQELLYLESNEPDSVTLVSILPACAQLQNLKAGREIHSYVL 312
Query: 270 KNA-LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
++ L D VG+ALV FYAKC+NL A+ F I +++++SWN+++ +A F
Sbjct: 313 RHPYLYQDTSVGNALVSFYAKCNNLVAAYHTFLMIPSRDLISWNSMLDAFAIGGRNAQFF 372
Query: 329 LLIELLQL-GYRPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEY---VLGSLM 380
L+ + G RP+ T +L ++ + HC +R G ++ +++
Sbjct: 373 KLLHWMHTEGIRPDSITILTILHFCANVLKVDKVKETHCYSLRCGLLQSDFEPTTRNAML 432
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
+YAK + A L+ R +V N + Y G Y++ + ++ D+ +WN
Sbjct: 433 DTYAKCSNVEYAFKVFQTLSDNRNLVTFNSMISGYVNCGLYDDAYMIFEKMPASDLTTWN 492
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
+++ CA N + LF+ ++A + PD T +SLL +C++ ++ L HG + +
Sbjct: 493 LMVRGCAENDCPDQAFSLFRELQARGMKPDAVTIISLLPSCAQTASVHLMKQCHGYVIRA 552
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
D + L+D+Y KCG +G + K+F+ R+++ +TA++ ++G + AL
Sbjct: 553 CF--DDAHLEGALLDLYAKCGDLGYAFKLFHSNPGRDLVVFTAMVGGYAMHGMGEEALRI 610
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
F +M LG KPD + + AVL+AC H GLV EG+++F + +
Sbjct: 611 FSDMLDLGIKPDHIVITAVLSACCHAGLVDEGLKIFHSIEK 651
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 203/416 (48%), Gaps = 49/416 (11%)
Query: 184 NMYFQCAGIWSAEKMFKDVE--IRDVVSWNTIIGALAESE-NFGKALELYLRMSV-DIVF 239
NMY +C + K+F ++ D + WN ++ A S + + + RM V + V
Sbjct: 15 NMYAKCGAFSDSNKLFGEISNCSHDPIFWNILLSGFAASPIHDAQTFSFFNRMRVANQVK 74
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE-GAHL 298
P T ++ CA +++ +GKS H +IK +E VG+ALV YAKC + A+
Sbjct: 75 PTSVTAAVILPVCARMRDIYVGKSFHCYMIKTGMETHTLVGNALVSMYAKCGLVSYDAYA 134
Query: 299 CFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLR--SSLAF 355
F I +K++VSWNA+I G++ +K +++ L +L+ +PN T + VL +SLA
Sbjct: 135 AFQSIYHKDVVSWNAIIAGFSENKMVDSALRLFFFMLKTQIKPNHATIATVLPLLASLAT 194
Query: 356 QLL-----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
++HC I+R +++LA V+ N
Sbjct: 195 DTAYLFGREIHCYILRH----------------------NESLADVSV---------CNA 223
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK---YMRAARI 467
+ + G+ E L ++E D++SWN +I+ A NG++ + LELF+ Y+ +
Sbjct: 224 LLSFHLMVGRVKEAELLFRRMELRDLISWNAIISGFASNGEWSKSLELFQELLYLESNE- 282
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD+ T VS+L AC++L NL G +H + + + DT V N L+ Y KC ++ ++
Sbjct: 283 -PDSVTLVSILPACAQLQNLKAGREIHSYVLRHPYLYQDTSVGNALVSFYAKCNNLVAAY 341
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
F + R++I+W +++ A + G + + M G +PD + ++ +L C
Sbjct: 342 HTFLMIPSRDLISWNSMLDAFAIGGRNAQFFKLLHWMHTEGIRPDSITILTILHFC 397
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 151/607 (24%), Positives = 266/607 (43%), Gaps = 92/607 (15%)
Query: 84 LYGRHGCLDEVVSVFEDMPRKS--LVTWNSIVSIFGKHGFVEDCMFLFCELVR--SEVAL 139
+Y + G + +F ++ S + WN ++S F + F F +R ++V
Sbjct: 16 MYAKCGAFSDSNKLFGEISNCSHDPIFWNILLSGFAASPIHDAQTFSFFNRMRVANQVKP 75
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI-WSAEKM 198
T + ++ + +D+ G+ H +IK G + LV N+LV+MY +C + + A
Sbjct: 76 TSVTAAVILPVCARMRDIYVGKSFHCYMIKTGMETHTLVGNALVSMYAKCGLVSYDAYAA 135
Query: 199 FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
F+ + +DVVSWN II +E++ AL L+ M + PN T V+ A L
Sbjct: 136 FQSIYHKDVVSWNAIIAGFSENKMVDSALRLFFFMLKTQIKPNHATIATVLPLLASLATD 195
Query: 259 ---ILGKSIHAKVIK-NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
+ G+ IH +++ N DV V +AL+ F+ ++ A L F + ++++SWNA+
Sbjct: 196 TAYLFGREIHCYILRHNESLADVSVCNALLSFHLMVGRVKEAELLFRRMELRDLISWNAI 255
Query: 315 ILGYASKSS-PTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMG 368
I G+AS S+ L ELL L P+ T +L + Q L ++H ++R
Sbjct: 256 ISGFASNGEWSKSLELFQELLYLESNEPDSVTLVSILPACAQLQNLKAGREIHSYVLRHP 315
Query: 369 YENYEYVLGSLMTS-YAK-SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
Y + +G+ + S YAK + L++ A+ T L IP
Sbjct: 316 YLYQDTSVGNALVSFYAKCNNLVA---AYHTFLMIPSR---------------------- 350
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
D++SWN ++ A A G + +L +M I PD+ T +++L C+ +
Sbjct: 351 --------DLISWNSMLDAFAIGGRNAQFFKLLHWMHTEGIRPDSITILTILHFCANVLK 402
Query: 487 LALGSSLHGLIKKTEIISSD--TFVCNMLIDMYGKCGSIGSSVKIFNEMTD-RNVITWTA 543
+ H + ++ SD N ++D Y KC ++ + K+F ++D RN++T+ +
Sbjct: 403 VDKVKETHCYSLRCGLLQSDFEPTTRNAMLDTYAKCSNVEYAFKVFQTLSDNRNLVTFNS 462
Query: 544 LISA--------------------------LGLNGFAQ-----RALEKFREMEFLGFKPD 572
+IS L + G A+ +A FRE++ G KPD
Sbjct: 463 MISGYVNCGLYDDAYMIFEKMPASDLTTWNLMVRGCAENDCPDQAFSLFRELQARGMKPD 522
Query: 573 RVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH---CVVDLLVRYGHLKEAE 629
V +I++L +C V + Y + D H ++DL + G L A
Sbjct: 523 AVTIISLLPSCAQTASVH-----LMKQCHGYVIRACFDDAHLEGALLDLYAKCGDLGYAF 577
Query: 630 KIITTMP 636
K+ + P
Sbjct: 578 KLFHSNP 584
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 238/507 (46%), Gaps = 53/507 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE-----G 58
++VVS+N+II+ +S V+ ALR+F +M+ +P T +L + + G
Sbjct: 142 KDVVSWNAIIAGFSENKMVDSALRLFFFMLKTQIKPNHATIATVLPLLASLATDTAYLFG 201
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ +L++ AD V ALL + G + E +F M + L++WN+I+S F
Sbjct: 202 REIHCYILRHNESLADVSVCNALLSFHLMVGRVKEAELLFRRMELRDLISWNAIISGFAS 261
Query: 119 HGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE-L 176
+G + LF EL+ E +S + V ++ + Q+L+ G +IH V+++ + Y+
Sbjct: 262 NGEWSKSLELFQELLYLESNEPDSVTLVSILPACAQLQNLKAGREIHSYVLRHPYLYQDT 321
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V N+LV+ Y +C + +A F + RD++SWN+++ A A + +L M +
Sbjct: 322 SVGNALVSFYAKCNNLVAAYHTFLMIPSRDLISWNSMLDAFAIGGRNAQFFKLLHWMHTE 381
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF---VGSALVDFYAKCDNL 293
+ P+ T + +++ CA + K H ++ L F +A++D YAKC N+
Sbjct: 382 GIRPDSITILTILHFCANVLKVDKVKETHCYSLRCGLLQSDFEPTTRNAMLDTYAKCSNV 441
Query: 294 EGAHLCFSEIS-NKNIVSWNALILGY-------------------------------ASK 321
E A F +S N+N+V++N++I GY A
Sbjct: 442 EYAFKVFQTLSDNRNLVTFNSMISGYVNCGLYDDAYMIFEKMPASDLTTWNLMVRGCAEN 501
Query: 322 SSPTSIFLLIELLQL-GYRPNEFTFSHVLRS---SLAFQLL-QLHCLIIRMGYENYEYVL 376
P F L LQ G +P+ T +L S + + L+ Q H +IR +++ ++
Sbjct: 502 DCPDQAFSLFRELQARGMKPDAVTIISLLPSCAQTASVHLMKQCHGYVIRACFDD-AHLE 560
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE---- 432
G+L+ YAK G + A + N R +V + G Y G E +++ S +
Sbjct: 561 GALLDLYAKCGDLGYAFKLFHS-NPGRDLVVFTAMVGGYAMHGMGEEALRIFSDMLDLGI 619
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELF 459
+PD + V++AC H G E L++F
Sbjct: 620 KPDHIVITAVLSACCHAGLVDEGLKIF 646
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 121/293 (41%), Gaps = 39/293 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+P R+++S+NS++ A++ G ++ +M G P T +L C ++ V+
Sbjct: 347 IPSRDLISWNSMLDAFAIGGRNAQFFKLLHWMHTEGIRPDSITILTILHFCANVLKVDKV 406
Query: 60 -QLQASVLKNGLFCADAFVGT--ALLGLYGR----------------------------- 87
+ L+ GL +D T A+L Y +
Sbjct: 407 KETHCYSLRCGLLQSDFEPTTRNAMLDTYAKCSNVEYAFKVFQTLSDNRNLVTFNSMISG 466
Query: 88 ---HGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
G D+ +FE MP L TWN +V ++ + LF EL + +
Sbjct: 467 YVNCGLYDDAYMIFEKMPASDLTTWNLMVRGCAENDCPDQAFSLFRELQARGMKPDAVTI 526
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
+ ++ + + +Q HG VI+ FD + + +L+++Y +C + A K+F
Sbjct: 527 ISLLPSCAQTASVHLMKQCHGYVIRACFD-DAHLEGALLDLYAKCGDLGYAFKLFHSNPG 585
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC--AGL 255
RD+V + ++G A +AL ++ M + P+ V+++C AGL
Sbjct: 586 RDLVVFTAMVGGYAMHGMGEEALRIFSDMLDLGIKPDHIVITAVLSACCHAGL 638
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 183/591 (30%), Positives = 288/591 (48%), Gaps = 50/591 (8%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMF-----L 128
D F G +L LY + LD VF+ M ++ +TW S++ G++ED F +
Sbjct: 101 DTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIK-----GYLEDNDFQSAFSI 155
Query: 129 FCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
++ + E + ++ S+ D GEQIH VIK+GFD + V SL+ MY +
Sbjct: 156 AGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTK 215
Query: 189 CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYV 248
AEK+F + +D+ N +I + N GKA+E++ + D P TF +
Sbjct: 216 SGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNI 275
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
I++C G GK + K + VG+A++ Y + A FS +S KN+
Sbjct: 276 ISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNL 335
Query: 309 VSWNALILGYA----SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL--HC 362
+SW ALI GY+ K + + L + L + + S+L +L C
Sbjct: 336 ISWTALISGYSRSGYGKKAVDAFLGLHDELGINFD-----------STLLTAILDCCSDC 384
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
+ +G + + +V+ K G D +N+ A+V +Y + +
Sbjct: 385 NNLELGLQIHGFVM--------KLGCACD-------VNVATALVD------LYAKCEKLQ 423
Query: 423 ETVKLLSQLERPDIVSWNIVIAA-CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
+ L I S+N ++A +GD ++ + LF +R A + PD TF LLS
Sbjct: 424 SARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLL 483
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
+ +L G S H KT ++ V N +I MY KCGSI + ++FN M R+ I+W
Sbjct: 484 ANQASLEKGRSFHAYTVKTGF-DTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISW 542
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
ALISA L+G AQ++L F EM+ GF PD ++A+L AC + GL ++G+ LF M
Sbjct: 543 NALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEP 602
Query: 602 SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
YG++P ++HY C+ DLL R G+L EA II PFP + L+WRT + C+
Sbjct: 603 KYGIKPLLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCK 653
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 150/565 (26%), Positives = 263/565 (46%), Gaps = 49/565 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNP-VEG 58
M RN +++ S+I Y + A + M G + T +L +C S + + G
Sbjct: 128 MRTRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILG 187
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ V+K+G F + FVGT+L+ +Y + G D VF+ M K + N ++ +G+
Sbjct: 188 EQIHCFVIKSG-FDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGR 246
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + +F L+ T+ +F +I + + +E G+Q+ GL K GF E V
Sbjct: 247 AGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSV 306
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI- 237
N+++ MY AE+MF + ++++SW +I + S KA++ +L + ++
Sbjct: 307 GNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELG 366
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ + T +++ C+ N LG IH V+K CDV V +ALVD YAKC+ L+ A
Sbjct: 367 INFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSAR 426
Query: 298 LCFSEISNKNIVSWNALILGY--ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
+ F +SNK I S+NA++ G+ +S + L +L G +P+ TFS +L S LA
Sbjct: 427 IVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLL-SLLAN 485
Query: 356 QL-----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
Q H ++ G++ V S+++ YAK G I DA +N +
Sbjct: 486 QASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDS------ 539
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+SWN +I+A A +G ++ L LF+ M+ PD
Sbjct: 540 --------------------------ISWNALISAYALHGQAQKSLFLFEEMKRKGFDPD 573
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVK 528
+T +++L AC+ G L L++ I + + C + D+ G+ G + ++
Sbjct: 574 EFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYAC--MADLLGRAGYLSEAMD 631
Query: 529 IFNEMT-DRNVITWTALISALGLNG 552
I ++ + W L++ L+G
Sbjct: 632 IIKRSPFPKSTLLWRTLVNVCKLHG 656
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 222/484 (45%), Gaps = 33/484 (6%)
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+D G+ +H ++K G + N+++N+Y + + A+K+F + R+ ++W ++I
Sbjct: 81 RDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLI 140
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
E +F A + M N+ T ++ +C+ + ILG+ IH VIK+ +
Sbjct: 141 KGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFD 200
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIEL 333
+VFVG++L+ Y K + A F + K+I N +IL Y + + +I + L
Sbjct: 201 ENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNL 260
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
L G+ P ++TF++++ + +G E + + G L
Sbjct: 261 LNDGFEPTDYTFTNIISTCNG-----------DLGVEEGKQLQG---------------L 294
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
AF +V N I +Y +G E ++ S + +++SW +I+ + +G K
Sbjct: 295 AFKYGFLSETSV--GNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGK 352
Query: 454 EVLELFKYMRAA-RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
+ ++ F + I D+ ++L CS NL LG +HG + K + D V
Sbjct: 353 KAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLG-CACDVNVATA 411
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISA-LGLNGFAQRALEKFREMEFLGFKP 571
L+D+Y KC + S+ +F+ ++++ + ++ A+++ L +G + + F ++ G KP
Sbjct: 412 LVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKP 471
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D V +L+ + + +G F G + + + V+ + + G +++A ++
Sbjct: 472 DMVTFSRLLSLLANQASLEKGRS-FHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQM 530
Query: 632 ITTM 635
M
Sbjct: 531 FNIM 534
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 170/348 (48%), Gaps = 39/348 (11%)
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
G ++ +LG+++H+ ++K + D F G+ +++ Y K + L+ A F + +N ++W +
Sbjct: 79 GSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTS 138
Query: 314 LILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLR--SSLAFQLL--QLHCLIIRMG 368
LI GY + S F + ++ + G NE T + +L+ SS ++L Q+HC +I+ G
Sbjct: 139 LIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSG 198
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
++ +V SL+ Y KSG ++ K+
Sbjct: 199 FDENVFVGTSLIAMYTKSGF--------------------------------FDVAEKVF 226
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
+ DI N +I G+ + +E+FK + P +YTF +++S C+ +
Sbjct: 227 DSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVE 286
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G L GL K + S+T V N +I MYG G + ++F+ M+++N+I+WTALIS
Sbjct: 287 EGKQLQGLAFKYGFL-SETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGY 345
Query: 549 GLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+G+ ++A++ F + + LG D L A+L C + G+++
Sbjct: 346 SRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQI 393
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 168/593 (28%), Positives = 282/593 (47%), Gaps = 46/593 (7%)
Query: 73 ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL 132
A F+ LL Y R G + ++MPR++ V++N ++ + + G +
Sbjct: 41 ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
R+ V + S+ + S L G +H L I +G + V+NSLV+MY +C +
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
A ++F E RD VSWN+++ + + + ++ M + N VI C
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220
Query: 253 AGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+G + + +++H VIK L+ DVF+ SA++D YAK L A F + N+V
Sbjct: 221 SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVM 280
Query: 311 WNALILGY-------ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQL---LQ 359
+N +I G+ + + ++ L E+ G +P EFTFS VLR+ +LA L Q
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+H +I+ ++ +++ +L+ Y SG + D
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGF-------------------------- 374
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+ + DIV+W +++ C N +++ L LF A + PD +T S+++
Sbjct: 375 ------RCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMN 428
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
AC+ L G + K+ T + N + MY + G + ++ + F EM +V+
Sbjct: 429 ACASLAVARAGEQIQCFATKSGF-DRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVV 487
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W+A+IS +G A+ AL F EM P+ + + VLTAC HGGLV EG+ +E M
Sbjct: 488 SWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETM 547
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
N+ YG+ P + H CVVDLL R G L +AE I+ F + +IWR+ L C+
Sbjct: 548 NKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCR 600
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/563 (26%), Positives = 258/563 (45%), Gaps = 49/563 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
MP RN VSFN +I AYSR G +L G + +F++ L +C + G
Sbjct: 69 MPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAG 128
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A + +GL + FV +L+ +Y + G + E VF+ + V+WNS+VS + +
Sbjct: 129 RAVHALAILDGL-SSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVR 187
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD--LEFGEQIHGLVIKNGFDYEL 176
G E+ + +F + R + L + VI S D ++ E +HG VIK G D ++
Sbjct: 188 AGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDV 247
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN-FGK-----ALELY 230
+ +++++MY + + A +F+ V+ +VV +NT+I +E GK AL LY
Sbjct: 248 FLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLY 307
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
+ + P + TF V+ +C GK IH +VIK + D F+GSAL+D Y
Sbjct: 308 SEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNS 367
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL 349
+E CF +IV+W A++ G ++ L E L G +P+ FT S V+
Sbjct: 368 GCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVM 427
Query: 350 RSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+ + + Q+ C + G++ +
Sbjct: 428 NACASLAVARAGEQIQCFATKSGFDRF--------------------------------T 455
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
V N +Y R+G + + ++E D+VSW+ VI+ A +G ++ L F M A
Sbjct: 456 VMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDA 515
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
++ P+ TF+ +L+ACS + G + + K +S C ++D+ G+ G +
Sbjct: 516 KVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLAD 575
Query: 526 SVK-IFNEMTDRNVITWTALISA 547
+ I N + + + W +L+++
Sbjct: 576 AEAFISNGIFHADPVIWRSLLAS 598
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/507 (23%), Positives = 221/507 (43%), Gaps = 49/507 (9%)
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L + N+L+ Y + G A ++ ++ R+ VS+N +I A + +LE R
Sbjct: 43 LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V ++ ++ + +C+ + G+++HA I + L VFV ++LV Y+KC +
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVL----- 349
A F ++ VSWN+L+ GY + + + +++ G N F V+
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222
Query: 350 RSSLAFQLLQ-LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
R + + +H +I+ G ++ +++ +++ YAK G + +A A ++ P V+
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+IAG + RT ETV + + E L L+ +++ +
Sbjct: 283 TMIAG-FCRT----ETV-----------IGKEVA----------SEALTLYSEVQSRGMQ 316
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P +TF S+L AC+ L G +HG + K D F+ + LID+Y G + +
Sbjct: 317 PTEFTFSSVLRACNLAGYLEFGKQIHGQVIKY-TFQEDDFIGSALIDLYFNSGCMEDGFR 375
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
F +++TWTA++S N ++AL F E G KPD + +V+ AC +
Sbjct: 376 CFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAV 435
Query: 589 VREGMELFERMNRSYGVEPEMDHY----HCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
R G ++ + + + D + + V + R G + A + M + + W
Sbjct: 436 ARAGEQI-----QCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEME-SHDVVSW 489
Query: 645 RTFL-----EGCQRCRIAKYDTLNSTK 666
+ GC R + +D + K
Sbjct: 490 SAVISCHAQHGCARDALHFFDEMVDAK 516
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 177/596 (29%), Positives = 296/596 (49%), Gaps = 38/596 (6%)
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
A+ A +++NG + D T L G ++F +P+ + +N ++ F
Sbjct: 25 AETHAQLIRNG-YQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFS- 82
Query: 119 HGFVEDC--MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
F D + + L+++ L+ +F +S D G +H + +GFD L
Sbjct: 83 --FSPDASSISFYTHLLKN-TTLSPDNFTYAF-AISASPDDNLGMCLHAHAVVDGFDSNL 138
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VA++LV++Y + + + A K+F + RD V WNT+I L + + +++++ M
Sbjct: 139 FVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQ 198
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V + TT V+ + A +Q +G I +K D +V + L+ ++KC++++ A
Sbjct: 199 GVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTA 258
Query: 297 HLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
L F I ++VS+NALI G++ + + ++ ELL G R + T ++ S F
Sbjct: 259 RLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPF 318
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L L C I G+ KSG I + TAL IY
Sbjct: 319 GHLHLACCI--QGF-------------CVKSGTILQP-SVSTALTT------------IY 350
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+R + + +L + + +WN +I+ A +G + + LF+ M P+ T
Sbjct: 351 SRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTIT 410
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+LSAC++L L+ G S+H LIK ++ + + +V LIDMY KCG+I + ++F+ ++
Sbjct: 411 SILSACAQLGALSFGKSVHQLIK-SKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSE 469
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+N +TW +I GL+G+ AL+ F EM LGF+P V ++VL AC H GLVREG E+
Sbjct: 470 KNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEI 529
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
F M Y +EP +HY C+VD+L R G L++A + I MP P +W T L C
Sbjct: 530 FHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGAC 585
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 143/302 (47%), Gaps = 14/302 (4%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQL 61
PD +VS+N++IS +S G E A++ F ++ G + T GL+ S P L
Sbjct: 268 PD--LVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSS--PFGHLHL 323
Query: 62 ----QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q +K+G + V TAL +Y R +D +F++ K++ WN+++S +
Sbjct: 324 ACCIQGFCVKSGTILQPS-VSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYA 382
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G E + LF E++ +E + ++ + L FG+ +H L+ + +
Sbjct: 383 QSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIY 442
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V+ +L++MY +C I A ++F ++ V+WNT+I +AL+L+ M
Sbjct: 443 VSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLG 502
Query: 238 VFPNQTTFVYVINSC--AGLQNSILGKSI-HAKVIKNALECDVFVGSALVDFYAKCDNLE 294
P+ TF+ V+ +C AGL G I HA V K +E + +VD + LE
Sbjct: 503 FQPSSVTFLSVLYACSHAGLVRE--GDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLE 560
Query: 295 GA 296
A
Sbjct: 561 KA 562
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 112/219 (51%), Gaps = 7/219 (3%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQL 61
++ V ++N++IS Y++ G E A+ +F M+ F P T +LS C L + +
Sbjct: 368 EKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKS 427
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
++K+ + +V TAL+ +Y + G + E +F+ K+ VTWN+++ +G HG+
Sbjct: 428 VHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGY 487
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI-HGLVIKNGFDYELLVAN 180
++ + LF E++ + +F+ V++ S+ + G++I H +V N + E L +
Sbjct: 488 GDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMV--NKYRIEPLAEH 545
Query: 181 --SLVNMYFQCAGIWSAEKMFKDVEIRD-VVSWNTIIGA 216
+V++ + + A + + + + W T++GA
Sbjct: 546 YACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGA 584
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 175/570 (30%), Positives = 276/570 (48%), Gaps = 35/570 (6%)
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI 148
G L VF+ +P +N+++ + G + L+ ++ V + +F V+
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
S DL G IH G +L V+ +L+++Y +CA A +F + +RDVV
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 209 SWNTIIGALAESENFGKALELYLRMS-VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
+WN ++ A + A+ L M + PN +T V ++ A G S+HA
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 268 VIKNAL---ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
++ L E V +G+AL+D YAKC +L A F ++ +N V+W+ALI G+
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286
Query: 325 TSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLI-IRMGYENYEYVLGSLMTS 382
T F L ++L G + +S+A L L +RMG + L
Sbjct: 287 TEAFNLFKDMLVEG-------MCFLSATSVASALRVCASLADLRMGTQ--------LHAL 331
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
AKSG+ +D A N + +Y + G NE L ++ D +S+ +
Sbjct: 332 LAKSGIHADLTA-------------GNSLLSMYAKAGLINEATMLFDEIAIKDTISYGAL 378
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
++ NG +E +FK M+A + PD T VSL+ ACS L L G HG +
Sbjct: 379 LSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVI-IRG 437
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
++ +T +CN LIDMY KCG I S ++F++M R++++W +I+ G++G + A F
Sbjct: 438 LALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFL 497
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
M+ GF+PD V I ++ AC H GLV EG F+ M YG+ P M+HY C+VDLL R
Sbjct: 498 SMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARG 557
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G L EA + I +MP + +W L C+
Sbjct: 558 GFLDEAYQFIQSMPLKADVRVWGALLGACR 587
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/558 (23%), Positives = 256/558 (45%), Gaps = 42/558 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
+P + ++N++I AYS G A+ ++ M+ P ++TF +L +C +L + G
Sbjct: 59 IPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAG 118
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A GL D FV TAL+ LY R +VF MP + +V WN++++ +
Sbjct: 119 RTIHAHAAAVGLH-TDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYAN 177
Query: 119 HGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY--- 174
HG + ++ R + S+ V ++ L+ L G +H ++ D
Sbjct: 178 HGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEE 237
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++L+ +L++MY +C + A ++F + +R+ V+W+ +IG + +A L+ M
Sbjct: 238 QVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDML 297
Query: 235 VD-IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
V+ + F + T+ + CA L + +G +HA + K+ + D+ G++L+ YAK +
Sbjct: 298 VEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLI 357
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSS 352
A + F EI+ K+ +S+ AL+ GY FL+ + +Q +P+ T ++ +
Sbjct: 358 NEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPAC 417
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
LQ G S + L + ++ N +
Sbjct: 418 SHLAALQ--------------------------HGRCSHGSVIIRGLALETSIC--NSLI 449
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G+ + + ++ ++ DIVSWN +IA +G KE LF M+ PD+
Sbjct: 450 DMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDV 509
Query: 473 TFVSLLSACSKLCNLALGSS-LHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIF 530
TF+ L++ACS + G + K I+ + ++C ++D+ + G + + +
Sbjct: 510 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYIC--MVDLLARGGFLDEAYQFI 567
Query: 531 NEMTDR-NVITWTALISA 547
M + +V W AL+ A
Sbjct: 568 QSMPLKADVRVWGALLGA 585
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 114/241 (47%), Gaps = 8/241 (3%)
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
GQ ++ ++ PD ++N +I A + G + ++L++ M R+ P+ YTF +L
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
ACS L +L G ++H + +D FV LID+Y +C G + +F +M R+V
Sbjct: 107 KACSALADLCAGRTIHAHAAAVG-LHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDV 165
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFL-GFKPDRVALIAVLTACRHGGLVREGMELFE 597
+ W A+++ +G A+ +M+ G +P+ L+++L G + +G +
Sbjct: 166 VAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHA 225
Query: 598 RMNRSY--GVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG---CQ 652
R+Y E ++ ++D+ + HL A ++ M N + W + G C
Sbjct: 226 YCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTV-RNEVTWSALIGGFVLCD 284
Query: 653 R 653
R
Sbjct: 285 R 285
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
++ +S+ +++S Y + G E+A +F M +P T L+ +C L ++ G
Sbjct: 370 KDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCS 429
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
SV+ GL + + +L+ +Y + G +D VF+ MP + +V+WN++++ +G HG
Sbjct: 430 HGSVIIRGL-ALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGL 488
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVI-----HGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ LF + + +F+ +I GL E F H I ++ +
Sbjct: 489 GKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI 548
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESEN 222
+ + L F + A + + + ++ DV W ++GA +N
Sbjct: 549 CMVDLLARGGF----LDEAYQFIQSMPLKADVRVWGALLGACRIHKN 591
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 249/466 (53%), Gaps = 7/466 (1%)
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
I A +F+ + + WN +I + S+ +A+ +Y M + N T++++ +
Sbjct: 27 ILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKA 86
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
CA + + G +IHA+V+K E ++V +AL++ Y C +L A F E+ +++VSW
Sbjct: 87 CARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSW 146
Query: 312 NALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYE 370
N+L+ GY + + E +++ G + + T V+ + + + ++ E
Sbjct: 147 NSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEE 206
Query: 371 NYE----YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
N Y+ +L+ Y + GL+ A + R +V N + Y + G +
Sbjct: 207 NNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQW-RNLVSWNAMIMGYGKAGNLVAARE 265
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
L + + D++SW +I + + G + E L LFK M +++ PD T S+LSAC+ +
Sbjct: 266 LFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGS 325
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L +G + H I+K ++ +D +V N LIDMY KCG + ++++F EM ++ ++WT++IS
Sbjct: 326 LDVGEAAHDYIQKYDV-KADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTSIIS 384
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
L +NGFA AL+ F M +P A + +L AC H GLV +G+E FE M + YG++
Sbjct: 385 GLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEKVYGLK 444
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
PEM HY CVVDLL R G+L+ A + I MP P+ +IWR L Q
Sbjct: 445 PEMKHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQ 490
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 234/481 (48%), Gaps = 14/481 (2%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
++F+ + R +L WN ++ + + + ++ + R + +++ + +
Sbjct: 32 NLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKACARVP 91
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
D+ G IH V+K GF+ L V+N+L+NMY C + A+K+F ++ RD+VSWN+++
Sbjct: 92 DVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSLVC 151
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+ + F + L ++ M V V + T V V+ +C L + ++ + +N +E
Sbjct: 152 GYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEI 211
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
DV++G+ L+D Y + + A F ++ +N+VSWNA+I+GY ++ EL
Sbjct: 212 DVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAG---NLVAARELFD 268
Query: 336 LGYRPNEFTFSHVLRS-SLAFQL---LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS- 390
+ + ++++++ S S A Q L+L ++ + E + S++++ A +G +
Sbjct: 269 AMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDV 328
Query: 391 --DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
A ++ ++ + N + +Y + G + +++ ++ + D VSW +I+ A
Sbjct: 329 GEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTSIISGLAV 388
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
NG L+ F M + P + FV +L AC+ + G ++K + +
Sbjct: 389 NGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEKVYGLKPEMK 448
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISALGLNG---FAQRALEKFREM 564
++D+ + G++ + + EM +V+ W L+SA ++G A+ A +K E+
Sbjct: 449 HYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHGNIPLAEIATKKLLEL 508
Query: 565 E 565
+
Sbjct: 509 D 509
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 222/496 (44%), Gaps = 78/496 (15%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVL 66
+N +I +S +A+RM+ M +G T+ L +C + V G+ + A VL
Sbjct: 45 WNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKACARVPDVSCGSTIHARVL 104
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K G F + +V AL+ +YG G L VF++MP + LV+WNS+V +G+ + +
Sbjct: 105 KLG-FESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSLVCGYGQCKRFREVL 163
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM- 185
+F + + V + V V+ ++ + + + + +N + ++ + N+L++M
Sbjct: 164 GVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMY 223
Query: 186 ------------------------------YFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
Y + + +A ++F + RDV+SW +I
Sbjct: 224 GRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMIT 283
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+ +++ F +AL L+ M V P++ T V+++CA + +G++ H + K ++
Sbjct: 284 SYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYIQKYDVKA 343
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELL 334
D++VG+AL+D Y KC +E A F E+ K+ VSW ++I G A + +++ +L
Sbjct: 344 DIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTSIISGLAVNGFADSALDYFSRML 403
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
+ +P+ F +L L C A +GL+ L
Sbjct: 404 REVVQPSHGAFVGIL----------LAC---------------------AHAGLVDKGLE 432
Query: 395 FVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHN 449
+ ++ + P + + +R+G + + ++ PD+V W I+++A +
Sbjct: 433 YFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVH 492
Query: 450 GDY-------KEVLEL 458
G+ K++LEL
Sbjct: 493 GNIPLAEIATKKLLEL 508
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 45/307 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGL-LSCDSLNPVEGA 59
MP+R++VS+NS++ Y +C + L +F M G + T + L+C SL A
Sbjct: 138 MPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVA 197
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ D ++G L+ +YGR G + VF+ M ++LV+WN+++ +GK
Sbjct: 198 DAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKA 257
Query: 120 G--------------------------------FVEDCMFLFCELVRSEVALTESSFVGV 147
G F E + LF E++ S+V E + V
Sbjct: 258 GNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTE-ALRLFKEMMESKVKPDEITVASV 316
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
+ ++ L+ GE H + K ++ V N+L++MY +C + A ++FK++ +D
Sbjct: 317 LSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDS 376
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
VSW +II LA + AL+ + RM ++V P+ FV ++ +CA HA
Sbjct: 377 VSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACA-----------HAG 425
Query: 268 VIKNALE 274
++ LE
Sbjct: 426 LVDKGLE 432
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 130/260 (50%), Gaps = 10/260 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M R+V+S+ ++I++YS+ G +ALR+F M+ +P + T +LS C ++
Sbjct: 270 MSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVG 329
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ ++ AD +VG AL+ +Y + G +++ + VF++M +K V+W SI+S +
Sbjct: 330 EAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTSIISGLAVN 389
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVI----HGLSNEQDLEFGEQIHGLVIKNGFDYE 175
GF + + F ++R V + +FVG++ H ++ LE+ E + + G E
Sbjct: 390 GFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEKVY---GLKPE 446
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRMS 234
+ +V++ + + A + K++ + DVV W ++ A N A E+ +
Sbjct: 447 MKHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHGNIPLA-EIATKKL 505
Query: 235 VDIVFPNQTTFVYVINSCAG 254
+++ N +V N+ AG
Sbjct: 506 LELDPSNSGNYVLSSNTYAG 525
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 187/657 (28%), Positives = 330/657 (50%), Gaps = 41/657 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV---E 57
MP ++ +++ +I A+ + G E AL +F M G P F +L S +P E
Sbjct: 59 MPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEE 118
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ VL+ +D +V T LL +YG+ +++ VF+ + K +V WN++++ +
Sbjct: 119 GRRIHG-VLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYA 177
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY--E 175
+ E + +F ++ V +F+GV+ S +DLE + + V + D+ +
Sbjct: 178 QQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHD 237
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
A +LVN Y C + A + F + +++ +I + E + +ALEL+ M +
Sbjct: 238 SSFATALVNFYGSCGDLEQAFRAFSRHRL-ELILATAMITQYTQRERWDEALELFKVMLL 296
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ V ++ + V+N+C+G + G+ IH + + + V G+AL++ Y KC +LE
Sbjct: 297 EGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEE 356
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
A F + +++++SWN +I + S L+ L+QL G + ++ +F + L A
Sbjct: 357 AVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAA 416
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSY-AKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ L G ++ S+ +SG+ +D V+ N I
Sbjct: 417 SEAL----------------AKGRMIHSWIVESGIKAD-------------VMLDNAILD 447
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK-EVLELFKYMRAARIYPDNY 472
+Y ++ ++ ++ D VSWN +I A A E L LF+ M+ PD
Sbjct: 448 MYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVI 507
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+FV+ LSAC+ +LA G LH I++T + S+ T V N +++MY K GS+ + K+F +
Sbjct: 508 SFVAALSACAAQASLAEGKLLHDRIRETGLESNMT-VANAVLNMYAKSGSLVLARKMFGK 566
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
M +VI+W +ISA +G A + L FR M G P+ V ++V++AC HGGLV++G
Sbjct: 567 MPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDG 626
Query: 593 MELFERMNRSY-GVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
++LF + + + P +HY+C+VDL+ R G L AEK I P P+ +I T L
Sbjct: 627 VQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTML 683
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 285/592 (48%), Gaps = 38/592 (6%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ A + K+ + F+G L+ +Y G L + + F+ MP + +TW ++ G
Sbjct: 17 GKEVHARICKSAMDRG-PFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHG 75
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD-LEFGEQIHGLVIKNGFDYEL 176
+ G E + LF + VA +FV V+ S + + LE G +IHG++ + +
Sbjct: 76 QIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDH 135
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V+ +L++MY +C+ + A K+F + + VV WN +I A A+ ++ +A++++ M ++
Sbjct: 136 YVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLE 195
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE--CDVFVGSALVDFYAKCDNLE 294
V + TF+ V+++C+ L++ + K + V + + D +ALV+FY C +LE
Sbjct: 196 GVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLE 255
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSL 353
A FS + I++ A+I Y + L +++ L G + + VL +
Sbjct: 256 QAFRAFSRHRLELILA-TAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNA-- 312
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
C R G E + G F+ + R V N +
Sbjct: 313 --------CSGPR-GLEEGRMIHG-----------------FMREIRFDRHVNAGNALIN 346
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y + G E V++ ++ D++SWN +IAA + + E L L M+ + D +
Sbjct: 347 MYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKIS 406
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FV+ L C+ LA G +H I ++ I +D + N ++DMYG C S + ++F M
Sbjct: 407 FVNALPLCAASEALAKGRMIHSWIVESG-IKADVMLDNAILDMYGSCKSTDDASRVFRAM 465
Query: 534 TDRNVITWTALISALGLNG-FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
R+ ++W A+I+A + AL F++M+ GF PD ++ +A L+AC + EG
Sbjct: 466 KARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEG 525
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
L +R+ R G+E M + V+++ + G L A K+ MP P+ + W
Sbjct: 526 KLLHDRI-RETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPL-PDVISW 575
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/466 (33%), Positives = 247/466 (53%), Gaps = 35/466 (7%)
Query: 193 WS-AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
W+ A K+F + R++V+W +I A+ A++L+L M + P++ T+ V+++
Sbjct: 1 WAPAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 60
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC---DNLEGAHLCFSEISNKNI 308
C L LGK +H++VI+ L DV VG +LVD YAKC +++ + F ++ N+
Sbjct: 61 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 120
Query: 309 VSWNALILGYAS--KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIR 366
+SW A+I YA + +I L +++ RPN F+FS VL++
Sbjct: 121 MSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKA--------------- 165
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
G+L Y + S + L I N + +Y R+G+ + K
Sbjct: 166 ---------CGNLSDPYTGEQVYS----YAVKLGIASVNCVGNSLISMYARSGRMEDARK 212
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
L ++VS+N ++ A N +E LF + I +TF SLLS + +
Sbjct: 213 AFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGA 272
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
+ G +HG + K S+ +CN LI MY +CG+I ++ ++FNEM DRNVI+WT++I+
Sbjct: 273 MGKGEQIHGRLLKGGY-KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 331
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
+GFA RALE F +M G KP+ + +AVL+AC H G++ EG + F M + +G+
Sbjct: 332 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIV 391
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
P M+HY C+VDLL R G L EA + I +MP +AL+WRT L C+
Sbjct: 392 PRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACR 437
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 252/485 (51%), Gaps = 30/485 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+RN+V++ +I+ +++ G DA+ +FL M G+ P +FT+ +LS C L + G
Sbjct: 11 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 70
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGR---HGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
QL + V++ GL D VG +L+ +Y + G +D+ VFE MP ++++W +I++
Sbjct: 71 KQLHSRVIRLGL-ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA 129
Query: 116 FGKHGFVE-DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + G + + + LFC+++ + SF V+ N D GEQ++ +K G
Sbjct: 130 YAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIAS 189
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V NSL++MY + + A K F + +++VS+N I+ A++ +A L+ ++
Sbjct: 190 VNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIA 249
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ + TF +++ A + G+ IH +++K + + + +AL+ Y++C N+E
Sbjct: 250 DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIE 309
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F+E+ ++N++SW ++I G+A T ++ + ++L+ G +PNE T+ VL +
Sbjct: 310 AAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSAC- 368
Query: 354 AFQLLQLHCLIIRMGYENY-----EYVLGSLMTSYA-------KSGLISDALAFVTALNI 401
H +I G +++ E+ + M YA +SGL+ +A+ F+ ++ +
Sbjct: 369 ------SHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 422
Query: 402 PRAVVPANIIAG---IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
+ + G ++ T +++ + E D ++ ++ A G +K+V+++
Sbjct: 423 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 482
Query: 459 FKYMR 463
K M+
Sbjct: 483 RKSMK 487
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 230/489 (47%), Gaps = 49/489 (10%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF+ MP ++LVTW +++ F + G D + LF ++ S ++ V+ +
Sbjct: 7 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 66
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE---KMFKDVEIRDVVSWNTI 213
L G+Q+H VI+ G ++ V SLV+MY +CA S + K+F+ + +V+SW I
Sbjct: 67 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 126
Query: 214 IGALAESENFGK-ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
I A A+S K A+EL+ +M + PN +F V+ +C L + G+ +++ +K
Sbjct: 127 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI- 331
+ VG++L+ YA+ +E A F + KN+VS+NA++ GYA FLL
Sbjct: 187 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 246
Query: 332 ELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
E+ G + FTF+ +L + + + Q+H +++ GY++ + + +L++ Y++ G
Sbjct: 247 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 306
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV----KLLSQLERPDIVSWNIVI 443
I A + + ++I G + + G + K+L +P+ +++ V+
Sbjct: 307 NIEAAFQVFNEMEDRNVISWTSMITG-FAKHGFATRALEMFHKMLETGTKPNEITYVAVL 365
Query: 444 AACAH-----------NGDYKE----------------------VLELFKYMRAARIYPD 470
+AC+H N YKE ++E +++ + + D
Sbjct: 366 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 425
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ +LL AC N LG +I + E ++ +L +++ G VKI
Sbjct: 426 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYI--LLSNLHASAGQWKDVVKIR 483
Query: 531 NEMTDRNVI 539
M +RN+I
Sbjct: 484 KSMKERNLI 492
>gi|357521772|ref|XP_003612377.1| Selenium binding protein-like protein [Medicago truncatula]
gi|355513712|gb|AES95335.1| Selenium binding protein-like protein [Medicago truncatula]
Length = 611
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/461 (34%), Positives = 246/461 (53%), Gaps = 25/461 (5%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A +F+ + +V +N++I A+S N +L LY +M + P+ TF +V+ +C+
Sbjct: 60 ANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSF 119
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
+ + + GK +H+ ++K+ E +V+V + L++ Y +C N+E F +I N+V+W L
Sbjct: 120 IYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCL 179
Query: 315 ILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE 373
I GY P ++ + E+ + G NE T + L + C + G +E
Sbjct: 180 INGYVINDQPREALEVFKEMGRWGVEANEVTMVNAL-------IACARCRDVDTGRWVHE 232
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
V K+G D F + N V+ A I +Y + G N +L +++
Sbjct: 233 RV--------CKAGY--DPFVFASNSN----VILATAIVEMYAKCGWLNVARELFNKMPE 278
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
+IV+WN +I A Y E L LF YM A PD TF+S+LS C++ C LALG ++
Sbjct: 279 RNIVAWNCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETV 338
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE-MTDRNVITWTALISALGLNG 552
H + K+ + + D + L+DMY K G +GS+ KIFN + ++V+ WT++I+AL ++G
Sbjct: 339 HAYLLKSNM-AKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHG 397
Query: 553 FAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
AL F+ M E PD + I VL AC H GLV E + F M +SYG+ PE +H
Sbjct: 398 HGNEALSLFQIMQEDSSLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKEH 457
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y C+VDLL R GH +EAEK++ TM PN IW L GCQ
Sbjct: 458 YSCMVDLLSRAGHFREAEKLMETMSIRPNIAIWGALLNGCQ 498
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 215/459 (46%), Gaps = 49/459 (10%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEGAQLQ 62
NV FNS+I Y++ +L ++ M+ G+ P FTF +L S + V G +
Sbjct: 71 NVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSFIYDQVSGKCVH 130
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+ +LK+G F A+ +V T LL +Y ++ + VF+ +P+ ++V W +++ + +
Sbjct: 131 SCILKSG-FEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVINDQP 189
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD-------YE 175
+ + +F E+ R V E + V + + +D++ G +H V K G+D
Sbjct: 190 REALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPFVFASNSN 249
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+++A ++V MY +C + A ++F + R++V+WN +I A + E + +AL L+ M
Sbjct: 250 VILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEALGLFFYMLA 309
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ P++ TF+ V++ CA LG+++HA ++K+ + D+ + +AL+D YAK L
Sbjct: 310 NGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALATALLDMYAKNGELGS 369
Query: 296 AHLCF-SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR--PNEFTFSHVLRSS 352
A F + + K++V W ++I A L +++Q P+ T+ VL +
Sbjct: 370 AQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVPDHITYIGVLFAC 429
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA---- 408
+ GL+ +A + ++P
Sbjct: 430 -------------------------------SHVGLVEEAQKQFNLMTKSYGILPEKEHY 458
Query: 409 NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
+ + + +R G + E KL+ + RP+I W ++ C
Sbjct: 459 SCMVDLLSRAGHFREAEKLMETMSIRPNIAIWGALLNGC 497
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 218/462 (47%), Gaps = 39/462 (8%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F + ++ +NS++ + K + L+ +++++ + +F V+ S D
Sbjct: 63 LFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSFIYD 122
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
G+ +H ++K+GF+ + VA L+NMY +C + S K+F + +VV+W +I
Sbjct: 123 QVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLING 182
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN----- 271
++ +ALE++ M V N+ T V + +CA ++ G+ +H +V K
Sbjct: 183 YVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPF 242
Query: 272 --ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIF 328
A +V + +A+V+ YAKC L A F+++ +NIV+WN +I Y + ++
Sbjct: 243 VFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEALG 302
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
L +L G+ P++ TF VL + C ++ +G + Y+L S
Sbjct: 303 LFFYMLANGFCPDKATFLSVL------SVCARRC-VLALGETVHAYLLKS---------- 345
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ-LERPDIVSWNIVIAACA 447
N+ + + A + +Y + G+ K+ + LE+ D+V W +I A A
Sbjct: 346 -----------NMAKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALA 394
Query: 448 HNGDYKEVLELFKYMRA-ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
+G E L LF+ M+ + + PD+ T++ +L ACS + + L+ K+ I +
Sbjct: 395 IHGHGNEALSLFQIMQEDSSLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPE 454
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISA 547
+ ++D+ + G + K+ M+ R N+ W AL++
Sbjct: 455 KEHYSCMVDLLSRAGHFREAEKLMETMSIRPNIAIWGALLNG 496
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 128/271 (47%), Gaps = 13/271 (4%)
Query: 390 SDALAFVTALNIPRAVVPANIIAG--IYNRTGQYNETVKLL-SQLERPDIVSWNIVIAAC 446
S AL T I ++P + + + + +Y LL Q+ P++ +N +I
Sbjct: 23 SHALILTTPTTINTKIIPLSKLIDFCVDSHFDEYFNYANLLFRQIHSPNVYIFNSMIKGY 82
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
A + + L L+K M PD++TF +L ACS + + G +H I K+ ++
Sbjct: 83 AKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSFIYDQVSGKCVHSCILKSG-FEAN 141
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
+V L++MY +C ++ S +K+F+++ NV+ WT LI+ +N + ALE F+EM
Sbjct: 142 VYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVINDQPREALEVFKEMGR 201
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP-------EMDHYHCVVDLL 619
G + + V ++ L AC V G + ER+ ++ G +P + +V++
Sbjct: 202 WGVEANEVTMVNALIACARCRDVDTGRWVHERVCKA-GYDPFVFASNSNVILATAIVEMY 260
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ G L A ++ MP N + W +
Sbjct: 261 AKCGWLNVARELFNKMP-ERNIVAWNCMINA 290
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 128/241 (53%), Gaps = 9/241 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
MP+RN+V++N +I+AY++ +AL +F YM+ GF P + TF +LS + V G
Sbjct: 276 MPERNIVAWNCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALG 335
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFED-MPRKSLVTWNSIVSIFG 117
+ A +LK+ + D + TALL +Y ++G L +F + + +K +V W S+++
Sbjct: 336 ETVHAYLLKSNM-AKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALA 394
Query: 118 KHGFVEDCMFLFCELVRSEVALTES--SFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDY 174
HG + + LF ++++ + +L +++GV+ S+ +E ++ L+ K+ G
Sbjct: 395 IHGHGNEALSLF-QIMQEDSSLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILP 453
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRM 233
E + +V++ + AEK+ + + IR ++ W ++ EN A ++ +R+
Sbjct: 454 EKEHYSCMVDLLSRAGHFREAEKLMETMSIRPNIAIWGALLNGCQIHENIPVASQVKVRL 513
Query: 234 S 234
+
Sbjct: 514 A 514
>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 196/658 (29%), Positives = 327/658 (49%), Gaps = 50/658 (7%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQ 62
NV +N+II+ R +F M +P +T+ +L+ C SL + G +Q
Sbjct: 215 NVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQ 274
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
A V+K G D FV TA++ LY + G + E + VF +P S+V+W ++S + K
Sbjct: 275 ARVIKCG--AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDA 332
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ +F E+ S V + + VI + Q+H V K+GF + VA +L
Sbjct: 333 FSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAAL 392
Query: 183 VNMYFQCAGIWSAEKMFKD---VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
++MY + I +E++F+D ++ +++V N +I + ++S+ GKA+ L+ RM + +
Sbjct: 393 ISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLR 450
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
++ + +++ L LGK +H +K+ L D+ VGS+L Y+KC +LE ++
Sbjct: 451 TDEFSVCSLLSVLDCLN---LGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKL 507
Query: 300 FSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F I K+ W ++I G+ +I L E+L G P+E T + VL + L
Sbjct: 508 FQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSL 567
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
++H +R G + + +L+ Y+K G +L + R V
Sbjct: 568 PRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG----------SLKLARQV--------- 608
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y+R L D VS + +I+ + +G ++ LF+ M + D++
Sbjct: 609 YDR-------------LPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAI 655
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S+L A + +LG+ +H I K + + + V + L+ MY K GSI K F+++
Sbjct: 656 SSILKAAALSDESSLGAQVHAYITKIGLCTEPS-VGSSLLTMYSKFGSIDDCCKAFSQIN 714
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
++I WTALI++ +G A AL+ + M+ GFKPD+V + VL+AC HGGLV E
Sbjct: 715 GPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYF 774
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M + YG+EPE HY C+VD L R G L+EAE I M P+AL+W T L C+
Sbjct: 775 HLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACK 832
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 160/581 (27%), Positives = 277/581 (47%), Gaps = 42/581 (7%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
LQA +L+ L D F+ +LL Y G + + +F+ +P+ +V+ N ++S + +H
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
E+ + F ++ E S+ VI S Q F E + IK G+ + +V +
Sbjct: 130 LFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVES 189
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L++++ + A K+F+D +V WNTII ++N+G +L+ M V P
Sbjct: 190 ALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKP 249
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T+ V+ +CA L+ GK + A+VIK E DVFV +A+VD YAKC ++ A F
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 301 SEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAF 355
S I N ++VSW ++ GY S + +++ + E+ G N T + V+ R S+
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+ Q+H + + G+ V +L++ Y+KSG I +
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLS----------------------- 405
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ + L ++R +IV N++I + + + + + LF M + D ++
Sbjct: 406 ------EQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVC 457
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
SLLS L L LG +HG K+ ++ D V + L +Y KCGS+ S K+F +
Sbjct: 458 SLLSV---LDCLNLGKQVHGYTLKSGLV-LDLTVGSSLFTLYSKCGSLEESYKLFQGIPF 513
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
++ W ++IS G+ + A+ F EM G PD L AVLT C + G E+
Sbjct: 514 KDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI 573
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
R+ G++ MD +V++ + G LK A ++ +P
Sbjct: 574 HGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 153/585 (26%), Positives = 275/585 (47%), Gaps = 64/585 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
+P+ +VVS+ ++S Y++ AL +F M + G E T ++S C + V E
Sbjct: 311 IPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA 370
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM---PRKSLVTWNSIVSI 115
+Q+ A V K+G + D+ V AL+ +Y + G +D VFED+ R+++V N +++
Sbjct: 371 SQVHAWVFKSGFYL-DSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITS 427
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
F + + LF +++ + E S ++ L L G+Q+HG +K+G +
Sbjct: 428 FSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDC---LNLGKQVHGYTLKSGLVLD 484
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L V +SL +Y +C + + K+F+ + +D W ++I E +A+ L+ M
Sbjct: 485 LTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLD 544
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D P+++T V+ C+ + GK IH ++ ++ + +GSALV+ Y+KC +L+
Sbjct: 545 DGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKL 604
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLR---- 350
A + + + VS ++LI GY+ FLL +++ G+ + F S +L+
Sbjct: 605 ARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAAL 664
Query: 351 ---SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
SSL Q+H I ++G V SL+T Y+K G I D + +N P
Sbjct: 665 SDESSLG---AQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGP----- 716
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
D+++W +IA+ A +G E L+++ M+
Sbjct: 717 ---------------------------DLIAWTALIASYAQHGKANEALQVYNLMKEKGF 749
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLH--GLIKKTEIISSDT-FVCNMLIDMYGKCGSIG 524
PD TFV +LSACS L S H ++K I + +VC ++D G+ G +
Sbjct: 750 KPDKVTFVGVLSACSH-GGLVEESYFHLNSMVKDYGIEPENRHYVC--MVDALGRSGRLR 806
Query: 525 SSVKIFNEMTDR-NVITWTALISALGLNG---FAQRALEKFREME 565
+ N M + + + W L++A ++G + A +K E+E
Sbjct: 807 EAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELE 851
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 152/591 (25%), Positives = 274/591 (46%), Gaps = 48/591 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLN-PVEG 58
+P +VVS N +IS Y + E++LR F M GFE + ++G ++S C +L P+
Sbjct: 110 IPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFS 169
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +K G F + V +AL+ ++ ++ ++ VF D ++ WN+I++ +
Sbjct: 170 ELVCCHTIKMGYFFYEV-VESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALR 228
Query: 119 ---HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+G V D C + + T SS V+ ++ + L FG+ + VIK G + +
Sbjct: 229 NQNYGAVFDLFHEMCVGFQKPDSYTYSS---VLAACASLEKLRFGKVVQARVIKCGAE-D 284
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V ++V++Y +C + A ++F + VVSW ++ +S + ALE++ M
Sbjct: 285 VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRH 344
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V N T VI++C +HA V K+ D V +AL+ Y+K +++
Sbjct: 345 SGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDL 404
Query: 296 AHLCF---SEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRS 351
+ F +I +NIV N +I ++ P +I L +LQ G R +EF+ +L
Sbjct: 405 SEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV 462
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L CL +G + + Y L KSGL+ D + + +
Sbjct: 463 --------LDCL--NLGKQVHGYTL--------KSGLVLD-------------LTVGSSL 491
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y++ G E+ KL + D W +I+ G +E + LF M PD
Sbjct: 492 FTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDE 551
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
T ++L+ CS +L G +HG + I + + L++MY KCGS+ + ++++
Sbjct: 552 STLAAVLTVCSSHPSLPRGKEIHGYTLRAG-IDKGMDLGSALVNMYSKCGSLKLARQVYD 610
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ + + ++ ++LIS +G Q FR+M GF D A+ ++L A
Sbjct: 611 RLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 54/102 (52%)
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
S+LCNL L + + ++ D F+ L+ Y GS+ + K+F+ + +V++
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+IS + + +L F +M FLGF+ + ++ +V++AC
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISAC 160
>gi|302793011|ref|XP_002978271.1| hypothetical protein SELMODRAFT_465 [Selaginella moellendorffii]
gi|300154292|gb|EFJ20928.1| hypothetical protein SELMODRAFT_465 [Selaginella moellendorffii]
Length = 680
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/664 (27%), Positives = 320/664 (48%), Gaps = 48/664 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQL 61
+RN + +ISAY R G++ +AL +F + G P++ TF LL +C ++ +
Sbjct: 24 ERNGECWTVMISAYVRRGWINEALLLFKKSLLEGVRPSEGTFIALLHACSRPASLDQGKK 83
Query: 62 QASVLKNGLFCAD--AFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+L+ F + T+L+ +YG+ G LDE V E + + + W +++
Sbjct: 84 LHRLLEEAGFQESIAPSLATSLIKMYGKCGSLDEAWKVMEKIESRDVELWTVMIASLSHF 143
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL-EFGEQIHGLVIKNGFDYELLV 178
G ++ L + ++ +F+ V+ + + + G +HGL+ + G + ++ V
Sbjct: 144 GKLDRAFELLKRMDLEGDRPSKMTFMAVLRACKDHPEARQVGGVLHGLIRERGLESDVGV 203
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SLVNMY + A+++F +E RDV SWN ++ A + +AL LY M ++ V
Sbjct: 204 GTSLVNMYARWGDAQQAQEVFSQIEARDVSSWNCLLAAYSRCSRQEQALVLYREMMLEGV 263
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ T VI+ CA L++ G IH ++ + D+ + +AL+ FY +C LE A
Sbjct: 264 KPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSGFASDLMLDTALITFYGRCGKLEAALE 323
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F + ++ V+WN +I SSP + + +Q G P+ T VL +
Sbjct: 324 IFEALPARDNVTWNTMIASLNDHSSPEAAMGFFQRMQQEGMAPSRVTLLTVLGLCGSVGE 383
Query: 358 LQL-HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
+L H + G+E V +L+T+Y + G + AL AL PR +
Sbjct: 384 AKLVHSCVRESGFEQDSEVKNTLITAYGRCGGLPQALEIFEAL--PRKIES--------- 432
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR--IYPDNYTF 474
SWN ++ A A G + LELF M I P T
Sbjct: 433 ---------------------SWNAMMGAYAAQGKPRAALELFHRMVKLEQMIQPSVSTI 471
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM- 533
+ L++C L + G + I ++ ++ D FV ++DM +CGS+ + + F+++
Sbjct: 472 ILALNSCRSLAD---GKLVISSIPES-LVEEDGFVQAAMVDMLARCGSLDDASEFFHKLG 527
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFL-GFKPDRVALIAVLTACRHGGLVREG 592
+++ + WT +++A +G + RAL F M G PD V L++VL+AC H GL+ G
Sbjct: 528 KNKDTVLWTTMVAAFARHGHSARALGLFEAMLLDGGGSPDEVTLVSVLSACSHAGLLHRG 587
Query: 593 MELFERMNRSYGVE-PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+++F +GV+ ++ Y CV+DLL R G L+EAE ++ + F ++++W T L G
Sbjct: 588 LQIFASTASDFGVQWRSLELYGCVIDLLGRAGQLQEAEMLVASSDFSGSSVLWITLL-GA 646
Query: 652 QRCR 655
+ R
Sbjct: 647 SKVR 650
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 146/580 (25%), Positives = 275/580 (47%), Gaps = 43/580 (7%)
Query: 81 LLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVAL 139
LLG+Y R G ++ +F+ M ++ W ++S + + G++ + + LF + + V
Sbjct: 1 LLGMYVRCGSVESARKLFDSMAVERNGECWTVMISAYVRRGWINEALLLFKKSLLEGVRP 60
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL--VANSLVNMYFQCAGIWSAEK 197
+E +F+ ++H S L+ G+++H L+ + GF + +A SL+ MY +C + A K
Sbjct: 61 SEGTFIALLHACSRPASLDQGKKLHRLLEEAGFQESIAPSLATSLIKMYGKCGSLDEAWK 120
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG-LQ 256
+ + +E RDV W +I +L+ +A EL RM ++ P++ TF+ V+ +C +
Sbjct: 121 VMEKIESRDVELWTVMIASLSHFGKLDRAFELLKRMDLEGDRPSKMTFMAVLRACKDHPE 180
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+G +H + + LE DV VG++LV+ YA+ + + A FS+I +++ SWN L+
Sbjct: 181 ARQVGGVLHGLIRERGLESDVGVGTSLVNMYARWGDAQQAQEVFSQIEARDVSSWNCLLA 240
Query: 317 GYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV 375
Y+ S ++ L E++ G +P+ T + V+ + + L+ G ++ +
Sbjct: 241 AYSRCSRQEQALVLYREMMLEGVKPDRLTLNTVIDVCASLKDLE-------QGSRIHQQI 293
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
A SG SD L TAL Y R G+ +++ L D
Sbjct: 294 --------ASSGFASD-LMLDTALIT------------FYGRCGKLEAALEIFEALPARD 332
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
V+WN +IA+ + + + F+ M+ + P T +++L C + L +H
Sbjct: 333 NVTWNTMIASLNDHSSPEAAMGFFQRMQQEGMAPSRVTLLTVLGLCGSVGEAKL---VHS 389
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
++++ D+ V N LI YG+CG + +++IF + + +W A++ A G +
Sbjct: 390 CVRESGF-EQDSEVKNTLITAYGRCGGLPQALEIFEALPRKIESSWNAMMGAYAAQGKPR 448
Query: 556 RALEKFREMEFLG--FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
ALE F M L +P +I L +CR + +G + + S VE +
Sbjct: 449 AALELFHRMVKLEQMIQPSVSTIILALNSCRS---LADGKLVISSIPESL-VEEDGFVQA 504
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+VD+L R G L +A + + + ++W T + R
Sbjct: 505 AMVDMLARCGSLDDASEFFHKLGKNKDTVLWTTMVAAFAR 544
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 5/245 (2%)
Query: 413 GIYNRTGQYNETVKLLSQL--ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
G+Y R G KL + ER + W ++I+A G E L LFK + P
Sbjct: 3 GMYVRCGSVESARKLFDSMAVER-NGECWTVMISAYVRRGWINEALLLFKKSLLEGVRPS 61
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKI 529
TF++LL ACS+ +L G LH L+++ S + LI MYGKCGS+ + K+
Sbjct: 62 EGTFIALLHACSRPASLDQGKKLHRLLEEAGFQESIAPSLATSLIKMYGKCGSLDEAWKV 121
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
++ R+V WT +I++L G RA E + M+ G +P ++ +AVL AC+
Sbjct: 122 MEKIESRDVELWTVMIASLSHFGKLDRAFELLKRMDLEGDRPSKMTFMAVLRACKDHPEA 181
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
R+ + + R G+E ++ +V++ R+G ++A+++ + + + W L
Sbjct: 182 RQVGGVLHGLIRERGLESDVGVGTSLVNMYARWGDAQQAQEVFSQIE-ARDVSSWNCLLA 240
Query: 650 GCQRC 654
RC
Sbjct: 241 AYSRC 245
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMIN--RGFEPTQFTFGGLLSCDSLNPVEG 58
+P + S+N+++ AY+ G AL +F M+ + +P+ T +L+ +S +
Sbjct: 426 LPRKIESSWNAMMGAYAAQGKPRAALELFHRMVKLEQMIQPSVSTI--ILALNSCRSLAD 483
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-KSLVTWNSIVSIFG 117
+L S + L D FV A++ + R G LD+ F + + K V W ++V+ F
Sbjct: 484 GKLVISSIPESLVEEDGFVQAAMVDMLARCGSLDDASEFFHKLGKNKDTVLWTTMVAAFA 543
Query: 118 KHGFVEDCMFLF-CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI 163
+HG + LF L+ + E + V V+ S+ L G QI
Sbjct: 544 RHGHSARALGLFEAMLLDGGGSPDEVTLVSVLSACSHAGLLHRGLQI 590
>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Cucumis sativus]
Length = 781
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 194/660 (29%), Positives = 320/660 (48%), Gaps = 51/660 (7%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE--PTQFTFGGLLSCDSLNPVEGA 59
P N SFN ++ Y +LR F G + +FT L P G
Sbjct: 34 PPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLALKACCGFPKLGR 93
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ V+ +G F + V +L+ +Y + G L+ SVF+++ +V+WN+I+S F K
Sbjct: 94 QIHGFVISSG-FVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGFEKS 152
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
E+ + + + V ++ + + ++ FG Q+H L +K GF ++ V
Sbjct: 153 ---ENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVG 209
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII-GALAESENFGKALELYLRMSVDIV 238
N+LV MY + + A K+F ++ RD VSW+ +I G E +N +A+ ++++M + V
Sbjct: 210 NALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGV 269
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ ++ C +N LGK IH +K E VG+ L+ Y+KC+ +E A
Sbjct: 270 KFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKA 329
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS----SLA 354
F I+++N++SW +I Y + S+F + L G PN+ TF +L + ++
Sbjct: 330 VFELINDRNVISWTTMISLY--EEGAVSLFNKMRLD--GVYPNDVTFIGLLHAITIRNMV 385
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q L +H L I+ + + V SL+T YAK + DA
Sbjct: 386 EQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDA---------------------- 423
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
++ +L +I+SWN +I+ A N +E LE F Y P+ YTF
Sbjct: 424 ----------SRVFIELPYREIISWNALISGYAQNALCQEALEAFLYA-IMEYKPNEYTF 472
Query: 475 VSLLSACSKLCNLAL--GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
S+L+A S +++L G H + K + + D + L+DMY K GSI S ++FNE
Sbjct: 473 GSVLNAISAGEDISLKHGQRCHSHLIKVGL-NVDPIISGALLDMYAKRGSIQESQRVFNE 531
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ ++ WTALIS +G + ++ F EME KPD V ++VLTAC +V G
Sbjct: 532 TSKQSQFAWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMG 591
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F M + + +EPE +HY C+VD+L R G L+EAE+I+ +P P ++ L C+
Sbjct: 592 RQFFNMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILARIPGGPGVSALQSLLGACR 651
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 94/174 (54%), Gaps = 6/174 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC----DSLNPV 56
+P R ++S+N++IS Y++ ++AL FLY I ++P ++TFG +L+ + ++
Sbjct: 430 LPYREIISWNALISGYAQNALCQEALEAFLYAIME-YKPNEYTFGSVLNAISAGEDISLK 488
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G + + ++K GL D + ALL +Y + G + E VF + ++S W +++S +
Sbjct: 489 HGQRCHSHLIKVGL-NVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGY 547
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
+HG E + LF E+ + + F+ V+ S + ++ G Q ++IK+
Sbjct: 548 AQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKD 601
>gi|449450916|ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 616
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 270/547 (49%), Gaps = 40/547 (7%)
Query: 111 SIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
SI + H V D FL +L+R T I + L+FG Q+H +IK
Sbjct: 40 SIKPLLQTHNVV-DIQFLV-QLLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKL 97
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
GF + +LV+MY +C I A K+F ++ VV+WN+++ ++ A+ L+
Sbjct: 98 GFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLF 157
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
L M + P + + C+ LQ LG +HA +K +V VG+ L+D Y+KC
Sbjct: 158 LEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKC 217
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVL 349
NL+ + F + NKN+ +W ++I GYA P ++ L+ E+L L +PN T++ +L
Sbjct: 218 CNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMILMREMLHLNLKPNGMTYNSLL 277
Query: 350 RSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
S + Q+HC II GYE+ Y+ +L+T+Y++
Sbjct: 278 SSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSEC------------------- 318
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
G + K+ S + D +SWN VIA + G +E LE F MR
Sbjct: 319 ------------CGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRRE 366
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ D +TF S+ A L G +HGL+ KT + + V N L+ MY + G+I
Sbjct: 367 KFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTG-YTLNLSVQNGLVSMYARSGAIRD 425
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
S +F+ M + ++I+W +L+S +G + A++ F +M KPD + +AVLTAC H
Sbjct: 426 SKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSH 485
Query: 586 GGLVREGMELFERMNRSYGVE-PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
GL+ +G+E F+ M S VE P+++HY +VDL R G L EAE I ++P P I+
Sbjct: 486 VGLLDKGLEYFKLMRNSELVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIY 545
Query: 645 RTFLEGC 651
+ L C
Sbjct: 546 KALLSAC 552
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 137/562 (24%), Positives = 270/562 (48%), Gaps = 49/562 (8%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ ++++K G F + ++ TAL+ +YG+ + + VF++M S+VTWNS+V+ +
Sbjct: 87 GIQVHSTIIKLG-FSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYL 145
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G+ + LF E+++ + T S G + G S Q + G Q+H + +K F ++
Sbjct: 146 QAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVV 205
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V L++MY +C + + ++F + ++V +W ++I A ++ +A+ L M
Sbjct: 206 VGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMILMREMLHLN 265
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK-CDNLEGA 296
+ PN T+ +++S + ++ K IH ++I E + ++ LV Y++ C +LE
Sbjct: 266 LKPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDY 325
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLR----S 351
S I + +SWNA+I G+ + ++ I++ + + + FTF+ + + +
Sbjct: 326 RKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMT 385
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
S + Q+H L+ + GY V L++ YA+SG I D+ + +N
Sbjct: 386 SALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMN----------- 434
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
D++SWN +++ CA++G +E ++LF+ MR I PDN
Sbjct: 435 ---------------------EHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDN 473
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV-CNMLIDMYGKCGSIGSSVKIF 530
+F+++L+ACS + L G L++ +E++ L+D++G+ G + +
Sbjct: 474 TSFLAVLTACSHVGLLDKGLEYFKLMRNSELVEPPKLEHYATLVDLFGRAGKLYEAEAFI 533
Query: 531 NEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
+ + + + AL+SA ++G A R +K E+ + D I + A
Sbjct: 534 ESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLEL----YPYDPATYIMLSNALGRD 589
Query: 587 GLVREGMELFERM-NRSYGVEP 607
G + + M NR EP
Sbjct: 590 GYWDDAASIRRLMSNRGVKKEP 611
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/487 (24%), Positives = 222/487 (45%), Gaps = 55/487 (11%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-GAQLQ 62
+VV++NS+++ Y + GY A+ +FL M+ +G EPT F+ GGL+ C L + G+QL
Sbjct: 133 SVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLH 192
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
A LK F ++ VGT L+ +Y + L + VF+ M K++ TW S++S + ++
Sbjct: 193 AMSLKLR-FSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLP 251
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ M L E++ + ++ ++ S + + +QIH +I G++ +A +L
Sbjct: 252 HEAMILMREMLHLNLKPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTL 311
Query: 183 VNMYFQCAG-IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM---SVDIV 238
V Y +C G + K+ ++ + D +SWN +I +ALE +++M D+
Sbjct: 312 VTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVD 371
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
F T+ I + L+ GK IH V K ++ V + LV YA+ + + +
Sbjct: 372 FFTFTSIFKAIGMTSALEE---GKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKM 428
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
FS ++ +++SWN+L+ G A +I L ++ + +P+ +F VL
Sbjct: 429 VFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVL-------- 480
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI-----IA 412
T+ + GL+ L + + V P + +
Sbjct: 481 -----------------------TACSHVGLLDKGLEYFKLMRNSELVEPPKLEHYATLV 517
Query: 413 GIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDY-------KEVLELFKYMRA 464
++ R G+ E + + P I + +++AC +G+ K++LEL+ Y A
Sbjct: 518 DLFGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLELYPYDPA 577
Query: 465 ARIYPDN 471
I N
Sbjct: 578 TYIMLSN 584
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 132/256 (51%), Gaps = 4/256 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
M ++NV ++ S+IS Y+R +A+ + M++ +P T+ LLS S + +
Sbjct: 230 MLNKNVFTWTSMISGYARNQLPHEAMILMREMLHLNLKPNGMTYNSLLSSFSCPRHFDKC 289
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRH-GCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ ++ G + ++ ++ L+ Y G L++ V ++ ++WN++++ F
Sbjct: 290 KQIHCRIITEG-YESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFT 348
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G E+ + F ++ R + + +F + + LE G+QIHGLV K G+ L
Sbjct: 349 NLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLS 408
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N LV+MY + I ++ +F + D++SWN+++ A +A++L+ +M
Sbjct: 409 VQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTC 468
Query: 238 VFPNQTTFVYVINSCA 253
+ P+ T+F+ V+ +C+
Sbjct: 469 IKPDNTSFLAVLTACS 484
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 183/681 (26%), Positives = 324/681 (47%), Gaps = 77/681 (11%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
N+++ AY CG + DA R+ L I P T +V+ NG
Sbjct: 43 NTLLHAYLSCGALPDARRLLLTDIA---HPNVITH-------------------NVMLNG 80
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF------------- 116
Y + G L + V +F MP + + +WN+++S +
Sbjct: 81 ---------------YVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESF 125
Query: 117 ---GKHGFVEDCMFLFCELVRSEVALTESSF----VGVIHGLSNEQDLEFGEQIHGLVIK 169
+ G F F ++S AL E S +G++ ++ D + + + ++
Sbjct: 126 VSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVR 185
Query: 170 NGF------------DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL 217
G + + NS++ Y + G+ A ++F + RDVVSWN ++ AL
Sbjct: 186 CGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
++S +AL++ + M V + TT+ + +CA L + GK +HA+VI+N D
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDP 305
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQL 336
+V SALV+ YAKC + A F+ + ++N V+W LI G+ T S+ L ++
Sbjct: 306 YVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAE 365
Query: 337 GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
++F + ++ + L QLH L ++ G V SL++ YAK + A
Sbjct: 366 LMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 425
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+ +N V ++I +++ G + + + ++++WN ++ A +G
Sbjct: 426 ESIFRFMNEKDIVSWTSMITA-HSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAE 484
Query: 453 KEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
++ L ++ M + + + PD T+V+L C+ L LG + G K +I DT V N
Sbjct: 485 EDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIL-DTSVAN 543
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
+I MY KCG I + K+F+ + +++++W A+I+ +G ++A+E F ++ G KP
Sbjct: 544 AVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKP 603
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D ++ +AVL+ C H GLV+EG F+ M R + + P ++H+ C+VDLL R GHL EA+ +
Sbjct: 604 DYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDL 663
Query: 632 ITTMPFPPNALIWRTFLEGCQ 652
I MP P A +W L C+
Sbjct: 664 IDEMPMKPTAEVWGALLSACK 684
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 142/522 (27%), Positives = 244/522 (46%), Gaps = 84/522 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
MP+R+VVS+N ++SA S+ G V +AL M + M ++G T+ L +C L+ + G
Sbjct: 230 MPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWG 289
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A V++N L C D +V +AL+ LY + GC E VF + ++ V W +++ F +
Sbjct: 290 KQLHAQVIRN-LPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQ 348
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG + + LF ++ + L + + +I G + DL G Q+H L +K+G ++V
Sbjct: 349 HGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVV 408
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY-------- 230
+NSL++MY +C + SAE +F+ + +D+VSW ++I A ++ N KA E +
Sbjct: 409 SNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNV 468
Query: 231 -------------------LRM-----SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
LRM S V P+ T+V + CA L + LG I
Sbjct: 469 ITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIG 528
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPT 325
+ +K L D V +A++ Y+KC + A F ++ K+IVSWNA+I GY+
Sbjct: 529 RTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQ 588
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAK 385
+I + ++L+ G +P+ ++ VL + +
Sbjct: 589 AIEIFDDILKRGAKPDYISYVAVL-------------------------------SGCSH 617
Query: 386 SGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWN 440
SGL+ + ++ + + P + + + R G E L+ ++ +P W
Sbjct: 618 SGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWG 677
Query: 441 IVIAACAHNGD-------YKEVLEL-----FKYMRAARIYPD 470
+++AC +G+ K V EL YM A+IY D
Sbjct: 678 ALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYAD 719
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 149/607 (24%), Positives = 274/607 (45%), Gaps = 71/607 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFG-GLLSCDSLNPVEG 58
MP R+V S+N+++S Y + +L F+ M G P FTF + SC +L
Sbjct: 97 MPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSL 156
Query: 59 A-QLQASVLKNGLFCADAFVGTALLGLYGRHGC--------------------------- 90
A QL V K G D+ V AL+ ++ R G
Sbjct: 157 ALQLLGMVQKFG-SQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYV 215
Query: 91 ----LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
+D + +F+ MP + +V+WN +VS + G V + + + ++ V L +++
Sbjct: 216 KTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTS 275
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
+ + L +G+Q+H VI+N + VA++LV +Y +C A+ +F + R+
Sbjct: 276 SLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRN 335
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
V+W +I + F +++EL+ +M +++ +Q +I+ C + LG+ +H+
Sbjct: 336 NVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHS 395
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL---------- 316
+K+ V V ++L+ YAKCDNL+ A F ++ K+IVSW ++I
Sbjct: 396 LCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAK 455
Query: 317 ------GYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYE 370
G ++K+ T +L +Q G + +V+ S + + + + G
Sbjct: 456 AREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCA 515
Query: 371 NY--EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
+ + ++ K GLI D AN + +Y++ G+ E K+
Sbjct: 516 DLGANKLGDQIIGRTVKVGLILDTSV-------------ANAVITMYSKCGRILEARKVF 562
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
L DIVSWN +I + +G K+ +E+F + PD ++V++LS CS +
Sbjct: 563 DFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQ 622
Query: 489 LGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI-TWTALI 545
G S ++K+ IS + F C ++D+ G+ G + + + +EM + W AL+
Sbjct: 623 EGKSYFDMMKRVHNISPGLEHFSC--MVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALL 680
Query: 546 SALGLNG 552
SA ++G
Sbjct: 681 SACKIHG 687
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 174/355 (49%), Gaps = 28/355 (7%)
Query: 242 QTTFVYVINSCAGLQNS---ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
Q T ++ SC L ++ +L H VI + + +++ Y K L A
Sbjct: 42 QNTLLHAYLSCGALPDARRLLLTDIAHPNVITH---------NVMLNGYVKLGRLSDAVE 92
Query: 299 CFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRS----- 351
F + +++ SWN L+ GY S+ S+ + + + G PN FTF++ ++S
Sbjct: 93 LFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALG 152
Query: 352 --SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
SLA QLL ++ + G ++ V +L+ + + G + A + P +
Sbjct: 153 ERSLALQLLG---MVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNS 209
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
++ G Y +T + ++L + D+VSWN++++A + +G +E L++ M++ +
Sbjct: 210 MLVG-YVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRL 268
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
D+ T+ S L+AC++L +L G LH +I+ I D +V + L+++Y KCG +
Sbjct: 269 DSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCI--DPYVASALVELYAKCGCFKEAKG 326
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+FN + DRN + WT LI+ +G ++E F +M D+ AL +++ C
Sbjct: 327 VFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGC 381
>gi|302816163|ref|XP_002989761.1| hypothetical protein SELMODRAFT_20442 [Selaginella moellendorffii]
gi|300142538|gb|EFJ09238.1| hypothetical protein SELMODRAFT_20442 [Selaginella moellendorffii]
Length = 749
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 180/625 (28%), Positives = 307/625 (49%), Gaps = 56/625 (8%)
Query: 81 LLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVA-- 138
L+ Y G L+E +F MP +++V+WN++VS + G + + +
Sbjct: 72 LIASYASAGLLEEAWKIFHAMPGRNVVSWNTMVSANAQEGDFSRAKIFLARIPQHSLPDG 131
Query: 139 ------LTESSFVGVI-HGLSNEQDLE--FG---------------------EQIHGLVI 168
LT S +G++ G + +E FG E+ L+
Sbjct: 132 ITFVTILTGCSHLGLVSRGREFFRSIESAFGMKPGVEHYCCMVDVLGRAKHLEEAEELIF 191
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
K G D E + N L+ MY +C + A K+F ++ SWN ++ A A + + +AL
Sbjct: 192 KTGHDRETRLRNLLIQMYGECGSLIDARKVFDRTPDPNIFSWNIMLAAYAHNGHSNEALV 251
Query: 229 LYLRM--SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
L RM S V P++ T+V ++++C+ L G+ IHA VI + +E +V V +A+V+
Sbjct: 252 LSQRMKDSGATVVPDRVTYVILLHACSNLGALREGRMIHASVIVSGMESNVVVATAIVNM 311
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTF 345
Y KC ++ A + F ++ K+++ WN++I YA +++ L + RP+ TF
Sbjct: 312 YGKCGSMGDAKMVFDKMPAKDVICWNSMISAYALNGLGKSALDLYARMRHSCVRPDAGTF 371
Query: 346 SHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
L + L+ +H I E V +L++ Y K G + ++A A+ +
Sbjct: 372 VAALDACSVLNSLEDGKKIHAAISASKLEWNVMVATALVSMYGKCGCLERSIAVFRAMEV 431
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQL--ERPDIVSWNIVIAACAHNGDYKEVLELF 459
R ++ + G G+ ++L +++ E + + WN +IAA G +E L L+
Sbjct: 432 -RNLISWTAMLGALAHNGRDAAALELFARMRDEGREALLWNALIAAYTARGHPREALRLY 490
Query: 460 KYM------RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS----SDTFV 509
M A + PD TF ++L AC + ALG G + T+ I+ +D V
Sbjct: 491 AEMILAERRGAPPVRPDRNTFAAVLEACGSIGTAALGE---GRMIHTQAIARACDTDVIV 547
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+ LI MY KCGS+G +V IF E++ R+V+ T +I+A G +G + ALE F EM G
Sbjct: 548 ASALIAMYSKCGSLGDAVAIFRELSRKRSVVLVTTMIAAYGHHGKLELALELFWEMAQRG 607
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
KP+R+ +++L++C +RE + F+ M ++P +HYH V+DLL R G + +A
Sbjct: 608 LKPNRITFVSLLSSCSAANSLREAVFYFQIMIHDCDIQPGAEHYHFVIDLLGRSGKVAQA 667
Query: 629 EKIITTMPFPPNALIWRTFLEGCQR 653
E++I +MPF P W + L C+R
Sbjct: 668 EELINSMPFAPGCGAWMSLLAACER 692
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 224/455 (49%), Gaps = 63/455 (13%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE--PTQFTFGGLL-SCDSLNPV-E 57
PD N+ S+N +++AY+ G+ +AL + M + G P + T+ LL +C +L + E
Sbjct: 226 PDPNIFSWNIMLAAYAHNGHSNEALVLSQRMKDSGATVVPDRVTYVILLHACSNLGALRE 285
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + ASV+ +G+ ++ V TA++ +YG+ G + + VF+ MP K ++ WNS++S +
Sbjct: 286 GRMIHASVIVSGME-SNVVVATAIVNMYGKCGSMGDAKMVFDKMPAKDVICWNSMISAYA 344
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G + + L+ + S V +FV + S LE G++IH + + ++ ++
Sbjct: 345 LNGLGKSALDLYARMRHSCVRPDAGTFVAALDACSVLNSLEDGKKIHAAISASKLEWNVM 404
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM---- 233
VA +LV+MY +C + + +F+ +E+R+++SW ++GALA + ALEL+ RM
Sbjct: 405 VATALVSMYGKCGCLERSIAVFRAMEVRNLISWTAMLGALAHNGRDAAALELFARMRDEG 464
Query: 234 -----------------------------------SVDIVFPNQTTFVYVINSCAGLQNS 258
V P++ TF V+ +C + +
Sbjct: 465 REALLWNALIAAYTARGHPREALRLYAEMILAERRGAPPVRPDRNTFAAVLEACGSIGTA 524
Query: 259 IL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-NIVSWNALI 315
L G+ IH + I A + DV V SAL+ Y+KC +L A F E+S K ++V +I
Sbjct: 525 ALGEGRMIHTQAIARACDTDVIVASALIAMYSKCGSLGDAVAIFRELSRKRSVVLVTTMI 584
Query: 316 LGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLA----------FQLLQLHCLI 364
Y ++ L E+ Q G +PN TF +L S A FQ++ +H
Sbjct: 585 AAYGHHGKLELALELFWEMAQRGLKPNRITFVSLLSSCSAANSLREAVFYFQIM-IHDCD 643
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
I+ G E+Y +V+ L +SG ++ A + ++
Sbjct: 644 IQPGAEHYHFVIDLL----GRSGKVAQAEELINSM 674
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 134/517 (25%), Positives = 225/517 (43%), Gaps = 103/517 (19%)
Query: 153 NEQDLEFGEQIHGLVI----KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI---- 204
N DL G +IH V+ ++G D LL N +++MY +C G+ A +F +E
Sbjct: 10 NSGDLSAGRRIHKRVLDLQRQHGQDVFLL--NLVIDMYGKCGGLGEARAVFDAIEHPNVF 67
Query: 205 ---------------------------RDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
R+VVSWNT++ A A+ +F +A +++L
Sbjct: 68 SFNILIASYASAGLLEEAWKIFHAMPGRNVVSWNTMVSANAQEGDFSRA-KIFLARIPQH 126
Query: 238 VFPNQTTFVYVINSCA-----------------------GLQN-----SILGKSIHAK-- 267
P+ TFV ++ C+ G+++ +LG++ H +
Sbjct: 127 SLPDGITFVTILTGCSHLGLVSRGREFFRSIESAFGMKPGVEHYCCMVDVLGRAKHLEEA 186
Query: 268 ---VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
+ K + + + + L+ Y +C +L A F + NI SWN ++ YA
Sbjct: 187 EELIFKTGHDRETRLRNLLIQMYGECGSLIDARKVFDRTPDPNIFSWNIMLAAYAHNGHS 246
Query: 325 TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
+L + ++ + + V+ + + +L C LG+L
Sbjct: 247 NEALVLSQRMK-------DSGATVVPDRVTYVILLHAC-----------SNLGAL----- 283
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
+ G + A V+ + VV A I +Y + G + + ++ D++ WN +I+
Sbjct: 284 REGRMIHASVIVSGME--SNVVVATAIVNMYGKCGSMGDAKMVFDKMPAKDVICWNSMIS 341
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
A A NG K L+L+ MR + + PD TFV+ L ACS L +L G +H I ++ +
Sbjct: 342 AYALNGLGKSALDLYARMRHSCVRPDAGTFVAALDACSVLNSLEDGKKIHAAISASK-LE 400
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
+ V L+ MYGKCG + S+ +F M RN+I+WTA++ AL NG ALE F M
Sbjct: 401 WNVMVATALVSMYGKCGCLERSIAVFRAMEVRNLISWTAMLGALAHNGRDAAALELFARM 460
Query: 565 EFLGFKPDRVALI--AVLTACRHGGLVREGMELFERM 599
G R AL+ A++ A G RE + L+ M
Sbjct: 461 RDEG----REALLWNALIAAYTARGHPREALRLYAEM 493
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 167/376 (44%), Gaps = 41/376 (10%)
Query: 248 VINSCAGLQNSILGKSIHAKVI--KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
++ SC + G+ IH +V+ + DVF+ + ++D Y KC L A F I +
Sbjct: 4 LLRSCGNSGDLSAGRRIHKRVLDLQRQHGQDVFLLNLVIDMYGKCGGLGEARAVFDAIEH 63
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELL----------QLGYRPNEFTFS--------- 346
N+ S+N LI YAS + + + + E FS
Sbjct: 64 PNVFSFNILIASYASAGLLEEAWKIFHAMPGRNVVSWNTMVSANAQEGDFSRAKIFLARI 123
Query: 347 --HVLRSSLAFQLLQLHCL---IIRMGYENYEYVLGS------------LMTSYAKSGLI 389
H L + F + C ++ G E + + + ++ ++ +
Sbjct: 124 PQHSLPDGITFVTILTGCSHLGLVSRGREFFRSIESAFGMKPGVEHYCCMVDVLGRAKHL 183
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
+A + R N++ +Y G + K+ + P+I SWNI++AA AHN
Sbjct: 184 EEAEELIFKTGHDRETRLRNLLIQMYGECGSLIDARKVFDRTPDPNIFSWNIMLAAYAHN 243
Query: 450 GDYKEVLELFKYMR--AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
G E L L + M+ A + PD T+V LL ACS L L G +H + + + S+
Sbjct: 244 GHSNEALVLSQRMKDSGATVVPDRVTYVILLHACSNLGALREGRMIHASVIVSG-MESNV 302
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
V +++MYGKCGS+G + +F++M ++VI W ++ISA LNG + AL+ + M
Sbjct: 303 VVATAIVNMYGKCGSMGDAKMVFDKMPAKDVICWNSMISAYALNGLGKSALDLYARMRHS 362
Query: 568 GFKPDRVALIAVLTAC 583
+PD +A L AC
Sbjct: 363 CVRPDAGTFVAALDAC 378
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 156/325 (48%), Gaps = 48/325 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
MP ++V+ +NS+ISAY+ G + AL ++ M + P TF L +C LN +E G
Sbjct: 328 MPAKDVICWNSMISAYALNGLGKSALDLYARMRHSCVRPDAGTFVAALDACSVLNSLEDG 387
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVT---------- 108
++ A++ + L + V TAL+ +YG+ GCL+ ++VF M ++L++
Sbjct: 388 KKIHAAISASKLEW-NVMVATALVSMYGKCGCLERSIAVFRAMEVRNLISWTAMLGALAH 446
Query: 109 -----------------------WNSIVSIFGKHGFVEDCMFLFCELVRSE------VAL 139
WN++++ + G + + L+ E++ +E V
Sbjct: 447 NGRDAAALELFARMRDEGREALLWNALIAAYTARGHPREALRLYAEMILAERRGAPPVRP 506
Query: 140 TESSFVGVIH--GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEK 197
++F V+ G L G IH I D +++VA++L+ MY +C + A
Sbjct: 507 DRNTFAAVLEACGSIGTAALGEGRMIHTQAIARACDTDVIVASALIAMYSKCGSLGDAVA 566
Query: 198 MFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
+F+++ R VV T+I A ALEL+ M+ + PN+ TFV +++SC+
Sbjct: 567 IFRELSRKRSVVLVTTMIAAYGHHGKLELALELFWEMAQRGLKPNRITFVSLLSSCSA-A 625
Query: 257 NSILGKSIHAKVIKNALECDVFVGS 281
NS+ + +++ + +CD+ G+
Sbjct: 626 NSLREAVFYFQIMIH--DCDIQPGA 648
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 39/194 (20%)
Query: 474 FVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV----- 527
+LL +C +L+ G +H ++ D F+ N++IDMYGKCG +G +
Sbjct: 1 LANLLRSCGNSGDLSAGRRIHKRVLDLQRQHGQDVFLLNLVIDMYGKCGGLGEARAVFDA 60
Query: 528 --------------------------KIFNEMTDRNVITWTALISALGLNGFAQRA---L 558
KIF+ M RNV++W ++SA G RA L
Sbjct: 61 IEHPNVFSFNILIASYASAGLLEEAWKIFHAMPGRNVVSWNTMVSANAQEGDFSRAKIFL 120
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDL 618
+ + PD + + +LT C H GLV G E F + ++G++P ++HY C+VD+
Sbjct: 121 ARIPQHSL----PDGITFVTILTGCSHLGLVSRGREFFRSIESAFGMKPGVEHYCCMVDV 176
Query: 619 LVRYGHLKEAEKII 632
L R HL+EAE++I
Sbjct: 177 LGRAKHLEEAEELI 190
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQ 62
R+VV ++I+AY G +E AL +F M RG +P + TF LL SC + N + A
Sbjct: 575 RSVVLVTTMIAAYGHHGKLELALELFWEMAQRGLKPNRITFVSLLSSCSAANSLREAVFY 634
Query: 63 ASVLKNGLFCADAFVGTA----LLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
++ + D G ++ L GR G + + + MP W S+++
Sbjct: 635 FQIM---IHDCDIQPGAEHYHFVIDLLGRSGKVAQAEELINSMPFAPGCGAWMSLLAACE 691
Query: 118 KHGFVE 123
+H VE
Sbjct: 692 RHSKVE 697
>gi|302814700|ref|XP_002989033.1| hypothetical protein SELMODRAFT_129138 [Selaginella moellendorffii]
gi|300143134|gb|EFJ09827.1| hypothetical protein SELMODRAFT_129138 [Selaginella moellendorffii]
Length = 806
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 181/661 (27%), Positives = 326/661 (49%), Gaps = 47/661 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+ +R VS+N ++SA++R G + +L +F M GF+P TF +L SC ++ +E
Sbjct: 120 IQERTSVSWNVMLSAHARQGNFQMSLIVFRLMQLDGFKPEAITFLAVLESCAAVGSLETG 179
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGK 118
+L S ++ + D VG A++ +YG+ G ++E VF++ R+S+V+WNS+++ F
Sbjct: 180 KLVHSNIQEQIGELDPQVGDAVVNMYGKCGAVEEAARVFDEQGHRRSVVSWNSMIAAFFL 239
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ +E+ F + ++FV ++HG ++ + L G+ ++G+V + F E +
Sbjct: 240 NVLLEEAFRCFRTMQLEGFHPNFATFVNLLHGCTDLEALAEGDAVYGMVAETEFHSEPGI 299
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS--WNTIIGALAESENFGKALELYLRMSVD 236
+LVNMY C + +A ++ + RD VS W++ + A A + L + R+ ++
Sbjct: 300 EIALVNMYSSCGELDAAYQILQG---RDDVSLPWSSFLRATARYGYSNETLAVLRRIQLN 356
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+FPN T V +++C G IH V++ ++ + V +AL Y KC +L+ A
Sbjct: 357 GIFPNTTALVSGLSACVAPGFLRSGTGIHELVLEAGIQHHLVVATALFVMYGKCKSLDHA 416
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF 355
L F + ++ V+WNA++ Y+S + L +LQ G R N +F VL SSL +
Sbjct: 417 RLLFDGMVQRDSVAWNAIMSLYSSYGRHEGVIELFRSMLQEGVRFNRASFCIVL-SSLVY 475
Query: 356 QLLQL-----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ L H + I+ Y+ + V G+L+T YA+ G + A
Sbjct: 476 PAMLLIGESVHSMAIQKNYDEDDVVAGALVTMYARLGKLEKARE---------------- 519
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
I++R + P W +I+AC + ++ + L L+ M PD
Sbjct: 520 ---IFDRVSA-----------KEPSTALWTAMISACVEHREHHQGLALYHQMLLEGYRPD 565
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ ++ L CS L +L G +H + + + D V + L+DMYGKCG + +S +F
Sbjct: 566 KVSLLAALGVCSSLASLKSGRRIHEQVVEAGL-EPDEVVASALVDMYGKCGGLEASRAVF 624
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
++ + W +L++ G + F M+ G + D + +++L AC H G+
Sbjct: 625 QRSEKQDPVLWNSLLAVEARCG--GDTMRLFHWMQQDGLRSDGASFVSLLAACSHAGVED 682
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + F M +GV P +H+ C+VDLL R G L+ AE++I ++ +W T L
Sbjct: 683 KAWDYFAAMKWDFGVVPASEHFGCMVDLLARTGKLEAAEELIFKSRLRLDSRLWITLLAA 742
Query: 651 C 651
C
Sbjct: 743 C 743
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 151/576 (26%), Positives = 260/576 (45%), Gaps = 45/576 (7%)
Query: 89 GCLDEVVSVFEDMPRKS-LVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGV 147
G L++ +F + S +VTW I++ + G + + LF V L ++SF+ V
Sbjct: 6 GRLEDARRIFREFHSPSNVVTWTGIITANAESGHFSEAIDLFHRTQLEGVLLDKTSFLAV 65
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
++ ++ +L G LV + G + ++++ N+LVNMY C + A +F ++ R
Sbjct: 66 VNACADCGNLVAGRLAQRLVREAGLEADVVLGNTLVNMYGLCHSVDEACSVFDSIQERTS 125
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
VSWN ++ A A NF +L ++ M +D P TF+ V+ SCA + + GK +H+
Sbjct: 126 VSWNVMLSAHARQGNFQMSLIVFRLMQLDGFKPEAITFLAVLESCAAVGSLETGKLVHSN 185
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN-KNIVSWNALILGYASKSSPTS 326
+ + E D VG A+V+ Y KC +E A F E + +++VSWN++I +
Sbjct: 186 IQEQIGELDPQVGDAVVNMYGKCGAVEEAARVFDEQGHRRSVVSWNSMIAAFFLNVLLEE 245
Query: 327 IFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAK 385
F +QL G+ PN TF ++L + +L A
Sbjct: 246 AFRCFRTMQLEGFHPNFATFVNLLHGCTDLE---------------------ALAEGDAV 284
Query: 386 SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI-VSWNIVIA 444
G++++ F + I A+V +Y+ G+ + ++L R D+ + W+ +
Sbjct: 285 YGMVAET-EFHSEPGIEIALV------NMYSSCGELDAAYQILQG--RDDVSLPWSSFLR 335
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
A A G E L + + ++ I+P+ VS LSAC L G+ +H L+ + I
Sbjct: 336 ATARYGYSNETLAVLRRIQLNGIFPNTTALVSGLSACVAPGFLRSGTGIHELVLEAG-IQ 394
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
V L MYGKC S+ + +F+ M R+ + W A++S G + +E FR M
Sbjct: 395 HHLVVATALFVMYGKCKSLDHARLLFDGMVQRDSVAWNAIMSLYSSYGRHEGVIELFRSM 454
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV---- 620
G + +R + VL++ LV M L S ++ D V LV
Sbjct: 455 LQEGVRFNRASFCIVLSS-----LVYPAMLLIGESVHSMAIQKNYDEDDVVAGALVTMYA 509
Query: 621 RYGHLKEAEKIITTMPFP-PNALIWRTFLEGCQRCR 655
R G L++A +I + P+ +W + C R
Sbjct: 510 RLGKLEKAREIFDRVSAKEPSTALWTAMISACVEHR 545
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 122/237 (51%), Gaps = 5/237 (2%)
Query: 414 IYNRTGQYNETVKLLSQLERP-DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y G+ + ++ + P ++V+W +I A A +G + E ++LF + + D
Sbjct: 1 MYRICGRLEDARRIFREFHSPSNVVTWTGIITANAESGHFSEAIDLFHRTQLEGVLLDKT 60
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+F+++++AC+ NL G L+++ + +D + N L++MYG C S+ + +F+
Sbjct: 61 SFLAVVNACADCGNLVAGRLAQRLVREAGL-EADVVLGNTLVNMYGLCHSVDEACSVFDS 119
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ +R ++W ++SA G Q +L FR M+ GFKP+ + +AVL +C G + G
Sbjct: 120 IQERTSVSWNVMLSAHARQGNFQMSLIVFRLMQLDGFKPEAITFLAVLESCAAVGSLETG 179
Query: 593 MELFERMNRSYG-VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ + G ++P++ VV++ + G ++EA ++ + + W + +
Sbjct: 180 KLVHSNIQEQIGELDPQVG--DAVVNMYGKCGAVEEAARVFDEQGHRRSVVSWNSMI 234
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/506 (28%), Positives = 261/506 (51%), Gaps = 8/506 (1%)
Query: 153 NEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY-FQCAGIWSAEKMFKDVEIRDVVSWN 211
N + +++H +I+ + + + ++ Y + A +F +E +V WN
Sbjct: 26 NSISTDTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWN 85
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
+I L++S++ +A+ +Y RM + N T +++ +CA + + + G+ IH +K
Sbjct: 86 HMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKL 145
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI 331
E +FV +AL+ YA C L A F + ++++VSWN LI GY+ + + L
Sbjct: 146 GFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLF 205
Query: 332 ELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY----EYVLGSLMTSYAKS 386
+ + + + T ++ + + +++ EN Y+ +L+ Y +
Sbjct: 206 DAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRR 265
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
L A + R +V N + + + G KL + + D++SW +I
Sbjct: 266 SLAELAQGVFDRMR-ERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGY 324
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
+ + + ++LF+ M AA++ PD T S+LSAC+ L L +G ++H I++ + +D
Sbjct: 325 SQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRR-HGVQAD 383
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
+V N LIDMY KCG + ++++F+ M D++ ++WT++IS L +NGFA AL+ F +M
Sbjct: 384 IYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLR 443
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
G +P + +L AC H GLV +G+E FE M +G+ P M HY CVVDLL R G++
Sbjct: 444 EGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNID 503
Query: 627 EAEKIITTMPFPPNALIWRTFLEGCQ 652
+A + I MP P+ ++WR L C+
Sbjct: 504 KAYEFIKKMPIVPDVVVWRILLSACK 529
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 133/541 (24%), Positives = 257/541 (47%), Gaps = 34/541 (6%)
Query: 46 GLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGC-LDEVVSVFEDMPRK 104
G +S +S++ +L A +++ L D F+ + ++ Y L + VF +
Sbjct: 21 GRVSKNSISTDTSKELHAHLIRTQLH-TDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECP 79
Query: 105 SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIH 164
+LV WN ++ + + + ++ + + + + + + D+ G +IH
Sbjct: 80 TLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIH 139
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
+K GF+ L V+N+L++MY C + A+KMF + RD+VSWNT+I ++ +
Sbjct: 140 VHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYK 199
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
+ L L+ M+ + + T V +I +C+ L + S+ + +N LE DV++G+ L+
Sbjct: 200 EVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLI 259
Query: 285 DFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ----LGYRP 340
D Y + E A F + +NIVSWNAL++G+A + T+ L + + + +
Sbjct: 260 DMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTS 319
Query: 341 NEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
+S + S A +L Q ++ + + + S++++ A G + + +
Sbjct: 320 MITGYSQASQFSDAVKLFQ---EMMAAKVKPDKVTVASVLSACAHLGKLD--VGWAVHHY 374
Query: 401 IPRAVVPANIIAG-----IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
I R V A+I G +Y + G + +++ +++ D VSW VI+ A NG
Sbjct: 375 IRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSA 434
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSK--LCNLALG-----SSLHGLIKKTEIISSDTF 508
L+LF M + P + TFV +L AC+ L N L S+HGL+ + +
Sbjct: 435 LDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMK-----HY 489
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREM 564
C ++D+ + G+I + + +M +V+ W L+SA L+G A+ A ++ E+
Sbjct: 490 GC--VVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLEL 547
Query: 565 E 565
+
Sbjct: 548 D 548
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 142/306 (46%), Gaps = 43/306 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGG-LLSCDSLNPVEGA 59
M DR++VS+N++I YS+ ++ LR+F M + T +L+C L E A
Sbjct: 177 MLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFA 236
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRH------------------------------- 88
+K D ++G L+ +YGR
Sbjct: 237 DSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKV 296
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI 148
G L +F++MP++ +++W S+++ + + D + LF E++ ++V + + V+
Sbjct: 297 GNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVL 356
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
++ L+ G +H + ++G ++ V NSL++MY +C + A ++F ++ +D V
Sbjct: 357 SACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSV 416
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SW ++I LA + AL+L+ +M + V P TFV ++ +CA HA +
Sbjct: 417 SWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACA-----------HAGL 465
Query: 269 IKNALE 274
+ LE
Sbjct: 466 VNKGLE 471
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 117/226 (51%), Gaps = 17/226 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+V+S+ S+I+ YS+ DA+++F M+ +P + T +LS C L ++ G
Sbjct: 309 MPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVG 368
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + ++G+ AD +VG +L+ +Y + G +++ + VF M K V+W S++S
Sbjct: 369 WAVHHYIRRHGV-QADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAV 427
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVI-----HGLSNE--QDLEFGEQIHGLVIKNG 171
+GF + LF +++R V T +FVG++ GL N+ + E E +HGLV
Sbjct: 428 NGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVP--- 484
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI-RDVVSWNTIIGA 216
+ +V++ + I A + K + I DVV W ++ A
Sbjct: 485 ---AMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSA 527
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGG-LLSCDSLNPV-EG 58
M D++ VS+ S+IS + G+ AL +F M+ G +PT TF G LL+C V +G
Sbjct: 410 MKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKG 469
Query: 59 AQLQASVLK-NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIF 116
+ S+ +GL A G ++ L R G +D+ + MP +V W ++S
Sbjct: 470 LEYFESMESVHGLVPAMKHYG-CVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSAC 528
Query: 117 GKHGFV 122
HG V
Sbjct: 529 KLHGNV 534
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 178/603 (29%), Positives = 295/603 (48%), Gaps = 41/603 (6%)
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYG----RHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
A+L +++ L +D+FV L+ L RH + VF+ M + + WN ++
Sbjct: 34 AELHGRLVRAHL-TSDSFVAGRLIALLASPAARHD-MRYARKVFDGMAQPNAFVWNCMIR 91
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF---GEQIHGLVIKNG 171
+ D + +F E+ R V+ + V+ + L++ G+ IH LV + G
Sbjct: 92 GYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIG 151
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
F ++ V + LVN Y + A K+F+++ RDVVSW ++I A A+ ++ K L++
Sbjct: 152 FTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLS 211
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
M + + PN+ T + ++++C Q G+ ++ +V K +E DV + +AL+ Y KC
Sbjct: 212 EMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCG 271
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLR 350
L A F + + SWN LI G+ + ++ + E+L G P+ T VL
Sbjct: 272 CLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVL- 330
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
S QL +L R G + Y+ +G+ D + N
Sbjct: 331 -SACAQLGEL-----RKGMHVHSYI--------KDNGICCDN-------------ILTNS 363
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ +Y + G ++ + + D+VSW +++ + LF+ M+ A +
Sbjct: 364 LINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAH 423
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
VSLLSACS+L L G +H I++ + + D + + L+DMY KCG I ++ +IF
Sbjct: 424 EMALVSLLSACSQLGALDKGREIHSYIEEMNV-AKDLCLESALVDMYAKCGCIDTASEIF 482
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLV 589
+M + ++W A+I L NG+ + A+E F +M E KPD + L AVL AC H G+V
Sbjct: 483 RKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMV 542
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG+ F M+ S GV P+ +HY C+VDLL R G L EA I MP PN +IW + L
Sbjct: 543 DEGLRYFYLMS-SLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLA 601
Query: 650 GCQ 652
C+
Sbjct: 602 ACR 604
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/557 (23%), Positives = 254/557 (45%), Gaps = 42/557 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP----- 55
M N +N +I YS C DAL +F M RG P +T ++S +
Sbjct: 78 MAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWR 137
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G + A V + G F +D FV + L+ YG + E VFE+M + +V+W S++S
Sbjct: 138 SNGDAIHALVRRIG-FTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISA 196
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ G + + + E+ + + + + ++ Q ++ G ++ V K G + +
Sbjct: 197 CAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEAD 256
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ + N+L++MY +C + A + F+ + R SWNT+I ++ +AL ++ M +
Sbjct: 257 VDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLL 316
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V P+ T V V+++CA L G +H+ + N + CD + ++L++ YAKC ++
Sbjct: 317 HGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAA 376
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
A F ++ K++VSW ++ GY T F L E E + V+
Sbjct: 377 AERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFE---------EMKIAEVV------ 421
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL---AFVTALNIPRAVVPANIIA 412
+E L SL+++ ++ G + +++ +N+ + + + +
Sbjct: 422 ---------------AHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALV 466
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDN 471
+Y + G + ++ +++ +SWN +I A NG KE +ELF M PD
Sbjct: 467 DMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDG 526
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
T ++L AC+ + + G L+ ++ DT ++D+ G+ G + +
Sbjct: 527 ITLKAVLGACAHVGMVDEGLRYFYLMSSLGVV-PDTEHYGCIVDLLGRAGMLDEAFHFIK 585
Query: 532 EMT-DRNVITWTALISA 547
+M + N + W +L++A
Sbjct: 586 KMPIEPNPVIWGSLLAA 602
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 178/603 (29%), Positives = 295/603 (48%), Gaps = 41/603 (6%)
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYG----RHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
A+L +++ L +D+FV L+ L RH + VF+ M + + WN ++
Sbjct: 34 AELHGRLVRAHL-TSDSFVAGRLIALLASPAARHD-MRYARKVFDGMAQPNAFVWNCMIR 91
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF---GEQIHGLVIKNG 171
+ D + +F E+ R V+ + V+ + L++ G+ IH LV + G
Sbjct: 92 GYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIG 151
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
F ++ V + LVN Y + A K+F+++ RDVVSW ++I A A+ ++ K L++
Sbjct: 152 FTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLS 211
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
M + + PN+ T + ++++C Q G+ ++ +V K +E DV + +AL+ Y KC
Sbjct: 212 EMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCG 271
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLR 350
L A F + + SWN LI G+ + ++ + E+L G P+ T VL
Sbjct: 272 CLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVL- 330
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
S QL +L R G + Y+ +G+ D + N
Sbjct: 331 -SACAQLGEL-----RKGMHVHSYI--------KDNGICCDN-------------ILTNS 363
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ +Y + G ++ + + D+VSW +++ + LF+ M+ A +
Sbjct: 364 LINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAH 423
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
VSLLSACS+L L G +H I++ + + D + + L+DMY KCG I ++ +IF
Sbjct: 424 EMALVSLLSACSQLGALDKGREIHSYIEEMNV-AKDLCLESALVDMYAKCGCIDTASEIF 482
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLV 589
+M + ++W A+I L NG+ + A+E F +M E KPD + L AVL AC H G+V
Sbjct: 483 RKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMV 542
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG+ F M+ S GV P+ +HY C+VDLL R G L EA I MP PN +IW + L
Sbjct: 543 DEGLRYFYLMS-SLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLA 601
Query: 650 GCQ 652
C+
Sbjct: 602 ACR 604
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 131/557 (23%), Positives = 255/557 (45%), Gaps = 42/557 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP----- 55
M N +N +I YS C DAL +F M RG P +T ++S +
Sbjct: 78 MAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWR 137
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G + A V + G F +D FV + L+ YG ++E VFE+M + +V+W S++S
Sbjct: 138 SNGDAIHALVRRIG-FTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISA 196
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ G + + + E+ + + + + ++ Q ++ G ++ V K G + +
Sbjct: 197 CAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEAD 256
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ + N+L++MY +C + A + F+ + R SWNT+I ++ +AL ++ M +
Sbjct: 257 VDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLL 316
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V P+ T V V+++CA L G +H+ + N + CD + ++L++ YAKC ++
Sbjct: 317 HGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAA 376
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
A F ++ K++VSW ++ GY T F L E E + V+
Sbjct: 377 AERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFE---------EMKIAEVV------ 421
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL---AFVTALNIPRAVVPANIIA 412
+E L SL+++ ++ G + +++ +N+ + + + +
Sbjct: 422 ---------------AHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALV 466
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDN 471
+Y + G + ++ +++ +SWN +I A NG KE +ELF M PD
Sbjct: 467 DMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDG 526
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
T ++L AC+ + + G L+ ++ DT ++D+ G+ G + +
Sbjct: 527 ITLKAVLGACAHVGMVDEGLRYFYLMSSLGVV-PDTEHYGCIVDLLGRAGMLDEAFHFIK 585
Query: 532 EMT-DRNVITWTALISA 547
+M + N + W +L++A
Sbjct: 586 KMPIEPNPVIWGSLLAA 602
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 175/606 (28%), Positives = 303/606 (50%), Gaps = 46/606 (7%)
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+QL + LK GL D+F+ T L LY R+ + +F++ P +++ WN+++ +
Sbjct: 156 SQLHSQCLKAGL-VHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCF 214
Query: 119 HGFVEDCMFLFCELVR-SEVALTES----SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
G + + LF ++ S V++ E S + + + L G+ IHG + K D
Sbjct: 215 EGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRID 274
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
++ V ++L+++Y +C + A K+F + DVV W +II +S + AL + RM
Sbjct: 275 GDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRM 334
Query: 234 SV-DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
V + V P+ T V V ++CA L N LG+S+H V + L+ + + ++L+ Y K +
Sbjct: 335 VVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGS 394
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRS 351
++ A F E+S+K+I+SW+ ++ YA + T + L E+L +PN T VLR+
Sbjct: 395 IKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRA 454
Query: 352 SLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
L+ +H L + G+E V +LM Y K P
Sbjct: 455 CACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMK------------------CFSP 496
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+ V L +++ + D+++W ++ + A NG E + +F+ M ++
Sbjct: 497 --------------EKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGT 542
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD V +L+ S+L L LH + K ++ F+ LI++Y KC SI +
Sbjct: 543 RPDAIALVKILTTISELGILQQAVCLHAFVIKNG-FENNQFIGASLIEVYAKCSSIEDAN 601
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACRHG 586
K+F MT ++V+TW+++I+A G +G + AL+ F +M KP+ V I++L+AC H
Sbjct: 602 KVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHS 661
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
GL++EG+ +F+ M Y ++P +HY +VDLL R G L A +I MP IW
Sbjct: 662 GLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGA 721
Query: 647 FLEGCQ 652
L C+
Sbjct: 722 LLGACR 727
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 250/507 (49%), Gaps = 19/507 (3%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGF-----EPTQFTFG-GLLSCDSLNP 55
P R V +N+++ +Y G + L +F M N P ++ L SC L
Sbjct: 198 PHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRK 257
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
+ ++ LK D FVG+AL+ LY + G +++ V VF + P+ +V W SI+S
Sbjct: 258 LLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISG 317
Query: 116 FGKHGFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + G E + F +V SE V+ + V V + + + G +HG V + G D
Sbjct: 318 YEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDN 377
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+L +ANSL+++Y + I +A +F+++ +D++SW+T++ A++ L+L+ M
Sbjct: 378 KLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEML 437
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ PN T V V+ +CA + N G IH + E + V +AL+D Y KC + E
Sbjct: 438 DKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPE 497
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F+ + K++++W L GYA S+++ +L G RP+ +L +
Sbjct: 498 KAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTIS 557
Query: 354 AFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+LQ LH +I+ G+EN +++ SL+ YAK I DA + V ++
Sbjct: 558 ELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSS 617
Query: 410 IIAGIYNRTGQYNETVKLLSQL-----ERPDIVSWNIVIAACAHNGDYKEVLELFKYM-R 463
IIA Y GQ E +KL Q+ +P+ V++ +++AC+H+G KE + +F M
Sbjct: 618 IIAA-YGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVN 676
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALG 490
++ P++ + ++ ++ L +
Sbjct: 677 KYKLKPNSEHYAIMVDLLGRMGELDMA 703
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 87/156 (55%), Gaps = 4/156 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVEGA 59
MP ++V+++ + S Y+ G V +++ +F M++ G P +L+ S L ++ A
Sbjct: 506 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 565
Query: 60 Q-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L A V+KNG F + F+G +L+ +Y + +++ VF+ M K +VTW+SI++ +G
Sbjct: 566 VCLHAFVIKNG-FENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGF 624
Query: 119 HGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSN 153
HG E+ + LF ++ S+ +F+ ++ S+
Sbjct: 625 HGQGEEALKLFYQMANHSDTKPNNVTFISILSACSH 660
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 21/117 (17%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLLSCDSLNPVEGA 59
M ++VV+++SII+AY G E+AL++F M N +P TF +LS S
Sbjct: 607 MTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACS------- 659
Query: 60 QLQASVLKNGLFCADAFVG-----------TALLGLYGRHGCLDEVVSVFEDMPRKS 105
+ ++K G+ D V ++ L GR G LD + V +MP ++
Sbjct: 660 --HSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQA 714
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 165/564 (29%), Positives = 284/564 (50%), Gaps = 41/564 (7%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F++ P++ L N ++ F ++ ++ + LF L RS SS V+ D
Sbjct: 48 LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
G+Q+H IK GF ++ V SLV+MY + + E++F ++ +++VVSW +++
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
++ +AL+L+ +M ++ + PN TF V+ A G +H VIK+ L+
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
+FVG+++V+ Y+K + A F + N+N VSWN++I G+ + F L ++L
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287
Query: 337 -GYRPNEFTFSHVLR-----SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
G + + F+ V++ ++F QLHC +I+ G + + +LM +Y+K I
Sbjct: 288 EGVKLTQTIFATVIKLCANIKEMSFAK-QLHCQVIKNGSDFDLNIKTALMVAYSKCSEID 346
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
DA ++ G+ N +VSW +I+ NG
Sbjct: 347 DAFKLFCMMH------------GVQN-------------------VVSWTAIISGYVQNG 375
Query: 451 DYKEVLELFKYMRAAR-IYPDNYTFVSLLSACS-KLCNLALGSSLHGLIKKTEIISSDTF 508
+ LF MR + P+ +TF S+L+AC+ ++ G H K+ S+
Sbjct: 376 RTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGF-SNALC 434
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V + L+ MY K G+I S+ ++F DR++++W ++IS +G +++L+ F EM
Sbjct: 435 VSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKN 494
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
+ D + I V++AC H GLV EG F+ M + Y + P M+HY C+VDL R G L++A
Sbjct: 495 LELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKA 554
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
+I MPFP A IWRT L C+
Sbjct: 555 MDLINKMPFPAGATIWRTLLAACR 578
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 165/563 (29%), Positives = 283/563 (50%), Gaps = 56/563 (9%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS------LNP 55
P + + N ++ +SR ++AL +FL + R PT G LSC +
Sbjct: 53 PQQGLSRNNHLLFEFSRNDQNKEALNLFLGL-RRSGSPTD---GSSLSCVLKVCGCLFDR 108
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
+ G Q+ +K G F D VGT+L+ +Y + +++ VF++M K++V+W S+++
Sbjct: 109 IVGKQVHCQCIKCG-FVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ ++G E + LF ++ + +F V+ GL+ + +E G Q+H +VIK+G D
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V NS+VNMY + + A+ +F +E R+ VSWN++I + +A EL+ RM +
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ V QT F VI CA ++ K +H +VIKN + D+ + +AL+ Y+KC ++
Sbjct: 288 EGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDD 347
Query: 296 AHLCFSEISN-KNIVSWNALILGYASKS-SPTSIFLLIEL-LQLGYRPNEFTFSHVLRSS 352
A F + +N+VSW A+I GY + ++ L ++ + G PNEFTFS VL +
Sbjct: 348 AFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNAC 407
Query: 353 LA-----FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
A Q Q H I+ G+ N V +L+T YAK G I A
Sbjct: 408 AAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESA--------------- 452
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
NE K Q++R D+VSWN +I+ A +G K+ L++F+ MR+ +
Sbjct: 453 --------------NEVFK--RQVDR-DLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNL 495
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGL-IKKTEIISS-DTFVCNMLIDMYGKCGSIGS 525
D TF+ ++SAC+ + G L +K I+ + + + C ++D+Y + G +
Sbjct: 496 ELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSC--MVDLYSRAGMLEK 553
Query: 526 SVKIFNEMT-DRNVITWTALISA 547
++ + N+M W L++A
Sbjct: 554 AMDLINKMPFPAGATIWRTLLAA 576
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 158/309 (51%), Gaps = 21/309 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M +RN VS+NS+I+ + G +A +F M G + TQ F ++ C ++ + A
Sbjct: 254 MENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFA 313
Query: 60 -QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-KSLVTWNSIVSIFG 117
QL V+KNG D + TAL+ Y + +D+ +F M +++V+W +I+S +
Sbjct: 314 KQLHCQVIKNGSD-FDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYV 372
Query: 118 KHGFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQ-DLEFGEQIHGLVIKNGFDYE 175
++G + M LFC++ R E V E +F V++ + +E G+Q H IK+GF
Sbjct: 373 QNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNA 432
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L V+++LV MY + I SA ++FK RD+VSWN++I A+ K+L+++ M
Sbjct: 433 LCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRS 492
Query: 236 DIVFPNQTTFVYVINSC--AGLQN------SILGKSIHAKVIKNALECDVFVGSALVDFY 287
+ + TF+ VI++C AGL N ++ K H C +VD Y
Sbjct: 493 KNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSC-------MVDLY 545
Query: 288 AKCDNLEGA 296
++ LE A
Sbjct: 546 SRAGMLEKA 554
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 171/619 (27%), Positives = 298/619 (48%), Gaps = 49/619 (7%)
Query: 37 FEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS 96
F+ + L C L V Q+ + +G A+ F+G ++ YG+ G +
Sbjct: 24 FDSSGHYRDALRQCQDLESVR--QIHDRI--SGAASANVFLGNEIVRAYGKCGSVASARV 79
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
F+ + RK+ +W S+++ + ++G + L+ R ++ + V+ ++ +
Sbjct: 80 AFDAIARKNDYSWGSMLTAYAQNGHYRAALDLY---KRMDLQPNPVVYTTVLGACASIEA 136
Query: 157 LEFGEQIHGLVI-KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTII 214
LE G+ IH + G ++++ NSL+ MY +C + A+++F+ + R V SWN +I
Sbjct: 137 LEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMI 196
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
A A+S +F +A+ LY M V+ P+ TF V+++C+ L G+ IHA + E
Sbjct: 197 AAYAQSGHFEEAIRLYEDMDVE---PSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTE 253
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
D+ + +AL+ YA+C L+ A F + +++VSW+A+I +A +
Sbjct: 254 LDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKM 313
Query: 335 QL-GYRPNEFTFSHVLRSSLAFQLLQLHCLII---RMGYENYEYVLGSLMTSYAKSGLIS 390
QL G RPN +TF+ VL L C + R G ++ +LG+
Sbjct: 314 QLEGVRPNYYTFASVL----------LACASVGDLRAGRAVHDQILGN------------ 351
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
+V + +Y G +E L Q+E D W ++I + G
Sbjct: 352 ---------GYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQG 402
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVS-LLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
VLEL++ M+ P S ++SAC+ L A H I+ +IS D +
Sbjct: 403 HRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMIS-DFVL 461
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
L++MY + G++ S+ ++F++M+ R+ + WT LI+ +G AL ++EME G
Sbjct: 462 ATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGA 521
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
+P + + VL AC H GL +G +LF + Y + P + HY C++DLL R G L +AE
Sbjct: 522 EPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAE 581
Query: 630 KIITTMPFPPNALIWRTFL 648
++I MP PN + W + L
Sbjct: 582 ELINAMPVEPNDVTWSSLL 600
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 143/564 (25%), Positives = 275/564 (48%), Gaps = 48/564 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
+N S+ S+++AY++ G+ AL ++ M +P + +L +C S+ +E G +
Sbjct: 87 KNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAI 143
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKHG 120
+ + D + +LL +Y + G L++ +FE M R+S+ +WN++++ + + G
Sbjct: 144 HSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSG 203
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
E+ + L+ ++ +V + +F V+ SN L+ G +IH L+ G + +L + N
Sbjct: 204 HFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQN 260
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L+ MY +C + A K+F+ + RDVVSW+ +I A AE++ F +A+E Y +M ++ V P
Sbjct: 261 ALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRP 320
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N TF V+ +CA + + G+++H +++ N + + G+ALVD Y +L+ A F
Sbjct: 321 NYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLF 380
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
+I N++ W LI GY+ + T + L YR + T + V + + + +
Sbjct: 381 DQIENRDEGLWTVLIGGYSKQGHRTGVLEL-------YREMKNT-TKVPATKIIYSCVIS 432
Query: 361 HCLII------RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
C + R + + E G+ISD V A + +
Sbjct: 433 ACASLGAFADARQAHSDIE-----------ADGMISD-------------FVLATSLVNM 468
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y+R G ++ ++ D ++W +IA A +G++ L L+K M P TF
Sbjct: 469 YSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTF 528
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM- 533
+ +L ACS G L I+ + + + +ID+ + G + + ++ N M
Sbjct: 529 MVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMP 588
Query: 534 TDRNVITWTALISALGLNGFAQRA 557
+ N +TW++L+ A ++ +RA
Sbjct: 589 VEPNDVTWSSLLGASRIHKDVKRA 612
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 162/322 (50%), Gaps = 10/322 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGG-LLSCDSLNPVE-G 58
+P R+VVS++++I+A++ ++A+ + M G P +TF LL+C S+ + G
Sbjct: 282 LPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAG 341
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +L NG + GTAL+ LY +G LDE S+F+ + + W ++ + K
Sbjct: 342 RAVHDQILGNG-YKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSK 400
Query: 119 HGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + L+ E+ ++V T+ + VI ++ Q H + +G + +
Sbjct: 401 QGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFV 460
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+A SLVNMY + + SA ++F + RD ++W T+I A+ G AL LY M ++
Sbjct: 461 LATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEG 520
Query: 238 VFPNQTTFVYVINSC--AGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLE 294
P++ TF+ V+ +C AGLQ GK + + + A+ ++ S ++D ++ L
Sbjct: 521 AEPSELTFMVVLYACSHAGLQEQ--GKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLS 578
Query: 295 GAHLCFSEIS-NKNIVSWNALI 315
A + + N V+W++L+
Sbjct: 579 DAEELINAMPVEPNDVTWSSLL 600
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 168/565 (29%), Positives = 285/565 (50%), Gaps = 40/565 (7%)
Query: 97 VFEDMPR--KSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE 154
VF+ MP K++V WN ++ + +G E+ + L+ +++ + +F V+ S
Sbjct: 73 VFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSAL 132
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
++ G +IH + + + + V+ +LV+ Y +C + A+++F + RDVV+WN++I
Sbjct: 133 KEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMI 192
Query: 215 GALAESE-NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
+ E ++ + L ++M D V PN +T V V+ + A + + GK IH ++
Sbjct: 193 SGFSLHEGSYDEVARLLVQMQND-VSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGF 251
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEIS-NKNIVSWNALILGYA-SKSSPTSIFLLI 331
DV VG+ ++D Y KC ++ A F + KN V+W+A++ Y ++ L
Sbjct: 252 VGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFC 311
Query: 332 ELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLIS 390
+LL L + + S V ++ +IR+ + G+ + YA KSG +
Sbjct: 312 QLLML--KDDVIVLSAVTLAT-----------VIRVCANLTDLSTGTCLHCYAIKSGFVL 358
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
D + N + +Y + G N ++ ++++ D VS+ +I+ NG
Sbjct: 359 DLMV-------------GNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNG 405
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII---SSDT 507
+ +E L +F M+ + I P+ T S+L AC+ L L GS H II ++DT
Sbjct: 406 NSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCY----AIICGFTADT 461
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
+CN LIDMY KCG I ++ K+F+ M R +++W +I A G++G AL F M+
Sbjct: 462 MICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSE 521
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G KPD V I +++AC H GLV EG F M + +G+ P M+HY C+VDLL R G KE
Sbjct: 522 GLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKE 581
Query: 628 AEKIITTMPFPPNALIWRTFLEGCQ 652
I MP P+ +W L C+
Sbjct: 582 VHSFIEKMPLEPDVRVWGALLSACR 606
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 159/564 (28%), Positives = 278/564 (49%), Gaps = 53/564 (9%)
Query: 1 MPDR--NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV- 56
MP R NVV +N +I AY+ G E+A+ ++ M+ G P +FTF +L +C +L
Sbjct: 77 MPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEAS 136
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
EG ++ + + L ++ +V TAL+ Y + GCLD+ VF+ M ++ +V WNS++S F
Sbjct: 137 EGREIHCDIKRLRLE-SNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGF 195
Query: 117 GKH-GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
H G ++ L ++ +++V+ S+ VGV+ ++ L G++IHG ++ GF +
Sbjct: 196 SLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGD 254
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEI-RDVVSWNTIIGALAESENFGKALELY---L 231
++V ++++Y +C I A ++F + I ++ V+W+ ++GA + +ALEL+ L
Sbjct: 255 VVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLL 314
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
+ D++ + T VI CA L + G +H IK+ D+ VG+ L+ YAKC
Sbjct: 315 MLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCG 374
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLR 350
+ GA F+E+ ++ VS+ A+I GY +S + + +E+ G P + T + VL
Sbjct: 375 IINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLP 434
Query: 351 SSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+ L HC I G+ + +L+ YAK G I A
Sbjct: 435 ACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTAR------------- 481
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
K+ ++ + IVSWN +I A +G E L LF M++
Sbjct: 482 -------------------KVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEG 522
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSS-LHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIG 524
+ PD+ TF+ L+SACS +A G + + + II + + C ++D+ + G
Sbjct: 523 LKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYAC--MVDLLSRAGLFK 580
Query: 525 SSVKIFNEMT-DRNVITWTALISA 547
+M + +V W AL+SA
Sbjct: 581 EVHSFIEKMPLEPDVRVWGALLSA 604
>gi|222630191|gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
Length = 591
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 256/532 (48%), Gaps = 54/532 (10%)
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL----------LVA-NSLVNMYF 187
L + F G++ E DL G +H V+KN + L LVA NSLV+MY
Sbjct: 9 LNYARFSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYA 68
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFV 246
+C A ++F ++ +RD VSWN++I A S G AL L+ RM D ++ TF
Sbjct: 69 RCGRREDAARVFDEMRVRDAVSWNSLIAA---SRGAGDALALFRRMLRSDARACDRATFT 125
Query: 247 YVINSCA--GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
V++ CA G + +H V+ E +V VG+ALV Y +C + A F ++
Sbjct: 126 TVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMA 185
Query: 305 NKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLLQL 360
KN+++W A+I G A F L + N T+S L RS A + Q+
Sbjct: 186 EKNVITWTAMISGMARAELYKESFSLFGQMIRTVDANNATYSCALLACARSLAAREGQQV 245
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H L+++ G+E+ +V LM Y+K GL+ DAL
Sbjct: 246 HGLVVKAGFEDDLHVESGLMDVYSKCGLMEDAL--------------------------- 278
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+ PD V +++ A NG ++ ELF M A D T ++L A
Sbjct: 279 -----TVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSAVLGA 333
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
ALG +H L+ K +T+VCN L++MY KCG + SV++F+EM +N ++
Sbjct: 334 FGASAPFALGKQIHALVIK-RCFGVNTYVCNGLVNMYSKCGELRESVRVFDEMPSKNSVS 392
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W ++I+A +G + F M+ G KP V +++L AC H G ++G+E+ M+
Sbjct: 393 WNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMS 452
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
YGV P M+HY CVVD+L R G L +A+ I PF NAL+W+ + C
Sbjct: 453 SQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDNALLWQALMGACS 504
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 155/567 (27%), Positives = 265/567 (46%), Gaps = 75/567 (13%)
Query: 44 FGGLL-SCDSLNPVE-GAQLQASVLKNGL---FCADA-------FVGTALLGLYGRHGCL 91
F GLL SC + GA L A+V+KN CA +L+ +Y R G
Sbjct: 14 FSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYARCGRR 73
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEV-ALTESSFVGVIH- 149
++ VF++M + V+WNS+++ G D + LF ++RS+ A ++F V+
Sbjct: 74 EDAARVFDEMRVRDAVSWNSLIAASRGAG---DALALFRRMLRSDARACDRATFTTVLSE 130
Query: 150 -GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
+ L +HGLV+ GF+ E+ V N+LV YF+C SAE++F + ++V+
Sbjct: 131 CARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVI 190
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
+W +I +A +E + ++ L+ +M + V N T+ + +CA + G+ +H V
Sbjct: 191 TWTAMISGMARAELYKESFSLFGQM-IRTVDANNATYSCALLACARSLAAREGQQVHGLV 249
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
+K E D+ V S L+D Y+KC +E A F + V +++G+A F
Sbjct: 250 VKAGFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAF 309
Query: 329 -LLIELLQLGYRPNEFTFSHVL---RSSLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSY 383
L E++ G +E T S VL +S F L Q+H L+I+ + YV L+
Sbjct: 310 ELFAEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVN-- 367
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
+Y++ G+ E+V++ ++ + VSWN +I
Sbjct: 368 ------------------------------MYSKCGELRESVRVFDEMPSKNSVSWNSII 397
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG-------SSLHGL 496
AA A +G EV +LF+ M+A P + TF+SLL ACS + + G SS +G+
Sbjct: 398 AAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGV 457
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE--MTDRNVITWTALISALGLNGFA 554
+ + E + C ++DM G+ G + + + TD N + W AL+ A +G +
Sbjct: 458 LPRME-----HYAC--VVDMLGRAGLLDDAKSFIEDGPFTD-NALLWQALMGACSFHGNS 509
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLT 581
+ + K+ + L P A +L+
Sbjct: 510 E--VGKYAAEKLLLLDPSCTAAYVLLS 534
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 135/266 (50%), Gaps = 4/266 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSC-DSLNPVEG 58
M ++NV+++ ++IS +R +++ +F MI R + T+ LL+C SL EG
Sbjct: 184 MAEKNVITWTAMISGMARAELYKESFSLFGQMI-RTVDANNATYSCALLACARSLAAREG 242
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ V+K G F D V + L+ +Y + G +++ ++VF V I+ F +
Sbjct: 243 QQVHGLVVKAG-FEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQ 301
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G E LF E+V + + E++ V+ G+QIH LVIK F V
Sbjct: 302 NGLEEKAFELFAEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYV 361
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N LVNMY +C + + ++F ++ ++ VSWN+II A A + + +L+ M D
Sbjct: 362 CNGLVNMYSKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGA 421
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSI 264
P TF+ ++++C+ + ++ G I
Sbjct: 422 KPTDVTFLSLLHACSHVGSAKKGLEI 447
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP +N VS+NSII+A++R G+ + ++F M G +PT TF LL +C + + G
Sbjct: 385 MPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKG 444
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
++ S+ ++ + GR G LD+ S ED P + + W +++
Sbjct: 445 LEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDNALLWQALMGACS 504
Query: 118 KHGFVE 123
HG E
Sbjct: 505 FHGNSE 510
>gi|449496714|ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11290-like [Cucumis sativus]
Length = 616
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 269/547 (49%), Gaps = 40/547 (7%)
Query: 111 SIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
SI + H V D FL +L+R T I + L+FG Q+H +IK
Sbjct: 40 SIKPLLQTHNVV-DIQFLV-QLLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKL 97
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
GF + +LV+MY +C I A K+F ++ VV+WN+++ ++ A+ L+
Sbjct: 98 GFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLF 157
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
L M + P + + C+ LQ LG +HA +K +V VG+ L+D Y+KC
Sbjct: 158 LEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKC 217
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVL 349
NL+ + F + NKN+ +W ++I GYA P ++ L+ E+L L PN T++ +L
Sbjct: 218 CNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMXLMREMLHLNLEPNGMTYNSLL 277
Query: 350 RSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
S + Q+HC II GYE+ Y+ +L+T+Y++
Sbjct: 278 SSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSEC------------------- 318
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
G + K+ S + D +SWN VIA + G +E LE F MR
Sbjct: 319 ------------CGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRRE 366
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ D +TF S+ A L G +HGL+ KT + + V N L+ MY + G+I
Sbjct: 367 KFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTG-YTLNLSVQNGLVSMYARSGAIRD 425
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
S +F+ M + ++I+W +L+S +G + A++ F +M KPD + +AVLTAC H
Sbjct: 426 SKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSH 485
Query: 586 GGLVREGMELFERMNRSYGVE-PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
GL+ +G+E F+ M S VE P+++HY +VDL R G L EAE I ++P P I+
Sbjct: 486 VGLLDKGLEYFKLMRNSELVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIY 545
Query: 645 RTFLEGC 651
+ L C
Sbjct: 546 KALLSAC 552
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 137/562 (24%), Positives = 270/562 (48%), Gaps = 49/562 (8%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ ++++K G F + ++ TAL+ +YG+ + + VF++M S+VTWNS+V+ +
Sbjct: 87 GIQVHSTIIKLG-FSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYL 145
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G+ + LF E+++ + T S G + G S Q + G Q+H + +K F ++
Sbjct: 146 QAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVV 205
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V L++MY +C + + ++F + ++V +W ++I A ++ +A+ L M
Sbjct: 206 VGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMXLMREMLHLN 265
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK-CDNLEGA 296
+ PN T+ +++S + ++ K IH ++I E + ++ LV Y++ C +LE
Sbjct: 266 LEPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDY 325
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLR----S 351
S I + +SWNA+I G+ + ++ I++ + + + FTF+ + + +
Sbjct: 326 RKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMT 385
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
S + Q+H L+ + GY V L++ YA+SG I D+ + +N
Sbjct: 386 SALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMN----------- 434
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
D++SWN +++ CA++G +E ++LF+ MR I PDN
Sbjct: 435 ---------------------EHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDN 473
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV-CNMLIDMYGKCGSIGSSVKIF 530
+F+++L+ACS + L G L++ +E++ L+D++G+ G + +
Sbjct: 474 TSFLAVLTACSHVGLLDKGLEYFKLMRNSELVEPPKLEHYATLVDLFGRAGKLYEAEAFI 533
Query: 531 NEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
+ + + + AL+SA ++G A R +K E+ + D I + A
Sbjct: 534 ESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLEL----YPYDPATYIMLSNALGRD 589
Query: 587 GLVREGMELFERM-NRSYGVEP 607
G + + M NR EP
Sbjct: 590 GYWDDAASIRRLMSNRGVKKEP 611
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/487 (24%), Positives = 222/487 (45%), Gaps = 55/487 (11%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-GAQLQ 62
+VV++NS+++ Y + GY A+ +FL M+ +G EPT F+ GGL+ C L + G+QL
Sbjct: 133 SVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLH 192
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
A LK F ++ VGT L+ +Y + L + VF+ M K++ TW S++S + ++
Sbjct: 193 AMSLKLR-FSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLP 251
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ M L E++ + ++ ++ S + + +QIH +I G++ +A +L
Sbjct: 252 HEAMXLMREMLHLNLEPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTL 311
Query: 183 VNMYFQCAG-IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM---SVDIV 238
V Y +C G + K+ ++ + D +SWN +I +ALE +++M D+
Sbjct: 312 VTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVD 371
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
F T+ I + L+ GK IH V K ++ V + LV YA+ + + +
Sbjct: 372 FFTFTSIFKAIGMTSALEE---GKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKM 428
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
FS ++ +++SWN+L+ G A +I L ++ + +P+ +F VL
Sbjct: 429 VFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVL-------- 480
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI-----IA 412
T+ + GL+ L + + V P + +
Sbjct: 481 -----------------------TACSHVGLLDKGLEYFKLMRNSELVEPPKLEHYATLV 517
Query: 413 GIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDY-------KEVLELFKYMRA 464
++ R G+ E + + P I + +++AC +G+ K++LEL+ Y A
Sbjct: 518 DLFGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLELYPYDPA 577
Query: 465 ARIYPDN 471
I N
Sbjct: 578 TYIMLSN 584
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 132/256 (51%), Gaps = 4/256 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
M ++NV ++ S+IS Y+R +A+ + M++ EP T+ LLS S + +
Sbjct: 230 MLNKNVFTWTSMISGYARNQLPHEAMXLMREMLHLNLEPNGMTYNSLLSSFSCPRHFDKC 289
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRH-GCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ ++ G + ++ ++ L+ Y G L++ V ++ ++WN++++ F
Sbjct: 290 KQIHCRIITEG-YESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFT 348
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G E+ + F ++ R + + +F + + LE G+QIHGLV K G+ L
Sbjct: 349 NLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLS 408
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N LV+MY + I ++ +F + D++SWN+++ A +A++L+ +M
Sbjct: 409 VQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTC 468
Query: 238 VFPNQTTFVYVINSCA 253
+ P+ T+F+ V+ +C+
Sbjct: 469 IKPDNTSFLAVLTACS 484
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 167/593 (28%), Positives = 281/593 (47%), Gaps = 46/593 (7%)
Query: 73 ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL 132
A F+ LL Y R G + ++MPR++ V++N ++ + + G +
Sbjct: 41 ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
R+ V + S+ + S L G +H L I +G + V+NSLV+MY +C +
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
A ++F E RD VSWN+++ + + + ++ M + N VI C
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220
Query: 253 AGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+G + + +++H VIK L+ DVF+ SA++D YAK L A F + N+V
Sbjct: 221 SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVM 280
Query: 311 WNALILGY-------ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQL---LQ 359
+N +I G+ + + ++ L E+ G +P EFTFS VLR+ +LA L Q
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+H +I+ ++ +++ +L+ Y SG + D
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGF-------------------------- 374
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+ + DIV+W +++ C N +++ L LF A + PD +T S+++
Sbjct: 375 ------RCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMN 428
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
AC+ L G + K+ T + N + MY + G + ++ + F EM +V+
Sbjct: 429 ACASLAVARAGEQIQCFATKSGF-DRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVV 487
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W+A+IS +G A+ AL F EM P+ + + VLTAC HGGLV EG+ +E M
Sbjct: 488 SWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETM 547
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ YG+ P + H CVVDLL R G L +AE I+ F + +IWR+ L C+
Sbjct: 548 TKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCR 600
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 147/563 (26%), Positives = 258/563 (45%), Gaps = 49/563 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
MP RN VSFN +I AYSR G +L G + +F++ L +C + G
Sbjct: 69 MPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAG 128
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A + +GL + FV +L+ +Y + G + E VF+ + V+WNS+VS + +
Sbjct: 129 RAVHALAILDGL-SSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVR 187
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD--LEFGEQIHGLVIKNGFDYEL 176
G E+ + +F + R + L + VI S D ++ E +HG VIK G D ++
Sbjct: 188 AGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDV 247
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN-FGK-----ALELY 230
+ +++++MY + + A +F+ V+ +VV +NT+I +E GK AL LY
Sbjct: 248 FLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLY 307
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
+ + P + TF V+ +C GK IH +VIK + D F+GSAL+D Y
Sbjct: 308 SEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNS 367
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL 349
+E CF +IV+W A++ G ++ L E L G +P+ FT S V+
Sbjct: 368 GCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVM 427
Query: 350 RSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+ + + Q+ C + G++ +
Sbjct: 428 NACASLAVARAGEQIQCFATKSGFDRF--------------------------------T 455
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
V N +Y R+G + + ++E D+VSW+ VI+ A +G ++ L F M A
Sbjct: 456 VMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDA 515
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
++ P+ TF+ +L+ACS + G + + K +S C ++D+ G+ G +
Sbjct: 516 KVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLAD 575
Query: 526 SVK-IFNEMTDRNVITWTALISA 547
+ I N + + + W +L+++
Sbjct: 576 AEAFISNSIFHADPVIWRSLLAS 598
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 164/598 (27%), Positives = 290/598 (48%), Gaps = 59/598 (9%)
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+S + + +G L+ +YGR+ V+W S+++ ++G
Sbjct: 74 SSSSPDAQLAGNTVLGNHLITMYGRNP-----------------VSWASVIAAHVQNGRA 116
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
D + LF ++RS A + + + + D+ G Q+H +K+ +L+V N+L
Sbjct: 117 GDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNAL 176
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF-PN 241
V MY + + +F+ ++ +D++SW +II A+ +AL+++ M V+ PN
Sbjct: 177 VTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPN 236
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ F +C + + G+ IH IK L+ D++VG +L D YA+C NL+ A + F
Sbjct: 237 EFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFY 296
Query: 302 EISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL-----RSSLAF 355
I ++VSWN+++ Y+ + ++ L E+ G RP+ T +L R +L
Sbjct: 297 RIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYH 356
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L +H ++++G + V SL++ YA+ +S A+
Sbjct: 357 GRL-IHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAM---------------------- 393
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ +++ D+V+WN ++ ACA + +EVL+LF + + D +
Sbjct: 394 ----------DVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLN 443
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-T 534
++LSA ++L + +H K ++ D + N LID Y KCGS+ ++++F M
Sbjct: 444 NVLSASAELGYFEMVKQVHAYAFKAGLVD-DRMLSNTLIDTYAKCGSLDDAMRLFEIMGN 502
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+R+V +W++LI G+A+ A + F M LG +P+ V I VLTAC G V EG
Sbjct: 503 NRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCY 562
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ M YG+ P +H C+VDLL R G L EA I MPF P+ ++W+T L +
Sbjct: 563 YYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASK 620
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 159/572 (27%), Positives = 277/572 (48%), Gaps = 46/572 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPV-EG 58
M RN VS+ S+I+A+ + G DAL +F M+ G QF G + +C L V G
Sbjct: 95 MYGRNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTG 154
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A LK+ +D V AL+ +Y ++G +D+ +FE + K L++W SI++ F +
Sbjct: 155 RQVHAHALKSER-GSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQ 213
Query: 119 HGFVEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
GF + + +F E+ V E F E+GEQIHGL IK D +L
Sbjct: 214 QGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLY 273
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V SL +MY +C + SA F +E D+VSWN+I+ A + +AL L+ M
Sbjct: 274 VGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSG 333
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P+ T ++ +C G G+ IH+ ++K L+ DV V ++L+ YA+C +L A
Sbjct: 334 LRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAM 393
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP--NEFTFSHVLRSSLA- 354
F EI ++++V+WN+++ A + P + L LL P + + ++VL +S
Sbjct: 394 DVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKS-EPSLDRISLNNVLSASAEL 452
Query: 355 --FQLL-QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
F+++ Q+H + G + + +L+ +YAK G + DA+ + R
Sbjct: 453 GYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNR-------- 504
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
D+ SW+ +I A G KE +LF MR+ I P++
Sbjct: 505 -----------------------DVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNH 541
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+ +L+ACS++ + G + +++ I C+ ++D+ + G + + +
Sbjct: 542 VTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFID 601
Query: 532 EMT-DRNVITWTALISALGLNG---FAQRALE 559
+M + ++I W L++A ++ +RA E
Sbjct: 602 QMPFEPDIIMWKTLLAASKMHNDMEMGKRAAE 633
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 149/523 (28%), Positives = 262/523 (50%), Gaps = 44/523 (8%)
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
++S + +I +++ L+ QIH ++ G + + L++ I A ++F
Sbjct: 20 SDSFYASLIDSATHKAQLK---QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76
Query: 200 KDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
D+ + WN II + + +F AL +Y M + V P+ TF +++ +C+GL +
Sbjct: 77 DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS--EISNKNIVSWNALILG 317
+G+ +HA+V + + DVFV + L+ YAKC L A F + + IVSW A++
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 318 YASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENY 372
YA P ++ + + ++ +P+ VL + Q L+ +H +++MG E
Sbjct: 197 YAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
+L SL T YAK G ++ A L +++
Sbjct: 257 PDLLISLNTMYAKCGQVATAKI--------------------------------LFDKMK 284
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
P+++ WN +I+ A NG +E +++F M + PD + S +SAC+++ +L S
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
++ + +++ D F+ + LIDM+ KCGS+ + +F+ DR+V+ W+A+I GL+G
Sbjct: 345 MYEYVGRSDY-RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY 612
A+ A+ +R ME G P+ V + +L AC H G+VREG F M + + P+ HY
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMA-DHKINPQQQHY 462
Query: 613 HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
CV+DLL R GHL +A ++I MP P +W L C++ R
Sbjct: 463 ACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 505
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 190/350 (54%), Gaps = 6/350 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P + +N+II YSR + +DAL M+ M P FTF LL +C L+ ++ G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE--DMPRKSLVTWNSIVSIF 116
+ A V + G F AD FV L+ LY + L +VFE +P +++V+W +IVS +
Sbjct: 139 RFVHAQVFRLG-FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAY 197
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G + + +F + + +V + V V++ + QDL+ G IH V+K G + E
Sbjct: 198 AQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP 257
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ SL MY +C + +A+ +F ++ +++ WN +I A++ +A++++ M
Sbjct: 258 DLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK 317
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+ + I++CA + + +S++ V ++ DVF+ SAL+D +AKC ++EGA
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 297 HLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTF 345
L F ++++V W+A+I+GY + +I L + + G PN+ TF
Sbjct: 378 RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTF 427
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/497 (24%), Positives = 235/497 (47%), Gaps = 44/497 (8%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ A +L GL + F+ T L+ G + VF+D+PR + WN+I+ + ++
Sbjct: 39 QIHARLLVLGLQFS-GFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+D + ++ + + V+ +F ++ S L+ G +H V + GFD ++ V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEI--RDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
N L+ +Y +C + SA +F+ + + R +VSW I+ A A++ +ALE++ M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ V V+N+ LQ+ G+SIHA V+K LE + + +L YAKC + A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF- 355
+ F ++ + N++ WNA+I GYA + +I + E++ RP+ + + + +
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 356 ---QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
Q ++ + R Y + ++ +L+ +AK G + A
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL------------------ 379
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+++RT L+R D+V W+ +I +G +E + L++ M ++P++
Sbjct: 380 -VFDRT------------LDR-DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEI-ISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+ LL AC+ + G L+ +I + C +ID+ G+ G + + ++
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYAC--VIDLLGRAGHLDQAYEVIK 483
Query: 532 EM-TDRNVITWTALISA 547
M V W AL+SA
Sbjct: 484 CMPVQPGVTVWGALLSA 500
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 128/254 (50%), Gaps = 3/254 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
+P+R +VS+ +I+SAY++ G +AL +F +M +P +L+ + + +G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ ASV+K GL + +L +Y + G + +F+ M +L+ WN+++S + K
Sbjct: 242 RSIHASVVKMGLEIEPDLL-ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G+ + + +F E++ +V S I + LE ++ V ++ + ++ +
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+++L++M+ +C + A +F RDVV W+ +I +A+ LY M V
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420
Query: 239 FPNQTTFVYVINSC 252
PN TF+ ++ +C
Sbjct: 421 HPNDVTFLGLLMAC 434
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 174/582 (29%), Positives = 285/582 (48%), Gaps = 43/582 (7%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED---CMFLFCELV 133
+ L+ LY G + F+ + + + WN ++S +G+ G+ + C LF ++
Sbjct: 88 ISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLF--ML 145
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
S + +F V+ N D G +IH L +K GF +++ VA SL+++Y + +
Sbjct: 146 SSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVV 202
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
+A +F ++ RD+ SWN +I +S N +AL L S + + T V ++++C
Sbjct: 203 NARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTL----SDGLRAMDSVTVVSLLSACT 258
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+ G +IH+ IK+ LE ++FV + L+D YA+ +L+ F + ++++SWN+
Sbjct: 259 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNS 318
Query: 314 LILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY 372
+I Y P LL + ++L +P+ T SLA L QL
Sbjct: 319 IIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLI-----SLASILSQL------------ 361
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
G + + G F+ + I AVV +Y + G + + + L
Sbjct: 362 ----GEIRACRSVQGFTLRKGWFLEDITIGNAVVV------MYAKLGLVDSARAVFNWLP 411
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMR--AARIYPDNYTFVSLLSACSKLCNLALG 490
D++SWN +I+ A NG E +E++ M I + T+VS+L ACS+ L G
Sbjct: 412 NKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQG 471
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
LHG + K + D FV L DMYGKCG + ++ +F ++ N + W LI+ G
Sbjct: 472 MKLHGRLLKNGLYL-DVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGF 530
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
+G ++A+ F+EM G KPD + + +L+AC H GLV EG FE M YG+ P +
Sbjct: 531 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLK 590
Query: 611 HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
HY C+VDL R G L+ A I +MP P+A IW L C+
Sbjct: 591 HYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACR 632
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 154/590 (26%), Positives = 281/590 (47%), Gaps = 52/590 (8%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMF-LYMINRGFEPTQFTFGGLLSCDSLNPVEGAQL 61
+R+V ++N +IS Y R GY + +R F L+M++ G +P TF +L N +G ++
Sbjct: 114 NRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKA-CRNVTDGNKI 172
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
LK G F D +V +L+ LY R+G + +F++MP + + +WN+++S + + G
Sbjct: 173 HCLALKFG-FMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGN 231
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ + L L A+ + V ++ + D G IH IK+G + EL V+N
Sbjct: 232 AKEALTLSDGL----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK 287
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+++Y + + +K+F + +RD++SWN+II A +E +A+ L+ M + + P+
Sbjct: 288 LIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPD 347
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNA--LECDVFVGSALVDFYAKCDNLEGAHLC 299
T + + + + L +S+ ++ LE D+ +G+A+V YAK ++ A
Sbjct: 348 CLTLISLASILSQLGEIRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKLGLVDSARAV 406
Query: 300 FSEISNKNIVSWNALILGYASK---SSPTSIFLLIELLQLGYRPNEFTFSHVL----RSS 352
F+ + NK+++SWN +I GYA S ++ ++E N+ T+ VL ++
Sbjct: 407 FNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAG 466
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
Q ++LH +++ G +V SL Y K G + DAL+
Sbjct: 467 ALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALS------------------ 508
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
L Q+ R + V WN +IA +G ++ + LFK M + PD+
Sbjct: 509 --------------LFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHI 554
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TFV+LLSACS + G +++ I+ ++D+YG+ G + ++
Sbjct: 555 TFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKS 614
Query: 533 MT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
M + W AL+SA ++G L K +P+ V +L+
Sbjct: 615 MPLQPDASIWGALLSACRVHGNVD--LGKIASEHLFEVEPEHVGYHVLLS 662
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 226/498 (45%), Gaps = 43/498 (8%)
Query: 156 DLEFGEQIHG-LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+L+ + +H LV+ N + ++ LVN+Y + A F + RDV +WN +I
Sbjct: 66 NLQSAKCLHARLVVSNAIQ-NVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMI 124
Query: 215 GALAESENFGKALELY-LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
+ + + + L M + P+ TF V+ +C +N G IH +K
Sbjct: 125 SGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKAC---RNVTDGNKIHCLALKFGF 181
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL 333
DV+V ++L+ Y + + A + F E+ +++ SWNA+I GY
Sbjct: 182 MWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYC-------------- 227
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDA 392
Q G T S LR+ + ++ L G ++ G + SY+ K GL S+
Sbjct: 228 -QSGNAKEALTLSDGLRAMDSVTVVSLLSACTEAG----DFNRGVTIHSYSIKHGLESEL 282
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+N + +Y G + K+ ++ D++SWN +I A N
Sbjct: 283 FV-------------SNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQP 329
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
+ LF+ MR +RI PD T +SL S S+L + S+ G + D + N
Sbjct: 330 LRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNA 389
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG--FK 570
++ MY K G + S+ +FN + +++VI+W +IS NGFA A+E + ME G
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEIS 449
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
++ ++VL AC G +R+GM+L R+ ++ G+ ++ + D+ + G L +A
Sbjct: 450 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVGTSLADMYGKCGRLDDALS 508
Query: 631 IITTMPFPPNALIWRTFL 648
+ +P N++ W T +
Sbjct: 509 LFYQIP-RVNSVPWNTLI 525
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 213/463 (46%), Gaps = 49/463 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQ-FTFGGLLSC--DSLNPVE 57
MP R++ S+N++IS Y + G ++AL ++ G T LLS ++ +
Sbjct: 211 MPTRDMGSWNAMISGYCQSGNAKEAL-----TLSDGLRAMDSVTVVSLLSACTEAGDFNR 265
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + + +K+GL ++ FV L+ LY G L + VF+ M + L++WNSI+ +
Sbjct: 266 GVTIHSYSIKHGLE-SELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYE 324
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYEL 176
+ + LF E+ S + + + + LS ++ + G ++ G F ++
Sbjct: 325 LNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDI 384
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ N++V MY + + SA +F + +DV+SWNTII A++ +A+E+Y M +
Sbjct: 385 TIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEE 444
Query: 237 --IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ NQ T+V V+ +C+ G +H +++KN L DVFVG++L D Y KC L+
Sbjct: 445 GGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLD 504
Query: 295 GAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F +I N V WN LI + ++ L E+L G +P+ TF
Sbjct: 505 DALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV------- 557
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----N 409
+L+++ + SGL+ + + + P+
Sbjct: 558 ------------------------TLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYG 593
Query: 410 IIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
+ +Y R GQ + + + +PD W +++AC +G+
Sbjct: 594 CMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGN 636
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 168/581 (28%), Positives = 279/581 (48%), Gaps = 40/581 (6%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
+G ALL ++ R G L E VF M + L +WN +V + K G+ ++ + L+ ++
Sbjct: 131 LGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVG 190
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
+ +F V+ DL G ++H VI+ GF+ ++ V N+L+ MY +C I+SA
Sbjct: 191 IRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSAR 250
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
+F + RD +SWN +I E++ + L L+ M V P+ T VI++C L
Sbjct: 251 LVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALG 310
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ LG+ +H VIK +V V ++L+ ++ + A + FS++ K++VSW A+I
Sbjct: 311 DERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMIS 370
Query: 317 GYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYEN 371
GY P +++ G P+E T + VL + LL LH R G +
Sbjct: 371 GYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTS 430
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
Y V SL+ Y+K I AL ++ ++
Sbjct: 431 YVIVANSLIDMYSKCRCIDKAL--------------------------------EVFHRI 458
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
+++SW +I N E L F+ M + + P++ T VS+LSAC+++ L+ G
Sbjct: 459 PNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGK 517
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H +T + D F+ N L+DMY +CG + + FN +++V +W L++
Sbjct: 518 EIHAHALRTG-LGFDGFLPNALLDMYVRCGRMEPAWNQFNS-CEKDVASWNILLTGYAQQ 575
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G A+E F +M PD + ++L AC G+V +G+E FE M + + P + H
Sbjct: 576 GKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKH 635
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y VVDLL R G L++A + I MP P+ IW L C+
Sbjct: 636 YASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACR 676
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 156/559 (27%), Positives = 268/559 (47%), Gaps = 51/559 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSL-NPVEG 58
M +R++ S+N ++ Y++ GY ++AL ++ M+ G P +TF +L +C L + G
Sbjct: 155 MAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARG 214
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ V++ G F +D V AL+ +Y + G + VF+ MPR+ ++WN+++S
Sbjct: 215 REVHLHVIRYG-FESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMIS---- 269
Query: 119 HGFVED--CM------FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
G+ E+ C+ F+ E +T +S + L +E+ G ++HG VIK
Sbjct: 270 -GYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDER---LGREVHGYVIKT 325
Query: 171 GFDYELLVANSLVNMYFQCAGIWS-AEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
GF E+ V NSL+ M+ G W AE +F +E +D+VSW +I ++ KA+E
Sbjct: 326 GFVAEVSVNNSLIQMH-SSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVET 384
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
Y M + V P++ T V+++CAGL G +H + L V V ++L+D Y+K
Sbjct: 385 YTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSK 444
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL 349
C ++ A F I NKN++SW ++ILG + + L +PN T VL
Sbjct: 445 CRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVL 504
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
S ++ L C G E + + L ++GL D +P A++
Sbjct: 505 --SACARIGALSC-----GKEIHAHAL--------RTGLGFDGF-------LPNALL--- 539
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+Y R G+ + E+ D+ SWNI++ A G +ELF M + + P
Sbjct: 540 ---DMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNP 595
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D TF SLL ACS+ + G ++ I+ + ++D+ G+ G + + +
Sbjct: 596 DEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEF 655
Query: 530 FNEMT-DRNVITWTALISA 547
+M D + W AL++A
Sbjct: 656 IKKMPIDPDPAIWGALLNA 674
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/520 (27%), Positives = 260/520 (50%), Gaps = 32/520 (6%)
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
NS++ G +E + + +V++ E +++ ++ ++ G ++H V K
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
+ + N+L++M+ + + A +F + RD+ SWN ++G A++ F +AL L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
Y RM + P+ TF V+ +C GL + G+ +H VI+ E DV V +AL+ Y K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
C ++ A L F + ++ +SWNA+I GY + + L + + P+ T + V
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ + A R+G E + YV+ K+G +++ V
Sbjct: 303 ISACEALG-------DERLGREVHGYVI--------KTGFVAE-------------VSVN 334
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N + +++ G ++E + S++E D+VSW +I+ NG ++ +E + M +
Sbjct: 335 NSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVV 394
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD T S+LSAC+ L L G LH +T ++S V N LIDMY KC I +++
Sbjct: 395 PDEITIASVLSACAGLGLLDKGIMLHEFADRTG-LTSYVIVANSLIDMYSKCRCIDKALE 453
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F+ + ++NVI+WT++I L LN + AL F++M L KP+ V L++VL+AC G
Sbjct: 454 VFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGA 512
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
+ G E+ R+ G+ + + ++D+ VR G ++ A
Sbjct: 513 LSCGKEIHAHALRT-GLGFDGFLPNALLDMYVRCGRMEPA 551
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 135/537 (25%), Positives = 242/537 (45%), Gaps = 70/537 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+ +S+N++IS Y + LR+F M +P T ++S C++L G
Sbjct: 256 MPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLG 315
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ V+K G F A+ V +L+ ++ GC DE VF M K LV+W +++S + K
Sbjct: 316 REVHGYVIKTG-FVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK 374
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G E + + + V E + V+ + L+ G +H + G ++V
Sbjct: 375 NGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIV 434
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
ANSL++MY +C I A ++F + ++V+SW +II L + +AL + +M + +
Sbjct: 435 ANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLK 494
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T V V+++CA + GK IHA ++ L D F+ +AL+D Y +C +E A
Sbjct: 495 -PNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWN 553
Query: 299 CFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+ K++ SWN L+ GYA + ++ L ++++ P+E TF+
Sbjct: 554 QFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFT----------- 601
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
SL+ + ++SG+++D L + ++ + P
Sbjct: 602 --------------------SLLCACSRSGMVTDGLEYFESMEHKFHIAP---------N 632
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
Y V LL + R + + +++++ I PD + +L
Sbjct: 633 LKHYASVVDLLGRAGRLE---------------------DAYEFIKKMPIDPDPAIWGAL 671
Query: 478 LSACSKLCNLALG--SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
L+AC N+ LG ++ H T+ + +CN+ D GK + KI E
Sbjct: 672 LNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADS-GKWDEVARVRKIMRE 727
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 7/204 (3%)
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
GD ++ L M+ ++ + T+++LL C + GS +H + KT +
Sbjct: 72 KGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKT-VTRLGVR 130
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+ N L+ M+ + G + + +F +M +R++ +W L+ G+ AL + M ++G
Sbjct: 131 LGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVG 190
Query: 569 FKPDRVALIAVLTACRHGGL--VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
+PD VL C GGL + G E+ + R YG E ++D + ++ + V+ G +
Sbjct: 191 IRPDVYTFPCVLRTC--GGLPDLARGREVHLHVIR-YGFESDVDVVNALITMYVKCGDIF 247
Query: 627 EAEKIITTMPFPPNALIWRTFLEG 650
A + MP + + W + G
Sbjct: 248 SARLVFDRMP-RRDRISWNAMISG 270
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 164/579 (28%), Positives = 285/579 (49%), Gaps = 47/579 (8%)
Query: 81 LLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALT 140
+L Y G L +F P ++ TW ++ G D + LF ++ E +
Sbjct: 80 ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML-GEGVIP 138
Query: 141 ESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
+ V + L +H IK G D + V N+L++ Y + + +A ++F
Sbjct: 139 DRVTVTTVLNLPGCT----VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFL 194
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
++ +D V++N ++ ++ +AL+L+ M + TF ++ AG+ + +L
Sbjct: 195 EMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLL 254
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA- 319
G +HA V+++ +VFV ++L+DFY+KCD L+ F E+ ++ VS+N +I YA
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAW 314
Query: 320 SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL------LQLHCLIIRMGYENYE 373
++ + T + L E+ +LG+ ++ +L S+A L Q+H ++ +G + +
Sbjct: 315 NQCAATVLRLFREMQKLGFDRQVLPYATML--SVAGSLPDVHIGKQIHAQLVLLGLASED 372
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
+ +L+ Y+K G++ A + NR+ +
Sbjct: 373 LLGNALIDMYSKCGMLDAAKS------------------NFSNRSEK------------- 401
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
+SW +I NG ++E L+LF MR A + PD TF S++ A S L + LG L
Sbjct: 402 -SAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQL 460
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H + ++ SS F ++L+DMY KCG + +++ F+EM +RN I+W A+ISA G
Sbjct: 461 HSYLIRSGYKSS-VFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGE 519
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
A+ A++ F M GF PD V ++VL AC H GL E M+ F M Y + P +HY
Sbjct: 520 AKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYA 579
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
CV+D L R G + +K++ MPF + +IW + L C+
Sbjct: 580 CVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCR 618
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 163/616 (26%), Positives = 283/616 (45%), Gaps = 50/616 (8%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQL 61
P RN ++ ++ A++ G DAL +F M+ G P + T +L+ L L
Sbjct: 101 PHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLN---LPGCTVPSL 157
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+K GL FV LL Y +HG L VF +M K VT+N+++ K G
Sbjct: 158 HPFAIKFGLD-THVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 216
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ LF + R+ + T +F ++ + L G Q+H LV+++ + V NS
Sbjct: 217 HTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNS 276
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L++ Y +C + ++F ++ RD VS+N II A A ++ L L+ M + F
Sbjct: 277 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQ-KLGFDR 335
Query: 242 QTTFVYVINSCAG-LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
Q + S AG L + +GK IHA+++ L + +G+AL+D Y+KC L+ A F
Sbjct: 336 QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNF 395
Query: 301 SEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL- 358
S S K+ +SW ALI GY ++ L ++ + G RP+ TFS ++++S + ++
Sbjct: 396 SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG 455
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
QLH +IR GY++ +V +++ +Y
Sbjct: 456 LGRQLHSYLIRSGYKS--------------------------------SVFSGSVLVDMY 483
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G +E ++ ++ + +SWN VI+A AH G+ K +++F+ M PD+ TF+
Sbjct: 484 AKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFL 543
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIIS--SDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
S+L+ACS L+K IS + + C +ID G+ G K+ EM
Sbjct: 544 SVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYAC--VIDTLGRVGCFSQVQKMLVEM 601
Query: 534 TDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ + I WT+++ + ++G + L + + G +P +L+ E
Sbjct: 602 PFKADPIIWTSILHSCRIHG--NQELARVAADKLFGMEPTDATPYVILSNIYARAGQWED 659
Query: 593 MELFERMNRSYGVEPE 608
+++ R GV E
Sbjct: 660 AACVKKIMRDRGVRKE 675
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 224/472 (47%), Gaps = 53/472 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEG 58
M D++ V++N+++ S+ G AL++F M G T FTF +L+ + + + G
Sbjct: 196 MHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLG 255
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A VL++ + FV +LL Y + CLD++ +F++MP + V++N I++ +
Sbjct: 256 HQVHALVLRSTSVL-NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAW 314
Query: 119 HGFVEDCMFLFCELVR---SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ + LF E+ + L ++ + V L D+ G+QIH ++ G E
Sbjct: 315 NQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLP---DVHIGKQIHAQLVLLGLASE 371
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L+ N+L++MY +C + +A+ F + + +SW +I ++ +AL+L+ M
Sbjct: 372 DLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRR 431
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ P++ TF +I + + L LG+ +H+ +I++ + VF GS LVD YAKC L+
Sbjct: 432 AGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDE 491
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVL----R 350
A F E+ +N +SWNA+I YA + + E +L G+ P+ TF VL
Sbjct: 492 ALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSH 551
Query: 351 SSLA------FQLL---------------------------QLHCLIIRMGYENYEYVLG 377
+ LA F L+ Q+ +++ M ++ +
Sbjct: 552 NGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWT 611
Query: 378 SLMTSYAKSGLISDALAFVTALNI----PRAVVPANIIAGIYNRTGQYNETV 425
S++ S G + LA V A + P P I++ IY R GQ+ +
Sbjct: 612 SILHSCRIHG--NQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAA 661
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 218/476 (45%), Gaps = 45/476 (9%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N +++ Y + +A+ +F R+ +W ++ A A + AL L+ M + V
Sbjct: 78 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 137
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P++ T V+N L + S+H IK L+ VFV + L+D Y K L A
Sbjct: 138 PDRVTVTTVLN----LPGCTV-PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 192
Query: 300 FSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLR--SSLAFQ 356
F E+ +K+ V++NA+++G + + T ++ L + + G FTFS +L + +A
Sbjct: 193 FLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHL 252
Query: 357 LL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
LL Q+H L++R +V SL+ Y+K + D
Sbjct: 253 LLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDD----------------------- 289
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+L ++ D VS+N++IAA A N VL LF+ M+ +
Sbjct: 290 ---------MRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPY 340
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
++LS L ++ +G +H + + S D + N LIDMY KCG + ++ F+ +
Sbjct: 341 ATMLSVAGSLPDVHIGKQIHAQLVLLGLASED-LLGNALIDMYSKCGMLDAAKSNFSNRS 399
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+++ I+WTALI+ NG + AL+ F +M G +PDR +++ A ++ G +
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
L + RS G + + +VD+ + G L EA + MP N++ W +
Sbjct: 460 LHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 513
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 7/222 (3%)
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
L +++ G++ Y L + S SG + A A + + + N+I Y+ +G
Sbjct: 30 LDARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMP-HKNIFSLNLILSAYSSSG 88
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
L + +W I++ A A G + L LF+ M + PD T ++L+
Sbjct: 89 DLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLN 148
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
C + SLH K + + FVCN L+D Y K G + ++ ++F EM D++ +
Sbjct: 149 LPG--CTV---PSLHPFAIKFGL-DTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAV 202
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
T+ A++ G +AL+ F M G ++LT
Sbjct: 203 TYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILT 244
>gi|449447755|ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 696
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 173/625 (27%), Positives = 305/625 (48%), Gaps = 38/625 (6%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVLKNGL 70
+ ++R +++AL + Y+ +G TF L++ + + Q+ A + NGL
Sbjct: 86 VQRFARQNKLKEALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGL 145
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS---IFGKHGFVEDCMF 127
+ F+ T L+ +Y G L+E +F++ KS+ WN+++ + G+ + +
Sbjct: 146 E-NNEFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDY-RSILS 203
Query: 128 LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYF 187
+ E+ R V L SF +I + G + HGL+IKNG L+ +LV+MYF
Sbjct: 204 TYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYF 263
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVY 247
+C I A +MF ++ RDVV W +II A + +ALE RM D + PN
Sbjct: 264 KCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTT 323
Query: 248 VINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
++ + LG+ +HA VIK + +F+ SAL+D Y KC ++ F +
Sbjct: 324 ILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMER 383
Query: 307 NIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLII 365
N + W AL+ GYA ++ +I + Q G+RP+ T + +L + QL L
Sbjct: 384 NAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATIL--PVCAQLRAL----- 436
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
R G E + +YA ++ V++L + +Y++ G + T+
Sbjct: 437 RPGKE---------IHAYAMKNCFLPNVSIVSSLMV------------MYSKCGVMDYTL 475
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
KL + +E+ +++ W +I + N E +++F+ M+ ++ PD T +L CS+
Sbjct: 476 KLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQK 535
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
L +G +HG + K + FV L+ +YGKCG++ + +F + + +TWTA+I
Sbjct: 536 MLKMGKEIHGQVLKRKF-EPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAII 594
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
A G +G Q A++ F M G P+ VL+ C+ G V E + +F+ M+ Y +
Sbjct: 595 EAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKI 654
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEK 630
+P +HY V+ +L R+G L+EA +
Sbjct: 655 KPSEEHYSLVIAILTRFGRLEEARR 679
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 160/317 (50%), Gaps = 14/317 (4%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
+RN + + +++S Y+ G +E A+R ++M GF P T +L C L + G +
Sbjct: 382 ERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKE 441
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ A +KN F + + ++L+ +Y + G +D + +F M +++++ W +++ + ++
Sbjct: 442 IHAYAMKN-CFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQ 500
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + +F + S+ + +++ S ++ L+ G++IHG V+K F+ V+
Sbjct: 501 CPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSA 560
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
LV +Y +C + A+ +F+ + ++ ++W II A ES F +A++L+ RM + P
Sbjct: 561 ELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISP 620
Query: 241 NQTTFVYVINSC--AGLQNSILG----KSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
N TF V++ C AG + L S+ K IK + E V + L F LE
Sbjct: 621 NHFTFKVVLSICKEAGFVDEALRIFKLMSVRYK-IKPSEEHYSLVIAILTRF----GRLE 675
Query: 295 GAHLCFSEISNKNIVSW 311
A C ++ + V++
Sbjct: 676 EARRCKEQVETEGAVTF 692
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 156/505 (30%), Positives = 266/505 (52%), Gaps = 19/505 (3%)
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC------AGIWSAEKMFKDVEI 204
L N + ++ +QI +++ GF + +N + C + AE++F ++I
Sbjct: 39 LKNCKSMQHLKQIQTQILRTGFHQ----SGDTLNKFMVCCTDPSIGNLHYAERIFNYIDI 94
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+ +N +I A ++ +F KA+ L+ ++ + + P+ T+ +V + L G+ +
Sbjct: 95 PGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKV 154
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS---K 321
+ V+K+ LE D +V ++L+D YA+ ++ F E+ +++VSWN LI GY
Sbjct: 155 YGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRY 214
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL---GS 378
+F ++ Q RPNE T L + +A ++L+L I R E + + +
Sbjct: 215 EDAVDVFRRMQQ-QSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLGFTIKIGNA 273
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
L+ Y K G +S A + I + ++++G N GQ +E +L + D+V
Sbjct: 274 LVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVN-CGQLDEARELFERSPVRDVVL 332
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
W +I + + + LF+ M+ R+ PD +T V+LL+ C++L L G +HG I
Sbjct: 333 WTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYID 392
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
+ +I+ D V LI+MY KCG I S++IFN + +++ +WT++I L +NG +AL
Sbjct: 393 ENKIMI-DAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKAL 451
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDL 618
E F EM G KPD + I VL+AC HGGLV EG + F M Y +EP+++HY C++DL
Sbjct: 452 ELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDL 511
Query: 619 LVRYGHLKEAEKIITTMPFPPNALI 643
L R G L EAE++I P N +I
Sbjct: 512 LGRAGQLDEAEELIEKSPNVNNEVI 536
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 128/537 (23%), Positives = 243/537 (45%), Gaps = 55/537 (10%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLF------------CADAFVGTALLGLYGRHGCLDEV 94
L +C S+ ++ Q+Q +L+ G C D +G E
Sbjct: 39 LKNCKSMQHLK--QIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYA---------ER 87
Query: 95 VSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE 154
+ + D+P L +N ++ F K+G + LF +L ++ ++ V +
Sbjct: 88 IFNYIDIP--GLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCL 145
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
++ GE+++G V+K+G +++ V NSL++MY + + + ++F+++ RDVVSWN +I
Sbjct: 146 GEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLI 205
Query: 215 GALAESENFGKALELYLRMSVDIVF-PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
+ + A++++ RM PN+ T V +++C L+ LGK IH + ++ L
Sbjct: 206 SGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIH-RYVREQL 264
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-----------KS 322
+ +G+ALVD Y KC +L A F+++ K ++ W +++ GY + +
Sbjct: 265 GFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFER 324
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTS 382
SP +L + GY F+ + F+ +Q I R+ + + V +L+T
Sbjct: 325 SPVRDVVLWTAMINGY----VQFNRFDDAVALFREMQ----IKRVSPDRFTLV--ALLTG 374
Query: 383 YAKSGLISDAL---AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
A+ G + ++ I V + +Y + G +++++ + L+ D SW
Sbjct: 375 CAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASW 434
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+I A NG + LELF M + PD+ TF+ +LSACS + G +
Sbjct: 435 TSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTA 494
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN----VITWTALISALGLNG 552
I LID+ G+ G + + ++ + + N V + AL+SA +G
Sbjct: 495 VYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHG 551
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 141/287 (49%), Gaps = 36/287 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLLS-CDSLNPVE- 57
MP R+VVS+N +IS Y +C EDA+ +F M + P + T LS C +L +E
Sbjct: 193 MPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLEL 252
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS--- 114
G ++ V + F +G AL+ +Y + G L +F DMP K+++ W S+VS
Sbjct: 253 GKEIHRYVREQLGFTIK--IGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYV 310
Query: 115 ----------IFGK-------------HGFVE-----DCMFLFCELVRSEVALTESSFVG 146
+F + +G+V+ D + LF E+ V+ + V
Sbjct: 311 NCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVA 370
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
++ G + LE G+ IHG + +N + +V +L+ MY +C I + ++F ++ +D
Sbjct: 371 LLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKD 430
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
SW +II LA + KALEL+ M V P+ TF+ V+++C+
Sbjct: 431 TASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACS 477
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQ 60
P R+VV + ++I+ Y + +DA+ +F M + P +FT LL+ C L +E +
Sbjct: 326 PVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGK 385
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ DA VGTAL+ +Y + G +++ + +F + K +W SI+ +G
Sbjct: 386 WIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNG 445
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ 162
+ LF E+V++ V + +F+GV+ S+ +E G +
Sbjct: 446 KTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRK 487
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 14/133 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+ +++ S+ SII + G AL +F M+ G +P TF G+LS C VE
Sbjct: 426 LKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEG 485
Query: 60 QLQASVLKNGLFCADAFVG--TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+ + ++ + + L+ L GR G LDE + E P V IV ++G
Sbjct: 486 RKHFRSM-TAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPN---VNNEVIVPLYG 541
Query: 118 -------KHGFVE 123
HG VE
Sbjct: 542 ALLSACRTHGNVE 554
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 164/579 (28%), Positives = 285/579 (49%), Gaps = 47/579 (8%)
Query: 81 LLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALT 140
+L Y G L +F P ++ TW ++ G D + LF ++ E +
Sbjct: 80 ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML-GEGVIP 138
Query: 141 ESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
+ V + L +H IK G D + V N+L++ Y + + +A ++F
Sbjct: 139 DRVTVTTVLNLPGCT----VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFL 194
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
++ +D V++N ++ ++ +AL+L+ M + TF ++ AG+ + +L
Sbjct: 195 EMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLL 254
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA- 319
G +HA V+++ +VFV ++L+DFY+KCD L+ F E+ ++ VS+N +I YA
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAW 314
Query: 320 SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL------LQLHCLIIRMGYENYE 373
++ + T + L E+ +LG+ ++ +L S+A L Q+H ++ +G + +
Sbjct: 315 NQCAATVLRLFREMQKLGFDRQVLPYATML--SVAGSLPDVHIGKQIHAQLVLLGLASED 372
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
+ +L+ Y+K G++ A + NR+ +
Sbjct: 373 LLGNALIDMYSKCGMLDAAKS------------------NFSNRSEK------------- 401
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
+SW +I NG ++E L+LF MR A + PD TF S++ A S L + LG L
Sbjct: 402 -SAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQL 460
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H + ++ SS F ++L+DMY KCG + +++ F+EM +RN I+W A+ISA G
Sbjct: 461 HSYLIRSGYKSS-VFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGE 519
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
A+ A++ F M GF PD V ++VL AC H GL E M+ F M Y + P +HY
Sbjct: 520 AKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYA 579
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
CV+D L R G + +K++ MPF + +IW + L C+
Sbjct: 580 CVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCR 618
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 163/616 (26%), Positives = 283/616 (45%), Gaps = 50/616 (8%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQL 61
P RN ++ ++ A++ G DAL +F M+ G P + T +L+ L L
Sbjct: 101 PHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLN---LPGCTVPSL 157
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+K GL FV LL Y +HG L VF +M K VT+N+++ K G
Sbjct: 158 HPFAIKFGLD-THVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 216
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ LF + R+ + T +F ++ + L G Q+H LV+++ + V NS
Sbjct: 217 HTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNS 276
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L++ Y +C + ++F ++ RD VS+N II A A ++ L L+ M + F
Sbjct: 277 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQ-KLGFDR 335
Query: 242 QTTFVYVINSCAG-LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
Q + S AG L + +GK IHA+++ L + +G+AL+D Y+KC L+ A F
Sbjct: 336 QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNF 395
Query: 301 SEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL- 358
S S K+ +SW ALI GY ++ L ++ + G RP+ TFS ++++S + ++
Sbjct: 396 SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG 455
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
QLH +IR GY++ +V +++ +Y
Sbjct: 456 LGRQLHSYLIRSGYKS--------------------------------SVFSGSVLVDMY 483
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G +E ++ ++ + +SWN VI+A AH G+ K +++F+ M PD+ TF+
Sbjct: 484 AKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFL 543
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIIS--SDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
S+L+ACS L+K IS + + C +ID G+ G K+ EM
Sbjct: 544 SVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYAC--VIDTLGRVGCFSQVQKMLVEM 601
Query: 534 TDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ + I WT+++ + ++G + L + + G +P +L+ E
Sbjct: 602 PFKADPIIWTSILHSCRIHG--NQELARVAADKLFGMEPTDATPYVILSNIYARAGQWED 659
Query: 593 MELFERMNRSYGVEPE 608
+++ R GV E
Sbjct: 660 AACVKKIMRDRGVRKE 675
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 224/472 (47%), Gaps = 53/472 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEG 58
M D++ V++N+++ S+ G AL++F M G T FTF +L+ + + + G
Sbjct: 196 MHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLG 255
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A VL++ + FV +LL Y + CLD++ +F++MP + V++N I++ +
Sbjct: 256 HQVHALVLRSTSVL-NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAW 314
Query: 119 HGFVEDCMFLFCELVR---SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ + LF E+ + L ++ + V L D+ G+QIH ++ G E
Sbjct: 315 NQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLP---DVHIGKQIHAQLVLLGLASE 371
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L+ N+L++MY +C + +A+ F + + +SW +I ++ +AL+L+ M
Sbjct: 372 DLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRR 431
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ P++ TF +I + + L LG+ +H+ +I++ + VF GS LVD YAKC L+
Sbjct: 432 AGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDE 491
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVL----R 350
A F E+ +N +SWNA+I YA + + E +L G+ P+ TF VL
Sbjct: 492 ALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSH 551
Query: 351 SSLA------FQLL---------------------------QLHCLIIRMGYENYEYVLG 377
+ LA F L+ Q+ +++ M ++ +
Sbjct: 552 NGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWT 611
Query: 378 SLMTSYAKSGLISDALAFVTALNI----PRAVVPANIIAGIYNRTGQYNETV 425
S++ S G + LA V A + P P I++ IY R GQ+ +
Sbjct: 612 SILHSCRIHG--NQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAA 661
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 218/476 (45%), Gaps = 45/476 (9%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N +++ Y + +A+ +F R+ +W ++ A A + AL L+ M + V
Sbjct: 78 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 137
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P++ T V+N L + S+H IK L+ VFV + L+D Y K L A
Sbjct: 138 PDRVTVTTVLN----LPGCTV-PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 192
Query: 300 FSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLR--SSLAFQ 356
F E+ +K+ V++NA+++G + + T ++ L + + G FTFS +L + +A
Sbjct: 193 FLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHL 252
Query: 357 LL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
LL Q+H L++R +V SL+ Y+K + D
Sbjct: 253 LLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDD----------------------- 289
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+L ++ D VS+N++IAA A N VL LF+ M+ +
Sbjct: 290 ---------MRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPY 340
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
++LS L ++ +G +H + + S D + N LIDMY KCG + ++ F+ +
Sbjct: 341 ATMLSVAGSLPDVHIGKQIHAQLVLLGLASED-LLGNALIDMYSKCGMLDAAKSNFSNRS 399
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+++ I+WTALI+ NG + AL+ F +M G +PDR +++ A ++ G +
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
L + RS G + + +VD+ + G L EA + MP N++ W +
Sbjct: 460 LHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISA 513
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 7/218 (3%)
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
+++ G++ Y L + S SG + A A + + + N+I Y+ +G
Sbjct: 34 MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMP-HKNIFSLNLILSAYSSSGDLPA 92
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
L + +W I++ A A G + L LF+ M + PD T ++L+
Sbjct: 93 AQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPG- 151
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
C + SLH K + + FVCN L+D Y K G + ++ ++F EM D++ +T+ A
Sbjct: 152 -CTVP---SLHPFAIKFGL-DTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNA 206
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
++ G +AL+ F M G ++LT
Sbjct: 207 MMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILT 244
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 182/595 (30%), Positives = 298/595 (50%), Gaps = 41/595 (6%)
Query: 49 SCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVT 108
S +S + +G L V+ GL D +V L+ LY D +VF+ + ++
Sbjct: 13 SVNSKSLKQGKVLHQKVVTLGLQ-NDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEIS 71
Query: 109 W-NSIVSIFGKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGL 166
N +++ + ++ ++ + LF +L+ +S ++ V+ + + G+ IH
Sbjct: 72 LCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTC 131
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
++K G +++V +SLV MY +C A K+F ++ +DV WNT+I +S F +A
Sbjct: 132 LVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEA 191
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
L + M P+ T I+SCA L + G+ IH +++ + D FV +ALVD
Sbjct: 192 LRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDM 251
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS-IFLLIELLQLGYRP-NEFT 344
Y KC LE A F ++ NK +V+WN++I GY K S I L + G +P
Sbjct: 252 YGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTL 311
Query: 345 FSHVLRSSLAFQLLQ---LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
S ++ S + QLL+ +H IIR + ++ SLM Y K G + A
Sbjct: 312 TSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESA--------- 362
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
ET+ L + + VSWN++I+ G + L LF
Sbjct: 363 ---------------------ETIFKL--MPKTTTVSWNVMISGYVTEGKLFDALRLFGE 399
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M + + PD TF S+L+ACS+L L G +H LI + + ++ V L+DMY KCG
Sbjct: 400 MSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERN-LGNNEVVMGALLDMYAKCG 458
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
++ + +F + +R++++WT++I+A G +G ALE F EM KPDRV +A+L+
Sbjct: 459 AVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILS 518
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
AC H GLV +G+ F +M YG+ P ++HY C++ LL R G L EA +I+ + P
Sbjct: 519 ACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNP 573
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 143/537 (26%), Positives = 254/537 (47%), Gaps = 55/537 (10%)
Query: 10 NSIISAYSRCGYVEDALRMF-LYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVL 66
N +++ Y+R ++AL +F M +P +T+ +L +C L V G + ++
Sbjct: 74 NGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLV 133
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K GL D VG++L+G+Y + + V +F++MP K + WN+++S + + G E+ +
Sbjct: 134 KEGLM-VDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEAL 192
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
F + R + I + DL+ G +IH ++ +GF + V+ +LV+MY
Sbjct: 193 RYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMY 252
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+C + A ++F+ + + VV+WN++I + ++L+ RM + V P TT
Sbjct: 253 GKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLT 312
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
+ +C+ + GK +H +I+N ++ D+F+ S+L+D Y KC +E A F +
Sbjct: 313 STLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKT 372
Query: 307 NIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLH 361
VSWN +I GY ++ ++ L E+ + P+ TF+ VL + L ++H
Sbjct: 373 TTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIH 432
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
LI+ N E V+G+L+ YAK G + +A L
Sbjct: 433 NLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLP--------------------- 471
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
ER D+VSW +I A +G E LELF M + + PD TF+++LSAC
Sbjct: 472 ----------ER-DLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSAC 520
Query: 482 SK-------LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
S L + +++G+I + E S LI + G+ G + + +I
Sbjct: 521 SHAGLVDDGLYHFNQMINVYGIIPRIEHYSC-------LITLLGRAGRLHEAYEILQ 570
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 184/353 (52%), Gaps = 2/353 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVEGA 59
MPD++V +N++IS Y + G E+ALR F M GFEP T + SC L ++
Sbjct: 167 MPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRG 226
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ L N F D+FV AL+ +YG+ G L+ + VFE MP K++V WNS+++ +G
Sbjct: 227 REIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFK 286
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G C+ LF + V T ++ + S L G+ +HG +I+N ++ +
Sbjct: 287 GDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLN 346
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+SL+++YF+C + SAE +FK + VSWN +I AL L+ MS V
Sbjct: 347 SSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVE 406
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ TF V+ +C+ L G+ IH +++ L + V AL+D YAKC +E A
Sbjct: 407 PDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGV 466
Query: 300 FSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRS 351
F + +++VSW ++I Y S ++ L E+LQ +P+ TF +L +
Sbjct: 467 FKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSA 519
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 142/259 (54%), Gaps = 5/259 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGL-LSC-DSLNPVEG 58
MP++ VV++NS+I+ Y G +++F M + G +PT T ++C S +EG
Sbjct: 268 MPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEG 327
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +++N + D F+ ++L+ LY + G ++ ++F+ MP+ + V+WN ++S +
Sbjct: 328 KFVHGYIIRNRIQ-PDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVT 386
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + D + LF E+ +S V +F V+ S LE G +IH L+++ +V
Sbjct: 387 EGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVV 446
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+L++MY +C + A +FK + RD+VSW ++I A +ALEL+ M V
Sbjct: 447 MGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNV 506
Query: 239 FPNQTTFVYVINSC--AGL 255
P++ TF+ ++++C AGL
Sbjct: 507 KPDRVTFLAILSACSHAGL 525
>gi|449482323|ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 716
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 173/625 (27%), Positives = 305/625 (48%), Gaps = 38/625 (6%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVLKNGL 70
+ ++R +++AL + Y+ +G TF L++ + + Q+ A + NGL
Sbjct: 86 VQRFARQNKLKEALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGL 145
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS---IFGKHGFVEDCMF 127
+ F+ T L+ +Y G L+E +F++ KS+ WN+++ + G+ + +
Sbjct: 146 E-NNEFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDY-RSILS 203
Query: 128 LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYF 187
+ E+ R V L SF +I + G + HGL+IKNG L+ +LV+MYF
Sbjct: 204 TYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYF 263
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVY 247
+C I A +MF ++ RDVV W +II A + +ALE RM D + PN
Sbjct: 264 KCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTT 323
Query: 248 VINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
++ + LG+ +HA VIK + +F+ SAL+D Y KC ++ F +
Sbjct: 324 ILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMER 383
Query: 307 NIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLII 365
N + W AL+ GYA ++ +I + Q G+RP+ T + +L + QL L
Sbjct: 384 NAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATIL--PVCAQLRAL----- 436
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
R G E + +YA ++ V++L + +Y++ G + T+
Sbjct: 437 RPGKE---------IHAYAMKNCFLPNVSIVSSLMV------------MYSKCGVMDYTL 475
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
KL + +E+ +++ W +I + N E +++F+ M+ ++ PD T +L CS+
Sbjct: 476 KLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQK 535
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
L +G +HG + K + FV L+ +YGKCG++ + +F + + +TWTA+I
Sbjct: 536 MLKMGKEIHGQVLKRKF-EPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAII 594
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
A G +G Q A++ F M G P+ VL+ C+ G V E + +F+ M+ Y +
Sbjct: 595 EAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKI 654
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEK 630
+P +HY V+ +L R+G L+EA +
Sbjct: 655 KPSEEHYSLVIAILTRFGRLEEARR 679
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 160/317 (50%), Gaps = 14/317 (4%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
+RN + + +++S Y+ G +E A+R ++M GF P T +L C L + G +
Sbjct: 382 ERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKE 441
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ A +KN F + + ++L+ +Y + G +D + +F M +++++ W +++ + ++
Sbjct: 442 IHAYAMKN-CFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQ 500
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + +F + S+ + +++ S ++ L+ G++IHG V+K F+ V+
Sbjct: 501 CPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSA 560
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
LV +Y +C + A+ +F+ + ++ ++W II A ES F +A++L+ RM + P
Sbjct: 561 ELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISP 620
Query: 241 NQTTFVYVINSC--AGLQNSILG----KSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
N TF V++ C AG + L S+ K IK + E V + L F LE
Sbjct: 621 NHFTFKVVLSICKEAGFVDEALRIFKLMSVRYK-IKPSEEHYSLVIAILTRF----GRLE 675
Query: 295 GAHLCFSEISNKNIVSW 311
A C ++ + V++
Sbjct: 676 EARRCKEQVETEGAVTF 692
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 155/453 (34%), Positives = 239/453 (52%), Gaps = 8/453 (1%)
Query: 206 DVVSWNTIIGALAESENFGKALELYLR-MSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+ SWN I +SEN +A+ LY R + D P+ T+ + +CA L +G I
Sbjct: 70 NTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEI 129
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-S 323
V+ + D+FV +A++ C +L+GA F + +++VSWN++I GY + +
Sbjct: 130 LGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWA 189
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSL 379
++ E+ G +P+E T V+ S + L L HC I G + + +L
Sbjct: 190 YEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANAL 249
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
M Y K G + A ++ V ++ G Y ++G + KL ++ D+V W
Sbjct: 250 MDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVG-YAQSGLLDMAWKLFDEMPDKDVVPW 308
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
N +I H KE L LF M+A I PD T VS LSACS+L L +G +H I+K
Sbjct: 309 NAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK 368
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
E+ S + + LIDMY KCG I ++++F E+ RN +TWTA+IS L L+G A A+
Sbjct: 369 HEL-SLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIA 427
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
F EM PD V + +L+AC HGGLV EG + F +M+ + + P++ HY C+VDLL
Sbjct: 428 YFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLL 487
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G L+EAE++I +MP +A++W C+
Sbjct: 488 GRAGLLEEAEELIKSMPIEADAVVWGALFFACR 520
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/530 (22%), Positives = 242/530 (45%), Gaps = 14/530 (2%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGL--YGRHGCLDEVVSVFEDMPRK 104
L C S++ ++ Q+Q+ ++ GL D F + L+ LD ++ +
Sbjct: 13 LEKCKSISQLK--QIQSQMVLTGLI-EDGFASSRLIAFCAISEWRDLDYCTNILFNTRNP 69
Query: 105 SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQI 163
+ +WN + F + + L+ +++ + ++ ++ + + + G +I
Sbjct: 70 NTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEI 129
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
G V+ GFD ++ V+N+++++ C + A KMF +RD+VSWN++I
Sbjct: 130 LGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWA 189
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
+AL Y M V+ + P++ T + V++SCA L++ LG+ H + +N L+ V + +AL
Sbjct: 190 YEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANAL 249
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNE 342
+D Y KC NLE A F ++NK +VSW +++GYA + L E+ P
Sbjct: 250 MDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWN 309
Query: 343 FTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL---AFVTAL 399
+ ++ + L L + M E + S +++ ++ G + + ++
Sbjct: 310 AMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKH 369
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ V + +Y + G+ + +++ +L + ++W +I+ A +G+ + F
Sbjct: 370 ELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYF 429
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
M + PD TF+ LLSAC + G + +S + ++D+ G+
Sbjct: 430 SEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGR 489
Query: 520 CGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
G + + ++ M + + + W AL A ++G +RA K +M+
Sbjct: 490 AGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMD 539
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 132/314 (42%), Gaps = 65/314 (20%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLY-----------MIN----------------- 34
D ++ N++I CG ++ A +MF MIN
Sbjct: 139 DSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYRE 198
Query: 35 ---RGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
G +P + T G++ SC L ++ G + + +NGL + AL+ +Y + G
Sbjct: 199 MKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLT-VPLANALMDMYMKCG 257
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH 149
L+ +F+ M K++V+W ++V + + G ++ LF E+ +V + G +H
Sbjct: 258 NLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVH 317
Query: 150 --------GLSNEQD-----------------------LEFGEQIHGLVIKNGFDYELLV 178
L NE L+ G IH + K+ + +
Sbjct: 318 ANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVAL 377
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+L++MY +C I A ++F+++ R+ ++W II LA N A+ + M + V
Sbjct: 378 GTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSV 437
Query: 239 FPNQTTFVYVINSC 252
P++ TF+ ++++C
Sbjct: 438 MPDEVTFLGLLSAC 451
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+P RN +++ +IIS + G A+ F MI+ P + TF GLLS C VE
Sbjct: 401 LPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEG 460
Query: 60 QLQASVLKNGLFCADAFVG-TALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
+ S + + + + ++ L GR G L+E + + MP V W ++
Sbjct: 461 RKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACR 520
Query: 118 KHGFV 122
HG V
Sbjct: 521 IHGNV 525
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 161/555 (29%), Positives = 282/555 (50%), Gaps = 36/555 (6%)
Query: 132 LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
++R+ L + V+ G HGL+ NGF+ + + N+LV MY +C
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 192 IWSAEKMFKDVEIR---DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT----- 243
+ A +F ++ R DV+SWN+I+ A +S N AL+L+ +M++ IV T
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTL-IVHEKPTNERSD 119
Query: 244 --TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ V ++ +C L+ K +H I+N DVFVG+AL+D YAKC +E A F+
Sbjct: 120 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 179
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVL----RSSLAFQ 356
+ K++VSWNA++ GY+ + + F L + ++ P + T++ V+ + + +
Sbjct: 180 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 239
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP-ANIIAGIY 415
L + +I G + S++++ A G S + + A ++ ++ N G
Sbjct: 240 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGME-IHAYSLKNCLLTLDNDFGGED 298
Query: 416 NRTGQYNETVKLLSQ---------------LERPDIVSWNIVIAACAHNGDYKEVLELFK 460
YN + + S+ LE ++V+W ++I A GD + L+LF
Sbjct: 299 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 358
Query: 461 YM--RAARIYPDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMY 517
M + P+ YT +L AC+ L + +G +H +++ + SS FV N LI+MY
Sbjct: 359 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMY 418
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
KCG + ++ +F+ M+ ++ I+WT++++ G++G AL+ F +M GF PD + +
Sbjct: 419 SKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFL 478
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
VL AC H G+V +G+ F+ M+ YG+ P +HY +DLL R+G L +A K + MP
Sbjct: 479 VVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPM 538
Query: 638 PPNALIWRTFLEGCQ 652
P A++W L C+
Sbjct: 539 EPTAVVWVALLSACR 553
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 154/605 (25%), Positives = 268/605 (44%), Gaps = 106/605 (17%)
Query: 32 MINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
M+ G FT +L +C L G+ + NG F ++ F+ AL+ +Y R G
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNG-FESNVFICNALVAMYSRCG 59
Query: 90 CLDEVVSVFEDMPRKSL---VTWNSIVSIFGKHGFVEDCMFLFCE--LVRSEVALTES-- 142
L+E +F+++ ++ + ++WNSIVS K + LF + L+ E E
Sbjct: 60 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 119
Query: 143 --SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
S V ++ + + + +++HG I+NG ++ V N+L++ Y +C + +A K+F
Sbjct: 120 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 179
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRM-----SVDIV----------------- 238
+E +DVVSWN ++ ++S NF A EL+ M +D+V
Sbjct: 180 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 239
Query: 239 -------------FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL----------EC 275
PN T + V+++CA L G IHA +KN L +
Sbjct: 240 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 299
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEI--SNKNIVSWNALILGYAS-KSSPTSIFLLIE 332
D+ V +AL+D Y+KC + + A F +I +N+V+W +I G+A S ++ L +E
Sbjct: 300 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 359
Query: 333 LLQ--LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
++ G PN +T S +L + H IR+G + + YVL +
Sbjct: 360 MISEPYGVAPNAYTISCILMAC-------AHLAAIRIGKQIHAYVL--------RHHQYD 404
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
+ FV AN + +Y++ G + + + + +SW ++ +G
Sbjct: 405 SSAYFV-----------ANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHG 453
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEII 503
E L++F MR A PD+ TF+ +L ACS + G S+ +GL + E
Sbjct: 454 RGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHY 513
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALE 559
+ ID+ + G + + K +M + + W AL+SA ++ A+ AL
Sbjct: 514 A-------YAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALN 566
Query: 560 KFREM 564
K EM
Sbjct: 567 KLVEM 571
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 131/594 (22%), Positives = 249/594 (41%), Gaps = 124/594 (20%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-------CDSLNPV- 56
+V+S+NSI+SA+ + AL +F M E ++S C SL V
Sbjct: 78 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 137
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNS----- 111
+ ++ + ++NG F D FVG AL+ Y + G ++ V VF M K +V+WN+
Sbjct: 138 QTKEVHGNAIRNGTFL-DVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGY 196
Query: 112 ------------------------------IVSIFGKHGFVEDCMFLFCELVRSEVALTE 141
+++ + + G + + +F +++ S
Sbjct: 197 SQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNC 256
Query: 142 SSFVGVIHGLSNEQDLEFGEQIHGLVIKN----------GFDYELLVANSLVNMYFQCAG 191
+ + V+ ++ G +IH +KN G D +L+V N+L++MY +C
Sbjct: 257 VTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 316
Query: 192 IWSAEKMFKDV--EIRDVVSWNTIIGALAESENFGKALELYLRMSVDI--VFPNQTTFVY 247
+A +F D+ E R+VV+W +IG A+ + AL+L++ M + V PN T
Sbjct: 317 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 376
Query: 248 VINSCAGLQNSILGKSIHAKVIKNAL--ECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
++ +CA L +GK IHA V+++ FV + L++ Y+KC +++ A F +S
Sbjct: 377 ILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQ 436
Query: 306 KNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
K+ +SW +++ GY + ++ + ++ + G+ P++ TF VL + HC
Sbjct: 437 KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYAC-------SHC-- 487
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
G++ L++ +++ + P R Y
Sbjct: 488 ----------------------GMVDQGLSYFDSMSADYGLTP---------RAEHYAYA 516
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+ LL++ R D + +K ++ + P +V+LLSAC
Sbjct: 517 IDLLARFGRLD---------------------KAWKTVKDMPMEPTAVVWVALLSACRVH 555
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
N+ L H L K E+ + + ++ ++Y G +I + M +
Sbjct: 556 SNVELAE--HALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGI 607
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR--GFEPTQFTFGG-LLSCDSLNPVE 57
+ +RNVV++ +I +++ G DAL++F+ MI+ G P +T L++C L +
Sbjct: 329 LEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIR 388
Query: 58 -GAQLQASVLKNGLFCADA-FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G Q+ A VL++ + + A FV L+ +Y + G +D VF+ M +KS ++W S+++
Sbjct: 389 IGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTG 448
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
+G HG + + +F ++ ++ + +F+ V++ S+
Sbjct: 449 YGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 486
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 168/581 (28%), Positives = 279/581 (48%), Gaps = 40/581 (6%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
+G ALL ++ R G L E VF M + L +WN +V + K G+ ++ + L+ ++
Sbjct: 131 LGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVG 190
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
+ +F V+ DL G ++H VI+ GF+ ++ V N+L+ MY +C I+SA
Sbjct: 191 IRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSAR 250
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
+F + RD +SWN +I E++ + L L+ M V P+ T VI++C L
Sbjct: 251 LVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALG 310
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ LG+ +H VIK +V V ++L+ ++ + A + FS++ K++VSW A+I
Sbjct: 311 DERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMIS 370
Query: 317 GYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYEN 371
GY P +++ G P+E T + VL + LL LH R G +
Sbjct: 371 GYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTS 430
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
Y V SL+ Y+K I AL ++ ++
Sbjct: 431 YVIVANSLIDMYSKCRCIDKAL--------------------------------EVFHRI 458
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
+++SW +I N E L F+ M + + P++ T VS+LSAC+++ L+ G
Sbjct: 459 PNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGK 517
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H +T + D F+ N L+DMY +CG + + FN +++V +W L++
Sbjct: 518 EIHAHALRTG-LGFDGFLPNALLDMYVRCGRMEPAWNQFNS-CEKDVASWNILLTGYAQQ 575
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G A+E F +M PD + ++L AC G+V +G+E FE M + + P + H
Sbjct: 576 GKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKH 635
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y VVDLL R G L++A + I MP P+ IW L C+
Sbjct: 636 YASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACR 676
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 156/559 (27%), Positives = 268/559 (47%), Gaps = 51/559 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSL-NPVEG 58
M +R++ S+N ++ Y++ GY ++AL ++ M+ G P +TF +L +C L + G
Sbjct: 155 MAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARG 214
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ V++ G F +D V AL+ +Y + G + VF+ MPR+ ++WN+++S
Sbjct: 215 REVHLHVIRYG-FESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMIS---- 269
Query: 119 HGFVED--CM------FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
G+ E+ C+ F+ E +T +S + L +E+ G ++HG VIK
Sbjct: 270 -GYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDER---LGREVHGYVIKT 325
Query: 171 GFDYELLVANSLVNMYFQCAGIWS-AEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
GF E+ V NSL+ M+ G W AE +F +E +D+VSW +I ++ KA+E
Sbjct: 326 GFVAEVSVNNSLIQMH-SSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVET 384
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
Y M + V P++ T V+++CAGL G +H + L V V ++L+D Y+K
Sbjct: 385 YTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSK 444
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL 349
C ++ A F I NKN++SW ++ILG + + L +PN T VL
Sbjct: 445 CRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVL 504
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
S ++ L C G E + + L ++GL D +P A++
Sbjct: 505 --SACARIGALSC-----GKEIHAHAL--------RTGLGFDGF-------LPNALL--- 539
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+Y R G+ + E+ D+ SWNI++ A G +ELF M + + P
Sbjct: 540 ---DMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNP 595
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D TF SLL ACS+ + G ++ I+ + ++D+ G+ G + + +
Sbjct: 596 DEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEF 655
Query: 530 FNEMT-DRNVITWTALISA 547
+M D + W AL++A
Sbjct: 656 IKKMPIDPDPAIWGALLNA 674
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 144/520 (27%), Positives = 260/520 (50%), Gaps = 32/520 (6%)
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
NS++ G +E + + +V++ E +++ ++ ++ G ++H V K
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
+ + N+L++M+ + + A +F + RD+ SWN ++G A++ F +AL L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
Y RM + P+ TF V+ +C GL + G+ +H VI+ E DV V +AL+ Y K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
C ++ A L F + ++ +SWNA+I GY + + L + + P+ T + V
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ + A R+G E + YV+ K+G +++ V
Sbjct: 303 ISACEALG-------DERLGREVHGYVI--------KTGFVAE-------------VSVN 334
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N + +++ G ++E + S++E D+VSW +I+ NG ++ +E + M +
Sbjct: 335 NSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVV 394
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD T S+LSAC+ L L G LH +T ++S V N LIDMY KC I +++
Sbjct: 395 PDEITIASVLSACAGLGLLDKGIMLHEFADRTG-LTSYVIVANSLIDMYSKCRCIDKALE 453
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F+ + ++NVI+WT++I L LN + AL F++M L KP+ V L++VL+AC G
Sbjct: 454 VFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACARIGA 512
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
+ G E+ R+ G+ + + ++D+ VR G ++ A
Sbjct: 513 LSCGKEIHAHALRT-GLGFDGFLPNALLDMYVRCGRMEPA 551
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/537 (25%), Positives = 242/537 (45%), Gaps = 70/537 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+ +S+N++IS Y + LR+F M +P T ++S C++L G
Sbjct: 256 MPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLG 315
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ V+K G F A+ V +L+ ++ GC DE VF M K LV+W +++S + K
Sbjct: 316 REVHGYVIKTG-FVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK 374
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G E + + + V E + V+ + L+ G +H + G ++V
Sbjct: 375 NGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIV 434
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
ANSL++MY +C I A ++F + ++V+SW +II L + +AL + +M + +
Sbjct: 435 ANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLK 494
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T V V+++CA + GK IHA ++ L D F+ +AL+D Y +C +E A
Sbjct: 495 -PNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWN 553
Query: 299 CFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+ K++ SWN L+ GYA + ++ L ++++ P+E TF+
Sbjct: 554 QFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFT----------- 601
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
SL+ + ++SG+++D L + ++ + P
Sbjct: 602 --------------------SLLCACSRSGMVTDGLEYFESMEHKFHIAP---------N 632
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
Y V LL + R + + +++++ I PD + +L
Sbjct: 633 LKHYASVVDLLGRAGRLE---------------------DAYEFIKKMPIDPDPAIWGAL 671
Query: 478 LSACSKLCNLALG--SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
L+AC N+ LG ++ H T+ + +CN+ D GK + KI E
Sbjct: 672 LNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADS-GKWDEVARVRKIMRE 727
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 7/204 (3%)
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
GD ++ L M+ ++ + T+++LL C + GS +H + KT +
Sbjct: 72 KGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKT-VTRLGVR 130
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+ N L+ M+ + G + + +F +M +R++ +W L+ G+ AL + M ++G
Sbjct: 131 LGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVG 190
Query: 569 FKPDRVALIAVLTACRHGGL--VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
+PD VL C GGL + G E+ + R YG E ++D + ++ + V+ G +
Sbjct: 191 IRPDVYTFPCVLRTC--GGLPDLARGREVHLHVIR-YGFESDVDVVNALITMYVKCGDIF 247
Query: 627 EAEKIITTMPFPPNALIWRTFLEG 650
A + MP + + W + G
Sbjct: 248 SARLVFDRMP-RRDRISWNAMISG 270
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 161/506 (31%), Positives = 256/506 (50%), Gaps = 23/506 (4%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS----AEKMFKDVEIRDVVSWNTIIGA 216
+Q+H IK G + ++ N + M F C + A ++F ++ ++ WNT+I
Sbjct: 35 QQVHCQAIKKGLNANPVLQNRV--MTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRG 92
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI---LGKSIHAKVIKNAL 273
+ + + LYL M V P++ TF ++ G I G+ +H V+K+ L
Sbjct: 93 YSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFK---GFTRDIALEYGRQLHGHVLKHGL 149
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY---ASKSSPTSIFLL 330
+ +VFV +ALV Y C L+ A F ++++WN +I Y +FL+
Sbjct: 150 QYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLV 209
Query: 331 IELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKS 386
+E Q+ P T VL + + L ++H + E+ + +++ YA
Sbjct: 210 MEDKQV--LPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADC 267
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
G + AL ++N + I++G N G+ + ++ D VSW +I
Sbjct: 268 GEMDSALGIFRSMNNRDIISWTTIVSGFTN-LGEIDVARNYFDKMPEKDYVSWTAMIDGY 326
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
+ +KE LELF+ M+A + PD +T VS+L+AC+ L L LG + I + +I +D
Sbjct: 327 IRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKI-KND 385
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
FV N LIDMY KCG + + IF EM+ R+ TWTA+I L +NG ++AL+ F M
Sbjct: 386 LFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLK 445
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
PD + I VL+AC H GLV +G + F RM +G+EP + HY C+VDLL R G LK
Sbjct: 446 ASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLK 505
Query: 627 EAEKIITTMPFPPNALIWRTFLEGCQ 652
EA ++I MP N+++W L GC+
Sbjct: 506 EAYEVIENMPIKANSIVWGALLAGCR 531
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/564 (23%), Positives = 263/564 (46%), Gaps = 16/564 (2%)
Query: 39 PTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRH--GCLDEVVS 96
PT L +C+S++ ++ QA +K GL A+ + ++ H G
Sbjct: 17 PTHPLISLLETCESMDQLQQVHCQA--IKKGL-NANPVLQNRVMTFCCTHEYGDFQYARR 73
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F+++P +L WN+++ + + F + + L+ E++R V +F + G + +
Sbjct: 74 LFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIA 133
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
LE+G Q+HG V+K+G Y + V +LV MY C + +A +F DV++WN II A
Sbjct: 134 LEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISA 193
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ F ++ L+L M V P T V V+++C+ L++ GK +H+ V +E +
Sbjct: 194 YNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESN 253
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQ 335
+ + +A++D YA C ++ A F ++N++I+SW ++ G+ + + ++ +
Sbjct: 254 LVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPE 313
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA--- 392
Y +RS+ + L+L + + E+ + S++T+ A G +
Sbjct: 314 KDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWI 373
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
++ I + N + +Y + G ++ + ++ + D +W +I A NG
Sbjct: 374 RTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHG 433
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
++ L++F M A I PD T++ +LSAC+ + G + I +
Sbjct: 434 EKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGC 493
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
L+D+ + G + + ++ M + N I W AL++ G + + + + + L +P
Sbjct: 494 LVDLLARAGRLKEAYEVIENMPIKANSIVWGALLA--GCRVYRESDMAEMVVKQILELEP 551
Query: 572 DRVALIAVL----TACRHGGLVRE 591
D A+ +L AC+ +RE
Sbjct: 552 DNGAVYVLLCNIYAACKRWNDLRE 575
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 244/505 (48%), Gaps = 48/505 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
+P+ N+ +N++I YSR + + + ++L M+ RG +P ++TF L + G
Sbjct: 78 IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYG 137
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL VLK+GL + FV TAL+ +Y G LD VF+ P+ ++TWN I+S + K
Sbjct: 138 RQLHGHVLKHGL-QYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 196
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E+ LF + +V T + V V+ S +DL G+++H V + L++
Sbjct: 197 VGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVL 256
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA-------------------- 218
N++++MY C + SA +F+ + RD++SW TI+
Sbjct: 257 ENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDY 316
Query: 219 -----------ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
S F +ALEL+ M V P++ T V V+ +CA L LG+ I
Sbjct: 317 VSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTY 376
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTS 326
+ +N ++ D+FV +AL+D Y KC +++ A F E+S ++ +W A+I+G A + +
Sbjct: 377 IDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKA 436
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL-HCLIIRM----GYENYEYVLGSLMT 381
+ + +L+ P+E T+ VL + L+ +RM G E G L+
Sbjct: 437 LDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVD 496
Query: 382 SYAKSGLISDALAFVTALNIP-RAVVPANIIAG--IYNRTGQYNETVKLLSQLERPDIVS 438
A++G + +A + + I ++V ++AG +Y + VK + +LE PD +
Sbjct: 497 LLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE-PDNGA 555
Query: 439 WNIVI----AACAHNGDYKEVLELF 459
+++ AAC D +E+ ++
Sbjct: 556 VYVLLCNIYAACKRWNDLRELRQMM 580
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 168/581 (28%), Positives = 274/581 (47%), Gaps = 39/581 (6%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
+G A+L + R G VF MP + + +WN +V +GK GF+E+ + L+ ++ +
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
+F V+ DL G ++H V++ G E+ V N+LV MY +C + +A
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAAR 250
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
K+F + + D +SWN +I E+ LEL+L M D V PN T V + L
Sbjct: 251 KVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLS 310
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ K IHA +K DV ++L+ Y+ + A FS + ++ +SW A+I
Sbjct: 311 DLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMIS 370
Query: 317 GYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYEN 371
GY P + L+++ P++ T + L + + L +LH L G+
Sbjct: 371 GYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIR 430
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
Y V +L+ YAKS +I A +++ +
Sbjct: 431 YIVVANALVEMYAKSKIIEKA--------------------------------IEVFKYM 458
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
D++SW+ +IA N E L F++M A + P++ TF++ L+AC+ +L G
Sbjct: 459 PDKDVISWSSMIAGFCFNHKNFEALYYFRHM-LADVKPNSVTFIAALAACAATGSLRCGK 517
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H + + + I+S+ +V N L+D+Y KCG G + F ++V++W +++ +
Sbjct: 518 EIHAHVLR-QGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAH 576
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G AL F EM G PD V +A+L C G+V +G ELF M Y + P + H
Sbjct: 577 GHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKH 636
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y C+VDLL R G L E I MP P+A +W L GC+
Sbjct: 637 YACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCR 677
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 149/558 (26%), Positives = 254/558 (45%), Gaps = 48/558 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+R+V S+N ++ Y + G++E+AL ++ M+ G P +TF +L SC + + G
Sbjct: 155 MPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMG 214
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ A VL+ GL + V AL+ +Y + G ++ VF+ M ++WN++++ +
Sbjct: 215 REVHAHVLRFGL-GVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFE 273
Query: 119 HGFVEDCMFLFCELVRSEVA--LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ E + LF ++ EV L + V V GL + DL+F ++IH L +K GF ++
Sbjct: 274 NHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLS--DLDFAKEIHALAVKRGFATDV 331
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
NSL+ MY + A +F +E RD +SW +I ++ KALE+Y M V+
Sbjct: 332 AFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVN 391
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+ T + +CA L +G +H + V +ALV+ YAK +E A
Sbjct: 392 NVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKA 451
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + +K+++SW+++I G+ + +PN TF L + A
Sbjct: 452 IEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLADVKPNSVTFIAALAACAATG 511
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L ++H ++R G + YV +L+ Y K G A A A
Sbjct: 512 SLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGT----------- 560
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
D+VSWNI++A +G L F M +PD
Sbjct: 561 ---------------------KDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEV 599
Query: 473 TFVSLLSACSKLCNLALGSSL-HGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIF 530
TFV+LL CS+ ++ G L H + +K I+ + + C ++D+ + G +
Sbjct: 600 TFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYAC--MVDLLSRVGRLTEGYNFI 657
Query: 531 NEMT-DRNVITWTALISA 547
N M + W AL++
Sbjct: 658 NRMPITPDAAVWGALLNG 675
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 233/487 (47%), Gaps = 33/487 (6%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF------GGLLSCDSLNPVEG 58
+ +S+N++I+ + E L +FL+M+ EP T GLLS
Sbjct: 260 DCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDF----A 315
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ A +K G F D +L+ +Y G + E +VF M + ++W +++S + K
Sbjct: 316 KEIHALAVKRG-FATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEK 374
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF + + ++ + + V+ + + + ++ L+ G ++H L GF ++V
Sbjct: 375 NGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVV 434
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN+LV MY + I A ++FK + +DV+SW+++I + +AL + M D V
Sbjct: 435 ANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLAD-V 493
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN TF+ + +CA + GK IHA V++ + + +V +AL+D Y KC A
Sbjct: 494 KPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWA 553
Query: 299 CFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSL 353
F K++VSWN ++ G+ A ++ E+L+ G P+E TF +L R+ +
Sbjct: 554 QFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGM 613
Query: 354 AFQLLQL-HCLIIRMGYENYEYV-----LGSLMTSYAKSGLISDALAFVTALNI-PRAVV 406
Q +L H + E Y V ++ ++ G +++ F+ + I P A V
Sbjct: 614 VSQGWELFHSMT-----EKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAV 668
Query: 407 PANIIAGIY-NRTGQYNE-TVKLLSQLERPDIVSWNIVIAAC-AHNGDYKEVLELFKYMR 463
++ G +R + E K++ +LE P+ ++++++ A G + EV ++ K MR
Sbjct: 669 WGALLNGCRIHRNIELGELAAKIVLELE-PNDAGYHVLLSDLYADAGMWAEVSKVRKTMR 727
Query: 464 AARIYPD 470
+ D
Sbjct: 728 VKGLEHD 734
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 184/690 (26%), Positives = 324/690 (46%), Gaps = 95/690 (13%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
N+++ AY CG + DA R+ L I P T +V+ NG
Sbjct: 63 NTLLHAYLSCGALSDARRLLLMDIA---HPNVITH-------------------NVMLNG 100
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFL- 128
Y + G L + V +F MP + + +WN+++S G+ + +L
Sbjct: 101 ---------------YAKLGRLSDAVELFGRMPARDVASWNTLMS-----GYFQSRQYLV 140
Query: 129 ----FCELVRSEVALTES--------------------SFVGVIHGLSNEQDLEFGEQIH 164
F + RS + + + ++ ++ D E +
Sbjct: 141 SLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALV 200
Query: 165 GLVIKNGF------------DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNT 212
+ ++ G + + NS++ Y + G+ A ++F + RDVVSWN
Sbjct: 201 DMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNM 260
Query: 213 IIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
++ AL++S +AL++ + M V + TT+ + +CA L + GK +HA+VI+N
Sbjct: 261 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 320
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG---YASKSSPTSIF- 328
D +V SALV+ YAK + A F+ + ++N V+W LI G Y + +F
Sbjct: 321 PHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFN 380
Query: 329 -LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSY 383
+ EL+ L ++F + ++ + L QLH L ++ G V SL++ Y
Sbjct: 381 QMRAELMTL----DQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMY 436
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
AK + A A +N V ++I Y++ G + + + ++++WN ++
Sbjct: 437 AKCDNLQSAEAIFRFMNEKDIVSWTSMITA-YSQVGNVAKAREFFDGMSEKNVITWNAML 495
Query: 444 AACAHNGDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
A +G ++ L ++K M + + PD T+V+L C+ L LG + G K +
Sbjct: 496 GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGL 555
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
I DT V N +I MY KCG I + K+F+ + +++++W A+I+ +G ++A+E F
Sbjct: 556 II-DTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFD 614
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
++ G KPD ++ +AVL+ C H GLV+EG F+ M R++ + P ++H+ C+VDLL R
Sbjct: 615 DILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRA 674
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
GHL EA+ +I MP P A +W L C+
Sbjct: 675 GHLTEAKDLIDDMPMKPTAEVWGALLSACK 704
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/522 (27%), Positives = 242/522 (46%), Gaps = 84/522 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
MP+R+VVS+N ++SA S+ G V +AL M + M ++G T+ L +C L+ + G
Sbjct: 250 MPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWG 309
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A V++N L D +V +AL+ LY + GC E VF + ++ V W ++S F +
Sbjct: 310 KQLHAQVIRN-LPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQ 368
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + LF ++ + L + + +I G + DL G Q+H L +K+G ++V
Sbjct: 369 YGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVV 428
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY-------- 230
+NSL++MY +C + SAE +F+ + +D+VSW ++I A ++ N KA E +
Sbjct: 429 SNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNV 488
Query: 231 -------------------LRM-----SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
LRM S + V P+ T+V + CA L + LG I
Sbjct: 489 ITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIG 548
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPT 325
+ +K L D V +A++ Y+KC + A F ++ K+IVSWNA+I GY+
Sbjct: 549 RTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQ 608
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAK 385
+I + ++L+ G +P+ ++ VL + +
Sbjct: 609 AIEIFDDILKRGAKPDYISYVAVL-------------------------------SGCSH 637
Query: 386 SGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWN 440
SGL+ + + + + P + + + R G E L+ + +P W
Sbjct: 638 SGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWG 697
Query: 441 IVIAACAHNGD-------YKEVLEL-----FKYMRAARIYPD 470
+++AC +G+ K V EL YM A+IY D
Sbjct: 698 ALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYAD 739
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 170/354 (48%), Gaps = 26/354 (7%)
Query: 242 QTTFVYVINSCAGLQNS---ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
Q T ++ SC L ++ +L H VI + + +++ YAK L A
Sbjct: 62 QNTLLHAYLSCGALSDARRLLLMDIAHPNVITH---------NVMLNGYAKLGRLSDAVE 112
Query: 299 CFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYR-PNEFTFSHVLRS----- 351
F + +++ SWN L+ GY S+ S+ + + + G PN FT + ++S
Sbjct: 113 LFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALG 172
Query: 352 --SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
SLA QLL ++ + ++ V +L+ + + G + A + P +
Sbjct: 173 WHSLALQLL---AMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNS 229
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
++AG Y +T + ++L + D+VSWN++++A + +G +E L++ M++ +
Sbjct: 230 MLAG-YVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRL 288
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D+ T+ S L+AC++L +L G LH + + + D +V + L+++Y K G + +
Sbjct: 289 DSTTYTSSLTACARLSSLRWGKQLHAQVIRN-LPHIDPYVASALVELYAKSGCFKEAKGV 347
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
FN + DRN + WT LIS G ++E F +M D+ AL +++ C
Sbjct: 348 FNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC 401
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 148/324 (45%), Gaps = 39/324 (12%)
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H ++ +G + ++ +L+ +Y G +SDA + V+ N++ Y + G+
Sbjct: 47 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 106
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLS 479
++ V+L ++ D+ SWN +++ + Y LE F M R+ +P+ +T +
Sbjct: 107 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 166
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS----------------- 522
+C L +L L +++K + D+ V L+DM+ +CG+
Sbjct: 167 SCGALGWHSLALQLLAMVQKFD-SQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMF 225
Query: 523 --------------IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+ ++++F+ M +R+V++W ++SAL +G + AL+ +M+ G
Sbjct: 226 CRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKG 285
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHLK 626
+ D + LTAC +R G +L ++ R+ P +D Y +V+L + G K
Sbjct: 286 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL---PHIDPYVASALVELYAKSGCFK 342
Query: 627 EAEKIITTMPFPPNALIWRTFLEG 650
EA+ + ++ N + W + G
Sbjct: 343 EAKGVFNSL-HDRNNVAWTVLISG 365
>gi|302799100|ref|XP_002981309.1| hypothetical protein SELMODRAFT_114322 [Selaginella moellendorffii]
gi|300150849|gb|EFJ17497.1| hypothetical protein SELMODRAFT_114322 [Selaginella moellendorffii]
Length = 682
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 190/660 (28%), Positives = 315/660 (47%), Gaps = 50/660 (7%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQ 62
N+ S+ I++A +R G +AL + MI G P F +L C + +E G
Sbjct: 22 NLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVCFVTILDLCAATADLEQGKVAH 81
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR----KSLVTWNSIVSIFGK 118
A +L G+ + +G AL+ +YG+ LD + F+ M + +VTWNS+++ F
Sbjct: 82 AWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRMEHQDHGRDVVTWNSLLAAFTH 141
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G++E+ LF E+ + + + V+ S ++ G+ H V+ G + +
Sbjct: 142 NGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCSGDRQ---GKLFHDRVLDLGLQGDEFL 198
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD-I 237
NSLV MY +C + + +F+ ++ +D++SWN +I A + +A+EL + ++
Sbjct: 199 MNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLEARLGSSEEAVELLREIDLEGF 258
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P++ TF+ V+++C+ L + L +I V + D+ +G+A+V+ + K L+ A
Sbjct: 259 PEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDDDLLLGNAVVNMFGKSGCLDAAR 318
Query: 298 LCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + KN+VSWN LI GYA + L ++ Q G + N TF +L +
Sbjct: 319 ATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQEGVKANSVTFVSLLDACSTIP 378
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L +LH I G E + V +L+ Y K L + + ++
Sbjct: 379 ALDFGRELHLRITAAGLELHTVVATALINMYGK----------CQELQLAQELLER---- 424
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
Y TG D V+WN + AA A NG E LELF M+ +
Sbjct: 425 --YQSTGLR-------------DSVTWNAIAAAYAQNGHPLEALELFWRMQQQGVRAQEA 469
Query: 473 TFVSLLSACSKLCNL-ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TFV++L AC +L A G S I K +SD + L+ MY KCG + ++
Sbjct: 470 TFVTILDACGDSSSLLAHGRS----IAKLSSWTSDA-IKGALLGMYSKCGCVDDALAALQ 524
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
++ R ++ WT++++A G A AL +M+ G PD VA AV+ AC H GL+ E
Sbjct: 525 SLSSRGLLAWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHAGLLHE 584
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ ++ YG Y CVVD+L R G L+EAE+++ MP+ P++L W L C
Sbjct: 585 ALVRLAWVSGDYGTAMGAGLYECVVDVLARMGRLQEAEELMHAMPYEPDSLAWMALLGAC 644
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 147/536 (27%), Positives = 263/536 (49%), Gaps = 48/536 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQ 62
R+VV++NS+++A++ GY+E+A R+F M G +P+ T +L SC +G
Sbjct: 127 RDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCS--GDRQGKLFH 184
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
VL GL D F+ +L+ +Y R G L+E VF + +K +++WN ++S+ + G
Sbjct: 185 DRVLDLGLQ-GDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLEARLGSS 243
Query: 123 EDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E+ + L E+ + E +F+ V+ S DL+ I LV GFD +LL+ N+
Sbjct: 244 EEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDDDLLLGNA 303
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
+VNM+ + + +A F + +++VVSWN +I A++ + LEL+ +M + V N
Sbjct: 304 VVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQEGVKAN 363
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TFV ++++C+ + G+ +H ++ LE V +AL++ Y KC L+ A
Sbjct: 364 SVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGKCQELQLAQELLE 423
Query: 302 EISN---KNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
+ ++ V+WNA+ YA P ++ L + Q G R E TF +L +
Sbjct: 424 RYQSTGLRDSVTWNAIAAAYAQNGHPLEALELFWRMQQQGVRAQEATFVTILDACGDSSS 483
Query: 358 LQLHCL-IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L H I ++ + + G+L+ Y+K G + DALA + +L+ R ++ + Y
Sbjct: 484 LLAHGRSIAKLSSWTSDAIKGALLGMYSKCGCVDDALAALQSLS-SRGLLAWTSMLAAYA 542
Query: 417 RTGQYNETVKLLSQLER----PDIVSWNIVIAACAH--------------NGDYKEVL-- 456
G+ +E +++L Q++ PD V+++ V+ AC+H +GDY +
Sbjct: 543 HVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHAGLLHEALVRLAWVSGDYGTAMGA 602
Query: 457 -----------------ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
E + M A PD+ +++LL AC+ +L G+ G
Sbjct: 603 GLYECVVDVLARMGRLQEAEELMHAMPYEPDSLAWMALLGACTVHGDLERGARTAG 658
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/510 (26%), Positives = 235/510 (46%), Gaps = 42/510 (8%)
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
++G+ G ++ +F + R +L +W I++ ++G + + L ++
Sbjct: 1 MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVC 60
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFD-YELLVANSLVNMYFQCAGIWSAEKMFKDV 202
FV ++ + DLE G+ H ++ G + ++ N+L+NMY +C + A F +
Sbjct: 61 FVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRM 120
Query: 203 EI----RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
E RDVV+WN+++ A + +A L+ M V+ + P+ T V+ SC+G +
Sbjct: 121 EHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCSGDRQ- 179
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI-LG 317
GK H +V+ L+ D F+ ++LV YA+C LE + L F I K+I+SWN +I L
Sbjct: 180 --GKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLE 237
Query: 318 YASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
SS ++ LL E+ G+ P+E TF V+ + L L C I+
Sbjct: 238 ARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDL-CFTIQ---------- 286
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
V++ ++ N + ++ ++G + +L ++
Sbjct: 287 -----------------ELVSSAGFDDDLLLGNAVVNMFGKSGCLDAARATFDRLPVKNV 329
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
VSWN +I+ A N + LELF+ M + ++ TFVSLL ACS + L G LH
Sbjct: 330 VSWNCLISGYAQNLQGRRCLELFRQMDQEGVKANSVTFVSLLDACSTIPALDFGRELHLR 389
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD---RNVITWTALISALGLNGF 553
I + T V LI+MYGKC + + ++ R+ +TW A+ +A NG
Sbjct: 390 ITAAG-LELHTVVATALINMYGKCQELQLAQELLERYQSTGLRDSVTWNAIAAAYAQNGH 448
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTAC 583
ALE F M+ G + + +L AC
Sbjct: 449 PLEALELFWRMQQQGVRAQEATFVTILDAC 478
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 214/451 (47%), Gaps = 45/451 (9%)
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
M+ +C I A ++F + ++ SW I+ A A + +AL L RM + P+
Sbjct: 1 MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVC 60
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV-GSALVDFYAKCDNLEGAHLCFSEI 303
FV +++ CA + GK HA ++ +E V G+AL++ Y KC NL+ A F +
Sbjct: 61 FVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRM 120
Query: 304 SN----KNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL 358
+ +++V+WN+L+ + L + +++ G +P+ T + VL S +
Sbjct: 121 EHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCSGDRQG 180
Query: 359 QL-HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+L H ++ +G + E+++ SL+ YA R
Sbjct: 181 KLFHDRVLDLGLQGDEFLMNSLVKMYA--------------------------------R 208
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI-YPDNYTFVS 476
G+ E+ + +++ DI+SWN++I+ A G +E +EL + + PD TF+S
Sbjct: 209 CGRLEESRLVFRAIDQKDIISWNVMISLEARLGSSEEAVELLREIDLEGFPEPDEVTFIS 268
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
++ ACS L +L L ++ L+ D + N +++M+GK G + ++ F+ + +
Sbjct: 269 VVDACSCLGDLDLCFTIQELVSSAG-FDDDLLLGNAVVNMFGKSGCLDAARATFDRLPVK 327
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
NV++W LIS N +R LE FR+M+ G K + V +++L AC + G EL
Sbjct: 328 NVVSWNCLISGYAQNLQGRRCLELFRQMDQEGVKANSVTFVSLLDACSTIPALDFGRELH 387
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
R+ + G+E H L+ YG +E
Sbjct: 388 LRIT-AAGLEL---HTVVATALINMYGKCQE 414
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 8/222 (3%)
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++ + G ++ L RP++ SW +++AACA NG E L L + M PD
Sbjct: 1 MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVC 60
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FV++L C+ +L G H I + SS + N LI+MYGKC ++ + F+ M
Sbjct: 61 FVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRM 120
Query: 534 TD----RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
R+V+TW +L++A NG+ + A F+EME G KP V L VL +C
Sbjct: 121 EHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCSGD--- 177
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
R+G +LF G++ + + +V + R G L+E+ +
Sbjct: 178 RQG-KLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLV 218
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 13/268 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P +NVVS+N +IS Y++ L +F M G + TF LL +C ++ ++ G
Sbjct: 324 LPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQEGVKANSVTFVSLLDACSTIPALDFG 383
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCL---DEVVSVFEDMPRKSLVTWNSIVSI 115
+L + GL V TAL+ +YG+ L E++ ++ + VTWN+I +
Sbjct: 384 RELHLRITAAGLEL-HTVVATALINMYGKCQELQLAQELLERYQSTGLRDSVTWNAIAAA 442
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ ++G + + LF + + V E++FV ++ + L HG I +
Sbjct: 443 YAQNGHPLEALELFWRMQQQGVRAQEATFVTILDACGDSSSL----LAHGRSIAKLSSWT 498
Query: 176 L-LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ +L+ MY +C + A + + R +++W +++ A A +AL + +M
Sbjct: 499 SDAIKGALLGMYSKCGCVDDALAALQSLSSRGLLAWTSMLAAYAHVGRASEALRVLGQMQ 558
Query: 235 VDIVFPNQTTFVYVINSC--AGLQNSIL 260
D V P+ F V+ +C AGL + L
Sbjct: 559 HDGVVPDDVAFSAVVFACSHAGLLHEAL 586
>gi|147773389|emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera]
Length = 672
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 189/656 (28%), Positives = 316/656 (48%), Gaps = 84/656 (12%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVL 66
+N++I YS G V L ++ M+ G P TF +L D+ +G ++ V+
Sbjct: 10 WNTLIRGYSIAG-VGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGXVV 68
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K G F +D FVG LL YG G L + VF++MP K LV+WN+++ +F +G + +
Sbjct: 69 KLG-FESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGCWXEVL 127
Query: 127 FLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
LF E+ +RS + S V V+ + +D +IHG V+K G +++++V N+L+++
Sbjct: 128 DLFGEMRLRSGLRPNVVSVVSVLPVCAGVEDEVTASEIHGYVVKVGLEFQVIVGNALLDV 187
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C + + +++F ++ +++VSWN II + ++ AL+++ M + + PN T
Sbjct: 188 YGKCGNVAALKQVFGEMVEKNLVSWNAIITSFGYKGHYRDALDMFRLMIDEGLKPNSITI 247
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
+ L+ G+ +H I+ LE D+F+ ++L+D YAK + A F ++
Sbjct: 248 SSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDA 307
Query: 306 KNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLLQL 360
KN+VSWNA+I +A ++ ++ L+ ++ G PN TF++VL R L ++
Sbjct: 308 KNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEI 367
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H I MG +V +L YAKSG L + R V ++
Sbjct: 368 HARSIHMGCAFDLFVSNALTDMYAKSG----------HLKLARNVFDTSL---------- 407
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
D VS+NI+I + D E L LF M+ + DN +F+ LSA
Sbjct: 408 -------------RDEVSYNILIVGXSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSA 454
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C+ L + G +HG + + ++ FV N L+D Y KCG IG + IF+ MT+++V +
Sbjct: 455 CANLTAIKQGKEIHGFLLR-KLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVAS 513
Query: 541 WTALISALGLNGFAQRAL----EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
W +I G+ G A+ E R+ + D V+ IAVL+AC HG
Sbjct: 514 WNTMILGYGMLGELDTAIDLLTENMRKDDVE--SDDSVSFIAVLSACSHG---------- 561
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G ++EA ++I +P P+A IW L C+
Sbjct: 562 ------------------------RAGLMEEAAELIKGLPIVPDANIWGALLGACR 593
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 152/513 (29%), Positives = 258/513 (50%), Gaps = 34/513 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLLS-CDSL-NPVE 57
MP++++VS+N++I +S G + L +F M + G P + +L C + + V
Sbjct: 102 MPEKDLVSWNTMIGVFSVNGCWXEVLDLFGEMRLRSGLRPNVVSVVSVLPVCAGVEDEVT 161
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+++ V+K GL VG ALL +YG+ G + + VF +M K+LV+WN+I++ FG
Sbjct: 162 ASEIHGYVVKVGLEF-QVIVGNALLDVYGKCGNVAALKQVFGEMVEKNLVSWNAIITSFG 220
Query: 118 KHGFVEDCMFLFCELVRSEV---ALTESSFVGVIHGLSNEQDLEF---GEQIHGLVIKNG 171
G D + +F ++ + ++T SSF+ V+ +LEF G ++HG I+ G
Sbjct: 221 YKGHYRDALDMFRLMIDEGLKPNSITISSFLPVL------VELEFFKAGREVHGSSIRMG 274
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
+ ++ +ANSL++MY + A +F ++ ++VVSWN +I A++ A+ L
Sbjct: 275 LESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVR 334
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
+M PN TF V+ +CA + GK IHA+ I D+FV +AL D YAK
Sbjct: 335 QMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSG 394
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLR 350
+L+ A F + S ++ VS+N LI+G + S S+ L E+ +G + + +F L
Sbjct: 395 HLKLARNVF-DTSLRDEVSYNILIVGXSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALS 453
Query: 351 S----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+ + Q ++H ++R + + +V SL+ Y K G I A +
Sbjct: 454 ACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVAS 513
Query: 407 PANIIAGIYNRTGQYNETVKLLSQ------LERPDIVSWNIVIAACAHN--GDYKEVLEL 458
+I G Y G+ + + LL++ +E D VS+ V++AC+H G +E EL
Sbjct: 514 WNTMILG-YGMLGELDTAIDLLTENMRKDDVESDDSVSFIAVLSACSHGRAGLMEEAAEL 572
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
K + I PD + +LL AC NL L +
Sbjct: 573 IKGL---PIVPDANIWGALLGACRIYGNLELAA 602
>gi|125555089|gb|EAZ00695.1| hypothetical protein OsI_22717 [Oryza sativa Indica Group]
Length = 992
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 187/653 (28%), Positives = 312/653 (47%), Gaps = 40/653 (6%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEGAQLQ 62
N+VS NS+IS + G E A +F M +G P T +L C S G +
Sbjct: 308 NLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVH 367
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
V+K GL V +AL+ +Y + G LD V +F + KS + WNS++S + +
Sbjct: 368 GMVIKFGL-AEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKW 426
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
M + V + + VI + +DL G+ IH +++ + V N+L
Sbjct: 427 NMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNAL 486
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
+ MY C + K+F +E+R ++SWNTII AE+ + L + +M + + +
Sbjct: 487 LAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDL 546
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T + +I+S + +++ +G+S+H+ I++ DV V +AL+ Y C ++ F
Sbjct: 547 VTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDS 606
Query: 303 ISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLR-SSLAFQLLQL 360
+S+ N +S+NAL+ GY + I L +++ +PN T ++L Q +
Sbjct: 607 LSSVNTISYNALMTGYRKNNLFKEILPLFYHMIKNDQKPNIITLLNLLPICHSQLQGKTV 666
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H IR N+ + SL TS A+ +Y+R
Sbjct: 667 HSYAIR----NFSKLETSLFTS---------------------AIC-------MYSRFNN 694
Query: 421 YNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
L + ER +IV WN +++AC + F+ ++ + D T ++L+S
Sbjct: 695 LEYCHNLFCLVGERNNIV-WNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALIS 753
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
ACS+L L + I + V N LIDM+ +CGSI + KIF+ +++ +
Sbjct: 754 ACSQLGKADLAECVTA-IALQKGFDGTIVVLNALIDMHSRCGSISFARKIFDISMEKDSV 812
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W+ +I+A ++G AL+ F M G KPD + ++VL+AC G + +G LF M
Sbjct: 813 SWSTMINAYSMHGDGGSALDLFLMMVSTGIKPDDITFVSVLSACSRSGFLEQGRTLFRSM 872
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+G+ P M+HY C+VDLL R GHL EA I+TTMPF P+ + + L C+
Sbjct: 873 LADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACR 925
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 160/659 (24%), Positives = 297/659 (45%), Gaps = 48/659 (7%)
Query: 6 VVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQA 63
V N + +S G+ + L ++ + F FTF ++ +C +++ + G ++
Sbjct: 109 VYDLNIAVRCFSDHGFHRELLGLYREVC--AFGSDNFTFPPVIRACAAVSCLRLGKEVHC 166
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
V++ G + V TALL +Y + G +D VF+ M + L++WN+++S + +G +
Sbjct: 167 RVVRTG-HGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLL 225
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ ++ + SS VG++ +S + G+ +H +K+G + V + +
Sbjct: 226 EAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESVTPAFI 285
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
+MY + S+ +F + ++VS N++I + + KA ++ M + PN
Sbjct: 286 SMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLV 345
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
T V ++ C+ G+S+H VIK L V V SALV Y+K +L+ A FS +
Sbjct: 346 TVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSV 405
Query: 304 SNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ--- 359
+ K+ + WN+LI GY + + + +Q+ G P+ T V+ + L
Sbjct: 406 TEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGK 465
Query: 360 -LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
+H +R E E V+ +L+ YA
Sbjct: 466 SIHAYAVRSRLELNESVMNALLAMYAD--------------------------------C 493
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
GQ + KL +E ++SWN +I+ A NGD L F MR A + D T ++L+
Sbjct: 494 GQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALI 553
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
S+ S + ++ +G S+H L ++ + D V N LI MY CG I + K+F+ ++ N
Sbjct: 554 SSLSAIEDITVGESVHSLAIRSG-CNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNT 612
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
I++ AL++ N + L F M KP+ + L+ +L C H L +G +
Sbjct: 613 ISYNALMTGYRKNNLFKEILPLFYHMIKNDQKPNIITLLNLLPIC-HSQL--QGKTVHSY 669
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIA 657
R++ + E + + + R+ +L+ + + N ++W L C +C+ A
Sbjct: 670 AIRNFS-KLETSLFTSAICMYSRFNNLEYCHNLFCLVG-ERNNIVWNAILSACVQCKQA 726
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 167/654 (25%), Positives = 296/654 (45%), Gaps = 40/654 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--G 58
M R+++S+N++IS YS G + +A M GF P + G++S S V G
Sbjct: 203 MKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAG 262
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L A LK+G+ D V A + +Y G L +S+F +LV+ NS++S+ +
Sbjct: 263 DPLHAFALKSGVL-GDESVTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQ 321
Query: 119 HGFVEDCMFLFCELVRSEVALTE-SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
HG E +F L+R + + + V ++ SN + GE +HG+VIK G ++
Sbjct: 322 HGAWEKAFGVF-RLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVS 380
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V ++LV+MY + + SA +F V + + WN++I + + + RM ++
Sbjct: 381 VVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEG 440
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ T + VI+ C ++ +GKSIHA +++ LE + V +AL+ YA C L
Sbjct: 441 VDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICC 500
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + + ++SWN +I G+A + F + + + F L
Sbjct: 501 KLFHTMEVRTLISWNTIISGFAENGDSVACLRF--------------FCQMRLADMQFDL 546
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+ L LI + + +G + S LA + N+ +V AN + +Y
Sbjct: 547 VTLIALISSLSAIE-DITVGESVHS----------LAIRSGCNLDVSV--ANALITMYTN 593
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G KL L + +S+N ++ N +KE+L LF +M P+ T ++L
Sbjct: 594 CGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKEILPLFYHMIKNDQKPNIITLLNL 653
Query: 478 LSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
L C G ++H I+ + + F I MY + ++ +F + +R
Sbjct: 654 LPICHSQLQ---GKTVHSYAIRNFSKLETSLFTS--AICMYSRFNNLEYCHNLFCLVGER 708
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
N I W A++SA A A + FR+++FL K D V ++A+++AC G + E
Sbjct: 709 NNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKA-DLAECV 767
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ G + + + ++D+ R G + A KI + +++ W T +
Sbjct: 768 TAIALQKGFDGTIVVLNALIDMHSRCGSISFARKIF-DISMEKDSVSWSTMINA 820
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/549 (24%), Positives = 252/549 (45%), Gaps = 55/549 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR----GFEPTQFTFGGLLS-CDSLNP 55
+ +++ + +NS+IS Y V + M + + R G +P T ++S C
Sbjct: 405 VTEKSQLLWNSLISGY----LVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTED 460
Query: 56 VE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+ G + A +++ L ++ V ALL +Y G L +F M ++L++WN+I+S
Sbjct: 461 LHVGKSIHAYAVRSRLELNES-VMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIIS 519
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
F ++G C+ FC++ +++ + + +I LS +D+ GE +H L I++G +
Sbjct: 520 GFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNL 579
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ VAN+L+ MY C I + EK+F + + +S+N ++ ++ F + L L+ M
Sbjct: 580 DVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKEILPLFYHMI 639
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ PN T + ++ C + + GK++H+ I+N + + + ++ + Y++ +NLE
Sbjct: 640 KNDQKPNIITLLNLLPIC---HSQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLE 696
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
H F + +N + WNA++ ++ Q G + F
Sbjct: 697 YCHNLFCLVGERNNIVWNAILSA------------CVQCKQAGVAFDYFR---------Q 735
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q L + + M L S + K+ L A +V N + +
Sbjct: 736 IQFLNVKTDAVTM------LALISACSQLGKADLAECVTAIALQKGFDGTIVVLNALIDM 789
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
++R G + K+ D VSW+ +I A + +GD L+LF M + I PD+ TF
Sbjct: 790 HSRCGSISFARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSTGIKPDDITF 849
Query: 475 VSLLSACSKLCNLALGSSL-------HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
VS+LSACS+ L G +L HG+ + E + C ++D+ G+ G + +
Sbjct: 850 VSVLSACSRSGFLEQGRTLFRSMLADHGITPRME-----HYAC--MVDLLGRTGHLDEAY 902
Query: 528 KIFNEMTDR 536
I M R
Sbjct: 903 DIVTTMPFR 911
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 127/527 (24%), Positives = 231/527 (43%), Gaps = 34/527 (6%)
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM--PRKSLVTWNSIVSIF 116
++L A + G DA V + Y G +VF R + N V F
Sbjct: 60 SKLHARLAVTGALREDASVVAGAVERYLFFGKPASAAAVFAGFYRGRAEVYDLNIAVRCF 119
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
HGF + + L+ E+ +F VI + L G+++H V++ G +
Sbjct: 120 SDHGFHRELLGLYREVC--AFGSDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNV 177
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V +L++MY + + + ++F ++ RD++SWN +I + + +A E +M D
Sbjct: 178 GVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQD 237
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
PN ++ V +++ +GL G +HA +K+ + D V A + YA +L +
Sbjct: 238 GFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESVTPAFISMYAAFGHLSSS 297
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF 355
F + N+VS N++I + F + L++ G PN T +L F
Sbjct: 298 LSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNF 357
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
G + E V G ++ K GL ++ ++ V+AL +Y
Sbjct: 358 -----------FGINHGESVHGMVI----KFGL-AEQVSVVSAL------------VSMY 389
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
++ G + V L S + + WN +I+ N + V+ + M+ + PD T +
Sbjct: 390 SKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVI 449
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S++S C +L +G S+H ++ + +++ V N L+ MY CG + K+F+ M
Sbjct: 450 SVISKCRHTEDLHVGKSIHAYAVRSRLELNES-VMNALLAMYADCGQLSICCKLFHTMEV 508
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
R +I+W +IS NG + L F +M + D V LIA++++
Sbjct: 509 RTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISS 555
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 4/196 (2%)
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
R ++ NI + + +G ++E+L L++ + A DN+TF ++ AC+ + L LG
Sbjct: 106 RAEVYDLNIAVRCFSDHGFHRELLGLYREVCA--FGSDNFTFPPVIRACAAVSCLRLGKE 163
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+H + +T + V L+DMY K G + S ++F+ M R++I+W A+IS LNG
Sbjct: 164 VHCRVVRTGH-GGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNG 222
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY 612
A E ++M+ GF+P+ +L+ +++ G VR+ + GV +
Sbjct: 223 CLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLG-VRDAGDPLHAFALKSGVLGDESVT 281
Query: 613 HCVVDLLVRYGHLKEA 628
+ + +GHL +
Sbjct: 282 PAFISMYAAFGHLSSS 297
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGAQ 60
+++ VS++++I+AYS G AL +FL M++ G +P TF +LS S + +G
Sbjct: 808 EKDSVSWSTMINAYSMHGDGGSALDLFLMMVSTGIKPDDITFVSVLSACSRSGFLEQGRT 867
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKH 119
L S+L + ++ L GR G LDE + MP R S S++ H
Sbjct: 868 LFRSMLADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACRFH 927
Query: 120 G 120
G
Sbjct: 928 G 928
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 184/690 (26%), Positives = 324/690 (46%), Gaps = 95/690 (13%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
N+++ AY CG + DA R+ L I P T +V+ NG
Sbjct: 43 NTLLHAYLSCGALSDARRLLLMDIA---HPNVITH-------------------NVMLNG 80
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFL- 128
Y + G L + V +F MP + + +WN+++S G+ + +L
Sbjct: 81 ---------------YAKLGRLSDAVELFGRMPARDVASWNTLMS-----GYFQSRQYLV 120
Query: 129 ----FCELVRSEVALTES--------------------SFVGVIHGLSNEQDLEFGEQIH 164
F + RS + + + ++ ++ D E +
Sbjct: 121 SLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALV 180
Query: 165 GLVIKNGF------------DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNT 212
+ ++ G + + NS++ Y + G+ A ++F + RDVVSWN
Sbjct: 181 DMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNM 240
Query: 213 IIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
++ AL++S +AL++ + M V + TT+ + +CA L + GK +HA+VI+N
Sbjct: 241 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL 300
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG---YASKSSPTSIF- 328
D +V SALV+ YAK + A F+ + ++N V+W LI G Y + +F
Sbjct: 301 PHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFN 360
Query: 329 -LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSY 383
+ EL+ L ++F + ++ + L QLH L ++ G V SL++ Y
Sbjct: 361 QMRAELMTL----DQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMY 416
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
AK + A A +N V ++I Y++ G + + + ++++WN ++
Sbjct: 417 AKCDNLQSAEAIFRFMNEKDIVSWTSMITA-YSQVGNVAKAREFFDGMSEKNVITWNAML 475
Query: 444 AACAHNGDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
A +G ++ L ++K M + + PD T+V+L C+ L LG + G K +
Sbjct: 476 GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGL 535
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
I DT V N +I MY KCG I + K+F+ + +++++W A+I+ +G ++A+E F
Sbjct: 536 II-DTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFD 594
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
++ G KPD ++ +AVL+ C H GLV+EG F+ M R++ + P ++H+ C+VDLL R
Sbjct: 595 DILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRA 654
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
GHL EA+ +I MP P A +W L C+
Sbjct: 655 GHLTEAKDLIDDMPMKPTAEVWGALLSACK 684
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/522 (27%), Positives = 242/522 (46%), Gaps = 84/522 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
MP+R+VVS+N ++SA S+ G V +AL M + M ++G T+ L +C L+ + G
Sbjct: 230 MPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWG 289
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A V++N L D +V +AL+ LY + GC E VF + ++ V W ++S F +
Sbjct: 290 KQLHAQVIRN-LPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQ 348
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + LF ++ + L + + +I G + DL G Q+H L +K+G ++V
Sbjct: 349 YGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVV 408
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY-------- 230
+NSL++MY +C + SAE +F+ + +D+VSW ++I A ++ N KA E +
Sbjct: 409 SNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNV 468
Query: 231 -------------------LRM-----SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
LRM S + V P+ T+V + CA L + LG I
Sbjct: 469 ITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIG 528
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPT 325
+ +K L D V +A++ Y+KC + A F ++ K+IVSWNA+I GY+
Sbjct: 529 RTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQ 588
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAK 385
+I + ++L+ G +P+ ++ VL + +
Sbjct: 589 AIEIFDDILKRGAKPDYISYVAVL-------------------------------SGCSH 617
Query: 386 SGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWN 440
SGL+ + + + + P + + + R G E L+ + +P W
Sbjct: 618 SGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWG 677
Query: 441 IVIAACAHNGD-------YKEVLEL-----FKYMRAARIYPD 470
+++AC +G+ K V EL YM A+IY D
Sbjct: 678 ALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYAD 719
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 170/354 (48%), Gaps = 26/354 (7%)
Query: 242 QTTFVYVINSCAGLQNS---ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
Q T ++ SC L ++ +L H VI + + +++ YAK L A
Sbjct: 42 QNTLLHAYLSCGALSDARRLLLMDIAHPNVITH---------NVMLNGYAKLGRLSDAVE 92
Query: 299 CFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYR-PNEFTFSHVLRS----- 351
F + +++ SWN L+ GY S+ S+ + + + G PN FT + ++S
Sbjct: 93 LFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALG 152
Query: 352 --SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
SLA QLL ++ + ++ V +L+ + + G + A + P +
Sbjct: 153 WHSLALQLL---AMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNS 209
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
++AG Y +T + ++L + D+VSWN++++A + +G +E L++ M++ +
Sbjct: 210 MLAG-YVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRL 268
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D+ T+ S L+AC++L +L G LH + + + D +V + L+++Y K G + +
Sbjct: 269 DSTTYTSSLTACARLSSLRWGKQLHAQVIRN-LPHIDPYVASALVELYAKSGCFKEAKGV 327
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
FN + DRN + WT LIS G ++E F +M D+ AL +++ C
Sbjct: 328 FNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC 381
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 148/324 (45%), Gaps = 39/324 (12%)
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H ++ +G + ++ +L+ +Y G +SDA + V+ N++ Y + G+
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 86
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLS 479
++ V+L ++ D+ SWN +++ + Y LE F M R+ +P+ +T +
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 146
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS----------------- 522
+C L +L L +++K + D+ V L+DM+ +CG+
Sbjct: 147 SCGALGWHSLALQLLAMVQKFD-SQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMF 205
Query: 523 --------------IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+ ++++F+ M +R+V++W ++SAL +G + AL+ +M+ G
Sbjct: 206 CRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKG 265
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHLK 626
+ D + LTAC +R G +L ++ R+ P +D Y +V+L + G K
Sbjct: 266 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNL---PHIDPYVASALVELYAKSGCFK 322
Query: 627 EAEKIITTMPFPPNALIWRTFLEG 650
EA+ + ++ N + W + G
Sbjct: 323 EAKGVFNSL-HDRNNVAWTVLISG 345
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/506 (31%), Positives = 256/506 (50%), Gaps = 23/506 (4%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS----AEKMFKDVEIRDVVSWNTIIGA 216
+Q+H IK G + ++ N + M F C + A ++F ++ ++ WNT+I
Sbjct: 56 QQVHCQAIKKGLNANPVLQNRV--MTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRG 113
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI---LGKSIHAKVIKNAL 273
+ + + LYL M V P++ TF ++ G I G+ +H V+K+ L
Sbjct: 114 YSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFK---GFTRDIALEYGRQLHGHVLKHGL 170
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY---ASKSSPTSIFLL 330
+ +VFV +ALV Y C L+ A F ++++WN +I Y +FL+
Sbjct: 171 QYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLV 230
Query: 331 IELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKS 386
+E Q+ P T VL + + L ++H + E+ + +++ YA
Sbjct: 231 MEDKQV--LPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADC 288
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
G + AL ++N + I++G N G+ + ++ D VSW +I
Sbjct: 289 GEMDSALGIFRSMNNRDIISWTTIVSGFTN-LGEIDVARNYFDKMPEKDYVSWTAMIDGY 347
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
+ +KE LELF+ M+A + PD +T VS+L+AC+ L L LG + I + +I +D
Sbjct: 348 IRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKI-KND 406
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
FV N LIDMY KCG + + IF EM+ R+ TWTA+I L +NG ++AL+ F M
Sbjct: 407 LFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLK 466
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
PD + I VL+AC H GLV +G + F RM +G+EP + HY C+VDLL R G LK
Sbjct: 467 ASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLK 526
Query: 627 EAEKIITTMPFPPNALIWRTFLEGCQ 652
EA ++I MP N+++W L GC+
Sbjct: 527 EAYEVIENMPIKANSIVWGALLAGCR 552
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/564 (23%), Positives = 263/564 (46%), Gaps = 16/564 (2%)
Query: 39 PTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRH--GCLDEVVS 96
PT L +C+S++ ++ QA +K GL A+ + ++ H G
Sbjct: 38 PTHPLISLLETCESMDQLQQVHCQA--IKKGL-NANPVLQNRVMTFCCTHEYGDFQYARR 94
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F+++P +L WN+++ + + F + + L+ E++R V +F + G + +
Sbjct: 95 LFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIA 154
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
LE+G Q+HG V+K+G Y + V +LV MY C + +A +F DV++WN II A
Sbjct: 155 LEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISA 214
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ F ++ L+L M V P T V V+++C+ L++ GK +H+ V +E +
Sbjct: 215 YNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESN 274
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQ 335
+ + +A++D YA C ++ A F ++N++I+SW ++ G+ + + ++ +
Sbjct: 275 LVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPE 334
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA--- 392
Y +RS+ + L+L + + E+ + S++T+ A G +
Sbjct: 335 KDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWI 394
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
++ I + N + +Y + G ++ + ++ + D +W +I A NG
Sbjct: 395 RTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHG 454
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
++ L++F M A I PD T++ +LSAC+ + G + I +
Sbjct: 455 EKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGC 514
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
L+D+ + G + + ++ M + N I W AL++ G + + + + + L +P
Sbjct: 515 LVDLLARAGRLKEAYEVIENMPIKANSIVWGALLA--GCRVYRESDMAEMVVKQILELEP 572
Query: 572 DRVALIAVL----TACRHGGLVRE 591
D A+ +L AC+ +RE
Sbjct: 573 DNGAVYVLLCNIYAACKRWNDLRE 596
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 244/505 (48%), Gaps = 48/505 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
+P+ N+ +N++I YSR + + + ++L M+ RG +P ++TF L + G
Sbjct: 99 IPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYG 158
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL VLK+GL + FV TAL+ +Y G LD VF+ P+ ++TWN I+S + K
Sbjct: 159 RQLHGHVLKHGL-QYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 217
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E+ LF + +V T + V V+ S +DL G+++H V + L++
Sbjct: 218 VGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVL 277
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA-------------------- 218
N++++MY C + SA +F+ + RD++SW TI+
Sbjct: 278 ENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDY 337
Query: 219 -----------ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
S F +ALEL+ M V P++ T V V+ +CA L LG+ I
Sbjct: 338 VSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTY 397
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTS 326
+ +N ++ D+FV +AL+D Y KC +++ A F E+S ++ +W A+I+G A + +
Sbjct: 398 IDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKA 457
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL-HCLIIRM----GYENYEYVLGSLMT 381
+ + +L+ P+E T+ VL + L+ +RM G E G L+
Sbjct: 458 LDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVD 517
Query: 382 SYAKSGLISDALAFVTALNIP-RAVVPANIIAG--IYNRTGQYNETVKLLSQLERPDIVS 438
A++G + +A + + I ++V ++AG +Y + VK + +LE PD +
Sbjct: 518 LLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE-PDNGA 576
Query: 439 WNIVI----AACAHNGDYKEVLELF 459
+++ AAC D +E+ ++
Sbjct: 577 VYVLLCNIYAACKRWNDLRELRQMM 601
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 181/635 (28%), Positives = 311/635 (48%), Gaps = 51/635 (8%)
Query: 32 MINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGL-FCADAFVGTALLGLYGRHGC 90
M+ GF+P + LL SL G QA L + + +AF +L Y R G
Sbjct: 25 MVKTGFDPATYRLNLLLH--SLIS-SGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQ 81
Query: 91 LDEVVSVFEDMPR--KSLVTWNSIVSIFGKH--GFVEDCMFLFCELVRSEVA---LTESS 143
L +F P + VTW ++ F D + LF +++R VA +T ++
Sbjct: 82 LSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVAT 141
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE-LLVANSLVNMYFQCAGIWSAEKMFKDV 202
+ + +H +K G + ++V N+L++ Y + + +A ++F+++
Sbjct: 142 VLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEM 201
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
RD V++N ++ ++ + +AL+L+ M + + TF V+ G+ + LG+
Sbjct: 202 PHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGR 261
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SK 321
+H ++ A +VFV ++L+DFY+KCD L+ F E+ ++ VS+N +I GYA ++
Sbjct: 262 QVHG-LVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNR 320
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLG 377
+ + L E+ L + ++ +L + + + Q+H ++ +G + + V
Sbjct: 321 CASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGN 380
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
+L+ Y+K G++ A N ++TG V
Sbjct: 381 ALIDMYSKCGMLDAAKTNFINKN---------------DKTG-----------------V 408
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SW +I C NG +E L+LF MR A + PD TF S + A S L + LG LH +
Sbjct: 409 SWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYL 468
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
++ +SS F + L+DMY KCG + +++ F+EM +RN I+W A+ISA G A+ A
Sbjct: 469 IRSGHMSS-VFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNA 527
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
++ F M GFKPD V ++VL+AC H GL E M+ FE M YG+ P +HY CV+D
Sbjct: 528 IKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVID 587
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L R G + ++++ MPF + +IW + L C+
Sbjct: 588 TLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCR 622
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 220/458 (48%), Gaps = 39/458 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEG 58
MP R+ V++N+++ S+ G +AL +F M +G T+FTF +L+ + + G
Sbjct: 201 MPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLG 260
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ V + ++ FV +LL Y + CLDE+ +F +M + V++N +++ +
Sbjct: 261 RQVHGLVAR--ATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAW 318
Query: 119 HGFVEDCMFLFCELVR---SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ + LF E+ AL +S + V + + + G+QIH ++ G E
Sbjct: 319 NRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPH---IGIGKQIHAQLVLLGLSSE 375
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
LV N+L++MY +C + +A+ F + + VSW +I ++ +AL+L+ M
Sbjct: 376 DLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRR 435
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ P++ TF I + + L LG+ +H+ +I++ VF GSAL+D Y KC L+
Sbjct: 436 AGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDE 495
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLA 354
A F E+ +N +SWNA+I YA + + E +L G++P+ TF VL S+ +
Sbjct: 496 ALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVL-SACS 554
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
L C+ E YEY + Y+ + D L
Sbjct: 555 HNGLAEECMKYFELME-YEYGISPWKEHYS---CVIDTLG-------------------- 590
Query: 415 YNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
R G++++ ++L ++ D + W+ ++ +C +G+
Sbjct: 591 --RVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGN 626
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 7/229 (3%)
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
L +++ G++ Y L L+ S SG ++ A A + N + Y+R+G
Sbjct: 21 LDARMVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSG 80
Query: 420 QYNETVKLL--SQLERPDIVSWNIVIA--ACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
Q + L S D V+W ++I A A + + LF+ M + PD T
Sbjct: 81 QLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVA 140
Query: 476 SLLS---ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
++L+ A + +SLH K ++ S+ VCN L+D Y K G + ++ ++F E
Sbjct: 141 TVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQE 200
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
M R+ +T+ A++ G AL+ F M G R VLT
Sbjct: 201 MPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLT 249
>gi|347954478|gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
Length = 794
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 179/688 (26%), Positives = 330/688 (47%), Gaps = 49/688 (7%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNGL 70
+S+ + G + +AL + M R +G +L + G Q+ A +LK G
Sbjct: 6 VSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGD 65
Query: 71 FCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
F A + ++ T L+ Y + L+ +F + +++ +W +I+ + + G E + F
Sbjct: 66 FYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGF 125
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
E++ + + V Q FG +HG V K G + + VA+SL +MY +C
Sbjct: 126 VEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKC 185
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A K+F + R+ V+WN ++ ++ +A+ L M + + P + T +
Sbjct: 186 GVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCL 245
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
++ A + GK HA I N LE D +G+++++FY K +E A + F + K++V
Sbjct: 246 SASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVV 305
Query: 310 SWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL----HCLI 364
+WN LI GY + + +L++ + + T S ++ ++ + Q L+L C
Sbjct: 306 TWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYC 365
Query: 365 IRMGYENYEYVLGS--------------------------------LMTSYAKSGLISDA 392
IR G E+ + VL S L+++YA SGL +A
Sbjct: 366 IRHGLES-DIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEA 424
Query: 393 LAFVTAL---NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER----PDIVSWNIVIAA 445
L + ++P V+ N+I R GQ NE ++ Q++ P+++SW ++
Sbjct: 425 LRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNG 484
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
NG +E + + M+ +R+ P+ +T LSAC+ L +L G S+HG I + + S
Sbjct: 485 LVQNGCSEEAILFLRKMQESRLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYSF 544
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
+ L+DMY KCG I + ++F + + A+ISA L G + A+ +R +E
Sbjct: 545 SASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLE 604
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G KPD + + ++L+ C +G V + +E+F M +G++P ++HY +VDLL G
Sbjct: 605 DGGVKPDNITITSLLS-CNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLASAGET 663
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQR 653
+A +++ MP+ P+A + ++ E C +
Sbjct: 664 DKALRLMEEMPYKPDARMVQSLFESCSK 691
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 150/620 (24%), Positives = 287/620 (46%), Gaps = 114/620 (18%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVE-G 58
+PDRN V++N+++ Y + G E+A+R+ M G EPT+ T LS + + +E G
Sbjct: 198 IPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEG 257
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q A + NGL D +GT++L Y + G ++ +F+ M K +VTWN ++S + +
Sbjct: 258 KQSHAIAIVNGLEL-DNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQ 316
Query: 119 HGFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G VE+ +++ C+L+R E + + ++ ++ Q+L+ G++I I++G + +++
Sbjct: 317 QGLVEEAIYM-CQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIV 375
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+A++ V+MY +C I +A+K+F +D++ WNT++ A A+S G+AL L+ M ++
Sbjct: 376 LASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLES 435
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN T+ +I S L+N G+ AK ++F+ +
Sbjct: 436 VPPNVITWNLIILSL--LRN---GQVNEAK--------EMFLQMQSSGIFP--------- 473
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
N++SW ++ G S +I L ++ + RPN FT + L S
Sbjct: 474 ---------NLISWTTMMNGLVQNGCSEEAILFLRKMQESRLRPNAFTITVAL--SACAN 522
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L LH G + Y++ + S++ S I ++V +Y
Sbjct: 523 LASLH-----FGRSIHGYIIRNQQYSFSAS--------------IETSLVD------MYA 557
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G N+ ++ ++ +N +I+A A G +E + L++ + + PDN T S
Sbjct: 558 KCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITS 617
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LLS CN YG+ + ++++F++M +
Sbjct: 618 LLS-----CN------------------------------YGR--DVNQAIEVFSDMVSK 640
Query: 537 NVIT-----WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ + + ++ L G +AL R ME + +KPD + ++ +C +
Sbjct: 641 HGMKPCLEHYGLMVDLLASAGETDKAL---RLMEEMPYKPDARMVQSLFESCSK----QH 693
Query: 592 GMELFERMNRSYGVEPEMDH 611
EL E +++ + +E E D+
Sbjct: 694 KTELVEYLSK-HLLESEPDN 712
>gi|302761660|ref|XP_002964252.1| hypothetical protein SELMODRAFT_82268 [Selaginella moellendorffii]
gi|300167981|gb|EFJ34585.1| hypothetical protein SELMODRAFT_82268 [Selaginella moellendorffii]
Length = 740
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 183/656 (27%), Positives = 321/656 (48%), Gaps = 48/656 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQA 63
++ V++N++I A++ G A+ ++ M + F G L +C +L ++ +
Sbjct: 74 KDPVTWNTMIGAFTHNGQPRLAVDLYARMGSGDRNSVTF-LGVLEACSALGDLDLGRTVD 132
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
S + + D VGTA++G+YGR ++E F+ MP K++V+WN++V+ + ++G
Sbjct: 133 SSIAGSEWRDDVVVGTAVVGMYGRCRSIEEARQRFDSMPVKNVVSWNALVTSYARNGHPC 192
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ E+ L +F+ VI + L G IH + + G + N+L+
Sbjct: 193 GALRALREMDLDGTKLNPVTFLLVIEVATQLGSLSLGRSIHLRITRGGDGGGTRLENALI 252
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI-VFPNQ 242
+MY + + + ++F+ + +DVVSW +I A A++ + ALELY RM ++ V P++
Sbjct: 253 SMYGKLENLEESLRVFEVMANKDVVSWTAMITAYAQNGHERLALELYRRMELEKRVRPDR 312
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T+ V+ +C+GL + GK I+A+V + + D + ++LV Y KC LE A F
Sbjct: 313 VTYAAVLGACSGLGDLSTGKEIYARVCSSDFDVDAALKTSLVGLYGKCHCLEDAKEVFDS 372
Query: 303 ISNKNIVSWNALILGYASKSSPT-SIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL 360
IS+++ +++NA++ YA P ++ L +++ L G P + +F+ L + A +
Sbjct: 373 ISSRDRLAYNAMLAAYAQNGHPDDALNLYRQMMDLEGVEPTDTSFAVALMACTALK---- 428
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
L+T + G I A I V A + G Y G
Sbjct: 429 -----------------DLVTGKSLHGRIQVA-------GIKLDEVLATTLVGFYGEVGS 464
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
E ++ Q+ D+ S++ +I A + NG + ++ M I PD F+S+LSA
Sbjct: 465 LEEAERIFEQMPVKDVFSYSAMIGAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFISVLSA 524
Query: 481 CSKLCNLALGSSLHGLIKKTEII----SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
CS NLA + +H TEI+ +D + L+ MY K G++ S +IF M R
Sbjct: 525 CSS--NLA--TEVH-----TEIVHAGFEADGALGTALVCMYAKSGNLEESRRIFGAMKSR 575
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+ ++WTA+ISA +G + L F+ M G L ++L + G V F
Sbjct: 576 DSVSWTAMISAFARHGCEAKLL--FQGMALDGIDAKGSTLTSMLVSYSQSG-VDAARGFF 632
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M +G P +HY C+VDLL R G + EA++++ +MP P+ + W T L C+
Sbjct: 633 VAMQGDFGTCPAAEHYSCLVDLLARSGRVGEAKELVDSMPLEPDFVPWMTLLGACK 688
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 164/627 (26%), Positives = 283/627 (45%), Gaps = 43/627 (6%)
Query: 32 MINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
M R P + T +S S N G QL A+ + L + + +L+ +YG+
Sbjct: 1 MEERRILPHRTTLVSAISACASSGNLARGRQLHAAAIARRLD-RETLLANSLIAMYGKCH 59
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH 149
L E +F + RK VTWN+++ F +G + L+ + + +F+GV+
Sbjct: 60 SLAEAERLFHSLERKDPVTWNTMIGAFTHNGQPRLAVDLYARMGSGD--RNSVTFLGVLE 117
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
S DL+ G + + + + +++V ++V MY +C I A + F + +++VVS
Sbjct: 118 ACSALGDLDLGRTVDSSIAGSEWRDDVVVGTAVVGMYGRCRSIEEARQRFDSMPVKNVVS 177
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
WN ++ + A + + AL M +D N TF+ VI L + LG+SIH ++
Sbjct: 178 WNALVTSYARNGHPCGALRALREMDLDGTKLNPVTFLLVIEVATQLGSLSLGRSIHLRIT 237
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFL 329
+ + +AL+ Y K +NLE + F ++NK++VSW A+I YA
Sbjct: 238 RGGDGGGTRLENALISMYGKLENLEESLRVFEVMANKDVVSWTAMITAYAQNGHERLALE 297
Query: 330 LIELLQL--GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
L ++L RP+ T++ VL + L G E Y V S A
Sbjct: 298 LYRRMELEKRVRPDRVTYAAVLGACSGLGDLS-------TGKEIYARVCSSDFDVDA--- 347
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
A T+L G+Y + + ++ + D +++N ++AA A
Sbjct: 348 ------ALKTSL------------VGLYGKCHCLEDAKEVFDSISSRDRLAYNAMLAAYA 389
Query: 448 HNGDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
NG + L L++ M + P + +F L AC+ L +L G SLHG I + I D
Sbjct: 390 QNGHPDDALNLYRQMMDLEGVEPTDTSFAVALMACTALKDLVTGKSLHGRI-QVAGIKLD 448
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
+ L+ YG+ GS+ + +IF +M ++V +++A+I A NG RA+ + EM+
Sbjct: 449 EVLATTLVGFYGEVGSLEEAERIFEQMPVKDVFSYSAMIGAYSQNGCEGRAMTIYAEMDQ 508
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
G KPD VA I+VL+AC E+ G E + +V + + G+L+
Sbjct: 509 QGIKPDEVAFISVLSACSSNLATEVHTEIVH-----AGFEADGALGTALVCMYAKSGNLE 563
Query: 627 EAEKIITTMPFPPNALIWRTFLEGCQR 653
E+ +I M +++ W + R
Sbjct: 564 ESRRIFGAMK-SRDSVSWTAMISAFAR 589
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 237/464 (51%), Gaps = 47/464 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLL-SCDSLNPVE- 57
M +++VVS+ ++I+AY++ G+ AL ++ M + + P + T+ +L +C L +
Sbjct: 271 MANKDVVSWTAMITAYAQNGHERLALELYRRMELEKRVRPDRVTYAAVLGACSGLGDLST 330
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ A V + F DA + T+L+GLYG+ CL++ VF+ + + + +N++++ +
Sbjct: 331 GKEIYARVCSSD-FDVDAALKTSLVGLYGKCHCLEDAKEVFDSISSRDRLAYNAMLAAYA 389
Query: 118 KHGFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G +D + L+ +++ E V T++SF + + +DL G+ +HG + G +
Sbjct: 390 QNGHPDDALNLYRQMMDLEGVEPTDTSFAVALMACTALKDLVTGKSLHGRIQVAGIKLDE 449
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++A +LV Y + + AE++F+ + ++DV S++ +IGA +++ G+A+ +Y M
Sbjct: 450 VLATTLVGFYGEVGSLEEAERIFEQMPVKDVFSYSAMIGAYSQNGCEGRAMTIYAEMDQQ 509
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ P++ F+ V+++C +S L +H +++ E D +G+ALV YAK NLE +
Sbjct: 510 GIKPDEVAFISVLSAC----SSNLATEVHTEIVHAGFEADGALGTALVCMYAKSGNLEES 565
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + +++ VSW A+I +A H + L FQ
Sbjct: 566 RRIFGAMKSRDSVSWTAMISAFAR--------------------------HGCEAKLLFQ 599
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIA 412
+ L G + L S++ SY++SG + A F A+ PA + +
Sbjct: 600 GMALD------GIDAKGSTLTSMLVSYSQSG-VDAARGFFVAMQGDFGTCPAAEHYSCLV 652
Query: 413 GIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEV 455
+ R+G+ E +L+ + PD V W ++ AC +GD ++
Sbjct: 653 DLLARSGRVGEAKELVDSMPLEPDFVPWMTLLGACKTHGDLEQA 696
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 139/572 (24%), Positives = 271/572 (47%), Gaps = 50/572 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP +NVVS+N+++++Y+R G+ ALR M G + TF LL + +
Sbjct: 170 MPVKNVVSWNALVTSYARNGHPCGALRALREMDLDGTKLNPVTF--LLVIEVATQLGSLS 227
Query: 61 LQASV---LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
L S+ + G + AL+ +YG+ L+E + VFE M K +V+W ++++ +
Sbjct: 228 LGRSIHLRITRGGDGGGTRLENALISMYGKLENLEESLRVFEVMANKDVVSWTAMITAYA 287
Query: 118 KHGFVEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G + L+ + + V ++ V+ S DL G++I+ V + FD +
Sbjct: 288 QNGHERLALELYRRMELEKRVRPDRVTYAAVLGACSGLGDLSTGKEIYARVCSSDFDVDA 347
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR-MSV 235
+ SLV +Y +C + A+++F + RD +++N ++ A A++ + AL LY + M +
Sbjct: 348 ALKTSLVGLYGKCHCLEDAKEVFDSISSRDRLAYNAMLAAYAQNGHPDDALNLYRQMMDL 407
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ V P T+F + +C L++ + GKS+H ++ ++ D + + LV FY + +LE
Sbjct: 408 EGVEPTDTSFAVALMACTALKDLVTGKSLHGRIQVAGIKLDEVLATTLVGFYGEVGSLEE 467
Query: 296 AHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F ++ K++ S++A+I Y+ ++ + E+ Q G +P+E F VL + +
Sbjct: 468 AERIFEQMPVKDVFSYSAMIGAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFISVLSACSS 527
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
++H I+ G+E + +L+ YAKS
Sbjct: 528 NLATEVHTEIVHAGFEADGALGTALVCMYAKS---------------------------- 559
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
G E+ ++ ++ D VSW +I+A A +G E LF+ M I T
Sbjct: 560 ----GNLEESRRIFGAMKSRDSVSWTAMISAFARHG--CEAKLLFQGMALDGIDAKGSTL 613
Query: 475 VSLLSACSKL-CNLALG--SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
S+L + S+ + A G ++ G +++ + C L+D+ + G +G + ++ +
Sbjct: 614 TSMLVSYSQSGVDAARGFFVAMQGDFGTCP--AAEHYSC--LVDLLARSGRVGEAKELVD 669
Query: 532 EMT-DRNVITWTALISALGLNGFAQRALEKFR 562
M + + + W L+ A +G ++A R
Sbjct: 670 SMPLEPDFVPWMTLLGACKTHGDLEQAKSAAR 701
>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/606 (28%), Positives = 298/606 (49%), Gaps = 34/606 (5%)
Query: 52 SLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP--RKSLVTW 109
S N + G + +LK L + + V L LY ++ VF+++P R + + W
Sbjct: 12 SRNLILGQIIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAW 71
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
+ ++ + +GF E + L+ +++ S V T+ ++ V+ + + +E G+ IH V
Sbjct: 72 DLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGKLIHSHVKC 131
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
+ F ++ V +LV+ Y +C + A K+F ++ RD+V+WN +I + + L
Sbjct: 132 SNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHCCLTDVIGL 191
Query: 230 YLRMS-VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
+L M D + PN +T V + + GK++H + D+ V + ++D YA
Sbjct: 192 FLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYA 251
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
K + A F KN V+W+A+I GY E+++ E +
Sbjct: 252 KSKCIIYARRVFDSDFKKNEVTWSAMIGGYVEN----------EMIK---EAGEVFLQML 298
Query: 349 LRSSLAFQLLQLHCLIIRMGYENY-EYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVV 406
+ + +A + + +I MG + + G + YA K+G I D +
Sbjct: 299 VNADMAM-VTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILD-------------LT 344
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
N + Y + G + + +++ DIVS+N +I+ C N +E LF M+++
Sbjct: 345 VGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSG 404
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
I PD T + +L+ACS L L GSS HG + +T +CN L+DMY KCG + +
Sbjct: 405 IRPDITTLLGILTACSNLAALGHGSSCHGYCV-VNGYAVNTSICNALMDMYTKCGKLYVA 463
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
++F+ M R++++W ++ G++G + AL F M+ G PD V L+A+L+AC H
Sbjct: 464 KRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHS 523
Query: 587 GLVREGMELFERMNR-SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GLV EG +LF M+R + V P +DHY+C+ DLL R G+L EA + MPF P+ +
Sbjct: 524 GLVDEGKQLFNSMSRGDFNVIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLG 583
Query: 646 TFLEGC 651
T L C
Sbjct: 584 TLLSAC 589
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 158/586 (26%), Positives = 281/586 (47%), Gaps = 39/586 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ 60
P N ++++ +I AY G+ E AL ++ M+N G PT+FT+ +L +C L +E +
Sbjct: 64 PRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGK 123
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L S +K F AD +V TAL+ Y + G LD + VF++MP++ +V WN+++S F H
Sbjct: 124 LIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHC 183
Query: 121 FVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ D + LF ++ RS+ ++ S+ VG+ L L G+ +HG + GF +L+V
Sbjct: 184 CLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV--DI 237
++++Y + I A ++F ++ V+W+ +IG E+E +A E++L+M V D+
Sbjct: 244 TGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNADM 303
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
++ CA + G+ +H IK D+ VG+ ++ FYAK +L A
Sbjct: 304 AMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAF 363
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQ 356
F+EI K+IVS+N+LI G F L ++ G RP+ T +L +
Sbjct: 364 RQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLA 423
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L G + Y ++ YA + I +AL +Y
Sbjct: 424 ALG-------HGSSCHGYC---VVNGYAVNTSICNAL------------------MDMYT 455
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G+ ++ + + DIVSWN ++ +G KE L LF M+ ++PD T ++
Sbjct: 456 KCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLA 515
Query: 477 LLSACSKLCNLALGSSLHGLIKKTE---IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+LSACS + G L + + + I D + C + D+ + G + + N+M
Sbjct: 516 ILSACSHSGLVDEGKQLFNSMSRGDFNVIPRLDHYNC--MTDLLARAGYLDEAYDFVNKM 573
Query: 534 T-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
+ ++ L+SA + E ++M+ LG + + L++
Sbjct: 574 PFEPDIRVLGTLLSACWTYKNVELGNEVSKKMQSLGETTESLVLLS 619
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 209/459 (45%), Gaps = 46/459 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLLSCDSLNPV--E 57
MP R++V++N++IS +S + D + +FL M P T G+ E
Sbjct: 164 MPKRDIVAWNAMISGFSLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALRE 223
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + + G F D V T +L +Y + C+ VF+ +K+ VTW++++ +
Sbjct: 224 GKAVHGYCTRMG-FSNDLVVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYV 282
Query: 118 KHGFVEDCMFLFCE-LVRSEVALTESSFVGVI-HGLSNEQDLEFGEQIHGLVIKNGFDYE 175
++ +++ +F + LV +++A+ +G+I G + DL G +H IK GF +
Sbjct: 283 ENEMIKEAGEVFLQMLVNADMAMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILD 342
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L V N++++ Y + + A + F ++ ++D+VS+N++I E+ ++ L+ +M
Sbjct: 343 LTVGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKS 402
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ P+ TT + ++ +C+ L G S H + N + + +AL+D Y KC L
Sbjct: 403 SGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYV 462
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLA 354
A F + ++IVSWN ++ G+ L +Q G P+E T
Sbjct: 463 AKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVT---------- 512
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN------IPRAVVPA 408
L +++++ + SGL+ + +++ IPR +
Sbjct: 513 ---------------------LLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPR-LDHY 550
Query: 409 NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
N + + R G +E ++++ PDI +++AC
Sbjct: 551 NCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSAC 589
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 190/427 (44%), Gaps = 55/427 (12%)
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNAL---ECDVFVGSALVDFYAKCDNLEGAHLCFS 301
F+ ++ SC +N ILG+ IH ++K +L V V L YA C+ +E A F
Sbjct: 2 FLRLLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVN--LTRLYASCNEVELARHVFD 59
Query: 302 EISNKNI--VSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
EI + I ++W+ +I Y S + ++ L ++L G RP +FT+ VL++ + +
Sbjct: 60 EIPHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAI 119
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
+ G L+ S+ K + + TAL Y +
Sbjct: 120 ED----------------GKLIHSHVKCSNFAADMYVCTAL------------VDFYAKC 151
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR-IYPDNYTFVSL 477
G+ + +K+ ++ + DIV+WN +I+ + + +V+ LF MR + + P+ T V +
Sbjct: 152 GELDMAIKVFDEMPKRDIVAWNAMISGFSLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGM 211
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
A + L G ++HG + S+D V ++D+Y K I + ++F+ +N
Sbjct: 212 FPALGRAGALREGKAVHGYCTRMGF-SNDLVVKTGILDVYAKSKCIIYARRVFDSDFKKN 270
Query: 538 VITWTALISALGLNGFAQRALEKFREM----EFLGFKPDRVALIAVLTACRHGGLVREGM 593
+TW+A+I N + A E F +M + P VA+ +L C G + G
Sbjct: 271 EVTWSAMIGGYVENEMIKEAGEVFLQMLVNADMAMVTP--VAIGLILMGCARFGDLSGG- 327
Query: 594 ELFERMNRSYGVEP----EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
R Y ++ ++ + V+ +YG L +A + T + + + + + +
Sbjct: 328 ----RCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGL-KDIVSYNSLIS 382
Query: 650 GC-QRCR 655
GC + CR
Sbjct: 383 GCVENCR 389
>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
Length = 609
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/555 (29%), Positives = 272/555 (49%), Gaps = 40/555 (7%)
Query: 105 SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIH 164
++ WNS ++ G+ + LF ++ ++ + +F V S +L++ + +H
Sbjct: 18 TVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVH 77
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
V+K+ F +L V S+V+MY +C+ + A +F + RDV SWN++I A+
Sbjct: 78 THVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVD 137
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
+ + L+ M ++ + + T + + +S L++ + +SIH+ IK ++ DV V + +
Sbjct: 138 RVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWI 197
Query: 285 DFYAKCDNLEGAHLCFSEISN--KNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPN 341
YAKC A F I K VSWN++I GYA + ++ ++L G+R +
Sbjct: 198 AAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRAD 257
Query: 342 EFTFSHV----LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
T + ++ + F +H I++G ++ V+ +L++ Y+K G I A
Sbjct: 258 LSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSA----- 312
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
+Y L + VSW +IA A GD E +
Sbjct: 313 ----------------------RY-----LFDNMLGKTRVSWTAMIAGXAEKGDLDEAMT 345
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
LF M A PD T +SL+S C + L LG + + + VCN LID+Y
Sbjct: 346 LFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANG-LKDNLMVCNALIDVY 404
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
KCGS+ ++ ++F M ++++++WT LI+ LNG + AL F +M LG KP+ + +
Sbjct: 405 AKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFL 464
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
AVL AC H G + +G E F M + Y + P +DHY C+ DLL R G LKEA + I MPF
Sbjct: 465 AVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPF 524
Query: 638 PPNALIWRTFLEGCQ 652
P+ IW L C+
Sbjct: 525 KPDVGIWSVLLSACK 539
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 147/550 (26%), Positives = 255/550 (46%), Gaps = 37/550 (6%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQA 63
V +NS I+ GY AL +F M G EP TF + +C L ++ +Q+
Sbjct: 18 TVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVH 77
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+ + F AD FV T+++ +Y + L ++F MP + + +WNS++ F + GFV+
Sbjct: 78 THVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVD 137
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ LFCE+ + + +G+ H + +DL+ E IH IK G D ++ V+N+ +
Sbjct: 138 RVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWI 197
Query: 184 NMYFQCAGIWSAEKMFKDVE--IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
Y +C AE +F ++ ++ VSWN++I A E KA+ + +M +
Sbjct: 198 AAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRAD 257
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+T + +++SC + GK IHA I+ + D+ V + L+ Y+KC ++ A F
Sbjct: 258 LSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFD 317
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQL 360
+ K VSW A+I G A K L ++ +G +P+ T ++ L+
Sbjct: 318 NMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALE- 376
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
LG + +YA + + D L AL +Y + G
Sbjct: 377 ---------------LGKWIDTYATANGLKDNLMVCNAL------------IDVYAKCGS 409
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+ +L + +VSW +IA CA NG++KE L LF M + P++ TF+++L A
Sbjct: 410 MDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQA 469
Query: 481 CSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-N 537
C+ L G L+ K I+ D + C + D+ G+ G + + + M + +
Sbjct: 470 CNHAGFLEKGWECFNLMTKVYKINPGLDHYSC--MADLLGRKGRLKEAFEFIQNMPFKPD 527
Query: 538 VITWTALISA 547
V W+ L+SA
Sbjct: 528 VGIWSVLLSA 537
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 211/454 (46%), Gaps = 38/454 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGL----LSCDSLNPV 56
MP R+V S+NS+I +++ G+V+ + +F M G T GL LS L +
Sbjct: 115 MPXRDVASWNSMIXGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKML 174
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR--KSLVTWNSIVS 114
E + + +K G+ D V + Y + G +VF+ + + K+ V+WNS+++
Sbjct: 175 E--SIHSFGIKIGID-TDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIA 231
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + F +++ S+ + ++ + L G+ IH I+ G D
Sbjct: 232 GYAHFEQCSKAVGFFKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDS 291
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ V N+L++MY +C I SA +F ++ + VSW +I AE + +A+ L+ M
Sbjct: 292 DIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAME 351
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
P+ T + +++ C LGK I N L+ ++ V +AL+D YAKC +++
Sbjct: 352 AVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMD 411
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F + K++VSW LI G A ++ L ++++LG +PN TF VL++
Sbjct: 412 NARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQAC- 470
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
H + G+E + +LMT K I + + +A
Sbjct: 471 ------NHAGFLEKGWECF-----NLMTKVYK---------------INPGLDHYSCMAD 504
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
+ R G+ E + + + +PD+ W+++++AC
Sbjct: 505 LLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSAC 538
>gi|115467784|ref|NP_001057491.1| Os06g0314100 [Oryza sativa Japonica Group]
gi|54291635|dbj|BAD62428.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113595531|dbj|BAF19405.1| Os06g0314100 [Oryza sativa Japonica Group]
gi|125597005|gb|EAZ36785.1| hypothetical protein OsJ_21122 [Oryza sativa Japonica Group]
Length = 992
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 187/653 (28%), Positives = 312/653 (47%), Gaps = 40/653 (6%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEGAQLQ 62
N+VS NS+IS + G E A +F M +G P T +L C S G +
Sbjct: 308 NLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVH 367
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
V+K GL V +AL+ +Y + G LD V +F + KS + WNS++S + +
Sbjct: 368 GMVIKFGL-AEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKW 426
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
M + V + + VI + +DL G+ IH +++ + V N+L
Sbjct: 427 NMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNAL 486
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
+ MY C + K+F +E+R ++SWNTII AE+ + L + +M + + +
Sbjct: 487 LAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDL 546
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T + +I+S + +++ +G+S+H+ I++ DV V +AL+ Y C ++ F
Sbjct: 547 VTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDS 606
Query: 303 ISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLR-SSLAFQLLQL 360
+S+ N +S+NAL+ GY + I L +++ +PN T ++L Q +
Sbjct: 607 LSSVNTISYNALMTGYRKNNLFEEILPLFYHMIKNDQKPNIITLLNLLPICHSQLQGKTV 666
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H IR N+ + SL TS A+ +Y+R
Sbjct: 667 HSYAIR----NFSKLETSLFTS---------------------AIC-------MYSRFNN 694
Query: 421 YNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
L + ER +IV WN +++AC + F+ ++ + D T ++L+S
Sbjct: 695 LEYCHNLFCLVGERNNIV-WNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALIS 753
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
ACS+L L + I + V N LIDM+ +CGSI + KIF+ +++ +
Sbjct: 754 ACSQLGKADLAECVTA-IALQKGFDGTIIVLNALIDMHSRCGSISFARKIFDISMEKDSV 812
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W+ +I+A ++G AL+ F M G KPD + ++VL+AC G + +G LF M
Sbjct: 813 SWSTMINAYSMHGDGGSALDLFLMMVSSGIKPDDITFVSVLSACSRSGFLEQGRTLFRSM 872
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+G+ P M+HY C+VDLL R GHL EA I+TTMPF P+ + + L C+
Sbjct: 873 LADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACR 925
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 159/659 (24%), Positives = 297/659 (45%), Gaps = 48/659 (7%)
Query: 6 VVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQA 63
V N + +S G+ + L ++ + F FTF ++ +C +++ + G ++
Sbjct: 109 VYDLNIAVRCFSDHGFHRELLGLYREVC--AFGSDNFTFPPVIRACAAVSCLRLGKEVHC 166
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
V++ G + V TALL +Y + G +D VF+ M + L++WN+++S + +G +
Sbjct: 167 RVVRTG-HGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLL 225
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ ++ + SS VG++ +S + G+ +H +K+G + + + +
Sbjct: 226 EAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESLTPAFI 285
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
+MY + S+ +F + ++VS N++I + + KA ++ M + PN
Sbjct: 286 SMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLV 345
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
T V ++ C+ G+S+H VIK L V V SALV Y+K +L+ A FS +
Sbjct: 346 TVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSV 405
Query: 304 SNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ--- 359
+ K+ + WN+LI GY + + + +Q+ G P+ T V+ + L
Sbjct: 406 TEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGK 465
Query: 360 -LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
+H +R E E V+ +L+ YA
Sbjct: 466 SIHAYAVRSRLELNESVMNALLAMYAD--------------------------------C 493
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
GQ + KL +E ++SWN +I+ A NGD L F MR A + D T ++L+
Sbjct: 494 GQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALI 553
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
S+ S + ++ +G S+H L ++ + D V N LI MY CG I + K+F+ ++ N
Sbjct: 554 SSLSAIEDITVGESVHSLAIRSG-CNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNT 612
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
I++ AL++ N + L F M KP+ + L+ +L C H L +G +
Sbjct: 613 ISYNALMTGYRKNNLFEEILPLFYHMIKNDQKPNIITLLNLLPIC-HSQL--QGKTVHSY 669
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIA 657
R++ + E + + + R+ +L+ + + N ++W L C +C+ A
Sbjct: 670 AIRNFS-KLETSLFTSAICMYSRFNNLEYCHNLFCLVG-ERNNIVWNAILSACVQCKQA 726
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 165/654 (25%), Positives = 293/654 (44%), Gaps = 40/654 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--G 58
M R+++S+N++IS YS G + +A M GF P + G++S S V G
Sbjct: 203 MKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAG 262
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L A LK+G+ D + A + +Y G L +S+F +LV+ NS++S+ +
Sbjct: 263 DPLHAFALKSGVL-GDESLTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQ 321
Query: 119 HGFVEDCMFLFCELVRSEVALTE-SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
HG E +F L+R + + + V ++ SN + GE +HG+VIK G ++
Sbjct: 322 HGAWEKAFGVF-RLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVS 380
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V ++LV+MY + + SA +F V + + WN++I + + + RM ++
Sbjct: 381 VVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEG 440
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ T + VI+ C ++ +GKSIHA +++ LE + V +AL+ YA C L
Sbjct: 441 VDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICC 500
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + + ++SWN +I G+A + F + + + F L
Sbjct: 501 KLFHTMEVRTLISWNTIISGFAENGDSVACLRF--------------FCQMRLADMQFDL 546
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+ L LI + V S+ + +SG D V AN + +Y
Sbjct: 547 VTLIALISSLSAIEDITVGESVHSLAIRSGCNLD-------------VSVANALITMYTN 593
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G KL L + +S+N ++ N ++E+L LF +M P+ T ++L
Sbjct: 594 CGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEEILPLFYHMIKNDQKPNIITLLNL 653
Query: 478 LSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
L C G ++H I+ + + F I MY + ++ +F + +R
Sbjct: 654 LPICHSQLQ---GKTVHSYAIRNFSKLETSLFTS--AICMYSRFNNLEYCHNLFCLVGER 708
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
N I W A++SA A A + FR+++FL K D V ++A+++AC G + E
Sbjct: 709 NNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKA-DLAECV 767
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ G + + + ++D+ R G + A KI + +++ W T +
Sbjct: 768 TAIALQKGFDGTIIVLNALIDMHSRCGSISFARKIF-DISMEKDSVSWSTMINA 820
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 133/549 (24%), Positives = 253/549 (46%), Gaps = 55/549 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR----GFEPTQFTFGGLLS-CDSLNP 55
+ +++ + +NS+IS Y V + M + + R G +P T ++S C
Sbjct: 405 VTEKSQLLWNSLISGY----LVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTED 460
Query: 56 VE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+ G + A +++ L ++ V ALL +Y G L +F M ++L++WN+I+S
Sbjct: 461 LHVGKSIHAYAVRSRLELNES-VMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIIS 519
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
F ++G C+ FC++ +++ + + +I LS +D+ GE +H L I++G +
Sbjct: 520 GFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNL 579
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ VAN+L+ MY C I + EK+F + + +S+N ++ ++ F + L L+ M
Sbjct: 580 DVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEEILPLFYHMI 639
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ PN T + ++ C + + GK++H+ I+N + + + ++ + Y++ +NLE
Sbjct: 640 KNDQKPNIITLLNLLPIC---HSQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLE 696
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
H F + +N + WNA++ ++ Q G + F
Sbjct: 697 YCHNLFCLVGERNNIVWNAILSA------------CVQCKQAGVAFDYFR---------Q 735
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q L + + M L S + K+ L A ++ N + +
Sbjct: 736 IQFLNVKTDAVTM------LALISACSQLGKADLAECVTAIALQKGFDGTIIVLNALIDM 789
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
++R G + K+ D VSW+ +I A + +GD L+LF M ++ I PD+ TF
Sbjct: 790 HSRCGSISFARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSSGIKPDDITF 849
Query: 475 VSLLSACSKLCNLALGSSL-------HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
VS+LSACS+ L G +L HG+ + E + C ++D+ G+ G + +
Sbjct: 850 VSVLSACSRSGFLEQGRTLFRSMLADHGITPRME-----HYAC--MVDLLGRTGHLDEAY 902
Query: 528 KIFNEMTDR 536
I M R
Sbjct: 903 DIVTTMPFR 911
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/527 (23%), Positives = 231/527 (43%), Gaps = 34/527 (6%)
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM--PRKSLVTWNSIVSIF 116
++L A + G DA V + Y G +VF R + N V F
Sbjct: 60 SKLHARLAVTGALREDASVVAGAVERYLFFGKPASAAAVFAGFYRGRAEVYDLNIAVRCF 119
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
HGF + + L+ E+ +F VI + L G+++H V++ G +
Sbjct: 120 SDHGFHRELLGLYREVC--AFGSDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNV 177
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V +L++MY + + + ++F ++ RD++SWN +I + + +A E +M D
Sbjct: 178 GVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQD 237
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
PN ++ V +++ +GL G +HA +K+ + D + A + YA +L +
Sbjct: 238 GFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSS 297
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF 355
F + N+VS N++I + F + L++ G PN T +L F
Sbjct: 298 LSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNF 357
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
G + E V G ++ K GL ++ ++ V+AL +Y
Sbjct: 358 -----------FGINHGESVHGMVI----KFGL-AEQVSVVSAL------------VSMY 389
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
++ G + V L S + + WN +I+ N + V+ + M+ + PD T +
Sbjct: 390 SKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVI 449
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S++S C +L +G S+H ++ + +++ V N L+ MY CG + K+F+ M
Sbjct: 450 SVISKCRHTEDLHVGKSIHAYAVRSRLELNES-VMNALLAMYADCGQLSICCKLFHTMEV 508
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
R +I+W +IS NG + L F +M + D V LIA++++
Sbjct: 509 RTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISS 555
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 4/196 (2%)
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
R ++ NI + + +G ++E+L L++ + A DN+TF ++ AC+ + L LG
Sbjct: 106 RAEVYDLNIAVRCFSDHGFHRELLGLYREVCA--FGSDNFTFPPVIRACAAVSCLRLGKE 163
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+H + +T + V L+DMY K G + S ++F+ M R++I+W A+IS LNG
Sbjct: 164 VHCRVVRTGH-GGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNG 222
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY 612
A E ++M+ GF+P+ +L+ +++ G VR+ + GV +
Sbjct: 223 CLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLG-VRDAGDPLHAFALKSGVLGDESLT 281
Query: 613 HCVVDLLVRYGHLKEA 628
+ + +GHL +
Sbjct: 282 PAFISMYAAFGHLSSS 297
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGAQ 60
+++ VS++++I+AYS G AL +FL M++ G +P TF +LS S + +G
Sbjct: 808 EKDSVSWSTMINAYSMHGDGGSALDLFLMMVSSGIKPDDITFVSVLSACSRSGFLEQGRT 867
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKH 119
L S+L + ++ L GR G LDE + MP R S S++ H
Sbjct: 868 LFRSMLADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACRFH 927
Query: 120 G 120
G
Sbjct: 928 G 928
>gi|359489798|ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 804
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 253/513 (49%), Gaps = 38/513 (7%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY--FQCAGIWSAEKMFK 200
S + I GL E + I G VIK GF+ E+ VA +L+ Y + +W K+F
Sbjct: 15 SVIRAISGLGLEDMMRV---ICGSVIKLGFESEVSVATALIGFYSDYDMGIVW---KIFN 68
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
I+D+V W+ ++ A +S +G+A E++ M D V PN + V ++ +CA + +
Sbjct: 69 QTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLF 128
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
GK IH IK V ++LVD YAKC N + + L F +I K+++SW +I G
Sbjct: 129 GKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIE 188
Query: 321 KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM 380
P F +Q F + L ++Q E+ G
Sbjct: 189 NDCPREAFKAFSRMQFSC----FGADETIVQDLIVAIIQAD-----------EHKFGIAF 233
Query: 381 TSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+ K+GL LAFV+ + +Y + G+ + + QL + D +SW
Sbjct: 234 HGFLLKNGL----LAFVSI---------GTALLQMYAKFGELESAIIVFDQLNKKDYISW 280
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+ +I+ AH+ LE FK M++ P+ TFVSLL ACS + LG S+ K
Sbjct: 281 SAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATK 340
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+S + F+ + LID+Y K G I IFNE+ ++++ W+++I+ GLNG ALE
Sbjct: 341 AGYLS-NAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALE 399
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
F M G KP+ V I+VL+AC H GL EG F M + YG+ P++ HY C+VDL+
Sbjct: 400 TFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLI 459
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G+++ A + + MP P+ IW L GC+
Sbjct: 460 SRRGNIEGALQFVNKMPMEPDKRIWGALLAGCR 492
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 236/493 (47%), Gaps = 44/493 (8%)
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
SV+K G F ++ V TAL+G Y + + V +F P K LV W+++VS K G
Sbjct: 34 GSVIKLG-FESEVSVATALIGFYSDYD-MGIVWKIFNQTPIKDLVLWSAMVSACVKSGQY 91
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ +F + V S V ++ +N L FG++IHG IK F V NSL
Sbjct: 92 GEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSL 151
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
V+MY +C ++ +F + +D++SW TII E++ +A + + RM ++
Sbjct: 152 VDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADE 211
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T +I + G + H ++KN L V +G+AL+ YAK LE A + F +
Sbjct: 212 TIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQ 271
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQLH 361
++ K+ +SW+A+I +A P + + +Q RPNE TF +L++
Sbjct: 272 LNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQA---------- 321
Query: 362 CLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
C +I G + LG + ++A K+G +S+A ++ + +Y + G+
Sbjct: 322 CSLI--GAQE----LGESIQAHATKAGYLSNAFL-------------SSALIDLYCKFGR 362
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
N+ + +++ D+V W+ +I NG E LE F M A + P+ F+S+LSA
Sbjct: 363 INQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSA 422
Query: 481 CSKLCNLALG--SSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIFNEM---T 534
CS C L S + +K II + C ++D+ + G+I +++ N+M
Sbjct: 423 CSH-CGLEHEGWSCFSSMEQKYGIIPKLPHYAC--MVDLISRRGNIEGALQFVNKMPMEP 479
Query: 535 DRNVITWTALISA 547
D+ + W AL++
Sbjct: 480 DKRI--WGALLAG 490
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 215/482 (44%), Gaps = 33/482 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GA 59
P +++V +++++SA + G +A +F M G EP + +L +C ++ + G
Sbjct: 71 PIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGK 130
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ +K +F V +L+ +Y + + VF+ + K L++W +I+ ++
Sbjct: 131 EIHGFSIKK-MFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIEN 189
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ F + S E+ +I + + +FG HG ++KNG + +
Sbjct: 190 DCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIG 249
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+L+ MY + + SA +F + +D +SW+ +I A S + ALE + +M
Sbjct: 250 TALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDER 309
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN+ TFV ++ +C+ + LG+SI A K + F+ SAL+D Y K +
Sbjct: 310 PNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAI 369
Query: 300 FSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F+EI K++V W+++I GY + ++ +L G +PNE F VL +
Sbjct: 370 FNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSAC------ 423
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
HC G E+ + S M K G+I +P ++I+ R
Sbjct: 424 -SHC-----GLEHEGWSCFSSMEQ--KYGIIP---------KLPHYACMVDLIS----RR 462
Query: 419 GQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G ++ ++++ PD W ++A C E+ EL R + P N ++ +
Sbjct: 463 GNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVA-ERLIGLDPQNTSYYVI 521
Query: 478 LS 479
LS
Sbjct: 522 LS 523
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 172/416 (41%), Gaps = 41/416 (9%)
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN T + VI + +GL + + I VIK E +V V +AL+ FY+ D +
Sbjct: 8 PNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDYD-MGIVWKI 66
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL 358
F++ K++V W+A++ F + +Q G PN + +L + L
Sbjct: 67 FNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGAL 126
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
++H I+ + V SL+ YAK
Sbjct: 127 LFGKEIHGFSIKKMFHPLTNVHNSLVDMYAK----------------------------- 157
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+ ++ + Q+ D++SW +I C N +E + F M+ + D
Sbjct: 158 ---CRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIV 214
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
L+ A + G + HG + K +++ + + L+ MY K G + S++ +F+++
Sbjct: 215 QDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVS-IGTALLQMYAKFGELESAIIVFDQLN 273
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
++ I+W+A+IS + ALE F++M+ +P+ + +++L AC G G
Sbjct: 274 KKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGES 333
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ ++ G ++DL ++G + + I +P + + W + + G
Sbjct: 334 IQAHATKA-GYLSNAFLSSALIDLYCKFGRINQGRAIFNEIP-TKDLVCWSSMING 387
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/581 (29%), Positives = 274/581 (47%), Gaps = 39/581 (6%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
+G A+L + R G VF MP + + +WN +V +GK G +E+ + L+ ++ +
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG 190
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
V +F V+ D G ++H V++ GF E+ V N+L+ MY +C + +A
Sbjct: 191 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAAR 250
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
K+F + + D +SWN +I E+ LEL+L M D V PN T V + L
Sbjct: 251 KVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLS 310
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ K +H +K DV ++L+ YA + A FS + ++ +SW A+I
Sbjct: 311 DITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMIS 370
Query: 317 GYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYEN 371
GY P + L+++ P++ T + L + L +LH L G+ +
Sbjct: 371 GYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMS 430
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
Y V +L+ YAKS I A +++ +
Sbjct: 431 YVVVTNALLEMYAKSKRIDKA--------------------------------IEVFKCM 458
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
D+VSW+ +IA N E L F++M A + P++ TF++ L+AC+ L G
Sbjct: 459 PEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFIAALAACAATGALRSGK 517
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H + + I + + ++ N LID+Y KCG G + F ++V++W +I+ +
Sbjct: 518 EIHAHVLRCGI-AYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAH 576
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G + AL F +M +G PD V +A+L AC GG+V EG ELF M Y + P + H
Sbjct: 577 GNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKH 636
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y C+VDLL R G L EA I MP P+A +W L GC+
Sbjct: 637 YACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCR 677
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 149/558 (26%), Positives = 254/558 (45%), Gaps = 48/558 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+R+V S+N ++ Y + G +E+AL ++ M+ G P +TF +L SC + G
Sbjct: 155 MPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMG 214
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ A VL+ G F + V AL+ +Y + G + VF+ M ++WN++++ +
Sbjct: 215 REVHAHVLRFG-FAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFE 273
Query: 119 HGFVEDCMFLFCELVRSEVA--LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+G + LF +++ EV L + V V GL + D+ F +++HGL +K GF ++
Sbjct: 274 NGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLS--DITFAKEMHGLAVKRGFATDV 331
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
NSL+ MY + A +F ++ RD +SW +I ++ KALE+Y M V+
Sbjct: 332 AFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVN 391
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+ T + +CA L + +G +H V V +AL++ YAK ++ A
Sbjct: 392 NVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKA 451
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + K++VSW+++I G+ + +PN TF L + A
Sbjct: 452 IEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVKPNSVTFIAALAACAATG 511
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L ++H ++R G Y+ +L+ Y K G A A A
Sbjct: 512 ALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGA----------- 560
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
D+VSWNI+IA +G+ + L F M PD
Sbjct: 561 ---------------------KDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEV 599
Query: 473 TFVSLLSACSKLCNLALGSSL-HGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIF 530
TFV+LL ACS+ ++ G L H + K I+ + + C ++D+ + G + +
Sbjct: 600 TFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYAC--MVDLLSRVGQLTEAYNFI 657
Query: 531 NEMT-DRNVITWTALISA 547
NEM + W AL++
Sbjct: 658 NEMPITPDAAVWGALLNG 675
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 222/457 (48%), Gaps = 42/457 (9%)
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ L + N++++M + W A ++F + RDV SWN ++G ++ +AL+LY RM
Sbjct: 127 FGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRM 186
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
V P+ TF V+ SC G+ + +G+ +HA V++ +V V +AL+ YAKC ++
Sbjct: 187 MWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDV 246
Query: 294 EGAHLCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHV---- 348
A F ++ + +SWNA+I G + + + L + +LQ +PN T + V
Sbjct: 247 VAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVAS 306
Query: 349 -LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
L S + F ++H L ++ G+ SL+ YA G++ A
Sbjct: 307 GLLSDITFA-KEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQA--------------- 350
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
RT + S+++ D +SW +I+ NG + LE++ M +
Sbjct: 351 ---------RT--------VFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNV 393
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD+ T S L+AC+ L +L +G LH L + +S V N L++MY K I ++
Sbjct: 394 SPDDITIASALAACACLGSLDVGVKLHELAESKGFMSY-VVVTNALLEMYAKSKRIDKAI 452
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
++F M +++V++W+++I+ N AL FR M KP+ V IA L AC G
Sbjct: 453 EVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFIAALAACAATG 511
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
+R G E+ + R G+ E + ++DL V+ G
Sbjct: 512 ALRSGKEIHAHVLRC-GIAYEGYLPNALIDLYVKCGQ 547
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 203/450 (45%), Gaps = 41/450 (9%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEGAQLQ 62
+ +S+N++I+ + G L +FL M+ +P T + L + ++
Sbjct: 260 DCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMH 319
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+K G F D +L+ +Y G + + +VF M + ++W +++S + K+GF
Sbjct: 320 GLAVKRG-FATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFP 378
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ + ++ + + V+ + + + + L+ G ++H L GF ++V N+L
Sbjct: 379 DKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNAL 438
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
+ MY + I A ++FK + +DVVSW+++I + +AL + M D V PN
Sbjct: 439 LEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNS 497
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
TF+ + +CA GK IHA V++ + + ++ +AL+D Y KC A F
Sbjct: 498 VTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCA 557
Query: 303 ISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
K++VSWN +I G+ A + T++ +++++G P+E TF
Sbjct: 558 HGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFV--------------- 602
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNR 417
+L+ + ++ G++S+ ++ ++VP + + +R
Sbjct: 603 ----------------ALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSR 646
Query: 418 TGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
GQ E ++++ PD W ++ C
Sbjct: 647 VGQLTEAYNFINEMPITPDAAVWGALLNGC 676
>gi|255559012|ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540371|gb|EEF41942.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/502 (31%), Positives = 257/502 (51%), Gaps = 53/502 (10%)
Query: 158 EFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL 217
+ G Q+H +I+ GF + + +++V+MY +C+ I SA ++F ++ R+ V+WN++I
Sbjct: 86 DLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVFNEMPERNDVTWNSLI--- 142
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVY--VINSCAGLQNSILGKSIHAKVIKNALEC 275
FG YL + T+F + C+ L+ G +H +K +
Sbjct: 143 -----FG-----YLNVMPTCAMRGVTSFSVSTCLVVCSQLEVRNFGAQVHGLSLKLGFDN 192
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELL 334
+VFVG+AL+D Y+KCD ++ + F + +KN+V+W A++ YA P +L+ E++
Sbjct: 193 NVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYAQNEQPDEAMILVREMM 252
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
+LG + N T++ +L S + +Q +HC IIR G E Y+ +L+T Y+K
Sbjct: 253 RLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLYIAATLVTVYSKC---- 308
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
T + K+ S ++ D +SWN VIA ++ G
Sbjct: 309 ---------------------------TNNLEDFNKISSGVQLSDQISWNAVIAGYSNLG 341
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
++ L+ F MR A I D YTF SLL A + G +H LI KT SS +V
Sbjct: 342 LGEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASS-VYVQ 400
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
N L+ MY +CG+I S ++F M D +V++W AL++ +GF A+E F +M K
Sbjct: 401 NGLVSMYARCGAIDDSKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIK 460
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP-EMDHYHCVVDLLVRYGHLKEAE 629
P+ +AVL+AC H G V +G+E F+ M +EP ++HY VVD+ R G+L EAE
Sbjct: 461 PNSTTFLAVLSACSHVGSVDKGLEYFDFMRSDISLEPLRVEHYASVVDIFGRAGYLSEAE 520
Query: 630 KIITTMPFPPNALIWRTFLEGC 651
II MP P +++ L C
Sbjct: 521 AIINCMPMDPGPSVYKALLSAC 542
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 141/534 (26%), Positives = 269/534 (50%), Gaps = 58/534 (10%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G QL +++++ G F ++ + +A++ +Y + + VF +MP ++ VTWNS+ IFG
Sbjct: 88 GIQLHSTIIRMG-FTSNVHICSAVVDMYAKCSEIQSAHEVFNEMPERNDVTWNSL--IFG 144
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ C +R + + S+ + V L FG Q+HGL +K GFD +
Sbjct: 145 YLNVMPTCA------MRGVTSFSVSTCLVVCSQLEVRN---FGAQVHGLSLKLGFDNNVF 195
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V +L++MY +C G+ + ++F + ++VV+W ++ A A++E +A+ L M
Sbjct: 196 VGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYAQNEQPDEAMILVREMMRLG 255
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC-DNLEGA 296
+ N T+ +++S +G + K +H +I+ LEC++++ + LV Y+KC +NLE
Sbjct: 256 IKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLYIAATLVTVYSKCTNNLEDF 315
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
+ S + + +SWNA+I GY++ ++ E+ + + +TF+ +L + AF
Sbjct: 316 NKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIGAF 375
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ ++H LI++ GY + YV L++ YA+ G I D
Sbjct: 376 LAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDD-------------------- 415
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+ ++ +E D+VSWN ++ CAH+G E +ELF+ MR +I P++
Sbjct: 416 ------------SKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNS 463
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKT---EIISSDTFVCNMLIDMYGKCGSIGSSVK 528
TF+++LSACS + ++ G ++ E + + + ++D++G+ G + +
Sbjct: 464 TTFLAVLSACSHVGSVDKGLEYFDFMRSDISLEPLRVEHYAS--VVDIFGRAGYLSEAEA 521
Query: 529 IFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
I N M D + AL+SA ++G + A+ R++ L PD A +L+
Sbjct: 522 IINCMPMDPGPSVYKALLSACLVHGNREIAVRSARKL--LELWPDDPATYILLS 573
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 234/500 (46%), Gaps = 59/500 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGG-LLSCDSLNPVE-G 58
MP+RN V++NS+I Y L + RG T F+ L+ C L G
Sbjct: 130 MPERNDVTWNSLIFGY---------LNVMPTCAMRGV--TSFSVSTCLVVCSQLEVRNFG 178
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
AQ+ LK G F + FVGTAL+ +Y + +D+ VF+ M K++VTW ++V+ + +
Sbjct: 179 AQVHGLSLKLG-FDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYAQ 237
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ ++ M L E++R + ++ ++ S + +++ +Q+H +I+ G + L +
Sbjct: 238 NEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLYI 297
Query: 179 ANSLVNMYFQCA-GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
A +LV +Y +C + K+ V++ D +SWN +I + AL+ + M
Sbjct: 298 AATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHAN 357
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ + TF ++ + G+ +HA ++K V+V + LV YA+C ++ +
Sbjct: 358 IKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSK 417
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTF-------SHV- 348
F + + ++VSWNAL+ G A ++ L ++ + +PN TF SHV
Sbjct: 418 RVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACSHVG 477
Query: 349 -----------LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
+RS ++ + L++ E+Y S++ + ++G +S+A A +
Sbjct: 478 SVDKGLEYFDFMRSDISLEPLRV---------EHY----ASVVDIFGRAGYLSEAEAIIN 524
Query: 398 AL------NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
+ ++ +A++ A ++ G NR KLL +L D ++ ++ A G
Sbjct: 525 CMPMDPGPSVYKALLSACLVHG--NREIAVRSARKLL-ELWPDDPATYILLSNMLATEGY 581
Query: 452 YKEVLELFKYM--RAARIYP 469
+ + ++ K M R R P
Sbjct: 582 WDDAADVRKLMCDRGVRKNP 601
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
+LF ++ + + Y ++S C+K + LG LH I + +S+ +C+ ++DM
Sbjct: 55 DLFAHLLRNGSFSNPYFINKVVSFCAKFASYDLGIQLHSTIIRMG-FTSNVHICSAVVDM 113
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALI 545
Y KC I S+ ++FNEM +RN +TW +LI
Sbjct: 114 YAKCSEIQSAHEVFNEMPERNDVTWNSLI 142
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 253/500 (50%), Gaps = 43/500 (8%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV--EIRDVVSWNTIIGALAE 219
QIH +I + N+L+N+Y +C + +F + ++VVSW ++I L
Sbjct: 48 QIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTR 107
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ KAL + M V+PN TF V+++C S+ G+ +H+ V K+ +VFV
Sbjct: 108 FKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFV 167
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGY 338
SALVD YAKC ++ A F E+ +N+VSWN +I+G+ +K +IF LL
Sbjct: 168 VSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENL 227
Query: 339 RP-NEFTFSHVLRS-----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
+E +FS V + +L F Q+H + +++G N Y+ SL Y K GL
Sbjct: 228 TALDEVSFSSVFSACANAGNLEFG-KQVHGVALKLGVWNLVYINNSLSDMYGKCGL---- 282
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+N+ KL S D+V+WNI+I A +N +Y
Sbjct: 283 ----------------------------FNDVAKLFSNTGARDVVTWNIMIMAYVYNHNY 314
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
++ F MR PD ++ S+L +C+ L L G+ +H I ++ + + V +
Sbjct: 315 EDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFV-KNLRVASS 373
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
LI MY KCGS+ + +IF E DRNV+ WTA+I+A +G A +E F +M G KPD
Sbjct: 374 LITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPD 433
Query: 573 RVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII 632
+ ++VL+AC H G V EG F M + +G+ P +HY C+VDLL R G L A++ I
Sbjct: 434 YITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFI 493
Query: 633 TTMPFPPNALIWRTFLEGCQ 652
MP P+A +W L C+
Sbjct: 494 ELMPIKPDASVWGALLSACR 513
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 226/438 (51%), Gaps = 29/438 (6%)
Query: 2 PD--RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVE 57
PD +NVVS+ S+I+ +R AL F +M G P +TF +LS D+ V
Sbjct: 89 PDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVH 148
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS--VFEDMPRKSLVTWNSIVSI 115
G Q+ + V K+G F A+ FV +AL+ +Y + C D +++ VFE+MP ++LV+WN+++
Sbjct: 149 GEQMHSLVWKHG-FLAEVFVVSALVDMYAK--CCDMLMAEKVFEEMPVRNLVSWNTMIVG 205
Query: 116 FGKHGFVEDCMFLFCELVRSEV-ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
F ++ + +F F L+ + AL E SF V +N +LEFG+Q+HG+ +K G
Sbjct: 206 FLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWN 265
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ + NSL +MY +C K+F + RDVV+WN +I A + N+ A + M
Sbjct: 266 LVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMR 325
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
P++ ++ V++SCA L G IH ++I++ ++ V S+L+ YAKC +L
Sbjct: 326 RKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLV 385
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTF-------S 346
A F E ++N+V W A+I + L E +L+ G +P+ TF S
Sbjct: 386 DAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACS 445
Query: 347 HVLRSSLAF----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI- 401
H R F ++++H I G+E+Y ++ L +++G + A F+ + I
Sbjct: 446 HTGRVEEGFFYFNSMIKVHG--IYPGHEHYACIVDLL----SRAGELDRAKRFIELMPIK 499
Query: 402 PRAVVPANIIAGIYNRTG 419
P A V +++ N +
Sbjct: 500 PDASVWGALLSACRNHSN 517
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 156/604 (25%), Positives = 277/604 (45%), Gaps = 84/604 (13%)
Query: 43 TFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP 102
+ LL+C S Q+ + ++ L F+ LL LY + G +D+ + +F P
Sbjct: 32 SLNSLLNC-SRTSKHATQIHSQLITTALLSL-PFLFNNLLNLYAKCGSVDQTLLLFSSAP 89
Query: 103 --RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
K++V+W S+++ + + F + RS V +F V+ ++ G
Sbjct: 90 DDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHG 149
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
EQ+H LV K+GF E+ V ++LV+MY +C + AEK+F+++ +R++VSWNT+I ++
Sbjct: 150 EQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQN 209
Query: 221 ENFGKALELYLRMSVD-IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ + +A+ + + ++ + ++ +F V ++CA N GK +H +K + V++
Sbjct: 210 KLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYI 269
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA---SKSSPTSIFLLIELLQL 336
++L D Y KC FS +++V+WN +I+ Y + + F ++ +
Sbjct: 270 NNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMR--RK 327
Query: 337 GYRPNEFTFSHVLRS----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
G P+E ++S VL S + +Q +H IIR G+ V SL+T YAK G + DA
Sbjct: 328 GSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDA 387
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
++ + E ++V W +IAAC +G
Sbjct: 388 F--------------------------------QIFEETEDRNVVCWTAIIAACQQHGHA 415
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
V+ELF+ M I PD TFVS+LSACS + G F N
Sbjct: 416 NWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEG----------------FFYFNS 459
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
+I ++G I+ + ++ L G RA R +E + KPD
Sbjct: 460 MIKVHG----------IYPGHEH-----YACIVDLLSRAGELDRAK---RFIELMPIKPD 501
Query: 573 RVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD-HYHCVVDLLVRYGHLKEAEKI 631
A+L+ACR+ + G E+ ++ + +EP+ +Y + ++L R G L EA+++
Sbjct: 502 ASVWGALLSACRNHSNLIMGKEVALKL---FDLEPDNPGNYVLLCNILTRNGMLNEADEV 558
Query: 632 ITTM 635
M
Sbjct: 559 RRKM 562
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 186/425 (43%), Gaps = 47/425 (11%)
Query: 241 NQTTFVYVINSCAGLQN----SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+QT F++ + S L N S IH+++I AL F+ + L++ YAKC +++
Sbjct: 22 HQTPFLHPLTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQT 81
Query: 297 HLCFSEISN--KNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLR--- 350
L FS + KN+VSW +LI P ++ + + G PN +TFS VL
Sbjct: 82 LLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACT 141
Query: 351 -SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
++ + Q+H L+ + G+ +V+ +L+ YAK D L
Sbjct: 142 DTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAK---CCDMLM--------------- 183
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
K+ ++ ++VSWN +I N Y + + FK + +
Sbjct: 184 --------------AEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTA 229
Query: 470 -DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
D +F S+ SAC+ NL G +HG+ K + + ++ N L DMYGKCG K
Sbjct: 230 LDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNL-VYINNSLSDMYGKCGLFNDVAK 288
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F+ R+V+TW +I A N + A F M G PD + +VL +C +
Sbjct: 289 LFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAA 348
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ +G + ++ RS G + ++ + + G L +A +I N + W +
Sbjct: 349 LYQGTLIHNQIIRS-GFVKNLRVASSLITMYAKCGSLVDAFQIFEETE-DRNVVCWTAII 406
Query: 649 EGCQR 653
CQ+
Sbjct: 407 AACQQ 411
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 134/256 (52%), Gaps = 4/256 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEP-TQFTFGGLLS-CDSLNPVE- 57
MP RN+VS+N++I + + + A+ F ++ + +F + S C + +E
Sbjct: 191 MPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEF 250
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ LK G++ ++ +L +YG+ G ++V +F + + +VTWN ++ +
Sbjct: 251 GKQVHGVALKLGVWNL-VYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYV 309
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ ED F + R E+S+ V+H +N L G IH +I++GF L
Sbjct: 310 YNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLR 369
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
VA+SL+ MY +C + A ++F++ E R+VV W II A + + +EL+ +M +
Sbjct: 370 VASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREG 429
Query: 238 VFPNQTTFVYVINSCA 253
+ P+ TFV V+++C+
Sbjct: 430 IKPDYITFVSVLSACS 445
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/559 (29%), Positives = 281/559 (50%), Gaps = 36/559 (6%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNE 154
++F +P+ + +N +V F + + L+ L R + ++ ++ + SN+
Sbjct: 65 ALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSND 124
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+ L +H I +G+ + V ++LV++Y + + + A K+F + RD V WNT+I
Sbjct: 125 KHLML---LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMI 181
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
L ++ F +++L+ M D V + +T V+ + A LQ +G I +K
Sbjct: 182 NGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFG 241
Query: 275 -CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIE 332
CD +V + L+ Y+KC ++ A L F I+ +++++NA+I G+ A+ + S+ L E
Sbjct: 242 FCD-YVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRE 300
Query: 333 LLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
LL G R + T ++ F L L C S+ KSG+I +
Sbjct: 301 LLFSGERVSSSTIVGLIPLHSPFGHLHLAC---------------SIHGFCVKSGIILNP 345
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+ IYN+ + + L + +V+WN +I+ NG
Sbjct: 346 TV-------------STAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGST 392
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
+ + LFK M P+ T ++LSAC++L +L+ G +H LIK +E + + +V
Sbjct: 393 ETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIK-SENLEPNIYVSTA 451
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
L+DMY KCG+I + ++F+ M+++N +TW +I GL+G+ AL+ + EM LG+ P
Sbjct: 452 LVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPS 511
Query: 573 RVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII 632
V ++VL AC H GLV EG E+F M Y +EP ++HY C+VD+L R G L++A + I
Sbjct: 512 AVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFI 571
Query: 633 TTMPFPPNALIWRTFLEGC 651
MP P +W T L C
Sbjct: 572 KKMPVEPGPAVWGTLLGAC 590
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 229/496 (46%), Gaps = 46/496 (9%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
Q H I NG+ ++L L F + A +F V D+ +N ++ + ++
Sbjct: 30 QTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLND 89
Query: 222 NFGKALELY--LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ ++ LY LR + ++ P+ T+ + + +C+ ++ +L +HA I + +VFV
Sbjct: 90 SPSSSISLYTHLRRNTNLS-PDNFTYAFAVAACSNDKHLML---LHAHSIIDGYGSNVFV 145
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGY 338
GSALVD Y K + A F + ++ V WN +I G SI L E++ G
Sbjct: 146 GSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGV 205
Query: 339 RPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
R + T + VL ++ Q L+ + CL +++G+ +YVL L++ Y+K G ++ A
Sbjct: 206 RVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARL 265
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
L ++ RPD++++N +I+ NG +
Sbjct: 266 --------------------------------LFRRINRPDLIAYNAMISGFTANGGTEC 293
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
++LF+ + + + T V L+ S +L L S+HG K+ II + T V
Sbjct: 294 SVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPT-VSTAFT 352
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
+Y K I + +F+E ++ V+ W A+IS NG + A+ F+EM F P+ V
Sbjct: 353 AIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAV 412
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
+ +L+AC G + G + + +S +EP + +VD+ + G++ EA ++ +
Sbjct: 413 TITTILSACAQLGSLSFG-KWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDS 471
Query: 635 MPFPPNALIWRTFLEG 650
M N + W T + G
Sbjct: 472 MS-EKNTVTWNTMIFG 486
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/511 (26%), Positives = 232/511 (45%), Gaps = 37/511 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+R+ V +N++I+ + +D++++F M+ G T +L + L ++ G
Sbjct: 169 MPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVG 228
Query: 59 AQLQASVLKNGL-FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+Q LK G FC +V T L+ LY + G ++ +F + R L+ +N+++S F
Sbjct: 229 MGIQCLALKIGFGFCD--YVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFT 286
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G E + LF EL+ S ++ S+ VG+I S L IHG +K+G
Sbjct: 287 ANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPT 346
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V+ + +Y + I A +F + + VV+WN +I ++ + A+ L+ M
Sbjct: 347 VSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTE 406
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN T ++++CA L + GK +H + LE +++V +ALVD YAKC N+ A
Sbjct: 407 FTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAW 466
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F +S KN V+WN +I GY ++ L E+L LGY P+ TF VL +
Sbjct: 467 QLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYAC---- 522
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
H ++ G E + +++ Y LI V I
Sbjct: 523 ---SHAGLVGEG----EEIFHNMVNKYRIEPLIEHYACMVD----------------ILG 559
Query: 417 RTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
R+GQ + ++ + ++ P W ++ AC + D + R + P + +
Sbjct: 560 RSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTD--IARLASERLFELDPGSVGYY 617
Query: 476 SLLSAC-SKLCNLALGSSLHGLIKKTEIISS 505
LLS S N +S+ ++KK ++ S
Sbjct: 618 VLLSNIYSVERNFPKAASIRQVVKKRKLAKS 648
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 137/578 (23%), Positives = 262/578 (45%), Gaps = 50/578 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI-NRGFEPTQFTFGGLLSCDSLNPVEGA 59
+P ++ FN ++ +S ++ ++ ++ N P FT+ ++ S N
Sbjct: 70 VPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACS-NDKHLM 128
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
L A + +G + ++ FVG+AL+ LY + + VF+ MP + V WN++++ K+
Sbjct: 129 LLHAHSIIDG-YGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKN 187
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+D + LF E+V V + S+ V+ + Q+L+ G I L +K GF + V
Sbjct: 188 CCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVL 247
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
L+++Y +C + +A +F+ + D++++N +I + +++L+ +
Sbjct: 248 TGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGER 307
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
+ +T V +I + + L SIH +K+ + + V +A Y K + ++ A
Sbjct: 308 VSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHL 367
Query: 300 FSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRS-----SL 353
F E K +V+WNA+I GY S+ T+I L E+++ + PN T + +L + SL
Sbjct: 368 FDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSL 427
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+F +H LI E YV +L+ YAK G IS+A
Sbjct: 428 SFGKW-VHHLIKSENLEPNIYVSTALVDMYAKCGNISEAW-------------------- 466
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+L + + V+WN +I +G E L+L+ M P T
Sbjct: 467 ------------QLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVT 514
Query: 474 FVSLLSACSKLCNLALGSSL-HGLIKKTEIIS-SDTFVCNMLIDMYGKCGSIGSSVKIFN 531
F+S+L ACS + G + H ++ K I + + C ++D+ G+ G + +++
Sbjct: 515 FLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYAC--MVDILGRSGQLEKALEFIK 572
Query: 532 EM-TDRNVITWTALISALGLN---GFAQRALEKFREME 565
+M + W L+ A ++ A+ A E+ E++
Sbjct: 573 KMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELD 610
>gi|297827565|ref|XP_002881665.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327504|gb|EFH57924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 836
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 189/685 (27%), Positives = 341/685 (49%), Gaps = 57/685 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP +++V++N+++S ++ G +ALR+F M + + + L+ +++ +E
Sbjct: 161 MPVKDIVTWNTMVSGLAQNGCSSEALRLFRDMHSSFVDIDHVSLYNLIP--AVSKLEKND 218
Query: 61 ----LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
L V+K G A + L+ +Y + L VFE++ K +W ++++ +
Sbjct: 219 VCRCLHGLVIKKGFTSA---FSSGLIDMYCKCADLYAAECVFEEVFSKDESSWGTMMAAY 275
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+G E+ + LF + +V + + + + + +LE G IH ++ G ++
Sbjct: 276 AHNGSFEEVLELFDVMRNYDVRMNKVAAASALQAAAYVGNLEKGIAIHEYTVQQGMMSDI 335
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VA SL+NMY +C + AE++F ++ RDVVSW+ +I + ++ +AL L+ M
Sbjct: 336 SVATSLINMYSKCGELELAEQLFIKIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRT 395
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
PN T V+ CAG+ S LGKSIH IK +E ++ +A++ YAKC
Sbjct: 396 HFKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADVESELETATAVISMYAKCGLFSPT 455
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS-SLA 354
F + K+ +++NAL GY + F + + ++L G P+ T +L++ +L
Sbjct: 456 LKAFERLPIKDAIAFNALAQGYTQIGDASKAFDVYKNMKLHGVCPDSGTMVGMLQTCALC 515
Query: 355 FQLLQLHCL---IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ C+ II+ G+++ +V +L+ + K DALA +L
Sbjct: 516 SDYARGSCVYGQIIKHGFDSECHVAHALIDMFTKC----DALAAAKSL------------ 559
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+++ G TV SWNI++ +G +E + F+ M+ + P+
Sbjct: 560 ---FDKCGFEKSTV------------SWNIMMNGYLLHGQAEEAIATFRQMKVEKFQPNA 604
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TFV+++ A ++L L+LG S+H + + S T V N L+DMY KCG I SS K F
Sbjct: 605 VTFVNIVRAAAELAALSLGMSVHSSLIQFGFCSH-TPVGNSLVDMYAKCGMIESSKKCFI 663
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
E+ ++N+++W ++SA +G A A+ F M+ KPD V+ ++VL+ACRH GL E
Sbjct: 664 EIRNKNMVSWNTMLSAYAAHGLANCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLAEE 723
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G +F+ M + +E +++HY C+VDLL + G EA +++ M + +W L
Sbjct: 724 GKRIFKEMEERHKIEAKVEHYACMVDLLGKSGLFDEAVEMVRRMRVKASVGVWGALLNSS 783
Query: 652 QR-----------CRIAKYDTLNST 665
+ C++ K + LN +
Sbjct: 784 RMHCNLWLSNAALCQLVKLEPLNPS 808
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 172/657 (26%), Positives = 333/657 (50%), Gaps = 47/657 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFG-GLLSC-DSLNPVE 57
+P VV +NS+I Y+R G ++AL +F YM +G +P ++TF L +C S++ E
Sbjct: 59 VPYPGVVLWNSMIRGYTRAGLHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGSMDFEE 118
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ + + G F +D ++GTAL+ +Y + G L VF+ MP K +VTWN++VS
Sbjct: 119 GLRIHDLIAEMG-FESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLA 177
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G + + LF ++ S V + S +I +S + + +HGLVIK GF
Sbjct: 178 QNGCSSEALRLFRDMHSSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFTSAF- 236
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
++ L++MY +CA +++AE +F++V +D SW T++ A A + +F + LEL+ M
Sbjct: 237 -SSGLIDMYCKCADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYD 295
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V N+ + + A + N G +IH ++ + D+ V ++L++ Y+KC LE A
Sbjct: 296 VRMNKVAAASALQAAAYVGNLEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAE 355
Query: 298 LCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F +I ++++VSW+A+I + + ++ L ++++ ++PN T + VL+
Sbjct: 356 QLFIKIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVA 415
Query: 357 LLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+L HC I+ E+ ++++ YAK GL
Sbjct: 416 ASRLGKSIHCYAIKADVESELETATAVISMYAKCGL------------------------ 451
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
++ T+K +L D +++N + GD + +++K M+ + PD+
Sbjct: 452 --------FSPTLKAFERLPIKDAIAFNALAQGYTQIGDASKAFDVYKNMKLHGVCPDSG 503
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T V +L C+ + A GS ++G I K S+ V + LIDM+ KC ++ ++ +F++
Sbjct: 504 TMVGMLQTCALCSDYARGSCVYGQIIK-HGFDSECHVAHALIDMFTKCDALAAAKSLFDK 562
Query: 533 MT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+++ ++W +++ L+G A+ A+ FR+M+ F+P+ V + ++ A +
Sbjct: 563 CGFEKSTVSWNIMMNGYLLHGQAEEAIATFRQMKVEKFQPNAVTFVNIVRAAAELAALSL 622
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
GM + + + +G + +VD+ + G ++ ++K + N + W T L
Sbjct: 623 GMSVHSSLIQ-FGFCSHTPVGNSLVDMYAKCGMIESSKKCFIEIR-NKNMVSWNTML 677
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/555 (22%), Positives = 253/555 (45%), Gaps = 32/555 (5%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQ 155
+ + +P +V WNS++ + + G ++ + +F + ++ + + +F + +
Sbjct: 55 IVDSVPYPGVVLWNSMIRGYTRAGLHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGSM 114
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
D E G +IH L+ + GF+ ++ + +LV MY + + SA ++F + ++D+V+WNT++
Sbjct: 115 DFEEGLRIHDLIAEMGFESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVS 174
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
LA++ +AL L+ M V + + +I + + L+ + + + +H VIK
Sbjct: 175 GLAQNGCSSEALRLFRDMHSSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFTS 234
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
S L+D Y KC +L A F E+ +K+ SW ++ YA S + L +++
Sbjct: 235 A--FSSGLIDMYCKCADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVM- 291
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
R + + V +S + L G +EY + + G++SD
Sbjct: 292 ---RNYDVRMNKVAAASALQAAAYVGNL--EKGIAIHEYTV--------QQGMMSDISVA 338
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
+ +N +Y++ G+ +L +++ D+VSW+ +IA+ G + E
Sbjct: 339 TSLIN-------------MYSKCGELELAEQLFIKIKDRDVVSWSAMIASFEQAGQHDEA 385
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
L LF+ M P+ T S+L C+ + LG S+H K + + S+ +I
Sbjct: 386 LSLFRDMMRTHFKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD-VESELETATAVIS 444
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY KCG ++K F + ++ I + AL G A +A + ++ M+ G PD
Sbjct: 445 MYAKCGLFSPTLKAFERLPIKDAIAFNALAQGYTQIGDASKAFDVYKNMKLHGVCPDSGT 504
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
++ +L C G ++ ++ + +G + E H ++D+ + L A+ +
Sbjct: 505 MVGMLQTCALCSDYARGSCVYGQIIK-HGFDSECHVAHALIDMFTKCDALAAAKSLFDKC 563
Query: 636 PFPPNALIWRTFLEG 650
F + + W + G
Sbjct: 564 GFEKSTVSWNIMMNG 578
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 140/504 (27%), Positives = 228/504 (45%), Gaps = 65/504 (12%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMY--FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
QIHG +I G L N L+N Y FQ + + K+ V VV WN++I
Sbjct: 23 QIHGSLIVAG----LKPHNQLINAYSLFQRPDL--SRKIVDSVPYPGVVLWNSMIRGYTR 76
Query: 220 SENFGKALELYLRMS-VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ +ALE++ MS + P++ TF + + +CAG + G IH + + E DV+
Sbjct: 77 AGLHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGSMDFEEGLRIHDLIAEMGFESDVY 136
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY 338
+G+ALV+ Y K +L A F ++ K+IV+WN ++ G A + E L+L +
Sbjct: 137 IGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQNGCSS------EALRL-F 189
Query: 339 RPNEFTFSHVLRSSL-----AFQLLQ-------LHCLIIRMGYENYEYVLGSLMTSYAKS 386
R +F + SL A L+ LH L+I+ G+ TS S
Sbjct: 190 RDMHSSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGF-----------TSAFSS 238
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
GLI +Y + + ++ D SW ++AA
Sbjct: 239 GLID-----------------------MYCKCADLYAAECVFEEVFSKDESSWGTMMAAY 275
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
AHNG ++EVLELF MR + + S L A + + NL G ++H + ++ SD
Sbjct: 276 AHNGSFEEVLELFDVMRNYDVRMNKVAAASALQAAAYVGNLEKGIAIHEYTVQQGMM-SD 334
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
V LI+MY KCG + + ++F ++ DR+V++W+A+I++ G AL FR+M
Sbjct: 335 ISVATSLINMYSKCGELELAEQLFIKIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMR 394
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
FKP+ V L +VL C R G + ++ VE E++ V+ + + G
Sbjct: 395 THFKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKA-DVESELETATAVISMYAKCGLFS 453
Query: 627 EAEKIITTMPFPPNALIWRTFLEG 650
K +P +A+ + +G
Sbjct: 454 PTLKAFERLPI-KDAIAFNALAQG 476
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 259/510 (50%), Gaps = 33/510 (6%)
Query: 147 VIHGLSNEQDLEFGEQIHGLV-IKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR 205
++ +D+E G ++H +V F + ++ ++ MY C + +F + +
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 206 DVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
++ WN I+ A +E F A+ ++ + SV P+ T VI +CAGL + LG+ I
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGA-HLCFSEISNKNIVSWNALILGYASKSS 323
H K L DVFVG+AL+ Y KC +E A F + K + SWNAL+ GYA S
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSD 290
Query: 324 P-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTS 382
P ++ L +++ G P+ FT +L + ++ LH G E + + L
Sbjct: 291 PRKALDLYLQMTDSGLDPDWFTIGSLLLA--CSRMKSLH-----YGEEIHGFAL------ 337
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
++GL D ++ L++ Y G+ L +E +VSWN++
Sbjct: 338 --RNGLAVDPFIGISLLSL-------------YICCGKPFAAQVLFDGMEHRSLVSWNVM 382
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
IA + NG E + LF+ M + I P + + ACS+L L LG LH K +
Sbjct: 383 IAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHL 442
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
+ D FV + +IDMY K G IG S +IF+ + +++V +W +I+ G++G + ALE F
Sbjct: 443 -TEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFE 501
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
+M LG KPD +L AC H GLV +G+E F +M + +EP+++HY CVVD+L R
Sbjct: 502 KMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRA 561
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G + +A ++I MP P++ IW + L C+
Sbjct: 562 GRIDDALRLIEEMPGDPDSRIWSSLLSSCR 591
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/555 (27%), Positives = 264/555 (47%), Gaps = 60/555 (10%)
Query: 47 LLSCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS 105
L +C +E G +L V + FC D + T ++ +Y G + VF+ + RK+
Sbjct: 112 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 171
Query: 106 LVTWNSIVSIFGKHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIH 164
L WN+IVS + ++ ED M +F EL+ +E + VI + DL G+ IH
Sbjct: 172 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 231
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSA-EKMFKDVEIRDVVSWNTIIGALAESENF 223
G+ K ++ V N+L+ MY +C + A +++F ++ + V SWN ++ A++ +
Sbjct: 232 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDP 291
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
KAL+LYL+M+ + P+ T ++ +C+ +++ G+ IH ++N L D F+G +L
Sbjct: 292 RKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISL 351
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNE 342
+ Y C A + F + ++++VSWN +I GY+ P +I L ++L G +P E
Sbjct: 352 LSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYE 411
Query: 343 FTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
V + L +LHC ++ +V S++ YAK G I
Sbjct: 412 IAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCI--------- 462
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
G+ R + +L D+ SWN++IA +G KE LEL
Sbjct: 463 --------------GLSQR---------IFDRLREKDVASWNVIIAGYGIHGRGKEALEL 499
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCN 511
F+ M + PD++TF +L ACS + G +LH + K E + C
Sbjct: 500 FEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLE-----HYTC- 553
Query: 512 MLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLN---GFAQRALEKFREMEFL 567
++DM G+ G I ++++ EM D + W++L+S+ ++ G ++ K E+E
Sbjct: 554 -VVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELE-- 610
Query: 568 GFKPDRVALIAVLTA 582
KP+ LI+ L A
Sbjct: 611 PEKPENYVLISNLFA 625
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 240/489 (49%), Gaps = 41/489 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLL-SCDSLNPVEGAQL 61
+N+ +N+I+SAY+R EDA+ +F +I+ +P FT ++ +C L + Q+
Sbjct: 170 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 229
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS-VFEDMPRKSLVTWNSIVSIFGKHG 120
+ +D FVG AL+ +YG+ G ++E V VF+ M K++ +WN+++ + ++
Sbjct: 230 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNS 289
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ L+ ++ S + + ++ S + L +GE+IHG ++NG + +
Sbjct: 290 DPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGI 349
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL+++Y C ++A+ +F +E R +VSWN +I +++ +A+ L+ +M D + P
Sbjct: 350 SLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQP 409
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ + V +C+ L LGK +H +K L D+FV S+++D YAK + + F
Sbjct: 410 YEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIF 469
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
+ K++ SWN +I GY L E +L+LG +P++FTF+ +L
Sbjct: 470 DRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGIL---------- 519
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL----NIPRAVVPANIIAGIY 415
+ C + +GL+ D L + + NI + + +
Sbjct: 520 MAC---------------------SHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDML 558
Query: 416 NRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELF-KYMRAARIYPDNYT 473
R G+ ++ ++L+ ++ PD W+ ++++C +G+ ++ K + P+NY
Sbjct: 559 GRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYV 618
Query: 474 FVSLLSACS 482
+S L A S
Sbjct: 619 LISNLFAGS 627
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 142/276 (51%), Gaps = 14/276 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M + V S+N+++ Y++ AL ++L M + G +P FT G LL +C + + G
Sbjct: 270 MDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYG 329
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ L+NGL D F+G +LL LY G +F+ M +SLV+WN +++ + +
Sbjct: 330 EEIHGFALRNGL-AVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQ 388
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G ++ + LF +++ + E + + V S L G+++H +K ++ V
Sbjct: 389 NGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFV 448
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++S+++MY + I ++++F + +DV SWN II +ALEL+ +M +
Sbjct: 449 SSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGL 508
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
P+ TF ++ +C+ HA ++++ LE
Sbjct: 509 KPDDFTFTGILMACS-----------HAGLVEDGLE 533
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/497 (30%), Positives = 250/497 (50%), Gaps = 39/497 (7%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
+Q+H I+ A+ ++++Y + A +FK +E V++W ++I +
Sbjct: 24 AKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTD 82
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
F +AL ++ M P+ F V+ SC + + G+S+H +++ ++CD++
Sbjct: 83 QSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGY 338
G+AL++ Y+K ++ F + K++VS+N +I GYA S ++ ++ E+
Sbjct: 143 GNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDL 202
Query: 339 RPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
+P+ FT S VL + ++H +IR G ++ Y+ SL+ YAKS I D
Sbjct: 203 KPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIED--- 259
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
+ ++ S L R D +SWN ++A NG Y E
Sbjct: 260 -----------------------------SERVFSHLYRRDSISWNSLVAGYVQNGRYNE 290
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
L LF+ M +A++ P F S++ AC+ L L LG LHG + + + F+ + L+
Sbjct: 291 ALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF-GRNIFIASALV 349
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
DMY KCG+I ++ KIF+ M + ++WTA+I L+G A+ F EM+ G KP++V
Sbjct: 350 DMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQV 409
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
A +AVLTAC H GLV E F M + YG+ E++HY V DLL R G L+EA I+
Sbjct: 410 AFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISK 469
Query: 635 MPFPPNALIWRTFLEGC 651
M P +W T L C
Sbjct: 470 MRVEPTGSVWSTLLSSC 486
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 222/450 (49%), Gaps = 40/450 (8%)
Query: 6 VVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQA 63
V+++ S+I ++ AL F+ M G P F +L SC + + G +
Sbjct: 70 VLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+++ G+ C D + G AL+ +Y + +D V VFE MPRK +V++N++++ + + G E
Sbjct: 130 FIVRLGMDC-DLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYE 188
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
D + + E+ S++ + V+ S D+ G++IHG VI+ G D ++ + +SLV
Sbjct: 189 DALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLV 248
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
+MY + A I +E++F + RD +SWN+++ ++ + +AL L+ +M V P
Sbjct: 249 DMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAV 308
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
F VI +CA L LGK +H V++ ++F+ SALVD Y+KC N++ A F +
Sbjct: 309 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRM 368
Query: 304 SNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHC 362
+ + VSW A+I+G+A ++ L E+ + G +PN+ F VL
Sbjct: 369 NLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVL------------- 415
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN----IPRAVVPANIIAGIYNRT 418
T+ + GL+ +A + ++ + + + +A + R
Sbjct: 416 ------------------TACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRA 457
Query: 419 GQYNETVKLLSQLE-RPDIVSWNIVIAACA 447
G+ E +S++ P W+ ++++C+
Sbjct: 458 GKLEEAYDFISKMRVEPTGSVWSTLLSSCS 487
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/520 (25%), Positives = 239/520 (45%), Gaps = 57/520 (10%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ QL A ++ + + ++ +Y L E + VF+ + ++ W S++ F
Sbjct: 23 QAKQLHAQFIRTQSLSHTS--ASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCF 80
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ F E+ S + F V+ + DL FGE +HG +++ G D +L
Sbjct: 81 TDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
N+L+NMY + GI S K+F+ + +DVVS+NT+I A+S + AL + M
Sbjct: 141 YTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTS 200
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ P+ T V+ + + + GK IH VI+ ++ DV++GS+LVD YAK +E +
Sbjct: 201 DLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 260
Query: 297 HLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
FS + ++ +SWN+L+ GY ++ L +++ RP FS V+ +
Sbjct: 261 ERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHL 320
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L QLH ++R G+ ++ +L+ Y+K G I A
Sbjct: 321 ATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARK----------------- 363
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
I++R ++E VSW +I A +G E + LF+ M+ + P+
Sbjct: 364 --IFDRMNLHDE-------------VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQ 408
Query: 472 YTFVSLLSACSK--LCNLALG-----SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
FV++L+ACS L + A G + ++GL ++ E ++ + D+ G+ G +
Sbjct: 409 VAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA-------VADLLGRAGKLE 461
Query: 525 SSVKIFNEM-TDRNVITWTALISALGLNG---FAQRALEK 560
+ ++M + W+ L+S+ ++ A++ EK
Sbjct: 462 EAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEK 501
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 148/255 (58%), Gaps = 3/255 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
MP ++VVS+N++I+ Y++ G EDALRM M +P FT +L + ++ ++G
Sbjct: 166 MPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKG 225
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ V++ G+ +D ++G++L+ +Y + +++ VF + R+ ++WNS+V+ + +
Sbjct: 226 KEIHGYVIRKGI-DSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQ 284
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + LF ++V ++V +F VI ++ L G+Q+HG V++ GF + +
Sbjct: 285 NGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFI 344
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
A++LV+MY +C I +A K+F + + D VSW II A + +A+ L+ M V
Sbjct: 345 ASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 404
Query: 239 FPNQTTFVYVINSCA 253
PNQ FV V+ +C+
Sbjct: 405 KPNQVAFVAVLTACS 419
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 170/603 (28%), Positives = 310/603 (51%), Gaps = 43/603 (7%)
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+QL + V K G+ D F T L LY + L VF++ P ++ WNS + + +
Sbjct: 21 SQLHSQVFKTGIL-HDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCR 79
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGV-IHGLSNEQDLEFGEQIHGLVIKNG-FDYEL 176
E+ + LF ++ + ++ + + + + + LE G+ IHG KN ++
Sbjct: 80 EKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDM 139
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SV 235
V ++LV +Y +C + A K+F++ + D V W +++ ++ + +AL L+ +M +
Sbjct: 140 FVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMM 199
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D V + T V V+++CA L N G +H VI+ + D+ + ++L++ YAK +
Sbjct: 200 DCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKI 259
Query: 296 AHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A FS++ K+++SW+ +I YA+ +++ ++ L E+++ + PN T L++
Sbjct: 260 AANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV 319
Query: 355 FQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ L+ +H + + G+E V +L+ Y K + P
Sbjct: 320 SRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKC-------------SCP-------- 358
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+E V L +L + D+VSW +++ A NG + + +F+ M + I PD
Sbjct: 359 -----------DEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPD 407
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
V +L+A S+L LHG + ++ +S+ FV LI++Y KCGS+G +VK+F
Sbjct: 408 AVAVVKILAASSELGIFQQALCLHGYVVRSGF-NSNVFVGASLIELYSKCGSLGDAVKLF 466
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLV 589
M R+V+ W+++I+A G++G ALE F +M + +P+ V +++L+AC H GLV
Sbjct: 467 KGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLV 526
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG+++F+RM Y + P+ +H+ +VDLL R G L +A II MP P +W L
Sbjct: 527 EEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLG 586
Query: 650 GCQ 652
C+
Sbjct: 587 ACR 589
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 162/563 (28%), Positives = 272/563 (48%), Gaps = 55/563 (9%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMI-NRGFEPTQFTFG-GLLSCDSLNPVE-G 58
P NV +NS + +Y R E+ LR+F MI G P FT L +C L +E G
Sbjct: 63 PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ KN +D FVG+AL+ LY + G + E + VFE+ R V W S+V+ + +
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQ 182
Query: 119 HGFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ E+ + LF ++V + V L + V V+ + +++ G +HGLVI+ FD +L
Sbjct: 183 NNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLP 242
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ NSL+N+Y + A +F + +DV+SW+T+I A +E +AL L+ M
Sbjct: 243 LVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKR 302
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN T V + +CA +N GK IH + E D V +AL+D Y KC + A
Sbjct: 303 FEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAV 362
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + K++VSW AL+ GYA + S+ + +L G +P+ +L +S
Sbjct: 363 DLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELG 422
Query: 357 LLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ Q LH ++R G+ + +V SL+ Y+K G + DA+ + + V+ +++IA
Sbjct: 423 IFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIA 482
Query: 413 --GIYNRTGQ----YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAA 465
GI+ R G+ +++ VK + RP+ V++ +++AC+H G +E L++F M
Sbjct: 483 AYGIHGRGGEALEIFDQMVK--NSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDY 540
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
++ PD+ F +++D+ G+ G +G
Sbjct: 541 QLRPDSEHF------------------------------------GIMVDLLGRIGQLGK 564
Query: 526 SVKIFNEMT-DRNVITWTALISA 547
++ I N M W AL+ A
Sbjct: 565 AMDIINRMPIPAGPHVWGALLGA 587
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 194/397 (48%), Gaps = 40/397 (10%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
K HAK+ L+ D + + Y + ++ A + F +I N WN +I G+A+
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 322 SS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVL 376
+S+ L ++++ G +P++F F L+S LQ +H ++ G N +V
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL-SQLERPD 435
+L+ YAK G I E +L+ ++ D
Sbjct: 857 AALVDMYAKCGDI---------------------------------EAARLVFDKMAVRD 883
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
+VSW +I+ AHNG E L F MR++ + P+ + +S+L AC L L G H
Sbjct: 884 LVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHS 943
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
+ +T D V ++DMY KCGS+ + +F+E ++++ W+A+I++ G++G +
Sbjct: 944 YVIQTGF-EFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGR 1002
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
+A++ F +M G +P V VL+AC H GL+ EG F+ M + + ++ +Y C+
Sbjct: 1003 KAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACM 1062
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
VDLL R G L EA +I MP P+A IW + L C+
Sbjct: 1063 VDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACR 1099
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 196/444 (44%), Gaps = 45/444 (10%)
Query: 117 GKHGFVEDCMFLFCEL-----VRSEVALTESSF--VGVIHGLSNEQDLEFGEQIHGLVIK 169
GK ++ D FL + + TES + +G G ++ H +
Sbjct: 686 GKEVYIPDLDFLLHDTGAVLQFWQRIKATESKYKTIGSAPGTDTISCFSCLKKTHAKIFA 745
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
G Y+ + MY I +A +F+D+ WN +I A F +LEL
Sbjct: 746 YGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLEL 805
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
Y +M + P++ F + + SCAGL + GK IH ++ D+FV +ALVD YAK
Sbjct: 806 YSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAK 865
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHV 348
C ++E A L F +++ +++VSW ++I GYA + +L++ G PN + V
Sbjct: 866 CGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSV 925
Query: 349 LRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
L + L+ H +I+ G+E V ++M Y+K G +L++ R
Sbjct: 926 LLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCG----------SLDLARC 975
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+ ++ET D+V W+ +IA+ +G ++ ++LF M
Sbjct: 976 L---------------FDETAG-------KDLVCWSAMIASYGIHGHGRKAIDLFDQMVK 1013
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
A + P + TF +LSACS L G L+ + +I+ ++D+ G+ G +
Sbjct: 1014 AGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLS 1073
Query: 525 SSVKIFNEM-TDRNVITWTALISA 547
+V + M + + W +L+ A
Sbjct: 1074 EAVDLIENMPVEPDASIWGSLLGA 1097
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 176/379 (46%), Gaps = 30/379 (7%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D+ + T +Y +D VFED+P WN ++ F G + L+ +++
Sbjct: 751 DSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMM 810
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
+ + +F + + DL+ G+ IH ++ G +L V +LV+MY +C I
Sbjct: 811 EKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIE 870
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
+A +F + +RD+VSW ++I A + + L + M V PN+ + + V+ +C
Sbjct: 871 AARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACG 930
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
L G+ H+ VI+ E D+ V +A++D Y+KC +L+ A F E + K++V W+A
Sbjct: 931 NLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSA 990
Query: 314 LILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY 372
+I Y +I L ++++ G RP+ TF+ VL + LL+ + ++ E
Sbjct: 991 MIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTE-- 1048
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
E+V+ +++YA + + R GQ +E V L+ +
Sbjct: 1049 EFVIARKLSNYA-------------------------CMVDLLGRAGQLSEAVDLIENMP 1083
Query: 433 -RPDIVSWNIVIAACA-HN 449
PD W ++ AC HN
Sbjct: 1084 VEPDASIWGSLLGACRIHN 1102
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 149/263 (56%), Gaps = 12/263 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFT-FGGLLSCD-SLNPVEG 58
MP+++V+S++++I+ Y+ +AL +F MI + FEP T L +C S N EG
Sbjct: 267 MPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEG 326
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ + G F D V TAL+ +Y + C DE V +F+ +P+K +V+W +++S + +
Sbjct: 327 KKIHKIAVWKG-FELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQ 385
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ---IHGLVIKNGFDYE 175
+G M +F ++ + + V V+ L+ +L +Q +HG V+++GF+
Sbjct: 386 NGMAYKSMGVFRNMLSDGI---QPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSN 442
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V SL+ +Y +C + A K+FK + +RDVV W+++I A G+ALE++ +M
Sbjct: 443 VFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVK 502
Query: 236 D-IVFPNQTTFVYVINSC--AGL 255
+ V PN TF+ ++++C AGL
Sbjct: 503 NSTVRPNNVTFLSILSACSHAGL 525
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 128/275 (46%), Gaps = 17/275 (6%)
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
+ L + K+G++ D F T LN +Y + K+ + P+
Sbjct: 20 VSQLHSQVFKTGILHDTF-FATKLN------------SLYAKCASLQAARKVFDETPHPN 66
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMR-AARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
+ WN + + ++E L LF M A PDN+T L AC+ L L LG +H
Sbjct: 67 VHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIH 126
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
G KK + I SD FV + L+++Y KCG +G ++K+F E + + WT++++ N
Sbjct: 127 GFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDP 186
Query: 555 QRALEKFREMEFLG-FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
+ AL F +M + D V L++V++AC V+ G + + R + ++ +
Sbjct: 187 EEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRRE-FDGDLPLVN 245
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+++L + G K A + + MP + + W T +
Sbjct: 246 SLLNLYAKTGCEKIAANLFSKMP-EKDVISWSTMI 279
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFT-FGGLLSCDSLNPV-EG 58
M R++VS+ S+IS Y+ GY + L F M + G P + + LL+C +L + +G
Sbjct: 879 MAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKG 938
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V++ G F D V TA++ +Y + G LD +F++ K LV W+++++ +G
Sbjct: 939 EWFHSYVIQTG-FEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGI 997
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG + LF ++V++ V + +F V+ S+ LE G+ L+ + E ++
Sbjct: 998 HGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTE-----EFVI 1052
Query: 179 ANSL------VNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
A L V++ + + A + +++ + D W +++GA
Sbjct: 1053 ARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGA 1097
>gi|387965715|gb|AFK13844.1| cyclin domain/pentatricopeptide repeat-containing protein [Beta
vulgaris subsp. vulgaris]
Length = 877
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 186/673 (27%), Positives = 342/673 (50%), Gaps = 27/673 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMIN--RGFEPTQFTFGGLLS-CDSLNPVE 57
MP + V +N ++S S + + +Y ++ + E + + +L C L +
Sbjct: 104 MPKYDTVVWNIVLSGLSGSQVHDGEVMRLVYDMHTCKETELSPVSIAIVLPVCARLRVLN 163
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCL-DEVVSVFEDMPRKSLVTWNSIVSI 115
G L +K+G + ++ VG +L+ +Y + G + D F ++ K +++WN++++
Sbjct: 164 AGRSLHCYAVKSG-WASETLVGNSLVSMYAKCGLVYDGAYESFCEINDKDVISWNALMAG 222
Query: 116 FGKHGFVEDCMFLFCELVRSEVA---LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG- 171
F ++GF D F ++ VA T +S + V L + G+++H +K+
Sbjct: 223 FIENGFYNDAWVFFRRMLLGPVAPNYATLTSILPVCAMLDGDDAYSLGKELHAYALKHSD 282
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
++ + N+L++ Y + + AE +F + RD+VSWN +IG A + + KA+ L+
Sbjct: 283 LQKDVFIVNALMSFYLRMGVVEGAEALFDGMASRDLVSWNVLIGGYASNNEYSKAVHLFQ 342
Query: 232 RM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAK 289
+ S + P T + V+ +CA LQN + K IH + + L D V +AL+ YAK
Sbjct: 343 NLVSSQTLEPGSVTLISVLPACAHLQNLWMVKQIHGFISQCPTLYDDTAVSNALISSYAK 402
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHV 348
C++L+ + F S ++++SWN+L+ +A + + LL ++ + P+ T +
Sbjct: 403 CNDLDSSFRTFIISSQRDLISWNSLLDAFAERGCELQLLNLLYQMSEERVGPDSITILTL 462
Query: 349 LR-----SSLAFQLLQLHCLIIR--MGYENYEYVLG-SLMTSYAKSGLISDALAFVTALN 400
++ S L+ ++ + H ++R + + + LG +L+ +YAK G ++ A + +
Sbjct: 463 IQFYGSISKLS-KIKEAHGYLLRACLCQNDTQPTLGNALLDAYAKCGCVNYANK-IYKIK 520
Query: 401 IPRAVVPANI-IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ + N I G N Q E K L + + ++N++I A N ++ + L
Sbjct: 521 LGEGKLKWNSEIPGYINWNIQAGE-CKALEGISQTHRTTFNLMIRAYVENNCLEQAVALL 579
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
++ PD T +S+L C K+ + L HG + + I D + +ID+Y K
Sbjct: 580 FDLQVQGAKPDAMTIMSILPICVKMASAYLLRQCHGYMVRACI--EDIQLKGTMIDIYSK 637
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
CG + + K+F T ++++ +TALI ++G + AL F+ M LG +PD V L A+
Sbjct: 638 CGYLSLANKLFWSSTHKDLVMFTALIGGYAMHGMGKEALVLFKHMLVLGLRPDHVVLTAI 697
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
L+AC H GLV EG++ F+ + R YG++P M+ Y CVVDLL R G +K+A +T MP
Sbjct: 698 LSACSHAGLVDEGLKFFDSIERVYGMKPTMEQYGCVVDLLARRGKIKDAYTFVTEMPVKV 757
Query: 640 NALIWRTFLEGCQ 652
N+ IW L C+
Sbjct: 758 NSNIWSLLLGACR 770
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 159/648 (24%), Positives = 278/648 (42%), Gaps = 95/648 (14%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINR--GFEPTQFTF-GGLLSCDSLNPVE-GAQLQAS 64
++ +I+A S G ++ L +FL + GF+P L SC +++ + G L +
Sbjct: 9 WSELINAQSINGKHDEVLNLFLSKLKHPFGFKPDHLVLQTALKSCATISSLNVGRALHSL 68
Query: 65 VLKNG-LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS-IFGKHGFV 122
V+K G + C V LL +Y + D+ + MP+ V WN ++S + G
Sbjct: 69 VVKLGHISCLS--VSKGLLNVYAKGKDFDDCKKLLYQMPKYDTVVWNIVLSGLSGSQVHD 126
Query: 123 EDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ M L ++ E L+ S V+ + + L G +H +K+G+ E LV NS
Sbjct: 127 GEVMRLVYDMHTCKETELSPVSIAIVLPVCARLRVLNAGRSLHCYAVKSGWASETLVGNS 186
Query: 182 LVNMYFQCAGIWS-AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
LV+MY +C ++ A + F ++ +DV+SWN ++ E+ + A + RM + V P
Sbjct: 187 LVSMYAKCGLVYDGAYESFCEINDKDVISWNALMAGFIENGFYNDAWVFFRRMLLGPVAP 246
Query: 241 NQTTFVYVINSCAGLQNS---ILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLEGA 296
N T ++ CA L LGK +HA +K++ L+ DVF+ +AL+ FY + +EGA
Sbjct: 247 NYATLTSILPVCAMLDGDDAYSLGKELHAYALKHSDLQKDVFIVNALMSFYLRMGVVEGA 306
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL--QLGYRPNEFTFSHVLRSSLA 354
F ++++++VSWN LI GYAS + + L + L P T VL +
Sbjct: 307 EALFDGMASRDLVSWNVLIGGYASNNEYSKAVHLFQNLVSSQTLEPGSVTLISVLPACAH 366
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
Q L Q+H G IS + A++ +
Sbjct: 367 LQNLWMVKQIH-------------------------GFISQCPTLYDDTAVSNALISS-- 399
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
Y + + + + + D++SWN ++ A A G ++L L M R+ PD
Sbjct: 400 ----YAKCNDLDSSFRTFIISSQRDLISWNSLLDAFAERGCELQLLNLLYQMSEERVGPD 455
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT--FVCNMLIDMYGKCGSIGSSVK 528
+ T ++L+ + L+ HG + + + +DT + N L+D Y KCG + + K
Sbjct: 456 SITILTLIQFYGSISKLSKIKEAHGYLLRACLCQNDTQPTLGNALLDAYAKCGCVNYANK 515
Query: 529 IFNEMTDRNVITWTALISAL-----------GLNGFAQ--------------------RA 557
I+ + W + I L G +Q +A
Sbjct: 516 IYKIKLGEGKLKWNSEIPGYINWNIQAGECKALEGISQTHRTTFNLMIRAYVENNCLEQA 575
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACR-----------HGGLVREGME 594
+ +++ G KPD + ++++L C HG +VR +E
Sbjct: 576 VALLFDLQVQGAKPDAMTIMSILPICVKMASAYLLRQCHGYMVRACIE 623
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 435 DIVSWNIVIAACAHNGDYKEVLELF--KYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
D W+ +I A + NG + EVL LF K PD+ + L +C+ + +L +G +
Sbjct: 5 DFKKWSELINAQSINGKHDEVLNLFLSKLKHPFGFKPDHLVLQTALKSCATISSLNVGRA 64
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
LH L+ K IS + V L+++Y K K+ +M + + W ++S L
Sbjct: 65 LHSLVVKLGHISCLS-VSKGLLNVYAKGKDFDDCKKLLYQMPKYDTVVWNIVLSGL 119
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 162/519 (31%), Positives = 256/519 (49%), Gaps = 53/519 (10%)
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
+I + ++L G+Q+H ++I+ G ++N +N+Y +C + K+F + R+
Sbjct: 81 LIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRN 140
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
+VSW +II A + F +AL + +M ++ Q V+ +C L G +H
Sbjct: 141 MVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHC 200
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS----KS 322
V+K C++FVGS L D Y+KC L A F E+ K+ V W ++I G+ K
Sbjct: 201 LVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKK 260
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL-AFQLLQ-------LHCLIIRMGYENYEY 374
+ T+ ++ + F HVL S+L A L+ LH I+++G+E YE
Sbjct: 261 ALTAYMKMV-------TDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFE-YET 312
Query: 375 VLGSLMTS-YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
+G+ +T Y+KSG V+A N+ + + ++ I+
Sbjct: 313 FIGNALTDMYSKSG------DMVSASNVFQ--IHSDCIS--------------------- 343
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
IVS +I ++ L F +R I P+ +TF SL+ AC+ L GS L
Sbjct: 344 --IVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQL 401
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
HG + K D FV + L+DMYGKCG S+++F+E+ + + I W L+ +G
Sbjct: 402 HGQVVKFNF-KRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGL 460
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
+ A+E F M G KP+ V + +L C H G+V +G+ F M + YGV P+ +HY
Sbjct: 461 GRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYS 520
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
CV+DLL R G LKEAE I MPF PN W +FL C+
Sbjct: 521 CVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACK 559
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/540 (26%), Positives = 269/540 (49%), Gaps = 58/540 (10%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G QL A +++ G + F+ L LY + G LD + +F+ M ++++V+W SI++ F
Sbjct: 93 KGKQLHAMLIRGGCL-PNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGF 151
Query: 117 GKHGFVEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ ++ + FC++ + E+A T+ + V+ ++ ++FG Q+H LV+K GF E
Sbjct: 152 AHNSRFQEALSSFCQMRIEGEIA-TQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCE 210
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L V ++L +MY +C + A K F+++ +D V W ++I ++ +F KAL Y++M
Sbjct: 211 LFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVT 270
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D VF +Q +++C+ L+ S GKS+HA ++K E + F+G+AL D Y+K ++
Sbjct: 271 DDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVS 330
Query: 296 AHLCFSEISN-KNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F S+ +IVS A+I GY ++ ++L + G PNEFTF+ ++++
Sbjct: 331 ASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACA 390
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
L QLH +++ ++ +V +L+ Y K GL
Sbjct: 391 NQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGL--------------------- 429
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
++ +++L ++E PD ++WN ++ + +G + +E F M + P
Sbjct: 430 -----------FDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKP 478
Query: 470 DNYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ TFV+LL CS + G ++G++ K E S +ID+ G+ G
Sbjct: 479 NAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSC-------VIDLLGRAGK 531
Query: 523 IGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ + N M + NV W + + A ++G +RA KF + + +P+ +L+
Sbjct: 532 LKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERA--KFAADKLMKLEPENSGAHVLLS 589
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 223/488 (45%), Gaps = 43/488 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M RN+VS+ SII+ ++ ++AL F M G TQF +L +C SL ++ G
Sbjct: 136 MSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFG 195
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ V+K G C + FVG+ L +Y + G L + FE+MP K V W S++ F K
Sbjct: 196 TQVHCLVVKCGFGC-ELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVK 254
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + + ++V +V + + + S + FG+ +H ++K GF+YE +
Sbjct: 255 NGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFI 314
Query: 179 ANSLVNMYFQCAGIWSAEKMFK-DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
N+L +MY + + SA +F+ + +VS II E + KAL ++ +
Sbjct: 315 GNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRG 374
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ PN+ TF +I +CA G +H +V+K + D FV S LVD Y KC + +
Sbjct: 375 IEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSI 434
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F EI N + ++WN L+ ++ +I ++ G +PN TF ++L+
Sbjct: 435 QLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGC---- 490
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIA 412
+ +G++ D L + +++ VVP + +
Sbjct: 491 ---------------------------SHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVI 523
Query: 413 GIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+ R G+ E ++ + P++ W + AC +GD + F + ++ P+N
Sbjct: 524 DLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERA--KFAADKLMKLEPEN 581
Query: 472 YTFVSLLS 479
LLS
Sbjct: 582 SGAHVLLS 589
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 187/415 (45%), Gaps = 43/415 (10%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T ++I + A + GK +HA +I+ + F+ + ++ Y+KC L+ F
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133
Query: 301 SEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL- 358
++S +N+VSW ++I G+A S ++ ++ G +F S VL++ + +
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQ 193
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
Q+HCL+++ G+ +V +L Y+K G +SDA
Sbjct: 194 FGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDA----------------------- 230
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
K ++ D V W +I NGD+K+ L + M ++ D +
Sbjct: 231 ---------CKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLC 281
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S LSACS L + G SLH I K +TF+ N L DMY K G + S+ +F +D
Sbjct: 282 STLSACSALKASSFGKSLHATILKLG-FEYETFIGNALTDMYSKSGDMVSASNVFQIHSD 340
Query: 536 -RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
++++ TA+I ++AL F ++ G +P+ +++ AC + + G +
Sbjct: 341 CISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQ 400
Query: 595 LFERMNR-SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
L ++ + ++ +P + +VD+ + G + ++ + P+ + W T +
Sbjct: 401 LHGQVVKFNFKRDPFVS--STLVDMYGKCGLFDHSIQLFDEIE-NPDEIAWNTLV 452
>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 190/671 (28%), Positives = 318/671 (47%), Gaps = 64/671 (9%)
Query: 1 MPDRNVVSFNSIISA-YSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVE 57
+P ++ +NS + +SR Y + L + M + P FTF + S + +
Sbjct: 69 LPFKDTFLWNSFLKTLFSRSLYPQ-FLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRS 127
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G L A K G F ++ VG++ + LY R +++ V VF+++P + +V W ++V +
Sbjct: 128 GMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYV 187
Query: 118 KHGFVEDCMFLFCELVR---SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
++G E + E+ R + G N DL G +HGLV+KNG
Sbjct: 188 QNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGC 247
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
L + +S+++MY +C A + F +V +D++SW ++I A + + M
Sbjct: 248 LLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEML 307
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSIL---GKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
+ V P+ ++ +G NS+ GK+ H +I+ D V ++L+ Y K
Sbjct: 308 ENQVCPDGMVIGCIL---SGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFG 364
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLR 350
L A F S +I WN +I+GY + I L E+ LG R +
Sbjct: 365 MLSFAERLFQR-SQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIA 423
Query: 351 SSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
S + L HC +I+ G + + ++ +L
Sbjct: 424 SCGQLGEINLGRSIHCNVIK--------------------GFVDETISVTNSL------- 456
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
+Y + + N + ++ ++ ER D++ WN +I+A H Y+E + LF M
Sbjct: 457 -----IEMYGKCDKMNVSWRIFNRSER-DVILWNALISAHIHVKHYEEAISLFDIMIMED 510
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM-----LIDMYGKCG 521
P+ T V +LSACS L L G LH I+ F N+ L+DMY KCG
Sbjct: 511 QNPNTATLVVVLSACSHLAFLEKGERLH------RYINEKGFKLNLPLGTALVDMYAKCG 564
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ S ++F+ M +++VI W A+IS G+NG+A+ A+E F ME KP+ + +++L+
Sbjct: 565 QLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLS 624
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC H GLV EG +F +M +SY V+P + HY C+VDLL R +L+EAE+++ +MP PP+
Sbjct: 625 ACAHAGLVEEGKNVFAKM-QSYSVKPNLKHYTCMVDLLGRSCNLEEAEELVLSMPIPPDG 683
Query: 642 LIWRTFLEGCQ 652
+W L C+
Sbjct: 684 GVWGALLSACK 694
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 135/564 (23%), Positives = 236/564 (41%), Gaps = 81/564 (14%)
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H + + G +A L+++Y S+ +F + +D WN+ + L +
Sbjct: 31 HAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLY 90
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSA 282
+ L Y M + V PN TF V +S A G ++HA K + VGS+
Sbjct: 91 PQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSS 150
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLG---Y 338
V Y++CD + A F EI +++V+W AL++GY S + + E+ ++G
Sbjct: 151 FVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQ 210
Query: 339 RPNEFTFSH--------------------VLRSSLAFQL--------LQLHCLIIRMGYE 370
+PN T V+++ + L + C + R Y+
Sbjct: 211 KPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQ 270
Query: 371 NYEYVLG-------SLMTSYAKSGLISDALAFVTAL----NIPRAVVPANIIAGIYNRTG 419
++ V+ S++ YA+ G++SD + F + P +V I++G N
Sbjct: 271 SFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSVD 330
Query: 420 QY----------------NETV--KLLS---------------QLERPDIVSWNIVIAAC 446
Y +E V LLS Q + I WN +I
Sbjct: 331 VYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQRSQGSIEYWNFMIVGY 390
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
G + ++LF+ M+ I ++ VS +++C +L + LG S+H + K +
Sbjct: 391 GRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKG-FVDET 449
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
V N LI+MYGKC + S +IFN ++R+VI W ALISA + A+ F M
Sbjct: 450 ISVTNSLIEMYGKCDKMNVSWRIFNR-SERDVILWNALISAHIHVKHYEEAISLFDIMIM 508
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
P+ L+ VL+AC H + +G L +N G + + +VD+ + G L+
Sbjct: 509 EDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEK-GFKLNLPLGTALVDMYAKCGQLE 567
Query: 627 EAEKIITTMPFPPNALIWRTFLEG 650
++ ++ +M + + W + G
Sbjct: 568 KSREVFDSM-MEKDVICWNAMISG 590
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 161/503 (32%), Positives = 267/503 (53%), Gaps = 14/503 (2%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNM--YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+QIH +++ ++ A+ L + + + A K+F + ++ SWN +I ALA
Sbjct: 156 KQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALA 215
Query: 219 ESENFGKALELYLRMSVDIVF-PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
S + +++ +++RM D F PN+ TF +I + A + ++GK++H IK + DV
Sbjct: 216 TSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDV 275
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEI--SNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
FV ++L+ FYA C +L+ A+L F I +NK+IVSWN+++ G+ P L E ++
Sbjct: 276 FVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMR 335
Query: 336 -LGYRPNEFTFSHVLRS---SLAFQLLQLHC-LIIRMGYENYEYVLGSLMTSYAKSGLIS 390
G PN T V+ + ++ L + C I R V + + + K G +
Sbjct: 336 NEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVE 395
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
A + R VV I Y + ++ + + R DI +WN++I+ +G
Sbjct: 396 IARGLFDNME-KRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSG 454
Query: 451 DYKEVLELFKYMRAAR--IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
KE L +F+ ++ + PD T +S LSAC++L + +G +HG IKK E I +
Sbjct: 455 RPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKK-ERIQLNRN 513
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+ LIDMY K G + ++++F+ + +++V W+A+I+ L ++G + A+E F +M+
Sbjct: 514 LATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQ 573
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
KP+ V +L AC H GLV EG LF+ M R YGV P+ HY C+VD+L R GHL+EA
Sbjct: 574 VKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEA 633
Query: 629 EKIITTMPFPPNALIWRTFLEGC 651
K I MP P+A +W L C
Sbjct: 634 LKFIEGMPLAPSASVWGALLGAC 656
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/548 (23%), Positives = 249/548 (45%), Gaps = 43/548 (7%)
Query: 44 FGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR 103
F S L + L+ + L + ++ F A + LD VF+ +P+
Sbjct: 146 FQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAA----FSSFSALDYARKVFDQIPQ 201
Query: 104 KSLVTWNSIVSIFGKHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQ 162
+L +WN ++ + +F ++ S + +F +I ++ + G+
Sbjct: 202 PNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKA 261
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE--IRDVVSWNTIIGALAES 220
+HG+ IK F ++ V NSL++ Y C + A +F+ +E +D+VSWN+++ +
Sbjct: 262 VHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQG 321
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
KAL+L+ RM + V PN T V V+++CA N LG+ + + +N + ++ V
Sbjct: 322 GYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVC 381
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-----------PTSIFL 329
+A +D + KC +E A F + +++VSW +I GYA S P
Sbjct: 382 NATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIP 441
Query: 330 LIELLQLGY----RPNEFTFSHVLRSSLA-FQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
+L GY RP E +LA F+ LQL + G + L S +++ A
Sbjct: 442 AWNVLISGYEQSGRPKE---------ALAIFRELQL----TKSGARPDQVTLLSTLSACA 488
Query: 385 KSGLISDALAFVTALNIPRAVVPANI---IAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
+ G + + R + N+ + +Y+++G + +++ + D+ W+
Sbjct: 489 QLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSA 548
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+IA A +G + +ELF M+ ++ P++ TF +LL ACS + G L +++
Sbjct: 549 MIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVY 608
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRA 557
+ T + ++D+ G+ G + ++K M + W AL+ A ++G A++A
Sbjct: 609 GVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKA 668
Query: 558 LEKFREME 565
+ E+E
Sbjct: 669 CSRLLEIE 676
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 122/525 (23%), Positives = 223/525 (42%), Gaps = 82/525 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI-NRGFEPTQFTFGGLLSCDSLNP--VE 57
+P N+ S+N +I A + ++ +F+ M+ + F P +FTF L+ + +
Sbjct: 199 IPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLV 258
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE--DMPRKSLVTWNSIVSI 115
G + +K F D FV +L+ Y G LD VFE + K +V+WNS+V+
Sbjct: 259 GKAVHGMAIKTS-FGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTG 317
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
F + G+ + + LF + V + V V+ + +L G ++ + +N
Sbjct: 318 FVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMN 377
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY----- 230
L V N+ ++M+ +C + A +F ++E RDVVSW TII A+ G A +++
Sbjct: 378 LNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPR 437
Query: 231 ----------------------------LRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
L+++ P+Q T + +++CA L +G+
Sbjct: 438 KDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGE 497
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
IH + K ++ + + ++L+D Y+K ++E A F I NK++ W+A+I G A
Sbjct: 498 WIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHG 557
Query: 323 -SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMT 381
+I L +++ + +PN TF+ +L+
Sbjct: 558 RGEAAIELFLDMQETQVKPNSVTFT-------------------------------NLLC 586
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDI 436
+ + SGL+ + + VVP + + + R G E +K + + P
Sbjct: 587 ACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSA 646
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYM--RAARIYPDNYTFVSLLS 479
W ++ AC +G+ LEL + R I P N+ LLS
Sbjct: 647 SVWGALLGACCIHGN----LELAEKACSRLLEIEPGNHGAYVLLS 687
>gi|302816264|ref|XP_002989811.1| hypothetical protein SELMODRAFT_130525 [Selaginella moellendorffii]
gi|300142377|gb|EFJ09078.1| hypothetical protein SELMODRAFT_130525 [Selaginella moellendorffii]
Length = 756
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 193/724 (26%), Positives = 342/724 (47%), Gaps = 99/724 (13%)
Query: 18 RCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFV 77
R G +E R+ + + G +F L++ + GA +A + +G+ ++ F
Sbjct: 7 RLGALEAGKRIHRHSVECGMGKNRFVENLLIN---MYGKCGALEEARKILDGMEDSNVFS 63
Query: 78 GTALLGLYGRHGCLDEVVSVFE-DMPRKSLVTWNSIVSIFGKH-GFVEDCMFLFCELVRS 135
T +L Y ++G LD VF+ ++ +V+WNS++S ++ ++ LF ++
Sbjct: 64 WTIMLAAYAQNG-LDSAKRVFDLSHAKRDVVSWNSMLSTCSQNEQGIQGTWELFQQMDLE 122
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
+FV ++ ++ DL G Q+H + +G D VAN +VNMY +C + A
Sbjct: 123 GFQPDRVTFVTLLDCCASFADLRRGRQVHQCAVASGMDLLPTVANCVVNMYGKCDDLEEA 182
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
++F+ ++ ++ +SW++++ A A++ +A++L+ M ++ + P++ T + V+++C L
Sbjct: 183 RRVFESLKRKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDL 242
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK--NIVSWNA 313
+ S IHA+V++ LE DV V +ALV Y K LE A + F + K ++++WNA
Sbjct: 243 RASKQSSQIHARVLEADLERDVVVANALVSMYGKLGRLEQATVIFETMGEKSRDVIAWNA 302
Query: 314 LILGYASKSSPTSIFLL--IELLQLGYRPNEFTFSHVLRSSLAF-QLLQLHCLIIRMGYE 370
+I YA T F + I LL+ P+ T S +L + L ++HCL +G E
Sbjct: 303 MISAYAHTGHHTRAFGIFRIMLLEAAVTPSAATISAILAACLDLGSGRRIHCLAASIGVE 362
Query: 371 NYEYVLGSLMTSY--------------------------------AKSGLISDALAFVTA 398
++ V SL+ Y A+ GL ++A A
Sbjct: 363 SHPSVAISLLGMYSRCSSSITSARALFLGMERKSLVAWNTMIAACAQRGLAAEAQELFKA 422
Query: 399 LNI-PRAVVPANIIA-------------------------------GIYNRTGQYNETVK 426
+++ P A+++A G+Y+R G +
Sbjct: 423 MDVEPDGFTFASLLAVCCDLDLGRRLHAGIATARLASRLIVDTALVGMYSRCGSLGDAAA 482
Query: 427 LLSQLER-------------------PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+ +E D VSWN +I+A AH+G YK+ + + RA
Sbjct: 483 VFEGMEDRDTCGSLGDAKLVFDRIPDKDAVSWNSMISAYAHHGRYKDAIATY---RAMDC 539
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD T VS L+A S L +L G+++H + E+ + V + L M+ KCGS+ +++
Sbjct: 540 RPDEATIVSALAAASALADLDEGAAIHA--RALELGIATPAVESTLASMHAKCGSLDAAM 597
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+F + ++++++W A+++A +G AL ME G P+ V L VL +C H G
Sbjct: 598 ALFEKNREKDLVSWNAMVAAYAQHGDGSEALALIHRMELEGISPNGVTLSGVLASCSHAG 657
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
L+ GM ++R +GV E +HY VV+LL R G L EAE ++ MP P +W T
Sbjct: 658 LLERGMFYVGWLSREHGVAVESEHYRFVVELLGRCGRLGEAEAVVRGMPLEPEPALWVTL 717
Query: 648 LEGC 651
+ C
Sbjct: 718 VAAC 721
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 35/204 (17%)
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+L C +L L G +H + + + FV N+LI+MYGKCG++ + KI + M D
Sbjct: 1 MLDWCVRLGALEAGKRIHRHSVECGM-GKNRFVENLLINMYGKCGALEEARKILDGMEDS 59
Query: 537 NVITWTALISALGLNGFA--------------------------------QRALEKFREM 564
NV +WT +++A NG Q E F++M
Sbjct: 60 NVFSWTIMLAAYAQNGLDSAKRVFDLSHAKRDVVSWNSMLSTCSQNEQGIQGTWELFQQM 119
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
+ GF+PDRV + +L C +R G ++ + S G++ +CVV++ +
Sbjct: 120 DLEGFQPDRVTFVTLLDCCASFADLRRGRQVHQCAVAS-GMDLLPTVANCVVNMYGKCDD 178
Query: 625 LKEAEKIITTMPFPPNALIWRTFL 648
L+EA ++ ++ N + W + +
Sbjct: 179 LEEARRVFESLK-RKNEISWSSLV 201
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 5/228 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
+PD++ VS+NS+ISAY+ G +DA+ + M R E T + + EGA
Sbjct: 506 IPDKDAVSWNSMISAYAHHGRYKDAIATYRAMDCRPDEAT-IVSALAAASALADLDEGAA 564
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ A L+ G+ A V + L ++ + G LD +++FE K LV+WN++V+ + +HG
Sbjct: 565 IHARALELGI--ATPAVESTLASMHAKCGSLDAAMALFEKNREKDLVSWNAMVAAYAQHG 622
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHG-LVIKNGFDYELLVA 179
+ + L + ++ + GV+ S+ LE G G L ++G E
Sbjct: 623 DGSEALALIHRMELEGISPNGVTLSGVLASCSHAGLLERGMFYVGWLSREHGVAVESEHY 682
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKA 226
+V + +C + AE + + + + + W T++ A E +A
Sbjct: 683 RFVVELLGRCGRLGEAEAVVRGMPLEPEPALWVTLVAACVLHEEVSRA 730
>gi|449453244|ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Cucumis sativus]
Length = 735
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 155/583 (26%), Positives = 295/583 (50%), Gaps = 42/583 (7%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D + T LL + G ++ +F+ MP+ ++ WN++++ + G M F E+
Sbjct: 125 DVYSWTTLLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMH 184
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
+ V SF ++ L ++ + G Q+H VIK G+ + V N+L+ MYF +
Sbjct: 185 KMGVKPDNYSFACIL-SLCTKEIEDLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLE 243
Query: 194 SAEKMFK--DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
A ++F+ + E+RD +++N +I L +AL ++ M + P + TFV +++S
Sbjct: 244 DAYEVFEGTESEVRDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMSS 303
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
C+ +Q + + +H++ IK E VG++ + Y C + A+ F + K+++SW
Sbjct: 304 CSIIQ---VAQQVHSQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLISW 360
Query: 312 NALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL-HCLIIRMGY 369
NA+I Y + +++ +++ + G P+EFTF +L S +++++ H + + G
Sbjct: 361 NAIISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIEIVEMVHAYVYKNGL 420
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
+L +L+++YAK + +L ++ S
Sbjct: 421 ILIIEILNALVSAYAKCRKVKQSL--------------------------------QVFS 448
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
++ +I+SWN VI NG + LE F + +++ P +T +LS C+ + L +
Sbjct: 449 EINSKNIISWNTVIYGFLLNGLPLQALEHFSKLIMSKLKPSTFTLSIVLSICANISTLDI 508
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G +HG I ++ SS+T +CN LI MY KCG +G S++ FN M +R++++W ++ISA
Sbjct: 509 GKQIHGYILRSGN-SSETSLCNGLITMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYA 567
Query: 550 LNGFAQRALEKFREMEFL-GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
+G + A++ F+ M+ + PD+ +L+AC H GLV E ++ + M Y P
Sbjct: 568 QHGQGKEAVDCFKAMQDMPSIMPDQATFTTILSACSHAGLVEEACQILDIMLIDYRAVPS 627
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+D C+VDL+ R G++ +AE +I + + + +W C
Sbjct: 628 VDQLSCIVDLIGRSGYIDQAESVIESAQYGEHTHVWWALFSAC 670
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 132/572 (23%), Positives = 243/572 (42%), Gaps = 112/572 (19%)
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
+N +D+ FG Q+HG I++G + VAN+++++Y + S ++ F+++E DV SW
Sbjct: 71 ANFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYSWT 130
Query: 212 TIIGALAE-------SENFG------------------------KALELYLRMSVDIVFP 240
T++ A + SE F A+ + M V P
Sbjct: 131 TLLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMGVKP 190
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ +F +++ C + LG+ +H+ VIK V +AL+ Y +NLE A+ F
Sbjct: 191 DNYSFACILSLCTK-EIEDLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEVF 249
Query: 301 --SEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
+E ++ +++N +I G + + ++ + ++ + P E TF ++ S Q+
Sbjct: 250 EGTESEVRDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMSSCSIIQV 309
Query: 358 L-QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
Q+H I++G+E++ V S +T +Y
Sbjct: 310 AQQVHSQAIKLGFESFTLVGNSTIT--------------------------------MYT 337
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
G++ + L D++SWN +I++ K + F M+ I PD +TF S
Sbjct: 338 SCGEFQAANAVFQMLIEKDLISWNAIISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGS 397
Query: 477 LLSACSKLCNLALGSSL---HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
LL + + + + +GLI EI+ N L+ Y KC + S+++F+E+
Sbjct: 398 LLGVSEFIEIVEMVHAYVYKNGLILIIEIL-------NALVSAYAKCRKVKQSLQVFSEI 450
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR--------- 584
+N+I+W +I LNG +ALE F ++ KP L VL+ C
Sbjct: 451 NSKNIISWNTVIYGFLLNGLPLQALEHFSKLIMSKLKPSTFTLSIVLSICANISTLDIGK 510
Query: 585 --HGGLVREG-----------MELFERMN------RSYGVEPEMD--HYHCVVDLLVRYG 623
HG ++R G + ++ + R++ V E D ++ ++ ++G
Sbjct: 511 QIHGYILRSGNSSETSLCNGLITMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQHG 570
Query: 624 HLKEAE---KIITTMP-FPPNALIWRTFLEGC 651
KEA K + MP P+ + T L C
Sbjct: 571 QGKEAVDCFKAMQDMPSIMPDQATFTTILSAC 602
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 199/402 (49%), Gaps = 12/402 (2%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQA 63
R+ +++N +I E+AL MF M PT+ TF ++S S+ V Q+ +
Sbjct: 257 RDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMSSCSIIQV-AQQVHS 315
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+K G F + VG + + +Y G +VF+ + K L++WN+I+S + + F +
Sbjct: 316 QAIKLG-FESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLISWNAIISSYVQGNFGK 374
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ F ++ R+ + E +F G + G+S + +E E +H V KNG + + N+LV
Sbjct: 375 SAVLAFLQMQRTGIGPDEFTF-GSLLGVS--EFIEIVEMVHAYVYKNGLILIIEILNALV 431
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
+ Y +C + + ++F ++ ++++SWNT+I + +ALE + ++ + + P+
Sbjct: 432 SAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQALEHFSKLIMSKLKPSTF 491
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
T V++ CA + +GK IH ++++ + + + L+ Y+KC L + F+ +
Sbjct: 492 TLSIVLSICANISTLDIGKQIHGYILRSGNSSETSLCNGLITMYSKCGLLGWSLRTFNVM 551
Query: 304 SNKNIVSWNALILGYASKSSPTSIFLLIELLQ--LGYRPNEFTFSHVLRSSLAFQLLQLH 361
++IVSWN++I YA + +Q P++ TF+ +L + L++
Sbjct: 552 IERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMPDQATFTTILSACSHAGLVEEA 611
Query: 362 CLIIRMGYENYEYV-----LGSLMTSYAKSGLISDALAFVTA 398
C I+ + +Y V L ++ +SG I A + + +
Sbjct: 612 CQILDIMLIDYRAVPSVDQLSCIVDLIGRSGYIDQAESVIES 653
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 142/257 (55%), Gaps = 7/257 (2%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVEGAQL 61
+++++S+N+IIS+Y + + + A+ FL M G P +FTFG LL + VE +
Sbjct: 354 EKDLISWNAIISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIEIVE--MV 411
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
A V KNGL + AL+ Y + + + + VF ++ K++++WN+++ F +G
Sbjct: 412 HAYVYKNGLILIIEILN-ALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGL 470
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ F +L+ S++ + + V+ +N L+ G+QIHG ++++G E + N
Sbjct: 471 PLQALEHFSKLIMSKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETSLCNG 530
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS-VDIVFP 240
L+ MY +C + + + F + RD+VSWN+II A A+ +A++ + M + + P
Sbjct: 531 LITMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMP 590
Query: 241 NQTTFVYVINSC--AGL 255
+Q TF ++++C AGL
Sbjct: 591 DQATFTTILSACSHAGL 607
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 173/424 (40%), Gaps = 76/424 (17%)
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF---PNQTTFVYVINSCA 253
K + +D++ +N ++ L S + +L+L+ ++ F P+ + CA
Sbjct: 12 KTIAESASQDLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTTLAVCA 71
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK------- 306
++ G +H I++ L+ V + ++ YAK ++ F EI
Sbjct: 72 NFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYSWTT 131
Query: 307 ------------------------NIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPN 341
N+ WNA+I G A S ++ E+ ++G +P+
Sbjct: 132 LLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMGVKPD 191
Query: 342 EFTFSHVLRSSLAFQLL-----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
++F+ +L SL + + Q+H +I+ GY V+ +L+T Y + DA
Sbjct: 192 NYSFACIL--SLCTKEIEDLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEVF 249
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
++ E D +++N++I +E L
Sbjct: 250 EG------------------------------TESEVRDQITYNVMIDGLVCVRRNEEAL 279
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
+FK M+ A + P TFVS++S+CS + + +H K S T V N I M
Sbjct: 280 IMFKDMKRACLSPTELTFVSIMSSCSI---IQVAQQVHSQAIKLG-FESFTLVGNSTITM 335
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y CG ++ +F + ++++I+W A+IS+ F + A+ F +M+ G PD
Sbjct: 336 YTSCGEFQAANAVFQMLIEKDLISWNAIISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTF 395
Query: 577 IAVL 580
++L
Sbjct: 396 GSLL 399
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 119/279 (42%), Gaps = 19/279 (6%)
Query: 339 RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAK-SGLISDAL 393
+P+ + S L F+ + QLH IR G + Y +V ++++ YAK +S
Sbjct: 57 KPDHYNLSTTLAVCANFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKR 116
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
F + P +++ + G ++ + + ++ WN +I A +G
Sbjct: 117 GF-QEIEKPDVYSWTTLLSAC-TKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDW 174
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
+ F M + PDNY+F +LS C+K LG +H + K + T V N L
Sbjct: 175 VAMNTFYEMHKMGVKPDNYSFACILSLCTKEIE-DLGRQVHSSVIKAGYL-RKTSVVNAL 232
Query: 514 IDMYGKCGSIGSSVKIF--NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
I MY ++ + ++F E R+ IT+ +I L + AL F++M+ P
Sbjct: 233 ITMYFSIENLEDAYEVFEGTESEVRDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSP 292
Query: 572 DRVALIAVLTACR--------HGGLVREGMELFERMNRS 602
+ ++++++C H ++ G E F + S
Sbjct: 293 TELTFVSIMSSCSIIQVAQQVHSQAIKLGFESFTLVGNS 331
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 33/193 (17%)
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR---IYPDNYTFVSLLSA 480
++K +++ D++ +N ++A + Y + L+LF + ++ I PD+Y + L+
Sbjct: 10 SLKTIAESASQDLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTTLAV 69
Query: 481 CSKLCNLALGSSLHGLIKKT------------------------------EIISSDTFVC 510
C+ ++A GS LHG ++ EI D +
Sbjct: 70 CANFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYSW 129
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
L+ K G I + ++F+ M NV W A+I+ +G A+ F EM +G K
Sbjct: 130 TTLLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMGVK 189
Query: 571 PDRVALIAVLTAC 583
PD + +L+ C
Sbjct: 190 PDNYSFACILSLC 202
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLLS-CDSLNPVEG 58
M +R++VS+NSIISAY++ G ++A+ F M + P Q TF +LS C VE
Sbjct: 551 MIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMPDQATFTTILSACSHAGLVEE 610
Query: 59 A-QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
A Q+ +L + + ++ L GR G +D+ SV E +G
Sbjct: 611 ACQILDIMLIDYRAVPSVDQLSCIVDLIGRSGYIDQAESVIESAQ-------------YG 657
Query: 118 KHGFVEDCMFLFC 130
+H V +F C
Sbjct: 658 EHTHVWWALFSAC 670
>gi|302768233|ref|XP_002967536.1| hypothetical protein SELMODRAFT_87961 [Selaginella moellendorffii]
gi|300164274|gb|EFJ30883.1| hypothetical protein SELMODRAFT_87961 [Selaginella moellendorffii]
Length = 751
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 179/670 (26%), Positives = 324/670 (48%), Gaps = 54/670 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF--GGLLSCDSLNPVEGAQLQ 62
+V+S++ +I+A SR G AL + M+ G P + T + S P EG +
Sbjct: 80 DVISWSCLIAANSRNGDSRAALSLLRSMLLHGVPPNKITLISAATAAAHSKIPAEGEFVH 139
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
L+ G + D + +ALL +YG++G L+ + ++FE + ++ ++W ++++ K G +
Sbjct: 140 DLALQGG-WIRDLALSSALLNMYGKYGLLNRMEAIFEQIEERNPISWTAVIAANTKSGDL 198
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE--LLVAN 180
+ LF ++ V + + + + S ++ +IH L+ ++GFD L++AN
Sbjct: 199 PRALELFSAMLLDGVLPDAVTLLTMANACSRMGSIQAARRIHRLIEESGFDRSRALMLAN 258
Query: 181 SLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
++++MY +C A F + IRD VSWN++IGALA + +A+ ++ RM +D +
Sbjct: 259 AIIDMYGECGSTSCARAAFDSMAMIRDDVSWNSMIGALARNGEAIEAIVIFHRMLLDGIH 318
Query: 240 PNQTTFVYVINSCAGLQNSILGKS----IHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
P + TF+ ++++ + +S+ +H ++ LECD + + L+ A+ + LE
Sbjct: 319 PTKVTFLEILHAFSQSHSSLTAHRSIELVHGQIQSRGLECDALIAAGLIPTLARINRLEE 378
Query: 296 AHLCFSEISN-KNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS-- 351
A F + ++V W +I YA K P + L G+ N ++ VL S
Sbjct: 379 ATRIFHGARDCHDVVLWTTIIAAYAQKDRPREAMAFFRRMLLEGFLANGYSIVAVLESCC 438
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
S+A +L C M S +S L P V+ N +
Sbjct: 439 SIADGILLESC--------------AREMISRGRSSL-------------PMDVIVENSL 471
Query: 412 AGIYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+++R G +T ++ S + ER D VSWN +I A + + E L +++ M + P+
Sbjct: 472 LSMFSRCGSIEDTSRIFSGMDERQDTVSWNSMIVALSQHDRPGEALAIYRKMLLHGVGPE 531
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS--------SDTFVCNMLIDMYGKCGS 522
TFV+ L ACSK + GS+ EI + SDT V ++ ++GK G
Sbjct: 532 KITFVAALDACSKSSD---GSAPADRAASLEICALILEAGHGSDTAVGAAMVAIHGKHGE 588
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+++ + + +++ W+A++SA + A+ FREM G + + V + VL+A
Sbjct: 589 FDRAMECMDGIHKKDIFAWSAMVSAYAQHERCVEAIGFFREMVLDGVEANDVIFVTVLSA 648
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
H G + E F + +G+ P + HY CV+D+L R GHL EA ++ MP + +
Sbjct: 649 LGHAGSIEECCRYFGGLEVEFGMRPSLPHYGCVIDMLSRAGHLAEAVSVMEQMP-SQDRV 707
Query: 643 IWRTFLEGCQ 652
W + L GC+
Sbjct: 708 TWMSVLGGCR 717
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/602 (20%), Positives = 270/602 (44%), Gaps = 56/602 (9%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ- 60
+RN +S+ ++I+A ++ G + AL +F M+ G P T + +C + ++ A+
Sbjct: 179 ERNPISWTAVIAANTKSGDLPRALELFSAMLLDGVLPDAVTLLTMANACSRMGSIQAARR 238
Query: 61 LQASVLKNGLFCADAFV-GTALLGLYGRHGCLDEVVSVFEDMPR-KSLVTWNSIVSIFGK 118
+ + ++G + A + A++ +YG G + F+ M + V+WNS++ +
Sbjct: 239 IHRLIEESGFDRSRALMLANAIIDMYGECGSTSCARAAFDSMAMIRDDVSWNSMIGALAR 298
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG----EQIHGLVIKNGFDY 174
+G + + +F ++ + T+ +F+ ++H S E +HG + G +
Sbjct: 299 NGEAIEAIVIFHRMLLDGIHPTKVTFLEILHAFSQSHSSLTAHRSIELVHGQIQSRGLEC 358
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ L+A L+ + + A ++F + DVV W TII A A+ + +A+ + RM
Sbjct: 359 DALIAAGLIPTLARINRLEEATRIFHGARDCHDVVLWTTIIAAYAQKDRPREAMAFFRRM 418
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI---KNALECDVFVGSALVDFYAKC 290
++ N + V V+ SC + + IL +S ++I +++L DV V ++L+ +++C
Sbjct: 419 LLEGFLANGYSIVAVLESCCSIADGILLESCAREMISRGRSSLPMDVIVENSLLSMFSRC 478
Query: 291 DNLEGAHLCFSEISNK-NIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHV 348
++E FS + + + VSWN++I+ + P ++ + ++L G P + TF
Sbjct: 479 GSIEDTSRIFSGMDERQDTVSWNSMIVALSQHDRPGEALAIYRKMLLHGVGPEKITFVAA 538
Query: 349 LR--------SSLAFQLLQLH-CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
L S+ A + L C +I + +G+ M +
Sbjct: 539 LDACSKSSDGSAPADRAASLEICALILEAGHGSDTAVGAAMVA----------------- 581
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
I+ + G+++ ++ + + + DI +W+ +++A A + E + F
Sbjct: 582 --------------IHGKHGEFDRAMECMDGIHKKDIFAWSAMVSAYAQHERCVEAIGFF 627
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
+ M + ++ FV++LSA ++ G ++ + +IDM +
Sbjct: 628 REMVLDGVEANDVIFVTVLSALGHAGSIEECCRYFGGLEVEFGMRPSLPHYGCVIDMLSR 687
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
G + +V + +M ++ +TW +++ L G Q+ + R + +G PD +
Sbjct: 688 AGHLAEAVSVMEQMPSQDRVTWMSVLGGCRLYGDPQQGNKMARTL--IGSNPDNASAYVA 745
Query: 580 LT 581
LT
Sbjct: 746 LT 747
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 110/239 (46%), Gaps = 3/239 (1%)
Query: 417 RTGQYNETVKLL-SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
R G E + L + R D++SW+ +IAA + NGD + L L + M + P+ T +
Sbjct: 61 RDGALEEALNLFQATAHRWDVISWSCLIAANSRNGDSRAALSLLRSMLLHGVPPNKITLI 120
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S +A + A G +H L + I D + + L++MYGK G + IF ++ +
Sbjct: 121 SAATAAAHSKIPAEGEFVHDLALQGGWI-RDLALSSALLNMYGKYGLLNRMEAIFEQIEE 179
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
RN I+WTA+I+A +G RALE F M G PD V L+ + AC G ++ +
Sbjct: 180 RNPISWTAVIAANTKSGDLPRALELFSAMLLDGVLPDAVTLLTMANACSRMGSIQAARRI 239
Query: 596 FERMNRS-YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ S + + + ++D+ G A +M + + W + + R
Sbjct: 240 HRLIEESGFDRSRALMLANAIIDMYGECGSTSCARAAFDSMAMIRDDVSWNSMIGALAR 298
>gi|125578267|gb|EAZ19413.1| hypothetical protein OsJ_34968 [Oryza sativa Japonica Group]
Length = 786
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 172/585 (29%), Positives = 287/585 (49%), Gaps = 53/585 (9%)
Query: 85 YGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
Y R G LD + VF++MP ++LV+W ++VS ++G F ++RS E S
Sbjct: 32 YARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFSL 91
Query: 145 VGVI---HGLSNEQDLEFG--EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
++ H ++ ++G Q+H LVI + + V NSLV+MYF+ +A +F
Sbjct: 92 ATMLTACHSMACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVF 151
Query: 200 KDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
+ + +D VSWNT+ A E+ + MS PN+ TF ++ +N+
Sbjct: 152 RKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENAS 211
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
LG I A ++ +V V +A+++ +C L+ A+ F ++ +NIV+WN +I GY
Sbjct: 212 LGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYG 271
Query: 320 SKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-------QLHCLIIRMGYEN 371
S S ++ L L+ +G RP+EFT+S VL AFQ Q+H +I++ G+ +
Sbjct: 272 LFSHSEDAMRLFRSLVCIGERPDEFTYSAVLS---AFQEAHGARDHEQIHAIILKQGFAS 328
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
++V SL+ + +A AF G ++K++
Sbjct: 329 CQFVSTSLIKA--------NAAAF-----------------------GSVQSSLKIIEDS 357
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI-YPDNYTFVSLLSACSKLCNLALG 490
+ ++VSW +I+A +G EV+ LF R PD + ++L+AC+ +
Sbjct: 358 GKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALIRHC 417
Query: 491 SSLHGLIKKTEIISSDTF-VCNMLIDMYGKCGSIGSSVKIFNEMTD--RNVITWTALISA 547
+H L+ KT S+ F V + ++D Y KCG I S+ F ++ + I + +++A
Sbjct: 418 RCIHSLVLKTG--HSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTA 475
Query: 548 LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
+G AL + EM P +A+L+AC H GLV +G F M +YG+ P
Sbjct: 476 YANHGLIHEALNLYEEMTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHP 535
Query: 608 EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+Y C+VDLL R G L EA+ +I MPF P +WR+ + GC+
Sbjct: 536 ARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCR 580
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 140/578 (24%), Positives = 265/578 (45%), Gaps = 62/578 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL------ 53
MP RN+VS+ +++SA +R G R F+ MI GF P +F+ +L+ C S+
Sbjct: 48 MPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFSLATMLTACHSMACSISA 107
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
G QL V+ + + ++ V +L+ +Y R + SVF + +K V+WN++
Sbjct: 108 QWGLGRQLHCLVI-HSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMF 166
Query: 114 SIFGKHGFVEDCMFLF-CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
S F H + +F + ++ R+ E +F ++ +++ G QI L ++G+
Sbjct: 167 SGFA-HDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGY 225
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+LVAN+++NM F+C + A F + R++V+WN II + A+ L+
Sbjct: 226 TDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRS 285
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ P++ T+ V+++ + + IHA ++K FV ++L+ A
Sbjct: 286 LVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFG 345
Query: 293 LEGAHLCFSEISNK-NIVSWNALILGYASKSSPTSIFLLIELLQ--LGYRPNEFTFSHVL 349
+ L E S K +VSW A+I + + L L + +P+EF + VL
Sbjct: 346 SVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVL 405
Query: 350 RSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+ L++ +H L+++ G+ N+ V +++ +YAK G I+ A + TA
Sbjct: 406 NACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTA------- 458
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
++ N D + +N ++ A A++G E L L++ M A
Sbjct: 459 -----VSSATN------------------DAIMYNTMLTAYANHGLIHEALNLYEEMTKA 495
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS-------DTFVCNMLIDMYG 518
++ P TFV++LSACS LG G + + ++S+ + C L+D+
Sbjct: 496 KLNPTPATFVAILSACSH-----LGLVEQGKLAFSTMLSAYGMHPARANYAC--LVDLLA 548
Query: 519 KCGSIGSSVKIFNEMTDRN-VITWTALISALGLNGFAQ 555
+ G + + + + M + W +L++ ++G Q
Sbjct: 549 RKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNKQ 586
>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 174/606 (28%), Positives = 297/606 (49%), Gaps = 34/606 (5%)
Query: 52 SLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP--RKSLVTW 109
S N V G + +LK L + + V L LY ++ VF+++P R + + W
Sbjct: 12 SRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAW 71
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
+ ++ + + F E + L+ +++ S V T+ ++ V+ + + ++ G+ IH V
Sbjct: 72 DLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNC 131
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
+ F ++ V +LV+ Y +C + A K+F ++ RD+V+WN +I + + L
Sbjct: 132 SDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGL 191
Query: 230 YLRMS-VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
+L M +D + PN +T V + + GK++H + D+ V + ++D YA
Sbjct: 192 FLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYA 251
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
K + A F KN V+W+A+I GY E+++ E F +
Sbjct: 252 KSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN----------EMIK---EAGEVFFQML 298
Query: 349 LRSSLAFQLLQLHCLIIRMGYENY-EYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVV 406
+ ++A + + +I MG + + G + YA K+G I D +
Sbjct: 299 VNDNVAM-VTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILD-------------LT 344
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
N I Y + G + + S++ D++S+N +I C N +E LF MR +
Sbjct: 345 VQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSG 404
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
I PD T + +L+ACS L L GSS HG + +T +CN L+DMY KCG + +
Sbjct: 405 IRPDITTLLGVLTACSHLAALGHGSSCHGYCV-VHGYAVNTSICNALMDMYTKCGKLDVA 463
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
++F+ M R++++W ++ G++G + AL F M+ G PD V L+A+L+AC H
Sbjct: 464 KRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHS 523
Query: 587 GLVREGMELFERMNR-SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GLV EG +LF M+R + V P +DHY+C+ DLL R G+L EA + MPF P+ +
Sbjct: 524 GLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLG 583
Query: 646 TFLEGC 651
T L C
Sbjct: 584 TLLSAC 589
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 150/586 (25%), Positives = 279/586 (47%), Gaps = 39/586 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ 60
P N ++++ +I AY+ + E AL ++ M+N G PT++T+ +L +C L ++ +
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L S + F D +V TAL+ Y + G L+ + VF++MP++ +V WN+++S F H
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 121 FVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ D + LF ++ R + ++ S+ VG+ L L G+ +HG + GF +L+V
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV--DI 237
++++Y + I A ++F ++ V+W+ +IG E+E +A E++ +M V ++
Sbjct: 244 TGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNV 303
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
++ CA + G+ +H +K D+ V + ++ FYAK +L A
Sbjct: 304 AMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAF 363
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQ 356
FSEI K+++S+N+LI G P F L E+ G RP+ T VL +
Sbjct: 364 RQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTAC---- 419
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
H + G + Y ++ YA + I +AL +Y
Sbjct: 420 ---SHLAALGHGSSCHGYC---VVHGYAVNTSICNAL------------------MDMYT 455
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G+ + ++ + + DIVSWN ++ +G KE L LF M+ + PD T ++
Sbjct: 456 KCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLA 515
Query: 477 LLSACSKLCNLALGSSLHGLIKKTE---IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+LSACS + G L + + + I D + C + D+ + G + + N+M
Sbjct: 516 ILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNC--MTDLLARAGYLDEAYDFVNKM 573
Query: 534 T-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
+ ++ L+SA A+ E ++M+ LG + + L++
Sbjct: 574 PFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESLVLLS 619
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 207/464 (44%), Gaps = 56/464 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLLSCDSLNPV--E 57
MP R++V++N++IS +S + D + +FL M G P T G+ E
Sbjct: 164 MPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALRE 223
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + + G F D V T +L +Y + C+ VF+ +K+ VTW++++
Sbjct: 224 GKAVHGYCTRMG-FSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIG--- 279
Query: 118 KHGFVEDCMF------LFCELVRSEVALTESSFVGVI-HGLSNEQDLEFGEQIHGLVIKN 170
G+VE+ M F LV VA+ +G+I G + DL G +H +K
Sbjct: 280 --GYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKA 337
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
GF +L V N++++ Y + + A + F ++ ++DV+S+N++I + ++ L+
Sbjct: 338 GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLF 397
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
M + P+ TT + V+ +C+ L G S H + + + + +AL+D Y KC
Sbjct: 398 HEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKC 457
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL 349
L+ A F + ++IVSWN ++ G+ ++ L + + G P+E T
Sbjct: 458 GKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVT----- 512
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN------IPR 403
L +++++ + SGL+ + +++ IPR
Sbjct: 513 --------------------------LLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPR 546
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
+ N + + R G +E ++++ PDI +++AC
Sbjct: 547 -IDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSAC 589
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 188/424 (44%), Gaps = 58/424 (13%)
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNAL---ECDVFVGSALVDFYAKCDNLEGAHLCFS 301
F+ ++ +C +N +LG+ IH ++K +L V V L YA C+ +E A F
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN--LTRLYASCNEVELARHVFD 59
Query: 302 EISNKNI--VSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
EI + I ++W+ +I YAS + ++ L ++L G RP ++T+ VL++ + +
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
G L+ S+ SD F T + + A+V Y +
Sbjct: 120 D----------------DGKLIHSHVNC---SD---FATDMYVCTALVD------FYAKC 151
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR-IYPDNYTFVSL 477
G+ +K+ ++ + D+V+WN +I+ + + +V+ LF MR + P+ T V +
Sbjct: 152 GELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGM 211
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
A + L G ++HG + S+D V ++D+Y K I + ++F+ +N
Sbjct: 212 FPALGRAGALREGKAVHGYCTRMG-FSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKN 270
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA------VLTACRHGGLVRE 591
+TW+A+I N + A E F +M D VA++ +L C G +
Sbjct: 271 EVTWSAMIGGYVENEMIKEAGEVFFQM----LVNDNVAMVTPVAIGLILMGCARFGDLSG 326
Query: 592 GMELFERMNRSYGVEP----EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
G R Y V+ ++ + ++ +YG L +A + + + + + + +
Sbjct: 327 G-----RCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGL-KDVISYNSL 380
Query: 648 LEGC 651
+ GC
Sbjct: 381 ITGC 384
>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
Length = 1167
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 182/643 (28%), Positives = 301/643 (46%), Gaps = 74/643 (11%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQ 60
++NVV +NS+ISAY++ +A +MF M+ +P TF ++ C +S N G
Sbjct: 509 EKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKS 568
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L A V+K L + V TALL +Y + G + +F MPRK+ +S++S +G
Sbjct: 569 LHAHVMKYRL-DSQLSVATALLSMYAKLGDXNSAXFIFYQMPRKTSYR-DSMISGYGIMS 626
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG--FDYELLV 178
F + L+ +H L IK G FD L +
Sbjct: 627 MGRP--FFWVRLL-----------------------------MH-LAIKTGKEFDSXLNI 654
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N+L+ Y C + S+ K+F+ + +R+ +SWNT+I + + KA+ L +M + +
Sbjct: 655 SNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKM 714
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ T + +I C +N I G ++H IK CDV + +AL+ Y C ++
Sbjct: 715 ELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKF 774
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFL-LIELLQLGYRPNEFTFSHVLRSSLAF-Q 356
F + ++IVSWNALI GY + +++ G +PN T ++L S Q
Sbjct: 775 LFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIXEGQKPNYVTLLNLLPSCXTLLQ 834
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
+H +R G ++ SL++ YA
Sbjct: 835 GKSIHAFAVRTGVIVETPIITSLISMYA-------------------------------- 862
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
R N + L + DI WN +++ + KE + F + AR+ PD TF+S
Sbjct: 863 RFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLS 922
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
L+SAC +L +L L +S+ + + + N LID++ +CG+I + KIF ++ +
Sbjct: 923 LISACVQLSSLNLSNSVMAYVIQKGF-DKHIVISNALIDLFARCGNISIAKKIFEGLSSK 981
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+ ++W+ +I+ GL+G ++ AL +M G KPD + +VL+AC HGG + +G +F
Sbjct: 982 DAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIF 1041
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
M GV M+HY C+VDLL R G L EA + +P P
Sbjct: 1042 NSMVEE-GVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKP 1083
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/565 (26%), Positives = 264/565 (46%), Gaps = 60/565 (10%)
Query: 20 GYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQASVLKNGLFCADAFVG 78
G ED L ++L G FTF ++ +C +L V A+ ++ F + +
Sbjct: 324 GLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSALGAVWIAEGVHCIVLRTAFEENLVIQ 383
Query: 79 TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVA 138
TAL+ Y + G + + V + + + LVTWN+++S + +GF ++ + +++ +
Sbjct: 384 TALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQILEMGLK 443
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
S+F +I + + L+ G+ IHG V+K+GF + + +L++MY ++ A +
Sbjct: 444 PNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDL 503
Query: 199 FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
F ++VV WN++I A A+++ +A +++ +M + PN TFV +I C N
Sbjct: 504 FDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANF 563
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
GKS+HA V+K L+ + V +AL+ YAK + A F ++ K +++I GY
Sbjct: 564 WXGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMPRKTSYR-DSMISGY 622
Query: 319 ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS 378
++ +G RP F + L L I+ G E
Sbjct: 623 G-------------IMSMG-RP-------------FFWVRLLMHLAIKTGKE-------- 647
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
F + LNI +N + Y+ G+ + + KL ++ + +S
Sbjct: 648 ----------------FDSXLNI------SNALLAFYSDCGKLSSSFKLFQKMPLRNAIS 685
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
WN +I+ C HNGD K+ + L M+ ++ D T +S++ C NL G +LHG
Sbjct: 686 WNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAI 745
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
KT + D + N LI MY CG I + +F M R++++W ALI+ + +
Sbjct: 746 KTG-FACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVM 804
Query: 559 EKFREMEFLGFKPDRVALIAVLTAC 583
F +M G KP+ V L+ +L +C
Sbjct: 805 ASFCQMIXEGQKPNYVTLLNLLPSC 829
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 212/457 (46%), Gaps = 36/457 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
MP RN +S+N++IS G + A+ + M E T ++ + N ++G
Sbjct: 678 MPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQG 737
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L +K G C D + AL+ +Y G ++ +FE MP +S+V+WN++++ +
Sbjct: 738 MTLHGYAIKTGFAC-DVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRF 796
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
H + M FC+++ + ++V +++ L + L G+ IH ++ G E +
Sbjct: 797 HYLQNEVMASFCQMIXEG---QKPNYVTLLNLLPSCXTLLQGKSIHAFAVRTGVIVETPI 853
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SL++MY + I S +F+ D+ WN I+ +++N +++ + + V
Sbjct: 854 ITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARV 913
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ TF+ +I++C L + L S+ A VI+ + + + +AL+D +A+C N+ A
Sbjct: 914 EPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKK 973
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F +S+K+ VSW+ +I GY + L+ ++L G +P+ T++ VL +
Sbjct: 974 IFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSAC----- 1028
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
H I G+ + S + G +PR + + + R
Sbjct: 1029 --SHGGFIDQGW--------MIFNSMVEEG-------------VPRRMEHYACMVDLLGR 1065
Query: 418 TGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYK 453
TGQ NE + +L +P + ++ AC +G+ K
Sbjct: 1066 TGQLNEAYDFVEKLPCKPSVSLLESLLXACIIHGNVK 1102
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 145/657 (22%), Positives = 276/657 (42%), Gaps = 81/657 (12%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GA 59
PD +V++N++IS YS G+ ++ + ++ G +P TF ++ C + ++ G
Sbjct: 409 PD--LVTWNALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGK 466
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ V+K+G F +D F+ AL+ +Y G L +F+ K++V WNS++S + ++
Sbjct: 467 SIHGFVVKSG-FSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQN 525
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ +F +++++ + +FV +I N + G+ +H V+K D +L VA
Sbjct: 526 QKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSVA 585
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+L++MY + SA +F + + + I G S G+ ++R+ + +
Sbjct: 586 TALLSMYAKLGDXNSAXFIFYQMPRKTSYRDSMISGYGIMS--MGRPF-FWVRLLMHLAI 642
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
F +N + +AL+ FY+ C L +
Sbjct: 643 KTGKEFDSXLN----------------------------ISNALLAFYSDCGKLSSSFKL 674
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
F ++ +N +SWN LI G L+ +Q + + L+
Sbjct: 675 FQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQ--------------QEKMELDLVT 720
Query: 360 LHCLI-IRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
L +I I EN + G + YA K+G D V N + +Y
Sbjct: 721 LISIIPICRVXEN--LIQGMTLHGYAIKTGFACD-------------VSLVNALISMYFN 765
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G N L + IVSWN +I + EV+ F M P+ T ++L
Sbjct: 766 CGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIXEGQKPNYVTLLNL 825
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L +C L G S+H +T +I +T + LI MY + +I S + +F +
Sbjct: 826 LPSCXTLLQ---GKSIHAFAVRTGVI-VETPIITSLISMYARFENINSFIFLFEMGGKED 881
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+ W A++S A+ ++ F E+ +PD + +++++AC + +
Sbjct: 882 IALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVM- 940
Query: 598 RMNRSYGVEPEMDHY----HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+Y ++ D + + ++DL R G++ A+KI + +A+ W T + G
Sbjct: 941 ----AYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLS-SKDAVSWSTMING 992
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 183/405 (45%), Gaps = 48/405 (11%)
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P T+F+ + + C ++N K + + +I L D +V + +F C +L L
Sbjct: 245 PKVTSFLRLFDLCRNIENL---KPLGSVLIVRDLMRDEYV---VAEFIISCFHLGAPELA 298
Query: 300 ---FSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF 355
F I ++ N +I + + ++ LG ++FTF V+++ A
Sbjct: 299 LSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSAL 358
Query: 356 QLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ + HC+++R +E + +L+ YAK+G +V A ++
Sbjct: 359 GAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTG----------------RMVKARLV 402
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
L ++ +PD+V+WN +I+ + NG KEV E+ + + + P+
Sbjct: 403 ----------------LDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQILEMGLKPNV 446
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF S++ C+++ L +G S+HG + K+ SSD F+ LI MY G++ + +F+
Sbjct: 447 STFASIIPLCTRMKCLDIGKSIHGFVVKSG-FSSDEFLTPALISMYAGGGNLFIARDLFD 505
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
++NV+ W ++ISA N + A + F++M +P+ V ++++ C +
Sbjct: 506 SAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWX 565
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
G L + + Y ++ ++ ++ + + G A I MP
Sbjct: 566 GKSLHAHVMK-YRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMP 609
>gi|242077664|ref|XP_002448768.1| hypothetical protein SORBIDRAFT_06g032835 [Sorghum bicolor]
gi|241939951|gb|EES13096.1| hypothetical protein SORBIDRAFT_06g032835 [Sorghum bicolor]
Length = 598
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 156/481 (32%), Positives = 243/481 (50%), Gaps = 42/481 (8%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L+ YF+C ++ ++ R+ VSW+ I LA+ AL L++RM +
Sbjct: 81 NHLLIAYFKCRLHRRGLRVLDEMPHRNAVSWSAAIAGLAQGGRPRDALALFIRMRLAGCP 140
Query: 240 PNQTTFVYVINSCA-GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+ +N+ + + + ++A ++ + VF+ +A + A+ LE A
Sbjct: 141 PNEFALASALNASSFAPAGTGCARQLYALSVRLGFDSSVFLTNAFLAAMARHGQLEDAVR 200
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL- 357
F+ S ++IVSWN L+ G+A S L +++ R + F+FS VL S LA
Sbjct: 201 LFNGSSVRDIVSWNTLLAGFARHWSVQGWILWRRMVREAVRADGFSFSTVL-SGLAASTS 259
Query: 358 ----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIA 412
LQ+H +++ G+ + YV SL+ Y KS ++D +AF
Sbjct: 260 LASGLQVHAQLVKSGFGDDVYVGNSLVEMYMKSKCLADGTMAF----------------- 302
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+++ D+VSW + A C H G+ + + + M + P++Y
Sbjct: 303 ----------------AEIRCKDVVSWTGMAAGCLHCGEPSKAIGILSQMMLDGVMPNSY 346
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF + +AC+ L +L G +HG + K SD V N LIDMY KCGS+ + K+F
Sbjct: 347 TFATSANACASLTDLDEGRKVHGYVIKLGD-DSDIGVNNALIDMYAKCGSVACAHKVFQS 405
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
M R VI+WTA+I NG AQ A+E F +M G P+RV +I +L AC GG V EG
Sbjct: 406 MQQRPVISWTAMIMGFAHNGRAQEAVEVFDDMLLKGVAPNRVTMICILYACSQGGFVDEG 465
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M +G++P DHY C+VDLL + GH++EAE++I+ MPFPP L+W+ L C
Sbjct: 466 WIYFNAMEDKFGIQPGEDHYACMVDLLGKAGHIEEAEELISRMPFPPGVLVWQALLGACH 525
Query: 653 R 653
R
Sbjct: 526 R 526
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 211/434 (48%), Gaps = 13/434 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
MP RN VS+++ I+ ++ G DAL +F+ M G P +F L+ S P
Sbjct: 103 MPHRNAVSWSAAIAGLAQGGRPRDALALFIRMRLAGCPPNEFALASALNASSFAPAGTGC 162
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
QL A ++ G F + F+ A L RHG L++ V +F + +V+WN++++ F
Sbjct: 163 ARQLYALSVRLG-FDSSVFLTNAFLAAMARHGQLEDAVRLFNGSSVRDIVSWNTLLAGFA 221
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+H V+ L+ +VR V SF V+ GL+ L G Q+H ++K+GF ++
Sbjct: 222 RHWSVQG-WILWRRMVREAVRADGFSFSTVLSGLAASTSLASGLQVHAQLVKSGFGDDVY 280
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V NSLV MY + + F ++ +DVVSW + KA+ + +M +D
Sbjct: 281 VGNSLVEMYMKSKCLADGTMAFAEIRCKDVVSWTGMAAGCLHCGEPSKAIGILSQMMLDG 340
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN TF N+CA L + G+ +H VIK + D+ V +AL+D YAKC ++ AH
Sbjct: 341 VMPNSYTFATSANACASLTDLDEGRKVHGYVIKLGDDSDIGVNNALIDMYAKCGSVACAH 400
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLR--SSLA 354
F + + ++SW A+I+G+A + ++ + ++L G PN T +L S
Sbjct: 401 KVFQSMQQRPVISWTAMIMGFAHNGRAQEAVEVFDDMLLKGVAPNRVTMICILYACSQGG 460
Query: 355 F---QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
F + + + + G + E ++ K+G I +A ++ + P V+ +
Sbjct: 461 FVDEGWIYFNAMEDKFGIQPGEDHYACMVDLLGKAGHIEEAEELISRMPFPPGVLVWQAL 520
Query: 412 AGIYNRTGQYNETV 425
G +R G NE V
Sbjct: 521 LGACHRHG--NEAV 532
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/511 (23%), Positives = 229/511 (44%), Gaps = 47/511 (9%)
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K G+ F+ LL Y + + V ++MP ++ V+W++ ++ + G D +
Sbjct: 69 KPGVLACHVFLHNHLLIAYFKCRLHRRGLRVLDEMPHRNAVSWSAAIAGLAQGGRPRDAL 128
Query: 127 FLFCELVRSEVALTESSFVGVIHGLS-NEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
LF + + E + ++ S Q++ L ++ GFD + + N+ +
Sbjct: 129 ALFIRMRLAGCPPNEFALASALNASSFAPAGTGCARQLYALSVRLGFDSSVFLTNAFLAA 188
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
+ + A ++F +RD+VSWNT++ A + + L+ RM + V + +F
Sbjct: 189 MARHGQLEDAVRLFNGSSVRDIVSWNTLLAGFARHWSV-QGWILWRRMVREAVRADGFSF 247
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
V++ A + G +HA+++K+ DV+VG++LV+ Y K L + F+EI
Sbjct: 248 STVLSGLAASTSLASGLQVHAQLVKSGFGDDVYVGNSLVEMYMKSKCLADGTMAFAEIRC 307
Query: 306 KNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QL 360
K++VSW + G P+ +I +L +++ G PN +TF+ + + L ++
Sbjct: 308 KDVVSWTGMAAGCLHCGEPSKAIGILSQMMLDGVMPNSYTFATSANACASLTDLDEGRKV 367
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H +I++G ++ V +L+ YAK G ++ A
Sbjct: 368 HGYVIKLGDDSDIGVNNALIDMYAKCGSVACAH--------------------------- 400
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
K+ +++ ++SW +I AHNG +E +E+F M + P+ T + +L A
Sbjct: 401 -----KVFQSMQQRPVISWTAMIMGFAHNGRAQEAVEVFDDMLLKGVAPNRVTMICILYA 455
Query: 481 CSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRN 537
CS+ + G ++ I D + C ++D+ GK G I + ++ + M
Sbjct: 456 CSQGGFVDEGWIYFNAMEDKFGIQPGEDHYAC--MVDLLGKAGHIEEAEELISRMPFPPG 513
Query: 538 VITWTALISALGLNG---FAQRALEKFREME 565
V+ W AL+ A +G +RA E +E
Sbjct: 514 VLVWQALLGACHRHGNEAVGRRAAEHALALE 544
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 9/187 (4%)
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+Y + +LL + L ++LH + K +++ F+ N L+ Y KC +++
Sbjct: 41 SYHYAALLQRSGATADPRLAAALHAALLKPGVLACHVFLHNHLLIAYFKCRLHRRGLRVL 100
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG---- 586
+EM RN ++W+A I+ L G + AL F M G P+ AL + L A
Sbjct: 101 DEMPHRNAVSWSAAIAGLAQGGRPRDALALFIRMRLAGCPPNEFALASALNASSFAPAGT 160
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
G R+ L R+ G + + + + + R+G L++A ++ + + W T
Sbjct: 161 GCARQLYALSVRL----GFDSSVFLTNAFLAAMARHGQLEDAVRLFNGSSV-RDIVSWNT 215
Query: 647 FLEGCQR 653
L G R
Sbjct: 216 LLAGFAR 222
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 158/502 (31%), Positives = 247/502 (49%), Gaps = 9/502 (1%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNM--YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+QIH I G +V ++ + + A +F + + WN +I +
Sbjct: 36 KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYS 95
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
A+ +Y M V P++ T+ +++ G+ +H ++K +VF
Sbjct: 96 RVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVF 155
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLG 337
V +AL+ Y+ + A F S ++V+WN +I GY SK S+ L E+ ++
Sbjct: 156 VQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMR 215
Query: 338 YRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
P+ T VL + + L ++H + + E + +L+ YA G + AL
Sbjct: 216 VLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTAL 275
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
+ + I+ G N GQ ++ D VSW +I +K
Sbjct: 276 GIFDNMKSRDVISWTAIVTGFTN-LGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFK 334
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
EVL LF+ M+AA I PD +T VS+L+AC+ L L LG + I K EI D+FV N L
Sbjct: 335 EVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEI-KIDSFVGNAL 393
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
IDMY CG++ +++IFN M R+ I+WTA+I L +NG+ + AL+ F +M PD
Sbjct: 394 IDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDE 453
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
V I VL AC H G+V +G + F RM +G+EP + HY C+VDLL R GHLKEA ++I
Sbjct: 454 VTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIK 513
Query: 634 TMPFPPNALIWRTFLEGCQRCR 655
MP PN+++W + L C+ R
Sbjct: 514 NMPVKPNSIVWGSLLGACRVHR 535
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 126/525 (24%), Positives = 233/525 (44%), Gaps = 73/525 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--G 58
MP N +N++I YSR G A+ M+ M+ RG P ++T+ LL + + G
Sbjct: 79 MPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCG 138
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+L ++K G F ++ FV AL+ LY G + VF+ + +VTWN ++S + +
Sbjct: 139 RELHDHIVKLG-FSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNR 197
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
++ M LF E+ R V + + V V+ S +DL G+++H V + ++
Sbjct: 198 SKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVL 257
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII------GALAESEN---------- 222
N+L++MY C + +A +F +++ RDV+SW I+ G + + N
Sbjct: 258 ENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDF 317
Query: 223 ---------------FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
F + L L+ M + P++ T V ++ +CA L LG+ I A
Sbjct: 318 VSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAY 377
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTS 326
+ KN ++ D FVG+AL+D Y C N+E A F+ + +++ +SW A+I G A + +
Sbjct: 378 IDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEA 437
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
+ + ++L+ P+E T C+ ++ + S
Sbjct: 438 LDMFSQMLKASITPDEVT-----------------CI--------------GVLCACTHS 466
Query: 387 GLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNI 441
G++ F + + P + + R G E +++ + +P+ + W
Sbjct: 467 GMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGS 526
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
++ AC + D +E+ E+ + + P+N LL CN
Sbjct: 527 LLGACRVHRD-EEMAEM-AAQQILELEPENGAVYVLLCNIYAACN 569
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/548 (21%), Positives = 248/548 (45%), Gaps = 35/548 (6%)
Query: 39 PTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRH--GCLDEVVS 96
P + +C S+ ++ Q+ + + GL ++ V ++ +H G ++
Sbjct: 18 PQTPPLSLIKTCKSMAQLK--QIHSQTICTGLI-SNPIVPAQIIAFCCKHELGDMEYARM 74
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF+ MP + WN+++ + + G + ++CE++ V E ++ ++ + +
Sbjct: 75 VFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTA 134
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
++ G ++H ++K GF + V N+L+++Y + A +F DVV+WN +I
Sbjct: 135 VKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISG 194
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
S+ F ++++L+ M V P+ T V V+++C+ L++ +GK +H V +E
Sbjct: 195 YNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPV 254
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-----------KSSPT 325
+ +AL+D YA C +++ A F + +++++SW A++ G+ + P
Sbjct: 255 RVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPE 314
Query: 326 SIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
F+ + GY + N F ++L L + + E+ + S++T+ A
Sbjct: 315 RDFVSWTAMIDGYLQVNRFK-----------EVLSLFREMQAANIKPDEFTMVSILTACA 363
Query: 385 KSGLISDA---LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
G + A++ I N + +Y G + +++ + + D +SW
Sbjct: 364 HLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTA 423
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
VI A NG +E L++F M A I PD T + +L AC+ + G +
Sbjct: 424 VIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQH 483
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLN---GFAQRA 557
I + ++D+ G+ G + + ++ M + N I W +L+ A ++ A+ A
Sbjct: 484 GIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMA 543
Query: 558 LEKFREME 565
++ E+E
Sbjct: 544 AQQILELE 551
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 207/435 (47%), Gaps = 79/435 (18%)
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD--NLEGAHLC 299
QT + +I +C + K IH++ I L + V + ++ F K + ++E A +
Sbjct: 19 QTPPLSLIKTCKSMAQL---KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMV 75
Query: 300 FSEISNKNIVSWNALILGYASKSSPTS-IFLLIELLQLGYRPNEFTFSHVL----RSSLA 354
F + N WN +I GY+ P S + + E+L+ G P+E+T+ +L R +
Sbjct: 76 FDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAV 135
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+LH I+++G+ + +V +L+ Y+ SG +S A V + VV N++
Sbjct: 136 KCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARG-VFDRSSKGDVVTWNVMISG 194
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
YNR+ Q++E++KL ++ER R+ P + T
Sbjct: 195 YNRSKQFDESMKLFDEMER-------------------------------MRVLPSSITL 223
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
VS+LSACSKL +L +G +H +K + I + N LIDMY CG + +++ IF+ M
Sbjct: 224 VSVLSACSKLKDLNVGKRVHRYVKDLK-IEPVRVLENALIDMYAACGDMDTALGIFDNMK 282
Query: 535 DRNVITWTALISA---LGLNGFAQRALEK----------------------------FRE 563
R+VI+WTA+++ LG G A+ +K FRE
Sbjct: 283 SRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFRE 342
Query: 564 MEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY--HCVVDLLVR 621
M+ KPD ++++LTAC H G + G + ++++ E ++D + + ++D+
Sbjct: 343 MQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKN---EIKIDSFVGNALIDMYFN 399
Query: 622 YGHLKEAEKIITTMP 636
G++++A +I MP
Sbjct: 400 CGNVEKAIRIFNAMP 414
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 254/498 (51%), Gaps = 40/498 (8%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM------FKDVEIRDVVSWNTIIG 215
+IH +IK LL+ + + A I M F+ ++ D ++N +I
Sbjct: 42 EIHAHLIKT----RLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIR 97
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
++ +A+ L+ M + V P++ TF ++ C+ LQ G+ IHA ++K
Sbjct: 98 GFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGS 157
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELL 334
FV + L+ YA C +E A F E+S +N+ +WN++ GY + + L E+L
Sbjct: 158 HGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEML 217
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
+L R +E T VL + L+L G + Y + +
Sbjct: 218 ELDIRFDEVTLVSVLTACGRLADLEL----------------GEWINRYVEEKGLKGNPT 261
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
+T+L +Y + GQ + +L Q++R D+V+W+ +I+ + +E
Sbjct: 262 LITSL------------VDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCRE 309
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
L+LF M+ A I P+ T VS+LS+C+ L L G +H IKK + + T + L+
Sbjct: 310 ALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVT-LGTALM 368
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
D Y KCGS+ SS+++F +M +NV++WT LI L NG ++ALE F M +P+ V
Sbjct: 369 DFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDV 428
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
I VL+AC H GLV EG +LF M+R +G+EP ++HY C+VD+L R G ++EA + I
Sbjct: 429 TFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKN 488
Query: 635 MPFPPNALIWRTFLEGCQ 652
MP PNA+IWRT L C+
Sbjct: 489 MPIQPNAVIWRTLLASCK 506
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 231/454 (50%), Gaps = 21/454 (4%)
Query: 8 SFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGAQLQASV 65
++N +I ++ +A+ +F M +P +FTF +L C L + EG Q+ A +
Sbjct: 91 AYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALI 150
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
+K G F + FV L+ +Y G ++ VF++M +++ TWNS+ + + K G E+
Sbjct: 151 MKCG-FGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEV 209
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
+ LF E++ ++ E + V V+ DLE GE I+ V + G + SLV+M
Sbjct: 210 VKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDM 269
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C + +A ++F ++ RDVV+W+ +I +++ +AL+L+ M + PN+ T
Sbjct: 270 YAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITM 329
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
V +++SCA L GK +H + K ++ V +G+AL+DFYAKC ++E + F ++
Sbjct: 330 VSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPV 389
Query: 306 KNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQLLQLHCL 363
KN++SW LI G AS ++ +L+ PN+ TF VL + S A + + L
Sbjct: 390 KNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDL 449
Query: 364 IIRM----GYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PRAVVPANIIAGIYNRT 418
+ M G E G ++ ++GLI +A F+ + I P AV+ ++A
Sbjct: 450 FVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLA------ 503
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+ K+ +E + ++I H+GDY
Sbjct: 504 -----SCKVHKNVEIGEESLKQLIILEPTHSGDY 532
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 221/477 (46%), Gaps = 32/477 (6%)
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG 150
+D VS+F + +N ++ F + + LF E+ + V E +F ++
Sbjct: 74 MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKV 133
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
S Q L GEQIH L++K GF V N+L++MY C + A ++F ++ R+V +W
Sbjct: 134 CSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTW 193
Query: 211 NTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
N++ +S N+ + ++L+ M +DI F ++ T V V+ +C L + LG+ I+ V
Sbjct: 194 NSMFAGYTKSGNWEEVVKLFHEMLELDIRF-DEVTLVSVLTACGRLADLELGEWINRYVE 252
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIF 328
+ L+ + + ++LVD YAKC ++ A F ++ +++V+W+A+I GY+ S ++
Sbjct: 253 EKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALD 312
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
L E+ + PNE T +L S VLG+L T
Sbjct: 313 LFHEMQKANIDPNEITMVSILSSCA---------------------VLGALETGKW---- 347
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
F+ + V + Y + G ++++ ++ +++SW ++I A
Sbjct: 348 ---VHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLAS 404
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
NG K+ LE F M + P++ TF+ +LSACS + G L + + I
Sbjct: 405 NGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIE 464
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREM 564
++D+ G+ G I + + M N + W L+++ ++ + E +++
Sbjct: 465 HYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQL 521
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 161/324 (49%), Gaps = 15/324 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M +RNV ++NS+ + Y++ G E+ +++F M+ + T +L+ C L +E G
Sbjct: 185 MSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELG 244
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V + GL + T+L+ +Y + G +D +F+ M R+ +V W++++S + +
Sbjct: 245 EWINRYVEEKGLKGNPTLI-TSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQ 303
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + LF E+ ++ + E + V ++ + LE G+ +H + K + +
Sbjct: 304 ASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTL 363
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+L++ Y +C + S+ ++F + +++V+SW +I LA + KALE + M V
Sbjct: 364 GTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNV 423
Query: 239 FPNQTTFVYVINSC--AGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEG 295
PN TF+ V+++C AGL + G+ + + ++ +E + +VD + +E
Sbjct: 424 EPNDVTFIGVLSACSHAGLVDE--GRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEE 481
Query: 296 AHLCFSEISN----KNIVSWNALI 315
A F I N N V W L+
Sbjct: 482 A---FQFIKNMPIQPNAVIWRTLL 502
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
MP +NV+S+ +I + G + AL F M+ + EP TF G+LS C V EG
Sbjct: 387 MPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEG 446
Query: 59 AQLQASVLKN-GLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIF 116
L S+ ++ G+ G ++ + GR G ++E ++MP + + V W ++++
Sbjct: 447 RDLFVSMSRDFGIEPRIEHYG-CMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASC 505
Query: 117 GKHGFVE 123
H VE
Sbjct: 506 KVHKNVE 512
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 167/581 (28%), Positives = 272/581 (46%), Gaps = 39/581 (6%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
+G A+L + R G VF MP + + +WN +V +GK G +++ + L+ ++ +
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAG 184
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
V +F V+ D G ++H V++ GF E+ V N+L+ MY +C + +A
Sbjct: 185 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAAR 244
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
K+F + + D +SWN +I E+ LEL+L M D V PN T V + L
Sbjct: 245 KVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLS 304
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ K +H +K DV ++L+ YA + A FS + ++ ++W A+I
Sbjct: 305 DVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMIS 364
Query: 317 GYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYEN 371
GY P + L+++ P++ T + L + L +LH L G+ +
Sbjct: 365 GYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFIS 424
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
Y V +++ YAKS I A +++ +
Sbjct: 425 YIVVTNAILEMYAKSKRIDKA--------------------------------IEVFKCM 452
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
D+VSW+ +IA N E L F++M A + P++ TF++ L+AC+ L G
Sbjct: 453 HEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFIAALAACAATGALRSGK 511
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H + + I + ++ N LID+Y KCG G + F ++V++W +I+ +
Sbjct: 512 EIHAHVLRCGI-EYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAH 570
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G AL F +M +G PD V +A+L AC GG+V EG ELF M Y + P + H
Sbjct: 571 GHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKH 630
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y C+VDLL R G L EA I MP P+A +W L GC+
Sbjct: 631 YACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCR 671
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 253/558 (45%), Gaps = 48/558 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+R+V S+N ++ Y + G +++AL ++ M+ G P +TF +L SC + G
Sbjct: 149 MPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMG 208
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ A VL+ G F + V AL+ +Y + G + VF+ M ++WN++++ +
Sbjct: 209 REVHAHVLRFG-FGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFE 267
Query: 119 HGFVEDCMFLFCELVRSEVA--LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+G + LF ++ EV L + V V GL + D+ F +++HGL +K GF ++
Sbjct: 268 NGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLS--DVTFAKEMHGLAVKRGFAGDV 325
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
NSL+ MY + A +F ++ RD ++W +I ++ KALE+Y M V+
Sbjct: 326 AFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVN 385
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+ T + +CA L + +G +H + V +A+++ YAK ++ A
Sbjct: 386 NVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKA 445
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + K++VSW+++I G+ + +PN TF L + A
Sbjct: 446 IEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVKPNSVTFIAALAACAATG 505
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L ++H ++R G E Y+ +L+ Y K G A A A
Sbjct: 506 ALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGA----------- 554
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
D+VSWNI+IA +G L F M PD
Sbjct: 555 ---------------------KDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEV 593
Query: 473 TFVSLLSACSKLCNLALGSSL-HGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIF 530
TFV+LL ACS+ ++ G L H + +K I+ + + C ++D+ + G + +
Sbjct: 594 TFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYAC--MVDLLSRAGQLTEAYNFI 651
Query: 531 NEMT-DRNVITWTALISA 547
NEM + W AL++
Sbjct: 652 NEMPITPDAAVWGALLNG 669
>gi|302796687|ref|XP_002980105.1| hypothetical protein SELMODRAFT_111767 [Selaginella moellendorffii]
gi|300152332|gb|EFJ18975.1| hypothetical protein SELMODRAFT_111767 [Selaginella moellendorffii]
Length = 696
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 165/649 (25%), Positives = 315/649 (48%), Gaps = 45/649 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP+R+++S+N++I+ Y++ + A++++ Y G +P + TF LL +C + ++
Sbjct: 71 MPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLKFG 130
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+L F +D V L+ +Y G LD+ +VFE + + TW ++++ + +H
Sbjct: 131 RLLHEHFLGTNFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFQPDVCTWTTVIAAYTRH 190
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G +E + ++ + + E +F+ V+ S+ + LE G+ +H L + +G D+ L +
Sbjct: 191 GKLECAFATWRKMHQEGLRSNEITFLTVLDACSSLEVLETGKHVHRLALGSGLDFSLRME 250
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEI-RDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY +C+ + A +F + R+V++W ++ A+ E+ + L M ++ V
Sbjct: 251 NSLISMYGKCSSLGDARDVFDRMRYRRNVITWTAMVAGHAQCEDLAGGIYLCREMMLEGV 310
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P TF +++ C G + +G SIH V +E D V +ALV+ Y+K LE A
Sbjct: 311 RPQPVTFAGLLDGCRGREALAVGASIHGYVRLGGMESDSAVNNALVNMYSKSGGLEDAVK 370
Query: 299 CFSEISNK-NIVSWNALILGYAS---KSSPTSIFLLIELLQLGYRPNEFTFSHVLR-SSL 353
F++ SW ++I Y K T ++ ++L G +E F+ VL
Sbjct: 371 VFNDQRQDLKTSSWASVIGAYVQHGLKREATELYHHLDL--EGMEVDENVFASVLGFCDS 428
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
A Q+ +H I+ G E ++MT+Y K+
Sbjct: 429 ATQVRDVHSRILASGLEQRMVAANAVMTAYGKA--------------------------- 461
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
G +E ++ + RP ++SW+ +IAA G + E ++ F+ M + P+ T
Sbjct: 462 -----GHPDEAREVFLGISRPSVISWSALIAA---YGQHWEAIKTFELMNLEGVKPNATT 513
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
S+L AC+ + G +H L+ + +T V N +Y KC + + ++F+ +
Sbjct: 514 LTSVLRACATVGAHEQGRRIHALVLAGP-YAQNTTVLNAAASLYAKCSRVADASRVFSSI 572
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++ ++W A++SA G + A+ R+M+ GF PD + I +L +C G +
Sbjct: 573 PCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSGQLAAAC 632
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
E M +G+ P +HY C++D+L R G + +A ++ MP+ +A+
Sbjct: 633 ECLSSMVCDFGMVPAREHYVCLIDVLGRAGRVGDAVELKDCMPYEADAV 681
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 224/495 (45%), Gaps = 43/495 (8%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
G+QIH ++ +G +L++NSLV MY +C + A F + RD++SWN +I A+
Sbjct: 29 GKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAFDRMPERDLISWNAMITVYAQ 88
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
E +A++LY ++ P++ TF ++N+C + G+ +H + D V
Sbjct: 89 HECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLKFGRLLHEHFLGTNFVSDQIV 148
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGY 338
+ L+ Y+ C +L+ A F ++ +W +I Y F ++ Q G
Sbjct: 149 CNGLISMYSDCGSLDDATAVFEWSFQPDVCTWTTVIAAYTRHGKLECAFATWRKMHQEGL 208
Query: 339 RPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
R NE TF VL + + ++L+ +H L + G + + SL++ Y K + DA
Sbjct: 209 RSNEITFLTVLDACSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMYGKCSSLGDA-- 266
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
+++R +Y R ++++W ++A A D
Sbjct: 267 -----------------RDVFDRM-RY-----------RRNVITWTAMVAGHAQCEDLAG 297
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
+ L + M + P TF LL C LA+G+S+HG ++ + SD+ V N L+
Sbjct: 298 GIYLCREMMLEGVRPQPVTFAGLLDGCRGREALAVGASIHGYVRLGG-MESDSAVNNALV 356
Query: 515 DMYGKCGSIGSSVKIFNEM-TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+MY K G + +VK+FN+ D +W ++I A +G + A E + ++ G + D
Sbjct: 357 NMYSKSGGLEDAVKVFNDQRQDLKTSSWASVIGAYVQHGLKREATELYHHLDLEGMEVDE 416
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
+VL C VR ++ R+ S G+E M + V+ + GH EA ++
Sbjct: 417 NVFASVLGFCDSATQVR---DVHSRILAS-GLEQRMVAANAVMTAYGKAGHPDEAREVFL 472
Query: 634 TMPFPPNALIWRTFL 648
+ P+ + W +
Sbjct: 473 GIS-RPSVISWSALI 486
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 192/404 (47%), Gaps = 38/404 (9%)
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M ++ V ++ T + +++CA L +S+ GK IHA+++ + L V + ++LV Y KC +
Sbjct: 1 MDLEGVQGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS 351
+E A F + ++++SWNA+I YA L +L G +P+E TF+ +L +
Sbjct: 61 VEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNA 120
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
A L+ L+ +E+ LG + +SD + N +
Sbjct: 121 CFASGDLKFGRLL-------HEHFLG--------TNFVSDQIV-------------CNGL 152
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y+ G ++ + +PD+ +W VIAA +G + ++ M + +
Sbjct: 153 ISMYSDCGSLDDATAVFEWSFQPDVCTWTTVIAAYTRHGKLECAFATWRKMHQEGLRSNE 212
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+++L ACS L L G +H L + + S + N LI MYGKC S+G + +F+
Sbjct: 213 ITFLTVLDACSSLEVLETGKHVHRLALGSGLDFS-LRMENSLISMYGKCSSLGDARDVFD 271
Query: 532 EMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
M RNVITWTA+++ + REM G +P V +L CR R
Sbjct: 272 RMRYRRNVITWTAMVAGHAQCEDLAGGIYLCREMMLEGVRPQPVTFAGLLDGCRG----R 327
Query: 591 EGMELFERMN---RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
E + + ++ R G+E + + +V++ + G L++A K+
Sbjct: 328 EALAVGASIHGYVRLGGMESDSAVNNALVNMYSKSGGLEDAVKV 371
>gi|302774729|ref|XP_002970781.1| hypothetical protein SELMODRAFT_11658 [Selaginella moellendorffii]
gi|300161492|gb|EFJ28107.1| hypothetical protein SELMODRAFT_11658 [Selaginella moellendorffii]
Length = 517
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 159/515 (30%), Positives = 256/515 (49%), Gaps = 42/515 (8%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
+ ++ S ++ L G ++H ++++ D L+ N LV MY +C + A +F
Sbjct: 1 YAPLLRQCSKQRSLHSGRRLHAQILRHRLDRHTLLCNLLVQMYGRCGCLDEARSIFDKTP 60
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGK 262
R++ SW+ +I A A++ + AL +Y M I + TT+V +++C+ L + GK
Sbjct: 61 ERNLFSWSIMIAAYAQNGHPTFALAVYREMLQRSIHAIDSTTYVSALSACSALGDLETGK 120
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
SIH +++ + LE D F+G+AL+ Y+KC LE AH CF + K+IV WNA+I +A
Sbjct: 121 SIHERILSSKLEIDAFLGTALISMYSKCGCLEEAHECFDCVLRKDIVVWNAMIAAFAQNG 180
Query: 323 SPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLG 377
P + G +PN T L + L+ +H LI + E LG
Sbjct: 181 HPQRALNFFHAIPRGELQPNNLTLVSALDACSDLAALEEGRKIHALI----ESSPELTLG 236
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
M N + +Y + G+ + + L +V
Sbjct: 237 GSM---------------------------GNALVNLYGKCGRAIDARAVFDALRPRTVV 269
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA-LGSSLHGL 496
SW +IAA A NG + LELF+ M A P+ T +S+L ACS+ + G ++H
Sbjct: 270 SWTSMIAAYAQNGHSDQALELFQRMDMA---PNGVTLLSVLQACSEHRKGSHAGKTIHAH 326
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
I+ S + + L++MYGK G++ S++ +F +M +R+ ITWTA+IS+ +G +++
Sbjct: 327 IRLAGFDGS-PLLDSALVNMYGKVGNLDSAMVVFTQMRERDAITWTAMISSYAQHGHSRQ 385
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
AL F M G D V L V +AC H G V+ G + F R +G P +HY +
Sbjct: 386 ALSLFSSMLLDGIATDAVTLACVSSACSHSGDVKLGWDYFVSSVRDFGERPTFEHYVVMS 445
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
D+L R G L+EAE ++ +MPF P+ + WRT L C
Sbjct: 446 DMLSRAGRLQEAEDLLRSMPFQPDLVSWRTLLSAC 480
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 231/460 (50%), Gaps = 41/460 (8%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFT--FGGLLSCDSLNPVE-G 58
P+RN+ S++ +I+AY++ G+ AL ++ M+ R T L +C +L +E G
Sbjct: 60 PERNLFSWSIMIAAYAQNGHPTFALAVYREMLQRSIHAIDSTTYVSALSACSALGDLETG 119
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +L + L DAF+GTAL+ +Y + GCL+E F+ + RK +V WN++++ F +
Sbjct: 120 KSIHERILSSKLEI-DAFLGTALISMYSKCGCLEEAHECFDCVLRKDIVVWNAMIAAFAQ 178
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL-- 176
+G + + F + R E+ + V + S+ LE G +IH L I++ + L
Sbjct: 179 NGHPQRALNFFHAIPRGELQPNNLTLVSALDACSDLAALEEGRKIHAL-IESSPELTLGG 237
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ N+LVN+Y +C A +F + R VVSW ++I A A++ + +ALEL+ RM
Sbjct: 238 SMGNALVNLYGKCGRAIDARAVFDALRPRTVVSWTSMIAAYAQNGHSDQALELFQRMD-- 295
Query: 237 IVFPNQTTFVYVINSCA-GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ PN T + V+ +C+ + S GK+IHA + + + SALV+ Y K NL+
Sbjct: 296 -MAPNGVTLLSVLQACSEHRKGSHAGKTIHAHIRLAGFDGSPLLDSALVNMYGKVGNLDS 354
Query: 296 AHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A + F+++ ++ ++W A+I YA S ++ L +L G + T + V +
Sbjct: 355 AMVVFTQMRERDAITWTAMISSYAQHGHSRQALSLFSSMLLDGIATDAVTLACVSSAC-- 412
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
H +++G++ + +S F VV +++++
Sbjct: 413 -----SHSGDVKLGWDYF----------------VSSVRDFGERPTFEHYVVMSDMLS-- 449
Query: 415 YNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACA-HNGDY 452
R G+ E LL + +PD+VSW +++AC+ HN +
Sbjct: 450 --RAGRLQEAEDLLRSMPFQPDLVSWRTLLSACSNHNNPH 487
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 120/500 (24%), Positives = 235/500 (47%), Gaps = 47/500 (9%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G +L A +L++ L + L+ +YGR GCLDE S+F+ P ++L +W+ +++ +
Sbjct: 17 GRRLHAQILRHRLD-RHTLLCNLLVQMYGRCGCLDEARSIFDKTPERNLFSWSIMIAAYA 75
Query: 118 KHGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G + ++ E++ RS A+ +++V + S DLE G+ IH ++ + + +
Sbjct: 76 QNGHPTFALAVYREMLQRSIHAIDSTTYVSALSACSALGDLETGKSIHERILSSKLEIDA 135
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ +L++MY +C + A + F V +D+V WN +I A A++ + +AL + +
Sbjct: 136 FLGTALISMYSKCGCLEEAHECFDCVLRKDIVVWNAMIAAFAQNGHPQRALNFFHAIPRG 195
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV--FVGSALVDFYAKCDNLE 294
+ PN T V +++C+ L G+ IHA +I+++ E + +G+ALV+ Y KC
Sbjct: 196 ELQPNNLTLVSALDACSDLAALEEGRKIHA-LIESSPELTLGGSMGNALVNLYGKCGRAI 254
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F + + +VSW ++I YA L + + + PN T VL++
Sbjct: 255 DARAVFDALRPRTVVSWTSMIAAYAQNGHSDQALELFQRMDMA--PNGVTLLSVLQA--- 309
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSL-MTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
C R G + + + + + S L+ AL
Sbjct: 310 -------CSEHRKGSHAGKTIHAHIRLAGFDGSPLLDSAL------------------VN 344
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y + G + + + +Q+ D ++W +I++ A +G ++ L LF M I D T
Sbjct: 345 MYGKVGNLDSAMVVFTQMRERDAITWTAMISSYAQHGHSRQALSLFSSMLLDGIATDAVT 404
Query: 474 FVSLLSACSKLCNLALG-----SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
+ SACS ++ LG SS+ ++ + +V ++ DM + G + +
Sbjct: 405 LACVSSACSHSGDVKLGWDYFVSSVRDFGERPTF---EHYV--VMSDMLSRAGRLQEAED 459
Query: 529 IFNEMT-DRNVITWTALISA 547
+ M ++++W L+SA
Sbjct: 460 LLRSMPFQPDLVSWRTLLSA 479
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 180/575 (31%), Positives = 277/575 (48%), Gaps = 48/575 (8%)
Query: 94 VVSVFEDM----PRKSLVTWNSIVSIFGKHGFV-EDCMFLFCELVRSEVALTESSFVGVI 148
++S+F + P + WN+ H FV E+ + E +S V L + V
Sbjct: 29 IISIFHNSSSLSPITKTINWNT------THSFVRENPLLSILERCKSLVQLKQIQAQMVS 82
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE-----KMFKDVE 203
GL I+NGF LVA CA S E ++ ++
Sbjct: 83 TGL----------------IENGFAASRLVAF--------CALSESKELDYCTRILYRIK 118
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVD-IVFPNQTTFVYVINSCAGLQNSILGK 262
+V SWN I ES + LY RM + + P+ T+ ++ C G +S LG
Sbjct: 119 ELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGL 178
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
+ V+K ECD+FV +A + C L A+ F++ +++V+WN++I G +
Sbjct: 179 GVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRG 238
Query: 323 -SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLG 377
+ +I + E+ RPNE T ++ S Q L L HC I G E +
Sbjct: 239 LAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTN 298
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
+LM Y K G + A + V ++ G Y R G + ++L ++ +V
Sbjct: 299 ALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLG-YARFGFLDVAREILYKIPEKSVV 357
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
WN +I+ C KE L LF M+ I PD T V+ LSACS+L L +G +H I
Sbjct: 358 PWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYI 417
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
++ ++ S D + L+DMY KCG+I ++++F E+ RN +TWTA+I L L+G AQ A
Sbjct: 418 ERHKL-SIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDA 476
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
L F +M +G PD + + VL+AC HGGLV EG + F M+ + V P++ HY C+VD
Sbjct: 477 LSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVD 536
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
LL R GHL+EAE+++ MP +A + C+
Sbjct: 537 LLGRAGHLEEAEELVKNMPMAADAAVLGALFFACR 571
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 184/382 (48%), Gaps = 36/382 (9%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLLS--CDSLNPVEGAQL 61
NV S+N+ I Y G +E ++ M+ G +P T+ LL C + G +
Sbjct: 121 NVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGV 180
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
VLK G C D FV A + + G L VF + LVTWNS+++ K G
Sbjct: 181 LGHVLKFGFEC-DIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGL 239
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + ++ E+ +V E + +G+I S QDL G++ H + ++G ++ + + N+
Sbjct: 240 AIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNA 299
Query: 182 LVNMYFQCAGIWSAEKMFKDV-------------------------EI------RDVVSW 210
L++MY +C + +A +F ++ EI + VV W
Sbjct: 300 LMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPW 359
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
N II +++ +AL L+ M + + P++ T V +++C+ L +G IH + +
Sbjct: 360 NAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER 419
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFL 329
+ L DV +G+ALVD YAKC N+ A F EI +N ++W A+I G A ++ ++
Sbjct: 420 HKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSY 479
Query: 330 LIELLQLGYRPNEFTFSHVLRS 351
+++ +G P+E TF VL +
Sbjct: 480 FSKMIHIGIVPDEITFLGVLSA 501
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+P+++VV +N+IIS + ++AL +F M R EP + T LS C L ++
Sbjct: 351 IPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVG 410
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ D +GTAL+ +Y + G + + VFE++P+++ +TW +++ H
Sbjct: 411 IWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALH 470
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVI 148
G +D + F +++ + E +F+GV+
Sbjct: 471 GNAQDALSYFSKMIHIGIVPDEITFLGVL 499
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+P RN +++ ++I + G +DAL F MI+ G P + TF G+LS C VE
Sbjct: 452 IPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEG 511
Query: 60 QLQASVLKNGLFCADAFVG-TALLGLYGRHGCLDEVVSVFEDMP 102
+ S + + + + ++ L GR G L+E + ++MP
Sbjct: 512 RKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMP 555
>gi|125550837|gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indica Group]
Length = 591
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 167/532 (31%), Positives = 255/532 (47%), Gaps = 54/532 (10%)
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL----------LVA-NSLVNMYF 187
L + F G++ E DL G +H V+KN + L LVA N+LV+MY
Sbjct: 9 LNYARFSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYA 68
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFV 246
+C A ++F ++ +RD VSWN++I A S G AL L+ RM D ++ TF
Sbjct: 69 RCGRREDAARVFDEMRVRDAVSWNSLIAA---SRGAGDALALFRRMLRSDARACDRATFT 125
Query: 247 YVINSCA--GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
V++ CA G + +H V+ E +V VG+ALV Y +C + A F ++
Sbjct: 126 TVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMA 185
Query: 305 NKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLLQL 360
KN+++W A+I G A F L + N T+S L RS A + Q+
Sbjct: 186 EKNVITWTAMISGMARAELYKESFSLFGQMIRTVDANNATYSCTLLACARSLAAREGQQV 245
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H L+++ G+E +V LM Y+K GL+ DAL
Sbjct: 246 HGLVVKAGFEADLHVESGLMDVYSKCGLMEDAL--------------------------- 278
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+ PD V +++ A NG ++ ELF M A D T ++L A
Sbjct: 279 -----TVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSTVLGA 333
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
ALG +H L+ K +T+VCN L++MY KCG + SV++F+EM +N ++
Sbjct: 334 FGASAPFALGKQIHALVIK-RCFGVNTYVCNGLVNMYSKCGELRESVQVFDEMPSKNSVS 392
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W ++I+A +G + F M+ G KP V +++L AC H G ++G+E+ M+
Sbjct: 393 WNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMS 452
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
YGV P M+HY CVVD+L R G L +A+ I PF +AL+W+ + C
Sbjct: 453 SQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDSALLWQALMGACS 504
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 153/550 (27%), Positives = 257/550 (46%), Gaps = 76/550 (13%)
Query: 44 FGGLL-SCDSLNPVE-GAQLQASVLKNGL---FCADA-------FVGTALLGLYGRHGCL 91
F GLL SC + GA L A+V+KN CA AL+ +Y R G
Sbjct: 14 FSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYARCGRR 73
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEV-ALTESSFVGVIH- 149
++ VF++M + V+WNS+++ G D + LF ++RS+ A ++F V+
Sbjct: 74 EDAARVFDEMRVRDAVSWNSLIAASRGAG---DALALFRRMLRSDARACDRATFTTVLSE 130
Query: 150 -GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
+ L +HGLV+ GF+ E+ V N+LV YF+C SAE++F + ++V+
Sbjct: 131 CARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVI 190
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
+W +I +A +E + ++ L+ +M + V N T+ + +CA + G+ +H V
Sbjct: 191 TWTAMISGMARAELYKESFSLFGQM-IRTVDANNATYSCTLLACARSLAAREGQQVHGLV 249
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
+K E D+ V S L+D Y+KC +E A F + V +++G+A F
Sbjct: 250 VKAGFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAF 309
Query: 329 -LLIELLQLGYRPNEFTFSHVL---RSSLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSY 383
L E++ G +E T S VL +S F L Q+H L+I+ + YV L+
Sbjct: 310 ELFAEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVN-- 367
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
+Y++ G+ E+V++ ++ + VSWN +I
Sbjct: 368 ------------------------------MYSKCGELRESVQVFDEMPSKNSVSWNSII 397
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG-------SSLHGL 496
AA A +G EV +LF+ M+A P + TF+SLL ACS + + G SS +G+
Sbjct: 398 AAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGV 457
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE--MTDRNVITWTALISALGLNG-- 552
+ + E + C ++DM G+ G + + + TD + + W AL+ A +G
Sbjct: 458 LPRME-----HYAC--VVDMLGRAGLLDDAKSFIEDGPFTD-SALLWQALMGACSFHGNS 509
Query: 553 -FAQRALEKF 561
+ A EK
Sbjct: 510 EVGKHAAEKL 519
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 136/266 (51%), Gaps = 4/266 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSC-DSLNPVEG 58
M ++NV+++ ++IS +R +++ +F MI R + T+ LL+C SL EG
Sbjct: 184 MAEKNVITWTAMISGMARAELYKESFSLFGQMI-RTVDANNATYSCTLLACARSLAAREG 242
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ V+K G F AD V + L+ +Y + G +++ ++VF V I+ F +
Sbjct: 243 QQVHGLVVKAG-FEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQ 301
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G E LF E+V + + E++ V+ G+QIH LVIK F V
Sbjct: 302 NGLEEKAFELFAEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYV 361
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N LVNMY +C + + ++F ++ ++ VSWN+II A A + + +L+ M D
Sbjct: 362 CNGLVNMYSKCGELRESVQVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGA 421
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSI 264
P TF+ ++++C+ + ++ G I
Sbjct: 422 KPTDVTFLSLLHACSHVGSAKKGLEI 447
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP +N VS+NSII+A++R G+ + ++F M G +PT TF LL +C + + G
Sbjct: 385 MPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKG 444
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
++ S+ ++ + GR G LD+ S ED P S + W +++
Sbjct: 445 LEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDSALLWQALMGACS 504
Query: 118 KHGFVE 123
HG E
Sbjct: 505 FHGNSE 510
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 180/575 (31%), Positives = 277/575 (48%), Gaps = 48/575 (8%)
Query: 94 VVSVFEDM----PRKSLVTWNSIVSIFGKHGFV-EDCMFLFCELVRSEVALTESSFVGVI 148
++S+F + P + WN+ H FV E+ + E +S V L + V
Sbjct: 29 IISIFHNSSSLSPITKTINWNT------THSFVRENPLLSILERCKSLVQLKQIQAQMVS 82
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE-----KMFKDVE 203
GL I+NGF LVA CA S E ++ ++
Sbjct: 83 TGL----------------IENGFAASRLVAF--------CALSESKELDYCTRILYRIK 118
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVD-IVFPNQTTFVYVINSCAGLQNSILGK 262
+V SWN I ES + LY RM + + P+ T+ ++ C G +S LG
Sbjct: 119 ELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGL 178
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
+ V+K ECD+FV +A + C L A+ F++ +++V+WN++I G +
Sbjct: 179 GVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRG 238
Query: 323 -SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLG 377
+ +I + E+ RPNE T ++ S Q L L HC I G E +
Sbjct: 239 LAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTN 298
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
+LM Y K G + A + V ++ G Y R G + ++L ++ +V
Sbjct: 299 ALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLG-YARFGFLDVAREILYKIPEKSVV 357
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
WN +I+ C KE L LF M+ I PD T V+ LSACS+L L +G +H I
Sbjct: 358 PWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYI 417
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
++ ++ S D + L+DMY KCG+I ++++F E+ RN +TWTA+I L L+G AQ A
Sbjct: 418 ERHKL-SIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDA 476
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
L F +M +G PD + + VL+AC HGGLV EG + F M+ + V P++ HY C+VD
Sbjct: 477 LSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVD 536
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
LL R GHL+EAE+++ MP +A + C+
Sbjct: 537 LLGRAGHLEEAEELVKNMPMAADAAVLGALFFACR 571
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 184/382 (48%), Gaps = 36/382 (9%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLLS--CDSLNPVEGAQL 61
NV S+N+ I Y G +E ++ M+ G +P T+ LL C + G +
Sbjct: 121 NVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGV 180
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
VLK G C D FV A + + G L VF + LVTWNS+++ K G
Sbjct: 181 LGHVLKFGFEC-DIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGL 239
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + ++ E+ +V E + +G+I S QDL G++ H + ++G ++ + + N+
Sbjct: 240 AIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNA 299
Query: 182 LVNMYFQCAGIWSAEKMFKDV-------------------------EI------RDVVSW 210
L++MY +C + +A +F ++ EI + VV W
Sbjct: 300 LMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPW 359
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
N II +++ +AL L+ M + + P++ T V +++C+ L +G IH + +
Sbjct: 360 NAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER 419
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFL 329
+ L DV +G+ALVD YAKC N+ A F EI +N ++W A+I G A ++ ++
Sbjct: 420 HKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSY 479
Query: 330 LIELLQLGYRPNEFTFSHVLRS 351
+++ +G P+E TF VL +
Sbjct: 480 FSKMIHIGIVPDEITFLGVLSA 501
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+P+++VV +N+IIS + ++AL +F M R EP + T LS C L ++
Sbjct: 351 IPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVG 410
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ D +GTAL+ +Y + G + + VFE++P+++ +TW +++ H
Sbjct: 411 IWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALH 470
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVI 148
G +D + F +++ + E +F+GV+
Sbjct: 471 GNAQDALSYFSKMIHIGIVPDEITFLGVL 499
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+P RN +++ ++I + G +DAL F MI+ G P + TF G+LS C VE
Sbjct: 452 IPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEG 511
Query: 60 QLQASVLKNGLFCADAFVG-TALLGLYGRHGCLDEVVSVFEDMP 102
+ S + + + + ++ L GR G L+E + ++MP
Sbjct: 512 RKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMP 555
>gi|302805298|ref|XP_002984400.1| hypothetical protein SELMODRAFT_120073 [Selaginella moellendorffii]
gi|300147788|gb|EFJ14450.1| hypothetical protein SELMODRAFT_120073 [Selaginella moellendorffii]
Length = 660
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 171/659 (25%), Positives = 313/659 (47%), Gaps = 45/659 (6%)
Query: 1 MPDR-NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGA 59
M D+ NVV++N+ I A + AL+ F ++ +G P TF S + P E
Sbjct: 1 MTDKTNVVTWNAFIRALASSRDASGALQTFRSLLLQGLVPDTVTFINA-SQGAKTPPEAK 59
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
L+ ++G+ D +G AL+ ++G E VF+ K++V+WN+++S + ++
Sbjct: 60 YLETCRQESGVQL-DIALGNALINMFGGSSQACEARRVFDATHNKNIVSWNAMLSAYSQN 118
Query: 120 GFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E+ + LF ++ ++ + +F V+ +N ++L G+ H ++ G ++ + V
Sbjct: 119 GHFEETIALFKQMASTKTVKPDKLTFASVLSSCANLENLREGKLAHAAAVEAGLEFAVPV 178
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
A +L+ MY +C + A +F DVV+W +I A A++ +A+ L+ RM+V
Sbjct: 179 AATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRMTVP-- 236
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ F + +CA +N G+ + A++++ L+ + V +A++D Y KC +
Sbjct: 237 -PDGVAFATALGACASAENLEAGRVVRAQIVELGLDAERAVANAVLDLYGKCAEIVETAE 295
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFT----FSHVLRSSL 353
F + ++ VSWN ++ YA +QL G P+E + F+ VL S
Sbjct: 296 IFGRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPSEVSLVSSFTSVLSSCA 355
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ L + G ++ A A L AV A +
Sbjct: 356 NLENL--------------------------REGKLAHAAAVEAGLEF--AVPVAATLIQ 387
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y++ E + S+ D+V+W ++I+A A NG +E + LF + + PD
Sbjct: 388 MYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRIT---VPPDGVG 444
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F + L AC++ NL G +++ + ++ V + ++D+YGKC I + +IF+ M
Sbjct: 445 FATALEACARAENLEAGVVRAKIVELG--LDAERAVADAVLDLYGKCAEIVETAEIFDRM 502
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
R+ ++W +++A G +L FR M+ G P V+L++VL+ H GLV +G
Sbjct: 503 RQRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPSEVSLVSVLSTYSHAGLVEQGC 562
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F + YG+ P + CVVDLL R G + I P ++ +W+ L C+
Sbjct: 563 QCFASIASDYGMVPSREQQGCVVDLLGRAGSWIAEDLIRVVAPSTSSSELWKAVLSSCR 621
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 205/484 (42%), Gaps = 71/484 (14%)
Query: 206 DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
+VV+WN I ALA S + AL+ + + + + P+ TF IN+ G + K +
Sbjct: 6 NVVTWNAFIRALASSRDASGALQTFRSLLLQGLVPDTVTF---INASQGAKTPPEAKYLE 62
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-P 324
++ ++ D+ +G+AL++ + A F NKNIVSWNA++ Y+
Sbjct: 63 TCRQESGVQLDIALGNALINMFGGSSQACEARRVFDATHNKNIVSWNAMLSAYSQNGHFE 122
Query: 325 TSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSY 383
+I L ++ +P++ TF+ VL S + L
Sbjct: 123 ETIALFKQMASTKTVKPDKLTFASVLSSCANLENL------------------------- 157
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
+ G ++ A A L AV A + +Y++ E + S+ D+V+W ++I
Sbjct: 158 -REGKLAHAAAVEAGLEF--AVPVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMI 214
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
+A A NG +E + LF M + PD F + L AC+ NL G + I + +
Sbjct: 215 SAYAQNGRPQEAIALFFRMT---VPPDGVAFATALGACASAENLEAGRVVRAQIVELGL- 270
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFRE 563
++ V N ++D+YGKC I + +IF M R+ ++W +++A G +L FR
Sbjct: 271 DAERAVANAVLDLYGKCAEIVETAEIFGRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRA 330
Query: 564 MEFLGFKPDRVALIA----VLTACR-----------HGGLVREGMEL------------- 595
M+ G P V+L++ VL++C H V G+E
Sbjct: 331 MQLEGVCPSEVSLVSSFTSVLSSCANLENLREGKLAHAAAVEAGLEFAVPVAATLIQMYS 390
Query: 596 ----FERMNRSYGVEPEMD--HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
E + P D + ++ + G +EA + + PP+ + + T LE
Sbjct: 391 KCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRITVPPDGVGFATALE 450
Query: 650 GCQR 653
C R
Sbjct: 451 ACAR 454
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/516 (29%), Positives = 263/516 (50%), Gaps = 22/516 (4%)
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
+L G Q+H ++ NG D + + L+ +Y Q + A +MF + R+V SW I+
Sbjct: 25 NLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIME 84
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
++ + ++L+ M + V P+ F V +C+ L+N +GK ++ ++ E
Sbjct: 85 MYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEG 144
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELL 334
+ V +++D + KC ++ A F EI K++ WN ++ GY SK ++ + +++
Sbjct: 145 NSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMV 204
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLG-SLMTSYAKSGLI 389
G +PN T + + + LL ++H I++ + + ++G SL+ YAK +
Sbjct: 205 LEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSV 264
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE-------------TVKLLSQLERPDI 436
A + +V N + + T QY + + S+L D+
Sbjct: 265 EVARRKFGMIK-QTDLVSWNAMLAVTGFT-QYGDGKAALEFFQRMHIACSVFSELSTRDV 322
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
V WN +I+ACA +G L+L + M + + + T VS L ACSKL L G +H
Sbjct: 323 VVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQF 382
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
I + + + + F+ N LIDMYG+CGSI S +IF+ M R++++W +IS G++GF
Sbjct: 383 IIRCGLDTCN-FILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMD 441
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
A+ F++ +G KP+ + +L+AC H GL+ EG + F+ M Y ++P ++ Y C+V
Sbjct: 442 AVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMV 501
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
DLL R G E + I MPF PNA +W + L C+
Sbjct: 502 DLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACR 537
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/532 (23%), Positives = 242/532 (45%), Gaps = 67/532 (12%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ A ++ NG+ + F+G+ LL +Y + GC+++ +F+ M +++ +W +I+ ++
Sbjct: 29 GFQVHAQLVVNGVDVCE-FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYC 87
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G E+ + LF +V V F V S ++ G+ ++ ++ GF+
Sbjct: 88 GLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSC 147
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V S+++M+ +C + A + F+++E +DV WN ++ F KAL ++ +M ++
Sbjct: 148 VKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEG 207
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCDNLEGA 296
V PN T +++C L G+ IH IK L+ D+ VG++LVD+YAKC ++E A
Sbjct: 208 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 267
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F I ++VSWNA++ + Q G F FQ
Sbjct: 268 RRKFGMIKQTDLVSWNAML-------------AVTGFTQYGDGKAALEF---------FQ 305
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR---------AVVP 407
+ + C + V S++++ A+SG +AL + +N+ + +P
Sbjct: 306 RMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALP 365
Query: 408 A-----------------------------NIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
A N + +Y R G ++ ++ + + D+VS
Sbjct: 366 ACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVS 425
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
WN++I+ +G + + LF+ R + P++ TF +LLSACS + G ++K
Sbjct: 426 WNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMK 485
Query: 499 KTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISA 547
+ + + C ++D+ + G +++ +M + N W +L+ A
Sbjct: 486 TEYAMDPAVEQYAC--MVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 535
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 219/498 (43%), Gaps = 84/498 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSL-NPVEG 58
M +RNV S+ +I+ Y G E+ +++F M+N G P F F + +C L N G
Sbjct: 71 MSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 130
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +L G F ++ V ++L ++ + G +D FE++ K + WN +VS +
Sbjct: 131 KDVYDYMLSIG-FEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTS 189
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELL 177
G + + +F ++V V + + +N L G +IHG IK D +LL
Sbjct: 190 KGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLL 249
Query: 178 VANSLVNMYFQCAGI-----------------WSA--------------------EKM-- 198
V NSLV+ Y +C + W+A ++M
Sbjct: 250 VGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHI 309
Query: 199 ----FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
F ++ RDVV WN+II A A+S AL+L M++ V N T V + +C+
Sbjct: 310 ACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSK 369
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
L GK IH +I+ L+ F+ ++L+D Y +C +++ + F + +++VSWN +
Sbjct: 370 LAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVM 429
Query: 315 ILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE 373
I Y ++ L + +G +PN TF++
Sbjct: 430 ISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTN-------------------------- 463
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLS 429
L+++ + SGLI + + + A+ PA + + +R GQ+NET++ +
Sbjct: 464 -----LLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIE 518
Query: 430 QLE-RPDIVSWNIVIAAC 446
++ P+ W ++ AC
Sbjct: 519 KMPFEPNAAVWGSLLGAC 536
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 202/452 (44%), Gaps = 83/452 (18%)
Query: 235 VDIVFPNQTTFVY--VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+D+ P++ +Y ++ C L N LG +HA+++ N ++ F+GS L++ Y +
Sbjct: 1 MDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGC 60
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRS 351
+E A F ++S +N+ SW A++ Y +I L ++ G RP+ F F V ++
Sbjct: 61 VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKA 120
Query: 352 SLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ + ++ ++ +G+E V GS++ + K G ++I R
Sbjct: 121 CSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCG----------RMDIAR---- 166
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+ ++E D+ WNI+++ G++K+ L +F+ M +
Sbjct: 167 ------------------RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGV 208
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P++ T S +SAC+ L L G +HG K E + SD V N L+D Y KC S+ +
Sbjct: 209 KPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVAR 268
Query: 528 K-------------------------------------------IFNEMTDRNVITWTAL 544
+ +F+E++ R+V+ W ++
Sbjct: 269 RKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSI 328
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
ISA +G + AL+ REM + + V +++ L AC +R+G E+ + + R G
Sbjct: 329 ISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC-G 387
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
++ + ++D+ R G ++++ +I MP
Sbjct: 388 LDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 419
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 174/622 (27%), Positives = 297/622 (47%), Gaps = 40/622 (6%)
Query: 39 PTQFT---FGGLLSCDSLNPVEGAQLQASVLKNGLF---CA-DAFVGTALLGLYGRHGCL 91
P FT F L S +L+ E L A +L G F C + + L+ +Y G L
Sbjct: 26 PIHFTVTSFHRLKSPPNLH--EARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSL 83
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
F +P K ++ WN+I+ G + + +++ V ++ V+
Sbjct: 84 QHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKAC 143
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
S+ L+ G +H + + V ++++M+ +C + A +MF+++ RD+ SW
Sbjct: 144 SSLHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWT 202
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
+I + +AL L+ +M + + P+ ++ +C L+ LG ++ +++
Sbjct: 203 ALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRS 262
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLL 330
E D++V +A++D Y KC + AH FS + ++VSW+ LI GY+ S L
Sbjct: 263 GFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLY 322
Query: 331 IELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
I ++ +G N + VL + +LL + G E + +VL K GL+S
Sbjct: 323 IGMINVGLATNAIVATSVLPALGKLELL-------KQGKEMHNFVL--------KEGLMS 367
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
D VV + + +Y G E + DI+ WN +I G
Sbjct: 368 D-------------VVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVG 414
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
D++ F+ + A P+ T VS+L C+++ L G +HG + K+ + + V
Sbjct: 415 DFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGL-GLNVSVG 473
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
N LIDMY KCG + K+F +M RNV T+ +ISA G +G ++ L + +M+ G +
Sbjct: 474 NSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNR 533
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
P++V I++L+AC H GL+ G L+ M YG+EP M+HY C+VDL+ R G L A K
Sbjct: 534 PNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYK 593
Query: 631 IITTMPFPPNALIWRTFLEGCQ 652
IT MP P+A ++ + L C+
Sbjct: 594 FITRMPMTPDANVFGSLLGACR 615
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 150/614 (24%), Positives = 291/614 (47%), Gaps = 40/614 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+P + ++++N+I+ G+ A+ + M+ G P +T+ +L +C SL+ ++
Sbjct: 93 LPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLG 152
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + +G A+ +V A++ ++ + G +++ +FE+MP + L +W +++ +
Sbjct: 153 RWVHETM-HGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWN 211
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVG-VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + LF ++ RSE + +S V ++ + ++ G + +++GF+ +L V
Sbjct: 212 GECLEALLLFRKM-RSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYV 270
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N++++MY +C A ++F + DVVSW+T+I +++ + ++ +LY+ M +
Sbjct: 271 SNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGL 330
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N V+ + L+ GK +H V+K L DV VGSAL+ YA C +++ A
Sbjct: 331 ATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAES 390
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F S+K+I+ WN++I+GY ++ F + +RPN T +L + Q+
Sbjct: 391 IFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSIL--PICTQM 448
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
L R G E + YV KSGL LN V N + +Y++
Sbjct: 449 GAL-----RQGKEIHGYV--------TKSGL---------GLN----VSVGNSLIDMYSK 482
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G K+ Q+ ++ ++N +I+AC +G ++ L ++ M+ P+ TF+SL
Sbjct: 483 CGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISL 542
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM---T 534
LSACS L G L+ + I + + ++D+ G+ G + + K M
Sbjct: 543 LSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTP 602
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
D NV + +L+ A L+ + L + L K D +L+ G E M
Sbjct: 603 DANV--FGSLLGACRLHNKVE--LTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMS 658
Query: 595 LFERMNRSYGVEPE 608
M + G+E +
Sbjct: 659 KVRSMIKDKGLEKK 672
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 189/637 (29%), Positives = 295/637 (46%), Gaps = 36/637 (5%)
Query: 32 MINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGC 90
M+ RG T+ F L++ +L+ + Q A ++ NGL D T L
Sbjct: 1 MLYRGIASTRNLFLTLINRVSTLHQLN--QTHAQIILNGLH-NDLVTVTKLTHKLSHLKA 57
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG 150
+D+ +F +P L +N ++ F + + L+ L R L +F
Sbjct: 58 IDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHL-RKSTPLEPDNFTYAF-V 115
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
+S L G +H I GF +L V +++V YF+ + + +A K+F + RD V W
Sbjct: 116 ISGASSLGLGLLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLW 175
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
NT++ L ++ F +A+ ++ M + + TT V+ A LQ+ LG I +K
Sbjct: 176 NTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMK 235
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFL 329
+V + L Y+KC +E A L F +I ++VS+NA+I GY + + +S+ L
Sbjct: 236 VGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRL 295
Query: 330 LIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
ELL G + N + ++ F L L I
Sbjct: 296 FKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCI------------------------- 330
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
F T + + + +Y+R + L + + SWN +I+ A N
Sbjct: 331 ---HGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQN 387
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
G ++ + LF+ M+ + P+ T S+LSAC++L L+LG +H LI + E S+ FV
Sbjct: 388 GLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINR-ESFESNIFV 446
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
LIDMY KCGSI + ++F+ M ++N +TW A+IS GL+G+ AL F EM
Sbjct: 447 STALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRV 506
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
P V ++VL AC H GLVREG E+F M +G EP +HY C+VDLL R G+L +A
Sbjct: 507 SPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKAL 566
Query: 630 KIITTMPFPPNALIWRTFLEGCQRCRIAKYDTLNSTK 666
I MP P +W L C + A L S K
Sbjct: 567 DFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDK 603
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 130/264 (49%), Gaps = 19/264 (7%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGA 59
PD +VS+N++IS Y+ E ++R+F ++ G + + GL+ PV
Sbjct: 271 PD--LVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLI------PVFFPFG 322
Query: 60 QLQASVLKNGLFCAD------AFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
L + +G FC + V TAL +Y R ++ +F++ KSL +WN+++
Sbjct: 323 HLHLTRCIHG-FCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMI 381
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
S + ++G E + LF E+ + EV + ++ + L G+ +H L+ + F+
Sbjct: 382 SGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFE 441
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ V+ +L++MY +C I A+++F + ++ V+WN +I +AL L+ M
Sbjct: 442 SNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEM 501
Query: 234 SVDIVFPNQTTFVYVINSC--AGL 255
V P TF+ V+ +C AGL
Sbjct: 502 LHSRVSPTGVTFLSVLYACSHAGL 525
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 96/173 (55%), Gaps = 2/173 (1%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQL 61
++++ S+N++IS Y++ G E A+ +F M P T +LS C L + +
Sbjct: 371 EKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKW 430
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
++ F ++ FV TAL+ +Y + G + E +F MP K+ VTWN+++S +G HG+
Sbjct: 431 VHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGY 490
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI-HGLVIKNGFD 173
+ + LF E++ S V+ T +F+ V++ S+ + G++I +V +GF+
Sbjct: 491 GHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFE 543
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
MP++N V++N++IS Y GY +AL +F M++ PT TF +L +C V EG
Sbjct: 470 MPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREG 529
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP 102
++ S++ + F ++ L GR G LD+ + MP
Sbjct: 530 DEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMP 573
>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
Length = 770
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 172/622 (27%), Positives = 305/622 (49%), Gaps = 53/622 (8%)
Query: 41 QFTFGGLLSCDSLNPVEGAQLQA-SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE 99
+FT L P+ G+Q+ S++ F V +L+ +Y + G + + +FE
Sbjct: 66 EFTVANALKACRGYPLLGSQIHGFSIIHE--FVNVTIVSNSLMNMYCKSGQFCKALCIFE 123
Query: 100 DMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF 159
++ +V+WN+++S ED C++ S V ++ V+ + F
Sbjct: 124 NLTHPDIVSWNTVLSGCQTS---EDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEAYF 180
Query: 160 --GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL 217
G Q+H ++K GFD E+ V N+L++MY + + A ++F++++ RD+VSWN +I
Sbjct: 181 LIGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGY 240
Query: 218 AESENFG-KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
++ +G +A+ ++L+M + ++ +F +++C +N L + IH IK E
Sbjct: 241 SQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKH 300
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
V V + L+ Y KC +E A L F ++ +N+VSW +I S ++ E+
Sbjct: 301 VAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMI----SIDEAEAVSFFNEMRLD 356
Query: 337 GYRPNEFTFSHVLRS----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
G PN+ TF ++ + L Q +H + G+ + V S++T YAK + D
Sbjct: 357 GVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQD- 415
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+VK+ +L+ DI++WN +I+ HNG
Sbjct: 416 -------------------------------SVKVFQELKYQDIIAWNALISGFVHNGLC 444
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL--GSSLHGLIKKTEIISSDTFVC 510
+E + F + P+ Y+F S+L+A +++L G H I K + ++D V
Sbjct: 445 QEAIRAF-FSGLIESKPNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIKLGL-NTDPIVS 502
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
+ L+DMY K GSI S K+F E ++ WT +ISA +G + + F EM L +
Sbjct: 503 SALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVR 562
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
PD + +++LTAC G+V G LF M + Y +EP +HY C+VD+L R G L+EAE+
Sbjct: 563 PDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEPSAEHYSCLVDMLGRAGRLEEAER 622
Query: 631 IITTMPFPPNALIWRTFLEGCQ 652
+++ +P P + ++ L C+
Sbjct: 623 LMSHIPGGPGLSVLQSLLGACR 644
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/583 (27%), Positives = 285/583 (48%), Gaps = 66/583 (11%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE--- 57
PD +VS+N+++S C EDA M + G T+ +LS C VE
Sbjct: 128 PD--IVSWNTVLSG---CQTSEDAFSFACKMNSSGVVFDAVTYTTVLSFC--WRHVEAYF 180
Query: 58 --GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G QL + ++K G C + FVG AL+ +Y R G L E VFE+M + LV+WN+++S
Sbjct: 181 LIGLQLHSCIVKFGFDC-EVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISG 239
Query: 116 FGKHG-FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + G + + + +F ++ R + L SF + E++LE QIHGL IK +
Sbjct: 240 YSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEK 299
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ V+N L++ YF+C I A +F+++ R+VVSW T+I ++ E+E A+ + M
Sbjct: 300 HVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMI-SIDEAE----AVSFFNEMR 354
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+D V+PN TFV +I++ + + GK +H K V ++++ YAK +++
Sbjct: 355 LDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQ 414
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
+ F E+ ++I++WNALI G+ + +PN+++F +L + A
Sbjct: 415 DSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGLIESKPNQYSFGSILNAIGA 474
Query: 355 FQLLQL------HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ + L H II++G V +L+ YAK G I
Sbjct: 475 AEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSIC------------------ 516
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
E+ K+ + + +W +I+A A +GDY+ V+ F+ MR +
Sbjct: 517 --------------ESQKVFVETPQQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVR 562
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEI-ISSDTFVCNMLIDMYGKCGSIGSS 526
PD+ TF+S+L+AC + + +G L G ++K +I S++ + C L+DM G+ G + +
Sbjct: 563 PDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEPSAEHYSC--LVDMLGRAGRLEEA 620
Query: 527 VKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
++ + + + +L+ A ++G +R + EME
Sbjct: 621 ERLMSHIPGGPGLSVLQSLLGACRVHGNVDMGERVADALMEME 663
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 127/567 (22%), Positives = 248/567 (43%), Gaps = 82/567 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCG-YVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEG 58
M R++VS+N++IS YS+ G Y +A+ MFL M G E + +F +S C +E
Sbjct: 225 MKTRDLVSWNAMISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLEL 284
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
A+ + V L+ Y + +++ VF++M +++V+W +++SI
Sbjct: 285 ARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMISIDEA 344
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + F E+ V + +FVG+IH ++ + + G+ +HG K GF + V
Sbjct: 345 -----EAVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNV 399
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NS++ MY + + + K+F++++ +D+++WN +I + +A+ + ++
Sbjct: 400 CNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGLIESK 459
Query: 239 FPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
PNQ +F ++N+ ++ L G+ H+++IK L D V SAL+D YAK ++ +
Sbjct: 460 -PNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICES 518
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF 355
F E ++ +W +I YA S+ E+ +L RP+ TF +L +
Sbjct: 519 QKVFVETPQQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRR 578
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
++ + C ++ GS++ Y I + + + +
Sbjct: 579 GMVDMGC-----------HLFGSMVKDY----------------QIEPSAEHYSCLVDML 611
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
R G+ E +L+S + G VL+
Sbjct: 612 GRAGRLEEAERLMSHIP----------------GGPGLSVLQ------------------ 637
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
SLL AC N+ +G + + + E S ++V ++ ++Y + G K+ M
Sbjct: 638 SLLGACRVHGNVDMGERVADALMEMEPTESGSYV--LMSNLYAEIGKWEMVAKVRKRMRV 695
Query: 536 RNV-----ITWT---ALISALGLNGFA 554
+ V +W + S+L L+GF+
Sbjct: 696 KGVKKEVGFSWVDVGGIDSSLSLHGFS 722
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 179/417 (42%), Gaps = 51/417 (12%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
++ T + +C G +LG IH I + V ++L++ Y K A F
Sbjct: 65 DEFTVANALKACRGY--PLLGSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIF 122
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQ 356
+++ +IVSWN ++ G ++S + ++ G + T++ VL R A+
Sbjct: 123 ENLTHPDIVSWNTVLSG--CQTSEDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEAYF 180
Query: 357 L--LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
L LQLH I++ G+ D FV N + +
Sbjct: 181 LIGLQLHSCIVKFGF---------------------DCEVFV-----------GNALISM 208
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK-EVLELFKYMRAARIYPDNYT 473
Y+R G E ++ +++ D+VSWN +I+ + G Y E + +F M + D +
Sbjct: 209 YSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFLQMFRGGMELDRIS 268
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F S +SAC NL L +HGL KT V N+LI Y KC I + +F M
Sbjct: 269 FTSAVSACGYEKNLELARQIHGLSIKTR-HEKHVAVSNVLISTYFKCQVIEDARLVFQNM 327
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+RNV++WT +IS A+ F EM G P+ V + ++ A G LV +G
Sbjct: 328 NERNVVSWTTMISID-----EAEAVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQG- 381
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++ G + + + ++ + ++ ++++ K+ + + + + W + G
Sbjct: 382 KMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKY-QDIIAWNALISG 437
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 7/235 (2%)
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+L+FQ+++ H L + + V +L L S F + +N +
Sbjct: 46 NLSFQIIKEHLLSGFINNIDEFTVANALKACRGYPLLGSQIHGFSIIHEFVNVTIVSNSL 105
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y ++GQ+ + + + L PDIVSWN V++ C + D M ++ + D
Sbjct: 106 MNMYCKSGQFCKALCIFENLTHPDIVSWNTVLSGCQTSED---AFSFACKMNSSGVVFDA 162
Query: 472 YTFVSLLSACSKLCN--LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
T+ ++LS C + +G LH I K + FV N LI MY + G + + ++
Sbjct: 163 VTYTTVLSFCWRHVEAYFLIGLQLHSCIVKFG-FDCEVFVGNALISMYSRWGHLVEARRV 221
Query: 530 FNEMTDRNVITWTALISALGLNG-FAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
F EM R++++W A+IS G + A+ F +M G + DR++ + ++AC
Sbjct: 222 FEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSAC 276
>gi|147801011|emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]
Length = 711
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 270/535 (50%), Gaps = 43/535 (8%)
Query: 122 VEDCMFLFCELVR--SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
E LF E V+ ++ L + G++ +++ + G IH +I NGF +L +
Sbjct: 132 TESARELFTEFVKDWNKQKLESKYYEGIL--CIDKKAKKQGHLIHTHLITNGFGSDLHLN 189
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
L+ Y + + +A +F + R VVSW ++ +++ F KA L+ M V
Sbjct: 190 TKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVK 249
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
NQ T+ + +C L+ +G + + K ++FV SALVDF++KC +E A
Sbjct: 250 ANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYL 309
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLL 358
F + +++VSWNA+I GYA + F + +L+ G P+ +T VLR+S L
Sbjct: 310 FGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGL 369
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q+H +I ++GY +Y+ V G L+ +YAK+G + +A ++ + ++
Sbjct: 370 IIANQIHGIITQLGYGSYDIVTGLLINAYAKNG------SLRSAKDLRKGML-------- 415
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK-EVLELFKYMRAARIYPDNYT 473
+ D+ S +I AH G Y + L+LFK M I D+
Sbjct: 416 ------------------KKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVI 457
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
S+L+ C+ L + ALG+ +H K + S D + N LIDMY K G I + + F+EM
Sbjct: 458 LCSMLNICANLASFALGTQIHAFALKYQ-PSYDVAMGNALIDMYAKSGEIEDAKRAFDEM 516
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++NVI+WT+LIS +G+ A+ +++ME GFKP+ V +++L AC H GL EG
Sbjct: 517 EEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGC 576
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
E F M Y ++P +HY C+VDL R G L+EA ++ + NA +W L
Sbjct: 577 ECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAIL 631
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 185/353 (52%), Gaps = 5/353 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
MP+R+VVS+ +++S YS+ G E A +F M + G + QFT+G L +C SL ++ G
Sbjct: 212 MPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMG 271
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+Q + K G F + FV +AL+ + + G +++ +F M + +V+WN+++ +
Sbjct: 272 IQVQGCIQK-GRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAV 330
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
GF +D +F ++R + + V+ + L QIHG++ + G+ +V
Sbjct: 331 QGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIV 390
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG-KALELYLRMSVDI 237
L+N Y + + SA+ + K + +D+ S +I A + AL+L+ M+
Sbjct: 391 TGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMN 450
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ + ++N CA L + LG IHA +K DV +G+AL+D YAK +E A
Sbjct: 451 IGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAK 510
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL 349
F E+ KN++SW +LI GYA ++ L ++ G++PN+ TF +L
Sbjct: 511 RAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLL 563
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 236/520 (45%), Gaps = 46/520 (8%)
Query: 44 FGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR 103
+ G+L D +G + ++ NG F +D + T L+ Y + G + +VF+ MP
Sbjct: 156 YEGILCIDKKAKKQGHLIHTHLITNG-FGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPE 214
Query: 104 KSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI 163
+S+V+W ++VS + ++G E LF ++ V + ++ + ++ + L+ G Q+
Sbjct: 215 RSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQV 274
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
G + K F L V ++LV+ + +C + A +F + RDVVSWN +IG A
Sbjct: 275 QGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFA 334
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
+ ++ M + P+ T V+ + A I+ IH + + V L
Sbjct: 335 DDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLL 394
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS--SPTSIFLLIELLQLGYRPN 341
++ YAK +L A + K++ S ALI GYA + S ++ L E+ Q+ +
Sbjct: 395 INAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMD 454
Query: 342 EFTFSHVLR--SSLA-FQL-LQLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFV 396
+ +L ++LA F L Q+H ++ +Y+ +G +L+ YAKSG I DA
Sbjct: 455 DVILCSMLNICANLASFALGTQIHAFALKY-QPSYDVAMGNALIDMYAKSGEIEDA---- 509
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
RA ++E +++SW +I+ A +G +
Sbjct: 510 -----KRA-----------------------FDEMEEKNVISWTSLISGYAKHGYGHMAV 541
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG-SSLHGLIKKTEII-SSDTFVCNMLI 514
L+K M + P++ TF+SLL ACS A G + ++ K I ++ + C ++
Sbjct: 542 SLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSC--MV 599
Query: 515 DMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGF 553
D++ + G + + + ++ N W A++ A + G+
Sbjct: 600 DLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGY 639
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 33/134 (24%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLN-PVEG 58
M ++NV+S+ S+IS Y++ GY A+ ++ M ++GF+P TF LL +C EG
Sbjct: 516 MEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEG 575
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ C + +V+ + PR ++ +V +F +
Sbjct: 576 CE-----------------------------CFNNMVNKYNIKPRAE--HYSCMVDLFAR 604
Query: 119 HGFVEDCMFLFCEL 132
G +E+ L C++
Sbjct: 605 QGLLEEAYNLLCKI 618
>gi|334187347|ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g39952, mitochondrial; Flags: Precursor
gi|332661744|gb|AEE87144.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 775
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 184/659 (27%), Positives = 317/659 (48%), Gaps = 46/659 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
R++ +NSII A+ G +L F M+ G P FT ++S C L G +
Sbjct: 88 RDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFV 147
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
VLK+G F + VG + + Y + G L + VF++MP + +V W +I+S ++G
Sbjct: 148 HGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGE 207
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGL---SNEQDLEFGEQIHGLVIKNGFDYELLV 178
E + C++ + + + + + G SN L+ G +HG +KNG V
Sbjct: 208 SEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFV 267
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+S+ + Y + A F+++ D+ SW +II +LA S + ++ +++ M +
Sbjct: 268 QSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGM 327
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ +IN + GK+ H VI++ D V ++L+ Y K + L A
Sbjct: 328 HPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEK 387
Query: 299 CFSEISNK-NIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRS--SLA 354
F IS + N +WN ++ GY K I L ++ LG + + + V+ S +
Sbjct: 388 LFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIG 447
Query: 355 FQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
LL LHC +++ T+L++ +VV N +
Sbjct: 448 AVLLGKSLHCYVVK------------------------------TSLDLTISVV--NSLI 475
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G ++ + + ++++WN +IA+ H ++ + LF M + P +
Sbjct: 476 DLYGKMGDLTVAWRMFCEAD-TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSI 534
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T V+LL AC +L G +H I +TE + + LIDMY KCG + S ++F+
Sbjct: 535 TLVTLLMACVNTGSLERGQMIHRYITETEH-EMNLSLSAALIDMYAKCGHLEKSRELFDA 593
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
++ + W +IS G++G + A+ F +ME KP +A+L+AC H GLV +G
Sbjct: 594 GNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQG 653
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+LF +M++ Y V+P + HY C+VDLL R G+L+EAE + +MPF P+ +IW T L C
Sbjct: 654 KKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSC 711
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 149/610 (24%), Positives = 266/610 (43%), Gaps = 44/610 (7%)
Query: 50 CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
CD +E + +++ G + FV + L+ Y +G + VF + R+ + W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
NSI+ +G + F ++ S + + V+ + G +HGLV+K
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 170 N-GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
+ GFD V S V Y +C + A +F ++ RDVV+W II ++ L
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 229 LYLRM---SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
+M D+ PN T +C+ L G+ +H +KN L FV S++
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFS 273
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFT 344
FY+K N A+L F E+ ++++ SW ++I A S S + E+ G P+
Sbjct: 274 FYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVV 333
Query: 345 FSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
S ++ + L Q H +IR + V SL++ Y K L+S A ++
Sbjct: 334 ISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRIS 393
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
E + +WN ++ + + +ELF+
Sbjct: 394 -------------------------------EEGNKEAWNTMLKGYGKMKCHVKCIELFR 422
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
++ I D+ + S++S+CS + + LG SLH + KT + + + V N LID+YGK
Sbjct: 423 KIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVV-NSLIDLYGKM 481
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
G + + ++F E D NVITW A+I++ +++A+ F M FKP + L+ +L
Sbjct: 482 GDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLL 540
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
AC + G + G ++ R E + ++D+ + GHL+++ ++ +
Sbjct: 541 MACVNTGSLERG-QMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN-QKD 598
Query: 641 ALIWRTFLEG 650
A+ W + G
Sbjct: 599 AVCWNVMISG 608
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 149/643 (23%), Positives = 286/643 (44%), Gaps = 76/643 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE---PTQFTFG-GLLSCDSLNPV 56
MPDR+VV++ +IIS + + G E L M + G + P T G +C +L +
Sbjct: 187 MPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGAL 246
Query: 57 -EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
EG L +KNGL + FV +++ Y + G E F ++ + + +W SI++
Sbjct: 247 KEGRCLHGFAVKNGL-ASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIAS 305
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ G +E+ +F E+ + +I+ L + G+ HG VI++ F +
Sbjct: 306 LARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLD 365
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V NSL++MY + + AEK+F + E + +WNT++ + + K +EL+ ++
Sbjct: 366 STVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQ 425
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ + + VI+SC+ + +LGKS+H V+K +L+ + V ++L+D Y K +L
Sbjct: 426 NLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLT 485
Query: 295 GAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F E ++ N+++WNA+I Y + S +I L ++ ++P+ T +L + +
Sbjct: 486 VAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACV 544
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L+ +I R ++T + + +
Sbjct: 545 NTGSLERGQMIHR----------------------------YITETEHEMNLSLSAALID 576
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y + G ++ +L + D V WN++I+ +GD + + LF M + + P T
Sbjct: 577 MYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPT 636
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F++LLSAC+ GL+++ + + +K+
Sbjct: 637 FLALLSACTHA----------GLVEQGKKL----------------------FLKMHQYD 664
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
N+ ++ L+ L +G + A M F PD V +L++C G G+
Sbjct: 665 VKPNLKHYSCLVDLLSRSGNLEEAESTVMSMP---FSPDGVIWGTLLSSCMTHGEFEMGI 721
Query: 594 ELFERMNRSYGVEPEMDHYHCVV-DLLVRYGHLKEAEKIITTM 635
+ E R+ +P+ D Y+ ++ ++ G +EAE+ M
Sbjct: 722 RMAE---RAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMM 761
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 26/181 (14%)
Query: 484 LCNLALGSSLHGLIKKTEII-----SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
LC+ +L SL L K +I S + FV + LI Y G S ++F+ +T R++
Sbjct: 33 LCDQSL--SLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDI 90
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-----HGGLVREGM 593
W ++I A NG R+L F M G PD V++AC H G G+
Sbjct: 91 FLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGL 150
Query: 594 EL----FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
L F+R N + G V + G L++A + MP + + W +
Sbjct: 151 VLKHGGFDR-NTAVGAS--------FVYFYSKCGFLQDACLVFDEMP-DRDVVAWTAIIS 200
Query: 650 G 650
G
Sbjct: 201 G 201
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/504 (30%), Positives = 266/504 (52%), Gaps = 17/504 (3%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCA-----GIWSAEKMFKDVEIRDVVSWNTIIG 215
+Q+H +++ G ++ S ++ CA + A K+F + ++ +WNT+I
Sbjct: 47 KQLHAHMLRTGLFFD---PPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIR 103
Query: 216 ALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
A A S + L ++++M FPN TF +VI + + + + G++IH V+K +
Sbjct: 104 AFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFG 163
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
D+F+ ++L+ FY+ +L+ A+L FS+I K+IVSWN++I G+ SP L + +
Sbjct: 164 SDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRM 223
Query: 335 QL-GYRPNEFTFSHVLRS---SLAFQLLQLHC-LIIRMGYENYEYVLGSLMTSYAKSGLI 389
++ RPN T VL + + + + C I R G + + +++ Y K G +
Sbjct: 224 KMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSL 283
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
DA + V +I G Y + G Y+ ++ + R DI +WN +I++ N
Sbjct: 284 EDARRLFDKMEEKDIVSWTTMIDG-YAKVGDYDAARRVFDVMPREDITAWNALISSYQQN 342
Query: 450 GDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
G KE L +F+ ++ + P+ T S L+AC++L + LG +H IKK + I +
Sbjct: 343 GKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKK-QGIKLNFH 401
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+ LIDMY KCG + ++++F + R+V W+A+I+ L ++G + A++ F +M+
Sbjct: 402 ITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETK 461
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
KP+ V +L AC H GLV EG F +M YGV P HY C+VD+L R G L+EA
Sbjct: 462 VKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEA 521
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
++I MP P+A +W L C+
Sbjct: 522 VELIEKMPIVPSASVWGALLGACR 545
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 135/528 (25%), Positives = 246/528 (46%), Gaps = 52/528 (9%)
Query: 60 QLQASVLKNGLF-----CADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
QL A +L+ GLF F AL LD VF+ +PR +L TWN+++
Sbjct: 48 QLHAHMLRTGLFFDPPSATKLFTACAL----SSPSSLDYACKVFDQIPRPNLYTWNTLIR 103
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
F + +F +++ S +F VI + L G+ IHG+V+K F
Sbjct: 104 AFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFG 163
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+L ++NSL++ Y + SA +F + +D+VSWN++I + + +AL+L+ RM
Sbjct: 164 SDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRM 223
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
++ PN+ T V V+++CA + G+ + +N ++ ++ + +A++D Y KC +L
Sbjct: 224 KMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSL 283
Query: 294 EGAHLCFSEISNKNIVSWNALILGYAS---------------KSSPTSIFLLIELLQLGY 338
E A F ++ K+IVSW +I GYA + T+ LI Q
Sbjct: 284 EDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNG 343
Query: 339 RPNEFTFSHVLRSSLA-FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
+P E +LA F+ LQL+ + E L S + + A+ G + L
Sbjct: 344 KPKE---------ALAIFRELQLN-----KNTKPNEVTLASTLAACAQLGAMD--LGGWI 387
Query: 398 ALNIPRAVVPANI-----IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+ I + + N + +Y++ G + +++ +ER D+ W+ +IA A +G
Sbjct: 388 HVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHG 447
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE--IISSDTFVC 510
+ ++LF M+ ++ P+ TF +LL ACS + G ++ + S + C
Sbjct: 448 RAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYAC 507
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRA 557
++D+ G+ G + +V++ +M + W AL+ A + G + A
Sbjct: 508 --MVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELA 553
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 213/487 (43%), Gaps = 73/487 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLL--SCDSLNPVE 57
+P N+ ++N++I A++ L +F+ M++ P +TF ++ + + + +
Sbjct: 90 IPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLA 149
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + V+K F +D F+ +L+ Y G LD VF + K +V+WNS++S F
Sbjct: 150 GQAIHGMVMKAS-FGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFV 208
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G E+ + LF + + VGV+ + DLEFG + +NG D L+
Sbjct: 209 QGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLI 268
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
++N++++MY +C + A ++F +E +D+VSW T+I A+ ++ A ++ M +
Sbjct: 269 LSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPRED 328
Query: 238 VF--------------------------------PNQTTFVYVINSCAGLQNSILGKSIH 265
+ PN+ T + +CA L LG IH
Sbjct: 329 ITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIH 388
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SP 324
+ K ++ + + ++L+D Y+KC +LE A F + +++ W+A+I G A
Sbjct: 389 VYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGR 448
Query: 325 TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
+I L ++ + +PN TF+ +L+ + +
Sbjct: 449 AAIDLFSKMQETKVKPNAVTFT-------------------------------NLLCACS 477
Query: 385 KSGLISDALAFVTALNIPRAVVPAN----IIAGIYNRTGQYNETVKLLSQLE-RPDIVSW 439
SGL+ + F + VVP + + I R G E V+L+ ++ P W
Sbjct: 478 HSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVW 537
Query: 440 NIVIAAC 446
++ AC
Sbjct: 538 GALLGAC 544
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/555 (28%), Positives = 275/555 (49%), Gaps = 53/555 (9%)
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR--- 205
H L ++ +Q+H + G V+ LV++Y + + A K+F
Sbjct: 43 HLLRQCNGIQHSKQVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECYS 102
Query: 206 DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
+ + WN+II A +AL+LY +M V + TF ++ + + L + K++H
Sbjct: 103 NFLLWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLH 162
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT 325
V++ + + VG+ L+ YAK + ++ A F ++ K++VSWN ++ GYA
Sbjct: 163 CHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVN 222
Query: 326 SIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ------------------------- 359
+ ++L G PN T++ +L S L+
Sbjct: 223 GASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVL 282
Query: 360 --------------LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+H +++ G+ +Y + +L+T Y K G + DA + + + +
Sbjct: 283 SVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKV-KNL 341
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLER--------PDIVSWNIVIAACAHNGDYKEVLE 457
V N + + +G Y++ ++LLSQLE+ P++++W+ +I A G +E LE
Sbjct: 342 VSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEESLE 401
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
+F+ M+ A + ++ T S+LS C+ L L LG +HG + + + + V N LI+MY
Sbjct: 402 VFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARM-DDNVLVGNGLINMY 460
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
KCGS +F ++ +R+ I+W ++I+ G +G + AL F M G++PD V I
Sbjct: 461 TKCGSFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFNHMIKSGYRPDGVTFI 520
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
A L+AC H GLV EG LF +M +++ +EPE++HY C+VDLL R G ++EA II MP
Sbjct: 521 AALSACSHAGLVAEGHWLFSQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKGMPM 580
Query: 638 PPNALIWRTFLEGCQ 652
PNA IW + L C+
Sbjct: 581 EPNAYIWSSLLNSCR 595
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 192/420 (45%), Gaps = 82/420 (19%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS----LNPVEGAQ 60
N + +NSII A GY +AL+++ M N G FTF LL S N +
Sbjct: 103 NFLLWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCK--N 160
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF---- 116
L V++ G F VG L+G+Y + +D+ VF+ M KS+V+WN++VS +
Sbjct: 161 LHCHVVQFG-FQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNY 219
Query: 117 -------------------------------GKHGFVEDCMFLFCELVRSEVALTESSFV 145
+ G +E+ M LFC++ V T
Sbjct: 220 DVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLA 279
Query: 146 GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR 205
V+ ++ L G+ IHG ++K GF+ L N+L+ +Y + G+ AEK+F +++++
Sbjct: 280 VVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVK 339
Query: 206 DVVSWNTIIGALAESENFGKALEL------------------------------------ 229
++VSWN +I + AES + KALEL
Sbjct: 340 NLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEES 399
Query: 230 ---YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
+ +M + V N T V++ CA L LG+ +H VI+ ++ +V VG+ L++
Sbjct: 400 LEVFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARMDDNVLVGNGLINM 459
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTF 345
Y KC + + + F ++ N++ +SWN++I GY + ++ +++ GYRP+ TF
Sbjct: 460 YTKCGSFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFNHMIKSGYRPDGVTF 519
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 132/545 (24%), Positives = 240/545 (44%), Gaps = 64/545 (11%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP---RKSLVTWNSIVSIF 116
Q+ ++ + G +C+ AFV L+ +Y R+G + + VF P + + WNSI+
Sbjct: 56 QVHSATVVTGAYCS-AFVSARLVSIYSRYGLVSDARKVFGSAPFECYSNFLLWNSIIRAN 114
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
HG+ + + L+ ++ V +F ++ SN + +H V++ GF L
Sbjct: 115 VYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHL 174
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V N L+ MY + + A K+F + I+ VVSWNT++ A + + A ++ +M ++
Sbjct: 175 HVGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELE 234
Query: 237 IVFPNQTTFVYVINS-----------------------------------CAGLQNSILG 261
V PN T+ +++S CA L G
Sbjct: 235 GVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSG 294
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-S 320
+ IH ++K +F +AL+ Y K + A F E+ KN+VSWNALI +A S
Sbjct: 295 QMIHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALISSFAES 354
Query: 321 KSSPTSIFLLIELLQL----GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
++ LL +L ++ +PN T+S ++ + L + + R + L
Sbjct: 355 GVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEESLEVFR------KMQL 408
Query: 377 GSLMTSYAKSGLISDALAFVTALN--------IPRAVVPANIIAG-----IYNRTGQYNE 423
++ + + A + ALN + RA + N++ G +Y + G +
Sbjct: 409 ANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARMDDNVLVGNGLINMYTKCGSFKP 468
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
+ +LE D +SWN +IA +G K+ L F +M + PD TF++ LSACS
Sbjct: 469 GFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFNHMIKSGYRPDGVTFIAALSACSH 528
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWT 542
+A G L +++ I + ++D+ G+ G + + I M + N W+
Sbjct: 529 AGLVAEGHWLFSQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKGMPMEPNAYIWS 588
Query: 543 ALISA 547
+L+++
Sbjct: 589 SLLNS 593
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 137/292 (46%), Gaps = 42/292 (14%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQL 61
+ N V++ S++S+++RCG++E+ + +F M +G PT +LS C L + Q+
Sbjct: 237 EPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQM 296
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ G F F AL+ LYG+ G + + +F +M K+LV+WN+++S F + G
Sbjct: 297 IHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALISSFAESGV 356
Query: 122 VEDCMFLFCELVR----SEVALTESSFVGVIHGLSN----EQDLE--------------- 158
+ + L +L + E+ ++ +I G ++ E+ LE
Sbjct: 357 YDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEESLEVFRKMQLANVKANSV 416
Query: 159 ----------------FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
G ++HG VI+ D +LV N L+NMY +C +F+ +
Sbjct: 417 TIASVLSICAMLAALNLGREMHGHVIRARMDDNVLVGNGLINMYTKCGSFKPGFMVFEKL 476
Query: 203 EIRDVVSWNTIIGALAESENFGK-ALELYLRMSVDIVFPNQTTFVYVINSCA 253
E RD +SWN++I + GK AL + M P+ TF+ +++C+
Sbjct: 477 ENRDSISWNSMIAGYG-THGLGKDALATFNHMIKSGYRPDGVTFIAALSACS 527
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPV-EG 58
+ +R+ +S+NS+I+ Y G +DAL F +MI G+ P TF L +C V EG
Sbjct: 476 LENRDSISWNSMIAGYGTHGLGKDALATFNHMIKSGYRPDGVTFIAALSACSHAGLVAEG 535
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVS 114
L + + +N + ++ L GR G ++E ++ + MP + W+S+++
Sbjct: 536 HWLFSQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKGMPMEPNAYIWSSLLN 592
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 182/617 (29%), Positives = 300/617 (48%), Gaps = 32/617 (5%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
E +L +K G F + F+ L+ +Y R G L +F++M ++LVTW ++S +
Sbjct: 117 EARELHLQSIKYG-FVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 175
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL--SNEQDLEFGEQIHGLVIKNGFDY 174
++G ++ F ++VR+ +F + S + G QIHGL+ K +
Sbjct: 176 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGS 235
Query: 175 ELLVANSLVNMYFQC-AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+++V N L++MY C A +F + IR+ +SWN+II + + A +L+ M
Sbjct: 236 DVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSM 295
Query: 234 SVDIV----FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL-ECDVFVGSALVDFYA 288
+ + PN + + + G+ +HA VI+ L + V +G+ LV+ YA
Sbjct: 296 QKEGLGFSFKPNDAFSEFSVLE----EGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYA 351
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGY----ASKSSPTSIFLLIELLQLGYRP---- 340
K + A F + K+ VSWN+LI G S+ + L+ E Q+ +
Sbjct: 352 KSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGA 411
Query: 341 ---NEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
+E + S ++ L Q+++ + R+ + N + SL + AL
Sbjct: 412 LSDSEASVSQAVKYFL--QMMRGGWGLSRVTFINILSAVSSLSLHEVSHQI--HALVLKY 467
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVL 456
L+ A+ N + Y + G+ NE K+ +++ E D VSWN +I+ HN + +
Sbjct: 468 CLSDDTAI--GNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAM 525
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
+L +M D++TF ++LSAC+ + L G +H + + SD V + L+DM
Sbjct: 526 DLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRA-CLESDVVVGSALVDM 584
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y KCG I + + F M RNV +W ++IS +G ++AL+ F M G PD V
Sbjct: 585 YSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTF 644
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+ VL+AC H G V EG E F+ M+ Y + P ++H+ C+VDLL R G L E I +MP
Sbjct: 645 VGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMP 704
Query: 637 FPPNALIWRTFLEGCQR 653
PN LIWRT L C R
Sbjct: 705 MKPNVLIWRTVLGACCR 721
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 161/621 (25%), Positives = 280/621 (45%), Gaps = 95/621 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-- 57
M +RN+V++ +IS Y++ G ++A F M+ GF P + FG L +C P
Sbjct: 160 MSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCK 219
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLD---EVVSVFEDMPRKSLVTWNSIV 113
G Q+ + K + +D V L+ +YG CLD + SVF+ + ++ ++WNSI+
Sbjct: 220 LGVQIHGLISKT-RYGSDVVVCNVLISMYG--SCLDSANDARSVFDGIGIRNSISWNSII 276
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF- 172
S++ + G LF + + + + E+ G ++H VI+ G
Sbjct: 277 SVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLN 336
Query: 173 DYELLVANSLVNMYFQCAGI-----------------WS--------------AEKMFKD 201
D ++ + N LVNMY + I W+ A +MF
Sbjct: 337 DNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSL 396
Query: 202 VEIRDVVSWNTIIGALAESE-NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
+ D VSWN++IGAL++SE + +A++ +L+M ++ TF+ ++++ + L +
Sbjct: 397 MPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEV 456
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS-NKNIVSWNALILGYA 319
IHA V+K L D +G+AL+ Y KC + F+ +S ++ VSWN++I GY
Sbjct: 457 SHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 516
Query: 320 SKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEY 374
++ L+ ++Q G R + FTF+ +L + + L ++H IR E+
Sbjct: 517 HNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVV 576
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL--- 431
V +L+ Y+K G I A F + + R V N + Y R G + +KL +++
Sbjct: 577 VGSALVDMYSKCGRIDYASRFFELMPL-RNVYSWNSMISGYARHGHGEKALKLFTRMMLD 635
Query: 432 -ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+ PD V++ V++AC+H G +E E FK M
Sbjct: 636 GQPPDHVTFVGVLSACSHVGFVEEGFEHFKSM---------------------------- 667
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISAL- 548
S ++ L + E F C ++D+ G+ G + N M + NV+ W ++ A
Sbjct: 668 SEVYRLSPRVE-----HFSC--MVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACC 720
Query: 549 ---GLNG-FAQRALEKFREME 565
G N +RA E E+E
Sbjct: 721 RANGRNTELGRRAAEMLLELE 741
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 134/508 (26%), Positives = 238/508 (46%), Gaps = 17/508 (3%)
Query: 158 EFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL 217
E ++H IK GF L ++N+L+N+Y + + SA+K+F ++ R++V+W +I
Sbjct: 116 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 175
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSC--AGLQNSILGKSIHAKVIKNALEC 275
++ +A + M PN F + +C +G LG IH + K
Sbjct: 176 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGS 235
Query: 276 DVFVGSALVDFYAKC-DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
DV V + L+ Y C D+ A F I +N +SWN++I Y+ + S + L +
Sbjct: 236 DVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSM 295
Query: 335 Q-----LGYRPNE-FTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS-LMTSYAKSG 387
Q ++PN+ F+ VL + ++H +IR G + + +G+ L+ YAKSG
Sbjct: 296 QKEGLGFSFKPNDAFSEFSVLEEGRR-KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSG 354
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
I+DA + + +V ++I+G+ ++ + ++ S + D VSWN VI A +
Sbjct: 355 AIADACSVFELMVEKDSVSWNSLISGL-DQNECSEDAAEMFSLMPEYDQVSWNSVIGALS 413
Query: 448 HN-GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
+ + ++ F M TF+++LSA S L + +H L+ K +S D
Sbjct: 414 DSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKY-CLSDD 472
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREME 565
T + N L+ YGKCG + KIF M++ R+ ++W ++IS N +A++ M
Sbjct: 473 TAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMM 532
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G + D +L+AC + GME+ R+ +E ++ +VD+ + G +
Sbjct: 533 QKGQRLDSFTFATILSACASVATLERGMEVHACGIRAC-LESDVVVGSALVDMYSKCGRI 591
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQR 653
A + MP N W + + G R
Sbjct: 592 DYASRFFELMPL-RNVYSWNSMISGYAR 618
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 190/460 (41%), Gaps = 87/460 (18%)
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+F + TF +IN G S + +H + IK ++F+ + L++ Y + +L A
Sbjct: 95 LFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQ 154
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS----- 351
F E+SN+N+V+W LI GY P + ++++ G+ PN + F LR+
Sbjct: 155 KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 214
Query: 352 -SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
S +Q+H LI + Y + V L++ Y + AN
Sbjct: 215 PSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGS------------------CLDSAND 256
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI--- 467
+++ G N +SWN +I+ + GD +LF M+ +
Sbjct: 257 ARSVFDGIGIRNS-------------ISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFS 303
Query: 468 -YP-DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
P D ++ S+L + G +H + +T + + + N L++MY K G+I
Sbjct: 304 FKPNDAFSEFSVLEEGRR-----KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIAD 358
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ +F M +++ ++W +LIS L N ++ A E F M + D+V+ +V+ A
Sbjct: 359 ACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMP----EYDQVSWNSVIGALSD 414
Query: 586 G-GLVREGMELFERMNR-SYGVEP----------------EMDHY-------HCVVD--- 617
V + ++ F +M R +G+ E+ H +C+ D
Sbjct: 415 SEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTA 474
Query: 618 ----LLVRY---GHLKEAEKIITTMPFPPNALIWRTFLEG 650
LL Y G + E EKI M + + W + + G
Sbjct: 475 IGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG 514
>gi|255578455|ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530403|gb|EEF32291.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 718
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/576 (27%), Positives = 285/576 (49%), Gaps = 13/576 (2%)
Query: 85 YGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
YG+ CL + +F++MP++ +WN+I+ + + G+ E + LF ++ + V E +F
Sbjct: 102 YGKCECLKDARELFDEMPQRDGGSWNAIIKAYTQCGYAEKALGLFKDMNKEGVFANEITF 161
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
V+ S+ DL QIHGL++K GF +++ ++LV++Y +C + A MF ++E
Sbjct: 162 ASVLKSCSDVLDLSLSRQIHGLIVKCGFCGNVILGSALVDVYGKCKVMSEARLMFNEIEN 221
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+ V+WN I+ + N +A++++ +M V P TF + +C+ ++ G I
Sbjct: 222 CNDVTWNVIVRRYLDVGNEREAVKMFFKMFQTDVRPLNFTFSNALIACSAMRALNEGMQI 281
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSS 323
HA IK E D V S+L + YAKC LE A + F + +++++SW +++ YA S +
Sbjct: 282 HAFAIKIKFEEDEAVSSSLSNMYAKCGKLESARMIFDQHGSRDVISWTSMVSAYALSGRT 341
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSY 383
+ L ++ + + +RS + L CL+ R + LG L+
Sbjct: 342 REARELFEKMPEWSVVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVC 401
Query: 384 AKSGLISD------ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP-DI 436
A ISD A F+ ++ N + +Y + G Q+ + D
Sbjct: 402 AG---ISDVEMGKQAHGFIYRHGFSSCILVGNALLDMYGKCGNLRSARVWFYQMSQSRDN 458
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
+SWN ++ + A + ++ + +F M+ P +TF +LL+AC+ + L G +HG
Sbjct: 459 ISWNALLTSYARHHQSEQAMMIFGEMQ-WETKPSTFTFGTLLAACANIFALDQGKEIHGF 517
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
+ + + DT + L+DMY KC + ++ +FN R+VI W ++I NG +
Sbjct: 518 MIRNG-YNLDTVISGALVDMYSKCRCLSYALTVFNRAGSRDVILWNSIILGCCHNGRGKE 576
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
L+ F +ME G KPD V VL AC + G V+ +E F M+ V P ++HY C++
Sbjct: 577 VLKLFGQMEKEGVKPDHVTFHGVLLACMYEGHVKLAVEYFNSMSDKCCVIPRLEHYECMI 636
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+L RY + E + MPF P A + + C+
Sbjct: 637 ELFSRYRCMSRLENFVKGMPFDPTASMLIRVFDACK 672
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 176/644 (27%), Positives = 287/644 (44%), Gaps = 115/644 (17%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SC-DSLNPVEG 58
MP R+ S+N+II AY++CGY E AL +F M G + TF +L SC D L+
Sbjct: 118 MPQRDGGSWNAIIKAYTQCGYAEKALGLFKDMNKEGVFANEITFASVLKSCSDVLDLSLS 177
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ ++K G FC + +G+AL+ +YG+ + E +F ++ + VTWN IV +
Sbjct: 178 RQIHGLIVKCG-FCGNVILGSALVDVYGKCKVMSEARLMFNEIENCNDVTWNVIVRRYLD 236
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + +F ++ +++V +F + S + L G QIH IK F+ + V
Sbjct: 237 VGNEREAVKMFFKMFQTDVRPLNFTFSNALIACSAMRALNEGMQIHAFAIKIKFEEDEAV 296
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM----- 233
++SL NMY +C + SA +F RDV+SW +++ A A S +A EL+ +M
Sbjct: 297 SSSLSNMYAKCGKLESARMIFDQHGSRDVISWTSMVSAYALSGRTREARELFEKMPEWSV 356
Query: 234 ------------------SVDIVF--------PNQTTFVYVINSCAGLQNSILGKSIHAK 267
++D V + T ++N CAG+ + +GK H
Sbjct: 357 VSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVCAGISDVEMGKQAHGF 416
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS-NKNIVSWNALILGYASKSSPTS 326
+ ++ + VG+AL+D Y KC NL A + F ++S +++ +SWNAL+ YA
Sbjct: 417 IYRHGFSSCILVGNALLDMYGKCGNLRSARVWFYQMSQSRDNISWNALLTSYARHHQSEQ 476
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEYVLGSLMTS 382
++ +Q +P+ FTF +L + Q ++H +IR GY + G+L+
Sbjct: 477 AMMIFGEMQWETKPSTFTFGTLLAACANIFALDQGKEIHGFMIRNGYNLDTVISGALVDM 536
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
Y+K +S AL ++NR G D++ WN +
Sbjct: 537 YSKCRCLSYALT-------------------VFNRAGSR-------------DVILWNSI 564
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
I C HNG KEVL+LF M + PD+ TF +L AC
Sbjct: 565 ILGCCHNGRGKEVLKLFGQMEKEGVKPDHVTFHGVLLAC--------------------- 603
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT-----WTALISALGLNGFAQRA 557
MY G + +V+ FN M+D+ + + +I R
Sbjct: 604 -------------MYE--GHVKLAVEYFNSMSDKCCVIPRLEHYECMIELFSRYRCMSR- 647
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
LE F ++ + F P LI V AC+ G R + E++N+
Sbjct: 648 LENF--VKGMPFDPTASMLIRVFDACKEHGPSRFRKWVAEQLNK 689
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 245/514 (47%), Gaps = 24/514 (4%)
Query: 99 EDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLE 158
+ P KS N+I++ + + LF S ++ S + + S+ +
Sbjct: 19 QTKPTKSKALTNTIINHLKANRLQKAVSILFA----SNSSVPYSLYASLFQLCSSTLSIV 74
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+I +I + + N + Y +C + A ++F ++ RD SWN II A
Sbjct: 75 EARKIESHLITFNPTPPIFLLNRAIETYGKCECLKDARELFDEMPQRDGGSWNAIIKAYT 134
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ KAL L+ M+ + VF N+ TF V+ SC+ + + L + IH ++K +V
Sbjct: 135 QCGYAEKALGLFKDMNKEGVFANEITFASVLKSCSDVLDLSLSRQIHGLIVKCGFCGNVI 194
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLG 337
+GSALVD Y KC + A L F+EI N N V+WN ++ Y + ++ + ++ Q
Sbjct: 195 LGSALVDVYGKCKVMSEARLMFNEIENCNDVTWNVIVRRYLDVGNEREAVKMFFKMFQTD 254
Query: 338 YRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
RP FTFS+ L + A + L Q+H I++ +E E V SL YAK G + A
Sbjct: 255 VRPLNFTFSNALIACSAMRALNEGMQIHAFAIKIKFEEDEAVSSSLSNMYAKCGKLESA- 313
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
+ + R V+ + Y +G+ E +L ++ +VSWN ++A + ++
Sbjct: 314 RMIFDQHGSRDVISWTSMVSAYALSGRTREARELFEKMPEWSVVSWNAMLAGYIRSLQWE 373
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
E L+ MR D+ T LL+ C+ + ++ +G HG I + SS V N L
Sbjct: 374 EALDFVCLMRRTTEDIDHITLGLLLNVCAGISDVEMGKQAHGFIYR-HGFSSCILVGNAL 432
Query: 514 IDMYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
+DMYGKCG++ S+ F +M+ R+ I+W AL+++ + +++A+ F EM++ KP
Sbjct: 433 LDMYGKCGNLRSARVWFYQMSQSRDNISWNALLTSYARHHQSEQAMMIFGEMQW-ETKPS 491
Query: 573 RVALIAVLTACR-----------HGGLVREGMEL 595
+L AC HG ++R G L
Sbjct: 492 TFTFGTLLAACANIFALDQGKEIHGFMIRNGYNL 525
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 257/529 (48%), Gaps = 68/529 (12%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCA-----GIWSAEKMFKDVEIRDVVSWNTIIG 215
+QIH +IK G + L+ CA + A +F+ +E + WNT+I
Sbjct: 49 KQIHSQIIKTGLHNTQFALSKLIEF---CAISPFGNLSYALLLFESIEQPNQFIWNTMIR 105
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+ S + A++ Y+RM + V PN TF +++ SCA + + GK IH V+K LE
Sbjct: 106 GNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLES 165
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFS-------------------------------EIS 304
D FV ++L++ YA+ L A L FS EI
Sbjct: 166 DPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIP 225
Query: 305 NKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCL 363
++ VSWNA+I GYA ++ E+ + PNE T VL + L+L
Sbjct: 226 VRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLEL--- 282
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
G+ + S+ + + L V AL +Y++ G ++
Sbjct: 283 -------------GNWVRSWIEDHGLGSNLRLVNAL------------IDMYSKCGDLDK 317
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
L + DI+SWN++I +H YKE L LF+ M+ + + P++ TFVS+L AC+
Sbjct: 318 ARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAY 377
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
L L LG +H I K + ++T + LIDMY KCG+I ++ ++F M +++ +W A
Sbjct: 378 LGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNA 437
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSY 603
+IS L ++G A ALE FR+M GF+PD + + VL+AC H GLV G + F M Y
Sbjct: 438 MISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDY 497
Query: 604 GVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ P++ HY C++DLL R G EAE ++ M P+ IW + L C+
Sbjct: 498 DISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACR 546
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 137/511 (26%), Positives = 240/511 (46%), Gaps = 66/511 (12%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQ 62
N +N++I S A+ ++ M+ G EP +TF LL SC + EG Q+
Sbjct: 96 NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIH 155
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHG-------------------------------CL 91
VLK GL +D FV T+L+ +Y ++G CL
Sbjct: 156 GHVLKLGLE-SDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCL 214
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
D+ +FE++P + V+WN++++ + + G E+ + F E+ R+ VA ES+ V V+
Sbjct: 215 DDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSAC 274
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
+ LE G + + +G L + N+L++MY +C + A +F+ + +D++SWN
Sbjct: 275 AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWN 334
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
+IG + ++ +AL L+ +M V PN TFV ++ +CA L LGK IHA + K
Sbjct: 335 VMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394
Query: 272 ALE-CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFL 329
L + + ++L+D YAKC N+E A F+ + K++ SWNA+I G A ++ L
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALEL 454
Query: 330 LIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
++ G+ P++ TF VL + H ++ +G + + S ++
Sbjct: 455 FRQMRDEGFEPDDITFVGVLSAC-------SHAGLVELGRQCF-------------SSMV 494
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAH 448
D +I + + + R G ++E L+ +E +PD W ++ AC
Sbjct: 495 ED-------YDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRV 547
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+G+ + L F + P+N LLS
Sbjct: 548 HGNVE--LGEFAAKHLFELEPENPGAYVLLS 576
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 208/410 (50%), Gaps = 13/410 (3%)
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA--KCDNLEGAHLCFSEISN 305
++++C QN K IH+++IK L F S L++F A NL A L F I
Sbjct: 38 LLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94
Query: 306 KNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAF----QLLQL 360
N WN +I G + SSP +I + +L G PN +TF +L+S + Q+
Sbjct: 95 PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H ++++G E+ +V SL+ YA++G + A + ++ AV +I G Y G
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG-YTLRGC 213
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
++ +L ++ D VSWN +IA A +G ++E L F+ M+ A + P+ T V++LSA
Sbjct: 214 LDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSA 273
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C++ +L LG+ + I+ + S+ + N LIDMY KCG + + +F + ++++I+
Sbjct: 274 CAQSGSLELGNWVRSWIED-HGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIIS 332
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W +I + AL FR+M+ +P+ V +++L AC + G + G + ++
Sbjct: 333 WNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYID 392
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + + ++D+ + G+++ A+++ M P + W + G
Sbjct: 393 KKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMK-PKSLGSWNAMISG 441
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 141/273 (51%), Gaps = 2/273 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+P R+ VS+N++I+ Y++ G E+AL F M P + T +LS C +E
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELG 283
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
S +++ ++ + AL+ +Y + G LD+ +FE + K +++WN ++ +
Sbjct: 284 NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHM 343
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY-ELLV 178
++ + LF ++ +S V + +FV ++ + L+ G+ IH + K +
Sbjct: 344 NSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSL 403
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SL++MY +C I +A+++F ++ + + SWN +I LA + ALEL+ +M +
Sbjct: 404 WTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGF 463
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
P+ TFV V+++C+ LG+ + ++++
Sbjct: 464 EPDDITFVGVLSACSHAGLVELGRQCFSSMVED 496
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M +++ S+N++IS + G+ AL +F M + GFEP TF G+LS C VE G
Sbjct: 427 MKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELG 486
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIVSIFG 117
Q +S++++ ++ L GR G DE ++ ++M K W S++
Sbjct: 487 RQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACR 546
Query: 118 KHGFVE 123
HG VE
Sbjct: 547 VHGNVE 552
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 167/595 (28%), Positives = 287/595 (48%), Gaps = 53/595 (8%)
Query: 76 FVGTALLGLYGRHGCLD--EVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
F+ LL Y R G D + + ++MPR++ V++N ++ + + G E+ + F
Sbjct: 46 FLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAH 105
Query: 134 RS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
R+ EV ++ + S L+ G+ +H L + G + V+NSLV+MY +C +
Sbjct: 106 RAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDM 165
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
A ++F E RD VSWN+++ + L ++ M + N VI C
Sbjct: 166 GEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCC 225
Query: 253 AGLQNSILG--KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+G S+ G +++H V+K L+ D+F+ SA+VD YAK L A F + + N+V
Sbjct: 226 SGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVV 285
Query: 311 WNALILGYASKSSPT-------SIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQL---LQ 359
+NA+I G + ++ L EL G P EFTFS V+R+ +LA + Q
Sbjct: 286 FNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQ 345
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+H +++ ++ +++ +L+ Y S + D
Sbjct: 346 IHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGF-------------------------- 379
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+ + + D+V+W +I+ C N ++ L LF + + PD +T S+++
Sbjct: 380 ------RCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMN 433
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVC--NMLIDMYGKCGSIGSSVKIFNEMTDRN 537
AC+ L + G + K+ D F N I MY + G++ ++++ F EM +
Sbjct: 434 ACASLAVVRTGEQMQCFATKSGF---DRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHD 490
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
V++W+A+IS+ +G A++AL+ F EM P+ + + VLTAC HGGLV EG+ +E
Sbjct: 491 VVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYE 550
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M YG+ P + H CVVDLL R G L +AE I F ++W++ L C+
Sbjct: 551 IMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCR 605
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 159/592 (26%), Positives = 278/592 (46%), Gaps = 62/592 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE--PTQFTF-GGLLSCDSLNPV- 56
MP RN VSFN +I AYSR G E++L FL+ +R E +FT+ L +C +
Sbjct: 73 MPRRNAVSFNLLIDAYSRAGQTEESLETFLHA-HRAAEVKADRFTYAAALAACSRAGRLK 131
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
EG + A + GL FV +L+ +Y R G + E VF+ + V+WNS+VS +
Sbjct: 132 EGKVVHALAVLEGL-AEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGY 190
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG--EQIHGLVIKNGFDY 174
+ G E+ + +F + R + L + VI S G E +HG V+K G D
Sbjct: 191 LRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDT 250
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN------FGKALE 228
+L +A+++V+MY + + A +FK V +VV +N +I L E +AL
Sbjct: 251 DLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALS 310
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
LY + + P + TF VI +C + GK IH +V+K+ + D F+GSAL+D Y
Sbjct: 311 LYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYF 370
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSH 347
+E CF + +++V+W A+I G ++ L ELL +G +P+ FT S
Sbjct: 371 NSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISS 430
Query: 348 VLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
V+ + + ++ Q+ C + G++ + + S + YA+SG + A
Sbjct: 431 VMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAA----------- 479
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
++ ++E D+VSW+ +I++ A +G ++ L+ F M
Sbjct: 480 ---------------------IQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMV 518
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
A++ P+ TF+ +L+ACS + G + ++K + C ++D+ G+ G +
Sbjct: 519 GAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRL 578
Query: 524 GSSVK-IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
+ I + + + W +L+ + ++ R+ME DR+
Sbjct: 579 ADAEAFIRDSIFHDEPVVWQSLLGSCRIH----------RDMERGQLVADRI 620
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 122/249 (48%), Gaps = 6/249 (2%)
Query: 409 NIIAGIYNR--TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAA 465
N + Y R G ++ +LL ++ R + VS+N++I A + G +E LE F + RAA
Sbjct: 49 NTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAA 108
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ D +T+ + L+ACS+ L G +H L E ++ FV N L+ MY +CG +G
Sbjct: 109 EVKADRFTYAAALAACSRAGRLKEGKVVHAL-AVLEGLAEGVFVSNSLVSMYARCGDMGE 167
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ ++F+ +R+ ++W +L+S G + L F M + AL +V+ C
Sbjct: 168 ARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSG 227
Query: 586 G-GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
G G VR E G++ ++ +VD+ + G L EA + ++ PN +++
Sbjct: 228 GDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSV-LDPNVVVF 286
Query: 645 RTFLEGCQR 653
+ G R
Sbjct: 287 NAMIAGLCR 295
>gi|242033481|ref|XP_002464135.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
gi|241917989|gb|EER91133.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
Length = 576
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 172/555 (30%), Positives = 270/555 (48%), Gaps = 35/555 (6%)
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI 148
G L VF+ +P +N+++ + G + L+ ++ V + +F V+
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
S DL G IH G +L V+ +L+++Y +CA A +F + +RDVV
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 209 SWNTIIGALAESENFGKALELYLRMS-VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
+WN ++ A + A+ L M + PN +T V ++ A G S+HA
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 268 VIKNAL---ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
++ L E V +G+AL+D YAKC +L A F ++ +N V+W+ALI G+
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286
Query: 325 TSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLI-IRMGYENYEYVLGSLMTS 382
T F L ++L G + +S+A L L +RMG + L
Sbjct: 287 TEAFNLFKDMLVEG-------MCFLSATSVASALRVCASLADLRMGTQ--------LHAL 331
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
AKSG+ +D A N + +Y + G NE L ++ D +S+ +
Sbjct: 332 LAKSGIHADLTA-------------GNSLLSMYAKAGLINEATMLFDEIAIKDTISYGAL 378
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
++ NG +E +FK M+A + PD T VSL+ ACS L L G HG +
Sbjct: 379 LSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVI-IRG 437
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
++ +T +CN LIDMY KCG I S ++F++M R++++W +I+ G++G + A F
Sbjct: 438 LALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFL 497
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
M+ GF+PD V I ++ AC H GLV EG F+ M YG+ P M+HY C+VDLL R
Sbjct: 498 SMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARG 557
Query: 623 GHLKEAEKIITTMPF 637
G L EA + I +MP
Sbjct: 558 GFLDEAYQFIQSMPL 572
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/490 (24%), Positives = 228/490 (46%), Gaps = 37/490 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
+P + ++N++I AYS G A+ ++ M+ P ++TF +L +C +L + G
Sbjct: 59 IPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAG 118
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A GL D FV TAL+ LY R +VF MP + +V WN++++ +
Sbjct: 119 RTIHAHAAAVGLH-TDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYAN 177
Query: 119 HGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY--- 174
HG + ++ R + S+ V ++ L+ L G +H ++ D
Sbjct: 178 HGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEE 237
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++L+ +L++MY +C + A ++F + +R+ V+W+ +IG + +A L+ M
Sbjct: 238 QVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDML 297
Query: 235 VD-IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
V+ + F + T+ + CA L + +G +HA + K+ + D+ G++L+ YAK +
Sbjct: 298 VEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLI 357
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSS 352
A + F EI+ K+ +S+ AL+ GY FL+ + +Q +P+ T ++ +
Sbjct: 358 NEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPAC 417
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
LQ G S + L + ++ N +
Sbjct: 418 SHLAALQ--------------------------HGRCSHGSVIIRGLALETSIC--NSLI 449
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G+ + + ++ ++ DIVSWN +IA +G KE LF M+ PD+
Sbjct: 450 DMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDV 509
Query: 473 TFVSLLSACS 482
TF+ L++ACS
Sbjct: 510 TFICLIAACS 519
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 214/463 (46%), Gaps = 39/463 (8%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A ++F + D ++N +I A + F A++LY M V PN+ TF +V+ +C+
Sbjct: 52 ARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSA 111
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
L + G++IHA L D+FV +AL+D Y +C A F+++ +++V+WNA+
Sbjct: 112 LADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAM 171
Query: 315 ILGYASKSS-PTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY 372
+ GYA+ +I L+++ G RPN T +L LL H + + G +
Sbjct: 172 LAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLL------PLLAQHGALFQ-GTSVH 224
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
Y L + + + LI AL + A V + G+ R NE
Sbjct: 225 AYCLRAYLDQNEEQVLIGTALLDMYA-KCKHLVYACRVFHGMTVR----NE--------- 270
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI-YPDNYTFVSLLSACSKLCNLALGS 491
V+W+ +I E LFK M + + + S L C+ L +L +G+
Sbjct: 271 ----VTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGT 326
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
LH L+ K+ I +D N L+ MY K G I + +F+E+ ++ I++ AL+S N
Sbjct: 327 QLHALLAKSG-IHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQN 385
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS----YGVEP 607
G A+ A F++M+ +PD +++++ AC H ++ G R + G+
Sbjct: 386 GKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHG-----RCSHGSVIIRGLAL 440
Query: 608 EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
E + ++D+ + G + + ++ MP + + W T + G
Sbjct: 441 ETSICNSLIDMYAKCGRIDLSRQVFDKMP-ARDIVSWNTMIAG 482
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 114/241 (47%), Gaps = 8/241 (3%)
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
GQ ++ ++ PD ++N +I A + G + ++L++ M R+ P+ YTF +L
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
ACS L +L G ++H + +D FV LID+Y +C G + +F +M R+V
Sbjct: 107 KACSALADLCAGRTIHAHAAAVG-LHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDV 165
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFL-GFKPDRVALIAVLTACRHGGLVREGMELFE 597
+ W A+++ +G A+ +M+ G +P+ L+++L G + +G +
Sbjct: 166 VAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHA 225
Query: 598 RMNRSY--GVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG---CQ 652
R+Y E ++ ++D+ + HL A ++ M N + W + G C
Sbjct: 226 YCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTV-RNEVTWSALIGGFVLCD 284
Query: 653 R 653
R
Sbjct: 285 R 285
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
++ +S+ +++S Y + G E+A +F M +P T L+ +C L ++ G
Sbjct: 370 KDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCS 429
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
SV+ GL + + +L+ +Y + G +D VF+ MP + +V+WN++++ +G HG
Sbjct: 430 HGSVIIRGL-ALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGL 488
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNE 154
++ LF + + +F+ +I S+
Sbjct: 489 GKEATTLFLSMKNQGFEPDDVTFICLIAACSHS 521
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
MP R++VS+N++I+ Y G ++A +FL M N+GFEP TF L++ S + + EG
Sbjct: 468 MPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEG 527
Query: 59 AQ-LQASVLKNGLFC-ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV 107
K G+ + ++ ++ L R G LDE + MP K+ V
Sbjct: 528 KHWFDTMTHKYGILPRMEHYI--CMVDLLARGGFLDEAYQFIQSMPLKADV 576
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 168/606 (27%), Positives = 292/606 (48%), Gaps = 48/606 (7%)
Query: 91 LDEVVSVFEDMPR--KSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES----SF 144
+ + +F++MP K V+W +++S + ++GF F ++R ++ SF
Sbjct: 90 MSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSF 149
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
V+ + D Q+H LV K GF E + NS+V MY +C + AE +F D+E
Sbjct: 150 TSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIER 209
Query: 205 -------------------------------RDVVSWNTIIGALAESENFG-KALELYLR 232
RD VSWNT+I ++ FG + L +++
Sbjct: 210 PSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQ-HGFGVQCLAMFVE 268
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M PN T+ V+++CA + G +HA++++ D+ G+ L+D YAKC
Sbjct: 269 MCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGC 328
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLR- 350
L+ A F + + +SWN+LI G ++ L ++ + +EF +L
Sbjct: 329 LDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGV 388
Query: 351 ---SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
A LH I+ G + V +++T YAK G +D V L R +
Sbjct: 389 CSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCG-DTDKADLVFRLMPLRNTIS 447
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+ ++R+G + + +IV+WN +++ NG +E L+L+ MR+ +
Sbjct: 448 WTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGV 507
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI-ISSDTFVCNMLIDMYGKCGSIGSS 526
PD TF + + AC+ L + LG + + T+ +S + V N ++ MY +CG I +
Sbjct: 508 QPDWITFTTSIRACADLAIVKLG--MQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEA 565
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
F+ + D+++I+W A+++A NG + ++ F +M KP+ ++ ++VL+ C H
Sbjct: 566 KNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHM 625
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
GLV EG F+ M R +G+ P +H+ C+VDLL R G L++A+ +I MPF PNA +W
Sbjct: 626 GLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSA 685
Query: 647 FLEGCQ 652
L C+
Sbjct: 686 LLGSCR 691
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 150/646 (23%), Positives = 287/646 (44%), Gaps = 110/646 (17%)
Query: 1 MPDR--NVVSFNSIISAYSRCGYVEDALRMFLYMIN------RGFEPTQFTFGGLLSCDS 52
MP R + VS+ ++IS YS+ G+ + F MI + ++P FT + +C S
Sbjct: 100 MPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFT-SVMKACGS 158
Query: 53 LNPVEGA-QLQASVLKNGLFCADAFVGTALLGLYGRHGCLD------------------- 92
L A QL A V K G F + + +++G+Y + G +D
Sbjct: 159 LGDSRLAIQLHALVSKLG-FGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNS 217
Query: 93 ------------EVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALT 140
+ + +F MP + V+WN+++SIF +HGF C+ +F E+ +
Sbjct: 218 MIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPN 277
Query: 141 ESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
++ V+ ++ DL++G +H +++ +L+ N L++MY +C + A+++FK
Sbjct: 278 FMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFK 337
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
+ D +SWN++I + AL L+ +M V ++ ++ C+G +
Sbjct: 338 SLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYAST 397
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
G+ +H IK+ + VG+A++ YAKC + + A L F + +N +SW A+I ++
Sbjct: 398 GELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSR 457
Query: 321 KS--------------------------------SPTSIFLLIELLQLGYRPNEFTFSHV 348
S + L + + G +P+ TF+
Sbjct: 458 SGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTS 517
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+R+ I+++G + +++ A F +LN V A
Sbjct: 518 IRACADLA-------IVKLGMQ-----------------VVTHATKFGLSLN----VSVA 549
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N I +Y+R G E ++ D++SWN ++AA A NG +V++ F+ M
Sbjct: 550 NSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECK 609
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS--SDTFVCNMLIDMYGKCGSIGSS 526
P++ ++VS+LS CS + +A G + + IS ++ F C ++D+ G+ G + +
Sbjct: 610 PNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSC--MVDLLGRAGLLEQA 667
Query: 527 VKIFNEMTDR-NVITWTALISALGLNG---FAQRALEKFREMEFLG 568
+ M + N W+AL+ + ++ A+ A +K E++ G
Sbjct: 668 KDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEG 713
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/551 (22%), Positives = 235/551 (42%), Gaps = 80/551 (14%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
++H +I +G D L + N+L++MY C A ++F++ R++ +WNT+I AL
Sbjct: 27 ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVS 86
Query: 220 SENFGKALELYLRMSVDIV----------------FPNQT-------------------- 243
S A +L+ M V + F +++
Sbjct: 87 SSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDP 146
Query: 244 -TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
+F V+ +C L +S L +HA V K + + +++V Y KC +++ A F +
Sbjct: 147 FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD 206
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLL 358
I ++ WN++I GY+ P + +++ +E +++ ++ + Q L
Sbjct: 207 IERPSLFCWNSMIYGYSQMYGP---YKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCL 263
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAK-SGLISDALAFVTALNIPRA--VVPANIIAGIY 415
+ + G+ GS++++ A S L A L + + +V N + +Y
Sbjct: 264 AMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMY 323
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G + ++ L D +SWN +I H G ++ L LF MR + + D +
Sbjct: 324 AKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILP 383
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC--------------- 520
++L CS + G LHG K+ + SS V N +I MY KC
Sbjct: 384 TILGVCSGPDYASTGELLHGYTIKSGMGSSAP-VGNAIITMYAKCGDTDKADLVFRLMPL 442
Query: 521 ----------------GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
G IG + F+ M +RN++TW +++S NGF++ L+ + M
Sbjct: 443 RNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSM 502
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
G +PD + + AC +V+ GM++ + +G+ + + +V + R G
Sbjct: 503 RSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATK-FGLSLNVSVANSIVTMYSRCGL 561
Query: 625 LKEAEKIITTM 635
+KEA+ ++
Sbjct: 562 IKEAKNTFDSI 572
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 184/436 (42%), Gaps = 46/436 (10%)
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL--- 316
+ + +HA++I + L+ +F+ + L+ Y+ C A F E ++NI +WN +I
Sbjct: 26 IARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALV 85
Query: 317 -----------------------------------GYASKSSPTSIFLLIELLQLGYRPN 341
G+ S+S T ++ + G +
Sbjct: 86 SSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYD 145
Query: 342 EFTFSHVLRS--SLAFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
F+F+ V+++ SL L QLH L+ ++G+ + S++ Y K G + A
Sbjct: 146 PFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFF 205
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
+ P ++I G G Y + +++ +++ D VSWN +I+ + +G + L
Sbjct: 206 DIERPSLFCWNSMIYGYSQMYGPY-KALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLA 264
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
+F M P+ T+ S+LSAC+ +L G+ LH I + E S D N LIDMY
Sbjct: 265 MFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRME-HSLDLVFGNGLIDMY 323
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
KCG + + ++F + + + I+W +LI+ + G + AL F +M D L
Sbjct: 324 AKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILP 383
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
+L C G EL G+ + ++ + + G +A+ + MP
Sbjct: 384 TILGVCSGPDYASTG-ELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPL 442
Query: 638 PPNALIWRTFLEGCQR 653
N + W + R
Sbjct: 443 -RNTISWTAMITAFSR 457
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/515 (29%), Positives = 263/515 (51%), Gaps = 38/515 (7%)
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
T F + L D +++H +IK +L VA L++ + C + A +F
Sbjct: 19 TRRLFEEKLQDLHKCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVF 78
Query: 200 KDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
++ +V +NT+I A ++ KA + M + +F + T+ +++ +C G
Sbjct: 79 NQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLP 138
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCD--NLEGAHLCFSEISNKNIVSWNALILG 317
+ IH V K D+FV ++L+D Y+KC + A F E+ K++VSWN++I G
Sbjct: 139 TVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGG 198
Query: 318 YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLG 377
L++ LG R + R ++++
Sbjct: 199 ------------LVKAGDLG-RARKLFDEMAERDAVSWN--------------------- 224
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
+++ Y K+G +S A + V + +++G Y +TG L ++ ++V
Sbjct: 225 TILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSG-YCKTGDMEMARMLFDKMPFKNLV 283
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
+W I+I+ A G KE L+ M AA + PD+ T +S+L+AC++ L LG +H I
Sbjct: 284 TWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASI 343
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
KK I S V N L+DMY KCG + ++ IFNEM+ R++++W ++ L ++G ++A
Sbjct: 344 KKIRIKCS-VNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKA 402
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
++ F +M+ GFKPD+V LIA+L AC H G V +G+ F M R +G+ P ++HY C++D
Sbjct: 403 IQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMID 462
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
LL R G L+EA +++ +MP PN +IW T L C+
Sbjct: 463 LLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACR 497
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 215/491 (43%), Gaps = 51/491 (10%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQL 61
D NV +N++I A+ + A F M G FT+ LL +C+ + Q+
Sbjct: 83 DPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQM 142
Query: 62 -QASVLKNGLFCADAFVGTALLGLYGRHGCL--DEVVSVFEDMPRKSLVTWNSIVSIFGK 118
V K G F D FV +L+ Y + G L + + +F +M K LV+WNS++ K
Sbjct: 143 IHCHVEKYGFF-GDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVK 201
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + LF E+ + + G + Q E++ + ++
Sbjct: 202 AGDLGRARKLFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMP--------ERNVVS 253
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+++V+ Y + + A +F + +++V+W II AE +A LY +M +
Sbjct: 254 WSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGL 313
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T + ++ +CA +LGK +HA + K ++C V V +ALVD YAKC ++ A
Sbjct: 314 KPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALS 373
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+E+S +++VSWN ++ G A +I L ++ Q G++P++ T
Sbjct: 374 IFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVT------------- 420
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAG 413
L +++ + +G + L++ ++ +VP +
Sbjct: 421 ------------------LIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMID 462
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC-AHNGDYKEVLELFKYMRAARIYPDN 471
+ R G+ E +L+ + P+ V W ++ AC HN L + + + P N
Sbjct: 463 LLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLEQSDPGN 522
Query: 472 YTFVSLLSACS 482
Y+ +S + A +
Sbjct: 523 YSMLSNIFAAA 533
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 41/207 (19%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM---------------INRGFEPTQFTFG 45
MP+RNVVS+++++S Y + G +E A +F M +G T
Sbjct: 246 MPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLY 305
Query: 46 GLLSCDSLNP------------------VEGAQLQASVLKNGLFCADAFVGTALLGLYGR 87
+ L P V G ++ AS+ K + C+ V AL+ +Y +
Sbjct: 306 NQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCS-VNVSNALVDMYAK 364
Query: 88 HGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGV 147
G +D+ +S+F +M + LV+WN ++ HG E + LF ++ + + + + +
Sbjct: 365 CGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAI 424
Query: 148 I----HGLSNEQDLEF---GEQIHGLV 167
+ H +Q L + E+ HG+V
Sbjct: 425 LCACTHAGFVDQGLSYFNSMERDHGIV 451
>gi|218190567|gb|EEC72994.1| hypothetical protein OsI_06907 [Oryza sativa Indica Group]
Length = 711
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 175/609 (28%), Positives = 294/609 (48%), Gaps = 48/609 (7%)
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
+G QL ++K G + F+G++L+ LY R L+ VF+ MP K+ V+W +++S
Sbjct: 30 TQGTQLHGLLVKVGCD-STVFIGSSLITLYSRCSQLESSYLVFQTMPTKNTVSWTAMISG 88
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
F H VE C+ LF ++ S + +F + + L G +H L ++ GF
Sbjct: 89 FALHNRVEPCLHLFASMMLSSCKPNDITFATLFSVCTKHALLALGRSVHALQMRMGFHSY 148
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V+N+L++MY +C I A+ +F + +D+VSWN II ++ L+L M
Sbjct: 149 VHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFGCSQYVLAKHCLDLLKEMER 208
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ P+ +F+ V++SC + G+ +I++ ++ + S +VD + LE
Sbjct: 209 QHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDHYSCMVDLLGRAGLLEE 268
Query: 296 AHLCFSEIS-NKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNE---FTFSHVLRS 351
A +S N V W +L LG SI + +L P + T +L +
Sbjct: 269 AWDLIQTMSIPPNAVIWGSL-LGSCRVHGNISIGIQAAEHRLKLEPGKGETSTDQSILAA 327
Query: 352 SLA--------FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
+++ Q QLH L++++G ++ ++ SL+T
Sbjct: 328 AMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLIT---------------------- 365
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+Y+R Q + + + + VSW +I+ A + + L LF MR
Sbjct: 366 ----------LYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMR 415
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ P++ TF +L S C+ LALG S+H L + S V N L+ MY KCG I
Sbjct: 416 LSSCKPNDITFATLFSVCTNHALLALGKSVHALQMRMGF-HSYVHVSNALLSMYAKCGCI 474
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ IF + +++++W A+I G A+ L+ +EME PD ++ + VL++C
Sbjct: 475 DEAQSIFGFIACKDLVSWNAMIFGCSQYGLAKHCLDLLKEMERQHIVPDALSFLGVLSSC 534
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
RH LV EG F+ M +G++P +DHY C+VDLL R G L+EA +I TM PPNA+I
Sbjct: 535 RHARLVEEGRHCFKTMIE-HGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVI 593
Query: 644 WRTFLEGCQ 652
W + L C+
Sbjct: 594 WGSLLGSCR 602
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 125/540 (23%), Positives = 236/540 (43%), Gaps = 52/540 (9%)
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
+ E + +S + ++ Q G Q+HGL++K G D + + +SL+ +Y +C+ +
Sbjct: 6 KGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLE 65
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
S+ +F+ + ++ VSW +I A L L+ M + PN TF + + C
Sbjct: 66 SSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITFATLFSVCT 125
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
LG+S+HA ++ V V +AL+ YAKC +E A F I+ K++VSWNA
Sbjct: 126 KHALLALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNA 185
Query: 314 LILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ--LHCLI------ 364
+I G + + + LL E+ + P+ +F VL S +L++ HC
Sbjct: 186 IIFGCSQYVLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHG 245
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
I+ G ++Y ++ L ++GL+ +A + ++IP
Sbjct: 246 IKPGLDHYSCMVDLL----GRAGLLEEAWDLIQTMSIP---------------------- 279
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-----RAARIYPDNYTFVSLLS 479
P+ V W ++ +C +G+ ++ ++ D + +S
Sbjct: 280 ---------PNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLEPGKGETSTDQSILAAAMS 330
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
+C+ G+ LHGL+ K S F+ + LI +Y +C + SS +F M +N +
Sbjct: 331 SCADRQMFTQGTQLHGLLVKVG-CDSTVFIGSSLITLYSRCSQLESSYLVFQTMPTKNTV 389
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+WTA+IS L+ + L F M KP+ + + + C + L+ G +
Sbjct: 390 SWTAMISGFALHNRVEPCLHLFASMRLSSCKPNDITFATLFSVCTNHALLALGKSVHALQ 449
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKY 659
R G + + ++ + + G + EA+ I + + + W + GC + +AK+
Sbjct: 450 MR-MGFHSYVHVSNALLSMYAKCGCIDEAQSIFGFIAC-KDLVSWNAMIFGCSQYGLAKH 507
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 202/428 (47%), Gaps = 28/428 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQL 61
+++VS+N+II S+ + L + M + P +F G+L SC V EG
Sbjct: 178 KDLVSWNAIIFGCSQYVLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHC 237
Query: 62 QASVLKNGLFCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKH 119
+++++G+ D + + ++ L GR G L+E + + M + V W S++ H
Sbjct: 238 FKTMIEHGIKPGLDHY--SCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVH 295
Query: 120 GFVEDCM-----FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
G + + L E + E + +S + ++ Q G Q+HGL++K G D
Sbjct: 296 GNISIGIQAAEHRLKLEPGKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDS 355
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ + +SL+ +Y +C+ + S+ +F+ + ++ VSW +I A L L+ M
Sbjct: 356 TVFIGSSLITLYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMR 415
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ PN TF + + C LGKS+HA ++ V V +AL+ YAKC ++
Sbjct: 416 LSSCKPNDITFATLFSVCTNHALLALGKSVHALQMRMGFHSYVHVSNALLSMYAKCGCID 475
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F I+ K++VSWNA+I G + + + LL E+ + P+ +F VL S
Sbjct: 476 EAQSIFGFIACKDLVSWNAMIFGCSQYGLAKHCLDLLKEMERQHIVPDALSFLGVLSSCR 535
Query: 354 AFQLLQ--LHCLI------IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+L++ HC I+ G ++Y ++ L ++GL+ +A + ++IP
Sbjct: 536 HARLVEEGRHCFKTMIEHGIKPGLDHYSCMVDLL----GRAGLLEEAWDLIQTMSIP--- 588
Query: 406 VPANIIAG 413
P +I G
Sbjct: 589 -PNAVIWG 595
>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14850-like [Cucumis sativus]
Length = 606
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 252/521 (48%), Gaps = 40/521 (7%)
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYELLVANSLVNMYFQCAGIWSAEK 197
L+++S V+ + + G H ++K + + N LVNMY + + SA+
Sbjct: 4 LSQNSLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKL 63
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQN 257
+ + R VV+W +I ++ F AL + M D V PN TF V+ + GL+
Sbjct: 64 ILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRM 123
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
GK +HA +K L DVFVG ++ D Y+K L A+ F E+ ++N+ +WNA I
Sbjct: 124 DTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISN 183
Query: 318 YASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQL---LQLHCLIIRMGYENY 372
P S+ IELL++G +P+ TF L + S L QLH IIR GY
Sbjct: 184 SVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQN 243
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
V L+ Y K G + + +++R G+ N
Sbjct: 244 VSVSNGLIDFYGKCGEVECSEM-------------------VFDRMGERNS--------- 275
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
VSW+ +IAA N + ++ LF R I P ++ S+L AC+ L + G S
Sbjct: 276 ----VSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRS 331
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+ L K + + FV + L+DMYGKCGSI ++ + FN M +RN+++W AL+ G
Sbjct: 332 VQALAVKA-CVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQG 390
Query: 553 FAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
A +A+ EM G P V+LI L+AC G ++ GM++FE M YGVEP +H
Sbjct: 391 HANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEH 450
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y C+VDLL R G ++ A I MPFPP IW L C+
Sbjct: 451 YACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACR 491
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 180/333 (54%), Gaps = 3/333 (0%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEGA 59
P R+VV++ ++I+ + G AL F M++ P FTF +L + G
Sbjct: 69 PCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGK 128
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
QL A +K GL D FVG ++ +Y + G L++ VF++MP ++L TWN+ +S H
Sbjct: 129 QLHALAVKEGLI-NDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLH 187
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ED + F EL+R +F ++ S++ L G Q+HG +I++G+ + V+
Sbjct: 188 GRPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVS 247
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L++ Y +C + +E +F + R+ VSW+++I A ++ KA L+LR + +
Sbjct: 248 NGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIE 307
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P V+ +CAGL G+S+ A +K +E ++FV SALVD Y KC +++ A
Sbjct: 308 PTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQA 367
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIE 332
F+ + +N+VSWNAL+ GYA + L+E
Sbjct: 368 FNAMPERNLVSWNALLGGYAHQGHANKAVALLE 400
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 187/418 (44%), Gaps = 41/418 (9%)
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEGAH 297
F +Q + V+ +++S+LG++ HA+++K F+ + LV+ YAK D+L A
Sbjct: 3 FLSQNSLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAK 62
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFL-LIELLQLGYRPNEFTFSHVLRSSLAFQ 356
L +++V+W ALI G S L ++L RPN+FTF VL++S +
Sbjct: 63 LILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLR 122
Query: 357 L----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ QLH L ++ G N +V S+ Y+K G ++DA
Sbjct: 123 MDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAY------------------- 163
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K+ ++ ++ +WN I+ +G ++ + F + PD+
Sbjct: 164 -------------KVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSI 210
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF L+ACS L G LHG I ++ + V N LID YGKCG + S +F+
Sbjct: 211 TFCXFLNACSDKLGLGPGCQLHGFIIRSG-YGQNVSVSNGLIDFYGKCGEVECSEMVFDR 269
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
M +RN ++W++LI+A N ++A F +P + +VL AC + G
Sbjct: 270 MGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFG 329
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + + VE + +VD+ + G + AE+ MP N + W L G
Sbjct: 330 RSV-QALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMP-ERNLVSWNALLGG 385
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 223/528 (42%), Gaps = 62/528 (11%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G A +LK AF+ L+ +Y + L+ + E P +S+VTW ++++
Sbjct: 25 GRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSV 84
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G + F +++ V + +F V+ + + G+Q+H L +K G ++
Sbjct: 85 QNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVF 144
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL---AESENFGKALELYLRMS 234
V S+ +MY + + A K+F ++ R++ +WN I E+ A LR+
Sbjct: 145 VGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVG 204
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
P+ TF +N+C+ G +H +I++ +V V + L+DFY KC +E
Sbjct: 205 GK---PDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVE 261
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
+ + F + +N VSW++LI Y + + L + + P +F S VL +
Sbjct: 262 CSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACA 321
Query: 354 AFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
++ + L ++ E +V +L+ Y K G I +A A+ R +V N
Sbjct: 322 GLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMP-ERNLVSWN 380
Query: 410 IIAGIYNRTGQYNETVKLLSQLER-----PDIVSWNIVIAACAHNGDYKEVLELFKYMR- 463
+ G Y G N+ V LL ++ P VS ++AC+ GD K +++F+ M+
Sbjct: 381 ALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKE 440
Query: 464 --AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
P++Y AC L+D+ G+ G
Sbjct: 441 RYGVEPGPEHY-------AC-------------------------------LVDLLGRAG 462
Query: 522 SIGSSVKIFNEMTDRNVIT-WTALISALGLNG---FAQRALEKFREME 565
+ + M I+ W AL+ A ++G + A EK E++
Sbjct: 463 MVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELD 510
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 133/256 (51%), Gaps = 4/256 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
MP RN+ ++N+ IS G ED++ F+ ++ G +P TF L+ D L G
Sbjct: 169 MPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPG 228
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL ++++G + + V L+ YG+ G ++ VF+ M ++ V+W+S+++ + +
Sbjct: 229 CQLHGFIIRSG-YGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQ 287
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ E LF + ++ T+ V+ + ++EFG + L +K + + V
Sbjct: 288 NNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFV 347
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDI 237
A++LV+MY +C I +AE+ F + R++VSWN ++G A + KA+ L M S
Sbjct: 348 ASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAG 407
Query: 238 VFPNQTTFVYVINSCA 253
+ P+ + + +++C+
Sbjct: 408 IVPSYVSLICALSACS 423
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 257/529 (48%), Gaps = 68/529 (12%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCA-----GIWSAEKMFKDVEIRDVVSWNTIIG 215
+QIH +IK G + L+ CA + A +F+ +E + WNT+I
Sbjct: 49 KQIHSQIIKTGLHNTQFALSKLIEF---CAISPFGNLSYALLLFESIEQPNQFIWNTMIR 105
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+ S + A++ Y+RM + V PN TF +++ SCA + + GK IH V+K LE
Sbjct: 106 GNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLES 165
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFS-------------------------------EIS 304
D FV ++L++ YA+ L A L FS EI
Sbjct: 166 DPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIP 225
Query: 305 NKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCL 363
++ VSWNA+I GYA ++ E+ + PNE T VL + L+L
Sbjct: 226 VRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLEL--- 282
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
G+ + S+ + + L V AL +Y++ G ++
Sbjct: 283 -------------GNWVRSWIEDHGLGSNLRLVNAL------------IDMYSKCGDLDK 317
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
L + DI+SWN++I +H YKE L LF+ M+ + + P++ TFVS+L AC+
Sbjct: 318 ARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAY 377
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
L L LG +H I K + ++T + LIDMY KCG+I ++ ++F M +++ +W A
Sbjct: 378 LGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNA 437
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSY 603
+IS L ++G A ALE FR+M GF+PD + + VL+AC H GLV G + F M Y
Sbjct: 438 MISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDY 497
Query: 604 GVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ P++ HY C++DLL R G EAE ++ M P+ IW + L C+
Sbjct: 498 DISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACR 546
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/511 (26%), Positives = 240/511 (46%), Gaps = 66/511 (12%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQ 62
N +N++I S A+ ++ M+ G EP +TF LL SC + EG Q+
Sbjct: 96 NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIH 155
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHG-------------------------------CL 91
VLK GL +D FV T+L+ +Y ++G CL
Sbjct: 156 GHVLKLGL-ESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCL 214
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
D+ +FE++P + V+WN++++ + + G E+ + F E+ R+ VA ES+ V V+
Sbjct: 215 DDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSAC 274
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
+ LE G + + +G L + N+L++MY +C + A +F+ + +D++SWN
Sbjct: 275 AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWN 334
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
+IG + ++ +AL L+ +M V PN TFV ++ +CA L LGK IHA + K
Sbjct: 335 VMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394
Query: 272 ALE-CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFL 329
L + + ++L+D YAKC N+E A F+ + K++ SWNA+I G A ++ L
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALEL 454
Query: 330 LIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
++ G+ P++ TF VL + H ++ +G + + S ++
Sbjct: 455 FRQMRDEGFEPDDITFVGVLSAC-------SHAGLVELGRQCF-------------SSMV 494
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAH 448
D +I + + + R G ++E L+ +E +PD W ++ AC
Sbjct: 495 ED-------YDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRV 547
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+G+ + L F + P+N LLS
Sbjct: 548 HGNVE--LGEFAAKHLFELEPENPGAYVLLS 576
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 208/410 (50%), Gaps = 13/410 (3%)
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA--KCDNLEGAHLCFSEISN 305
++++C QN K IH+++IK L F S L++F A NL A L F I
Sbjct: 38 LLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94
Query: 306 KNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS----SLAFQLLQL 360
N WN +I G + SSP +I + +L G PN +TF +L+S + Q+
Sbjct: 95 PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H ++++G E+ +V SL+ YA++G + A + ++ AV +I G Y G
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG-YTLRGC 213
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
++ +L ++ D VSWN +IA A +G ++E L F+ M+ A + P+ T V++LSA
Sbjct: 214 LDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSA 273
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C++ +L LG+ + I+ + S+ + N LIDMY KCG + + +F + ++++I+
Sbjct: 274 CAQSGSLELGNWVRSWIED-HGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIIS 332
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W +I + AL FR+M+ +P+ V +++L AC + G + G + ++
Sbjct: 333 WNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYID 392
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + + ++D+ + G+++ A+++ M P + W + G
Sbjct: 393 KKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMK-PKSLGSWNAMISG 441
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 141/273 (51%), Gaps = 2/273 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+P R+ VS+N++I+ Y++ G E+AL F M P + T +LS C +E
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELG 283
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
S +++ ++ + AL+ +Y + G LD+ +FE + K +++WN ++ +
Sbjct: 284 NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHM 343
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY-ELLV 178
++ + LF ++ +S V + +FV ++ + L+ G+ IH + K +
Sbjct: 344 NSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSL 403
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SL++MY +C I +A+++F ++ + + SWN +I LA + ALEL+ +M +
Sbjct: 404 WTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGF 463
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
P+ TFV V+++C+ LG+ + ++++
Sbjct: 464 EPDDITFVGVLSACSHAGLVELGRQCFSSMVED 496
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M +++ S+N++IS + G+ AL +F M + GFEP TF G+LS C VE G
Sbjct: 427 MKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELG 486
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIVSIFG 117
Q +S++++ ++ L GR G DE ++ ++M K W S++
Sbjct: 487 RQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACR 546
Query: 118 KHGFVE 123
HG VE
Sbjct: 547 VHGNVE 552
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 169/521 (32%), Positives = 252/521 (48%), Gaps = 40/521 (7%)
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYELLVANSLVNMYFQCAGIWSAEK 197
L+++S V+ + + G H ++K + + N LVNMY + + SA+
Sbjct: 4 LSQNSLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKL 63
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQN 257
+ + R VV+W +I ++ F AL + M D V PN TF V+ + GL+
Sbjct: 64 ILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRM 123
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
GK +HA +K L DVFVG ++ D Y+K L A+ F E+ ++N+ +WNA I
Sbjct: 124 DTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISN 183
Query: 318 YASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQL---LQLHCLIIRMGYENY 372
P S+ IELL++G +P+ TF L + S L QLH IIR GY
Sbjct: 184 SVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQN 243
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
V L+ Y K G + + +++R G+ N
Sbjct: 244 VSVSNGLIDFYGKCGEVECSEM-------------------VFDRMGERNS--------- 275
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
VSW+ +IAA N + ++ LF R I P ++ S+L AC+ L + G S
Sbjct: 276 ----VSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRS 331
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+ L K + + FV + L+DMYGKCGSI ++ + FN M +RN+++W AL+ G
Sbjct: 332 VQALAVKA-CVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQG 390
Query: 553 FAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
A +A+ EM G P V+LI L+AC G ++ GM++FE M YGVEP +H
Sbjct: 391 HANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEH 450
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y C+VDLL R G ++ A I MPFPP IW L C+
Sbjct: 451 YACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACR 491
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 180/333 (54%), Gaps = 3/333 (0%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEGA 59
P R+VV++ ++I+ + G AL F M++ P FTF +L + G
Sbjct: 69 PCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGK 128
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
QL A +K GL D FVG ++ +Y + G L++ VF++MP ++L TWN+ +S H
Sbjct: 129 QLHALAVKEGLI-NDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLH 187
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ED + F EL+R +F ++ S++ L G Q+HG +I++G+ + V+
Sbjct: 188 GRPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVS 247
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L++ Y +C + +E +F + R+ VSW+++I A ++ KA L+LR + +
Sbjct: 248 NGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIE 307
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P V+ +CAGL G+S+ A +K +E ++FV SALVD Y KC +++ A
Sbjct: 308 PTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQA 367
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIE 332
F+ + +N+VSWNAL+ GYA + L+E
Sbjct: 368 FNAMPERNLVSWNALLGGYAHQGHANKAVALLE 400
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 188/418 (44%), Gaps = 41/418 (9%)
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEGAH 297
F +Q + V+ +++S+LG++ HA+++K F+ + LV+ YAK D+L A
Sbjct: 3 FLSQNSLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAK 62
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFL-LIELLQLGYRPNEFTFSHVLRSSLAFQ 356
L +++V+W ALI G S L ++L RPN+FTF VL++S +
Sbjct: 63 LILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLR 122
Query: 357 L----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ QLH L ++ G N +V S+ Y+K G ++DA
Sbjct: 123 MDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAY------------------- 163
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K+ ++ ++ +WN I+ +G ++ + F + PD+
Sbjct: 164 -------------KVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSI 210
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF + L+ACS L G LHG I ++ + V N LID YGKCG + S +F+
Sbjct: 211 TFCAFLNACSDKLGLGPGCQLHGFIIRSG-YGQNVSVSNGLIDFYGKCGEVECSEMVFDR 269
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
M +RN ++W++LI+A N ++A F +P + +VL AC + G
Sbjct: 270 MGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFG 329
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + + VE + +VD+ + G + AE+ MP N + W L G
Sbjct: 330 RSV-QALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMP-ERNLVSWNALLGG 385
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 223/528 (42%), Gaps = 62/528 (11%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G A +LK AF+ L+ +Y + L+ + E P +S+VTW ++++
Sbjct: 25 GRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSV 84
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G + F +++ V + +F V+ + + G+Q+H L +K G ++
Sbjct: 85 QNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVF 144
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL---AESENFGKALELYLRMS 234
V S+ +MY + + A K+F ++ R++ +WN I E+ A LR+
Sbjct: 145 VGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVG 204
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
P+ TF +N+C+ G +H +I++ +V V + L+DFY KC +E
Sbjct: 205 GK---PDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVE 261
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
+ + F + +N VSW++LI Y + + L + + P +F S VL +
Sbjct: 262 CSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACA 321
Query: 354 AFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
++ + L ++ E +V +L+ Y K G I +A A+ R +V N
Sbjct: 322 GLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMP-ERNLVSWN 380
Query: 410 IIAGIYNRTGQYNETVKLLSQLER-----PDIVSWNIVIAACAHNGDYKEVLELFKYMR- 463
+ G Y G N+ V LL ++ P VS ++AC+ GD K +++F+ M+
Sbjct: 381 ALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKE 440
Query: 464 --AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
P++Y AC L+D+ G+ G
Sbjct: 441 RYGVEPGPEHY-------AC-------------------------------LVDLLGRAG 462
Query: 522 SIGSSVKIFNEMTDRNVIT-WTALISALGLNG---FAQRALEKFREME 565
+ + M I+ W AL+ A ++G + A EK E++
Sbjct: 463 MVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELD 510
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 133/256 (51%), Gaps = 4/256 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
MP RN+ ++N+ IS G ED++ F+ ++ G +P TF L+ D L G
Sbjct: 169 MPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPG 228
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL ++++G + + V L+ YG+ G ++ VF+ M ++ V+W+S+++ + +
Sbjct: 229 CQLHGFIIRSG-YGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQ 287
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ E LF + ++ T+ V+ + ++EFG + L +K + + V
Sbjct: 288 NNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFV 347
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDI 237
A++LV+MY +C I +AE+ F + R++VSWN ++G A + KA+ L M S
Sbjct: 348 ASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAG 407
Query: 238 VFPNQTTFVYVINSCA 253
+ P+ + + +++C+
Sbjct: 408 IVPSYVSLICALSACS 423
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/528 (29%), Positives = 255/528 (48%), Gaps = 42/528 (7%)
Query: 138 ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEK 197
A+ + +V ++H L +HG + K G ++ VA SLVN Y +C A +
Sbjct: 75 AVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARR 134
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQN 257
+F + R+VV+W ++ + LE+++ M +P+ T +N+C +
Sbjct: 135 LFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCD 194
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
LGK +H IK E +G++L YAK +L+ A F I KN+++W +I
Sbjct: 195 VDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISA 254
Query: 318 YASKSS--PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV 375
A + L I++L G PNEFT + V+ SL L L+
Sbjct: 255 CAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVM--SLCGTRLDLN-------------- 298
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
LG + +++ N+P N +Y R G+ +E ++L Q+E
Sbjct: 299 LGKQVQAFS--------FKIGCETNLP----VKNSTMYLYLRKGETDEAMRLFEQMEDAS 346
Query: 436 IVSWNIVIAACAHNGDYK-----------EVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
I++WN +I+ A D + L +F+ ++ + + PD +TF S+LS CS +
Sbjct: 347 IITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAM 406
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
L G +H K+ +S D V + L++MY KCG I + K F EM R +TWT++
Sbjct: 407 MALEQGEQIHAQTIKSGFLS-DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSM 465
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
IS +G Q A++ F EM G +P+ + +++L+AC + GLV E F+ M + Y
Sbjct: 466 ISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYC 525
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+EP +DHY C++D+ VR G +++A I F PN IW + + GC+
Sbjct: 526 IEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCR 573
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 213/441 (48%), Gaps = 36/441 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-----SCDSLNP 55
MP+RNVV++ ++++ Y+ L +F+ M+ G P+ +T G L SCD
Sbjct: 139 MPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCD---- 194
Query: 56 VE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
V+ G Q+ +K G + +G +L LY + G LD + F +P K+++TW +++S
Sbjct: 195 VDLGKQVHGYAIKYGAESITS-MGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMIS 253
Query: 115 IFGKHGFVEDC----MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
+ E+C + LF +++ V E + V+ DL G+Q+ K
Sbjct: 254 ACAED---EECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKI 310
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK----- 225
G + L V NS + +Y + A ++F+ +E +++WN +I A+ + K
Sbjct: 311 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQA 370
Query: 226 ------ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
AL ++ + ++ P+ TF +++ C+ + G+ IHA+ IK+ DV V
Sbjct: 371 RSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVV 430
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GY 338
SALV+ Y KC ++ A+ F E+ + V+W ++I GY+ P L E ++L G
Sbjct: 431 NSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGV 490
Query: 339 RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY--EYVL---GSLMTSYAKSGLISDAL 393
RPNE TF +L + L++ M + Y E V+ G ++ + + G + DA
Sbjct: 491 RPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAF 550
Query: 394 AFVTALNI-PRAVVPANIIAG 413
+F+ P + ++++AG
Sbjct: 551 SFIKRTGFEPNEAIWSSLVAG 571
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 239/521 (45%), Gaps = 57/521 (10%)
Query: 73 ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL 132
AD FV T+L+ Y R G + +F+ MP +++VTW ++V+ + + + +F E+
Sbjct: 111 ADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEM 170
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
+ + + ++ D++ G+Q+HG IK G + + NSL ++Y + +
Sbjct: 171 LEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSL 230
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-ALELYLRMSVDIVFPNQTTFVYVINS 251
SA + F + ++V++W T+I A AE E + L L++ M +D V PN+ T V++
Sbjct: 231 DSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSL 290
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
C + LGK + A K E ++ V ++ + Y + + A F ++ + +I++W
Sbjct: 291 CGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITW 350
Query: 312 NALILGYAS------------KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL- 358
NA+I GYA ++ + +L + +P+ FTFS +L A L
Sbjct: 351 NAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALE 410
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
Q+H I KSG +SD VV + + +Y
Sbjct: 411 QGEQIHAQTI-------------------KSGFLSD-------------VVVNSALVNMY 438
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
N+ G + K ++ V+W +I+ + +G +E ++LF+ MR A + P+ TFV
Sbjct: 439 NKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFV 498
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
SLLSACS + ++KK I D + C +IDM+ + G + +
Sbjct: 499 SLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGC--MIDMFVRLGRVEDAFSFIKRT 556
Query: 534 T-DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFK 570
+ N W++L++ +G A A +K E++ G +
Sbjct: 557 GFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIE 597
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 187/633 (29%), Positives = 297/633 (46%), Gaps = 79/633 (12%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G+ L A + K G+ ++ ++ LL +Y + E + +D LV N ++S
Sbjct: 39 DGSALHAHLFKTGI-SSEQYISIKLLIMYLNYRKSAEADQISKDFDGFDLVVHNCMISAN 97
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ G +++ LF E+ ++ E S+ +I G +++G
Sbjct: 98 VQRGNLDEARKLFDEMPQT----NEISWTALISGF-----MKYGR--------------- 133
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V S+ W F+ ++VVSW I ++ +A++L++++
Sbjct: 134 -VRESM----------W----YFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLES 178
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV------------ 284
V PN+ TF V+ +CA L + LG S+ ++K E D+ V ++L+
Sbjct: 179 EVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLA 238
Query: 285 -------------------DFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT 325
D Y + D L A F E+ +N VSW+A+I Y P
Sbjct: 239 REVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPE 298
Query: 326 -SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLM 380
S+ L ++Q G++PN FS +L + + + LQ +H + ++G+E +V SL+
Sbjct: 299 ESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLI 358
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
Y K G D F+ + + +V N + G Y+ G E L + + + VSW+
Sbjct: 359 DMYCKCGETKDG-RFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWS 417
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
+IA + E+ E+F M P+ TF SLL AC+ +L G +LHG I K
Sbjct: 418 AIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKL 477
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
I DT+V L DMY K G I SS K+FN M +N ++WTA+I L +G A+ +L
Sbjct: 478 GI-QCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTL 536
Query: 561 FREMEFLG-FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
F EME P+ V +AVL AC H GLV +G+ F M YG++P+ H+ CVVD+L
Sbjct: 537 FEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDML 596
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G L EAE+ I +MPF P W L GC+
Sbjct: 597 SRAGRLFEAEEFIYSMPFQPETNAWAALLSGCK 629
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 199/413 (48%), Gaps = 65/413 (15%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GA 59
P +NVVS+ + IS Y + G+ +A+++F+ ++ +P + TF ++ +C +L G
Sbjct: 145 PFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGM 204
Query: 60 QLQASVLKNG------------LFC------------------ADAFVGTALLGLYGRHG 89
+ ++K G C D TA+L LY
Sbjct: 205 SVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMD 264
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH 149
L E +F++MP+++ V+W+++++ + + G+ E+ + LFC +++ S F ++
Sbjct: 265 ELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILS 324
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI----------------- 192
L++ + L+ G IHG V K GF+ ++ V++SL++MY +C
Sbjct: 325 ALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVS 384
Query: 193 WSA--------------EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
W+A + +F + +R+ VSW+ II + E F + E++ M +
Sbjct: 385 WNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGE 444
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN++TF ++ +CA + GK++H K++K ++CD +VG+AL D YAK ++E +
Sbjct: 445 IPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKK 504
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL--GYRPNEFTFSHVL 349
F+ + KN VSW A+I G A L E ++ PNE F VL
Sbjct: 505 VFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVL 557
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 148/289 (51%), Gaps = 39/289 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
MP RN VS++++I+ Y + GY E++LR+F MI GF+P F +LS +L VE
Sbjct: 276 MPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILS--ALASVEALQ 333
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G + V K G F D FV ++L+ +Y + G + +F+ + K++V+WN++V +
Sbjct: 334 AGMNIHGHVTKIG-FEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGY 392
Query: 117 GKHGFVEDCMFLFCEL-VRSEVALT------------------------------ESSFV 145
+G +E+ +LF + VR+ V+ + +S+F
Sbjct: 393 SLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFS 452
Query: 146 GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR 205
++ ++ L+ G+ +HG ++K G + V +L +MY + I S++K+F + +
Sbjct: 453 SLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKK 512
Query: 206 DVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCA 253
+ VSW +I LAES ++L L+ M + PN+ F+ V+ +C+
Sbjct: 513 NEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACS 561
>gi|297802780|ref|XP_002869274.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
gi|297315110|gb|EFH45533.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
lyrata]
Length = 686
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 170/583 (29%), Positives = 289/583 (49%), Gaps = 48/583 (8%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
V A++G+Y + G D + +FE++ +V+WN+I+S F + + + + +
Sbjct: 38 VSNAVMGMYRKAGRFDNALYIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAG 94
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
V ++ + + G Q+ V+K+G + +L+V NS + MY + A
Sbjct: 95 VVFDAFTYSTALSFCVGSEGFRLGLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGAR 154
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFG-KALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
++F ++ +D++SWN+++ L++ FG +A+ ++ M + V + +F VI +C
Sbjct: 155 RVFDEMPFKDMISWNSLLSGLSQEGTFGFEAVLIFRDMMREGVELDHVSFTSVITTCCHE 214
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
+ L + IH IK E + VG+ L+ Y+KC LE F ++S +N+VSW +I
Sbjct: 215 TDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMI 274
Query: 316 LGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS----SLAFQLLQLHCLIIRMGYEN 371
+++ SIFL + L G PNE TF +L + + L++H L I+ G+ +
Sbjct: 275 --SSNRDDAVSIFLNMRL--DGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVS 330
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
V S +T YAK + DA K +
Sbjct: 331 EPSVGNSFITMYAKFEALEDA--------------------------------KKAFDDI 358
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL-- 489
+I+SWN +I+ A NG E L++F A P+ YTF S+L+A + ++++
Sbjct: 359 TFREIISWNAMISGFAQNGFSHEALKMF-LSATAETMPNEYTFGSVLNAIAFAEDISVKH 417
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G H + K ++S V + L+DMY K G+I S K+FNEM+ RN WT++ISA
Sbjct: 418 GQRCHAHLLKLG-LNSCPVVSSALLDMYAKRGNINESEKVFNEMSQRNQFVWTSIISAYS 476
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
+G + F EM PD V ++VLTAC G+V +G E+ M Y +EP
Sbjct: 477 SHGDFNSVMNLFHEMIKENVAPDLVTFLSVLTACNRKGMVDKGHEILNMMIEDYNLEPSH 536
Query: 610 DHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+HY C+VD+L R G LKEAE++++ +P P + ++ L C+
Sbjct: 537 EHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCR 579
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 155/536 (28%), Positives = 273/536 (50%), Gaps = 42/536 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQ 60
D +VVS+N+I+S + + AL + M + G FT+ LS S G Q
Sbjct: 64 DPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLGLQ 120
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
LQ++V+K+GL +D VG + + +Y R G VF++MP K +++WNS++S + G
Sbjct: 121 LQSTVVKSGLE-SDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEG 179
Query: 121 -FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
F + + +F +++R V L SF VI +E DL+ QIHGL IK G++ L V
Sbjct: 180 TFGFEAVLIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 239
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L++ Y +C + + + +F + R+VVSW T+I S N A+ ++L M +D V+
Sbjct: 240 NILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMI-----SSNRDDAVSIFLNMRLDGVY 294
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN+ TFV ++N+ + G IH IK + VG++ + YAK + LE A
Sbjct: 295 PNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKA 354
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
F +I+ + I+SWNA+I G+A + PNE+TF VL +++AF
Sbjct: 355 FDDITFREIISWNAMISGFAQNGFSHEALKMFLSATAETMPNEYTFGSVL-NAIAFA--- 410
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+ ++ G + ++L L + V ++ + +Y + G
Sbjct: 411 -EDISVKHGQRCHAHLL---------------------KLGLNSCPVVSSALLDMYAKRG 448
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
NE+ K+ +++ + + W +I+A + +GD+ V+ LF M + PD TF+S+L+
Sbjct: 449 NINESEKVFNEMSQRNQFVWTSIISAYSSHGDFNSVMNLFHEMIKENVAPDLVTFLSVLT 508
Query: 480 ACSKLCNLALGSS-LHGLIKKTEI-ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
AC++ + G L+ +I+ + S + + C ++DM G+ G + + ++ +E+
Sbjct: 509 ACNRKGMVDKGHEILNMMIEDYNLEPSHEHYSC--MVDMLGRAGRLKEAEELMSEV 562
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 237/502 (47%), Gaps = 54/502 (10%)
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
DL+ G QIHG GF + V+N+++ MY + +A +F+++ DVVSWNTI+
Sbjct: 16 DLKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIFENLVDPDVVSWNTILS 75
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+++ AL +RM V + T+ ++ C G + LG + + V+K+ LE
Sbjct: 76 GFDDNQ---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLGLQLQSTVVKSGLES 132
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS--PTSIFLLIEL 333
D+ VG++ + Y++ + GA F E+ K+++SWN+L+ G + + + ++ + ++
Sbjct: 133 DLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEGTFGFEAVLIFRDM 192
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
++ G + +F+ V+ + L Q+H L I+ GYE+ V LM+ Y+K G++
Sbjct: 193 MREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVL 252
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK-LLSQLERPDIVSWNIVIAACAH 448
E VK + Q+ ++VSW +I++
Sbjct: 253 ---------------------------------EAVKSVFYQMSERNVVSWTTMISS--- 276
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
+ + + +F MR +YP+ TFV LL+A + G +HGL KT +S +
Sbjct: 277 --NRDDAVSIFLNMRLDGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPS- 333
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V N I MY K ++ + K F+++T R +I+W A+IS NGF+ AL+ F
Sbjct: 334 VGNSFITMYAKFEALEDAKKAFDDITFREIISWNAMISGFAQNGFSHEALKMFLSATAET 393
Query: 569 FKPDRVALIAVLTACRHGG--LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
P+ +VL A V+ G + + G+ ++D+ + G++
Sbjct: 394 M-PNEYTFGSVLNAIAFAEDISVKHGQRCHAHLLK-LGLNSCPVVSSALLDMYAKRGNIN 451
Query: 627 EAEKIITTMPFPPNALIWRTFL 648
E+EK+ M N +W + +
Sbjct: 452 ESEKVFNEMS-QRNQFVWTSII 472
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 199/378 (52%), Gaps = 13/378 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCG-YVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVE 57
MP ++++S+NS++S S+ G + +A+ +F M+ G E +F +++ C +
Sbjct: 160 MPFKDMISWNSLLSGLSQEGTFGFEAVLIFRDMMREGVELDHVSFTSVITTCCHETDLKL 219
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ +K G + + VG L+ Y + G L+ V SVF M +++V+W +++S
Sbjct: 220 ARQIHGLCIKRG-YESLLEVGNILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMIS--- 275
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+D + +F + V E +FVG+++ + + ++ G +IHGL IK GF E
Sbjct: 276 --SNRDDAVSIFLNMRLDGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPS 333
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V NS + MY + + A+K F D+ R+++SWN +I A++ +AL+++L + +
Sbjct: 334 VGNSFITMYAKFEALEDAKKAFDDITFREIISWNAMISGFAQNGFSHEALKMFLSATAET 393
Query: 238 VFPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ PN+ TF V+N+ A ++ + G+ HA ++K L V SAL+D YAK N+
Sbjct: 394 M-PNEYTFGSVLNAIAFAEDISVKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNINE 452
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLA 354
+ F+E+S +N W ++I Y+S S+ L E+++ P+ TF VL +
Sbjct: 453 SEKVFNEMSQRNQFVWTSIISAYSSHGDFNSVMNLFHEMIKENVAPDLVTFLSVLTACNR 512
Query: 355 FQLLQLHCLIIRMGYENY 372
++ I+ M E+Y
Sbjct: 513 KGMVDKGHEILNMMIEDY 530
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 187/695 (26%), Positives = 315/695 (45%), Gaps = 118/695 (16%)
Query: 5 NVVSFNSIISAYSRC-GYVEDALRMFLYMINRGFEPTQFTFGGLLS-----CDSLNP-VE 57
N+ + S I+ + C ++++ LR+ L+ ++ P + LS SLN +
Sbjct: 37 NINTEESSIALRNSCDSHLDNDLRLILFTLSLFLIPLGYYISTALSVLLSASPSLNEDSD 96
Query: 58 GAQLQASVLKNGLFCADA----FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
+Q V+ N AD+ F LL + G +D+ +F+ M ++ TWN++V
Sbjct: 97 DTGVQQVVMHN---IADSYQSIFHSNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMV 153
Query: 114 SIFGKHGFVEDCMFLF------------------CELVRSEVAL-------------TES 142
S + G + + LF C R A ++
Sbjct: 154 SGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQY 213
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
+ ++ G S ++ GE IHG V+KNGF+ + V LV+MY +C I AE +FK +
Sbjct: 214 TLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGL 273
Query: 203 EIR--DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
+ V W ++ A++ + KA+E + M + V NQ TF ++ +C+ +
Sbjct: 274 AFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCF 333
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
G+ +H +++N C+ +V SALVD YAKC +L A + + ++VSWN++I+G
Sbjct: 334 GEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVR 393
Query: 321 KS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL--LQLHCLIIRMGYENYEYVLG 377
+I L ++ + + +TF VL + ++ +HCL+I+ G+ENY+ V
Sbjct: 394 HGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCIVGRIDGKSVHCLVIKTGFENYKLVSN 453
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
+L+ YAK+ LN AV ++ D++
Sbjct: 454 ALVDMYAKT----------EDLNCAYAV----------------------FEKMFEKDVI 481
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SW ++ NG ++E L+ F MR + + PD + S+LSAC++L L G +H
Sbjct: 482 SWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDF 541
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
K + SS + V N L+ MY KCG + + IF M R+VITWTALI NG + +
Sbjct: 542 IKLGLRSSLS-VNNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDS 600
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
L + F++M + YG+EP +HY C++D
Sbjct: 601 L-----------------------------------KYFQQMKKIYGIEPGPEHYACMID 625
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L R G L EA++I+ M P+A +W+ L C+
Sbjct: 626 LFGRLGKLDEAKEILNQMDVKPDATVWKALLAACR 660
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 159/591 (26%), Positives = 284/591 (48%), Gaps = 39/591 (6%)
Query: 12 IISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNG 69
+IS Y R G +A +F M G +P+Q+T G +L C +L ++ G + V+KNG
Sbjct: 183 LISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNG 242
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP--RKSLVTWNSIVSIFGKHGFVEDCMF 127
F ++ +V L+ +Y + + E +F+ + + + V W ++V+ + ++G +
Sbjct: 243 -FESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIE 301
Query: 128 LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYF 187
F + V + +F ++ S+ FGEQ+HG +++NGF V ++LV+MY
Sbjct: 302 FFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYA 361
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVY 247
+C + SA+++ +++E DVVSWN++I +A+ L+ +M + + TF
Sbjct: 362 KCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPS 421
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
V+N C + I GKS+H VIK E V +ALVD YAK ++L A+ F ++ K+
Sbjct: 422 VLNCC--IVGRIDGKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKD 479
Query: 308 IVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHC 362
++SW +L+ GY S S+ ++ G P++F + +L + LL Q+H
Sbjct: 480 VISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHS 539
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
I++G + V SL+T YAK G + DA A ++++ + +I G Y R G+
Sbjct: 540 DFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVG-YARNGKGR 598
Query: 423 ETVKLLSQLER-----PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
+++K Q+++ P + +I G E E+ M + PD + +L
Sbjct: 599 DSLKYFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQM---DVKPDATVWKAL 655
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L+AC NL LG + + E +++ +V ML +MY + KI M +
Sbjct: 656 LAACRVHGNLELGERAATNLFELEPMNAMPYV--MLSNMYLAARKWDDAAKIRRLMKSKG 713
Query: 538 VI-----TWTALISALGL-----NGFAQRAL------EKFREMEFLGFKPD 572
+ +W + S L G + A E R ++ +G+ PD
Sbjct: 714 ITKEPGCSWIEMNSRLHTFISEDRGHPREAEIYSKIDEIIRRIKEVGYVPD 764
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 234/513 (45%), Gaps = 75/513 (14%)
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII------GALAESEN---------- 222
+N L+N + I A ++F + RD +WNT++ G L E+
Sbjct: 118 SNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSS 177
Query: 223 ------------FGK---ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
FG+ A +L+ RM ++ P+Q T ++ C+ L G+ IH
Sbjct: 178 ITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGY 237
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS-NK-NIVSWNALILGYASKSSPT 325
V+KN E +V+V + LVD YAKC ++ A + F ++ NK N V W A++ GYA
Sbjct: 238 VVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDH 297
Query: 326 SIFLLIELLQL-GYRPNEFTFSHVLR--SSLAFQLL--QLHCLIIRMGYENYEYVLGSLM 380
+ G N+FTF +L SS++ Q+H I+R G+ YV +L+
Sbjct: 298 KAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALV 357
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
YAK G + A ++L +E D+VSWN
Sbjct: 358 DMYAKCGDLGSA--------------------------------KRVLENMEDDDVVSWN 385
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
+I C +G +E + LFK M A + D+YTF S+L+ C + G S+H L+ KT
Sbjct: 386 SMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCC--IVGRIDGKSVHCLVIKT 443
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
+ V N L+DMY K + + +F +M +++VI+WT+L++ NG + +L+
Sbjct: 444 GF-ENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKT 502
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
F +M G PD+ + ++L+AC L+ G ++ + G+ + + +V +
Sbjct: 503 FCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIK-LGLRSSLSVNNSLVTMYA 561
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ G L +A+ I +M + + W + G R
Sbjct: 562 KCGCLDDADAIFVSMHV-RDVITWTALIVGYAR 593
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 125/233 (53%), Gaps = 1/233 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M D +VVS+NS+I R G+ E+A+ +F M R + +TF +L+C + ++G
Sbjct: 376 MEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCIVGRIDGKS 435
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ V+K G F V AL+ +Y + L+ +VFE M K +++W S+V+ + ++G
Sbjct: 436 VHCLVIKTG-FENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNG 494
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
E+ + FC++ S V+ + ++ + LEFG+Q+H IK G L V N
Sbjct: 495 SHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNN 554
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
SLV MY +C + A+ +F + +RDV++W +I A + +L+ + +M
Sbjct: 555 SLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQM 607
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 124/295 (42%), Gaps = 58/295 (19%)
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN------------- 449
+++ +N + +++GQ ++ +L ++ + D +WN +++ A+
Sbjct: 113 QSIFHSNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGF 172
Query: 450 ------------------GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
G E +LFK MR P YT S+L CS L + G
Sbjct: 173 SSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGE 232
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT--DRNVITWTALISALG 549
+HG + K S+ +V L+DMY KC I + +F + N + WTA+++
Sbjct: 233 MIHGYVVKNG-FESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYA 291
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-----------HGGLVREGMELFER 598
NG +A+E FR M G + ++ ++LTAC HG +VR G
Sbjct: 292 QNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNG------ 345
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+G + +VD+ + G L A++++ M + + W + + GC R
Sbjct: 346 ----FGCNAYVQ--SALVDMYAKCGDLGSAKRVLENME-DDDVVSWNSMIVGCVR 393
>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
Length = 1305
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 180/633 (28%), Positives = 292/633 (46%), Gaps = 100/633 (15%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + ++K GL +D V +AL+G YGR LD +F++MP++ + WN IV +
Sbjct: 543 GFTIHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNL 602
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G E + LF + S +S+ V ++ SN++ G QIHG V++ GF+ +
Sbjct: 603 QSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVS 662
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII-------------GALAESENFG 224
+ NSL+ MY + + S+ K+F + R++ SWN+I+ G L E E G
Sbjct: 663 MCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCG 722
Query: 225 ----------------------KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
A+ + R+ + + PN ++ ++ + LGK
Sbjct: 723 LKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGK 782
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
+IH VI+N L DV+V + L+D Y K L A + F + KNIV+WN+LI G
Sbjct: 783 AIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISG----- 837
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRM---GYENYEYVLGSL 379
+++ +L+ + A LI RM G ++ SL
Sbjct: 838 --------------------LSYTGLLKEAEA--------LISRMEKEGIKSNAVTWNSL 869
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
++ YA G ALA V G + G P++VSW
Sbjct: 870 VSGYATWGKTEKALAVV----------------GKMKKNGV------------EPNVVSW 901
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+++ C+ NG++ L++F M+ + P++ T SLL L L G +H K
Sbjct: 902 TAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLK 961
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
++ D V L+DMY K G + S+ +IF + ++ + +W +I + + +
Sbjct: 962 NN-LTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIA 1020
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
F M G +PD + +VL+ C++ GLVREG + F+ M YGV P ++H C+V+LL
Sbjct: 1021 VFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIEHCSCMVELL 1080
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G+L EA I TMP P+A IW FL C+
Sbjct: 1081 GRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCK 1113
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 127/508 (25%), Positives = 243/508 (47%), Gaps = 26/508 (5%)
Query: 164 HGLVIKNGFDYEL-LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
H ++K +EL ++ L+ Y + A +F R+ VSW L ++E+
Sbjct: 444 HARMMKLIDRFELEFISKCLITRYLEFGEFGYASAVFFLGFPRNQVSWRDF---LEKAED 500
Query: 223 FG----KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE-CDV 277
FG K LE ++R+ V ++ V CA L LG +IH +IK L+ D
Sbjct: 501 FGVEKYKVLEEFVRLQNKGVNFDEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDT 560
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL- 336
V SAL+ FY +C +L+ A+ F E+ ++ ++WN +++ + L +++
Sbjct: 561 RVVSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFS 620
Query: 337 GYRPNEFTFSHVLR---SSLAF-QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
G + + T +L+ + F Q Q+H ++R+G+E+ + SL+ Y+++G + +
Sbjct: 621 GAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESS 680
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAH 448
++ + R + N I Y R G ++ + LL ++E +PDIV+WN +++ A
Sbjct: 681 RKVFNSM-VDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYAS 739
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
++ + + K ++ A + P+ + SLL A + + LG ++HG + + ++ D +
Sbjct: 740 KALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLW-YDVY 798
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V LIDMY K G + + +F+ M ++N++ W +LIS L G + A ME G
Sbjct: 799 VETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEG 858
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
K + V ++++ G + + + +M ++ GVEP + + ++ + G+
Sbjct: 859 IKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKN-GVEPNVVSWTAILSGCSKNGNFGNG 917
Query: 629 EKIITTMP---FPPNALIWRTFLE--GC 651
KI M PN+ + L GC
Sbjct: 918 LKIFLKMQEEGVSPNSATISSLLRILGC 945
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 200/494 (40%), Gaps = 106/494 (21%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS----------- 49
M DRN+ S+NSI+S+Y+R GYV+DA+ + M G +P T+ LLS
Sbjct: 687 MVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDA 746
Query: 50 --------CDSLNPVE------------------GAQLQASVLKNGLFCADAFVGTALLG 83
L P G + V++N L+ D +V T L+
Sbjct: 747 IAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWY-DVYVETTLID 805
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
+Y + G L VF+ M K++V WNS++S G +++ L + + + +
Sbjct: 806 MYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVT 865
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
+ ++ G + E + G + KNG +
Sbjct: 866 WNSLVSGYATWGKTEKALAVVGKMKKNGVE------------------------------ 895
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
+VVSW I+ +++ NFG L+++L+M + V PN T ++ L GK
Sbjct: 896 -PNVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKE 954
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KS 322
+H+ +KN L D V +ALVD YAK +L+ A F I NK + SWN +I+GYA +
Sbjct: 955 VHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRR 1014
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTS 382
I + +L+ G P+ TF+ VL +
Sbjct: 1015 GEEGIAVFNAMLEAGIEPDAITFTSVL-------------------------------SV 1043
Query: 383 YAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIV 437
SGL+ + + + V+P + + + R+G +E + + +PD
Sbjct: 1044 CKNSGLVREGWKYFDLMRSHYGVIPTIEHCSCMVELLGRSGYLDEAWDFIRTMPLKPDAT 1103
Query: 438 SWNIVIAACAHNGD 451
W +++C + D
Sbjct: 1104 IWGAFLSSCKIHRD 1117
>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 166/602 (27%), Positives = 288/602 (47%), Gaps = 34/602 (5%)
Query: 51 DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWN 110
D L+P + ++ N ++ D F+ L+ Y GCL+ VF+++P+ V N
Sbjct: 70 DELSPSN----REIIITNPIY-GDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCN 124
Query: 111 SIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
++V+ + ++ DC+ L + R + + + D E G ++ GL +
Sbjct: 125 AMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCK 184
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
G + +S++N + I A+ F + +DVV WN +IG + F + L+
Sbjct: 185 GLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLF 244
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
L M + + P+ T + +I SC ++N GK +H V+ + D V + L+D Y K
Sbjct: 245 LDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKS 304
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLR 350
++E A F + ++N+VSWN +I GY LL+E L+L F ++
Sbjct: 305 GDVESARWIFENMPSRNLVSWNVMISGYVQNG------LLVETLRL--------FQKLIM 350
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ F + LI T+ G I + L++ V+P I
Sbjct: 351 DDVGFDSGTVVSLIQLCSR-----------TADLDGGKILHGFIYRRGLDL-NLVLPTAI 398
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ +Y + G + +++ +++SW ++ A NG ++ L+LF M+ R+ +
Sbjct: 399 V-DLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFN 457
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
T VSL+ C+ L L G S+H + + +S+ V LIDMY KC I S+ +F
Sbjct: 458 ALTLVSLVYCCTLLGLLREGRSVHATLTRFHF-ASEVVVMTALIDMYAKCSKINSAEMVF 516
Query: 531 N-EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
+T ++VI + ++IS G++G +AL + M G +P+ +++L+AC H GLV
Sbjct: 517 KYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLV 576
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG+ LF+ M + + P Y C+VDLL R G L++AE++I MPF P + I T L
Sbjct: 577 EEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLN 636
Query: 650 GC 651
GC
Sbjct: 637 GC 638
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 218/439 (49%), Gaps = 40/439 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSL-NPVEG 58
M +++VV +N +I + + G + +FL M+ EP+ T L+ SC + N G
Sbjct: 216 MVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFG 275
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ VL G+ D V T L+ +Y + G ++ +FE+MP ++LV+WN ++S + +
Sbjct: 276 KCMHGFVLGFGM-SRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQ 334
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + + LF +L+ +V + V +I S DL+ G+ +HG + + G D L++
Sbjct: 335 NGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVL 394
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++V++Y +C + A +F+ ++ ++V+SW ++ LA++ + AL+L+ +M + V
Sbjct: 395 PTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERV 454
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N T V ++ C L G+S+HA + + +V V +AL+D YAKC + A +
Sbjct: 455 TFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEM 514
Query: 299 CFS-EISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F ++ K+++ +N++I GY ++ + + + G +PNE TF
Sbjct: 515 VFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFV---------- 564
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN----IIA 412
SL+++ + SGL+ + +A + P + I
Sbjct: 565 ---------------------SLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIV 603
Query: 413 GIYNRTGQYNETVKLLSQL 431
+ +R G+ + +L++Q+
Sbjct: 604 DLLSRAGRLRQAEELINQM 622
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 128/547 (23%), Positives = 247/547 (45%), Gaps = 53/547 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
+P V N++++ Y + D + + M E +T L +C L E G
Sbjct: 115 IPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMG 174
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ + GL F+G+++L + G + F M K +V WN ++ F +
Sbjct: 175 MEVIGLAVCKGL-AGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQ 233
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + LF +++ +++ + + + +I ++L FG+ +HG V+ G + V
Sbjct: 234 EGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRV 293
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+L++MY + + SA +F+++ R++VSWN +I ++ + L L+ ++ +D V
Sbjct: 294 LTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDV 353
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ T V +I C+ + GK +H + + L+ ++ + +A+VD YAKC +L A
Sbjct: 354 GFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASS 413
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF--Q 356
F + NKN++SW A+++G A L + +Q TF+ + SL +
Sbjct: 414 VFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQ----NERVTFNALTLVSLVYCCT 469
Query: 357 LLQL-------HCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPA 408
LL L H + R + + V+ +L+ YAK I+ A + F
Sbjct: 470 LLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVF------------- 516
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+Y T K D++ +N +I+ +G + L ++ M +
Sbjct: 517 -----------KYGLTPK--------DVILYNSMISGYGMHGLGHKALCVYHRMNREGLQ 557
Query: 469 PDNYTFVSLLSACSKLCNLALGSSL-HGLIKKTEIISSDT-FVCNMLIDMYGKCGSIGSS 526
P+ TFVSLLSACS + G +L ++K +D + C ++D+ + G + +
Sbjct: 558 PNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYAC--IVDLLSRAGRLRQA 615
Query: 527 VKIFNEM 533
++ N+M
Sbjct: 616 EELINQM 622
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/526 (22%), Positives = 231/526 (43%), Gaps = 41/526 (7%)
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
+L +EV++ E +G G + E ++I N + + LV Y
Sbjct: 44 QLTGNEVSMVEQKKIGNDLGDCSICLDELSPSNREIIITNPIYGDQFLVAKLVAAYSSLG 103
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
+ +A K+F ++ V N ++ ++E + +EL MS + + T + +
Sbjct: 104 CLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALK 163
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+C L + +G + + L F+GS++++F K ++ A F ++ K++V
Sbjct: 164 ACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVC 223
Query: 311 WNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLII 365
WN +I G+ + + L +++L P+ T +++S + L +H ++
Sbjct: 224 WNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVL 283
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP-RAVVPANIIAGIYNRTGQYNET 424
G VL +L+ Y KSG + A N+P R +V N++ Y + G ET
Sbjct: 284 GFGMSRDTRVLTTLIDMYCKSGDVESARWIFE--NMPSRNLVSWNVMISGYVQNGLLVET 341
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
++L +L D+ D+ T VSL+ CS+
Sbjct: 342 LRLFQKLIMDDVGF-------------------------------DSGTVVSLIQLCSRT 370
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
+L G LHG I + + + + ++D+Y KCGS+ + +F M ++NVI+WTA+
Sbjct: 371 ADLDGGKILHGFIYRRG-LDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAM 429
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
+ L NG A+ AL+ F +M+ + + L++++ C GL+REG + + R +
Sbjct: 430 LVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTR-FH 488
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
E+ ++D+ + + AE + P + +++ + + G
Sbjct: 489 FASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISG 534
>gi|255565109|ref|XP_002523547.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537254|gb|EEF38886.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 555
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 174/569 (30%), Positives = 286/569 (50%), Gaps = 43/569 (7%)
Query: 32 MINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
M+ G P TF +L D+LN +G ++ V K G F D FVG LL YG G
Sbjct: 1 MVRNGIRPDDHTFPFVLKACADNLNVQKGMEIHGCVFKLG-FDFDVFVGNTLLLFYGNTG 59
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL-VRSEVALTESSFVGVI 148
L + VF++M + +V+WN+++ F +GF + LF E+ +RS + V V+
Sbjct: 60 YLSDAKKVFDEMLERDVVSWNTLLGAFSVNGFYLKALDLFYEMNLRSGFRPNMVTVVSVL 119
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
+ +D +IH V+K G D ++ + N+LV++Y +C + S+ ++F ++ R+ V
Sbjct: 120 PVCAALEDEVVASEIHCYVVKIGLDSQVTLCNALVDVYGKCGNLKSSRRVFDEMMERNEV 179
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SWN II +LA E+ ALE + M + V PN T ++ L++ LGK IH
Sbjct: 180 SWNAIITSLAYMEHNKDALEAFRLMINEEVKPNSVTIASILPVLVELEHFDLGKEIHGFS 239
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
++ +E DVF+ ++L+D YAK + A + F ++ KN+VSWNA++ +A +
Sbjct: 240 LRFGIESDVFISNSLIDMYAKSGHSTQASVVFHLMTEKNVVSWNAMVANFAQNRFELAAI 299
Query: 329 LLIELLQL-GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSY 383
L+ +Q G PN TF++ L + L ++H RMG ++V +L Y
Sbjct: 300 ELVRQMQTDGAIPNPVTFTNALPACARMGFLRPGKEIHARAFRMGCYFDQFVSNALTDMY 359
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
AK G LN+ R V +N +++ D VS+NI+I
Sbjct: 360 AKCGF----------LNLARNV---------------FNISLR--------DEVSYNILI 386
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
+ + E L LF M + D +++ +++AC+ L L G +H L+ + +
Sbjct: 387 VGYSQTTNSSESLSLFLEMGLVGMERDVVSYMGVIAACASLVALKQGEEIHALVVRKN-L 445
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFRE 563
F+ N L+D Y KCG I + KIF +++++ +W +I +G+ G + A+ F
Sbjct: 446 HMHIFIANSLLDFYTKCGKIDLACKIFYRISEKDAASWNTIILGVGMLGELEAAINLFEA 505
Query: 564 MEFLGFKPDRVALIAVLTACRHGGLVREG 592
M G + D V+ IAVL+AC HGGLV +G
Sbjct: 506 MREDGVEYDSVSYIAVLSACSHGGLVEKG 534
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/490 (27%), Positives = 241/490 (49%), Gaps = 42/490 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLLS-CDSL-NPVE 57
M +R+VVS+N+++ A+S G+ AL +F M + GF P T +L C +L + V
Sbjct: 71 MLERDVVSWNTLLGAFSVNGFYLKALDLFYEMNLRSGFRPNMVTVVSVLPVCAALEDEVV 130
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+++ V+K GL + + AL+ +YG+ G L VF++M ++ V+WN+I++
Sbjct: 131 ASEIHCYVVKIGL-DSQVTLCNALVDVYGKCGNLKSSRRVFDEMMERNEVSWNAIITSLA 189
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+D + F ++ EV + ++ L + + G++IHG ++ G + ++
Sbjct: 190 YMEHNKDALEAFRLMINEEVKPNSVTIASILPVLVELEHFDLGKEIHGFSLRFGIESDVF 249
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
++NSL++MY + A +F + ++VVSWN ++ A++ A+EL +M D
Sbjct: 250 ISNSLIDMYAKSGHSTQASVVFHLMTEKNVVSWNAMVANFAQNRFELAAIELVRQMQTDG 309
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN TF + +CA + GK IHA+ + D FV +AL D YAKC L A
Sbjct: 310 AIPNPVTFTNALPACARMGFLRPGKEIHARAFRMGCYFDQFVSNALTDMYAKCGFLNLAR 369
Query: 298 LCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F+ IS ++ VS+N LI+GY+ + +S S+ L +E+ +G + ++ V+ + +
Sbjct: 370 NVFN-ISLRDEVSYNILIVGYSQTTNSSESLSLFLEMGLVGMERDVVSYMGVIAACASLV 428
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L ++H L++R + ++ SL+ Y K G I A
Sbjct: 429 ALKQGEEIHALVVRKNLHMHIFIANSLLDFYTKCGKIDLA-------------------- 468
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K+ ++ D SWN +I G+ + + LF+ MR + D+
Sbjct: 469 ------------CKIFYRISEKDAASWNTIILGVGMLGELEAAINLFEAMREDGVEYDSV 516
Query: 473 TFVSLLSACS 482
+++++LSACS
Sbjct: 517 SYIAVLSACS 526
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 171/368 (46%), Gaps = 39/368 (10%)
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ TF +V+ +CA N G IH V K + DVFVG+ L+ FY L A
Sbjct: 8 PDDHTFPFVLKACADNLNVQKGMEIHGCVFKLGFDFDVFVGNTLLLFYGNTGYLSDAKKV 67
Query: 300 FSEISNKNIVSWNALILGYASKS-SPTSIFLLIEL-LQLGYRPNEFTFSHVLRSSLAFQ- 356
F E+ +++VSWN L+ ++ ++ L E+ L+ G+RPN T VL A +
Sbjct: 68 FDEMLERDVVSWNTLLGAFSVNGFYLKALDLFYEMNLRSGFRPNMVTVVSVLPVCAALED 127
Query: 357 ---LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
++HC ++++G ++ V N +
Sbjct: 128 EVVASEIHCYVVKIGLDS--------------------------------QVTLCNALVD 155
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y + G + ++ ++ + VSWN +I + A+ K+ LE F+ M + P++ T
Sbjct: 156 VYGKCGNLKSSRRVFDEMMERNEVSWNAIITSLAYMEHNKDALEAFRLMINEEVKPNSVT 215
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
S+L +L + LG +HG + I SD F+ N LIDMY K G + +F+ M
Sbjct: 216 IASILPVLVELEHFDLGKEIHGFSLRFGI-ESDVFISNSLIDMYAKSGHSTQASVVFHLM 274
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
T++NV++W A+++ N F A+E R+M+ G P+ V L AC G +R G
Sbjct: 275 TEKNVVSWNAMVANFAQNRFELAAIELVRQMQTDGAIPNPVTFTNALPACARMGFLRPGK 334
Query: 594 ELFERMNR 601
E+ R R
Sbjct: 335 EIHARAFR 342
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 162/331 (48%), Gaps = 46/331 (13%)
Query: 333 LLQLGYRPNEFTFSHVLRS---SLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
+++ G RP++ TF VL++ +L Q +++H + ++G++ +V +L+ Y +G
Sbjct: 1 MVRNGIRPDDHTFPFVLKACADNLNVQKGMEIHGCVFKLGFDFDVFVGNTLLLFYGNTGY 60
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
+SDA K+ ++ D+VSWN ++ A +
Sbjct: 61 LSDA--------------------------------KKVFDEMLERDVVSWNTLLGAFSV 88
Query: 449 NGDYKEVLELFKYMR-AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
NG Y + L+LF M + P+ T VS+L C+ L + + S +H + K + S T
Sbjct: 89 NGFYLKALDLFYEMNLRSGFRPNMVTVVSVLPVCAALEDEVVASEIHCYVVKIGLDSQVT 148
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
+CN L+D+YGKCG++ SS ++F+EM +RN ++W A+I++L + ALE FR M
Sbjct: 149 -LCNALVDVYGKCGNLKSSRRVFDEMMERNEVSWNAIITSLAYMEHNKDALEAFRLMINE 207
Query: 568 GFKPDRV---ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
KP+ V +++ VL H L +E + +G+E ++ + ++D+ + GH
Sbjct: 208 EVKPNSVTIASILPVLVELEHFDLGKE----IHGFSLRFGIESDVFISNSLIDMYAKSGH 263
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
+A + M N + W + + R
Sbjct: 264 STQASVVFHLMT-EKNVVSWNAMVANFAQNR 293
>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01030, mitochondrial; Flags: Precursor
gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 171/634 (26%), Positives = 300/634 (47%), Gaps = 102/634 (16%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + ++K GL +D V +A +G YGR L +F++MP++ + WN IV +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G E + LF E+ S +S+ V ++ SN++ G QIHG V++ G + +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTI-------------IGALAESENFG 224
+ NSL+ MY + + + K+F ++ R++ SWN+I IG L E E G
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 225 ----------------------KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
A+ + RM + + P+ ++ ++ + A + LGK
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
+IH +++N L DV+V + L+D Y K L A + F + KNIV+WN+L+ G
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG----- 300
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTS 382
+++ +L+ + A L+IRM
Sbjct: 301 --------------------LSYACLLKDAEA--------LMIRM--------------- 317
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER----PDIVS 438
K G+ DA+ + N +A Y G+ + + ++ +++ P++VS
Sbjct: 318 -EKEGIKPDAITW-------------NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
W + + C+ NG+++ L++F M+ + P+ T +LL L L G +HG
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCL 423
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
+ +I D +V L+DMYGK G + S+++IF + ++++ +W ++ + G + +
Sbjct: 424 RKNLIC-DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGI 482
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDL 618
F M G +PD + +VL+ C++ GLV+EG + F+ M YG+ P ++H C+VDL
Sbjct: 483 AAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDL 542
Query: 619 LVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L R G+L EA I TM P+A IW FL C+
Sbjct: 543 LGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCK 576
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 125/591 (21%), Positives = 240/591 (40%), Gaps = 109/591 (18%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP--VEG 58
MP R+ +++N I+ R G E A+ +F M G + T LL S EG
Sbjct: 49 MPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEG 108
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL------------ 106
Q+ VL+ GL ++ + +L+ +Y R+G L+ VF M ++L
Sbjct: 109 RQIHGYVLRLGLE-SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTK 167
Query: 107 -----------------------VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
VTWNS++S + G +D + + + + + + SS
Sbjct: 168 LGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSS 227
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
++ ++ L+ G+ IHG +++N Y++ V +L++MY + + A +F ++
Sbjct: 228 ISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD 287
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
+++V+WN+++ L+ + A L +RM + + P+ T+
Sbjct: 288 AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW------------------ 329
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK----NIVSWNALILGYA 319
++L YA E A ++ K N+VSW A+ G +
Sbjct: 330 -----------------NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCS 372
Query: 320 SKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCL-IIRMGYENYEYVLG 377
+ ++ + I++ + G PN T S +L+ L CL ++ G E + + L
Sbjct: 373 KNGNFRNALKVFIKMQEEGVGPNAATMSTLLKI--------LGCLSLLHSGKEVHGFCL- 423
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
+ LI DA A + +Y ++G +++ ++ +
Sbjct: 424 -------RKNLICDAYV-------------ATALVDMYGKSGDLQSAIEIFWGIKNKSLA 463
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SWN ++ A G +E + F M A + PD TF S+LS C + G L+
Sbjct: 464 SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLM 523
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISA 547
+ I C+ ++D+ G+ G + + M+ + + W A +S+
Sbjct: 524 RSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSS 574
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
LG ++HG + K + +SDT V + + YG+C S+G + K+F+EM R+ + W ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
+G ++A+E FREM+F G K ++ +L C + EG ++ + R G+E
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR-LGLESN 123
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ + ++ + R G L+ + K+ +M N W + L
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSIL 162
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 154/565 (27%), Positives = 270/565 (47%), Gaps = 41/565 (7%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFV--GVIHGLSNE 154
VF+++PR V+WNS+++ G D L ++ LT S+F + +
Sbjct: 51 VFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDM--HARGLTASTFALGSALRSAAAA 108
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+ E G Q+ +K+G + A++L+++Y +C + A ++F + +R+ VSWN +I
Sbjct: 109 RRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALI 168
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
AES +A+EL+L M + P+ TF ++ + G L + +H K+ K
Sbjct: 169 AGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSA 228
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA--SKSSPTSIFLLIE 332
+ V +A + Y++C + F I +++++SWN+++ YA F +
Sbjct: 229 LGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRM 288
Query: 333 LLQLGYRPNEFTFSHVLRSSLAF-----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
+ + G +P+ ++F+ V+ Q +H L++++G E +V +++ Y +
Sbjct: 289 MRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTR-- 346
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
+ + K L D VSWN ++ +
Sbjct: 347 ---------------------------FTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYS 379
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
H+G + L F++MRA + D + + L +CS L L LG +H L+ ++ S+D
Sbjct: 380 HHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSGFSSND- 438
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
FV + LI MY KCG +G + K F E + + W +++ +G AQ + F EM
Sbjct: 439 FVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDH 498
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
D V +A+LTA HGGLV EG E+ M Y + M+HY C VDL R G L +
Sbjct: 499 KVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACGVDLYGRAGQLDK 558
Query: 628 AEKIITTMPFPPNALIWRTFLEGCQ 652
A+++I +MPF P+A++W T L C+
Sbjct: 559 AKELIESMPFQPDAMVWMTLLGACR 583
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/567 (26%), Positives = 277/567 (48%), Gaps = 50/567 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLN--PVEG 58
+P + VS+NS+++A+ G DA R+ M RG + F G L + P G
Sbjct: 55 IPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHARGLTASTFALGSALRSAAAARRPELG 114
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
AQLQ+ +K+GL + F +ALL +Y + G L + VF+ MP ++ V+WN++++ + +
Sbjct: 115 AQLQSFAVKSGL-VDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYAE 173
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
M LF E+ R E+ +++F ++ + +Q+HG + K G L+V
Sbjct: 174 SRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGLVV 233
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI- 237
N+ + Y QC + ++F ++ RD++SWN+++GA A +A+ ++RM +
Sbjct: 234 LNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRESG 293
Query: 238 VFPNQTTFVYVINSCAGLQ-NSILGKSIHAKVIKNALECDVFVGSALVDFYAK-CDN--L 293
V P+ +F V++ C+ + G+SIH+ V+K LE V +A++ Y + +N +
Sbjct: 294 VQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMM 353
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSS 352
E A+ CF + K+ VSWN+++ GY+ + ++ +EF S LRS
Sbjct: 354 EDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSC 413
Query: 353 LAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+L Q+H L+I+ G+ + ++V SL+ Y+K G++ DA
Sbjct: 414 SDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDAR--------------- 458
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
K + ++ V WN ++ A +G + V +LF M ++
Sbjct: 459 -----------------KSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVP 501
Query: 469 PDNYTFVSLLSACSKLCNLALGSS-LHGLIKKTEI-ISSDTFVCNMLIDMYGKCGSIGSS 526
D+ TFV+LL+A S + GS L+ + + +I + + + C +D+YG+ G + +
Sbjct: 502 LDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACG--VDLYGRAGQLDKA 559
Query: 527 VKIFNEMT-DRNVITWTALISALGLNG 552
++ M + + W L+ A ++G
Sbjct: 560 KELIESMPFQPDAMVWMTLLGACRIHG 586
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 166/365 (45%), Gaps = 39/365 (10%)
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRS 351
L A F EI + VSWN+L+ + + + + LL ++ G + F LRS
Sbjct: 45 LAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHARGLTASTFALGSALRS 104
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANI 410
+ A + +L G+ + S+A KSGL+ + V A+
Sbjct: 105 AAAARRPEL----------------GAQLQSFAVKSGLVDN-------------VFSASA 135
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ +Y + G+ ++ ++ + + VSWN +IA A + + +ELF M+ + PD
Sbjct: 136 LLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPD 195
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ TF +LL+ +L LHG I K + V N I Y +CG+ S +IF
Sbjct: 196 DATFAALLATVEGPSWYSLMQQLHGKIAKYGS-ALGLVVLNAAITAYSQCGAFADSRRIF 254
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKF-REMEFLGFKPDRVALIAVLTAC-RHGGL 588
+ + R++I+W +++ A +G A+ F R M G +PD + +V++ C HG
Sbjct: 255 DGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCD 314
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH---LKEAEKIITTMPFPPNALIWR 645
R+G + + + G+E + ++ + R+ +++A K ++ F +A+ W
Sbjct: 315 DRQGRSIHSLVVK-IGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVF-KDAVSWN 372
Query: 646 TFLEG 650
+ L G
Sbjct: 373 SMLTG 377
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 171/581 (29%), Positives = 281/581 (48%), Gaps = 42/581 (7%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED---CMFLFCELV 133
+ L+ LY G + F+ + + + WN ++S +G+ G + C LF ++
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--ML 145
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
S + +F V+ D G +IH L +K GF +++ VA SL+++Y + +
Sbjct: 146 SSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVG 202
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
+A +F ++ +RD+ SWN +I +S N +AL L S + + T V ++++C
Sbjct: 203 NARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL----SNGLRAMDSVTVVSLLSACT 258
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+ G +IH+ IK+ LE ++FV + L+D YA+ L F + ++++SWN+
Sbjct: 259 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNS 318
Query: 314 LILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY 372
+I Y P L + ++L +P+ T SLA L QL
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI-----SLASILSQL------------ 361
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
G + + G F+ + I AVV +Y + G + + + L
Sbjct: 362 ----GDIRACRSVQGFTLRKGWFLEDITIGNAVVV------MYAKLGLVDSARAVFNWLP 411
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRA-ARIYPDNYTFVSLLSACSKLCNLALGS 491
D++SWN +I+ A NG E +E++ M I + T+VS+L ACS+ L G
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
LHG + K + D FV L DMYGKCG + ++ +F ++ N + W LI+ G +
Sbjct: 472 KLHGRLLKNGLYL-DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFH 530
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G ++A+ F+EM G KPD + + +L+AC H GLV EG FE M YG+ P + H
Sbjct: 531 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 590
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y C+VD+ R G L+ A K I +M P+A IW L C+
Sbjct: 591 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACR 631
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 151/592 (25%), Positives = 286/592 (48%), Gaps = 53/592 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMF-LYMINRGFEPTQFTFGGLL-SCDSLNPVEG 58
+ +R+V ++N +IS Y R G + +R F L+M++ G P TF +L +C ++ ++G
Sbjct: 112 IQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV--IDG 169
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ LK G F D +V +L+ LY R+ + +F++MP + + +WN+++S + +
Sbjct: 170 NKIHCLALKFG-FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ + L L A+ + V ++ + D G IH IK+G + EL V
Sbjct: 229 SGNAKEALTLSNGL----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N L+++Y + + +K+F + +RD++SWN+II A +E +A+ L+ M + +
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI 344
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA--LECDVFVGSALVDFYAKCDNLEGA 296
P+ T + + + + L + +S+ ++ LE D+ +G+A+V YAK ++ A
Sbjct: 345 QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKLGLVDSA 403
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL--GYRPNEFTFSHVL----R 350
F+ + N +++SWN +I GYA + + +++ N+ T+ VL +
Sbjct: 404 RAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ 463
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ Q ++LH +++ G +V+ SL Y K G + DAL+
Sbjct: 464 AGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS---------------- 507
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
L Q+ R + V WN +IA +G ++ + LFK M + PD
Sbjct: 508 ----------------LFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPD 551
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ TFV+LLSACS + G +++ I+ ++DMYG+ G + +++K
Sbjct: 552 HITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFI 611
Query: 531 NEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
M+ + W AL+SA ++G L K +P+ V +L+
Sbjct: 612 KSMSLQPDASIWGALLSACRVHGNVD--LGKIASEHLFEVEPEHVGYHVLLS 661
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 231/496 (46%), Gaps = 40/496 (8%)
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
+L+ + +H ++ + + ++ LVN+Y + A F ++ RDV +WN +I
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 216 ALAESENFGKALELY-LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
+ N + + + L M + P+ TF V+ +C + I G IH +K
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFM 182
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
DV+V ++L+ Y++ + A + F E+ +++ SWNA+I GY
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYC--------------- 227
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDAL 393
Q G T S+ LR+ + ++ L G ++ G + SY+ K GL S+
Sbjct: 228 QSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAG----DFNRGVTIHSYSIKHGLESELF 283
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
+N + +Y G+ + K+ ++ D++SWN +I A N
Sbjct: 284 V-------------SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
+ LF+ MR +RI PD T +SL S S+L ++ S+ G + D + N +
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG-FKPD 572
+ MY K G + S+ +FN + + +VI+W +IS NGFA A+E + ME G +
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 573 RVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII 632
+ ++VL AC G +R+GM+L R+ ++ G+ ++ + D+ + G L++A +
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 633 TTMPFPPNALIWRTFL 648
+P N++ W T +
Sbjct: 510 YQIP-RVNSVPWNTLI 524
>gi|302803089|ref|XP_002983298.1| hypothetical protein SELMODRAFT_10719 [Selaginella moellendorffii]
gi|300148983|gb|EFJ15640.1| hypothetical protein SELMODRAFT_10719 [Selaginella moellendorffii]
Length = 559
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 163/504 (32%), Positives = 248/504 (49%), Gaps = 22/504 (4%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L G++IH + +G + + N L+ MY +C A+ +F + D SW +I A
Sbjct: 11 LSQGKRIHAHIHHSGLAHSTHLQNRLIQMYGKCRRPREAQLVFDHIRAPDADSWMNLIAA 70
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
S +AL LY M D+ PN + VI +C+ L++ G+ IH ++I++ D
Sbjct: 71 FVRSGAEREALHLYAAM--DVSPPNPFVYPSVIKACSVLRDLAQGREIHRRIIQHQHCLD 128
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
+ALVD YAKC +LE A FS I K +VSW A+I GY + + + L
Sbjct: 129 AVTSTALVDMYAKCGDLETAATIFSSIQEKTLVSWAAMISGYVRNERYSRAIGIFHRMNL 188
Query: 337 -GYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYE--YVLGSLMTSYAKSGLI 389
G P++F S +L + Q L +H I+ V +LM YA G +
Sbjct: 189 EGLEPDDFILSSLLLACSKIQALDQGRTIHARILSSSSPAATNLVVETALMVMYANCGSL 248
Query: 390 SDALAFVTALNIPRAVVPANIIAGI--YNRTGQYNETVKLL------SQLERPDIVSWNI 441
DA + ++ ++ A +I Y TG ++++ Q + WN
Sbjct: 249 IDAKSMFDGMSSKDSIAWATMIEAYFRYGDTGAGIAALRVMILEGVKPQANFRTVECWNS 308
Query: 442 VIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
VI A A G +E L+LF+ M + + + PD T +L AC+ + L G ++H +K
Sbjct: 309 VILALASAGREREALDLFQEMEKTSALVPDAVTLNRILGACAAIGALDEGRAIHSQLK-- 366
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
I D V N L+ MY KCGS+ + ++F+ M +RNV+ WTA++ AL +GF LEK
Sbjct: 367 --IHPDGPVGNSLVHMYAKCGSLMEARQVFDGMLERNVVGWTAMVVALAHHGFHGECLEK 424
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
FR M G PD VA +L C H GLV G F M + +G+EP + Y +VDL+
Sbjct: 425 FRLMRHHGIDPDGVAFTNLLNCCSHAGLVSRGWMFFAAMTQDHGMEPTGEQYEVMVDLVA 484
Query: 621 RYGHLKEAEKIITTMPFPPNALIW 644
R G L+ AE+++ MPF P+ W
Sbjct: 485 RCGRLEVAEELMEAMPFQPDEEGW 508
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/528 (21%), Positives = 240/528 (45%), Gaps = 22/528 (4%)
Query: 47 LLSC-DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS 105
L SC D+ + +G ++ A + +GL + L+ +YG+ E VF+ +
Sbjct: 2 LRSCNDAAHLSQGKRIHAHIHHSGL-AHSTHLQNRLIQMYGKCRRPREAQLVFDHIRAPD 60
Query: 106 LVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFV--GVIHGLSNEQDLEFGEQI 163
+W ++++ F + G + + L+ + S + FV VI S +DL G +I
Sbjct: 61 ADSWMNLIAAFVRSGAEREALHLYAAMDVS----PPNPFVYPSVIKACSVLRDLAQGREI 116
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H +I++ + + + +LV+MY +C + +A +F ++ + +VSW +I +E +
Sbjct: 117 HRRIIQHQHCLDAVTSTALVDMYAKCGDLETAATIFSSIQEKTLVSWAAMISGYVRNERY 176
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA--LECDVFVGS 281
+A+ ++ RM+++ + P+ ++ +C+ +Q G++IHA+++ ++ ++ V +
Sbjct: 177 SRAIGIFHRMNLEGLEPDDFILSSLLLACSKIQALDQGRTIHARILSSSSPAATNLVVET 236
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL------- 334
AL+ YA C +L A F +S+K+ ++W +I Y + + ++
Sbjct: 237 ALMVMYANCGSLIDAKSMFDGMSSKDSIAWATMIEAYFRYGDTGAGIAALRVMILEGVKP 296
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY----EYVLGSLMTSYAKSGLIS 390
Q +R E S +L + A + + L M + L ++ + A G +
Sbjct: 297 QANFRTVECWNSVILALASAGREREALDLFQEMEKTSALVPDAVTLNRILGACAAIGALD 356
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
+ A + L I N + +Y + G E ++ + ++V W ++ A AH+G
Sbjct: 357 EGRAIHSQLKIHPDGPVGNSLVHMYAKCGSLMEARQVFDGMLERNVVGWTAMVVALAHHG 416
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
+ E LE F+ MR I PD F +LL+ CS ++ G + + +
Sbjct: 417 FHGECLEKFRLMRHHGIDPDGVAFTNLLNCCSHAGLVSRGWMFFAAMTQDHGMEPTGEQY 476
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRA 557
+++D+ +CG + + ++ M + W ++ A G +RA
Sbjct: 477 EVMVDLVARCGRLEVAEELMEAMPFQPDEEGWLIVLGASKTQGDVERA 524
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 137/339 (40%), Gaps = 48/339 (14%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQ 60
++ +VS+ ++IS Y R A+ +F M G EP F LL +C + + +G
Sbjct: 157 EKTLVSWAAMISGYVRNERYSRAIGIFHRMNLEGLEPDDFILSSLLLACSKIQALDQGRT 216
Query: 61 LQASVLKNGLFCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVT----------- 108
+ A +L + A + V TAL+ +Y G L + S+F+ M K +
Sbjct: 217 IHARILSSSSPAATNLVVETALMVMYANCGSLIDAKSMFDGMSSKDSIAWATMIEAYFRY 276
Query: 109 -----------------------------WNSIVSIFGKHGFVEDCMFLFCELVRSEVAL 139
WNS++ G + + LF E+ ++ +
Sbjct: 277 GDTGAGIAALRVMILEGVKPQANFRTVECWNSVILALASAGREREALDLFQEMEKTSALV 336
Query: 140 TESSFVGVIHGLSNE-QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
++ + I G L+ G IH + + V NSLV+MY +C + A ++
Sbjct: 337 PDAVTLNRILGACAAIGALDEGRAIHSQL---KIHPDGPVGNSLVHMYAKCGSLMEARQV 393
Query: 199 FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
F + R+VV W ++ ALA G+ LE + M + P+ F ++N C+
Sbjct: 394 FDGMLERNVVGWTAMVVALAHHGFHGECLEKFRLMRHHGIDPDGVAFTNLLNCCSHAGLV 453
Query: 259 ILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEGA 296
G A + ++ +E +VD A+C LE A
Sbjct: 454 SRGWMFFAAMTQDHGMEPTGEQYEVMVDLVARCGRLEVA 492
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 19/223 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLL-SCDSLNPVEGAQL 61
R V +NS+I A + G +AL +F M P T +L +C ++ ++ +
Sbjct: 301 RTVECWNSVILALASAGREREALDLFQEMEKTSALVPDAVTLNRILGACAAIGALDEGRA 360
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
S LK D VG +L+ +Y + G L E VF+ M +++V W ++V HGF
Sbjct: 361 IHSQLK---IHPDGPVGNSLVHMYAKCGSLMEARQVFDGMLERNVVGWTAMVVALAHHGF 417
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG-------EQIHGLVIKNGFDY 174
+C+ F + + +F +++ S+ + G Q HG+ G Y
Sbjct: 418 HGECLEKFRLMRHHGIDPDGVAFTNLLNCCSHAGLVSRGWMFFAAMTQDHGME-PTGEQY 476
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
E+ +V++ +C + AE++ + + + D W ++GA
Sbjct: 477 EV-----MVDLVARCGRLEVAEELMEAMPFQPDEEGWLIVLGA 514
>gi|414585599|tpg|DAA36170.1| TPA: hypothetical protein ZEAMMB73_453858 [Zea mays]
Length = 829
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 184/668 (27%), Positives = 329/668 (49%), Gaps = 59/668 (8%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPT----QFTFG-GLLSCDSLNPVE-GAQLQ 62
+N+++ AY E ALR++ ++N PT +T+ L +C + G +
Sbjct: 101 YNALLIAYVARALPEHALRLYA-LLNHAARPTPRSDHYTYSCALTACARTRRLRLGKSVH 159
Query: 63 ASVLKNGLFCAD-AFVGTALLGLYGR------HGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
A +L+ D A + +LL +Y G +D V +F+ MP+++ V+WN++
Sbjct: 160 AHLLRRARSLPDTAVLRNSLLNVYASCVRYRGDGSVDVVRRLFDAMPKRNAVSWNTLFGW 219
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY- 174
+ K G ++ + +F ++ + T SFV V ++ E D + ++GL++K+G +Y
Sbjct: 220 YVKTGRPQEALEMFVRMLEDGIKPTPVSFVNVFPAVAKE-DPSWSFVLYGLLVKHGMEYV 278
Query: 175 -ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+L V +S + M+ + + SA ++F+ ++ WNT+I ++ F +A+ L +R+
Sbjct: 279 NDLFVVSSAIVMFSELGDVQSAWRVFEYAAKKNTEVWNTMITGYVQNGKFAEAMGLVIRL 338
Query: 234 SVDIVFP-NQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCD 291
V P + TF+ + + + Q+ LG+ +H +IK V +G+ALV Y++C
Sbjct: 339 MVSKEVPLDVVTFLSALTAASQSQDGRLGQQLHGYLIKGMHTTLPVILGNALVVMYSRCG 398
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLR 350
N++ A F + K+IVSWN +I + LL+ ++ + G+ + T + VL
Sbjct: 399 NVQTAFELFDRLHEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFAADLVTLTAVLS 458
Query: 351 SSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
++ L Q H +IR G E E + L+ YAKSG I
Sbjct: 459 AASNTGDLHIGKQAHSYLIRHGIEG-EGLESYLIDMYAKSGRI----------------- 500
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
I +++ G + D V+WN +IA G ++ + F+ M A
Sbjct: 501 --EIAQRVFDDYGN-----------AKRDEVTWNAMIAGYTQTGHPEQAILAFRAMIEAC 547
Query: 467 IYPDNYTFVSLLSACSKLCN-LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ P + T S+L AC L L G +H + + ++ FV L+DMY KCG I +
Sbjct: 548 LEPTSVTLASVLPACDPLGGGLCAGKQIHCFALR-RCLDTNVFVGTALVDMYSKCGEIST 606
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ +F +MT+++ +++T +IS LG +GF + AL F M+ G KPD V +A ++AC +
Sbjct: 607 AEHVFADMTEKSTVSYTTMISGLGQHGFGKSALSLFYSMQEKGLKPDGVTFLAAISACNY 666
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL-IW 644
GLV EG+ L+ M ++GV H C+VD+L + G ++EA + + + + + IW
Sbjct: 667 SGLVDEGLALYRSME-TFGVVVTPQHRCCIVDMLAKAGRVEEAYEFVQELGEEGDFVSIW 725
Query: 645 RTFLEGCQ 652
T L C+
Sbjct: 726 GTLLASCK 733
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 140/561 (24%), Positives = 263/561 (46%), Gaps = 48/561 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP RN VS+N++ Y + G ++AL MF+ M+ G +PT +F + + +P
Sbjct: 205 MPKRNAVSWNTLFGWYVKTGRPQEALEMFVRMLEDGIKPTPVSFVNVFPAVAKEDPSWSF 264
Query: 60 QLQASVLKNGL-FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L ++K+G+ + D FV ++ + ++ G + VFE +K+ WN++++ + +
Sbjct: 265 VLYGLLVKHGMEYVNDLFVVSSAIVMFSELGDVQSAWRVFEYAAKKNTEVWNTMITGYVQ 324
Query: 119 HGFVEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYEL 176
+G + M L L V EV L +F+ + S QD G+Q+HG +IK +
Sbjct: 325 NGKFAEAMGLVIRLMVSKEVPLDVVTFLSALTAASQSQDGRLGQQLHGYLIKGMHTTLPV 384
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++ N+LV MY +C + +A ++F + +D+VSWNT+I A +++ + L L +M
Sbjct: 385 ILGNALVVMYSRCGNVQTAFELFDRLHEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQKS 444
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ T V+++ + + +GK H+ +I++ +E + + S L+D YAK +E A
Sbjct: 445 GFAADLVTLTAVLSAASNTGDLHIGKQAHSYLIRHGIEGE-GLESYLIDMYAKSGRIEIA 503
Query: 297 HLCFSEISN--KNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRS-- 351
F + N ++ V+WNA+I GY P +I +++ P T + VL +
Sbjct: 504 QRVFDDYGNAKRDEVTWNAMIAGYTQTGHPEQAILAFRAMIEACLEPTSVTLASVLPACD 563
Query: 352 SLAFQLL---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
L L Q+HC +R + +V +L+ Y+K G IS A
Sbjct: 564 PLGGGLCAGKQIHCFALRRCLDTNVFVGTALVDMYSKCGEISTA---------------- 607
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+ + + VS+ +I+ +G K L LF M+ +
Sbjct: 608 ----------------EHVFADMTEKSTVSYTTMISGLGQHGFGKSALSLFYSMQEKGLK 651
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD TF++ +SAC+ + G +L+ ++ ++ + C ++DM K G + + +
Sbjct: 652 PDGVTFLAAISACNYSGLVDEGLALYRSMETFGVVVTPQHRC-CIVDMLAKAGRVEEAYE 710
Query: 529 IFNEMTDRN--VITWTALISA 547
E+ + V W L+++
Sbjct: 711 FVQELGEEGDFVSIWGTLLAS 731
>gi|225460139|ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Vitis vinifera]
Length = 725
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 187/647 (28%), Positives = 309/647 (47%), Gaps = 46/647 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQL 61
+N + S I ++R G +++AL + Y +G TF LL +S + G Q+
Sbjct: 114 KNPHAIFSDIQRFARQGKLKEALTILDYCDQQGIPVNPTTFSSLLRACVESKSLTHGKQI 173
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS---IFGK 118
+ NGL + F+ T L+ +Y G L++ VF+ + KS+ TWN+++ I G+
Sbjct: 174 HVHIRINGLE-NNEFLRTKLVHMYTSCGSLEDARGVFDGVSSKSVYTWNALLRGNVISGR 232
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ E + + E+ V L SF +I + G + H L+IKNG ++
Sbjct: 233 RHYRE-ALSTYSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSIL 291
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR-MSVDI 237
SL++MYF+C I A MF+++ RDVV W +I + +ALE YLR M +
Sbjct: 292 RTSLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALE-YLRWMRREG 350
Query: 238 VFPNQ---TTFVYVINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCDNL 293
+ PN TT + VI + LG+ +HA V+K + VF+ SAL+D Y KC ++
Sbjct: 351 ICPNSVIMTTILPVIGEVGAWK---LGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDM 407
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSS 352
F + +N VSW AL+ GY S I +Q G+RP+ T + VL
Sbjct: 408 ASGRQVFYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVC 467
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ L R G E + Y + K+G + + ++ T+L +
Sbjct: 468 AELRAL-------RQGKEIHSYAV--------KNGFLPN-VSIATSLMV----------- 500
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y++ G + + KL ++ +++SW +I + NG E + +F+ M+ ++ PD+
Sbjct: 501 -MYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQLSKHRPDSV 559
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+LS C +L L LG +HG I K + S FV +I MYGK G+I + F
Sbjct: 560 AMARILSICGELRVLKLGKEIHGQILKKDF-ESIPFVSAEIIKMYGKFGAISKAKLAFKA 618
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ + + WTA+I A G N Q A+ F +M+ GF P+ AVL+ C L +
Sbjct: 619 IPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAVLSICERAELADDA 678
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
+F M+R Y ++ +HY +++LL R G ++A++ I P
Sbjct: 679 CLIFNLMSRRYRIKASNEHYSSIIELLNRVGRTEDAQRFIQMRSASP 725
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 177/384 (46%), Gaps = 23/384 (5%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV------ 56
+R+VV + ++I+ + +AL +M G P +L PV
Sbjct: 317 ERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTIL------PVIGEVGA 370
Query: 57 --EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
G ++ A V+K + F+ +AL+ +Y + G + VF ++ V+W +++S
Sbjct: 371 WKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMS 430
Query: 115 IFGKHGFVEDCM----FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
+ +G ++ + ++ E R +V +T ++ + V L + L G++IH +KN
Sbjct: 431 GYVSNGRLDQALRSIAWMQQEGFRPDV-VTVATVLPVCAEL---RALRQGKEIHSYAVKN 486
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
GF + +A SL+ MY +C + + K+F ++ R+V+SW +I + E+ +A+ ++
Sbjct: 487 GFLPNVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCLHEAVGVF 546
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
M + P+ +++ C L+ LGK IH +++K E FV + ++ Y K
Sbjct: 547 RSMQLSKHRPDSVAMARILSICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGKF 606
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL 349
+ A L F I K ++W A+I Y +I L ++ G+ PN +TF VL
Sbjct: 607 GAISKAKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAVL 666
Query: 350 RSSLAFQLLQLHCLIIRMGYENYE 373
+L CLI + Y
Sbjct: 667 SICERAELADDACLIFNLMSRRYR 690
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 164/502 (32%), Positives = 248/502 (49%), Gaps = 14/502 (2%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS----AEKMFKDVEIRDVVSWNTIIGA 216
++IH +I G + + LV F W +K+ + +V SWN I
Sbjct: 71 KEIHAQMISTGLISDGFALSRLVA--FCAISEWRNLDYCDKILNNAANLNVFSWNMAIRG 128
Query: 217 LAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
ESEN A+ LY M P+ T+ + CAG S I VI+ +
Sbjct: 129 YVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDS 188
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELL 334
D+FV +A++ C L A F E +++VSWN++I GY F L ++
Sbjct: 189 DLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMG 248
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
+L P+E T V+ +S + L +LH I MG + +LM Y K I
Sbjct: 249 ELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIE 308
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
A + V ++ G Y + G V+L +++ D+V WN +I
Sbjct: 309 AAKILFENMTKKTVVSWTTMVIG-YAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAK 367
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
KE L LF M+A+ + PD T V+ LSACS+L L +G +H + K + + + +
Sbjct: 368 RSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNL-TMNVALG 426
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
L+DMY KCG+I ++++F EM RN +TWTA+I L L+G A+ F EM +G
Sbjct: 427 TALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLV 486
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
PD + I VL+AC HGGLV +G + F +M YG+ P++ HY C+VDLL R G L+EAE+
Sbjct: 487 PDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEE 546
Query: 631 IITTMPFPPNALIWRTFLEGCQ 652
+I +MPF P+A++W G +
Sbjct: 547 LIRSMPFEPDAVVWGALFFGSR 568
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 188/382 (49%), Gaps = 36/382 (9%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLLS-CDSLNPVEGA-QL 61
NV S+N I Y +A+ ++ M+ +G P +T+ L C + A ++
Sbjct: 118 NVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEI 177
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V++ G F +D FV A++ + G L +F++ + LV+WNSI++ + + G
Sbjct: 178 LGHVIQLG-FDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGL 236
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ L+ ++ V E + +GV+ + ++L G ++H + + G + + +AN+
Sbjct: 237 ADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANA 296
Query: 182 LVNMYFQCAGI-----------------W--------------SAEKMFKDVEIRDVVSW 210
L++MY +C I W SA ++F ++ +DVV W
Sbjct: 297 LMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLW 356
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
N +IG +++ +AL L+ M V P++ T V +++C+ L +G +H V K
Sbjct: 357 NALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK 416
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFL 329
+ L +V +G+ALVD YAKC N++ A F E+ +N ++W A+I G A P +I
Sbjct: 417 HNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISY 476
Query: 330 LIELLQLGYRPNEFTFSHVLRS 351
E++ +G P+E TF VL +
Sbjct: 477 FSEMISIGLVPDEITFIGVLSA 498
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 140/622 (22%), Positives = 271/622 (43%), Gaps = 66/622 (10%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGL--YGRHGCLDEVVSVFEDMPRK 104
L +C S+ ++ ++ A ++ GL +D F + L+ LD + +
Sbjct: 61 LEACTSMAKMK--EIHAQMISTGLI-SDGFALSRLVAFCAISEWRNLDYCDKILNNAANL 117
Query: 105 SLVTWNSIVSIFGKHGFVE-----DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF 159
++ +WN + G+VE + + L+ ++R A+ ++ ++ + L +
Sbjct: 118 NVFSWNMAI-----RGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSW 172
Query: 160 -GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+I G VI+ GFD +L V N+++++ C + +A K+F + +RD+VSWN+II
Sbjct: 173 TANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYV 232
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+A +LY +M V P++ T + V+++ A L+N LG+ +H + + L V
Sbjct: 233 RCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVP 292
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-----------KSSPTSI 327
+ +AL+D Y KC N+E A + F ++ K +VSW +++GYA P
Sbjct: 293 LANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKD 352
Query: 328 FLLIELLQLGY----RPNE--FTFSHVLRSSLAF-QLLQLHCLII--RMGYENYEYVLGS 378
+L L G+ R E F + SS+A ++ ++CL ++G + +G
Sbjct: 353 VVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALD----VGI 408
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
M Y ++ +A TAL +Y + G + +++ ++ + ++
Sbjct: 409 WMHHYVDKHNLTMNVALGTAL------------VDMYAKCGNIKKAIQVFEEMPGRNSLT 456
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
W +I A +G + F M + + PD TF+ +LSAC + G +
Sbjct: 457 WTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMT 516
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FA 554
IS + L+D+ G+ G + + ++ M + + + W AL ++G
Sbjct: 517 SKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMG 576
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP-----EM 609
+RA K E++ P + +L + E +M GVE +
Sbjct: 577 ERAASKLLELD-----PHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSI 631
Query: 610 DHYHCVVDLLVRYGHLKEAEKI 631
+ V D ++R ++EKI
Sbjct: 632 EMNGLVYDFIIRDKSHPQSEKI 653
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 157/350 (44%), Gaps = 38/350 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEGAQL 61
R++VS+NSII+ Y RCG ++A ++ M P + T G++S + N G +L
Sbjct: 219 RDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKL 278
Query: 62 QASVLKNGL----FCADAFVG--------------------------TALLGLYGRHGCL 91
S+ + GL A+A + T ++ Y + G L
Sbjct: 279 HQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLL 338
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
+ V +F +MP K +V WN+++ F + ++ + LF E+ S VA + + V +
Sbjct: 339 ESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSAC 398
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
S L+ G +H V K+ + + +LV+MY +C I A ++F+++ R+ ++W
Sbjct: 399 SQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWT 458
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC--AGLQNSILGKS-IHAKV 268
II LA A+ + M + P++ TF+ V+++C GL + G+ +
Sbjct: 459 AIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQ--GRDYFYQMT 516
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGA-HLCFSEISNKNIVSWNALILG 317
K + + S LVD + LE A L S + V W AL G
Sbjct: 517 SKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFG 566
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 108/220 (49%), Gaps = 11/220 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+++VV +N++I + + ++AL +F M P + T LS C L ++ G
Sbjct: 348 MPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVG 407
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V K+ L + +GTAL+ +Y + G + + + VFE+MP ++ +TW +I+
Sbjct: 408 IWMHHYVDKHNL-TMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLAL 466
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVI----HGLSNEQDLEFGEQIHGLVIKNGFDY 174
HG + F E++ + E +F+GV+ HG +Q ++ Q + K G
Sbjct: 467 HGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQ---MTSKYGISP 523
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTI 213
+L + LV++ + + AE++ + + D V W +
Sbjct: 524 KLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGAL 563
>gi|347954464|gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
Length = 829
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 182/701 (25%), Positives = 329/701 (46%), Gaps = 61/701 (8%)
Query: 7 VSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQAS 64
+S+ +S+ + G + +AL + M +R +G +L + G Q+ A
Sbjct: 31 ISYFHRVSSLCKKGEIREALGLVTEMGSRNVRIGPEIYGEILQGCVYERDLSTGQQIHAR 90
Query: 65 VLKNGLFCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+LKNG F A + ++ T L+ Y + L+ +F + +++ +W +I+ + + G VE
Sbjct: 91 ILKNGDFYAKNEYIETKLVIFYAKCDALEVAQLLFSKLRARNVFSWAAIIGVRCRIGLVE 150
Query: 124 DCMFLFCELVRSEVALTESSFV--GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ F E++ E L +FV V Q FG +HG V K G + VA+S
Sbjct: 151 GALMGFVEML--ENGLFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASS 208
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L +MY +C + A K+F ++ R VV+WN ++ ++ +A+ L M + + P
Sbjct: 209 LADMYGKCGLLDDARKVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLSAMRNEGIEPT 268
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ T +++ A + GK HA I N LE D +G+++++FY K +E A + F
Sbjct: 269 RVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFD 328
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
+ K++V+WN LI GY + + +L++ G F V SSL + H
Sbjct: 329 RMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRRG----NLNFDCVTLSSLMSAAARTH 384
Query: 362 ---------CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
C IR G+ + + + + YAK G I DA + + + ++ N +
Sbjct: 385 NLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNS-TVEKDLILWNTLL 443
Query: 413 GIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
Y G E ++L +++ P++++WN VI + NG E ++F M+++ I
Sbjct: 444 AAYAEPGLSGEALRLFYEMQLEGVPPNVITWNSVILSLLRNGQVNEAKDMFLQMQSSGIS 503
Query: 469 PDNYTFVSL-----------------------------------LSACSKLCNLALGSSL 493
P+ ++ ++ LSAC+ L +L G S+
Sbjct: 504 PNLISWTTMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANLASLHFGRSI 563
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
HG I + + SS + L+DMY KCG I + ++F + + A+ISA L G
Sbjct: 564 HGYIIRNQHHSSSVSIETSLVDMYAKCGDISKAERVFGSKLYSELPLYNAMISAYALYGN 623
Query: 554 AQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY 612
+ A +R + E +G +PD + + VL+AC H G + + + +F M + ++P ++HY
Sbjct: 624 VKEATALYRSLDEDVGIEPDNITITNVLSACHHAGDINQAIHIFTDMVSKHAMKPCLEHY 683
Query: 613 HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+VDLL G ++A ++I MP+ P+A + ++ L C +
Sbjct: 684 GLMVDLLASAGETEKALRLIEEMPYKPDARMIQSLLASCNK 724
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 160/624 (25%), Positives = 275/624 (44%), Gaps = 124/624 (19%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVE-G 58
+PDR VV++N+++ Y + G ++A+R+ M N G EPT+ T LS + + +E G
Sbjct: 229 IPDRTVVAWNALMVGYVQNGMNQEAIRLLSAMRNEGIEPTRVTVSTCLSASANMGGIEEG 288
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q A + NGL D +GT++L Y + G ++ +F+ M K +VTWN ++S + +
Sbjct: 289 KQSHAIAIVNGLEL-DNILGTSILNFYCKVGLIEYAEMIFDRMIEKDVVTWNLLISGYVQ 347
Query: 119 HGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G VED + + C+L+ R + + ++ + +L+ G+++ I++GF +++
Sbjct: 348 QGLVEDAIHM-CQLMRRGNLNFDCVTLSSLMSAAARTHNLKLGKEVQCYCIRHGFVSDIV 406
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+A++ V MY +C I A+K+F +D++ WNT++ A AE G+AL L+ M ++
Sbjct: 407 LASTAVEMYAKCGSIVDAKKVFNSTVEKDLILWNTLLAAYAEPGLSGEALRLFYEMQLEG 466
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN T+ VI S L+N G+ AK D+F+
Sbjct: 467 VPPNVITWNSVILSL--LRN---GQVNEAK--------DMFL-----------------Q 496
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
+ S IS N++SW ++ G S +I L ++ + G R N F+ + L +
Sbjct: 497 MQSSGIS-PNLISWTTMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANLA 555
Query: 357 LLQ----LHCLIIRMGYENYEYVL-GSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L +H IIR + + + SL+ YAK G IS A +
Sbjct: 556 SLHFGRSIHGYIIRNQHHSSSVSIETSLVDMYAKCGDISKAERVFGS------------- 602
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPD 470
KL S+L +N +I+A A G+ KE L++ + I PD
Sbjct: 603 --------------KLYSELPL-----YNAMISAYALYGNVKEATALYRSLDEDVGIEPD 643
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
N T ++LSAC G I ++ IF
Sbjct: 644 NITITNVLSACH------------------------------------HAGDINQAIHIF 667
Query: 531 NEMTDRNVIT-----WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+M ++ + + ++ L G ++AL EM +KPD + ++L +C
Sbjct: 668 TDMVSKHAMKPCLEHYGLMVDLLASAGETEKALRLIEEMP---YKPDARMIQSLLASCNK 724
Query: 586 GGLVREGMELFERMNRS-YGVEPE 608
+ EL E ++R EPE
Sbjct: 725 ----QHKSELVEYLSRHLLESEPE 744
>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g32430, mitochondrial; Flags: Precursor
gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 173/602 (28%), Positives = 297/602 (49%), Gaps = 49/602 (8%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ +G F + V A++G+Y + G D + +FE++ +V+WN+I+S F
Sbjct: 95 GCQIHGFSTTSG-FTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFD 153
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + + + + V ++ + + G Q+ V+K G + +L+
Sbjct: 154 DN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLV 210
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG-KALELYLRMSVD 236
V NS + MY + A ++F ++ +D++SWN+++ L++ FG +A+ ++ M +
Sbjct: 211 VGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMRE 270
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V + +F VI +C + L + IH IK E + VG+ L+ Y+KC LE
Sbjct: 271 GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAV 330
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS----S 352
F ++S +N+VSW +I ++K SIFL + G PNE TF ++ +
Sbjct: 331 KSVFHQMSERNVVSWTTMI--SSNKDDAVSIFLNMRF--DGVYPNEVTFVGLINAVKCNE 386
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ L++H L I+ G+ + V S +T YAK + DA
Sbjct: 387 QIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDA-------------------- 426
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K + +I+SWN +I+ A NG E L++F AA P+ Y
Sbjct: 427 ------------KKAFEDITFREIISWNAMISGFAQNGFSHEALKMF-LSAAAETMPNEY 473
Query: 473 TFVSLLSACSKLCNLAL--GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF S+L+A + ++++ G H + K ++S V + L+DMY K G+I S K+F
Sbjct: 474 TFGSVLNAIAFAEDISVKQGQRCHAHLLKLG-LNSCPVVSSALLDMYAKRGNIDESEKVF 532
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
NEM+ +N WT++ISA +G + + F +M PD V ++VLTAC G+V
Sbjct: 533 NEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVD 592
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+G E+F M Y +EP +HY C+VD+L R G LKEAE++++ +P P + ++ L
Sbjct: 593 KGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGS 652
Query: 651 CQ 652
C+
Sbjct: 653 CR 654
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 158/543 (29%), Positives = 270/543 (49%), Gaps = 56/543 (10%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQ 60
D +VVS+N+I+S + + AL + M + G FT+ LS S + G Q
Sbjct: 139 DPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQ 195
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
LQ++V+K GL +D VG + + +Y R G VF++M K +++WNS++S + G
Sbjct: 196 LQSTVVKTGLE-SDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG 254
Query: 121 -FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
F + + +F +++R V L SF VI +E DL+ QIHGL IK G++ L V
Sbjct: 255 TFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 314
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L++ Y +C + + + +F + R+VVSW T+I S N A+ ++L M D V+
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVY 369
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN+ TFV +IN+ + G IH IK + VG++ + YAK + LE A
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 429
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF---- 355
F +I+ + I+SWNA+I G+A + PNE+TF VL +++AF
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVL-NAIAFAEDI 488
Query: 356 ---QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
Q + H ++++G + V +L+ YAK G I ++
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDES-------------------E 529
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
++N Q N+ V W +I+A + +GD++ V+ LF M + PD
Sbjct: 530 KVFNEMSQKNQFV-------------WTSIISAYSSHGDFETVMNLFHKMIKENVAPDLV 576
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF+S+L+AC++ + G + ++ + + S + + C ++DM G+ G + + ++
Sbjct: 577 TFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSC--MVDMLGRAGRLKEAEELM 634
Query: 531 NEM 533
+E+
Sbjct: 635 SEV 637
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 240/502 (47%), Gaps = 54/502 (10%)
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
DL+ G QIHG +GF + V+N+++ MY + +A +F+++ DVVSWNTI+
Sbjct: 91 DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILS 150
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+++ AL +RM V + T+ ++ C G + +LG + + V+K LE
Sbjct: 151 GFDDNQ---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLES 207
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS--PTSIFLLIEL 333
D+ VG++ + Y++ + GA F E+S K+++SWN+L+ G + + + ++ + ++
Sbjct: 208 DLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDM 267
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
++ G + +F+ V+ + L Q+H L I+ GYE+ V LM+ Y+K G++
Sbjct: 268 MREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVL 327
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK-LLSQLERPDIVSWNIVIAACAH 448
E VK + Q+ ++VSW +I++
Sbjct: 328 ---------------------------------EAVKSVFHQMSERNVVSWTTMISS--- 351
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
N D + + +F MR +YP+ TFV L++A + G +HGL KT +S +
Sbjct: 352 NKD--DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS- 408
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V N I +Y K ++ + K F ++T R +I+W A+IS NGF+ AL+ F
Sbjct: 409 VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAET 468
Query: 569 FKPDRVALIAVLTACRHGG--LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
P+ +VL A V++G + + G+ ++D+ + G++
Sbjct: 469 M-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK-LGLNSCPVVSSALLDMYAKRGNID 526
Query: 627 EAEKIITTMPFPPNALIWRTFL 648
E+EK+ M N +W + +
Sbjct: 527 ESEKVFNEMS-QKNQFVWTSII 547
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 191/355 (53%), Gaps = 13/355 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCG-YVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVE 57
M ++++S+NS++S S+ G + +A+ +F M+ G E +F +++ C +
Sbjct: 235 MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKL 294
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ +K G + + VG L+ Y + G L+ V SVF M +++V+W +++S
Sbjct: 295 ARQIHGLCIKRG-YESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS--- 350
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+D + +F + V E +FVG+I+ + + ++ G +IHGL IK GF E
Sbjct: 351 --SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS 408
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V NS + +Y + + A+K F+D+ R+++SWN +I A++ +AL+++L + +
Sbjct: 409 VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAET 468
Query: 238 VFPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ PN+ TF V+N+ A ++ + G+ HA ++K L V SAL+D YAK N++
Sbjct: 469 M-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDE 527
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL 349
+ F+E+S KN W ++I Y+S T + L ++++ P+ TF VL
Sbjct: 528 SEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVL 582
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 141/256 (55%), Gaps = 11/256 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
M +RNVVS+ ++IS+ +DA+ +FL M G P + TF GL++ N EG
Sbjct: 337 MSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 391
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ +K G F ++ VG + + LY + L++ FED+ + +++WN+++S F +
Sbjct: 392 LKIHGLCIKTG-FVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQ 450
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF--GEQIHGLVIKNGFDYEL 176
+GF + + +F +E E +F V++ ++ +D+ G++ H ++K G +
Sbjct: 451 NGFSHEALKMFLSAA-AETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCP 509
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+V+++L++MY + I +EK+F ++ ++ W +II A + +F + L+ +M +
Sbjct: 510 VVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKE 569
Query: 237 IVFPNQTTFVYVINSC 252
V P+ TF+ V+ +C
Sbjct: 570 NVAPDLVTFLSVLTAC 585
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 194/414 (46%), Gaps = 47/414 (11%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
++ T + +C G + G IH + V V +A++ Y K + A F
Sbjct: 77 DEVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 134
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
+ + ++VSWN ++ G+ + ++ ++ + G + FT+S ++L+F
Sbjct: 135 ENLVDPDVVSWNTILSGF--DDNQIALNFVVRMKSAGVVFDAFTYS----TALSF----- 183
Query: 361 HCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
C+ G E + +LG L ++ K+GL SD +V N +Y+R+G
Sbjct: 184 -CV----GSEGF--LLGLQLQSTVVKTGLESD-------------LVVGNSFITMYSRSG 223
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK-EVLELFKYMRAARIYPDNYTFVSLL 478
+ ++ ++ D++SWN +++ + G + E + +F+ M + D+ +F S++
Sbjct: 224 SFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVI 283
Query: 479 SACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
+ C +L L +HGL IK+ S V N+L+ Y KCG + + +F++M++RN
Sbjct: 284 TTCCHETDLKLARQIHGLCIKRG--YESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERN 341
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
V++WT +IS+ A+ F M F G P+ V + ++ A + ++EG+++
Sbjct: 342 VVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHG 396
Query: 598 R-MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + EP + + + L ++ L++A+K + F + W + G
Sbjct: 397 LCIKTGFVSEPSVG--NSFITLYAKFEALEDAKKAFEDITFRE-IISWNAMISG 447
>gi|297810965|ref|XP_002873366.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319203|gb|EFH49625.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 832
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 186/677 (27%), Positives = 332/677 (49%), Gaps = 55/677 (8%)
Query: 1 MPDRNVVSFNSIISAYS-RCGYVEDALRMFLYM-INRGFEPTQFTFGGLLSC-----DSL 53
M + V +N +++ S CG + +R F M +P+ TF LL DS
Sbjct: 82 MDSVDPVVWNIVLTGLSVSCG--RETMRFFKAMHFADEPKPSSVTFAILLPVCVRLGDSY 139
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHG-CLDEVVSVFEDMPRKSLVTWNSI 112
N G + + ++K GL D VG AL+ +Y + G + + + F+D+ K +V+WN+I
Sbjct: 140 N---GKSMHSYIIKTGLE-KDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVSWNAI 195
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI---HGLSNEQDLEFGEQIHGLVIK 169
++ F ++ + D FC +++ ++ V+ + G QIH V++
Sbjct: 196 IAGFSENKMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMGKNIAYRSGRQIHSYVVQ 255
Query: 170 NGF-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
+ + V NSLV+ Y + I A +F + +D+VSWN +I A + + KAL+
Sbjct: 256 RSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNHEWLKALQ 315
Query: 229 LY--LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVD 285
L+ L D+ + T + ++ CA L + GK IH+ +++++ L D VG+AL+
Sbjct: 316 LFHNLVQKGDVSL-DPVTILSILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNALIS 374
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTF 345
FYA+ + A+ FS +S K+I+SWNA++ +A SP F + LL +
Sbjct: 375 FYARFGDTSAAYWAFSLMSMKDIISWNAILDAFAD--SPKQ-FQFLNLLHHLFNEAITLD 431
Query: 346 SHVLRSSLAF--------QLLQLHCLIIRMG--YENYEYVLG-SLMTSYAKSGLISDALA 394
S + S L F ++ ++H ++ G + E LG +L+ +YAK G + A
Sbjct: 432 SVTILSLLKFCTNVQGIGKVKEVHGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHK 491
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
L+ R +V N + Y +G +++ L S++ D+ +W++++ A + E
Sbjct: 492 IFQGLSERRTLVTYNSLLSGYVNSGSHDDAQMLFSEMSTTDLTTWSLMVRIYAESCFPNE 551
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
+ +F+ ++A + P+ T ++LL C++L +L L HG I + + D + L+
Sbjct: 552 AIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGRL--GDIRLKGTLL 609
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
D+Y KCGS+ + +F R+++ +TA+++ ++G + AL F M KPD
Sbjct: 610 DVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIFSHMIDSNIKPDH- 668
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
+G+++++ + +G++P M+ Y C VDLL R G L +A IT
Sbjct: 669 ----------------DGLQIYDSIRAVHGMKPTMEQYACAVDLLARGGRLDDAYSFITQ 712
Query: 635 MPFPPNALIWRTFLEGC 651
MP PNA IW T L C
Sbjct: 713 MPVEPNANIWGTLLRAC 729
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 239/526 (45%), Gaps = 57/526 (10%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
F+ V+ ++ +L G +HG V K G V+ S++NMY +C + +KMF+ ++
Sbjct: 24 FLDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDCQKMFRQMD 83
Query: 204 IRDVVSWNTIIGALA-----ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
D V WN ++ L+ E+ F KA+ D P+ TF ++ C L +S
Sbjct: 84 SVDPVVWNIVLTGLSVSCGRETMRFFKAMHF-----ADEPKPSSVTFAILLPVCVRLGDS 138
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN-LEGAHLCFSEISNKNIVSWNALILG 317
GKS+H+ +IK LE D VG+ALV YAK + A F +I++K++VSWNA+I G
Sbjct: 139 YNGKSMHSYIIKTGLEKDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVSWNAIIAG 198
Query: 318 YASKSSPTSIFL-LIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
++ F +L+ PN T ++VL + MG +N Y
Sbjct: 199 FSENKMMADAFRSFCLMLKEPTEPNYATIANVLP------------VCASMG-KNIAYRS 245
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
G + SY FV N + Y R G+ E L +++ D+
Sbjct: 246 GRQIHSYVVQRSWLQTHVFV-----------CNSLVSFYLRVGRIEEAASLFTRMGSKDL 294
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
VSWN+VIA A N ++ + L+LF + + + D T +S+L C++L +L G +H
Sbjct: 295 VSWNVVIAGYASNHEWLKALQLFHNLVQKGDVSLDPVTILSILPVCAQLTDLTCGKEIHS 354
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
I + + DT V N LI Y + G ++ F+ M+ +++I+W A++ A +
Sbjct: 355 YILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSMKDIISWNAILDAFADSPKQF 414
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACR-----------HGGLVREGMELFERMNRSYG 604
+ L + D V ++++L C HG V+ G+ E
Sbjct: 415 QFLNLLHHLFNEAITLDSVTILSLLKFCTNVQGIGKVKEVHGYSVKAGLLHNEE------ 468
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
EP++ + ++D + G+++ A KI + + + + L G
Sbjct: 469 -EPKLG--NALLDAYAKCGNVEYAHKIFQGLSERRTLVTYNSLLSG 511
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 4/157 (2%)
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D+ F+ ++ AC+ + L G +LHG + K I+ T V +++MY KC + K+
Sbjct: 20 DHRVFLDVVKACASVSELTSGRALHGCVFKLGHIAC-TEVSKSVLNMYAKCRRMDDCQKM 78
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG-FKPDRVALIAVLTACRHGGL 588
F +M + + W +++ L ++ + + F+ M F KP V +L C G
Sbjct: 79 FRQMDSVDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFAILLPVCVRLGD 137
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G + + ++ G+E + + +V + ++G++
Sbjct: 138 SYNGKSMHSYIIKT-GLEKDTLVGNALVSMYAKFGYI 173
>gi|255575102|ref|XP_002528456.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532132|gb|EEF33939.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 664
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 173/614 (28%), Positives = 309/614 (50%), Gaps = 42/614 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVEGA 59
MP R+VV++N++I S ++AL++ M G EP T L+ S L ++
Sbjct: 75 MPKRDVVTWNAMIFGLSHSVAPQEALKLVKSMQLAGQEPDFVTIVNLVPAVSRLADIDAC 134
Query: 60 Q-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ L V++ G A L+ +Y + G + VFE M + ++W ++++ +
Sbjct: 135 RSLHGYVIRRGF---PAVFSNGLIDMYSKCGDIYVACQVFELMQHTNDISWRTMMAGYAH 191
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + + LF + ++ L + S + ++ +D G++I + G D ++ +
Sbjct: 192 NECFFEVLDLFDYMKKNNFRLNKVSVASALLAAADVRDSGRGKEICEFARQQGIDSDVSI 251
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+++ MY +C + A+++F+ ++++D+V+W+ II AL +S AL L+ M D +
Sbjct: 252 TTAMMTMYAKCGNLDKAKQLFQGLKVKDLVAWSAIIDALVQSRYAEDALSLFRDMQNDFL 311
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N T + V+ +CA L + LGKS+H IK + D+ +G++LV YAKC A
Sbjct: 312 KANNVTLLSVLPACADLMSLRLGKSVHCYAIKADFDSDILIGTSLVSMYAKCGLFNSALT 371
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQL 357
F+ + ++IV+ NALI Y+ P + ++Q+ P+ T +L +
Sbjct: 372 VFNRMPCEDIVTCNALINEYSQIGDPYHAMEVFHVVQISEILPDSRTMVCLLSVCILLHD 431
Query: 358 LQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L+ +H LII+ G++++ V SL+ YAK G +++A
Sbjct: 432 LEQGSCIHGLIIKFGFDSHCNVKNSLIDMYAKCGSLANA-------------------EF 472
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++ RT E K D VSWN +IA HN KE LF M+ P+ T
Sbjct: 473 LFKRT----EFTK--------DEVSWNALIAGYVHNEHAKEAFSLFCQMKLEHFQPNLVT 520
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FVS+ A ++L L G +LH I + S+ V N LIDMY KCG + +S +F+EM
Sbjct: 521 FVSVFPAVARLSALKEGMALHACIMRMGF-QSNVLVGNCLIDMYAKCGQLHNSEHLFHEM 579
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++N ++W +++ ++G A+E F M+ + D ++ ++VL+ACRH GL+ EG
Sbjct: 580 KNKNAVSWNVMLAGYAVHGQGYHAIELFSLMQKSHIQADSLSFLSVLSACRHSGLIDEGR 639
Query: 594 ELFERMNRSYGVEP 607
++F+ M + + +EP
Sbjct: 640 KIFDSMYKEHQLEP 653
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 182/635 (28%), Positives = 314/635 (49%), Gaps = 54/635 (8%)
Query: 28 MFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLY 85
M+ ++N+G EP + TF +L L EG + ++ GL +D FVGTAL+ +Y
Sbjct: 1 MYHSILNKGLEPDKCTFTFVLKACTGGLEFKEGILIHRGIVFKGLE-SDVFVGTALVNMY 59
Query: 86 GRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS-EVALTESSF 144
+ G VF+ MP++ +VTWN++ IFG V L +LV+S ++A E F
Sbjct: 60 SKMGDPQLAKGVFDKMPKRDVVTWNAM--IFGLSHSVAPQEAL--KLVKSMQLAGQEPDF 115
Query: 145 VGVIH---GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKD 201
V +++ +S D++ +HG VI+ GF + +N L++MY +C I+ A ++F+
Sbjct: 116 VTIVNLVPAVSRLADIDACRSLHGYVIRRGF--PAVFSNGLIDMYSKCGDIYVACQVFEL 173
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILG 261
++ + +SW T++ A +E F + L+L+ M + N+ + + + A +++S G
Sbjct: 174 MQHTNDISWRTMMAGYAHNECFFEVLDLFDYMKKNNFRLNKVSVASALLAAADVRDSGRG 233
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-S 320
K I + ++ DV + +A++ YAKC NL+ A F + K++V+W+A+I S
Sbjct: 234 KEICEFARQQGIDSDVSITTAMMTMYAKCGNLDKAKQLFQGLKVKDLVAWSAIIDALVQS 293
Query: 321 KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVL 376
+ + ++ L ++ + N T VL + L+L HC I+ +++ +
Sbjct: 294 RYAEDALSLFRDMQNDFLKANNVTLLSVLPACADLMSLRLGKSVHCYAIKADFDSDILIG 353
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
SL++ YAK GL + AL ++NR + DI
Sbjct: 354 TSLVSMYAKCGLFNSALT-------------------VFNR-------------MPCEDI 381
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
V+ N +I + GD +E+F ++ + I PD+ T V LLS C L +L GS +HGL
Sbjct: 382 VTCNALINEYSQIGDPYHAMEVFHVVQISEILPDSRTMVCLLSVCILLHDLEQGSCIHGL 441
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQ 555
I K S V N LIDMY KCGS+ ++ +F ++ ++W ALI+ N A+
Sbjct: 442 IIKFG-FDSHCNVKNSLIDMYAKCGSLANAEFLFKRTEFTKDEVSWNALIAGYVHNEHAK 500
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
A F +M+ F+P+ V ++V A ++EGM L + R G + + +C+
Sbjct: 501 EAFSLFCQMKLEHFQPNLVTFVSVFPAVARLSALKEGMALHACIMR-MGFQSNVLVGNCL 559
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+D+ + G L +E + M NA+ W L G
Sbjct: 560 IDMYAKCGQLHNSEHLFHEMK-NKNAVSWNVMLAG 593
>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
Length = 688
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 173/602 (28%), Positives = 297/602 (49%), Gaps = 49/602 (8%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ +G F + V A++G+Y + G D + +FE++ +V+WN+I+S F
Sbjct: 20 GCQIHGFSTTSG-FTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFD 78
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + + + + V ++ + + G Q+ V+K G + +L+
Sbjct: 79 DN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLV 135
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG-KALELYLRMSVD 236
V NS + MY + A ++F ++ +D++SWN+++ L++ FG +A+ ++ M +
Sbjct: 136 VGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMRE 195
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V + +F VI +C + L + IH IK E + VG+ L+ Y+KC LE
Sbjct: 196 GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAV 255
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS----S 352
F ++S +N+VSW +I ++K SIFL + G PNE TF ++ +
Sbjct: 256 KSVFHQMSERNVVSWTTMI--SSNKDDAVSIFLNMRF--DGVYPNEVTFVGLINAVKCNE 311
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ L++H L I+ G+ + V S +T YAK + DA
Sbjct: 312 QIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDA-------------------- 351
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K + +I+SWN +I+ A NG E L++F AA P+ Y
Sbjct: 352 ------------KKAFEDITFREIISWNAMISGFAQNGFSHEALKMF-LSAAAETMPNEY 398
Query: 473 TFVSLLSACSKLCNLAL--GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF S+L+A + ++++ G H + K ++S V + L+DMY K G+I S K+F
Sbjct: 399 TFGSVLNAIAFAEDISVKQGQRCHAHLLKLG-LNSCPVVSSALLDMYAKRGNIDESEKVF 457
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
NEM+ +N WT++ISA +G + + F +M PD V ++VLTAC G+V
Sbjct: 458 NEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVD 517
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+G E+F M Y +EP +HY C+VD+L R G LKEAE++++ +P P + ++ L
Sbjct: 518 KGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGS 577
Query: 651 CQ 652
C+
Sbjct: 578 CR 579
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 158/543 (29%), Positives = 270/543 (49%), Gaps = 56/543 (10%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQ 60
D +VVS+N+I+S + + AL + M + G FT+ LS S + G Q
Sbjct: 64 DPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQ 120
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
LQ++V+K GL +D VG + + +Y R G VF++M K +++WNS++S + G
Sbjct: 121 LQSTVVKTGLE-SDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG 179
Query: 121 -FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
F + + +F +++R V L SF VI +E DL+ QIHGL IK G++ L V
Sbjct: 180 TFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 239
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L++ Y +C + + + +F + R+VVSW T+I S N A+ ++L M D V+
Sbjct: 240 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVY 294
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN+ TFV +IN+ + G IH IK + VG++ + YAK + LE A
Sbjct: 295 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 354
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF---- 355
F +I+ + I+SWNA+I G+A + PNE+TF VL +++AF
Sbjct: 355 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVL-NAIAFAEDI 413
Query: 356 ---QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
Q + H ++++G + V +L+ YAK G I ++
Sbjct: 414 SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDES-------------------E 454
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
++N Q N+ V W +I+A + +GD++ V+ LF M + PD
Sbjct: 455 KVFNEMSQKNQFV-------------WTSIISAYSSHGDFETVMNLFHKMIKENVAPDLV 501
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF+S+L+AC++ + G + ++ + + S + + C ++DM G+ G + + ++
Sbjct: 502 TFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSC--MVDMLGRAGRLKEAEELM 559
Query: 531 NEM 533
+E+
Sbjct: 560 SEV 562
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 240/502 (47%), Gaps = 54/502 (10%)
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
DL+ G QIHG +GF + V+N+++ MY + +A +F+++ DVVSWNTI+
Sbjct: 16 DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILS 75
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+++ AL +RM V + T+ ++ C G + +LG + + V+K LE
Sbjct: 76 GFDDNQ---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLES 132
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS--PTSIFLLIEL 333
D+ VG++ + Y++ + GA F E+S K+++SWN+L+ G + + + ++ + ++
Sbjct: 133 DLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDM 192
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
++ G + +F+ V+ + L Q+H L I+ GYE+ V LM+ Y+K G++
Sbjct: 193 MREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVL 252
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK-LLSQLERPDIVSWNIVIAACAH 448
E VK + Q+ ++VSW +I++
Sbjct: 253 ---------------------------------EAVKSVFHQMSERNVVSWTTMISS--- 276
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
N D + + +F MR +YP+ TFV L++A + G +HGL KT +S +
Sbjct: 277 NKD--DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS- 333
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V N I +Y K ++ + K F ++T R +I+W A+IS NGF+ AL+ F
Sbjct: 334 VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAET 393
Query: 569 FKPDRVALIAVLTACRHGG--LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
P+ +VL A V++G + + G+ ++D+ + G++
Sbjct: 394 M-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK-LGLNSCPVVSSALLDMYAKRGNID 451
Query: 627 EAEKIITTMPFPPNALIWRTFL 648
E+EK+ M N +W + +
Sbjct: 452 ESEKVFNEMS-QKNQFVWTSII 472
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 191/355 (53%), Gaps = 13/355 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCG-YVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVE 57
M ++++S+NS++S S+ G + +A+ +F M+ G E +F +++ C +
Sbjct: 160 MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKL 219
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ +K G + + VG L+ Y + G L+ V SVF M +++V+W +++S
Sbjct: 220 ARQIHGLCIKRG-YESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS--- 275
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+D + +F + V E +FVG+I+ + + ++ G +IHGL IK GF E
Sbjct: 276 --SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS 333
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V NS + +Y + + A+K F+D+ R+++SWN +I A++ +AL+++L + +
Sbjct: 334 VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAET 393
Query: 238 VFPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ PN+ TF V+N+ A ++ + G+ HA ++K L V SAL+D YAK N++
Sbjct: 394 M-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDE 452
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL 349
+ F+E+S KN W ++I Y+S T + L ++++ P+ TF VL
Sbjct: 453 SEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVL 507
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 141/256 (55%), Gaps = 11/256 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
M +RNVVS+ ++IS+ +DA+ +FL M G P + TF GL++ N EG
Sbjct: 262 MSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 316
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ +K G F ++ VG + + LY + L++ FED+ + +++WN+++S F +
Sbjct: 317 LKIHGLCIKTG-FVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQ 375
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF--GEQIHGLVIKNGFDYEL 176
+GF + + +F +E E +F V++ ++ +D+ G++ H ++K G +
Sbjct: 376 NGFSHEALKMFLSAA-AETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCP 434
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+V+++L++MY + I +EK+F ++ ++ W +II A + +F + L+ +M +
Sbjct: 435 VVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKE 494
Query: 237 IVFPNQTTFVYVINSC 252
V P+ TF+ V+ +C
Sbjct: 495 NVAPDLVTFLSVLTAC 510
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 194/414 (46%), Gaps = 47/414 (11%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
++ T + +C G + G IH + V V +A++ Y K + A F
Sbjct: 2 DEVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 59
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
+ + ++VSWN ++ G+ + ++ ++ + G + FT+S ++L+F
Sbjct: 60 ENLVDPDVVSWNTILSGF--DDNQIALNFVVRMKSAGVVFDAFTYS----TALSF----- 108
Query: 361 HCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
C+ G E + +LG L ++ K+GL SD +V N +Y+R+G
Sbjct: 109 -CV----GSEGF--LLGLQLQSTVVKTGLESD-------------LVVGNSFITMYSRSG 148
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK-EVLELFKYMRAARIYPDNYTFVSLL 478
+ ++ ++ D++SWN +++ + G + E + +F+ M + D+ +F S++
Sbjct: 149 SFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVI 208
Query: 479 SACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
+ C +L L +HGL IK+ S V N+L+ Y KCG + + +F++M++RN
Sbjct: 209 TTCCHETDLKLARQIHGLCIKRG--YESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERN 266
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
V++WT +IS+ A+ F M F G P+ V + ++ A + ++EG+++
Sbjct: 267 VVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHG 321
Query: 598 R-MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + EP + + + L ++ L++A+K + F + W + G
Sbjct: 322 LCIKTGFVSEPSVG--NSFITLYAKFEALEDAKKAFEDITFRE-IISWNAMISG 372
>gi|326490736|dbj|BAJ90035.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511421|dbj|BAJ87724.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 801
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 185/666 (27%), Positives = 327/666 (49%), Gaps = 59/666 (8%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPT----QFTFG-GLLSC-DSLNPVEGAQLQA 63
N ++ AY + ALR++ ++N P +T+ L +C S G + A
Sbjct: 66 NVLLIAYVAGALPDHALRLYA-LLNHAARPAPRSDHYTYSCALTACARSRRLRLGRSVHA 124
Query: 64 SVLKNGLFCAD-AFVGTALLGLYG-----RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+L+ D A + +LL LY R G +D V +F+ MP+K++V+WN++ +
Sbjct: 125 HLLRRARSLPDTAVLRNSLLNLYASCARHRRGGVDVVRRLFDAMPKKNVVSWNTLFGWYV 184
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY--E 175
K G ++ + +F ++ V T SFV V + D + ++GL+IK+G +Y +
Sbjct: 185 KTGRPDEALEMFARMLEDGVRPTPVSFVNVFPA-AGSGDPSWPFLLYGLLIKHGVEYVND 243
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L V +S + M+ + + + SA +F +++ WNT+I ++ F +A++L++++
Sbjct: 244 LFVVSSAIGMFSEISDVQSARMVFDRAGKKNIEVWNTMITGYVQNGQFSQAMDLFIQILG 303
Query: 236 DIVFPNQT-TFVYVINSCAGLQNSILGKSIHAKVIKNALEC-DVFVGSALVDFYAKCDNL 293
P+ TF+ + + + Q+ LG+ +H ++K V +G+ALV Y++C N+
Sbjct: 304 SKEVPSDVVTFLSAVTAASQSQDVRLGQQLHGYLMKGMHSTLPVILGNALVVMYSRCGNV 363
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSS 352
+ A F + K+IVSWN +I + LL+ ++ + G+ P+ T + VL ++
Sbjct: 364 QTAFELFDRLPEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFIPDTVTLTAVLSAA 423
Query: 353 LAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
LQ+ H +IR G E E + L+ Y+KSG I A
Sbjct: 424 SNTGDLQIGKQSHGYLIRHGIEG-EGLESYLIDMYSKSGRIDMA---------------Q 467
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+ G N D V+WN +IA +G ++ + F+ M A +
Sbjct: 468 RVFDGYGNDR----------------DEVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVE 511
Query: 469 PDNYTFVSLLSACSKLCN-LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P + T S+L AC + + G +H + + ++ FV L+DMY KCG I ++
Sbjct: 512 PTSVTLASVLPACDPVGGGVCAGKQIHSFALRHSL-DTNVFVGTALVDMYSKCGEISAAE 570
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+F MT+++ +T+T +IS LG +GF +RAL F M G KPD V +A ++AC + G
Sbjct: 571 NVFGGMTEKSTVTYTTMISGLGQHGFGERALSLFYSMRDKGLKPDAVTFLAAISACNYSG 630
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL-IWRT 646
LV EG+ L+ M ++G+ H+ C+VDLL + G + EA + ++ N + IW +
Sbjct: 631 LVDEGLSLYRSME-TFGLAATPQHHCCIVDLLAKAGRVDEAYDFVESLGEDGNFIAIWGS 689
Query: 647 FLEGCQ 652
L C+
Sbjct: 690 LLASCK 695
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 143/581 (24%), Positives = 272/581 (46%), Gaps = 50/581 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP +NVVS+N++ Y + G ++AL MF M+ G PT +F + + S +P
Sbjct: 168 MPKKNVVSWNTLFGWYVKTGRPDEALEMFARMLEDGVRPTPVSFVNVFPAAGSGDPSWPF 227
Query: 60 QLQASVLKNGL-FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L ++K+G+ + D FV ++ +G++ + VF+ +K++ WN++++ + +
Sbjct: 228 LLYGLLIKHGVEYVNDLFVVSSAIGMFSEISDVQSARMVFDRAGKKNIEVWNTMITGYVQ 287
Query: 119 HGFVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD-YEL 176
+G M LF +++ S EV +F+ + S QD+ G+Q+HG ++K +
Sbjct: 288 NGQFSQAMDLFIQILGSKEVPSDVVTFLSAVTAASQSQDVRLGQQLHGYLMKGMHSTLPV 347
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++ N+LV MY +C + +A ++F + +D+VSWNT+I A +++ + L L +M
Sbjct: 348 ILGNALVVMYSRCGNVQTAFELFDRLPEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQKS 407
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
P+ T V+++ + + +GK H +I++ +E + + S L+D Y+K ++ A
Sbjct: 408 GFIPDTVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGE-GLESYLIDMYSKSGRIDMA 466
Query: 297 HLCFSEISN-KNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLA 354
F N ++ V+WNA+I GY P L +++ G P T + VL +
Sbjct: 467 QRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVEPTSVTLASVLPACDP 526
Query: 355 F-----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
Q+H +R + +V +L+ Y+K G IS A N
Sbjct: 527 VGGGVCAGKQIHSFALRHSLDTNVFVGTALVDMYSKCGEISAA---------------EN 571
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ G+ ++ V++ +I+ +G + L LF MR + P
Sbjct: 572 VFGGMTEKS-----------------TVTYTTMISGLGQHGFGERALSLFYSMRDKGLKP 614
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D TF++ +SAC+ + G SL+ ++ + ++ C ++D+ K G + +
Sbjct: 615 DAVTFLAAISACNYSGLVDEGLSLYRSMETFGLAATPQHHC-CIVDLLAKAGRVDEAYDF 673
Query: 530 FNEM-TDRNVIT-WTALISALGLNG---FAQRALEKFREME 565
+ D N I W +L+++ G A A EK +E
Sbjct: 674 VESLGEDGNFIAIWGSLLASCKAQGKMELAAWATEKVLNIE 714
>gi|347954460|gb|AEP33730.1| chlororespiratory reduction 21, partial [Capsella bursa-pastoris]
Length = 820
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 169/688 (24%), Positives = 325/688 (47%), Gaps = 48/688 (6%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNG- 69
+S+ + G +++AL + M R +G +L + G Q+ A +LKNG
Sbjct: 31 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGD 90
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
L+ + ++ T L+ Y + L+ +F + +++ +W +I+ + + G E + F
Sbjct: 91 LYARNEYIETKLVIFYAKCDDLEIAEVLFSKLRVRNVFSWAAIIGVKCRMGLCEGALMGF 150
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
E++ +E+ V Q FG +HG V+K G + + VA+SL +MY +C
Sbjct: 151 VEMLENEIFPDNFVVPNVFKACGALQWSRFGRGVHGYVLKAGLEDCVFVASSLADMYGKC 210
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A K+F ++ R+VV+WN ++ ++ +A+ L M D V P + T +
Sbjct: 211 GVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKDGVEPTRVTVSTCL 270
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
++ A + G HA I N LE D +G++L++FY K +E A + F + K++V
Sbjct: 271 SASANMAGVEEGTQCHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRMFEKDVV 330
Query: 310 SWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL----HCLI 364
+WN LI GY + + +L++L + + T + ++ ++ + L+L C
Sbjct: 331 TWNLLISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCXC 390
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
R E+ + + M YAK G I DA + + + ++ N + Y +G E
Sbjct: 391 FRHSLESDIVLASTAMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAAYAESGHSGEA 449
Query: 425 VKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL--- 477
++L +++ P++++WN++I + N + E E+F M+++ I P+ ++ ++
Sbjct: 450 LRLFYEMQLESVPPNVITWNLIILSRLRNAEVNEAKEMFLQMQSSGITPNLISWTTMMNG 509
Query: 478 --------------------------------LSACSKLCNLALGSSLHGLIKKTEIISS 505
LSA + L + G S+HG I + SS
Sbjct: 510 MVQNGCSEEAIHFLRKMQESGMRPNAFSITVALSASANLASXHFGRSIHGYIIRNLRHSS 569
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
+ L+DMY KCG I + ++F + + A+ISA L G A+ +R +E
Sbjct: 570 SASIETSLVDMYAKCGDINKAERVFESKLSNELPLYNAMISAYALXGNVTEAVALYRSLE 629
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
+G KPD + ++L+AC H G + + + +F M ++GV+P ++HY +VDL
Sbjct: 630 DMGXKPDSITFTSLLSACNHAGDIDQAIRVFTDMVSNHGVKPCLEHYGLLVDLFASAKET 689
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQR 653
+A +++ MP+ P+ + ++ + C +
Sbjct: 690 DKALRLMEEMPYKPDXRMIQSLVASCNK 717
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 233/476 (48%), Gaps = 49/476 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEG 58
+P+RNVV++N+++ Y + G E+A+R+ M G EPT+ T LS + EG
Sbjct: 223 IPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKDGVEPTRVTVSTCLSASANMAGVEEG 282
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q A + NGL D +GT+LL Y + G ++ +F+ M K +VTWN ++S + +
Sbjct: 283 TQCHAIAIVNGLEL-DNILGTSLLNFYCKVGLIEYAEMIFDRMFEKDVVTWNLLISGYVQ 341
Query: 119 HGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G VED +++ C+L+R E + + ++ + ++L+ G+++ ++ + +++
Sbjct: 342 QGLVEDAIYM-CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCXCFRHSLESDIV 400
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+A++ ++MY +C I A+K+F +D++ WNT++ A AES + G+AL L+ M ++
Sbjct: 401 LASTAMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGHSGEALRLFYEMQLES 460
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN T+ N I+ + + A E + + S+ +
Sbjct: 461 VPPNVITW-----------NLIILSRLRNAEVNEAKEMFLQMQSSGI------------- 496
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
N++SW ++ G S +I L ++ + G RPN F+ + L +S
Sbjct: 497 -------TPNLISWTTMMNGMVQNGCSEEAIHFLRKMQESGMRPNAFSITVALSASANLA 549
Query: 357 LLQ----LHCLIIR-MGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANI 410
+H IIR + + + + SL+ YAK G I+ A F + L+ + A I
Sbjct: 550 SXHFGRSIHGYIIRNLRHSSSASIETSLVDMYAKCGDINKAERVFESKLSNELPLYNAMI 609
Query: 411 IAGIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
A Y G E V L LE +PD +++ +++AC H GD + + +F M
Sbjct: 610 SA--YALXGNVTEAVALYRSLEDMGXKPDSITFTSLLSACNHAGDIDQAIRVFTDM 663
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 149/654 (22%), Positives = 280/654 (42%), Gaps = 90/654 (13%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
RNV S+ +II R G E AL F+ M+ P F + +C +L G +
Sbjct: 125 RNVFSWAAIIGVKCRMGLCEGALMGFVEMLENEIFPDNFVVPNVFKACGALQWSRFGRGV 184
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
VLK GL FV ++L +YG+ G LD+ VF+++P +++V WN+++ + ++G
Sbjct: 185 HGYVLKAGLEDC-VFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGM 243
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E+ + L ++ + V T + + +N +E G Q H + I NG + + ++ S
Sbjct: 244 NEEAIRLLSDMRKDGVEPTRVTVSTCLSASANMAGVEEGTQCHAIAIVNGLELDNILGTS 303
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L+N Y + I AE +F + +DVV+WN +I + A+ + M ++ + +
Sbjct: 304 LLNFYCKVGLIEYAEMIFDRMFEKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLEKLKYD 363
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
T ++++ A +N LGK + +++LE D+ + S +D YAKC ++ A F
Sbjct: 364 CVTLATLMSAAARTENLKLGKEVQCXCFRHSLESDIVLASTAMDMYAKCGSIVDAKKVFD 423
Query: 302 EISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL------- 353
K+++ WN L+ YA S S ++ L E+ PN T++ ++ S L
Sbjct: 424 STVEKDLILWNTLLAAYAESGHSGEALRLFYEMQLESVPPNVITWNLIILSRLRNAEVNE 483
Query: 354 -AFQLLQLHCLIIRMGYENYEYVLGSL------------MTSYAKSGLISDALAFVTALN 400
LQ+ I ++ ++ + + +SG+ +A + AL+
Sbjct: 484 AKEMFLQMQSSGITPNLISWTTMMNGMVQNGCSEEAIHFLRKMQESGMRPNAFSITVALS 543
Query: 401 IP--------------------RAVVPANI---IAGIYNRTGQYNETVKLLSQLERPDIV 437
R A+I + +Y + G N+ ++ ++
Sbjct: 544 ASANLASXHFGRSIHGYIIRNLRHSSSASIETSLVDMYAKCGDINKAERVFESKLSNELP 603
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
+N +I+A A G+ E + L++ + PD+ TF SLLSAC+
Sbjct: 604 LYNAMISAYALXGNVTEAVALYRSLEDMGXKPDSITFTSLLSACN--------------- 648
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF--AQ 555
G I ++++F +M + + L ++ F A+
Sbjct: 649 ---------------------HAGDIDQAIRVFTDMVSNHGVKPCLEHYGLLVDLFASAK 687
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS-YGVEPE 608
+ R ME + +KPD + +++ +C + EL + ++R EPE
Sbjct: 688 ETDKALRLMEEMPYKPDXRMIQSLVASCNK----QHKTELVDYLSRQLLETEPE 737
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 153/534 (28%), Positives = 265/534 (49%), Gaps = 42/534 (7%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI------------ 204
+ Q+HGL K GF ++ NS+++MY +C I++AE++F +E
Sbjct: 9 IRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFSWNCMIYG 68
Query: 205 -------------------RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
RD VSWNTII A + ++L ++ M + PN T+
Sbjct: 69 YSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTY 128
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
V+++CA + + GK +HA++++ DV VG+ LVD YAKC ++ + F+ +
Sbjct: 129 ASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLRE 188
Query: 306 KNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVL-----RSSLAFQLLQ 359
N+V+W +LI G A S ++ + ++ + + F + +L ++++ Q
Sbjct: 189 HNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETNISIGE-Q 247
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIAGIYNRT 418
LH ++ G + V + ++ YAK G A LAF T V+ + ++ +
Sbjct: 248 LHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMA--AHDVISWTTMITSFSHS 305
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
G +++ +++SWN ++ A N ++E L+L+ M + PD TFV+++
Sbjct: 306 GNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMI 365
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
ACS+L LG+ + K + SD V N I +Y +CG I + +F+ + ++N+
Sbjct: 366 GACSELAISKLGTQILSQAVKVGL-GSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNL 424
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
I+W +++ NG + +E F+ M G KPD + IA+L+ C H GLV+E F
Sbjct: 425 ISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFNS 484
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M + +G+ ++H+ C+VDL R G LK A +I MPF PNA IW L C+
Sbjct: 485 MTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACR 538
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 127/539 (23%), Positives = 261/539 (48%), Gaps = 31/539 (5%)
Query: 48 LSCDSLNPVEGAQLQASVLKNGLFCADAFV-GTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
+ CD++ E Q+ + K LF + + G + L GR + F MP +
Sbjct: 39 IKCDAIYAAE--QVFLRIEKPSLFSWNCMIYGYSKLHEMGR------AIDTFRQMPERDS 90
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
V+WN+I+S F HG + F E+ ++ V+ +N D ++G+ +H
Sbjct: 91 VSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTYASVLSACANIYDFQWGKHLHAR 150
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
+++ ++LV N LV+MY +C I +++++F + +VV+W ++I +A + +
Sbjct: 151 IVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLREHNVVTWTSLISGIAHFGSQEEV 210
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
+++ +M D V + ++ C G N +G+ +H +K + V VG+A +
Sbjct: 211 YDIFYQMRKDCVIMDNFILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSM 270
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFS 346
YAKC + E A L F ++ +++SW +I + S ++ + N +++
Sbjct: 271 YAKCGDFEKASLAFETMAAHDVISWTTMITSF---SHSGNVERARDYFNRMPERNVISWN 327
Query: 347 HVL----RSSLAFQLLQLHCLIIRM----GYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
+L ++S + L+L+ L++R + + ++G+ + A S L + L+
Sbjct: 328 AMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGAC-SELAISKLGTQILSQAVK 386
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
+ + V N +Y+R G+ E L ++ +++SWN ++ A NG+ +V+E+
Sbjct: 387 VGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVIEI 446
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH--GLIKKTEI-ISSDTFVCNMLID 515
F+ M A PD+ T++++LS CS L + H + K I ++ + FVC ++D
Sbjct: 447 FQNMLMAGCKPDHITYIAILSGCSH-SGLVKEAKYHFNSMTKDFGISVTLEHFVC--MVD 503
Query: 516 MYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNG---FAQRALEKFREMEFLGFK 570
++G+ G + ++ + ++M + N W AL+SA ++ A+ A++ E+ F+
Sbjct: 504 LFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHHDTEMAELAMKNLLELNTENFE 562
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/541 (24%), Positives = 250/541 (46%), Gaps = 47/541 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+R+ VS+N+IISA+S G +L F+ M +G +P T+ +LS C ++ + G
Sbjct: 85 MPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTYASVLSACANIYDFQWG 144
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L A +++ F D VG L+ +Y + G +D VF + ++VTW S++S
Sbjct: 145 KHLHARIVRVEPFL-DVLVGNGLVDMYAKCGLIDASKRVFNTLREHNVVTWTSLISGIAH 203
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGL-SNEQDLEFGEQIHGLVIKNGFDYELL 177
G E+ +F ++ R + + ++ + I G+ E ++ GEQ+HG +K G + +
Sbjct: 204 FGSQEEVYDIFYQM-RKDCVIMDNFILATILGVCEGETNISIGEQLHGFTVKTGMNSSVP 262
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA----------- 226
V N+ ++MY +C A F+ + DV+SW T+I + + S N +A
Sbjct: 263 VGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERN 322
Query: 227 --------------------LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
L+LY+ M V P+ TFV +I +C+ L S LG I +
Sbjct: 323 VISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILS 382
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS 326
+ +K L DV V ++ + Y++C +E A F I KN++SWN+++ GYA
Sbjct: 383 QAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMK 442
Query: 327 IFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLLQ-----LHCLIIRMGYENYEYVLGSLM 380
+ + + +L G +P+ T+ +L L++ + + G ++
Sbjct: 443 VIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFNSMTKDFGISVTLEHFVCMV 502
Query: 381 TSYAKSGLISDALAFVTALNI-PRAVVPANIIAG--IYNRTGQYNETVKLLSQLERPDIV 437
+ ++GL+ AL + + P A + +++ I++ T +K L +L +
Sbjct: 503 DLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHHDTEMAELAMKNLLELNTENFE 562
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
S+ ++ + G + V E+ + M+ R+ D S + C+++ + H +
Sbjct: 563 SYILLANTYSSFGRLECVSEVRQVMKEKRVQKD--PGCSWIEVCNRVHVFTANDTSHPQV 620
Query: 498 K 498
K
Sbjct: 621 K 621
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/469 (21%), Positives = 186/469 (39%), Gaps = 106/469 (22%)
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+C+ + + +H K + + ++++D Y KCD + A F I ++ S
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 311 WNALILGYAS-----------KSSP---------------------TSIFLLIELLQLGY 338
WN +I GY+ + P S+ +E+ G
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121
Query: 339 RPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVL--GSLMTSYAKSGLISDA 392
+PN T++ VL + Q LH I+R+ E + VL L+ YAK GLI
Sbjct: 122 QPNSMTYASVLSACANIYDFQWGKHLHARIVRV--EPFLDVLVGNGLVDMYAKCGLI--- 176
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+ + ++ + L ++V+W +I+ AH G
Sbjct: 177 -----------------------------DASKRVFNTLREHNVVTWTSLISGIAHFGSQ 207
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
+EV ++F MR + DN+ ++L C N+++G LHG KT + SS V N
Sbjct: 208 EEVYDIFYQMRKDCVIMDNFILATILGVCEGETNISIGEQLHGFTVKTGMNSS-VPVGNA 266
Query: 513 LIDMYGKC-------------------------------GSIGSSVKIFNEMTDRNVITW 541
+ MY KC G++ + FN M +RNVI+W
Sbjct: 267 TLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISW 326
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
A++ A N F + L+ + M +PD + + ++ AC + + G ++ + +
Sbjct: 327 NAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVK 386
Query: 602 SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G+ ++ + + L R G ++EA+ + ++ N + W + + G
Sbjct: 387 -VGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQ-EKNLISWNSIMGG 433
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 161/502 (32%), Positives = 258/502 (51%), Gaps = 12/502 (2%)
Query: 161 EQIHGLVIKNGFDYELLVANSL--VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+Q H +I+ G + A+ L + A + A K+F ++ + +WNT+I A A
Sbjct: 48 KQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYA 107
Query: 219 ESENFGKALELYLRM--SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ ++ +L M S +PN+ TF ++I + A + + LG+S+H IK+A+ D
Sbjct: 108 SGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSD 167
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
VFV ++L+ Y C +L+ A F+ I K++VSWN++I G+ K SP L + ++
Sbjct: 168 VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES 227
Query: 337 -GYRPNEFTFSHVLRSSLAFQLLQLH---CLIIRMGYENYEYVLGSLMTS-YAKSGLISD 391
+ + T VL + + L+ C I N L + M Y K G I D
Sbjct: 228 EDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIED 287
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
A A+ V ++ G Y + Y ++L+ + + DIV+WN +I+A NG
Sbjct: 288 AKRLFDAMEEKDNVTWTTMLDG-YAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGK 346
Query: 452 YKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
E L +F ++ + I + T VS LSAC+++ L LG +H IKK I + +V
Sbjct: 347 PNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGI-KMNFYVT 405
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
+ LI MY KCG + + ++FN + R+V W+A+I L ++G A++ F +M+ K
Sbjct: 406 SALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVK 465
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
P+ V V AC H GLV E LF +M SYG+ PE HY C+VD+L R G+L++A K
Sbjct: 466 PNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVK 525
Query: 631 IITTMPFPPNALIWRTFLEGCQ 652
I MP PP+ +W L C+
Sbjct: 526 FIEAMPIPPSTSVWGALLGACK 547
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/559 (23%), Positives = 262/559 (46%), Gaps = 52/559 (9%)
Query: 38 EPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYG--RHGCLDEVV 95
E ++ T + C SL ++ Q A +++ G+F +D + + L + L+
Sbjct: 29 ERSRHTISLIDRCSSLRQLK--QTHAHMIRTGMF-SDPYSASKLFAIAALSSFASLEYAR 85
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVAL--TESSFVGVIHGLSN 153
VF+++P+ + TWN+++ + ++ F ++V SE + +F +I +
Sbjct: 86 KVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAE 145
Query: 154 EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTI 213
L G+ +HG+ IK+ ++ VANSL++ YF C + SA K+F ++ +DVVSWN++
Sbjct: 146 VSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSM 205
Query: 214 IGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
I + + KALEL+ +M + V + T V V+++CA +++ G+ + + + +N +
Sbjct: 206 INGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRV 265
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-------------- 319
++ + +A++D Y KC ++E A F + K+ V+W ++ GYA
Sbjct: 266 NVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNA 325
Query: 320 -SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS 378
K + LI + +PNE LL H L ++ + + L S
Sbjct: 326 MPKKDIVAWNALISAYEQNGKPNE-------------ALLVFHELQLQKNIKLNQITLVS 372
Query: 379 LMTSYAKSGLISDAL---AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
+++ A+ G + +++ I + + +Y++ G + ++ + +E+ D
Sbjct: 373 TLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRD 432
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
+ W+ +I A +G E +++F M+ A + P+ TF ++ ACS + L
Sbjct: 433 VFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACS---HTGLVDEAES 489
Query: 496 LIKKTE----IISSDT-FVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALG 549
L K E I+ D + C ++D+ G+ G + +VK M + W AL+ A
Sbjct: 490 LFYKMESSYGIVPEDKHYAC--IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACK 547
Query: 550 LNG---FAQRALEKFREME 565
++ A+ A + E+E
Sbjct: 548 IHANLSLAEMACTRLLELE 566
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+ +++VVS+NS+I+ + + G + AL +F M + + + T G+LS C + +E
Sbjct: 194 IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFG 253
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVF--------------------- 98
+ S ++ + + A+L +Y + G +++ +F
Sbjct: 254 RRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 313
Query: 99 ED----------MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL-VRSEVALTESSFVGV 147
ED MP+K +V WN+++S + ++G + + +F EL ++ + L + + V
Sbjct: 314 EDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVST 373
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
+ + LE G IH + KNG V ++L++MY +C + A ++F VE RDV
Sbjct: 374 LSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDV 433
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
W+ +IG LA +A++++ +M V PN TF V +C+
Sbjct: 434 FVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACS 479
>gi|255583011|ref|XP_002532274.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528034|gb|EEF30114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 631
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 164/598 (27%), Positives = 282/598 (47%), Gaps = 76/598 (12%)
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
MP ++L++W+S+VS++ K GF E+ + +F + R + + +
Sbjct: 1 MPERNLISWSSVVSMYSKRGFSEEALLVFLDFKRCCNENPNEYILASVISACVQVGGSID 60
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
+Q+HG +K+GFD + V SLV++Y + I A +F + + V+W TII A +
Sbjct: 61 KQMHGFAVKSGFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVKR 120
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
+L+L+ +M V P+ V+ +C+ L+ GK IH V++ +E DV
Sbjct: 121 GRSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSFV 180
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYR 339
+ L+DFY K ++ A F ++++N++SW A+I GY S ++ L IE+ +LG R
Sbjct: 181 NVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLGRR 240
Query: 340 PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
P+ F + +L S + + L+L G + +Y+ G
Sbjct: 241 PDGFVCTSILTSCGSLEALEL----------------GRQVHAYSIKG------------ 272
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
N+ + N + +Y + G N+ K+ + ++VS+N +I + E + LF
Sbjct: 273 NVESDIFLQNGLIDMYAKCGSLNDARKVFDDMTIRNVVSYNALIEGYSTLEQLSEAMNLF 332
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
+ MR + P TFVSLL A + L L LG +H LI K I S + F + LID Y K
Sbjct: 333 REMRHGMLSPSFLTFVSLLGASATLSALELGKQIHALITKFGI-SMEIFAGSALIDFYSK 391
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
C + + +F++MT+++++ W A++ + AL+ + E++ KP+ V A+
Sbjct: 392 CSCLMDARLVFDKMTEKDIVVWNAMLFGYTQQLENEEALKLYTELQISEPKPNVVTFAAL 451
Query: 580 LTAC------RHG---------------------------------------GLVREGME 594
TA +HG G V++G+
Sbjct: 452 TTAASNLASLQHGQQFHNHIIKTGLDSHPFTTNSLIDMYAKCGSLEDARKAFGHVKDGLH 511
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
FE M + + ++P +HY CVV LL R G L EA++ I MP P A++WR+ L C+
Sbjct: 512 YFESMPK-FSIKPGTEHYACVVSLLGRSGKLYEAKEFIEKMPTEPEAVVWRSLLSACR 568
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 174/619 (28%), Positives = 298/619 (48%), Gaps = 58/619 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLLS-CDSLNPVEG 58
MP+RN++S++S++S YS+ G+ E+AL +FL E P ++ ++S C +
Sbjct: 1 MPERNLISWSSVVSMYSKRGFSEEALLVFLDFKRCCNENPNEYILASVISACVQVGGSID 60
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K+G F + +VGT+L+ LY + G +DE VF+ + KS VTW +I++ K
Sbjct: 61 KQMHGFAVKSG-FDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVK 119
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E + LF ++ + V V+ S + ++ G+QIHG V++ G + ++
Sbjct: 120 RGRSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSF 179
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N L++ Y + + SA K+F + R+V+SW +I ++ +A++L++ M+
Sbjct: 180 VNVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLGR 239
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ ++ SC L+ LG+ +HA IK +E D+F+ + L+D YAKC +L A
Sbjct: 240 RPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARK 299
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQL 357
F +++ +N+VS+NALI GY++ + L ++ G P+ TF +L +S
Sbjct: 300 VFDDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSA 359
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L Q+H LI + G + +L+ Y+K + DA R V
Sbjct: 360 LELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDA----------RLV-------- 401
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++ DIV WN ++ + +E L+L+ ++ + P+ T
Sbjct: 402 --------------FDKMTEKDIVVWNAMLFGYTQQLENEEALKLYTELQISEPKPNVVT 447
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F +L +A S L +L G H I KT + S F N LIDMY KCGS+ + K F +
Sbjct: 448 FAALTTAASNLASLQHGQQFHNHIIKTG-LDSHPFTTNSLIDMYAKCGSLEDARKAFGHV 506
Query: 534 TD--------------RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
D + ++S LG +G A E +M +P+ V ++
Sbjct: 507 KDGLHYFESMPKFSIKPGTEHYACVVSLLGRSGKLYEAKEFIEKMP---TEPEAVVWRSL 563
Query: 580 LTACRHGGLVREGMELFER 598
L+ACR G V G E+
Sbjct: 564 LSACRVSGNVELGKYAAEK 582
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 146/529 (27%), Positives = 261/529 (49%), Gaps = 37/529 (6%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA-Q 60
+++ V++ +II+A + G E +L++F M P + +L +C L V+G Q
Sbjct: 104 EKSAVTWTTIITACVKRGRSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQ 163
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ VL+ G+ +FV L+ Y + G + +F+ M +++++W ++++ + ++
Sbjct: 164 IHGHVLRRGIEIDVSFV-NVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNS 222
Query: 121 FVEDCMFLFCELVRSEVALTESSFV--GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
F + + LF E+ R + FV ++ + + LE G Q+H IK + ++ +
Sbjct: 223 FDREAVKLFIEMTR--LGRRPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFL 280
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N L++MY +C + A K+F D+ IR+VVS+N +I + E +A+ L+ M ++
Sbjct: 281 QNGLIDMYAKCGSLNDARKVFDDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGML 340
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ TFV ++ + A L LGK IHA + K + ++F GSAL+DFY+KC L A L
Sbjct: 341 SPSFLTFVSLLGASATLSALELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARL 400
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQL 357
F +++ K+IV WNA++ GY + L LQ+ +PN TF+ + ++
Sbjct: 401 VFDKMTEKDIVVWNAMLFGYTQQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLAS 460
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL-AFVTALNIPRAVVPANIIA 412
L Q H II+ G +++ + SL+ YAK G + DA AF ++
Sbjct: 461 LQHGQQFHNHIIKTGLDSHPFTTNSLIDMYAKCGSLEDARKAF------------GHVKD 508
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
G++ Y E++ S +P + V++ +G E E + M P+
Sbjct: 509 GLH-----YFESMPKFSI--KPGTEHYACVVSLLGRSGKLYEAKEFIEKMPTE---PEAV 558
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
+ SLLSAC N+ LG + K I S+D+ +L ++Y G
Sbjct: 559 VWRSLLSACRVSGNVELGK--YAAEKAISIDSTDSGSYTLLSNIYASKG 605
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/610 (26%), Positives = 292/610 (47%), Gaps = 31/610 (5%)
Query: 44 FGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR 103
F LL S N + A ++ N L D FV T L+ Y L+ VF+ +
Sbjct: 34 FLSLLRESSKNLIWVKSTHAQIITNSL-STDQFVATKLVKAYSDLRSLEAARYVFDQFFQ 92
Query: 104 KSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI 163
+ N+++ + + G + + LF + + + S + ++ D E G +I
Sbjct: 93 PKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEI 152
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
++ G + V +S+++ + I A+++F + +DVV WN+IIG ++ F
Sbjct: 153 ISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCF 212
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
A +L+ M + P+ T +I +C G+ N LGK +H V+ L D+ V ++
Sbjct: 213 DVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSF 272
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEF 343
VD Y+K ++E A F ++ +N+VSWNA+I G F L
Sbjct: 273 VDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDL------------- 319
Query: 344 TFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
F ++RSS F L + L+ G T+ +G I A +
Sbjct: 320 -FHRLVRSSGGFDLTTIVSLL-----------QGCSQTASLATGKILHGCAIRS---FES 364
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
++ + I +Y++ G + + ++++ ++++W ++ A NG ++ L LF M+
Sbjct: 365 NLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQ 424
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
I ++ TFVSL+ +C+ L +L G S+HG + + + D L+DMY KCG I
Sbjct: 425 EEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLG-FAFDIVNMTALVDMYAKCGKI 483
Query: 524 GSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ +IF+ + ++V+ W ++I+ G++G +A+ + +M G KP++ +++L+A
Sbjct: 484 NLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSA 543
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H LV +G+ LF M R + + P HY C+VDLL R G +EA+ +I MPF P
Sbjct: 544 CSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTA 603
Query: 643 IWRTFLEGCQ 652
+ L GC+
Sbjct: 604 VLEALLSGCR 613
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 201/363 (55%), Gaps = 6/363 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+++VV +NSII Y + G + A ++F M G +P+ T L+ +C + ++ G
Sbjct: 191 MPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLG 250
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ VL GL D V T+ + +Y + G ++ VF MP ++LV+WN+++S +
Sbjct: 251 KCMHGYVLGLGL-GNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVR 309
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G V + LF LVRS ++ V ++ G S L G+ +HG I++ F+ L++
Sbjct: 310 NGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLIL 368
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ ++V++Y +C + A +F ++ R+V++W ++ LA++ + AL L+ +M + +
Sbjct: 369 STAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGI 428
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N TFV +++SCA L + G+SIH + + D+ +ALVD YAKC + A
Sbjct: 429 AANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAER 488
Query: 299 CFSEIS-NKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
FS S +K++V WN++I GY ++ + ++++ G +PN+ TF +L + +
Sbjct: 489 IFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSR 548
Query: 357 LLQ 359
L++
Sbjct: 549 LVE 551
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M DRNV+++ +++ ++ G+ EDALR+F M G TF L+ SC L ++ G
Sbjct: 392 MKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRG 451
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
+ + + G F D TAL+ +Y + G ++ +F K +V WNS+++ +G
Sbjct: 452 RSIHGHLFRLG-FAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYG 510
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
HG + ++ +++ + +++F+ ++ S+ + +E G
Sbjct: 511 MHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQG 553
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/508 (29%), Positives = 255/508 (50%), Gaps = 43/508 (8%)
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE--IRDVVSWNT 212
+ L+ QIH +I N + + N+L+N+Y +C + A +F + +V+W +
Sbjct: 156 RSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTS 215
Query: 213 IIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
+I L+ +AL L+ +M +PNQ TF ++++ A + G+ +H+ + K+
Sbjct: 216 LITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHG 275
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS---SPTSIFL 329
+ ++FVG+ALVD YAKC ++ A F ++ +N+VSWN++I+G+ + +F
Sbjct: 276 FDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFK 335
Query: 330 LIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAK 385
+ L + PNE + S VL + L Q+H ++++ G YV+ SLM Y K
Sbjct: 336 DV-LREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFK 394
Query: 386 SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA 445
++E VKL + D+V+WN+++
Sbjct: 395 CRF--------------------------------FDEGVKLFQCVGDRDVVTWNVLVMG 422
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
N ++E F MR I PD +F ++L + + L L G+++H I K +
Sbjct: 423 FVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVK- 481
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
+ + LI MY KCGS+ + ++F + D NVI+WTA+ISA L+G A + +E F M
Sbjct: 482 NMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHML 541
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G +P V + VL+AC H G V EG+ F M + + + P +HY C+VDLL R G L
Sbjct: 542 SEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWL 601
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQR 653
EA++ I +MP P +W L C++
Sbjct: 602 DEAKRFIESMPMKPTPSVWGALLGACRK 629
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 160/640 (25%), Positives = 292/640 (45%), Gaps = 77/640 (12%)
Query: 2 PDRNVVSFNSIISAY-SRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCD------SLN 54
P V++ I+++ R D LR RG P +F GL LN
Sbjct: 90 PTPKVLTLKFAINSHCGRLAVARDGLRCDAM---RGPSPLKFFHKGLSPTPPSPSPTHLN 146
Query: 55 PVEGAQLQASVLKNGL----------FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR- 103
+ +Q LK+ + + F+ L+ LY + GCL++ + +F
Sbjct: 147 HLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHH 206
Query: 104 -KSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ 162
K++VTW S+++ + LF ++ S + +F ++ + + G+Q
Sbjct: 207 FKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQ 266
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
+H L+ K+GFD + V +LV+MY +CA + SA ++F + R++VSWN++I +
Sbjct: 267 LHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNL 326
Query: 223 FGKALELYLR-MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
+ +A+ ++ + V PN+ + V+++CA + G+ +H V+K L +V +
Sbjct: 327 YDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMN 386
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS---PTSIFLLIELLQLGY 338
+L+D Y KC + F + ++++V+WN L++G+ + F ++ + G
Sbjct: 387 SLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMR--REGI 444
Query: 339 RPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
P+E +FS VL SS + L +H II++GY +LGSL+T YAK G + DA
Sbjct: 445 LPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAY- 503
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
++ +E +++SW +I+A +G +
Sbjct: 504 -------------------------------QVFEGIEDHNVISWTAMISAYQLHGCANQ 532
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS--SDTFVCNM 512
V+ELF++M + I P + TFV +LSACS + G + +KK ++ + + C
Sbjct: 533 VIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYAC-- 590
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVIT-WTALISALGLNG---FAQRALEKFREMEFLG 568
++D+ G+ G + + + M + + W AL+ A G + A E+ EME
Sbjct: 591 MVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEME--P 648
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
+ P L+A + C G + E E+ R+ GV E
Sbjct: 649 YNPGNYVLLANM--CTRSGRLEEANEV-RRLMGVNGVRKE 685
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 134/256 (52%), Gaps = 4/256 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLLS-CDSLNPVE- 57
MP+RN+VS+NS+I + + A+ +F ++ + P + + +LS C ++ +
Sbjct: 306 MPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNF 365
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ V+K GL +V +L+ +Y + DE V +F+ + + +VTWN +V F
Sbjct: 366 GRQVHGVVVKYGL-VPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFV 424
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ E+ F + R + E+SF V+H ++ L G IH +IK G+ +
Sbjct: 425 QNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMC 484
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ SL+ MY +C + A ++F+ +E +V+SW +I A + +EL+ M +
Sbjct: 485 ILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEG 544
Query: 238 VFPNQTTFVYVINSCA 253
+ P+ TFV V+++C+
Sbjct: 545 IEPSHVTFVCVLSACS 560
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/603 (28%), Positives = 285/603 (47%), Gaps = 41/603 (6%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G Q A +L NG+ + +GT LLG+Y G + ++F + WN ++ F
Sbjct: 64 QGRQAHAQMLVNGI-GYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGF 122
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G + + + +++ + +F VI + G +H + GF+ ++
Sbjct: 123 TMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDV 182
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V +SL+ Y + I A +F + +D V WN ++ ++ ++ A +++ M
Sbjct: 183 FVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRT 242
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS--ALVDFYAKCDNLE 294
PN TF V++ CA G +H V+ + LE D V + AL+D Y KC ++E
Sbjct: 243 ETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVE 302
Query: 295 GAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F + + +IV A+I GY + + ++ + LLQ R N T + VL +
Sbjct: 303 MARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACA 362
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
L +LH I++ G+ YV ++M YAK G + LA T + I
Sbjct: 363 GLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLD--LAHQTFIGI-------- 412
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
D V WN +I +C+ NG +E ++LF+ M A
Sbjct: 413 ----------------------SDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKY 450
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D + + LSAC+ L L G +H + + SD F + LIDMY KCG++ + ++
Sbjct: 451 DCVSISAALSACANLPALHYGKEIHAFMMRGAF-RSDLFAESALIDMYSKCGNLDLACRV 509
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F+ M ++N ++W ++I+A G +G + +L F M G +PD V +A+++AC H G V
Sbjct: 510 FDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQV 569
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG+ F M G+ M+HY C+VDL R G L EA +I +MPF P+A +W T L
Sbjct: 570 DEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLG 629
Query: 650 GCQ 652
C+
Sbjct: 630 ACR 632
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 153/560 (27%), Positives = 272/560 (48%), Gaps = 45/560 (8%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQASVLK 67
+N +I ++ G + AL + M+ G P ++TF ++ +C LN V ++ ++
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174
Query: 68 NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMF 127
F D FVG++L+ Y +GC+ + +F+ MP K V WN +++ + K+G ++
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234
Query: 128 LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS--LVNM 185
+F E+ R+E +F V+ ++E + FG Q+HGLV+ +G + + VAN+ L+++
Sbjct: 235 VFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDI 294
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
YF+C + A K+F D+V +I + ALE++ + + + N T
Sbjct: 295 YFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTL 354
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
V+ +CAGL LGK +H ++KN +VGSA++D YAKC L+ AH F IS+
Sbjct: 355 ASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISD 414
Query: 306 KNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
K+ V WN++I + P +I L ++ G + + + S L S L LH
Sbjct: 415 KDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAAL--SACANLPALH--- 469
Query: 365 IRMGYENYEYVLGSLMTS--YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
G E + +++ S +A+S LI +Y++ G +
Sbjct: 470 --YGKEIHAFMMRGAFRSDLFAESALID-----------------------MYSKCGNLD 504
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
++ +E + VSWN +IAA ++G K+ L LF M I PD+ TF++++SAC
Sbjct: 505 LACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACG 564
Query: 483 KLCNLALGSSLHGLIKKTE----IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRN 537
+ G +H TE + + + C ++D++G+ G + + + N M +
Sbjct: 565 HAGQVDEG--IHYFRCMTEELGIMARMEHYAC--MVDLFGRAGRLNEAFGMINSMPFSPD 620
Query: 538 VITWTALISALGLNGFAQRA 557
W L+ A L+G + A
Sbjct: 621 AGVWGTLLGACRLHGNVELA 640
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 236/513 (46%), Gaps = 44/513 (8%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
V ++ ++ L G Q H ++ NG Y ++ L+ MY C A+ +F +
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
+ WN +I F AL Y +M P++ TF YVI +C GL + LG+
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-- 321
+H K+ E DVFVGS+L+ FY++ + A F + +K+ V WN ++ GY
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 322 -SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-----QLHCLIIRMGYENYEYV 375
+ T +F+ E+ + PN TF+ VL S A +++ QLH L++ G E
Sbjct: 229 WDNATGVFM--EMRRTETNPNSVTFACVL-SVCASEIMINFGSQLHGLVVSSGLE----- 280
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
++ P A A I IY + K+ Q D
Sbjct: 281 -----------------------MDSPVANTFALI--DIYFKCRDVEMARKIFDQRTPVD 315
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
IV +I+ NG LE+F+++ R+ ++ T S+L AC+ L L LG LHG
Sbjct: 316 IVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHG 375
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
I K S +V + ++DMY KCG + + + F ++D++ + W ++I++ NG +
Sbjct: 376 HILKNGHGGS-CYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPE 434
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
A++ FR+M G K D V++ A L+AC + + G E+ M R ++ +
Sbjct: 435 EAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRG-AFRSDLFAESAL 493
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+D+ + G+L A ++ TM N + W + +
Sbjct: 494 IDMYSKCGNLDLACRVFDTME-EKNEVSWNSII 525
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 126/251 (50%), Gaps = 3/251 (1%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQ 62
++V ++IS Y G +AL +F +++ T +L +C L + G +L
Sbjct: 315 DIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELH 374
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+LKNG +VG+A++ +Y + G LD F + K V WNS+++ ++G
Sbjct: 375 GHILKNG-HGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKP 433
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
E+ + LF ++ + S + +N L +G++IH +++ F +L ++L
Sbjct: 434 EEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESAL 493
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
++MY +C + A ++F +E ++ VSWN+II A +L L+ M D + P+
Sbjct: 494 IDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDH 553
Query: 243 TTFVYVINSCA 253
TF+ +I++C
Sbjct: 554 VTFLAIISACG 564
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 90/164 (54%), Gaps = 5/164 (3%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
D++ V +NS+I++ S+ G E+A+ +F M G + + LS C +L + G +
Sbjct: 414 DKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKE 473
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ A +++ G F +D F +AL+ +Y + G LD VF+ M K+ V+WNSI++ +G HG
Sbjct: 474 IHAFMMR-GAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHG 532
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIH 164
++D + LF ++ + +F+ +I + ++ E IH
Sbjct: 533 RLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVD--EGIH 574
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
M ++N VS+NSII+AY G ++D+L +F M+ G +P TF ++S C V EG
Sbjct: 513 MEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEG 572
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
+ + A ++ L+GR G L+E + MP W +++
Sbjct: 573 IHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACR 632
Query: 118 KHGFVE 123
HG VE
Sbjct: 633 LHGNVE 638
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 161/501 (32%), Positives = 258/501 (51%), Gaps = 11/501 (2%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNM--YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+Q HG +I+ G + A+ L M A + A K+F ++ + +WNT+I A A
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 219 ESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
+ ++ +L M S +PN+ TF ++I + A + + LG+S+H +K+A+ DV
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL- 336
FV ++L+ Y C +L+ A F+ I K++VSWN++I G+ K SP L + ++
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQLH---CLIIRMGYENYEYVLGSLMTS-YAKSGLISDA 392
+ + T VL + + L+ C I N L + M Y K G I DA
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
A+ V ++ G Y + Y ++L+ + + DIV+WN +I+A NG
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDG-YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKP 345
Query: 453 KEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
E L +F ++ + + + T VS LSAC+++ L LG +H IKK I + V +
Sbjct: 346 NEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFHVTS 404
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
LI MY KCG + S ++FN + R+V W+A+I L ++G A++ F +M+ KP
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ V V AC H GLV E LF +M +YG+ PE HY C+VD+L R G+L++A K
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524
Query: 632 ITTMPFPPNALIWRTFLEGCQ 652
I MP PP+ +W L C+
Sbjct: 525 IEAMPIPPSTSVWGALLGACK 545
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/533 (22%), Positives = 251/533 (47%), Gaps = 43/533 (8%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYG--RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q +++ G F +D + + L + L+ VF+++P+ + WN+++ +
Sbjct: 48 QTHGHMIRTGTF-SDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 118 KHGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ F ++V S+ + +F +I + L G+ +HG+ +K+ ++
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VANSL++ YF C + SA K+F ++ +DVVSWN++I + + KALEL+ +M +
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V + T V V+++CA ++N G+ + + + +N + ++ + +A++D Y KC ++E A
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 297 HLCFSEISNKNIVSWNALILGYAS-----------KSSPTSIFL----LIELLQLGYRPN 341
F + K+ V+W ++ GYA S P + LI + +PN
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 342 EFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL---AFVTA 398
E L+ H L ++ + + L S +++ A+ G + +++
Sbjct: 347 E-------------ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
I + + +Y++ G ++ ++ + +E+ D+ W+ +I A +G E +++
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDM 453
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL-HGLIKKTEIISSDT-FVCNMLIDM 516
F M+ A + P+ TF ++ ACS + SL H + I+ + + C ++D+
Sbjct: 454 FYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC--IVDV 511
Query: 517 YGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
G+ G + +VK M + W AL+ A ++ A+ A + E+E
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELE 564
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 137/286 (47%), Gaps = 33/286 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+ +++VVS+NS+I+ + + G + AL +F M + + + T G+LS C + +E
Sbjct: 192 IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 251
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE-------------------- 99
+ S ++ + + A+L +Y + G +++ +F+
Sbjct: 252 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 311
Query: 100 -----------DMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL-VRSEVALTESSFVGV 147
MP+K +V WN+++S + ++G + + +F EL ++ + L + + V
Sbjct: 312 EDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVST 371
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
+ + LE G IH + K+G V ++L++MY +C + + ++F VE RDV
Sbjct: 372 LSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV 431
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
W+ +IG LA +A++++ +M V PN TF V +C+
Sbjct: 432 FVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 159/503 (31%), Positives = 260/503 (51%), Gaps = 17/503 (3%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNM--YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+QIH +++ G ++ A+ L+ + A+++F + ++ +WNT+I A A
Sbjct: 52 KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYA 111
Query: 219 ESENFGKALELYLRM---SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
S N ++L ++LRM S D FP++ TF ++I + + L+ GK+ H VIK L
Sbjct: 112 SSSNPHQSLLIFLRMLHQSPD--FPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGS 169
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELL 334
DVF+ ++L+ FYAKC L + F I +++VSWN++I + P ++ L E+
Sbjct: 170 DVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEME 229
Query: 335 QLGYRPNEFTFSHVL-----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
+PN T VL +S F +H I R + +++ Y K G +
Sbjct: 230 TQNVKPNGITMVGVLSACAKKSDFEFGRW-VHSYIERNRIGESLTLSNAMLDMYTKCGSV 288
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
DA + V ++ G Y + G+Y+ + + DI +WN +I+A
Sbjct: 289 EDAKRLFDKMPEKDIVSWTTMLVG-YAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQC 347
Query: 450 GDYKEVLELFKYMRAARI-YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
G KE LELF ++ ++ PD T VS LSAC++L + LG +H IKK + + +
Sbjct: 348 GKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKK-QGMKLNCH 406
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+ LIDMY KCG + ++ +F+ + ++V W+A+I+ L ++G + A+ F +M+
Sbjct: 407 LTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDK 466
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
KP+ V +L AC H GLV EG F +M YGV P + HY C+VD+L R G L+EA
Sbjct: 467 VKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEA 526
Query: 629 EKIITTMPFPPNALIWRTFLEGC 651
++I MP P A +W L C
Sbjct: 527 VELIEKMPMAPAASVWGALLGAC 549
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 125/527 (23%), Positives = 247/527 (46%), Gaps = 31/527 (5%)
Query: 60 QLQASVLKNGLFCADAFVGTALL--GLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ A +L+ GLF D F + L+ LD VF+ +P +L TWN+++ +
Sbjct: 53 QIHAQMLRTGLFF-DPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYA 111
Query: 118 KHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ +F ++ + +F +I S ++L G+ HG+VIK ++
Sbjct: 112 SSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDV 171
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ NSL++ Y +C + ++F ++ RDVVSWN++I A + +ALEL+ M
Sbjct: 172 FILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQ 231
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN T V V+++CA + G+ +H+ + +N + + + +A++D Y KC ++E A
Sbjct: 232 NVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDA 291
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNE---------FTFSH 347
F ++ K+IVSW +++GYA + + + + PN+ +
Sbjct: 292 KRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAM-----PNQDIAAWNALISAYEQ 346
Query: 348 VLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ A +L H L + + E L S +++ A+ G + L + I + +
Sbjct: 347 CGKPKEALEL--FHELQLSKTAKPDEVTLVSTLSACAQLGAMD--LGGWIHVYIKKQGMK 402
Query: 408 ANI-----IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
N + +Y + G + + + +ER D+ W+ +IA A +G K+ + LF M
Sbjct: 403 LNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKM 462
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ ++ P+ TF ++L ACS + + G + ++ + ++D+ G+ G
Sbjct: 463 QEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGL 522
Query: 523 IGSSVKIFNEMTDRNVIT-WTALISALGLNG---FAQRALEKFREME 565
+ +V++ +M + W AL+ A ++ A++A + E+E
Sbjct: 523 LEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELE 569
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 220/487 (45%), Gaps = 73/487 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLLSCDSL--NPVE 57
+P N+ ++N++I AY+ +L +FL M+++ + P +FTF L+ S
Sbjct: 95 IPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFT 154
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G V+K L +D F+ +L+ Y + G L VF ++PR+ +V+WNS+++ F
Sbjct: 155 GKAFHGMVIKV-LLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFV 213
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G E+ + LF E+ V + VGV+ + + D EFG +H + +N L
Sbjct: 214 QGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLT 273
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE------------------ 219
++N++++MY +C + A+++F + +D+VSW T++ A+
Sbjct: 274 LSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQD 333
Query: 220 ----------SENFGK---ALELYLRMSVD-IVFPNQTTFVYVINSCAGLQNSILGKSIH 265
E GK ALEL+ + + P++ T V +++CA L LG IH
Sbjct: 334 IAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIH 393
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SP 324
+ K ++ + + ++L+D Y KC +L+ A + F + K++ W+A+I G A
Sbjct: 394 VYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGK 453
Query: 325 TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
+I L ++ + +PN TF+++L + +
Sbjct: 454 DAIALFSKMQEDKVKPNAVTFTNIL-------------------------------CACS 482
Query: 385 KSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSW 439
GL+ + F + + V+P + I R G E V+L+ ++ P W
Sbjct: 483 HVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVW 542
Query: 440 NIVIAAC 446
++ AC
Sbjct: 543 GALLGAC 549
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/505 (31%), Positives = 270/505 (53%), Gaps = 21/505 (4%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS------AEKMFKDVEIRDVVSWNTII 214
+++H +++ G ++ A+ L F + + S A +F + ++ +WNT+I
Sbjct: 42 KEVHARMLRTGLFFDPFSASKL----FTASALSSFSTLDYARNLFDQIPQPNLYTWNTLI 97
Query: 215 GALAESENFGKALELYLRMSVDIV--FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
A A S + ++ ++L + +D PN+ TF +VI + + L+ S +G ++H IK +
Sbjct: 98 RAYASSSDPFQSFVIFLDL-LDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLS 156
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLI 331
D+++ ++LV FY C +L A F IS K++VSWN++I +A + P ++ L +
Sbjct: 157 FGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFL 216
Query: 332 ELLQLGYRPNEFTFSHVLRS---SLAFQLLQLHCLII-RMGYENYEYVLGSLMTSYAKSG 387
++ + PN T VL + L + + C I R G + + +++ Y K G
Sbjct: 217 KMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCG 276
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
+ DA + R V I+ Y + G Y+ + + + +I +WN++I+A
Sbjct: 277 SVDDAQKLFDEMP-ERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYE 335
Query: 448 HNGDYKEVLELFKYMRAARI-YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
NG KE L +F ++ ++I PD T VS LSAC++L + LG +H IK+ I+ +
Sbjct: 336 QNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNC 395
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
+ + L+DMY KCGS+ ++++F + +R+V W+A+I+ LG++G + A++ F EM+
Sbjct: 396 HLISS-LVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQE 454
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
KP+ V VL AC H GLV EG F M YGV PEM HY C+VD+L R G L+
Sbjct: 455 AKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLE 514
Query: 627 EAEKIITTMPFPPNALIWRTFLEGC 651
EA ++I M P+A +W L C
Sbjct: 515 EAMELINEMSTTPSASVWGALLGAC 539
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 251/519 (48%), Gaps = 46/519 (8%)
Query: 60 QLQASVLKNGLFCADAFVGTALL--GLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
++ A +L+ GLF D F + L LD ++F+ +P+ +L TWN+++ +
Sbjct: 43 EVHARMLRTGLFF-DPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYA 101
Query: 118 KHGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+F +L+ + E + +F VI S + G +HG+ IK F +L
Sbjct: 102 SSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDL 161
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ NSLV Y C + AE++FK + +DVVSWN++I A A+ ALEL+L+M +
Sbjct: 162 YILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERE 221
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN T V V+++CA + G+ + + + + ++ D+ + +A++D Y KC +++ A
Sbjct: 222 NVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDA 281
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL------- 349
F E+ +++ SW ++ GYA + L+ + + E +VL
Sbjct: 282 QKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPV----KEIAAWNVLISAYEQN 337
Query: 350 ---RSSLA-FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+ +LA F LQL + + E L S +++ A+ G I L + I R
Sbjct: 338 GKPKEALAIFNELQLSKIA-----KPDEVTLVSTLSACAQLGAID--LGGWIHVYIKREG 390
Query: 406 VPANI-----IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
+ N + +Y + G + +++ +E D+ W+ +IA +G K ++LF
Sbjct: 391 IVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFF 450
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNML 513
M+ A++ P++ TF ++L ACS + G ++G++ + + + C +
Sbjct: 451 EMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMK-----HYAC--M 503
Query: 514 IDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISALGLN 551
+D+ G+ G + ++++ NEM T + W AL+ A L+
Sbjct: 504 VDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLH 542
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 128/550 (23%), Positives = 242/550 (44%), Gaps = 88/550 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLLSCDSLNPVEGA 59
+P N+ ++N++I AY+ + +FL ++++ + P +FTF ++ S
Sbjct: 85 IPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAAS------- 137
Query: 60 QLQASVLKNGL--------FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNS 111
+L+AS + + F D ++ +L+ YG G L +F+ + K +V+WNS
Sbjct: 138 ELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNS 197
Query: 112 IVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG 171
++S F + ED + LF ++ R V + VGV+ + + DLEFG + + + G
Sbjct: 198 MISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKG 257
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
+L + N++++MY +C + A+K+F ++ RDV SW ++ A+ ++ A ++
Sbjct: 258 IKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFN 317
Query: 232 RMSV--------------------------------DIVFPNQTTFVYVINSCAGLQNSI 259
M V I P++ T V +++CA L
Sbjct: 318 AMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAID 377
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
LG IH + + + + + S+LVD YAKC +LE A F + +++ W+A+I G
Sbjct: 378 LGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLG 437
Query: 320 SKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS 378
+I L E+ + +PN TF++VL
Sbjct: 438 MHGRGKAAIDLFFEMQEAKVKPNSVTFTNVL----------------------------- 468
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-R 433
+ + +GL+ + F + VVP + I R G E ++L++++
Sbjct: 469 --CACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTT 526
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC-SKLCNLALGSS 492
P W ++ AC+ + + E+ EL + ++ P N+ + LLS +K S
Sbjct: 527 PSASVWGALLGACSLHMNV-ELGELASD-QLLKLEPRNHGAIVLLSNIYAKTGRWEKVSE 584
Query: 493 LHGLIKKTEI 502
L L++ TE+
Sbjct: 585 LRKLMRDTEL 594
>gi|356509887|ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Glycine max]
Length = 750
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 185/677 (27%), Positives = 311/677 (45%), Gaps = 60/677 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCD---SLNPVE 57
+P ++ +NS + + L +F +M P FT ++S +L P
Sbjct: 66 LPSKDTFLYNSFLKSLFSRSLFPRVLSLFSHMRASNLSPNHFTLPIVVSAAAHLTLLP-H 124
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
GA L A K GLF + A + + LY R G ++ VF+++P++ +V W +++
Sbjct: 125 GASLHALASKTGLFHSSA----SFVSLYSRCGRMELARKVFDEIPKRDVVAWTALIIGHV 180
Query: 118 KHGFVED---CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+G E C+ +V + ++ G N + G +HG+V+KNG
Sbjct: 181 HNGEPEKGLRCLRHVHGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKNGVAS 240
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ +S+++MY +C A + F +V +D++ W ++IG A G+ L L+ M
Sbjct: 241 --FIQSSVLDMYSKCGVPREAYRSFCEVIHKDLLCWTSVIGVYARIGMMGECLRLFREMQ 298
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ + P+ V++ + GK+ H +I+ D V +L+ Y K L
Sbjct: 299 ENEIRPDGVVVGCVLSGFGNSMDVFQGKAFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLS 358
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTS-IFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F + + WN ++ GY + L E+ LG + + S
Sbjct: 359 LAERIFP-LCQGSGDGWNFMVFGYGKVGENVKCVELFREMQWLGIHSETIGIASAIASCA 417
Query: 354 AFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ L HC +I+ F+ NI N
Sbjct: 418 QLGAVNLGRSIHCNVIK---------------------------GFLDGKNIS----VTN 446
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ +Y + G+ ++ + E D+VSWN +I++ H ++E + LF M P
Sbjct: 447 SLVEMYGKCGKMTFAWRIFNTSE-TDVVSWNTLISSHVHIKQHEEAVNLFSKMVREDQKP 505
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ T V +LSACS L +L G +H I ++ + + + LIDMY KCG + S +
Sbjct: 506 NTATLVVVLSACSHLASLEKGERVHCYINESG-FTLNLPLGTALIDMYAKCGQLQKSRMV 564
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F+ M +++VI W A+IS G+NG+A+ ALE F+ ME P+ + +++L+AC H GLV
Sbjct: 565 FDSMMEKDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGITFLSLLSACAHAGLV 624
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG +F RM +SY V P + HY C+VDLL RYG+++EAE ++ +MP P+ +W L
Sbjct: 625 EEGKYMFARM-KSYSVNPNLKHYTCMVDLLGRYGNVQEAEAMVLSMPISPDGGVWGALLG 683
Query: 650 GCQR-------CRIAKY 659
C+ RIAKY
Sbjct: 684 HCKTHNQIEMGIRIAKY 700
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 136/563 (24%), Positives = 245/563 (43%), Gaps = 49/563 (8%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
++F +P K +NS + + LF + S ++ + V+ ++
Sbjct: 61 TLFHSLPSKDTFLYNSFLKSLFSRSLFPRVLSLFSHMRASNLSPNHFTLPIVVSAAAHLT 120
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNT-II 214
L G +H L K G + + S V++Y +C + A K+F ++ RDVV+W II
Sbjct: 121 LLPHGASLHALASKTGLFHS---SASFVSLYSRCGRMELARKVFDEIPKRDVVAWTALII 177
Query: 215 GAL--AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
G + E E + L + D PN T+ +C L G +H V+KN
Sbjct: 178 GHVHNGEPEKGLRCLRHVHGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKNG 237
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE 332
+ F+ S+++D Y+KC A+ F E+ +K+++ W ++I YA L
Sbjct: 238 VAS--FIQSSVLDMYSKCGVPREAYRSFCEVIHKDLLCWTSVIGVYARIGMMGECLRLFR 295
Query: 333 LLQLG-YRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
+Q RP+ VL S FQ H +IIR Y + E V SL+ Y K G
Sbjct: 296 EMQENEIRPDGVVVGCVLSGFGNSMDVFQGKAFHGVIIRRYYVDDEKVNDSLLFMYCKFG 355
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
++S + + P + +G WN ++
Sbjct: 356 MLS----------LAERIFP------LCQGSGD-----------------GWNFMVFGYG 382
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
G+ + +ELF+ M+ I+ + S +++C++L + LG S+H + K + +
Sbjct: 383 KVGENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVIKGFLDGKNI 442
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
V N L++MYGKCG + + +IFN ++ +V++W LIS+ + A+ F +M
Sbjct: 443 SVTNSLVEMYGKCGKMTFAWRIFN-TSETDVVSWNTLISSHVHIKQHEEAVNLFSKMVRE 501
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
KP+ L+ VL+AC H + +G + +N S G + ++D+ + G L++
Sbjct: 502 DQKPNTATLVVVLSACSHLASLEKGERVHCYINES-GFTLNLPLGTALIDMYAKCGQLQK 560
Query: 628 AEKIITTMPFPPNALIWRTFLEG 650
+ + +M + + W + G
Sbjct: 561 SRMVFDSM-MEKDVICWNAMISG 582
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/476 (23%), Positives = 212/476 (44%), Gaps = 44/476 (9%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQL 61
++++ + S+I Y+R G + + LR+F M P G +LS +S++ +G
Sbjct: 269 KDLLCWTSVIGVYARIGMMGECLRLFREMQENEIRPDGVVVGCVLSGFGNSMDVFQGKAF 328
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+++ + D V +LL +Y + G L +F + + S WN +V +GK G
Sbjct: 329 HGVIIRR-YYVDDEKVNDSLLFMYCKFGMLSLAERIFP-LCQGSGDGWNFMVFGYGKVGE 386
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE-LLVAN 180
C+ LF E+ + I + + G IH VIK D + + V N
Sbjct: 387 NVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVIKGFLDGKNISVTN 446
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SLV MY +C + A ++F E DVVSWNT+I + + +A+ L+ +M + P
Sbjct: 447 SLVEMYGKCGKMTFAWRIFNTSET-DVVSWNTLISSHVHIKQHEEAVNLFSKMVREDQKP 505
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N T V V+++C+ L + G+ +H + ++ ++ +G+AL+D YAKC L+ + + F
Sbjct: 506 NTATLVVVLSACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMYAKCGQLQKSRMVF 565
Query: 301 SEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
+ K+++ WNA+I GY + +++ + + + PN TF
Sbjct: 566 DSMMEKDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGITFL------------- 612
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA---LAFVTALNIPRAVVPANIIAGIYN 416
SL+++ A +GL+ + A + + ++ + + +
Sbjct: 613 ------------------SLLSACAHAGLVEEGKYMFARMKSYSVNPNLKHYTCMVDLLG 654
Query: 417 RTGQYNET-VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
R G E +LS PD W ++ C + + + + KY A + P+N
Sbjct: 655 RYGNVQEAEAMVLSMPISPDGGVWGALLGHCKTHNQIEMGIRIAKY--AIDLEPEN 708
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 162/372 (43%), Gaps = 40/372 (10%)
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGA-HLCFSEISNKNIVSWNALILGYASKSS 323
HA + + ++F+ S L+ Y +N + F + +K+ +N+ + S+S
Sbjct: 27 HALTVTSGHSTNLFMASKLISLYDSLNNDPSSCSTLFHSLPSKDTFLYNSFLKSLFSRSL 86
Query: 324 -PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTS 382
P + L + PN FT V+ ++ LL SL
Sbjct: 87 FPRVLSLFSHMRASNLSPNHFTLPIVVSAAAHLTLLPHG---------------ASLHAL 131
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
+K+GL + +FV+ +Y+R G+ K+ ++ + D+V+W +
Sbjct: 132 ASKTGLFHSSASFVS----------------LYSRCGRMELARKVFDEIPKRDVVAWTAL 175
Query: 443 IAACAHNGDYKEVLELFKYMRAA---RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
I HNG+ ++ L +++ P+ T+ AC L ++ GS LHG++ K
Sbjct: 176 IIGHVHNGEPEKGLRCLRHVHGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVK 235
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+ S F+ + ++DMY KCG + + F E+ ++++ WT++I G L
Sbjct: 236 NGVAS---FIQSSVLDMYSKCGVPREAYRSFCEVIHKDLLCWTSVIGVYARIGMMGECLR 292
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
FREM+ +PD V + VL+ + V +G + R Y V+ E + ++ +
Sbjct: 293 LFREMQENEIRPDGVVVGCVLSGFGNSMDVFQGKAFHGVIIRRYYVDDEKVN-DSLLFMY 351
Query: 620 VRYGHLKEAEKI 631
++G L AE+I
Sbjct: 352 CKFGMLSLAERI 363
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 247/502 (49%), Gaps = 14/502 (2%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS----AEKMFKDVEIRDVVSWNTIIGA 216
++IH +I G + + LV F W +K+ + + SWN I
Sbjct: 71 KEIHAQMISTGLISDGFALSRLVA--FCAISEWRNLDYCDKILNNAANLNXFSWNMAIRG 128
Query: 217 LAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
ESEN A+ LY M P+ T+ + CAG S I VI+ +
Sbjct: 129 YVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDS 188
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELL 334
D+FV +A++ C L A F E +++VSWN++I GY F L ++
Sbjct: 189 DLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMG 248
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
+L P+E T V+ +S + L +LH I MG + +LM Y K I
Sbjct: 249 ELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIE 308
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
A + V ++ G Y + G V+L +++ D+V WN +I
Sbjct: 309 AAKILFENMTKKTVVSWTTMVIG-YAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAK 367
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
KE L LF M+A+ + PD T V+ LSACS+L L +G +H + K + + + +
Sbjct: 368 RSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNL-TMNVALG 426
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
L+DMY KCG+I ++++F EM RN +TWTA+I L L+G A+ F EM +G
Sbjct: 427 TALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLV 486
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
PD + I VL+AC HGGLV +G + F +M YG+ P++ HY C+VDLL R G L+EAE+
Sbjct: 487 PDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEE 546
Query: 631 IITTMPFPPNALIWRTFLEGCQ 652
+I +MPF P+A++W G +
Sbjct: 547 LIRSMPFEPDAVVWGALFFGSR 568
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 140/622 (22%), Positives = 270/622 (43%), Gaps = 66/622 (10%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGL--YGRHGCLDEVVSVFEDMPRK 104
L +C S+ ++ ++ A ++ GL +D F + L+ LD + +
Sbjct: 61 LEACTSMAKMK--EIHAQMISTGLI-SDGFALSRLVAFCAISEWRNLDYCDKILNNAANL 117
Query: 105 SLVTWNSIVSIFGKHGFVE-----DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF 159
+ +WN + G+VE + + L+ ++R A+ ++ ++ + L +
Sbjct: 118 NXFSWNMAI-----RGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSW 172
Query: 160 -GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+I G VI+ GFD +L V N+++++ C + +A K+F + +RD+VSWN+II
Sbjct: 173 TANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYV 232
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+A +LY +M V P++ T + V+++ A L+N LG+ +H + + L V
Sbjct: 233 RCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVP 292
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-----------KSSPTSI 327
+ +AL+D Y KC N+E A + F ++ K +VSW +++GYA P
Sbjct: 293 LANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKD 352
Query: 328 FLLIELLQLGY----RPNE--FTFSHVLRSSLAF-QLLQLHCLII--RMGYENYEYVLGS 378
+L L G+ R E F + SS+A ++ ++CL ++G + +G
Sbjct: 353 VVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALD----VGI 408
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
M Y ++ +A TAL +Y + G + +++ ++ + ++
Sbjct: 409 WMHHYVDKHNLTMNVALGTAL------------VDMYAKCGNIKKAIQVFEEMPGRNSLT 456
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
W +I A +G + F M + + PD TF+ +LSAC + G +
Sbjct: 457 WTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMT 516
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FA 554
IS + L+D+ G+ G + + ++ M + + + W AL ++G
Sbjct: 517 SKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMG 576
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP-----EM 609
+RA K E++ P + +L + E +M GVE +
Sbjct: 577 ERAASKLLELD-----PHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSI 631
Query: 610 DHYHCVVDLLVRYGHLKEAEKI 631
+ V D ++R ++EKI
Sbjct: 632 EMNGLVYDFIIRDKSHPQSEKI 653
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 187/382 (48%), Gaps = 36/382 (9%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLLS-CDSLNPVEGA-QL 61
N S+N I Y +A+ ++ M+ +G P +T+ L C + A ++
Sbjct: 118 NXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEI 177
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V++ G F +D FV A++ + G L +F++ + LV+WNSI++ + + G
Sbjct: 178 LGHVIQLG-FDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGL 236
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ L+ ++ V E + +GV+ + ++L G ++H + + G + + +AN+
Sbjct: 237 ADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANA 296
Query: 182 LVNMYFQCAGI-----------------W--------------SAEKMFKDVEIRDVVSW 210
L++MY +C I W SA ++F ++ +DVV W
Sbjct: 297 LMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLW 356
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
N +IG +++ +AL L+ M V P++ T V +++C+ L +G +H V K
Sbjct: 357 NALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK 416
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFL 329
+ L +V +G+ALVD YAKC N++ A F E+ +N ++W A+I G A P +I
Sbjct: 417 HNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISY 476
Query: 330 LIELLQLGYRPNEFTFSHVLRS 351
E++ +G P+E TF VL +
Sbjct: 477 FSEMISIGLVPDEITFIGVLSA 498
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 157/350 (44%), Gaps = 38/350 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEGAQL 61
R++VS+NSII+ Y RCG ++A ++ M P + T G++S + N G +L
Sbjct: 219 RDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKL 278
Query: 62 QASVLKNGL----FCADAFVG--------------------------TALLGLYGRHGCL 91
S+ + GL A+A + T ++ Y + G L
Sbjct: 279 HQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLL 338
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
+ V +F +MP K +V WN+++ F + ++ + LF E+ S VA + + V +
Sbjct: 339 ESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSAC 398
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
S L+ G +H V K+ + + +LV+MY +C I A ++F+++ R+ ++W
Sbjct: 399 SQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWT 458
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC--AGLQNSILGKS-IHAKV 268
II LA A+ + M + P++ TF+ V+++C GL + G+ +
Sbjct: 459 AIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQ--GRDYFYQMT 516
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGA-HLCFSEISNKNIVSWNALILG 317
K + + S LVD + LE A L S + V W AL G
Sbjct: 517 SKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFG 566
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 108/220 (49%), Gaps = 11/220 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+++VV +N++I + + ++AL +F M P + T LS C L ++ G
Sbjct: 348 MPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVG 407
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V K+ L + +GTAL+ +Y + G + + + VFE+MP ++ +TW +I+
Sbjct: 408 IWMHHYVDKHNL-TMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLAL 466
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVI----HGLSNEQDLEFGEQIHGLVIKNGFDY 174
HG + F E++ + E +F+GV+ HG +Q ++ Q + K G
Sbjct: 467 HGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQ---MTSKYGISP 523
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTI 213
+L + LV++ + + AE++ + + D V W +
Sbjct: 524 KLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGAL 563
>gi|357508205|ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499406|gb|AES80609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 709
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/524 (29%), Positives = 254/524 (48%), Gaps = 44/524 (8%)
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
+A E ++ ++ + + + G IH IK + L + N L+NMY +C + SA
Sbjct: 1 MAKREELYINLLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSAL 60
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD-IVFPNQTTFVYVINSCAGL 255
++F ++ R+VVSW++++ + AL L+ M + V PN+ TFV + +C+
Sbjct: 61 QLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLS 120
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
+N I++ V+++ LEC+VF+ +A + + L A F ++ V+WN ++
Sbjct: 121 ENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMM 180
Query: 316 LGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLR-----SSLAFQLLQLHCLIIRMGYE 370
GY SS + + G +P+EFTF+ L SSL + Q+H ++R GY
Sbjct: 181 GGYLEFSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGM-QVHAQLVRSGYG 239
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ + N + +Y + + E K +
Sbjct: 240 D--------------------------------DICVGNSLVDMYLKNQKLEEGFKAFDE 267
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+ D+ SW + C G+ + L + M+ + P+ +T + L+AC+ L ++ G
Sbjct: 268 IPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEG 327
Query: 491 SSLHGLIKKTEIISSDTFVC--NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
HGL K + SD VC N L+DMY KCG + S+ +F R+V++WT +I A
Sbjct: 328 KQFHGLRIK---LGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMAC 384
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
NG AL+ F EM+ +P+ + I VL AC GG V EG + M++ YG+ P
Sbjct: 385 AQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPG 444
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
DHY C+V +L R G +KEA+++I MPF P +W+T L CQ
Sbjct: 445 EDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLSACQ 488
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 218/461 (47%), Gaps = 44/461 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGF-EPTQFTFGGLLSCDSL--NPVE 57
MP+RNVVS++S+++ G DAL +F M GF +P +FTF L SL N +
Sbjct: 66 MPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQ 125
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ + V+++GL C + F+ A L R+G L E + +FE P + VTWN+++ G
Sbjct: 126 AYQIYSLVVRSGLEC-NVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMG--G 182
Query: 118 KHGFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
F + + +F + E V E +F + GL+ L+ G Q+H ++++G+ ++
Sbjct: 183 YLEFSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDI 242
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V NSLV+MY + + K F ++ +DV SW + + AL + +M
Sbjct: 243 CVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKM 302
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN+ T +N+CA L + GK H IK + DV V +AL+D YAKC ++ A
Sbjct: 303 GVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSA 362
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F +++++VSW +I+ A P ++ + E+ + PN TF VL +
Sbjct: 363 WTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYAC--- 419
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN----II 411
++ G + + ++++++ ++P +
Sbjct: 420 ----------------------------SQGGFVDEGWKYLSSMDKDYGIIPGEDHYICM 451
Query: 412 AGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
I R G E +L+ ++ P + W +++AC +GD
Sbjct: 452 VSILGRAGLIKEAKELILRMPFHPGVRVWQTLLSACQIHGD 492
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/509 (24%), Positives = 241/509 (47%), Gaps = 47/509 (9%)
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
N ++G + A +K G F+ LL +Y + L + +F++MP +++V+W+S++
Sbjct: 20 NFLKGTAIHAYFIK-GHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMPERNVVSWSSVM 78
Query: 114 SIFGKHGFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+ +G D + LF + R V E +FV + S +++ QI+ LV+++G
Sbjct: 79 TGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQIYSLVVRSGL 138
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ + + N+ + + + A ++F+ IRD V+WNT++G E + + + ++ R
Sbjct: 139 ECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLEFSS--EQIPVFWR 196
Query: 233 -MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
M+ + V P++ TF + A + + +G +HA+++++ D+ VG++LVD Y K
Sbjct: 197 YMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQ 256
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLR 350
LE F EI +K++ SW + G P ++ ++ ++ ++G +PN+FT + L
Sbjct: 257 KLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALN 316
Query: 351 SSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+ + Q H L I++G + V +L+ YAK G + A + N
Sbjct: 317 ACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTN------ 370
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
+VSW +I ACA NG E L++F M+
Sbjct: 371 --------------------------SRSVVSWTTMIMACAQNGQPGEALQIFDEMKETS 404
Query: 467 IYPDNYTFVSLLSACSKLCNLALG-SSLHGLIKKTEII-SSDTFVCNMLIDMYGKCGSIG 524
+ P+ TF+ +L ACS+ + G L + K II D ++C ++ + G+ G I
Sbjct: 405 VEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYIC--MVSILGRAGLIK 462
Query: 525 SSVKIFNEMT-DRNVITWTALISALGLNG 552
+ ++ M V W L+SA ++G
Sbjct: 463 EAKELILRMPFHPGVRVWQTLLSACQIHG 491
>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 173/617 (28%), Positives = 288/617 (46%), Gaps = 52/617 (8%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L +C +L + L A +L +GL A T LL Y G L V ++ PR
Sbjct: 30 LPACATLPSLRA--LHARLLAHGLLRA-LRARTKLLSCYAALGDLASARRVLDETPRPDP 86
Query: 107 VTWNSIVSIFGKHGFVEDCMFLF------CELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
T+ + G D + L C +V L + + D +G
Sbjct: 87 YTYRVALGWHAAAGRHADALALHRGMRRRCPEAHDDVVLLSLALKASV----RSADFRYG 142
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
++H +K G + V N LV+MY + + +A K+F + R+VVSW +++ ++
Sbjct: 143 RRLHCNAVKAG-GADGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQN 201
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
+ L L+ M + V P++ T V+ +C L + G+ +H VIK+ + + F+
Sbjct: 202 GFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFIT 261
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-R 339
+A++D Y KC +E A F E+ ++V W +I+GY SP LL + +
Sbjct: 262 AAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIV 321
Query: 340 PNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
PN T + VL +S + L L H + +++ + V+ +L+ YAK +S+A
Sbjct: 322 PNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEA--- 378
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
GI+ R + D+V+WN +IA N E
Sbjct: 379 ----------------NGIFGR-------------ISNKDVVTWNSLIAGYVENDMGNEA 409
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
L LF MR PD + V+ LSAC L +L +G H K +S + +V L++
Sbjct: 410 LMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLS-NVYVNTALLN 468
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
+Y KC + S+ ++F+EM++RN +TW A+I G+ G + +++ +M +P+ V
Sbjct: 469 LYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVV 528
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
++L+ C H G+V G F+ M + + + P M HY C+VD+L R G+L+EA + I M
Sbjct: 529 FTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALEFIQKM 588
Query: 636 PFPPNALIWRTFLEGCQ 652
P P + IW FL GC+
Sbjct: 589 PMPADISIWGAFLHGCK 605
>gi|357517181|ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522901|gb|AET03355.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 633
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 169/539 (31%), Positives = 274/539 (50%), Gaps = 35/539 (6%)
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY---FQCAGIWSAEKMFKDVEIRDV 207
LS+ + ++ QI+ +I G L ++ +L Y + + +F + D+
Sbjct: 21 LSSCKTMQQAHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSHTLFTQITNPDI 80
Query: 208 VSWNTIIGALAESENFGK-ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI--LGKSI 264
WN II A ++ + + L+ M V P+ TF +++ +CA + S G +
Sbjct: 81 FLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVLISAPQFGFQV 140
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
H V++N DVFV +AL++FY ++ A+ F E ++ VS+N +I G+A K
Sbjct: 141 HCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDV 200
Query: 325 TSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIR-MG-YENYEYVLG 377
+ F + E+ + RP+E+TF +L + Q+H L+ R +G + ++
Sbjct: 201 SGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVN 260
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPA-NIIAGIYNRTGQYNETVKLLSQLERPDI 436
L+ YAK G + A ++ + ++VV A + Y G+ +L Q+ D+
Sbjct: 261 KLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDV 320
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
VSW +I+ +H G ++E LELF + + PD V+ LSAC++L L LG +H
Sbjct: 321 VSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIH-- 378
Query: 497 IKKTEIISSDTFVCNM-------LIDMYGKCGSIGSSVKIFNEMTDRNVIT--WTALISA 547
+ + + C++ ++DMY KCGSI ++ +F + +D T + ++IS
Sbjct: 379 ----RQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISG 434
Query: 548 LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
L +G + A F EM LG KPD + +AVL+AC H GLV G +LFE M YGV P
Sbjct: 435 LAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSP 494
Query: 608 EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ------RCRIAKYD 660
EM+HY C+VDLL R GHL EA ++I MPF NA+IWR L C+ R+A Y+
Sbjct: 495 EMEHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVHGDVALARVASYE 553
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 225/496 (45%), Gaps = 76/496 (15%)
Query: 2 PDRNVVSFNSIISAYSRC-GYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSL---NPV 56
PD + +N+II AYS+ + +F M+N P FTF LL +C ++ P
Sbjct: 78 PD--IFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVLISAPQ 135
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G Q+ VL+NG F +D FV ALL Y G + VF++ + V++N++++ F
Sbjct: 136 FGFQVHCHVLRNG-FGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGF 194
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK--NGFDY 174
+ G V C +F E+ V E +FV ++ G S +D G Q+HGLV + F
Sbjct: 195 ARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGG 254
Query: 175 ELLVANSLVNMYFQCAGI-------------------WS--------------AEKMFKD 201
+L+ N LV+MY +C + W+ A ++F
Sbjct: 255 NVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQ 314
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILG 261
+ RDVVSW +I + + F +ALEL++++ + P++ V +++CA L LG
Sbjct: 315 MGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELG 374
Query: 262 KSIHAKVIKNALECDVFVG--SALVDFYAKCDNLEGAHLCFSEISN--KNIVSWNALILG 317
+ IH + C + G SA+VD YAKC +++ A F + S+ K +N++I G
Sbjct: 375 RRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISG 434
Query: 318 YASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
A + L E+ LG +P+ TF VL + HC ++ G + +E
Sbjct: 435 LAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSAC-------GHCGLVDFGKKLFE--- 484
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPD 435
S+ T Y S + V L R G +E +L+ ++ + +
Sbjct: 485 -SMFTVYGVSPEMEHYGCMVDLL----------------GRAGHLDEAHRLILKMPFKAN 527
Query: 436 IVSWNIVIAACAHNGD 451
V W +++AC +GD
Sbjct: 528 AVIWRALLSACKVHGD 543
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 103/223 (46%), Gaps = 7/223 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M +R+VVS+ ++IS YS G ++AL +F+ + G +P + LS C L +E G
Sbjct: 315 MGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELG 374
Query: 59 AQLQASVLKNGLFCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMP--RKSLVTWNSIVSI 115
++ C+ + +A++ +Y + G +D + VF +K+ +NSI+S
Sbjct: 375 RRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISG 434
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI-HGLVIKNGFDY 174
HG E LF E+ + +FV V+ + ++FG+++ + G
Sbjct: 435 LAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSP 494
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
E+ +V++ + + A ++ + + + V W ++ A
Sbjct: 495 EMEHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSA 537
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/470 (31%), Positives = 235/470 (50%), Gaps = 20/470 (4%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A +F VE + WNT+I + A ++ M V + +FV+ + +C
Sbjct: 210 AHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQ 269
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
+ G+S++ V K +C++ V + L+ FYA+ L+ A F E S+K++V+W +
Sbjct: 270 FETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTM 329
Query: 315 ILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE 373
I GYA+ + EL+ L + PNE T V+ + L+ MG +E
Sbjct: 330 IDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLE-------MGKRVHE 382
Query: 374 YV-----------LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
V +L+ Y K + DA + +++ G Y + G
Sbjct: 383 KVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNG-YAKCGDLE 441
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
+ Q R + V W+ +IA + N KE L+LF M + P +T VS+LSAC
Sbjct: 442 SARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACG 501
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
+L L LG +H +II + N ++DMY KCGSI ++ ++F+ M +RN+I+W
Sbjct: 502 QLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWN 561
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
+I+ NG A++A+ F +M +GF+P+ + +++LTAC HGGL+ EG E F+ M R
Sbjct: 562 TMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERK 621
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
YG++PE HY C+VDLL R G L+EA K+I MP P W L C+
Sbjct: 622 YGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACR 671
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 142/567 (25%), Positives = 253/567 (44%), Gaps = 67/567 (11%)
Query: 49 SCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGL--YGRHGCLDEVVSVFEDMPRKSL 106
SC ++ ++ Q+QA + G+ AF + ++ G L ++F + + +
Sbjct: 166 SCSTMRQLK--QIQARMTLTGII-THAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNT 222
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
WN+++ + F + + V + SFV + + + GE ++ +
Sbjct: 223 FMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCV 282
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
V K GFD ELLV N L++ Y + + +A ++F + +DVV+W T+I A + +A
Sbjct: 283 VWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEA 342
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
+E++ M + V PN+ T + V+++C+ + N +GK +H KV + + C + + +AL+D
Sbjct: 343 MEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDM 402
Query: 287 YAKCD-------------------------------NLEGAHLCFSEISNKNIVSWNALI 315
Y KCD +LE A F + KN V W+A+I
Sbjct: 403 YVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMI 462
Query: 316 LGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEY 374
GY+ + P S+ L E+++ G P E T VL + QL CL
Sbjct: 463 AGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSAC-----GQLTCL----------- 506
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
LG + Y FV IP +V N I +Y + G + ++ S +
Sbjct: 507 NLGDWIHQY-----------FVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPER 555
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
+++SWN +IA A NG K+ + +F MR P+N TFVSLL+ACS ++ G
Sbjct: 556 NLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYF 615
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV-ITWTALISALGLNGF 553
+++ I + ++D+ G+ G + + K+ M + W AL++A ++G
Sbjct: 616 DNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGN 675
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVL 580
+ L + L P+ + +L
Sbjct: 676 VE--LARLSAHNLLRLDPEDSGIYVLL 700
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 134/284 (47%), Gaps = 33/284 (11%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
D++VV++ ++I Y+ E+A+ +F M+ EP + T ++S C + +E G +
Sbjct: 320 DKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKR 379
Query: 61 LQASVLKNGLFCA------------------------------DAFVGTALLGLYGRHGC 90
+ V + + C+ D + T+++ Y + G
Sbjct: 380 VHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGD 439
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG 150
L+ F+ PRK+ V W+++++ + ++ ++ + LF E++ V E + V V+
Sbjct: 440 LESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSA 499
Query: 151 LSNEQDLEFGEQIHG-LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
L G+ IH V+ + + N++V+MY +C I +A ++F + R+++S
Sbjct: 500 CGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLIS 559
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
WNT+I A + +A+ ++ +M PN TFV ++ +C+
Sbjct: 560 WNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACS 603
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GA 59
P +N V ++++I+ YS+ +++L++F M+ RG P + T +LS C L + G
Sbjct: 451 PRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGD 510
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + + + A++ +Y + G +D VF MP ++L++WN++++ + +
Sbjct: 511 WIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAAN 570
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
G + + +F ++ +FV ++ S HG +I G +Y
Sbjct: 571 GRAKQAINVFDQMRNMGFEPNNITFVSLLTACS-----------HGGLISEGREY 614
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
MP+RN++S+N++I+ Y+ G + A+ +F M N GFEP TF LL+ S + EG
Sbjct: 552 MPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEG 611
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL-VTWNSIVSIFG 117
+ ++ + + ++ L GR G L+E + +MP + W ++++
Sbjct: 612 REYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACR 671
Query: 118 KHGFVE 123
HG VE
Sbjct: 672 MHGNVE 677
>gi|255561305|ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539054|gb|EEF40650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 578
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 162/538 (30%), Positives = 274/538 (50%), Gaps = 36/538 (6%)
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + + EL S++ VI S FG Q++ +V+K+G D + ++
Sbjct: 5 GLNHQILKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDFVIC 64
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
NS ++ Y + + SA K+F + ++D +SWN II ++ F + ++ M +
Sbjct: 65 NSFISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIV 124
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKV-IKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P V++ C L + LG++IHA V I + ++FV ++LVD+Y K + A
Sbjct: 125 PKPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALR 184
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F +I KN+VSW AL+ G ++ +Q+ G RPN T +L +
Sbjct: 185 VFDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPA-----F 239
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+L C AK+G AF ++ + + I IY R
Sbjct: 240 AELGC---------------------AKTGKEIHGYAFRHGFDLDHHFLSSLI--HIYCR 276
Query: 418 TGQYNETVKLLSQLER---PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+ + + KL ER D+V W+ +I + + D E L+LF++MRA P++ T
Sbjct: 277 SREGLQLAKL--TFERSNVKDVVMWSSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTL 334
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+++++AC+ L +L G HG I K + + DT++ N LI+MY KCG + +S +IF EM
Sbjct: 335 LAVITACTTLTSLKNGYGTHGYIVKCGL-NFDTYIGNALINMYSKCGCVVASHQIFKEMH 393
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
++ ++W+ LI+A GL+G + AL F EM+ G +PD + +AVL+AC H GLV+EG +
Sbjct: 394 IKDSVSWSTLITAYGLHGHGKEALCLFHEMQLQGVEPDAMTFLAVLSACNHSGLVKEGQQ 453
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+F+ + + V ++HY C+VDLL + G + +A I+ MP P+ IW + + C+
Sbjct: 454 IFDNVKKDGKVSLTVEHYACLVDLLGKSGKVDDAFDILRAMPMKPSTTIWSSLVSACK 511
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/524 (25%), Positives = 244/524 (46%), Gaps = 39/524 (7%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G QL + VLK+GL +D + + + Y + C + + VF+ MP K ++WN I++ +
Sbjct: 45 GIQLYSIVLKSGLD-SDFVICNSFISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYF 103
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYEL 176
++G+ +F E+ + V+ D++ G IH LV+ +G E+
Sbjct: 104 QNGYFTQGFIMFKEMYECGIVPKPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEI 163
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V SLV+ YF+ A ++F +E+++VVSW ++ + + ++ AL+ + M ++
Sbjct: 164 FVLTSLVDWYFKSGDSLMALRVFDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQIN 223
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC-DNLEG 295
V PN+ T + ++ + A L + GK IH ++ + D S+L+ Y + + L+
Sbjct: 224 GVRPNRVTLIAILPAFAELGCAKTGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQL 283
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
A L F + K++V W+++I Y + L ++ G PN T V+ +
Sbjct: 284 AKLTFERSNVKDVVMWSSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTT 343
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
L + GY + Y++ K GL D N + +
Sbjct: 344 LTSL-------KNGYGTHGYIV--------KCGLNFDTYI-------------GNALINM 375
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y++ G + ++ ++ D VSW+ +I A +G KE L LF M+ + PD TF
Sbjct: 376 YSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGLHGHGKEALCLFHEMQLQGVEPDAMTF 435
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIIS--SDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+++LSAC+ + G + +KK +S + + C L+D+ GK G + + I
Sbjct: 436 LAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVEHYAC--LVDLLGKSGKVDDAFDILRA 493
Query: 533 MTDRNVIT-WTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
M + T W++L+SA ++G + A E+ + E + +P A
Sbjct: 494 MPMKPSTTIWSSLVSACKIHGRLEIA-ERLAQ-ELIKSEPSNAA 535
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 228/484 (47%), Gaps = 30/484 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP ++ +S+N II+ Y + GY MF M G P ++S C L ++ G
Sbjct: 87 MPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKPELVASVVSVCVRLGDMKLG 146
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A VL +G + FV T+L+ Y + G + VF+ + K++V+W ++VS G
Sbjct: 147 RAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFDQIEVKNVVSWTALVS--GC 204
Query: 119 HGFVEDCMFLFC--ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ M L C + + V + + ++ + + G++IHG ++GFD +
Sbjct: 205 SANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAELGCAKTGKEIHGYAFRHGFDLDH 264
Query: 177 LVANSLVNMYFQC-AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+SL+++Y + G+ A+ F+ ++DVV W++IIG+ S + +AL+L+ M
Sbjct: 265 HFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSIIGSYCRSADSIEALKLFRWMRA 324
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D PN T + VI +C L + G H ++K L D ++G+AL++ Y+KC +
Sbjct: 325 DGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTYIGNALINMYSKCGCVVA 384
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
+H F E+ K+ VSW+ LI Y L +QL G P+ TF VL +
Sbjct: 385 SHQIFKEMHIKDSVSWSTLITAYGLHGHGKEALCLFHEMQLQGVEPDAMTFLAVLSAC-- 442
Query: 355 FQLLQLHCLIIRMGYENYEYV------------LGSLMTSYAKSGLISDALAFVTALNI- 401
H +++ G + ++ V L+ KSG + DA + A+ +
Sbjct: 443 -----NHSGLVKEGQQIFDNVKKDGKVSLTVEHYACLVDLLGKSGKVDDAFDILRAMPMK 497
Query: 402 PRAVVPANIIAG--IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
P + +++++ I+ R + L + E + + ++ A +G++ V ++
Sbjct: 498 PSTTIWSSLVSACKIHGRLEIAERLAQELIKSEPSNAANHTLLSMIYAESGNWFAVEDVR 557
Query: 460 KYMR 463
+ MR
Sbjct: 558 RLMR 561
>gi|15231572|ref|NP_189286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273843|sp|Q9LRV2.1|PP256_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g26540
gi|9293933|dbj|BAB01836.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643655|gb|AEE77176.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 700
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 159/583 (27%), Positives = 280/583 (48%), Gaps = 15/583 (2%)
Query: 85 YGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
YG+ GC+D+ +FE+MP + +WN++++ ++G ++ +F + R V TE+SF
Sbjct: 106 YGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSF 165
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
GV+ DL Q+H V+K G+ + + S+V++Y +C + A ++F ++
Sbjct: 166 AGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVN 225
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
VSWN I+ E +A+ ++ +M V P T V+ +C+ +GK I
Sbjct: 226 PSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVI 285
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
HA +K ++ D V +++ D Y KCD LE A F + +K++ SW + + GYA
Sbjct: 286 HAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT 345
Query: 325 TSIFLLIELLQ----LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV----L 376
L +L+ + + + H A L L +R EN + V +
Sbjct: 346 REARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTL----MRQEIENIDNVTLVWI 401
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL-ERPD 435
++ + + + A F+ V+ AN + +Y + G Q+ E D
Sbjct: 402 LNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRD 461
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
VSWN ++ A G ++ L F+ M+ P YT +LL+ C+ + L LG ++HG
Sbjct: 462 EVSWNALLTGVARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHG 520
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
+ + + D + ++DMY KC ++++F E R++I W ++I NG ++
Sbjct: 521 FLIR-DGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSK 579
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
E F +E G KPD V + +L AC G V G + F M+ Y + P+++HY C+
Sbjct: 580 EVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCM 639
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAK 658
++L +YG L + E+ + MPF P + + CQR R +K
Sbjct: 640 IELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSK 682
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 138/561 (24%), Positives = 264/561 (47%), Gaps = 71/561 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEG- 58
MP+R+ S+N++I+A ++ G ++ RMF M G T+ +F G+L SC + +
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLL 181
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL +V+K G + + + T+++ +YG+ + + VF+++ S V+WN IV + +
Sbjct: 182 RQLHCAVVKYG-YSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLE 240
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
GF ++ + +F +++ V + V+ S LE G+ IH + +K + +V
Sbjct: 241 MGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVV 300
Query: 179 ANSLVNMYFQCAGIWSAEKMF-----KDVEI--------------------------RDV 207
+ S+ +MY +C + SA ++F KD++ R++
Sbjct: 301 STSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNI 360
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
VSWN ++G + + +AL+ M +I + T V+++N C+G+ + +GK H
Sbjct: 361 VSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGF 420
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN-KNIVSWNALILGYASKSSPTS 326
+ ++ + +V V +AL+D Y KC L+ A++ F ++S ++ VSWNAL+ G A
Sbjct: 421 IYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQ 480
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTS 382
E +Q+ +P+++T + +L L L H +IR GY+ + G+++
Sbjct: 481 ALSFFEGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDM 540
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
Y+K ++ +++ + D++ WN +
Sbjct: 541 YSKCRC--------------------------------FDYAIEVFKEAATRDLILWNSI 568
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
I C NG KEV ELF + + PD+ TF+ +L AC + ++ LG +
Sbjct: 569 IRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYH 628
Query: 503 ISSDTFVCNMLIDMYGKCGSI 523
IS + +I++Y K G +
Sbjct: 629 ISPQVEHYDCMIELYCKYGCL 649
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 214/437 (48%), Gaps = 20/437 (4%)
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ + N + Y +C + A ++F+++ RD SWN +I A A++ + ++ RM+
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D V +T+F V+ SC + + L + +H V+K +V + +++VD Y KC +
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD 215
Query: 296 AHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS--- 351
A F EI N + VSWN ++ Y + ++ + ++L+L RP T S V+ +
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR 275
Query: 352 SLAFQLLQ-LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
SLA ++ + +H + +++ V S+ Y K + A +
Sbjct: 276 SLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSA 335
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
++G Y +G E +L + +IVSWN ++ H ++ E L+ MR D
Sbjct: 336 MSG-YAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENID 394
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
N T V +L+ CS + ++ +G HG I + ++ V N L+DMYGKCG++ S+ F
Sbjct: 395 NVTLVWILNVCSGISDVQMGKQAHGFIYR-HGYDTNVIVANALLDMYGKCGTLQSANIWF 453
Query: 531 NEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR----- 584
+M++ R+ ++W AL++ + G +++AL F M+ + KP + L +L C
Sbjct: 454 RQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANIPAL 512
Query: 585 ------HGGLVREGMEL 595
HG L+R+G ++
Sbjct: 513 NLGKAIHGFLIRDGYKI 529
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 169/380 (44%), Gaps = 51/380 (13%)
Query: 234 SVDIVFPNQTTFVY-----VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
+V ++F + Y + SC+ + + + + ++ + +F+ + ++ Y
Sbjct: 48 AVSVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYG 107
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSH 347
KC ++ A F E+ ++ SWNA+I A +F + + + G R E +F+
Sbjct: 108 KCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAG 167
Query: 348 VLRSS---LAFQLL-QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
VL+S L +LL QLHC +++ GY + S++ Y K ++SDA
Sbjct: 168 VLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDAR---------- 217
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
++ ++ P VSWN+++ G E + +F M
Sbjct: 218 ----------------------RVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKML 255
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ P N+T S++ ACS+ L +G +H + K ++ +DT V + DMY KC +
Sbjct: 256 ELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVV-ADTVVSTSVFDMYVKCDRL 314
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR--VALIAVLT 581
S+ ++F++ +++ +WT+ +S ++G + A E F M P+R V+ A+L
Sbjct: 315 ESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLM------PERNIVSWNAMLG 368
Query: 582 ACRHGGLVREGMELFERMNR 601
H E ++ M +
Sbjct: 369 GYVHAHEWDEALDFLTLMRQ 388
>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 871
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 180/615 (29%), Positives = 291/615 (47%), Gaps = 61/615 (9%)
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
+P L AS++ +G T L+ LY G L ++F +P + ++ I+
Sbjct: 52 HPTTVKTLHASLIISG-----HPPDTTLISLYASFGFLRHARTLFHRLPSPTHHSFKLII 106
Query: 114 SIFGKHGFVEDC---MFLFCELVRSEVALTES--SFVGVIHGLSNEQDLEFGEQIHGLVI 168
+ F+ D + F L R+ + F ++ S +D+ ++H ++
Sbjct: 107 ----RWHFLNDVHSHVVSFYNLARTTLGSFNDLVVFSILLKTASQLRDIVLTTKLHCNIL 162
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
K+ + V SLV+ Y +C + A K+F ++ R VVSW ++I A ++E + L
Sbjct: 163 KSN-AADSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLM 221
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
L+ RM + N T ++ +C L GK +H VIKN +E + ++ ++L++ Y
Sbjct: 222 LFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYV 281
Query: 289 KCDNLEGAHLCFSEIS------NKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR--P 340
KC ++ A F E S ++V W A+I+GY + P + L + YR P
Sbjct: 282 KCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKW-YRILP 340
Query: 341 NEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
N T + +L + + + LH L+++ G ++ + SL+ YAK GLI DA +V
Sbjct: 341 NSVTLASLLSACAQLENIVMGKLLHVLVVKYGLDDTS-LRNSLVDMYAKCGLIPDA-HYV 398
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
A + + D+VSWN VI+ A +G E L
Sbjct: 399 FATTVDK-------------------------------DVVSWNSVISGYAQSGSAYEAL 427
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
+LF MR PD T V +LSAC+ + +G SLHG K ++SS +V L++
Sbjct: 428 DLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNF 487
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y KCG S+ +F+ M ++N +TW A+I G+ G +L FR+M P+ V
Sbjct: 488 YAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVF 547
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+L AC H G+V EG+ +F+ M + P M HY C+VDLL R G+L+EA I MP
Sbjct: 548 TTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMP 607
Query: 637 FPPNALIWRTFLEGC 651
P ++ FL GC
Sbjct: 608 VQPGVGVFGAFLHGC 622
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 242/484 (50%), Gaps = 29/484 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
+PDR+VVS+ S+I AY + E+ L +F M + FT G L++ C L + +G
Sbjct: 195 IPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQG 254
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS------LVTWNSI 112
+ V+KNG+ ++++ T+LL +Y + G + + SVF++ + LV W ++
Sbjct: 255 KWVHGYVIKNGIEI-NSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAM 313
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+ + + G+ + + LF + + + ++ + +++ G+ +H LV+K G
Sbjct: 314 IVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGL 373
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
D + + NSLV+MY +C I A +F +DVVSWN++I A+S + +AL+L+ R
Sbjct: 374 D-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNR 432
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL-ECDVFVGSALVDFYAKCD 291
M ++ P+ T V V+++CA + +G S+H +K L ++VG+AL++FYAKC
Sbjct: 433 MRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCG 492
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLR 350
+ A + F + KN V+W A+I G + S+ L ++L+ PNE F+ +L
Sbjct: 493 DATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLA 552
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYV-----LGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+ +++ +I + +V ++ A++G + +AL F+ + + V
Sbjct: 553 ACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGV 612
Query: 406 VPANIIAGIYNRTGQYNE----TVKLLSQLE-RPDIVSWNIVI----AACAHNGDYKEVL 456
+ + G ++ V + LE PD + ++I A+ G KEV
Sbjct: 613 ---GVFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQACYYVLISNLYASDGRWGMVKEVR 669
Query: 457 ELFK 460
E+ K
Sbjct: 670 EMIK 673
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 179/656 (27%), Positives = 313/656 (47%), Gaps = 77/656 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MPD +VVS+N+++S Y + G D + + + M G P + T LL +C L+ + G
Sbjct: 123 MPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALG 182
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A +K GL D G+AL+ +YG+ L++ + F M ++ V+W ++++
Sbjct: 183 VQIHALAVKTGLE-MDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIA---- 237
Query: 119 HGFVEDCMFLF-CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G V++ ++ EL+ A+T L Q+H IKN F + +
Sbjct: 238 -GCVQNEQYMRGLELLCRCKAIT---------------CLSTARQLHAHAIKNKFSSDRV 281
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V ++V++Y + + A + F + V + N ++ L + +A++L+ M+
Sbjct: 282 VGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSG 341
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ + V ++CA ++ + DV V +A++D Y KC L A+
Sbjct: 342 IGFGVVSLSGVFSACAEVKG---------------FDVDVCVRNAILDLYGKCKALVEAY 386
Query: 298 LCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
L F E+ ++ VSWN +I +I L E+L+ G ++FT+ VL++ Q
Sbjct: 387 LVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQ 446
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L EY L + KSGL DA T +++ Y
Sbjct: 447 SL--------------EYGL-VVHGKAIKSGLGLDAFVSSTVVDM-------------YC 478
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G E +KL ++ ++VSWN +IA + N +E + F M + PD++T+ +
Sbjct: 479 KCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYAT 538
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+L +C+ L + LG +HG I K E++ D F+ + L+DMY KCG++ S +F ++
Sbjct: 539 VLDSCANLATIELGKQIHGQIIKQEMLG-DEFISSTLVDMYAKCGNMPDSQLMFEKVQKL 597
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+ ++W A+I L+G ALE F + P+ +AVL AC H GL+ +G F
Sbjct: 598 DFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYF 657
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M Y +EP+++H+ C+ +EA K I +MP +A+IW+T L C+
Sbjct: 658 HLMTSRYKLEPQLEHFACMGP--------QEALKFIRSMPLEADAVIWKTLLSICK 705
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 154/602 (25%), Positives = 268/602 (44%), Gaps = 74/602 (12%)
Query: 32 MINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCL 91
M+ GF PT F LL + G A + + + D +L Y G
Sbjct: 57 MLVSGFVPTMFVSNCLLQ---MYARCGGAAHAHGVFDTMPHRDTVSWNTMLTAYAHMGDT 113
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
S+ MP +V+WN+++S + + G D + L E+ R VA ++ ++
Sbjct: 114 GMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKAC 173
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
DL G QIH L +K G + ++ ++LV+MY +C + A F + R+ VSW
Sbjct: 174 GGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWG 233
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
+I ++E + + LEL R C + + +HA IKN
Sbjct: 234 AVIAGCVQNEQYMRGLELLCR-------------------CKAITCLSTARQLHAHAIKN 274
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI 331
D VG+A+VD YAK D+L A F + N + + NA+++G L
Sbjct: 275 KFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTG------LGA 328
Query: 332 ELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
E +QL F + RS + F ++ L SG+ S
Sbjct: 329 EAMQL--------FQFMTRSGIGFGVVSL-------------------------SGVFS- 354
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
A A V ++ V N I +Y + E + ++E+ D VSWN +IAA N
Sbjct: 355 ACAEVKGFDVD--VCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNEC 412
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
Y++ + M + + D++T+ S+L AC+ L +L G +HG K+ + D FV +
Sbjct: 413 YEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSG-LGLDAFVSS 471
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
++DMY KCG I ++K+ + + + +++W ++I+ LN ++ A + F EM +G KP
Sbjct: 472 TVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKP 531
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM--DHY--HCVVDLLVRYGHLKE 627
D VL +C + + G ++ ++ ++ EM D + +VD+ + G++ +
Sbjct: 532 DHFTYATVLDSCANLATIELGKQIHGQI-----IKQEMLGDEFISSTLVDMYAKCGNMPD 586
Query: 628 AE 629
++
Sbjct: 587 SQ 588
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/522 (26%), Positives = 245/522 (46%), Gaps = 26/522 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
+P+ V + N+++ R G +A+++F +M G + G+ S + V+G
Sbjct: 306 LPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFS--ACAEVKG-- 361
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
F D V A+L LYG+ L E VF++M ++ V+WN+I++ ++
Sbjct: 362 ----------FDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNE 411
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
ED + E++RS + + ++ V+ + Q LE+G +HG IK+G + V++
Sbjct: 412 CYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSS 471
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
++V+MY +C I A K+ + +++VSWN+II + ++ +A + + M V P
Sbjct: 472 TVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKP 531
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T+ V++SCA L LGK IH ++IK + D F+ S LVD YAKC N+ + L F
Sbjct: 532 DHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMF 591
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQ 359
++ + VSWNA+I GYA + E Q PN TF VLR+ LL
Sbjct: 592 EKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLD 651
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
C + Y+ L + +A G +AL F+ ++ + V + I
Sbjct: 652 DGCRYFHLMTSRYK--LEPQLEHFACMG-PQEALKFIRSMPLEADAVIWKTLLSICKIRQ 708
Query: 420 QYNETVKLLSQLER--PDIVSWNIVIAAC-AHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
S + R PD S I+++ A +G + +V + MR R+ + S
Sbjct: 709 DVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKE--PGCS 766
Query: 477 LLSACSKLCNLALGSSLHGLIKKT-EIISSDTFVCNMLIDMY 517
+ S++ +G +H ++ E++ + +C M + Y
Sbjct: 767 WIEVQSEMHGFLVGEKVHPRSREVYEML--NNLICEMKLSGY 806
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 108/479 (22%), Positives = 187/479 (39%), Gaps = 101/479 (21%)
Query: 239 FPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
F TF +V CA +S L G++ HA+++ + +FV + L+ YA+C A
Sbjct: 26 FLATATFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHA 85
Query: 297 HLCFSEISNKNIVSWNALILGYASKSS---PTSIF------------------------- 328
H F + +++ VSWN ++ YA TS+
Sbjct: 86 HGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFR 145
Query: 329 ----LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLM 380
L IE+ + G P+ T + +L++ L Q+H L ++ G E +L+
Sbjct: 146 DLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALV 205
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
Y K + DAL F + +V +IAG QY ++LL + + +S
Sbjct: 206 DMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNE-QYMRGLELLCRCKAITCLSTA 264
Query: 441 IVIAACAHNGDYKE-------VLELFKYMRAARIYPDNYTFVSLLSACSKLCN------- 486
+ A A + ++++ Y +A + F L + + CN
Sbjct: 265 RQLHAHAIKNKFSSDRVVGTAIVDV--YAKADSLVDARRAFFGLPNHTVETCNAMMVGLV 322
Query: 487 -LALGS-------------------SLHGLIKK-TEIISSDTFVC--NMLIDMYGKCGSI 523
LG+ SL G+ E+ D VC N ++D+YGKC ++
Sbjct: 323 RTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDVDVCVRNAILDLYGKCKAL 382
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ +F EM R+ ++W +I+AL N + + EM G + D +VL AC
Sbjct: 383 VEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKAC 442
Query: 584 R-----------HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
HG ++ G+ L ++ + VVD+ + G + EA K+
Sbjct: 443 AGLQSLEYGLVVHGKAIKSGLGLDAFVSST------------VVDMYCKCGMITEALKL 489
>gi|224106429|ref|XP_002314162.1| predicted protein [Populus trichocarpa]
gi|222850570|gb|EEE88117.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 151/501 (30%), Positives = 258/501 (51%), Gaps = 40/501 (7%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
G Q H ++K GF + + +++V+MY +C I SA +F + R VV+WN++I
Sbjct: 85 FHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEISSARVLFDQMPQRTVVTWNSLIYG 144
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
A+EL+++M + + + + C+ L+ +G +H ++K L +
Sbjct: 145 YLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLEAREVGTQVHGLILKTGLGYN 204
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQ 335
V VG++LVD Y+KC +++ + L F + N+N+++W +++ GY+ P L+ E++
Sbjct: 205 VVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVTGYSQIEKPDEAMALVKEMVL 264
Query: 336 LGYRPNEFTFSHVLRS-----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
RPN T++ +L S L++ LQ+HC II++G E+ Y+ +L+T Y+K
Sbjct: 265 QDLRPNCVTYNSLLSSFSGPDCLSY-CLQVHCCIIQLGLESNVYIAATLVTVYSKC---- 319
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
+ + K+ S + D ++WN VIA + G
Sbjct: 320 ---------------------------SSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLG 352
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
++E L F M+ A I D+YT S++ A L G ++H LI +T IS V
Sbjct: 353 RHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYIS-HLNVQ 411
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
N L+ MY +CG+IG S ++F M + +VI+W AL++A +G+ + A+E F +M K
Sbjct: 412 NGLVSMYARCGAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIK 471
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP-EMDHYHCVVDLLVRYGHLKEAE 629
P+ +AVL AC H G V +G+E F+ M +EP +++HY +VD R G+L EAE
Sbjct: 472 PNSSTFLAVLCACSHVGFVDKGIEYFDTMKSDILLEPLKVEHYASLVDTFGRAGYLNEAE 531
Query: 630 KIITTMPFPPNALIWRTFLEG 650
I +MP P +++ L
Sbjct: 532 AFINSMPIVPAPSVYKALLSA 552
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 132/524 (25%), Positives = 260/524 (49%), Gaps = 56/524 (10%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q +++LK G F ++ ++ +A++ +Y + G + +F+ MP++++VTWNS++ +
Sbjct: 88 GIQAHSTILKLG-FISNVYICSAVVDMYAKCGEISSARVLFDQMPQRTVVTWNSLIYGYL 146
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + LF +++++ + ++ S + G S + E G Q+HGL++K G Y ++
Sbjct: 147 AVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLEAREVGTQVHGLILKTGLGYNVV 206
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V SLV+MY +C + + +F + R+V++W +++ ++ E +A+ L M +
Sbjct: 207 VGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVTGYSQIEKPDEAMALVKEMVLQD 266
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC-DNLEGA 296
+ PN T+ +++S +G +H +I+ LE +V++ + LV Y+KC +LE
Sbjct: 267 LRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLESNVYIAATLVTVYSKCSSSLEDF 326
Query: 297 HLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVL----RS 351
S + + ++WNA+I GY+ ++ E+ Q G + +T + V+ S
Sbjct: 327 KKVCSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNS 386
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
S + +H LI R GY ++ V L++ YA+ G I D
Sbjct: 387 SFLEEGKAMHALIHRTGYISHLNVQNGLVSMYARCGAIGD-------------------- 426
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+ ++ +E D++SWN ++ A AH+G +E +ELF+ MR I P++
Sbjct: 427 ------------SKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIKPNS 474
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM-------LIDMYGKCGSIG 524
TF+++L ACS + + G I+ + + SD + + L+D +G+ G +
Sbjct: 475 STFLAVLCACSHVGFVDKG------IEYFDTMKSDILLEPLKVEHYASLVDTFGRAGYLN 528
Query: 525 SSVKIFNEMTDRNVIT-WTALISALGLNG---FAQRALEKFREM 564
+ N M + + AL+SA ++G A R+ +K E+
Sbjct: 529 EAEAFINSMPIVPAPSVYKALLSASLVHGNREIAARSAKKLLEL 572
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 239/494 (48%), Gaps = 36/494 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R VV++NS+I Y + A+ +F+ M+ + F+ L+ C L E G
Sbjct: 130 MPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLEAREVG 189
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +LK GL + VGT+L+ +Y + G +D+ VF+ M ++++TW S+V+ + +
Sbjct: 190 TQVHGLILKTGLG-YNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVTGYSQ 248
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
++ M L E+V ++ ++ ++ S L + Q+H +I+ G + + +
Sbjct: 249 IEKPDEAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLESNVYI 308
Query: 179 ANSLVNMYFQC-AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS--- 234
A +LV +Y +C + + +K+ V D ++WN +I ++ +AL + M
Sbjct: 309 AATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHEMKQAG 368
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+DI T+ V I + + L+ GK++HA + + + V + LV YA+C +
Sbjct: 369 IDIDSYTLTSVVGAIGNSSFLEE---GKAMHALIHRTGYISHLNVQNGLVSMYARCGAIG 425
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL---- 349
+ F + +++SWNAL+ +A ++ L ++ + +PN TF VL
Sbjct: 426 DSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIKPNSSTFLAVLCACS 485
Query: 350 ------RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-P 402
+ F ++ L+ + E+Y SL+ ++ ++G +++A AF+ ++ I P
Sbjct: 486 HVGFVDKGIEYFDTMKSDILLEPLKVEHY----ASLVDTFGRAGYLNEAEAFINSMPIVP 541
Query: 403 -----RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
+A++ A+++ G NR KLL +L D ++ ++ + +G++ + +
Sbjct: 542 APSVYKALLSASLVHG--NREIAARSAKKLL-ELWPNDPATYVLLSSVLTVDGNWDDAAD 598
Query: 458 LFKYM--RAARIYP 469
L K M R R P
Sbjct: 599 LRKLMCDRGLRKKP 612
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 190/413 (46%), Gaps = 53/413 (12%)
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
+++ CA + LG H+ ++K +V++ SA+VD YAKC + A + F ++ +
Sbjct: 75 IVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEISSARVLFDQMPQRT 134
Query: 308 IVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL----LQLHC 362
+V+WN+LI GY + + P +I L I++L+ + F+ S L + Q+H
Sbjct: 135 VVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLEAREVGTQVHG 194
Query: 363 LIIRMGYENYEYVLG-SLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIAGIYNRTGQ 420
LI++ G Y V+G SL+ Y+K G + D+ L F +N N+I TG
Sbjct: 195 LILKTGL-GYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVN-------RNVITWTSMVTG- 245
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
SQ+E+PD E + L K M + P+ T+ SLLS+
Sbjct: 246 -------YSQIEKPD------------------EAMALVKEMVLQDLRPNCVTYNSLLSS 280
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE-----MTD 535
S L+ +H I + + S+ ++ L+ +Y KC SS++ F + MT
Sbjct: 281 FSGPDCLSYCLQVHCCIIQLG-LESNVYIAATLVTVYSKC---SSSLEDFKKVCSVVMTC 336
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
N I W A+I+ G + AL F EM+ G D L +V+ A + + EG +
Sbjct: 337 DN-IAWNAVIAGYSKLGRHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAM 395
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
++R+ G ++ + +V + R G + +++++ M + + W L
Sbjct: 396 HALIHRT-GYISHLNVQNGLVSMYARCGAIGDSKRVFWFME-EHDVISWNALL 446
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 155/517 (29%), Positives = 257/517 (49%), Gaps = 39/517 (7%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
+F ++ + DL G +H + G E + + +L NMYF+C A ++F +
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDI--VFPNQTTFVYVINSCAGLQNSIL 260
RD V+WN ++ A + A+E +RM + P+ T V V+ +CA +
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
+ +HA ++ L+ V V +A++D Y KC +E A F + +N VSWNA+I GYA
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197
Query: 321 KSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS--SLAF--QLLQLHCLIIRMGYENYEYV 375
+ T ++ L ++Q G + + L++ L + ++ ++H L++R+G + V
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSV 257
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
+L+T+YAK A++ A ++N G N+ +
Sbjct: 258 TNALITTYAKCKR-------------------ADLAAQVFNELG--NKKTR--------- 287
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
+SWN +I N ++ LF M+ + PD++T VS++ A + + + +HG
Sbjct: 288 -ISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHG 346
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
+ ++ D +V LIDMY KCG + + ++F+ DR+VITW A+I G +GF Q
Sbjct: 347 YSIRHQL-DQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQ 405
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
A+E F EM+ G P+ ++VL AC H GLV EG + F M + YG+EP M+HY +
Sbjct: 406 AAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTM 465
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
VDLL R G L EA I MP P ++ L C+
Sbjct: 466 VDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACK 502
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 211/419 (50%), Gaps = 26/419 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR--GFEPTQFTFGGLL-SCDSLNPVE 57
MP R+ V++N++++ Y+R G A+ + M G P T +L +C +
Sbjct: 77 MPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALH 136
Query: 58 GA-QLQASVLKNGLFCADAFV--GTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
++ A L+ GL D V TA+L Y + G ++ +VF+ MP ++ V+WN+++
Sbjct: 137 ACREVHAFALRAGL---DELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMID 193
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ +G + M LF +V+ V +T++S + + L+ ++H L+++ G
Sbjct: 194 GYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV-VSWNTIIGALAESENFGKALELYLRM 233
+ V N+L+ Y +C A ++F ++ + +SWN +I ++E A L+ RM
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
++ V P+ T V VI + A + + + + IH I++ L+ DV+V +AL+D Y+KC +
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRV 373
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A F ++++++WNA+I GY S ++ L E+ G PNE TF VL +
Sbjct: 374 SIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAAC 433
Query: 353 LAFQLL---QLHCLIIRMGY------ENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
L+ Q + ++ Y E+Y G+++ ++G + +A +F+ N+P
Sbjct: 434 SHAGLVDEGQKYFASMKKDYGLEPGMEHY----GTMVDLLGRAGKLDEAWSFIK--NMP 486
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 126/532 (23%), Positives = 230/532 (43%), Gaps = 44/532 (8%)
Query: 39 PTQFTFGGLLS--CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS 96
P TF LL + G + A + GL +++ TAL +Y + +
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGL-ASESIASTALANMYFKCRRPADARR 72
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS--FVGVIHGLSNE 154
VF+ MP + V WN++V+ + ++G M + E S V V+ ++
Sbjct: 73 VFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADA 132
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+ L ++H ++ G D + V+ ++++ Y +C + +A +F + +R+ VSWN +I
Sbjct: 133 RALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMI 192
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
A++ N +A+ L+ RM + V + + + +C L + +H +++ L
Sbjct: 193 DGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLS 252
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI-VSWNALILGYASKSSPTSIFLLIEL 333
+V V +AL+ YAKC + A F+E+ NK +SWNA+ILG+ P L
Sbjct: 253 SNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFAR 312
Query: 334 LQL-GYRPNEFTFSHVLRS----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
+QL RP+ FT V+ + S Q +H IR + YVL +L+ Y+K G
Sbjct: 313 MQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGR 372
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
+S I R +L +++WN +I
Sbjct: 373 VS----------IAR----------------------RLFDSARDRHVITWNAMIHGYGS 400
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
+G + +ELF+ M+ P+ TF+S+L+ACS + G +KK +
Sbjct: 401 HGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGME 460
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALE 559
++D+ G+ G + + M + + + A++ A L+ + A E
Sbjct: 461 HYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEE 512
>gi|413915870|gb|AFW55802.1| hypothetical protein ZEAMMB73_686110 [Zea mays]
Length = 810
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 182/668 (27%), Positives = 317/668 (47%), Gaps = 60/668 (8%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE--- 57
P RN V++ +I+SA +R G LR+F M+ GF P +F L +C +
Sbjct: 121 PSRNHVTWTAIVSAAARGGAPGLGLRLFASMLRSGFCPNEFALASALGACCQWVAADVKL 180
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS--LVTWNSIVSI 115
G L ++ + + +VG++L+ +Y +HG + VF + S + WN+++
Sbjct: 181 GLSLHGLAVR-AVLHGNPYVGSSLMLVYAKHGRVAAAERVFAGIASGSRDVACWNAMLEG 239
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ +G D + S +A +++ +DL FG Q+HGLV+++ +
Sbjct: 240 YVANGHGYDATRTVALMHGSGIAPDMFTYISAAKASWIARDLYFGRQVHGLVVRSVLESN 299
Query: 176 -LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V N+L++MYF+ +A +F + +D VSWNT+I L E+ A + ++ M+
Sbjct: 300 NTSVMNALMDMYFKAGQKETAADIFGKIRWKDTVSWNTMISGL---EDERAAADCFVDMA 356
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
NQ TF ++ L + LG I ++ +V V +A ++ ++C L
Sbjct: 357 RCGCRSNQVTFSVMLR----LSGASLGLQIFGLAYRHGYSDNVLVANAAINMLSRCGLLS 412
Query: 295 GAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A+ F ++ +N+V+WN +I GY S ++ L L+ G RP+EFT+ VL
Sbjct: 413 CAYGYFCDLGVRNVVTWNEMIAGYGLHGCSGDAMRLFRSLVCFGARPDEFTYPAVLS--- 469
Query: 354 AFQL-------LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
AFQ Q+H +++ G+ + ++V SL+ AK+ L S L
Sbjct: 470 AFQQDHDARNHEQVHASVLKQGFASCQFVSTSLIK--AKAALGSSVLG------------ 515
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA-A 465
+K++ D+VSW + I+A +G +E L LF R
Sbjct: 516 -----------------PLKIIQDAGEMDLVSWGVAISAFVKHGLGQEALSLFNSCRVDC 558
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
PD + ++L+AC+ + +H L+ +T S V + L+D Y KCG I +
Sbjct: 559 PEKPDEFILGTILNACANAALIRQCRCIHSLVVRTGH-SKHLCVSSALVDAYAKCGDITA 617
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK-PDRVALIAVLTACR 584
+ F ++ ++ I + +++A +G + L ++EM L P +A ++AC
Sbjct: 618 AKGAFATVSTKDAIVYNTMLTAYANHGLIREVLSLYQEMTQLQLAAPTPATFVAAISACS 677
Query: 585 HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
H GLV +G LF M ++G+ P +Y C++DLL R G L+EA +I MPF P +W
Sbjct: 678 HLGLVEQGKLLFSSMLSAHGMNPTRANYACLIDLLARRGLLEEATGVIQAMPFQPWPAVW 737
Query: 645 RTFLEGCQ 652
R+ + GC+
Sbjct: 738 RSLMNGCR 745
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 149/578 (25%), Positives = 253/578 (43%), Gaps = 64/578 (11%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G+QL AS +K G+ AD + LL Y + G L + VF++ P ++ VTW +IVS
Sbjct: 77 GSQLHASGIKLGVVFADTYTSNQLLIHYSKRGQLASALDVFDETPSRNHVTWTAIVSAAA 136
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN--EQDLEFGEQIHGLVIKNGFDYE 175
+ G + LF ++RS E + + D++ G +HGL ++
Sbjct: 137 RGGAPGLGLRLFASMLRSGFCPNEFALASALGACCQWVAADVKLGLSLHGLAVRAVLHGN 196
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVE--IRDVVSWNTII-GALAESENFGKALELYLR 232
V +SL+ +Y + + +AE++F + RDV WN ++ G +A + + L
Sbjct: 197 PYVGSSLMLVYAKHGRVAAAERVFAGIASGSRDVACWNAMLEGYVANGHGYDATRTVAL- 255
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC-DVFVGSALVDFYAKCD 291
M + P+ T++ + ++ G+ +H V+++ LE + V +AL+D Y K
Sbjct: 256 MHGSGIAPDMFTYISAAKASWIARDLYFGRQVHGLVVRSVLESNNTSVMNALMDMYFKAG 315
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
E A F +I K+ VSWN +I G + + F +++ + G R N+ TFS +LR
Sbjct: 316 QKETAADIFGKIRWKDTVSWNTMISGLEDERAAADCF--VDMARCGCRSNQVTFSVMLRL 373
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
S A LQ+ L R GY + V + + ++ GL+S A + L
Sbjct: 374 SGASLGLQIFGLAYRHGYSDNVLVANAAINMLSRCGLLSCAYGYFCDL------------ 421
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
G+ N +V+WN +IA +G + + LF+ + PD
Sbjct: 422 -GVRN-------------------VVTWNEMIAGYGLHGCSGDAMRLFRSLVCFGARPDE 461
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG-SIGSSVKIF 530
+T+ ++LSA + + +H + K + +S FV LI G S+ +KI
Sbjct: 462 FTYPAVLSAFQQDHDARNHEQVHASVLK-QGFASCQFVSTSLIKAKAALGSSVLGPLKII 520
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEF-LGFKPDRVALIAVLTACRHGGLV 589
+ + ++++W ISA +G Q AL F KPD L +L AC + L+
Sbjct: 521 QDAGEMDLVSWGVAISAFVKHGLGQEALSLFNSCRVDCPEKPDEFILGTILNACANAALI 580
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
R+ C+ L+VR GH K
Sbjct: 581 RQ--------------------CRCIHSLVVRTGHSKH 598
>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Glycine max]
Length = 703
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 160/591 (27%), Positives = 286/591 (48%), Gaps = 43/591 (7%)
Query: 73 ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL 132
AD + L+ Y + L+ VF++MP + V+WN+I+S F G ++ L +
Sbjct: 26 ADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDLDTTWQLLGAM 85
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
RS A +F ++ G++ L+ G+Q+H +++K G + ++L++MY +C +
Sbjct: 86 RRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRV 145
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
+F+ + R+ VSWNT++ + + + A + M ++ V + T ++
Sbjct: 146 DDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEIDDGTVSPLLTLL 205
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS-EISNKNIVSW 311
L +H K++K+ LE V +A + Y++C +L+ A F + +++V+W
Sbjct: 206 DNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFDGAVLCRDLVTW 265
Query: 312 NALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ-----LHCLII 365
N+++ Y F + +++ G+ P+ +T++ ++ + + Q + LH L+I
Sbjct: 266 NSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIV-GACSVQEHKTCGKCLHGLVI 324
Query: 366 RMGYENYEYVLGSLMTSYAK--SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
+ G +N V +L++ Y + + DAL
Sbjct: 325 KRGLDNSVPVSNALISMYIRFNDRCMEDAL------------------------------ 354
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
++ ++ D +WN ++A G ++ L LF MR I D+YTF +++ +CS
Sbjct: 355 --RIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSD 412
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
L L LG H L K ++++V + LI MY KCG I + K F + N I W +
Sbjct: 413 LATLQLGQQFHVLALKVGF-DTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNS 471
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSY 603
+I +G AL+ F M+ K D + +AVLTAC H GLV EG E M +
Sbjct: 472 IIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDF 531
Query: 604 GVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC 654
G+ P +HY C +DL R GHLK+A ++ TMPF P+A++ +T L C+ C
Sbjct: 532 GIPPRQEHYACAIDLYGRAGHLKKATALVETMPFEPDAMVLKTLLGACRFC 582
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 160/588 (27%), Positives = 282/588 (47%), Gaps = 57/588 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+ VS+N+IISA++ G ++ ++ M TFG +L + ++ G
Sbjct: 54 MPHRDTVSWNAIISAFASSGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLG 113
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL + +LK GL + F G+ALL +Y + G +D+ VF+ MP ++ V+WN++V+ + +
Sbjct: 114 QQLHSVMLKVGL-SENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSR 172
Query: 119 HGFVEDCMFLFCELVRSE---VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
G DC F L E V + + + ++ L N + Q+H ++K+G +
Sbjct: 173 VG---DCDMAFWVLSCMELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELF 229
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKD-VEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V N+ + Y +C + AE++F V RD+V+WN+++GA E A +++L M
Sbjct: 230 NTVCNATITAYSECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQ 289
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN-- 292
P+ T+ ++ +C+ ++ GK +H VIK L+ V V +AL+ Y + ++
Sbjct: 290 NFGFEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRC 349
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
+E A F + K+ +WN+++ GY S ++ L +++ L + +TFS V+RS
Sbjct: 350 MEDALRIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRS 409
Query: 352 SLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
LQL H L +++G++ YV SL+ Y+K G+I DA A + A+V
Sbjct: 410 CSDLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVW 469
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFK--- 460
+II G Y + GQ N + L ++ + D +++ V+ AC+HNG +E +
Sbjct: 470 NSIIFG-YAQHGQGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESME 528
Query: 461 ------------------YMRAARIY------------PDNYTFVSLLSACSKLCNLALG 490
Y RA + PD +LL AC ++ L
Sbjct: 529 SDFGIPPRQEHYACAIDLYGRAGHLKKATALVETMPFEPDAMVLKTLLGACRFCGDIELA 588
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
S + ++ + E T+V +L +MYG+ G + M +R V
Sbjct: 589 SQIAKILLELEPEEHCTYV--ILSEMYGRFKMWGEKASVTRMMRERGV 634
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 226/496 (45%), Gaps = 45/496 (9%)
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H IK G + AN+L+ Y +C + SA ++F ++ RD VSWN II A A S +
Sbjct: 16 HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDL 75
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
+L M + TF ++ A + LG+ +H+ ++K L +VF GSAL
Sbjct: 76 DTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSAL 135
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNE 342
+D YAKC ++ ++ F + +N VSWN L+ Y+ F ++ ++L G ++
Sbjct: 136 LDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEIDD 195
Query: 343 FTFS---HVLRSSLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
T S +L +++ ++L +QLHC I++ G E + V + +T+Y++ + DA
Sbjct: 196 GTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFDG 255
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
+ R D+V+WN ++ A + ++
Sbjct: 256 AVLCR-------------------------------DLVTWNSMLGAYLMHEKEDLAFKV 284
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY- 517
F M+ PD YT+ ++ ACS + G LHGL+ K + +S V N LI MY
Sbjct: 285 FLDMQNFGFEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNS-VPVSNALISMYI 343
Query: 518 ---GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
+C + +++IF M ++ TW ++++ G ++ AL F +M L + D
Sbjct: 344 RFNDRC--MEDALRIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHY 401
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
AV+ +C ++ G + F + G + ++ + + G +++A K
Sbjct: 402 TFSAVIRSCSDLATLQLGQQ-FHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEA 460
Query: 635 MPFPPNALIWRTFLEG 650
NA++W + + G
Sbjct: 461 TS-KDNAIVWNSIIFG 475
>gi|15236431|ref|NP_192561.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208454|sp|Q9SUF9.1|PP305_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g08210
gi|5262194|emb|CAB45791.1| putative protein [Arabidopsis thaliana]
gi|7267461|emb|CAB81157.1| putative protein [Arabidopsis thaliana]
gi|332657209|gb|AEE82609.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 686
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 177/647 (27%), Positives = 311/647 (48%), Gaps = 76/647 (11%)
Query: 46 GLLSCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK 104
GL C + + G +QA V+K G+ + F+ ++ +Y L + VF++M +
Sbjct: 11 GLRHCGKVQAFKRGESIQAHVIKQGI-SQNVFIANNVISMYVDFRLLSDAHKVFDEMSER 69
Query: 105 SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEV-ALTESSFVGVIHGLSNEQDLEFGEQI 163
++VTW ++VS + G + L+ ++ SE A E + V+ D++ G +
Sbjct: 70 NIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILV 129
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
+ + K ++++ NS+V+MY + + A FK++ SWNT+I ++
Sbjct: 130 YERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLM 189
Query: 224 GKALELYLRMS--------------VDIVFPNQTTFV-------YVINSCA---GLQNS- 258
+A+ L+ RM VD P F+ V++ A GL+
Sbjct: 190 DEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACS 249
Query: 259 -----ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE---ISNKNIVS 310
+GK +H V+K+ LE F SAL+D Y+ C +L A F + N ++
Sbjct: 250 FGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAV 309
Query: 311 WNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF---QL-LQLHCLII 365
WN+++ G+ ++ + +++LL+++ Q + +T S L+ + + +L LQ+H L++
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV 369
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
GYE +Y++GS I+ ++ G +
Sbjct: 370 VSGYE-LDYIVGS-------------------------------ILVDLHANVGNIQDAH 397
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
KL +L DI++++ +I C +G LF+ + + D + ++L CS L
Sbjct: 398 KLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLA 457
Query: 486 NLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
+L G +HGL IKK S+ L+DMY KCG I + V +F+ M +R+V++WT +
Sbjct: 458 SLGWGKQIHGLCIKKG--YESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGI 515
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I G NG + A F +M +G +P++V + +L+ACRH GL+ E E M YG
Sbjct: 516 IVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYG 575
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+EP ++HY+CVVDLL + G +EA ++I MP P+ IW + L C
Sbjct: 576 LEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTAC 622
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 141/594 (23%), Positives = 262/594 (44%), Gaps = 81/594 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPT-QFTFGGLL-SCDSLNPVEG 58
M +RN+V++ +++S Y+ G A+ ++ M++ E +F + +L +C + ++
Sbjct: 66 MSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQL 125
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L + D + +++ +Y ++G L E S F+++ R S +WN+++S + K
Sbjct: 126 GILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCK 185
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF------------------- 159
G +++ + LF + + V G + + + LEF
Sbjct: 186 AGLMDEAVTLFHRMPQPNVVSWNCLISGFVDK-GSPRALEFLVRMQREGLVLDGFALPCG 244
Query: 160 ------------GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI--- 204
G+Q+H V+K+G + ++L++MY C + A +F ++
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
V WN+++ +E AL L L++ D+ F + T + C N LG
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCF-DSYTLSGALKICINYVNLRLGLQ 363
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG-YASKS 322
+H+ V+ + E D VGS LVD +A N++ AH F + NK+I++++ LI G S
Sbjct: 364 VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGF 423
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGS 378
+ + +L EL++LG ++F S++L+ + L Q+H L I+ GYE+ +
Sbjct: 424 NSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATA 483
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
L+ Y K G I + + + LER D+VS
Sbjct: 484 LVDMYVKCGEIDNGVVLFDGM-------------------------------LER-DVVS 511
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
W +I NG +E F M I P+ TF+ LLSAC L S +K
Sbjct: 512 WTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMK 571
Query: 499 KTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALG 549
+ + + C ++D+ G+ G + ++ N+M + + WT+L++A G
Sbjct: 572 SEYGLEPYLEHYYC--VVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACG 623
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/500 (23%), Positives = 220/500 (44%), Gaps = 66/500 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQF---------TFGGLLSCD 51
MP NVVS+N +IS + G AL + M G F +FGGLL+
Sbjct: 199 MPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTM- 256
Query: 52 SLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP---RKSLVT 108
G QL V+K+GL + F +AL+ +Y G L VF S+
Sbjct: 257 ------GKQLHCCVVKSGLE-SSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAV 309
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
WNS++S F + E ++L ++ +S++ + G + N +L G Q+H LV+
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV 369
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
+G++ + +V + LV+++ I A K+F + +D+++++ +I +S A
Sbjct: 370 VSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFY 429
Query: 229 LY---LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
L+ +++ +D +Q ++ C+ L + GK IH IK E + +ALVD
Sbjct: 430 LFRELIKLGLD---ADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVD 486
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFT 344
Y KC ++ + F + +++VSW +I+G+ F +++ +G PN+ T
Sbjct: 487 MYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVT 546
Query: 345 FSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
F LG L+++ SGL+ +A + + +
Sbjct: 547 F------------------------------LG-LLSACRHSGLLEEARSTLETMKSEYG 575
Query: 405 VVP----ANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELF 459
+ P + + + G + E +L++++ PD W ++ AC + + V +
Sbjct: 576 LEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIA 635
Query: 460 KYMRAARIYPDNYTFVSLLS 479
+ + + +PD+ + + LS
Sbjct: 636 E--KLLKGFPDDPSVYTSLS 653
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 161/559 (28%), Positives = 278/559 (49%), Gaps = 41/559 (7%)
Query: 104 KSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE----VALTESSFVGVIHGLSNEQDLEF 159
++ V+WNS++ +F +GF E+ L E++ ++ V V+ + E+++
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
G+ +HG +K D EL++ N+L++MY +C I +A+ +FK ++VVSWNT++G +
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 220 SENFGKALELYLRMSV--DIVFPNQTTFVYVINSCAGLQNSILG--KSIHAKVIKNALEC 275
+ ++ +M + V ++ T + + C S L K +H +K
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC--FHESFLPSLKELHCYSLKQEFVY 178
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELL 334
+ V +A V YAKC +L A F I +K + SWNALI G+A + P S+ +++
Sbjct: 179 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 238
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
G P+ FT +L + + L R+G E + +++ ++ L D
Sbjct: 239 ISGLLPDSFTVCSLLSACSKLKSL-------RLGKEVHGFII--------RNWLERDLFV 283
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
+++ L++ Y G+ L +E +VSWN VI NG
Sbjct: 284 YLSVLSL-------------YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDR 330
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
L +F+ M I + + + ACS L +L LG H K ++ D F+ LI
Sbjct: 331 ALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK-HLLEDDAFIACSLI 389
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
DMY K GSI S K+FN + +++ +W A+I G++G A+ A++ F EM+ G PD +
Sbjct: 390 DMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDL 449
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT- 633
+ VLTAC H GL+ EG+ ++M S+G++P + HY CV+D+L R G L +A +++
Sbjct: 450 TFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE 509
Query: 634 TMPFPPNALIWRTFLEGCQ 652
M + IW++ L C+
Sbjct: 510 EMSEEADVGIWKSLLSSCR 528
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 143/595 (24%), Positives = 277/595 (46%), Gaps = 49/595 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINR----GFEPTQFTFGGLLS-CDSLNPV-- 56
RN VS+NS+I +S G+ E++ + M+ F P T +L C +
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 57 -EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
+G A L+ + + AL+ +Y + GC+ +F+ K++V+WN++V
Sbjct: 61 GKGVHGWAVKLR---LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 117
Query: 116 FGKHGFVEDCMFLFCELVR--SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
F G + +++ +V E + + + +E L +++H +K F
Sbjct: 118 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 177
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
Y LVAN+ V Y +C + A+++F + + V SWN +IG A+S + +L+ +L+M
Sbjct: 178 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 237
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ + P+ T ++++C+ L++ LGK +H +I+N LE D+FV +++ Y C L
Sbjct: 238 KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 297
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSS 352
F + +K++VSWN +I GY P ++ + +++ G + + V
Sbjct: 298 CTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG-- 355
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
A LL +R+G E + Y L L+ DA + ++
Sbjct: 356 -ACSLLP----SLRLGREAHAYALKHLLE--------DDAFIACSLID------------ 390
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G ++ K+ + L+ SWN +I +G KE ++LF+ M+ PD+
Sbjct: 391 -MYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDL 449
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF-N 531
TF+ +L+AC+ + G +K + + + +IDM G+ G + ++++
Sbjct: 450 TFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE 509
Query: 532 EMTDR-NVITWTALISALGLNG---FAQRALEKFREMEFLGFKPDRVALIAVLTA 582
EM++ +V W +L+S+ ++ ++ K E+E KP+ L++ L A
Sbjct: 510 EMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELE--PEKPENYVLLSNLYA 562
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 134/598 (22%), Positives = 265/598 (44%), Gaps = 90/598 (15%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG--FEPTQFT-FGGLLSC--DSLNPVE 57
++NVVS+N+++ +S G + M+ G + + T + C +S P
Sbjct: 105 NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLP-S 163
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+L LK F + V A + Y + G L VF + K++ +WN+++ G
Sbjct: 164 LKELHCYSLKQE-FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALI---G 219
Query: 118 KHGFVEDC-MFLFCELVRSEVALTESSFV--GVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
H D + L L L SF ++ S + L G+++HG +I+N +
Sbjct: 220 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 279
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+L V S++++Y C + + + +F +E + +VSWNT+I ++ +AL ++ +M
Sbjct: 280 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 339
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ + + + V +C+ L + LG+ HA +K+ LE D F+ +L+D YAK ++
Sbjct: 340 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 399
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
+ F+ + K+ SWNA+I+GY + +I L E+ + G+ P++ TF VL
Sbjct: 400 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVL---- 455
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----N 409
T+ SGLI + L ++ + + P
Sbjct: 456 ---------------------------TACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYA 488
Query: 410 IIAGIYNRTGQYNETVKLLSQ--LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+ + R GQ ++ ++++++ E D+ W ++++C + LE+ + + AA++
Sbjct: 489 CVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCR----IHQNLEMGEKV-AAKL 543
Query: 468 Y------PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
+ P+NY +S L A GL K ++ + M + C
Sbjct: 544 FELEPEKPENYVLLSNLYA--------------GLGKWEDVRKVRQRMNEMSLRKDAGCS 589
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ-RALEKFREMEF--LGFKPDRVAL 576
I + K+F + ++ L+GF + ++L EM+ +G++PD +++
Sbjct: 590 WIELNRKVF-----------SFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSV 636
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 169/377 (44%), Gaps = 31/377 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--G 58
M D+++VS+N++I+ Y + G+ + AL +F M+ G + + + SL P G
Sbjct: 307 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 366
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A LK+ L DAF+ +L+ +Y ++G + + VF + KS +WN+++ +G
Sbjct: 367 REAHAYALKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 425
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN----EQDLEFGEQIHGLVIKNGFDY 174
HG ++ + LF E+ R+ + +F+GV+ ++ + L + +Q+ G
Sbjct: 426 HGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSF---GLKP 482
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKD--VEIRDVVSWNTIIGALAESENFGKALELYLR 232
L +++M + + A ++ + E DV W +++ + +N ++ +
Sbjct: 483 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 542
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ ++ +V + N AGL + + ++ + +L D A C
Sbjct: 543 L-FELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKD-----------AGCSW 590
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
+E FS + + + G+ S SI L +++ ++GYRP+ + H L
Sbjct: 591 IELNRKVFSFVVGERFLD------GFEEIKSLWSI-LEMKISKMGYRPDTMSVQHDLSEE 643
Query: 353 LAFQLLQLHCLIIRMGY 369
+ L+ H + + Y
Sbjct: 644 EKIEQLRGHSEKLALTY 660
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 260/509 (51%), Gaps = 40/509 (7%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
+H L + +GF + VA++L +YF + A K+F V D V WNT++ L+ SE
Sbjct: 145 LHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGSE- 203
Query: 223 FGKALELYLRMS-VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
ALE ++RM+ V P+ TT V+ + A + N+ +G+ +HA K L V +
Sbjct: 204 ---ALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVT 260
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRP 340
L+ YAKC ++E A F + ++V++NALI GY+ + +S+ L EL+ +G RP
Sbjct: 261 GLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRP 320
Query: 341 NEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
+ SS L+ +H +E + G L K+GL ++A TAL
Sbjct: 321 S---------SSTLVALIPVHSPF------GHEPLAGCLHAHVVKAGLDANA-PVSTALT 364
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
+Y R + + + + SWN +I+ A NG + + LF+
Sbjct: 365 T------------LYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQ 412
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M+A + P+ T S LSAC++L L+LG +H +I E + + +V LIDMY KC
Sbjct: 413 QMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIAN-EKLELNVYVMTALIDMYVKC 471
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
GSI + IF+ M ++NV++W +IS GL+G AL+ +++M P ++VL
Sbjct: 472 GSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVL 531
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
AC HGGLV+EG +F M YG+ P ++H C+VDLL R G LKEA ++I+ FP +
Sbjct: 532 YACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISE--FPKS 589
Query: 641 AL---IWRTFLEGCQRCRIAKYDTLNSTK 666
A+ IW L C + L S K
Sbjct: 590 AVGPGIWGALLGACMVHKDGDLAKLASQK 618
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 124/516 (24%), Positives = 230/516 (44%), Gaps = 48/516 (9%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L A + +G F AD FV +AL LY ++ VF+ +P V WN++++ G G
Sbjct: 145 LHALAVASG-FAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLA--GLSG 201
Query: 121 FVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + F + + V ++ V+ + + G +H K G V
Sbjct: 202 --SEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVV 259
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
L+++Y +C + A +F +E D+V++N +I + + G ++EL+ + +
Sbjct: 260 TGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLR 319
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ +T V +I + + L +HA V+K L+ + V +AL Y + ++++ A
Sbjct: 320 PSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRA 379
Query: 300 FSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F + K + SWNA+I GYA + ++ L ++ L RPN T S L + L
Sbjct: 380 FDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGAL 439
Query: 359 QL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
L H +I E YV+ +L+ Y K G I++A
Sbjct: 440 SLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARC-------------------- 479
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+ ++ ++VSWN++I+ +G E L+L+K M A ++P + TF
Sbjct: 480 ------------IFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTF 527
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+S+L ACS + G+++ + I+ C ++D+ G+ G + + ++ +E
Sbjct: 528 LSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFP 587
Query: 535 DRNVIT--WTALISALGLN---GFAQRALEKFREME 565
V W AL+ A ++ A+ A +K E+E
Sbjct: 588 KSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELE 623
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 186/435 (42%), Gaps = 55/435 (12%)
Query: 233 MSVDIVFPNQTTFVY------VINSCA--GLQN----SILGKSIHAKVIKNALECDVFVG 280
+ D++FP+ +F + + +SC+ G+ S + +HA + + D FV
Sbjct: 102 LRADLLFPSPDSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVA 161
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YR 339
SAL Y A F + + + V WN L+ G S ++ + + G R
Sbjct: 162 SALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGL---SGSEALEAFVRMAGAGSVR 218
Query: 340 PNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
P+ T + VL ++ + H + G +E+V+ L++ YAK G + A
Sbjct: 219 PDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECAR-- 276
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
L ++E PD+V++N +I+ + NG
Sbjct: 277 ------------------------------HLFDRMEGPDLVTYNALISGYSINGMVGSS 306
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
+ELFK + + P + T V+L+ S + L LH + K + ++ V L
Sbjct: 307 VELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAG-LDANAPVSTALTT 365
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
+Y + + S+ + F+ M ++ + +W A+IS NG + A+ F++M+ L +P+ +
Sbjct: 366 LYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLT 425
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+ + L+AC G + G + ++ + +E + ++D+ V+ G + EA I +M
Sbjct: 426 ISSALSACAQLGALSLG-KWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSM 484
Query: 636 PFPPNALIWRTFLEG 650
N + W + G
Sbjct: 485 DN-KNVVSWNVMISG 498
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 171/385 (44%), Gaps = 53/385 (13%)
Query: 312 NALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYEN 371
++L+L YAS SP + L+ L + RP+ F + +LRS L+ L +
Sbjct: 61 SSLLLRYASLRSPPA--HLLRLYRAFPRPDRFLRNSLLRS---LPTLRADLLFPSPDSFS 115
Query: 372 YEYVLGSLMTSYAKSGL-----ISDALAFVTALNIPRAVVPANIIAG----IYNRTGQYN 422
+ + SL +S ++ G+ S AL + AL + N +A +Y + N
Sbjct: 116 FAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFTLSRGN 175
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR-AARIYPDNYTFVSLLSAC 481
+ K+ + PD V WN ++A + + E LE F M A + PD+ T S+L A
Sbjct: 176 DARKVFDAVPSPDTVLWNTLLAGLSGS----EALEAFVRMAGAGSVRPDSTTLASVLPAA 231
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
+++ N +G +H +K + + V LI +Y KCG + + +F+ M +++T+
Sbjct: 232 AEVANTTMGRCVHAFGEKCGLAQHEHVVTG-LISLYAKCGDMECARHLFDRMEGPDLVTY 290
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV-----------LTACRHGGLVR 590
ALIS +NG ++E F+E+ +G +P L+A+ L C H +V+
Sbjct: 291 NALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVK 350
Query: 591 EGME-----------LFERMN------RSYGVEPE--MDHYHCVVDLLVRYGHLKEAEKI 631
G++ L+ R N R++ PE M+ ++ ++ + G + A +
Sbjct: 351 AGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVAL 410
Query: 632 ITTMP---FPPNALIWRTFLEGCQR 653
M PN L + L C +
Sbjct: 411 FQQMQALNVRPNPLTISSALSACAQ 435
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP++ + S+N++IS Y++ G E A+ +F M P T LS C L +
Sbjct: 383 MPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLG 442
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ ++ N + +V TAL+ +Y + G + E +F+ M K++V+WN ++S +G H
Sbjct: 443 KWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLH 502
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG 171
G + + L+ +++ + + T S+F+ V++ S HG ++K G
Sbjct: 503 GQGAEALKLYKDMMDAHLHPTSSTFLSVLYACS-----------HGGLVKEG 543
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 152/496 (30%), Positives = 244/496 (49%), Gaps = 30/496 (6%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
+ IH +++ G D + + N ++ F + ++ + ++ +NT+I L +
Sbjct: 27 KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
+ F +++E+Y M + + P+ TF +V+ +CA + +S LG +H+ V+K E D FV
Sbjct: 87 DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVK 146
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYR 339
+L++ Y KC ++ A F +I +KN SW A I GY +I + LL++G R
Sbjct: 147 ISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLR 206
Query: 340 PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
P+ F+ VL + T +SG D ++T
Sbjct: 207 PDSFSLVEVLSA--------------------------CKRTGDLRSGEWID--EYITEN 238
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ R V A + Y + G + + +IVSW+ +I A NG KE L+LF
Sbjct: 239 GMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLF 298
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
M + PD Y V +L +C++L L LG LI E + ++ + LIDMY K
Sbjct: 299 FKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFL-DNSVLGTALIDMYAK 357
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
CG + + ++F M ++ + W A IS L ++G + AL F +ME G KPDR + +
Sbjct: 358 CGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGL 417
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
L AC H GLV EG F M + + PE++HY C+VDLL R G L EA ++I +MP
Sbjct: 418 LCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEA 477
Query: 640 NALIWRTFLEGCQRCR 655
NA++W L GC+ R
Sbjct: 478 NAIVWGALLGGCRLHR 493
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 191/415 (46%), Gaps = 30/415 (7%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
+F V+ + D E G ++H LV+K G + + V SL+N+Y +C I +A K+F D+
Sbjct: 110 TFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDI 169
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
++ SW I +A++++ R+ + P+ + V V+++C + G+
Sbjct: 170 PDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGE 229
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
I + +N + +VFV +ALVDFY KC N+E A F + KNIVSW+++I GYAS
Sbjct: 230 WIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNG 289
Query: 323 SPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMT 381
P ++ L ++L G +P+ + VL C R+G LG +
Sbjct: 290 LPKEALDLFFKMLNEGLKPDCYAMVGVL------------CSCARLG----ALELGDWAS 333
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
+ D TAL +Y + G+ + ++ + + D V WN
Sbjct: 334 NLINGNEFLDNSVLGTAL------------IDMYAKCGRMDRAWEVFRGMRKKDRVVWNA 381
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
I+ A +G K+ L LF M + I PD TFV LL AC+ + G ++
Sbjct: 382 AISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVF 441
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQ 555
++ + ++D+ G+ G + + ++ M + N I W AL+ L+ Q
Sbjct: 442 TLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQ 496
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 173/349 (49%), Gaps = 6/349 (1%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEGAQLQ 62
N+ FN++I ++++ ++ M G P FTF +L + L+ G ++
Sbjct: 72 NIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMH 131
Query: 63 ASVLKNGLFC-ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ V+K G C ADAFV +L+ LY + G +D VF+D+P K+ +W + +S + G
Sbjct: 132 SLVVKAG--CEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGK 189
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + +F L+ + S V V+ DL GE I + +NG + VA +
Sbjct: 190 CREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATA 249
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
LV+ Y +C + A +F + +++VSW+++I A + +AL+L+ +M + + P+
Sbjct: 250 LVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPD 309
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
V V+ SCA L LG + N + +G+AL+D YAKC ++ A F
Sbjct: 310 CYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFR 369
Query: 302 EISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL 349
+ K+ V WNA I G A S ++ L ++ + G +P+ TF +L
Sbjct: 370 GMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLL 418
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 161/333 (48%), Gaps = 29/333 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+PD+N S+ + IS Y G +A+ MF ++ G P F+ +LS C + G
Sbjct: 169 IPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSG 228
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + +NG+ + FV TAL+ YG+ G ++ SVF+ M K++V+W+S++ +
Sbjct: 229 EWIDEYITENGMV-RNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYAS 287
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G ++ + LF +++ + + VGV+ + LE G+ L+ N F ++
Sbjct: 288 NGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVL 347
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+L++MY +C + A ++F+ + +D V WN I LA S + AL L+ +M +
Sbjct: 348 GTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGI 407
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIK------NALECDVFVGSALVDFYAKCDN 292
P++ TFV ++ +C HA +++ N++EC VF + ++ Y +
Sbjct: 408 KPDRNTFVGLLCACT-----------HAGLVEEGRRYFNSMEC-VFTLTPEIEHYGCMVD 455
Query: 293 LEGAHLCFSEISN--------KNIVSWNALILG 317
L G C E N + W AL+ G
Sbjct: 456 LLGRAGCLDEAHQLIKSMPMEANAIVWGALLGG 488
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 242/481 (50%), Gaps = 44/481 (9%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N++++ YF+ + A K+F RD SWN ++ ++ G+ L +++M V
Sbjct: 85 NTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVR 144
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ T+ +I C + G+ +HA ++K + D F+G+ L+ YA+ + A
Sbjct: 145 PDNFTYAIIIPCC----DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKV 200
Query: 300 FSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA---- 354
F + ++ +V+WNA+I Y+ SI L +L + G +E+T++ VL A
Sbjct: 201 FDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQV 260
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
F+ +Q+H LII G+ + + +L+ Y+K G ++ A
Sbjct: 261 FEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASA---------------------- 298
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+L ++ D+VSW ++I +G +E + LF M+ I P+++TF
Sbjct: 299 ----------SRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTF 348
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
LL AC+ G HGL+ K ++ +D V + ++DMY KCG +G +++ F EM
Sbjct: 349 GGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMP 408
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFL---GFKPDRVALIAVLTACRHGGLVRE 591
+R++ +W +I NG +AL+ + EM L G P+ V + VL AC H GL++E
Sbjct: 409 ERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKE 468
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G F+ M + ++P +HY C+VDLL R G L+EAE +I +P P+ ++W L C
Sbjct: 469 GYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGAC 528
Query: 652 Q 652
+
Sbjct: 529 K 529
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 141/502 (28%), Positives = 238/502 (47%), Gaps = 91/502 (18%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRM-------------------------------F 29
MP +VVS+N+I+S Y + G V +A+++ F
Sbjct: 76 MPQPSVVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHF 135
Query: 30 LYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCA--DAFVGTALLGLYGR 87
+ M P FT+ ++ C L G Q+ A ++K C+ DAF+GT LL +Y
Sbjct: 136 MKMRCSSVRPDNFTYAIIIPCCDLG--FGQQVHADIVK---VCSDLDAFIGTNLLRMYAE 190
Query: 88 HGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGV 147
G + + VF+ MP + LVTWN+++S + K+G + + LF +L R ++ E ++ V
Sbjct: 191 VGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIV 250
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
++ + + Q+H L+I+ GF + N+LVN+Y +C + SA ++F+++ +DV
Sbjct: 251 LNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDV 310
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
VSW II +S + +A+ L+ +M + + PN TF ++ +CA G+ H
Sbjct: 311 VSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGL 370
Query: 268 VIK-NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS 326
V+K L DV VGSA+VD Y+KC + A F E+ ++I SWN +I GYA +
Sbjct: 371 VLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMK 430
Query: 327 IFLLIELLQL----GYRPNEFTF-------SH--VLRSSLAF--QLLQLHCLIIRMGYEN 371
L + L G PNE TF SH +L+ ++ +++ H +I+ E+
Sbjct: 431 ALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKH--LIKPTAEH 488
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
Y ++ L ++GL+ +A A + AL I
Sbjct: 489 YTCMVDLL----GRAGLLQEAEALILALPI------------------------------ 514
Query: 432 ERPDIVSWNIVIAACAHNGDYK 453
+PD V W ++ AC +GD +
Sbjct: 515 -KPDNVMWGALLGACKLHGDVQ 535
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/533 (24%), Positives = 235/533 (44%), Gaps = 72/533 (13%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L AS++KNGL A + LL Y L + + MP+ S+V++N+I+S + K G
Sbjct: 37 LHASLVKNGLI-AHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFG 95
Query: 121 FVEDCMFLF-------CE---LVRSEVALTESSFVGVIHGLSNE---------------- 154
V + + LF C +V S G+ H +
Sbjct: 96 LVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIP 155
Query: 155 -QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTI 213
DL FG+Q+H ++K D + + +L+ MY + I A K+F + R +V+WN +
Sbjct: 156 CCDLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAM 215
Query: 214 IGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
I ++ K++ L+ ++ + + ++ T+ V+N A +H+ +I+
Sbjct: 216 ISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGF 275
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL 333
D F +ALV+ Y+KC + A F EI ++++VSW +I+G+ L
Sbjct: 276 CSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQ 335
Query: 334 LQLG-YRPNEFTFSHVLRS---SLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
+QLG PN FTF +L + + AFQ H L+++ G + V+GS
Sbjct: 336 MQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGS---------- 385
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
+ +Y++ G+ + ++ ++ DI SWN +I A
Sbjct: 386 ---------------------AVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQ 424
Query: 449 NGDYKEVLELFKYM---RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII-- 503
NG + L+L+ M + I P+ TFV +L ACS L G S + +I
Sbjct: 425 NGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKP 484
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQ 555
+++ + C ++D+ G+ G + + + + + + + W AL+ A L+G Q
Sbjct: 485 TAEHYTC--MVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGACKLHGDVQ 535
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 132/291 (45%), Gaps = 8/291 (2%)
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
LH +++ G + Y L+ +Y S +SDA + + P +VV N I Y + G
Sbjct: 37 LHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQP-SVVSYNTILSGYFKFG 95
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+E +KL + D SWNIV++ C N E L F MR + + PDN+T+ ++
Sbjct: 96 LVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIP 155
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
C+L G +H I K D F+ L+ MY + G IG + K+F+ M R ++
Sbjct: 156 C----CDLGFGQQVHADIVKV-CSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLV 210
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
TW A+IS G +++ FR++ G D VL V E M++ +
Sbjct: 211 TWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLI 270
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G + + +V+L + G++ A ++ +P + + W + G
Sbjct: 271 IER-GFCSDRFTNNALVNLYSKCGYVASASRLFEEIP-DQDVVSWTVIIVG 319
>gi|317106770|dbj|BAJ53262.1| JMS10C05.5 [Jatropha curcas]
Length = 638
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 173/571 (30%), Positives = 271/571 (47%), Gaps = 40/571 (7%)
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
M ++ +TW S++ + E + + E+ +S AL E + ++ S+ FG
Sbjct: 1 MLVRNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFG 60
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
+Q H VIK GFD ++V SL+ MY + AEK+F + +DV +N +I A +
Sbjct: 61 QQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARA 120
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
N KA+ +++ M + PN TF +I++C G G+ K + +G
Sbjct: 121 GNGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIG 180
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYR 339
+A+++ Y K A FS ++++N++SW ALI GY S ++ +EL G
Sbjct: 181 NAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVN 240
Query: 340 PNEFTFSHVL---RSSLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
+ + +L +L LQ+H L+I++GY
Sbjct: 241 FDSSLLTTILDGCSECRNLELGLQIHGLVIKLGY-------------------------- 274
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG--DYK 453
A+NI A+V +Y + G + L I S+N ++A N +
Sbjct: 275 ACAVNIGTALVD------LYAKCGNLMSARMVFDGLSSKRIASFNAILAGFMENSRDGEE 328
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
+ + LF + R I PD TF LLS + L G H KT +D V N +
Sbjct: 329 DPIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTLGRGRCYHAYAIKTGF-EADLSVANAV 387
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
I MY KCGSI + ++FN M D + I+W A+ISA L+G + L F EM F PD
Sbjct: 388 ITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAYALHGQGAKVLLLFEEMIKKEFAPDE 447
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
+ ++++L AC + GL R+G+ LF M YG++P ++HY C+VDLL R GHL EA II
Sbjct: 448 ITILSILQACTYSGLFRDGISLFNVMEPKYGIKPLLEHYACMVDLLGRAGHLSEAMDIIN 507
Query: 634 TMPFPPNALIWRTFLEGCQRCRIAKYDTLNS 664
PF + L+WRT + C+ C + L S
Sbjct: 508 KSPFSKSTLLWRTLVNVCKLCGDRNFGKLAS 538
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 155/580 (26%), Positives = 260/580 (44%), Gaps = 49/580 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLN-PVEGAQL 61
RN +++ S+I Y E AL + M G + T +L +C S + + G Q
Sbjct: 4 RNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFGQQF 63
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V+K G F + VGT+L+ +Y R + VF+ M K + +N ++ + + G
Sbjct: 64 HCFVIKCG-FDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARAGN 122
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E + +F ++ + + + +F +I + +E GEQ GL K GF E + N+
Sbjct: 123 GEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGNA 182
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
++NMY + AE+MF + R+++SW +I S + KA++ ++ + + V +
Sbjct: 183 IINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFD 242
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ +++ C+ +N LG IH VIK C V +G+ALVD YAKC NL A + F
Sbjct: 243 SSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVFD 302
Query: 302 EISNKNIVSWNALILGYASKS---SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
+S+K I S+NA++ G+ S I L G +P+ TFS +L S L
Sbjct: 303 GLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTL 362
Query: 359 Q----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
H I+ G+E V +++T YAK G I +A +N
Sbjct: 363 GRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMN-------------- 408
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
D +SWN +I+A A +G +VL LF+ M PD T
Sbjct: 409 ------------------DHDSISWNAMISAYALHGQGAKVLLLFEEMIKKEFAPDEITI 450
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+S+L AC+ G SL +++ I + + C ++D+ G+ G + ++ I N+
Sbjct: 451 LSILQACTYSGLFRDGISLFNVMEPKYGIKPLLEHYAC--MVDLLGRAGHLSEAMDIINK 508
Query: 533 MT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
++ + W L++ L G R K L P
Sbjct: 509 SPFSKSTLLWRTLVNVCKLCG--DRNFGKLASKYLLELSP 546
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 189/356 (53%), Gaps = 6/356 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CD-SLNPVEG 58
M ++V FN +I Y+R G E A+R+F+ M+N G +P +TF ++S CD L EG
Sbjct: 102 MACKDVRCFNFMILEYARAGNGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEG 161
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q K G F + +G A++ +YG+ G E +F M ++L++W +++S + +
Sbjct: 162 EQFLGLSFKYG-FLNETSIGNAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTR 220
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + F EL V S ++ G S ++LE G QIHGLVIK G+ + +
Sbjct: 221 SGDGKKAVDTFMELHLCGVNFDSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNI 280
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK--ALELYLRMSVD 236
+LV++Y +C + SA +F + + + S+N I+ E+ G+ + L+ +D
Sbjct: 281 GTALVDLYAKCGNLMSARMVFDGLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLD 340
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ P+ TF +++ A G+ HA IK E D+ V +A++ YAKC ++E A
Sbjct: 341 GIKPDMVTFSRLLSLSANHSTLGRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEA 400
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRS 351
H F+ +++ + +SWNA+I YA + LL E+++ + P+E T +L++
Sbjct: 401 HRMFNVMNDHDSISWNAMISAYALHGQGAKVLLLFEEMIKKEFAPDEITILSILQA 456
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 156/571 (27%), Positives = 272/571 (47%), Gaps = 40/571 (7%)
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALT-ESSFVGV 147
G L VF+ MP + +V+W +I+ + ++ M LF + + A++ ++S V V
Sbjct: 48 GNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSV 107
Query: 148 I-HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
+ ++ +GE +H +K + V +SL++MY + I + ++F ++ R+
Sbjct: 108 VLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRN 167
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
V+W II L + + + L + MS + TF + +CAGL+ GK IH
Sbjct: 168 AVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHT 227
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPT 325
VI + V+V ++L Y +C + F +S +++VSW +LI+ Y
Sbjct: 228 HVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEK 287
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMT 381
++ I++ PNE TF+ + + + L QLHC + +G
Sbjct: 288 AVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLG------------- 334
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
++D+L+ +N + +Y+ G+ + L + DI+SW+
Sbjct: 335 -------LNDSLSV------------SNSMMKMYSTCGKLDSASVLFQGMRCRDIISWST 375
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I + G +E + F +MR + P ++ SLLS + L G +H L
Sbjct: 376 IIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFG 435
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
+ + T V + LI+MY KCG+I + KIF E ++++ TA+I+ +G ++ A++ F
Sbjct: 436 LEQNST-VRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLF 494
Query: 562 REMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR 621
+ +GF PD V I+VLTAC H G + G F M Y + P +HY C+VDLL R
Sbjct: 495 EKSLKVGFSPDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCR 554
Query: 622 YGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G L EAEK+I M + + ++W T L C+
Sbjct: 555 AGRLSEAEKMIDEMSWKKDDVVWTTLLIACK 585
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 155/578 (26%), Positives = 273/578 (47%), Gaps = 46/578 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM--INRGFEPTQFTFGGLLSC--DSLNPV 56
MP R++VS+ +II Y ++A+ +F M ++ P +L S N
Sbjct: 60 MPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSVVLKACGQSSNIA 119
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G L A +K L + FVG++LL +Y R G +++ VF +MP ++ VTW +I++
Sbjct: 120 YGESLHAYAVKTSLL-SSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAIITGL 178
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G ++ + F E+ SE +F + + + +++G+QIH VI GFD +
Sbjct: 179 VHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATV 238
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VANSL MY +C + +F+++ RDVVSW ++I A + KA+E +++M
Sbjct: 239 WVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNS 298
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN+ TF + ++CA L + G+ +H V L + V ++++ Y+ C L+ A
Sbjct: 299 QVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSA 358
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAF 355
+ F + ++I+SW+ +I GY+ F + Q G +P +F + +L S
Sbjct: 359 SVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNM 418
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+L Q+H L G E V +L+ Y+K G I +A
Sbjct: 419 AVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEA------------------- 459
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
K+ + +R DIVS +I A +G KE ++LF+ PD+
Sbjct: 460 -------------SKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDS 506
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+S+L+AC+ L LG L+++ + ++D+ + G + + K+ +
Sbjct: 507 VTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMID 566
Query: 532 EMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
EM+ ++ + WT L+ A G +RA E+ E++
Sbjct: 567 EMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELD 604
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 206/459 (44%), Gaps = 41/459 (8%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV--DI 237
NS + + A ++F + RD+VSW II + N +A+ L+ M V
Sbjct: 38 NSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPA 97
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ + V+ +C N G+S+HA +K +L VFVGS+L+D Y + +E +
Sbjct: 98 VSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSC 157
Query: 298 LCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
FSE+ +N V+W A+I G + E+ + FTF+ L++ +
Sbjct: 158 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLR 217
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ Q+H +I G++ +V SL T Y + G + D L
Sbjct: 218 QVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLC------------------ 259
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
L + D+VSW +I A G ++ +E F MR +++ P+
Sbjct: 260 --------------LFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQ 305
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF ++ SAC+ L L G LH + + S + V N ++ MY CG + S+ +F
Sbjct: 306 TFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLS-VSNSMMKMYSTCGKLDSASVLFQG 364
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
M R++I+W+ +I GF + A + F M G KP AL ++L+ + ++ EG
Sbjct: 365 MRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVL-EG 423
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ +G+E ++++ + G++KEA KI
Sbjct: 424 GRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKI 462
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
+ C ++ S L ++KT I TF N + G++ + ++F++M R++++WT
Sbjct: 13 RFCTASI-SLLEKPVEKT--IQVVTFDTNSHLRSLINAGNLRVARQVFDKMPHRDIVSWT 69
Query: 543 ALISALGLNGFAQRALEKFREMEFL--GFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
A+I + A+ F M + PD + VL AC + G L
Sbjct: 70 AIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSVVLKACGQSSNIAYGESL----- 124
Query: 601 RSYGVEPEMDHY----HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+Y V+ + ++D+ R G ++++ ++ + MPF NA+ W + G
Sbjct: 125 HAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPF-RNAVTWTAIITG 177
>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 765
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 151/498 (30%), Positives = 253/498 (50%), Gaps = 31/498 (6%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
IH ++K G + +++ LV +Y +C + A+++F + R+ V+W ++ ++
Sbjct: 95 IHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSM 154
Query: 223 FGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
A+ L+ M + +P+ T +N+C L + LG+ +HA +IK ++ D +G+
Sbjct: 155 PKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGN 214
Query: 282 ALVDFYAKCD-NLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS---IFLLIELLQLG 337
AL Y KC LE F I K+++SW A I K +F+ + L ++
Sbjct: 215 ALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQ 274
Query: 338 YRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
+PNE+T + L + L Q+H L ++GYE+ V SL+ Y K G I +A
Sbjct: 275 VQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQ 334
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
+N V +IAG + +L + ++ ++ I
Sbjct: 335 RLFKGMNDVNLVTWNAMIAGHAQ-----------MMELSKDNLSAYQKGI---------- 373
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
E L LF + + + PD +TF S+LS CSK+ L G +H KT +S D V + +
Sbjct: 374 EALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLS-DVVVGSSM 432
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
I+MY KCGSI + K+F EM+ R +I WT +I+ +G++++AL F +M+ +G +P+
Sbjct: 433 INMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNL 492
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
V + VL+AC G+V E FE M + Y ++P MDHY C+VD+LVR G ++EA +I
Sbjct: 493 VTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIK 552
Query: 634 TMPFPPNALIWRTFLEGC 651
M + + IW + GC
Sbjct: 553 KMDYKASEFIWSNLIVGC 570
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 135/539 (25%), Positives = 254/539 (47%), Gaps = 52/539 (9%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCE-L 132
D F+ + L+ +Y + G ++ VF+ M R++ V W +++ + ++ + + LF E L
Sbjct: 107 DPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEML 166
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG- 191
+ SE + + ++ ++ L+ GEQ+H +IK D++ + N+L ++Y +C G
Sbjct: 167 LHSECYPSNYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGK 226
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD--IVFPNQTTFVYVI 249
+ F+ ++ +DV+SW I A E K + +++ M +D V PN+ T +
Sbjct: 227 LEVGLTAFRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSAL 286
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
+ C ++ LG +HA K E ++ V ++L+ Y KC + A F +++ N+V
Sbjct: 287 SQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLV 346
Query: 310 SWNALILGYA-----SKSSPTSIFLLIELLQL-------GYRPNEFTFSHVLRSSLAFQL 357
+WNA+I G+A SK + ++ IE L L G +P+ FTFS VL S+ ++
Sbjct: 347 TWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVL--SVCSKM 404
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+ L E E + + K+G +SD VV + + +YN+
Sbjct: 405 MAL---------EQGEQIHARTI----KTGFLSD-------------VVVGSSMINMYNK 438
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G K+ ++ ++ W +I A +G K+ L LF+ M+ I P+ TFV +
Sbjct: 439 CGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGV 498
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
LSAC + + +++K I D +VC L+DM + G + + + +M
Sbjct: 499 LSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVC--LVDMLVRLGQVQEAFDLIKKMDY 556
Query: 536 R-NVITWTALISALGLNGFAQ---RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + W+ LI G + A EK ++ + ++ L A ++A R+ + R
Sbjct: 557 KASEFIWSNLIVGCLSQGNLELGCDAAEKLLSLKPKDTETYKLLLNAYVSAGRYDDVSR 615
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 171/347 (49%), Gaps = 36/347 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI--NRGFEPTQFTFGGLLS-CDSLNPVE 57
+ +++V+S+ + ISA G +R+F+ M+ +P ++T LS C + +E
Sbjct: 237 IKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLE 296
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G Q+ A K G + ++ V +LL LY + GC+ E +F+ M +LVTWN++++
Sbjct: 297 LGIQVHALCTKLG-YESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIA-- 353
Query: 117 GKHGFVE-------------DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI 163
G +E + + LF +L RS + +F V+ S LE GEQI
Sbjct: 354 GHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQI 413
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H IK GF +++V +S++NMY +C I A K+F ++ IR ++ W T+I A+
Sbjct: 414 HARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWS 473
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSC--AGLQN------SILGKSIHAKVIKNALEC 275
+AL L+ M + + PN TFV V+++C AG+ N I+ K K + + C
Sbjct: 474 KQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVC 533
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNK-NIVSWNALILGYASK 321
LVD + ++ A ++ K + W+ LI+G S+
Sbjct: 534 -------LVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQ 573
>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 172/571 (30%), Positives = 265/571 (46%), Gaps = 76/571 (13%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
QI +IK G D + V+ +L+++Y + + A F + IRDVVSWN +I + +
Sbjct: 463 QIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNG 522
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
ALEL+++M P QTT V ++ SC L+ GKSIH IK+ L D V +
Sbjct: 523 YDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKN 582
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRP 340
AL YAKC +LE A F E+ +K++VSWN +I Y ++F+ ++ G
Sbjct: 583 ALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEV 642
Query: 341 NEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM-------------------- 380
++ T + ++ + +HC I++G + V+ SL+
Sbjct: 643 SQVTIMSLPSANANPE--SIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLP 700
Query: 381 -----------TSYAKSG---LISDALAFVTALNI-PRAVVPANIIAGI----------- 414
TSYA++G L+ ++ + + LN+ P +V +I+ GI
Sbjct: 701 QKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHV 760
Query: 415 -----------------------YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
Y++ L S + ++SWN VI+ C G
Sbjct: 761 FHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGR 820
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+ELF M+ PD T SLLS CS+L L G LH I + ++ D FV
Sbjct: 821 ASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMED-FVGT 879
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
LI MY KCGSI + ++F + + TW A+IS GF +AL + EM+ G +P
Sbjct: 880 ALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQGVEP 939
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D++ + VL AC HGGL+ EG F+ M + Y + P + H C+V LL R G +EA
Sbjct: 940 DKITFLGVLAACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEEALLF 999
Query: 632 ITTMPFPPNALIWRTFLEGC---QRCRIAKY 659
I M P++ +W FL C Q ++ +Y
Sbjct: 1000 IKNMEKEPDSAVWGAFLSACCIHQEVKLGEY 1030
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 154/597 (25%), Positives = 275/597 (46%), Gaps = 63/597 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
MP R+VVS+N++I YSR GY AL +F+ M+ GF P Q T GLL SC L V +G
Sbjct: 503 MPIRDVVSWNALICGYSRNGYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQG 562
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +K+GL D V AL +Y + G L+ +FE+M KS+V+WN+++ +G+
Sbjct: 563 KSIHGFGIKSGLHL-DPQVKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQ 621
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF ++ MF+F ++ + V +++ + + + +N E IH IK G + V
Sbjct: 622 NGFFDEAMFVFKRMIGAGVEVSQVTIMSLPSANANP------ESIHCYTIKVGLADDASV 675
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SL+ MY + AE ++ + +++VS II + AE+ N G +E + +M +
Sbjct: 676 VTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNM 735
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ + +++ A + +G H IK+ L+ V + L+ Y+K +N+E
Sbjct: 736 KPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFG 795
Query: 299 CFSEISNKNIVSWNALILG--YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
FS + K ++SWN++I G A ++S +I L ++ G P+ T + +L
Sbjct: 796 LFSGMHEKPLISWNSVISGCVQAGRAS-HAIELFCQMKMHGCNPDAITIASLLSGCSQLG 854
Query: 357 LLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
LQ LH I+R E ++V +L+ Y K G I A
Sbjct: 855 YLQFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHA-------------------- 894
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
++ + +P + +WN +I+ + G + L + M+ + PD
Sbjct: 895 ------------ERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQGVEPDKI 942
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF+ +L+AC+ + G ++ K + C ++ + + G ++
Sbjct: 943 TFLGVLAACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEEALLFIKN 1002
Query: 533 M-TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
M + + W A +SA ++ ++ + E+L K L CR+GGL
Sbjct: 1003 MEKEPDSAVWGAFLSACCIH-------QEVKLGEYLAKK-------LYLLDCRNGGL 1045
>gi|115460348|ref|NP_001053774.1| Os04g0602600 [Oryza sativa Japonica Group]
gi|38344148|emb|CAE01824.2| OSJNBa0041A02.15 [Oryza sativa Japonica Group]
gi|113565345|dbj|BAF15688.1| Os04g0602600 [Oryza sativa Japonica Group]
gi|125549608|gb|EAY95430.1| hypothetical protein OsI_17272 [Oryza sativa Indica Group]
Length = 804
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 183/666 (27%), Positives = 327/666 (49%), Gaps = 58/666 (8%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQ---FTFGGLLSC--DSLNPVEGAQLQAS 64
N+++ AY+ E+ALR++ + + P + +T+ L+ S G + A
Sbjct: 71 NALLIAYAARALPEEALRLYALLNHAARPPVRSDHYTYSAALTACARSRRLRLGRSVHAH 130
Query: 65 VLKNGLFCAD-AFVGTALLGLYG-----RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+L+ D A + +LL LY R +D V +F+ MP++++V+WN++ + K
Sbjct: 131 MLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVK 190
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY--EL 176
G ++ + LF ++ T SFV + + D + Q++GL++K G +Y +L
Sbjct: 191 TGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVAD-DPSWPFQLYGLLVKYGVEYINDL 249
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V +S ++M+ + + SA ++F ++ WNT+I ++ F +A++L+ ++
Sbjct: 250 FVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGS 309
Query: 237 IVFP-NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC-DVFVGSALVDFYAKCDNLE 294
P + TF+ + + + Q+ LG+ +H +IK V +G+ALV Y++C N++
Sbjct: 310 REVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQ 369
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSL 353
A F + K+IV+WN ++ + LL+ E+ + G+ + T + VL +S
Sbjct: 370 TAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASS 429
Query: 354 AFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL-AFVTALNIPRAVVPA 408
LQ+ H +IR G E E + L+ YAKSG + A F + N R
Sbjct: 430 NTGDLQIGKQAHGYLIRHGIEG-EGLESYLIDMYAKSGRVEMAQRVFDSFKNAKR----- 483
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
D V+WN +IA +G ++ + +F+ M A +
Sbjct: 484 --------------------------DEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLE 517
Query: 469 PDNYTFVSLLSACSKLCN-LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P + T S+L AC + + G +H + + ++ FV LIDMY KCG I ++
Sbjct: 518 PTSVTLASVLPACDPVGGGVYSGKQIHCFAVR-RCLDTNVFVGTALIDMYSKCGEITTAE 576
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+F MT ++ +T+T +IS LG +GF ++AL F M+ G KPD V ++ ++AC + G
Sbjct: 577 NVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSG 636
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN-ALIWRT 646
LV EG+ L+ M+ S+G+ H+ CV DLL + G ++EA + I + N IW +
Sbjct: 637 LVDEGLALYRSMD-SFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGS 695
Query: 647 FLEGCQ 652
L C+
Sbjct: 696 LLASCK 701
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 145/583 (24%), Positives = 276/583 (47%), Gaps = 53/583 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCD-SLNPVEGA 59
MP RNVVS+N++ Y + G ++AL +F+ M+ GF PT +F + + +P
Sbjct: 173 MPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVADDPSWPF 232
Query: 60 QLQASVLKNGL-FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL ++K G+ + D FV ++ + ++ G + VF+ +K+ WN++++ + +
Sbjct: 233 QLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQ 292
Query: 119 HGFVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL- 176
+G + + LF +++ S EV L +F+ + S QD+ G+Q+HG +IK G L
Sbjct: 293 NGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIK-GMHRTLP 351
Query: 177 -LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
++ N+LV MY +C + +A +F + +D+V+WNT++ A +++ + L L M
Sbjct: 352 VILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQK 411
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ T V+++ + + +GK H +I++ +E + + S L+D YAK +E
Sbjct: 412 SGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGE-GLESYLIDMYAKSGRVEM 470
Query: 296 AHLCFSEISN--KNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRS- 351
A F N ++ V+WNA+I GY P +I + +L+ G P T + VL +
Sbjct: 471 AQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPAC 530
Query: 352 ----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ Q+HC +R + +V +L+ Y+K G I+ A
Sbjct: 531 DPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTA--------------- 575
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
N+ G+ ++ V++ +I+ +G K+ L LF M+ +
Sbjct: 576 ENVFGGMTGKS-----------------TVTYTTMISGLGQHGFGKKALALFNSMQEKGL 618
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD TF+S +SAC+ + G +L+ + I ++ C + D+ K G + +
Sbjct: 619 KPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHC-CVADLLAKAGRVEEAY 677
Query: 528 KIFNEMTDRN--VITWTALIS---ALGLNGFAQRALEKFREME 565
+ + + V W +L++ A G A+ +K ++E
Sbjct: 678 EFIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLDIE 720
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 262/522 (50%), Gaps = 45/522 (8%)
Query: 142 SSFVGVIHGLSNE---QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
SS + H L+N + L+ QIH ++ L N+L+ +Y +C I +
Sbjct: 95 SSVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLL 154
Query: 199 FKDVE--IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
F +VV+W T+I L+ S +AL + RM ++PN TF ++ +CA
Sbjct: 155 FNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAA 214
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
G+ IHA + K+ D FV +AL+D YAKC ++ A F E+ ++N+VSWN++I+
Sbjct: 215 LLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIV 274
Query: 317 GYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYEN 371
G+ +K +I + E+L LG P++ + S VL + L Q+H I++ G
Sbjct: 275 GFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVG 332
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
YV SL+ Y K GL DA KL
Sbjct: 333 LVYVKNSLVDMYCKCGLFEDA--------------------------------TKLFCGG 360
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
D+V+WN++I C ++++ F+ M + PD ++ SL A + + L G+
Sbjct: 361 GDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGT 420
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H + KT + ++ + + L+ MYGKCGS+ + ++F E + NV+ WTA+I+ +
Sbjct: 421 MIHSHVLKTGHVK-NSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQH 479
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G A A++ F EM G P+ + ++VL+AC H G + +G + F M + ++P ++H
Sbjct: 480 GCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEH 539
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
Y C+VDLL R G L+EA + I +MPF P++L+W L C +
Sbjct: 540 YACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGK 581
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 141/592 (23%), Positives = 268/592 (45%), Gaps = 90/592 (15%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS--LVTWNSIVS 114
Q+ + ++ + A + T LL LY + G + + +F P S +VTW ++++
Sbjct: 115 HATQIHSQLVTTNNHASLANINTLLL-LYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLIN 173
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + F + + + +F ++ ++ L G+QIH L+ K+ F
Sbjct: 174 QLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLN 233
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ VA +L++MY +C + AE +F ++ R++VSWN++I +++ +G+A+ ++
Sbjct: 234 DPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVF--RE 291
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
V + P+Q + V+++CAGL GK +H ++K L V+V ++LVD Y KC E
Sbjct: 292 VLSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFE 351
Query: 295 GAHLCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F ++++V+WN +I+G + ++ + +++ G P+E ++S + +S
Sbjct: 352 DATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASA 411
Query: 354 AFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ L +H +++ G+ + SL+T Y K G + DA
Sbjct: 412 SIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQ--------------- 456
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
++ T ++N +V W +I +G E ++LF+ M + P
Sbjct: 457 ----VFRETKEHN-------------VVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVP 499
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ TFVS+LSACS G I K
Sbjct: 500 EYITFVSVLSACS------------------------------------HTGKIDDGFKY 523
Query: 530 FNEMTDRNVIT-----WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
FN M + + I + ++ LG G R E R +E + F+PD + A+L AC
Sbjct: 524 FNSMANVHNIKPGLEHYACMVDLLGRVG---RLEEACRFIESMPFEPDSLVWGALLGACG 580
Query: 585 HGGLVREGMELFERMNRSYGVEPEMD-HYHCVVDLLVRYGHLKEAEKIITTM 635
V G E+ ER+ + +EP+ +Y + ++ +R+G L+EA+++ M
Sbjct: 581 KHANVEMGREVAERL---FKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLM 629
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 223/489 (45%), Gaps = 50/489 (10%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGA 59
P NVV++ ++I+ SR AL F M G P FTF +L + + EG
Sbjct: 161 PSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQ 220
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ A + K+ F D FV TALL +Y + G + +VF++MP ++LV+WNS++ F K+
Sbjct: 221 QIHALIHKH-CFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKN 279
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ +F E++ + + S V+ + +L+FG+Q+HG ++K G + V
Sbjct: 280 KLYGRAIGVFREVL--SLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVK 337
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
NSLV+MY +C A K+F RDVV+WN +I NF +A + M + V
Sbjct: 338 NSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVE 397
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P++ ++ + ++ A + G IH+ V+K + + S+LV Y KC ++ A+
Sbjct: 398 PDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQV 457
Query: 300 FSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F E N+V W A+I + + +I L E+L G P TF
Sbjct: 458 FRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFV------------ 505
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL----NIPRAVVPANIIAGI 414
S++++ + +G I D + ++ NI + + +
Sbjct: 506 -------------------SVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDL 546
Query: 415 YNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDY---KEVLELFKYMRAARIYPD 470
R G+ E + + + PD + W ++ AC + + +EV E R ++ PD
Sbjct: 547 LGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAE-----RLFKLEPD 601
Query: 471 NYTFVSLLS 479
N LLS
Sbjct: 602 NPGNYMLLS 610
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 29/260 (11%)
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERP--DIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
N + +Y + G + T+ L + P ++V+W +I + + + L F MR
Sbjct: 136 NTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTG 195
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
IYP+++TF ++L AC+ L+ G +H LI K ++ D FV L+DMY KCGS+ +
Sbjct: 196 IYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLN-DPFVATALLDMYAKCGSMLLA 254
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-- 584
+F+EM RN+++W ++I N RA+ FRE+ LG PD+V++ +VL+AC
Sbjct: 255 ENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGL 312
Query: 585 ---------HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
HG +V+ G+ + S +VD+ + G ++A K+
Sbjct: 313 VELDFGKQVHGSIVKRGLVGLVYVKNS------------LVDMYCKCGLFEDATKLFCGG 360
Query: 636 PFPPNALIWRTFLEGCQRCR 655
+ + W + GC RCR
Sbjct: 361 G-DRDVVTWNVMIMGCFRCR 379
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 132/256 (51%), Gaps = 7/256 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP RN+VS+NS+I + + A+ +F +++ G P Q + +LS C L ++ G
Sbjct: 261 MPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFG 318
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWN-SIVSIFG 117
Q+ S++K GL +V +L+ +Y + G ++ +F + +VTWN I+ F
Sbjct: 319 KQVHGSIVKRGLV-GLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFR 377
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
F + C + F ++R V E+S+ + H ++ L G IH V+K G
Sbjct: 378 CRNFEQACTY-FQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSR 436
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+++SLV MY +C + A ++F++ + +VV W +I + +A++L+ M +
Sbjct: 437 ISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEG 496
Query: 238 VFPNQTTFVYVINSCA 253
V P TFV V+++C+
Sbjct: 497 VVPEYITFVSVLSACS 512
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 153/494 (30%), Positives = 254/494 (51%), Gaps = 38/494 (7%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
+QIH V+K E V L+ + C + A +F ++ DV+ +NT+I A +
Sbjct: 34 KQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRN 93
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
A ++ M V + T+ +++ +C+G + + IHA+V K D+FV
Sbjct: 94 SEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVP 153
Query: 281 SALVDFYAKC--DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY 338
++L+D Y KC D + A F ++ ++ VSWN++I G L+++ +LG
Sbjct: 154 NSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGG------------LVKVGELGE 201
Query: 339 RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
F R ++++ +++ Y K+G ++ A
Sbjct: 202 ARRLFD-EMPERDTVSWN---------------------TILDGYVKAGEMNAAFELFEK 239
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
+ V + ++ G Y++ G + L ++ ++V W I+I+ A G K+ + L
Sbjct: 240 MPARNVVSWSTMVLG-YSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINL 298
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYG 518
+ M A + D+ T +S+LSAC+ L LG +H I++T S T V N LIDMY
Sbjct: 299 YNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCS-TPVSNALIDMYA 357
Query: 519 KCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
KCGS+ +++ IF+ M ++V++W A+I L ++G ++AL+ F M+ GF PD+V +
Sbjct: 358 KCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVG 417
Query: 579 VLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFP 638
VL AC H G V EG+ F M R YGV PE++HY C+VDLL R G LKEA +++ +MP
Sbjct: 418 VLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLE 477
Query: 639 PNALIWRTFLEGCQ 652
PNA+IW T L C+
Sbjct: 478 PNAIIWGTLLGACR 491
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 133/538 (24%), Positives = 240/538 (44%), Gaps = 68/538 (12%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L C SLN V+ Q+ A VLK L ++FVG L+ + + V+VF + +
Sbjct: 24 LHRCSSLNQVK--QIHAQVLKANLH-RESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDV 80
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
+ +N+++ ++ +F E+ S V ++ ++ S + + E IH
Sbjct: 81 LLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQ 140
Query: 167 VIKNGFDYELLVANSLVNMYFQCA--GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
V K GF ++ V NSL++ YF+C G+ +A K+F+ + RD VSWN++IG L + G
Sbjct: 141 VEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELG 200
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC-------DV 277
+A L+ M P + T + N+IL + A + A E +V
Sbjct: 201 EARRLFDEM------PERDTVSW---------NTILDGYVKAGEMNAAFELFEKMPARNV 245
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQL 336
S +V Y+K +++ A + F ++ KN+V W +I GYA K + +I L ++ +
Sbjct: 246 VSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEA 305
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
G + ++ T +L + LL L H I R ++ V +L+ YAK G + +A
Sbjct: 306 GLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENA 365
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
L+ + + R D+VSWN +I A +G
Sbjct: 366 LS--------------------------------IFHGMVRKDVVSWNAIIQGLAMHGHG 393
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
++ L+LF M+ PD TFV +L AC+ + G +++ + +
Sbjct: 394 EKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGC 453
Query: 513 LIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLN---GFAQRALEKFREMEF 566
++D+ G+ G + + ++ + M + N I W L+ A ++ G A+ ++ + E
Sbjct: 454 MVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSEL 511
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 152/330 (46%), Gaps = 12/330 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M +R+ VS+NS+I + G + +A R+F M R G + +N
Sbjct: 178 MAERDTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNA----- 232
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
A L + + + ++ Y + G +D +F+ MP K+LV W ++S + + G
Sbjct: 233 --AFELFEKMPARNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKG 290
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+D + L+ ++ + + + + + ++ + L G+++H + + F V+N
Sbjct: 291 LAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSN 350
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L++MY +C + +A +F + +DVVSWN II LA + KAL+L+ RM + P
Sbjct: 351 ALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVP 410
Query: 241 NQTTFVYVINSC--AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA-H 297
++ TFV V+ +C AG + L HA + +V +VD + L+ A
Sbjct: 411 DKVTFVGVLCACTHAGFVDEGL-HYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFR 469
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSI 327
L S N + W L LG S T +
Sbjct: 470 LVHSMPLEPNAIIWGTL-LGACRMHSATGL 498
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 118/272 (43%), Gaps = 14/272 (5%)
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
A V N+ R + ++ Q V + +Q++ PD++ +N +I A N +
Sbjct: 38 AQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPL 97
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
+F M+ + + DN+T+ LL ACS + + +H ++K D FV N L
Sbjct: 98 LAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMG-FCLDIFVPNSL 156
Query: 514 IDMYGKCG--SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
ID Y KCG + ++ K+F M +R+ ++W ++I L G A F EM +
Sbjct: 157 IDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMP----ER 212
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D V+ +L G + ELFE+M V + +V + G + A +
Sbjct: 213 DTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVS-----WSTMVLGYSKAGDMDMARIL 267
Query: 632 ITTMPFPPNALIWRTFLEGCQRCRIAKYDTLN 663
MP N + W + G +AK D +N
Sbjct: 268 FDKMPV-KNLVPWTIMISGYAEKGLAK-DAIN 297
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 114/237 (48%), Gaps = 5/237 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEG-- 58
MP +N+V + +IS Y+ G +DA+ ++ M G + T +LS +++ + G
Sbjct: 271 MPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLG 330
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ AS+ + C+ V AL+ +Y + G L+ +S+F M RK +V+WN+I+
Sbjct: 331 KRVHASIERTRFKCSTP-VSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAM 389
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG-EQIHGLVIKNGFDYELL 177
HG E + LF + + +FVGV+ ++ ++ G H + G E+
Sbjct: 390 HGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVE 449
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRM 233
+V++ + + A ++ + + + + W T++GA G A E++ R+
Sbjct: 450 HYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRL 506
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/457 (31%), Positives = 237/457 (51%), Gaps = 50/457 (10%)
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
TF VI +CA + + ILGK+IH V++ + + VG+ L+ YAK + A F +
Sbjct: 44 TFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLFDRM 103
Query: 304 SNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVL----RSSLAFQLL 358
S ++ +SWN ++ YA + + ++ G PN T++ ++ RS + +
Sbjct: 104 SVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISSYARSGWHEEAM 163
Query: 359 QL-----------------------------------HCLIIRMGYENYEYVLGSLMTSY 383
+L H ++ G+E Y +V +L+ Y
Sbjct: 164 ELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVY 223
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER--------PD 435
K G ++ A + +++ N + + G +E +++ SQLER P+
Sbjct: 224 GKHGDVNGAWNLFLEMK-NKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPN 282
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
+VSW+ +I A G KE LELF+ M+ A+I + T ++LS C++L L LG +HG
Sbjct: 283 VVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHG 342
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
+ + ++ ++ V N L++MY KCG + IF + +++I+W ++I+ G++G
Sbjct: 343 HVVRA-VMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGM 401
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
ALE F +M LGFKPD V +AVL++C H GLV EG LF++M + Y +EP+M+HY C+
Sbjct: 402 NALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACM 461
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
VDLL R G L+EA +I+ MP PNA +W L C+
Sbjct: 462 VDLLGRAGLLREASEIVKNMPVAPNACVWGALLNSCR 498
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 196/448 (43%), Gaps = 70/448 (15%)
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
G+ IHG V++ GF L V N L+ MY + + A +F + +R +SWNT++ A A
Sbjct: 60 LGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLFDRMSVRSYISWNTMVSAYA 119
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINS--------------------------- 251
+ + ALE++ RM + + PN T+ +I+S
Sbjct: 120 FNYDCNGALEIFQRMESEGMEPNLVTWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGE 179
Query: 252 --------CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
CA L + K IH +K E FV SAL+ Y K ++ GA F E+
Sbjct: 180 ALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEM 239
Query: 304 SNKNIVSWNALILGYASKS-SPTSIFLLIELLQLG----YRPNEFTFSHVL-------RS 351
NK++ SWNALI +A ++ + +L + G RPN ++S ++ R
Sbjct: 240 KNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGRE 299
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP----RAVVP 407
A +L + RM + +L + +T L ++ A I RAV+
Sbjct: 300 KEALELFR------RM---QHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMV 350
Query: 408 ANIIAG-----IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
NI+ G +Y + G E + + ER D++SWN +I +G LE F M
Sbjct: 351 NNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQM 410
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSL-HGLIKKTEIISS-DTFVCNMLIDMYGKC 520
PD TFV++LS+CS + G L ++KK I + + C ++D+ G+
Sbjct: 411 IKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYAC--MVDLLGRA 468
Query: 521 GSIGSSVKIFNEM-TDRNVITWTALISA 547
G + + +I M N W AL+++
Sbjct: 469 GLLREASEIVKNMPVAPNACVWGALLNS 496
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 168/358 (46%), Gaps = 49/358 (13%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQL 61
+ N+V++ S+IS+Y+R G+ E+A+ +F M +G E + ++S C L A++
Sbjct: 140 EPNLVTWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKI 199
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
G F +FV +AL+ +YG+HG ++ ++F +M KSL +WN++++ + G
Sbjct: 200 IHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGL 259
Query: 122 VEDCMFLFCELVRS----EVALTESSFVGVIHGLSNE----------------------- 154
++ + +F +L RS + S+ +I G +++
Sbjct: 260 CDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAV 319
Query: 155 ------------QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
L G +IHG V++ +LV N LVNMY +C + +F+
Sbjct: 320 TISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKT 379
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC--AGLQNSIL 260
E +D++SWN++I ALE + +M P+ TFV V++SC +GL +
Sbjct: 380 ERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHE-- 437
Query: 261 GKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
G+ + +++K +E + + +VD + L A SEI V+ NA + G
Sbjct: 438 GRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREA----SEIVKNMPVAPNACVWG 491
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
+ MR D +TF ++ AC+ + + LG ++HG + + S V N LI MY K
Sbjct: 31 RRMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMG-FQSHLHVGNELIGMYAK 89
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
G + + +F+ M+ R+ I+W ++SA N ALE F+ ME G +P+ V ++
Sbjct: 90 LGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSL 149
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+++ G E MELF M R GVE + V+ + G A+ I
Sbjct: 150 ISSYARSGWHEEAMELFGLM-RMKGVEVSGEALAVVISICADLGAFVRAKII 200
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 153/453 (33%), Positives = 234/453 (51%), Gaps = 23/453 (5%)
Query: 206 DVVSWNTIIGALAESENFGKALELYLR-MSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+ SWN I +SEN +A+ LY R + D P+ T+ + +CA L +G I
Sbjct: 42 NTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEI 101
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-S 323
V+ + D+FV +A++ C +L+GA F + +++VSWN++I GY + +
Sbjct: 102 LGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWA 161
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSL 379
++ E+ G +P+E T V+ S + L L HC I G + + +L
Sbjct: 162 YEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANAL 221
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
M Y K G + A ++ N+T + T L ++ D+V W
Sbjct: 222 MDMYMKCGNLESARKLFDSMT---------------NKT-MVSWTTMLFDEMPDKDVVPW 265
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
N +I H KE L LF M+A I PD T VS LSACS+L L +G +H I+K
Sbjct: 266 NAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK 325
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
E+ S + + LIDMY KCG I ++++F E+ RN +TWTA+IS L L+G A A+
Sbjct: 326 HEL-SLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIA 384
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
F EM PD V + +L+AC HGGLV EG + F +M+ + + P++ HY C+VDLL
Sbjct: 385 YFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLL 444
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G L+EAE++I +MP +A++W C+
Sbjct: 445 GRAGLLEEAEELIKSMPIEADAVVWGALFFACR 477
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 195/430 (45%), Gaps = 49/430 (11%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
+ G +I G V+ GFD ++ V+N+++++ C + A KMF +RD+VSWN++I
Sbjct: 95 IRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMING 154
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+AL Y M V+ + P++ T + V++SCA L++ LG+ H + +N L+
Sbjct: 155 YVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLT 214
Query: 277 VFVGSALVDFYAKCDNLEGAH----------------LCFSEISNKNIVSWNALILGYA- 319
V + +AL+D Y KC NLE A + F E+ +K++V WNA+I GY
Sbjct: 215 VPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVH 274
Query: 320 SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
+ ++ L E+ + P+E T L + L +G
Sbjct: 275 ANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALD----------------VGIW 318
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+ Y + +S +A TAL +Y + G+ + +++ +L + ++W
Sbjct: 319 IHHYIEKHELSLNVALGTAL------------IDMYAKCGKITKAIQVFQELPGRNSLTW 366
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+I+ A +G+ + F M + PD TF+ LLSAC + G +
Sbjct: 367 TAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSS 426
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQ 555
+S + ++D+ G+ G + + ++ M + + + W AL A ++G +
Sbjct: 427 KFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGE 486
Query: 556 RALEKFREME 565
RA K +M+
Sbjct: 487 RAASKLLQMD 496
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 184/367 (50%), Gaps = 21/367 (5%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
N S+N I + +A+ ++ ++ G +P +T+ L +C L+ + G+++
Sbjct: 42 NTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEI 101
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
VL G F +D FV A++ L G LD +F+ + LV+WNS+++ + + G+
Sbjct: 102 LGHVLHLG-FDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGW 160
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + + E+ + E + +GV+ + +DL+ G + H + +NG + +AN+
Sbjct: 161 AYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANA 220
Query: 182 LVNMYFQCAGIWSAEK----------------MFKDVEIRDVVSWNTIIGALAESENFGK 225
L++MY +C + SA K +F ++ +DVV WN +IG + +
Sbjct: 221 LMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKE 280
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
AL L+ M + P++ T V +++C+ L +G IH + K+ L +V +G+AL+D
Sbjct: 281 ALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALID 340
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFT 344
YAKC + A F E+ +N ++W A+I G A ++ +I E++ P+E T
Sbjct: 341 MYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVT 400
Query: 345 FSHVLRS 351
F +L +
Sbjct: 401 FLGLLSA 407
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 171/395 (43%), Gaps = 51/395 (12%)
Query: 276 DVFVGSALVDFYAKCD--NLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIE 332
D F S L+ F A + +L+ N N SWN I G+ +P ++ L
Sbjct: 9 DGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKR 68
Query: 333 LLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
+LQ G +P+ +T+ + ++ L IRMG S+
Sbjct: 69 VLQCDGTKPDNYTYPLLFKACARLSL-------IRMG---------------------SE 100
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
L V L + +N + + G + K+ + D+VSWN +I G
Sbjct: 101 ILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGW 160
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
E L ++ M+ I PD T + ++S+C++L +L LG H I++ + + + N
Sbjct: 161 AYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLT-VPLAN 219
Query: 512 MLIDMYGKCGSIGSSVK----------------IFNEMTDRNVITWTALISALGLNGFAQ 555
L+DMY KCG++ S+ K +F+EM D++V+ W A+I +
Sbjct: 220 ALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGK 279
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
AL F EM+ + PD V +++ L+AC G + G+ + + + + + + +
Sbjct: 280 EALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK-HELSLNVALGTAL 338
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+D+ + G + +A ++ +P N+L W + G
Sbjct: 339 IDMYAKCGKITKAIQVFQELP-GRNSLTWTAIISG 372
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 131/267 (49%), Gaps = 19/267 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
R++VS+NS+I+ Y R G+ +AL + M G +P + T G++S C L ++ G +
Sbjct: 143 RDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRES 202
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDE----------------VVSVFEDMPRKS 105
+ +NGL + AL+ +Y + G L+ +F++MP K
Sbjct: 203 HCYIEENGLKLT-VPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKD 261
Query: 106 LVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHG 165
+V WN+++ + ++ + LF E+ + E + V + S L+ G IH
Sbjct: 262 VVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHH 321
Query: 166 LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
+ K+ + + +L++MY +C I A ++F+++ R+ ++W II LA N
Sbjct: 322 YIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHG 381
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSC 252
A+ + M + V P++ TF+ ++++C
Sbjct: 382 AIAYFSEMIDNSVMPDEVTFLGLLSAC 408
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+P RN +++ +IIS + G A+ F MI+ P + TF GLLS C VE
Sbjct: 358 LPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEG 417
Query: 60 QLQASVLKNGLFCADAFVG-TALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
+ S + + + + ++ L GR G L+E + + MP V W ++
Sbjct: 418 RKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACR 477
Query: 118 KHGFV 122
HG V
Sbjct: 478 IHGNV 482
>gi|225457865|ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
[Vitis vinifera]
Length = 711
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 160/577 (27%), Positives = 283/577 (49%), Gaps = 24/577 (4%)
Query: 85 YGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
YG+ CLD+ +FE+MP++ +WN++++ + + G E ++LF + R + E +F
Sbjct: 105 YGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITF 164
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
V+ + L +QIHGL++K GF + +++ +SLV++Y +C + A +MF ++E
Sbjct: 165 ASVLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIEN 224
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+ +SWN I+ E N +A+ ++ +M + P TF + +C+ + G I
Sbjct: 225 PNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQI 284
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
H I+ + D V S+L+D YAKC +LE A F S+KN++SW +++ GYA
Sbjct: 285 HGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQT 344
Query: 325 TSIFLLIELLQ----LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM 380
+L + + + + ++H + A + + ++R ++ ++V L+
Sbjct: 345 REARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFV----FLMRKATQDIDHVTVGLI 400
Query: 381 ------TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER- 433
S +SG F+ + + N + +Y + G T Q+
Sbjct: 401 LNVCAGLSDVESG--KQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHW 458
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
D +SWN ++ + A +G +E + +F M+ P +T +LLSAC+ + L G +
Sbjct: 459 RDRISWNALLTSHARHGLSEEAMTIFGEMQ-WETTPSKFTLGTLLSACANIFALEQGKQI 517
Query: 494 HGLIKKT--EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
HG + + EI D L+DMY KC + ++K+F E R++I W ++I N
Sbjct: 518 HGFMIRNGYEI---DVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNSMILGCCHN 574
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G + L F ME G KPD + +L C GL G E F M+ Y + P ++H
Sbjct: 575 GRGRDVLGLFGLMEEEGVKPDHITFQGILLGCICEGLAGLGTEYFNSMSNKYCIIPRLEH 634
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPN-ALIWRTF 647
Y +++L R+G + E E I MPF P A++ R F
Sbjct: 635 YESMIELYGRHGFMDELEDFIKRMPFEPTVAMLTRVF 671
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/482 (29%), Positives = 251/482 (52%), Gaps = 11/482 (2%)
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ + N + Y +C+ + A ++F+++ RD SWN +I A A+ KAL L+ RM+
Sbjct: 95 IFLLNRAIETYGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNR 154
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
++ N+ TF V+ SCA + L K IH ++K +V +GS+LVD Y KC +
Sbjct: 155 LGIWANEITFASVLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSD 214
Query: 296 AHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F EI N N +SWN ++ Y + ++ + ++++ RP FTFS+ L + +
Sbjct: 215 ARRMFDEIENPNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSS 274
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
L Q+H + IR+GY+ E V SL+ YAK G + A + + +I
Sbjct: 275 ISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSI 334
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
++G Y +GQ E L ++ ++SWN ++A H ++E LE MR A D
Sbjct: 335 VSG-YAMSGQTREARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDID 393
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ T +L+ C+ L ++ G +HG I + + S+ FV N L+ MYGKCG++ S+ F
Sbjct: 394 HVTVGLILNVCAGLSDVESGKQVHGFIYRHGLY-SNLFVGNALLHMYGKCGNLRSTRLWF 452
Query: 531 NEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
+M+ R+ I+W AL+++ +G ++ A+ F EM++ P + L +L+AC + +
Sbjct: 453 YQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEMQW-ETTPSKFTLGTLLSACANIFAL 511
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
+G ++ M R+ G E ++ +VD+ + L+ A K+ P + ++W + +
Sbjct: 512 EQGKQIHGFMIRN-GYEIDVVARGALVDMYSKCRCLEYALKVFKEAP-SRDLILWNSMIL 569
Query: 650 GC 651
GC
Sbjct: 570 GC 571
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 160/643 (24%), Positives = 283/643 (44%), Gaps = 115/643 (17%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDS-LNPVEG 58
MP R+ S+N++I+AY++ G E AL +F M G + TF +L SC + L
Sbjct: 121 MPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLS 180
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ ++K G FC + +G++L+ +YG+ + + +F+++ + ++WN IV + +
Sbjct: 181 KQIHGLIVKYG-FCWNVILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLE 239
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ + +F +++R+ + +F + S+ L+ G QIHG+ I+ G+D + +V
Sbjct: 240 MGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVV 299
Query: 179 ANSLVNMYFQCAGIWSAEKMFK-------------------------------DVEIRDV 207
++SL++MY +C + SA ++F+ ++ R V
Sbjct: 300 SSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQTREARVLFDEMPERSV 359
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
+SWN ++ + +ALE M + T ++N CAGL + GK +H
Sbjct: 360 ISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHGF 419
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN-KNIVSWNALILGYASKSSPTS 326
+ ++ L ++FVG+AL+ Y KC NL L F ++S+ ++ +SWNAL+ +A
Sbjct: 420 IYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEE 479
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEYVLGSLMTS 382
+ +Q P++FT +L + Q Q+H +IR GYE G+L+
Sbjct: 480 AMTIFGEMQWETTPSKFTLGTLLSACANIFALEQGKQIHGFMIRNGYEIDVVARGALVDM 539
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
Y+K + AL K+ + D++ WN +
Sbjct: 540 YSKCRCLEYAL--------------------------------KVFKEAPSRDLILWNSM 567
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
I C HNG ++VL LF M + PD+ TF +L C
Sbjct: 568 ILGCCHNGRGRDVLGLFGLMEEEGVKPDHITFQGILLGC--------------------- 606
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT-----WTALISALGLNGFAQRA 557
+C G G + FN M+++ I + ++I G +GF
Sbjct: 607 ------ICE---------GLAGLGTEYFNSMSNKYCIIPRLEHYESMIELYGRHGFMDE- 650
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
LE F ++ + F+P L V AC G R G E++N
Sbjct: 651 LEDF--IKRMPFEPTVAMLTRVFNACSEHGHSRLGKWAAEQLN 691
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/597 (28%), Positives = 286/597 (47%), Gaps = 59/597 (9%)
Query: 101 MPRKSLVTWNSIVSIF-GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF 159
+PR L WNS V F G + + +F EL V + + + D+
Sbjct: 634 LPRNYL-KWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWL 692
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
G +IHG +IK GFD ++ + +L+N Y +C G+ A ++F ++ + + WN I +
Sbjct: 693 GMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQ 752
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
SE K +EL+ +M + T V V+ +C + K IH V + L+ DV +
Sbjct: 753 SEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSL 812
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-----------------SKS 322
+ L+ Y+K LE A F + N+N SWN++I YA S
Sbjct: 813 CNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDM 872
Query: 323 SPTSI---------FL------LIELLQL----GYRPNEFTFSHVLR--SSLAFQLL--Q 359
P + FL ++ +LQ G++PN + + VL+ S L F + +
Sbjct: 873 KPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKE 932
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
H ++R G++ YV SL+ Y K+ + A A + R + N + Y+ G
Sbjct: 933 THGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMK-NRNIFAWNSLVSGYSFKG 991
Query: 420 QYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ + ++LL+Q+E +PD+V+WN +I+ A G ++ P++ +
Sbjct: 992 MFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAF-----------MPNSASIT 1040
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
LL AC+ L L G +H L + I D FV LIDMY K S+ ++ K+F + +
Sbjct: 1041 CLLRACASLSLLQKGKEIHCLSIRNGFI-EDVFVATALIDMYSKSSSLKNAHKVFRRIQN 1099
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+ + +W +I + G + A+ F EM+ +G PD + A+L+AC++ GL+ EG +
Sbjct: 1100 KTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKY 1159
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F+ M Y + P ++HY C+VDLL R G+L EA +I TMP P+A IW L C+
Sbjct: 1160 FDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCR 1216
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 150/635 (23%), Positives = 276/635 (43%), Gaps = 108/635 (17%)
Query: 4 RNVVSFNSIISAY-SRCGYVEDALRMFLYMINRG--FEPTQFTFGGLLSCDSLNPVE-GA 59
RN + +NS + + S G + L +F + +G F+ ++ L +C + + G
Sbjct: 636 RNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVA-LKTCTRVMDIWLGM 694
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ ++K G F D ++ AL+ YGR L++ VF +MP + WN + + +
Sbjct: 695 EIHGCLIKRG-FDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQS 753
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
++ + LF ++ S + ++ V V+ L +QIHG V + G D ++ +
Sbjct: 754 EKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLC 813
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA---------------ESENFG 224
N L++MY + + A ++F +E R+ SWN++I + A ES +
Sbjct: 814 NPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMK 873
Query: 225 --------------------KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+ L + RM + PN ++ V+ + + L +GK
Sbjct: 874 PDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKET 933
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS- 323
H V++N +CDV+VG++L+D Y K +L A F + N+NI +WN+L+ GY+ K
Sbjct: 934 HGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMF 993
Query: 324 PTSIFLLIELLQLGYRPNEFTFSH------------------------VLRSSLAFQLLQ 359
++ LL ++ + G +P+ T++ +LR+ + LLQ
Sbjct: 994 EDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQ 1053
Query: 360 ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+HCL IR G+ +V +L+ Y+KS + +A + I
Sbjct: 1054 KGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNA---------------HKVFRRIQ 1098
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
N+T + SWN +I A G KE + +F M+ + PD TF
Sbjct: 1099 NKT-----------------LASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFT 1141
Query: 476 SLLSACSKLCNLALG-SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+LLSAC + G +I I+ C M +D+ G+ G + + + + M
Sbjct: 1142 ALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCM-VDLLGRAGYLDEAWDLIHTMP 1200
Query: 535 DR-NVITWTALISALGLNG---FAQRALEKFREME 565
+ + W AL+ + ++ FA+ A + ++E
Sbjct: 1201 LKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLE 1235
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 196/425 (46%), Gaps = 12/425 (2%)
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE-NFGKALELYLRMSVD 236
A +L++ Y WSA +F R+ + WN+ + S + LE++ +
Sbjct: 609 AAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGK 668
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V + + + +C + + LG IH +IK + DV++ AL++FY +C LE A
Sbjct: 669 GVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKA 728
Query: 297 HLCFSEISNKNIVSWN-ALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
+ F E+ N + WN A+IL S+ + L ++ + T VL++
Sbjct: 729 NQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKM 788
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L Q+H + R G ++ + L++ Y+K+G + A ++ R N +
Sbjct: 789 GALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSME-NRNTSSWNSM 847
Query: 412 AGIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
Y G N+ L +LE +PDIV+WN +++ +G +EVL + + M+
Sbjct: 848 ISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGF 907
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P++ + S+L A S+L L +G HG + + D +V LIDMY K S+ S+
Sbjct: 908 KPNSSSMTSVLQAISELGFLNMGKETHGYVLRNG-FDCDVYVGTSLIDMYVKNHSLXSAQ 966
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+F+ M +RN+ W +L+S G + AL +ME G KPD V +++ G
Sbjct: 967 AVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG 1026
Query: 588 LVREG 592
R+
Sbjct: 1027 CARKA 1031
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 203/478 (42%), Gaps = 103/478 (21%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQ 62
D +V N +IS YS+ G +E A R+F M NR + S N
Sbjct: 807 DSDVSLCNPLISMYSKNGKLELARRVFDSMENR-------------NTSSWN-------- 845
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP----RKSLVTWNSIVSIFGK 118
+++ Y G L++ S+F ++ + +VTWN ++S
Sbjct: 846 -----------------SMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFL 888
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG+ E+ + + + SS V+ +S L G++ HG V++NGFD ++ V
Sbjct: 889 HGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYV 948
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM----- 233
SL++MY + + SA+ +F +++ R++ +WN+++ + F AL L +M
Sbjct: 949 GTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGI 1008
Query: 234 SVDIV-------------------FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
D+V PN + ++ +CA L GK IH I+N
Sbjct: 1009 KPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFI 1068
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIEL 333
DVFV +AL+D Y+K +L+ AH F I NK + SWN +I+G+A +I + E+
Sbjct: 1069 EDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEM 1128
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
++G P+ TF+ +L+++ SGLI +
Sbjct: 1129 QKVGVGPDAITFT-------------------------------ALLSACKNSGLIGEGW 1157
Query: 394 AFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
+ ++ +VP + + R G +E L+ + +PD W ++ +C
Sbjct: 1158 KYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSC 1215
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 27/179 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS----------- 49
M +RN+ ++NS++S YS G EDALR+ M G +P T+ G++S
Sbjct: 972 MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKA 1031
Query: 50 --------------CDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEV 94
C SL+ ++ G ++ ++NG F D FV TAL+ +Y + L
Sbjct: 1032 FMPNSASITCLLRACASLSLLQKGKEIHCLSIRNG-FIEDVFVATALIDMYSKSSSLKNA 1090
Query: 95 VSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
VF + K+L +WN ++ F G ++ + +F E+ + V +F ++ N
Sbjct: 1091 HKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKN 1149
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 160/574 (27%), Positives = 274/574 (47%), Gaps = 43/574 (7%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL-VRSEVALTESSFV 145
+ G L + +F+ M + ++W ++++ + + + LF + V+ + +
Sbjct: 102 KQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMIS 161
Query: 146 GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR 205
+ ++ FGE +HG +K+G + V+++L++MY + I ++FK + R
Sbjct: 162 VALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKR 221
Query: 206 DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL--GKS 263
+VVSW II L + +AL + M + V + TF + + A +S+L GK+
Sbjct: 222 NVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASA--DSSLLHHGKA 279
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS 323
IH + IK + FV + L Y KC + F ++ ++VSW LI Y K
Sbjct: 280 IHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGE 339
Query: 324 PT-SIFLLIELLQLGYRPNEFTFSHVLRS----SLAFQLLQLHCLIIRMGYENYEYVLGS 378
++ + + PN++TF+ V+ + ++A Q+H ++R+G
Sbjct: 340 EEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLG---------- 389
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
V AL++ AN I +Y+++G + + R DI+S
Sbjct: 390 ----------------LVDALSV------ANSIVTLYSKSGLLKSASLVFHGITRKDIIS 427
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
W+ +IA + G KE + +MR P+ + S+LS C + L G +H +
Sbjct: 428 WSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVL 487
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
I + V + LI MY KCGS+ + KIFN M N+I+WTA+I+ +G++Q A+
Sbjct: 488 CIGI-DHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAI 546
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDL 618
F ++ +G KPD V I VLTAC H G+V G F M Y + P +HY C++DL
Sbjct: 547 NLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDL 606
Query: 619 LVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L R G L EAE +I +MP + ++W T L C+
Sbjct: 607 LCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCR 640
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 158/620 (25%), Positives = 288/620 (46%), Gaps = 50/620 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFG-GLLSCD-SLNPVE 57
M R+ +S+ ++I+ Y +AL +F M + G + QF L +C +N
Sbjct: 116 MTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGLGVNICF 175
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G L +K+GL + FV +AL+ +Y + G +++ VF+ M ++++V+W +I++
Sbjct: 176 GELLHGFSVKSGLINS-VFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLV 234
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G+ + + F E+ S+V +F + ++ L G+ IH IK GFD
Sbjct: 235 HAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSF 294
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+L MY +C ++F+ +++ DVVSW T+I + A+E + RM
Sbjct: 295 VINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSN 354
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN+ TF VI++CA L + G+ IH V++ L + V +++V Y+K L+ A
Sbjct: 355 VSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSAS 414
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
L F I+ K+I+SW+ +I Y+ F + ++ G +PNEF S VL +
Sbjct: 415 LVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMA 474
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
LL Q+H ++ +G ++ V +L++ Y+K G + +A
Sbjct: 475 LLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEA-------------------- 514
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K+ + ++ +I+SW +I A +G +E + LF+ + + + PD
Sbjct: 515 ------------SKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYV 562
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF+ +L+ACS + LG L+ IS +ID+ + G + + +
Sbjct: 563 TFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRS 622
Query: 533 M---TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL-IAVLTACRHGGL 588
M TD + W+ L+ + ++G R ++ + L P+ IA+ G
Sbjct: 623 MPCYTDD--VVWSTLLRSCRVHGDVDRG--RWTAEQLLRLDPNSAGTHIALANIYAAKGR 678
Query: 589 VREGMELFERMNRSYGVEPE 608
+E + ++ +S GV E
Sbjct: 679 WKEAAHI-RKLMKSKGVIKE 697
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 226/485 (46%), Gaps = 45/485 (9%)
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ +L NS + + + + MF + RD +SW T+I + + +AL L+ M
Sbjct: 88 HNMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNM 147
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
V + V GL +I G+ +H +K+ L VFV SAL+D Y K
Sbjct: 148 WVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGK 207
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL---QLGYRPNEFTFSHVL 349
+E F +++ +N+VSW A+I G L + ++GY + TF+ L
Sbjct: 208 IEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGY--DSHTFAIAL 265
Query: 350 RSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
++S LL +H I+ G++ +V+ +L T
Sbjct: 266 KASADSSLLHHGKAIHTQTIKQGFDESSFVINTLAT------------------------ 301
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+YN+ G+ + ++L +++ PD+VSW +I G+ + +E FK MR +
Sbjct: 302 --------MYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKS 353
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ P+ YTF +++SAC+ L G +HG + + ++ + + V N ++ +Y K G + S
Sbjct: 354 NVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALS-VANSIVTLYSKSGLLKS 412
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ +F+ +T +++I+W+ +I+ G+A+ A + M G KP+ AL +VL+ C
Sbjct: 413 ASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGS 472
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
L+ +G ++ + G++ E + ++ + + G ++EA KI M N + W
Sbjct: 473 MALLEQGKQVHAHV-LCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKI-NNIISWT 530
Query: 646 TFLEG 650
+ G
Sbjct: 531 AMING 535
>gi|414867301|tpg|DAA45858.1| TPA: hypothetical protein ZEAMMB73_727333 [Zea mays]
Length = 805
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 181/661 (27%), Positives = 325/661 (49%), Gaps = 45/661 (6%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMF--LYMINRGFEPTQFTFGGLLSCDSL-NPVEGA 59
+ ++ +NS++ R GY E+A+ ++ L + + TFG L SC L N + G
Sbjct: 106 NNDLAEWNSVMVDIFRAGYPEEAILLYRGLKLRQIDLDEKTVTFG-LKSCIELRNLLLGK 164
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ A +K GL D FVG++L+GLY + +D+ FE++ K +V++ S+++ + ++
Sbjct: 165 GMHADSVKLGL-SRDKFVGSSLVGLYSKLARMDDSQKAFEEILDKDIVSYTSMITGYSEN 223
Query: 120 --GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN--GFDYE 175
+ + ++ S + + + V ++ N + G+ +H I+ G E
Sbjct: 224 MDSTSWNAFKIVSDMSWSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSIRRDIGISDE 283
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE-LYLRMS 234
+L SLV+MY QC A + K+ + V SWN ++ L + G A+ LY+ +
Sbjct: 284 VL-ETSLVHMYMQCGACQLASAVLKN-SAQSVASWNAMLAGLVRTGQSGNAIHYLYIMLY 341
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
V P+ T+ VI++CA L NS S+HA +I+ ++ DV + +AL+ Y KC +
Sbjct: 342 EHKVVPDSVTYANVISACAELCNSGYAASVHAYIIRRSIPLDVVLATALIKVYLKCTRIT 401
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSL 353
+ F+++ K+ VS+NA+I GY +I LL E++ PN T +L +++
Sbjct: 402 ISKRLFNQLVVKDTVSYNAMIYGYLQNGMVNEAIALLKEMVTECVAPNFVTILSLL-AAI 460
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIA 412
A ++ ++ G + ++ + G S+ V AN I
Sbjct: 461 A---------------DHKDFARGRWIHGFSIRHGFCSN-------------VDIANQII 492
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY-MRAARIYPDN 471
+Y+ G+ + + E +++SW ++ C G + +ELF+ M+ PD+
Sbjct: 493 RMYSGCGKIASARIVFASFENKNLISWTTMMMGCLFCGHGGQTVELFQLLMQQHDNKPDS 552
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
++ + A S+ +L +H + + ++ DT N LI Y KCG + SV +F
Sbjct: 553 IAVMTAIQAVSEFGHLKGVKQVHCFVYRA-LLEKDTKTMNSLITAYAKCGRLDLSVSLFL 611
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ R++ +W ++ISA G++GF + LE F+ ME PD + +VL+AC H GL++E
Sbjct: 612 SLEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEEGNINPDGLTFSSVLSACSHAGLIKE 671
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G+ +F+ M Y V P+ +HY C VDL+ R GHL+E K I + + L C
Sbjct: 672 GLHIFQSMTSMYSVRPQEEHYGCFVDLMSRAGHLEEGYKFIKLSTLNDKSSVLCALLSAC 731
Query: 652 Q 652
+
Sbjct: 732 R 732
>gi|302142721|emb|CBI19924.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 160/577 (27%), Positives = 283/577 (49%), Gaps = 24/577 (4%)
Query: 85 YGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
YG+ CLD+ +FE+MP++ +WN++++ + + G E ++LF + R + E +F
Sbjct: 105 YGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITF 164
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
V+ + L +QIHGL++K GF + +++ +SLV++Y +C + A +MF ++E
Sbjct: 165 ASVLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIEN 224
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+ +SWN I+ E N +A+ ++ +M + P TF + +C+ + G I
Sbjct: 225 PNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQI 284
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
H I+ + D V S+L+D YAKC +LE A F S+KN++SW +++ GYA
Sbjct: 285 HGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQT 344
Query: 325 TSIFLLIELLQ----LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM 380
+L + + + + ++H + A + + ++R ++ ++V L+
Sbjct: 345 REARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFV----FLMRKATQDIDHVTVGLI 400
Query: 381 ------TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER- 433
S +SG F+ + + N + +Y + G T Q+
Sbjct: 401 LNVCAGLSDVESG--KQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHW 458
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
D +SWN ++ + A +G +E + +F M+ P +T +LLSAC+ + L G +
Sbjct: 459 RDRISWNALLTSHARHGLSEEAMTIFGEMQ-WETTPSKFTLGTLLSACANIFALEQGKQI 517
Query: 494 HGLIKKT--EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
HG + + EI D L+DMY KC + ++K+F E R++I W ++I N
Sbjct: 518 HGFMIRNGYEI---DVVARGALVDMYSKCRCLEYALKVFKEAPSRDLILWNSMILGCCHN 574
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G + L F ME G KPD + +L C GL G E F M+ Y + P ++H
Sbjct: 575 GRGRDVLGLFGLMEEEGVKPDHITFQGILLGCICEGLAGLGTEYFNSMSNKYCIIPRLEH 634
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPN-ALIWRTF 647
Y +++L R+G + E E I MPF P A++ R F
Sbjct: 635 YESMIELYGRHGFMDELEDFIKRMPFEPTVAMLTRVF 671
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/482 (29%), Positives = 251/482 (52%), Gaps = 11/482 (2%)
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ + N + Y +C+ + A ++F+++ RD SWN +I A A+ KAL L+ RM+
Sbjct: 95 IFLLNRAIETYGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNR 154
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
++ N+ TF V+ SCA + L K IH ++K +V +GS+LVD Y KC +
Sbjct: 155 LGIWANEITFASVLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSD 214
Query: 296 AHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F EI N N +SWN ++ Y + ++ + ++++ RP FTFS+ L + +
Sbjct: 215 ARRMFDEIENPNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSS 274
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
L Q+H + IR+GY+ E V SL+ YAK G + A + + +I
Sbjct: 275 ISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSI 334
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
++G Y +GQ E L ++ ++SWN ++A H ++E LE MR A D
Sbjct: 335 VSG-YAMSGQTREARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDID 393
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ T +L+ C+ L ++ G +HG I + + S+ FV N L+ MYGKCG++ S+ F
Sbjct: 394 HVTVGLILNVCAGLSDVESGKQVHGFIYRHGLY-SNLFVGNALLHMYGKCGNLRSTRLWF 452
Query: 531 NEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
+M+ R+ I+W AL+++ +G ++ A+ F EM++ P + L +L+AC + +
Sbjct: 453 YQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEMQW-ETTPSKFTLGTLLSACANIFAL 511
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
+G ++ M R+ G E ++ +VD+ + L+ A K+ P + ++W + +
Sbjct: 512 EQGKQIHGFMIRN-GYEIDVVARGALVDMYSKCRCLEYALKVFKEAP-SRDLILWNSMIL 569
Query: 650 GC 651
GC
Sbjct: 570 GC 571
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 160/643 (24%), Positives = 283/643 (44%), Gaps = 115/643 (17%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDS-LNPVEG 58
MP R+ S+N++I+AY++ G E AL +F M G + TF +L SC + L
Sbjct: 121 MPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLS 180
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ ++K G FC + +G++L+ +YG+ + + +F+++ + ++WN IV + +
Sbjct: 181 KQIHGLIVKYG-FCWNVILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLE 239
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ + +F +++R+ + +F + S+ L+ G QIHG+ I+ G+D + +V
Sbjct: 240 MGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVV 299
Query: 179 ANSLVNMYFQCAGIWSAEKMFK-------------------------------DVEIRDV 207
++SL++MY +C + SA ++F+ ++ R V
Sbjct: 300 SSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQTREARVLFDEMPERSV 359
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
+SWN ++ + +ALE M + T ++N CAGL + GK +H
Sbjct: 360 ISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHGF 419
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN-KNIVSWNALILGYASKSSPTS 326
+ ++ L ++FVG+AL+ Y KC NL L F ++S+ ++ +SWNAL+ +A
Sbjct: 420 IYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEE 479
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEYVLGSLMTS 382
+ +Q P++FT +L + Q Q+H +IR GYE G+L+
Sbjct: 480 AMTIFGEMQWETTPSKFTLGTLLSACANIFALEQGKQIHGFMIRNGYEIDVVARGALVDM 539
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
Y+K + AL K+ + D++ WN +
Sbjct: 540 YSKCRCLEYAL--------------------------------KVFKEAPSRDLILWNSM 567
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
I C HNG ++VL LF M + PD+ TF +L C
Sbjct: 568 ILGCCHNGRGRDVLGLFGLMEEEGVKPDHITFQGILLGC--------------------- 606
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT-----WTALISALGLNGFAQRA 557
+C G G + FN M+++ I + ++I G +GF
Sbjct: 607 ------ICE---------GLAGLGTEYFNSMSNKYCIIPRLEHYESMIELYGRHGFMDE- 650
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
LE F ++ + F+P L V AC G R G E++N
Sbjct: 651 LEDF--IKRMPFEPTVAMLTRVFNACSEHGHSRLGKWAAEQLN 691
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 179/613 (29%), Positives = 286/613 (46%), Gaps = 47/613 (7%)
Query: 55 PVEGAQLQASVLKNGLFCADAFVGTALLGLYGR--HGCLDEVVSVFEDMP--RKSLVTWN 110
P G L A LK+G + A V +L+ Y L +VF+D+P + + +WN
Sbjct: 28 PRHGEALHAWALKSGA-ASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWN 86
Query: 111 SIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK- 169
S+++ +H ++ L S V + SF + G H L K
Sbjct: 87 SLLNPLSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKI 146
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
+ V SL+NMY + + A +MF + R+ SW+T++ A + +A +L
Sbjct: 147 PSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDL 206
Query: 230 YLRMSVDIVFPNQTTFVY--VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
+ R+ ++ ++ FV V+++ + ++G+ +H ++K+ L V V ++LV Y
Sbjct: 207 F-RLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMY 265
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFS 346
AK + A F +N ++W+A+I GYA + +++ + ++ G+ P EFTF
Sbjct: 266 AKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFV 325
Query: 347 HVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
VL +S L Q H L++++G+E YV +L+ YAK G I+DA
Sbjct: 326 GVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADA---------- 375
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
+ G QL DIV W +++ NG+++E L L+ M
Sbjct: 376 --------------KEG--------FDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARM 413
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
I P T S L AC+ + L G LH I K + V + L MY KCG+
Sbjct: 414 DKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGL-GLGAPVGSALSTMYSKCGN 472
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ + +F + DR+VI W ++IS NG AL+ F EM+ G PD + I +L A
Sbjct: 473 LEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCA 532
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H GLV G E F M + YG+ P +DHY C+VD+L R G LKEA+ I ++
Sbjct: 533 CSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTC 592
Query: 643 IWRTFLEGCQRCR 655
+WR L C+ R
Sbjct: 593 LWRIVLGACRSLR 605
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 223/431 (51%), Gaps = 28/431 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLLSCDS--LNPVE 57
MP RN S++++++ Y+ E+A +F M+ E ++F +LS S L +
Sbjct: 179 MPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLM 238
Query: 58 GAQLQASVLKNGLFCADAFVG--TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G Q+ ++K+GL FV +L+ +Y + GC+ VFE ++ +TW+++++
Sbjct: 239 GEQMHGLIVKDGLL---DFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITG 295
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ ++G + + +F ++ + TE +FVGV++ S+ L G+Q HGL++K GF+ +
Sbjct: 296 YAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQ 355
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V ++LV+MY +C I A++ F + D+V W ++ ++ +AL LY RM
Sbjct: 356 IYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDK 415
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ + P+++T + +CAG+ GK +H +++K L VGSAL Y+KC NLE
Sbjct: 416 EGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLED 475
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
F I ++++++WN++I G++ L E +++ G P+ TF ++L +
Sbjct: 476 GMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCAC-- 533
Query: 355 FQLLQLHCLIIRMGYENY-----EYVLGSLMTSYA-------KSGLISDALAFVTALNIP 402
H ++ G+E + +Y L + YA ++G++ +A F+ ++ I
Sbjct: 534 -----SHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITID 588
Query: 403 RAVVPANIIAG 413
I+ G
Sbjct: 589 HGTCLWRIVLG 599
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 256/513 (49%), Gaps = 42/513 (8%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N++++ Y + + A ++F + +RD VSW TII + F A+++++ M D V
Sbjct: 45 NTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVL 104
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P Q T V+ SCA + +GK +H+ V+K L V V ++L++ YAK +L+ A +
Sbjct: 105 PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVV 164
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELL----------------QLGY----- 338
F + +N SWNA+I + + ELL Q G+
Sbjct: 165 FDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEAL 224
Query: 339 ------------RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTS 382
+P+ F+ + L + + L Q+H I+R ++ V +L++
Sbjct: 225 QFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISM 284
Query: 383 YAKSGLISDALAFVTALNIPR-AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
YAKSG + A + I V+ + Y + G ++ + L+ PD+V+W
Sbjct: 285 YAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTA 344
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG-LIKKT 500
+I NG + +E+FK M + P+++T ++LSA S + +L G +H I+
Sbjct: 345 MIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSG 404
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISALGLNGFAQRALE 559
E +S V N L MY K GSI + K+FN + +R+ ++WT++I AL +G + A+E
Sbjct: 405 EALSPS--VGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIE 462
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
F +M LG KPD + + VL+AC HGGLV +G F+ M + ++P + HY C+VDL
Sbjct: 463 LFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLF 522
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G L+EA K + MP P+ + W + L C+
Sbjct: 523 GRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCK 555
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 142/638 (22%), Positives = 262/638 (41%), Gaps = 125/638 (19%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G L A L N + F +L Y + G L++ VF+ +P + V+W +I+ +
Sbjct: 24 GFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYN 83
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G ED + +F ++V+ +V T+ + V+ + G+++H V+K G +
Sbjct: 84 QMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVP 143
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIR-------------------------------D 206
VANSL+NMY + + A+ +F +++R D
Sbjct: 144 VANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERD 203
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVF-PNQTTFVYVINSCAGLQNSILGKSIH 265
+VSWN++I + +AL+ + + D P++ + +++CA L+ GK IH
Sbjct: 204 IVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIH 263
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLE------------------------------- 294
+++ + VG+AL+ YAK +E
Sbjct: 264 GYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGD 323
Query: 295 --GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
A F+ + + ++V+W A+I+GY + +I + ++ G RPN FT + +L +
Sbjct: 324 ITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSA 383
Query: 352 SLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
S + L Q+H IR G V +L T YAK+G I+ A L R V
Sbjct: 384 SSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVS 443
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNG------DYKEVL- 456
+ + G E ++L Q+ +PD +++ V++AC H G Y +++
Sbjct: 444 WTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMK 503
Query: 457 --------------------------ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
E +K++ + PD + SLLS+C N+ L
Sbjct: 504 NVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLA 563
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV-----ITWTALI 545
+ E +S + + L ++Y CG + KI M R V ++W +
Sbjct: 564 KVAAERLLLIEPNNSGAY--SALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQ 621
Query: 546 SALGLNGFAQ----------RALEK-FREMEFLGFKPD 572
+ + G + ++K ++E++ +GF PD
Sbjct: 622 NKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPD 659
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 135/563 (23%), Positives = 242/563 (42%), Gaps = 106/563 (18%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P R+ VS+ +II Y++ G EDA+++F+ M+ PTQFT +L SC + G
Sbjct: 67 IPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIG 126
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCL--------------------------- 91
++ + V+K GL A V +LL +Y + G L
Sbjct: 127 KKVHSFVVKLGLH-ACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMN 185
Query: 92 ----DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR-SEVALTESSFVG 146
D ++ FE + + +V+WNS+++ +HGF + + F +++ + + S
Sbjct: 186 CGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLAS 245
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG--------------- 191
+ +N + L FG+QIHG +++ FD V N+L++MY + G
Sbjct: 246 ALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISD 305
Query: 192 ------------------IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
I A ++F ++ DVV+W +I ++ A+E++ M
Sbjct: 306 LDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTM 365
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ PN T ++++ + + + GK IHA I++ VG+AL YAK ++
Sbjct: 366 VSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSI 425
Query: 294 EGAHLCFSEI-SNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
GA F+ + N++ VSW ++I+ A +I L ++L LG +P+ T+ VL +
Sbjct: 426 NGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSA 485
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
H ++ G ++ LM + K I L+ +
Sbjct: 486 C-------THGGLVEQGRSYFD-----LMKNVHK---IDPTLSHYACM------------ 518
Query: 412 AGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEV-LELFKYMRAARIYP 469
++ R G E K + + PD+++W ++++C YK V L R I P
Sbjct: 519 VDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKV---YKNVDLAKVAAERLLLIEP 575
Query: 470 DNYTFVSLL----SACSKLCNLA 488
+N S L S+C K + A
Sbjct: 576 NNSGAYSALANVYSSCGKWDDAA 598
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 186/452 (41%), Gaps = 75/452 (16%)
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS---- 323
++K L V++ + L++ YAK AH F+E+ K SWN ++ GYA +
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 324 ----------------------------PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
+I + +++++ P +FT ++VL S A
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
++H ++++G V SL+ YAK+G + A + + R N +
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKL-RNTSSWNAM 179
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF-KYMRAARIYPD 470
++ G+ + + L DIVSWN +IA C +G E L+ F ++ + PD
Sbjct: 180 ISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPD 239
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC---------- 520
++ S LSAC+ L L+ G +HG I +T +S V N LI MY K
Sbjct: 240 RFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGA-VGNALISMYAKSGGVEIARRII 298
Query: 521 -----------------------GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
G I + +IFN + D +V+ WTA+I NG A
Sbjct: 299 EQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDA 358
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS-YGVEPEMDHYHCVV 616
+E F+ M G +P+ L A+L+A + G ++ RS + P + + +
Sbjct: 359 IEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVG--NALT 416
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ + G + A K+ + + + W + +
Sbjct: 417 TMYAKAGSINGARKVFNLLRQNRDTVSWTSMI 448
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 172/581 (29%), Positives = 275/581 (47%), Gaps = 40/581 (6%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
+G ALL ++ R G L + VF M +++L +WN +V + K G ++ + L+ ++
Sbjct: 143 LGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVG 202
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
V +F V+ +L G +IH VI+ GF+ ++ V N+L+ MY +C + +A
Sbjct: 203 VKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTAR 262
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
+F + RD +SWN +I E+ + L L+ M V P+ T VI +C L
Sbjct: 263 LVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLG 322
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ LG+ IH V++ D + ++L+ Y+ +E A FS +++VSW A+I
Sbjct: 323 DDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMIS 382
Query: 317 GYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYEN 371
GY + P ++++ G P+E T + VL + + LH + + G +
Sbjct: 383 GYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVS 442
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
Y V SL+ YAK I AL I++ T + N
Sbjct: 443 YSIVANSLIDMYAKCKCIDKALE-------------------IFHSTLEKN--------- 474
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
IVSW +I N E L F+ M R+ P++ T V +LSAC+++ L G
Sbjct: 475 ----IVSWTSIILGLRINNRCFEALFFFREM-IRRLKPNSVTLVCVLSACARIGALTCGK 529
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H +T + S D F+ N ++DMY +CG + + K F + D V +W L++
Sbjct: 530 EIHAHALRTGV-SFDGFMPNAILDMYVRCGRMEYAWKQFFSV-DHEVTSWNILLTGYAER 587
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G A E F+ M P+ V I++L AC G+V EG+E F M Y + P + H
Sbjct: 588 GKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKH 647
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y CVVDLL R G L+EA + I MP P+ +W L C+
Sbjct: 648 YACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCR 688
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 151/496 (30%), Positives = 257/496 (51%), Gaps = 32/496 (6%)
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
+ + + ++V +I ++ + G +++ V + L + N+L++M+ + + A
Sbjct: 101 RIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDA 160
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
+F +E R++ SWN ++G A++ F +AL+LY RM V P+ TF V+ +C G+
Sbjct: 161 WYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGM 220
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
N + G+ IH VI+ E DV V +AL+ Y KC ++ A L F ++ N++ +SWNA+I
Sbjct: 221 PNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMI 280
Query: 316 LGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEY 374
GY + L +++ P+ T + V+ A +LL R+G + + Y
Sbjct: 281 SGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVI---TACELLGDD----RLGRQIHGY 333
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
V L T + + I ++L IP +Y+ G E + S+ E
Sbjct: 334 V---LRTEFGRDPSIHNSL-------IP-----------MYSSVGLIEEAETVFSRTECR 372
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
D+VSW +I+ + ++ LE +K M A I PD T +LSACS LCNL +G +LH
Sbjct: 373 DLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLH 432
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
+ K+ ++S + V N LIDMY KC I +++IF+ ++N+++WT++I L +N
Sbjct: 433 EVAKQKGLVSY-SIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRC 491
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHC 614
AL FREM KP+ V L+ VL+AC G + G E+ R+ GV + +
Sbjct: 492 FEALFFFREM-IRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRT-GVSFDGFMPNA 549
Query: 615 VVDLLVRYGHLKEAEK 630
++D+ VR G ++ A K
Sbjct: 550 ILDMYVRCGRMEYAWK 565
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 148/551 (26%), Positives = 262/551 (47%), Gaps = 35/551 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSL-NPVEG 58
M RN+ S+N ++ Y++ G ++AL ++ M+ G +P +TF +L +C + N V G
Sbjct: 167 MEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRG 226
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ V++ G F +D V AL+ +Y + G ++ VF+ MP + ++WN+++S + +
Sbjct: 227 REIHVHVIRYG-FESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFE 285
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + LF +++ V + VI D G QIHG V++ F + +
Sbjct: 286 NGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSI 345
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL+ MY I AE +F E RD+VSW +I KALE Y M + +
Sbjct: 346 HNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGI 405
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ T V+++C+ L N +G ++H + L V ++L+D YAKC ++ A
Sbjct: 406 MPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALE 465
Query: 299 CFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F KNIVSW ++ILG + ++F E+++ +PN T VL S ++
Sbjct: 466 IFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIR-RLKPNSVTLVCVL--SACARI 522
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
L C G E + + L ++G+ D N I +Y R
Sbjct: 523 GALTC-----GKEIHAHAL--------RTGVSFDGFM-------------PNAILDMYVR 556
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G+ K ++ ++ SWNI++ A G ELF+ M + + P+ TF+S+
Sbjct: 557 CGRMEYAWKQFFSVDH-EVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISI 615
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR- 536
L ACS+ +A G +K I + ++D+ G+ G + + + +M +
Sbjct: 616 LCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKP 675
Query: 537 NVITWTALISA 547
+ W AL+++
Sbjct: 676 DPAVWGALLNS 686
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 184/680 (27%), Positives = 330/680 (48%), Gaps = 64/680 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPT--QFTFGGLL-SCDSLNPVE 57
+P V +N+II + DAL +F + P +TF L +C ++
Sbjct: 63 IPRPTTVLWNTIIIGFICNNMPIDAL-LFYARMRASPSPKFDSYTFSSTLKACAQARSLK 121
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVV---------------SVFEDM 101
G L VL++ F + V +LL +Y CL EV VF+ M
Sbjct: 122 LGKALHCHVLRSH-FGSSRIVYNSLLNMYST--CLTEVPYLGTAYDFNNCDLVRRVFDTM 178
Query: 102 PRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGE 161
++++V WN+++S + K + + +F ++R + T SFV V + D +
Sbjct: 179 RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNAN 238
Query: 162 QIHGLVIKNGFDY--ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
++GLV+K G DY + V +S + MY + + A ++F R+ WNT+IG +
Sbjct: 239 VLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQ 298
Query: 220 SENFGKALELYLR-MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ +A++L+++ M + + TF+ + + + LQ LG+ +HA ++K++ V
Sbjct: 299 NNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVV 358
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLG 337
+ +A++ Y++C ++ + FS + +++V+WN ++ + + L+ E+ + G
Sbjct: 359 ILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQG 418
Query: 338 YRPNEFTFSHVLR--SSLAFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
+ + T + +L S+L Q + Q H +IR G + +E + G L+ YAKSGLI+ A
Sbjct: 419 FMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQ-FEGMDGYLIDMYAKSGLITTA- 476
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
++ + Y+ D +WN +IA NG +
Sbjct: 477 ------------------QQLFEKNSXYDR-----------DEATWNAMIAGYTQNGLSE 507
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
E +F+ M + P+ T S+L AC+ + + LG +HG + ++ + FV L
Sbjct: 508 EGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRC-FLNQNVFVGTAL 566
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+DMY K G+I + +F E ++N +T+T +I + G +G +RAL F M G KPD
Sbjct: 567 LDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDS 626
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
V +A+L+AC + GLV EG+ +F+ M R Y ++P +HY CV D+L R G + EA + +
Sbjct: 627 VTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVK 686
Query: 634 TMPFPPNAL-IWRTFLEGCQ 652
+ N IW + L C+
Sbjct: 687 GLGEEGNTFRIWGSLLGACR 706
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 237/529 (44%), Gaps = 50/529 (9%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES-SFV 145
R G + + +F+ +PR + V WN+I+ F + D + + + S +S +F
Sbjct: 49 RQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFS 108
Query: 146 GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG----IWSA------ 195
+ + + L+ G+ +H V+++ F +V NSL+NMY C + +A
Sbjct: 109 STLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNC 168
Query: 196 ---EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
++F + R+VV+WNT+I ++E +A +++ M + P +FV V +
Sbjct: 169 DLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAV 228
Query: 253 AGLQNSILGKSIHAKVIKNALEC--DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+ + ++ V+K + D FV S+ + YA+ ++ A F +N
Sbjct: 229 WRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEV 288
Query: 311 WNALILGYASKSSP-TSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMG 368
WN +I GY + P +I L +++++ + ++ TF L + Q L L G
Sbjct: 289 WNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDL-------G 341
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
+ + Y+L KS I VV N I +Y+R G + K+
Sbjct: 342 RQLHAYIL--------KSSTILQ-------------VVILNAIIVMYSRCGSIGTSFKVF 380
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
S + D+V+WN +++A NG E L L M+ D+ T +LLS S L +
Sbjct: 381 SNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQE 440
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF--NEMTDRNVITWTALIS 546
+G H + + I + LIDMY K G I ++ ++F N DR+ TW A+I+
Sbjct: 441 IGKQAHAYLIRHGIQFEG--MDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIA 498
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
NG ++ FR+M +P+ V L ++L AC G + G ++
Sbjct: 499 GYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQI 547
>gi|356506341|ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Glycine max]
Length = 895
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 175/606 (28%), Positives = 297/606 (49%), Gaps = 56/606 (9%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ + +G F + V +L+ +Y + G + + VFE++ +V+WN+++S
Sbjct: 96 GCQIHGFAVCSG-FVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLS--- 151
Query: 118 KHGFVE--DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
GF E D + + +A ++ + + FG Q+H LV+K G E
Sbjct: 152 --GFEESVDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCE 209
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA-ESENFG-KALELYLRM 233
+ + N+LV MY + + A ++F ++ RD+VSWN +I A E + +G +A+ L++ M
Sbjct: 210 VFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNM 269
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ + + +++C ++N LG+ IH K V V + L+ Y+KC+
Sbjct: 270 VRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVP 329
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-- 351
+ A F ISN+N+VSW +I S ++ L + G PN+ TF ++ +
Sbjct: 330 KDAKAVFESISNRNVVSWTTMI----SIDEEDAVSLFNAMRVNGVYPNDVTFIGLIHAVT 385
Query: 352 --SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+L + L +H L I+ + + + V S +T YAK I
Sbjct: 386 IRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECI-------------------- 425
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR-IY 468
E+ K+ +L + VSWN +I+ A NG YKE L Y+ A + I
Sbjct: 426 ------------QESTKIFEELNCRETVSWNALISGYAQNGSYKEAL--LTYLSAVKEIK 471
Query: 469 PDNYTFVSLLSACSKLCNLAL--GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
P+ YTF S+L+A + +++L G S H + K + +D V L+DMYGK G I S
Sbjct: 472 PNQYTFGSVLNAIAAAEDISLNHGKSCHSHLLKLGL-GTDPIVSGALLDMYGKRGDIIES 530
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
++FNE +R WTA+ISA +G + + + EME G PD + ++VL AC
Sbjct: 531 QRVFNETLERTQFAWTAIISAYARHGDFESVMSLYTEMEREGINPDSITFLSVLAACCRK 590
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
G+V G +F+ M + + +EP +HY +VD+L R G L EAE+++ +P P + ++
Sbjct: 591 GMVDAGHRVFDSMVKKHSIEPTSEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQS 650
Query: 647 FLEGCQ 652
L C+
Sbjct: 651 LLGSCR 656
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 211/439 (48%), Gaps = 55/439 (12%)
Query: 154 EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTI 213
+ + + G QIHG + +GF + V+NSL+ MY + A +F+++ D+VSWNT+
Sbjct: 90 QGESKLGCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTV 149
Query: 214 IGALAESE---NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
+ ES NF +++ Y ++ D V T+ + C G + G +H+ V+K
Sbjct: 150 LSGFEESVDALNFARSMH-YCGIAFDPV-----TYTSALAFCWGDHGFLFGWQLHSLVVK 203
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS---PTSI 327
L C+VF+G+ALV Y++ L+ A F E+ +++VSWNA+I GYA + ++
Sbjct: 204 CGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAV 263
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSY 383
L + +++ G + + + + + + L Q+H L ++GY + V LM++Y
Sbjct: 264 LLFVNMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTY 323
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
+K + DA A + I NR ++VSW +I
Sbjct: 324 SKCEVPKDAKA---------------VFESISNR-----------------NVVSWTTMI 351
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
+ D ++ + LF MR +YP++ TF+ L+ A + + G ++HGL K+ +
Sbjct: 352 SI-----DEEDAVSLFNAMRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFL 406
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFRE 563
S T V N I MY K I S KIF E+ R ++W ALIS NG + AL +
Sbjct: 407 SEQT-VSNSFITMYAKFECIQESTKIFEELNCRETVSWNALISGYAQNGSYKEALLTYLS 465
Query: 564 MEFLGFKPDRVALIAVLTA 582
KP++ +VL A
Sbjct: 466 A-VKEIKPNQYTFGSVLNA 483
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 187/356 (52%), Gaps = 14/356 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCG--YVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE 57
MP+R++VS+N++IS Y++ G Y +A+ +F+ M+ G + G +S C + +E
Sbjct: 236 MPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLE 295
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G Q+ K G + V L+ Y + + +VFE + +++V+W +++SI
Sbjct: 296 LGRQIHGLTQKVG-YGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMISI- 353
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
ED + LF + + V + +F+G+IH ++ + G IHGL IK+ F E
Sbjct: 354 ----DEEDAVSLFNAMRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQ 409
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V+NS + MY + I + K+F+++ R+ VSWN +I A++ ++ +AL YL +V
Sbjct: 410 TVSNSFITMYAKFECIQESTKIFEELNCRETVSWNALISGYAQNGSYKEALLTYLS-AVK 468
Query: 237 IVFPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ PNQ TF V+N+ A ++ L GKS H+ ++K L D V AL+D Y K ++
Sbjct: 469 EIKPNQYTFGSVLNAIAAAEDISLNHGKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDII 528
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVL 349
+ F+E + +W A+I YA S+ L E+ + G P+ TF VL
Sbjct: 529 ESQRVFNETLERTQFAWTAIISAYARHGDFESVMSLYTEMEREGINPDSITFLSVL 584
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 156/365 (42%), Gaps = 56/365 (15%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
++ T + +C G S LG IH + + V V ++L+ Y K N A + F
Sbjct: 78 DEVTVALSLKACQG--ESKLGCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVF 135
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL--- 357
+S+ +IVSWN ++ G+ + + + + P +T S+LAF
Sbjct: 136 ENLSHPDIVSWNTVLSGFEESVDALNFARSMHYCGIAFDPVTYT------SALAFCWGDH 189
Query: 358 -----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
QLH L+++ G ++ +L+T
Sbjct: 190 GFLFGWQLHSLVVKCGLGCEVFIGNALVT------------------------------- 218
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK--EVLELFKYMRAARIYPD 470
+Y+R G +E ++ ++ D+VSWN +I+ A G E + LF M + D
Sbjct: 219 -MYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVRHGMLID 277
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ + +SAC + NL LG +HGL +K + VCN+L+ Y KC + +F
Sbjct: 278 HVSLTGAVSACGHMKNLELGRQIHGLTQKVG-YGTHVSVCNVLMSTYSKCEVPKDAKAVF 336
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+++RNV++WT +IS + A+ F M G P+ V I ++ A LV
Sbjct: 337 ESISNRNVVSWTTMISI-----DEEDAVSLFNAMRVNGVYPNDVTFIGLIHAVTIRNLVT 391
Query: 591 EGMEL 595
EG+ +
Sbjct: 392 EGLTI 396
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 114/262 (43%), Gaps = 25/262 (9%)
Query: 339 RPNEFTFSH----VLRSSLAFQLL-------QLHCLIIRMGYENYEYVLG--SLMTSYAK 385
PN + +H L S L FQ L QLH L EN + V SL +
Sbjct: 39 HPNAASVNHSMLNCLHSRLPFQALTAFKNHFQLHSL------ENVDEVTVALSLKACQGE 92
Query: 386 SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA 445
S L F V +N + +Y ++G + + + + L PDIVSWN V++
Sbjct: 93 SKLGCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSG 152
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
+ D L + M I D T+ S L+ C G LH L+ K +
Sbjct: 153 FEESVD---ALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCG-LGC 208
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG--FAQRALEKFRE 563
+ F+ N L+ MY + G + + ++F+EM +R++++W A+IS G + A+ F
Sbjct: 209 EVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVN 268
Query: 564 MEFLGFKPDRVALIAVLTACRH 585
M G D V+L ++AC H
Sbjct: 269 MVRHGMLIDHVSLTGAVSACGH 290
>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Glycine max]
Length = 563
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/500 (29%), Positives = 249/500 (49%), Gaps = 34/500 (6%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYF--QCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+++HGL++ ++ + L++ + I A+ + + + V WN++I
Sbjct: 21 KKLHGLIVTTPTIKSIIPLSKLIDFCVDSEFGDINYADLVLRQIHNPSVYIWNSMIRGFV 80
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
S N ++ LY +M + P+ TF +V+ +C + + GK IH+ ++K+ E D +
Sbjct: 81 NSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQDCGKCIHSCIVKSGFEADAY 140
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLG 337
+ L+ Y C +++ F I N+V+W LI GY + P + E +
Sbjct: 141 TATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVKNNQPYEALKVFEDMSHWN 200
Query: 338 YRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
PNE T + L + + + +H I + GY+
Sbjct: 201 VEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYD----------------------- 237
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
F++ N ++ A I +Y + G+ L +++ + +IVSWN +I A ++
Sbjct: 238 PFMSTSN--SNIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQ 295
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
E L+LF M + +YPD TF+S+LS C+ C LALG ++H + KT I ++D + L
Sbjct: 296 EALDLFFDMWTSGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGI-ATDISLATAL 354
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM-EFLGFKPD 572
+DMY K G +G++ KIF+ + ++V+ WT++I+ L ++G AL F+ M E PD
Sbjct: 355 LDMYAKTGELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPD 414
Query: 573 RVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII 632
+ I VL AC H GLV E + F M YG+ P +HY C+VDLL R GH +EAE+++
Sbjct: 415 HITYIGVLFACSHVGLVEEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAERLM 474
Query: 633 TTMPFPPNALIWRTFLEGCQ 652
TM PN IW L GCQ
Sbjct: 475 ETMTVQPNIAIWGALLNGCQ 494
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 213/454 (46%), Gaps = 40/454 (8%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQ 62
+V +NS+I + ++ ++ MI G+ P FTF +L C + G +
Sbjct: 68 SVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQDCGKCIH 127
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+ ++K+G F ADA+ T LL +Y + + VF+++P+ ++V W +++ + K+
Sbjct: 128 SCIVKSG-FEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVKNNQP 186
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD-------YE 175
+ + +F ++ V E + V + ++ +D++ G +H + K G+D
Sbjct: 187 YEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDPFMSTSNSN 246
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+++A +++ MY +C + A +F + R++VSWN++I A + E +AL+L+ M
Sbjct: 247 IILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFFDMWT 306
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V+P++ TF+ V++ CA LG+++HA ++K + D+ + +AL+D YAK L
Sbjct: 307 SGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLATALLDMYAKTGELGN 366
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR--PNEFTFSHVLRSSL 353
A FS + K++V W ++I G A + + +Q P+ T+ VL +
Sbjct: 367 AQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITYIGVLFACS 426
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L++ R+ E Y V G G + D L+
Sbjct: 427 HVGLVEEAKKHFRLMTEMYGMVPGR-----EHYGCMVDLLS------------------- 462
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
R G + E +L+ + +P+I W ++ C
Sbjct: 463 ---RAGHFREAERLMETMTVQPNIAIWGALLNGC 493
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 143/262 (54%), Gaps = 9/262 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
+P NVV++ +I+ Y + +AL++F M + EP + T L++C ++ G
Sbjct: 165 IPKWNVVAWTCLIAGYVKNNQPYEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTG 224
Query: 59 AQLQASVLKNG------LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
+ + K G ++ + TA+L +Y + G L +F MP++++V+WNS+
Sbjct: 225 RWVHQRIRKAGYDPFMSTSNSNIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSM 284
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
++ + ++ ++ + LF ++ S V +++F+ V+ +++ L G+ +H ++K G
Sbjct: 285 INAYNQYERHQEALDLFFDMWTSGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGI 344
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
++ +A +L++MY + + +A+K+F ++ +DVV W ++I LA + +AL ++
Sbjct: 345 ATDISLATALLDMYAKTGELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQT 404
Query: 233 MSVD-IVFPNQTTFVYVINSCA 253
M D + P+ T++ V+ +C+
Sbjct: 405 MQEDSSLVPDHITYIGVLFACS 426
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 137/312 (43%), Gaps = 38/312 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP RN+VS+NS+I+AY++ ++AL +F M G P + TF +LS C + G
Sbjct: 273 MPQRNIVSWNSMINAYNQYERHQEALDLFFDMWTSGVYPDKATFLSVLSVCAHQCALALG 332
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A +LK G+ D + TALL +Y + G L +F + +K +V W S+++
Sbjct: 333 QTVHAYLLKTGI-ATDISLATALLDMYAKTGELGNAQKIFSSLQKKDVVMWTSMINGLAM 391
Query: 119 HGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
HG + + +F + S + +++GV+ S+ GLV + + L+
Sbjct: 392 HGHGNEALSMFQTMQEDSSLVPDHITYIGVLFACSHV----------GLVEEAKKHFRLM 441
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+M+ V R+ + ++ L+ + +F +A L M+V
Sbjct: 442 T------------------EMYGMVPGRE--HYGCMVDLLSRAGHFREAERLMETMTVQ- 480
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN + ++N C +N + + + +K C V L + YAK E +
Sbjct: 481 --PNIAIWGALLNGCQIHENVCVANQVKVR-LKELEPCQSGVHILLSNIYAKAGRWEEVN 537
Query: 298 LCFSEISNKNIV 309
+ + +K I
Sbjct: 538 VTRKVMKHKRIT 549
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/527 (29%), Positives = 262/527 (49%), Gaps = 42/527 (7%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
NSL+++Y + + A +F ++ RD VSW ++ L FG+A++++L M D +
Sbjct: 100 NSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLS 159
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE----- 294
P Q T V++SCA + +G+ +H+ V+K L V V +++++ Y KC + E
Sbjct: 160 PTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAV 219
Query: 295 ------------------GAHL--------CFSEISNKNIVSWNALILGYASKS-SPTSI 327
AHL F + ++ IVSWNA+I GY + ++
Sbjct: 220 FERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKAL 279
Query: 328 FLLIELLQLG-YRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTS 382
+ +L P+EFT + VL + ++ Q+H I+R V +L++
Sbjct: 280 WFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISM 339
Query: 383 YAKSGLISDALAFVT-ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
YAKSG + +A + A+ V+ + Y + G ++ + D+V+W
Sbjct: 340 YAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTA 399
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH-GLIKKT 500
+I NG E +ELF+ M + P++YT ++LS C+ L L G +H I+
Sbjct: 400 MIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSL 459
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN-VITWTALISALGLNGFAQRALE 559
+ SS V N ++ MY + GS+ + ++F+ + R +TWT++I AL +G + A+
Sbjct: 460 QEQSSS--VSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVG 517
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
F EM +G KPDR+ + VL+AC H G V EG F+++ +G+ PEM HY C+VDLL
Sbjct: 518 LFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLL 577
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYDTLNSTK 666
R G EA++ I MP P+A+ W + L C+ + A L + K
Sbjct: 578 ARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEK 624
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 143/599 (23%), Positives = 259/599 (43%), Gaps = 109/599 (18%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
+ F +LL LY + G L + +VF +MP + V+W +V + G + + +F ++V
Sbjct: 95 NVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMV 154
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
++ T+ + V+ + + G ++H V+K G + VANS++NMY +C
Sbjct: 155 TDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAE 214
Query: 194 SA----EKM---------------------------FKDVEIRDVVSWNTIIGALAESEN 222
+A E+M F+++ R +VSWN +I ++
Sbjct: 215 TARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGL 274
Query: 223 FGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK----------N 271
KAL + RM S + P++ T V+++CA L +GK +HA +++ N
Sbjct: 275 NAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTN 334
Query: 272 AL-----------------------ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
AL + +V +AL++ Y K +++ A F +SN+++
Sbjct: 335 ALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDV 394
Query: 309 VSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLL----QLHCL 363
V+W A+I+GY L L+ + G PN +T + VL + L Q+HC
Sbjct: 395 VAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCK 454
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
IR E V S++T YA+SG ++P A +++R E
Sbjct: 455 AIRSLQEQSSSVSNSIVTMYARSG------------SLPWA-------RRVFDRVHWRKE 495
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
T V+W +I A A +G ++ + LF+ M + PD TFV +LSAC+
Sbjct: 496 T------------VTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTH 543
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWT 542
+ + G ++ I + ++D+ + G + + +M + + I W
Sbjct: 544 VGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWG 603
Query: 543 ALISALGLN---GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
+L+SA ++ A+ A EK ++ G AL V +AC G + ++++R
Sbjct: 604 SLLSACRVHKNADLAELAAEKLLSID-PGNSGAYSALSNVYSAC---GRWNDAAKIWKR 658
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 144/663 (21%), Positives = 268/663 (40%), Gaps = 161/663 (24%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGA- 59
MP+R+ VS+ ++ +R G +A++MFL M+ G PTQFT +LS + G
Sbjct: 122 MPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVG 181
Query: 60 -QLQASVLKNGLF---------------CADAFVG---------------TALLGLYGRH 88
++ + V+K GL C DA A++ L
Sbjct: 182 RKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHL 241
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR-SEVALTESSFVGV 147
G +D +S+FE+MP +++V+WN++++ + ++G ++ F ++ S +A E + V
Sbjct: 242 GRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSV 301
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS------------- 194
+ +N + G+Q+H ++++ Y V N+L++MY + + +
Sbjct: 302 LSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADL 361
Query: 195 --------------------AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
A +MF + RDVV+W +I ++ + +A+EL+ M
Sbjct: 362 NVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMI 421
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
PN T V++ CA L GK IH K I++ E V +++V YA+ +L
Sbjct: 422 RSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLP 481
Query: 295 GAHLCFSEIS-NKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A F + K V+W ++I+ A ++ L E+L++G +P+ TF VL +
Sbjct: 482 WARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSA- 540
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA---- 408
C + G + + + L +VP
Sbjct: 541 ---------CTHV---------------------GFVDEGKRYFQQLQDKHGIVPEMSHY 570
Query: 409 NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACA--HNGDYKEVLELFKYMRAA 465
+ + R G ++E + + Q+ PD ++W +++AC N D E+
Sbjct: 571 ACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAEL---------- 620
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
A KL ++ G+S + L ++Y CG
Sbjct: 621 --------------AAEKLLSIDPGNS---------------GAYSALSNVYSACGRWND 651
Query: 526 SVKIFNEMTDRNV-----ITWTALISALGLNG-----FAQR------ALEKFREMEFLGF 569
+ KI+ D++V +WT + + + + G QR A + + +++ GF
Sbjct: 652 AAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGF 711
Query: 570 KPD 572
PD
Sbjct: 712 VPD 714
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 186/416 (44%), Gaps = 42/416 (10%)
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLL 330
A + +VF ++L+ YAK L A F+E+ ++ VSW +++G +I +
Sbjct: 91 AAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMF 150
Query: 331 IELLQLGYRPNEFTFSHVLRSSLAFQL----LQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
++++ G P +FT ++VL S A + ++H ++++G + V S++ Y K
Sbjct: 151 LDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKC 210
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
G A A + R+V N + + G+ + + L + IVSWN VIA
Sbjct: 211 GDAETARAVFERMP-ERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGY 269
Query: 447 AHNGDYKEVLELFKYMRA-ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
NG + L F M + + + PD +T S+LSAC+ L +++G +H I ++ +
Sbjct: 270 NQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYI 329
Query: 506 DTFVCNMLIDMYGKCGSIGS---------------------------------SVKIFNE 532
V N LI MY K GS+ + + ++F+
Sbjct: 330 GQ-VTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDV 388
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
M++R+V+ WTA+I NG A+E FR M G +P+ + AVL+ C + G
Sbjct: 389 MSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYG 448
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
++ + RS E + +V + R G L A ++ + + + W + +
Sbjct: 449 KQIHCKAIRSLQ-EQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMI 503
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 172/600 (28%), Positives = 300/600 (50%), Gaps = 44/600 (7%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
QL A ++ +GL D + + L+ Y G + +F+++ ++ + +N ++ ++
Sbjct: 42 QLHAHLITSGLLSID--IRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAK 99
Query: 120 GFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + M +F E++ S+ ++ ++ VI S +E+G +HGL + + F L V
Sbjct: 100 GDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFV 159
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL+ MY C + A K+F ++ + VVSWNT+I ++ AL ++ +M V
Sbjct: 160 LNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGV 219
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ + V V+ +C L+ +G+ +H V + L + V +ALVD YAKC +++ A L
Sbjct: 220 EIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKI-VSNALVDMYAKCGSMDEARL 278
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F + +++VSW ++I GY S L +++Q+ G RPN T + +L + +
Sbjct: 279 VFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNN 338
Query: 358 LQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L+ LH +++ + V SL+ YAK + L+F
Sbjct: 339 LKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCL--GLSF-----------------S 379
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++ RT R V WN +++ C HN E + LFK M + + T
Sbjct: 380 VFTRT-------------SRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAAT 426
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
SLL A L +L ++++ + ++ +S + V LID+Y KCGS+ S+ KIFN +
Sbjct: 427 CNSLLPAYGILADLQPVNNINSYLMRSGFVS-NIQVATSLIDIYSKCGSLESAHKIFNTI 485
Query: 534 TD--RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+++ W+ +I+ G++G + A+ F++M G KP+ V +VL +C H G+V +
Sbjct: 486 PVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDD 545
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G+ LF+ M + + P DHY C+VDLL R G + EA +I TMPF P +W L C
Sbjct: 546 GLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGAC 605
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 150/557 (26%), Positives = 270/557 (48%), Gaps = 43/557 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI-NRGFEPTQFTFGGLL-SCDSLNPVEG 58
+ R + +N +I Y G +A+++FL M+ ++ P +T+ ++ +C L VE
Sbjct: 81 LRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEY 140
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ + F + FV +LL +Y G ++E VF+ M KS+V+WN++++ + K
Sbjct: 141 GRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFK 200
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF + +F ++V S V + +S V V+ ++LE G ++HGLV + + +V
Sbjct: 201 NGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKK-IV 259
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N+LV+MY +C + A +F ++ RDVVSW ++I + + AL L+ M ++ +
Sbjct: 260 SNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGL 319
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T ++ +CA L N G+ +H V+K L +V V ++L+D YAKC+ L +
Sbjct: 320 RPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFS 379
Query: 299 CFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F+ S K V WNAL+ G +K + +I L ++L G N T + +L +
Sbjct: 380 VFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILAD 439
Query: 358 LQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
LQ ++ ++R G+ + V SL+ Y+K G + A +P ++
Sbjct: 440 LQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFN-------TIPVDV--- 489
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
DI W+I+IA +G + + LFK M + + P++ T
Sbjct: 490 --------------------QDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVT 529
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTE--IISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
F S+L +CS + G L + K I + D + C ++D+ G+ G + + +
Sbjct: 530 FTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTC--MVDLLGRAGRMDEAYDLIK 587
Query: 532 EMT-DRNVITWTALISA 547
M W AL+ A
Sbjct: 588 TMPFMPGHAVWGALLGA 604
>gi|357165628|ref|XP_003580444.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Brachypodium distachyon]
Length = 779
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 169/609 (27%), Positives = 306/609 (50%), Gaps = 52/609 (8%)
Query: 61 LQASVLKNGLFCAD-AFVGTALLGLYG-----RHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+ A +L+ D A + +LL LY RHG +D V +F+ P++++V+WN++V
Sbjct: 122 VHAHLLRRARSLPDTAVLRNSLLNLYASCARYRHGGVDVVRRLFDATPKRNVVSWNTLVG 181
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ K G + + +F ++ + T SFV V +++ D + ++G++IK+G +Y
Sbjct: 182 WYVKTGRPYEALEMFMRMLEDGIRPTPVSFVNVFPAAASD-DPSWPFFLYGMLIKHGVEY 240
Query: 175 --ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+L V +S + M+ + + SA +F +++ WNT+I ++ F +A++L+++
Sbjct: 241 VSDLFVVSSAIAMFSEIGDVQSARMVFDHAAKKNIEVWNTMITGYVQNGQFSEAMDLFIQ 300
Query: 233 MSVDIVFP-NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC-DVFVGSALVDFYAKC 290
+ P + TF+ I + + Q+ LG+ +H ++K V +G+ALV Y++C
Sbjct: 301 IMGSKGVPLDVVTFLSAITAASQSQDGKLGQQLHGYLMKGMRSTLPVILGNALVVMYSRC 360
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVL 349
N+ A F ++ K+IVSWN ++ + LL+ ++ + G+ + T + VL
Sbjct: 361 GNVHAAFDLFDQLPEKDIVSWNTMVTAFVQNDFDFEGLLLVYQMHKSGFVADAVTLTAVL 420
Query: 350 RSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
++ LQ+ H +IR G E E + L+ Y+KSG I A
Sbjct: 421 SAASNTGDLQIGKQSHGYLIRHGIEG-EGLESYLINMYSKSGHIDMA------------- 466
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+ G N D V+WN +IA +G ++ + F+ M A
Sbjct: 467 --QRVFDGYGNDR----------------DEVTWNAMIAGYTQSGQPEQAVLAFRAMVEA 508
Query: 466 RIYPDNYTFVSLLSACSKLC-NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+ P + T S+L AC + + G +H + + ++ FV L+DMY KCG I
Sbjct: 509 GVEPTSVTLASVLPACEPVGEGVQAGKQIHSFALRHSL-DTNIFVGTALVDMYSKCGEIT 567
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
++ +F+ MT+++ +T+T +IS LG +GF RAL F M+ G KPD V +A ++AC
Sbjct: 568 AAENVFDRMTEKSTVTYTTMISGLGQHGFGDRALFLFYSMQDNGLKPDAVTFLAAISACN 627
Query: 585 HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL-I 643
+ GLV EG+ L+ M ++G+ H+ C+VDLL + G ++EA + ++ N + I
Sbjct: 628 YSGLVDEGLSLYRSM-ETFGLSATPQHHCCIVDLLAKAGRVEEAYDFVESLGEDGNFIAI 686
Query: 644 WRTFLEGCQ 652
W + L C+
Sbjct: 687 WGSLLASCK 695
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 240/476 (50%), Gaps = 17/476 (3%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ 60
P RNVVS+N+++ Y + G +AL MF+ M+ G PT +F + + S +P
Sbjct: 169 PKRNVVSWNTLVGWYVKTGRPYEALEMFMRMLEDGIRPTPVSFVNVFPAAASDDPSWPFF 228
Query: 61 LQASVLKNGL-FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
L ++K+G+ + +D FV ++ + ++ G + VF+ +K++ WN++++ + ++
Sbjct: 229 LYGMLIKHGVEYVSDLFVVSSAIAMFSEIGDVQSARMVFDHAAKKNIEVWNTMITGYVQN 288
Query: 120 GFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYELL 177
G + M LF +++ S+ V L +F+ I S QD + G+Q+HG ++K ++
Sbjct: 289 GQFSEAMDLFIQIMGSKGVPLDVVTFLSAITAASQSQDGKLGQQLHGYLMKGMRSTLPVI 348
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ N+LV MY +C + +A +F + +D+VSWNT++ A +++ + L L +M
Sbjct: 349 LGNALVVMYSRCGNVHAAFDLFDQLPEKDIVSWNTMVTAFVQNDFDFEGLLLVYQMHKSG 408
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ T V+++ + + +GK H +I++ +E + + S L++ Y+K +++ A
Sbjct: 409 FVADAVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGE-GLESYLINMYSKSGHIDMAQ 467
Query: 298 LCFSEISN-KNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRS---- 351
F N ++ V+WNA+I GY P L +++ G P T + VL +
Sbjct: 468 RVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLAFRAMVEAGVEPTSVTLASVLPACEPV 527
Query: 352 SLAFQL-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
Q Q+H +R + +V +L+ Y+K G I+ A + V +
Sbjct: 528 GEGVQAGKQIHSFALRHSLDTNIFVGTALVDMYSKCGEITAAENVFDRMTEKSTVTYTTM 587
Query: 411 IAGIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
I+G+ + G + + L ++ +PD V++ I+AC ++G E L L++ M
Sbjct: 588 ISGL-GQHGFGDRALFLFYSMQDNGLKPDAVTFLAAISACNYSGLVDEGLSLYRSM 642
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 194/423 (45%), Gaps = 46/423 (10%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNA--LECDVFVGSALVDFYAKC-----DNL 293
+ T+ + +CA + LG+S+HA +++ A L + ++L++ YA C +
Sbjct: 99 DHYTYSCALTACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARYRHGGV 158
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSS 352
+ F +N+VSWN L+ Y P ++ + + +L+ G RP +F +V ++
Sbjct: 159 DVVRRLFDATPKRNVVSWNTLVGWYVKTGRPYEALEMFMRMLEDGIRPTPVSFVNVFPAA 218
Query: 353 LAFQ---LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ L+ ++I+ G E +SD +A+
Sbjct: 219 ASDDPSWPFFLYGMLIKHGVE-----------------YVSDLFVVSSAI---------- 251
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+++ G + + +I WN +I NG + E ++LF + ++ P
Sbjct: 252 ---AMFSEIGDVQSARMVFDHAAKKNIEVWNTMITGYVQNGQFSEAMDLFIQIMGSKGVP 308
Query: 470 -DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
D TF+S ++A S+ + LG LHG + K + + N L+ MY +CG++ ++
Sbjct: 309 LDVVTFLSAITAASQSQDGKLGQQLHGYLMKGMRSTLPVILGNALVVMYSRCGNVHAAFD 368
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F+++ ++++++W +++A N F L +M GF D V L AVL+A + G
Sbjct: 369 LFDQLPEKDIVSWNTMVTAFVQNDFDFEGLLLVYQMHKSGFVADAVTLTAVLSAASNTGD 428
Query: 589 VREGMELFERMNRSYGVEPE-MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
++ G + + R +G+E E ++ Y ++++ + GH+ A+++ + + W
Sbjct: 429 LQIGKQSHGYLIR-HGIEGEGLESY--LINMYSKSGHIDMAQRVFDGYGNDRDEVTWNAM 485
Query: 648 LEG 650
+ G
Sbjct: 486 IAG 488
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 148/325 (45%), Gaps = 16/325 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
+P++++VS+N++++A+ + + + L + M GF T +LS S
Sbjct: 373 LPEKDIVSWNTMVTAFVQNDFDFEGLLLVYQMHKSGFVADAVTLTAVLSAAS----NTGD 428
Query: 61 LQASVLKNGLFCADAFVGTA----LLGLYGRHGCLDEVVSVFEDMPR-KSLVTWNSIVSI 115
LQ +G G L+ +Y + G +D VF+ + VTWN++++
Sbjct: 429 LQIGKQSHGYLIRHGIEGEGLESYLINMYSKSGHIDMAQRVFDGYGNDRDEVTWNAMIAG 488
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN-EQDLEFGEQIHGLVIKNGFDY 174
+ + G E + F +V + V T + V+ + ++ G+QIH +++ D
Sbjct: 489 YTQSGQPEQAVLAFRAMVEAGVEPTSVTLASVLPACEPVGEGVQAGKQIHSFALRHSLDT 548
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ V +LV+MY +C I +AE +F + + V++ T+I L + +AL L+ M
Sbjct: 549 NIFVGTALVDMYSKCGEITAAENVFDRMTEKSTVTYTTMISGLGQHGFGDRALFLFYSMQ 608
Query: 235 VDIVFPNQTTFVYVINSC--AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ + P+ TF+ I++C +GL + G S++ + L +VD AK
Sbjct: 609 DNGLKPDAVTFLAAISACNYSGLVDE--GLSLYRSMETFGLSATPQHHCCIVDLLAKAGR 666
Query: 293 LEGAHLCFSEISNKN--IVSWNALI 315
+E A+ + I W +L+
Sbjct: 667 VEEAYDFVESLGEDGNFIAIWGSLL 691
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 20/188 (10%)
Query: 427 LLSQLERPD-IVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYP--DNYTFVSLLSACS 482
LL L RP + N+++ A L L+ + AAR P D+YT+ L+AC+
Sbjct: 52 LLDALPRPPPTLLCNVLLIAYVAGALPDHALGLYGVLNHAARPPPRSDHYTYSCALTACA 111
Query: 483 KLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKC-----GSIGSSVKIFNEMTDR 536
+ L LG S+H L+++ + + N L+++Y C G + ++F+ R
Sbjct: 112 RSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARYRHGGVDVVRRLFDATPKR 171
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR----------HG 586
NV++W L+ G ALE F M G +P V+ + V A +G
Sbjct: 172 NVVSWNTLVGWYVKTGRPYEALEMFMRMLEDGIRPTPVSFVNVFPAAASDDPSWPFFLYG 231
Query: 587 GLVREGME 594
L++ G+E
Sbjct: 232 MLIKHGVE 239
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 167/582 (28%), Positives = 274/582 (47%), Gaps = 71/582 (12%)
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE--- 196
+E + V + S+ + G QIH L+ K G + + NSL+NMY +C I +A+
Sbjct: 52 SELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLF 111
Query: 197 ----------------------------KMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
K+F + + VS+ T+I ++ F +ALE
Sbjct: 112 DGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALE 171
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
++ M V PN T V VI++C+ L + + +H V+K + V V + L+ Y
Sbjct: 172 VFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYC 231
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASK-------------------SSPTSIFL 329
C + A F E+ +N+V+WN ++ GYA S T I
Sbjct: 232 LCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDG 291
Query: 330 LIE-------------LLQLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENY 372
I+ +LQ G+ PNE +++ R + QLH +++ G++ Y
Sbjct: 292 YIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCY 351
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
++ +++ YA G++ D + + + N + + + G + +K ++
Sbjct: 352 NFIQTTIIYFYAACGMM-DLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMH 410
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
D+ SW+ +I+ A + K LELF M A I P+ T VS+ SA + L L G
Sbjct: 411 VRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKL 470
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR--NVITWTALISALGL 550
H ++ I +D LIDMY KCGSI S+++ FN++ D +V W A+I L
Sbjct: 471 AHEYMRSESIPFNDNLRA-ALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLAS 529
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
+G A LE F +M+ KP+ + I VL+AC H GLV G +F+ M +Y VEP++
Sbjct: 530 HGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIK 589
Query: 611 HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
HY C++D+L R G L+EAE++I +MP + +IW T L C+
Sbjct: 590 HYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACR 631
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 136/624 (21%), Positives = 256/624 (41%), Gaps = 135/624 (21%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
NS+I+ Y++CG +++A Q F G + DS++ +++ +G
Sbjct: 92 NSLINMYAKCGDIKNA---------------QLLFDGFATLDSVS--------CNIMVSG 128
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
Y R+G +D +F+ MP K V++ +++ F ++GF + + +F
Sbjct: 129 ---------------YVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVF 173
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
++ V + + V VI S+ ++ +HGLV+K ++V+ +L++ Y C
Sbjct: 174 KDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLC 233
Query: 190 AGIWSAEKMFKDVEIR-------------------------------DVVSWNTIIGALA 218
+G+ A ++F ++ R DV+SW T+I
Sbjct: 234 SGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYI 293
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ +ALE+Y M PN+ V ++++C + G +H V+K +C F
Sbjct: 294 QKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNF 353
Query: 279 VGSALVDFYAKC---------------DNLEG----------------AHLCFSEISNKN 307
+ + ++ FYA C D+LE A F ++ ++
Sbjct: 354 IQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRD 413
Query: 308 IVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIR 366
+ SW+ +I GYA P ++ L ++L G +PNE T V + LQ
Sbjct: 414 VFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQ------- 466
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
G L Y + S+++ F L RA + +Y + G N ++
Sbjct: 467 ---------EGKLAHEYMR----SESIPFNDNL---RAA-----LIDMYAKCGSINSALQ 505
Query: 427 LLSQL--ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+Q+ E + WN +I A +G LE+F M+ I P+ TF+ +LSAC
Sbjct: 506 FFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHA 565
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTA 543
+ G + +K + D +ID+ G+ G + + ++ M + +++ W
Sbjct: 566 GLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGT 625
Query: 544 LISALGLNG---FAQRALEKFREM 564
L++A +G +RA E +
Sbjct: 626 LLAACRTHGNVNIGERAAENLARL 649
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 119/518 (22%), Positives = 215/518 (41%), Gaps = 94/518 (18%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP++ VS+ ++I + + G+ +AL +F M + G P T ++S C L V
Sbjct: 145 MPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNC 204
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ ++ V T L+ Y + E +F++MP ++LVTWN +++ + K
Sbjct: 205 RMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKT 264
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF-------------------- 159
G V++ LF + +V + G I + LE
Sbjct: 265 GLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLV 324
Query: 160 -----------GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI---------------- 192
G Q+HG V+K GFD + +++ Y C +
Sbjct: 325 SACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLE 384
Query: 193 -WS--------------AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
W+ A K F + +RDV SW+T+I A+SE+ ALEL+ +M
Sbjct: 385 SWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGG 444
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ PN+ T V V ++ A L GK H + ++ + + +AL+D YAKC ++ A
Sbjct: 445 IKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSAL 504
Query: 298 LCFSEISNK--NIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLA 354
F++I ++ ++ WNA+I G AS + + ++ + +PN TF VL +
Sbjct: 505 QFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCH 564
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
L+ E+ + + ++ ++Y N+ + + I
Sbjct: 565 AGLV-----------ESGKRIFKTMKSAY----------------NVEPDIKHYGCMIDI 597
Query: 415 YNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
R G E +++ + DIV W ++AAC +G+
Sbjct: 598 LGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACRTHGN 635
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 174/588 (29%), Positives = 273/588 (46%), Gaps = 79/588 (13%)
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDY-ELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
V ++ +D G IH +IK+G Y + + N+L+N+Y + A ++F ++
Sbjct: 16 VHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMP 75
Query: 204 IRDVVSWNTIIGALAESEN-------------------------------FGKALELYLR 232
++ SWNTI+ A A++ N F A+ +LR
Sbjct: 76 LKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLR 135
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC-- 290
M + P Q TF V+ SCA Q +GK +H+ V+K V V ++L++ YAKC
Sbjct: 136 MVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGD 195
Query: 291 -------------------DNLEGAHL----------CFSEISNKNIVSWNALILGYASK 321
+ + H+ F ++++ +IVSWN++I GY +
Sbjct: 196 SVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQ 255
Query: 322 SSPTSIFLLIELL--QLGYRPNEFTFSHVL-----RSSLAFQLLQLHCLIIRMGYENYEY 374
+ +P++FT VL R SL Q+H I+R +
Sbjct: 256 GYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGK-QIHAHIVRADVDIAGA 314
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA--NIIAGIYNRTGQYNETVKLLSQLE 432
V +L++ YAKSG + A V P V A +++ G Y + G + + L+
Sbjct: 315 VGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDG-YFKIGDIDPARAIFDSLK 373
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
D+V+W +I A NG + L LF+ M P+NYT ++LS S L +L G
Sbjct: 374 HRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQ 433
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLN 551
LH + + E +SS + V N LI MY + GSI + KIFN + R+ +TWT++I +L +
Sbjct: 434 LHAVAIRLEEVSSVS-VGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQH 492
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G A+E F +M + KPD + + VL+AC H GLV +G F M + +EP H
Sbjct: 493 GLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSH 552
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKY 659
Y C++DLL R G L+EA I MP P+ + W + L CR+ KY
Sbjct: 553 YACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSS---CRVHKY 597
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 165/654 (25%), Positives = 285/654 (43%), Gaps = 146/654 (22%)
Query: 52 SLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNS 111
S +P G + A ++K+GL F+ LL LY + G + +F++MP K+ +WN+
Sbjct: 25 SRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNT 84
Query: 112 IVSIFGKHGFVEDCMFLFCE-------------------------------LVRSEVALT 140
I+S K G ++ +F E +V S ++ T
Sbjct: 85 ILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPT 144
Query: 141 ESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
+ +F V+ + Q L+ G+++H V+K G + VANSL+NMY +C A+ +F
Sbjct: 145 QFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFD 204
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMS-VDIVF-------------------- 239
+ ++D +WNT+I + F AL L+ +M+ DIV
Sbjct: 205 RMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALET 264
Query: 240 -----------PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
P++ T V+++CA ++ LGK IHA +++ ++ VG+AL+ YA
Sbjct: 265 FSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYA 324
Query: 289 KCDNLEGAH---------------------------------LCFSEISNKNIVSWNALI 315
K +E AH F + ++++V+W A+I
Sbjct: 325 KSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMI 384
Query: 316 LGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLR--SSLAF--QLLQLHCLIIRMGYE 370
+GYA + +L L+ + G +PN +T + VL SSLA QLH + IR+
Sbjct: 385 VGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEV 444
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ V +L+T Y++SG I DA I+N Y +T
Sbjct: 445 SSVSVGNALITMYSRSGSIKDA-------------------RKIFNHICSYRDT------ 479
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
++W +I + A +G E +ELF+ M + PD+ T+V +LSAC+ + + G
Sbjct: 480 ------LTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQG 533
Query: 491 SSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISA 547
S L+K I +S + C +ID+ G+ G + + M + +V+ W +L+S+
Sbjct: 534 KSYFNLMKNVHNIEPTSSHYAC--MIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSS 591
Query: 548 LGLNGFAQRALEKFREMEFLGFKPDR----VALIAVLTAC---RHGGLVREGME 594
++ + L K + L P+ +AL L+AC VR+ M+
Sbjct: 592 CRVHKYVD--LAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMK 643
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 188/421 (44%), Gaps = 72/421 (17%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P + VS+ ++I Y+ G + A+ FL M++ G PTQFTF +L SC + ++ G
Sbjct: 105 IPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVG 164
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHG----------------------------- 89
++ + V+K G V +LL +Y + G
Sbjct: 165 KKVHSFVVKLGQ-SGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQ 223
Query: 90 -C-LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFV-- 145
C D +++F+ M +V+WNSI++ + G+ + F +++S +L F
Sbjct: 224 FCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSS-SLKPDKFTLG 282
Query: 146 GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM-------------------- 185
V+ +N + L+ G+QIH +++ D V N+L++M
Sbjct: 283 SVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTP 342
Query: 186 -------------YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
YF+ I A +F ++ RDVV+W +I A++ AL L+
Sbjct: 343 SLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRL 402
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M + PN T V++ + L + GK +HA I+ V VG+AL+ Y++ +
Sbjct: 403 MIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGS 462
Query: 293 LEGAHLCFSEI-SNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLR 350
++ A F+ I S ++ ++W ++IL A +I L ++L++ +P+ T+ VL
Sbjct: 463 IKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLS 522
Query: 351 S 351
+
Sbjct: 523 A 523
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 157/502 (31%), Positives = 255/502 (50%), Gaps = 19/502 (3%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCA-----GIWSAEKMFKDVEIRDVVSWNTIIGA 216
Q+H ++ +G D V + ++ Y CA G+W A ++F + D +N++I A
Sbjct: 30 QLHAHLVVHGVDD---VTSQILASY--CALPAGGGVWYARQLFDRIPDPDRFVYNSLIRA 84
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
S +AL L M + PN+ T +++ +CA +Q H V+K
Sbjct: 85 YCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQ 144
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQ 335
VFVG+AL+ YA +L + F E+ ++N+VSWN++I GYA + L E + +
Sbjct: 145 VFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRR 204
Query: 336 LGYRPNEFTFSHVL-----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
G +EFT +L +L F L L++R G + +L+ Y K G +
Sbjct: 205 QGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVR-GCRIDLILANALVDMYGKCGDLL 263
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
A + AV +++ + R + Q+ I+SWN +I+ G
Sbjct: 264 MAHTCFDMMPFKNAVSWTSMLCALAKRA-SIDAARDWFEQIPEKSIISWNAMISCYVQGG 322
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
+ E L+L+ M+ + PD +T ++LSAC +L +LA G +H I+ + +
Sbjct: 323 RFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDN-FHNPGVALF 381
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
N L+DMY +CG + +++ +F+EM +NVI+W A+I AL ++G AQ AL FR M F F
Sbjct: 382 NSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVFDAFP 441
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
PD + +A+L+AC HGGL+ G F+ M Y V+P ++HY C+VDLL R G L +A
Sbjct: 442 PDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVD 501
Query: 631 IITTMPFPPNALIWRTFLEGCQ 652
+I MP P+ ++W L C+
Sbjct: 502 LIKDMPMRPDVVVWGALLGACR 523
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 224/499 (44%), Gaps = 68/499 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+PD + +NS+I AY ++AL + MI RG P +FT LL +C + E
Sbjct: 70 IPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHV 129
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ V+ F FVG ALL Y G L + F++M +++V+WNS+++ + +
Sbjct: 130 MVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQA 189
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + LF + R + E + V ++ S E +LEFG+ +H ++ G +L++A
Sbjct: 190 GNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILA 249
Query: 180 NSLVNMYFQC-------------------------------AGIWSAEKMFKDVEIRDVV 208
N+LV+MY +C A I +A F+ + + ++
Sbjct: 250 NALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSII 309
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SWN +I + F +AL+LY RM + + P++ T V+++C L + GK IH +
Sbjct: 310 SWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCI 369
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
N V + ++L+D YA+C ++ A FSE+ +KN++SWNA+I A
Sbjct: 370 RDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDAL 429
Query: 329 LLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
+ + + P+E TF +L + LL E +Y ++ Y
Sbjct: 430 MFFRSMVFDAFPPDEITFVALLSACNHGGLL-----------EAGQYYFQAMRHVY---- 474
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
N+ V + + R GQ + V L+ + RPD+V W ++ AC
Sbjct: 475 ------------NVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGAC 522
Query: 447 AHNGD-------YKEVLEL 458
+G K++LEL
Sbjct: 523 RIHGHIQIGKQVIKQLLEL 541
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 124/528 (23%), Positives = 244/528 (46%), Gaps = 25/528 (4%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
+F+ +P +NS++ + ++ + L ++R + E + ++ + Q
Sbjct: 65 QLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQ 124
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
E HG+V+K GF ++ V N+L++ Y + + + F ++ R+VVSWN++I
Sbjct: 125 AWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIN 184
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
A++ N +A L+ M + ++ T V ++ +C+ N GK +H+ ++
Sbjct: 185 GYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRI 244
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
D+ + +ALVD Y KC +L AH CF + KN VSW +++ A ++S + E +
Sbjct: 245 DLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQI- 303
Query: 336 LGYRPNEFTFSH------VLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG-- 387
P + S ++ + L L+ + +G E+ L +++++ + G
Sbjct: 304 ----PEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDL 359
Query: 388 ----LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
+I D + + P V N + +Y R GQ + + L S++ +++SWN +I
Sbjct: 360 ASGKMIHDCIR--DNFHNP-GVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAII 416
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
A A +G ++ L F+ M PD TFV+LLSAC+ L G ++ +
Sbjct: 417 GALAMHGRAQDALMFFRSMVFDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNV 476
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFR 562
++D+ G+ G + +V + +M R +V+ W AL+ A ++G Q + +
Sbjct: 477 KPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIK 536
Query: 563 E-MEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
+ +E G LI+ + H E M+ ++ R +G++ M
Sbjct: 537 QLLELEGMSGGLFVLISNMLYETH---QWEDMKRLRKLMREWGMKKNM 581
>gi|356571125|ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g05240-like [Glycine max]
Length = 552
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 149/465 (32%), Positives = 236/465 (50%), Gaps = 32/465 (6%)
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
+A+ +F+ ++ V WN++I + N ++ LY ++ + P+ TF +V+ +C
Sbjct: 45 NADLVFRQIDAPSVYIWNSMIRGFVNNHNPRMSMLLYRQLIENGYSPDHFTFPFVLKACC 104
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+ + GK IH ++K+ E D + + L+ Y C +++ F I N+V+W
Sbjct: 105 AIADQDCGKCIHCCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVVAWTC 164
Query: 314 LILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVL---RSSLAFQLLQ-LHCLIIRMG 368
LI GY + + P ++ + ++ G PNE T + L S F Q +H I + G
Sbjct: 165 LIAGYVNNNQPYEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQHIRKAG 224
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
Y+ F++ N ++ A I +Y + G + L
Sbjct: 225 YD-----------------------PFMSTSN--SNIILATAILEMYAKCGSFKIARDLF 259
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
+++ + +IVSWN +I A +KE L+LF M + IYPD TF+S+LS C+ LC LA
Sbjct: 260 NKMPQRNIVSWNSMINAYNQYERHKEALDLFFDMWTSGIYPDKATFLSVLSVCAHLCALA 319
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
LG ++H + KT I +D + L+DMY K G +GS+ KIF+ + R+V+ WT++I+ L
Sbjct: 320 LGQTVHAYLXKTGI-GTDISLATALLDMYAKTGGLGSAQKIFSSLQKRDVVMWTSMINGL 378
Query: 549 GLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
++G AL F+ M E PD + I VL AC H GLV E + F M Y + P
Sbjct: 379 AMHGDGNEALGMFQTMHEDSSLVPDHITYIGVLFACSHVGLVEEAKKHFRLMTEMYSIVP 438
Query: 608 EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+HY C+VDLL R GH EAE+++ TM PN I L GCQ
Sbjct: 439 GREHYGCMVDLLSRSGHFGEAERLMETMAIQPNISIXGALLYGCQ 483
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/482 (23%), Positives = 226/482 (46%), Gaps = 20/482 (4%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQ 62
+V +NS+I + ++ ++ +I G+ P FTF +L C + G +
Sbjct: 57 SVYIWNSMIRGFVNNHNPRMSMLLYRQLIENGYSPDHFTFPFVLKACCAIADQDCGKCIH 116
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
++K+G F ADA+ T LL +Y + + VF+++P ++V W +++ + +
Sbjct: 117 CCIVKSG-FEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVVAWTCLIAGYVNNNQP 175
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD-------YE 175
+ + +F ++ V E + V + + +D + G+ +H + K G+D
Sbjct: 176 YEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQHIRKAGYDPFMSTSNSN 235
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+++A +++ MY +C A +F + R++VSWN++I A + E +AL+L+ M
Sbjct: 236 IILATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAYNQYERHKEALDLFFDMWT 295
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
++P++ TF+ V++ CA L LG+++HA + K + D+ + +AL+D YAK L
Sbjct: 296 SGIYPDKATFLSVLSVCAHLCALALGQTVHAYLXKTGIGTDISLATALLDMYAKTGGLGS 355
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR--PNEFTFSHVLRSSL 353
A FS + +++V W ++I G A + + + P+ T+ VL +
Sbjct: 356 AQKIFSSLQKRDVVMWTSMINGLAMHGDGNEALGMFQTMHEDSSLVPDHITYIGVLFACS 415
Query: 354 AFQLLQLHCLIIRMGYENYEYV-----LGSLMTSYAKSGLISDALAFVTALNI-PRAVVP 407
L++ R+ E Y V G ++ ++SG +A + + I P +
Sbjct: 416 HVGLVEEAKKHFRLMTEMYSIVPGREHYGCMVDLLSRSGHFGEAERLMETMAIQPNISIX 475
Query: 408 ANIIAG--IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
++ G I+ N+ + L++LE + ++ A G +++V K M+
Sbjct: 476 GALLYGCQIHENLXVANQVKERLTELESCQSGAHVLLSNIYAKAGRWEDVNGTRKVMKHK 535
Query: 466 RI 467
RI
Sbjct: 536 RI 537
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 223/483 (46%), Gaps = 43/483 (8%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF + S+ WNS++ F + M L+ +L+ + + +F V+ D
Sbjct: 49 VFRQIDAPSVYIWNSMIRGFVNNHNPRMSMLLYRQLIENGYSPDHFTFPFVLKACCAIAD 108
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
+ G+ IH ++K+GF+ + A L++MY CA + S K+F ++ I +VV+W +I
Sbjct: 109 QDCGKCIHCCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVVAWTCLIAG 168
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE-- 274
+ +AL+++ MS V PN+ T V + CA ++ G+ +H + K +
Sbjct: 169 YVNNNQPYEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQHIRKAGYDPF 228
Query: 275 -----CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIF 328
++ + +A+++ YAKC + + A F+++ +NIVSWN++I Y + ++
Sbjct: 229 MSTSNSNIILATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAYNQYERHKEALD 288
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSY-AKSG 387
L ++ G P++ TF VL S+ L L LG + +Y K+G
Sbjct: 289 LFFDMWTSGIYPDKATFLSVL--SVCAHLCAL--------------ALGQTVHAYLXKTG 332
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
+ +D ++ TAL +Y +TG K+ S L++ D+V W +I A
Sbjct: 333 IGTD-ISLATAL------------LDMYAKTGGLGSAQKIFSSLQKRDVVMWTSMINGLA 379
Query: 448 HNGDYKEVLELFKYMRA-ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
+GD E L +F+ M + + PD+ T++ +L ACS + + L+ + I
Sbjct: 380 MHGDGNEALGMFQTMHEDSSLVPDHITYIGVLFACSHVGLVEEAKKHFRLMTEMYSIVPG 439
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLN---GFAQRALEKFR 562
++D+ + G G + ++ M N+ AL+ ++ A + E+
Sbjct: 440 REHYGCMVDLLSRSGHFGEAERLMETMAIQPNISIXGALLYGCQIHENLXVANQVKERLT 499
Query: 563 EME 565
E+E
Sbjct: 500 ELE 502
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 186/408 (45%), Gaps = 47/408 (11%)
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC--DNLEGAHLCFSEISNKNIVSWNA 313
QN+IL K ++ + + S L+DF ++ A L F +I ++ WN+
Sbjct: 4 QNTILSLLARCKSMRELKKLRGLILSKLIDFCVDSXFGDINNADLVFRQIDAPSVYIWNS 63
Query: 314 LILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMG 368
+I G+ + +P S+ L +L++ GY P+ FTF VL++ A +HC I++ G
Sbjct: 64 MIRGFVNNHNPRMSMLLYRQLIENGYSPDHFTFPFVLKACCAIADQDCGKCIHCCIVKSG 123
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
+E Y L+ Y + L NIP I+N
Sbjct: 124 FEADAYTATGLLHMYVSCADMKSGLKVFD--NIP-----------IWN------------ 158
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
+V+W +IA +N E L++FK M + P+ T V+ L C++ +
Sbjct: 159 -------VVAWTCLIAGYVNNNQPYEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFD 211
Query: 489 LGSSLHGLIKKT------EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
G +H I+K +S+ + +++MY KCGS + +FN+M RN+++W
Sbjct: 212 TGQWVHQHIRKAGYDPFMSTSNSNIILATAILEMYAKCGSFKIARDLFNKMPQRNIVSWN 271
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
++I+A + AL+ F +M G PD+ ++VL+ C H + G + + ++
Sbjct: 272 SMINAYNQYERHKEALDLFFDMWTSGIYPDKATFLSVLSVCAHLCALALGQTVHAYLXKT 331
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G+ ++ ++D+ + G L A+KI +++ + ++W + + G
Sbjct: 332 -GIGTDISLATALLDMYAKTGGLGSAQKIFSSLQ-KRDVVMWTSMING 377
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 139/262 (53%), Gaps = 9/262 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEGA 59
+P NVV++ +I+ Y +AL++F M + G EP + T L+ C +
Sbjct: 154 IPIWNVVAWTCLIAGYVNNNQPYEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTG 213
Query: 60 Q-LQASVLKNG------LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
Q + + K G ++ + TA+L +Y + G +F MP++++V+WNS+
Sbjct: 214 QWVHQHIRKAGYDPFMSTSNSNIILATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNSM 273
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
++ + ++ ++ + LF ++ S + +++F+ V+ ++ L G+ +H + K G
Sbjct: 274 INAYNQYERHKEALDLFFDMWTSGIYPDKATFLSVLSVCAHLCALALGQTVHAYLXKTGI 333
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
++ +A +L++MY + G+ SA+K+F ++ RDVV W ++I LA + +AL ++
Sbjct: 334 GTDISLATALLDMYAKTGGLGSAQKIFSSLQKRDVVMWTSMINGLAMHGDGNEALGMFQT 393
Query: 233 MSVD-IVFPNQTTFVYVINSCA 253
M D + P+ T++ V+ +C+
Sbjct: 394 MHEDSSLVPDHITYIGVLFACS 415
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 143/324 (44%), Gaps = 44/324 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP RN+VS+NS+I+AY++ ++AL +F M G P + TF +LS C L + G
Sbjct: 262 MPQRNIVSWNSMINAYNQYERHKEALDLFFDMWTSGIYPDKATFLSVLSVCAHLCALALG 321
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A + K G+ D + TALL +Y + G L +F + ++ +V W S+++
Sbjct: 322 QTVHAYLXKTGI-GTDISLATALLDMYAKTGGLGSAQKIFSSLQKRDVVMWTSMINGLAM 380
Query: 119 HGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
HG + + +F + S + +++GV+ S+ GLV + + L+
Sbjct: 381 HGDGNEALGMFQTMHEDSSLVPDHITYIGVLFACSHV----------GLVEEAKKHFRLM 430
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+M+ V R+ + ++ L+ S +FG+A L M++
Sbjct: 431 T------------------EMYSIVPGRE--HYGCMVDLLSRSGHFGEAERLMETMAIQ- 469
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE-CDVFVGSALVDFYAKCDNLEGA 296
PN + ++ C +N + + ++ + LE C L + YAK E
Sbjct: 470 --PNISIXGALLYGCQIHENLXVANQVKERLTE--LESCQSGAHVLLSNIYAKAGRWEDV 525
Query: 297 HLCFSEISNKNIVSWNALILGYAS 320
+ + +K I I+G++S
Sbjct: 526 NGTRKVMKHKRITK----IIGHSS 545
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 278/584 (47%), Gaps = 71/584 (12%)
Query: 106 LVTWNSIVSIFGKHGFVEDCMFLFCELVR--SEVALTESSFVGVIHGLSNEQDLEFGEQI 163
+V N+ + F + GF L E V S ++ + + + G+ +
Sbjct: 1 MVCRNNFLIQFSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGL 60
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H ++K G +L N L+NMY + + A K+F ++ R+ +S+ T+I AES F
Sbjct: 61 HCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRF 120
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
+A+EL++R+ + N F ++ LG IHA + K E + FVG+AL
Sbjct: 121 LEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTAL 180
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNE 342
+D Y+ C ++ A F I K++VSW ++ +A ++ L ++ +G++PN
Sbjct: 181 IDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNN 240
Query: 343 FTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
FTF+ V ++ L + + H ++ YE YV +L+ Y KSG I DA
Sbjct: 241 FTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDAR----- 295
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
+ ++ + D++ W+ +IA A + KE +E+
Sbjct: 296 ---------------------------RAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEM 328
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYG 518
F MR A + P+ +TF S+L AC+ + L LG+ +H + K + SD FV N L+D+Y
Sbjct: 329 FFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGL-HSDVFVSNALMDVYA 387
Query: 519 KCGSIGSSVKIFNEMTDRNVITWTALISA------------LGLNGFAQR---------- 556
KCG + +S+++F E RN +TW +I L LN R
Sbjct: 388 KCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSS 447
Query: 557 ---------ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
ALE ++ L KPD++ + VL+AC + GL+ +G F M + +G+EP
Sbjct: 448 ALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEP 507
Query: 608 EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
++HY C+V LL R GHL +A K+I +PF P+ ++WR L C
Sbjct: 508 CIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGAC 551
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 134/495 (27%), Positives = 247/495 (49%), Gaps = 27/495 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS------CDSLN 54
MP+RN +SF ++I Y+ +A+ +F+ + G E F F +L C L
Sbjct: 99 MPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGEL- 157
Query: 55 PVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
G + A + K G ++AFVGTAL+ Y G +D VF+ + K +V+W +V+
Sbjct: 158 ---GWGIHACIFKLG-HESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVT 213
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
F ++ ++ + LF ++ +F V + + G+ +HG +K+ ++
Sbjct: 214 CFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYEL 273
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+L V +L+++Y + I A + F+++ +DV+ W+ +I A+S+ +A+E++ +M
Sbjct: 274 DLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMR 333
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+V PNQ TF V+ +CA ++ LG IH VIK L DVFV +AL+D YAKC +E
Sbjct: 334 QALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRME 393
Query: 295 GAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
+ F+E ++N V+WN +I+G+ ++ L + +L+ + E T+S LR+
Sbjct: 394 NSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACA 453
Query: 354 AFQL----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA- 408
+ LQ+H L ++ + VL ++ A +GL+ A+ T++ + P
Sbjct: 454 SLAALEPGLQIHSLTVKPDKLTFVGVL----SACANAGLLDQGQAYFTSMIQDHGIEPCI 509
Query: 409 ---NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+ + R G ++ VKL+ ++ +P ++ W ++ AC + D + L R
Sbjct: 510 EHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIE--LGRISAQRV 567
Query: 465 ARIYPDNYTFVSLLS 479
+ P + LLS
Sbjct: 568 LEMEPQDKATHVLLS 582
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 152/593 (25%), Positives = 270/593 (45%), Gaps = 57/593 (9%)
Query: 6 VVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFT----FGGLLSC-DSLNPVEGAQ 60
+V N+ + +SR G+ + ++ + P++F L C P G
Sbjct: 1 MVCRNNFLIQFSRRGFSVQSAKLTQEFVGH-VSPSEFNSHAYANALQDCIQKDEPSRGKG 59
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L +LK G C D F LL +Y + L + +F++MP ++ +++ +++ + +
Sbjct: 60 LHCEILKRG-GCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESV 118
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + LF L R L F ++ L + E G IH + K G + V
Sbjct: 119 RFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGT 178
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L++ Y C + A ++F + +D+VSW ++ AE++ F +AL+L+ +M + P
Sbjct: 179 ALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKP 238
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N TF V +C GL+ +GKS+H +K+ E D++VG AL+D Y K +++ A F
Sbjct: 239 NNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAF 298
Query: 301 SEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL- 358
EI K+++ W+ +I YA S S ++ + ++ Q PN+FTF+ VL++ + L
Sbjct: 299 EEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLN 358
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
Q+HC +I++G + +V +LM YAK G + +++
Sbjct: 359 LGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSM---------------------- 396
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+L ++ + V+WN VI GD ++ L LF M R+ T+
Sbjct: 397 ----------ELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYS 446
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S L AC+ L L G +H L K + + TFV ++ G + F M
Sbjct: 447 SALRACASLAALEPGLQIHSLTVKPDKL---TFVG--VLSACANAGLLDQGQAYFTSMIQ 501
Query: 536 RNVIT-----WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ I +T ++ LG G +A++ E+ F+P + A+L AC
Sbjct: 502 DHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIP---FQPSVMVWRALLGAC 551
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 166/568 (29%), Positives = 262/568 (46%), Gaps = 48/568 (8%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F+ +P + +N+++ + G R +F V+ S D
Sbjct: 85 LFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSALLD 144
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L +H + G +L V+ +LV++Y +CA A +F+ + RDVV+WN ++
Sbjct: 145 LRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAG 204
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
A + + L M D PN +T V ++ A G+++HA ++ D
Sbjct: 205 YALHGKYSDTIACLLLMQDDHA-PNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHD 263
Query: 277 ----VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLI 331
V VG+AL+D YAKC +L A F ++ +N V+W+AL+ G+ F L
Sbjct: 264 HKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFK 323
Query: 332 ELLQLGY---RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYA 384
++L G P + + LR+ L QLH L+ + G SL++ YA
Sbjct: 324 DMLAQGLCFLSPT--SVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYA 381
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
K+GLI ++ L Q+ D VS++ +++
Sbjct: 382 KAGLI--------------------------------DQATTLFDQMVVKDTVSYSALVS 409
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
NG E +F+ M+A + PD T VSL+ ACS L L G HG + I+
Sbjct: 410 GYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVI-VRGIA 468
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
S+T +CN LIDMY KCG I S +IF+ M R++++W +I+ G++G + A F +M
Sbjct: 469 SETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDM 528
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
+ +PD V I +++AC H GLV EG F M YG+ P M+HY +VDLL R G
Sbjct: 529 KHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGF 588
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L EA + I MP + +W L C+
Sbjct: 589 LDEAYQFIQGMPLKADVRVWGALLGACR 616
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 136/557 (24%), Positives = 249/557 (44%), Gaps = 41/557 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+P + +N++I AYS G R +P +TF +L +C +L + A
Sbjct: 89 IPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSALLDLRSA 148
Query: 60 Q-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + + GL AD FV TAL+ +Y + +VF MP + +V WN++++ +
Sbjct: 149 RAVHCHAARAGLH-ADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYAL 207
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK--NGFDYE- 175
HG D + L++ + A S+ V ++ L+ L G +H ++ + D++
Sbjct: 208 HGKYSDTIACLL-LMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKD 266
Query: 176 -LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM- 233
+LV +L++MY +C + A ++F+ + +R+ V+W+ ++G +A L+ M
Sbjct: 267 GVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDML 326
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ + F + T+ + +CA L + LGK +HA + K+ L D+ G++L+ YAK +
Sbjct: 327 AQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLI 386
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSS 352
+ A F ++ K+ VS++AL+ GY F + +Q +P+ T ++ +
Sbjct: 387 DQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPAC 446
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
LQ + K G S V I N +
Sbjct: 447 SHLAALQ-----------------------HGKCGHGS-----VIVRGIASETSICNALI 478
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G+ + + ++ + DIVSWN +IA +G KE LF M+ PD+
Sbjct: 479 DMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDV 538
Query: 473 TFVSLLSACSKLCNLALGSS-LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+ L+SACS + G H + K I M +D+ + G + + +
Sbjct: 539 TFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGM-VDLLARGGFLDEAYQFIQ 597
Query: 532 EMTDR-NVITWTALISA 547
M + +V W AL+ A
Sbjct: 598 GMPLKADVRVWGALLGA 614
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 111/223 (49%), Gaps = 5/223 (2%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQL- 61
++ VS+++++S Y + G ++A R+F M +P T L+ +C L ++ +
Sbjct: 399 KDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCG 458
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
SV+ G+ ++ + AL+ +Y + G +D +F+ MP + +V+WN++++ +G HG
Sbjct: 459 HGSVIVRGI-ASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGL 517
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ-IHGLVIKNGFDYELLVAN 180
++ LF ++ + +F+ +I S+ + G++ H + K G +
Sbjct: 518 GKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYI 577
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESEN 222
+V++ + + A + + + ++ DV W ++GA +N
Sbjct: 578 GMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKN 620
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 163/607 (26%), Positives = 284/607 (46%), Gaps = 43/607 (7%)
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGC--LDEVVSVFEDMPRKSLVTWNSIV 113
V A+ AS+LK+G + LL Y R L VF+++PR+ V+WN+++
Sbjct: 8 VAAARSHASLLKSGFAAPTPW--NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALL 65
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
+ G + L + +A + + + + G Q+ L +K+G
Sbjct: 66 AAHAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLA 125
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ A++L+++Y +C + A ++F + R+ VSWN +I ES + ALEL+L M
Sbjct: 126 NNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEM 185
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ + P++ TF ++ + G + L +H K++K + V +A + Y++C +L
Sbjct: 186 EREGLVPDEATFASLLTAVEG-PSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSL 244
Query: 294 EGAHLCFSEISN-KNIVSWNALILGYASKS-SPTSIFLLIELLQ-LGYRPNEFTFSHVLR 350
+ + F I + ++++SWNA++ Y ++ + ++Q G P+ ++F+ ++
Sbjct: 245 KDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIIS 304
Query: 351 SSLAF-----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
S Q +H L+I+ E V +L+ Y +
Sbjct: 305 SCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTR-------------------- 344
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
YN + K + L D VSWN ++ + +G + L+ F+ M +
Sbjct: 345 ---------YNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSE 395
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ D Y F + L + S+L L LG +HGL+ + S+D FV + LI MY K G I
Sbjct: 396 NVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASND-FVSSSLIFMYSKSGIIDD 454
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ K F E + + W A+I +G A+ F EM D + + ++T+C H
Sbjct: 455 ARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSH 514
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GLV EG E+ M YGV M+HY C VDL R G L +A+K+I +MPF P+A++W
Sbjct: 515 AGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWM 574
Query: 646 TFLEGCQ 652
T L C+
Sbjct: 575 TLLGACR 581
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 155/568 (27%), Positives = 283/568 (49%), Gaps = 52/568 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
+P R+ VS+N++++A++ G +A R+ M +G F G L ++ P G
Sbjct: 53 VPRRDEVSWNALLAAHAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIG 112
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
AQLQ+ LK+GL + F +ALL +Y + G + + VF+ MP ++ V+WN++++ + +
Sbjct: 113 AQLQSLALKSGL-ANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTE 171
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + LF E+ R + E++F ++ + Q+HG ++K G L V
Sbjct: 172 SGDMASALELFLEMEREGLVPDEATFASLLTAVEGPSCF-LMHQLHGKIVKYGSALGLTV 230
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
N+ + Y QC + + ++F + +IRD++SWN ++GA + +A++ ++RM +
Sbjct: 231 LNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQES 290
Query: 238 -VFPNQTTFVYVINSCAGL-QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN--- 292
V P+ +F +I+SC+ + G+ IH VIK+ALE V +AL+ Y + +
Sbjct: 291 GVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCM 350
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
+E A+ CF+ + K+ VSWN+++ GY+ S ++ + R +E+ FS LRS
Sbjct: 351 MEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRS 410
Query: 352 SLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
S +LQL H L+I G+ + ++V SL+ Y+KSG+I DA
Sbjct: 411 SSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDAR-------------- 456
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
K + ++ V WN +I A +G + V LF M +
Sbjct: 457 ------------------KSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKA 498
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLI--KKTEIISSDTFVCNMLIDMYGKCGSIGS 525
D+ TFV L+++CS + GS + + K + + + C +D+YG+ G +
Sbjct: 499 PLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACG--VDLYGRAGQLDK 556
Query: 526 SVKIFNEMT-DRNVITWTALISALGLNG 552
+ K+ + M + + + W L+ A ++G
Sbjct: 557 AKKLIDSMPFEPDAMVWMTLLGACRIHG 584
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 225/495 (45%), Gaps = 51/495 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGA- 59
MP+RN VS+N++I+ Y+ G + AL +FL M G P + TF LL+ VEG
Sbjct: 154 MPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPDEATFASLLTA-----VEGPS 208
Query: 60 -----QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-KSLVTWNSIV 113
QL ++K G + A+ Y + G L + +F+ + + L++WN+++
Sbjct: 209 CFLMHQLHGKIVKYGSALGLTVLNAAITA-YSQCGSLKDSRRIFDGIGDIRDLISWNAML 267
Query: 114 SIFGKHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNE-QDLEFGEQIHGLVIKNG 171
+ +G ++ M F +++ S V SF +I S D G IHGLVIK+
Sbjct: 268 GAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSA 327
Query: 172 FDYELLVANSLVNMYFQ----CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKAL 227
+ V N+L+ MY + C + A K F + ++D VSWN+++ ++ AL
Sbjct: 328 LEGVTPVCNALIAMYTRYNENCM-MEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADAL 386
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
+ + M + V ++ F + S + L LGK IH VI + + FV S+L+ Y
Sbjct: 387 KFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMY 446
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFS 346
+K ++ A F E + V WNA+I GYA ++ +L E+LQ + TF
Sbjct: 447 SKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFV 506
Query: 347 HVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
++ S H ++ G E +L ++ T Y +P +
Sbjct: 507 GLITSC-------SHAGLVDEGSE----ILNTMETKYG----------------VPLRME 539
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+Y R GQ ++ KL+ + PD + W ++ AC +G+ + ++ ++ A
Sbjct: 540 HYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVA 599
Query: 466 RIYPDNYTFVSLLSA 480
P ++ LLS+
Sbjct: 600 E--PRQHSTYVLLSS 612
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 153/498 (30%), Positives = 253/498 (50%), Gaps = 39/498 (7%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
G IH ++ NGF + ++ L+ Y + SA K+F + R VVSW+ I ++
Sbjct: 16 GHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQISGYSQ 75
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ + AL ++L M NQ T+ V+ +C GL+ G I + K+ ++ V
Sbjct: 76 NGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNLIV 135
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGY 338
SAL+D ++KC +E A F + +++VSWNA+I YA + S S + ++Q G
Sbjct: 136 QSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQEGM 195
Query: 339 RPNEFTFSHVLRSS----LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
P+ FTF VL++S ++ Q+H LII++GY ++ + GSL+ +YAK ++ A
Sbjct: 196 SPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLASAHC 255
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK- 453
L + D++S ++ A + +Y
Sbjct: 256 --------------------------------LYKSMPMKDMISCTALMTGYARDSNYSS 283
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
+ L+LFK ++ + D+ S+ + C+ + +L++G +H L K + + D + N L
Sbjct: 284 KALDLFKEIQQMHMKIDDVILCSMFNICANISSLSVGRQIHALALKCKP-TYDVAMGNAL 342
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
IDMY K G I + + FNEM ++NVI+WT+LI+ G +G A+ F++ME+ G KP+
Sbjct: 343 IDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPND 402
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
+ +++L AC H GL EG E F M Y + P +H+ C+VDL R G L+EA +I
Sbjct: 403 ITFLSLLFACNHCGLTGEGWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLIN 462
Query: 634 TMPFPPNALIWRTFLEGC 651
M PNA +W L C
Sbjct: 463 KMNIKPNASLWGAILGAC 480
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 250/496 (50%), Gaps = 30/496 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+R VVS+++ IS YS+ G +DAL +FL M+ GF+ QFT+G +L +C L ++ G
Sbjct: 58 MPERTVVSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRG 117
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+Q L+ F ++ V +ALL L+ + G +++ +F M + +V+WN+I+ +
Sbjct: 118 MQIQG-CLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAV 176
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
GF D +F +++ ++ +F V+ D+ QIH L+I+ G+ + +
Sbjct: 177 QGFSGDSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISL 236
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF-GKALELYLRMSVDI 237
+ SL++ Y +C + SA ++K + ++D++S ++ A N+ KAL+L+ +
Sbjct: 237 SGSLIDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMH 296
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ + + N CA + + +G+ IHA +K DV +G+AL+D YAK ++ A+
Sbjct: 297 MKIDDVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDAN 356
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F+E+ KN++SW +LI GY S L + ++ G +PN+ TF L+
Sbjct: 357 RAFNEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITF-------LSLL 409
Query: 357 LLQLHCLIIRMGYENYEYVLGS------------LMTSYAKSGLISDALAFVTALNI-PR 403
HC + G+E + ++ ++ +A+ GL+ +A + +NI P
Sbjct: 410 FACNHCGLTGEGWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPN 469
Query: 404 AVVPANIIAG--IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
A + I+ IY E L +++ + V++ ++ A G + ++ K
Sbjct: 470 ASLWGAILGACYIYGNMPLAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKL 529
Query: 462 M--RAARIYPDNYTFV 475
M R + P Y+F+
Sbjct: 530 MEERNLKKAP-GYSFI 544
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 147/508 (28%), Positives = 260/508 (51%), Gaps = 39/508 (7%)
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
L +DL+ +QIH +I +G + ++NSL+N Y C + A+++F ++VVSW
Sbjct: 31 LRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSW 90
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
+I LA+++ F +A++++ M + PN T V+ + A L + KS+H ++
Sbjct: 91 TILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVR 150
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFL 329
E +VFV +ALVD Y+K + A F +S +N+V+WNA++ GY+ S +I L
Sbjct: 151 GGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDL 210
Query: 330 LIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAK 385
+ + G + +T ++ +SL+ LQ +H IIR GYEN +++ +LM Y
Sbjct: 211 FNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVS 270
Query: 386 SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA 445
+ DA ++ S++ D+ +W +++
Sbjct: 271 HNCVDDAH--------------------------------RVFSEMSVKDVAAWTLMLTG 298
Query: 446 CAHNGDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
+ + ++ F M + + D+ + +LS+CS L G +H L KT +
Sbjct: 299 FSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKT-CFA 357
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
++ FV + +IDMY CG++ + + F M +++V+ W A+I+ G+NG+ A++ F +M
Sbjct: 358 NNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQM 417
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
+ G PD ++VL AC H G+V EG+++F M ++ V P + HY CV+D+L R G
Sbjct: 418 KGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQ 477
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L A I MPF P+ ++ T L C+
Sbjct: 478 LDAAYSFINNMPFQPDFDVYSTLLGACR 505
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 232/482 (48%), Gaps = 33/482 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPVEGAQ 60
P +NVVS+ +IS ++ +A+ +F MI F+P T +L +L + A+
Sbjct: 83 PYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAK 142
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
G F + FV TAL+ +Y + GC+ +FE M +++VTWN+IVS + HG
Sbjct: 143 SVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHG 202
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F E+ + LF + R + + + + +I + L+ G IHG +I+ G++ + +
Sbjct: 203 FSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKT 262
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVF 239
+L+++Y + A ++F ++ ++DV +W ++ + ++ +A++ + +M + +
Sbjct: 263 ALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLK 322
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
+ + +++SC+ G+ +HA IK ++FVGSA++D YA C NLE A
Sbjct: 323 LDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRF 382
Query: 300 FSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F + K++V WNA+I G T +I L +++ G P+E TF VL +
Sbjct: 383 FYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYA------- 435
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
C M YE + + TS+ IP A +I I R
Sbjct: 436 ---CSHAGMVYEGLQIFYHMVKTSHV----------------IPNLQHYACVI-DILGRA 475
Query: 419 GQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
GQ + ++ + +PD ++ ++ AC +G+ K E+ + + + P++ + L
Sbjct: 476 GQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQ--KIFEMEPNDAGYYVL 533
Query: 478 LS 479
LS
Sbjct: 534 LS 535
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 129/580 (22%), Positives = 251/580 (43%), Gaps = 86/580 (14%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L L P++ Q+ A ++ +GL + F+ +L+ Y G L + +F P K++
Sbjct: 31 LRKLKDLKPLQ--QIHAQIITSGL-THNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNV 87
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
V+W ++S K+ + + +F E++ + V+ +N + + +H
Sbjct: 88 VSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCF 147
Query: 167 VIKNGFDYELLVANSLVNMY--FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
++ GF+ + V +LV+MY F C G+ A ++F+ + R+VV+WN I+ ++
Sbjct: 148 WVRGGFEGNVFVETALVDMYSKFGCMGV--ARQLFESMSERNVVTWNAIVSGYSDHGFSE 205
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
+A++L+ M + + T + +I + + +G IH +I+ E D + +AL+
Sbjct: 206 EAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALM 265
Query: 285 DFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS------SPTSIFLLIELLQLGY 338
D Y + ++ AH FSE+S K++ +W ++ G++S + L I+ L+L
Sbjct: 266 DIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDS 325
Query: 339 RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
S S Q ++H L I+ + N +V +++ YA G + DA F
Sbjct: 326 IALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYG 385
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
+ D+V WN +IA NG + ++L
Sbjct: 386 MG--------------------------------EKDVVCWNAMIAGNGMNGYGTDAIDL 413
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL-HGLIKKTEIISS-DTFVCNMLIDM 516
F M+ + + PD TFVS+L ACS + G + + ++K + +I + + C +ID+
Sbjct: 414 FLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYAC--VIDI 471
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
G+ G + ++ N M F+PD
Sbjct: 472 LGRAGQLDAAYSFINNMP----------------------------------FQPDFDVY 497
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
+L ACR G ++ G E+ +++ + +EP Y+ ++
Sbjct: 498 STLLGACRIHGNIKLGHEISQKI---FEMEPNDAGYYVLL 534
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 136/256 (53%), Gaps = 4/256 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCD-SLNPVE-G 58
M +RNVV++N+I+S YS G+ E+A+ +F M +G +T L+ S+ ++ G
Sbjct: 183 MSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +++ G + D + TAL+ +Y H C+D+ VF +M K + W +++ F
Sbjct: 243 TGIHGFIIRTG-YENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSS 301
Query: 119 HGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + F +++ + L + +G++ S+ L+ G ++H L IK F +
Sbjct: 302 GRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIF 361
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V +++++MY C + A++ F + +DVV WN +I + A++L+L+M
Sbjct: 362 VGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSG 421
Query: 238 VFPNQTTFVYVINSCA 253
+ P+++TFV V+ +C+
Sbjct: 422 LDPDESTFVSVLYACS 437
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 152/564 (26%), Positives = 269/564 (47%), Gaps = 31/564 (5%)
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL-VRSEVALTESSFVGVIH 149
L + +F+ +P++ V+W +I+S + + + LF ++ ++SE+ + +
Sbjct: 65 LKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLK 124
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
+ +G +HG +K G + V ++L++MY + I + K+F ++ R+ V+
Sbjct: 125 TCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVT 184
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
W +I L + L + M V + + + + A G+SIH + +
Sbjct: 185 WTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTL 244
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFL 329
K + + FV ++L Y KC L+ F ++ ++VSW ++ Y
Sbjct: 245 KKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQ 304
Query: 330 LIELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
+ ++ PNE+TFS V+ F L + G + + +VL
Sbjct: 305 AFKRMRASNVIPNEYTFSAVISCCANFARL-------KWGEQLHAHVL------------ 345
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
+ FV AL++ AN I +Y++ G+ K+ ++ DI++W+ +IAA +
Sbjct: 346 ---CVGFVNALSV------ANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQ 396
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
G +E E MR+ P+ + S+LS C + L G LH + + +
Sbjct: 397 VGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGL-EQTSM 455
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
VC+ LI MY KCGSI + KIF + ++I+WTA+IS +G +Q A+E F ++ +G
Sbjct: 456 VCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVG 515
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
+PD V I VLTAC H G+V G F M++ Y + P +HY C++DLL R G L +A
Sbjct: 516 LRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDA 575
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
E +I +MP + ++W T L C+
Sbjct: 576 ETLIRSMPIQWDDVVWSTLLRACR 599
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 153/562 (27%), Positives = 259/562 (46%), Gaps = 44/562 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG---FEPTQFTFGGLLSCD-SLNPV 56
+P R+ VS+ +IIS Y +ALR+F M + +P + G L +C LN +
Sbjct: 75 LPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLG-LKTCGLGLNYL 133
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G L +K GL + FVG+ALL +Y + G + VF++MP ++ VTW ++++
Sbjct: 134 YGTNLHGFSVKTGLVNS-VFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGL 192
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ G+ E + F + RS+V ++ + ++ L G IH +K GFD
Sbjct: 193 VRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENS 252
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VANSL MY +C + F+ + DVVSW TI+ A + L+ + RM
Sbjct: 253 FVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRAS 312
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN+ TF VI+ CA G+ +HA V+ + V ++++ Y+KC L
Sbjct: 313 NVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASV 372
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLR--SSL 353
F + ++I++W+ +I Y+ F L + G +PNEF + VL S+
Sbjct: 373 SKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSM 432
Query: 354 AF--QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
A Q QLH ++ +G E V +L+ YAK G I++A
Sbjct: 433 AILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEA------------------- 473
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
K+ + DI+SW +I+ A +G +E +ELF+ ++ + PD+
Sbjct: 474 -------------SKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDS 520
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+ +L+ACS + LG + K I+ +ID+ + G + + +
Sbjct: 521 VTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIR 580
Query: 532 EMTDR-NVITWTALISALGLNG 552
M + + + W+ L+ A ++G
Sbjct: 581 SMPIQWDDVVWSTLLRACRIHG 602
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 217/481 (45%), Gaps = 39/481 (8%)
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+L AN+ + + + + A +F + RD VSW II S + +AL L+ +M
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 235 VDIVFPNQTTFVYV-INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ + + + +C N + G ++H +K L VFVGSAL+D Y K +
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEI 167
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFT-FSHVLRSS 352
+ F E+ +N V+W A+I G L++ GY FS + RS
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITG---------------LVRAGYSEAGLAYFSGMGRS- 211
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL---NIPRAVVPAN 409
++ Y++Y Y + + + A SG ++ + T AN
Sbjct: 212 -------------KVEYDSYAYAIA--LKASADSGALNHGRSIHTQTLKKGFDENSFVAN 256
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ +YN+ G+ + + ++ D+VSW ++ A G L+ FK MRA+ + P
Sbjct: 257 SLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIP 316
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ YTF +++S C+ L G LH + +++ + V N ++ +Y KCG + S K+
Sbjct: 317 NEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS-VANSIMTLYSKCGELASVSKV 375
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F M R++ITW+ +I+A G+ + A E M G KP+ AL +VL+ C ++
Sbjct: 376 FCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAIL 435
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
+G +L + S G+E ++ + + G + EA KI + + + W +
Sbjct: 436 EQGKQLHAHV-LSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMD-SWKDDIISWTAMIS 493
Query: 650 G 650
G
Sbjct: 494 G 494
>gi|302793458|ref|XP_002978494.1| hypothetical protein SELMODRAFT_108969 [Selaginella moellendorffii]
gi|300153843|gb|EFJ20480.1| hypothetical protein SELMODRAFT_108969 [Selaginella moellendorffii]
Length = 644
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 161/615 (26%), Positives = 282/615 (45%), Gaps = 53/615 (8%)
Query: 84 LYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES 142
+YG+ + E VF+ + RK++ +W+ I+S + ++G + + LF + +
Sbjct: 1 MYGKCRSVVEARQVFDALGWRKNVFSWSIIISAYAQNGHFREALQLFQAMDLEGMQPNSF 60
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW-SAEKMFKD 201
+ V+ S +D IH ++ GF + VA ++V M+ +C G W A+ +F
Sbjct: 61 TLSSVVAACSGLEDPLQARAIHSRIVGAGFGSDEFVATAMVAMFSRCDGCWIDAKAVFDG 120
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILG 261
+ R VVSWN +I +AL L RM + P+Q + ++++C+ ++
Sbjct: 121 MASRSVVSWNAVISGAIRGGEKDQALRLLWRMDNEGTKPDQFSLTTILSACSSVREC--- 177
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
+ HA++ + + + V ++L+D Y KC +L A + F E+ ++++SW LI Y
Sbjct: 178 REFHARIQASGFQAMLAVQNSLMDCYGKCGSLRDAKMVFDEMVERDVISWTCLIASYVHN 237
Query: 322 SSPTSIFLLIELLQLGYR-------PNEFTFSHVLRS-SLAFQLLQLHCLIIRMGYENYE 373
+ EL++ R PN TF+ V + S+ L Q L R+ +
Sbjct: 238 DESREAIAIYELMEESARRSLSSLQPNVCTFTAVAEACSIVGALEQGRALYSRINVAAWN 297
Query: 374 YVLG--------------SLMTSYAKSGLISDALAFVTALNI------------------ 401
+V+ L A G +D + F AL +
Sbjct: 298 FVIASIAQADSSAAADVLELFGEMALEGTKADGVTFAAALGVCTNHVDRGKSLHSFARDA 357
Query: 402 ---PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
V A +IA +Y+R+G+ +E ++ +V+W+ ++ A G L+L
Sbjct: 358 GLDRENAVGAALIA-MYSRSGRLDEAWTAFEKIREKSVVAWSSLMTGYAQQGKNWRALQL 416
Query: 459 FKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
++ M + + PD +TF ++L C++L G +H + D + LIDM+
Sbjct: 417 YEEMILESEVLPDKFTFSTILGVCAELGAAEEGRRVHSQMLACLGFERDAVLGTSLIDMF 476
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
KCG+I ++ +F+ M +RNV TWT L++ L +G ++A+ R M GF D+ +
Sbjct: 477 AKCGNIDAAKLVFDGMLERNVQTWTTLVAGLARHGRGEQAVWWLRRMSMEGFCADQATVT 536
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
+L C HGGL+ G F YG++ +HY CVVDLL R G LK+AE + M
Sbjct: 537 TILHGCNHGGLIDAGRCCFRLAGGEYGIQASCEHYDCVVDLLGRAGRLKDAESLAAAM-- 594
Query: 638 PPNALIWRTFLEGCQ 652
+ WR L C+
Sbjct: 595 -DDQAPWRILLGACR 608
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 131/583 (22%), Positives = 245/583 (42%), Gaps = 98/583 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M R+VVS+N++IS R G + ALR+ M N G +P QF+ +LS C S+ E
Sbjct: 121 MASRSVVSWNAVISGAIRGGEKDQALRLLWRMDNEGTKPDQFSLTTILSACSSVR--ECR 178
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ A + +G F A V +L+ YG+ G L + VF++M + +++W +++ + +
Sbjct: 179 EFHARIQASG-FQAMLAVQNSLMDCYGKCGSLRDAKMVFDEMVERDVISWTCLIASYVHN 237
Query: 120 GFVEDCMFLFCELVRSEVALTESS-------FVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+ + ++ EL+ + SS F V S LE G ++ +
Sbjct: 238 DESREAIAIY-ELMEESARRSLSSLQPNVCTFTAVAEACSIVGALEQGRALYSRI----- 291
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA--LELY 230
+V +WN +I ++A++++ A LEL+
Sbjct: 292 ---------------------------------NVAAWNFVIASIAQADSSAAADVLELF 318
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
M+++ + TF + C + GKS+H+ L+ + VG+AL+ Y++
Sbjct: 319 GEMALEGTKADGVTFAAALGVCTNHVDR--GKSLHSFARDAGLDRENAVGAALIAMYSRS 376
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE--LLQLGYRPNEFTFSHV 348
L+ A F +I K++V+W++L+ GYA + L E +L+ P++FTFS +
Sbjct: 377 GRLDEAWTAFEKIREKSVVAWSSLMTGYAQQGKNWRALQLYEEMILESEVLPDKFTFSTI 436
Query: 349 L----RSSLAFQLLQLHCLIIR-MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
L A + ++H ++ +G+E + SL+ +AK G I DA V
Sbjct: 437 LGVCAELGAAEEGRRVHSQMLACLGFERDAVLGTSLIDMFAKCGNI-DAAKLV------- 488
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
LER ++ +W ++A A +G ++ + + M
Sbjct: 489 -----------------------FDGMLER-NVQTWTTLVAGLARHGRGEQAVWWLRRMS 524
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
D T ++L C+ + G L I + + ++D+ G+ G +
Sbjct: 525 MEGFCADQATVTTILHGCNHGGLIDAGRCCFRLAGGEYGIQASCEHYDCVVDLLGRAGRL 584
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLN---GFAQRALEKFRE 563
+ + M D+ W L+ A ++ A+RA + E
Sbjct: 585 KDAESLAAAMDDQ--APWRILLGACRIHADLAVAKRAAPRVVE 625
>gi|302790562|ref|XP_002977048.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
gi|300155024|gb|EFJ21657.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
Length = 883
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 184/662 (27%), Positives = 330/662 (49%), Gaps = 49/662 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+ +++V+ +NS+I+AY++ G+ A ++ M G + + TF G+L +C SL EG
Sbjct: 207 IENKDVICWNSMIAAYAQGGHSAQARQLCEEMEGFGVKASDTTFAGILGACSSLE--EGK 264
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ + L GL + V AL+ +YG+ LD VF + +V+W +++ + +H
Sbjct: 265 KIHSRALARGL-SSSIIVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQH 323
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHG--LVIKNGFDYELL 177
G + + L+ ++ + + +F V+ SN DLE G+ +H L K+GF +L
Sbjct: 324 GRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTNDLELGQALHARLLARKDGFSDGVL 383
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKA-LELYLRMSV 235
VA +L+NMY +C + + ++F+ + + VV WN +I A E E + +A ++LY M
Sbjct: 384 VA-ALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAY-EQEGYSRAAVDLYDMMKQ 441
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC--DVFVGSALVDFYAKCDNL 293
+ P+++T ++++CA L++ G+ +H ++I + +C + V +AL+ YA C +
Sbjct: 442 RGLDPDESTLSSILSACAELKDLEKGEQVHVEIIASR-DCSQNPVVLNALISMYASCGEI 500
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSS 352
A F + N+++VSW LI Y L +L G +P E T V+ +
Sbjct: 501 REAKAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEVTMLAVIAAC 560
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
A + L +E ++ +T D++ F V A +I+
Sbjct: 561 SAMESL-------------WEGIVIHALT---------DSMFFTDT------AVQAALIS 592
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVS--WNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+Y R + + ++ Q+ + + WN ++AA + G +E + L+ M + I +
Sbjct: 593 -MYARCRRLDLACQVFRQVRHLESSANCWNAMLAAYSQLGLPEEGIRLYWEMSSTGIKAN 651
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF L+ACS L + G +H + + S + L+ MY KC + ++ +F
Sbjct: 652 EGTFAGALAACSMLGAVREGYRIHEQVSSSRYSSDLSLK-TALVHMYAKCNRVDAAFHVF 710
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
++ +V+ W A+I+A NG+A ALE + +M G+KP + V AC H GLV
Sbjct: 711 EQLQP-DVVAWNAMIAAYAQNGYAWHALELYSKM-LHGYKPLEPTFLCVFLACGHAGLVD 768
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
E F+ M + P DHY CVV +L R G L+EAE ++ +MPF P ++ W + L
Sbjct: 769 ECKWYFQSMIEDR-ITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPFNPGSVGWTSLLGA 827
Query: 651 CQ 652
C+
Sbjct: 828 CR 829
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/529 (29%), Positives = 268/529 (50%), Gaps = 33/529 (6%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G ++ A ++ +GL +D F+G LL +YG+ G +D+ + VF +PR+SL +WN I++ F
Sbjct: 63 QGRRIHAHIVASGL-ASDGFLGDHLLQMYGKCGSVDDAIQVFHALPRRSLFSWNFIIAAF 121
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
K+ + +F + + + ++ V+ S+ +DLE G +IHG + F +
Sbjct: 122 AKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGRRIHGRISSGEFQSGI 181
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+V LV MY +C + A ++F +E +DV+ WN++I A A+ + +A +L M
Sbjct: 182 VVETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQGGHSAQARQLCEEMEGF 241
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V + TTF ++ +C+ L+ GK IH++ + L + V +AL+ Y KC+ L+ A
Sbjct: 242 GVKASDTTFAGILGACSSLEE---GKKIHSRALARGLSSSIIVQNALISMYGKCNELDAA 298
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAF 355
FS++ ++VSW ALI+ Y L + ++ G P++ TF+ VL +
Sbjct: 299 RRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNT 358
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L+L G + +L A+ SD + +N +Y
Sbjct: 359 NDLEL-------GQALHARLL-------ARKDGFSDGVLVAALIN-------------MY 391
Query: 416 NRTGQYNETVKLL-SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+ G+ + + ++ S + +V WN +I A G + ++L+ M+ + PD T
Sbjct: 392 VKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTL 451
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S+LSAC++L +L G +H I + S + V N LI MY CG I + +F M
Sbjct: 452 SSILSACAELKDLEKGEQVHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMK 511
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+R+V++WT LISA G A+RAL +R M G +P V ++AV+ AC
Sbjct: 512 NRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEVTMLAVIAAC 560
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 168/612 (27%), Positives = 301/612 (49%), Gaps = 52/612 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+P R++ S+N II+A+++ + A+ MF M + G +P T +L +C SL +E
Sbjct: 106 LPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEG 165
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + +G F + V T L+ +Y R G L E VF+ + K ++ WNS+++ + +
Sbjct: 166 RRIHGRISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQG 225
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G L E+ V ++++F G++ S+ LE G++IH + G ++V
Sbjct: 226 GHSAQARQLCEEMEGFGVKASDTTFAGILGACSS---LEEGKKIHSRALARGLSSSIIVQ 282
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L++MY +C + +A ++F V DVVSW +I A + +ALELY +M + +
Sbjct: 283 NALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGME 342
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVI--KNALECDVFVGSALVDFYAKCDNLEGAH 297
P++ TF V+++C+ + LG+++HA+++ K+ V V +AL++ Y KC L+ +
Sbjct: 343 PDKVTFTSVLSACSNTNDLELGQALHARLLARKDGFSDGVLV-AALINMYVKCGRLDLSS 401
Query: 298 LCFSEISN-KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F + K +V WNA+I Y + S ++ L + Q G P+E T S +L +
Sbjct: 402 EIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAEL 461
Query: 356 QLL----QLHCLII--RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ L Q+H II R +N VL +L++ YA G I +A A
Sbjct: 462 KDLEKGEQVHVEIIASRDCSQN-PVVLNALISMYASCGEIREAKA--------------- 505
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ +++ D+VSW I+I+A GD + L L++ M + P
Sbjct: 506 -----------------VFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQP 548
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
T +++++ACS + +L G +H L + +DT V LI MY +C + + ++
Sbjct: 549 TEVTMLAVIAACSAMESLWEGIVIHALTDS--MFFTDTAVQAALISMYARCRRLDLACQV 606
Query: 530 FNEMT--DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
F ++ + + W A+++A G + + + EM G K + L AC G
Sbjct: 607 FRQVRHLESSANCWNAMLAAYSQLGLPEEGIRLYWEMSSTGIKANEGTFAGALAACSMLG 666
Query: 588 LVREGMELFERM 599
VREG + E++
Sbjct: 667 AVREGYRIHEQV 678
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 234/495 (47%), Gaps = 33/495 (6%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
++ ++ N L G +IH ++ +G + + + L+ MY +C + A ++F +
Sbjct: 47 TYAALLKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHAL 106
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
R + SWN II A A++ + KA+E++ M + P+ T V+ +C+ L++ G+
Sbjct: 107 PRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGR 166
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
IH ++ + + V + LV YA+C L A F I NK+++ WN++I YA
Sbjct: 167 RIHGRISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQGG 226
Query: 323 SPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMT 381
L E ++ G + ++ TF+ +L + C + G + + L ++
Sbjct: 227 HSAQARQLCEEMEGFGVKASDTTFAGILGA----------CSSLEEGKKIHSRALARGLS 276
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
S +++ N + +Y + + + ++ S++ D+VSW
Sbjct: 277 S---------------------SIIVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTA 315
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I A +G +E LEL+K M + PD TF S+LSACS +L LG +LH + +
Sbjct: 316 LIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTNDLELGQALHARLLARK 375
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEK 560
SD + LI+MY KCG + S +IF D + V+ W A+I+A G+++ A++
Sbjct: 376 DGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDL 435
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
+ M+ G PD L ++L+AC + +G ++ + S + ++ +
Sbjct: 436 YDMMKQRGLDPDESTLSSILSACAELKDLEKGEQVHVEIIASRDCSQNPVVLNALISMYA 495
Query: 621 RYGHLKEAEKIITTM 635
G ++EA+ + M
Sbjct: 496 SCGEIREAKAVFKRM 510
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 158/585 (27%), Positives = 275/585 (47%), Gaps = 57/585 (9%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQ 62
+VVS+ ++I AY++ G +AL ++ M G EP + TF +LS C + N +E G L
Sbjct: 309 DVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTNDLELGQALH 368
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFED-MPRKSLVTWNSIVSIFGKHGF 121
A +L +D + AL+ +Y + G LD +F+ K++V WN++++ + + G+
Sbjct: 369 ARLLARKDGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGY 428
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIH-GLVIKNGFDYELLVAN 180
+ L+ + + + ES+ ++ + +DLE GEQ+H ++ +V N
Sbjct: 429 SRAAVDLYDMMKQRGLDPDESTLSSILSACAELKDLEKGEQVHVEIIASRDCSQNPVVLN 488
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L++MY C I A+ +FK ++ RDVVSW +I A + + +AL LY RM V+ V P
Sbjct: 489 ALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQP 548
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T + VI +C+ +++ G IHA + + D V +AL+ YA+C L+ A F
Sbjct: 549 TEVTMLAVIAACSAMESLWEGIVIHA-LTDSMFFTDTAVQAALISMYARCRRLDLACQVF 607
Query: 301 SEISN--KNIVSWNALILGYASKSSPTS-IFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
++ + + WNA++ Y+ P I L E+ G + NE TF+ L A +
Sbjct: 608 RQVRHLESSANCWNAMLAAYSQLGLPEEGIRLYWEMSSTGIKANEGTFAGAL---AACSM 664
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYA--KSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L +R GY +E V S +S K+ L+ +Y
Sbjct: 665 LG----AVREGYRIHEQVSSSRYSSDLSLKTALVH-----------------------MY 697
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ + + + QL+ PD+V+WN +IAA A NG LEL+ M P TF+
Sbjct: 698 AKCNRVDAAFHVFEQLQ-PDVVAWNAMIAAYAQNGYAWHALELYSKMLHG-YKPLEPTFL 755
Query: 476 SLLSACSKL-----CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ AC C S + I T D + C ++ + + G + + +
Sbjct: 756 CVFLACGHAGLVDECKWYFQSMIEDRITPT----FDHYSC--VVTVLSRAGKLEEAEDLL 809
Query: 531 NEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFKP 571
+ M + + WT+L+ A +G A+RA ++ E++ P
Sbjct: 810 HSMPFNPGSVGWTSLLGACRTHGDLKRARRAADEAMELDRQDSAP 854
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 199/432 (46%), Gaps = 40/432 (9%)
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
F + T+ ++ C G+ IHA ++ + L D F+G L+ Y KC +++ A
Sbjct: 42 FQVRQTYAALLKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQ 101
Query: 299 CFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + +++ SWN +I +A ++ +I + + G +P+ T S VL + + +
Sbjct: 102 VFHALPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRD 161
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
L E + G + + +SG+ VV ++ +Y R
Sbjct: 162 L-----------EEGRRIHGRISSGEFQSGI----------------VVETGLVK-MYAR 193
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G+ E ++ ++E D++ WN +IAA A G + +L + M + + TF +
Sbjct: 194 CGRLREAREVFDRIENKDVICWNSMIAAYAQGGHSAQARQLCEEMEGFGVKASDTTFAGI 253
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L ACS +L G +H +SS V N LI MYGKC + ++ ++F+++ +
Sbjct: 254 LGACS---SLEEGKKIHSR-ALARGLSSSIIVQNALISMYGKCNELDAARRVFSKVRAHD 309
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
V++WTALI A +G + ALE +++ME G +PD+V +VL+AC + + G L
Sbjct: 310 VVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTNDLELGQALHA 369
Query: 598 R-MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL-----EGC 651
R + R G + ++++ V+ G L + +I + ++W + EG
Sbjct: 370 RLLARKDGFSDGV-LVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGY 428
Query: 652 QRCRIAKYDTLN 663
R + YD +
Sbjct: 429 SRAAVDLYDMMK 440
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 152/564 (26%), Positives = 269/564 (47%), Gaps = 31/564 (5%)
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL-VRSEVALTESSFVGVIH 149
L + +F+ +P++ V+W +I+S + + + LF ++ ++SE+ + +
Sbjct: 65 LKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLK 124
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
+ +G +HG +K G + V ++L++MY + I + K+F ++ R+ V+
Sbjct: 125 TCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVT 184
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
W +I L + L + M V + + + + A G+SIH + +
Sbjct: 185 WTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTL 244
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFL 329
K + + FV ++L Y KC L+ F ++ ++VSW ++ Y
Sbjct: 245 KKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQ 304
Query: 330 LIELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
+ ++ PNE+TFS V+ F L + G + + +VL
Sbjct: 305 AFKRMRASNVIPNEYTFSAVISCCANFARL-------KWGEQLHAHVL------------ 345
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
+ FV AL++ AN I +Y++ G+ K+ ++ DI++W+ +IAA +
Sbjct: 346 ---CVGFVNALSV------ANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQ 396
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
G +E E MR+ P+ + S+LS C + L G LH + + +
Sbjct: 397 VGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGL-EQTSM 455
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
VC+ LI MY KCGSI + KIF + ++I+WTA+IS +G +Q A+E F ++ +G
Sbjct: 456 VCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVG 515
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
+PD V I VLTAC H G+V G F M++ Y + P +HY C++DLL R G L +A
Sbjct: 516 LRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDA 575
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
E +I +MP + ++W T L C+
Sbjct: 576 ETLIRSMPIQWDDVVWSTLLRACR 599
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 153/562 (27%), Positives = 259/562 (46%), Gaps = 44/562 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG---FEPTQFTFGGLLSCD-SLNPV 56
+P R+ VS+ +IIS Y +ALR+F M + +P + G L +C LN +
Sbjct: 75 LPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLG-LKTCGLGLNYL 133
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G L +K GL + FVG+ALL +Y + G + VF++MP ++ VTW ++++
Sbjct: 134 YGTNLHGFSVKXGLVNS-VFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGL 192
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ G+ E + F + RS+V ++ + ++ L G IH +K GFD
Sbjct: 193 VRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENS 252
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VANSL MY +C + F+ + DVVSW TI+ A + L+ + RM
Sbjct: 253 FVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRAS 312
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN+ TF VI+ CA G+ +HA V+ + V ++++ Y+KC L
Sbjct: 313 NVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASV 372
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLR--SSL 353
F + ++I++W+ +I Y+ F L + G +PNEF + VL S+
Sbjct: 373 SKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSM 432
Query: 354 AF--QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
A Q QLH ++ +G E V +L+ YAK G I++A
Sbjct: 433 AILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEA------------------- 473
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
K+ + DI+SW +I+ A +G +E +ELF+ ++ + PD+
Sbjct: 474 -------------SKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDS 520
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+ +L+ACS + LG + K I+ +ID+ + G + + +
Sbjct: 521 VTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIR 580
Query: 532 EMTDR-NVITWTALISALGLNG 552
M + + + W+ L+ A ++G
Sbjct: 581 SMPIQWDDVVWSTLLRACRIHG 602
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 217/481 (45%), Gaps = 39/481 (8%)
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+L AN+ + + + + A +F + RD VSW II S + +AL L+ +M
Sbjct: 48 DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107
Query: 235 VDIVFPNQTTFVYV-INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ + + + +C N + G ++H +K L VFVGSAL+D Y K +
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEI 167
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFT-FSHVLRSS 352
+ F E+ +N V+W A+I G L++ GY FS + RS
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITG---------------LVRAGYSEAGLAYFSGMGRS- 211
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL---NIPRAVVPAN 409
++ Y++Y Y + + + A SG ++ + T AN
Sbjct: 212 -------------KVEYDSYAYAIA--LKASADSGALNHGRSIHTQTLKKGFDENSFVAN 256
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ +YN+ G+ + + ++ D+VSW ++ A G L+ FK MRA+ + P
Sbjct: 257 SLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIP 316
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ YTF +++S C+ L G LH + +++ + V N ++ +Y KCG + S K+
Sbjct: 317 NEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS-VANSIMTLYSKCGELASVSKV 375
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F M R++ITW+ +I+A G+ + A E M G KP+ AL +VL+ C ++
Sbjct: 376 FCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAIL 435
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
+G +L + S G+E ++ + + G + EA KI + + + W +
Sbjct: 436 EQGKQLHAHV-LSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMD-SWKDDIISWTAMIS 493
Query: 650 G 650
G
Sbjct: 494 G 494
>gi|116310930|emb|CAH67868.1| B0403H10-OSIGBa0105A11.20 [Oryza sativa Indica Group]
Length = 804
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 183/666 (27%), Positives = 326/666 (48%), Gaps = 58/666 (8%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQ---FTFGGLLSC--DSLNPVEGAQLQAS 64
N+++ AY+ E+ALR+ + + P + +T+ L+ S G + A
Sbjct: 71 NALLIAYADRALQEEALRLNALLNHAARPPVRSDHYTYSAALTACARSRRLRLGRSVHAH 130
Query: 65 VLKNGLFCAD-AFVGTALLGLYG-----RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+L+ D A + +LL LY R +D V +F+ MP++++V+WN++ + K
Sbjct: 131 MLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVK 190
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY--EL 176
G ++ + LF ++ T SFV + + D + Q++GL++K G +Y +L
Sbjct: 191 TGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVAD-DPSWPFQLYGLLVKYGVEYINDL 249
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V +S ++M+ + + SA ++F ++ WNT+I ++ F +A++L+ ++
Sbjct: 250 FVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGS 309
Query: 237 IVFP-NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC-DVFVGSALVDFYAKCDNLE 294
P + TF+ + + + Q+ LG+ +H +IK V +G+ALV Y++C N++
Sbjct: 310 REVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQ 369
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSL 353
A F + K+IV+WN ++ + LL+ E+ + G+ + T + VL +S
Sbjct: 370 TAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASS 429
Query: 354 AFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL-AFVTALNIPRAVVPA 408
LQ+ H +IR G E E + L+ YAKSG + A F + N R
Sbjct: 430 NTGDLQIGKQAHGYLIRHGIEG-EGLESYLIDMYAKSGRVEMAQRVFDSFKNAKR----- 483
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
D V+WN +IA +G ++ + +F+ M A +
Sbjct: 484 --------------------------DEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLE 517
Query: 469 PDNYTFVSLLSACSKLCN-LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P + T S+L AC + + G +H + + ++ FV LIDMY KCG I ++
Sbjct: 518 PTSVTLASVLPACDPVGGGVYSGKQIHCFAVR-RCLDTNVFVGTALIDMYSKCGEITTAE 576
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+F MT ++ +T+T +IS LG +GF ++AL F M+ G KPD V ++ ++AC + G
Sbjct: 577 NVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSG 636
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN-ALIWRT 646
LV EG+ L+ M+ S+G+ H+ CV DLL + G ++EA + I + N IW +
Sbjct: 637 LVDEGLALYRSMD-SFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGS 695
Query: 647 FLEGCQ 652
L C+
Sbjct: 696 LLASCK 701
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 145/583 (24%), Positives = 276/583 (47%), Gaps = 53/583 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCD-SLNPVEGA 59
MP RNVVS+N++ Y + G ++AL +F+ M+ GF PT +F + + +P
Sbjct: 173 MPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVADDPSWPF 232
Query: 60 QLQASVLKNGL-FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL ++K G+ + D FV ++ + ++ G + VF+ +K+ WN++++ + +
Sbjct: 233 QLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQ 292
Query: 119 HGFVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL- 176
+G + + LF +++ S EV L +F+ + S QD+ G+Q+HG +IK G L
Sbjct: 293 NGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIK-GMHRTLP 351
Query: 177 -LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
++ N+LV MY +C + +A +F + +D+V+WNT++ A +++ + L L M
Sbjct: 352 VILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQK 411
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ T V+++ + + +GK H +I++ +E + + S L+D YAK +E
Sbjct: 412 SGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGE-GLESYLIDMYAKSGRVEM 470
Query: 296 AHLCFSEISN--KNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRS- 351
A F N ++ V+WNA+I GY P +I + +L+ G P T + VL +
Sbjct: 471 AQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPAC 530
Query: 352 ----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ Q+HC +R + +V +L+ Y+K G I+ A
Sbjct: 531 DPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTA--------------- 575
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
N+ G+ ++ V++ +I+ +G K+ L LF M+ +
Sbjct: 576 ENVFGGMTGKS-----------------TVTYTTMISGLGQHGFGKKALALFNSMQEKGL 618
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD TF+S +SAC+ + G +L+ + I ++ C + D+ K G + +
Sbjct: 619 KPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHC-CVADLLAKAGRVEEAY 677
Query: 528 KIFNEMTDRN--VITWTALIS---ALGLNGFAQRALEKFREME 565
+ + + V W +L++ A G A+ +K ++E
Sbjct: 678 EFIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLDIE 720
>gi|302783573|ref|XP_002973559.1| hypothetical protein SELMODRAFT_99957 [Selaginella moellendorffii]
gi|300158597|gb|EFJ25219.1| hypothetical protein SELMODRAFT_99957 [Selaginella moellendorffii]
Length = 573
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 150/503 (29%), Positives = 259/503 (51%), Gaps = 42/503 (8%)
Query: 157 LEFGEQIHGLVIKNGF-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
L G +IH + + GF D L + N+L+N+Y +C + A ++ + +E+R+ VSWN +IG
Sbjct: 72 LHEGRRIHSHIARCGFGDRALFLQNTLLNVYAKCGSVRDAIELLESMELRNAVSWNVVIG 131
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL-- 273
A S + +ALE++ +M ++ V P + TF + +C G + LG+ IH+ + + +
Sbjct: 132 GFARSGHRQEALEIFGKMMLEGVRPGRITFTNALLACEGEEFLPLGRIIHSSIQEAGITD 191
Query: 274 ----ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFL 329
E V +G+ L+ Y +C +L A + + + IVSWN++I YA F
Sbjct: 192 QEEEEKAVELGNGLIAMYGRCGDLAAATQVYYGVRQRTIVSWNSIIAAYAQSGHSKEAFQ 251
Query: 330 LI-ELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
ELL G +P+ TF +L + + Q + + +IR ++GL
Sbjct: 252 FFQELLANGTKPSSVTFLAILPACSSSQEVDVFSALIR------------------EAGL 293
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACA 447
SD V+ + + Y + G + + ++LE D+++W + +C+
Sbjct: 294 ESD-------------VLVSTCLITTYGKAGSLENSRRAFAELELSDDVLAWTSAMTSCS 340
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
G ++ L +F+ M+ I+P ++T L +C+KL + GSS+H ++ SD
Sbjct: 341 QKGLDRDSLAIFRQMQLQGIHPTSFTLAVALESCAKLGDYEQGSSIHRVMALQ--CKSDE 398
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
FV L+++Y +CG + ++ +F+ ++ TALI+ NG AL+ ++ M+
Sbjct: 399 FVATALVNLYSRCGDLAAARAVFDGFQGSTLVLATALIAGYSRNGDGTAALQAYQLMQLH 458
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G P+ V + +L+AC H GL+ EG+ F+ M + +E HY CVVDLL R GHL+E
Sbjct: 459 GDAPNDVTFVTILSACSHAGLLDEGVGYFQAMAAEHSIEATAQHYGCVVDLLARLGHLEE 518
Query: 628 AEKIITTMPFPPNALIWRTFLEG 650
AE+II MPF P ++ W T L G
Sbjct: 519 AEEIIEEMPFLPGSVDWLTLLGG 541
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 186/359 (51%), Gaps = 15/359 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLN--PVE 57
M RN VS+N +I ++R G+ ++AL +F M+ G P + TF LL+C+ P+
Sbjct: 118 MELRNAVSWNVVIGGFARSGHRQEALEIFGKMMLEGVRPGRITFTNALLACEGEEFLPL- 176
Query: 58 GAQLQASVLKNGLFCAD-----AFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
G + +S+ + G+ + +G L+ +YGR G L V+ + ++++V+WNSI
Sbjct: 177 GRIIHSSIQEAGITDQEEEEKAVELGNGLIAMYGRCGDLAAATQVYYGVRQRTIVSWNSI 236
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
++ + + G ++ F EL+ + + +F+ ++ S+ Q+++ L+ + G
Sbjct: 237 IAAYAQSGHSKEAFQFFQELLANGTKPSSVTFLAILPACSSSQEVDV---FSALIREAGL 293
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYL 231
+ ++LV+ L+ Y + + ++ + F ++E+ DV++W + + + ++ +L ++
Sbjct: 294 ESDVLVSTCLITTYGKAGSLENSRRAFAELELSDDVLAWTSAMTSCSQKGLDRDSLAIFR 353
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
+M + + P T + SCA L + G SIH +V+ + D FV +ALV+ Y++C
Sbjct: 354 QMQLQGIHPTSFTLAVALESCAKLGDYEQGSSIH-RVMALQCKSDEFVATALVNLYSRCG 412
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVL 349
+L A F +V ALI GY+ T+ +L+QL G PN+ TF +L
Sbjct: 413 DLAAARAVFDGFQGSTLVLATALIAGYSRNGDGTAALQAYQLMQLHGDAPNDVTFVTIL 471
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 128/256 (50%), Gaps = 9/256 (3%)
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
RA+ N + +Y + G + ++LL +E + VSWN+VI A +G +E LE+F M
Sbjct: 90 RALFLQNTLLNVYAKCGSVRDAIELLESMELRNAVSWNVVIGGFARSGHRQEALEIFGKM 149
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD-----TFVCNMLIDMY 517
+ P TF + L AC L LG +H I++ I + + N LI MY
Sbjct: 150 MLEGVRPGRITFTNALLACEGEEFLPLGRIIHSSIQEAGITDQEEEEKAVELGNGLIAMY 209
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
G+CG + ++ +++ + R +++W ++I+A +G ++ A + F+E+ G KP V +
Sbjct: 210 GRCGDLAAATQVYYGVRQRTIVSWNSIIAAYAQSGHSKEAFQFFQELLANGTKPSSVTFL 269
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
A+L AC + +++F + R G+E ++ C++ + G L+ + + +
Sbjct: 270 AILPACSSS----QEVDVFSALIREAGLESDVLVSTCLITTYGKAGSLENSRRAFAELEL 325
Query: 638 PPNALIWRTFLEGCQR 653
+ L W + + C +
Sbjct: 326 SDDVLAWTSAMTSCSQ 341
>gi|115436506|ref|NP_001043011.1| Os01g0357800 [Oryza sativa Japonica Group]
gi|53791613|dbj|BAD52960.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|53792343|dbj|BAD53077.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532542|dbj|BAF04925.1| Os01g0357800 [Oryza sativa Japonica Group]
Length = 804
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 182/653 (27%), Positives = 314/653 (48%), Gaps = 42/653 (6%)
Query: 9 FNSIISAYSRCGYVEDALRMF--LYMINRGFEPTQFTFGGLLSCDSL-NPVEGAQLQASV 65
+NS + Y R GY E+ + ++ L + GF TF + SC L N G + A
Sbjct: 114 WNSAMVDYFRAGYPEEVIILYKRLKLNQIGFNGKTITFV-MKSCTELKNLYLGKGVHADS 172
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK--HGFVE 123
LK L + FVG++L+GLY + ++ VFE++ K +V + S+++ + +
Sbjct: 173 LKLAL-SGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAW 231
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY-ELLVANSL 182
+ + +++++ + + + V ++ N L+ G+ +H I+ + ++ S+
Sbjct: 232 NAFEIATDMLQNNLEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSI 291
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES-ENFGKALELYLRMSVDIVFPN 241
VN Y +C SA + ++ + V SWN ++ L + ++F L + + V P+
Sbjct: 292 VNFYTRCGAYQSAATVLQNSK-GTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPD 350
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TF V+++CA L SIHA I+ + DV + +AL++ Y KC + + F
Sbjct: 351 SVTFANVLSACAELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYLFD 410
Query: 302 EISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
++ K++VS+NA+I GY + + LL ++ G P+ F+ VL AF
Sbjct: 411 QLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPD---FATVLSLLAAFA---- 463
Query: 361 HCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+ + V G + +A + G SD V N I +Y+ G
Sbjct: 464 ---------DQRDLVRGRWIHGFAIRHGFCSD-------------VDVENQILYMYSACG 501
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+ + LE+ ++VSW ++ C NG EV++LF+ M+ PD+ + V+ +
Sbjct: 502 KIAAARAIFDSLEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQ 561
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
A S L +L +H + ++ ++ D N LI Y KCG + S +F + RN+
Sbjct: 562 AVSDLGHLNGLKQIHCFVYRS-LLEKDKITANSLISAYAKCGKLDLSAGLFFSLKYRNLD 620
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
TW A+ISA ++GF LE F++ME +PD + VLTAC H GLV++G +F M
Sbjct: 621 TWNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTACSHAGLVKDGWRIFNSM 680
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y V P+ +HY C+VDLL R GHL++ K I + I+ L C+
Sbjct: 681 TSVYSVLPQEEHYGCMVDLLGRAGHLEDGYKFIKLSTLKDKSTIFCALLSACR 733
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/532 (24%), Positives = 238/532 (44%), Gaps = 44/532 (8%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ A+V +GL C D +G+ +L Y G L E VF+ + + WNS + + +
Sbjct: 66 KIHANVFTHGL-CWDVILGSKILSCYANLGALHESRLVFQKIVNDDISLWNSAMVDYFRA 124
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G+ E+ + L+ L +++ + V+ + ++L G+ +H +K V
Sbjct: 125 GYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFVG 184
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN--FGKALELYLRMSVDI 237
+SL+ +Y + + + +F+++ +D+V++ ++I +E+ + A E+ M +
Sbjct: 185 SSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQNN 244
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE-CDVFVGSALVDFYAKCDNLEGA 296
+ N+ T V ++ L GKS+H I+ A+ D + +++V+FY +C + A
Sbjct: 245 LEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSA 304
Query: 297 HLCFSEISNKNIVSWNALILGY--ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
S + SWNAL+ G A +S +L + L + P+ TF++VL +
Sbjct: 305 ATVLQN-SKGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAE 363
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+H IR IP VV
Sbjct: 364 LCYFCFAASIHAYFIRRF--------------------------------IPMDVVLTTA 391
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ +Y + + + L QL D+VS+N +I N E L YM A + PD
Sbjct: 392 LIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPD 451
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
T +SLL+A + +L G +HG + SD V N ++ MY CG I ++ IF
Sbjct: 452 FATVLSLLAAFADQRDLVRGRWIHGFAIR-HGFCSDVDVENQILYMYSACGKIAAARAIF 510
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ + +N+++WTA++ NG A ++ F+ M+ G KPD V+L+ + A
Sbjct: 511 DSLEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQA 562
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 173/350 (49%), Gaps = 5/350 (1%)
Query: 6 VVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLLS-CDSLNPV-EGAQLQ 62
V S+N+++S +R G +A++ M++ P TF +LS C L A +
Sbjct: 315 VASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIH 374
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
A ++ D + TAL+ +Y + + +F+ + K +V++N+++ + ++
Sbjct: 375 AYFIRR-FIPMDVVLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMA 433
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ L ++ VA ++ + ++ ++++DL G IHG I++GF ++ V N +
Sbjct: 434 NEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQI 493
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
+ MY C I +A +F +E +++VSW ++ + + + ++L+ M P+
Sbjct: 494 LYMYSACGKIAAARAIFDSLEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDS 553
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
+ V + + + L + K IH V ++ LE D ++L+ YAKC L+ + F
Sbjct: 554 VSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGKLDLSAGLFFS 613
Query: 303 ISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRS 351
+ +N+ +WNA+I YA ++ + ++ + +P+E TFS VL +
Sbjct: 614 LKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTA 663
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 130/256 (50%), Gaps = 5/256 (1%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQL 61
++VVS+N++I Y + +A + YM+ G P T LL+ D + V G +
Sbjct: 415 KDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRWI 474
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+++G FC+D V +L +Y G + ++F+ + +K+LV+W +++ +G
Sbjct: 475 HGFAIRHG-FCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMMKGCLSNGH 533
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ + LF + + S V + +S+ L +QIH V ++ + + + ANS
Sbjct: 534 ADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANS 593
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L++ Y +C + + +F ++ R++ +WN +I A A LE++ +M + + P+
Sbjct: 594 LISAYAKCGKLDLSAGLFFSLKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQPD 653
Query: 242 QTTFVYVINSC--AGL 255
+ TF V+ +C AGL
Sbjct: 654 ELTFSTVLTACSHAGL 669
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 146/336 (43%), Gaps = 53/336 (15%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
K IHA V + L DV +GS ++ YA L + L F +I N +I WN+ ++ Y
Sbjct: 65 KKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVNDDISLWNSAMVDYFRA 124
Query: 322 SSPTSIFLL---IELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEY 374
P + +L ++L Q+G+ TF V++S + L L H +++ ++
Sbjct: 125 GYPEEVIILYKRLKLNQIGFNGKTITF--VMKSCTELKNLYLGKGVHADSLKLALSGNKF 182
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
V SL+ Y+K +D+ + ++ +I+A TG Y+ETV
Sbjct: 183 VGSSLIGLYSKFSKTNDSRG------VFEEIINKDIVAYTSMITG-YSETV--------- 226
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
D ++WN E+ M + + T VSLL L L G SLH
Sbjct: 227 DSIAWN--------------AFEIATDMLQNNLEVNRVTLVSLLQIAGNLGALQEGKSLH 272
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
+ I SD + +++ Y +CG+ S+ + + + V +W AL+S GLN
Sbjct: 273 CYSIRRAIGVSDDILETSIVNFYTRCGAYQSAATVL-QNSKGTVASWNALLS--GLN--- 326
Query: 555 QRALEKFREMEFL-------GFKPDRVALIAVLTAC 583
RA + F +++L PD V VL+AC
Sbjct: 327 -RAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSAC 361
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 158/566 (27%), Positives = 280/566 (49%), Gaps = 42/566 (7%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
+F +M ++SL WN+++ + E+ ++ F + R E + + +
Sbjct: 15 QMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELR 74
Query: 156 DLEFGEQIHGLVIKN-GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
++ +GE IHG V K+ +L V +SL+ MY +C + A +MF ++E D+V+W++++
Sbjct: 75 EVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMV 134
Query: 215 GALAESENFGKALELYLRMSV-DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
++ + +A+E + RM + V P++ T + ++++C L NS LG+ +H VI+
Sbjct: 135 SGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF 194
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-E 332
D+ + ++L++ YAK + A F I+ K+++SW+ +I Y + L+ +
Sbjct: 195 SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFND 254
Query: 333 LLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
++ G PN T VL++ A L+ H L IR G E
Sbjct: 255 MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLE------------------ 296
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
T + + A+V +Y + E + S++ R D+VSW +I+
Sbjct: 297 --------TEVKVSTALVD------MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTL 342
Query: 449 NGDYKEVLELFKYMR-AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
NG +E F M PD V +L +CS+L L H + K S+
Sbjct: 343 NGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGF-DSNP 401
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM-EF 566
F+ L+++Y +CGS+G++ K+FN + ++ + WT+LI+ G++G +ALE F M +
Sbjct: 402 FIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKS 461
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
KP+ V +++L+AC H GL+ EG+ +F+ M Y + P ++HY +VDLL R G L
Sbjct: 462 SEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLD 521
Query: 627 EAEKIITTMPFPPNALIWRTFLEGCQ 652
A +I MPF P I T L C+
Sbjct: 522 TAIEITKRMPFSPTPQILGTLLGACR 547
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 145/543 (26%), Positives = 261/543 (48%), Gaps = 42/543 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
M R++ +N+++ + SR E+ L F +M +P FT L +C L V G
Sbjct: 20 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 79
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V K+ +D +VG++L+ +Y + G + E + +F+++ + +VTW+S+VS F K
Sbjct: 80 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 139
Query: 119 HGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G + F +V S+V + + ++ + + G +HG VI+ GF +L
Sbjct: 140 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 199
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ NSL+N Y + A +FK + +DV+SW+T+I ++ +AL ++ M D
Sbjct: 200 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 259
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN T + V+ +CA + G+ H I+ LE +V V +ALVD Y KC + E A+
Sbjct: 260 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 319
Query: 298 LCFSEISNKNIVSWNALILGYA-SKSSPTSI-FLLIELLQLGYRPNEFTFSHVLRSSLAF 355
FS I K++VSW ALI G+ + + SI I LL+ RP+ VL S
Sbjct: 320 AVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSEL 379
Query: 356 QLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L+ H +I+ G+++ ++ SL+ Y++ G + +A
Sbjct: 380 GFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA------------------- 420
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPD 470
K+ + + D V W +I +G + LE F +M +++ + P+
Sbjct: 421 -------------SKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPN 467
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF+S+LSACS + G + L+ ++ + +L+D+ G+ G + ++++I
Sbjct: 468 EVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEIT 527
Query: 531 NEM 533
M
Sbjct: 528 KRM 530
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 210/465 (45%), Gaps = 45/465 (9%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A +MF ++ R + WNT++ +L+ + + + L + M D P+ T + +C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 255 LQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
L+ G+ IH V K+ L D++VGS+L+ Y KC + A F E+ +IV+W++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 314 LILGYASKSSPTSI--FLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRM 367
++ G+ SP F ++ P+ T ++ + +L H +IR
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 368 GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
G+ N ++ SL+ YAKS RA + E V L
Sbjct: 193 GFSNDLSLVNSLLNCYAKS----------------RA----------------FKEAVNL 220
Query: 428 LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNL 487
+ D++SW+ VIA NG E L +F M P+ T + +L AC+ +L
Sbjct: 221 FKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDL 280
Query: 488 ALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
G H L I+K + ++ V L+DMY KC S + +F+ + ++V++W ALIS
Sbjct: 281 EQGRKTHELAIRKG--LETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALIS 338
Query: 547 ALGLNGFAQRALEKFREMEFL-GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
LNG A R++E+F M +PD + ++ VL +C G + E + F YG
Sbjct: 339 GFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFL-EQAKCFHSYVIKYGF 397
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ +V+L R G L A K+ + + ++W + + G
Sbjct: 398 DSNPFIGASLVELYSRCGSLGNASKVFNGIAL-KDTVVWTSLITG 441
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 249/530 (46%), Gaps = 51/530 (9%)
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV-- 202
+ + ++ ++L G++IH ++ NGF L SL+NMY +C + A +F D
Sbjct: 41 IASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTH 100
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
EI +V ++N II + + E Y +M + V P++ TF I +C + K
Sbjct: 101 EI-NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---K 156
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
IH + K LE DVF+GSALV+ Y K +E A + F E+ +++V WNA++ GYA
Sbjct: 157 KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIG 216
Query: 323 SPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLG 377
+ + P+ FT + VL L +H ++MGY++ V
Sbjct: 217 QFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSN 276
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
SL+ Y K I DAL ++ + DI
Sbjct: 277 SLIDMYGKCKCIEDAL--------------------------------EIFEMMREKDIF 304
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL- 496
SWN +++ GD+ L L M A I PD T ++L ACS L L G +HG
Sbjct: 305 SWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYM 364
Query: 497 ----IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+ K D + N +IDMY KCGS+ + +F M++++V +W +I G++G
Sbjct: 365 IVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHG 424
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY 612
+ ALE F M + KPD V + VL+AC H G V +G +M Y V P ++HY
Sbjct: 425 YGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHY 484
Query: 613 HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYDTL 662
CV+D+L R G L EA ++ TMP N ++WR L CR+ K+ L
Sbjct: 485 TCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAA---CRLHKHAVL 531
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 218/455 (47%), Gaps = 47/455 (10%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVEGAQLQA 63
NV +FN+IIS + G+ E+ + M N G P +FTF + +C L+ +E ++
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKAC--LDVLEIKKIHG 160
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+ K GL D F+G+AL+ Y + G ++ FE++P + +V WN++V+ + + G E
Sbjct: 161 LLFKFGLEL-DVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFE 219
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ F + V + + GV+ + DL G IHG +K G+D + V+NSL+
Sbjct: 220 MVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLI 279
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
+MY +C I A ++F+ + +D+ SWN+I+ + + L L RM + P+
Sbjct: 280 DMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLV 339
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALEC------DVFVGSALVDFYAKCDNLEGAH 297
T V+ +C+ L + G+ IH +I + L DV + +A++D YAKC ++ AH
Sbjct: 340 TVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAH 399
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
L F +SNK++ SWN +I+GY ++ + + ++ +P+E TF VL
Sbjct: 400 LVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVL------- 452
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIA 412
++ + +G +S F+ + V P +
Sbjct: 453 ------------------------SACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVI 488
Query: 413 GIYNRTGQYNETVKL-LSQLERPDIVSWNIVIAAC 446
+ R GQ +E +L L+ + V W ++AAC
Sbjct: 489 DMLGRAGQLDEAYELALTMPIEANPVVWRALLAAC 523
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 165/327 (50%), Gaps = 15/327 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC----DSLNPV 56
+P R+VV +N++++ Y++ G E L F M + P++FT G+LS LN
Sbjct: 197 LPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLN-- 254
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G + +K G + + V +L+ +YG+ C+++ + +FE M K + +WNSIVS+
Sbjct: 255 NGRIIHGFAMKMG-YDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVH 313
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI-----KNG 171
+ G + + L ++ + + + V+ S+ L G +IHG +I K+G
Sbjct: 314 EQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDG 373
Query: 172 FDY-ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
D ++L+ N++++MY +C + A +F+ + +DV SWN +I +ALE++
Sbjct: 374 KDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMF 433
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI-KNALECDVFVGSALVDFYAK 289
RM + P++ TFV V+++C+ G++ ++ K + + + ++D +
Sbjct: 434 SRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGR 493
Query: 290 CDNLEGAH-LCFSEISNKNIVSWNALI 315
L+ A+ L + N V W AL+
Sbjct: 494 AGQLDEAYELALTMPIEANPVVWRALL 520
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M +++V S+N +I Y GY +AL MF M +P + TF G+LS C V
Sbjct: 405 MSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQG 464
Query: 60 QLQASVLKNGLFCADAFVG-TALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVS 114
+ +K+ A T ++ + GR G LDE + MP + V W ++++
Sbjct: 465 RNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLA 521
>gi|125570343|gb|EAZ11858.1| hypothetical protein OsJ_01732 [Oryza sativa Japonica Group]
Length = 920
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 182/653 (27%), Positives = 314/653 (48%), Gaps = 42/653 (6%)
Query: 9 FNSIISAYSRCGYVEDALRMF--LYMINRGFEPTQFTFGGLLSCDSL-NPVEGAQLQASV 65
+NS + Y R GY E+ + ++ L + GF TF + SC L N G + A
Sbjct: 114 WNSAMVDYFRAGYPEEVIILYKRLKLNQIGFNGKTITFV-MKSCTELKNLYLGKGVHADS 172
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK--HGFVE 123
LK L + FVG++L+GLY + ++ VFE++ K +V + S+++ + +
Sbjct: 173 LKLAL-SGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAW 231
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY-ELLVANSL 182
+ + +++++ + + + V ++ N L+ G+ +H I+ + ++ S+
Sbjct: 232 NAFEIATDMLQNNLEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSI 291
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES-ENFGKALELYLRMSVDIVFPN 241
VN Y +C SA + ++ + V SWN ++ L + ++F L + + V P+
Sbjct: 292 VNFYTRCGAYQSAATVLQNSK-GTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPD 350
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TF V+++CA L SIHA I+ + DV + +AL++ Y KC + + F
Sbjct: 351 SVTFANVLSACAELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYLFD 410
Query: 302 EISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
++ K++VS+NA+I GY + + LL ++ G P+ F+ VL AF
Sbjct: 411 QLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPD---FATVLSLLAAFA---- 463
Query: 361 HCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+ + V G + +A + G SD V N I +Y+ G
Sbjct: 464 ---------DQRDLVRGRWIHGFAIRHGFCSD-------------VDVENQILYMYSACG 501
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+ + LE+ ++VSW ++ C NG EV++LF+ M+ PD+ + V+ +
Sbjct: 502 KIAAARAIFDSLEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQ 561
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
A S L +L +H + ++ ++ D N LI Y KCG + S +F + RN+
Sbjct: 562 AVSDLGHLNGLKQIHCFVYRS-LLEKDKITANSLISAYAKCGKLDLSAGLFFSLKYRNLD 620
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
TW A+ISA ++GF LE F++ME +PD + VLTAC H GLV++G +F M
Sbjct: 621 TWNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTACSHAGLVKDGWRIFNSM 680
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y V P+ +HY C+VDLL R GHL++ K I + I+ L C+
Sbjct: 681 TSVYSVLPQEEHYGCMVDLLGRAGHLEDGYKFIKLSTLKDKSTIFCALLSACR 733
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/532 (24%), Positives = 238/532 (44%), Gaps = 44/532 (8%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ A+V +GL C D +G+ +L Y G L E VF+ + + WNS + + +
Sbjct: 66 KIHANVFTHGL-CWDVILGSKILSCYANLGALHESRLVFQKIVNDDISLWNSAMVDYFRA 124
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G+ E+ + L+ L +++ + V+ + ++L G+ +H +K V
Sbjct: 125 GYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFVG 184
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN--FGKALELYLRMSVDI 237
+SL+ +Y + + + +F+++ +D+V++ ++I +E+ + A E+ M +
Sbjct: 185 SSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQNN 244
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE-CDVFVGSALVDFYAKCDNLEGA 296
+ N+ T V ++ L GKS+H I+ A+ D + +++V+FY +C + A
Sbjct: 245 LEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSA 304
Query: 297 HLCFSEISNKNIVSWNALILGY--ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
S + SWNAL+ G A +S +L + L + P+ TF++VL +
Sbjct: 305 ATVLQN-SKGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAE 363
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+H IR IP VV
Sbjct: 364 LCYFCFAASIHAYFIRRF--------------------------------IPMDVVLTTA 391
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ +Y + + + L QL D+VS+N +I N E L YM A + PD
Sbjct: 392 LIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPD 451
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
T +SLL+A + +L G +HG + SD V N ++ MY CG I ++ IF
Sbjct: 452 FATVLSLLAAFADQRDLVRGRWIHGFAIR-HGFCSDVDVENQILYMYSACGKIAAARAIF 510
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ + +N+++WTA++ NG A ++ F+ M+ G KPD V+L+ + A
Sbjct: 511 DSLEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQA 562
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 172/348 (49%), Gaps = 5/348 (1%)
Query: 6 VVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLLS-CDSLNPV-EGAQLQ 62
V S+N+++S +R G +A++ M++ P TF +LS C L A +
Sbjct: 315 VASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIH 374
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
A ++ D + TAL+ +Y + + +F+ + K +V++N+++ + ++
Sbjct: 375 AYFIRR-FIPMDVVLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMA 433
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ L ++ VA ++ + ++ ++++DL G IHG I++GF ++ V N +
Sbjct: 434 NEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQI 493
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
+ MY C I +A +F +E +++VSW ++ + + + ++L+ M P+
Sbjct: 494 LYMYSACGKIAAARAIFDSLEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDS 553
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
+ V + + + L + K IH V ++ LE D ++L+ YAKC L+ + F
Sbjct: 554 VSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGKLDLSAGLFFS 613
Query: 303 ISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVL 349
+ +N+ +WNA+I YA ++ + ++ + +P+E TFS VL
Sbjct: 614 LKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVL 661
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 130/256 (50%), Gaps = 5/256 (1%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQL 61
++VVS+N++I Y + +A + YM+ G P T LL+ D + V G +
Sbjct: 415 KDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRWI 474
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+++G FC+D V +L +Y G + ++F+ + +K+LV+W +++ +G
Sbjct: 475 HGFAIRHG-FCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMMKGCLSNGH 533
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ + LF + + S V + +S+ L +QIH V ++ + + + ANS
Sbjct: 534 ADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANS 593
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L++ Y +C + + +F ++ R++ +WN +I A A LE++ +M + + P+
Sbjct: 594 LISAYAKCGKLDLSAGLFFSLKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQPD 653
Query: 242 QTTFVYVINSC--AGL 255
+ TF V+ +C AGL
Sbjct: 654 ELTFSTVLTACSHAGL 669
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 146/336 (43%), Gaps = 53/336 (15%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
K IHA V + L DV +GS ++ YA L + L F +I N +I WN+ ++ Y
Sbjct: 65 KKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVNDDISLWNSAMVDYFRA 124
Query: 322 SSPTSIFLL---IELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEY 374
P + +L ++L Q+G+ TF V++S + L L H +++ ++
Sbjct: 125 GYPEEVIILYKRLKLNQIGFNGKTITF--VMKSCTELKNLYLGKGVHADSLKLALSGNKF 182
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
V SL+ Y+K +D+ + ++ +I+A TG Y+ETV
Sbjct: 183 VGSSLIGLYSKFSKTNDSRG------VFEEIINKDIVAYTSMITG-YSETV--------- 226
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
D ++WN E+ M + + T VSLL L L G SLH
Sbjct: 227 DSIAWN--------------AFEIATDMLQNNLEVNRVTLVSLLQIAGNLGALQEGKSLH 272
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
+ I SD + +++ Y +CG+ S+ + + + V +W AL+S GLN
Sbjct: 273 CYSIRRAIGVSDDILETSIVNFYTRCGAYQSAATVL-QNSKGTVASWNALLS--GLN--- 326
Query: 555 QRALEKFREMEFL-------GFKPDRVALIAVLTAC 583
RA + F +++L PD V VL+AC
Sbjct: 327 -RAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSAC 361
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 163/607 (26%), Positives = 285/607 (46%), Gaps = 43/607 (7%)
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGC--LDEVVSVFEDMPRKSLVTWNSIV 113
V A+ AS+LK+G+ + LL Y R L VF+++PR+ V+WN+++
Sbjct: 8 VAAARSHASLLKSGVAAPTPW--NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALL 65
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
+ G + L + +A + + + + G Q+ L +K+G
Sbjct: 66 AAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLA 125
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ A++L+++Y +C + A ++F + R+ VSWN +I ES + ALEL+L M
Sbjct: 126 NNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEM 185
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ + P++ TF ++ + G + L +H K++K + V +A + Y++C +L
Sbjct: 186 EREGLAPDEATFASLLTAVEG-PSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSL 244
Query: 294 EGAHLCFSEISN-KNIVSWNALILGYASKS-SPTSIFLLIELLQ-LGYRPNEFTFSHVLR 350
+ + F I + ++++SWNA++ Y ++ + ++Q G P+ ++F+ ++
Sbjct: 245 KDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIIS 304
Query: 351 SSLAF-----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
S Q +H L+I+ E V +L+ Y +
Sbjct: 305 SCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTR-------------------- 344
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
YN + K + L D VSWN ++ + +G + L+ F+ M +
Sbjct: 345 ---------YNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSE 395
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ D Y F + L + S+L L LG +HGL+ + S+D FV + LI MY K G I
Sbjct: 396 NVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASND-FVSSSLIFMYSKSGIIDD 454
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ K F E + + W A+I +G A+ F EM D + + ++T+C H
Sbjct: 455 ARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSH 514
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GLV EG E+ M YGV M+HY C VDL R G L +A+K+I +MPF P+A++W
Sbjct: 515 AGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWM 574
Query: 646 TFLEGCQ 652
T L C+
Sbjct: 575 TLLGACR 581
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 156/568 (27%), Positives = 283/568 (49%), Gaps = 52/568 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
+P R+ VS+N++++A + G +A R+ M +G F G L ++ P G
Sbjct: 53 VPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIG 112
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
AQLQ+ LK+GL + F +ALL +Y + G + + VF+ MP ++ V+WN++++ + +
Sbjct: 113 AQLQSLALKSGL-ANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTE 171
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + LF E+ R +A E++F ++ + Q+HG ++K G L V
Sbjct: 172 SGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCF-LMHQLHGKIVKYGSALGLTV 230
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
N+ + Y QC + + ++F + +IRD++SWN ++GA + +A++ ++RM +
Sbjct: 231 LNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQES 290
Query: 238 -VFPNQTTFVYVINSCAGL-QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN--- 292
V P+ +F +I+SC+ + G+ IH VIK+ALE V +AL+ Y + +
Sbjct: 291 GVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCM 350
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
+E A+ CF+ + K+ VSWN+++ GY+ S ++ + R +E+ FS LRS
Sbjct: 351 MEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRS 410
Query: 352 SLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
S +LQL H L+I G+ + ++V SL+ Y+KSG+I DA
Sbjct: 411 SSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDAR-------------- 456
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
K + ++ V WN +I A +G + V LF M +
Sbjct: 457 ------------------KSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKA 498
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLI--KKTEIISSDTFVCNMLIDMYGKCGSIGS 525
D+ TFV L+++CS + GS + + K + + + C +D+YG+ G +
Sbjct: 499 PLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACG--VDLYGRAGQLDK 556
Query: 526 SVKIFNEMT-DRNVITWTALISALGLNG 552
+ K+ + M + + + W L+ A ++G
Sbjct: 557 AKKLIDSMPFEPDAMVWMTLLGACRIHG 584
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 225/495 (45%), Gaps = 51/495 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGA- 59
MP+RN VS+N++I+ Y+ G + AL +FL M G P + TF LL+ VEG
Sbjct: 154 MPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTA-----VEGPS 208
Query: 60 -----QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-KSLVTWNSIV 113
QL ++K G + A+ Y + G L + +F+ + + L++WN+++
Sbjct: 209 CFLMHQLHGKIVKYGSALGLTVLNAAITA-YSQCGSLKDSRRIFDGIGDIRDLISWNAML 267
Query: 114 SIFGKHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNE-QDLEFGEQIHGLVIKNG 171
+ +G ++ M F +++ S V SF +I S D G IHGLVIK+
Sbjct: 268 GAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSA 327
Query: 172 FDYELLVANSLVNMYFQ----CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKAL 227
+ V N+L+ MY + C + A K F + ++D VSWN+++ ++ AL
Sbjct: 328 LEGVTPVCNALIAMYTRYNENCM-MEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADAL 386
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
+ + M + V ++ F + S + L LGK IH VI + + FV S+L+ Y
Sbjct: 387 KFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMY 446
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFS 346
+K ++ A F E + V WNA+I GYA ++ +L E+LQ + TF
Sbjct: 447 SKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFV 506
Query: 347 HVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
++ S H ++ G E +L ++ T Y +P +
Sbjct: 507 GLITSC-------SHAGLVDEGSE----ILNTMETKYG----------------VPLRME 539
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+Y R GQ ++ KL+ + PD + W ++ AC +G+ + ++ ++ A
Sbjct: 540 HYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVA 599
Query: 466 RIYPDNYTFVSLLSA 480
P ++ LLS+
Sbjct: 600 E--PRQHSTYVLLSS 612
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 218/419 (52%), Gaps = 12/419 (2%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN--LEGAHL 298
N ++++ C+ ++ + IH +++K L D S L+ F A ++ L A
Sbjct: 17 NAAQTLHLLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYART 73
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVLRS----SL 353
F I N WN +I GY++ P LL + P N +TF +L++ S
Sbjct: 74 VFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSA 133
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ + Q+H II+MG+ + Y SL+ Y+KSG I A ++ R V N +
Sbjct: 134 SEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVD-QRDTVSWNSMID 192
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
Y + G+ ++ + + +I+SW +I+ C G KE L LF M+ A I DN
Sbjct: 193 GYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVA 252
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
VS L AC+ L L G +H IKK EI C +LIDMY KCG + ++++F +M
Sbjct: 253 LVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGC-VLIDMYAKCGDLEEAIEVFRKM 311
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++ V WTA+IS ++G + ALE F +M+ G +P+++ +LTAC H GLV E
Sbjct: 312 EEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAK 371
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
LFE M R +G +P ++HY C+VDLL R G LKEAE++I MP PNA IW L C
Sbjct: 372 LLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACH 430
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 182/446 (40%), Gaps = 75/446 (16%)
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYG--RHGCLDEVVSVFEDMPRKSLVTWNS 111
N E Q+ +LK GL D + LL G L +VF+ + R + WN+
Sbjct: 30 NMEELRQIHGQMLKTGLIL-DEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNT 88
Query: 112 IVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG 171
++ + E+ + L+ ++ V +F ++ S+ E +QIH +IK G
Sbjct: 89 MIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMG 148
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF-------- 223
F E+ NSL+N+Y + I SA +F V+ RD VSWN++I +
Sbjct: 149 FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFN 208
Query: 224 --------------------GK---ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
GK AL L+ RM + + V + +CA L
Sbjct: 209 HMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQ 268
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA- 319
GK IHA + K+ +E D +G L+D YAKC +LE A F ++ K + W A+I GYA
Sbjct: 269 GKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAI 328
Query: 320 SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
++ +++ G PN+ TF+ +L
Sbjct: 329 HGRGREALEWFMKMQTAGVEPNQMTFTGIL------------------------------ 358
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RP 434
T+ + +GL+ +A ++ P+ + + R G E +L+ + +P
Sbjct: 359 -TACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKP 417
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFK 460
+ W ++ AC +G+ LEL K
Sbjct: 418 NAAIWGALLNACHIHGN----LELGK 439
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 199/431 (46%), Gaps = 29/431 (6%)
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS----- 194
+ES+ +H L ++E QIHG ++K G + + A+ L+ CA S
Sbjct: 14 SESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAF---CASPNSGSLAY 70
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A +F + + WNT+I + S+ +AL LY M V N TF +++ +C+
Sbjct: 71 ARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSS 130
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
+ S + IHA +IK +++ ++L++ Y+K +++ A L F ++ ++ VSWN++
Sbjct: 131 MSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSM 190
Query: 315 ILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYE 370
I GY + I + E+ N +++ ++ + + L L + G +
Sbjct: 191 IDGY---TKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIK 247
Query: 371 NYEYVLGSLMTSYAKSGLISDAL---AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
L S + + A G++ A++ I + ++ +Y + G E +++
Sbjct: 248 LDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEV 307
Query: 428 LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNL 487
++E + W +I+ A +G +E LE F M+ A + P+ TF +L+ACS +
Sbjct: 308 FRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACS---HA 364
Query: 488 ALGSSLHGLIKKTEII-----SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITW 541
L L + E I S + + C ++D+ G+ G + + ++ M + N W
Sbjct: 365 GLVHEAKLLFESMERIHGFKPSIEHYGC--MVDLLGRAGLLKEAEELIENMPVKPNAAIW 422
Query: 542 TALISALGLNG 552
AL++A ++G
Sbjct: 423 GALLNACHIHG 433
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 133/286 (46%), Gaps = 36/286 (12%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ-LQ 62
N +N++I YS E+AL ++ +M+ +TF LL +C S++ E Q +
Sbjct: 82 NTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIH 141
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHG-------CLDEV--------------------- 94
A ++K G F ++ + +LL +Y + G D+V
Sbjct: 142 AHIIKMG-FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEI 200
Query: 95 ---VSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
+F MP +++++W S++S G ++ + LF + + + L + V +
Sbjct: 201 EMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQAC 260
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
++ L+ G+ IH + K+ + + ++ L++MY +C + A ++F+ +E + V W
Sbjct: 261 ADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWT 320
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC--AGL 255
+I A +ALE +++M V PNQ TF ++ +C AGL
Sbjct: 321 AMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGL 366
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 105/225 (46%), Gaps = 15/225 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEGA 59
MP+RN++S+ S+IS G ++AL +F M G + L +C L ++
Sbjct: 210 MPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQG 269
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + +K D +G L+ +Y + G L+E + VF M K + W +++S + H
Sbjct: 270 KWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIH 329
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVI-----HGLSNEQDLEFG--EQIHGLVIKNGF 172
G + + F ++ + V + +F G++ GL +E L F E+IH GF
Sbjct: 330 GRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIH------GF 383
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
+ +V++ + + AE++ +++ ++ + W ++ A
Sbjct: 384 KPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNA 428
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 151/503 (30%), Positives = 254/503 (50%), Gaps = 13/503 (2%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCA------GIWSAEKMFKDVEIRDVVSWNTII 214
+QIH ++ +GF VA+ L+ Y + G+ A ++F + D +NT++
Sbjct: 27 DQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARRLFDRIPEPDRFMYNTLV 86
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
A + S+ +AL L+ + + PN+ T +V+ +C ++ + H V+K
Sbjct: 87 RAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEHALAAHGVVVKLGFV 146
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-EL 333
+FV +AL+ F+A +L + F E++++N+VSWN +I GYA + L E+
Sbjct: 147 QQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGYAQAGEVSEACALFGEM 206
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
G + FT +L + + L++ HC ++ G + +L+ Y K G +
Sbjct: 207 RHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALLDMYGKCGDL 266
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
A + I V +++ + G + Q+ +IVSWN +I+
Sbjct: 267 WMAHRCFDMMPIKNVVTWTSMLCA-QAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQC 325
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
G E L+L+ MR+ I PD +T +LSAC + +LA G +H ++ T +
Sbjct: 326 GRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNFNDPGVTLL 385
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
N L+DMY +CG + +++ +F EM ++NVI+W +I AL ++G AQ + FR M F
Sbjct: 386 -NSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETVTFFRTMVSDAF 444
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
PD + + +L+AC HGGL+ G FE M R Y VEPE++HY C+VDLL R GHL +A
Sbjct: 445 SPDEITFVGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLGRRGHLAKAV 504
Query: 630 KIITTMPFPPNALIWRTFLEGCQ 652
+I M P+ ++W L C+
Sbjct: 505 NLIKDMSIKPDVVVWGALLGACR 527
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/521 (23%), Positives = 248/521 (47%), Gaps = 22/521 (4%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLY------GRHGCLDEVVSVFED 100
L C S+ ++ Q+ A ++ +G F + V + L+ Y R G L +F+
Sbjct: 17 LRQCRSIQHLD--QIHAHLVVHG-FSDVSSVASQLIASYCTLSAGDRDGGLCHARRLFDR 73
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
+P +N++V + ++ + L +++ + E + V+ + + +E
Sbjct: 74 IPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEHA 133
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
HG+V+K GF ++ VAN+L++ + + + + F ++ R+VVSWNT+IG A++
Sbjct: 134 LAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGYAQA 193
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
+A L+ M + + T V ++ +C+ N +G+ +H ++ + D +G
Sbjct: 194 GEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILG 253
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP 340
+AL+D Y KC +L AH CF + KN+V+W +++ A S ++ E Q+ R
Sbjct: 254 NALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFE--QMPERN 311
Query: 341 ----NEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF- 395
N +V L + L L+ + +G E+ L ++++ ++G ++
Sbjct: 312 IVSWNAMISCYVQCGRL-HETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIH 370
Query: 396 ---VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
N P V N + +Y R GQ + + L +++ +++SWN++I A A +G
Sbjct: 371 CYVRDNFNDP-GVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRA 429
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
+E + F+ M + PD TFV LLSACS L G + + + +
Sbjct: 430 QETVTFFRTMVSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGC 489
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNG 552
++D+ G+ G + +V + +M+ + +V+ W AL+ A ++G
Sbjct: 490 MVDLLGRRGHLAKAVNLIKDMSIKPDVVVWGALLGACRIHG 530
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 224/500 (44%), Gaps = 70/500 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+P+ + +N+++ AYS ++ALR+ ++ RG P +FT +L +C ++ VE A
Sbjct: 74 IPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEHA 133
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
V+ F FV ALL + G L + F +M +++V+WN+++ + +
Sbjct: 134 LAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGYAQA 193
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G V + LF E+ + + V ++ S+E +LE G +H ++ +G + ++
Sbjct: 194 GEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILG 253
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEI-------------------------------RDVV 208
N+L++MY +C +W A + F + I R++V
Sbjct: 254 NALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIV 313
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SWN +I + + L+LY RM + P++ T V+++C + GK IH V
Sbjct: 314 SWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYV 373
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI--LGYASKSSPTS 326
N + V + ++L+D YA+C ++ A F+E+ NKN++SWN +I L ++ T
Sbjct: 374 RDNFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETV 433
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
F ++ + P+E TF +L + LL E EY ++ Y
Sbjct: 434 TFFRT-MVSDAFSPDEITFVGLLSACSHGGLL-----------EAGEYYFEAMARVY--- 478
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAA 445
N+ V + + R G + V L+ + +PD+V W ++ A
Sbjct: 479 -------------NVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSIKPDVVVWGALLGA 525
Query: 446 CAHNGDY-------KEVLEL 458
C +G+ K++LEL
Sbjct: 526 CRIHGNVEIGKLVIKQLLEL 545
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 157/572 (27%), Positives = 268/572 (46%), Gaps = 42/572 (7%)
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL--VRSEVALTESSFVG 146
G L VF+ MP +V+W SI+ + ++ + LF + V V+ S
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
V+ ++ +GE +H +K + V +SL++MY + I + ++F ++ R+
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
V+W II L + + + L + MS + TF + +CAGL+ GK+IH
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT- 325
VI + V ++L Y +C ++ F +S +++VSW +LI+ Y
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMT 381
++ I++ PNE TF+ + + + L QLHC ++ +G + V S+M
Sbjct: 294 AVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMK 353
Query: 382 SYAKSG-LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
Y+ G L+S ++ F G+ R DI+SW+
Sbjct: 354 MYSTCGNLVSASVLF----------------QGMRCR-----------------DIISWS 380
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
+I G +E + F +MR + P ++ SLLS + + G +H L
Sbjct: 381 TIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCF 440
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
+ + T V + LI+MY KCGSI + IF E ++++ TA+I+ +G ++ A++
Sbjct: 441 GLEQNST-VRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDL 499
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
F + +GF+PD V I+VLTAC H G + G F M +Y + P +HY C+VDLL
Sbjct: 500 FEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLC 559
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G L +AEK+I M + + ++W T L C+
Sbjct: 560 RAGRLSDAEKMINEMSWKKDDVVWTTLLIACK 591
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 159/578 (27%), Positives = 274/578 (47%), Gaps = 46/578 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM--INRGFEPTQFTFGGLLSC--DSLNPV 56
MP ++VS+ SII Y ++AL +F M ++ P +L S N
Sbjct: 66 MPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIA 125
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G L A +K L + +VG++LL +Y R G +D+ VF +MP ++ VTW +I++
Sbjct: 126 YGESLHAYAVKTSLL-SSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGL 184
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G ++ + F E+ RSE +F + + + +++G+ IH VI GF L
Sbjct: 185 VHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTL 244
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VANSL MY +C + +F+++ RDVVSW ++I A KA+E +++M
Sbjct: 245 CVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNS 304
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN+ TF + ++CA L + G+ +H V+ L + V ++++ Y+ C NL A
Sbjct: 305 QVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSA 364
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAF 355
+ F + ++I+SW+ +I GY F + Q G +P +F + +L S
Sbjct: 365 SVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNM 424
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
++ Q+H L + G E V SL+ Y+K G I + A++I
Sbjct: 425 AVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKE----------------ASMI 468
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
G + +R DIVS +I A +G KE ++LF+ PD+
Sbjct: 469 FG----------------ETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDS 512
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+S+L+AC+ L LG ++++T + ++D+ + G + + K+ N
Sbjct: 513 VTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMIN 572
Query: 532 EMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
EM+ ++ + WT L+ A G +RA E+ E++
Sbjct: 573 EMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELD 610
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 207/455 (45%), Gaps = 33/455 (7%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV--DI 237
NS + + +A ++F + D+VSW +II + N +AL L+ M V
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ + V+ +C N G+S+HA +K +L V+VGS+L+D Y + ++ +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 298 LCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
FSE+ +N V+W A+I G + E+ + + +TF+ L++ +
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
++ G + +V+ FVT L + AN +A +Y
Sbjct: 224 Q-------VKYGKAIHTHVI---------------VRGFVTTLCV------ANSLATMYT 255
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
G+ + + L + D+VSW +I A G + +E F MR +++ P+ TF S
Sbjct: 256 ECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFAS 315
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+ SAC+ L L G LH + + S + V N ++ MY CG++ S+ +F M R
Sbjct: 316 MFSACASLSRLVWGEQLHCNVLSLGLNDSLS-VSNSMMKMYSTCGNLVSASVLFQGMRCR 374
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
++I+W+ +I GF + + F M G KP AL ++L+ + ++ EG
Sbjct: 375 DIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVI-EGGRQV 433
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ +G+E ++++ + G +KEA I
Sbjct: 434 HALALCFGLEQNSTVRSSLINMYSKCGSIKEASMI 468
>gi|356560343|ref|XP_003548452.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial-like [Glycine max]
Length = 578
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 153/505 (30%), Positives = 246/505 (48%), Gaps = 45/505 (8%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII----- 214
G+Q+H +IK GF + L + N ++ +Y +C EK+FK++ +R+VVSWN +I
Sbjct: 69 GKQLHAHLIKFGFCHVLSLQNQILGVYLKCMEAEDVEKLFKELPLRNVVSWNILIHGIVG 128
Query: 215 --GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
A+ N + RM ++ V P+ TTF +I C + +G +H +K
Sbjct: 129 CGNAIENYSNRQLCFSYFKRMLLETVVPDGTTFNGLIGVCVKFHDIAMGFQLHCFAVKFG 188
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE 332
L+ D FV S LVD YAKC +E A F + +++V WN +I YA P F +
Sbjct: 189 LDLDCFVESVLVDLYAKCGLVENAKRAFHVVPRRDLVMWNVMISCYALNWLPEEAFGMFN 248
Query: 333 LLQLG-YRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
L++LG +EFTFS +L + Q+H +I+R +++ V +L+ YAK+
Sbjct: 249 LMRLGGANGDEFTFSSLLSICDTLEYYDFGKQVHSIILRQSFDSDVLVASALINMYAKNE 308
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
I DA L ++ ++V+WN +I C
Sbjct: 309 NIIDA--------------------------------CNLFDRMVIRNVVAWNTIIVGCG 336
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
+ G+ +V++L + M +PD T S++S+C + H + K+ +
Sbjct: 337 NCGEGNDVMKLLREMLREGFFPDELTITSIISSCGYASAITETMEAHVFVVKSSFQEFSS 396
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
V N LI Y KCGSI S+ K F + +++TWT+LI+A +G A+ A+E F +M
Sbjct: 397 -VANSLISAYSKCGSITSACKCFRLTREPDLVTWTSLINAYAFHGLAKEAIEVFEKMLSC 455
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G PDR++ + V +AC H GLV +G+ F M Y + P+ Y C+VDLL R G + E
Sbjct: 456 GVIPDRISFLGVFSACSHCGLVTKGLHYFNLMTSVYKIVPDSGQYTCLVDLLGRRGLINE 515
Query: 628 AEKIITTMPFPPNALIWRTFLEGCQ 652
A + + +MP + F+ C
Sbjct: 516 AFEFLRSMPMEAESNTLGAFIGSCN 540
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/520 (25%), Positives = 249/520 (47%), Gaps = 49/520 (9%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV-SI 115
EG QL A ++K G FC + +LG+Y + ++V +F+++P +++V+WN ++ I
Sbjct: 68 EGKQLHAHLIKFG-FCHVLSLQNQILGVYLKCMEAEDVEKLFKELPLRNVVSWNILIHGI 126
Query: 116 FGKHGFVED------CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
G +E+ C F ++ V ++F G+I D+ G Q+H +K
Sbjct: 127 VGCGNAIENYSNRQLCFSYFKRMLLETVVPDGTTFNGLIGVCVKFHDIAMGFQLHCFAVK 186
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
G D + V + LV++Y +C + +A++ F V RD+V WN +I A + +A +
Sbjct: 187 FGLDLDCFVESVLVDLYAKCGLVENAKRAFHVVPRRDLVMWNVMISCYALNWLPEEAFGM 246
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
+ M + ++ TF +++ C L+ GK +H+ +++ + + DV V SAL++ YAK
Sbjct: 247 FNLMRLGGANGDEFTFSSLLSICDTLEYYDFGKQVHSIILRQSFDSDVLVASALINMYAK 306
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHV 348
+N+ A F + +N+V+WN +I+G + + LL E+L+ G+ P+E T + +
Sbjct: 307 NENIIDACNLFDRMVIRNVVAWNTIIVGCGNCGEGNDVMKLLREMLREGFFPDELTITSI 366
Query: 349 LRS----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
+ S S + ++ H +++ ++ + V SL+++Y+K G I+ A
Sbjct: 367 ISSCGYASAITETMEAHVFVVKSSFQEFSSVANSLISAYSKCGSITSA------------ 414
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
K PD+V+W +I A A +G KE +E+F+ M +
Sbjct: 415 --------------------CKCFRLTREPDLVTWTSLINAYAFHGLAKEAIEVFEKMLS 454
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+ PD +F+ + SACS + G L+ I D+ L+D+ G+ G I
Sbjct: 455 CGVIPDRISFLGVFSACSHCGLVTKGLHYFNLMTSVYKIVPDSGQYTCLVDLLGRRGLIN 514
Query: 525 SSVKIFNEMT-DRNVITWTALISALGLN---GFAQRALEK 560
+ + M + T A I + L+ G A+ A EK
Sbjct: 515 EAFEFLRSMPMEAESNTLGAFIGSCNLHENIGMAKWAAEK 554
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 196/416 (47%), Gaps = 20/416 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCG-YVED------ALRMFLYMINRGFEPTQFTFGGLLS-CDS 52
+P RNVVS+N +I CG +E+ F M+ P TF GL+ C
Sbjct: 111 LPLRNVVSWNILIHGIVGCGNAIENYSNRQLCFSYFKRMLLETVVPDGTTFNGLIGVCVK 170
Query: 53 LNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNS 111
+ + G QL +K GL D FV + L+ LY + G ++ F +PR+ LV WN
Sbjct: 171 FHDIAMGFQLHCFAVKFGLD-LDCFVESVLVDLYAKCGLVENAKRAFHVVPRRDLVMWNV 229
Query: 112 IVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG 171
++S + + E+ +F + E +F ++ + +FG+Q+H ++++
Sbjct: 230 MISCYALNWLPEEAFGMFNLMRLGGANGDEFTFSSLLSICDTLEYYDFGKQVHSIILRQS 289
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
FD ++LVA++L+NMY + I A +F + IR+VV+WNTII ++L
Sbjct: 290 FDSDVLVASALINMYAKNENIIDACNLFDRMVIRNVVAWNTIIVGCGNCGEGNDVMKLLR 349
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
M + FP++ T +I+SC H V+K++ + V ++L+ Y+KC
Sbjct: 350 EMLREGFFPDELTITSIISSCGYASAITETMEAHVFVVKSSFQEFSSVANSLISAYSKCG 409
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTF----- 345
++ A CF ++V+W +LI YA + +I + ++L G P+ +F
Sbjct: 410 SITSACKCFRLTREPDLVTWTSLINAYAFHGLAKEAIEVFEKMLSCGVIPDRISFLGVFS 469
Query: 346 --SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
SH + L + ++ ++ +Y L+ + GLI++A F+ ++
Sbjct: 470 ACSHCGLVTKGLHYFNLMTSVYKIVPDSGQYT--CLVDLLGRRGLINEAFEFLRSM 523
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 10/253 (3%)
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE-------VLELFKY 461
N I G+Y + + + KL +L ++VSWNI+I G+ E FK
Sbjct: 89 NQILGVYLKCMEAEDVEKLFKELPLRNVVSWNILIHGIVGCGNAIENYSNRQLCFSYFKR 148
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M + PD TF L+ C K ++A+G LH K + D FV ++L+D+Y KCG
Sbjct: 149 MLLETVVPDGTTFNGLIGVCVKFHDIAMGFQLHCFAVKFGL-DLDCFVESVLVDLYAKCG 207
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ ++ + F+ + R+++ W +IS LN + A F M G D ++L+
Sbjct: 208 LVENAKRAFHVVPRRDLVMWNVMISCYALNWLPEEAFGMFNLMRLGGANGDEFTFSSLLS 267
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
C G ++ + R + ++ ++++ + ++ +A + M N
Sbjct: 268 ICDTLEYYDFGKQVHSIILRQ-SFDSDVLVASALINMYAKNENIIDACNLFDRMVIR-NV 325
Query: 642 LIWRTFLEGCQRC 654
+ W T + GC C
Sbjct: 326 VAWNTIIVGCGNC 338
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA- 59
PD +V++ S+I+AY+ G ++A+ +F M++ G P + +F G+ S C V
Sbjct: 424 PD--LVTWTSLINAYAFHGLAKEAIEVFEKMLSCGVIPDRISFLGVFSACSHCGLVTKGL 481
Query: 60 ---QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS 105
L SV K D+ T L+ L GR G ++E MP ++
Sbjct: 482 HYFNLMTSVYK---IVPDSGQYTCLVDLLGRRGLINEAFEFLRSMPMEA 527
>gi|223635620|sp|O49680.2|PP324_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19220, mitochondrial; Flags: Precursor
Length = 951
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 185/669 (27%), Positives = 325/669 (48%), Gaps = 57/669 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M R++VS+N+I++ G+ +L+ F M G E TF ++S C S+ + G
Sbjct: 249 MEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLG 308
Query: 59 AQLQASVLKNGLFC-ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
L V+K+G A VG +++ +Y + G + +VFE++ + +++ N+I++ F
Sbjct: 309 ESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFA 368
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF---GEQIHGLVIKNGFDY 174
+G E+ + ++ V + V+ S DL F G +HG ++
Sbjct: 369 ANGMFEEAFGILNQM--QSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQS 426
Query: 175 ELL-VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
L V NS+++MY +C AE +FK RD+VSWN++I A +++ KA L+ +
Sbjct: 427 RALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV 486
Query: 234 SVDIVFP--NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
+ + +T + ++ SC + I GKS+H + K ++ +++++ Y C
Sbjct: 487 VSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYIGCR 546
Query: 292 NLEGAHLCFSEIS-NKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLR 350
+L A L +S +++ SWN++I G AS H L
Sbjct: 547 DLTSAFLRLETMSETRDLTSWNSVISGCASSG------------------------HHLE 582
Query: 351 SSLAFQLLQL-----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL-AFVTALNIPRA 404
S AFQ + H LI +G + LG ++ GL +L T L
Sbjct: 583 SLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQ---- 638
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
N + +Y R VK+ + P++ SWN VI+A + N +EV +LF R
Sbjct: 639 ----NTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF---RN 691
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLH-GLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
++ P+ TFV LLSA ++L + + G H LI++ ++ FV L+DMY CG +
Sbjct: 692 LKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRG--FQANPFVSAALVDMYSSCGML 749
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG-FKPDRVALIAVLTA 582
+ +K+F ++ W ++ISA G +G ++A+E F+E+ +P++ + I++L+A
Sbjct: 750 ETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSA 809
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H G + EG+ +++M +GV+P +H +VD+L R G L+EA + IT + P A
Sbjct: 810 CSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAG 869
Query: 643 IWRTFLEGC 651
+W L C
Sbjct: 870 VWGALLSAC 878
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 171/647 (26%), Positives = 307/647 (47%), Gaps = 55/647 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG--FEPTQFTFGGLLSCDSLNPVEG 58
+ +++V+ +NS+I+A ++ G A+ +F+ MI++G F+ T +
Sbjct: 148 LKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKC 207
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ L ++ GL D+ + AL+ LY + L VF M + +V+WN+I++
Sbjct: 208 SMLHCLAIETGLV-GDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLA 266
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE--L 176
+G + F + S +F VI S+ ++L GE +HGLVIK+G+ E +
Sbjct: 267 NGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHV 326
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SV 235
V NS+++MY +C +AE +F+++ RDV+S N I+ A + F +A + +M SV
Sbjct: 327 SVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSV 386
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF-VGSALVDFYAKCDNLE 294
D + P+ T V + + C L S G+++H ++ ++ V ++++D Y KC
Sbjct: 387 DKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTT 446
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL----- 349
A L F +++++VSWN++I ++ L + + Y ++F+ S VL
Sbjct: 447 QAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTS 506
Query: 350 ---RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
SL F +HC + ++G+ + N+ A
Sbjct: 507 CDSSDSLIFG-KSVHCWLQKLGFGD----------------------------NMLSANS 537
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAA 465
N+ G + T + ++L + E D+ SWN VI+ CA +G + E L F+ M R
Sbjct: 538 VINMYIGCRDLTSAF---LRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREG 594
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+I D T + +SA L + G HGL K+ + DT + N LI MYG+C I S
Sbjct: 595 KIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKS-LRELDTQLQNTLITMYGRCKDIES 653
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+VK+F ++D N+ +W +ISAL N + + FR ++ +P+ + + +L+A
Sbjct: 654 AVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQ 710
Query: 586 GGLVREGMELF-ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
G GM+ + R + P + +VD+ G L+ K+
Sbjct: 711 LGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKV 755
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 135/539 (25%), Positives = 250/539 (46%), Gaps = 43/539 (7%)
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
LK GL D + LL YGR G L +F+++ K ++ WNS+++ ++G
Sbjct: 113 ALKCGLL-QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIA 171
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ LF E++ ++ + LS+ +H L I+ G + + N+L+N
Sbjct: 172 AVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMN 231
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
+Y + + SAE +F +E RD+VSWNTI+ + + K+L+ + M+ + T
Sbjct: 232 LYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVT 291
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNAL--ECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
F VI++C+ ++ LG+S+H VIK+ E V VG++++ Y+KC + E A F E
Sbjct: 292 FSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEE 351
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLIELLQL--GYRPNEFTFSHVLR--SSLAFQLL 358
+ ++++S NA++ G+A+ F ++ +Q +P+ T + L+F
Sbjct: 352 LVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFS-- 409
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
R G + Y + M S RA+ N + +Y +
Sbjct: 410 -------REGRAVHGYTVRMEMQS--------------------RALEVINSVIDMYGKC 442
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY---TFV 475
G + L D+VSWN +I+A + NG + LFK + + + T +
Sbjct: 443 GLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV-VSEYSCSKFSLSTVL 501
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
++L++C +L G S+H ++K + N +I+MY C + S+ M++
Sbjct: 502 AILTSCDSSDSLIFGKSVHCWLQKLG-FGDNMLSANSVINMYIGCRDLTSAFLRLETMSE 560
Query: 536 -RNVITWTALISALGLNGFAQRALEKFREMEFLG-FKPDRVALIAVLTACRHGGLVREG 592
R++ +W ++IS +G +L F+ M G + D + L+ ++A + GLV +G
Sbjct: 561 TRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQG 619
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 135/539 (25%), Positives = 242/539 (44%), Gaps = 50/539 (9%)
Query: 128 LFCELVRSEVALTESSFV---GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
LF EL E ESSF+ V+ + E +H +K G +L ++ L+
Sbjct: 71 LFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLT 130
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
Y + + S+ +F +++ +DV+ WN++I AL ++ + A+ L++ M I N+
Sbjct: 131 FYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM---IHKGNEFD 187
Query: 245 FVYVINSCAGLQNSILGKS---IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
++ + + L + L + +H I+ L D + +AL++ YAK +NL A F+
Sbjct: 188 STTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFT 247
Query: 302 EISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
+ +++IVSWN ++ + P S+ + G + TFS V+ + + + L
Sbjct: 248 HMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTL 307
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP-ANIIAGIY 415
LH L+I+ GY P A V N I +Y
Sbjct: 308 GESLHGLVIKSGYS-------------------------------PEAHVSVGNSIISMY 336
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA-RIYPDNYTF 474
++ G + +L D++S N ++ A NG ++E + M++ +I PD T
Sbjct: 337 SKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATV 396
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
VS+ S C L G ++HG + E+ S V N +IDMYGKCG + +F T
Sbjct: 397 VSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTT 456
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREM--EFLGFKPDRVALIAVLTACRHGGLVREG 592
R++++W ++ISA NGF +A F+E+ E+ K ++A+LT+C + G
Sbjct: 457 HRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFG 516
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ + + G M + V+++ + L A + TM + W + + GC
Sbjct: 517 KSVHCWLQK-LGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGC 574
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 151/461 (32%), Positives = 236/461 (51%), Gaps = 8/461 (1%)
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINSCAGL 255
K+ +++ +V SWN +I ESEN K L LY RM P+ T+ ++ CA L
Sbjct: 108 KILNNLQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANL 167
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
S +G I +V+K + D+++ + ++ AH F E +++VSWN+LI
Sbjct: 168 VLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLI 227
Query: 316 LGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYE 370
GY + P ++ + +++ +P+E T V+ + + L+L H I G
Sbjct: 228 NGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLN 287
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
++ +LM Y K G + + V +I G Y + G + KL
Sbjct: 288 LKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVG-YAKNGLLDMAGKLFHD 346
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+ ++V+WN +I +C E LELF+ M+ + + PD T + LSACS+L L G
Sbjct: 347 MPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTG 406
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
H IKK + S D + LIDMY KCG++ ++++FNEM RN +TWTA+I L L
Sbjct: 407 MWTHNYIKKHNL-SLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLAL 465
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
G A+ F +M G PD + + VLTAC HGGLV EG + F++M + + P+
Sbjct: 466 YGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPK 525
Query: 611 HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
HY C+V+LL R G L+EAE++I TMP +A++W C
Sbjct: 526 HYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFAC 566
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/530 (20%), Positives = 247/530 (46%), Gaps = 14/530 (2%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGL--YGRHGCLDEVVSVFEDMPRK 104
L +C S + ++ Q+QA ++ GL D F + L+ LD + + ++
Sbjct: 60 LENCKSFSQLK--QIQAQMILTGLIL-DGFASSRLISFCAISESRNLDYCIKILNNLQNP 116
Query: 105 SLVTWNSIVSIFGKHGFVEDCMFLFCE-LVRSEVALTESSFVGVIHGLSNEQDLEFGEQI 163
++ +WN+++ + + + L+ L R+ ++ + +N G +I
Sbjct: 117 NVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMGFEI 176
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
G V+K GFD ++ + N +++M A K+F + +RD+VSWN++I
Sbjct: 177 LGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQP 236
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
+A+ +Y +M + V P++ T + V+++CA L++ LG+ IH + ++ L + + +AL
Sbjct: 237 REAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNAL 296
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNE 342
+D Y KC +LE + F + K +VSW +I+GYA + L ++ +
Sbjct: 297 MDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWN 356
Query: 343 FTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL---AFVTAL 399
++++L+F+ L+L + + + + +++ ++ G + + ++
Sbjct: 357 AMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKH 416
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
N+ V + +Y + G + +++ +++ R + ++W +I A G+ + + F
Sbjct: 417 NLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYF 476
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
M + + PD TF+ +L+AC + G +K +S + ++++ G+
Sbjct: 477 SKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGR 536
Query: 520 CGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
G + + ++ M + + + W AL A G++ +RA K +++
Sbjct: 537 AGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGERAASKLLDLD 586
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP++NVV++N++I + + +AL +F M +P + T LS C L ++
Sbjct: 347 MPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTG 406
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ +K D +GTAL+ +Y + G + + + VF +MPR++ +TW +I+ +
Sbjct: 407 MWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALY 466
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVI----HGLSNEQDLEFGEQIHGLVIKNGFDYE 175
G V D +F F +++ S + E +F+GV+ HG E+ ++ +Q +K+ F+
Sbjct: 467 GNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQ-----MKSRFNLS 521
Query: 176 LLVAN--SLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENF 223
+ +VN+ + + AE++ K + + D + W + A N
Sbjct: 522 PQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNL 572
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 156/515 (30%), Positives = 259/515 (50%), Gaps = 35/515 (6%)
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
T S + +I +N Q L+ QIH I + Y + ++N + A + A ++F
Sbjct: 5 TPKSVLALIETCTNIQQLK---QIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVF 61
Query: 200 KDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNS 258
+ D +N +I A + S+ A+ +Y +M + + ++ T+ +V +CA
Sbjct: 62 NQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAV 121
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
GK +H +++ E D F+ S+L++FY C + A F E K++V WNALI GY
Sbjct: 122 EKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGY 181
Query: 319 ASKSSPTSIF-LLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
A + F + E++++ RPNE T ++ + + + L+L G + Y++
Sbjct: 182 ARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKL-------GRAIHGYMM 234
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
K ++ + + AL +Y + G + KL ++ +
Sbjct: 235 --------KDMVLREGVKLEAAL------------INLYVKCGYLDGARKLFDEIPEKNT 274
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
V WN +I G EV+EL + M + + PD +T +LSAC+++ LG+ +H
Sbjct: 275 VVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRF 334
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
+K I D F+ LIDMY KCG IG++ K+F++M +RNV TW A++S +G A+
Sbjct: 335 AEKKGIW--DVFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAES 392
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
A+E F EM G +PD + +AVL AC H GLV G + F+ M + Y + P ++HY C+V
Sbjct: 393 AIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMV 452
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
DLL R G L+EA ++I M PN ++W L C
Sbjct: 453 DLLGRAGLLQEARELIKMMVVEPNVVVWGALLSAC 487
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 232/485 (47%), Gaps = 40/485 (8%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
F+ T ++ + H CLD VF +N+++ + + ++ ++
Sbjct: 39 FIITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRAC 98
Query: 136 EVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
+ L + ++ V +++ +E G+++HG++++ G++ + + +SL+N Y C I +
Sbjct: 99 QNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGN 158
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAES----ENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
A+++F + + +DVV WN +I A ++FG E+ + V V PN+ T + +I
Sbjct: 159 AQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEM---VEVKEVRPNEGTMMGLIV 215
Query: 251 SCAGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
+C +N LG++IH ++K+ L V + +AL++ Y KC L+GA F EI KN V
Sbjct: 216 ACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTV 275
Query: 310 SWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMG 368
WN+LI GY S + L+ + L +P+ FT S VL + +MG
Sbjct: 276 VWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSAC------------AQMG 323
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
N LG+ + +A+ I D V + +Y + G K+
Sbjct: 324 AFN----LGNWVHRFAEKKGIWD-------------VFIGTALIDMYAKCGFIGAARKVF 366
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
Q+ ++ +WN +++ A +G + +ELF MR + PD+ TF+++L AC+ +
Sbjct: 367 DQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVE 426
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISA 547
G L+ + I ++D+ G+ G + + ++ M + NV+ W AL+SA
Sbjct: 427 NGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSA 486
Query: 548 LGLNG 552
++G
Sbjct: 487 CSIHG 491
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 205/408 (50%), Gaps = 34/408 (8%)
Query: 49 SCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV 107
+C S VE G ++ +++ G + D F+ ++LL Y G + VF++ K +V
Sbjct: 114 ACASQFAVEKGKEVHGVIVRIG-YELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVV 172
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
WN++++ + + G V D +F E+V EV E + +G+I ++L+ G IHG
Sbjct: 173 FWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGY 232
Query: 167 VIKNGFDYE-LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
++K+ E + + +L+N+Y +C + A K+F ++ ++ V WN++I + + +
Sbjct: 233 MMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNE 292
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
+EL M + + P++ T V+++CA + LG +H K + DVF+G+AL+D
Sbjct: 293 VIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGI-WDVFIGTALID 351
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFT 344
YAKC + A F +++ +N+ +WNA++ GYAS + ++I L E+ + G RP+ T
Sbjct: 352 MYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSIT 411
Query: 345 FSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
F VL + H ++ G + ++ LM Y K IP
Sbjct: 412 FLAVLHAC-------AHSGLVENGKQYFD-----LMLQYYK---------------IPPR 444
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGD 451
V + + R G E +L+ + P++V W +++AC+ +G+
Sbjct: 445 VEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGN 492
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 130/253 (51%), Gaps = 4/253 (1%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLL-SC-DSLNPVEGAQ 60
++VV +N++I+ Y+R G V D+ +F M+ + P + T GL+ +C +S N G
Sbjct: 169 KDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRA 228
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ ++K+ + + AL+ LY + G LD +F+++P K+ V WNS++ + + G
Sbjct: 229 IHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIG 288
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + + L E+ S + + GV+ + G +H K G +++ +
Sbjct: 289 SLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGI-WDVFIGT 347
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L++MY +C I +A K+F + R+V +WN I+ A A+EL+ M P
Sbjct: 348 ALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARP 407
Query: 241 NQTTFVYVINSCA 253
+ TF+ V+++CA
Sbjct: 408 DSITFLAVLHACA 420
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 4/171 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+P++N V +NS+I Y + G + + + + M +P +FT G+LS C + G
Sbjct: 269 IPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLG 328
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ K G++ D F+GTAL+ +Y + G + VF+ M +++ TWN+I+S +
Sbjct: 329 NWVHRFAEKKGIW--DVFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYAS 386
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
HG E + LF E+ S +F+ V+H ++ +E G+Q L+++
Sbjct: 387 HGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQ 437
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 165/537 (30%), Positives = 252/537 (46%), Gaps = 65/537 (12%)
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV-- 202
+ + ++ ++L G++IH ++ NGF L SL+NMY +C + A +F D
Sbjct: 41 IASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTH 100
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
EI +V ++N II + + E Y +M + V P++ TF I +C + K
Sbjct: 101 EI-NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---K 156
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
IH + K LE DVF+GSALV+ Y K +E A + F E+ +++V WNA++ GYA
Sbjct: 157 KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIG 216
Query: 323 SPTSIFLLIELLQLGYR--------PNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYE 370
E++ +R P+ FT + VL L +H ++MGY+
Sbjct: 217 Q-------FEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYD 269
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ V SL+ Y K I DAL ++
Sbjct: 270 SGVAVSNSLIDMYGKCKCIEDAL--------------------------------EIFEM 297
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+ DI SWN +++ GD+ L L M A I PD T ++L ACS L L G
Sbjct: 298 MREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHG 357
Query: 491 SSLHGL-----IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
+HG + K D + N +IDMY KCGS+ + +F M++++V +W +I
Sbjct: 358 REIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMI 417
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
G++G+ ALE F M + KPD V + VL+AC H G V +G +M Y V
Sbjct: 418 MGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDV 477
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYDTL 662
P ++HY CV+D+L R G L EA ++ TMP N ++WR L CR+ K+ L
Sbjct: 478 APTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAA---CRLHKHAVL 531
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 218/455 (47%), Gaps = 47/455 (10%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVEGAQLQA 63
NV +FN+IIS + G+ E+ + M N G P +FTF + +C L+ +E ++
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKAC--LDVLEIKKIHG 160
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+ K GL D F+G+AL+ Y + G ++ FE++P + +V WN++V+ + + G E
Sbjct: 161 LLFKFGLEL-DVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFE 219
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ F + V + + GV+ + DL G IHG +K G+D + V+NSL+
Sbjct: 220 MVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLI 279
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
+MY +C I A ++F+ + +D+ SWN+I+ + + L L RM + P+
Sbjct: 280 DMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLV 339
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALEC------DVFVGSALVDFYAKCDNLEGAH 297
T V+ +C+ L + G+ IH +I + L DV + +A++D YAKC ++ AH
Sbjct: 340 TVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAH 399
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
L F +SNK++ SWN +I+GY ++ + + ++ +P+E TF VL
Sbjct: 400 LVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVL------- 452
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIA 412
++ + +G +S F+ + V P +
Sbjct: 453 ------------------------SACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVI 488
Query: 413 GIYNRTGQYNETVKL-LSQLERPDIVSWNIVIAAC 446
+ R GQ +E +L L+ + V W ++AAC
Sbjct: 489 DMLGRAGQLDEAYELALTMPIEANPVVWRALLAAC 523
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 166/325 (51%), Gaps = 11/325 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
+P R+VV +N++++ Y++ G E L F M + P++FT G+LS ++ + G
Sbjct: 197 LPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNG 256
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +K G + + V +L+ +YG+ C+++ + +FE M K + +WNSIVS+ +
Sbjct: 257 RIIHGFAMKMG-YDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQ 315
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI-----KNGFD 173
G + + L ++ + + + V+ S+ L G +IHG +I K+G D
Sbjct: 316 CGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKD 375
Query: 174 Y-ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
++L+ N++++MY +C + A +F+ + +DV SWN +I +ALE++ R
Sbjct: 376 IDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSR 435
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI-KNALECDVFVGSALVDFYAKCD 291
M + P++ TFV V+++C+ G++ ++ K + + + ++D +
Sbjct: 436 MCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAG 495
Query: 292 NLEGAH-LCFSEISNKNIVSWNALI 315
L+ A+ L + N V W AL+
Sbjct: 496 QLDEAYELALTMPIEANPVVWRALL 520
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M +++V S+N +I Y GY +AL MF M +P + TF G+LS C V
Sbjct: 405 MSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQG 464
Query: 60 QLQASVLKNGLFCADAFVG-TALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVS 114
+ +K+ A T ++ + GR G LDE + MP + V W ++++
Sbjct: 465 RNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLA 521
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 248/478 (51%), Gaps = 8/478 (1%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L + I A ++F+ + + WN +I +++ +A+ Y M +F
Sbjct: 734 NLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALF 793
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
N T+ +++ +CA + N + ++HA+V+K + D+FV +AL+ YA L A
Sbjct: 794 GNNLTYPFLLKACARISN-VSCTTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKV 852
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLL 358
F E+S +++VSWN+LI GY + + ++ E +++ + + T V+ +
Sbjct: 853 FDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEW 912
Query: 359 QLHCLIIRMGYENYE----YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+ +I EN Y+ +L+ Y + ++ A + R +V N +
Sbjct: 913 GVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMR-DRNMVSWNAMIMG 971
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y + G KL + D++SW +I++ + G + + + LF+ M ++ PD T
Sbjct: 972 YGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITV 1031
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S+LSAC+ + L +G ++H I+K ++ ++D +V N LIDMY KCG++ + +F EM
Sbjct: 1032 ASVLSACAHIGALDVGEAVHEYIRKYDV-NADIYVGNALIDMYCKCGAVEKGLSVFEEMG 1090
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
R+ ++WT++I+ L +NG A AL F M G +P + VL AC H G+V +G+E
Sbjct: 1091 KRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLE 1150
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
FE M R YG+ PEM HY CVVDLL R G+L A + I MP P+ ++WR L Q
Sbjct: 1151 YFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQ 1208
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 223/490 (45%), Gaps = 72/490 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+P + +N +I +S+ +A+R + M ++ T+ LL +C ++ V
Sbjct: 756 IPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACARISNVSCT 815
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ A VLK G F +D FV AL+ Y L VF++M + LV+WNS++ +G+
Sbjct: 816 TVHARVLKLG-FDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRC 874
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + +F E+ ++V + V V+ + + + + + +N + ++ +
Sbjct: 875 RRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLG 934
Query: 180 NSLVNMYFQCAGI-----------------W--------------SAEKMFKDVEIRDVV 208
N+L++MY + + + W +A K+F D+ RDV+
Sbjct: 935 NTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVI 994
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SW ++I + +++ FGKA+ L+ M V V P++ T V+++CA + +G+++H +
Sbjct: 995 SWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYI 1054
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
K + D++VG+AL+D Y KC +E F E+ ++ VSW ++I G A S S
Sbjct: 1055 RKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSADSAL 1114
Query: 329 LLIEL-LQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE-----YVLGSLMTS 382
L L L+ G RP TF VL L H ++ G E +E Y L M
Sbjct: 1115 NLFSLMLREGVRPTHGTFVGVL-------LACAHAGVVDKGLEYFESMERVYGLTPEMKH 1167
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNI 441
Y G + D L+ R+G + + ++ PD+V W I
Sbjct: 1168 Y---GCVVDLLS----------------------RSGNLGRAYEFIKRMPMDPDVVVWRI 1202
Query: 442 VIAACAHNGD 451
+++A +G+
Sbjct: 1203 LLSASQVHGN 1212
>gi|302788326|ref|XP_002975932.1| hypothetical protein SELMODRAFT_51678 [Selaginella moellendorffii]
gi|300156208|gb|EFJ22837.1| hypothetical protein SELMODRAFT_51678 [Selaginella moellendorffii]
Length = 570
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/569 (27%), Positives = 285/569 (50%), Gaps = 43/569 (7%)
Query: 85 YGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
YG+ G +D S+FE +PRKS + WN ++ + +G E+ ++LF + +F
Sbjct: 1 YGKCGSVDRARSLFESLPRKSSLCWNFVIGAYAGNGRGEESLYLFRRMALEGERPDRHTF 60
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
V V+ +N G IH + +G +++L++ NSLV +Y + + A +F+ +
Sbjct: 61 VRVLGACTNTAQ---GTAIHRHISSSGLEFDLMLQNSLVALYGRYGRVDLARSVFQSIPE 117
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ-TTFVYVINSCAGLQNSILGKS 263
+ +VSWN ++ A A + + +A Y M + PN+ +T V+ +C+ ++ +GK
Sbjct: 118 KSLVSWNAMLTAYARNGHSREAAHAYNEMIFTGIEPNEISTLTTVLGACSSSRDLKIGKM 177
Query: 264 IHAKVIKNALEC-DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
IH++ + + D + A+V+FY KC + A F I+ K++V A+I GYA
Sbjct: 178 IHSRAVCCGFDKEDQVLQVAVVNFYGKCGAVADARRVFDGIAQKSVVVHTAMIGGYAQHG 237
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTS 382
+ + + PN T+S VL + C + G ++ +L S + +
Sbjct: 238 HSLEALEIYHAMNV--PPNRVTYSTVLAA----------CSTLEQGKAIHQRILASKLEN 285
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
T L + A+V +Y + ++ER D+V+WN +
Sbjct: 286 --------------TGLVLETALVK------MYASFDDCASARGVFDRMERRDLVAWNTM 325
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
+ +G KE LEL++ M+ + PD+ T +LL ACS L +L+ G H L+ + ++
Sbjct: 326 LGGYVQSGRGKEALELYEDMK---MDPDSTTLSTLLGACSLLGDLSSGKIFHELLIERKM 382
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT---DRNVITWTALISALGLNGFAQRALE 559
+ +D F+C+ L++MY KCGS+G++ ++F+ + + W +++AL G + ++LE
Sbjct: 383 MQADAFLCSSLVNMYAKCGSVGTAREVFHAFRAGFGASSVLWNTILAALAHTGDSSQSLE 442
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
EME G PD + L AC H GL++ G LF+ + + P ++H+ C+ DLL
Sbjct: 443 LLLEMELEGVTPDSTTFVCALVACNHAGLLQRGKLLFQILVLDHSSRPSLEHFLCMADLL 502
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFL 648
R G + A +++ MPF +A+ W+ L
Sbjct: 503 GRAGRVDFAREVVEGMPFEADAVAWKALL 531
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 150/558 (26%), Positives = 267/558 (47%), Gaps = 52/558 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
+P ++ + +N +I AY+ G E++L +F M G P + TF +L N +G
Sbjct: 17 LPRKSSLCWNFVIGAYAGNGRGEESLYLFRRMALEGERPDRHTFVRVLGA-CTNTAQGTA 75
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ + +GL D + +L+ LYGR+G +D SVF+ +P KSLV+WN++++ + ++G
Sbjct: 76 IHRHISSSGLEF-DLMLQNSLVALYGRYGRVDLARSVFQSIPEKSLVSWNAMLTAYARNG 134
Query: 121 FVEDCMFLFCELVRSEVALTE-SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + E++ + + E S+ V+ S+ +DL+ G+ IH + GFD E V
Sbjct: 135 HSREAAHAYNEMIFTGIEPNEISTLTTVLGACSSSRDLKIGKMIHSRAVCCGFDKEDQVL 194
Query: 180 N-SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++VN Y +C + A ++F + + VV +IG A+ + +ALE+Y M+V
Sbjct: 195 QVAVVNFYGKCGAVADARRVFDGIAQKSVVVHTAMIGGYAQHGHSLEALEIYHAMNVP-- 252
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE-CDVFVGSALVDFYAKCDNLEGAH 297
PN+ T+ V+ +C+ L+ GK+IH +++ + LE + + +ALV YA D+ A
Sbjct: 253 -PNRVTYSTVLAACSTLEQ---GKAIHQRILASKLENTGLVLETALVKMYASFDDCASAR 308
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-----S 352
F + +++V+WN ++ GY L E +++ P+ T S +L +
Sbjct: 309 GVFDRMERRDLVAWNTMLGGYVQSGRGKEALELYEDMKMD--PDSTTLSTLLGACSLLGD 366
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L+ + LI R + ++ SL+ YAK G + A A RA A+
Sbjct: 367 LSSGKIFHELLIERKMMQADAFLCSSLVNMYAKCGSVGTAREVFHAF---RAGFGAS--- 420
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
V WN ++AA AH GD + LEL M + PD+
Sbjct: 421 -----------------------SVLWNTILAALAHTGDSSQSLELLLEMELEGVTPDST 457
Query: 473 TFVSLLSACSKLCNLALGSSLHGL--IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TFV L AC+ L G L + + + S + F+C + D+ G+ G + + ++
Sbjct: 458 TFVCALVACNHAGLLQRGKLLFQILVLDHSSRPSLEHFLC--MADLLGRAGRVDFAREVV 515
Query: 531 NEMT-DRNVITWTALISA 547
M + + + W AL+ +
Sbjct: 516 EGMPFEADAVAWKALLGS 533
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 36/269 (13%)
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y + G + L L R + WN VI A A NG +E L LF+ M PD +TF
Sbjct: 1 YGKCGSVDRARSLFESLPRKSSLCWNFVIGAYAGNGRGEESLYLFRRMALEGERPDRHTF 60
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
V +L AC+ N A G+++H I + + D + N L+ +YG+ G + + +F +
Sbjct: 61 VRVLGACT---NTAQGTAIHRHISSSGL-EFDLMLQNSLVALYGRYGRVDLARSVFQSIP 116
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA-LIAVLTACRHG------- 586
++++++W A+++A NG ++ A + EM F G +P+ ++ L VL AC
Sbjct: 117 EKSLVSWNAMLTAYARNGHSREAAHAYNEMIFTGIEPNEISTLTTVLGACSSSRDLKIGK 176
Query: 587 ---------GLVREGMELFERMNRSYG---------------VEPEMDHYHCVVDLLVRY 622
G +E L + YG + + + ++ ++
Sbjct: 177 MIHSRAVCCGFDKEDQVLQVAVVNFYGKCGAVADARRVFDGIAQKSVVVHTAMIGGYAQH 236
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEGC 651
GH EA +I M PPN + + T L C
Sbjct: 237 GHSLEALEIYHAMNVPPNRVTYSTVLAAC 265
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 217/419 (51%), Gaps = 12/419 (2%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN--LEGAHL 298
N ++++ C+ ++ + IH +++K L D S L+ F A ++ L A
Sbjct: 17 NAAQTLHLLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYART 73
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVLRSSLAFQL 357
F I N WN +I GY++ P LL + P N +TF +L++ +
Sbjct: 74 VFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSA 133
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L Q+H II+MG+ + Y SL+ Y+KSG I A ++ R V N +
Sbjct: 134 LEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVD-QRDTVSWNSMID 192
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
Y + G+ ++ + + +I+SW +I+ C G KE L LF M+ A I DN
Sbjct: 193 GYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVA 252
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
VS L AC+ L L G +H IKK EI C +LIDMY KCG + ++++F +M
Sbjct: 253 LVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGC-VLIDMYAKCGDLEEAIEVFRKM 311
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++ V WTA+IS ++G + ALE F +M+ G +P+++ +LTAC H GLV E
Sbjct: 312 EEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAK 371
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
LFE M R +G +P ++HY C+VDLL R G LKEAE++I MP PNA IW L C
Sbjct: 372 LLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACH 430
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 183/446 (41%), Gaps = 75/446 (16%)
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYG--RHGCLDEVVSVFEDMPRKSLVTWNS 111
N E Q+ +LK GL D + LL G L +VF+ + R + WN+
Sbjct: 30 NMEELRQIHGQMLKTGLIL-DEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNT 88
Query: 112 IVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG 171
++ + E+ + L+ ++ V +F ++ S+ LE +QIH +IK G
Sbjct: 89 MIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMG 148
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF-------- 223
F E+ NSL+N+Y + I SA +F V+ RD VSWN++I +
Sbjct: 149 FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFN 208
Query: 224 --------------------GK---ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
GK AL L+ RM + + V + +CA L
Sbjct: 209 HMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQ 268
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA- 319
GK IHA + K+ +E D +G L+D YAKC +LE A F ++ K + W A+I GYA
Sbjct: 269 GKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAI 328
Query: 320 SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
++ +++ G PN+ TF+ +L
Sbjct: 329 HGRGREALEWFMKMQTAGVEPNQMTFTGIL------------------------------ 358
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RP 434
T+ + +GL+ +A ++ P+ + + R G E +L+ + +P
Sbjct: 359 -TACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKP 417
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFK 460
+ W ++ AC +G+ LEL K
Sbjct: 418 NAAIWGALLNACHIHGN----LELGK 439
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 198/431 (45%), Gaps = 29/431 (6%)
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS----- 194
+ES+ +H L ++E QIHG ++K G + + A+ L+ CA S
Sbjct: 14 SESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAF---CASPNSGSLAY 70
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A +F + + WNT+I + S+ +AL LY M V N TF +++ +C+
Sbjct: 71 ARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSS 130
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
+ + IHA +IK +++ ++L++ Y+K +++ A L F ++ ++ VSWN++
Sbjct: 131 MSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSM 190
Query: 315 ILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYE 370
I GY + I + E+ N +++ ++ + + L L + G +
Sbjct: 191 IDGY---TKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIK 247
Query: 371 NYEYVLGSLMTSYAKSGLISDAL---AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
L S + + A G++ A++ I + ++ +Y + G E +++
Sbjct: 248 LDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEV 307
Query: 428 LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNL 487
++E + W +I+ A +G +E LE F M+ A + P+ TF +L+ACS +
Sbjct: 308 FRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACS---HA 364
Query: 488 ALGSSLHGLIKKTEII-----SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITW 541
L L + E I S + + C ++D+ G+ G + + ++ M + N W
Sbjct: 365 GLVHEAKLLFESMERIHGFKPSIEHYGC--MVDLLGRAGLLKEAEELIENMPVKPNAAIW 422
Query: 542 TALISALGLNG 552
AL++A ++G
Sbjct: 423 GALLNACHIHG 433
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 134/286 (46%), Gaps = 36/286 (12%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ-LQ 62
N +N++I YS E+AL ++ +M+ +TF LL +C S++ +E Q +
Sbjct: 82 NTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIH 141
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHG-------CLDEV--------------------- 94
A ++K G F ++ + +LL +Y + G D+V
Sbjct: 142 AHIIKMG-FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEI 200
Query: 95 ---VSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
+F MP +++++W S++S G ++ + LF + + + L + V +
Sbjct: 201 EMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQAC 260
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
++ L+ G+ IH + K+ + + ++ L++MY +C + A ++F+ +E + V W
Sbjct: 261 ADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWT 320
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC--AGL 255
+I A +ALE +++M V PNQ TF ++ +C AGL
Sbjct: 321 AMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGL 366
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 105/225 (46%), Gaps = 15/225 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEGA 59
MP+RN++S+ S+IS G ++AL +F M G + L +C L ++
Sbjct: 210 MPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQG 269
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + +K D +G L+ +Y + G L+E + VF M K + W +++S + H
Sbjct: 270 KWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIH 329
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVI-----HGLSNEQDLEFG--EQIHGLVIKNGF 172
G + + F ++ + V + +F G++ GL +E L F E+IH GF
Sbjct: 330 GRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIH------GF 383
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
+ +V++ + + AE++ +++ ++ + W ++ A
Sbjct: 384 KPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNA 428
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 175/619 (28%), Positives = 301/619 (48%), Gaps = 51/619 (8%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
QL + LK GL D+FV T L LY R+ L +FE+ P K++ WN+++ +
Sbjct: 22 QLHSQCLKVGL-AHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLE 80
Query: 120 GFVEDCMFLFCELVRSEVALTES-----SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
G + + LF ++ + A+TE + + S Q LE G+ IHG + K D
Sbjct: 81 GKWVETLSLFHQM--NADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDN 138
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ V ++L+ +Y +C + A K+F + +DVV W +II ++ + AL + RM
Sbjct: 139 DMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMV 198
Query: 235 V-DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
V + V P+ T V ++CA L + LG+S+H V + + + + +++++ Y K ++
Sbjct: 199 VLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSI 258
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSS 352
A F E+ K+I+SW++++ YA + T+ L E++ N T LR+
Sbjct: 259 RSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRAC 318
Query: 353 LAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ L+ +H L + G+E V +LM Y K P
Sbjct: 319 ASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMK------------------CFSPK 360
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N I L +++ + D+VSW ++ + A G + L +F M +
Sbjct: 361 NAI--------------DLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTR 406
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD V +L+A S+L + LH + K+ ++ F+ LI++Y KC SI ++ K
Sbjct: 407 PDAIALVKILAASSELGIVQQALCLHAFVSKSG-FDNNEFIGASLIELYAKCSSIDNANK 465
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREME-FLGFKPDRVALIAVLTACRHGG 587
+F M ++V+TW+++I+A G +G + AL+ F +M KP+ V +++L+AC H G
Sbjct: 466 VFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAG 525
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
L+ EG+++F M Y + P +HY +VDLL R G L +A +I MP +W
Sbjct: 526 LIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGAL 585
Query: 648 LEGC---QRCRIAKYDTLN 663
L C Q +I + LN
Sbjct: 586 LGACRIHQNIKIGELAALN 604
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 150/558 (26%), Positives = 267/558 (47%), Gaps = 44/558 (7%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGF---EPTQFTFG-GLLSCDSLNPVE 57
P + V +N+++ +Y G + L +F M P +T L SC L +E
Sbjct: 63 PCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLE 122
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
++ LK D FVG+AL+ LY + G +++ V VF + P++ +V W SI++ +
Sbjct: 123 LGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYE 182
Query: 118 KHGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G E + F +V +V+ + V + D G +HG V + GFD +L
Sbjct: 183 QNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKL 242
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ANS++N+Y + I SA +F+++ +D++SW++++ A++ AL L+ M
Sbjct: 243 CLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDK 302
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ N+ T + + +CA N GK IH + E D+ V +AL+D Y KC + + A
Sbjct: 303 RIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNA 362
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F+ + K++VSW L GYA + S+ + +L G RP+ +L +S
Sbjct: 363 IDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSEL 422
Query: 356 QLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
++Q LH + + G++N E++ SL+ YAK I +A
Sbjct: 423 GIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNA------------------- 463
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPD 470
K+ + R D+V+W+ +IAA +G +E L+LF M + + P+
Sbjct: 464 -------------NKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPN 510
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ TFVS+LSACS + G + ++ + +T +++D+ G+ G + ++ +
Sbjct: 511 DVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMI 570
Query: 531 NEMT-DRNVITWTALISA 547
NEM W AL+ A
Sbjct: 571 NEMPMQAGPHVWGALLGA 588
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 99/180 (55%), Gaps = 7/180 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVEGA 59
MP ++VVS+ + S Y+ G +L +F M++ G P +L+ S L V+ A
Sbjct: 369 MPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQA 428
Query: 60 Q-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L A V K+G F + F+G +L+ LY + +D VF+ M RK +VTW+SI++ +G
Sbjct: 429 LCLHAFVSKSG-FDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGF 487
Query: 119 HGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
HG E+ + LF ++ S+V + +FV ++ S+ +E G ++ +++ +Y+L+
Sbjct: 488 HGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVN---EYQLM 544
>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 783
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 163/587 (27%), Positives = 278/587 (47%), Gaps = 75/587 (12%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D F ++ Y L + +F P K+ ++WN+++S + K G + LF E+
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
+ E + V+ ++ L GEQIHG IK GFD ++ V N L+ MY QC I
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRIS 177
Query: 194 SAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
AE +F+ +E ++ V+W +++ +++ KA+E + + + NQ TF V+ +C
Sbjct: 178 EAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTAC 237
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
A + +G +H ++K+ + +++V SAL+D YAKC +E A + ++VSWN
Sbjct: 238 ASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWN 297
Query: 313 ALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQLLQL----HCLIIR 366
++I+G + ++ + + + + ++FT +L +L+ +++ HCLI++
Sbjct: 298 SMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVK 357
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
GY Y+ V +L+ YAK G++ AL K
Sbjct: 358 TGYATYKLVNNALVDMYAKRGIMDSAL--------------------------------K 385
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+ + D++SW ++ HNG Y E L+LF MR I PD S+LSA ++L
Sbjct: 386 VFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTL 445
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L G +HG K+ SS + V N L+ MY KCGS+ + IFN M R++ITWT LI
Sbjct: 446 LEFGQQVHGNYIKSGFPSSLS-VNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIV 504
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
G+A+ GL+ + F+ M YG+
Sbjct: 505 -----GYAK------------------------------NGLLEDAQRYFDSMRTVYGIT 529
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
P +HY C++DL R G + E+++ M P+A +W+ L ++
Sbjct: 530 PGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRK 576
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 144/552 (26%), Positives = 256/552 (46%), Gaps = 23/552 (4%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLN-PVEGA 59
P +N +S+N++IS Y + G +A +F M + G +P ++T G +L C SL + G
Sbjct: 86 PVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGE 145
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGK 118
Q+ +K G F D V LL +Y + + E +FE M K+ VTW S+++ + +
Sbjct: 146 QIHGHTIKTG-FDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF + F +L R + +F V+ ++ G Q+H ++K+GF + V
Sbjct: 205 NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYV 264
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++L++MY +C + SA + + +E+ DVVSWN++I G+AL ++ RM +
Sbjct: 265 QSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDM 324
Query: 239 FPNQTTFVYVINSCAGLQNS--ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ T ++N C L + + S H ++K V +ALVD YAK ++ A
Sbjct: 325 KIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSA 383
Query: 297 HLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F + K+++SW AL+ G S ++ L + G P++ + VL +S
Sbjct: 384 LKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAEL 443
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
LL Q+H I+ G+ + V SL+T Y K G + DA ++ I + +I
Sbjct: 444 TLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLI 503
Query: 412 AGIYNRTGQYNETVKLLSQLE-----RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
G Y + G + + + P + +I +GD+ +V +L M
Sbjct: 504 VG-YAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQM---E 559
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
+ PD + ++L+A K N+ G + + E ++ +V L +MY G +
Sbjct: 560 VEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYV--QLSNMYSAAGRQDEA 617
Query: 527 VKIFNEMTDRNV 538
+ M RN+
Sbjct: 618 ANVRRLMKSRNI 629
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 160/394 (40%), Gaps = 62/394 (15%)
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIE 332
E D F + ++ Y+ L A F KN +SWNALI GY S F L E
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 333 LLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
+ G +PNE+T VLR + LL Q+H I+ G++ V+ L+ YA+
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR 175
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
IS+A + G+ N V+W ++ +
Sbjct: 176 ISEAEYLFETME------------------GEKNN-------------VTWTSMLTGYSQ 204
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
NG + +E F+ +R + YTF S+L+AC+ + +G +H I K+ ++ +
Sbjct: 205 NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSG-FKTNIY 263
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V + LIDMY KC + S+ + M +V++W ++I G AL F M
Sbjct: 264 VQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERD 323
Query: 569 FKPDRVALIAVL------------TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
K D + ++L + H +V+ G ++ +N + +V
Sbjct: 324 MKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVN------------NALV 371
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
D+ + G + A K+ M + + W + G
Sbjct: 372 DMYAKRGIMDSALKVFEGM-IEKDVISWTALVTG 404
>gi|357162206|ref|XP_003579338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g20730-like [Brachypodium distachyon]
Length = 558
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 266/528 (50%), Gaps = 53/528 (10%)
Query: 145 VGVIHGLSNEQDLEF--------------GEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
+G++ G + D F G +H +I + +L ++ LV Y +
Sbjct: 1 MGLVRGAATSADPAFYYSLLQSCMSCFRRGRSVHHQIIASAAPPDLHMSTKLVIFYAKHG 60
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
+ +A K+F + R VVSW ++ + + +AL+L+ M V PNQ T+ V +
Sbjct: 61 DVAAARKVFDGMPHRSVVSWTAMVSGYSRNGQTREALDLFTLMLASGVRPNQFTYGSVAS 120
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+CAG G+ +HA V K DVFV SAL+D + +C ++ A F+E+ K++V+
Sbjct: 121 ACAGAGCVRSGEQVHACVAKGRFVGDVFVQSALMDMHLRCGSVVDAMQLFAEMERKDVVA 180
Query: 311 WNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLII 365
WNAL+ G ++ ++ LL +L+ P+ FTF L++ A +L +H II
Sbjct: 181 WNALLRGLVERAQYGDALGLLPSMLRGAMLPDHFTFGSALKACGAVSVLANVELIHTCII 240
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
++GY + V+GS++ +YAK R + A +I Y+
Sbjct: 241 KLGYWGEKVVIGSIIDAYAKC----------------RGLSSARLI---------YDSIC 275
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKE-VLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+ PD+VS +I+ + + ++ E +ELF + + D SLL C+ +
Sbjct: 276 E-------PDLVSSTALISGYSMDRNHSEDAMELFCKIHRKGLRIDGVLLSSLLGLCANV 328
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
+L G+ +H + K + ++ D + N ++DMY K G + + F+EM RNV++WT+L
Sbjct: 329 ASLRFGTQIHAYMCKRQPMT-DVALDNAVVDMYAKAGEFADARRAFDEMPYRNVVSWTSL 387
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I+A G NGF + A+ F M G KP+ V +++L+AC H GL +GME F M YG
Sbjct: 388 ITACGKNGFGEDAVSLFDRMVEDGVKPNDVTFLSLLSACGHSGLTSKGMEYFTSMMSKYG 447
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++P +HY +DLL R G LK+A K++ + PN+ ++ L C+
Sbjct: 448 IDPRAEHYSSAIDLLARGGQLKDAWKLVQNIDIEPNSSMFGAMLGACK 495
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 195/410 (47%), Gaps = 30/410 (7%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D + T L+ Y +HG + VF+ MP +S+V+W ++VS + ++G + + LF ++
Sbjct: 45 DLHMSTKLVIFYAKHGDVAAARKVFDGMPHRSVVSWTAMVSGYSRNGQTREALDLFTLML 104
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
S V + ++ V + + GEQ+H V K F ++ V ++L++M+ +C +
Sbjct: 105 ASGVRPNQFTYGSVASACAGAGCVRSGEQVHACVAKGRFVGDVFVQSALMDMHLRCGSVV 164
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
A ++F ++E +DVV+WN ++ L E +G AL L M + P+ TF + +C
Sbjct: 165 DAMQLFAEMERKDVVAWNALLRGLVERAQYGDALGLLPSMLRGAMLPDHFTFGSALKACG 224
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+ + IH +IK + V +++D YAKC L A L + I ++VS A
Sbjct: 225 AVSVLANVELIHTCIIKLGYWGEKVVIGSIIDAYAKCRGLSSARLIYDSICEPDLVSSTA 284
Query: 314 LILGYA--SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYEN 371
LI GY+ S ++ L ++ + G R + S +L L R G +
Sbjct: 285 LISGYSMDRNHSEDAMELFCKIHRKGLRIDGVLLSSLLGLCANVASL-------RFGTQI 337
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
+ Y+ K ++D V N + +Y + G++ + + ++
Sbjct: 338 HAYM--------CKRQPMTD-------------VALDNAVVDMYAKAGEFADARRAFDEM 376
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
++VSW +I AC NG ++ + LF M + P++ TF+SLLSAC
Sbjct: 377 PYRNVVSWTSLITACGKNGFGEDAVSLFDRMVEDGVKPNDVTFLSLLSAC 426
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 212/460 (46%), Gaps = 43/460 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+VVS+ +++S YSR G +AL +F M+ G P QFT+G + S C V G
Sbjct: 72 MPHRSVVSWTAMVSGYSRNGQTREALDLFTLMLASGVRPNQFTYGSVASACAGAGCVRSG 131
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A V K G F D FV +AL+ ++ R G + + + +F +M RK +V WN+++ +
Sbjct: 132 EQVHACVAK-GRFVGDVFVQSALMDMHLRCGSVVDAMQLFAEMERKDVVAWNALLRGLVE 190
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
D + L ++R + +F + L E IH +IK G+ E +V
Sbjct: 191 RAQYGDALGLLPSMLRGAMLPDHFTFGSALKACGAVSVLANVELIHTCIIKLGYWGEKVV 250
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-ALELYLRMSVDI 237
S+++ Y +C G+ SA ++ + D+VS +I + N + A+EL+ ++
Sbjct: 251 IGSIIDAYAKCRGLSSARLIYDSICEPDLVSSTALISGYSMDRNHSEDAMELFCKIHRKG 310
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ + ++ CA + + G IHA + K DV + +A+VD YAK A
Sbjct: 311 LRIDGVLLSSLLGLCANVASLRFGTQIHAYMCKRQPMTDVALDNAVVDMYAKAGEFADAR 370
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F E+ +N+VSW +LI ++ L +++ G +PN+ TF
Sbjct: 371 RAFDEMPYRNVVSWTSLITACGKNGFGEDAVSLFDRMVEDGVKPNDVTFL---------- 420
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-----PRAVVPANII 411
SL+++ SGL S + + T++ PRA ++ I
Sbjct: 421 ---------------------SLLSACGHSGLTSKGMEYFTSMMSKYGIDPRAEHYSSAI 459
Query: 412 AGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNG 450
+ R GQ + KL+ ++ P+ + ++ AC +G
Sbjct: 460 -DLLARGGQLKDAWKLVQNIDIEPNSSMFGAMLGACKTHG 498
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 182/690 (26%), Positives = 318/690 (46%), Gaps = 57/690 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP R+++++NS+ISAY G +EDA +F + G G
Sbjct: 59 MPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSGYARL-------GRV 111
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L A + +G+ + A++ Y ++G + +F+ MP + + +WNS+V+ +
Sbjct: 112 LDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSR 171
Query: 121 FVEDCMFLFCEL---------------VRSE----------------VALTESSFVGVIH 149
+ D LF ++ VR E + +S+F V+
Sbjct: 172 QMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLS 231
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS-AEKMFKDVEIRDVV 208
++ QDL E + LV+K GF+ ++++ S++N+Y + A A K F + R+
Sbjct: 232 AVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEY 291
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
+W+T+I AL+ A+ +Y R V + P+QT + + C G+ A++
Sbjct: 292 TWSTMIAALSHGGRIDAAIAVYGRDPVKSI-PSQTALLTGLARC--------GRITEARI 342
Query: 269 IKNALECDVFVG-SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTS 326
+ + + V +A++ Y + ++ A F + +N +SW +I GYA S +
Sbjct: 343 LFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEA 402
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTS 382
+ LL L + G P+ + + + L Q+H L ++ G + YV +L++
Sbjct: 403 LDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISM 462
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
Y K + + + V + IA + + + + + D+VSW +
Sbjct: 463 YGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALV-QNNMLEDARHIFDNMLSRDVVSWTTI 521
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
I+A A E +E FK M P++ LLS C L + LG +H + K
Sbjct: 522 ISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIK-HG 580
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
+ S+ V N L+ MY KCG S K+F+ M +R++ TW I+ +G + A++ +
Sbjct: 581 MDSELIVANALMSMYFKCGC-ADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYE 639
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
ME +G P+ V + +L AC H GLV EG + F+ M+R YG+ P ++HY C+VDLL R
Sbjct: 640 HMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRT 699
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G ++ AEK I MP P+ +IW L C+
Sbjct: 700 GDVQGAEKFIYDMPIEPDTVIWSALLGACK 729
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 146/636 (22%), Positives = 267/636 (41%), Gaps = 96/636 (15%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL- 132
D +A + R G L E VF+ MP + ++ WNS++S + G +ED LF +
Sbjct: 32 DKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAIS 91
Query: 133 ---VRS-EVALTESSFVG-------VIHGLSNEQDLEFGEQIHGLVIKNG--------FD 173
VR+ + L+ + +G V G+ + + + ++NG FD
Sbjct: 92 GGNVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMV-SCYVQNGDITMARRLFD 150
Query: 174 ----YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
++ NS+V Y + A +FK + R++V+W +I E GK ++
Sbjct: 151 AMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDI 210
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
+ M + P+Q+ F V+++ GLQ+ + + + V+K E DV +G+++++ Y +
Sbjct: 211 FRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTR 270
Query: 290 -CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
L+ A F + +N +W+ +I A+ S I I + G P + S
Sbjct: 271 DASALDIAIKFFDGMVERNEYTWSTMI---AALSHGGRIDAAIAV--YGRDPVKSIPSQT 325
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+L+T A+ G I++A + P V
Sbjct: 326 -----------------------------ALLTGLARCGRITEARILFEQIPDPIVVSWN 356
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+I G Y + G +E +L ++ + +SW +IA A NG +E L+L + + +
Sbjct: 357 AMITG-YMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGML 415
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P + S ACS + L G +H L K +++VCN LI MYGKC ++ +
Sbjct: 416 PSLSSLTSSFLACSHIGALETGRQVHSLAVKAG-CQFNSYVCNALISMYGKCRNMEYVRQ 474
Query: 529 IFNEMT-------------------------------DRNVITWTALISALGLNGFAQRA 557
+FN M R+V++WT +ISA A
Sbjct: 475 VFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEA 534
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
+E F+ M KP+ L +L+ C G + G ++ + +G++ E+ + ++
Sbjct: 535 VEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQI-HTVAIKHGMDSELIVANALMS 593
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ + G ++ K+ +M + W TF+ GC +
Sbjct: 594 MYFKCG-CADSHKVFDSME-ERDIFTWNTFITGCAQ 627
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 134/620 (21%), Positives = 242/620 (39%), Gaps = 101/620 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP RN+V++ +IS Y R +F M + G P Q F +LS V G Q
Sbjct: 183 MPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSA-----VTGLQ 237
Query: 61 -------LQASVLKNGLFCADAFVGTALLGLYGRHG-CLDEVVSVFEDMPRKSLVTWNSI 112
L+ VLK G F +D +GT++L +Y R LD + F+ M ++ TW+++
Sbjct: 238 DLGVLEVLRPLVLKTG-FESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTM 296
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH-GLSNEQDLEFGEQIHGLVIKNG 171
++ G ++ + ++ + + G+ G E + F EQI ++
Sbjct: 297 IAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILF-EQIPDPIV--- 352
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
+ N+++ Y Q + A+++F + R+ +SW +I A++ +AL+L
Sbjct: 353 -----VSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQ 407
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
+ + + P+ ++ +C+ + G+ +H+ +K + + +V +AL+ Y KC
Sbjct: 408 ALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCR 467
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKS------------------SPTSIFLLIEL 333
N+E F+ + K+ VSWN+ I + S T+I
Sbjct: 468 NMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQ 527
Query: 334 LQLGYRPNEF----TFSHVLRSSLAFQLL--------------QLHCLIIRMGYENYEYV 375
+ G EF H +S +L Q+H + I+ G ++ V
Sbjct: 528 AERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIV 587
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER-- 433
+LM+ Y K G F + R + N + G E +K+ +E
Sbjct: 588 ANALMSMYFKCGCADSHKVFDSMEE--RDIFTWNTFITGCAQHGLGREAIKMYEHMESVG 645
Query: 434 --PDIVSWNIVIAACAHNGDYKEVLELFKYMRA--------------------------- 464
P+ V++ ++ AC+H G E + FK M
Sbjct: 646 VLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGA 705
Query: 465 ------ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYG 518
I PD + +LL AC N +G + TE ++ +V ML ++Y
Sbjct: 706 EKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYV--MLSNIYS 763
Query: 519 KCGSIGSSVKIFNEMTDRNV 538
G ++ M R V
Sbjct: 764 SLGMWVEVAELRKIMKQRGV 783
>gi|255541017|ref|XP_002511573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550688|gb|EEF52175.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 954
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 179/610 (29%), Positives = 309/610 (50%), Gaps = 42/610 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
NVV +NSIIS + G AL +F M R P FTF +L+ C SL VE G +
Sbjct: 215 ENVVCWNSIISGAVKSGEYWIALDIFYQMSRRFVVPNSFTFSSILTACASLEEVELGKGI 274
Query: 62 QASVLKNGLFCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
Q V+K CA D FVGTA++ +Y + G + + V F MP +++V+W +IVS F K
Sbjct: 275 QGWVIK---CCAKDIFVGTAIVNMYAKCGDIVDAVKEFSRMPVRNVVSWTAIVSGFIKRD 331
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ F E+ + + + + VI + ++ QIH ++K G+ + +V
Sbjct: 332 DSISALKFFKEMRKMKEETNKFTVTTVISACAKPHFIKEAIQIHCWILKTGYYLDPVVGA 391
Query: 181 SLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+L+NMY + I S+E +F+++E +++ W +I + A++++ A++L L++ +
Sbjct: 392 ALINMYAKLHAISSSEMVFREMEGVKNPGIWTIMISSFAKNQDSQSAIDLLLKLLQQGLR 451
Query: 240 PNQTTFVYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ + ++S + +S+ LG+ IH ++K D+ VGS+L Y+KC ++ ++
Sbjct: 452 PDK----FCLSSVLSVIDSLYLGREIHCYILKTGFVLDLSVGSSLFTMYSKCGSIGDSYK 507
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F +I K+ +SW ++I G+ F LL ++L +P++ TFS +L ++ +
Sbjct: 508 VFEQIPVKDNISWTSMISGFTEHGHAYQAFELLRKMLTERSKPDQTTFSAILSAASSIHS 567
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
LQ G + YA + D A+V ++ +Y++
Sbjct: 568 LQK----------------GKEIHGYAYRARLGD-----------EALVGGALV-NMYSK 599
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G K+ L D VS + +++ A NG +E L LF M + D++ S+
Sbjct: 600 CGALESARKMFDLLAVKDQVSCSSLVSGYAQNGWLEEALLLFHEMLISNFTIDSFAVSSV 659
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L A + L L G+ LH + K + SD V + L+ +Y KCGSI K FN++ D +
Sbjct: 660 LGAIAGLNRLDFGTQLHAHLVKLGL-DSDVSVGSSLVTVYSKCGSIEDCWKAFNQIDDAD 718
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+I+WT +I++ +G AL+ + +M G +PD V + VL+AC H LV EG F
Sbjct: 719 LISWTTMIASCAQHGKGVEALKIYEQMRREGIRPDSVTFVGVLSACSHANLVEEGYFHFN 778
Query: 598 RMNRSYGVEP 607
M + +G+EP
Sbjct: 779 SMTKDFGLEP 788
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 184/658 (27%), Positives = 321/658 (48%), Gaps = 42/658 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSL-NPVEG 58
+P++NV+S+N IIS Y+R ED+ R F M GF+P T+G +LS C +L P G
Sbjct: 111 IPNKNVISWNVIISGYNRNSLFEDSWRFFSMMHFSGFDPNDITYGCVLSACAALETPNLG 170
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + KNG + ++ V ++ L R+G + + VF D+ +++V WNSI+S K
Sbjct: 171 EQVYSLATKNGFY-SNGHVRAGMIDLLARNGRFGDALRVFYDVSCENVVCWNSIISGAVK 229
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + +F ++ R V +F ++ ++ +++E G+ I G VIK ++ V
Sbjct: 230 SGEYWIALDIFYQMSRRFVVPNSFTFSSILTACASLEEVELGKGIQGWVIKCCAK-DIFV 288
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++VNMY +C I A K F + +R+VVSW I+ + ++ AL+ + M
Sbjct: 289 GTAIVNMYAKCGDIVDAVKEFSRMPVRNVVSWTAIVSGFIKRDDSISALKFFKEMRKMKE 348
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N+ T VI++CA IH ++K D VG+AL++ YAK + + +
Sbjct: 349 ETNKFTVTTVISACAKPHFIKEAIQIHCWILKTGYYLDPVVGAALINMYAKLHAISSSEM 408
Query: 299 CFSEISN-KNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F E+ KN W +I +A ++ S ++I LL++LLQ G RP++F S VL +
Sbjct: 409 VFREMEGVKNPGIWTIMISSFAKNQDSQSAIDLLLKLLQQGLRPDKFCLSSVLSVIDSLY 468
Query: 357 L-LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L ++HC I++ G+ V SL T Y+K G I D
Sbjct: 469 LGREIHCYILKTGFVLDLSVGSSLFTMYSKCGSIGD------------------------ 504
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ K+ Q+ D +SW +I+ +G + EL + M R PD TF
Sbjct: 505 --------SYKVFEQIPVKDNISWTSMISGFTEHGHAYQAFELLRKMLTERSKPDQTTFS 556
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
++LSA S + +L G +HG + + + V L++MY KCG++ S+ K+F+ +
Sbjct: 557 AILSAASSIHSLQKGKEIHGYAYRAR-LGDEALVGGALVNMYSKCGALESARKMFDLLAV 615
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
++ ++ ++L+S NG+ + AL F EM F D A+ +VL A + G +L
Sbjct: 616 KDQVSCSSLVSGYAQNGWLEEALLLFHEMLISNFTIDSFAVSSVLGAIAGLNRLDFGTQL 675
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ + G++ ++ +V + + G +++ K + + + W T + C +
Sbjct: 676 HAHLVK-LGLDSDVSVGSSLVTVYSKCGSIEDCWKAFNQID-DADLISWTTMIASCAQ 731
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 154/544 (28%), Positives = 269/544 (49%), Gaps = 41/544 (7%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
E + ++K LF ++ V +LL Y + G L + VF+ +P K++++WN I+S +
Sbjct: 67 ETKVIHTHLIKTALFNSNTVVANSLLDWYCKSGALFYALKVFDTIPNKNVISWNVIISGY 126
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ ED F + S + ++ V+ + + GEQ++ L KNGF
Sbjct: 127 NRNSLFEDSWRFFSMMHFSGFDPNDITYGCVLSACAALETPNLGEQVYSLATKNGFYSNG 186
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V ++++ + A ++F DV +VV WN+II +S + AL+++ +MS
Sbjct: 187 HVRAGMIDLLARNGRFGDALRVFYDVSCENVVCWNSIISGAVKSGEYWIALDIFYQMSRR 246
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN TF ++ +CA L+ LGK I VIK + D+FVG+A+V+ YAKC ++ A
Sbjct: 247 FVVPNSFTFSSILTACASLEEVELGKGIQGWVIKCCAK-DIFVGTAIVNMYAKCGDIVDA 305
Query: 297 HLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVL----RS 351
FS + +N+VSW A++ G+ + S +++ E+ ++ N+FT + V+ +
Sbjct: 306 VKEFSRMPVRNVVSWTAIVSGFIKRDDSISALKFFKEMRKMKEETNKFTVTTVISACAKP 365
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ +Q+HC I++ GY V +L+ YAK IS +
Sbjct: 366 HFIKEAIQIHCWILKTGYYLDPVVGAALINMYAKLHAISSS------------------- 406
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+ + ++ P I W I+I++ A N D + ++L + + PD
Sbjct: 407 ----------EMVFREMEGVKNPGI--WTIMISSFAKNQDSQSAIDLLLKLLQQGLRPDK 454
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ S+LS + +L LG +H I KT + D V + L MY KCGSIG S K+F
Sbjct: 455 FCLSSVLSV---IDSLYLGREIHCYILKTGFV-LDLSVGSSLFTMYSKCGSIGDSYKVFE 510
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
++ ++ I+WT++IS +G A +A E R+M KPD+ A+L+A +++
Sbjct: 511 QIPVKDNISWTSMISGFTEHGHAYQAFELLRKMLTERSKPDQTTFSAILSAASSIHSLQK 570
Query: 592 GMEL 595
G E+
Sbjct: 571 GKEI 574
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 234/493 (47%), Gaps = 50/493 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
MP RNVVS+ +I+S + + AL+ F M E +FT ++S C + + E
Sbjct: 312 MPVRNVVSWTAIVSGFIKRDDSISALKFFKEMRKMKEETNKFTVTTVISACAKPHFIKEA 371
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-KSLVTWNSIVSIFG 117
Q+ +LK G + D VG AL+ +Y + + VF +M K+ W ++S F
Sbjct: 372 IQIHCWILKTGYYL-DPVVGAALINMYAKLHAISSSEMVFREMEGVKNPGIWTIMISSFA 430
Query: 118 KHGFVE---DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
K+ + D + + SS + VI L G +IH ++K GF
Sbjct: 431 KNQDSQSAIDLLLKLLQQGLRPDKFCLSSVLSVI------DSLYLGREIHCYILKTGFVL 484
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+L V +SL MY +C I + K+F+ + ++D +SW ++I E + +A EL +M
Sbjct: 485 DLSVGSSLFTMYSKCGSIGDSYKVFEQIPVKDNISWTSMISGFTEHGHAYQAFELLRKML 544
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ P+QTTF ++++ + + + GK IH + L + VG ALV+ Y+KC LE
Sbjct: 545 TERSKPDQTTFSAILSAASSIHSLQKGKEIHGYAYRARLGDEALVGGALVNMYSKCGALE 604
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSL 353
A F ++ K+ VS ++L+ GYA LL E+L + + F S VL +
Sbjct: 605 SARKMFDLLAVKDQVSCSSLVSGYAQNGWLEEALLLFHEMLISNFTIDSFAVSSVLGAIA 664
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
L QLH ++++G ++ V SL+T Y+K G I D
Sbjct: 665 GLNRLDFGTQLHAHLVKLGLDSDVSVGSSLVTVYSKCGSIEDCW---------------- 708
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
K +Q++ D++SW +IA+CA +G E L++++ MR I P
Sbjct: 709 ----------------KAFNQIDDADLISWTTMIASCAQHGKGVEALKIYEQMRREGIRP 752
Query: 470 DNYTFVSLLSACS 482
D+ TFV +LSACS
Sbjct: 753 DSVTFVGVLSACS 765
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 187/386 (48%), Gaps = 35/386 (9%)
Query: 262 KSIHAKVIKNAL-ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
K IH +IK AL + V ++L+D+Y K L A F I NKN++SWN +I GY
Sbjct: 69 KVIHTHLIKTALFNSNTVVANSLLDWYCKSGALFYALKVFDTIPNKNVISWNVIISGYNR 128
Query: 321 KSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
S + ++ G+ PN+ T+ VL + A + L + + +N Y G
Sbjct: 129 NSLFEDSWRFFSMMHFSGFDPNDITYGCVLSACAALETPNLGEQVYSLATKNGFYSNG-- 186
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+ ++G+I D LA R G++ + +++ + ++V W
Sbjct: 187 ---HVRAGMI-DLLA----------------------RNGRFGDALRVFYDVSCENVVCW 220
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
N +I+ +G+Y L++F M + P+++TF S+L+AC+ L + LG + G + K
Sbjct: 221 NSIISGAVKSGEYWIALDIFYQMSRRFVVPNSFTFSSILTACASLEEVELGKGIQGWVIK 280
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+ D FV +++MY KCG I +VK F+ M RNV++WTA++S + AL+
Sbjct: 281 C--CAKDIFVGTAIVNMYAKCGDIVDAVKEFSRMPVRNVVSWTAIVSGFIKRDDSISALK 338
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF-ERMNRSYGVEPEMDHYHCVVDL 618
F+EM + + ++ + V++AC ++E +++ + Y ++P + ++++
Sbjct: 339 FFKEMRKMKEETNKFTVTTVISACAKPHFIKEAIQIHCWILKTGYYLDPVVG--AALINM 396
Query: 619 LVRYGHLKEAEKIITTMPFPPNALIW 644
+ + +E + M N IW
Sbjct: 397 YAKLHAISSSEMVFREMEGVKNPGIW 422
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 212/459 (46%), Gaps = 42/459 (9%)
Query: 143 SFVGVIHGLSN-----EQDLEFGEQIHGLVIKNG-FDYELLVANSLVNMYFQCAGIWSAE 196
SF+ H +N + +E + IH +IK F+ +VANSL++ Y + ++ A
Sbjct: 46 SFLDPFHFFTNYIKSADHTVEETKVIHTHLIKTALFNSNTVVANSLLDWYCKSGALFYAL 105
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
K+F + ++V+SWN II + F + + M PN T+ V+++CA L+
Sbjct: 106 KVFDTIPNKNVISWNVIISGYNRNSLFEDSWRFFSMMHFSGFDPNDITYGCVLSACAALE 165
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
LG+ +++ KN + V + ++D A+ A F ++S +N+V WN++I
Sbjct: 166 TPNLGEQVYSLATKNGFYSNGHVRAGMIDLLARNGRFGDALRVFYDVSCENVVCWNSIIS 225
Query: 317 GYASKSSPTSIFLLIELLQLGYR---PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE 373
G A KS I L I Q+ R PN FTFS +L + + + ++L +
Sbjct: 226 G-AVKSGEYWIALDI-FYQMSRRFVVPNSFTFSSILTACASLEEVELG-----------K 272
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
+ G ++ AK + A I +Y + G + VK S++
Sbjct: 273 GIQGWVIKCCAKDIFVGTA------------------IVNMYAKCGDIVDAVKEFSRMPV 314
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
++VSW +++ D L+ FK MR + + +T +++SAC+K + +
Sbjct: 315 RNVVSWTAIVSGFIKRDDSISALKFFKEMRKMKEETNKFTVTTVISACAKPHFIKEAIQI 374
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNG 552
H I KT D V LI+MY K +I SS +F EM +N WT +IS+ N
Sbjct: 375 HCWILKTGYY-LDPVVGAALINMYAKLHAISSSEMVFREMEGVKNPGIWTIMISSFAKNQ 433
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+Q A++ ++ G +PD+ L +VL+ L RE
Sbjct: 434 DSQSAIDLLLKLLQQGLRPDKFCLSSVLSVIDSLYLGRE 472
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+H + KT + +S+T V N L+D Y K G++ ++K+F+ + ++NVI+W +IS N
Sbjct: 71 IHTHLIKTALFNSNTVVANSLLDWYCKSGALFYALKVFDTIPNKNVISWNVIISGYNRNS 130
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY 612
+ + F M F GF P+ + VL+AC G +++ ++ G
Sbjct: 131 LFEDSWRFFSMMHFSGFDPNDITYGCVLSACAALETPNLGEQVYSLATKN-GFYSNGHVR 189
Query: 613 HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
++DLL R G +A ++ + N + W + + G +
Sbjct: 190 AGMIDLLARNGRFGDALRVFYDVS-CENVVCWNSIISGAVK 229
>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
Length = 1121
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 173/661 (26%), Positives = 310/661 (46%), Gaps = 45/661 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGAQL 61
RNV+S+ ++S ++ G + + M G +P + LL+ S V E + +
Sbjct: 294 RNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWM 353
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE---DMPRKSLVTWNSIVSIFGK 118
+ G +A V TALL ++ R G +D+ +FE D + + WN++++ +
Sbjct: 354 AHDYIVGGGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAH 413
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ +FL L V +F+ + S+ QD G +H L+ ++GFD E+ V
Sbjct: 414 RGCSKEALFLLDSLQLQGVKPNCITFISSLGACSSLQD---GRALHLLIHESGFDQEVSV 470
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN+LV MY +C + + K+F ++ +D+ SWN+ I A + + ++L +M +
Sbjct: 471 ANALVTMYGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGF 530
Query: 239 FPNQTTFVYVINSC---AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ TF+ +NSC A LQ+ +L +H K+++ E D V SA+++ Y +C L+
Sbjct: 531 LYEKVTFLTALNSCTDPASLQDGVL---MHEKIVQCGYEADTVVASAVINMYGRCGGLDR 587
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLA 354
A F+ + +++ W ++ Y + +L G +P T
Sbjct: 588 AREIFTRVKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVT---------- 637
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
L+ L + G E++ + G+ +LA+ + L V AN + +
Sbjct: 638 --LVNLITCVADSGLEHF------------RDGVWISSLAWESGLESETMV--ANSLIEM 681
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV-LELFKYMRAARIYPDNYT 473
++ ++ + + + ++AA KE L LF M + P + T
Sbjct: 682 FSEFRSLSQARAIFDRNPEKSVALHTTMLAAYVKGERGKEAALTLFARMLLEGLEPSSVT 741
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
V+ +SAC L + + +H ++ + S+T V N L+DMYGK G + ++ IF+
Sbjct: 742 LVTAMSACGGLADPSSSKRVHERARELGL-ESETCVANGLVDMYGKAGDVDTARYIFDRA 800
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
RNV TW A+ A G + L R M+ G++PD V +++L+ C H GL+ E
Sbjct: 801 LRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEAR 860
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT--TMPFPPNALIWRTFLEGC 651
F M R +G++P HY CV+DLL R G L++AE I ++ P ++ +W L C
Sbjct: 861 YNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLGAC 920
Query: 652 Q 652
+
Sbjct: 921 R 921
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 172/657 (26%), Positives = 309/657 (47%), Gaps = 54/657 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGAQL 61
+N+ S+ SI+ AY G AL F MI G EP + + LL C L + +G +L
Sbjct: 85 KNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRLGDLAQGKRL 144
Query: 62 QASVLKNGLFCADA------FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
A + ++GL D F+G L+ +YG+ G DE F+ + K++ +W SI+
Sbjct: 145 HAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVA 204
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ G + F +++++ V F+ ++ + LE G IH + D +
Sbjct: 205 YFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQDKPLDSD 264
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L + N+LV+MY +C + A+++F +E R+V+SW ++ AE+ + L M+V
Sbjct: 265 LEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRETWGLLRSMAV 324
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKS---IHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ + P++ + ++N C+ +L + H ++ L+ + V +AL+ +A+C
Sbjct: 325 EGIKPDKVLLLTLLNVCS--SRGVLDEDSWMAHDYIVGGGLDREAVVATALLSMFARCGR 382
Query: 293 LEGAHLCFSEISNKN---IVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHV 348
++ A F ++++ + I WNA+I YA + L++ LQL G +PN TF
Sbjct: 383 VDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISS 442
Query: 349 LRSSLAFQLLQ-LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
L + + Q + LH LI G++ V +L+T Y K G + D
Sbjct: 443 LGACSSLQDGRALHLLIHESGFDQEVSVANALVTMYGKCGSLLD---------------- 486
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+ KL S++ D+ SWN IAA +++G E ++L MR
Sbjct: 487 ----------------SAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGF 530
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
+ TF++ L++C+ +L G +H I + +DT V + +I+MYG+CG + +
Sbjct: 531 LYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCG-YEADTVVASAVINMYGRCGGLDRAR 589
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+IF + +VI WT +++ G ++ +E FR M G KP V L+ ++T G
Sbjct: 590 EIFTRVKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSG 649
Query: 588 L--VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
L R+G+ + G+E E + ++++ + L +A I P AL
Sbjct: 650 LEHFRDGV-WISSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVAL 705
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 161/655 (24%), Positives = 298/655 (45%), Gaps = 70/655 (10%)
Query: 14 SAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV-EGAQLQASVLKNGLFC 72
+A SR G V+DA R + ++ C L + +G +L A + ++GL
Sbjct: 3 AAISRSG-VDDACRSYARLLK--------------ECGRLGDLAQGKRLHAQIRESGLLL 47
Query: 73 ADA------FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
D F+G L+ +YG+ G DE F+ + K++ +W SI+ + G +
Sbjct: 48 DDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQAL 107
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF---DYE----LLVA 179
F +++++ V + ++ DL G+++H + ++G D E +
Sbjct: 108 ERFHQMIKAGVEPDRLVYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLG 167
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N LV MY +C A++ F + +++ SW +I+ A + +ALE + +M V
Sbjct: 168 NCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVE 227
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P++ F+ +N C L+ G IH ++ L+ D+ +G+ALV Y KC L+ A
Sbjct: 228 PDRLVFLAALNVCGILKRLEDGAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKEL 287
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVL-----RSSL 353
F + +N++SW L+ +A + L+ + + G +P++ +L R L
Sbjct: 288 FDCLERRNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVL 347
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
H I+ G + V +L++ +A+ G + A
Sbjct: 348 DEDSWMAHDYIVGGGLDREAVVATALLSMFARCGRVDKARE------------------- 388
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
I+ + ++ V I WN +I A AH G KE L L ++ + P+ T
Sbjct: 389 IFEKVADHSAQV----------IECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCIT 438
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F+S L ACS L + G +LH LI ++ + V N L+ MYGKCGS+ S K+F+EM
Sbjct: 439 FISSLGACSSLQD---GRALHLLIHESG-FDQEVSVANALVTMYGKCGSLLDSAKLFSEM 494
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++++ +W + I+A +G + ++ +M GF ++V + L +C +++G+
Sbjct: 495 AEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDGV 554
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ E++ + G E + V+++ R G L A +I T + + ++W L
Sbjct: 555 LMHEKIVQC-GYEADTVVASAVINMYGRCGGLDRAREIFTRVK-TFDVILWTGML 607
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 176/356 (49%), Gaps = 9/356 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSC-DSLNPVEG 58
M ++++ S+NS I+A+S G ++ +++ M GF + TF L SC D + +G
Sbjct: 494 MAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDG 553
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +++ G + AD V +A++ +YGR G LD +F + ++ W +++++ +
Sbjct: 554 VLMHEKIVQCG-YEADTVVASAVINMYGRCGGLDRAREIFTRVKTFDVILWTGMLTVYCQ 612
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE--QDLEFGEQIHGLVIKNGFDYEL 176
G + M F ++ + T + V +I +++ + G I L ++G + E
Sbjct: 613 LGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGLEHFRDGVWISSLAWESGLESET 672
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK--ALELYLRMS 234
+VANSL+ M+ + + A +F + V T++ A + E GK AL L+ RM
Sbjct: 673 MVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLAAYVKGER-GKEAALTLFARML 731
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
++ + P+ T V +++C GL + K +H + + LE + V + LVD Y K +++
Sbjct: 732 LEGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVD 791
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVL 349
A F +N+ +WNA+ Y + L+ +Q GYRP+ TF +L
Sbjct: 792 TARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLL 847
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/509 (22%), Positives = 231/509 (45%), Gaps = 53/509 (10%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMF------------------------------LYM 32
DR V +++S ++RCG V+ A +F L++
Sbjct: 364 DREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFL 423
Query: 33 IN----RGFEPTQFTF-GGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGR 87
++ +G +P TF L +C SL +G L + ++G F + V AL+ +YG+
Sbjct: 424 LDSLQLQGVKPNCITFISSLGACSSLQ--DGRALHLLIHESG-FDQEVSVANALVTMYGK 480
Query: 88 HGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES-SFVG 146
G L + +F +M K L +WNS ++ HG ++C+ L + +R E L E +F+
Sbjct: 481 CGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLL-DQMRGEGFLYEKVTFLT 539
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
++ ++ L+ G +H +++ G++ + +VA++++NMY +C G+ A ++F V+ D
Sbjct: 540 ALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFD 599
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA--GLQNSILGKSI 264
V+ W ++ + + +E + M + + P T V +I A GL++ G I
Sbjct: 600 VILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGLEHFRDGVWI 659
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY--ASKS 322
+ ++ LE + V ++L++ +++ +L A F K++ ++ Y +
Sbjct: 660 SSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLAAYVKGERG 719
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF----QLLQLHCLIIRMGYENYEYVLGS 378
++ L +L G P+ T + + ++H +G E+ V
Sbjct: 720 KEAALTLFARMLLEGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANG 779
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE----RP 434
L+ Y K+G + D ++ + R V N +AG Y + G + L+ ++ RP
Sbjct: 780 LVDMYGKAGDV-DTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRP 838
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMR 463
D V++ +++ C H+G +E F MR
Sbjct: 839 DSVTFVSLLSVCGHSGLLEEARYNFVAMR 867
>gi|147817099|emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
Length = 2076
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 180/671 (26%), Positives = 312/671 (46%), Gaps = 89/671 (13%)
Query: 2 PDRNVVSFNSIISAY-----SRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNP 55
P+R++V++N+I+ AY S G ++ L +F + T+ T +L C +
Sbjct: 146 PERDLVTWNAILGAYASSVDSNDGNAQEGLHLFRLLRESLGSTTRMTLAPVLKLCSNSXC 205
Query: 56 VEGAQ-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+ A+ + +K GL D FV L+ +Y + G + + +F+ M + +V WN ++
Sbjct: 206 LWAAKGVHGYAIKIGLVW-DVFVFGTLMNIYSKCGRMXDARLLFDGMRERDVVLWNMMLK 264
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + G ++ LF E RS + E S +++G+ E
Sbjct: 265 GYVQLGLEKEAFQLFSEFHRSGLXPDEFSVQLILNGVFEVNXDE---------------- 308
Query: 175 ELLVANSLVNMYFQCAGIWSAE-------KMFKDVEIRDVVSWNTIIGA-LAESENFGKA 226
G W A+ K+ + DV WN + L +N+G A
Sbjct: 309 ----------------GKWHADQVQAYXXKLSLSDDNXDVFCWNKKLSEYLWAGDNWG-A 351
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
+E ++ M+ V + T + V+ + A N + + IH +K + D FV +AL+D
Sbjct: 352 IECFVNMNGLNVXYDXVTLLEVLAAVADGLN--ISRQIHVHALKTSNIADSFVATALIDV 409
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTF 345
Y++ +E A L F + ++ WNA++ GY + L L+ + G + ++ T
Sbjct: 410 YSRSGKMEEAELLFQNKDDLDLACWNAMMFGYIISNDGNKALGLFSLINRSGEKSDQITL 469
Query: 346 SHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
+ ++ LL Q+H +I+ G+ + YV ++ Y K G +
Sbjct: 470 ATAAKACGCLVLLDZGKQIHAHVIKAGFXSDLYVNSGILDMYIKCGDM------------ 517
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
+ AGI + + + PD V+W +I+ C NG+ + L ++
Sbjct: 518 --------VNAGI------------VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHQ 557
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
MR + + PD YTF +L+ A S + L G LH + K + +S D FV L+DMY KCG
Sbjct: 558 MRQSGVMPDEYTFATLIKASSYVTALEQGRQLHANVIKLDCVS-DPFVGTSLVDMYAKCG 616
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+I ++F +M RN++ W A++ + +G A+ A+ F+ M+ G +PDRV+ I +L+
Sbjct: 617 NIEDXYRLFKKMNVRNIVLWNAMLVGIAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 676
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC GL E E F M G+EPE++HY C+VD L G ++E +K+I TMPF +A
Sbjct: 677 ACSLAGLTSEAYEYFHSMPNDCGIEPEIEHYSCLVDALGXAGLVQEXDKVIETMPFKASA 736
Query: 642 LIWRTFLEGCQ 652
+ R L C+
Sbjct: 737 SMNRALLGACR 747
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 129/549 (23%), Positives = 231/549 (42%), Gaps = 57/549 (10%)
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+L G+ H ++ +G + + N+L+ +Y +C + A ++F RD+V+WN I+
Sbjct: 98 HNLLLGKCTHARIVVSGTAGDHFLTNNLLTLYSKCGSLSFACQVFDTTPERDLVTWNAIL 157
Query: 215 GALAES--ENFGKA---LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
GA A S N G A L L+ + + + T V+ C+ K +H I
Sbjct: 158 GAYASSVDSNDGNAQEGLHLFRLLRESLGSTTRMTLAPVLKLCSNSXCLWAAKGVHGYAI 217
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF- 328
K L DVFV L++ Y+KC + A L F + +++V WN ++ GY F
Sbjct: 218 KIGLVWDVFVFGTLMNIYSKCGRMXDARLLFDGMRERDVVLWNMMLKGYVQLGLEKEAFQ 277
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQL---------LQLHCLIIRMGYENY------- 372
L E + G P+EF+ +L +Q + + + +N
Sbjct: 278 LFSEFHRSGLXPDEFSVQLILNGVFEVNXDEGKWHADQVQAYXXKLSLSDDNXDVFCWNK 337
Query: 373 ---EYV--------------LGSLMTSYAKSGLISDALAFVTALNIPR-----AVVPANI 410
EY+ + L Y L+ A LNI R A+ +NI
Sbjct: 338 KLSEYLWAGDNWGAIECFVNMNGLNVXYDXVTLLEVLAAVADGLNISRQIHVHALKTSNI 397
Query: 411 --------IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
+ +Y+R+G+ E L + D+ WN ++ + D + L LF +
Sbjct: 398 ADSFVATALIDVYSRSGKMEEAELLFQNKDDLDLACWNAMMFGYIISNDGNKALGLFSLI 457
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ D T + AC L L G +H + K SD +V + ++DMY KCG
Sbjct: 458 NRSGEKSDQITLATAAKACGCLVLLDZGKQIHAHVIKAG-FXSDLYVNSGILDMYIKCGD 516
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ ++ +FN ++ + + WT++IS NG +AL + +M G PD ++ A
Sbjct: 517 MVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHQMRQSGVMPDEYTFATLIKA 576
Query: 583 CRHGGLVREGMELFERMNRSYGV-EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
+ + +G +L + + V +P + +VD+ + G++++ ++ M N
Sbjct: 577 SSYVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDXYRLFKKMNV-RNI 633
Query: 642 LIWRTFLEG 650
++W L G
Sbjct: 634 VLWNAMLVG 642
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 188/459 (40%), Gaps = 61/459 (13%)
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
++ + N +LGK HA+++ + D F+ + L+ Y+KC +L A F ++
Sbjct: 90 LLRTAISTHNLLLGKCTHARIVVSGTAGDHFLTNNLLTLYSKCGSLSFACQVFDTTPERD 149
Query: 308 IVSWNALILGYASK------SSPTSIFLLIELLQLGYRPNEFTFSHVLR----SSLAFQL 357
+V+WNA++ YAS ++ + L L + T + VL+ S +
Sbjct: 150 LVTWNAILGAYASSVDSNDGNAQEGLHLFRLLRESLGSTTRMTLAPVLKLCSNSXCLWAA 209
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+H I++G +V G+LM Y+K G + DA + R VV N++ Y +
Sbjct: 210 KGVHGYAIKIGLVWDVFVFGTLMNIYSKCGRMXDARLLFDGMR-ERDVVLWNMMLKGYVQ 268
Query: 418 TGQYNETVKLLSQLERP------------------------------------------- 434
G E +L S+ R
Sbjct: 269 LGLEKEAFQLFSEFHRSGLXPDEFSVQLILNGVFEVNXDEGKWHADQVQAYXXKLSLSDD 328
Query: 435 --DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
D+ WN ++ GD +E F M + D T + +L+A + N++
Sbjct: 329 NXDVFCWNKKLSEYLWAGDNWGAIECFVNMNGLNVXYDXVTLLEVLAAVADGLNISRQIH 388
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+H L KT I +D+FV LID+Y + G + + +F D ++ W A++ ++
Sbjct: 389 VHAL--KTSNI-ADSFVATALIDVYSRSGKMEEAELLFQNKDDLDLACWNAMMFGYIISN 445
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY 612
+AL F + G K D++ L AC L+ ZG ++ + ++ G ++
Sbjct: 446 DGNKALGLFSLINRSGEKSDQITLATAAKACGCLVLLDZGKQIHAHVIKA-GFXSDLYVN 504
Query: 613 HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
++D+ ++ G + A I+ P+ + W + + GC
Sbjct: 505 SGILDMYIKCGDMVNA-GIVFNYISAPDDVAWTSMISGC 542
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+ SLL NL LG H I + + D F+ N L+ +Y KCGS+ + ++F+
Sbjct: 87 WFSLLRTAISTHNLLLGKCTHARIVVSGT-AGDHFLTNNLLTLYSKCGSLSFACQVFDTT 145
Query: 534 TDRNVITWTALISALGL-----NGFAQRALEKFREM-EFLGFKPDRVALIAVLTAC 583
+R+++TW A++ A +G AQ L FR + E LG R+ L VL C
Sbjct: 146 PERDLVTWNAILGAYASSVDSNDGNAQEGLHLFRLLRESLG-STTRMTLAPVLKLC 200
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/508 (28%), Positives = 260/508 (51%), Gaps = 39/508 (7%)
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
L +DL+ +QIH +I +G + ++NSL+N Y C + A+++F ++VVSW
Sbjct: 31 LRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSW 90
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
+I LA+++ F +A++++ M++ PN T V+ + A L + KS+H ++
Sbjct: 91 TILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVR 150
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFL 329
E +VFV +ALVD Y+K + A F +S +N+VSWNA++ GY+ S +I L
Sbjct: 151 GGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDL 210
Query: 330 LIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAK 385
+ + G + +T ++ +SL+ LQ +H IIR GYEN +++ +LM Y
Sbjct: 211 FNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVS 270
Query: 386 SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA 445
+ DA ++ S++ D+ +W +++
Sbjct: 271 HNCVDDAH--------------------------------RVFSEMFVKDVAAWTLMLTG 298
Query: 446 CAHNGDYKEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
+ + ++ F M + + D+ + +LS+CS L G +H L KT +
Sbjct: 299 FSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKT-CFA 357
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
++ FV + +IDMY CG++ + + F M +++V+ W A+I+ G+NG+ A++ F +M
Sbjct: 358 NNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQM 417
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
+ G PD ++VL AC H G+V EG+++F M ++ P + HY CV+D+L R G
Sbjct: 418 KGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQ 477
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L A I MPF P+ ++ T L C+
Sbjct: 478 LDAAYSFINNMPFQPDFDVYSTLLGACR 505
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 232/482 (48%), Gaps = 33/482 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPVEGAQ 60
P +NVVS+ +IS ++ +A+ +F M F+P T +L +L + A+
Sbjct: 83 PCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAK 142
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
G F + FV TAL+ +Y + GC+ +FE M +++V+WN+IVS + HG
Sbjct: 143 SVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHG 202
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F E+ + LF + R + + + + +I + L+ G IHG +I+ G++ + +
Sbjct: 203 FSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKT 262
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVF 239
+L+++Y + A ++F ++ ++DV +W ++ + ++ +A++ + +M + +
Sbjct: 263 ALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLK 322
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
+ + +++SC+ G+ +HA IK ++FVGSA++D YA C NLE A
Sbjct: 323 LDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRF 382
Query: 300 FSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F + K++V WNA+I G T +I L +++ G P+E TF VL +
Sbjct: 383 FYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYA------- 435
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
C M YE + + TS+ +IP A +I I R
Sbjct: 436 ---CSHAGMVYEGLQIFYHMVKTSH----------------DIPNLQHYACVI-DILGRA 475
Query: 419 GQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
GQ + ++ + +PD ++ ++ AC +G+ K E+ + + + P++ + L
Sbjct: 476 GQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQ--KIFEMEPNDAGYYVL 533
Query: 478 LS 479
LS
Sbjct: 534 LS 535
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 131/579 (22%), Positives = 248/579 (42%), Gaps = 84/579 (14%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L L P++ Q+ A ++ +GL + F+ +L+ Y G L + +F P K++
Sbjct: 31 LRKLKDLKPLQ--QIHAQIITSGL-THNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNV 87
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
V+W ++S K+ + + +F E+ + V+ +N + + +H
Sbjct: 88 VSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCF 147
Query: 167 VIKNGFDYELLVANSLVNMY--FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
++ GF+ + V +LV+MY F C G+ A ++F+ + R+VVSWN I+ ++
Sbjct: 148 WVRGGFEGNVFVETALVDMYSKFGCMGV--ARQLFESMSERNVVSWNAIVSGYSDHGFSE 205
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
+A++L+ M + + T + +I + + +G IH +I+ E D + +AL+
Sbjct: 206 EAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALM 265
Query: 285 DFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFT 344
D Y + ++ AH FSE+ K++ +W ++ G++S R +
Sbjct: 266 DIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSG-----------------RHWDRA 308
Query: 345 FSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
H L Q L+L + VL +++S + SG + V AL I +
Sbjct: 309 IKH-FNKMLGIQNLKLDSI-----------VLMGILSSCSHSGALQQGRR-VHALAI-KT 354
Query: 405 VVPANIIAG-----IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
NI G +Y G + + + D+V WN +IA NG + ++LF
Sbjct: 355 CFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLF 414
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL--HGLIKKTEIISSDTFVCNMLIDMY 517
M+ + + PD TFVS+L ACS + G + H + +I + + C +ID+
Sbjct: 415 LQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYAC--VIDIL 472
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
G+ G + ++ N M F+PD
Sbjct: 473 GRAGQLDAAYSFINNMP----------------------------------FQPDFDVYS 498
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
+L ACR G ++ G E+ +++ + +EP Y+ ++
Sbjct: 499 TLLGACRIHGNIKLGHEISQKI---FEMEPNDAGYYVLL 534
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 135/256 (52%), Gaps = 4/256 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCD-SLNPVE-G 58
M +RNVVS+N+I+S YS G+ E+A+ +F M +G +T L+ S+ ++ G
Sbjct: 183 MSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +++ G + D + TAL+ +Y H C+D+ VF +M K + W +++ F
Sbjct: 243 TGIHGFIIRTG-YENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSS 301
Query: 119 HGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + F +++ + L +G++ S+ L+ G ++H L IK F +
Sbjct: 302 GRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIF 361
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V +++++MY C + A++ F + +DVV WN +I + A++L+L+M
Sbjct: 362 VGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSG 421
Query: 238 VFPNQTTFVYVINSCA 253
+ P+++TFV V+ +C+
Sbjct: 422 LDPDESTFVSVLYACS 437
>gi|357446017|ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 622
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 268/543 (49%), Gaps = 40/543 (7%)
Query: 120 GFVEDCMFLFCELVRSEVALTESSFV--GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + F +L S FV VI S FG Q+H L G + +
Sbjct: 43 GLYHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLHCLAFITGSYTDPI 102
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V+NS+++MY + I SA ++F + RD ++WN++I A ++ +AL++
Sbjct: 103 VSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLG 162
Query: 238 VFPNQTTFVYVINSCAGLQNSI---LGKSIHAKVIKNA---LECDVFVGSALVDFYAKCD 291
P +++ C G + + +G+ IH V+ + ++ VF+ +A VDFY +C
Sbjct: 163 FLPKPELLASMVSMC-GREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCG 221
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLR 350
+ A F E+ KN VSW A+I G A+ +Q+ G PN T
Sbjct: 222 DSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVT------ 275
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
L+ L R G+ Y G + YA F + + PA I
Sbjct: 276 ------LIALLAACARPGFVKY----GKEIHGYA----------FRRGFDSCHSFSPALI 315
Query: 411 IAGIYNRTGQ-YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+Y GQ + ++ D+V W+ +I + A G+ + L+LF MR P
Sbjct: 316 Y--LYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEP 373
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ T ++++SAC+ L + G +HG I K I S FVCN LI+MY KCGS+ S KI
Sbjct: 374 NYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFS-IFVCNALINMYAKCGSLDDSRKI 432
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F EM R+ +TW ++ISA GL+G+ ++AL+ F EM+ G K D V +AVL+AC H GLV
Sbjct: 433 FLEMPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLV 492
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG +LFE++N + ++HY C++DL R G L++A +I+ TMP P+A IW + +
Sbjct: 493 TEGQQLFEQVNADCEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVS 552
Query: 650 GCQ 652
C+
Sbjct: 553 SCK 555
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/570 (23%), Positives = 268/570 (47%), Gaps = 63/570 (11%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G QL G + D V +++ +Y + ++ VF+ MP + +TWNS+++ +
Sbjct: 85 GTQLHCLAFITGSY-TDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYL 143
Query: 118 KHGFVEDCMFLFCE------LVRSEVALTESSFVGVIHGLSNEQDL--EFGEQIHGLVIK 169
++G + + + + + L + E+ + S G E DL G QIHGLV+
Sbjct: 144 QNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCG------REMDLGWRIGRQIHGLVVV 197
Query: 170 NG---FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
+G + + ++ + V+ YF+C A +F ++E+++ VSW +I A ++++ A
Sbjct: 198 DGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVA 257
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
L Y M V+ V PN+ T + ++ +CA GK IH + + AL+
Sbjct: 258 LACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYL 317
Query: 287 YAKC-DNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFT 344
Y +C +L A F S +++V W+++I YA + S ++ L ++ PN T
Sbjct: 318 YCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVT 377
Query: 345 FSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
V+ + + ++S+ G+I ++ I +
Sbjct: 378 LLAVISAC-------------------------TNLSSFKHGGVIH---GYILKFGIGFS 409
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+ N + +Y + G +++ K+ ++ D V+WN +I+A +G ++ L+ F M+
Sbjct: 410 IFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKE 469
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT-EI-ISSDTFVCNMLIDMYGKCGS 522
+ D TF+++LSAC+ + G L + EI I+ + + C LID++G+ G
Sbjct: 470 RGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPITIEHYAC--LIDLHGRSGK 527
Query: 523 IGSSVKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA---LIA 578
+ +++I M + + W++L+S+ L+G + + + + + +P+ A L++
Sbjct: 528 LEDALEILRTMPMKPSARIWSSLVSSCKLHG--RLDIAESLSSQLIRSEPNNAASYTLLS 585
Query: 579 VLTACRHGGL----VREGMELFERMNRSYG 604
++ A + L VRE M+L +R+ + YG
Sbjct: 586 MIHAEKGRWLDIEQVRETMKL-QRLRKCYG 614
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 125/495 (25%), Positives = 237/495 (47%), Gaps = 35/495 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CD---SLNPV 56
MP R+ +++NS+I+AY + G + +AL+M GF P ++S C L
Sbjct: 127 MPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWR 186
Query: 57 EGAQLQASVLKNGLF--CADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
G Q+ V+ +G F+ TA + Y R G SVF++M K+ V+W +++S
Sbjct: 187 IGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVIS 246
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + + + E+ V+ + + ++ + +++G++IHG + GFD
Sbjct: 247 GCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDS 306
Query: 175 ELLVANSLVNMYFQCA-GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ +L+ +Y +C + AE++F+ +RDVV W++IIG+ A KAL+L+ +M
Sbjct: 307 CHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKM 366
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ PN T + VI++C L + G IH ++K + +FV +AL++ YAKC +L
Sbjct: 367 RTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSL 426
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
+ + F E+ +++ V+WN++I Y ++ E+ + G + + TF VL +
Sbjct: 427 DDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSAC 486
Query: 353 LAFQLLQLHCLIIRMGYENYEYV------------LGSLMTSYAKSGLISDALAFVTALN 400
H ++ G + +E V L+ + +SG + DAL + +
Sbjct: 487 -------NHAGLVTEGQQLFEQVNADCEIPITIEHYACLIDLHGRSGKLEDALEILRTMP 539
Query: 401 I-PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD---IVSWNIVIAACAHNG---DYK 453
+ P A + +++++ G+ + L SQL R + S+ ++ A G D +
Sbjct: 540 MKPSARIWSSLVSSC-KLHGRLDIAESLSSQLIRSEPNNAASYTLLSMIHAEKGRWLDIE 598
Query: 454 EVLELFKYMRAARIY 468
+V E K R + Y
Sbjct: 599 QVRETMKLQRLRKCY 613
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 161/575 (28%), Positives = 273/575 (47%), Gaps = 45/575 (7%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
+ G L + +F+ M + ++W ++++ + + + LF + + +
Sbjct: 69 KQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMIS 128
Query: 147 V-IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR 205
V + + ++ FGE +HG +K+G + + V+++L++MY + I ++F+ + R
Sbjct: 129 VALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTR 188
Query: 206 DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL--GKS 263
+VVSW II L + + L + M V + TF + + A +S+L GK+
Sbjct: 189 NVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASA--DSSLLHHGKA 246
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS 323
IH + IK + FV + L Y KC + F ++ ++VSW LI Y
Sbjct: 247 IHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGE 306
Query: 324 PTSIFLLIELLQLGY-RPNEFTFSHVLRS----SLAFQLLQLHCLIIRMGYENYEYVLGS 378
+ ++ Y PN++TF+ V+ S + A Q+H ++R+G N V S
Sbjct: 307 EEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANS 366
Query: 379 LMTSYAKSGLI-SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
++T Y+K GL+ S +L F + R DI+
Sbjct: 367 IITLYSKCGLLKSASLVF---------------------------------HGITRKDII 393
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SW+ +I+ + G KE + +MR P+ + S+LS C + L G +H +
Sbjct: 394 SWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHL 453
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
I + V + +I MY KCGS+ + KIFN M ++I+WTA+I+ +G++Q A
Sbjct: 454 LCIGI-DHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEA 512
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
+ F ++ +G KPD V I VLTAC H G+V G F M Y + P +HY C++D
Sbjct: 513 INLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLID 572
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
LL R G L EAE II +MPF + ++W T L C+
Sbjct: 573 LLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACR 607
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 152/581 (26%), Positives = 273/581 (46%), Gaps = 44/581 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFG-GLLSCD-SLNPVE 57
M R+ +S+ ++I+ Y +AL +F M ++ G + QF L +C +N
Sbjct: 83 MTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGVNICF 142
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G L +K+GL + FV +AL+ +Y + G +++ VFE M +++V+W +I++
Sbjct: 143 GELLHGFSVKSGLIHS-VFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLV 201
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G+ + + F E+ RS+V +F + ++ L G+ IH IK GFD
Sbjct: 202 HAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSF 261
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+L MY +C ++F+ + + DVVSW T+I + A+E + RM
Sbjct: 262 VINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSY 321
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN+ TF VI+SCA L + G+ IH V++ L + V ++++ Y+KC L+ A
Sbjct: 322 VSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSAS 381
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
L F I+ K+I+SW+ +I Y+ F + ++ G +PNEF S VL +
Sbjct: 382 LVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMA 441
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
LL Q+H ++ +G ++ V ++++ Y+K G + +A
Sbjct: 442 LLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEA-------------------- 481
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K+ + ++ DI+SW +I A +G +E + LF+ + + + PD
Sbjct: 482 ------------SKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYV 529
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
F+ +L+AC+ + LG L+ IS LID+ + G + + I
Sbjct: 530 MFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRS 589
Query: 533 MT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
M + + W+ L+ A ++G R ++ + L P+
Sbjct: 590 MPFHTDDVVWSTLLRACRVHGDVDRG--RWTAEQLLQLDPN 628
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 230/486 (47%), Gaps = 47/486 (9%)
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ +L NS + + + A MF + RD +SW T+I + + +AL L+ M
Sbjct: 55 HNMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNM 114
Query: 234 SVDIVFPNQTTFV--YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
V P + F+ + +CA N G+ +H +K+ L VFV SAL+D Y K
Sbjct: 115 WVH-PGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVG 173
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL---QLGYRPNEFTFSHV 348
+E F ++ +N+VSW A+I G L + ++GY + TF+
Sbjct: 174 KIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGY--DSHTFAIA 231
Query: 349 LRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
L++S LL +H I+ G++ +V+ +L T
Sbjct: 232 LKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLAT----------------------- 268
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+YN+ G+ + ++L ++ PD+VSW +I+ G+ + +E FK MR
Sbjct: 269 ---------MYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRK 319
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+ + P+ YTF +++S+C+ L G +HG + + ++++ + V N +I +Y KCG +
Sbjct: 320 SYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALS-VANSIITLYSKCGLLK 378
Query: 525 SSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
S+ +F+ +T +++I+W+ +IS G+A+ A + M G KP+ AL +VL+ C
Sbjct: 379 SASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCG 438
Query: 585 HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
L+ +G ++ + G++ E + ++ + + G ++EA KI M + + W
Sbjct: 439 SMALLEQGKQVHAHL-LCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKI-NDIISW 496
Query: 645 RTFLEG 650
+ G
Sbjct: 497 TAMING 502
>gi|302765755|ref|XP_002966298.1| hypothetical protein SELMODRAFT_61000 [Selaginella moellendorffii]
gi|300165718|gb|EFJ32325.1| hypothetical protein SELMODRAFT_61000 [Selaginella moellendorffii]
Length = 644
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 160/585 (27%), Positives = 294/585 (50%), Gaps = 39/585 (6%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
VG ALLG+Y R G ++ +F+ M ++ W ++S + + G++ + + LF + +
Sbjct: 63 VGVALLGMYVRCGSIESARKLFDSMAVERNGECWTVMISAYVRRGWINEALLLFKKSLLE 122
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL--VANSLVNMYFQCAGIW 193
V +E +F+ ++H S L+ G+++H L+ + GF + +A SL+ MY +C +
Sbjct: 123 GVRPSEGTFIALLHACSRPASLDQGKKLHRLLEEAGFQESIAPSLATSLIKMYGKCGSLD 182
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
A K+ + +E RDV W +I +L+ +A EL RM ++ P++ TF+ V+ +C
Sbjct: 183 EAWKVMEKIESRDVELWTVMIASLSHFGKLDRAFELLKRMDLEGDRPSKMTFMAVLRACK 242
Query: 254 G-LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
+ +G +H + + LE DV VG++LV+ YA+ + + A FS+I +++ SWN
Sbjct: 243 DHPEARQVGGVLHGLIRERGLESDVGVGTSLVNMYARWGDPQQAQEVFSQIEARDVSSWN 302
Query: 313 ALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYEN 371
L+ Y+ S ++ L E++ G +P+ T + V+ + + L+ G
Sbjct: 303 CLLAAYSRCSRQEQALVLYREMMLEGVKPDRLTLNTVIDVCASLKDLE-------QGSRI 355
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
++ + A SG SD L TAL Y R G+ + +++ L
Sbjct: 356 HQQI--------ASSGFASD-LMLDTALIT------------FYGRCGKLDAALEIFEAL 394
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
D V+WN +IA+ + + + F+ M+ + P T +++L C + L
Sbjct: 395 PARDNVTWNTMIASLNDHSSPEAAMGFFQRMQQEGMAPSRVTLLTVLGLCGSVGEAKL-- 452
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H ++++ D+ V N LI YG+CG + +V+IF + + +W A++ A
Sbjct: 453 -VHSCVRESGF-EQDSEVKNTLITAYGRCGGLAQAVEIFEALPRKIESSWNAMMGAYAAQ 510
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE-PEMD 610
G + ALE F M L + L++VL+AC H GL+ G+++F +GV+ ++
Sbjct: 511 GKPRAALELFHRMVKLEQMIQPITLVSVLSACSHAGLLHRGLQIFASTASDFGVQWRSLE 570
Query: 611 HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
Y C +DLL R G L+EAE ++ + F ++++W T L G + R
Sbjct: 571 LYGCAIDLLGRAGQLQEAEMLVASSDFSGSSVLWITLL-GASKVR 614
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 222/486 (45%), Gaps = 38/486 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQL 61
+RN + +ISAY R G++ +AL +F + G P++ TF LL +C ++ +
Sbjct: 90 ERNGECWTVMISAYVRRGWINEALLLFKKSLLEGVRPSEGTFIALLHACSRPASLDQGKK 149
Query: 62 QASVLKNGLFCAD--AFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+L+ F + T+L+ +YG+ G LDE V E + + + W +++
Sbjct: 150 LHRLLEEAGFQESIAPSLATSLIKMYGKCGSLDEAWKVMEKIESRDVELWTVMIASLSHF 209
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL-EFGEQIHGLVIKNGFDYELLV 178
G ++ L + ++ +F+ V+ + + + G +HGL+ + G + ++ V
Sbjct: 210 GKLDRAFELLKRMDLEGDRPSKMTFMAVLRACKDHPEARQVGGVLHGLIRERGLESDVGV 269
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SLVNMY + A+++F +E RDV SWN ++ A + +AL LY M ++ V
Sbjct: 270 GTSLVNMYARWGDPQQAQEVFSQIEARDVSSWNCLLAAYSRCSRQEQALVLYREMMLEGV 329
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P++ T VI+ CA L++ G IH ++ + D+ + +AL+ FY +C L+ A
Sbjct: 330 KPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSGFASDLMLDTALITFYGRCGKLDAALE 389
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F + ++ V+WN +I SSP + + +Q G P+ T VL +
Sbjct: 390 IFEALPARDNVTWNTMIASLNDHSSPEAAMGFFQRMQQEGMAPSRVTLLTVLGLCGSVGE 449
Query: 358 LQL-HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
+L H + G+E V +L+T+Y + G ++ A+ AL PR +
Sbjct: 450 AKLVHSCVRESGFEQDSEVKNTLITAYGRCGGLAQAVEIFEAL--PRKIES--------- 498
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
SWN ++ A A G + LELF M T VS
Sbjct: 499 ---------------------SWNAMMGAYAAQGKPRAALELFHRMVKLEQMIQPITLVS 537
Query: 477 LLSACS 482
+LSACS
Sbjct: 538 VLSACS 543
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 153/527 (29%), Positives = 256/527 (48%), Gaps = 53/527 (10%)
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
+N F + NSL++MY + + A +F + RD VSW ++ L + F A++
Sbjct: 95 RNAFTW-----NSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVK 149
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
+L M + + P+Q V++SCA + +G+ +H+ VIK L V V ++++ Y
Sbjct: 150 TFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYG 209
Query: 289 KCDNLEGAHLCFSEIS-------------------------------NKNIVSWNALILG 317
KC + E A F + ++IVSWNA+I G
Sbjct: 210 KCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAG 269
Query: 318 YASK--SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYEN 371
Y F L P+EFT + VL + ++L Q+H I+R G
Sbjct: 270 YNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPY 329
Query: 372 YEYVLGSLMTSYAKSGLISDAL-----AFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
++ +L+++YAKSG + A A V LN V+ + Y + G + +
Sbjct: 330 SSQIMNALISTYAKSGSVETARRIMDKAVVADLN----VISFTALLEGYVKLGDTKQARE 385
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+ + D+++W +I NG E +ELF+ M + P+++T ++LSAC+ L
Sbjct: 386 VFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAY 445
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN-VITWTALI 545
L G +H ++ + V N +I +Y + GS+ + ++F+++ R +TWT++I
Sbjct: 446 LGYGKQIHCRAIRS-LQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMI 504
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
AL +G ++A+ F EM +G KPDRV I V +AC H G + +G +E+M +G+
Sbjct: 505 VALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGI 564
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
PEM HY C+VDLL R G L EA + I MP P+ ++W + L C+
Sbjct: 565 VPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACR 611
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 143/659 (21%), Positives = 263/659 (39%), Gaps = 153/659 (23%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--G 58
MP+R+ VS+ ++ +R G DA++ FL M+ G P+QF +LS + G
Sbjct: 123 MPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIG 182
Query: 59 AQLQASVLKNGLF---------------CADAFVG---------------TALLGLYGRH 88
++ + V+K GL C DA A++ LY
Sbjct: 183 RKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQ 242
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCE-LVRSEVALTESSFVGV 147
G +D +S+FE+M +S+V+WN+I++ + ++G + + F L S + E + V
Sbjct: 243 GRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSV 302
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI--- 204
+ +N + L+ G+Q+H +++ G Y + N+L++ Y + + +A ++ +
Sbjct: 303 LSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADL 362
Query: 205 ------------------------------RDVVSWNTIIGALAESENFGKALELYLRMS 234
RDV++W +I ++ +A+EL+ M
Sbjct: 363 NVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMI 422
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
PN T V+++CA L GK IH + I++ E V V +A++ YA+ ++
Sbjct: 423 RSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVP 482
Query: 295 GAHLCFSEIS-NKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A F +I K V+W ++I+ A +I L E+L++G +P+ T+ V +
Sbjct: 483 LARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSAC 542
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
H I G YE +L + G++ + + ++
Sbjct: 543 -------THAGFIDKGKRYYEQMLN-------EHGIVPEMSHYACMVD------------ 576
Query: 413 GIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC--AHNGDYKEVLELFKYMRAARIYP 469
+ R G E + + ++ PD V W ++AAC N D E+ + I P
Sbjct: 577 -LLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAA----EKLLSIDP 631
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
DN S L+ ++Y CG + +I
Sbjct: 632 DNSGAYSALA-----------------------------------NVYSACGRWNDAARI 656
Query: 530 FNEMTDRNV-----ITWTALISALGLNG-----------FAQRALEKFREMEFLGFKPD 572
+ D+ V +WT + S + + G ++A E + E++ GF PD
Sbjct: 657 WKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPD 715
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 143/649 (22%), Positives = 264/649 (40%), Gaps = 148/649 (22%)
Query: 48 LSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGR----HGCLDEVVSVFEDMP- 102
LS ++NP G + A +K GL + A++ LL Y R GC E +F+D+P
Sbjct: 34 LSQTAVNPSAGRAIHAHAVKAGLLVS-AYLCNNLLSYYARAGVGRGCFHEARRLFDDIPY 92
Query: 103 -RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEV------------------------ 137
R++ TWNS++S++ K G + D +F ++ +
Sbjct: 93 ARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFL 152
Query: 138 -----ALTESSFV--GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
L S F+ V+ + + G ++H VIK G + VANS++ MY +C
Sbjct: 153 DMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCG 212
Query: 191 GI-----------------WSAE--------------KMFKDVEIRDVVSWNTIIGALAE 219
W+A MF+++E R +VSWN II +
Sbjct: 213 DAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQ 272
Query: 220 SENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ AL+ + RM + + P++ T V+++CA L+ +GK +H+ +++ +
Sbjct: 273 NGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQ 332
Query: 279 VGSALVDFYAKCDNLEGAHL---------------------------------CFSEISN 305
+ +AL+ YAK ++E A F ++N
Sbjct: 333 IMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNN 392
Query: 306 KNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QL 360
+++++W A+I+GY + ++ L +++ G PN T + VL + + L Q+
Sbjct: 393 RDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQI 452
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
HC IR E V +++T YA+SG ++P A
Sbjct: 453 HCRAIRSLQEQSVSVSNAIITVYARSG------------SVPLA---------------- 484
Query: 421 YNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
++ Q+ R + V+W +I A A +G ++ + LF+ M + PD T++ + S
Sbjct: 485 ----RRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFS 540
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNV 538
AC+ + G + + I + ++D+ + G + + + M +
Sbjct: 541 ACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDT 600
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDR----VALIAVLTAC 583
+ W +L++A + A L + + L PD AL V +AC
Sbjct: 601 VVWGSLLAACRVRKNAD--LAELAAEKLLSIDPDNSGAYSALANVYSAC 647
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 195/468 (41%), Gaps = 79/468 (16%)
Query: 257 NSILGKSIHAKVIKNAL-------------------------------------ECDVFV 279
N G++IHA +K L + F
Sbjct: 40 NPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFT 99
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGY 338
++L+ YAK L A + F+++ ++ VSW +++G ++ ++++ G
Sbjct: 100 WNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGL 159
Query: 339 RPNEFTFSHVLRSSLAFQL----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
P++F ++VL S A + ++H +I++G + V S++ Y K G A A
Sbjct: 160 APSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARA 219
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
+ + R+ N + +Y G+ + + + +E IVSWN +IA NG
Sbjct: 220 VFERMKV-RSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDM 278
Query: 455 VLELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
L+ F M A+ + PD +T S+LSAC+ L L +G +H I +T + S + N L
Sbjct: 279 ALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQ-IMNAL 337
Query: 514 IDMYGKCGSIGSSVKI---------------------------------FNEMTDRNVIT 540
I Y K GS+ ++ +I F+ M +R+VI
Sbjct: 338 ISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIA 397
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
WTA+I NG A+E FR M G +P+ L AVL+AC + G ++ R
Sbjct: 398 WTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAI 457
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
RS E + + ++ + R G + A ++ + + + W + +
Sbjct: 458 RSLQ-EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMI 504
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 178/613 (29%), Positives = 285/613 (46%), Gaps = 47/613 (7%)
Query: 55 PVEGAQLQASVLKNGLFCADAFVGTALLGLYGR--HGCLDEVVSVFEDMP--RKSLVTWN 110
P G L A LK+G + A V +L+ Y L +VF+D+P + + +WN
Sbjct: 28 PRHGEALHAWALKSGA-ASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWN 86
Query: 111 SIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK- 169
S+++ H ++ L S V + SF + G H L K
Sbjct: 87 SLLNPLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKI 146
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
+ V SL+NMY + + A ++F + R+ SW+T++ A + +A +L
Sbjct: 147 PSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDL 206
Query: 230 YLRMSVDIVFPNQTTFVY--VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
+ R+ ++ ++ FV V+++ + ++G+ +H ++K+ L V V ++LV Y
Sbjct: 207 F-RLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMY 265
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFS 346
AK + A F +N ++W+A+I GYA + +++ + ++ G+ P EFTF
Sbjct: 266 AKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFV 325
Query: 347 HVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
VL +S L Q H L++++G+E YV +L+ YAK G I+DA
Sbjct: 326 GVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADA---------- 375
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
+ G QL DIV W +++ NG+++E L L+ M
Sbjct: 376 --------------KEG--------FDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARM 413
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
I P T S L AC+ + L G LH I K + V + L MY KCG+
Sbjct: 414 DKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGL-GLGAPVGSALSTMYSKCGN 472
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ + +F + DR+VI W ++IS NG AL+ F EM+ G PD + I +L A
Sbjct: 473 LEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCA 532
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
C H GLV G E F M + YG+ P +DHY C+VD+L R G LKEA+ I ++
Sbjct: 533 CSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTC 592
Query: 643 IWRTFLEGCQRCR 655
+WR L C+ R
Sbjct: 593 LWRIVLGACRSLR 605
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 223/431 (51%), Gaps = 28/431 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLLSCDS--LNPVE 57
MP RN S++++++ Y+ E+A +F M+ E ++F +LS S L +
Sbjct: 179 MPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLM 238
Query: 58 GAQLQASVLKNGLFCADAFVG--TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G Q+ ++K+GL FV +L+ +Y + GC+ VFE ++ +TW+++++
Sbjct: 239 GEQMHGLIVKDGLL---DFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITG 295
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ ++G + + +F ++ + TE +FVGV++ S+ L G+Q HGL++K GF+ +
Sbjct: 296 YAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQ 355
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V ++LV+MY +C I A++ F + D+V W ++ ++ +AL LY RM
Sbjct: 356 IYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDK 415
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ + P+++T + +CAG+ GK +H +++K L VGSAL Y+KC NLE
Sbjct: 416 EGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLED 475
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
F I ++++++WN++I G++ L E +++ G P+ TF ++L +
Sbjct: 476 GMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCAC-- 533
Query: 355 FQLLQLHCLIIRMGYENY-----EYVLGSLMTSYA-------KSGLISDALAFVTALNIP 402
H ++ G+E + +Y L + YA ++G++ +A F+ ++ I
Sbjct: 534 -----SHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITID 588
Query: 403 RAVVPANIIAG 413
I+ G
Sbjct: 589 HGTCLWRIVLG 599
>gi|218188563|gb|EEC70990.1| hypothetical protein OsI_02646 [Oryza sativa Indica Group]
Length = 952
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 170/592 (28%), Positives = 297/592 (50%), Gaps = 54/592 (9%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMI--NRGFE--PTQFTFGGLLSCDSLNPVE 57
P R+++++N+++S Y++ G +F M + G E PT+ TFG L++ L+
Sbjct: 233 PVRDLITWNALMSVYAKKGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCS 292
Query: 58 GA---QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
QL VLK+G +D +VG+AL+ + RHG LDE ++ + ++ VT N +++
Sbjct: 293 LGLLDQLFVRVLKSGC-SSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIA 351
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN----EQDLEFGEQIHGLVIKN 170
K E +F R A+ ++V ++ ++ EQ L G ++H V++
Sbjct: 352 GLVKQQHGEAAAEIFMG-ARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRA 410
Query: 171 GFDY-ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
G Y ++ V+N LVNMY +C I A ++F+ +E RD +SWNTII AL ++ A+
Sbjct: 411 GHIYRKIAVSNGLVNMYAKCGAIGKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMN 470
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
Y M + + P+ + ++SCAGL G+ +H +K L D + +ALV Y +
Sbjct: 471 YCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSISNALVKMYGE 530
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP--TSIFLLIELLQLGYRPNEFTFSH 347
C + F+ +S ++VSWN+++ AS +P S+ + +++ G PN+ TF +
Sbjct: 531 CGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVN 590
Query: 348 VLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
L + +L Q+H ++++ G V +LM+ YAKSG +
Sbjct: 591 FLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDV-------------- 636
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
+ +L S++ R D +SWN +I+ +NG +E ++ M
Sbjct: 637 ------------------DSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVWLM 678
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ D+ TF +L+AC+ + L G +H ++ + SD V + L+DMY KCG
Sbjct: 679 MLSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHL-ESDVVVESALVDMYSKCGR 737
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
I + K+F+ M+ +N +W ++IS +G ++ALE F EM+ G PD V
Sbjct: 738 IDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHV 789
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 172/680 (25%), Positives = 308/680 (45%), Gaps = 66/680 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR--GFEPTQFTFGGLL-SCDSLNPVE 57
MP RN VS+ +IS + G EDA +F M+ G PT FTFG +L +C P
Sbjct: 125 MPSRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGP-- 182
Query: 58 GAQLQASVLKNGL-----FCADAFVGTALLGLYGRHGCLDEVVS--VFEDMPRKSLVTWN 110
+L +V +GL F ++ V AL+ +YG +++ VF+ P + L+TWN
Sbjct: 183 -DRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWN 241
Query: 111 SIVSIFGKHGFVEDCMFLFCELVRS----EVALTESSFVGVIHGLS-NEQDLEFGEQIHG 165
+++S++ K G LF + E+ TE +F +I + L +Q+
Sbjct: 242 ALMSVYAKKGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFV 301
Query: 166 LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
V+K+G +L V ++LV+ + + + A+ ++ ++ R+ V+ N +I L + ++
Sbjct: 302 RVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEA 361
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGL----QNSILGKSIHAKVIKNA-LECDVFVG 280
A E+++ + D N T+V ++++ A Q G+ +HA V++ + + V
Sbjct: 362 AAEIFMG-ARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVS 420
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYR 339
+ LV+ YAKC + A F + ++ +SWN +I + + L+ Q
Sbjct: 421 NGLVNMYAKCGAIGKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIG 480
Query: 340 PNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
P+ F L S LL QLHC ++ G Y+ S+
Sbjct: 481 PSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGL----YLDTSI---------------- 520
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN-GDYKE 454
+N + +Y G+ +E ++ + + D+VSWN ++ A + E
Sbjct: 521 ------------SNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITE 568
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
+++F M + + P+ TFV+ L+A + L L LG +H ++ K ++ D V N L+
Sbjct: 569 SVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLK-HGVTEDNAVDNALM 627
Query: 515 DMYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
Y K G + S ++F+ M+ R+ I+W ++IS NG Q A++ M D
Sbjct: 628 SCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVWLMMLSEQMMDH 687
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
VL AC + GME+ RS+ +E ++ +VD+ + G + A K+
Sbjct: 688 CTFSIVLNACASVAALERGMEMHAFGLRSH-LESDVVVESALVDMYSKCGRIDYASKVFH 746
Query: 634 TMPFPPNALIWRTFLEGCQR 653
+M N W + + G R
Sbjct: 747 SMS-QKNEFSWNSMISGYAR 765
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 149/603 (24%), Positives = 269/603 (44%), Gaps = 40/603 (6%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L ++K GL D F+ L+ Y + LD VF+ MP ++ V+W ++S G
Sbjct: 86 LHLEIVKRGL-THDLFLANHLVNSYAKGARLDAARGVFDGMPSRNAVSWTCLISGHVLSG 144
Query: 121 FVEDCMFLFCELVRSEVALTESSFV--GVIHGL--SNEQDLEFGEQIHGLVIKNGFDYEL 176
ED LF ++R +SF V+ S L F Q+HGLV K F
Sbjct: 145 LPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNT 204
Query: 177 LVANSLVNMYFQCA--GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V N+L++MY C+ A+++F +RD+++WN ++ A+ + L+ M
Sbjct: 205 TVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKKGDAICTFTLFRAMQ 264
Query: 235 VDI----VFPNQTTFVYVINSCAGLQNSILG--KSIHAKVIKNALECDVFVGSALVDFYA 288
D + P + TF +I + L + LG + +V+K+ D++VGSALV +A
Sbjct: 265 YDDSGIELRPTEHTFGSLITATY-LSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFA 323
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
+ L+ A + + +N V+ N LI G + + + + N T+ +
Sbjct: 324 RHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVL 383
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
L + F + +R G E + +VL A +I R + +
Sbjct: 384 LSAIAEFSTAEQG---LRKGREVHAHVL--------------------RAGHIYRKIAVS 420
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N + +Y + G + ++ +E D +SWN +I A NG + + + MR I
Sbjct: 421 NGLVNMYAKCGAIGKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIG 480
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P N+ +S LS+C+ L LA G LH K + DT + N L+ MYG+CG + +
Sbjct: 481 PSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLY-LDTSISNALVKMYGECGRMSECWE 539
Query: 529 IFNEMTDRNVITWTALISALGLNGFA-QRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
IFN M+ +V++W +++ + + +++ F M G P++V + L A
Sbjct: 540 IFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLS 599
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
++ G ++ M + +GV + + ++ + G + E++ + M +A+ W +
Sbjct: 600 VLELGKQIHSVMLK-HGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSM 658
Query: 648 LEG 650
+ G
Sbjct: 659 ISG 661
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 199/456 (43%), Gaps = 55/456 (12%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
E +H ++K G ++L +AN LVN Y + A + +A +F + R+ VSW +I S
Sbjct: 84 ESLHLEIVKRGLTHDLFLANHLVNSYAKGARLDAARGVFDGMPSRNAVSWTCLISGHVLS 143
Query: 221 ENFGKALELYLRMSVD--IVFPNQTTFVYVINSCAGLQNSILG--KSIHAKVIKNALECD 276
A L+ M + P TF V+ +C LG +H V K +
Sbjct: 144 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 203
Query: 277 VFVGSALVDFYAKCDNLEG--AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
V +AL+ Y C A F +++++WNAL+ YA K F L +
Sbjct: 204 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKKGDAICTFTLFRAM 263
Query: 335 Q-----LGYRPNEFTFSHVLR----SSLAFQLL-QLHCLIIRMGYENYEYVLGSLMTSYA 384
Q + RP E TF ++ SS + LL QL +++ G + YV +L++++A
Sbjct: 264 QYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFA 323
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
+ G++ +A L AV +IAG+ + Q+ E
Sbjct: 324 RHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQ--QHGEAAA------------------ 363
Query: 445 ACAHNGDYKEVLELFKYMR-AARIYPDNYTFVSLLSACSKLCN----LALGSSLHGLIKK 499
E+F R +A + D T+V LLSA ++ L G +H + +
Sbjct: 364 ------------EIFMGARDSAAVNVD--TYVVLLSAIAEFSTAEQGLRKGREVHAHVLR 409
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
I V N L++MY KCG+IG + ++F M R+ I+W +I+AL NG+ + A+
Sbjct: 410 AGHIYRKIAVSNGLVNMYAKCGAIGKACRVFQLMEARDRISWNTIITALDQNGYCEAAMM 469
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+ M P A I+ L++C GL+ G +L
Sbjct: 470 NYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQL 505
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 133/254 (52%), Gaps = 9/254 (3%)
Query: 1 MPDRNVVSFNSIISAY-SRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE-- 57
M +VVS+NSI+ S + +++++F M+ G P + TF L+ +L P+
Sbjct: 544 MSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLA--ALTPLSVL 601
Query: 58 --GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVS 114
G Q+ + +LK+G+ D V AL+ Y + G +D +F M R+ ++WNS++S
Sbjct: 602 ELGKQIHSVMLKHGV-TEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMIS 660
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ +G +++ M ++ SE + +F V++ ++ LE G ++H +++ +
Sbjct: 661 GYIYNGHLQEAMDCVWLMMLSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLES 720
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+++V ++LV+MY +C I A K+F + ++ SWN++I A KALE++ M
Sbjct: 721 DVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQ 780
Query: 235 VDIVFPNQTTFVYV 248
P+ TF +
Sbjct: 781 ESGESPDHVTFFHA 794
>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial [Vitis vinifera]
Length = 828
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 180/610 (29%), Positives = 301/610 (49%), Gaps = 47/610 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEGAQL 61
R+V+ +N++I+A A+ +F+ ++ G T ++S S N +G L
Sbjct: 36 RDVILWNAMITASVENQCFGVAVNLFVELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVL 95
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
K GL +D+F+ AL+ +Y + G L VF M + +++WNS++ + +
Sbjct: 96 HGISFKTGLL-SDSFLCNALIDMYAKCGELSSSECVFGGMEYRDIISWNSMMRGCAYNNY 154
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD--YELLVA 179
+ ++ F ++ S S + + +L FG+ IHG IK G+
Sbjct: 155 PKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIKLGYKDISHNSFE 214
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS-VDIV 238
NSL+++Y QC I +AE +FK+++ +D+VSWN ++ LA ++ +A +L M + V
Sbjct: 215 NSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCV 274
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T V +I CA L G+++H ++ + D V ++L+D Y+KC +++ A
Sbjct: 275 QPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEH 334
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F I +++VSWNA+I GY+ S + L +LLQ + + T +L S + +
Sbjct: 335 VFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEF 394
Query: 358 LQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
LQ +HC +++G+ N + SLM Y G D +A + L A
Sbjct: 395 LQFGESIHCWQLKLGFANNPLAVNSLMLMYINCG---DLVACFSLLQTVSAAA------- 444
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA-ARIYPDNY 472
DIV WN V+A C NG + E L+ F MR + D+
Sbjct: 445 ---------------------DIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSV 483
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+++SAC L L G SLHGL KT ++ SD V N LI MYG+CG I ++ IF
Sbjct: 484 ALFNVISACGNLELLFAGGSLHGLALKT-LMESDIRVQNALITMYGRCGEIENARIIFGF 542
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+RN+ +W +ISA N +RALE F +E F+P+ + ++ +L+AC G++R G
Sbjct: 543 SCNRNLCSWNCMISAFSQNKDGRRALELFCHIE---FEPNEITIVGILSACTQLGVLRHG 599
Query: 593 MELFERMNRS 602
++ + RS
Sbjct: 600 KQIHGHVIRS 609
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 158/585 (27%), Positives = 272/585 (46%), Gaps = 52/585 (8%)
Query: 79 TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVA 138
+L+ LY + + +F++M K +V+WN+++ + + + L E+
Sbjct: 215 NSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCV 274
Query: 139 LTESSFVGVIHGLSNE-QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEK 197
+S V +I L E L G +HGL ++ + V NSL++MY +C + AE
Sbjct: 275 QPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEH 334
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQN 257
+FK + RD+VSWN +I +++ + +A L+ ++ + +T + ++ SC +
Sbjct: 335 VFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEF 394
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN----KNIVSWNA 313
G+SIH +K + ++L+ Y C +L CFS + +IV WN
Sbjct: 395 LQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDLVA---CFSLLQTVSAAADIVCWNT 451
Query: 314 LILGYASKSSPTSIFLLIELLQLGYR--PNEFTFSHVLRSSLAFQLL----QLHCLIIRM 367
++ G L++ + +V+ + +LL LH L ++
Sbjct: 452 VMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKT 511
Query: 368 GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY-NRTGQYNETVK 426
E+ V +L+T Y + G I +A II G NR
Sbjct: 512 LMESDIRVQNALITMYGRCGEIENA----------------RIIFGFSCNR--------- 546
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
++ SWN +I+A + N D + LELF ++ P+ T V +LSAC++L
Sbjct: 547 --------NLCSWNCMISAFSQNKDGRRALELFCHIE---FEPNEITIVGILSACTQLGV 595
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L G +HG + ++ + ++FV L DMY CG + ++ +IF +R+V W ++IS
Sbjct: 596 LRHGKQIHGHVIRSRL-QGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMIS 654
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
A G + +A+E F EM G +P + I++L+AC H GLV EG+ + M + VE
Sbjct: 655 AFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEGLWYYSNMLELFNVE 714
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ +H+ C+VD+L R G L EA + I MP P +W L C
Sbjct: 715 ADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSAC 759
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 239/510 (46%), Gaps = 45/510 (8%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D V +L+ +Y + + VF+ +P + LV+WN+++S + ++G + LF +L+
Sbjct: 312 DFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQLL 371
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
+S + S+ + ++ + + L+FGE IH +K GF L NSL+ MY C +
Sbjct: 372 QSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDLV 431
Query: 194 SAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELY--LRMSVDIVFPNQTTFVYVIN 250
+ + + V D+V WNT++ ++ +F +AL+ + +R D+ + F VI+
Sbjct: 432 ACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALF-NVIS 490
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+C L+ G S+H +K +E D+ V +AL+ Y +C +E A + F N+N+ S
Sbjct: 491 ACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCS 550
Query: 311 WNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYE 370
WN +I ++ L + + PNE T +L + +L R G +
Sbjct: 551 WNCMISAFSQNKDGRRALEL--FCHIEFEPNEITIVGILSACTQLGVL-------RHGKQ 601
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+ +V+ S + +FV+A + +Y+ G+ + ++
Sbjct: 602 IHGHVIRSRLQGN----------SFVSA-----------ALEDMYSNCGRLDTAFQIFQS 640
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+ +WN +I+A + + + +ELF MR P TF+SLLSACS + G
Sbjct: 641 SPERSVAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEG 700
Query: 491 SSLHGLIKKTEIISSDT--FVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISA 547
+ + + + +DT VC ++DM G+ G +G + + +M T W AL+SA
Sbjct: 701 LWYYSNMLELFNVEADTEHHVC--MVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSA 758
Query: 548 LGLNGFAQRALEKFREMEFLGF--KPDRVA 575
+G L+ RE+ L F +P+ V
Sbjct: 759 CSYHG----DLKMGREVAELLFELEPENVG 784
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 224/485 (46%), Gaps = 38/485 (7%)
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
L + SL+ Y + A S+ +F ++ RDV+ WN +I A E++ FG A+ L++ +
Sbjct: 6 HLPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELM 65
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ V + TT + V+++ + + N G+ +H K L D F+ +AL+D YAKC L
Sbjct: 66 GEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELS 125
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
+ F + ++I+SWN+++ G A + P S++ ++ + + + + + +S
Sbjct: 126 SSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASA 185
Query: 354 AFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
L +H I++GY++ + S+ S LIS
Sbjct: 186 LLGELSFGQVIHGWGIKLGYKDISH------NSFENS-LIS------------------- 219
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR-AARIY 468
+Y++ L +++ DIVSWN ++ A N E +L M+ +
Sbjct: 220 ----LYSQCRDIQAAEILFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQ 275
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD+ T V ++ C++L L G ++HGL + E + D V N LIDMY KC + +
Sbjct: 276 PDSVTVVIIIPLCAELMLLREGRAVHGLTLRRE-MGLDFSVTNSLIDMYSKCKDVKRAEH 334
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F + +R++++W A+IS NG ++ A FR++ + L+A+L +C
Sbjct: 335 VFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEF 394
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
++ G E G + ++ + + G L ++ T+ + + W T +
Sbjct: 395 LQFG-ESIHCWQLKLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVM 453
Query: 649 EGCQR 653
GC +
Sbjct: 454 AGCTQ 458
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 232/473 (49%), Gaps = 50/473 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P+R++VS+N++IS YS+ G+ +A +F ++ + + T +L SCDS ++ G
Sbjct: 339 IPERDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFG 398
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS-LVTWNSIVSIFG 117
+ LK G F + +L+ +Y G L S+ + + + +V WN++++
Sbjct: 399 ESIHCWQLKLG-FANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCT 457
Query: 118 KHGFVEDCMFLFCELVRSEVALTESS--FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
++G + + F L+R + + S VI N + L G +HGL +K + +
Sbjct: 458 QNGHFWEALKAF-NLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESD 516
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V N+L+ MY +C I +A +F R++ SWN +I A +++++ +ALEL+ +
Sbjct: 517 IRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALELFCHIEF 576
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ PN+ T V ++++C L GK IH VI++ L+ + FV +AL D Y+ C L+
Sbjct: 577 E---PNEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDT 633
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F +++ +WN++I + S+ +I L E+ + G RP + TF
Sbjct: 634 AFQIFQSSPERSVAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFI-------- 685
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL----NIPRAVVPANI 410
SL+++ + SGL+++ L + + + N+
Sbjct: 686 -----------------------SLLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVC 722
Query: 411 IAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYK---EVLELF 459
+ + R G+ E + + Q+ +P+ W +++AC+++GD K EV EL
Sbjct: 723 MVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSACSYHGDLKMGREVAELL 775
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 133/618 (21%), Positives = 268/618 (43%), Gaps = 67/618 (10%)
Query: 79 TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVA 138
T+LL Y R ++F+++ + ++ WN++++ ++ + LF EL+ V
Sbjct: 11 TSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEGVG 70
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
L ++ + V+ S+ +L G +HG+ K G + + N+L++MY +C + S+E +
Sbjct: 71 LDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECV 130
Query: 199 FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
F +E RD++SWN+++ A + K+L + +M+ + + +++ A L
Sbjct: 131 FGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGEL 190
Query: 259 ILGKSIHAKVIKNALECDVFVGS---ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
G+ IH IK + D+ S +L+ Y++C +++ A + F E+ K+IVSWNA++
Sbjct: 191 SFGQVIHGWGIKLGYK-DISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAML 249
Query: 316 LGYASKSSPTSIFLLIELLQL--GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE 373
G A F L+ +QL +P+ T V+ L +L+ L
Sbjct: 250 DGLALNQRIWEAFDLLHEMQLLGCVQPDSVTV--VIIIPLCAELMLL------------- 294
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
+ G L + + +V N + +Y++ + +
Sbjct: 295 -----------REGRAVHGLTLRREMGLDFSVT--NSLIDMYSKCKDVKRAEHVFKAIPE 341
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
D+VSWN +I+ + NG +E LF+ + + T +++L +C L G S+
Sbjct: 342 RDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESI 401
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG 552
H K +++ N L+ MY CG + + + ++ +++ W +++ NG
Sbjct: 402 HCWQLKLG-FANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNG 460
Query: 553 FAQRALEKFREM-EFLGFKPDRVALIAVLTACR-----------HGGLVREGMELFERMN 600
AL+ F M + D VAL V++AC HG ++ ME R+
Sbjct: 461 HFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQ 520
Query: 601 RS----YGVEPEMDH---------------YHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
+ YG E+++ ++C++ + + A ++ + F PN
Sbjct: 521 NALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALELFCHIEFEPNE 580
Query: 642 LIWRTFLEGCQRCRIAKY 659
+ L C + + ++
Sbjct: 581 ITIVGILSACTQLGVLRH 598
>gi|147791119|emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
Length = 677
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 168/534 (31%), Positives = 278/534 (52%), Gaps = 24/534 (4%)
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF + + L+ +L S V + +F ++ + G+ +H +IK GF ++
Sbjct: 71 NGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYA 130
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
A +L +MY + + A K+F+++ R++ S N I + + F +AL + ++ +
Sbjct: 131 ATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNF 190
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T V+ +CA ++ L +H IK +E D++V +A+V Y+ C L A
Sbjct: 191 RPNSVTIASVLPACASVE---LDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKK 247
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F +I +KN+VS+NA I G +P +F + +LL+ G PN T +L S +
Sbjct: 248 VFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSIL--SACSK 305
Query: 357 LL------QLHCLIIRMGYENYEYVLGS-LMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
LL Q+H L++++ N++ ++G+ L+ Y+K G A L+ R +V N
Sbjct: 306 LLYIRFGRQIHGLVVKIEI-NFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWN 364
Query: 410 -IIAGIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+IAG+ GQ + V+L QLE PD +WN +I+ + G E + F M++
Sbjct: 365 SMIAGMM-LNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQS 423
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
A + + SLL ACS L L G +HG +T I +D F+ LIDMY KCG
Sbjct: 424 AGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNI-DTDEFISTALIDMYMKCGHSY 482
Query: 525 SSVKIFNE--MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ ++F + + + W A+IS G NG Q A E F +M+ +P+ L+++L+
Sbjct: 483 LARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSV 542
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
C H G + G +LF+ MNR YG+ P +H+ C+VDLL R G LKEA+++I MP
Sbjct: 543 CSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMP 596
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 144/564 (25%), Positives = 272/564 (48%), Gaps = 36/564 (6%)
Query: 7 VSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LN-PVEGAQLQAS 64
+S I+ G+ +AL ++ + + +FTF LL + LN P++G L
Sbjct: 59 ISMKRDIAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQ 118
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
++K G F D + TAL +Y + L + VFE+MP ++L + N +S F ++G+ +
Sbjct: 119 LIKTG-FHLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFRE 177
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ F ++ + V+ ++ +E Q+H L IK G + ++ VA ++V
Sbjct: 178 ALGAFKQVGLGNFRPNSVTIASVLPACAS---VELDGQVHCLAIKLGVESDIYVATAVVT 234
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV-----F 239
MY C + A+K+F + ++VVS+N I L ++ A L + D++
Sbjct: 235 MYSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQN----GAPHLVFDVFKDLLESSGEV 290
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN T V ++++C+ L G+ IH V+K + D VG+ALVD Y+KC A+
Sbjct: 291 PNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGI 350
Query: 300 FSEIS-NKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQ 356
F E+S ++N+V+WN++I G + S ++ L +L G P+ T++ ++ S Q
Sbjct: 351 FIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQ 410
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI------ 410
+++ +M V+ SL + + S A + I + NI
Sbjct: 411 VVEAFKFFHKMQSAG---VIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFI 467
Query: 411 ---IAGIYNRTGQYNETVKLLSQLE-RPDIVS-WNIVIAACAHNGDYKEVLELFKYMRAA 465
+ +Y + G ++ Q + +PD + WN +I+ NG Y+ E+F M+
Sbjct: 468 STALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEE 527
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSI 523
++ P++ T VS+LS CS + G L ++ + + +S+ F C ++D+ G+ G +
Sbjct: 528 KVQPNSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGC--MVDLLGRSGRL 585
Query: 524 GSSVKIFNEMTDRNVITWTALISA 547
+ ++ +EM + +V + +L+ A
Sbjct: 586 KEAQELIHEMPEASVSVFASLLGA 609
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 200/402 (49%), Gaps = 38/402 (9%)
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
+S I L + + +AL LY ++ V ++ TF +++ + A L + + G+ +H +
Sbjct: 59 ISMKRDIAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQ 118
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSI 327
+IK D++ +AL D Y K L A F E+ ++N+ S N I G++
Sbjct: 119 LIKTGFHLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREA 178
Query: 328 FLLIELLQLG-YRPNEFTFSHVLRSSLAFQLL-QLHCLIIRMGYENYEYVLGSLMTSYAK 385
+ + LG +RPN T + VL + + +L Q+HCL I++G E+ YV
Sbjct: 179 LGAFKQVGLGNFRPNSVTIASVLPACASVELDGQVHCLAIKLGVESDIYV---------- 228
Query: 386 SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA 445
A A VT +Y+ G+ K+ Q+ ++VS+N I+
Sbjct: 229 ------ATAVVT----------------MYSNCGELVLAKKVFDQILDKNVVSYNAFISG 266
Query: 446 CAHNGDYKEVLELFK-YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
NG V ++FK + ++ P++ T VS+LSACSKL + G +HGL+ K E I+
Sbjct: 267 LLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIE-IN 325
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFRE 563
DT V L+DMY KCG + IF E++ RN++TW ++I+ + LNG + A+E F +
Sbjct: 326 FDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQ 385
Query: 564 MEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
+E G +PD +++ G V E + F +M +S GV
Sbjct: 386 LEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKM-QSAGV 426
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 125/511 (24%), Positives = 219/511 (42%), Gaps = 58/511 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP RN+ S N IS +SR GY +AL F + F P T +L + ++G Q
Sbjct: 154 MPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNSVTIASVLPACASVELDG-Q 212
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ +K G+ +D +V TA++ +Y G L VF+ + K++V++N+ +S ++G
Sbjct: 213 VHCLAIKLGVE-SDIYVATAVVTMYSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQNG 271
Query: 121 FVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+F +L+ S + S + V ++ S + FG QIHGLV+K +++ +V
Sbjct: 272 APHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVG 331
Query: 180 NSLVNMYFQCAGIWS---------------------------------AEKMFKDVEIR- 205
+LV+MY +C G W A ++F+ +E
Sbjct: 332 TALVDMYSKC-GCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEG 390
Query: 206 ---DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
D +WNT+I ++ +A + + +M V + + ++ +C+ L GK
Sbjct: 391 LEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGK 450
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDN--LEGAHLCFSEISNKNIVSWNALILGYAS 320
IH I+ ++ D F+ +AL+D Y KC + L C +I + WNA+I GY
Sbjct: 451 EIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGR 510
Query: 321 KSSPTSIFLLIELLQ-LGYRPNEFTF-------SHVLRSSLAFQLLQLHCLIIRMGYENY 372
S F + +Q +PN T SH +QL ++ + G
Sbjct: 511 NGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKM--MNRDYGLNPT 568
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY--NETVKLLSQ 430
G ++ +SG + +A + + V A+++ + + E K LS+
Sbjct: 569 SEHFGCMVDLLGRSGRLKEAQELIHEMPEASVSVFASLLGACRHHSDSALGEEMAKKLSE 628
Query: 431 LERPDIVSWNI---VIAACAHNGDYKEVLEL 458
LE D + I + A GD + V E+
Sbjct: 629 LEPQDPTPFVILSNIYAVQGRWGDVERVREM 659
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 169/582 (29%), Positives = 273/582 (46%), Gaps = 42/582 (7%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR-S 135
+G A L ++ R G L + VF M ++L +WN +V + K G+ ++ M L+ ++
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
V +F V+ DL G+++H V++ G++ ++ V N+L+ MY +C + SA
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
+F + RD++SWN +I E+ + LEL+ M V P+ T VI++C L
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
+ LG+ IHA VI D+ V ++L Y + A FS + K+IVSW +I
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 316 LGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYE 370
GY P ++ Q +P+E T + VL + L +LH L I+
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+Y V +L+ Y+K I AL NIP
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFH--NIP---------------------------- 460
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
R +++SW +IA N E L + M+ + P+ T + L+AC+++ L G
Sbjct: 461 --RKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCG 517
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+H + +T + D F+ N L+DMY +CG + ++ FN ++V +W L++
Sbjct: 518 KEIHAHVLRTGV-GLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSE 575
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
G +E F M +PD + I++L C +VR+G+ F +M YGV P +
Sbjct: 576 RGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNLK 634
Query: 611 HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
HY CVVDLL R G L+EA K I MP P+ +W L C+
Sbjct: 635 HYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACR 676
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 145/557 (26%), Positives = 265/557 (47%), Gaps = 47/557 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI-NRGFEPTQFTFGGLL-SCDSL-NPVE 57
M +RN+ S+N ++ Y++ GY ++A+ ++ M+ G +P +TF +L +C + +
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ V++ G + D V AL+ +Y + G + +F+ MPR+ +++WN+++S +
Sbjct: 215 GKEVHVHVVRYG-YELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G + + LF + V + VI D G IH VI GF ++
Sbjct: 274 ENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 178 VANSLVNMYFQCAGIW-SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V NSL MY AG W AEK+F +E +D+VSW T+I + KA++ Y M D
Sbjct: 334 VCNSLTQMYLN-AGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD 392
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P++ T V+++CA L + G +H IK L V V + L++ Y+KC ++ A
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA 452
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F I KN++SW ++I G + + + +++ +PN T + L +
Sbjct: 453 LDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIG 512
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L ++H ++R G +++ +L+ Y + G ++ A +
Sbjct: 513 ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWS------------------ 554
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
Q+N ++ D+ SWNI++ + G V+ELF M +R+ PD
Sbjct: 555 -------QFNS--------QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEI 599
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+SLL CSK + G ++ + + + C ++D+ G+ G + + K
Sbjct: 600 TFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYAC--VVDLLGRAGELQEAHKFIQ 657
Query: 532 EM-TDRNVITWTALISA 547
+M + W AL++A
Sbjct: 658 KMPVTPDPAVWGALLNA 674
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 145/512 (28%), Positives = 254/512 (49%), Gaps = 33/512 (6%)
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G +E+ M L + VA+ E FV ++ ++ E G +++ + + + + +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDI 237
N+ + M+ + + A +F + R++ SWN ++G A+ F +A+ LY RM V
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ TF V+ +C G+ + GK +H V++ E D+ V +AL+ Y KC +++ A
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
L F + ++I+SWNA+I GY + L + L P+ T + V+ A +
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS---ACE 308
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
LL R+G + + YV+ + F +++ N + +Y
Sbjct: 309 LLGDR----RLGRDIHAYVITT---------------GFAVDISV------CNSLTQMYL 343
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
G + E KL S++ER DIVSW +I+ +N + ++ ++ M + PD T +
Sbjct: 344 NAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAA 403
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+LSAC+ L +L G LH L K +IS V N LI+MY KC I ++ IF+ + +
Sbjct: 404 VLSACATLGDLDTGVELHKLAIKARLISY-VIVANNLINMYSKCKCIDKALDIFHNIPRK 462
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
NVI+WT++I+ L LN AL R+M+ + +P+ + L A L AC G + G E+
Sbjct: 463 NVISWTSIIAGLRLNNRCFEALIFLRQMK-MTLQPNAITLTAALAACARIGALMCGKEIH 521
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
+ R+ GV + + ++D+ VR G + A
Sbjct: 522 AHVLRT-GVGLDDFLPNALLDMYVRCGRMNTA 552
>gi|225424928|ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
[Vitis vinifera]
gi|296086418|emb|CBI32007.3| unnamed protein product [Vitis vinifera]
Length = 617
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 168/534 (31%), Positives = 278/534 (52%), Gaps = 24/534 (4%)
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+GF + + L+ +L S V + +F ++ + G+ +H +IK GF ++
Sbjct: 11 NGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYA 70
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
A +L +MY + + A K+F+++ R++ S N I + + F +AL + ++ +
Sbjct: 71 ATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNF 130
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T V+ +CA ++ L +H IK +E D++V +A+V Y+ C L A
Sbjct: 131 RPNSVTIASVLPACASVE---LDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKK 187
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F +I +KN+VS+NA I G +P +F + +LL+ G PN T +L S +
Sbjct: 188 VFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSIL--SACSK 245
Query: 357 LL------QLHCLIIRMGYENYEYVLGS-LMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
LL Q+H L++++ N++ ++G+ L+ Y+K G A L+ R +V N
Sbjct: 246 LLYIRFGRQIHGLVVKIEI-NFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWN 304
Query: 410 -IIAGIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+IAG+ GQ + V+L QLE PD +WN +I+ + G E + F M++
Sbjct: 305 SMIAGMM-LNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQS 363
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
A + + SLL ACS L L G +HG +T I +D F+ LIDMY KCG
Sbjct: 364 AGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNI-DTDEFISTALIDMYMKCGHSY 422
Query: 525 SSVKIFNE--MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ ++F + + + W A+IS G NG Q A E F +M+ +P+ L+++L+
Sbjct: 423 LARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSV 482
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
C H G + G +LF+ MNR YG+ P +H+ C+VDLL R G LKEA+++I MP
Sbjct: 483 CSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMP 536
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 141/549 (25%), Positives = 269/549 (48%), Gaps = 32/549 (5%)
Query: 20 GYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LN-PVEGAQLQASVLKNGLFCADAFV 77
G+ +AL ++ + + +FTF LL + LN P++G L ++K G F D +
Sbjct: 12 GFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTG-FHLDIYA 70
Query: 78 GTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEV 137
TAL +Y + L + VFE+MP ++L + N +S F ++G+ + + F ++
Sbjct: 71 ATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNF 130
Query: 138 ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEK 197
+ V+ ++ +E Q+H L IK G + ++ VA ++V MY C + A+K
Sbjct: 131 RPNSVTIASVLPACAS---VELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKK 187
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELY---LRMSVDIVFPNQTTFVYVINSCAG 254
+F + ++VVS+N I L ++ +++ L S ++ PN T V ++++C+
Sbjct: 188 VFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEV--PNSVTLVSILSACSK 245
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS-NKNIVSWNA 313
L G+ IH V+K + D VG+ALVD Y+KC A+ F E+S ++N+V+WN+
Sbjct: 246 LLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNS 305
Query: 314 LILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQLLQLHCLIIRMGYEN 371
+I G + S ++ L +L G P+ T++ ++ S Q+++ +M
Sbjct: 306 MIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAG 365
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI---------IAGIYNRTGQYN 422
V+ SL + + S A + I + NI + +Y + G
Sbjct: 366 ---VIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSY 422
Query: 423 ETVKLLSQLE-RPDIVS-WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
++ Q + +PD + WN +I+ NG Y+ E+F M+ ++ P++ T VS+LS
Sbjct: 423 LARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSV 482
Query: 481 CSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
CS + G L ++ + + +S+ F C ++D+ G+ G + + ++ +EM + +V
Sbjct: 483 CSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGC--MVDLLGRSGRLKEAQELIHEMPEASV 540
Query: 539 ITWTALISA 547
+ +L+ A
Sbjct: 541 SVFASLLGA 549
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 198/396 (50%), Gaps = 38/396 (9%)
Query: 214 IGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
I L + + +AL LY ++ V ++ TF +++ + A L + + G+ +H ++IK
Sbjct: 5 IAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGF 64
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL 333
D++ +AL D Y K L A F E+ ++N+ S N I G++ +
Sbjct: 65 HLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQ 124
Query: 334 LQLG-YRPNEFTFSHVLRSSLAFQLL-QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
+ LG +RPN T + VL + + +L Q+HCL I++G E+ YV
Sbjct: 125 VGLGNFRPNSVTIASVLPACASVELDGQVHCLAIKLGVESDIYV---------------- 168
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
A A VT +Y+ G+ K+ Q+ ++VS+N I+ NG
Sbjct: 169 ATAVVT----------------MYSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQNGA 212
Query: 452 YKEVLELFK-YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
V ++FK + ++ P++ T VS+LSACSKL + G +HGL+ K E I+ DT V
Sbjct: 213 PHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIE-INFDTMVG 271
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
L+DMY KCG + IF E++ RN++TW ++I+ + LNG + A+E F ++E G
Sbjct: 272 TALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGL 331
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
+PD +++ G V E + F +M +S GV
Sbjct: 332 EPDSATWNTMISGFSQQGQVVEAFKFFHKM-QSAGV 366
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 125/511 (24%), Positives = 219/511 (42%), Gaps = 58/511 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP RN+ S N IS +SR GY +AL F + F P T +L + ++G Q
Sbjct: 94 MPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNSVTIASVLPACASVELDG-Q 152
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ +K G+ +D +V TA++ +Y G L VF+ + K++V++N+ +S ++G
Sbjct: 153 VHCLAIKLGVE-SDIYVATAVVTMYSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQNG 211
Query: 121 FVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+F +L+ S + S + V ++ S + FG QIHGLV+K +++ +V
Sbjct: 212 APHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVG 271
Query: 180 NSLVNMYFQCAGIWS---------------------------------AEKMFKDVEIR- 205
+LV+MY +C G W A ++F+ +E
Sbjct: 272 TALVDMYSKC-GCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEG 330
Query: 206 ---DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
D +WNT+I ++ +A + + +M V + + ++ +C+ L GK
Sbjct: 331 LEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGK 390
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDN--LEGAHLCFSEISNKNIVSWNALILGYAS 320
IH I+ ++ D F+ +AL+D Y KC + L C +I + WNA+I GY
Sbjct: 391 EIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGR 450
Query: 321 KSSPTSIFLLIELLQ-LGYRPNEFTF-------SHVLRSSLAFQLLQLHCLIIRMGYENY 372
S F + +Q +PN T SH +QL ++ + G
Sbjct: 451 NGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKM--MNRDYGLNPT 508
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY--NETVKLLSQ 430
G ++ +SG + +A + + V A+++ + + E K LS+
Sbjct: 509 SEHFGCMVDLLGRSGRLKEAQELIHEMPEASVSVFASLLGACRHHSDSALGEEMAKKLSE 568
Query: 431 LERPDIVSWNI---VIAACAHNGDYKEVLEL 458
LE D + I + A GD + V E+
Sbjct: 569 LEPQDPTPFVILSNIYAVQGRWGDVERVREM 599
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/418 (33%), Positives = 223/418 (53%), Gaps = 32/418 (7%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC-----FSEISNKNIVSWNALIL 316
K IH++ IK + C+ + + ++ F C + E +C F I ++ SWN +
Sbjct: 31 KQIHSRTIKTGIICNPIIQNKILSF---CCSREFGDMCYARQLFDTIPEPSVFSWNIMFK 87
Query: 317 GYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS---SLAFQL-LQLHCLIIRMGYEN 371
GY+ + P + L +E+L+ +P+ +T+ + + S+A QL +LHC +++ G ++
Sbjct: 88 GYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDS 147
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR-------------- 417
+ +L+ Y+ GLI D + ++ VV N + YNR
Sbjct: 148 NVFAHNALINMYSLCGLI-DMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTG 206
Query: 418 ---TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
TGQ + K ++ D VSW +I YKE L LF+ M+ ++I PD +T
Sbjct: 207 FVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTM 266
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
VS+L+AC++L L LG + I K ++ +DTFV N LIDMY KCG++ ++ IFN +
Sbjct: 267 VSVLTACAQLGALELGEWIRTYIDKNKV-KNDTFVGNALIDMYFKCGNVEMALSIFNTLP 325
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
R+ TWTA++ L +NG + AL F +M PD V + VL+AC H G+V EG +
Sbjct: 326 QRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKK 385
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M +G+EP + HY C+VDLL + GHLKEA +II MP PN+++W L C+
Sbjct: 386 FFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACR 443
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 190/437 (43%), Gaps = 37/437 (8%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCA----GIWSAEKMFKDVEIRDVVSWNTIIGA 216
+QIH IK G ++ N +++ F C+ + A ++F + V SWN +
Sbjct: 31 KQIHSRTIKTGIICNPIIQNKILS--FCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKG 88
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI---LGKSIHAKVIKNAL 273
+ + LYL M V P+ T+ ++ G S+ LG+ +H V+K L
Sbjct: 89 YSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFK---GFTRSVALQLGRELHCHVVKYGL 145
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY--ASKSSPTSIFLLI 331
+ +VF +AL++ Y+ C ++ A F ++V+WNA+I GY K + ++
Sbjct: 146 DSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVT 205
Query: 332 ELLQLG-------YRPNEFTFSHVLRSSLAFQLLQLHC-----LIIR----MGYENYEYV 375
+ G Y HV +++ L+L+C ++ R + E+
Sbjct: 206 GFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFT 265
Query: 376 LGSLMTSYAKSGLISDA---LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
+ S++T+ A+ G + ++ + N + +Y + G + + + L
Sbjct: 266 MVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLP 325
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
+ D +W ++ A NG +E L +F M A + PD T+V +LSAC+ + G
Sbjct: 326 QRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKK 385
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLN 551
+ I + ++D+ GK G + + +I M + N I W AL+ A ++
Sbjct: 386 FFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIH 445
Query: 552 G---FAQRALEKFREME 565
A+RA+E+ E+E
Sbjct: 446 KDAEMAERAIEQILELE 462
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 178/448 (39%), Gaps = 88/448 (19%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRH-GCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + +K G+ C L R G + +F+ +P S+ +WN + + +
Sbjct: 32 QIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYSR 91
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + L+ E++ V ++ + G + L+ G ++H V+K G D +
Sbjct: 92 IACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFA 151
Query: 179 ANSLVNMYFQCAGI----------------------------------WSA--------- 195
N+L+NMY C I W+A
Sbjct: 152 HNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTG 211
Query: 196 -----EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
K F + RD VSW +I + +AL L+ M + P++ T V V+
Sbjct: 212 QVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLT 271
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+CA L LG+ I + KN ++ D FVG+AL+D Y KC N+E A F+ + ++ +
Sbjct: 272 ACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFT 331
Query: 311 WNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGY 369
W A+++G A + ++ + ++L+ P+E T+ VL
Sbjct: 332 WTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVL-------------------- 371
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI-----IAGIYNRTGQYNET 424
++ +G++ + F ++ + P NI + + + G E
Sbjct: 372 -----------SACTHTGMVDEGKKFFASMTARHGIEP-NIAHYGCMVDLLGKAGHLKEA 419
Query: 425 VKLLSQLE-RPDIVSWNIVIAACAHNGD 451
+++ + +P+ + W ++ AC + D
Sbjct: 420 HEIIKNMPMKPNSIVWGALLGACRIHKD 447
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 161/367 (43%), Gaps = 53/367 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
+P+ +V S+N + YSR + + ++L M+ R +P +T+ L S+ G
Sbjct: 74 IPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLG 133
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+L V+K GL ++ F AL+ +Y G +D +F+ + +VTWN+++S + +
Sbjct: 134 RELHCHVVKYGLD-SNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNR 192
Query: 119 ------------HGFV------------------------------------EDCMFLFC 130
GFV ++ + LF
Sbjct: 193 IKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFR 252
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
E+ S++ E + V V+ + LE GE I + KN + V N+L++MYF+C
Sbjct: 253 EMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCG 312
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
+ A +F + RD +W ++ LA + +AL ++ +M V P++ T+V V++
Sbjct: 313 NVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLS 372
Query: 251 SCAGLQNSILGKSIHAKVI-KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-NI 308
+C GK A + ++ +E ++ +VD K +L+ AH + K N
Sbjct: 373 ACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNS 432
Query: 309 VSWNALI 315
+ W AL+
Sbjct: 433 IVWGALL 439
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 157/561 (27%), Positives = 277/561 (49%), Gaps = 42/561 (7%)
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
M ++SL WN+++ + E+ ++ F + R E + + +++ +G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 161 EQIHGLVIKN-GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
E IHG V K+ +L V +SL+ MY +C + A +MF ++E D+V+W++++ +
Sbjct: 61 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120
Query: 220 SENFGKALELYLRMSV-DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ + +A+E + RM + V P++ T + ++++C L NS LG+ +H VI+ D+
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 180
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLG 337
+ ++L++ YAK + A F I+ K+++SW+ +I Y + L+ +++ G
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 240
Query: 338 YRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
PN T VL++ A L+ H L IR G E
Sbjct: 241 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLE----------------------- 277
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
T + + A+V +Y + E + S++ R D+VSW +I+ NG
Sbjct: 278 ---TEVKVSTALV------DMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAH 328
Query: 454 EVLELFKYMR-AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
+E F M PD V +L +CS+L L H + K S+ F+
Sbjct: 329 RSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGF-DSNPFIGAS 387
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM-EFLGFKP 571
L+++Y +CGS+G++ K+FN + ++ + WT+LI+ G++G +ALE F M + KP
Sbjct: 388 LVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKP 447
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ V +++L+AC H GL+ EG+ +F+ M Y + P ++HY +VDLL R G L A +I
Sbjct: 448 NEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEI 507
Query: 632 ITTMPFPPNALIWRTFLEGCQ 652
MPF P I T L C+
Sbjct: 508 TKRMPFSPTPQILGTLLGACR 528
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/543 (26%), Positives = 261/543 (48%), Gaps = 42/543 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
M R++ +N+++ + SR E+ L F +M +P FT L +C L V G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V K+ +D +VG++L+ +Y + G + E + +F+++ + +VTW+S+VS F K
Sbjct: 61 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120
Query: 119 HGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G + F +V S+V + + ++ + + G +HG VI+ GF +L
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 180
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ NSL+N Y + A +FK + +DV+SW+T+I ++ +AL ++ M D
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 240
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN T + V+ +CA + G+ H I+ LE +V V +ALVD Y KC + E A+
Sbjct: 241 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300
Query: 298 LCFSEISNKNIVSWNALILGYA-SKSSPTSI-FLLIELLQLGYRPNEFTFSHVLRSSLAF 355
FS I K++VSW ALI G+ + + SI I LL+ RP+ VL S
Sbjct: 301 AVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSEL 360
Query: 356 QLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L+ H +I+ G+++ ++ SL+ Y++ G + +A
Sbjct: 361 GFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA------------------- 401
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPD 470
K+ + + D V W +I +G + LE F +M +++ + P+
Sbjct: 402 -------------SKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPN 448
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF+S+LSACS + G + L+ ++ + +L+D+ G+ G + ++++I
Sbjct: 449 EVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEIT 508
Query: 531 NEM 533
M
Sbjct: 509 KRM 511
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 156/502 (31%), Positives = 254/502 (50%), Gaps = 19/502 (3%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCA-----GIWSAEKMFKDVEIRDVVSWNTIIGA 216
Q+H ++ +G D V + ++ Y CA G+W A ++F + D +N++I A
Sbjct: 30 QLHAHLVVHGVDD---VTSQILASY--CALPAGGGVWYARQLFDRIPDPDRFVYNSLIRA 84
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
S +AL L M + PN+ T +++ +CA +Q H V+K
Sbjct: 85 YCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQ 144
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQ 335
VFVG+AL+ YA +L + F E+ ++N+VSWN++I GYA + L E + +
Sbjct: 145 VFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRR 204
Query: 336 LGYRPNEFTFSHVL-----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
G +EFT +L +L F L L++R G + +L+ Y K G +
Sbjct: 205 QGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVR-GCRIDLILANALVDMYGKCGDLL 263
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
A + AV +++ + R + Q+ I+SWN +I+ G
Sbjct: 264 MAHTCFDMMPFKNAVSWTSMLCALAKRA-SIDAARDWFEQIPEKSIISWNAMISCYVQGG 322
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
+ E L+L+ M+ + PD +T ++LSAC +L +LA G +H I+ + +
Sbjct: 323 RFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDN-FHNPGVALF 381
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
N L+DMY +CG + +++ +F+EM +NVI+W A+I AL ++G AQ AL FR M F
Sbjct: 382 NSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFP 441
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
PD + +A+L+AC HGGL+ G F+ M Y V+P ++HY C+VDLL R G L +A
Sbjct: 442 PDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVD 501
Query: 631 IITTMPFPPNALIWRTFLEGCQ 652
+I MP P+ ++W L C+
Sbjct: 502 LIKDMPMRPDVVVWGALLGACR 523
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 227/499 (45%), Gaps = 68/499 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+PD + +NS+I AY ++AL + MI RG P +FT LL +C + E
Sbjct: 70 IPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHV 129
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ V+ F FVG ALL Y G L + F++M +++V+WNS+++ + +
Sbjct: 130 MVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQA 189
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + LF + R + E + V ++ S E +LEFG+ +H ++ G +L++A
Sbjct: 190 GNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILA 249
Query: 180 NSLVNMYFQC-------------------------------AGIWSAEKMFKDVEIRDVV 208
N+LV+MY +C A I +A F+ + + ++
Sbjct: 250 NALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSII 309
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SWN +I + F +AL+LY RM + + P++ T V+++C L + GK IH +
Sbjct: 310 SWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCI 369
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSI 327
N V + ++L+D YA+C ++ A FSE+ +KN++SWNA+I A + ++
Sbjct: 370 RDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDAL 429
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
++ + P+E TF +L + LL E +Y ++ Y
Sbjct: 430 MFFRSMVSDAFPPDEITFVALLSACNHGGLL-----------EAGQYYFQAMRHVY---- 474
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
N+ V + + R GQ + V L+ + RPD+V W ++ AC
Sbjct: 475 ------------NVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGAC 522
Query: 447 AHNGD-------YKEVLEL 458
+G K++LEL
Sbjct: 523 RIHGHIQIGKQVIKQLLEL 541
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/528 (23%), Positives = 245/528 (46%), Gaps = 25/528 (4%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
+F+ +P +NS++ + ++ + L ++R + E + ++ + Q
Sbjct: 65 QLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQ 124
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
E HG+V+K GF ++ V N+L++ Y + + + F ++ R+VVSWN++I
Sbjct: 125 AWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIN 184
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
A++ N +A L+ M + ++ T V ++ +C+ N GK +H+ ++
Sbjct: 185 GYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRI 244
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
D+ + +ALVD Y KC +L AH CF + KN VSW +++ A ++S + E +
Sbjct: 245 DLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQI- 303
Query: 336 LGYRPNEFTFSH------VLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG-- 387
P + S ++ + L L+ + +G E+ L +++++ + G
Sbjct: 304 ----PEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDL 359
Query: 388 ----LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
+I D + + P V N + +Y R GQ + + L S++ +++SWN +I
Sbjct: 360 ASGKMIHDCIR--DNFHNP-GVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAII 416
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
A A +G ++ L F+ M + PD TFV+LLSAC+ L G ++ +
Sbjct: 417 GALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNV 476
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFR 562
++D+ G+ G + +V + +M R +V+ W AL+ A ++G Q + +
Sbjct: 477 KPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIK 536
Query: 563 E-MEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
+ +E G LI+ + H E M+ ++ R +G++ M
Sbjct: 537 QLLELEGMSGGLFVLISNMLYETH---QWEDMKRLRKLMREWGMKKNM 581
>gi|302820510|ref|XP_002991922.1| hypothetical protein SELMODRAFT_134446 [Selaginella moellendorffii]
gi|300140308|gb|EFJ07033.1| hypothetical protein SELMODRAFT_134446 [Selaginella moellendorffii]
Length = 690
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 169/608 (27%), Positives = 302/608 (49%), Gaps = 23/608 (3%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G + A +L +G F+G L+ +YG+ G + + F+ + RK++ +W ++ F
Sbjct: 54 QGRYIHAHILASGK-SGKTFLGNLLVRMYGKCGSIADAKEAFDQIHRKNVFSWTIMLGAF 112
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G + ++ +V V +F + S Q + G+ IH V++ G + ++
Sbjct: 113 ADCGHHRQAIQIYHAMVLEGVRPDCVAFASIAGICSELQCFQAGKAIHDCVLEQGAESDV 172
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+VAN+LV MY +C I A +F+ ++ ++ +SWN +I A A+ +F ALELY+ V
Sbjct: 173 IVANNLVTMYSKCGRIDGARCVFRRIKNKNPISWNAMIAAFAQCGDFASALELYVEHPV- 231
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
P++ T + +CA L + G+ IHA+ ++ LE D+ V ++L+ Y KC + A
Sbjct: 232 ---PDKITLILAAKACASLGDLDRGREIHARAVELGLESDLLVANSLIGMYGKCYCVGDA 288
Query: 297 HLCFS--EISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
F E N++++SWN++I Y + S ++ L E ++ PN TF ++ +
Sbjct: 289 KRLFDGLEAKNRDVISWNSIIAAYILAGMSSQALELFRE--RMDVEPNRITFIALIDACS 346
Query: 354 AFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
L+ +H I + V L+ YAK G I +A+A ++ R + +
Sbjct: 347 TLCDLEQGRWIHERIRSSEFAREVAVENGLLLMYAKCGSIEEAMAIFESMEGRRTLATSL 406
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK-EVLELFKYMRAARIY 468
+I +Y + G + + + S + D+V+W +I A + E ++ F M
Sbjct: 407 VI--MYCKFGCVADAMAVFSGMRSRDVVAWTAMITAFSQQEHTSMEAVDYFCQMDLDGSK 464
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD TF S+L + ++L L+ G S+H + SD V L+DMY KCGS+ + +
Sbjct: 465 PDEVTFASVLGSIARLGLLSRGRSVHCDVLACG-FQSDVVVGTALLDMYSKCGSLIDAKR 523
Query: 529 IFNEM-TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
F+++ RN+++W A+I+A+ +G E +R M G +P+ V +L C HGG
Sbjct: 524 AFDDLGGSRNLVSWNAMIAAMAKHGDWSSGFELYRAMILEGVRPNDVTFTNMLFLCSHGG 583
Query: 588 LVREGMELFERMNR---SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT-MPFPPNALI 643
+++ +GV+ DH+ +VD+L R G L+EAE+ + M F P +
Sbjct: 584 GGDRECGIWDACASIVLEFGVKITPDHHCSIVDVLGRSGRLEEAEEFVDKGMGFEPGIVE 643
Query: 644 WRTFLEGC 651
+RT L C
Sbjct: 644 YRTLLGSC 651
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 140/529 (26%), Positives = 237/529 (44%), Gaps = 72/529 (13%)
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+ L G IH ++ +G + + N LV MY +C I A++ F + ++V SW ++
Sbjct: 50 KSLSQGRYIHAHILASGKSGKTFLGNLLVRMYGKCGSIADAKEAFDQIHRKNVFSWTIML 109
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
GA A+ + +A+++Y M ++ V P+ F + C+ LQ GK+IH V++ E
Sbjct: 110 GAFADCGHHRQAIQIYHAMVLEGVRPDCVAFASIAGICSELQCFQAGKAIHDCVLEQGAE 169
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
DV V + LV Y+KC ++GA F I NKN +SWNA+I +A S +EL
Sbjct: 170 SDVIVANNLVTMYSKCGRIDGARCVFRRIKNKNPISWNAMIAAFAQCGDFASA---LELY 226
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
P++ T ++ + L ++H + +G E+ V SL+ Y K +
Sbjct: 227 VEHPVPDKITLILAAKACASLGDLDRGREIHARAVELGLESDLLVANSLIGMYGKCYCVG 286
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
DA L NR D++SWN +IAA G
Sbjct: 287 DAKRLFDGLEAK-------------NR-----------------DVISWNSIIAAYILAG 316
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
+ LELF+ + P+ TF++L+ ACS LC+L G +H I+ +E + + V
Sbjct: 317 MSSQALELFR--ERMDVEPNRITFIALIDACSTLCDLEQGRWIHERIRSSE-FAREVAVE 373
Query: 511 NMLIDMYGKCGSI------------------------------GSSVKIFNEMTDRNVIT 540
N L+ MY KCGSI ++ +F+ M R+V+
Sbjct: 374 NGLLLMYAKCGSIEEAMAIFESMEGRRTLATSLVIMYCKFGCVADAMAVFSGMRSRDVVA 433
Query: 541 WTALISALGLNGF-AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
WTA+I+A + A++ F +M+ G KPD V +VL + GL+ G + +
Sbjct: 434 WTAMITAFSQQEHTSMEAVDYFCQMDLDGSKPDEVTFASVLGSIARLGLLSRGRSVHCDV 493
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ G + ++ ++D+ + G L +A++ + N + W +
Sbjct: 494 -LACGFQSDVVVGTALLDMYSKCGSLIDAKRAFDDLGGSRNLVSWNAMI 541
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/522 (26%), Positives = 249/522 (47%), Gaps = 84/522 (16%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
+NV S+ ++ A++ CG+ A++++ M+ G P F + C L + G +
Sbjct: 100 KNVFSWTIMLGAFADCGHHRQAIQIYHAMVLEGVRPDCVAFASIAGICSELQCFQAGKAI 159
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
VL+ G +D V L+ +Y + G +D VF + K+ ++WN++++ F + G
Sbjct: 160 HDCVLEQGAE-SDVIVANNLVTMYSKCGRIDGARCVFRRIKNKNPISWNAMIAAFAQCGD 218
Query: 122 VEDCMFLFCE-LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ L+ E V ++ L ++ ++ DL+ G +IH ++ G + +LLVAN
Sbjct: 219 FASALELYVEHPVPDKITLILAA-----KACASLGDLDRGREIHARAVELGLESDLLVAN 273
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEI--RDVVSWNTIIGALAESENFGKALELYL-RMSVDI 237
SL+ MY +C + A+++F +E RDV+SWN+II A + +ALEL+ RM V+
Sbjct: 274 SLIGMYGKCYCVGDAKRLFDGLEAKNRDVISWNSIIAAYILAGMSSQALELFRERMDVE- 332
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE--- 294
PN+ TF+ +I++C+ L + G+ IH ++ + +V V + L+ YAKC ++E
Sbjct: 333 --PNRITFIALIDACSTLCDLEQGRWIHERIRSSEFAREVAVENGLLLMYAKCGSIEEAM 390
Query: 295 ---------------------------GAHLCFSEISNKNIVSWNALILGYASKSSPTSI 327
A FS + ++++V+W A+I + S+ TS+
Sbjct: 391 AIFESMEGRRTLATSLVIMYCKFGCVADAMAVFSGMRSRDVVAWTAMITAF-SQQEHTSM 449
Query: 328 FLLIELLQL---GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLM 380
+ Q+ G +P+E TF+ VL S LL +HC ++ G+++ V +L+
Sbjct: 450 EAVDYFCQMDLDGSKPDEVTFASVLGSIARLGLLSRGRSVHCDVLACGFQSDVVVGTALL 509
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
Y+K G + DA L R ++VSWN
Sbjct: 510 DMYSKCGSLIDAKRAFDDLGGSR-------------------------------NLVSWN 538
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
+IAA A +GD+ EL++ M + P++ TF ++L CS
Sbjct: 539 AMIAAMAKHGDWSSGFELYRAMILEGVRPNDVTFTNMLFLCS 580
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 198/386 (51%), Gaps = 44/386 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
+ ++N +S+N++I+A+++CG AL +++ P + T +C SL ++ G
Sbjct: 198 IKNKNPISWNAMIAAFAQCGDFASALELYVEHP----VPDKITLILAAKACASLGDLDRG 253
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS--LVTWNSIVSIF 116
++ A ++ GL +D V +L+G+YG+ C+ + +F+ + K+ +++WNSI++ +
Sbjct: 254 REIHARAVELGLE-SDLLVANSLIGMYGKCYCVGDAKRLFDGLEAKNRDVISWNSIIAAY 312
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G + LF E R +V +F+ +I S DLE G IH + + F E+
Sbjct: 313 ILAGMSSQALELFRE--RMDVEPNRITFIALIDACSTLCDLEQGRWIHERIRSSEFAREV 370
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVE------------------------------IRD 206
V N L+ MY +C I A +F+ +E RD
Sbjct: 371 AVENGLLLMYAKCGSIEEAMAIFESMEGRRTLATSLVIMYCKFGCVADAMAVFSGMRSRD 430
Query: 207 VVSWNTIIGALAESENFG-KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
VV+W +I A ++ E+ +A++ + +M +D P++ TF V+ S A L G+S+H
Sbjct: 431 VVAWTAMITAFSQQEHTSMEAVDYFCQMDLDGSKPDEVTFASVLGSIARLGLLSRGRSVH 490
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI-SNKNIVSWNALILGYASKSSP 324
V+ + DV VG+AL+D Y+KC +L A F ++ ++N+VSWNA+I A
Sbjct: 491 CDVLACGFQSDVVVGTALLDMYSKCGSLIDAKRAFDDLGGSRNLVSWNAMIAAMAKHGDW 550
Query: 325 TSIFLLIELLQL-GYRPNEFTFSHVL 349
+S F L + L G RPN+ TF+++L
Sbjct: 551 SSGFELYRAMILEGVRPNDVTFTNML 576
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 160/549 (29%), Positives = 264/549 (48%), Gaps = 55/549 (10%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV---EIRDVVSWNTI 213
L+ Q+H ++ +A L+ +Y + A + A K+F + + ++ WN+I
Sbjct: 44 LQQARQLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSI 103
Query: 214 IGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
I A ALELY+ M P+ T VI +C+ L +S L + +H ++
Sbjct: 104 IRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGF 163
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL 333
+ V + LV Y K +E A F + ++IVSWN ++ GYA + +
Sbjct: 164 RNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKR 223
Query: 334 LQL-GYRPNEFTFSHVLRS---------------------------SLAFQL-------- 357
++L G +PN T++ +L S +LA L
Sbjct: 224 MELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAE 283
Query: 358 ----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
++H +++ GYE+Y +V +L+ +Y K + DA + + +V N +
Sbjct: 284 VDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIK-NKNLVSWNALIS 342
Query: 414 IYNRTGQYNETVKLLSQLE----------RPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
Y +G +E +E RP+++SW+ VI+ A+ G ++ LELF+ M+
Sbjct: 343 SYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQ 402
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
A++ + T S+LS C++L L LG LHG + ++S + V N LI+MY KCG
Sbjct: 403 LAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRN-MMSDNILVGNGLINMYMKCGDF 461
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+F+ + R++I+W +LI G++G + AL F EM KPD + +A+L+AC
Sbjct: 462 KEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVAILSAC 521
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
H GLV G LF++M + +EP ++HY C+VDLL R G LKEA I+ MP PN +
Sbjct: 522 SHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVRNMPIEPNEYV 581
Query: 644 WRTFLEGCQ 652
W L C+
Sbjct: 582 WGALLNSCR 590
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 139/537 (25%), Positives = 232/537 (43%), Gaps = 77/537 (14%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSL---VTWNSIVSIFGKHGFVEDCMFLFCEL 132
F+ L+ +Y R L VF+ +P +SL + WNSI+ HG+ + + L+ E+
Sbjct: 64 FLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQHALELYVEM 123
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
+ + VI S+ +H ++ GF L V N LV MY + +
Sbjct: 124 RKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRM 183
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS- 251
A ++F + +R +VSWNT++ A + + A ++ RM ++ + PN T+ +++S
Sbjct: 184 EDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSH 243
Query: 252 ----------------------------------CAGLQNSILGKSIHAKVIKNALECDV 277
CA + GK IH V+K E +
Sbjct: 244 ARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYL 303
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK---SSPTSIFLLIELL 334
FV +AL+ Y K ++ AH F EI NKN+VSWNALI YA + FL +E
Sbjct: 304 FVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKS 363
Query: 335 QLG----YRPNEFTFSHVL----------RSSLAFQLLQL-----HCL----IIRMGYEN 371
RPN ++S V+ +S F+ +QL +C+ ++ + E
Sbjct: 364 DSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAEL 423
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
LG + YA ++SD ++ N + +Y + G + E + +
Sbjct: 424 AALNLGRELHGYAIRNMMSD------------NILVGNGLINMYMKCGDFKEGHLVFDNI 471
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
E D++SWN +I +G + L F M AR+ PDN TFV++LSACS +A G
Sbjct: 472 EGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVAILSACSHAGLVAAGR 531
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISA 547
+L + I + ++D+ G+ G + + I M + N W AL+++
Sbjct: 532 NLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVRNMPIEPNEYVWGALLNS 588
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 191/420 (45%), Gaps = 80/420 (19%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQL-QASVL 66
+NSII A GY + AL +++ M GF P FT ++ +C SL ++ L
Sbjct: 100 WNSIIRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHAL 159
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS------------ 114
+ G F V L+G+YG+ G +++ +F+ M +S+V+WN++VS
Sbjct: 160 QMG-FRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGAS 218
Query: 115 --------------------IFGKH---GFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
+ H G ++ + LF + + + + V+
Sbjct: 219 RVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVC 278
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
++ ++++G++IHG V+K G++ L V N+L+ Y + + A K+F +++ +++VSWN
Sbjct: 279 ADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWN 338
Query: 212 TIIGALAES----ENFG-------------------------------------KALELY 230
+I + AES E + K+LEL+
Sbjct: 339 ALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELF 398
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
+M + V N T V++ CA L LG+ +H I+N + ++ VG+ L++ Y KC
Sbjct: 399 RQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINMYMKC 458
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL 349
+ + HL F I ++++SWN+LI GY ++ E+++ +P+ TF +L
Sbjct: 459 GDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVAIL 518
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 156/336 (46%), Gaps = 45/336 (13%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQ 62
N V++ S++S+++RCG ++ L +F M RG E +LS C + V+ G ++
Sbjct: 232 NSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIH 291
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
V+K G + FV AL+G YG+H + + VF ++ K+LV+WN+++S + + G
Sbjct: 292 GYVVKGG-YEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLC 350
Query: 123 EDCMFLFCELVRSE------VALTESSFVGVIHGLS----NEQDLEF------------- 159
++ F + +S+ V S+ VI G + E+ LE
Sbjct: 351 DEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMANC 410
Query: 160 ------------------GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKD 201
G ++HG I+N +LV N L+NMY +C +F +
Sbjct: 411 VTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLVFDN 470
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILG 261
+E RD++SWN++IG AL + M + P+ TFV ++++C+ G
Sbjct: 471 IEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVAILSACSHAGLVAAG 530
Query: 262 KSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEGA 296
+++ +++ +E +V + +VD + L+ A
Sbjct: 531 RNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEA 566
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGAQL 61
R+++S+NS+I Y G E+ALR F MI +P TF +LS C V G L
Sbjct: 474 RDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVAILSACSHAGLVAAGRNL 533
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP 102
++ + ++ L GR G L E + +MP
Sbjct: 534 FDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVRNMP 574
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 160/526 (30%), Positives = 270/526 (51%), Gaps = 29/526 (5%)
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA-----GIWSAEKMFKDV 202
I L N + ++ +QI + + G + + N L M F CA + AEK+F V
Sbjct: 147 IECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKL--MAF-CADSSLGNLRYAEKIFNYV 203
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
+ + +N ++ A+ K L L+ ++ D ++P+ T+ +V+ + L++ G+
Sbjct: 204 QDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGE 263
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-K 321
+ ++K ++ D +V ++L+D Y + N+E A F E++ ++ VSWN +I GY +
Sbjct: 264 KVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCR 323
Query: 322 SSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV---LG 377
+I E+ Q G +P+E T L + A + L+L G E + YV LG
Sbjct: 324 RFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLEL-------GDEIHNYVRKELG 376
Query: 378 -------SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+L+ YAK G ++ A +++ + ++I+G N G E L +
Sbjct: 377 FTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYIN-CGDLREARDLFDK 435
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
D+V W +I + + + LF+ M+ R+ PD +T V+LL+ C++L L G
Sbjct: 436 SPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQG 495
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+HG + + I + D V LI+MY KCG + S++IF E+ D++ +WT++I L +
Sbjct: 496 KWIHGYLDENRI-TMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAM 554
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
NG AL F EME +G KPD + I VL+AC HGGLV EG F M + + +EP+++
Sbjct: 555 NGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVE 614
Query: 611 HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRI 656
HY CV+DLL R G L EAE++I +P ++ + CRI
Sbjct: 615 HYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRI 660
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/553 (25%), Positives = 251/553 (45%), Gaps = 58/553 (10%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGL------------FCADAFVGTALLGLYGRHGCLDEV 94
L +C S++ ++ Q+Q+ + + GL FCAD+ +G L
Sbjct: 150 LRNCKSMDQLK--QIQSQIFRIGLEGDRDTINKLMAFCADSSLGN-----------LRYA 196
Query: 95 VSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE 154
+F + SL +N +V ++ K G + + LF +L + ++ V+ +
Sbjct: 197 EKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCL 256
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+D+ GE++ G ++K G D + V NSL++MY++ + + +A+K+F ++ RD VSWN +I
Sbjct: 257 RDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMI 316
Query: 215 GALAESENFGKALELYLRMSVD-IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
F A+ + M + P++ T V +++C L+N LG IH ++ L
Sbjct: 317 SGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIH-NYVRKEL 375
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-----------KS 322
+ +AL+D YAKC L A F E+S KN++ W ++I GY +
Sbjct: 376 GFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDK 435
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTS 382
SP +L + GY F H + F+ +Q+ R+ + + V +L+T
Sbjct: 436 SPVRDVVLWTAMINGY----VQFHHFDDAVALFREMQIQ----RVKPDKFTVV--TLLTG 485
Query: 383 YAKSGLISDAL---AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
A+ G + ++ I VV + +Y++ G ++++++ +LE D SW
Sbjct: 486 CAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASW 545
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+I A NG E L LF M PD+ TF+ +LSACS + G +KK
Sbjct: 546 TSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKK 605
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN----VITWTALISALGLNG--- 552
I +ID+ G+ G + + ++ E+ N V + AL+SA ++
Sbjct: 606 VHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVD 665
Query: 553 FAQRALEKFREME 565
+R +K +E
Sbjct: 666 MGERLAKKLENIE 678
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 141/287 (49%), Gaps = 36/287 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLLS-CDSLNPVE- 57
M R+ VS+N +IS Y RC EDA+ F M G E P + T LS C +L +E
Sbjct: 304 MTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLEL 363
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS--- 114
G ++ V K F + ALL +Y + GCL+ ++F++M K+++ W S++S
Sbjct: 364 GDEIHNYVRKELGFTTR--IDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYI 421
Query: 115 ----------IFGK-------------HGFVE-----DCMFLFCELVRSEVALTESSFVG 146
+F K +G+V+ D + LF E+ V + + V
Sbjct: 422 NCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVT 481
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
++ G + LE G+ IHG + +N +++V +L+ MY +C + + ++F ++E +D
Sbjct: 482 LLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKD 541
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
SW +II LA + +AL L+ M P+ TF+ V+++C+
Sbjct: 542 TASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACS 588
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 135/299 (45%), Gaps = 38/299 (12%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQ 60
P R+VV + ++I+ Y + + +DA+ +F M + +P +FT LL+ C L +E +
Sbjct: 437 PVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGK 496
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L D VGTAL+ +Y + GC+D+ + +F ++ K +W SI+ +G
Sbjct: 497 WIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNG 556
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + LF E+ R + +F+GV+ S HG +++ G +
Sbjct: 557 KTSEALRLFSEMERVGAKPDDITFIGVLSACS-----------HGGLVEEGRRF------ 599
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD---I 237
+++ K +E + V + +I L + +A EL + ++ I
Sbjct: 600 ------------FNSMKKVHRIEPK-VEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEI 646
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P + ++++C N +G+ + AK ++N CD + + L + YA D E A
Sbjct: 647 VVP---LYGALLSACRIHNNVDMGERL-AKKLENIESCDSSIHTLLANIYASVDRWEDA 701
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 149/461 (32%), Positives = 243/461 (52%), Gaps = 10/461 (2%)
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQN 257
MF + D V +NTI A S+ +AL L+ M V PN+ T +V+ +C Q
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
++H +K VFV +AL+ YA +L + F E++ +N+VSWN++I G
Sbjct: 61 WDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGG 120
Query: 318 YA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL-----RSSLAFQLLQLHCLIIRMGYEN 371
YA + + + L E+ + G+ +EFT + +L +L F L +HCL++ G
Sbjct: 121 YAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRL-VHCLMLVSGSPV 179
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
+ G+L+ Y+K G + A + I ++VV + + G + +
Sbjct: 180 DLILGGALVDMYSKCGDLCMARRCFEMMPI-KSVVSWTSMLCAQTKHGSVDAARCWFDHM 238
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
+ VSWN +I+ G Y E L+L+K M++ PD T V +LSAC ++ +L +G
Sbjct: 239 PERNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGK 298
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H L + I + D + N L+DMY KCG + +++++F EM +RNV++W +I L ++
Sbjct: 299 MVH-LYIRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMH 357
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G A A+ FR M PD + +A+L++C HGGL+ G FE M Y V+ E++H
Sbjct: 358 GRALDAITFFRSM-VRNTSPDGITFVALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEH 416
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y C+VDLL R GHL++A +I MP P+ ++W L C+
Sbjct: 417 YACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACR 457
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 218/495 (44%), Gaps = 64/495 (12%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA- 59
PDR V +N+I AY +ALR+ M+ RG P +FT ++ +C + A
Sbjct: 8 PDR--VMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQAWDNAL 65
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ LK G F FV ALL Y G L + F++M +++V+WNS++ + +
Sbjct: 66 AVHGVALKLG-FVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQA 124
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + LF E+ R E + ++ S E +LEFG +H L++ +G +L++
Sbjct: 125 GDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILG 184
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEI-------------------------------RDVV 208
+LV+MY +C + A + F+ + I R+ V
Sbjct: 185 GALVDMYSKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTV 244
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SWNT+I + + +AL+LY +M P++ T V V+++C + + +GK +H +
Sbjct: 245 SWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYI 304
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
N D+ + ++L+D YAKC ++ A F E+ N+N+VSWN +I G A
Sbjct: 305 RDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALDAI 364
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
+ P+ TF +L S LL E ++ S+ Y
Sbjct: 365 TFFRSMVRNTSPDGITFVALLSSCSHGGLL-----------ETGQHYFESMRHVY----- 408
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACA 447
N+ V + + R G + V L+ ++ +PD+V W ++ AC
Sbjct: 409 -----------NVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACR 457
Query: 448 HNGDYKEVLELFKYM 462
+G+ K ++ K +
Sbjct: 458 IHGNVKIGKQVIKQL 472
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/482 (23%), Positives = 219/482 (45%), Gaps = 19/482 (3%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F+ + V +N+I + + + L ++R V E + V+ + Q
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
+ +HG+ +K GF ++ VAN+L++ Y + + + F ++ R+VVSWN++IG
Sbjct: 61 WDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGG 120
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
A++ + +A L+ M ++ T ++ +C+ N G+ +H ++ + D
Sbjct: 121 YAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVD 180
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
+ +G ALVD Y+KC +L A CF + K++VSW +++ S + +
Sbjct: 181 LILGGALVDMYSKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFD---- 236
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQLH---CLIIRMGYENYEYVLGSLMTSYAKSGLISD-A 392
+ P T S S Q Q H L +M +L+ + G I D
Sbjct: 237 -HMPERNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLT 295
Query: 393 LAFVTALNIPRAVVPANI-----IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
+ + L I + +I + +Y + GQ + ++L ++ ++VSWN++I A
Sbjct: 296 VGKMVHLYIRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLA 355
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
+G + + F+ M PD TFV+LLS+CS L G ++ + +
Sbjct: 356 MHGRALDAITFFRSM-VRNTSPDGITFVALLSSCSHGGLLETGQHYFESMRHVYNVKHEV 414
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNG---FAQRALEKFRE 563
++D+ G+ G + +V + EM + +V+ W AL+ A ++G ++ +++ E
Sbjct: 415 EHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGKQVIKQLLE 474
Query: 564 ME 565
+E
Sbjct: 475 LE 476
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 169/354 (47%), Gaps = 45/354 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGG-LLSCDSLNPVEGA 59
M RNVVS+NS+I Y++ G +A +F M +GF +FT LL+C +E
Sbjct: 106 MAGRNVVSWNSMIGGYAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFG 165
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYG-------------------------------RH 88
+L ++ D +G AL+ +Y +H
Sbjct: 166 RLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKH 225
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI 148
G +D F+ MP ++ V+WN+++S + + G + + L+ ++ A E++ V V+
Sbjct: 226 GSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVL 285
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
DL G+ +H + N + ++ + NSL++MY +C + +A ++F+++ R+VV
Sbjct: 286 SACGRIGDLTVGKMVHLYIRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVV 345
Query: 209 SWNTIIGALAESENFGKALE--LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH- 265
SWN IIG LA G+AL+ + R V P+ TFV +++SC+ +L H
Sbjct: 346 SWNVIIGGLAM---HGRALDAITFFRSMVRNTSPDGITFVALLSSCS--HGGLLETGQHY 400
Query: 266 ---AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-NIVSWNALI 315
+ + N ++ +V + +VD + +LE A E+ K ++V W AL+
Sbjct: 401 FESMRHVYN-VKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALL 453
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 110/219 (50%), Gaps = 4/219 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP+RN VS+N++IS Y + G +AL ++ M + G P + T +LS C + +
Sbjct: 238 MPERNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVG 297
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ +++ + D + +LL +Y + G +D + +F +M +++V+WN I+ H
Sbjct: 298 KMVHLYIRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMH 357
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ-IHGLVIKNGFDYELLV 178
G D + F +VR+ + +FV ++ S+ LE G+ + +E+
Sbjct: 358 GRALDAITFFRSMVRN-TSPDGITFVALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEH 416
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
+V++ + + A + K++ ++ DVV W ++GA
Sbjct: 417 YACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGA 455
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 161/508 (31%), Positives = 258/508 (50%), Gaps = 50/508 (9%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII----G 215
G+Q+H +IK GF L + N ++++Y +C A+K+F+++ +R+VVSWN +I G
Sbjct: 79 GKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVG 138
Query: 216 ALAESENFGKAL--ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
E+E+ G L + RM ++++ P+ TF +I C + +G +H +K
Sbjct: 139 RNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGF 198
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL 333
+ D FVG ALV YAKC +E A F ++S +++V WN ++ Y S P F +
Sbjct: 199 DLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNS 258
Query: 334 LQLG-YRPNEFTFSHVLR--SSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKS 386
++L +EFTFS +L S A + Q+H L++R +++ V +L+ YAKS
Sbjct: 259 MRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKS 318
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
I DA ++I V +I G N G NE +KL+ ++ R +
Sbjct: 319 ENIIDARRVFDEMSIRNVVAWNTMIVGFGNH-GDGNEVMKLVKEMLREGFL--------- 368
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
PD T S++S+C + +H K +S
Sbjct: 369 ----------------------PDELTISSIISSCGYASAITETLQVHAFAVK---LSCQ 403
Query: 507 TF--VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
F V N LI Y KCGSI S+ K F + +++TWT+LI A +G A+++ E F +M
Sbjct: 404 DFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKM 463
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
G KPDR+A + VL+AC H GLV +G+ F+ M +Y + P+ +HY C+VDLL RYG
Sbjct: 464 LSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGL 523
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ EA +I+ +MP ++ F+ C+
Sbjct: 524 INEAFEILRSMPIEVDSDTLGAFIGSCK 551
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 142/539 (26%), Positives = 266/539 (49%), Gaps = 49/539 (9%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV-SI 115
EG QL A ++K G FC + +L +Y + ++ +FE++P +++V+WN ++ +
Sbjct: 78 EGKQLHAHLIKFG-FCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRAS 136
Query: 116 FGKHGFVED-----CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
G++ E C F ++ + +F G+I + D+E G Q+H +K
Sbjct: 137 VGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKV 196
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
GFD + V +LV +Y +C + +A ++F DV RD+V WN ++ + +A ++
Sbjct: 197 GFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVF 256
Query: 231 LRMSVDIVFPNQTTFVYVIN--SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
M +D+V ++ TF +++ S L+ GK +H+ V++ + + DV V SAL++ YA
Sbjct: 257 NSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYA 316
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSH 347
K +N+ A F E+S +N+V+WN +I+G+ + + L+ E+L+ G+ P+E T S
Sbjct: 317 KSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISS 376
Query: 348 VLRS----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
++ S S + LQ+H +++ +++ V SL+++Y+K G I+ A
Sbjct: 377 IISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAF---------- 426
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+ +L SQ PD+V+W +I A A +G ++ E+F+ M
Sbjct: 427 -------------------KCFELTSQ---PDLVTWTSLIYAYAFHGLAEKSTEMFEKML 464
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ I PD F+ +LSAC+ + G L+ I D+ L+D+ G+ G I
Sbjct: 465 SYGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLI 524
Query: 524 GSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ +I M + + T A I + L+ + L K + +P++ AV++
Sbjct: 525 NEAFEILRSMPIEVDSDTLGAFIGSCKLH--SNMELAKLAAEKLFLIEPEKSVNYAVMS 581
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 210/419 (50%), Gaps = 21/419 (5%)
Query: 1 MPDRNVVSFNSIISA-YSRCGYVEDA-LRM----FLYMINRGFEPTQFTFGGLLS-CDSL 53
+P RNVVS+N +I A R E + +R+ F M+ P TF GL+ C
Sbjct: 121 LPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQF 180
Query: 54 NPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
N +E G QL +K G F D FVG AL+GLY + G ++ VF D+ + LV WN +
Sbjct: 181 NDIEMGVQLHCFTVKVG-FDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVM 239
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE--QDLEFGEQIHGLVIKN 170
VS + + E+ +F + V E +F ++ +S++ + +FG+Q+H LV++
Sbjct: 240 VSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQ 299
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
FD ++LVA++L+NMY + I A ++F ++ IR+VV+WNT+I + + ++L
Sbjct: 300 SFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLV 359
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF--VGSALVDFYA 288
M + P++ T +I+SC +HA +K L C F V ++L+ Y+
Sbjct: 360 KEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVK--LSCQDFLSVANSLISAYS 417
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSH 347
KC ++ A CF S ++V+W +LI YA + S + ++L G +P+ F
Sbjct: 418 KCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLG 477
Query: 348 VLRSSLAFQLLQLHCLIIRMGYENYEYVLGS-----LMTSYAKSGLISDALAFVTALNI 401
VL + L+ ++ Y+ V S L+ + GLI++A + ++ I
Sbjct: 478 VLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPI 536
>gi|115446475|ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group]
gi|49388326|dbj|BAD25438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113536548|dbj|BAF08931.1| Os02g0529900 [Oryza sativa Japonica Group]
gi|125582364|gb|EAZ23295.1| hypothetical protein OsJ_06992 [Oryza sativa Japonica Group]
gi|215696993|dbj|BAG90987.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 787
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 189/651 (29%), Positives = 306/651 (47%), Gaps = 71/651 (10%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-GA 59
PD VS+ S++SAY+ G AL +FL MI+ G +T L + SL V G
Sbjct: 169 PDS--VSWTSMLSAYTENGCDTQALMLFLEMIHGGVSCDAYTLSVALRAASSLGHVRLGY 226
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
QL ++K+G F F+ L+ YGR L + VF++M K LV+WN ++ + +
Sbjct: 227 QLHCYMIKSG-FVPSEFLENCLIEFYGRCRELQLMQKVFDEMNAKDLVSWNIVIQCYADN 285
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
E+ + F +L+ E + ++H ++ ++G +IHG +I+ G D + V
Sbjct: 286 LCDEEALVHFRDLMYKCAECDEYTLGSILHVITRRCAFDYGREIHGYLIRAGLDSDKYVM 345
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
++L++MY A + + M + +R + + ++ G L
Sbjct: 346 SALMDMYVNWATLRKSRSM---LPLRMLKYYLSVQGKL---------------------- 380
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
+Q + SCA + G+ +HA V+K + D FV S+LVD YAKC +LE AH+
Sbjct: 381 -DQFIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPFVISSLVDMYAKCGSLEEAHIL 439
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAF--- 355
FS + V+W+A+I G L +QL + +PNEFT++ VL + +A
Sbjct: 440 FSRTKDPCTVAWSAIISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYTSVLTACMALGDV 499
Query: 356 -QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+++H IR GY + VL SL++
Sbjct: 500 VSGMEIHSNSIRNGYGTSDSVLRSLIS--------------------------------F 527
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y R GQ+N+ ++L L +I SW + A GD+ +L LF ++ + D T
Sbjct: 528 YLREGQFNQALRLCLSLSNSEI-SWGTLFQEFAELGDHLGILNLFHVIQRSGGVLDYPTA 586
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+LS+C K +L G H + K + SS +C+ LIDMY CGS+ + + F +
Sbjct: 587 CLILSSCGKKAHLPEGLQAHAYLMKRGL-SSTGCMCDYLIDMYSGCGSLTHAFEAFRNTS 645
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
RN +WT++I A NG + A+ F +M P+ +A ++VL AC GLV E +
Sbjct: 646 GRNSSSWTSIIMASVENGCPETAIRLFVQMLRKEKSPNSLAFLSVLKACAEIGLVNEAFQ 705
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII-TTMPFPPNALIW 644
F M Y ++P +HY ++++L R G KEAE I + +P A W
Sbjct: 706 FFVSMTEVYKIQPSEEHYSHMIEVLGRAGMFKEAEHFIDSVVPSESGASAW 756
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 141/600 (23%), Positives = 255/600 (42%), Gaps = 62/600 (10%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDM-PR-KSLVTWNSIVSIFGKHGFVEDCMFLFCE 131
DA L+ + R G + F+ M PR +SLV W ++S + HG + + L
Sbjct: 35 DAAPQLLLMRAHARAGRMQPARQAFDAMLPRDRSLVAWTVLMSGYATHGPASEALDLLLR 94
Query: 132 LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELLVANSLVNMYFQCA 190
+V + F + + L G Q+H K G+ +L VAN LV MY C
Sbjct: 95 MVEWPLRPDAFVFSVALRACAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYASCR 154
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
+ AEK+F + D VSW +++ A E+ +AL L+L M V + T +
Sbjct: 155 SLGCAEKVFSGIAAPDSVSWTSMLSAYTENGCDTQALMLFLEMIHGGVSCDAYTLSVALR 214
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+ + L + LG +H +IK+ F+ + L++FY +C L+ F E++ K++VS
Sbjct: 215 AASSLGHVRLGYQLHCYMIKSGFVPSEFLENCLIEFYGRCRELQLMQKVFDEMNAKDLVS 274
Query: 311 WNALILGYASKSSPTSIFLLIELLQLGYR---PNEFTFS---HVLRSSLAFQL-LQLHCL 363
WN +I YA L+ L Y+ +E+T HV+ AF ++H
Sbjct: 275 WNIVIQCYADNLCDEEA--LVHFRDLMYKCAECDEYTLGSILHVITRRCAFDYGREIHGY 332
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALA-------------------FVTALNIPRA 404
+IR G ++ +YV+ +LM Y + + + F+ A ++
Sbjct: 333 LIRAGLDSDKYVMSALMDMYVNWATLRKSRSMLPLRMLKYYLSVQGKLDQFIVASSLKSC 392
Query: 405 VVPANIIAG------------------------IYNRTGQYNETVKLLSQLERPDIVSWN 440
++ AG +Y + G E L S+ + P V+W+
Sbjct: 393 ASDLDLAAGRMLHACVLKFDVNPDPFVISSLVDMYAKCGSLEEAHILFSRTKDPCTVAWS 452
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
+I+ NG ++ + LF+ M+ + P+ +T+ S+L+AC L ++ G +H +
Sbjct: 453 AIISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYTSVLTACMALGDVVSGMEIHSNSIRN 512
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
+SD+ V LI Y + G ++++ +++ I+W L G L
Sbjct: 513 GYGTSDS-VLRSLISFYLREGQFNQALRLCLSLSNSE-ISWGTLFQEFAELGDHLGILNL 570
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
F ++ G D +L++C + EG++ +Y ++ + C+ D L+
Sbjct: 571 FHVIQRSGGVLDYPTACLILSSCGKKAHLPEGLQ-----AHAYLMKRGLSSTGCMCDYLI 625
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 124/567 (21%), Positives = 234/567 (41%), Gaps = 75/567 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
M +++VS+N +I Y+ E+AL F ++ + E ++T G +L + G
Sbjct: 267 MNAKDLVSWNIVIQCYADNLCDEEALVHFRDLMYKCAECDEYTLGSILHVITRRCAFDYG 326
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ +++ GL +D +V +AL+ +Y L + S+ +P + L + +S+ GK
Sbjct: 327 REIHGYLIRAGLD-SDKYVMSALMDMYVNWATLRKSRSM---LPLRMLKYY---LSVQGK 379
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
L + + +++ DL G +H V+K + + V
Sbjct: 380 --------------------LDQFIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPFV 419
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+SLV+MY +C + A +F + V+W+ II + F +A+ L+ M ++ V
Sbjct: 420 ISSLVDMYAKCGSLEEAHILFSRTKDPCTVAWSAIISGSCLNGQFERAIHLFRTMQLEHV 479
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA-H 297
PN+ T+ V+ +C L + + G IH+ I+N V +L+ FY + A
Sbjct: 480 QPNEFTYTSVLTACMALGDVVSGMEIHSNSIRNGYGTSDSVLRSLISFYLREGQFNQALR 539
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-----LGYRPNEFTFSHVLRSS 352
LC S +SN I SW L +A I L ++Q L Y S + +
Sbjct: 540 LCLS-LSNSEI-SWGTLFQEFAELGDHLGILNLFHVIQRSGGVLDYPTACLILSSCGKKA 597
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ LQ H +++ G + + L+ Y+ G ++ A
Sbjct: 598 HLPEGLQAHAYLMKRGLSSTGCMCDYLIDMYSGCGSLTHAF------------------E 639
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
N +G+ + SW +I A NG + + LF M P++
Sbjct: 640 AFRNTSGRNSS--------------SWTSIIMASVENGCPETAIRLFVQMLRKEKSPNSL 685
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEI--ISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
F+S+L AC+++ + + + TE+ I + +I++ G+ G +
Sbjct: 686 AFLSVLKACAEIG--LVNEAFQFFVSMTEVYKIQPSEEHYSHMIEVLGRAGMFKEAEHFI 743
Query: 531 NEM--TDRNVITWTALISALGLNGFAQ 555
+ + ++ W+ L SA NG A+
Sbjct: 744 DSVVPSESGASAWSLLCSAAKQNGNAK 770
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 117/249 (46%), Gaps = 4/249 (1%)
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD--IVSWNIVIAAC 446
++ A+ +A +P A P ++ + R G+ + + D +V+W ++++
Sbjct: 21 VAHAVPHRSAETVPDAA-PQLLLMRAHARAGRMQPARQAFDAMLPRDRSLVAWTVLMSGY 79
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
A +G E L+L M + PD + F L AC+ +L +G +H K + +D
Sbjct: 80 ATHGPASEALDLLLRMVEWPLRPDAFVFSVALRACAAAGSLGVGRQVHAAAAKMGYVGAD 139
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
FV N L+ MY C S+G + K+F+ + + ++WT+++SA NG +AL F EM
Sbjct: 140 LFVANGLVTMYASCRSLGCAEKVFSGIAAPDSVSWTSMLSAYTENGCDTQALMLFLEMIH 199
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
G D L L A G VR G +L M +S G P +C+++ R L+
Sbjct: 200 GGVSCDAYTLSVALRAASSLGHVRLGYQLHCYMIKS-GFVPSEFLENCLIEFYGRCRELQ 258
Query: 627 EAEKIITTM 635
+K+ M
Sbjct: 259 LMQKVFDEM 267
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 176/658 (26%), Positives = 297/658 (45%), Gaps = 70/658 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP RN VS+N+++SA +R G + DA R+F + R ++ +++ S + G
Sbjct: 37 MPSRNTVSYNAMLSALARHGRIADARRLFDEIPRR----NTVSWNAMIAACSDH---GRV 89
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKH 119
A L + + D F T ++ Y R G L + MP K +N+++S + KH
Sbjct: 90 ADARDLFDAMPARDGFSWTLMVSCYARAGELGLARDALDRMPGDKCTACYNAMISGYAKH 149
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G +D + L E+ ++ S VG+ + ++F +++ +++
Sbjct: 150 GRFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFFDEMPA--------RDMVSW 201
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N ++ Y + + SA +F V +VVSW T++ + G+A EL+ R+
Sbjct: 202 NLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYCRAGRIGEARELFDRI------ 255
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P++ + + ++ Y + ++E A+
Sbjct: 256 PDRNVAAWNV---------------------------------MLSGYLRLSHMEEAYKL 282
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
F+E+ +KN +SW +I L++ + S +++L LQ
Sbjct: 283 FTEMPDKNSISWTTMISALVRGGKLQEAKDLLDKMPFD--------SFAAKTALMHGYLQ 334
Query: 360 LHCL----IIRMGYENYEYV-LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+ +I G E + V ++++ Y G++ +A+ + V +IAG
Sbjct: 335 SKMIDDARLIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAG- 393
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y GQ + V + ++ + + VSWN VI+ NG E L+ F MR D T+
Sbjct: 394 YAHDGQMRKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTY 453
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
LSAC+ L L +G H L+ ++ I D+F N LI Y KCG I + ++F+EM
Sbjct: 454 ACCLSACADLAALHVGRQFHSLLARSGYIG-DSFAGNALISAYAKCGRILEARQVFDEMP 512
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
++++W ALI NG A+ FREME +PD V + VL+AC H GL+ EG +
Sbjct: 513 APDIVSWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFD 572
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M + Y + P +HY C+VDLL R G L EA +II M PNA +W L C+
Sbjct: 573 FFNSMTKDYALRPVAEHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGACR 630
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 42/301 (13%)
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+T A+SG ++ A ++ R V N + R G+ + +L ++ R + VSW
Sbjct: 18 LTRLARSGQLAAARRLFDSMP-SRNTVSYNAMLSALARHGRIADARRLFDEIPRRNTVSW 76
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
N +IAAC+ +G + +LF M A D +++ ++S ++ L L +
Sbjct: 77 NAMIAACSDHGRVADARDLFDAMPAR----DGFSWTLMVSCYARAGELGLARDALDRMPG 132
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+ T N +I Y K G +V + EM ++I+W +++ L NG RA++
Sbjct: 133 DKC----TACYNAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVRAVK 188
Query: 560 KFREME--------------------------FLGF-KPDRVALIAVLTACRHGGLVREG 592
F EM F G P+ V+ + +L G + E
Sbjct: 189 FFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYCRAGRIGEA 248
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
ELF+R+ + + ++ ++ +R H++EA K+ T MP N++ W T +
Sbjct: 249 RELFDRI-----PDRNVAAWNVMLSGYLRLSHMEEAYKLFTEMP-DKNSISWTTMISALV 302
Query: 653 R 653
R
Sbjct: 303 R 303
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
+ N + + G + ++ ++F+ M RN +++ A++SAL +G A F E+
Sbjct: 12 YRSNQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIP-- 69
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
+ + V+ A++ AC G V + +LF+ M G + +V R G L
Sbjct: 70 --RRNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFS-----WTLMVSCYARAGELGL 122
Query: 628 AEKIITTMP 636
A + MP
Sbjct: 123 ARDALDRMP 131
>gi|225457491|ref|XP_002267777.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070
[Vitis vinifera]
gi|296087996|emb|CBI35279.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 152/531 (28%), Positives = 249/531 (46%), Gaps = 54/531 (10%)
Query: 141 ESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
E + ++ + +D + G +H +IK L + N ++NMY +C + A K+F
Sbjct: 35 EDLYATLLRRFAETRDSQHGRALHAKLIKGPLHNSLFLNNHILNMYAKCGHLPHAHKLFD 94
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS-- 258
R+ VSW+ +I + AL L+ +M V N+ T V +++C+ N
Sbjct: 95 HFPHRNAVSWSVLIAGFVQHNRPSCALVLFSQMHAAGVNINEFTLVSALHACSLYDNDSD 154
Query: 259 -----------ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
++A V++ E +VF+ + + + L A F K+
Sbjct: 155 NNEGYYYSYYLSRLYQVYAFVVRLGFEWNVFLMNVFMTALIRSRKLAEALEVFEACRGKD 214
Query: 308 IVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF----QLLQLHCL 363
+VSWNA++ G + G +P+ F FS VL A +Q+H
Sbjct: 215 VVSWNAVMAGLVQFCCGEVPGFWRRMCCEGVKPDNFAFSGVLSGLAALGDGGMGVQVHGQ 274
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
+++ G+ + SL+ Y K G + +
Sbjct: 275 LVKCGHGGEVCIGNSLVDMYLKCGSLENG------------------------------- 303
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
+K ++ D+ +WN + A C + G LEL + MR + + + +T + L+AC+
Sbjct: 304 -IKAFEEMVERDVCTWNQMAAGCLNCGKPGRALELIEEMRRSGVRMNKFTLATALTACAN 362
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVC--NMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
L +L G HGL K + +D VC N L+DMY KCGS+G ++K+F + R+V++W
Sbjct: 363 LASLEEGKKAHGLRIK---LGNDVDVCVDNALLDMYAKCGSMGDALKVFGTVEARSVVSW 419
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
T +I NG A++ALE F +M G P+ + I VL AC GGL+ EG E F M+R
Sbjct: 420 TTMIMGFAQNGQARKALEIFEQMRAEGKAPNYITFICVLYACSQGGLINEGWEYFLSMDR 479
Query: 602 SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+G+ P DHY C+VD+L R GH+KEA ++I MPF + L+W+T L C+
Sbjct: 480 DHGISPGEDHYACMVDMLGRAGHIKEARELIRRMPFQASVLVWQTLLGACR 530
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 194/428 (45%), Gaps = 36/428 (8%)
Query: 234 SVDIVFPNQTT----FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
S ++F N T + ++ A ++S G+++HAK+IK L +F+ + +++ YAK
Sbjct: 23 SFRLIFTNSTHDEDLYATLLRRFAETRDSQHGRALHAKLIKGPLHNSLFLNNHILNMYAK 82
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHV 348
C +L AH F ++N VSW+ LI G+ + P+ ++ L ++ G NEFT
Sbjct: 83 CGHLPHAHKLFDHFPHRNAVSWSVLIAGFVQHNRPSCALVLFSQMHAAGVNINEFTLVSA 142
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
L + C + +N E + AFV L V
Sbjct: 143 LHA----------CSLYDNDSDNNEG-----YYYSYYLSRLYQVYAFVVRLGFEWNVFLM 187
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA-----CAHNGDYKEVLELFKYMR 463
N+ R+ + E +++ D+VSWN V+A C EV ++ M
Sbjct: 188 NVFMTALIRSRKLAEALEVFEACRGKDVVSWNAVMAGLVQFCCG------EVPGFWRRMC 241
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ PDN+ F +LS + L + +G +HG + K + + N L+DMY KCGS+
Sbjct: 242 CEGVKPDNFAFSGVLSGLAALGDGGMGVQVHGQLVKCG-HGGEVCIGNSLVDMYLKCGSL 300
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ +K F EM +R+V TW + + G RALE EM G + ++ L LTAC
Sbjct: 301 ENGIKAFEEMVERDVCTWNQMAAGCLNCGKPGRALELIEEMRRSGVRMNKFTLATALTAC 360
Query: 584 RHGGLVREGMELFE-RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
+ + EG + R+ V+ +D + ++D+ + G + +A K+ T+ + +
Sbjct: 361 ANLASLEEGKKAHGLRIKLGNDVDVCVD--NALLDMYAKCGSMGDALKVFGTVE-ARSVV 417
Query: 643 IWRTFLEG 650
W T + G
Sbjct: 418 SWTTMIMG 425
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 131/512 (25%), Positives = 220/512 (42%), Gaps = 85/512 (16%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL-----NPV 56
P RN VS++ +I+ + + AL +F M G +FT L SL +
Sbjct: 97 PHRNAVSWSVLIAGFVQHNRPSCALVLFSQMHAAGVNINEFTLVSALHACSLYDNDSDNN 156
Query: 57 EGA----------QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
EG Q+ A V++ G F + F+ + R L E + VFE K +
Sbjct: 157 EGYYYSYYLSRLYQVYAFVVRLG-FEWNVFLMNVFMTALIRSRKLAEALEVFEACRGKDV 215
Query: 107 VTWNSIVSIFGKHGFVEDC--------MFLFCELVRSEVALTESSFVGVIHGLSNEQDLE 158
V+WN++++ G V+ C + CE V+ + +F GV+ GL+ D
Sbjct: 216 VSWNAVMA-----GLVQFCCGEVPGFWRRMCCEGVKPD----NFAFSGVLSGLAALGDGG 266
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
G Q+HG ++K G E+ + NSLV+MY +C + + K F+++ RDV +WN +
Sbjct: 267 MGVQVHGQLVKCGHGGEVCIGNSLVDMYLKCGSLENGIKAFEEMVERDVCTWNQMAAGCL 326
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
G+ALEL M V N+ T + +CA L + GK H IK + DV
Sbjct: 327 NCGKPGRALELIEEMRRSGVRMNKFTLATALTACANLASLEEGKKAHGLRIKLGNDVDVC 386
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-G 337
V +AL+D YAKC ++ A F + +++VSW +I+G+A + E ++ G
Sbjct: 387 VDNALLDMYAKCGSMGDALKVFGTVEARSVVSWTTMIMGFAQNGQARKALEIFEQMRAEG 446
Query: 338 YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
PN TF VL + ++ GLI++ +
Sbjct: 447 KAPNYITFICVLYAC-------------------------------SQGGLINEGWEYFL 475
Query: 398 ALNIPRAVVPAN----IIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDY 452
+++ + P + + R G E +L+ ++ + ++ W ++ AC +GD
Sbjct: 476 SMDRDHGISPGEDHYACMVDMLGRAGHIKEARELIRRMPFQASVLVWQTLLGACRVHGDV 535
Query: 453 -------KEVLELFKYMRAARIYPDNYTFVSL 477
K+ L L K+ D+ T+V L
Sbjct: 536 ETGLLAAKQALSLDKH--------DSSTYVVL 559
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 119/272 (43%), Gaps = 28/272 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPV-EG 58
M +R+V ++N + + CG AL + M G +FT L +C +L + EG
Sbjct: 310 MVERDVCTWNQMAAGCLNCGKPGRALELIEEMRRSGVRMNKFTLATALTACANLASLEEG 369
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +K G D V ALL +Y + G + + + VF + +S+V+W +++ F +
Sbjct: 370 KKAHGLRIKLGND-VDVCVDNALLDMYAKCGSMGDALKVFGTVEARSVVSWTTMIMGFAQ 428
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + +F ++ A +F+ V++ S G +I G++Y L +
Sbjct: 429 NGQARKALEIFEQMRAEGKAPNYITFICVLYACS-----------QGGLINEGWEYFLSM 477
Query: 179 ANS------------LVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGK 225
+V+M + I A ++ + + + V+ W T++GA +
Sbjct: 478 DRDHGISPGEDHYACMVDMLGRAGHIKEARELIRRMPFQASVLVWQTLLGACRVHGDVET 537
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGLQN 257
L L + ++ + + +T+V + N A +N
Sbjct: 538 GL-LAAKQALSLDKHDSSTYVVLSNMFADGRN 568
>gi|302814959|ref|XP_002989162.1| hypothetical protein SELMODRAFT_129336 [Selaginella moellendorffii]
gi|300143062|gb|EFJ09756.1| hypothetical protein SELMODRAFT_129336 [Selaginella moellendorffii]
Length = 674
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 193/697 (27%), Positives = 330/697 (47%), Gaps = 82/697 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+PD VVS+ S+I YS+ G + A+ + M G P FTFG +L +C + GA
Sbjct: 8 IPD--VVSWTSLIWGYSQRGQWDQAMALLGRMQQEGVAPNSFTFGSILKACKDVEA--GA 63
Query: 60 QLQASVLK---NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR--KSLVTWNSIV- 113
++ +L+ + D +V TAL+G+YG G VF+ +P K++VTW++++
Sbjct: 64 RIHRFLLQVRHGQILYHDVYVATALVGMYGSCGHSAAAREVFDAIPSATKNIVTWSAMLG 123
Query: 114 ---SIFGKHGFVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
S++ + G M LF + + + + F+ V+ SN L G H ++
Sbjct: 124 TNASVWRQQG-----MELFWSFLNDGSLRVDKVVFITVLGLCSN---LTQGCFCHSCALE 175
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
GF + V ++L+ Y +C A ++F ++ +DVVSW ++I A E L L
Sbjct: 176 AGFAADPAVCHALIVTYGRCGSSPLARQVFSEMVRKDVVSWTSMIKAADADE----CLLL 231
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNS----ILGKSIHAKVIKNALECDVFVGSALVD 285
+ +M ++ V PN+ T ++SC+ + LG+ +HA + E DV VG++L++
Sbjct: 232 FRQMLLEGVAPNELTLAEALHSCSLAPDLPATFALGQCVHACARELGYETDVVVGTSLIN 291
Query: 286 FYAKCDNLEGAHLCFSEISNK---NIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPN 341
YAKC L A F ++ N V W A+I A L +QL G PN
Sbjct: 292 MYAKCAALPQAEAIFHLLATNARTNCVCWTAMITANAKAGEWKQAIRLYRQMQLQGIAPN 351
Query: 342 EFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
+F L + + L L+ E GL SD +
Sbjct: 352 RVSFIAALSACSTPEFLATGKLVHSCTVER---------------GLESDTMV------- 389
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY------KEV 455
AN + +Y + G + K+ ++R D V+W+ ++AA A G+ ++
Sbjct: 390 ------ANAVVSMYGKCGSTEDARKMFDGMKRRDSVTWSAMLAAIALAGELDSRARNEQA 443
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG---LIKKTEIISSDTFVCNM 512
L LF M+ + P T VSLL+ CS +LA G +H L ++ + + + N
Sbjct: 444 LLLFASMQLEGVKPTKVTLVSLLNCCS---DLAAGRMIHSRVLLDRRPDGGELEVALWNA 500
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
+++MY +CGS+ S+ + F+ R+ I+W +I+A + A+ F+EM+ G PD
Sbjct: 501 VVNMYARCGSLDSAAREFHGAQARDFISWNGMITASAQHSRWSDAVAYFQEMQQEGVDPD 560
Query: 573 RVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII 632
V ++ +L AC H G V +G F M++ YG+ P ++H CV+D+L R GH++ A++++
Sbjct: 561 EVTMVTLLFACNHAGFVEQGCNYFASMSKDYGLSPRLEHSACVLDMLGRSGHVEVAQEML 620
Query: 633 TTMPFPPNALIWRTFLEGC------QRCRIAKYDTLN 663
+ ++W + L C +R R A L+
Sbjct: 621 KDSAC-SDPVLWTSLLGSCRVHGDLERARAASGQILD 656
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 146/463 (31%), Positives = 240/463 (51%), Gaps = 7/463 (1%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A ++F + D V +NTII A S +AL L+ M + PN+ T +V+ +C
Sbjct: 65 ARRLFDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACTI 124
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
Q ++H ++ L VFVG+AL+ YA +L + F E+ ++N+VSWN++
Sbjct: 125 AQAREHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSM 184
Query: 315 ILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGY 369
I GYA + L E+ + G+ +EFT +L + L++ HC ++ G
Sbjct: 185 IGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGS 244
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
+ +L+ Y K G + A + I ++VV + + G N
Sbjct: 245 RVDLILESALVDMYGKCGDLWMARRCFEMMPI-KSVVSWTSMLCAQTKHGSVNAARCWFD 303
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
+ +IVSWN +I+ G E L+L+ M++ + PD T V++LSA ++ +L +
Sbjct: 304 HMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTV 363
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G +H L + I + D + N L+DMY KCG + +++ +F+EM +RNV++W +I L
Sbjct: 364 GKMVH-LYIRDNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGGLA 422
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
++G A + FR M F PD + +A+L+AC HGGL+ G FE M Y V+ E+
Sbjct: 423 MHGRALDTITFFRSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFESMRHVYNVKHEV 482
Query: 610 DHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+HY C+VDLL R GHL++A +I MP P+ ++W L C+
Sbjct: 483 EHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACR 525
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/496 (25%), Positives = 225/496 (45%), Gaps = 65/496 (13%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA- 59
PDR V +N+II AY +ALR+ M+ RG P +FT ++ +C E A
Sbjct: 75 PDR--VMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACTIAQAREHAL 132
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ L+ GL FVG ALL Y G L + F++M +++V+WNS++ + +
Sbjct: 133 AVHGVALRLGLV-GQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQA 191
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + LF E+ R E + V ++ S E +LE G +H ++ +G +L++
Sbjct: 192 GDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILE 251
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEI-------------------------------RDVV 208
++LV+MY +C +W A + F+ + I R++V
Sbjct: 252 SALVDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIV 311
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
SWN +I + +AL+LY +M + P++ T V V+++ + + +GK +H +
Sbjct: 312 SWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYI 371
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSI 327
N DV + ++L+D YAKC ++ A FSE+ N+N+VSWN +I G A +I
Sbjct: 372 RDNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAMHGRALDTI 431
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
++ + P+ TF +L + LL E ++ S+ Y
Sbjct: 432 TFFRSMVTDSFAPDGITFVALLSACSHGGLL-----------ETGQHYFESMRHVY---- 476
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
N+ V + + R G + V L+ ++ +PD+V W ++ AC
Sbjct: 477 ------------NVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGAC 524
Query: 447 AHNGDYKEVLELFKYM 462
+G+ K ++ K +
Sbjct: 525 RIHGNVKIGRQVIKQL 540
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 134/588 (22%), Positives = 251/588 (42%), Gaps = 74/588 (12%)
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
V G+ AS L +CA A G HG L +F+ +P V +N+I+
Sbjct: 36 VHGSLSAASDLLLASYCALAKAG---------HGVLCHARRLFDGIPGPDRVMYNTIIRA 86
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ + + L ++R + E + V+ + Q E +HG+ ++ G +
Sbjct: 87 YCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACTIAQAREHALAVHGVALRLGLVGQ 146
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V N+L++ Y + + + F ++ R+VVSWN++IG A++ + + L+ M
Sbjct: 147 VFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDTREVCSLFGEMRR 206
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
++ T V ++ +C+ N +G+ +H +++ + D+ + SALVD Y KC +L
Sbjct: 207 QGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWM 266
Query: 296 AHLC-------------------------------FSEISNKNIVSWNALILGYASKSSP 324
A C F + +NIVSWNA+I Y +
Sbjct: 267 ARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQC 326
Query: 325 TSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSY 383
L +Q G P+E T VL +S R+G + +G ++ Y
Sbjct: 327 HEALDLYNQMQSQGLAPDEITLVAVLSAS------------GRIG----DLTVGKMVHLY 370
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
+ + + ++ V N + +Y + GQ + + L S++ ++VSWN++I
Sbjct: 371 IRDNIYNPDVSLV------------NSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVII 418
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
A +G + + F+ M PD TFV+LLSACS L G ++ +
Sbjct: 419 GGLAMHGRALDTITFFRSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFESMRHVYNV 478
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFR 562
+ ++D+ G+ G + +V + EM + +V+ W AL+ A ++G + + +
Sbjct: 479 KHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGRQVIK 538
Query: 563 E-MEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
+ +E G LI+ L H E M+ ++ + +G +M
Sbjct: 539 QLLELEGISGGLFVLISNLLYETHQW---EDMKRLRKLMKEWGTRKDM 583
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 168/353 (47%), Gaps = 42/353 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M DRNVVS+NS+I Y++ G + +F M +GF +FT LL +C +E G
Sbjct: 173 MVDRNVVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIG 232
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYG-------------------------------R 87
+ +L +G D + +AL+ +YG +
Sbjct: 233 RLVHCRMLVSGSR-VDLILESALVDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTK 291
Query: 88 HGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGV 147
HG ++ F+ MP +++V+WN+++S + + G + + L+ ++ +A E + V V
Sbjct: 292 HGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAV 351
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
+ DL G+ +H + N ++ ++ + NSL++MY +C + +A +F ++ R+V
Sbjct: 352 LSASGRIGDLTVGKMVHLYIRDNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNV 411
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH-- 265
VSWN IIG LA + + M D P+ TFV ++++C+ +L H
Sbjct: 412 VSWNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGITFVALLSACS--HGGLLETGQHYF 469
Query: 266 --AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-NIVSWNALI 315
+ + N ++ +V + +VD + +LE A E+ K ++V W AL+
Sbjct: 470 ESMRHVYN-VKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALL 521
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVEGA 59
MP+RN+VS+N++IS Y + G +AL ++ M ++G P + T +LS + +
Sbjct: 305 MPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVG 364
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ +++ ++ D + +LL +Y + G +D +S+F +M +++V+WN I+ H
Sbjct: 365 KMVHLYIRDNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAMH 424
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ-IHGLVIKNGFDYELLV 178
G D + F +V A +FV ++ S+ LE G+ + +E+
Sbjct: 425 GRALDTITFFRSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFESMRHVYNVKHEVEH 484
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
+V++ + + A + K++ ++ DVV W ++GA
Sbjct: 485 YACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGA 523
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/493 (31%), Positives = 241/493 (48%), Gaps = 70/493 (14%)
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
++F + ++W ++I ++L ++ M ++P+ F V+ SCA L
Sbjct: 61 RLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLM 120
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE-------GAHLCFSEISN---- 305
+ LG+S+H +I+ L+ D++ G+AL++ Y+K LE GA F E++
Sbjct: 121 DLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRS 180
Query: 306 ---------------------KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEF 343
K++VSWN +I G A ++ ++ E+ +P+ F
Sbjct: 181 VRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSF 240
Query: 344 TFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
T S VL + + ++H IR G + YV SL+ YAK ++D
Sbjct: 241 TLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVAD-------- 292
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ ++ + L D +SWN +IA C NG + E L F
Sbjct: 293 ------------------------SCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFF 328
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
+ M A+I P +Y+F S++ AC+ L L LG LHG I + + F+ + L+DMY K
Sbjct: 329 RQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGF-DENIFIASSLVDMYAK 387
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
CG+I ++ +IF+ M R++++WTA+I L+G A A+E F +ME G KP+ VA +AV
Sbjct: 388 CGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAV 447
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
LTAC HGGLV E + F M R +G+ P ++HY V DLL R G L+EA I M P
Sbjct: 448 LTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGP 507
Query: 640 NALIWRTFLEGCQ 652
IW T L C+
Sbjct: 508 TGSIWATLLSACR 520
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 187/379 (49%), Gaps = 36/379 (9%)
Query: 6 VVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQA 63
+++ S+I Y+ G +L F+ M+ G P F +L SC L + G L
Sbjct: 71 ALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHG 130
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDE------------------------------ 93
+++ GL D + G AL+ +Y + L+E
Sbjct: 131 YIIRVGLDF-DLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSE 189
Query: 94 --VVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
V +FE MP K LV+WN+I++ ++G E+ + + E+ + + + V+ +
Sbjct: 190 DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLI 249
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
+ D+ G++IHG I+ G D ++ VA+SL++MY +C + + ++F + RD +SWN
Sbjct: 250 AENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWN 309
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
+II ++ F + L + +M + + P +F ++ +CA L LGK +H + +N
Sbjct: 310 SIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN 369
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLL 330
+ ++F+ S+LVD YAKC N+ A F + +++VSW A+I+G A +P +I L
Sbjct: 370 GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELF 429
Query: 331 IELLQLGYRPNEFTFSHVL 349
++ G +PN F VL
Sbjct: 430 EQMETEGIKPNHVAFMAVL 448
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 200/463 (43%), Gaps = 71/463 (15%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+ QL A VLK + + LL +Y L + + +F + + W S++ +
Sbjct: 24 QAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCY 81
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
HG + F ++ S + + F V+ + DL GE +HG +I+ G D++L
Sbjct: 82 TSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDL 141
Query: 177 LVANSLVNMYFQCAGIW--------------------------------SAEKMFKDVEI 204
N+L+NMY + + S K+F+ +
Sbjct: 142 YTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPE 201
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+D+VSWNTII A + + + L + M + P+ T V+ A + GK I
Sbjct: 202 KDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEI 261
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS- 323
H I+ L+ D++V S+L+D YAKC + + F+ ++ ++ +SWN++I G
Sbjct: 262 HGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLF 321
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSL 379
+ ++L +P ++FS ++ + L QLH I R G++ ++ SL
Sbjct: 322 DEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSL 381
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+ YAK G I RT + ++ ++ D+VSW
Sbjct: 382 VDMYAKCGNI---------------------------RTAK-----QIFDRMRLRDMVSW 409
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
+I CA +G + +ELF+ M I P++ F+++L+ACS
Sbjct: 410 TAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACS 452
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 145/255 (56%), Gaps = 3/255 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
MP++++VS+N+II+ +R G E+ LRM M +P FT +L ++++ G
Sbjct: 199 MPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRG 258
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ ++ GL AD +V ++L+ +Y + + + VF + + ++WNSI++ +
Sbjct: 259 KEIHGCSIRQGLD-ADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQ 317
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G ++ + F +++ +++ SF ++ ++ L G+Q+HG + +NGFD + +
Sbjct: 318 NGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFI 377
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
A+SLV+MY +C I +A+++F + +RD+VSW +I A A+EL+ +M + +
Sbjct: 378 ASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGI 437
Query: 239 FPNQTTFVYVINSCA 253
PN F+ V+ +C+
Sbjct: 438 KPNHVAFMAVLTACS 452
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 177/378 (46%), Gaps = 24/378 (6%)
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTF 345
Y+ + L + F+ I ++W ++I Y S P S+ I +L G P+ F
Sbjct: 50 YSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVF 109
Query: 346 SHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDA--------L 393
VL+S L L H IIR+G + Y +LM Y+K + ++
Sbjct: 110 PSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGE 169
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
F R+V ++++ + K+ + D+VSWN +IA A NG Y+
Sbjct: 170 VFDEMTERTRSVRTVSVLS--------EDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYE 221
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
E L + + M A + PD++T S+L ++ +++ G +HG + + + +D +V + L
Sbjct: 222 ETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIR-QGLDADIYVASSL 280
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
IDMY KC + S ++F +T+R+ I+W ++I+ NG L FR+M KP
Sbjct: 281 IDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKS 340
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
+ +++ AC H + G +L + R+ G + + +VD+ + G+++ A++I
Sbjct: 341 YSFSSIMPACAHLTTLHLGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTAKQIFD 399
Query: 634 TMPFPPNALIWRTFLEGC 651
M + + W + GC
Sbjct: 400 RMRL-RDMVSWTAMIMGC 416
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 80/155 (51%), Gaps = 3/155 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+ +R+ +S+NSII+ + G ++ LR F M+ +P ++F ++ +C L + G
Sbjct: 300 LTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG 359
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL + +NG F + F+ ++L+ +Y + G + +F+ M + +V+W +++
Sbjct: 360 KQLHGYITRNG-FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCAL 418
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
HG D + LF ++ + +F+ V+ S+
Sbjct: 419 HGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSH 453
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 236/423 (55%), Gaps = 12/423 (2%)
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK-CDNLEG 295
++ NQ V C +++ + HA +IK+ + F S ++ F A N++
Sbjct: 19 LIISNQPYLSMVDKYCTTMRDL---QQFHAHLIKSGQAIESFAASRILAFCASPLGNMDY 75
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELL-QLGYRPNEFTFSHVLRS-- 351
A+L F ++ N N+ SWN +I G++ S+P +++L I++L P T+ + ++
Sbjct: 76 AYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYS 135
Query: 352 --SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
LA QLH II++G + ++ +++ YA G +S+A V +
Sbjct: 136 QLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNS 195
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+I G+ + G+ +E+ KL ++ + +SWN +I NG +KE L+LF M+ RI P
Sbjct: 196 MILGL-AKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQP 254
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+T VSLL+A +++ L G +H IKK + + V +IDMY KCGSIG+++++
Sbjct: 255 SEFTMVSLLNASAQIGALRQGVWIHEYIKKNNL-QLNAIVVTAIIDMYCKCGSIGNALQV 313
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F ++ R++ +W ++I L +NG + A+ F+ +E KPD ++ +AVLTAC HG +V
Sbjct: 314 FEKIPCRSLSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFMAVLTACNHGAMV 373
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EGME F RM +Y +EP + HY+ +VD++ R G L+EAE+ I TMP +A+IW L
Sbjct: 374 DEGMEFFSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWGCLLS 433
Query: 650 GCQ 652
C+
Sbjct: 434 ACR 436
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 186/431 (43%), Gaps = 71/431 (16%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRH-GCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q A ++K+G ++F + +L G +D VF M +L +WN+++ F +
Sbjct: 42 QFHAHLIKSGQ-AIESFAASRILAFCASPLGNMDYAYLVFLQMQNPNLFSWNTVIRGFSQ 100
Query: 119 HGFVEDCMFLFCE-LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ ++LF + LV S+V ++ + S G Q+HG +IK G ++
Sbjct: 101 SSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAHDGAQLHGRIIKLGLQFDPF 160
Query: 178 VANSLVNMYF-------------------------------QCAGIWSAEKMFKDVEIRD 206
+ N+++ MY +C I + K+F + +++
Sbjct: 161 IRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKCGEIDESRKLFDKMPVKN 220
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
+SWN++IG + F +AL+L+++M + + P++ T V ++N+ A + G IH
Sbjct: 221 PISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQIGALRQGVWIHE 280
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS 326
+ KN L+ + V +A++D Y KC ++ A F +I +++ SWN++I G A
Sbjct: 281 YIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMIFGLAVNGCEKE 340
Query: 327 IFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAK 385
L+ ++L+ +P+ +F VL T+
Sbjct: 341 AILVFKMLESSSLKPDCISFMAVL-------------------------------TACNH 369
Query: 386 SGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWN 440
++ + + F + + + P+ N++ + +R G E + + + D + W
Sbjct: 370 GAMVDEGMEFFSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWG 429
Query: 441 IVIAACAHNGD 451
+++AC G+
Sbjct: 430 CLLSACRIYGN 440
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 116/225 (51%), Gaps = 15/225 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
MP +N +S+NS+I Y R G ++AL++F+ M +P++FT LL+ + +G
Sbjct: 216 MPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQIGALRQG 275
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + KN L +A V TA++ +Y + G + + VFE +P +SL +WNS++
Sbjct: 276 VWIHEYIKKNNL-QLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMIFGLAV 334
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVI----HGLSNEQDLEFGEQIHGLVIKNGFDY 174
+G ++ + +F L S + SF+ V+ HG ++ +EF + +KN +
Sbjct: 335 NGCEKEAILVFKMLESSSLKPDCISFMAVLTACNHGAMVDEGMEFFSR-----MKNTYRI 389
Query: 175 ELLVA--NSLVNMYFQCAGIWSAEKMFKDVEI-RDVVSWNTIIGA 216
E + N +V+M + + AE+ K + I +D + W ++ A
Sbjct: 390 EPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWGCLLSA 434
>gi|302772569|ref|XP_002969702.1| hypothetical protein SELMODRAFT_92471 [Selaginella moellendorffii]
gi|300162213|gb|EFJ28826.1| hypothetical protein SELMODRAFT_92471 [Selaginella moellendorffii]
Length = 689
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 178/665 (26%), Positives = 313/665 (47%), Gaps = 53/665 (7%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQ 62
N+ S+ I++A +R G +AL + MI G P F +L C + +E G
Sbjct: 22 NLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVCFVTILDLCAATADLEQGKVAH 81
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR----KSLVTWNSIVSIFGK 118
A +L G+ + +G AL+ +YG+ LD + F+ M + +VTWNS+++ F
Sbjct: 82 AWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRMEHQDHGRDVVTWNSLLAAFTH 141
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G++E+ LF E+ + + + V+ S ++ G+ H V+ G + +
Sbjct: 142 NGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCSGDRQ---GKLFHDRVLDLGLQGDEFL 198
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD-I 237
NSLV MY +C + + +F+ ++ +D++SWN +I A + +A+EL + ++
Sbjct: 199 MNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLEARLGSSEEAVELLREIDLEGF 258
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P++ TF+ V+++C+ L + L +I V + D+ +G+A+V+ + K L+ A
Sbjct: 259 PEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDDDLLLGNAVVNMFGKSGCLDAAR 318
Query: 298 LCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + KN+VSWN LI GYA + L ++ Q G + N TF +L +
Sbjct: 319 ATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQEGVKANSVTFVSLLDACSTIP 378
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L +LH I G E + V +L+ Y K + L F
Sbjct: 379 ALDFGRELHLRITAAGLELHTVVATALINMYGKC----EELQFAQ--------------- 419
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+LL + + +V+ N++I+A A G + ++ M A + D
Sbjct: 420 -------------ELLERYQSTGLVACNVMISAYAQVGHSERAMKFLHGMDLAGVKADVV 466
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIIS------SDTFVCNMLIDMYGKCGSIGSS 526
T++ L AC+ + + G +++ + T IS + + L+ MY KCG + +
Sbjct: 467 TYIGALEACACSKDFSKGQAVYDRVVSTGWISQLLSSWTSDAIKGALLGMYSKCGCVDDA 526
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
+ ++ R ++ WT++++A G A AL +M+ G PD VA AV+ AC H
Sbjct: 527 LAALQSLSSRGLLAWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHA 586
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
GL+ E + + YG Y CVVD+L R G L+EAE+++ MP+ P++L W
Sbjct: 587 GLLHEALVRLAWVYGDYGTAMGAGLYECVVDVLGRMGRLQEAEELMHAMPYEPDSLAWMA 646
Query: 647 FLEGC 651
L C
Sbjct: 647 LLGAC 651
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 152/598 (25%), Positives = 287/598 (47%), Gaps = 58/598 (9%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQ 62
R+VV++NS+++A++ GY+E+A R+F M G +P+ T +L SC +G
Sbjct: 127 RDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCS--GDRQGKLFH 184
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
VL GL D F+ +L+ +Y R G L+E VF + +K +++WN ++S+ + G
Sbjct: 185 DRVLDLGLQ-GDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLEARLGSS 243
Query: 123 EDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E+ + L E+ + E +F+ V+ S DL+ I LV GFD +LL+ N+
Sbjct: 244 EEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDDDLLLGNA 303
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
+VNM+ + + +A F + +++VVSWN +I A++ + LEL+ +M + V N
Sbjct: 304 VVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQEGVKAN 363
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
TFV ++++C+ + G+ +H ++ LE V +AL++ Y KC+ L+ A
Sbjct: 364 SVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGKCEELQFAQELLE 423
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS---SLAFQL 357
+ +V+ N +I YA + + L G + + T+ L + S F
Sbjct: 424 RYQSTGLVACNVMISAYAQVGHSERAMKFLHGMDLAGVKADVVTYIGALEACACSKDFSK 483
Query: 358 LQ-LHCLIIRMGYENY-------EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
Q ++ ++ G+ + + + G+L+ Y+K G + DALA + +L+ R ++
Sbjct: 484 GQAVYDRVVSTGWISQLLSSWTSDAIKGALLGMYSKCGCVDDALAALQSLS-SRGLLAWT 542
Query: 410 IIAGIYNRTGQYNETVKLLSQLER----PDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+ Y G+ +E +++L Q++ PD V+++ V+ AC+H G E L +R A
Sbjct: 543 SMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHAGLLHEAL-----VRLA 597
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+Y D T A+G+ L+ ++D+ G+ G +
Sbjct: 598 WVYGDYGT--------------AMGAGLY----------------ECVVDVLGRMGRLQE 627
Query: 526 SVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ ++ + M + + + W AL+ A ++G +R L R L++ + A
Sbjct: 628 AEELMHAMPYEPDSLAWMALLGACTVHGDLERGARTAGHEALLDSGSGRYVLLSNMYA 685
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/523 (26%), Positives = 241/523 (46%), Gaps = 39/523 (7%)
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
++G+ G ++ +F + R +L +W I++ ++G + + L ++
Sbjct: 1 MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVC 60
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFD-YELLVANSLVNMYFQCAGIWSAEKMFKDV 202
FV ++ + DLE G+ H ++ G + ++ N+L+NMY +C + A F +
Sbjct: 61 FVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRM 120
Query: 203 EI----RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
E RDVV+WN+++ A + +A L+ M V+ + P+ T V+ SC+G +
Sbjct: 121 EHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCSGDRQ- 179
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI-LG 317
GK H +V+ L+ D F+ ++LV YA+C LE + L F I K+I+SWN +I L
Sbjct: 180 --GKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLE 237
Query: 318 YASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
SS ++ LL E+ G+ P+E TF V+ + L L C I+
Sbjct: 238 ARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDL-CFTIQ---------- 286
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
V++ ++ N + ++ ++G + +L ++
Sbjct: 287 -----------------ELVSSAGFDDDLLLGNAVVNMFGKSGCLDAARATFDRLPVKNV 329
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
VSWN +I+ A N + LELF+ M + ++ TFVSLL ACS + L G LH
Sbjct: 330 VSWNCLISGYAQNLQGRRCLELFRQMDQEGVKANSVTFVSLLDACSTIPALDFGRELHLR 389
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
I + T V LI+MYGKC + + ++ ++ +ISA G ++R
Sbjct: 390 ITAAG-LELHTVVATALINMYGKCEELQFAQELLERYQSTGLVACNVMISAYAQVGHSER 448
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
A++ M+ G K D V I L AC +G +++R+
Sbjct: 449 AMKFLHGMDLAGVKADVVTYIGALEACACSKDFSKGQAVYDRV 491
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 214/451 (47%), Gaps = 45/451 (9%)
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
M+ +C I A ++F + ++ SW I+ A A + +AL L RM + P+
Sbjct: 1 MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVC 60
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV-GSALVDFYAKCDNLEGAHLCFSEI 303
FV +++ CA + GK HA ++ +E V G+AL++ Y KC NL+ A F +
Sbjct: 61 FVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRM 120
Query: 304 SN----KNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL 358
+ +++V+WN+L+ + L + +++ G +P+ T + VL S +
Sbjct: 121 EHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCSGDRQG 180
Query: 359 QL-HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+L H ++ +G + E+++ SL+ YA R
Sbjct: 181 KLFHDRVLDLGLQGDEFLMNSLVKMYA--------------------------------R 208
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI-YPDNYTFVS 476
G+ E+ + +++ DI+SWN++I+ A G +E +EL + + PD TF+S
Sbjct: 209 CGRLEESRLVFRAIDQKDIISWNVMISLEARLGSSEEAVELLREIDLEGFPEPDEVTFIS 268
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
++ ACS L +L L ++ L+ D + N +++M+GK G + ++ F+ + +
Sbjct: 269 VVDACSCLGDLDLCFTIQELVSSAG-FDDDLLLGNAVVNMFGKSGCLDAARATFDRLPVK 327
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
NV++W LIS N +R LE FR+M+ G K + V +++L AC + G EL
Sbjct: 328 NVVSWNCLISGYAQNLQGRRCLELFRQMDQEGVKANSVTFVSLLDACSTIPALDFGRELH 387
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
R+ + G+E H L+ YG +E
Sbjct: 388 LRIT-AAGLEL---HTVVATALINMYGKCEE 414
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 8/222 (3%)
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++ + G ++ L RP++ SW +++AACA NG E L L + M PD
Sbjct: 1 MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVC 60
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FV++L C+ +L G H I + SS + N LI+MYGKC ++ + F+ M
Sbjct: 61 FVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRM 120
Query: 534 TD----RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
R+V+TW +L++A NG+ + A F+EME G KP V L VL +C
Sbjct: 121 EHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCSGD--- 177
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
R+G +LF G++ + + +V + R G L+E+ +
Sbjct: 178 RQG-KLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLV 218
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 12/271 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P +NVVS+N +IS Y++ L +F M G + TF LL +C ++ ++ G
Sbjct: 324 LPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQEGVKANSVTFVSLLDACSTIPALDFG 383
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+L + GL V TAL+ +YG+ L + E LV N ++S + +
Sbjct: 384 RELHLRITAAGLEL-HTVVATALINMYGKCEELQFAQELLERYQSTGLVACNVMISAYAQ 442
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL- 177
G E M + + V +++G + + +D G+ ++ V+ G+ +LL
Sbjct: 443 VGHSERAMKFLHGMDLAGVKADVVTYIGALEACACSKDFSKGQAVYDRVVSTGWISQLLS 502
Query: 178 ------VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
+ +L+ MY +C + A + + R +++W +++ A A +AL +
Sbjct: 503 SWTSDAIKGALLGMYSKCGCVDDALAALQSLSSRGLLAWTSMLAAYAHVGRASEALRVLG 562
Query: 232 RMSVDIVFPNQTTFVYVINSC--AGLQNSIL 260
+M D V P+ F V+ +C AGL + L
Sbjct: 563 QMQHDGVVPDDVAFSAVVFACSHAGLLHEAL 593
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 156/561 (27%), Positives = 278/561 (49%), Gaps = 42/561 (7%)
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
M +++L WN+++ + E M F ++ R E + + +++++G
Sbjct: 1 MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60
Query: 161 EQIHGLVIKN-GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
E IHG + KN +L V +SL+ MY +C + A +MF ++E D+V+W++++ +
Sbjct: 61 EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEK 120
Query: 220 SENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ + +A+E + RM + V P++ T + ++++C L NS LG+ +H V++ D+
Sbjct: 121 NGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLS 180
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLG 337
+ ++L++ YAK + A F ++ K+++SW+ +I Y ++ ++ + E++ G
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDG 240
Query: 338 YRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
PN T VL++ A L+ H L IR G E V +L+ Y K +A
Sbjct: 241 TEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
A + S++ + D+VSW +I+ NG
Sbjct: 301 A--------------------------------VFSRIPKKDVVSWVALISGFTLNGMAH 328
Query: 454 EVLELFKYMR-AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
+E F M PD + +L +CS+L L H + K S+ F+
Sbjct: 329 RSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGF-DSNPFIGAS 387
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM-EFLGFKP 571
L+++Y +CGS+G++ K+FNE+ ++ + WT+LI+ G++G +ALE F M KP
Sbjct: 388 LVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKP 447
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ V +++L+AC H GL+ EG+ +FE M Y + P ++HY +VDLL R G L A +I
Sbjct: 448 NEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELDTAIEI 507
Query: 632 ITTMPFPPNALIWRTFLEGCQ 652
MPF P I T L C+
Sbjct: 508 TKRMPFSPTPQILGTLLGACR 528
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 143/543 (26%), Positives = 259/543 (47%), Gaps = 42/543 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
M R + +N+++ + SR + E + F M +P FT L +C L V+ G
Sbjct: 1 MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + KN +D +VG++L+ +Y + G + E + +F ++ + +VTW+S+VS F K
Sbjct: 61 EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEK 120
Query: 119 HGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G + F + S+V + + ++ + + G +HG V++ GF +L
Sbjct: 121 NGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLS 180
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ NSL+N Y + A +FK + +DV+SW+T+I ++ +AL ++ M D
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDG 240
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
PN T + V+ +CA + G+ H I+ LE +V V +ALVD Y KC + E A+
Sbjct: 241 TEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300
Query: 298 LCFSEISNKNIVSWNALILGYA-SKSSPTSI-FLLIELLQLGYRPNEFTFSHVLRSSLAF 355
FS I K++VSW ALI G+ + + SI I LL+ RP+ VL S
Sbjct: 301 AVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSEL 360
Query: 356 QLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L+ H +I+ G+++ ++ SL+ Y++ G + +A
Sbjct: 361 GFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA------------------- 401
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPD 470
K+ +++ D V W +I +G + LE F +M R++ + P+
Sbjct: 402 -------------SKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPN 448
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF+S+LSACS + G + L+ ++ + +L+D+ G+ G + ++++I
Sbjct: 449 EVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELDTAIEIT 508
Query: 531 NEM 533
M
Sbjct: 509 KRM 511
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 160/536 (29%), Positives = 255/536 (47%), Gaps = 63/536 (11%)
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV--NMYFQCAGIWSAEKMFKDVEIRDVV 208
LS Q + +QIH +IK G L + L+ + + I A +F +E ++
Sbjct: 36 LSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLF 95
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
WN++I L+ S + AL ++RM V PN TF +++ SCA L ++ GK IHA V
Sbjct: 96 IWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHV 155
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFS--------------------------- 301
+K DVF+ ++L++ YA+ + A L F
Sbjct: 156 LKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRAR 215
Query: 302 ----EISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQ 356
E+ K++VSWNA+I GYA LL E + + PNE T VL +
Sbjct: 216 QLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSN 275
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L L G+ M S+ + + L V AL +Y+
Sbjct: 276 ALDL----------------GNSMRSWIEDRGLCSNLKLVNAL------------IDMYS 307
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G +L + D++SWN++I H YKE L LF+ M A+ + P TF+S
Sbjct: 308 KCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLS 367
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+L +C+ L + LG +H I K S T + LID+Y KCG+I ++ ++F+ M +
Sbjct: 368 ILPSCAHLGAIDLGKWIHAYINKN-FNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIK 426
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
++ +W A+I L ++G A +A E F +M G +P+ + + +L+AC+H GLV G + F
Sbjct: 427 SLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFF 486
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M + Y + P+ HY C++DLL R G +EAE ++ M P+ IW + L C+
Sbjct: 487 SSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACR 542
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 146/510 (28%), Positives = 236/510 (46%), Gaps = 65/510 (12%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQ 62
N+ +NS+I S AL F+ MI G EP +TF LL SC L EG Q+
Sbjct: 93 NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHG-------------------------------CL 91
A VLK G F +D F+ T+L+ +Y + G +
Sbjct: 153 AHVLKLG-FVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYM 211
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
D +F++MP K +V+WN++++ + + G ++ + LF ++ ++ V ES+ V V+
Sbjct: 212 DRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSAC 271
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
+ L+ G + + G L + N+L++MY +C + +A ++F D+ RDV+SWN
Sbjct: 272 AQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWN 331
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
+IG ++ +AL L+ M V P + TF+ ++ SCA L LGK IHA + KN
Sbjct: 332 VMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKN 391
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LL 330
+ ++L+D YAKC N+ A F + K++ SWNA+I G A F L
Sbjct: 392 FNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELF 451
Query: 331 IELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
++ G PNE TF +L + H ++ +G + + S++ Y S
Sbjct: 452 SKMSSDGIEPNEITFVGILSAC-------KHAGLVDLGQQFF----SSMVQDYKIS---- 496
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHN 449
P++ +I + R G + E LL +E +PD W ++ AC +
Sbjct: 497 -----------PKSQHYGCMI-DLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDH 544
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
G E+ EL R + PDN LLS
Sbjct: 545 GRV-ELGELVAE-RLFELEPDNPGAYVLLS 572
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 150/600 (25%), Positives = 246/600 (41%), Gaps = 110/600 (18%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYG--RHGCLDEVVSVFEDMPRK 104
L C S+ + Q+ A ++K GL F + L+ R G + +S+F +
Sbjct: 36 LSKCQSIRTFK--QIHAHIIKTGLHNT-LFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92
Query: 105 SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIH 164
+L WNS++ + F ++ S V +F ++ + G+QIH
Sbjct: 93 NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCA---------------------------GIWS--- 194
V+K GF ++ + SL+NMY Q +W
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212
Query: 195 -AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
A ++F ++ ++DVVSWN +I A+ +AL L+ M V PN++T V V+++CA
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACA 272
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
LG S+ + + L ++ + +AL+D Y+KC +L+ A F ++ ++++SWN
Sbjct: 273 QSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNV 332
Query: 314 LILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMG 368
+I GY S ++ L E+L G P E TF +L S + L H I +
Sbjct: 333 MIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNF 392
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
+ SL+ YAK G NI+A Q + +K+
Sbjct: 393 NSVSTSLSTSLIDLYAKCG---------------------NIVAA-----RQVFDGMKIK 426
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
S + SWN +I A +G + ELF M + I P+ TFV +LSAC +
Sbjct: 427 S------LASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVD 480
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
LG + + IS + +ID+ G+ G +F E
Sbjct: 481 LGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAG-------LFEE---------------- 517
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
A + ME KPD ++L ACR G V G + ER+ + +EP+
Sbjct: 518 --------AESLLQNME---VKPDGAIWGSLLGACRDHGRVELGELVAERL---FELEPD 563
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M +R+V+S+N +I Y+ ++AL +F M+ G EPT+ TF +L SC L ++ G
Sbjct: 322 MLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLG 381
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A + KN + T+L+ LY + G + VF+ M KSL +WN+++
Sbjct: 382 KWIHAYINKN-FNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAM 440
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG + LF ++ + E +FVG++ + ++ G+Q +++ DY++
Sbjct: 441 HGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQ---DYKI-- 495
Query: 179 ANSLVNMYFQC-------AGIW-SAEKMFKDVEIR-DVVSWNTIIGA 216
S + ++ C AG++ AE + +++E++ D W +++GA
Sbjct: 496 --SPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGA 540
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 152/526 (28%), Positives = 256/526 (48%), Gaps = 40/526 (7%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
NSL++M+ + + A +F ++ RD VSW ++ L + FG+A++ L M+ D
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA--- 296
P Q T V++SCA Q +G+ +H+ V+K L V V +++++ Y KC + E A
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTV 221
Query: 297 --------------------HL--------CFSEISNKNIVSWNALILGYASKSSPTSIF 328
HL F + ++IVSWNA+I GY
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKAL 281
Query: 329 LLIE--LLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTS 382
L L + P+EFT + VL + + Q+H I+R V +L+++
Sbjct: 282 KLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIST 341
Query: 383 YAKSGLISDALAFV-TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
YAKSG + +A + ++ V+ + Y + G ++ + D+V+W
Sbjct: 342 YAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTA 401
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I NG E ++LF+ M P++YT ++LS C+ L L G +H ++
Sbjct: 402 MIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS- 460
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN-VITWTALISALGLNGFAQRALEK 560
++ + V N +I MY + GS + ++F+++ R ITWT++I AL +G + A+
Sbjct: 461 LLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 520
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
F EM G +PDR+ + VL+AC H G V EG ++++ + + PEM HY C+VDLL
Sbjct: 521 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 580
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYDTLNSTK 666
R G EA++ I MP P+A+ W + L C+ + A+ L + K
Sbjct: 581 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEK 626
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 154/643 (23%), Positives = 270/643 (41%), Gaps = 148/643 (23%)
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGR----HGCLDEVVSVFEDMP--RKSLV 107
NP G + A +K GL A A++ LL YG G L + +F+++P R+++
Sbjct: 41 NPGAGRAIHARAVKAGLL-ASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVF 99
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCEL------------------------VRSEVALTESS 143
TWNS++S+F K G + D +F E+ +++ + +T
Sbjct: 100 TWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADG 159
Query: 144 FVGVIHGLSN-------EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI---- 192
F L+N Q G ++H V+K G + VANS++NMY +C
Sbjct: 160 FTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETAS 219
Query: 193 -------------WS--------------AEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
W+ AE +F+ + R +VSWN +I ++ K
Sbjct: 220 TVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAK 279
Query: 226 ALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA------------------ 266
AL+L+ RM + P++ T V+++CA L N +GK +HA
Sbjct: 280 ALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALI 339
Query: 267 -------------KVIKNALECDVFVGS--ALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
+++ ++E D+ V S AL++ Y K ++E A F ++N+++V+W
Sbjct: 340 STYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAW 399
Query: 312 NALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIR 366
A+I+GY + +I L ++ G PN +T + VL + L Q+HC IR
Sbjct: 400 TAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIR 459
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
E V +++T YA R+G + +
Sbjct: 460 SLLERSSSVSNAIITMYA--------------------------------RSGSFPWARR 487
Query: 427 LLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
+ Q+ R + ++W +I A A +G +E + LF+ M A + PD T+V +LSACS
Sbjct: 488 MFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG 547
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTAL 544
+ G + IK I+ + ++D+ + G + + M + + I W +L
Sbjct: 548 FVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSL 607
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDR----VALIAVLTAC 583
+SA ++ A+ L + + L P+ A+ V +AC
Sbjct: 608 LSACRVHKNAE--LAELAAEKLLSIDPNNSGAYSAIANVYSAC 648
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/494 (23%), Positives = 214/494 (43%), Gaps = 88/494 (17%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--G 58
MP+R+ VS+ ++ +R G +A++ L M GF PTQFT +LS ++ G
Sbjct: 124 MPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVG 183
Query: 59 AQLQASVLKNGL---------------FCADAFVGT---------------ALLGLYGRH 88
++ + V+K GL C DA + A++ L
Sbjct: 184 RKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHL 243
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV-RSEVALTESSFVGV 147
G +D S+FE MP +S+V+WN++++ + ++G + LF ++ S +A E + V
Sbjct: 244 GRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 303
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW-------------- 193
+ +N ++ G+Q+H +++ Y V N+L++ Y + +
Sbjct: 304 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDL 363
Query: 194 -------------------SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
SA +MF + RDVV+W +I ++ +A++L+ M
Sbjct: 364 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 423
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
PN T V++ CA L GK IH + I++ LE V +A++ YA+ +
Sbjct: 424 TCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFP 483
Query: 295 GAHLCFSEIS-NKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A F ++ K ++W ++I+ A ++ L E+L+ G P+ T+ VL +
Sbjct: 484 WARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSAC 543
Query: 353 LAFQLLQLHCLIIRMGYENY-----EYVLGSLMTSY-------AKSGLISDALAFVTALN 400
H + G Y E+ + M+ Y A++GL S+A F+ +
Sbjct: 544 -------SHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMP 596
Query: 401 I-PRAVVPANIIAG 413
+ P A+ ++++
Sbjct: 597 VEPDAIAWGSLLSA 610
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 145/333 (43%), Gaps = 48/333 (14%)
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKS----GLISDALAFVTALNIPRA-VVPANIIAGI 414
+H ++ G Y+ +L++ Y ++ G + DA + + R V N + +
Sbjct: 48 IHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSLLSM 107
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+ ++G+ + + +++ D VSW +++ G + E ++ M A P +T
Sbjct: 108 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 167
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE-- 532
++LS+C+ A+G +H + K + S V N +++MYGKCG ++ +F
Sbjct: 168 TNVLSSCAVTQAGAVGRKVHSFVVKLG-LGSCVPVANSVLNMYGKCGDAETASTVFERMP 226
Query: 533 -----------------------------MTDRNVITWTALISALGLNGFAQRALEKF-R 562
M R++++W A+I+ NG +AL+ F R
Sbjct: 227 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSR 286
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV-- 620
+ PD + +VL+AC + G VR G ++ +Y + EM + V + L+
Sbjct: 287 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVH-----AYILRTEMAYNSQVTNALIST 341
Query: 621 --RYGHLKEAEKII-TTMPFPPNALIWRTFLEG 650
+ G ++ A +I+ +M N + + LEG
Sbjct: 342 YAKSGSVENARRIMDQSMETDLNVISFTALLEG 374
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 36/146 (24%)
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISS---------------------------- 505
+ LL C N G ++H K +++S
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 506 --------DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
+ F N L+ M+ K G + + +F EM +R+ ++WT ++ L G A
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 558 LEKFREMEFLGFKPDRVALIAVLTAC 583
++ +M GF P + L VL++C
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSC 174
>gi|255578711|ref|XP_002530214.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530261|gb|EEF32161.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 834
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 176/612 (28%), Positives = 297/612 (48%), Gaps = 47/612 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINR----GFEPTQFTFGGLLSCDSLNPVEGA 59
+N +S NSIIS YS+ GY DA ++F M + F+P ++TFG L++ G+
Sbjct: 103 KNSISCNSIISVYSQRGYTGDAFQIFSSMQRKHSGFSFKPNEYTFGSLITAAGSAVDSGS 162
Query: 60 QLQASVL----KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
QL +L K+GL +D +VG+AL+ + R G D +FE M ++ V+ NS++
Sbjct: 163 QLLEQMLTMVEKSGLL-SDMYVGSALVSGFSRFGLFDYAKKIFEQMGMRNAVSMNSLMVG 221
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN----EQDLEFGEQIHGLVIKNG 171
E+ +F E+ R+ V + S+V ++ + E+ G ++HG I+ G
Sbjct: 222 LVTQKCGEEAAEVFMEM-RNIVNINLDSYVILLSAFTKFTLLEEGRRKGREVHGFAIRTG 280
Query: 172 F-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
D ++ + N L+NMY +C + A +F+ + RD VSWN++I +SE F A++ Y
Sbjct: 281 LNDIKVAIGNGLINMYAKCGAVDDARSVFRLMNDRDAVSWNSMISGFDQSECFEDAVKCY 340
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
+M + P+ + + ++SCA L +LG+ + ++ +K L+ DV V +AL+ YA+
Sbjct: 341 HKMRRTGLMPSNFSLISTLSSCASLGWIMLGQQLQSEGLKLGLDLDVSVSNALLALYAET 400
Query: 291 DNLEGAHLCFSEISNKNIVSWNALI--LGYASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
L FS + + VS N +I L + S ++ +E+++ G N TF ++
Sbjct: 401 GYLAECRKVFSLMLQFDQVSCNTMIGALANSEVSISEAVEFFLEMMRAGLNLNRVTFINI 460
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
L + + + + +LM Y NI
Sbjct: 461 LAA------------VSSLSQSGLSQQIHALMLKY----------------NIGDDNAIE 492
Query: 409 NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
N + Y R G + K+ S++ R D VSWN +I+ HN + ++L M +
Sbjct: 493 NALLACYGRCGDMDYCEKIFSKMSNRRDEVSWNSMISGYIHNDFLPKAMDLVWIMMQSGQ 552
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
D + ++LSAC+ + L G H + ++ D V + L+DMY KCG I +
Sbjct: 553 RLDTFILATILSACASVATLERGMEAHACSIRA-YLNFDVVVGSALVDMYSKCGRIDYAS 611
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+ F M RN+ +W ++IS +G AL+ F +M+ G PD V + VL+AC H G
Sbjct: 612 RFFESMPLRNLYSWNSMISGYARHGRGDVALQLFTQMKLDGQLPDHVTFVGVLSACSHVG 671
Query: 588 LVREGMELFERM 599
LV EG + F+ M
Sbjct: 672 LVDEGFKHFKSM 683
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 169/669 (25%), Positives = 315/669 (47%), Gaps = 51/669 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP+RN V++ +IS Y+ G ++A +F MI G+ P F FG L +C L G
Sbjct: 1 MPERNCVTWACLISGYNNNGMPKEACGIFKGMILEGYLPNCFAFGAALKACQDLKL--GM 58
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRH-GCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +LK+ D + L+ +YG +D F+++ K+ ++ NSI+S++ +
Sbjct: 59 QIHGLILKSP-NANDVVLSNVLISMYGNSLASIDYARRAFDEIKIKNSISCNSIISVYSQ 117
Query: 119 HGFVEDCMFLFCELVRSEVALT----ESSFVGVIHGLSNEQD--LEFGEQIHGLVIKNGF 172
G+ D +F + R + E +F +I + D + EQ+ +V K+G
Sbjct: 118 RGYTGDAFQIFSSMQRKHSGFSFKPNEYTFGSLITAAGSAVDSGSQLLEQMLTMVEKSGL 177
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
++ V ++LV+ + + A+K+F+ + +R+ VS N+++ L + +A E+++
Sbjct: 178 LSDMYVGSALVSGFSRFGLFDYAKKIFEQMGMRNAVSMNSLMVGLVTQKCGEEAAEVFME 237
Query: 233 MSVDIVFPNQTTFVYVINSCAGL----QNSILGKSIHAKVIKNAL-ECDVFVGSALVDFY 287
M +IV N ++V ++++ + G+ +H I+ L + V +G+ L++ Y
Sbjct: 238 MR-NIVNINLDSYVILLSAFTKFTLLEEGRRKGREVHGFAIRTGLNDIKVAIGNGLINMY 296
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFS 346
AKC ++ A F +++++ VSWN++I G+ S+ ++ ++ + G P+ F+
Sbjct: 297 AKCGAVDDARSVFRLMNDRDAVSWNSMISGFDQSECFEDAVKCYHKMRRTGLMPSNFSLI 356
Query: 347 HVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
L S + + L L + K GL D V
Sbjct: 357 STLSSCASLGWIMLG---------------QQLQSEGLKLGLDLD-------------VS 388
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG-DYKEVLELFKYMRAA 465
+N + +Y TG E K+ S + + D VS N +I A A++ E +E F M A
Sbjct: 389 VSNALLALYAETGYLAECRKVFSLMLQFDQVSCNTMIGALANSEVSISEAVEFFLEMMRA 448
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ + TF+++L+A S L L +H L+ K I D + N L+ YG+CG +
Sbjct: 449 GLNLNRVTFINILAAVSSLSQSGLSQQIHALMLKYN-IGDDNAIENALLACYGRCGDMDY 507
Query: 526 SVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
KIF++M++ R+ ++W ++IS N F +A++ M G + D L +L+AC
Sbjct: 508 CEKIFSKMSNRRDEVSWNSMISGYIHNDFLPKAMDLVWIMMQSGQRLDTFILATILSACA 567
Query: 585 HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
+ GME R+Y + ++ +VD+ + G + A + +MP N W
Sbjct: 568 SVATLERGMEAHACSIRAY-LNFDVVVGSALVDMYSKCGRIDYASRFFESMPL-RNLYSW 625
Query: 645 RTFLEGCQR 653
+ + G R
Sbjct: 626 NSMISGYAR 634
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 17/228 (7%)
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
V+W +I+ +NG KE +FK M P+ + F + L AC +L LG +HGL
Sbjct: 7 VTWACLISGYNNNGMPKEACGIFKGMILEGYLPNCFAFGAALKACQ---DLKLGMQIHGL 63
Query: 497 IKKTEIISSDTFVCNMLIDMYGKC-GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
I K+ ++D + N+LI MYG SI + + F+E+ +N I+ ++IS G+
Sbjct: 64 ILKSP-NANDVVLSNVLISMYGNSLASIDYARRAFDEIKIKNSISCNSIISVYSQRGYTG 122
Query: 556 RALEKFREMEF----LGFKPDRVALIAVLTACRHGGLVREGMELFER---MNRSYGVEPE 608
A + F M+ FKP+ +++TA G V G +L E+ M G+ +
Sbjct: 123 DAFQIFSSMQRKHSGFSFKPNEYTFGSLITAA--GSAVDSGSQLLEQMLTMVEKSGLLSD 180
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG--CQRC 654
M +V R+G A+KI M NA+ + + G Q+C
Sbjct: 181 MYVGSALVSGFSRFGLFDYAKKIFEQMGM-RNAVSMNSLMVGLVTQKC 227
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS 49
MP RN+ S+NS+IS Y+R G + AL++F M G P TF G+LS
Sbjct: 617 MPLRNLYSWNSMISGYARHGRGDVALQLFTQMKLDGQLPDHVTFVGVLS 665
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 142/420 (33%), Positives = 219/420 (52%), Gaps = 9/420 (2%)
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ TF +++ +CA L+ G + A V++ L+ DVFV +A F + +E A
Sbjct: 123 PDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRL 182
Query: 300 FSEISNKNIVSWNALILGYASKSSPTS---IFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F +++VSWN LI GY + +P +F + RP+E T + +
Sbjct: 183 FDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMR 242
Query: 357 LLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L+L H + G ++ +LM Y K G + A + + V +I
Sbjct: 243 DLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIV 302
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
G + + G ++ K+ ++ D+ WN ++ KE L LF M+ A + PD
Sbjct: 303 G-FAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEI 361
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T V+LL+ACS+L L +G +H I+K ++ S + LIDMY KCG+I ++ IF E
Sbjct: 362 TMVNLLTACSQLGALEMGMWVHRYIEKHRLVFS-VALGTSLIDMYAKCGNIEKAIHIFKE 420
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ ++N +TWTA+I L +G A A+E FR M LG KPD + I VL+AC H GLV+EG
Sbjct: 421 IPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEG 480
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
E F M Y +E +M HY C++DLL R GHL EAE+++ TMP P+A++W C+
Sbjct: 481 REFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACR 540
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 211/470 (44%), Gaps = 66/470 (14%)
Query: 20 GYVEDALRMFLYMINRGF-EPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLFCADAF 76
G V L ++ ++ G P TF LL +C L G A VL+ GL +D F
Sbjct: 103 GVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLD-SDVF 161
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE 136
V A G +++ +F+ P + LV+WN+++ + + G + + LF +V +
Sbjct: 162 VVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAED 221
Query: 137 --VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
V E + + + G +DLE G ++HG V +G + + N+L++MY +C +
Sbjct: 222 AVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEM 281
Query: 195 AEKMFKDVEIRDVVSWNTIIGALA-------------------------------ESENF 223
A+ +F+ +E R VVSW T+I A + +
Sbjct: 282 AKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQC 341
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
+AL L+ M V P++ T V ++ +C+ L +G +H + K+ L V +G++L
Sbjct: 342 KEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSL 401
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNE 342
+D YAKC N+E A F EI KN ++W A+I G A+ +I +++LG +P+E
Sbjct: 402 IDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDE 461
Query: 343 FTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
TF VL + H +++ G E + SLM T ++
Sbjct: 462 ITFIGVLSAC-------CHAGLVKEGREFF-----SLME---------------TKYHLE 494
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
R + + + + R G +E +L++ + PD V W + AC G+
Sbjct: 495 RKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQGN 544
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/498 (22%), Positives = 225/498 (45%), Gaps = 14/498 (2%)
Query: 119 HGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
HG V C+ L+ L+RS A + +F ++ + ++ +G+ V++ G D ++
Sbjct: 102 HGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVF 161
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD- 236
V N+ + + A ++F +RD+VSWNT+IG N +ALEL+ RM +
Sbjct: 162 VVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAED 221
Query: 237 -IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+V P++ T + ++ C +++ LG+ +H V + + C V + +AL+D Y KC +LE
Sbjct: 222 AVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEM 281
Query: 296 AHLCFSEISNKNIVSWNALILGYAS---KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A F I ++ +VSW +I+G+A +F E+ + P + ++
Sbjct: 282 AKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVF--DEMPERDVFPWNALMTGYVQCK 339
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL---AFVTALNIPRAVVPAN 409
+ L L + E + +L+T+ ++ G + + ++ + +V
Sbjct: 340 QCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGT 399
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ +Y + G + + + ++ + ++W +I A++G E +E F+ M P
Sbjct: 400 SLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKP 459
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D TF+ +LSAC + G L++ + + +ID+ G+ G + + ++
Sbjct: 460 DEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQL 519
Query: 530 FNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
N M + + + W A+ A + G +L + M+ + P + +L
Sbjct: 520 VNTMPMEPDAVVWGAIFFACRMQG--NISLGEKAAMKLVEIDPSDSGIYVLLANMYAEAN 577
Query: 589 VREGMELFERMNRSYGVE 606
+R+ + M R GVE
Sbjct: 578 MRKKADKVRAMMRHLGVE 595
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 110/217 (50%), Gaps = 5/217 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+R+V +N++++ Y +C ++AL +F M P + T LL+ C L +E G
Sbjct: 320 MPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMG 379
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + K+ L + A +GT+L+ +Y + G +++ + +F+++P K+ +TW +++
Sbjct: 380 MWVHRYIEKHRLVFSVA-LGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLAN 438
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLV-IKNGFDYELL 177
HG + + F ++ E +F+GV+ + ++ G + L+ K + ++
Sbjct: 439 HGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMK 498
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTI 213
+ ++++ + + AE++ + + D V W I
Sbjct: 499 HYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAI 535
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 449 NGDYKEVLELFK-YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
+G + L L++ +R+ PD+ TF LL AC++L G + + + + SD
Sbjct: 102 HGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLG-LDSDV 160
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM--E 565
FV N G + + ++F+ R++++W LI G ALE F M E
Sbjct: 161 FVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAE 220
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMN---RSYGVEPEMDHYHCVVDLLVRY 622
+PD V +IA ++ C G +R+ +EL R++ S GV + + ++D+ ++
Sbjct: 221 DAVVRPDEVTMIAAVSGC---GQMRD-LELGRRLHGFVDSDGVSCTVRLMNALMDMYIKC 276
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEG 650
G L+ A+ + + + W T + G
Sbjct: 277 GSLEMAKSVFERIEH-RTVVSWTTMIVG 303
>gi|255565583|ref|XP_002523781.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536869|gb|EEF38507.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 661
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 161/597 (26%), Positives = 300/597 (50%), Gaps = 42/597 (7%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GA 59
P ++VV N ++ YSR + + +F+ + T +L +C L+ + G
Sbjct: 57 PKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLKACACLSCKKFGI 116
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ +K+G F D VGT+L+ +Y + ++E VF++M +++V+W S++ + +
Sbjct: 117 QVHDYCVKSG-FLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTSLLVGYAHN 175
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL-EFGEQIHGLVIKNGFDYELLV 178
G + + F E+ + +F V+ L++ + + + G QIH +VIKNGF+ + V
Sbjct: 176 GLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIKNGFEATIFV 235
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL+NMY + + +A+ +F ++ RD +SWN+++ + + +A+E++ + + V
Sbjct: 236 CNSLINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMFYHLRLAGV 295
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
F VI SCA ++ + +H +V+K E D + +AL+ Y K ++ A
Sbjct: 296 KLTNFIFSSVIKSCANIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYNKGREIDDAFK 355
Query: 299 CFSEISN-KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
FS + +N+VSW A+I G+ + ++ L E+ + G RPN++TFS +L +
Sbjct: 356 IFSMMYGIRNVVSWTAIISGHLQNGLAEQAVNLFCEMSREGVRPNDYTFSTILAAQPVVS 415
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
++H +I+ YE V +L+ +Y K
Sbjct: 416 PFEVHAQVIKSDYEKSPSVGTALLDAYVK------------------------------- 444
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
G NE K+ +++ DIV+W+ ++A A GD + +++ M + P+ YTF S
Sbjct: 445 -LGNLNEASKVFERIDDKDIVAWSAMVAGYAQTGDTEGAVKILIQMAKKGVEPNEYTFSS 503
Query: 477 LLSACS-KLCNLALGSSLHGLIKKTEIISSDTF-VCNMLIDMYGKCGSIGSSVKIFNEMT 534
+++AC+ + G H K+ +D V + L+ MY K G I S+ ++F
Sbjct: 504 VINACTAPTAAVEQGKQFHAWSIKSRF--NDALCVSSALVTMYAKRGEIESANEVFRRQG 561
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
R++++W +++S +G A++ALE F+EM+ + D V I V++AC H GLV E
Sbjct: 562 VRDLVSWNSMVSGYAQHGHARKALEVFKEMQDQNLELDGVTFIGVISACTHAGLVDE 618
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 153/492 (31%), Positives = 249/492 (50%), Gaps = 47/492 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG---GLLSCDSLNPVE 57
M +RNVVS+ S++ Y+ G +AL F M +P FTF G L+ +
Sbjct: 157 MEERNVVSWTSLLVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADK 216
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ V+KNG F A FV +L+ +Y + G + +VF++M + ++WNS+V+ +
Sbjct: 217 GVQIHTMVIKNG-FEATIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYV 275
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+G + + +F L + V LT F VI +N ++L F Q+HG V+K GF+Y+
Sbjct: 276 ANGLYLEAIEMFYHLRLAGVKLTNFIFSSVIKSCANIKELGFARQLHGQVLKGGFEYDHN 335
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ +L+ Y + I A K+F + IR+VVSW II ++ +A+ L+ MS +
Sbjct: 336 IRTALMVAYNKGREIDDAFKIFSMMYGIRNVVSWTAIISGHLQNGLAEQAVNLFCEMSRE 395
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V PN TF ++ Q + +HA+VIK+ E VG+AL+D Y K NL A
Sbjct: 396 GVRPNDYTFSTIL----AAQPVVSPFEVHAQVIKSDYEKSPSVGTALLDAYVKLGNLNEA 451
Query: 297 HLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA- 354
F I +K+IV+W+A++ GYA + + ++ +LI++ + G PNE+TFS V+ + A
Sbjct: 452 SKVFERIDDKDIVAWSAMVAGYAQTGDTEGAVKILIQMAKKGVEPNEYTFSSVINACTAP 511
Query: 355 ----FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
Q Q H I+ + + V +L+T YAK G I A
Sbjct: 512 TAAVEQGKQFHAWSIKSRFNDALCVSSALVTMYAKRGEIESA------------------ 553
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
++ R G D+VSWN +++ A +G ++ LE+FK M+ + D
Sbjct: 554 -NEVFRRQGVR-------------DLVSWNSMVSGYAQHGHARKALEVFKEMQDQNLELD 599
Query: 471 NYTFVSLLSACS 482
TF+ ++SAC+
Sbjct: 600 GVTFIGVISACT 611
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 131/546 (23%), Positives = 258/546 (47%), Gaps = 50/546 (9%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
+VF+ P++ +V N ++ + ++ + + LF + RS++ S+ V+ +
Sbjct: 51 NVFDRSPKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLKACACLS 110
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
+FG Q+H +K+GF ++ V SLV+MY + + +++F ++E R+VVSW +++
Sbjct: 111 CKKFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTSLLV 170
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQN-SILGKSIHAKVIKNALE 274
A + +ALE + M + PN TF V+ + A + + G IH VIKN E
Sbjct: 171 GYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIKNGFE 230
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIEL 333
+FV ++L++ Y+K ++ A F + ++ +SWN+++ GY + +I + L
Sbjct: 231 ATIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMFYHL 290
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
G + F FS V++S + L QLH +++ G+E + +LM +Y K I
Sbjct: 291 RLAGVKLTNFIFSSVIKSCANIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYNKGREI 350
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
DA + ++ GI N +VSW +I+ N
Sbjct: 351 DDAFKIFS------------MMYGIRN-------------------VVSWTAIISGHLQN 379
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
G ++ + LF M + P++YTF ++L+A + +H + K++ S + V
Sbjct: 380 GLAEQAVNLFCEMSREGVRPNDYTFSTILAAQPVVSPF----EVHAQVIKSDYEKSPS-V 434
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
L+D Y K G++ + K+F + D++++ W+A+++ G + A++ +M G
Sbjct: 435 GTALLDAYVKLGNLNEASKVFERIDDKDIVAWSAMVAGYAQTGDTEGAVKILIQMAKKGV 494
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV----RYGHL 625
+P+ +V+ AC E + F ++ ++ + CV LV + G +
Sbjct: 495 EPNEYTFSSVINACTAPTAAVEQGKQF----HAWSIKSRFNDALCVSSALVTMYAKRGEI 550
Query: 626 KEAEKI 631
+ A ++
Sbjct: 551 ESANEV 556
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 218/464 (46%), Gaps = 48/464 (10%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A+ +F +DVV N ++ + + + + + L++ + + + +T V+ +CA
Sbjct: 49 AQNVFDRSPKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLKACAC 108
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
L G +H +K+ D+ VG++LVD Y K + +E F E+ +N+VSW +L
Sbjct: 109 LSCKKFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTSL 168
Query: 315 ILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL-----RSSLAFQLLQLHCLIIRMG 368
++GYA + ++ E+ +PN FTF+ VL ++A + +Q+H ++I+ G
Sbjct: 169 LVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIKNG 228
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
+E +V SL+ Y+KSG++ +A A +
Sbjct: 229 FEATIFVCNSLINMYSKSGMVKNAKA--------------------------------VF 256
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
+ D +SWN ++A NG Y E +E+F ++R A + N+ F S++ +C+ + L
Sbjct: 257 DNMVTRDAISWNSMVAGYVANGLYLEAIEMFYHLRLAGVKLTNFIFSSVIKSCANIKELG 316
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD-RNVITWTALISA 547
LHG + K D + L+ Y K I + KIF+ M RNV++WTA+IS
Sbjct: 317 FARQLHGQVLKGG-FEYDHNIRTALMVAYNKGREIDDAFKIFSMMYGIRNVVSWTAIISG 375
Query: 548 LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS-YGVE 606
NG A++A+ F EM G +P+ +L A V E+ ++ +S Y
Sbjct: 376 HLQNGLAEQAVNLFCEMSREGVRPNDYTFSTILAA----QPVVSPFEVHAQVIKSDYEKS 431
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
P + ++D V+ G+L EA K+ + + + W + G
Sbjct: 432 PSVG--TALLDAYVKLGNLNEASKVFERID-DKDIVAWSAMVAG 472
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 152/526 (28%), Positives = 257/526 (48%), Gaps = 40/526 (7%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
NSL++M+ + + A +F ++ RD VSW ++ L + FG+A++ L M+ D
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA--- 296
P Q T V++SCA Q +G+ +H+ V+K L V V +++++ Y KC + E A
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTV 221
Query: 297 --------------------HL--------CFSEISNKNIVSWNALILGYASKSSPTSIF 328
HL F + +++IVSWNA+I GY
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKAL 281
Query: 329 LLIE--LLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTS 382
L L + P+EFT + VL + + Q+H I+R V +L+++
Sbjct: 282 KLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIST 341
Query: 383 YAKSGLISDALAFV-TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
YAKSG + +A + ++ V+ + Y + G ++ + D+V+W
Sbjct: 342 YAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTA 401
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I NG E ++LF+ M P++YT ++LS C+ L L G +H ++
Sbjct: 402 MIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS- 460
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN-VITWTALISALGLNGFAQRALEK 560
++ + V N +I MY + GS + ++F+++ R ITWT++I AL +G + A+
Sbjct: 461 LLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 520
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
F EM G +PDR+ + VL+AC H G V EG ++++ + + PEM HY C+VDLL
Sbjct: 521 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 580
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYDTLNSTK 666
R G EA++ I MP P+A+ W + L C+ + A+ L + K
Sbjct: 581 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEK 626
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 154/643 (23%), Positives = 270/643 (41%), Gaps = 148/643 (23%)
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGR----HGCLDEVVSVFEDMP--RKSLV 107
NP G + A +K GL A A++ LL YG G L + +F+++P R+++
Sbjct: 41 NPGAGRAIHARAVKAGLL-ASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVF 99
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCEL------------------------VRSEVALTESS 143
TWNS++S+F K G + D +F E+ +++ + +T
Sbjct: 100 TWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADG 159
Query: 144 FVGVIHGLSN-------EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA------ 190
F L+N Q G ++H V+K G + VANS++NMY +C
Sbjct: 160 FTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETAT 219
Query: 191 -----------GIWS--------------AEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
W+ AE +F+ + R +VSWN +I ++ K
Sbjct: 220 TVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAK 279
Query: 226 ALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA------------------ 266
AL+L+ RM + P++ T V+++CA L N +GK +HA
Sbjct: 280 ALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALI 339
Query: 267 -------------KVIKNALECDVFVGS--ALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
+++ ++E D+ V S AL++ Y K ++E A F ++N+++V+W
Sbjct: 340 STYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAW 399
Query: 312 NALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIR 366
A+I+GY + +I L ++ G PN +T + VL + L Q+HC IR
Sbjct: 400 TAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIR 459
Query: 367 MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
E V +++T YA R+G + +
Sbjct: 460 SLLEQSSSVSNAIITMYA--------------------------------RSGSFPWARR 487
Query: 427 LLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
+ Q+ R + ++W +I A A +G +E + LF+ M A + PD T+V +LSACS
Sbjct: 488 MFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG 547
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTAL 544
+ G + IK I+ + ++D+ + G + + M + + I W +L
Sbjct: 548 FVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSL 607
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDR----VALIAVLTAC 583
+SA ++ A+ L + + L P+ A+ V +AC
Sbjct: 608 LSACRVHKNAE--LAELAAEKLLSIDPNNSGAYSAIANVYSAC 648
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 115/494 (23%), Positives = 214/494 (43%), Gaps = 88/494 (17%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--G 58
MP+R+ VS+ ++ +R G +A++ L M GF PTQFT +LS ++ G
Sbjct: 124 MPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVG 183
Query: 59 AQLQASVLKNGL---------------FCADAFVGT---------------ALLGLYGRH 88
++ + V+K GL C D+ T A++ L
Sbjct: 184 RKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHL 243
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV-RSEVALTESSFVGV 147
G +D S+FE MP +S+V+WN++++ + ++G + LF ++ S +A E + V
Sbjct: 244 GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 303
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW-------------- 193
+ +N ++ G+Q+H +++ Y V N+L++ Y + +
Sbjct: 304 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDL 363
Query: 194 -------------------SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
SA +MF + RDVV+W +I ++ +A++L+ M
Sbjct: 364 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 423
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
PN T V++ CA L GK IH + I++ LE V +A++ YA+ +
Sbjct: 424 TCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFP 483
Query: 295 GAHLCFSEIS-NKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A F ++ K ++W ++I+ A ++ L E+L+ G P+ T+ VL +
Sbjct: 484 WARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSAC 543
Query: 353 LAFQLLQLHCLIIRMGYENY-----EYVLGSLMTSY-------AKSGLISDALAFVTALN 400
H + G Y E+ + M+ Y A++GL S+A F+ +
Sbjct: 544 -------SHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMP 596
Query: 401 I-PRAVVPANIIAG 413
+ P A+ ++++
Sbjct: 597 VEPDAIAWGSLLSA 610
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 146/333 (43%), Gaps = 48/333 (14%)
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKS----GLISDALAFVTALNIPRA-VVPANIIAGI 414
+H ++ G Y+ +L++ Y ++ G + DA + + R V N + +
Sbjct: 48 IHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSLLSM 107
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+ ++G+ + + +++ D VSW +++ G + E ++ M A P +T
Sbjct: 108 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 167
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE-- 532
++LS+C+ A+G +H + K + S V N +++MYGKCG ++ +F
Sbjct: 168 TNVLSSCAVTQAGAVGRKVHSFVVKLG-LGSCVPVANSVLNMYGKCGDSETATTVFERMP 226
Query: 533 -----------------------------MTDRNVITWTALISALGLNGFAQRALEKF-R 562
M DR++++W A+I+ NG +AL+ F R
Sbjct: 227 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 286
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV-- 620
+ PD + +VL+AC + G VR G ++ +Y + EM + V + L+
Sbjct: 287 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVH-----AYILRTEMAYNSQVTNALIST 341
Query: 621 --RYGHLKEAEKII-TTMPFPPNALIWRTFLEG 650
+ G ++ A +I+ +M N + + LEG
Sbjct: 342 YAKSGSVENARRIMDQSMETDLNVISFTALLEG 374
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 36/146 (24%)
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISS---------------------------- 505
+ LL C N G ++H K +++S
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 506 --------DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
+ F N L+ M+ K G + + +F EM +R+ ++WT ++ L G A
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 558 LEKFREMEFLGFKPDRVALIAVLTAC 583
++ +M GF P + L VL++C
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSC 174
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 152/498 (30%), Positives = 248/498 (49%), Gaps = 34/498 (6%)
Query: 161 EQIHGLVIKN--GFDYELLVANSLVNMYFQCAGIWS--AEKMFKDVEIRDVVSWNTIIGA 216
+QIH +IK D +L ++ L + Q I A + + ++ +N II
Sbjct: 39 KQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIRG 98
Query: 217 LAESENFG-KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
LA S N + L +Y +M + P+ T +V+ +CA + G+ +H + IK L
Sbjct: 99 LATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLAS 158
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELL 334
DV+V + L+ YA CD + A F +++VSW +I GY + + L E+
Sbjct: 159 DVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMC 218
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
+ + T VL S L R+G + + Y+
Sbjct: 219 GENLQADGMTLVIVLSSCARLGDL-------RLGRKLHRYI------------------- 252
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
+ N+ V N + +Y + G N K+ ++ ++VSWN +I+ A G +KE
Sbjct: 253 -IRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKE 311
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
L +F+ M+ + PD+ T V++L++C+ L L LG +H + + +I +D F+ N L+
Sbjct: 312 SLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQI-RADGFIGNALV 370
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
DMY KCGSI + +F M ++V ++TA+I L ++G +AL+ F EM +G +PD V
Sbjct: 371 DMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEV 430
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
+ VLTAC H GLV EG + FE M+ Y + P+++HY C+VDLL R G + EAE+ I
Sbjct: 431 TFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRN 490
Query: 635 MPFPPNALIWRTFLEGCQ 652
MP P+A + L C+
Sbjct: 491 MPIEPDAFVLGALLGACK 508
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 156/617 (25%), Positives = 273/617 (44%), Gaps = 95/617 (15%)
Query: 37 FEPTQFTF-GGLLSCDSLNPVEGAQLQASVLKNGLFCADA--FVGTALLGLYGRHGCLDE 93
F P + +F L +C S+ ++ Q+ AS++K + DA + T L L + +D
Sbjct: 18 FNPHKLSFLSTLQTCKSIKGLK--QIHASIIKT-MPSPDAQLTISTRLSALCAQSLPIDP 74
Query: 94 --VVSVFEDMPRKSLVTWNSIV-SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG 150
+S+ + +L +N+I+ + + + + ++ +++ + + V+
Sbjct: 75 RYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKA 134
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
+ + + GE++HG IK G ++ V+N+L+ MY C I SA K+F RD+VSW
Sbjct: 135 CAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSW 194
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
T+I + + + L+ M + + + T V V++SCA L + LG+ +H +I+
Sbjct: 195 TTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIR 254
Query: 271 NA-LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIF 328
N+ + DVFVG+ALVD Y KC + A F E+ KN+VSWN++I G A K S++
Sbjct: 255 NSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLY 314
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYA 384
+ ++ +LG +P++ T VL S +L+L H + R ++ +L+ YA
Sbjct: 315 MFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYA 374
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
K G I A A+N R D+ S+ +I
Sbjct: 375 KCGSIDQACWVFQAMN--------------------------------RKDVYSYTAMIV 402
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
A +G + L+LF M I PD TFV +L+ACS + GL+++
Sbjct: 403 GLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHV----------GLVEEGR--- 449
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD-----RNVITWTALISALGLNGFAQRALE 559
K F +M+ + + ++ LG G A E
Sbjct: 450 -----------------------KYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEE 486
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD-HYHCVVDL 618
R M +PD L A+L AC+ G V G + +++ + +EP D Y + ++
Sbjct: 487 FIRNMP---IEPDAFVLGALLGACKIHGKVELGESVMKKIEK---IEPRKDGAYVLMSNI 540
Query: 619 LVRYGHLKEAEKIITTM 635
++A K+ TM
Sbjct: 541 YSSANRWRDALKLRKTM 557
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 138/254 (54%), Gaps = 2/254 (0%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GA 59
P R++VS+ ++I Y + G+ + + +F M + T +LS C L + G
Sbjct: 187 PQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGR 246
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+L +++N D FVG AL+ +Y + G + VF++MP K++V+WNS++S +
Sbjct: 247 KLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQK 306
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ++ +++F ++ R V + + V V++ +N LE G+ +H + +N + +
Sbjct: 307 GQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIG 366
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+LV+MY +C I A +F+ + +DV S+ +I LA GKAL+L+ M +
Sbjct: 367 NALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIE 426
Query: 240 PNQTTFVYVINSCA 253
P++ TFV V+ +C+
Sbjct: 427 PDEVTFVGVLTACS 440
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP +NVVS+NS+IS ++ G +++L MF M G +P T +L SC +L +E
Sbjct: 288 MPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELG 347
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + L AD F+G AL+ +Y + G +D+ VF+ M RK + ++ +++ H
Sbjct: 348 KWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMH 407
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ 162
G + LF E+ + + E +FVGV+ S+ +E G +
Sbjct: 408 GQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRK 450
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 143/432 (33%), Positives = 224/432 (51%), Gaps = 36/432 (8%)
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
+ +A+ M VF + T+ +I C+ GK +H + E +FV +
Sbjct: 35 DLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVN 94
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPN 341
L++ Y K + LE A F E+ +N+VSW +I Y++K + ++ LI + + G RPN
Sbjct: 95 TLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFREGVRPN 154
Query: 342 EFTFSHVLRSSLAF-QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
FT+S VLR+ L QLHC II+ G E+ +V +L+ Y+K + +AL
Sbjct: 155 MFTYSSVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNAL------- 207
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
G+++ ++ D+V WN +I A N D E L LFK
Sbjct: 208 ------------GVFD-------------EMPTRDLVVWNSIIGGFAQNSDGNEALNLFK 242
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M+ A D T S+L AC+ L L LG +H + K D + N LIDMY KC
Sbjct: 243 RMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK---FDQDLILNNALIDMYCKC 299
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
GS+ + F+ M +++VI+W+ +++ L NG++++ALE F M+ G +P+ + ++ VL
Sbjct: 300 GSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVL 359
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
AC H GLV +G F M + +GV+P +HY C++DLL R G L EA K+I M P+
Sbjct: 360 FACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPD 419
Query: 641 ALIWRTFLEGCQ 652
++ WRT L C+
Sbjct: 420 SVTWRTLLGACR 431
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 217/461 (47%), Gaps = 59/461 (12%)
Query: 2 PDRNVVSFNSIISAYSRCGYVED---ALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEG 58
P R V + +++ ++ + D A+R M G T+ L+ C S G
Sbjct: 13 PLRYVADPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCS---ARG 69
Query: 59 AQLQASVLKNGLFC----ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
A + + +FC FV LL +Y + L+E +F++MP +++V+W +++S
Sbjct: 70 AVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMIS 129
Query: 115 IFGK--HGFVEDCMFL-FCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG 171
+ + C+ L F E VR + T SS + GL N + Q+H +IK G
Sbjct: 130 AYSNKLNDKALKCLILMFREGVRPNM-FTYSSVLRACDGLPNLR------QLHCGIIKTG 182
Query: 172 FDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
+ ++ V ++L+++Y + + + +A +F ++ RD+V WN+IIG A++ + +AL L+
Sbjct: 183 LESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFK 242
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
RM +Q T V+ +C GL LG+ +H V+K + D+ + +AL+D Y KC
Sbjct: 243 RMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCG 300
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLR 350
+LE A+ FS + K+++SW+ ++ G A S ++ L + + G RPN T
Sbjct: 301 SLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYIT------ 354
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
VLG L + +GL+ + ++ V P
Sbjct: 355 ------------------------VLGVLFAC-SHAGLVEKGWYYFRSMKKLFGVDPGRE 389
Query: 411 IAG----IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
G + R G+ +E VKL+ ++E PD V+W ++ AC
Sbjct: 390 HYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGAC 430
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 145/258 (56%), Gaps = 9/258 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP+RNVVS+ ++ISAYS + AL+ + M G P FT+ +L +CD L +
Sbjct: 116 MPERNVVSWTTMISAYSN-KLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLR-- 172
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
QL ++K GL +D FV +AL+ +Y + LD + VF++MP + LV WNSI+ F ++
Sbjct: 173 QLHCGIIKTGLE-SDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQN 231
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + LF + R+ +++ V+ + LE G Q+H V+K FD +L++
Sbjct: 232 SDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILN 289
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L++MY +C + A F + +DV+SW+T++ LA++ +ALEL+ M
Sbjct: 290 NALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSR 349
Query: 240 PNQTTFVYVINSC--AGL 255
PN T + V+ +C AGL
Sbjct: 350 PNYITVLGVLFACSHAGL 367
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 7/231 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP R++V +NSII +++ +AL +F M GF Q T +L +C L +E G
Sbjct: 213 MPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELG 272
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ VLK F D + AL+ +Y + G L++ S F M K +++W+++V+ +
Sbjct: 273 RQVHVHVLK---FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQ 329
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELL 177
+G+ + LF + S + +GV+ S+ +E G + K G D
Sbjct: 330 NGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGRE 389
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKAL 227
L+++ + + A K+ ++E D V+W T++GA N A+
Sbjct: 390 HYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAI 440
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 162/500 (32%), Positives = 257/500 (51%), Gaps = 15/500 (3%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCA-----GIWSAEKMFKDVEIRDVVSWNTIIGAL 217
+H +I +G E L L++ CA + A++MF + + +N++I
Sbjct: 7 LHAQIILHGLTNETLTLGKLISF---CAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGY 63
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
+ S++ A+ L+ RM + PN+ T +V+ +C +H IK + V
Sbjct: 64 SNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLV 123
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQL 336
FV +AL+ Y C + A F +I++K +VSWN++I GYA + FLL ++ +
Sbjct: 124 FVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREW 183
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
G P+ FTF ++L + L L H I G + V +L+ YAK G + A
Sbjct: 184 GMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSA 243
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
A V ++I+ Y + G ++ Q+ ++VSWN +I+ G Y
Sbjct: 244 QAIFDRTQEKNVVSWTSMISA-YAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQY 302
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
+E L+LF MR +R+ PD T VS+L+ACS+L +L +G +H I + T N
Sbjct: 303 REALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLY-NS 361
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
LIDMY KCG + +++ IF EM +N+++W +I AL L+G A++ F EM+ G PD
Sbjct: 362 LIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPD 421
Query: 573 RVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII 632
+ L +L+AC H GLV G+ F+RM Y V E++HY C+VDLL R G L EA ++I
Sbjct: 422 EITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELI 481
Query: 633 TTMPFPPNALIWRTFLEGCQ 652
MP P+ ++W L C+
Sbjct: 482 GRMPMKPDVVVWGALLGACR 501
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 224/504 (44%), Gaps = 78/504 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
+P N +NS+I YS DA+ +F MI G P +FT +L E
Sbjct: 48 IPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEA 107
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +K G+ + FV AL+ +Y G + +F+D+ K+LV+WNS++ +
Sbjct: 108 VLVHGLAIKLGI-GSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAH 166
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ LF ++ + +FV ++ S +DL+ G +H + G +++V
Sbjct: 167 MGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIV 226
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE------------------- 219
N+LV+MY +C + SA+ +F + ++VVSW ++I A A+
Sbjct: 227 RNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNV 286
Query: 220 ------------SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
+ +AL+L+ +M V P++ T V ++ +C+ L + ++GK IH
Sbjct: 287 VSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNY 346
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSI 327
++ N V + ++L+D YAKC + A F E+ KN+VSWN +I A
Sbjct: 347 ILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEA 406
Query: 328 FLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
L E +Q G P+E T L L+++ + S
Sbjct: 407 IKLFEEMQADGTLPDEIT-------------------------------LTGLLSACSHS 435
Query: 387 GLISDALAFVTAL----NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNI 441
GL+ L + + +PR + + + R G E ++L+ ++ +PD+V W
Sbjct: 436 GLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGA 495
Query: 442 VIAACAHNGD-------YKEVLEL 458
++ AC +G+ K++LEL
Sbjct: 496 LLGACRIHGNVEIGKQILKQLLEL 519
>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
Length = 849
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 158/599 (26%), Positives = 291/599 (48%), Gaps = 41/599 (6%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+QA + + F D + ++ YG+ GC+ + VF + ++ +W +++ + ++G
Sbjct: 102 IQAHISHSKRFSGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNG 161
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYELLVA 179
+ + L ++ V + VI +S D + +IH Y++++
Sbjct: 162 HHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLV 221
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+L++MY +C I+ AE +F +D+ N +I A + A+ + R+ +
Sbjct: 222 TALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQ 281
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PNQ T+ + +CA + H I + L DV V +ALV Y++C +LE A
Sbjct: 282 PNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRV 341
Query: 300 FSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQL 357
F + KN+V+WN +I GYA + + ++ L + + G P+E TF +VL S SLA L
Sbjct: 342 FDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHL 401
Query: 358 L---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+H ++ GY++ VL +L+T Y+ G + DA+
Sbjct: 402 AAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDV------------------- 442
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+++ V S ++SW ++ A NG+ + L LF+ M + + TF
Sbjct: 443 ------FHKGVTTHSS-----VISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTF 491
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNE 532
VS + ACS + L G H + ++ + D + LI++YGKCG + ++++F+
Sbjct: 492 VSTIDACSSIGALVEG---HAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHH 548
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
++ +N++TW +++A NG + E +EM+ G +P+ + L+ +L C H GLV +
Sbjct: 549 LSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKA 608
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ F M + + P +HY C+VDLL R G L+E E I++ PF ++++W + L C
Sbjct: 609 VSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSC 667
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 233/492 (47%), Gaps = 54/492 (10%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV-EGAQL 61
++++ N++ISAY + GY DA+ F + G +P Q T+ L + N V A++
Sbjct: 246 NKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARV 305
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
D V TAL+ +Y R G L++ VF+ MP K++VTWN +++ + + G+
Sbjct: 306 AHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGY 365
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ + L+ + + V E +FV V+ S + L G IH V+ G+D L V ++
Sbjct: 366 TDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSA 425
Query: 182 LVNMYFQCAGIWSAEKMF-KDVEIR-DVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
L+ MY C + A +F K V V+SW ++ AL + AL L+ +M ++ V
Sbjct: 426 LITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVK 485
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
N TFV I++C+ + + G +I +VI DV +G++L++ Y KC L+ A
Sbjct: 486 ANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEV 545
Query: 300 FSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F +S KNIV+WN ++ + T S LL E+ G +PNE T
Sbjct: 546 FHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMT-------------- 591
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN----IIAGI 414
L +++ + +GL++ A+++ ++ +VP + + +
Sbjct: 592 -----------------LLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDL 634
Query: 415 YNRTGQYNETVKLLSQLERP---DIVSWNIVIAACAHNGDYKEVLELFKYMRAAR----I 467
R+GQ E +S +P D V W ++ +C + D + + +RAAR +
Sbjct: 635 LGRSGQLEEVEAFISS--KPFSLDSVLWMSLLGSCVIHSDVE------RGLRAARRVLGL 686
Query: 468 YPDNYTFVSLLS 479
P N + LLS
Sbjct: 687 DPKNASPYVLLS 698
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 131/587 (22%), Positives = 258/587 (43%), Gaps = 44/587 (7%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEGAQLQ 62
NV S+ +++AY++ G+ + L + M G P T ++ S + E ++
Sbjct: 146 NVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGDWDEARKIH 205
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
A D + TAL+ +Y + G + VF+ K L N+++S + + G+
Sbjct: 206 ARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYT 265
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
D + F + S + + ++ + + H I + +++V +L
Sbjct: 266 VDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTAL 325
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
V+MY +C + A ++F + ++VV+WN +I A+ +AL+LY+ M V P++
Sbjct: 326 VSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDE 385
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
TFV V+ SC+ ++ G+ IH V+ + + V SAL+ Y+ C +L A F +
Sbjct: 386 ITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHK 445
Query: 303 --ISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTF-SHVLRSSLAFQLL 358
++ +++SW A++ S L + L G + N TF S + S L+
Sbjct: 446 GVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACSSIGALV 505
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
+ H + R+ ++T Y LI VV + +Y +
Sbjct: 506 EGHAIFERV-----------IVTGY----LID--------------VVLGTSLINLYGKC 536
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
G+ + +++ L +IV+WN ++AA + NG+ EL + M P+ T +++L
Sbjct: 537 GRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNML 596
Query: 479 SACSK--LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF--NEMT 534
CS L A+ + + +S+ + C L+D+ G+ G + V+ F ++
Sbjct: 597 FGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGC--LVDLLGRSGQL-EEVEAFISSKPF 653
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ + W +L+ + ++ +R L R + LG P + +L+
Sbjct: 654 SLDSVLWMSLLGSCVIHSDVERGLRAARRV--LGLDPKNASPYVLLS 698
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 141/268 (52%), Gaps = 7/268 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
MP +NVV++N +I+ Y++ GY ++AL++++ M G EP + TF +L SL + G
Sbjct: 345 MPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAG 404
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFED--MPRKSLVTWNSIVSIF 116
+ V+ G + + V +AL+ +Y G L + V VF S+++W ++++
Sbjct: 405 RDIHKHVVDAG-YDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTAL 463
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G + LF ++ V +FV I S+ L G I VI G+ ++
Sbjct: 464 TRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDV 523
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++ SL+N+Y +C + A ++F + +++V+WNTI+ A +++ + EL M +D
Sbjct: 524 VLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLD 583
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSI 264
PN+ T + ++ C+ N ++ K++
Sbjct: 584 GAQPNEMTLLNMLFGCS--HNGLVAKAV 609
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 3/201 (1%)
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+E P + + + D K+ L + + D +VSLL + L
Sbjct: 43 VEEPQAHDYAPLAPPTLSDEDVKQRLASLEEQNQKSDFVDPAAYVSLLKQAGDVTAL--- 99
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
++ I ++ S D + N +++ YGKCG + + +F+ + NV +WT L++A
Sbjct: 100 KTIQAHISHSKRFSGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQ 159
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
NG + LE R+M+ LG P+ V L V+ A G E ++ R + + ++
Sbjct: 160 NGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVV 219
Query: 611 HYHCVVDLLVRYGHLKEAEKI 631
++D+ + G + AE +
Sbjct: 220 LVTALIDMYAKCGDIFHAEVV 240
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 160/526 (30%), Positives = 270/526 (51%), Gaps = 29/526 (5%)
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA-----GIWSAEKMFKDV 202
I L N + ++ +QI + + G + + N L M F CA + AEK+F V
Sbjct: 101 IECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKL--MAF-CADSSLGNLRYAEKIFNYV 157
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
+ + +N ++ A+ K L L+ ++ D ++P+ T+ +V+ + L++ G+
Sbjct: 158 QDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGE 217
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-K 321
+ ++K ++ D +V ++L+D Y + N+E A F E++ ++ VSWN +I GY +
Sbjct: 218 KVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCR 277
Query: 322 SSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV---LG 377
+I E+ Q G +P+E T L + A + L+L G E + YV LG
Sbjct: 278 RFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLEL-------GDEIHNYVRKELG 330
Query: 378 -------SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+L+ YAK G ++ A +++ + ++I+G N G E L +
Sbjct: 331 FTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYIN-CGDLREARDLFDK 389
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
D+V W +I + + + LF+ M+ +I PD +T V+LL+ C++L L G
Sbjct: 390 SPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQG 449
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+HG + + I + D V LI+MY KCG + S++IF E+ D++ +WT++I L +
Sbjct: 450 KWIHGYLDENRI-TMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAM 508
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
NG AL F EME +G KPD + I VL+AC HGGLV EG F M + + +EP+++
Sbjct: 509 NGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVE 568
Query: 611 HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRI 656
HY CV+DLL R G L EAE++I +P ++ + CRI
Sbjct: 569 HYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRI 614
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 139/553 (25%), Positives = 251/553 (45%), Gaps = 58/553 (10%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGL------------FCADAFVGTALLGLYGRHGCLDEV 94
L +C S++ ++ Q+Q+ + + GL FCAD+ +G L
Sbjct: 104 LRNCKSMDQLK--QIQSQIFRIGLEGDRDTINKLMAFCADSSLGN-----------LRYA 150
Query: 95 VSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE 154
+F + SL +N +V I+ K G + + LF +L + ++ V+ +
Sbjct: 151 EKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCL 210
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+D+ GE++ G ++K G D + V NSL++MY++ + + +A+K+F ++ RD VSWN +I
Sbjct: 211 RDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMI 270
Query: 215 GALAESENFGKALELYLRMSVD-IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
F A+ + M + P++ T V +++C L+N LG IH ++ L
Sbjct: 271 SGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIH-NYVRKEL 329
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-----------KS 322
+ +AL+D YAKC L A F E+S KN++ W ++I GY +
Sbjct: 330 GFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDK 389
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTS 382
SP +L + GY F H + F+ +Q+ + + ++ + +L+T
Sbjct: 390 SPVRDVVLWTAMINGY----VQFHHFDDAVALFREMQIQKI------KPDKFTVVTLLTG 439
Query: 383 YAKSGLISDAL---AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
A+ G + ++ I VV + +Y++ G ++++++ +LE D SW
Sbjct: 440 CAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASW 499
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+I A NG E L LF M PD+ TF+ +LSACS + G +KK
Sbjct: 500 TSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKK 559
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN----VITWTALISALGLNG--- 552
I +ID+ G+ G + + ++ E+ N V + AL+SA ++
Sbjct: 560 VHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVD 619
Query: 553 FAQRALEKFREME 565
+R +K +E
Sbjct: 620 MGERLAKKLENIE 632
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 142/287 (49%), Gaps = 36/287 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLLS-CDSLNPVE- 57
M R+ VS+N +IS Y RC EDA+ F M G E P + T LS C +L +E
Sbjct: 258 MTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLEL 317
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS--- 114
G ++ V K F + ALL +Y + GCL+ ++F++M K+++ W S++S
Sbjct: 318 GDEIHNYVRKELGFTTR--IDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYI 375
Query: 115 ----------IFGK-------------HGFVE-----DCMFLFCELVRSEVALTESSFVG 146
+F K +G+V+ D + LF E+ ++ + + V
Sbjct: 376 NCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVT 435
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
++ G + LE G+ IHG + +N +++V +L+ MY +C + + ++F ++E +D
Sbjct: 436 LLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKD 495
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
SW +II LA + +AL L+ M P+ TF+ V+++C+
Sbjct: 496 TASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACS 542
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 135/299 (45%), Gaps = 38/299 (12%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQ 60
P R+VV + ++I+ Y + + +DA+ +F M + +P +FT LL+ C L +E +
Sbjct: 391 PVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGK 450
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L D VGTAL+ +Y + GC+D+ + +F ++ K +W SI+ +G
Sbjct: 451 WIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNG 510
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + LF E+ R + +F+GV+ S HG +++ G +
Sbjct: 511 KTSEALRLFSEMERVGAKPDDITFIGVLSACS-----------HGGLVEEGRRF------ 553
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD---I 237
+++ K +E + V + +I L + +A EL + ++ I
Sbjct: 554 ------------FNSMKKVHRIEPK-VEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEI 600
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P + ++++C N +G+ + AK ++N CD + + L + YA D E A
Sbjct: 601 VVP---LYGALLSACRIHNNVDMGERL-AKKLENIESCDSSIHTLLANIYASVDRWEDA 655
>gi|414887787|tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea mays]
Length = 711
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 174/609 (28%), Positives = 288/609 (47%), Gaps = 46/609 (7%)
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGR--HGCLDEVVSVFEDMPRKSLVTWNSIV 113
E +L A++L G + + L+ Y R G L V VF+ MP ++ WN+++
Sbjct: 74 TEVRRLHAALLVRG-YHRSTVLAAQLVRAYARMRDGGLGHAVRVFDGMPTRNSFAWNAVI 132
Query: 114 SIFGKHGFVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLV---IK 169
G + + + ++VR V ++ V+ + ++E G ++ V I
Sbjct: 133 KGLVDAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRKVQENVETDIA 192
Query: 170 NGFDY-ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
G + V +LV+M+ +C + A MF+ + +RD+ SW +IG ++ + +
Sbjct: 193 RGIAKGNVFVQCALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIGGAVRGGDWLEVMT 252
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
L RM + P+ F VI +C ++ G ++H +K + D+ V +ALVD Y
Sbjct: 253 LLKRMKSEGFRPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDDICVPNALVDMYC 312
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSH 347
KC L+ A F I +K++ SW+ +I G++ ++ S+ L E++ G +PN T +
Sbjct: 313 KCARLDMAASLFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVASGIKPNSTTIAS 372
Query: 348 VLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
+L S +LL ++HC +R E+ E++ +L+ Y + G I DA I
Sbjct: 373 ILPSISELRLLRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYIRDA-------QIVF 425
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
P N D+V N +I N D + L L + +
Sbjct: 426 EFKPKN-------------------------DLVVLNSMIRGYVVNKDSESALRLLRALL 460
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ PD+ T VS+L C++ L G LH + I SS V N L DMY KCG +
Sbjct: 461 KEGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHNI-SSCFSVTNALTDMYCKCGCL 519
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ KIF MT+RN +T+ LIS+LG +G A +A F M+ G PD+V +A+L+ C
Sbjct: 520 EIANKIFLLMTERNTVTYNTLISSLGKHGHADQAFILFDLMKRDGVSPDKVTFVALLSCC 579
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
HGGL+ +G+ ++ M R Y + P+ +HY C+VDL R G L +A I + P +
Sbjct: 580 SHGGLIDKGLCFYDSMLRDYNIPPDKEHYSCIVDLYSRSGKLDDAWSFIANLQEVPEIDV 639
Query: 644 WRTFLEGCQ 652
L C+
Sbjct: 640 LGCLLSACR 648
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 146/535 (27%), Positives = 255/535 (47%), Gaps = 45/535 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLL-SCDSLNPVE- 57
MP RN ++N++I G +ALR + M+ G +FT+ +L +C +L VE
Sbjct: 120 MPTRNSFAWNAVIKGLVDAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQ 179
Query: 58 GAQLQASV---LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
G ++Q +V + G+ + FV AL+ ++ + GCL E ++FE M + L +W +++
Sbjct: 180 GRKVQENVETDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIG 239
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESS-FVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
+ G + M L + ++SE +S F VI ++L G +HG +K G
Sbjct: 240 GAVRGGDWLEVMTLL-KRMKSEGFRPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVG 298
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
++ V N+LV+MY +CA + A +F ++ +DV SW+TII +++ + ++ L+ M
Sbjct: 299 DDICVPNALVDMYCKCARLDMAASLFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEM 358
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ PN TT ++ S + L+ GK IH ++N LE F+ SAL+DFY + +
Sbjct: 359 VASGIKPNSTTIASILPSISELRLLRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYI 418
Query: 294 EGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVL--- 349
A + F ++V N++I GY +K S +++ LL LL+ G RP+ T VL
Sbjct: 419 RDAQIVFEFKPKNDLVVLNSMIRGYVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLC 478
Query: 350 -RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ S Q +LH IR + V +L Y K G + A
Sbjct: 479 NQPSRLLQGKELHAYAIRHNISSCFSVTNALTDMYCKCGCLEIA---------------- 522
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
N+ L+++ + V++N +I++ +G + LF M+ +
Sbjct: 523 -------------NKIFLLMTER---NTVTYNTLISSLGKHGHADQAFILFDLMKRDGVS 566
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
PD TFV+LLS CS + G + + + I D + ++D+Y + G +
Sbjct: 567 PDKVTFVALLSCCSHGGLIDKGLCFYDSMLRDYNIPPDKEHYSCIVDLYSRSGKL 621
>gi|334187761|ref|NP_197403.2| mitochondrial editing factor 18 [Arabidopsis thaliana]
gi|223635651|sp|P0C8Q8.1|PP394_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g19020, mitochondrial; Flags: Precursor
gi|332005257|gb|AED92640.1| mitochondrial editing factor 18 [Arabidopsis thaliana]
Length = 685
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 162/588 (27%), Positives = 279/588 (47%), Gaps = 73/588 (12%)
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA----- 190
E + TE + V + ++ D+ G QIH V+K+G D + NS++NMY +C
Sbjct: 36 ESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADA 95
Query: 191 --------------------------GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
+W A K+F + R VS+ T+I A++ +
Sbjct: 96 ESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWS 155
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
+A+EL+ M + N+ T VI++C+ L + + + IK LE VFV + L+
Sbjct: 156 EAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLL 215
Query: 285 DFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS------------------------ 320
Y C L+ A F E+ +N+V+WN ++ GY+
Sbjct: 216 HMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGT 275
Query: 321 --------KSSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMG 368
++ E+L+ G +P+E +L RS + + LQLH I++ G
Sbjct: 276 MIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRG 335
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
++ Y+++ +++ YA S I AL A ++ + N + + + G + ++
Sbjct: 336 FDCYDFLQATIIHFYAVSNDIKLALQQFEA-SVKDHIASRNALIAGFVKNGMVEQAREVF 394
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCNL 487
Q DI SWN +I+ A + + L LF+ M ++++ PD T VS+ SA S L +L
Sbjct: 395 DQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSL 454
Query: 488 ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE---MTDRNVITWTAL 544
G H + + I +D +IDMY KCGSI +++ IF++ ++ + W A+
Sbjct: 455 EEGKRAHDYLNFSTIPPNDNLTA-AIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAI 513
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I +G A+ AL+ + +++ L KP+ + + VL+AC H GLV G FE M +G
Sbjct: 514 ICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHG 573
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+EP++ HY C+VDLL + G L+EA+++I MP + +IW L +
Sbjct: 574 IEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASR 621
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 187/428 (43%), Gaps = 68/428 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP+R+ VS+ ++I Y++ +A+ +F M N G + T ++S C L +
Sbjct: 133 MPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDC 192
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ S+ FV T LL +Y CL + +F++MP ++LVTWN +++ + K
Sbjct: 193 RMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKA 252
Query: 120 GFVEDCMFLF-------------------------------CELVRSEVALTESSFVGVI 148
G +E LF E++R + +E V ++
Sbjct: 253 GLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLL 312
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFD-YELLVA---------------------------- 179
+ G Q+HG ++K GFD Y+ L A
Sbjct: 313 SASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIA 372
Query: 180 --NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVD 236
N+L+ + + + A ++F +D+ SWN +I A+S + AL L+ M S
Sbjct: 373 SRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSS 432
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+ T V V ++ + L + GK H + + + + + +A++D YAKC ++E A
Sbjct: 433 QVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETA 492
Query: 297 HLCFSE---ISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
F + IS+ I WNA+I G A+ + ++ L +L L +PN TF VL +
Sbjct: 493 LNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSAC 552
Query: 353 LAFQLLQL 360
L++L
Sbjct: 553 CHAGLVEL 560
>gi|218199277|gb|EEC81704.1| hypothetical protein OsI_25308 [Oryza sativa Indica Group]
Length = 749
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/485 (32%), Positives = 245/485 (50%), Gaps = 43/485 (8%)
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L +L+ Y + + A+ +F + R V+WNT+I A S G A+ + RM+
Sbjct: 94 LFATTALLAFYCRSRRLPEAQHLFDQMPARTAVTWNTLIHGHARSAAPGLAVAAFARMAR 153
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V P ++ V+ +C L+++ G ++H+ + + V VG+ALVD YAKC +L
Sbjct: 154 AGVSPTASSVSSVLVACVRLEDAAAGATLHSVGLMHGFCASVVVGTALVDMYAKCHHLGA 213
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLA 354
A F E+ KN+ ++ AL+ G+ P LL+ E+ + G PN T+S +L S +
Sbjct: 214 AQQVFREMEEKNVATFTALVAGFVLSRRPHDAMLLVREMERSGVAPNLMTYSSLLSSFAS 273
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ + Q+HC +++ G E+ ++VL +L+T Y+K G++ D
Sbjct: 274 PEDIDHGKQVHCAVLKKGLEHDQFVLSALVTMYSKCGILED------------------- 314
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
VK+ + D VS+N VI+ + G KE + F MR D
Sbjct: 315 -------------FVKVQMSVSCQDQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMD 361
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV--CNMLIDMYGKCGSIGSSVK 528
+TF S+L A +L G +H LI K I D+ V N LI MY + G+IG S
Sbjct: 362 VFTFASVLKAIGSSSSLLEGRQVHTLILK---IGYDSVVDVQNSLISMYARHGAIGESNG 418
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F M N+++W +L+S +G + +E F +M L +PD + ++VLTAC H GL
Sbjct: 419 VFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGL 478
Query: 589 VREGMELFERM-NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
V +G+E F M ++ Y V +HY C+VDLL R G+L EAE +I MP P A ++R
Sbjct: 479 VDKGLEYFNLMKDKGYLVGARTEHYACMVDLLGRAGYLNEAEYLINGMPIKPGASVYRAL 538
Query: 648 LEGCQ 652
L CQ
Sbjct: 539 LSACQ 543
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 246/493 (49%), Gaps = 39/493 (7%)
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K G ++ F TALL Y R L E +F+ MP ++ VTWN+++ + +
Sbjct: 86 KLGFLASNLFATTALLAFYCRSRRLPEAQHLFDQMPARTAVTWNTLIHGHARSAAPGLAV 145
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
F + R+ V+ T SS V+ +D G +H + + +GF ++V +LV+MY
Sbjct: 146 AAFARMARAGVSPTASSVSSVLVACVRLEDAAAGATLHSVGLMHGFCASVVVGTALVDMY 205
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+C + +A+++F+++E ++V ++ ++ S A+ L M V PN T+
Sbjct: 206 AKCHHLGAAQQVFREMEEKNVATFTALVAGFVLSRRPHDAMLLVREMERSGVAPNLMTYS 265
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
+++S A ++ GK +H V+K LE D FV SALV Y+KC LE +S +
Sbjct: 266 SLLSSFASPEDIDHGKQVHCAVLKKGLEHDQFVLSALVTMYSKCGILEDFVKVQMSVSCQ 325
Query: 307 NIVSWNALILGYASKSSPTSIFL-LIELLQLGYRPNEFTFSHVLR----SSLAFQLLQLH 361
+ VS+N++I G + F +E+ + G + FTF+ VL+ SS + Q+H
Sbjct: 326 DQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASVLKAIGSSSSLLEGRQVH 385
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
LI+++GY++ V SL++ YA+ G I
Sbjct: 386 TLILKIGYDSVVDVQNSLISMYARHGAI-------------------------------- 413
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
E+ + +E P++VSWN +++ CA +G KEV+E+F+ MR + PD+ TF+S+L+AC
Sbjct: 414 GESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTAC 473
Query: 482 SKLCNLALGSSLHGLIK-KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVI 539
S + + G L+K K ++ + T ++D+ G+ G + + + N M +
Sbjct: 474 SHVGLVDKGLEYFNLMKDKGYLVGARTEHYACMVDLLGRAGYLNEAEYLINGMPIKPGAS 533
Query: 540 TWTALISALGLNG 552
+ AL+SA ++G
Sbjct: 534 VYRALLSACQIHG 546
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 132/255 (51%), Gaps = 3/255 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
M ++NV +F ++++ + DA+ + M G P T+ LLS + G
Sbjct: 221 MEEKNVATFTALVAGFVLSRRPHDAMLLVREMERSGVAPNLMTYSSLLSSFASPEDIDHG 280
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +VLK GL D FV +AL+ +Y + G L++ V V + + V++NS++S
Sbjct: 281 KQVHCAVLKKGLE-HDQFVLSALVTMYSKCGILEDFVKVQMSVSCQDQVSFNSVISGLSC 339
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ F E+ R + +F V+ + + L G Q+H L++K G+D + V
Sbjct: 340 LGRGKEAFQHFLEMRRHGTDMDVFTFASVLKAIGSSSSLLEGRQVHTLILKIGYDSVVDV 399
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY + I + +F +E ++VSWN+++ A+ + + +E++ +M V
Sbjct: 400 QNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHV 459
Query: 239 FPNQTTFVYVINSCA 253
P+ TF+ V+ +C+
Sbjct: 460 QPDHITFLSVLTACS 474
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 145/300 (48%), Gaps = 23/300 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQL 61
++ VSFNS+IS S G ++A + FL M G + FTF +L S + +EG Q+
Sbjct: 325 QDQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASVLKAIGSSSSLLEGRQV 384
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+LK G + + V +L+ +Y RHG + E VF M +LV+WNS++S +HG
Sbjct: 385 HTLILKIG-YDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGH 443
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ + +F ++ R V +F+ V+ S+ ++ G + L+ G+ L+ A +
Sbjct: 444 GKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMKDKGY---LVGART 500
Query: 182 -----LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+V++ + + AE + + I+ S + AL + LE+ +R+S
Sbjct: 501 EHYACMVDLLGRAGYLNEAEYLINGMPIKPGAS---VYRALLSACQIHGNLEIVIRVSKR 557
Query: 237 IVFPN---QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
++ N + V + N+ AG G+ +A I+ A+ + G +L DF K N+
Sbjct: 558 LIELNPHDSSVHVQLSNAFAG-----DGRWGNAAEIREAMS-EYMSGGSLYDFLHKQHNV 611
>gi|125591533|gb|EAZ31883.1| hypothetical protein OsJ_16048 [Oryza sativa Japonica Group]
Length = 674
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 168/595 (28%), Positives = 296/595 (49%), Gaps = 52/595 (8%)
Query: 75 AFVGTALLGLYG-----RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
A + +LL LY R +D V +F+ MP++++V+WN++ + K G ++ + LF
Sbjct: 12 AVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELF 71
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY--ELLVANSLVNMYF 187
++ T SFV + + D + Q++GL++K G +Y +L V +S ++M+
Sbjct: 72 VRMLEDGFRPTPVSFVNIFPAAVAD-DPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFS 130
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP-NQTTFV 246
+ + SA ++F ++ WNT+I ++ F +A++L+ ++ P + TF+
Sbjct: 131 EFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFL 190
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALEC-DVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
+ + + Q+ LG+ +H +IK V +G+ALV Y++C N++ A F +
Sbjct: 191 SALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPE 250
Query: 306 KNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLLQL---- 360
K+IV+WN ++ + LL+ E+ + G+ + T + VL +S LQ+
Sbjct: 251 KDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQA 310
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL-AFVTALNIPRAVVPANIIAGIYNRTG 419
H +IR G E E + L+ YAKSG + A F + N R
Sbjct: 311 HGYLIRHGIEG-EGLESYLIDMYAKSGRVEMAQRVFDSFKNAKR---------------- 353
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
D V+WN +IA +G ++ + +F+ M A + P + T S+L
Sbjct: 354 ---------------DEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLP 398
Query: 480 ACSKLCN-LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
AC + + G +H + + ++ FV LIDMY KCG I ++ +F MT ++
Sbjct: 399 ACDPVGGGVYSGKQIHCFAVR-RCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKST 457
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
+T+T +IS LG +GF ++AL F M+ G KPD V ++ ++AC + GLV EG+ L+
Sbjct: 458 VTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRS 517
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN-ALIWRTFLEGCQ 652
M+ S+G+ H+ CV DLL + G ++EA + I + N IW + L C+
Sbjct: 518 MD-SFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCK 571
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/583 (24%), Positives = 276/583 (47%), Gaps = 53/583 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCD-SLNPVEGA 59
MP RNVVS+N++ Y + G ++AL +F+ M+ GF PT +F + + +P
Sbjct: 43 MPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVADDPSWPF 102
Query: 60 QLQASVLKNGL-FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL ++K G+ + D FV ++ + ++ G + VF+ +K+ WN++++ + +
Sbjct: 103 QLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQ 162
Query: 119 HGFVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL- 176
+G + + LF +++ S EV L +F+ + S QD+ G+Q+HG +IK G L
Sbjct: 163 NGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIK-GMHRTLP 221
Query: 177 -LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
++ N+LV MY +C + +A +F + +D+V+WNT++ A +++ + L L M
Sbjct: 222 VILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQK 281
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ T V+++ + + +GK H +I++ +E + + S L+D YAK +E
Sbjct: 282 SGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGE-GLESYLIDMYAKSGRVEM 340
Query: 296 AHLCFSEISN--KNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRS- 351
A F N ++ V+WNA+I GY P +I + +L+ G P T + VL +
Sbjct: 341 AQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPAC 400
Query: 352 ----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ Q+HC +R + +V +L+ Y+K G I+ A
Sbjct: 401 DPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTA--------------- 445
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
N+ G+ ++ V++ +I+ +G K+ L LF M+ +
Sbjct: 446 ENVFGGMTGKS-----------------TVTYTTMISGLGQHGFGKKALALFNSMQEKGL 488
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD TF+S +SAC+ + G +L+ + I ++ C + D+ K G + +
Sbjct: 489 KPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHC-CVADLLAKAGRVEEAY 547
Query: 528 KIFNEMTDRN--VITWTALIS---ALGLNGFAQRALEKFREME 565
+ + + V W +L++ A G A+ +K ++E
Sbjct: 548 EFIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLDIE 590
>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 166/601 (27%), Positives = 298/601 (49%), Gaps = 45/601 (7%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
F+ LL +Y + G +F+ M + ++VT+NS++S + + ++ M LF + R
Sbjct: 95 FLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRL 154
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
+ L + + G + S +L G+ IHGL++ G ++++ NSL++MY +C + A
Sbjct: 155 GLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYA 214
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
+F + D VSWN++I ++ + + L + +M + + N T + +C+
Sbjct: 215 RILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSN 274
Query: 256 QN--SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
N + G +H IK L DV VG+AL+D YAK +L+ A F ++ +KN+V +NA
Sbjct: 275 FNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNA 334
Query: 314 LILGY------ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRM 367
++ G K + ++ L E+ G +P+ FT+S +L++ C+I+
Sbjct: 335 MMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKA----------CIIV-- 382
Query: 368 GYENYEYV--LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
E++++ + +LM K+GL+SD +I+ +Y+ G + +
Sbjct: 383 --EDFKFAKQVHALM---CKNGLLSDEYI-------------GSILIDLYSVLGSMMDAL 424
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
+ + IV +I NG+++ L LF + PD + +++S+C+ +
Sbjct: 425 LCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMG 484
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
L G + G K I S T N I MY K G + ++ F +M + ++++W+ +I
Sbjct: 485 MLRSGEQIQGHATKVGI-SRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMI 543
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
+ +G A AL F M+ G +P+ A + VL AC H GLV EG+ F+ M + Y +
Sbjct: 544 CSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKM 603
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYDTLNST 665
+ + H CVVDLL R G L +AE +I + F ++WR L CRI K DT+ +
Sbjct: 604 KLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSA---CRIHK-DTVTAQ 659
Query: 666 K 666
+
Sbjct: 660 R 660
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 141/582 (24%), Positives = 269/582 (46%), Gaps = 43/582 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
M N+V++NS+IS Y + ++ + +F G + ++T G L+ S N G
Sbjct: 120 MSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAG 179
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +L GL + + +L+ +Y + G +D +F+ + V+WNS+++ + +
Sbjct: 180 KMIHGLILVYGL-GSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQ 238
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD--LEFGEQIHGLVIKNGFDYEL 176
+G E+ + + ++ ++ +A + + S+ + FG +H IK G ++
Sbjct: 239 NGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDV 298
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG-----KALELYL 231
+V +L++MY + + A ++F + ++VV +N ++ L + E KAL L+
Sbjct: 299 VVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFF 358
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
M + P+ T+ ++ +C +++ K +HA + KN L D ++GS L+D Y+
Sbjct: 359 EMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLG 418
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLR 350
++ A LCF+ I N IV A+I GY +++ L ELL +P+EF S ++
Sbjct: 419 SMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMS 478
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
S +L R G E + G T + I R + N
Sbjct: 479 SCANMGML-------RSG----EQIQGH-----------------ATKVGISRFTIFQNS 510
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+Y ++G Q+E PDIVSW+ +I + A +G E L F+ M++ I P+
Sbjct: 511 QIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPN 570
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
++ F+ +L ACS + G ++K + C ++D+ G+ G + + +
Sbjct: 571 HFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLI 630
Query: 531 NEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFLG 568
+ + + W AL+SA ++ AQR +K E+E L
Sbjct: 631 LRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLA 672
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 219/469 (46%), Gaps = 37/469 (7%)
Query: 135 SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
S L +V ++ + L G+ +H +IK F L + N+L+NMY +C S
Sbjct: 53 STFLLESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRS 112
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A+K+F + ++V++N++I + N K + L+ + + ++ T + +C+
Sbjct: 113 ADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQ 172
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
N GK IH ++ L V + ++L+D Y+KC ++ A + F + VSWN+L
Sbjct: 173 SGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSL 232
Query: 315 ILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRS-SLAFQLLQLHCLIIRMGYENY 372
I GY + +++ + Q G N +T L++ S F N
Sbjct: 233 IAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNF---------------NG 277
Query: 373 EYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
+ G+++ +A K GL D VV + +Y +TG ++ +++ Q+
Sbjct: 278 CKMFGTMLHDHAIKLGLHLD-------------VVVGTALLDMYAKTGSLDDAIQIFDQM 324
Query: 432 ERPDIVSWNIVIAACAHNGDYKE-----VLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
++V +N ++A ++ L LF M++ I P +T+ SLL AC + +
Sbjct: 325 VDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVED 384
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
+H L+ K ++ SD ++ ++LID+Y GS+ ++ FN + + ++ TA+I
Sbjct: 385 FKFAKQVHALMCKNGLL-SDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIX 443
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
NG + AL F E+ KPD ++++C + G++R G ++
Sbjct: 444 GYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQI 492
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/391 (36%), Positives = 216/391 (55%), Gaps = 9/391 (2%)
Query: 268 VIKNALECDVFVGSALVDFYAKCDN--LEGAHLCFSEISNKNIVSWNALILGYASKSSPT 325
+++ L D F S +V F A D+ L A L F++I N + N++I GY +K+ P
Sbjct: 1 MLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPR 60
Query: 326 SIFLLIELLQL-GYRPNEFTFSHVLRS-SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSY 383
L +L+ L G P+ FTF + +S + + QLHC ++G+ + Y+ +LM Y
Sbjct: 61 QAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMY 120
Query: 384 AKSG-LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNI 441
+ G L+S F +N ++VV + G Y + +E +KL ++E ++ WNI
Sbjct: 121 SNCGCLVSARKVFDKMVN--KSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNI 178
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I + DY+E L LF M+ + + D T SLL AC+ L L LG LH I+K E
Sbjct: 179 MINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEK-E 237
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
I D + L+DMY KCGSI S++++F EM +++V+TWTALI L + G +ALE F
Sbjct: 238 KIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELF 297
Query: 562 REMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR 621
EM+ KPD + + VL AC H GLV EG+ F M YG++P ++HY C+VD+L R
Sbjct: 298 HEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGR 357
Query: 622 YGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G + EAE +I MP P+ + L C+
Sbjct: 358 AGRIAEAEDLIQNMPMAPDYFVLVGLLSACR 388
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 140/292 (47%), Gaps = 38/292 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+P+ + NSII Y+ A+ + M+ +G +P +FTF L SC L EG
Sbjct: 38 IPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVL--CEGK 95
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK- 118
QL K G F +DA++ L+ +Y GCL VF+ M KS+V+W +++ + +
Sbjct: 96 QLHCHSTKLG-FASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQW 154
Query: 119 --------------------------HGFVEDCMF-----LFCELVRSEVALTESSFVGV 147
+G VED + LF E+ S V + + +
Sbjct: 155 DLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASL 214
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
+ ++ LE G+ +H + K + ++ + +LV+MY +C I SA ++F+++ +DV
Sbjct: 215 LIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDV 274
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC--AGLQN 257
++W +I LA KALEL+ M + V P+ TFV V+ +C AGL N
Sbjct: 275 MTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVN 326
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 116/509 (22%), Positives = 203/509 (39%), Gaps = 102/509 (20%)
Query: 65 VLKNGLFCADAFVGTALLGLYGRH--GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+L+ LF D F + ++ H G L VF +P + T NSI+ +
Sbjct: 1 MLRTCLF-VDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLP 59
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ + ++ + +F + L G+Q+H K GF + + N+L
Sbjct: 60 RQAILFYQLMMLQGLDPDRFTFPSLFKSCGV---LCEGKQLHCHSTKLGFASDAYIQNTL 116
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA------------------------ 218
+NMY C + SA K+F + + VVSW T+IGA A
Sbjct: 117 MNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCW 176
Query: 219 --------ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
E ++ +AL L+ M + V ++ T ++ +C L LGK +H + K
Sbjct: 177 NIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEK 236
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLL 330
+E DV +G+ALVD YAKC ++E A F E+ K++++W ALI+G A L
Sbjct: 237 EKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALEL 296
Query: 331 IELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
+Q+ +P+ TF VL + + +GL+
Sbjct: 297 FHEMQMSEVKPDAITFVGVL-------------------------------AACSHAGLV 325
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
++ +A+ ++ N+ G +P I + ++
Sbjct: 326 NEGIAYFNSMP---------------NKYGI------------QPSIEHYGCMVDMLGRA 358
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
G E +L + M A PD + V LLSAC NL + + + + + T+V
Sbjct: 359 GRIAEAEDLIQNMPMA---PDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYV 415
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
+L ++Y + ++ K+ M +RN+
Sbjct: 416 --LLSNIYSSMKNWEAAKKMRELMVERNI 442
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 156/381 (40%), Gaps = 14/381 (3%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A +F + + N+II +A+ Y M + + P++ TF + SC
Sbjct: 31 ARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGV 90
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
L GK +H K D ++ + L++ Y+ C L A F ++ NK++VSW +
Sbjct: 91 LCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATM 147
Query: 315 ILGYASKSSPTSIFLLIELLQLG---YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYEN 371
I YA P L +++ + N HV S + L L + G +
Sbjct: 148 IGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYE-EALSLFNEMQLSGVKG 206
Query: 372 YEYVLGSLMTSYAKSGLISDAL---AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
+ + SL+ + G + ++ I V + +Y + G +++
Sbjct: 207 DKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVF 266
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
++ D+++W +I A G + LELF M+ + + PD TFV +L+ACS +
Sbjct: 267 QEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVN 326
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISA 547
G + + I ++DM G+ G I + + M + L+SA
Sbjct: 327 EGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSA 386
Query: 548 LGLNG---FAQRALEKFREME 565
++G A+RA ++ E++
Sbjct: 387 CRIHGNLVVAERAAQQLIELD 407
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 222/420 (52%), Gaps = 9/420 (2%)
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ TF +++ +CA LQ G ++ V K DVFV +A V F++ ++ A
Sbjct: 119 PDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLARRL 178
Query: 300 FSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLG--YRPNEFTFSHVLRSSLAFQ 356
F E +++VSWN LI GY P ++ L L++ G RP+E T +
Sbjct: 179 FDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMG 238
Query: 357 LLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L+L H + G ++ ++M Y K G + A + ++ V +I
Sbjct: 239 DLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIV 298
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
G + R G + L ++ D+ WN ++A N KE + LF M+ +++ P+
Sbjct: 299 G-HARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEI 357
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T V+LLSACS+L L +G +H I + ++ S + L+DMY KCG+I ++ IF E
Sbjct: 358 TMVNLLSACSQLGALEMGMWVHHYIDRHQLYLS-VALGTSLVDMYAKCGNIKKAICIFKE 416
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ D+N +TWTA+I L +G A A+E F+ M LG +PD + I VL+AC H GLV+EG
Sbjct: 417 IPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEG 476
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F M+ Y +E +M HY C++DLL R GHL EAE+++ TMP P+A++W C+
Sbjct: 477 RQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACR 536
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/500 (23%), Positives = 227/500 (45%), Gaps = 16/500 (3%)
Query: 118 KHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+H C+ L+ L+ S A + +F ++ + Q +G + G V K GF ++
Sbjct: 97 RHLVDRHCLPLYRALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADV 156
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V N+ V+ + + A ++F + RDVVSWNT+IG S +ALEL+ R+ D
Sbjct: 157 FVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVED 216
Query: 237 --IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
V P++ T + ++ CA + + LGK +H V + C V + +A++D Y KC +LE
Sbjct: 217 GKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLE 276
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSL 353
A F I NK +VSW +I+G+A +L E+ + P + +++
Sbjct: 277 LAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQ 336
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL---AFVTALNIPRAVVPANI 410
+ + L + + E + +L+++ ++ G + + ++ + +V
Sbjct: 337 GKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTS 396
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ +Y + G + + + ++ + ++W +I A++G E +E F+ M + PD
Sbjct: 397 LVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPD 456
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF+ +LSAC + G L+ + + + +ID+ G+ G + + ++
Sbjct: 457 EITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLV 516
Query: 531 NEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
N M D + + W AL A ++G ++A K E++ P + +L
Sbjct: 517 NTMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELD-----PSDSGIYVLLANMYAE 571
Query: 587 GLVREGMELFERMNRSYGVE 606
+R+ + M R GVE
Sbjct: 572 ANMRKKADKVRVMMRHLGVE 591
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 221/497 (44%), Gaps = 80/497 (16%)
Query: 2 PDRNVVSFNSIISAYSRCGY--VEDALRMFLY---MINRGFEPTQFTFGGLL-SCDSLN- 54
P + +N+ A S C + + D + LY + + P TF LL +C L
Sbjct: 77 PPDSASPYNAAFRALSLCPHRHLVDRHCLPLYRALLCSSSARPDHLTFPFLLKACARLQY 136
Query: 55 -PVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
P GA + V K G F AD FV A + + G + +F++ P + +V+WN+++
Sbjct: 137 RPY-GAAVLGHVQKLG-FSADVFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLI 194
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVAL--TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG 171
+ + G + + LF LV A+ E + +G + G + DLE G+++H V G
Sbjct: 195 GGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKG 254
Query: 172 FDYELLVANSLVNMYFQCAGI-----------------WS--------------AEKMFK 200
+ + N++++MY +C + W+ A +F
Sbjct: 255 VRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFD 314
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
++ RDV WN ++ +++ +A+ L+ M V PN+ T V ++++C+ L +
Sbjct: 315 EMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEM 374
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
G +H + ++ L V +G++LVD YAKC N++ A F EI +KN ++W A+I G A+
Sbjct: 375 GMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLAN 434
Query: 321 KS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
+ +I ++ LG +P+E TF VL
Sbjct: 435 HGHADEAIEYFQRMIDLGLQPDEITFIGVL------------------------------ 464
Query: 380 MTSYAKSGLISDALAFVTAL----NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RP 434
++ +GL+ + F + + ++ R + + + + R G +E +L++ + P
Sbjct: 465 -SACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDP 523
Query: 435 DIVSWNIVIAACAHNGD 451
D V W + AC +G+
Sbjct: 524 DAVVWGALFFACRMHGN 540
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 112/217 (51%), Gaps = 5/217 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+R+V +N++++ Y + ++A+ +F M +P + T LLS C L +E G
Sbjct: 316 MPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMG 375
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + ++ L+ + A +GT+L+ +Y + G + + + +F+++P K+ +TW +++
Sbjct: 376 MWVHHYIDRHQLYLSVA-LGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLAN 434
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI-KNGFDYELL 177
HG ++ + F ++ + E +F+GV+ + ++ G Q L+ K + ++
Sbjct: 435 HGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMK 494
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEI-RDVVSWNTI 213
+ ++++ + + AE++ + + D V W +
Sbjct: 495 HYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGAL 531
>gi|125539724|gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indica Group]
Length = 787
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 188/651 (28%), Positives = 305/651 (46%), Gaps = 71/651 (10%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-GA 59
PD VS+ S++SAY+ G AL +FL MI+ G +T L + SL V G
Sbjct: 169 PDS--VSWTSMLSAYTENGCDTQALMLFLEMIHGGVSCDAYTLSVALRAASSLGHVRLGY 226
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
QL ++K+G F F+ L+ YGR L + VF++M K LV+WN ++ + +
Sbjct: 227 QLHCYMIKSG-FVPSEFLENCLIEFYGRCRELQLMQKVFDEMNAKDLVSWNIVIQCYADN 285
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
E+ + F +L+ E + ++H ++ ++G +IHG +I+ G D + V
Sbjct: 286 LCDEEALVHFRDLMYKCAECDEYTLGSILHVITRRCAFDYGREIHGYLIRAGLDSDKYVM 345
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
++L++MY A + + M +R + + ++ G L
Sbjct: 346 SALMDMYVNWATLRKSRSMLP---LRMLKYYLSVQGKL---------------------- 380
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
+Q + SCA + G+ +HA V+K + D FV S+LVD YAKC +LE AH+
Sbjct: 381 -DQFIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPFVISSLVDMYAKCGSLEEAHIL 439
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAF--- 355
FS + V+W+A+I G L +QL + +PNEFT++ VL + +A
Sbjct: 440 FSRTKDPCTVAWSAIISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYTSVLTACMALGDV 499
Query: 356 -QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+++H IR GY + VL SL++
Sbjct: 500 VSGMEIHSNSIRNGYGTSDSVLRSLIS--------------------------------F 527
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y R GQ+N+ ++L L +I SW + A GD+ +L LF ++ + D T
Sbjct: 528 YLREGQFNQALRLCLSLSNSEI-SWGTLFQEFAELGDHLGILNLFHVIQRSGGVLDYPTA 586
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
+LS+C K +L G H + K + SS +C+ LIDMY CGS+ + + F +
Sbjct: 587 CLILSSCGKKAHLPEGLQAHAYLMKRGL-SSTGCMCDYLIDMYSGCGSLTHAFEAFRNTS 645
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
RN +WT++I A NG + A+ F +M P+ ++ ++VL AC GLV E +
Sbjct: 646 GRNSSSWTSIIMASVENGCPETAIRLFVQMLRKEKSPNSLSFLSVLKACAEIGLVNEAFQ 705
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII-TTMPFPPNALIW 644
F M Y ++P +HY ++++L R G KEAE I + +P A W
Sbjct: 706 FFVSMTEVYKIQPSEEHYSHMIEVLGRAGMFKEAEHFIDSVVPSESGASAW 756
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 139/598 (23%), Positives = 255/598 (42%), Gaps = 58/598 (9%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDM-PR-KSLVTWNSIVSIFGKHGFVEDCMFLFCE 131
DA L+ + R G + F+ M PR +SLV W ++S + HG + + L
Sbjct: 35 DAAPQLLLMRAHARAGRMQPARQAFDAMLPRDRSLVAWTVLMSGYATHGPASEALDLLLR 94
Query: 132 LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELLVANSLVNMYFQCA 190
+V + F + + L G Q+H K G+ +L VAN LV MY C
Sbjct: 95 MVEWPLRPDAFVFSVALRACAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYASCR 154
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
+ AEK+F + D VSW +++ A E+ +AL L+L M V + T +
Sbjct: 155 SLGCAEKVFSGIAAPDSVSWTSMLSAYTENGCDTQALMLFLEMIHGGVSCDAYTLSVALR 214
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+ + L + LG +H +IK+ F+ + L++FY +C L+ F E++ K++VS
Sbjct: 215 AASSLGHVRLGYQLHCYMIKSGFVPSEFLENCLIEFYGRCRELQLMQKVFDEMNAKDLVS 274
Query: 311 WNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFS---HVLRSSLAFQL-LQLHCLII 365
WN +I YA ++ +L+ +E+T HV+ AF ++H +I
Sbjct: 275 WNIVIQCYADNLCDEEALVHFRDLMYKCAECDEYTLGSILHVITRRCAFDYGREIHGYLI 334
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALA-------------------FVTALNIPRAVV 406
R G ++ +YV+ +LM Y + + + F+ A ++
Sbjct: 335 RAGLDSDKYVMSALMDMYVNWATLRKSRSMLPLRMLKYYLSVQGKLDQFIVASSLKSCAS 394
Query: 407 PANIIAG------------------------IYNRTGQYNETVKLLSQLERPDIVSWNIV 442
++ AG +Y + G E L S+ + P V+W+ +
Sbjct: 395 DLDLAAGRMLHACVLKFDVNPDPFVISSLVDMYAKCGSLEEAHILFSRTKDPCTVAWSAI 454
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
I+ NG ++ + LF+ M+ + P+ +T+ S+L+AC L ++ G +H +
Sbjct: 455 ISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYTSVLTACMALGDVVSGMEIHSNSIRNGY 514
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
+SD+ V LI Y + G ++++ +++ I+W L G L F
Sbjct: 515 GTSDS-VLRSLISFYLREGQFNQALRLCLSLSNSE-ISWGTLFQEFAELGDHLGILNLFH 572
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
++ G D +L++C + EG++ +Y ++ + C+ D L+
Sbjct: 573 VIQRSGGVLDYPTACLILSSCGKKAHLPEGLQ-----AHAYLMKRGLSSTGCMCDYLI 625
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 124/567 (21%), Positives = 235/567 (41%), Gaps = 75/567 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
M +++VS+N +I Y+ E+AL F ++ + E ++T G +L + G
Sbjct: 267 MNAKDLVSWNIVIQCYADNLCDEEALVHFRDLMYKCAECDEYTLGSILHVITRRCAFDYG 326
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ +++ GL +D +V +AL+ +Y L + S+ +P + L + +S+ GK
Sbjct: 327 REIHGYLIRAGLD-SDKYVMSALMDMYVNWATLRKSRSM---LPLRMLKYY---LSVQGK 379
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
L + + +++ DL G +H V+K + + V
Sbjct: 380 --------------------LDQFIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPFV 419
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+SLV+MY +C + A +F + V+W+ II + F +A+ L+ M ++ V
Sbjct: 420 ISSLVDMYAKCGSLEEAHILFSRTKDPCTVAWSAIISGSCLNGQFERAIHLFRTMQLEHV 479
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA-H 297
PN+ T+ V+ +C L + + G IH+ I+N V +L+ FY + A
Sbjct: 480 QPNEFTYTSVLTACMALGDVVSGMEIHSNSIRNGYGTSDSVLRSLISFYLREGQFNQALR 539
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-----LGYRPNEFTFSHVLRSS 352
LC S +SN I SW L +A I L ++Q L Y S + +
Sbjct: 540 LCLS-LSNSEI-SWGTLFQEFAELGDHLGILNLFHVIQRSGGVLDYPTACLILSSCGKKA 597
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ LQ H +++ G + + L+ Y+ G ++ A
Sbjct: 598 HLPEGLQAHAYLMKRGLSSTGCMCDYLIDMYSGCGSLTHAF------------------E 639
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
N +G+ + SW +I A NG + + LF M P++
Sbjct: 640 AFRNTSGRNSS--------------SWTSIIMASVENGCPETAIRLFVQMLRKEKSPNSL 685
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEI--ISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+F+S+L AC+++ + + + TE+ I + +I++ G+ G +
Sbjct: 686 SFLSVLKACAEIG--LVNEAFQFFVSMTEVYKIQPSEEHYSHMIEVLGRAGMFKEAEHFI 743
Query: 531 NEM--TDRNVITWTALISALGLNGFAQ 555
+ + ++ W+ L SA NG A+
Sbjct: 744 DSVVPSESGASAWSLLCSAAKQNGNAK 770
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 117/249 (46%), Gaps = 4/249 (1%)
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD--IVSWNIVIAAC 446
++ A+ +A +P A P ++ + R G+ + + D +V+W ++++
Sbjct: 21 VAHAVPHRSAETVPDAA-PQLLLMRAHARAGRMQPARQAFDAMLPRDRSLVAWTVLMSGY 79
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
A +G E L+L M + PD + F L AC+ +L +G +H K + +D
Sbjct: 80 ATHGPASEALDLLLRMVEWPLRPDAFVFSVALRACAAAGSLGVGRQVHAAAAKMGYVGAD 139
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
FV N L+ MY C S+G + K+F+ + + ++WT+++SA NG +AL F EM
Sbjct: 140 LFVANGLVTMYASCRSLGCAEKVFSGIAAPDSVSWTSMLSAYTENGCDTQALMLFLEMIH 199
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
G D L L A G VR G +L M +S G P +C+++ R L+
Sbjct: 200 GGVSCDAYTLSVALRAASSLGHVRLGYQLHCYMIKS-GFVPSEFLENCLIEFYGRCRELQ 258
Query: 627 EAEKIITTM 635
+K+ M
Sbjct: 259 LMQKVFDEM 267
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 241/464 (51%), Gaps = 39/464 (8%)
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
SA K+F ++ RDV+SWN++I + K L+L+ +M + + + T V V+ C+
Sbjct: 203 SARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCS 262
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+LG+++H IK + ++ + + L+D Y+K NL A F + +++VSW +
Sbjct: 263 NTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTS 322
Query: 314 LILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMG 368
+I GYA + S S+ L E+ + G P+ FT + +L + LL+ +H I
Sbjct: 323 MIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENK 382
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
++ +V +LM YAK G + DA + +
Sbjct: 383 MQSDLFVSNALMDMYAKCGSMGDAHS--------------------------------VF 410
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
S+++ DIVSWN +I + N E L LF M+ P++ T +L AC+ L L
Sbjct: 411 SEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAALE 469
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G +HG I + S D V N L+DMY KCG++G + +F+ + ++++++WT +I+
Sbjct: 470 RGQEIHGHILRNGF-SLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGY 528
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
G++G+ A+ F EM G +PD V+ I++L AC H GL+ EG F M + +EP+
Sbjct: 529 GMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPK 588
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+HY C+VDLL R G+L +A K I MP P+A IW L GC+
Sbjct: 589 SEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCR 632
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 225/464 (48%), Gaps = 45/464 (9%)
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG 150
++ +F+++ + +++WNS++S + +G E + LF +++ + ++ V V+ G
Sbjct: 201 VESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAG 260
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
SN L G +HG IK F EL + N L++MY + + SA ++F+ + R VVSW
Sbjct: 261 CSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSW 320
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA--GLQNSILGKSIHAKV 268
++I A ++ L+ M + + P+ T ++++CA GL + GK +H +
Sbjct: 321 TSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLEN--GKDVHNYI 378
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
+N ++ D+FV +AL+D YAKC ++ AH FSE+ K+IVSWN +I GY+ S P
Sbjct: 379 KENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEAL 438
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYA 384
L +Q +PN T + +L + + L ++H I+R G+ +V +L+ Y
Sbjct: 439 NLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYL 498
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
K G AL + R L + D+VSW ++IA
Sbjct: 499 KCG----------ALGLARL----------------------LFDMIPEKDLVSWTVMIA 526
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII- 503
+G E + F MR + I PD +F+S+L ACS L G +++ I
Sbjct: 527 GYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIE 586
Query: 504 -SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALI 545
S+ + C ++D+ + G++ + K M + + W AL+
Sbjct: 587 PKSEHYAC--IVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 628
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 254/524 (48%), Gaps = 31/524 (5%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
DR+V+S+NS+IS Y G E L +F M+ G T +++ C + + G
Sbjct: 213 DRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRA 272
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L +K F + + LL +Y + G L+ + VFE M +S+V+W S+++ + + G
Sbjct: 273 LHGYAIKAS-FGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREG 331
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + LF E+ + ++ + ++H + LE G+ +H + +N +L V+N
Sbjct: 332 LSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSN 391
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L++MY +C + A +F +++++D+VSWNT+IG +++ +AL L++ M + P
Sbjct: 392 ALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYN-SKP 450
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N T ++ +CA L G+ IH +++N D V +ALVD Y KC L A L F
Sbjct: 451 NSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLF 510
Query: 301 SEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLA- 354
I K++VSW +I GY +I E+ G P+E +F +L S L
Sbjct: 511 DMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLD 570
Query: 355 -----FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PRAVVPA 408
F +++ +C I E+Y ++ L A++G +S A F+ + I P A +
Sbjct: 571 EGWGFFNMMRNNC-CIEPKSEHYACIVDLL----ARAGNLSKAYKFIKMMPIEPDATIWG 625
Query: 409 NIIAG--IYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC-AHNGDYKEVLELFKYM--R 463
++ G IY+ + + + +LE P+ + +++A A ++EV +L + + R
Sbjct: 626 ALLCGCRIYHDVKLAEKVAEHVFELE-PENTGYYVLLANIYAEAEKWEEVKKLRERIGRR 684
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
R P S + K+ G S H L K E++ T
Sbjct: 685 GLRKNPG----CSWIEIKGKVHIFVTGDSSHPLANKIELLLKKT 724
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/517 (24%), Positives = 235/517 (45%), Gaps = 35/517 (6%)
Query: 162 QIH---GLVIKNGFDYELLVANSLV---NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
QIH L NGF + + + + N+Y CA I ++ + ++ + + +N I
Sbjct: 18 QIHRENSLTYPNGFIFFRPSSKTPLVSSNLYHSCATIGTSVLPSETIDCK-ITDYNIEIC 76
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
E N +A+EL + + T+ V+ CA L++ G+ IH+ + N +E
Sbjct: 77 RFCELGNLRRAMELINQSPKPDL--ELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEV 134
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELL 334
D +GS LV Y C +L F +++N+ + WN L+ GYA + S+ L +
Sbjct: 135 DGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMR 194
Query: 335 QLGYRPNEFT------------------FSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
+LG R E S + + L+ + L L ++ +G +
Sbjct: 195 ELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATM 254
Query: 377 GSLMTSYAKSG--LISDAL-AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
S++ + +G L+ AL + + + + N + +Y+++G N +++ +
Sbjct: 255 VSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGE 314
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
+VSW +IA A G + LF M I PD +T ++L AC+ L G +
Sbjct: 315 RSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDV 374
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H IK+ + + SD FV N L+DMY KCGS+G + +F+EM +++++W +I N
Sbjct: 375 HNYIKENK-MQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSL 433
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
AL F EM++ KP+ + + +L AC + G E+ + R+ G + +
Sbjct: 434 PNEALNLFVEMQY-NSKPNSITMACILPACASLAALERGQEIHGHILRN-GFSLDRHVAN 491
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+VD+ ++ G L A + +P + + W + G
Sbjct: 492 ALVDMYLKCGALGLARLLFDMIP-EKDLVSWTVMIAG 527
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 162/323 (50%), Gaps = 10/323 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M +R+VVS+ S+I+ Y+R G + ++R+F M G P FT +L +C +E
Sbjct: 312 MGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENG 371
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + +K +D FV AL+ +Y + G + + SVF +M K +V+WN+++ + K+
Sbjct: 372 KDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKN 431
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + LF E+ + + ++ ++ LE G++IHG +++NGF + VA
Sbjct: 432 SLPNEALNLFVEM-QYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVA 490
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+LV+MY +C + A +F + +D+VSW +I +A+ + M +
Sbjct: 491 NALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE 550
Query: 240 PNQTTFVYVINSC--AGLQNSILGKSIHAKVIKN--ALECDVFVGSALVDFYAKCDNLEG 295
P++ +F+ ++ +C +GL + G +++N +E + +VD A+ NL
Sbjct: 551 PDEVSFISILYACSHSGLLDEGWG---FFNMMRNNCCIEPKSEHYACIVDLLARAGNLSK 607
Query: 296 AHLCFSEIS-NKNIVSWNALILG 317
A+ + + W AL+ G
Sbjct: 608 AYKFIKMMPIEPDATIWGALLCG 630
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 119/267 (44%), Gaps = 54/267 (20%)
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
I +NI I G+ + +EL ++ + + T+ S+L C+ L ++ G +H
Sbjct: 68 ITDYNIEICRFCELGNLRRAMELIN--QSPKPDLELRTYCSVLQLCADLKSIQDGRRIHS 125
Query: 496 LIKKTEI------------------------------ISSDTFVCNMLIDMYGKCGS--- 522
+I+ ++ + F+ N+L++ Y K G+
Sbjct: 126 IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRE 185
Query: 523 ---------------IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
+ S+ K+F+E+ DR+VI+W ++IS NG +++ L+ F +M L
Sbjct: 186 SLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLL 245
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFE-RMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
G D +++V+ C + G++ G L + S+G E ++ +C++D+ + G+L
Sbjct: 246 GINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLN--NCLLDMYSKSGNLN 303
Query: 627 EAEKIITTMPFPPNALIWRTFLEGCQR 653
A ++ TM + + W + + G R
Sbjct: 304 SAIQVFETMG-ERSVVSWTSMIAGYAR 329
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 191/635 (30%), Positives = 287/635 (45%), Gaps = 76/635 (11%)
Query: 61 LQASVLKNGLFC-ADAFVGTALLGLYGRHGCLDEVVSVFEDMPR--KSLVTWNSIVS--- 114
L A+ L+ L VG ALL Y R G LD +++F + V++NS++S
Sbjct: 85 LHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALC 144
Query: 115 IFGKHGFVEDCMFLFCELVRSEV-ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF- 172
+F + D + R +V + T S + L + G + H +K GF
Sbjct: 145 LFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFL 204
Query: 173 --DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR------DVVSWNTIIGALAESENFG 224
E N+L++MY + + A+ +F+ DVV+WNT+I L +
Sbjct: 205 DEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCA 264
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSAL 283
+A+E+ M V P+ TF + +C+ L+ LG+ +HA V+K+A L + FV SAL
Sbjct: 265 EAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASAL 324
Query: 284 VDFYAKCDNLEGAHLCFSEI--SNKNIVSWNALILGYASKSSPTSIFLLIELL--QLGYR 339
VD YA + + A F + ++ + WNA+I GYA L + + G
Sbjct: 325 VDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCA 384
Query: 340 PNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
P+E T S VL RS +H +++ G +V +LM YA
Sbjct: 385 PSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYA----------- 433
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
R G+ + ++ + ++ D+VSWN +I C G E
Sbjct: 434 ---------------------RLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEA 472
Query: 456 LELFKYMR----------------AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+L M+ A R P+N T ++LL C+ L A G +HG +
Sbjct: 473 FQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVR 532
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+ SD V + L+DMY KCG + +S +F+ + RNVITW LI A G++G A+
Sbjct: 533 -HALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVA 591
Query: 560 KFREMEFLG-FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDL 618
F EM G P+ V IA L AC H GLV G+ELF M R +GV+P D + CVVD+
Sbjct: 592 LFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDV 651
Query: 619 LVRYGHLKEAEKIITTM-PFPPNALIWRTFLEGCQ 652
L R G L EA IIT+M P W + L C+
Sbjct: 652 LGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACR 686
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 209/471 (44%), Gaps = 60/471 (12%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQ 62
+VV++N++IS + G +A+ + M++ G P TF L +C L + G ++
Sbjct: 246 DVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMH 305
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS--LVTWNSIVSIFGKHG 120
A VLK+ A++FV +AL+ +Y + + VF+ +P S L WN+++ + + G
Sbjct: 306 AVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAG 365
Query: 121 FVEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
E+ + LF + + A +E++ GV+ + + E +HG V+K G V
Sbjct: 366 MDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQ 425
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV- 238
N+L++MY + + A ++F ++ RDVVSWNT+I + +A +L M +
Sbjct: 426 NALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPS 485
Query: 239 ---------------FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
PN T + ++ CA L GK IH +++ALE D+ VGSAL
Sbjct: 486 PSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSAL 545
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG--YRPN 341
VD YAKC L + F + +N+++WN LI+ Y L + + G PN
Sbjct: 546 VDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPN 605
Query: 342 EFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
E TF L + + SGL+ L +
Sbjct: 606 EVTFIAAL-------------------------------AACSHSGLVDRGLELFHGMER 634
Query: 402 PRAVVPAN----IIAGIYNRTGQYNETVKLLSQLE--RPDIVSWNIVIAAC 446
V P + + R G+ +E +++ +E + +W+ ++ AC
Sbjct: 635 DHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGAC 685
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 157/609 (25%), Positives = 272/609 (44%), Gaps = 81/609 (13%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTF-GGLLSCDSLNPVEGAQL 61
R+ VS+NS+ISA E AL M+ G + + FT LL+C L +G +L
Sbjct: 131 RDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRL 190
Query: 62 ----QASVLKNGLF--CADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK------SLVTW 109
A LK G + F ALL +Y R G +D+ S+F +VTW
Sbjct: 191 GREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTW 250
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
N+++S+ + G + + + ++V V +F + S + L G ++H +V+K
Sbjct: 251 NTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLK 310
Query: 170 NG-FDYELLVANSLVNMYFQCAGIWSAEKMFKDV--EIRDVVSWNTIIGALAESENFGKA 226
+ VA++LV+MY + SA ++F V R + WN +I A++ +A
Sbjct: 311 DADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEA 370
Query: 227 LELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
LEL+ RM + P++TT V+ +CA + +++H V+K + + FV +AL+D
Sbjct: 371 LELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMD 430
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL--------- 336
YA+ ++ A F+ I +++VSWN LI G + F L+ +QL
Sbjct: 431 MYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSS 490
Query: 337 ------GYR--PNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYA 384
+R PN T +L A ++H +R E+ V +L+ YA
Sbjct: 491 TTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYA 550
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
K G ++ + A +++R L R ++++WN++I
Sbjct: 551 KCGCLAASRA-------------------VFDR-------------LPRRNVITWNVLIM 578
Query: 445 ACAHNGDYKEVLELFKYMRA-ARIYPDNYTFVSLLSACSKLCNLALGSSL-HGLIKKTEI 502
A +G E + LF M A P+ TF++ L+ACS + G L HG+ + +
Sbjct: 579 AYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGV 638
Query: 503 -ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT--DRNVITWTALISALGLNG---FAQR 556
+ D C ++D+ G+ G + + I M ++ V W++L+ A L+ +
Sbjct: 639 KPTPDLHAC--VVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEV 696
Query: 557 ALEKFREME 565
A E+ E+E
Sbjct: 697 AAERLFELE 705
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 161/338 (47%), Gaps = 26/338 (7%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLL-SCDSLNPVEGA 59
P R + +N++I Y++ G E+AL +F M G P++ T G+L +C G
Sbjct: 347 PSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGK 406
Query: 60 Q-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + V+K G+ + FV AL+ +Y R G +D +F + + +V+WN++++
Sbjct: 407 EAMHGYVVKRGM-AGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVV 465
Query: 119 HGFVEDCMFLFCEL-----VRSEVALTES-----------SFVGVIHGLSNEQDLEFGEQ 162
G + L E+ S + TE + + ++ G + G++
Sbjct: 466 QGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKE 525
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
IHG +++ + ++ V ++LV+MY +C + ++ +F + R+V++WN +I A
Sbjct: 526 IHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGL 585
Query: 223 FGKALELYLRMSV-DIVFPNQTTFVYVINSC--AGLQNSILGKSIHAKVIKNALECDVFV 279
+A+ L+ M+ PN+ TF+ + +C +GL + L + H + ++ +
Sbjct: 586 GDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGL-ELFHGMERDHGVKPTPDL 644
Query: 280 GSALVDFYAKCDNLEGAHLCFS--EISNKNIVSWNALI 315
+ +VD + L+ A+ + E + + +W++L+
Sbjct: 645 HACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLL 682
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTF-GGLLSCDSLNPVE- 57
+P RNV+++N +I AY G ++A+ +F M G P + TF L +C V+
Sbjct: 565 LPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDR 624
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM-PRKSLVT-WNSIVSI 115
G +L + ++ + ++ + GR G LDE S+ M P + V+ W+S++
Sbjct: 625 GLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGA 684
Query: 116 FGKHGFVE 123
H VE
Sbjct: 685 CRLHRNVE 692
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 179/617 (29%), Positives = 281/617 (45%), Gaps = 49/617 (7%)
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGR--HGCLDEVVSVFEDMPR--KSLVTW 109
P G L LK+G + A V +L+ Y L VF D+P + + +W
Sbjct: 29 TPRTGEALHGWALKSGA-ASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDVASW 87
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVAL-TESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
NS+++ +H V + E L + SF + G H L
Sbjct: 88 NSLLNPLSRHHPVSALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGAVTHALAC 147
Query: 169 K---NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
K + + V+ +L+NMY + + A+++F + R+ VSW ++ A + +
Sbjct: 148 KLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEE 207
Query: 226 ALELY-LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
A EL+ L + + N+ V+++ + ++G +H V+K+ L V V ++LV
Sbjct: 208 AFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLV 267
Query: 285 DFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEF 343
YAK + ++ A F +N ++W+A+I GYA + + +++ G+ P EF
Sbjct: 268 TMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEF 327
Query: 344 TFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
TF VL + L Q HCL++++G+E YV +L+ YAK G I DA
Sbjct: 328 TFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDA------- 380
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLEL 458
+ G QL + D+V W +I NG+++E L L
Sbjct: 381 -----------------KDG--------FHQLYDVDDVVLWTAMITGHVQNGEHEEALML 415
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYG 518
+ M I P T S+L AC+ L L LG LH I K S V L MY
Sbjct: 416 YSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRF-SLGGSVGTALSTMYS 474
Query: 519 KCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
KCG++ S+ +F M DR+VI+W ++IS +G AL+ F EM+ G PD + I
Sbjct: 475 KCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFIN 534
Query: 579 VLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFP 638
+L+AC H GLV G F M + Y + P +DHY C+VD+L R G LKEA+ I ++
Sbjct: 535 LLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILSRAGQLKEAKDFIDSITID 594
Query: 639 PNALIWRTFLEGCQRCR 655
+WR L C+ R
Sbjct: 595 HGTCLWRIVLGACRSLR 611
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 216/425 (50%), Gaps = 15/425 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLLSCDS--LNPVE 57
M RN VS+ +++S Y+ E+A +F M+ + E +F +LS S L +
Sbjct: 184 MLHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLM 243
Query: 58 GAQLQASVLKNGLFCADAFVG--TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G QL VLK+GL FV +L+ +Y + C+D + VF ++ +TW+++++
Sbjct: 244 GTQLHGLVLKDGLV---GFVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITG 300
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ ++G +F ++ S TE +FVGV++ S+ L G+Q H L++K GF+ +
Sbjct: 301 YAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQ 360
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ V ++LV+MY +C I A+ F + ++ DVV W +I ++ +AL LY RM
Sbjct: 361 VYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMD 420
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ P+ T V+ +CA L LGK +HA+++K VG+AL Y+KC NLE
Sbjct: 421 KQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLE 480
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSL 353
+ + F + +++++SWN++I ++ + + E ++L G P+ TF ++L +
Sbjct: 481 DSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACS 540
Query: 354 AFQLLQLHCLIIRMGYENYEYV-----LGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
L+ R ++Y + ++ +++G + +A F+ ++ I
Sbjct: 541 HMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILSRAGQLKEAKDFIDSITIDHGTCLW 600
Query: 409 NIIAG 413
I+ G
Sbjct: 601 RIVLG 605
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 210/448 (46%), Gaps = 50/448 (11%)
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG--IWSAEKMFKDVE--IRDV 207
S+++ GE +HG +K+G V+NSL+ Y + +A +F D+ +RDV
Sbjct: 25 SSDRTPRTGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDV 84
Query: 208 VSWNTIIGALAESENFGKALELYLRM--SVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
SWN+++ L+ AL + M S + V P+ +F + A + ++ G H
Sbjct: 85 ASWNSLLNPLSRHHPV-SALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGAVTH 143
Query: 266 AKVIKNALEC---DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
A K C +VFV +AL++ Y K + A F + ++N VSW A++ GYA+
Sbjct: 144 ALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGK 203
Query: 323 SPTSIFLLIELL--QLGYRPNEFTFSHVLRS-SLAFQLL---QLHCLIIRMGYENYEYVL 376
F L L+ + NEF + VL + S+ LL QLH L+++ G + V
Sbjct: 204 CSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVE 263
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
SL+T YAK+ + A+ ++ + + N
Sbjct: 264 NSLVTMYAKAECMDAAMR-------------------VFGSSKERNS------------- 291
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
++W+ +I A NG+ +F M ++ P +TFV +L+ACS + L +G H L
Sbjct: 292 ITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCL 351
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQ 555
+ K + +V + L+DMY KCG IG + F+++ D +V+ WTA+I+ NG +
Sbjct: 352 MVKLG-FETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHE 410
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTAC 583
AL + M+ G P + + +VL AC
Sbjct: 411 EALMLYSRMDKQGIIPSYLTVTSVLRAC 438
>gi|302782105|ref|XP_002972826.1| hypothetical protein SELMODRAFT_173139 [Selaginella moellendorffii]
gi|300159427|gb|EFJ26047.1| hypothetical protein SELMODRAFT_173139 [Selaginella moellendorffii]
Length = 624
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 162/624 (25%), Positives = 292/624 (46%), Gaps = 42/624 (6%)
Query: 32 MINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCL 91
M G P +F +LS + +G +L + L +D G A + +YG+ GC+
Sbjct: 1 MQQDGIAPNKFLLVRVLSSGCSSLAQG-KLAHACLSEATSGSDRVAGNAAINMYGKFGCV 59
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
+ VF+ + + ++TW +VS + ++G +F +++ V + +F+ +++
Sbjct: 60 ESAKVVFDRVLERDIITWTLMVSAYAQNGHTRQAFQVFGKMLVEGVVPNKVTFLAILNAC 119
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSW 210
S+ + F +H L+ ++GF + V +SLV+ Y +C + +A +F + + +VV+W
Sbjct: 120 SSSSEAAF---VHRLLFESGFQFTAKVESSLVDAYGKCKNVSAARAVFSSMTDKTNVVTW 176
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
N I ALA S + AL+ + + + + P+ TF IN+ G + K + A +
Sbjct: 177 NAFIRALASSRDASGALQTFRSLLLQGLVPDTVTF---INASQGAKTPPEAKYLEACRQE 233
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFL 329
+ ++ DV +G+ L++ + A F NKNIVSWNA++ Y+ +I L
Sbjct: 234 SGVQLDVALGNTLINMFGGSSQPCEARRVFDATHNKNIVSWNAMLSAYSQNGHFEETIAL 293
Query: 330 LIELLQLG-YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
++ +P++ TF+ VL S + L + G
Sbjct: 294 FKQMASTKTVKPDKLTFASVLSSCANLENL--------------------------REGK 327
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
++ A A L AV A + +Y++ E + S+ D+V+W ++I+A A
Sbjct: 328 LAHAAAVEAGLEF--AVPVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQ 385
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
NG +E + LF M + PD F ++L AC+ NL G + I + + ++
Sbjct: 386 NGRPQEAIALFFRMT---VPPDGVAFATVLGACASSENLEAGRVVRAQIVELGL-DAERA 441
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V N ++D+YGKC I + +IF M R+ ++W +++A G +L FR M+ G
Sbjct: 442 VANAVLDLYGKCAEIVETAEIFGRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEG 501
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
P V+L++ L+ H GLV +G + F + YG+ P + CVVDLL R G
Sbjct: 502 VCPSEVSLVSALSTYSHAGLVEQGCQCFASIASDYGMVPSREQQGCVVDLLGRAGSWIAE 561
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
+ I P + +W+ L C+
Sbjct: 562 DLIRVVAPSTSRSELWKAVLSACR 585
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 148/282 (52%), Gaps = 18/282 (6%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLL-SCDSL-NPVEGA 59
++N+VS+N+++SAYS+ G+ E+ + +F M + + +P + TF +L SC +L N EG
Sbjct: 268 NKNIVSWNAMLSAYSQNGHFEETIALFKQMASTKTVKPDKLTFASVLSSCANLENLREGK 327
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
A+ ++ GL A T L+ +Y + CL+E +F P +V W ++S + ++
Sbjct: 328 LAHAAAVEAGLEFAVPVAAT-LIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQN 386
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ++ + LF R V +F V+ ++ ++LE G + +++ G D E VA
Sbjct: 387 GRPQEAIALF---FRMTVPPDGVAFATVLGACASSENLEAGRVVRAQIVELGLDAERAVA 443
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+++++Y +CA I ++F + RD VSWNT++ A A + + +L + M ++ V
Sbjct: 444 NAVLDLYGKCAEIVETAEIFGRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVC 503
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
P++ + V S L HA +++ +C + S
Sbjct: 504 PSEVSLV-----------SALSTYSHAGLVEQGCQCFASIAS 534
>gi|302819709|ref|XP_002991524.1| hypothetical protein SELMODRAFT_133644 [Selaginella moellendorffii]
gi|300140726|gb|EFJ07446.1| hypothetical protein SELMODRAFT_133644 [Selaginella moellendorffii]
Length = 809
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 183/680 (26%), Positives = 331/680 (48%), Gaps = 36/680 (5%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEGAQLQ 62
RNVV++ +++AY + G+ ++A M G P +FTF L SC + + +
Sbjct: 95 RNVVTWTVMVAAYVQAGHHKEAFCCLRRMQLEGISPNEFTFVNALGSCGCGDDLARGRTL 154
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR--KSLVTWNSIVSIFGKHG 120
+ G ++ V AL+ +Y R G ++E VF + + ++ W S+V+ +G+
Sbjct: 155 HGWISEGDMESNPVVANALVSMYSRCGGVEEAAKVFAGVRSGTRDVIMWTSMVAAYGQCA 214
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F + LF +++ + + + + ++ + L G+ +H + +GF+ +L+V N
Sbjct: 215 FSDAAFRLFQKMLLEGIRPDKITLIAILGACKSSSFLPAGKLVHNFISSSGFELDLVVRN 274
Query: 181 SLVNMYFQCAGIWSAEKMFKD-VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+L++MY C + +A +F V D VSWNT++GAL E G A++ + M ++
Sbjct: 275 ALIDMYGSCRDLKTARDIFGQLVPYEDAVSWNTLLGALIERGQVGVAIQRFQEMQLNGGK 334
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIK--NALECDVFVGSALVDFYAKCDNLEGAH 297
PN T V ++N CA LG++IH + LE D V ++++ Y KC +E A
Sbjct: 335 PNSMTLVLILNLCAKGGLVQLGRAIHCWICDCCGHLE-DELVRASIIRMYGKCGAVEDAQ 393
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F + VSWNAL+ +A + QL G++ +E T + +L + + Q
Sbjct: 394 AVF-RAGEETFVSWNALVAAFADSGMAEKSLRSLHSTQLEGFQADEITLASILNACESPQ 452
Query: 357 LLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL-AFVTALNIPRAVVPANII 411
L+ +H ++ G+E+ + ++++ Y + G + DA AF T + A I
Sbjct: 453 DLKFGRKVHKQVVGSGWESGTVLGTAVISMYGRCGSVEDAFRAFNTVAEKDLVAMNAIIT 512
Query: 412 AGIYNRTGQYNETVKL--LSQLE--RPDIVSWNIVIAACAHNGDYK----EVLELFKYMR 463
A I + ++ E + L + QLE +P ++ V+ AC+ D EVLE+F M+
Sbjct: 513 ACIQHN--EFGEALNLFRMMQLEGMKPSKATFVSVLNACSSPRDANLKGDEVLEIFHRMQ 570
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALG------SSLHGLIKKTEIISSDTFVCNMLIDMY 517
P+ +FV+ L+A S + ++ ++ L + ++ D + + I++Y
Sbjct: 571 LEGFRPNKISFVNFLTAASSNSSGSIISSAQSCKAIQALAVQAQVFRDDV-IKHGFINLY 629
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
K G++ + ++F +++ R+V++W ++I+A N A +ALE F EM+ G PD + +
Sbjct: 630 AKLGNLNQADQVFQDISRRDVVSWNSIIAAYARNATAAQALELFLEMQLQGIPPDGITFV 689
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI-----I 632
++L+AC H G + F M YGV +H C+VDL R G L AE++
Sbjct: 690 SILSACSHSGQAASAVFYFSSMAIDYGVPAGPEHQGCLVDLFSRSGRLSIAEELSESSSG 749
Query: 633 TTMPFPPNALIWRTFLEGCQ 652
L W L GCQ
Sbjct: 750 GGGGGGGGGLQWMMVLGGCQ 769
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 162/609 (26%), Positives = 285/609 (46%), Gaps = 59/609 (9%)
Query: 12 IISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVLKNG 69
+++A+S G +++ R F M+ G + T + + ++ EG +++ + G
Sbjct: 1 MVAAFSHHGQFDESFRTFQSMLQSGVSIDKITLLTVFNACTKAVALEEGRRVRGYSDECG 60
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-KSLVTWNSIVSIFGKHGFVEDCMFL 128
L A V TA++ YG+ LD ++VF+++ +++VTW +V+ + + G ++
Sbjct: 61 L-SAATAVATAIVNFYGKCRELDNAIAVFDEIEEARNVVTWTVMVAAYVQAGHHKEA--- 116
Query: 129 FCELVRSE---VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
FC L R + ++ E +FV + DL G +HG + + + +VAN+LV+M
Sbjct: 117 FCCLRRMQLEGISPNEFTFVNALGSCGCGDDLARGRTLHGWISEGDMESNPVVANALVSM 176
Query: 186 YFQCAGIWSAEKMFKDVE--IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
Y +C G+ A K+F V RDV+ W +++ A + A L+ +M ++ + P++
Sbjct: 177 YSRCGGVEEAAKVFAGVRSGTRDVIMWTSMVAAYGQCAFSDAAFRLFQKMLLEGIRPDKI 236
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE- 302
T + ++ +C GK +H + + E D+ V +AL+D Y C +L+ A F +
Sbjct: 237 TLIAILGACKSSSFLPAGKLVHNFISSSGFELDLVVRNALIDMYGSCRDLKTARDIFGQL 296
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL- 360
+ ++ VSWN L+ + + +QL G +PN T +L L+QL
Sbjct: 297 VPYEDAVSWNTLLGALIERGQVGVAIQRFQEMQLNGGKPNSMTLVLILNLCAKGGLVQLG 356
Query: 361 ---HCLIIR-MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
HC I G+ E V S++ Y K G + DA A
Sbjct: 357 RAIHCWICDCCGHLEDELVRASIIRMYGKCGAVEDAQAVF-------------------- 396
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
R G+ ET VSWN ++AA A +G ++ L + D T S
Sbjct: 397 RAGE--ET-----------FVSWNALVAAFADSGMAEKSLRSLHSTQLEGFQADEITLAS 443
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+L+AC +L G +H + + S T + +I MYG+CGS+ + + FN + ++
Sbjct: 444 ILNACESPQDLKFGRKVHKQVVGSG-WESGTVLGTAVISMYGRCGSVEDAFRAFNTVAEK 502
Query: 537 NVITWTALISA-LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC---RHGGLV-RE 591
+++ A+I+A + N F + AL FR M+ G KP + ++VL AC R L E
Sbjct: 503 DLVAMNAIITACIQHNEFGE-ALNLFRMMQLEGMKPSKATFVSVLNACSSPRDANLKGDE 561
Query: 592 GMELFERMN 600
+E+F RM
Sbjct: 562 VLEIFHRMQ 570
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 124/237 (52%), Gaps = 5/237 (2%)
Query: 415 YNRTGQYNETVKLLSQLERP-DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
Y + + + + + ++E ++V+W +++AA G +KE + M+ I P+ +T
Sbjct: 75 YGKCRELDNAIAVFDEIEEARNVVTWTVMVAAYVQAGHHKEAFCCLRRMQLEGISPNEFT 134
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FV+ L +C +LA G +LHG I + + + S+ V N L+ MY +CG + + K+F +
Sbjct: 135 FVNALGSCGCGDDLARGRTLHGWISEGD-MESNPVVANALVSMYSRCGGVEEAAKVFAGV 193
Query: 534 TD--RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
R+VI WT++++A G F+ A F++M G +PD++ LIA+L AC+ +
Sbjct: 194 RSGTRDVIMWTSMVAAYGQCAFSDAAFRLFQKMLLEGIRPDKITLIAILGACKSSSFLPA 253
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
G +L S G E ++ + ++D+ LK A I + +A+ W T L
Sbjct: 254 G-KLVHNFISSSGFELDLVVRNALIDMYGSCRDLKTARDIFGQLVPYEDAVSWNTLL 309
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 143/298 (47%), Gaps = 48/298 (16%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQ 60
+ VS+N++++A++ G E +LR GF+ + T +L +C+S ++ G +
Sbjct: 400 EETFVSWNALVAAFADSGMAEKSLRSLHSTQLEGFQADEITLASILNACESPQDLKFGRK 459
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ V+ +G + + +GTA++ +YGR G +++ F + K LV N+I++ +H
Sbjct: 460 VHKQVVGSG-WESGTVLGTAVISMYGRCGSVEDAFRAFNTVAEKDLVAMNAIITACIQHN 518
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF-GEQ----------------- 162
+ + LF + + ++++FV V++ S+ +D G++
Sbjct: 519 EFGEALNLFRMMQLEGMKPSKATFVSVLNACSSPRDANLKGDEVLEIFHRMQLEGFRPNK 578
Query: 163 ---------------------------IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
I L ++ + ++ + +N+Y + + A
Sbjct: 579 ISFVNFLTAASSNSSGSIISSAQSCKAIQALAVQAQVFRDDVIKHGFINLYAKLGNLNQA 638
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
+++F+D+ RDVVSWN+II A A + +ALEL+L M + + P+ TFV ++++C+
Sbjct: 639 DQVFQDISRRDVVSWNSIIAAYARNATAAQALELFLEMQLQGIPPDGITFVSILSACS 696
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 106/219 (48%), Gaps = 12/219 (5%)
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
++AA +H+G + E F+ M + + D T +++ +AC+K L G + G +
Sbjct: 1 MVAAFSHHGQFDESFRTFQSMLQSGVSIDKITLLTVFNACTKAVALEEGRRVRGYSDECG 60
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEK 560
+S+ T V +++ YGKC + +++ +F+E+ + RNV+TWT +++A G + A
Sbjct: 61 -LSAATAVATAIVNFYGKCRELDNAIAVFDEIEEARNVVTWTVMVAAYVQAGHHKEAFCC 119
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
R M+ G P+ + L +C G + G L + E +M+ V + LV
Sbjct: 120 LRRMQLEGISPNEFTFVNALGSCGCGDDLARGRTL-----HGWISEGDMESNPVVANALV 174
Query: 621 ----RYGHLKEAEKIITTM-PFPPNALIWRTFLEGCQRC 654
R G ++EA K+ + + ++W + + +C
Sbjct: 175 SMYSRCGGVEEAAKVFAGVRSGTRDVIMWTSMVAAYGQC 213
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 226/416 (54%), Gaps = 14/416 (3%)
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN----LEGAHLCFS 301
++ + +C+ L + K IHA +I+ + CDVF S L+ F + ++ A FS
Sbjct: 21 LFSLETCSDLTHL---KIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFS 77
Query: 302 EISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
+I N N+ +NA+I G++ +P F ++ + G P+ TF +++S +
Sbjct: 78 QIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISM 137
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
Q H II+ G+E YV SL+ YA G A + V ++I G +N
Sbjct: 138 GSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRG-FN 196
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G KL Q+ ++V+W+ +I+ A N + + +ELFK +++ + + VS
Sbjct: 197 KCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVS 256
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
++S+C+ L L LG H + K + + + + L+DMY +CGSI +V +F ++ +R
Sbjct: 257 VISSCAHLGALELGERAHDYVVKNGM-TLNLILGTALVDMYARCGSIDKAVWVFEDLPER 315
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+ ++WTALI+ L ++G+++R+L+ F M G P + AVL+AC HGGLV G ++F
Sbjct: 316 DTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIF 375
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
E M R + VEP ++HY C+VDLL R G L+EAE+ + MP PNA +W L C+
Sbjct: 376 ESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACR 431
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 218/480 (45%), Gaps = 69/480 (14%)
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFC 130
FC D GT+L+ D +F + +L +N+++ + +
Sbjct: 58 FCVDPSSGTSLI---------DYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYV 108
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY---- 186
+ R + +F ++ + + G Q HG +IK+GF+ ++ V NSLV+MY
Sbjct: 109 QSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFG 168
Query: 187 --------FQ-------------------CAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
FQ C + SA K+F + +++V+W+T+I A+
Sbjct: 169 DTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQ 228
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ +F KA+EL+ + V N+T V VI+SCA L LG+ H V+KN + ++ +
Sbjct: 229 NNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLIL 288
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGY 338
G+ALVD YA+C +++ A F ++ ++ +SW ALI G A S S+ +++ G
Sbjct: 289 GTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGL 348
Query: 339 RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV------------LGSLMTSYAKS 386
P + TF+ VL + H ++ G++ +E + G ++ ++
Sbjct: 349 TPRDITFTAVLSAC-------SHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRA 401
Query: 387 GLISDALAFVTALNI-PRAVVPANIIAGIY-NRTGQYNETV-KLLSQLERPDIVSWNIVI 443
G + +A FV + + P A V ++ ++ + E V K+L QL P + +++
Sbjct: 402 GKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQL-LPQHSGYYVLL 460
Query: 444 AACAHNG-DYKEVLELFKYMRAARI-YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+ N ++++V E+ + M+A + P ++ + L K +G S H + K E
Sbjct: 461 SNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHK---FTIGDSSHPEMDKIE 517
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 134/282 (47%), Gaps = 34/282 (12%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQ 62
N+ FN++I +S + A ++ +G P TF L+ SC L+ + G+Q
Sbjct: 83 NLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAH 142
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLD------------EVVS-------------- 96
++K+G F D +V +L+ +Y G + +VVS
Sbjct: 143 GHIIKHG-FEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDV 201
Query: 97 -----VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
+F+ MP K+LVTW++++S + ++ + + LF L V E+ V VI
Sbjct: 202 ESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSC 261
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
++ LE GE+ H V+KNG L++ +LV+MY +C I A +F+D+ RD +SW
Sbjct: 262 AHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWT 321
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
+I LA ++L+ + M + P TF V+++C+
Sbjct: 322 ALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACS 363
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 214/402 (53%), Gaps = 16/402 (3%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKC------DNLEGAHLCFSEISNKNIVSWNALI 315
K IHA+++K L D + A+ F + C D L A + F + WN +I
Sbjct: 60 KQIHARMLKTGLIQDSY---AITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI 116
Query: 316 LGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVLRS----SLAFQLLQLHCLIIRMGYE 370
G++ P LL + + P N +TF +L++ S + Q+H I ++GYE
Sbjct: 117 RGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYE 176
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
N Y + SL+ SYA +G A + P AV ++I G Y + G+ + + L +
Sbjct: 177 NDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKG-YAKAGKMDIALTLFRK 235
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+ + +SW +I+ G +KE L+LF M+ + + PDN + + LSAC++L L G
Sbjct: 236 MVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 295
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+H + KT I C +LIDMY KCG +G ++++F + ++V WTALIS
Sbjct: 296 KWIHSYLTKTRIRMDSVLGC-VLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAY 354
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
+G + A+ KF EM+ +G KP+ + VLTAC + GLV EG +F M R Y ++P ++
Sbjct: 355 HGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIE 414
Query: 611 HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
HY CVVDLL R G L EA++ I MP PNA+IW L+ C+
Sbjct: 415 HYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 456
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 174/423 (41%), Gaps = 63/423 (14%)
Query: 41 QFTFGGLLS--CDSLNP---------VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
Q + G LLS C + P E Q+ A +LK GL D++ T L
Sbjct: 31 QISVGPLLSGSCYCMMPNTETRCSKQEELKQIHARMLKTGLI-QDSYAITKFLSC----- 84
Query: 90 CLDEVVS--------VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTE 141
C+ S VF+ R WN ++ F E + L+ ++
Sbjct: 85 CISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNA 144
Query: 142 SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKD 201
+F ++ SN LE QIH + K G++ ++ NSL+N Y A +F
Sbjct: 145 YTFPSLLKACSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDR 204
Query: 202 VEIRDVVSWNTIIGALAESENFG-------------------------------KALELY 230
+ D VSWN++I A++ +AL+L+
Sbjct: 205 IPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLF 264
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
M V P+ + +++CA L GK IH+ + K + D +G L+D YAKC
Sbjct: 265 HEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKC 324
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL 349
++ A F I K++ +W ALI GYA +I +E+ ++G +PN TF+ VL
Sbjct: 325 GDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVL 384
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYV-----LGSLMTSYAKSGLISDALAFVTALNI-PR 403
+ L++ LI +Y G ++ +++GL+ +A F+ + + P
Sbjct: 385 TACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPN 444
Query: 404 AVV 406
AV+
Sbjct: 445 AVI 447
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M ++N +S+ ++IS Y + G ++AL++F M N EP + LS C L +E
Sbjct: 236 MVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 295
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ S L D+ +G L+ +Y + G + E + VF+++ RKS+ W +++S + H
Sbjct: 296 KWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYH 355
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI 163
G + + F E+ + + +F V+ S +E G+ I
Sbjct: 356 GHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLI 399
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 166/622 (26%), Positives = 297/622 (47%), Gaps = 40/622 (6%)
Query: 37 FEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS 96
F F LL S + + A ++KN + ++F+ L+ +Y G L +
Sbjct: 42 FNQAPSVFSSLLHQFSNTLIHVKSIHAQIIKNWV-STESFLAAKLIRVYSDLGFLGHARN 100
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF+ N++++ F ++ + LF + ++ + + + + ++ D
Sbjct: 101 VFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLD 160
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
E G +I ++ GF L V +S+VN + + A+K+F + +DVV WN+IIG
Sbjct: 161 DEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGG 220
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ F ++++++L M + P+ T ++ +C +G H+ V+ + D
Sbjct: 221 YVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGND 280
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQ 335
VFV ++LVD Y+ + A L F + +++++SWNA+I GY P S L L+Q
Sbjct: 281 VFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQ 340
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
G + T ++R L+ LH IIR E++ + +++ Y+K G I
Sbjct: 341 SGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQ 400
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
A ++ R G+ N +++W ++ + NG
Sbjct: 401 ATI-------------------VFGRMGKKN-------------VITWTAMLVGLSQNGY 428
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
++ L+LF M+ ++ ++ T VSL+ C+ L +L G ++H + + D + +
Sbjct: 429 AEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGY-AFDAVITS 487
Query: 512 MLIDMYGKCGSIGSSVKIFN-EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
LIDMY KCG I S+ K+FN E ++VI ++I G++G + AL + M K
Sbjct: 488 ALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLK 547
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
P++ +++LTAC H GLV EG LF M R + V P+ HY C+VDL R G L+EA++
Sbjct: 548 PNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADE 607
Query: 631 IITTMPFPPNALIWRTFLEGCQ 652
++ MPF P+ + L GC+
Sbjct: 608 LVKQMPFQPSTDVLEALLSGCR 629
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 224/455 (49%), Gaps = 41/455 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--G 58
MP+++VV +NSII Y + G ++++MFL MI G P+ T LL + ++ G
Sbjct: 206 MPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVG 265
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ VL G+ D FV T+L+ +Y G VF+ M +SL++WN+++S + +
Sbjct: 266 MCAHSYVLALGM-GNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQ 324
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + LF LV+S + V +I G S DLE G +H +I+ + L++
Sbjct: 325 NGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVL 384
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ ++V+MY +C I A +F + ++V++W ++ L+++ AL+L+ +M + V
Sbjct: 385 STAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKV 444
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N T V +++ CA L + G+++HA I++ D + SAL+D YAKC + A
Sbjct: 445 AANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEK 504
Query: 299 CF-SEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F +E K+++ N++I+GY ++ + +++ +PN+ TF
Sbjct: 505 LFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFV---------- 554
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN----IIA 412
SL+T+ + SGL+ + A ++ V P + +
Sbjct: 555 ---------------------SLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLV 593
Query: 413 GIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
+++R G+ E +L+ Q+ +P +++ C
Sbjct: 594 DLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGC 628
>gi|296090396|emb|CBI40215.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 163/575 (28%), Positives = 284/575 (49%), Gaps = 57/575 (9%)
Query: 86 GRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFV 145
GR G ++E VF +M ++ +V+WNS+++ + ++G V++ LF V + ++
Sbjct: 50 GRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNI----RTWT 105
Query: 146 GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR 205
++ G + E +E + V ++ + ++ N++++ Y Q + +A K+F ++ +
Sbjct: 106 ILLTGYAKEGRIEEARE----VFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEK 161
Query: 206 DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
+V SWN+++ +A EL+ +M N +++ +I+ + + +
Sbjct: 162 NVASWNSVVTGYCHCYRMSEARELFDQMPER----NSVSWMVMISGYVHISDYWEAWDVF 217
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-NIVSWNALILGYA-SKSS 323
K+ + E + + ++ +A+C L+ A + + + N SW A+I G+ ++ S
Sbjct: 218 VKMCRTRNE---YSWTTMIAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIAGFVQNEES 274
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSL 379
++ LLIEL + G P++ +F+ L + +++ H L I+ G + YV+ L
Sbjct: 275 REALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGL 334
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
++ YAK G + D + +P+ D+VSW
Sbjct: 335 ISMYAKCGNVEDGSHVFRTIRMPKR------------------------------DVVSW 364
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+I+A G + L+LF M A I P+ T SLLSAC L + LG H LI K
Sbjct: 365 TAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFK 424
Query: 500 TEIISSDTF--VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
+ DTF V N LI MY KCG +F EM + ++ITW A++ NG + A
Sbjct: 425 ---LGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEA 480
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
++ F +ME G PD+++ + VL AC H GLV EG F M + YG+ P + HY C+VD
Sbjct: 481 IKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVD 540
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
LL R G+L EAE +I MP P+++IW L C+
Sbjct: 541 LLGRAGYLSEAEALIENMPVKPDSVIWEALLGACR 575
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 143/586 (24%), Positives = 267/586 (45%), Gaps = 87/586 (14%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLN-PVEGAQ 60
P ++ N+ I R G VE+A R+F MI R ++ +++ S N V+ A+
Sbjct: 35 PQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDV----VSWNSMINGYSQNGKVDEAR 90
Query: 61 LQASVLKNGLFCADAFVG------TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
L LF DAFVG T LL Y + G ++E VFE M +++V+WN+++S
Sbjct: 91 L--------LF--DAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMIS 140
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ------IHGLVI 168
+ ++G +++ LF E+ VA S G H + E +Q + +V+
Sbjct: 141 GYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVM 200
Query: 169 KNGF----DY----ELLVA----------NSLVNMYFQCAGIWSAEKMFKDV-EIRDVVS 209
+G+ DY ++ V +++ + QC + A ++++ V E + S
Sbjct: 201 ISGYVHISDYWEAWDVFVKMCRTRNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTNSAS 260
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
W +I ++E +ALEL + + P+ ++F +++CA + + +G+ IH+ I
Sbjct: 261 WAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAI 320
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI--SNKNIVSWNALILGYASKS-SPTS 326
K + + +V + L+ YAKC N+E F I +++VSW A+I Y +
Sbjct: 321 KTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRMPKRDVVSWTAIISAYVQAGHGEVA 380
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTS 382
+ L +++L G +PN+ T + +L + + Q H LI ++G++ + +V SL+T
Sbjct: 381 LDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITM 440
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
Y K G Y + + ++ D+++WN V
Sbjct: 441 YFKCG---------------------------------YEDGFCVFEEMPEHDLITWNAV 467
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
+ CA NG KE +++F+ M I PD +F+ +L ACS + G + + +
Sbjct: 468 LVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYG 527
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISA 547
I + ++D+ G+ G + + + M + + + W AL+ A
Sbjct: 528 IMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGA 573
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 205/455 (45%), Gaps = 47/455 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP++NV S+NS+++ Y C + +A +F M R G +
Sbjct: 158 MPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVF 217
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS-LVTWNSIVSIFGKH 119
++ +N + T ++ + + G LD+ + ++E +P ++ +W ++++ F ++
Sbjct: 218 VKMCRTRN------EYSWTTMIAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIAGFVQN 271
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + L EL RS ++SSF + +N D+E G IH L IK G + V
Sbjct: 272 EESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVM 331
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEI--RDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
N L++MY +C + +F+ + + RDVVSW II A ++ + AL+L+L M
Sbjct: 332 NGLISMYAKCGNVEDGSHVFRTIRMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARG 391
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ PNQ T ++++C L LG+ HA + K + +FVG++L+ Y KC E
Sbjct: 392 IKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKC-GYEDGF 450
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F E+ ++++WNA+++G A + E +++ G P++ +F VL
Sbjct: 451 CVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVL------- 503
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIA 412
+ + +GL+ + A ++ ++P +
Sbjct: 504 ------------------------CACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMV 539
Query: 413 GIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
+ R G +E L+ + +PD V W ++ AC
Sbjct: 540 DLLGRAGYLSEAEALIENMPVKPDSVIWEALLGAC 574
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/376 (18%), Positives = 150/376 (39%), Gaps = 45/376 (11%)
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
I+ + +F + + + +E A F+E+ +++VSWN++I GY+
Sbjct: 31 IQETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEAR 90
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
LL + +G +T L+T YAK G
Sbjct: 91 LLFDAF-VGKNIRTWTI---------------------------------LLTGYAKEGR 116
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
I +A ++ R VV N + Y + G KL ++ ++ SWN V+ H
Sbjct: 117 IEEAREVFESMT-ERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCH 175
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
E ELF M ++ +++ ++S + + + + +T + +
Sbjct: 176 CYRMSEARELFDQMPER----NSVSWMVMISGYVHISDYWEAWDVFVKMCRTR----NEY 227
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFL 567
+I + +CG + +++++ + ++ N +W A+I+ N ++ ALE E+
Sbjct: 228 SWTTMIAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIAGFVQNEESREALELLIELHRS 287
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKE 627
G P + + L+AC + G V G + + G + + ++ + + G++++
Sbjct: 288 GSVPSDSSFTSALSACANIGDVEIG-RVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVED 346
Query: 628 AEKIITTMPFPPNALI 643
+ T+ P ++
Sbjct: 347 GSHVFRTIRMPKRDVV 362
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
LC S+L I++T + F CN I G+ G + + ++FNEM R+V++W +
Sbjct: 18 LCTFRCISTLSLPIQETP--QTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNS 75
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSY 603
+I+ NG A F F+G K R I +LT G + E E+FE M
Sbjct: 76 MINGYSQNGKVDEARLLFD--AFVG-KNIRTWTI-LLTGYAKEGRIEEAREVFESM---- 127
Query: 604 GVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC 654
E + ++ ++ V+ G LK A K+ MP N W + + G C
Sbjct: 128 -TERNVVSWNAMISGYVQNGDLKNARKLFDEMP-EKNVASWNSVVTGYCHC 176
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 170/572 (29%), Positives = 269/572 (47%), Gaps = 71/572 (12%)
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA--GIWSAEKMFKDVEIRDVV 208
L N +L+ +I +I GF + A+ L+ G+ + ++F +E +
Sbjct: 48 LHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGF 107
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
WNT++ A +S + KAL LY M + V P+ T+ V+ +CA GK IH V
Sbjct: 108 MWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHV 167
Query: 269 IKNALECDVFVGSALVDF-------------------------------YAKCDNLEGAH 297
+K + DV+V + L++ Y K ++E A
Sbjct: 168 LKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAK 227
Query: 298 LCFSEISNKNIV-------------------------------SWNALILGYASKSS-PT 325
L F ++ +NIV SW+ALI GY
Sbjct: 228 LIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEE 287
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMT 381
++ + IE+ G R +E VL + +++ +H L+IRMG E+Y + +L+
Sbjct: 288 ALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIH 347
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
Y+ SG I DA + + ++I+G + G + L + DIVSW+
Sbjct: 348 MYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCM-KCGSVEKARALFDVMPEKDIVSWSA 406
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
VI+ A + + E L LF M+ +I PD VS++SAC+ L L G +H I+K
Sbjct: 407 VISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNG 466
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
+ + + L+DMY KCG + +++++FN M ++ V +W ALI L +NG +R+L+ F
Sbjct: 467 L-KVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMF 525
Query: 562 REMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR 621
EM+ G P+ + + VL ACRH GLV EG F M +G+EP + HY C+VDLL R
Sbjct: 526 SEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGR 585
Query: 622 YGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
G L EAEK+I +MP P+ W L C++
Sbjct: 586 AGLLNEAEKLIESMPMAPDVATWGALLGACKK 617
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/540 (23%), Positives = 240/540 (44%), Gaps = 80/540 (14%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQL 61
P + VS+NSI++ Y + G VE+A +F M R
Sbjct: 203 PVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQR-------------------------- 236
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ +++ L G+ G + E +F +M K +V+W++++S + ++G
Sbjct: 237 ------------NIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGM 284
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E+ + +F E+ + + L E V V+ ++ ++ G+ IHGLVI+ G + + + N+
Sbjct: 285 YEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNA 344
Query: 182 LVNMY-------------------------------FQCAGIWSAEKMFKDVEIRDVVSW 210
L++MY +C + A +F + +D+VSW
Sbjct: 345 LIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSW 404
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
+ +I A+ + F + L L+ M + + P++T V VI++C L GK +HA + K
Sbjct: 405 SAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRK 464
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFL 329
N L+ +V +G+ L+D Y KC +E A F+ + K + SWNALI+G A S+ +
Sbjct: 465 NGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDM 524
Query: 330 LIELLQLGYRPNEFTFSHVLRSSLAFQLL-----QLHCLIIRMGYENYEYVLGSLMTSYA 384
E+ G PNE TF VL + L+ +I + G E G ++
Sbjct: 525 FSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLG 584
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL--ERPDIVSWNIV 442
++GL+++A + ++ + V + G + G ++ +L +PD ++++
Sbjct: 585 RAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVL 644
Query: 443 IAAC-AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
++ A GD+++VLE+ M+ + SL+ A + G H I K E
Sbjct: 645 LSNIFASKGDWEDVLEVRGMMKQQGVV--KTPGCSLIEANGVVHEFLAGDKTHPWINKVE 702
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 134/621 (21%), Positives = 264/621 (42%), Gaps = 119/621 (19%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--GAQ 60
+ N +N+++ AY + E AL ++ M+ P +T+ ++ ++ +E G +
Sbjct: 103 NSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKE 162
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ VLK G F +D +V L+ +Y G + + +F++ P V+WNSI++ + K G
Sbjct: 163 IHDHVLKVG-FDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKG 221
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
VE+ +F ++ + + + +N
Sbjct: 222 DVEEAKLIFDQMPQRNI---------------------------------------VASN 242
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
S++ + + + A K+F +++ +D+VSW+ +I ++ + +AL +++ M+ + +
Sbjct: 243 SMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRL 302
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA------------ 288
++ V V+++CA L GK IH VI+ +E V + +AL+ Y+
Sbjct: 303 DEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLF 362
Query: 289 -------------------KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFL 329
KC ++E A F + K+IVSW+A+I GYA +
Sbjct: 363 NGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLA 422
Query: 330 LIELLQLGY-RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
L +QLG RP+E V+ + H + G + Y+ K+GL
Sbjct: 423 LFHEMQLGQIRPDETILVSVISAC-------THLAALDQGKWVHAYI--------RKNGL 467
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
+ + T L+ +Y + G +++ + +E + SWN +I A
Sbjct: 468 KVNVILGTTLLD-------------MYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAV 514
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL-------CNLALGSSLHGLIKKTE 501
NG + L++F M+ + P+ TF+ +L AC + C+ A HG+ +
Sbjct: 515 NGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVK 574
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEK 560
+ C ++D+ G+ G + + K+ M +V TW AL+ A +G +
Sbjct: 575 -----HYGC--MVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERV 627
Query: 561 FREMEFLGFKPDRVALIAVLT 581
R++ + +PD +L+
Sbjct: 628 GRKL--IELQPDHDGFHVLLS 646
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 191/390 (48%), Gaps = 42/390 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M ++++VS++++IS Y + G E+AL MF+ M G + +LS C L+ V+ G
Sbjct: 264 MDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTG 323
Query: 59 AQLQASVLKNGLFCADAFVG--TALLGLY--------------GRH-------------- 88
+ V++ G+ +++V AL+ +Y G H
Sbjct: 324 KMIHGLVIRMGI---ESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGC 380
Query: 89 ---GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFV 145
G +++ ++F+ MP K +V+W++++S + +H + + LF E+ ++ E+ V
Sbjct: 381 MKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILV 440
Query: 146 GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR 205
VI ++ L+ G+ +H + KNG +++ +L++MY +C + +A ++F +E +
Sbjct: 441 SVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEK 500
Query: 206 DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
V SWN +I LA + ++L+++ M + V PN+ TF+ V+ +C + G+
Sbjct: 501 GVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHF 560
Query: 266 AKVI-KNALECDVFVGSALVDFYAKCDNL-EGAHLCFSEISNKNIVSWNALILGYASKSS 323
A +I K+ +E +V +VD + L E L S ++ +W AL LG K
Sbjct: 561 ASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGAL-LGACKKHG 619
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
T + + + +P+ F HVL S++
Sbjct: 620 DTEMGERVGRKLIELQPDHDGF-HVLLSNI 648
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 167/398 (41%), Gaps = 81/398 (20%)
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCD--NLEGAHLCFSEISNKNIVSWNALILGYASK 321
I +++I D F S L+ F L+ + F I N N WN ++ Y
Sbjct: 60 ILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQS 119
Query: 322 SSPTSIFLLIELL-QLGYRPNEFTFSHVLRSS----LAFQLLQLHCLIIRMGYENYEYVL 376
+S LL +L+ + P+ +T+ V+++ L F ++H ++++G+++ YV
Sbjct: 120 NSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQ 179
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
+L+ YA G + DA KL + D
Sbjct: 180 NTLINMYAVCGNMRDAR--------------------------------KLFDESPVLDS 207
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
VSWN ++A GD +E +F M
Sbjct: 208 VSWNSILAGYVKKGDVEEAKLIFDQM---------------------------------- 233
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
+ I++S N +I + GK G + + K+FNEM ++++++W+ALIS NG +
Sbjct: 234 -PQRNIVAS-----NSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEE 287
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
AL F EM G + D V +++VL+AC H +V+ G ++ + G+E ++ + ++
Sbjct: 288 ALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTG-KMIHGLVIRMGIESYVNLQNALI 346
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC 654
+ G + +A+K+ + + W + + GC +C
Sbjct: 347 HMYSGSGEIMDAQKLFNG-SHNLDQISWNSMISGCMKC 383
>gi|302761274|ref|XP_002964059.1| hypothetical protein SELMODRAFT_81625 [Selaginella moellendorffii]
gi|300167788|gb|EFJ34392.1| hypothetical protein SELMODRAFT_81625 [Selaginella moellendorffii]
Length = 474
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 244/470 (51%), Gaps = 35/470 (7%)
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
M+ +C + +A + F V + V+SW +I A A + +ALE + +M + +V PN+ T
Sbjct: 1 MFGKCGDVDAARETFDVVRQKTVISWTALITAYANHGFYDQALENFQKMELKLVAPNEVT 60
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
FV V+N+CA G+ IH V + D+ V +AL++ Y KC LE + F +S
Sbjct: 61 FVAVLNACADSAALRTGRMIHEYV---RCDPDLVVRTALINMYGKCGALEDSERVFYNMS 117
Query: 305 NKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCL 363
++N+VSWN + YA + F L + +QL G +P+ TF +L S + + L+
Sbjct: 118 SRNLVSWNTMFGVYADAKCSSQAFRLYQRIQLEGVKPDGITFMSLLNSFASEEALEA--- 174
Query: 364 IIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
G ++ ++A ++GL D V AN + +Y + G
Sbjct: 175 -------------GKVVHAHAAEAGLEDD-------------VCVANSLLDMYGKCGSLG 208
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
+T L ++E + +SW +I AC G +E L ++ M + PD TF ++L+AC+
Sbjct: 209 DTRLLFEKMELRNFISWTSMITACFKQGKDREALHVYHRMLLEAVVPDRLTFATVLNACA 268
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
L +L G ++HG +++ + + + + L+ MYGK GS+ + F M +R+ W
Sbjct: 269 SLPSLKDGKAVHGCVRERGL-AIELSLGTALVSMYGKGGSLMEAQAAFELMAERDTAAWN 327
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
++++A +G A+ + FR M+ KPD + + VL+ACRH GL+ E +E F M R
Sbjct: 328 SMLAAYAQHGKARGTILAFRRMQQEDVKPDAITYVIVLSACRHAGLLEEALECFTSMTRE 387
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+G+ P +HY ++DL+ R G L+EAEK + P N ++ + L+ C+
Sbjct: 388 HGLLPTSEHYGSLIDLVGRTGRLEEAEKFAGHLKQPSNPMVLTSLLDACR 437
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 131/512 (25%), Positives = 241/512 (47%), Gaps = 49/512 (9%)
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
++G+ G +D F+ + +K++++W ++++ + HGF + + F ++ VA E +
Sbjct: 1 MFGKCGDVDAARETFDVVRQKTVISWTALITAYANHGFYDQALENFQKMELKLVAPNEVT 60
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
FV V++ ++ L G IH V D +L+V +L+NMY +C + +E++F ++
Sbjct: 61 FVAVLNACADSAALRTGRMIHEYV---RCDPDLVVRTALINMYGKCGALEDSERVFYNMS 117
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
R++VSWNT+ G A+++ +A LY R+ ++ V P+ TF+ ++NS A + GK
Sbjct: 118 SRNLVSWNTMFGVYADAKCSSQAFRLYQRIQLEGVKPDGITFMSLLNSFASEEALEAGKV 177
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG-YASKS 322
+HA + LE DV V ++L+D Y KC +L L F ++ +N +SW ++I +
Sbjct: 178 VHAHAAEAGLEDDVCVANSLLDMYGKCGSLGDTRLLFEKMELRNFISWTSMITACFKQGK 237
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTS 382
++ + +L P+ TF+ VL + + L SL
Sbjct: 238 DREALHVYHRMLLEAVVPDRLTFATVLNACAS---------------------LPSLKDG 276
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
A G + + L++ A+V +Y + G E + D +WN +
Sbjct: 277 KAVHGCVRER-GLAIELSLGTALV------SMYGKGGSLMEAQAAFELMAERDTAAWNSM 329
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC--SKLCNLALG-----SSLHG 495
+AA A +G + + F+ M+ + PD T+V +LSAC + L AL + HG
Sbjct: 330 LAAYAQHGKARGTILAFRRMQQEDVKPDAITYVIVLSACRHAGLLEEALECFTSMTREHG 389
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFA 554
L+ +E S LID+ G+ G + + K + N + T+L+ A ++G
Sbjct: 390 LLPTSEHYGS-------LIDLVGRTGRLEEAEKFAGHLKQPSNPMVLTSLLDACRVHGDV 442
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
+RA R +G P+ L++ G
Sbjct: 443 ERATRAARTC--IGLVPEEPPTYVTLSSIYSG 472
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 234/489 (47%), Gaps = 54/489 (11%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQL 61
+ V+S+ ++I+AY+ G+ + AL F M + P + TF +L+ DS G +
Sbjct: 21 KTVISWTALITAYANHGFYDQALENFQKMELKLVAPNEVTFVAVLNACADSAALRTGRMI 80
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V + D V TAL+ +YG+ G L++ VF +M ++LV+WN++ ++
Sbjct: 81 HEYVRCD----PDLVVRTALINMYGKCGALEDSERVFYNMSSRNLVSWNTMFGVYADAKC 136
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
L+ + V +F+ +++ ++E+ LE G+ +H + G + ++ VANS
Sbjct: 137 SSQAFRLYQRIQLEGVKPDGITFMSLLNSFASEEALEAGKVVHAHAAEAGLEDDVCVANS 196
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L++MY +C + +F+ +E+R+ +SW ++I A + +AL +Y RM ++ V P+
Sbjct: 197 LLDMYGKCGSLGDTRLLFEKMELRNFISWTSMITACFKQGKDREALHVYHRMLLEAVVPD 256
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ TF V+N+CA L + GK++H V + L ++ +G+ALV Y K +L A F
Sbjct: 257 RLTFATVLNACASLPSLKDGKAVHGCVRERGLAIELSLGTALVSMYGKGGSLMEAQAAFE 316
Query: 302 EISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
++ ++ +WN+++ YA +I + Q +P+ T+ VL
Sbjct: 317 LMAERDTAAWNSMLAAYAQHGKARGTILAFRRMQQEDVKPDAITYVIVL----------- 365
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG----IYN 416
++ +GL+ +AL T++ ++P + G +
Sbjct: 366 --------------------SACRHAGLLEEALECFTSMTREHGLLPTSEHYGSLIDLVG 405
Query: 417 RTGQYNETVKLLSQLERP-DIVSWNIVIAACAHNGDYKEVLELFKYMRAAR-----IYPD 470
RTG+ E K L++P + + ++ AC +GD + + RAAR + +
Sbjct: 406 RTGRLEEAEKFAGHLKQPSNPMVLTSLLDACRVHGDVE------RATRAARTCIGLVPEE 459
Query: 471 NYTFVSLLS 479
T+V+L S
Sbjct: 460 PPTYVTLSS 468
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 137/277 (49%), Gaps = 14/277 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M RN+VS+N++ Y+ A R++ + G +P TF LL S S +E G
Sbjct: 116 MSSRNLVSWNTMFGVYADAKCSSQAFRLYQRIQLEGVKPDGITFMSLLNSFASEEALEAG 175
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A + GL D V +LL +YG+ G L + +FE M ++ ++W S+++ K
Sbjct: 176 KVVHAHAAEAGLE-DDVCVANSLLDMYGKCGSLGDTRLLFEKMELRNFISWTSMITACFK 234
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + ++ ++ V +F V++ ++ L+ G+ +HG V + G EL +
Sbjct: 235 QGKDREALHVYHRMLLEAVVPDRLTFATVLNACASLPSLKDGKAVHGCVRERGLAIELSL 294
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LV+MY + + A+ F+ + RD +WN+++ A A+ + + RM + V
Sbjct: 295 GTALVSMYGKGGSLMEAQAAFELMAERDTAAWNSMLAAYAQHGKARGTILAFRRMQQEDV 354
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
P+ T+V V+++C HA +++ ALEC
Sbjct: 355 KPDAITYVIVLSACR-----------HAGLLEEALEC 380
>gi|302781981|ref|XP_002972764.1| hypothetical protein SELMODRAFT_173093 [Selaginella moellendorffii]
gi|300159365|gb|EFJ25985.1| hypothetical protein SELMODRAFT_173093 [Selaginella moellendorffii]
Length = 535
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/533 (28%), Positives = 259/533 (48%), Gaps = 46/533 (8%)
Query: 132 LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
L+ + ++ ++ ++ + L G+ +H + + L ++N L+ MY +C
Sbjct: 4 LLHNHASIDIHTYATLLQQCGERRALGDGKALHAHIASRLPNPPLFLSNHLLGMYAKCGS 63
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
A F + R+VVSW TI+ A A + + AL L+ RM + + PN+ TFV V+++
Sbjct: 64 ARDALAAFDSMRDRNVVSWTTIVTAFAHAGHPTAALRLFQRMLAEGIAPNKVTFVAVLHA 123
Query: 252 CAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
C+ + + G+ IH ++ L D V +L + Y KC +++ A E+ ++++
Sbjct: 124 CSDSRELLDPGRMIHRCCEESGLTRDRSVAISLANMYGKCGDVDTAASMLDEMFQPDVIA 183
Query: 311 WNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ----LHCLII 365
W+A+I G+A + + L +Q G N+ T L + L LH LI
Sbjct: 184 WSAVITGFAQQGRSSDALHLFRRMQHEGVIANKITLVATLSACTNSSALADGKFLHSLIA 243
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
E+ V G+L+T Y G + DA LAF
Sbjct: 244 EKKLESDVIVGGALVTMYTNCGSLDDARLAF----------------------------- 274
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA-----RIYPDNYTFVSLLS 479
+ RP++++W +I+AC H G+ E L++F+ + A + D FV L++
Sbjct: 275 ----GAVRRPNVIAWTAMISACVHFGELDEALQIFRLIEAQCLDDRELLLDGIVFVPLIN 330
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
AC++L +L+ G LH I E I D + N L++MY KCGS+ + ++F+ M R+ +
Sbjct: 331 ACARLTDLSQGRRLHARISSDESIKVDVQLGNALVNMYSKCGSVEEAARVFDGMKYRSTV 390
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W +ISA + G + + L F M+ G +PD V+ + VL+AC G V EG + F
Sbjct: 391 SWNTMISAYAVAGHSDKVLWMFHRMQQDGVEPDEVSFVGVLSACNAAGTVEEGCKYFGLC 450
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y + E H+ C++DLL R G+L EAE+++ M P+ + W L+ C+
Sbjct: 451 CEDYRILLEPQHFGCLIDLLGRVGYLDEAERLLRRMT-EPDVMAWMMMLDACR 502
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 131/494 (26%), Positives = 233/494 (47%), Gaps = 44/494 (8%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
F+ LLG+Y + G + ++ F+ M +++V+W +IV+ F G + LF ++
Sbjct: 49 FLSNHLLGMYAKCGSARDALAAFDSMRDRNVVSWTTIVTAFAHAGHPTAALRLFQRMLAE 108
Query: 136 EVALTESSFVGVIHGLSNEQD-LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
+A + +FV V+H S+ ++ L+ G IH ++G + VA SL NMY +C + +
Sbjct: 109 GIAPNKVTFVAVLHACSDSRELLDPGRMIHRCCEESGLTRDRSVAISLANMYGKCGDVDT 168
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A M ++ DV++W+ +I A+ AL L+ RM + V N+ T V +++C
Sbjct: 169 AASMLDEMFQPDVIAWSAVITGFAQQGRSSDALHLFRRMQHEGVIANKITLVATLSACTN 228
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
GK +H+ + + LE DV VG ALV Y C +L+ A L F + N+++W A+
Sbjct: 229 SSALADGKFLHSLIAEKKLESDVIVGGALVTMYTNCGSLDDARLAFGAVRRPNVIAWTAM 288
Query: 315 ILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEY 374
I S+ L E LQ+ F+L++ CL ++ E
Sbjct: 289 I------SACVHFGELDEALQI------------------FRLIEAQCL------DDREL 318
Query: 375 VLGS-----LMTSYAKSGLISDALAFVTAL----NIPRAVVPANIIAGIYNRTGQYNETV 425
+L L+ + A+ +S + +I V N + +Y++ G E
Sbjct: 319 LLDGIVFVPLINACARLTDLSQGRRLHARISSDESIKVDVQLGNALVNMYSKCGSVEEAA 378
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
++ ++ VSWN +I+A A G +VL +F M+ + PD +FV +LSAC+
Sbjct: 379 RVFDGMKYRSTVSWNTMISAYAVAGHSDKVLWMFHRMQQDGVEPDEVSFVGVLSACNAAG 438
Query: 486 NLALGSSLHGLIKKTE--IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
+ G GL + ++ F C LID+ G+ G + + ++ MT+ +V+ W
Sbjct: 439 TVEEGCKYFGLCCEDYRILLEPQHFGC--LIDLLGRVGYLDEAERLLRRMTEPDVMAWMM 496
Query: 544 LISALGLNGFAQRA 557
++ A ++ RA
Sbjct: 497 MLDACRVHNDLTRA 510
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 222/459 (48%), Gaps = 37/459 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SC-DSLNPVEG 58
M DRNVVS+ +I++A++ G+ ALR+F M+ G P + TF +L +C DS ++
Sbjct: 74 MRDRNVVSWTTIVTAFAHAGHPTAALRLFQRMLAEGIAPNKVTFVAVLHACSDSRELLDP 133
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ + D V +L +YG+ G +D S+ ++M + ++ W+++++ F +
Sbjct: 134 GRMIHRCCEESGLTRDRSVAISLANMYGKCGDVDTAASMLDEMFQPDVIAWSAVITGFAQ 193
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G D + LF + V + + V + +N L G+ +H L+ + + +++V
Sbjct: 194 QGRSSDALHLFRRMQHEGVIANKITLVATLSACTNSSALADGKFLHSLIAEKKLESDVIV 253
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LV MY C + A F V +V++W +I A +AL+++ + +
Sbjct: 254 GGALVTMYTNCGSLDDARLAFGAVRRPNVIAWTAMISACVHFGELDEALQIFRLIEAQCL 313
Query: 239 FPNQ-----TTFVYVINSCAGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDN 292
+ FV +IN+CA L + G+ +HA++ + +++ DV +G+ALV+ Y+KC +
Sbjct: 314 DDRELLLDGIVFVPLINACARLTDLSQGRRLHARISSDESIKVDVQLGNALVNMYSKCGS 373
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
+E A F + ++ VSWN +I YA + S +++ + Q G P+E +F VL +
Sbjct: 374 VEEAARVFDGMKYRSTVSWNTMISAYAVAGHSDKVLWMFHRMQQDGVEPDEVSFVGVLSA 433
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
A ++ C + E+Y +L G + D L
Sbjct: 434 CNAAGTVEEGCKYFGLCCEDYRILL-----EPQHFGCLIDLL------------------ 470
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC-AHN 449
R G +E +LL ++ PD+++W +++ AC HN
Sbjct: 471 ----GRVGYLDEAERLLRRMTEPDVMAWMMMLDACRVHN 505
>gi|297798028|ref|XP_002866898.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312734|gb|EFH43157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 742
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 179/654 (27%), Positives = 306/654 (46%), Gaps = 74/654 (11%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
R+V +NSII A+ G +L F M+ G P FT ++S C L + G+ +
Sbjct: 93 RDVFLWNSIIKAHFSNGDYARSLGFFFSMLLSGQSPDHFTAPMVVSACAELLWFDVGSFV 152
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
VLK+G F + VG + + Y + G L + VF++MP + +V W +I+S ++
Sbjct: 153 HGFVLKHGGFERNTAVGASFVYFYSKCGFLQDACLVFDEMPERDVVAWTAIISGHVQNRE 212
Query: 122 VEDCMFLFCEL--VRSEVALTESSFVGV-IHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
E + C++ V S+V + SN L+ G +HG +KNG +V
Sbjct: 213 SERALGYLCKMHTVGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSNVV 272
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+S+ ++Y + A F+++ +D+ SW +II +L S N ++ +++ M +
Sbjct: 273 QSSIFSLYSKSGNPAEAYLSFRELGDQDMFSWTSIIASLVRSGNVEESFDMFWEMQNKGM 332
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ +I+ GK+ H VI++ D V ++L+ Y K + L A
Sbjct: 333 QPDGIVISCLISELGKKMLVPEGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFEFLSVAEK 392
Query: 299 CFSEISNK-NIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F +IS + N +WN ++ GY + + LG
Sbjct: 393 LFCKISEEGNTEAWNTMLKGYGA-------------VLLGK------------------- 420
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
LHC +++ T+L++ +VV N + +Y +
Sbjct: 421 -SLHCYVVK------------------------------TSLDLTISVV--NSLIDLYGK 447
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G ++ + + +IV+WN +IA+ + + + LF M + P + T V+L
Sbjct: 448 MGDLTVAWRMFCEAD-TNIVTWNAMIASYVYCEQPDKAIALFDRMVSENFKPSSITLVTL 506
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L AC+ +L G +H I +TE + + LIDMY KCG + S ++F+ + ++
Sbjct: 507 LMACANTGSLERGQMIHRYIIETE-HEMNLSLSTALIDMYAKCGHLEKSRELFDAASQKD 565
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+ W +IS G++G + A+ F +ME KP +A+L+AC H GLV G LF
Sbjct: 566 AVCWNVMISGYGMHGHVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEHGKNLFL 625
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+M++ Y V+P + HY C+VDLL R G+L+EAE + +MPF P+ +IW T L C
Sbjct: 626 KMHQ-YDVKPNLKHYSCLVDLLSRSGNLQEAETTVMSMPFSPDGVIWGTLLSSC 678
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 149/643 (23%), Positives = 268/643 (41%), Gaps = 114/643 (17%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE---PTQFTFG-GLLSCDSLNPV 56
MP+R+VV++ +IIS + + E AL M G + P T G +C +L +
Sbjct: 192 MPERDVVAWTAIISGHVQNRESERALGYLCKMHTVGSDVDKPNPRTLECGFQACSNLGAL 251
Query: 57 -EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
EG L +KNGL ++ V +++ LY + G E F ++ + + +W SI++
Sbjct: 252 KEGRCLHGFAVKNGLASSNV-VQSSIFSLYSKSGNPAEAYLSFRELGDQDMFSWTSIIAS 310
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ G VE+ +F E+ + +I L + + G+ HG VI++ F +
Sbjct: 311 LVRSGNVEESFDMFWEMQNKGMQPDGIVISCLISELGKKMLVPEGKAFHGFVIRHCFSLD 370
Query: 176 LLVANSLVNMYFQCAGIWSAEKMF-KDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V NSL++MY + + AEK+F K E + +WNT++ + +G L
Sbjct: 371 STVCNSLLSMYCKFEFLSVAEKLFCKISEEGNTEAWNTML------KGYGAVL------- 417
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
LGKS+H V+K +L+ + V ++L+D Y K +L
Sbjct: 418 -------------------------LGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLT 452
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F E ++ NIV+WNA+I Y P +I L ++ ++P+ T +L +
Sbjct: 453 VAWRMFCE-ADTNIVTWNAMIASYVYCEQPDKAIALFDRMVSENFKPSSITLVTLLMACA 511
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L+ +I R E + SL T+ +
Sbjct: 512 NTGSLERGQMIHRYIIETEHEMNLSLSTA----------------------------LID 543
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y + G ++ +L + D V WN++I+ +G + + LF M + + P T
Sbjct: 544 MYAKCGHLEKSRELFDAASQKDAVCWNVMISGYGMHGHVESAIALFDQMEESDVKPTGPT 603
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F++LLSAC+ GL++ + N+ + M+
Sbjct: 604 FLALLSACTHA----------GLVEHGK---------NLFLKMH-------------QYD 631
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
N+ ++ L+ L +G Q A M F PD V +L++C G G+
Sbjct: 632 VKPNLKHYSCLVDLLSRSGNLQEAETTVMSMP---FSPDGVIWGTLLSSCMTHGEFEMGI 688
Query: 594 ELFERMNRSYGVEPEMDHYHCVV-DLLVRYGHLKEAEKIITTM 635
+ +R+ +P+ D Y+ ++ ++ G ++AE+ M
Sbjct: 689 RM---ADRAVASDPQNDGYYIMLANMYSAAGKWEQAERAREMM 728
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 4/200 (2%)
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
+T N V + +I+ Y G+ N + ++ + R D+ WN +I A NGDY
Sbjct: 56 ITGGNSENIFVASKLISS-YASYGKPNLSSRVFDLVTRRDVFLWNSIIKAHFSNGDYARS 114
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
L F M + PD++T ++SAC++L +GS +HG + K +T V +
Sbjct: 115 LGFFFSMLLSGQSPDHFTAPMVVSACAELLWFDVGSFVHGFVLKHGGFERNTAVGASFVY 174
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF---KPD 572
Y KCG + + +F+EM +R+V+ WTA+IS N ++RAL +M +G KP+
Sbjct: 175 FYSKCGFLQDACLVFDEMPERDVVAWTAIISGHVQNRESERALGYLCKMHTVGSDVDKPN 234
Query: 573 RVALIAVLTACRHGGLVREG 592
L AC + G ++EG
Sbjct: 235 PRTLECGFQACSNLGALKEG 254
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 173/662 (26%), Positives = 317/662 (47%), Gaps = 46/662 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MPDR ++N++I AY G AL ++ M G +F LL +C L + G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIVSIFG 117
++L + ++K G + + F+ AL+ +Y ++ L +F+ K V WNSI+S +
Sbjct: 202 SELHSLLVKLG-YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYEL 176
G + + LF E+ + A + V + + G++IH V+K+ EL
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V N+L+ MY +C + AE++ + + DVV+WN++I ++ + +ALE + M
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
++ + +I + L N + G +HA VIK+ + ++ VG+ L+D Y+KC+
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYM 440
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F + +K+++SW +I GYA ++ L ++ + +E +LR+S
Sbjct: 441 GRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVL 500
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ + ++HC I+R G + V N +
Sbjct: 501 KSMLIVKEIHCHILRKGLLD---------------------------------TVIQNEL 527
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y + ++ ++ D+VSW +I++ A NG+ E +ELF+ M + D+
Sbjct: 528 VDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADS 587
Query: 472 YTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ +LSA + L L G +H L++K + V ++DMY CG + S+ +F
Sbjct: 588 VALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA--VVDMYACCGDLQSAKAVF 645
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + + ++ +T++I+A G++G + A+E F +M PD ++ +A+L AC H GL+
Sbjct: 646 DRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLD 705
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
EG + M Y +EP +HY C+VD+L R + EA + + M P A +W L
Sbjct: 706 EGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAA 765
Query: 651 CQ 652
C+
Sbjct: 766 CR 767
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 158/617 (25%), Positives = 301/617 (48%), Gaps = 46/617 (7%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G QL + + K F+ L+ +YG+ G LD+ VF++MP ++ WN+++ +
Sbjct: 98 QGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAY 157
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+G + L+ + V L SSF ++ + +D+ G ++H L++K G+
Sbjct: 158 VSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTG 217
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRMSV 235
+ N+LV+MY + + +A ++F + + D V WN+I+ + + S + LEL+ M +
Sbjct: 218 FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHM 277
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE-CDVFVGSALVDFYAKCDNLE 294
PN T V + +C G + LGK IHA V+K++ +++V +AL+ Y +C +
Sbjct: 278 TGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMP 337
Query: 295 GAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVL---- 349
A +++N ++V+WN+LI GY ++ +++ G++ +E + + ++
Sbjct: 338 QAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASG 397
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
R S ++LH +I+ G+++ V +L+ Y+K L + RA +
Sbjct: 398 RLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL---------TCYMGRAFL--- 445
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
++ D++SW VIA A N + E LELF+ + R+
Sbjct: 446 --------------------RMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 485
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D S+L A S L ++ + +H I + ++ DT + N L+D+YGKC ++G + ++
Sbjct: 486 DEMILGSILRASSVLKSMLIVKEIHCHILRKGLL--DTVIQNELVDVYGKCRNMGYATRV 543
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F + ++V++WT++IS+ LNG A+E FR M G D VAL+ +L+A +
Sbjct: 544 FESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSAL 603
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP----FPPNALIWR 645
+G E+ + R G E VVD+ G L+ A+ + + ++I
Sbjct: 604 NKGREIHCYLLRK-GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINA 662
Query: 646 TFLEGCQRCRIAKYDTL 662
+ GC + + +D +
Sbjct: 663 YGMHGCGKAAVELFDKM 679
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 205/443 (46%), Gaps = 31/443 (6%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL-LVANSLVNMYFQCAGIWSAEKMFKD 201
+F V+ + + G Q+H + K +EL +A LV MY +C + AEK+F +
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILG 261
+ R +WNT+IGA + AL LY M V+ V ++F ++ +CA L++ G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-NIVSWNALILGYA- 319
+H+ ++K F+ +ALV YAK D+L A F K + V WN+++ Y+
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 320 SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
S S ++ L E+ G PN +T L + F +L G E + VL
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL-------GKEIHASVL--- 311
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
KS S L AL +Y R G+ + ++L Q+ D+V+W
Sbjct: 312 -----KSSTHSSELYVCNAL------------IAMYTRCGKMPQAERILRQMNNADVVTW 354
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
N +I N YKE LE F M AA D + S+++A +L NL G LH + K
Sbjct: 355 NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 414
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
S+ V N LIDMY KC + F M D+++I+WT +I+ N ALE
Sbjct: 415 -HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALE 473
Query: 560 KFREMEFLGFKPDRVALIAVLTA 582
FR++ + D + L ++L A
Sbjct: 474 LFRDVAKKRMEIDEMILGSILRA 496
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 177/383 (46%), Gaps = 47/383 (12%)
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN--ALECDVFVGS 281
G E + R+ V F YV+ C + G+ +H+++ K + E D F+
Sbjct: 62 GVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAG 120
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLL-----IELLQL 336
LV Y KC +L+ A F E+ ++ +WN +I Y S P S L +E + L
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180
Query: 337 GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
G +F +L++ + + +LH L++++GY + +++ +L++ YAK+ +S A
Sbjct: 181 GLS----SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAA 236
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
E+ D V WN ++++ + +G
Sbjct: 237 RRLFDGFQ-------------------------------EKGDAVLWNSILSSYSTSGKS 265
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
E LELF+ M P++YT VS L+AC LG +H + K+ SS+ +VCN
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
LI MY +CG + + +I +M + +V+TW +LI N + ALE F +M G K D
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 573 RVALIAVLTACRHGGLVREGMEL 595
V++ +++ A + GMEL
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMEL 408
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 158/508 (31%), Positives = 265/508 (52%), Gaps = 29/508 (5%)
Query: 164 HGLVIKNGF---DYEL--LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
H ++K G +Y L L+ +V+ +F G+ A +F+ + +++ WNT++ LA
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFD--GLPYAVSVFETXQEPNLLIWNTMLRGLA 59
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
S + LE+Y+RM PN TF +++ SCA + G+ IHA+V+K E D +
Sbjct: 60 SSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRY 119
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS---SPTSIFLLIELLQ 335
++L+ YA+ LE A F S +++VS ALI GYAS+ S +F I
Sbjct: 120 AHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERD 179
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG-------- 387
+ N +V + L+L ++R E L S++++ A+SG
Sbjct: 180 V-VSWNAMITGYVENCGYE-EALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREI 237
Query: 388 --LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA 445
L+ D F ++L I A + G+Y++ G L L D+VSWN +I
Sbjct: 238 HTLVDDHHGFGSSLKIVNAFI------GLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGG 291
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI-KKTEIIS 504
H YKE L LF+ M + P++ T +S+L AC+ L + +G +H I K+ + ++
Sbjct: 292 YTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVT 351
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
+ + + LIDMY KCG I ++ ++FN M +++ +W A+I ++G A A + F M
Sbjct: 352 NGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRM 411
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
G +PD + L+ +L+AC H GL+ G +F+ + + Y + P+++HY C++DLL G
Sbjct: 412 RKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGL 471
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEGCQ 652
KEAE+II MP P+ +IW + L+ C+
Sbjct: 472 FKEAEEIIHMMPMEPDGVIWCSLLKACK 499
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 146/560 (26%), Positives = 251/560 (44%), Gaps = 113/560 (20%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SC-DSLNPVEGAQLQ 62
N++ +N+++ + + L M++ M++ G P +TF LL SC S EG Q+
Sbjct: 47 NLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIH 106
Query: 63 ASVLKNGLFCA-DAFVGTALLGLYGRHGCLDE------------VVS------------- 96
A V+K G C D + T+L+ +Y R+G L++ VVS
Sbjct: 107 AQVMKLG--CELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGD 164
Query: 97 ------VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMF-----LFCELVRSEVALTESSFV 145
VF+ + + +V+WN++++ G+VE+C + LF E++R+ V E + V
Sbjct: 165 VRSARKVFDXITERDVVSWNAMIT-----GYVENCGYEEALELFKEMMRTNVRPDEGTLV 219
Query: 146 GVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
V+ + +E G +IH LV +GF L + N+ + +Y +C + A +F+ +
Sbjct: 220 SVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSC 279
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+DVVSWNT+IG + +AL L+ M PN T + V+ +CA L +G+ I
Sbjct: 280 KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWI 339
Query: 265 HAKVIK--NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
H + K + + ++L+D YAKC ++E AH F+ + +K++ SWNA+I G+A
Sbjct: 340 HVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHG 399
Query: 323 SPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMT 381
+ F L + + G P++ T L L++
Sbjct: 400 RANAAFDLFSRMRKNGIEPDDIT-------------------------------LVGLLS 428
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
+ + SGL L++ R + + T YN T P + +
Sbjct: 429 ACSHSGL----------LDLGRHIFKS--------VTQDYNIT---------PKLEHYGC 461
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I H G +KE E+ M + PD + SLL AC NL L S + + E
Sbjct: 462 MIDLLGHAGLFKEAEEIIHMM---PMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIE 518
Query: 502 IISSDTFVCNMLIDMYGKCG 521
+S ++V +L ++Y G
Sbjct: 519 PENSGSYV--LLSNIYATAG 536
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 218/506 (43%), Gaps = 67/506 (13%)
Query: 95 VSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE 154
VSVFE +L+ WN+++ + + ++ +V +F ++ +
Sbjct: 37 VSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKS 96
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQ---------------------CAG-- 191
+ E G QIH V+K G + + SL++MY + C
Sbjct: 97 KTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALI 156
Query: 192 --------IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
+ SA K+F + RDVVSWN +I E+ + +ALEL+ M V P++
Sbjct: 157 TGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEG 216
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T V V+++CA + LG+ IH V + + + +A + Y+KC ++E A F
Sbjct: 217 TLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEG 276
Query: 303 ISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
+S K++VSWN LI GY + ++ L E+L+ G PN+ T VL + H
Sbjct: 277 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC-------AH 329
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
I +G + Y+ L +++ A T+L +Y + G
Sbjct: 330 LGAIDIGRWIHVYIDKRLKG-------VTNGSALRTSL------------IDMYAKCGDI 370
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
++ + + + SWN +I A +G +LF MR I PD+ T V LLSAC
Sbjct: 371 EAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSAC 430
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVIT 540
S L LG + + + I+ +ID+ G G + +I + M + + +
Sbjct: 431 SHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVI 490
Query: 541 WTALISALGLNG-------FAQRALE 559
W +L+ A ++G FAQ+ +E
Sbjct: 491 WCSLLKACKMHGNLELAESFAQKLME 516
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 140/276 (50%), Gaps = 6/276 (2%)
Query: 1 MPDRNVVSFNSIISAY-SRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE- 57
+ +R+VVS+N++I+ Y CGY E+AL +F M+ P + T +LS C +E
Sbjct: 175 ITERDVVSWNAMITGYVENCGY-EEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIEL 233
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ V + F + + A +GLY + G ++ +FE + K +V+WN+++ +
Sbjct: 234 GREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYT 293
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK--NGFDYE 175
++ + LF E++RS + + + + V+ ++ ++ G IH + K G
Sbjct: 294 HMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNG 353
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ SL++MY +C I +A ++F + + + SWN +I A A +L+ RM
Sbjct: 354 SALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRK 413
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
+ + P+ T V ++++C+ LG+ I V ++
Sbjct: 414 NGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQD 449
>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 884
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 173/662 (26%), Positives = 317/662 (47%), Gaps = 46/662 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MPDR ++N++I AY G AL ++ M G +F LL +C L + G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIVSIFG 117
++L + ++K G + + F+ AL+ +Y ++ L +F+ K V WNSI+S +
Sbjct: 202 SELHSLLVKLG-YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYEL 176
G + + LF E+ + A + V + + G++IH V+K+ EL
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V N+L+ MY +C + AE++ + + DVV+WN++I ++ + +ALE + M
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
++ + +I + L N + G +HA VIK+ + ++ VG+ L+D Y+KC+
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYM 440
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F + +K+++SW +I GYA ++ L ++ + +E +LR+S
Sbjct: 441 GRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVL 500
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ + ++HC I+R G + V N +
Sbjct: 501 KSMLIVKEIHCHILRKGLLD---------------------------------TVIQNEL 527
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y + ++ ++ D+VSW +I++ A NG+ E +ELF+ M + D+
Sbjct: 528 VDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADS 587
Query: 472 YTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ +LSA + L L G +H L++K + V ++DMY CG + S+ +F
Sbjct: 588 VALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA--VVDMYACCGDLQSAKAVF 645
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + + ++ +T++I+A G++G + A+E F +M PD ++ +A+L AC H GL+
Sbjct: 646 DRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLD 705
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
EG + M Y +EP +HY C+VD+L R + EA + + M P A +W L
Sbjct: 706 EGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAA 765
Query: 651 CQ 652
C+
Sbjct: 766 CR 767
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 158/617 (25%), Positives = 301/617 (48%), Gaps = 46/617 (7%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G QL + + K F+ L+ +YG+ G LD+ VF++MP ++ WN+++ +
Sbjct: 98 QGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAY 157
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+G + L+ + V L SSF ++ + +D+ G ++H L++K G+
Sbjct: 158 VSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTG 217
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRMSV 235
+ N+LV+MY + + +A ++F + + D V WN+I+ + + S + LEL+ M +
Sbjct: 218 FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHM 277
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE-CDVFVGSALVDFYAKCDNLE 294
PN T V + +C G + LGK IHA V+K++ +++V +AL+ Y +C +
Sbjct: 278 TGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMP 337
Query: 295 GAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVL---- 349
A +++N ++V+WN+LI GY ++ +++ G++ +E + + ++
Sbjct: 338 QAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASG 397
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
R S ++LH +I+ G+++ V +L+ Y+K L + RA +
Sbjct: 398 RLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL---------TCYMGRAFL--- 445
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
++ D++SW VIA A N + E LELF+ + R+
Sbjct: 446 --------------------RMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 485
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D S+L A S L ++ + +H I + ++ DT + N L+D+YGKC ++G + ++
Sbjct: 486 DEMILGSILRASSVLKSMLIVKEIHCHILRKGLL--DTVIQNELVDVYGKCRNMGYATRV 543
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F + ++V++WT++IS+ LNG A+E FR M G D VAL+ +L+A +
Sbjct: 544 FESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSAL 603
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP----FPPNALIWR 645
+G E+ + R G E VVD+ G L+ A+ + + ++I
Sbjct: 604 NKGREIHCYLLRK-GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINA 662
Query: 646 TFLEGCQRCRIAKYDTL 662
+ GC + + +D +
Sbjct: 663 YGMHGCGKAAVELFDKM 679
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 205/443 (46%), Gaps = 31/443 (6%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL-LVANSLVNMYFQCAGIWSAEKMFKD 201
+F V+ + + G Q+H + K +EL +A LV MY +C + AEK+F +
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILG 261
+ R +WNT+IGA + AL LY M V+ V ++F ++ +CA L++ G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-NIVSWNALILGYA- 319
+H+ ++K F+ +ALV YAK D+L A F K + V WN+++ Y+
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 320 SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
S S ++ L E+ G PN +T L + F +L G E + VL
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL-------GKEIHASVL--- 311
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
KS S L AL +Y R G+ + ++L Q+ D+V+W
Sbjct: 312 -----KSSTHSSELYVCNAL------------IAMYTRCGKMPQAERILRQMNNADVVTW 354
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
N +I N YKE LE F M AA D + S+++A +L NL G LH + K
Sbjct: 355 NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 414
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
S+ V N LIDMY KC + F M D+++I+WT +I+ N ALE
Sbjct: 415 -HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALE 473
Query: 560 KFREMEFLGFKPDRVALIAVLTA 582
FR++ + D + L ++L A
Sbjct: 474 LFRDVAKKRMEIDEMILGSILRA 496
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 177/383 (46%), Gaps = 47/383 (12%)
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN--ALECDVFVGS 281
G E + R+ V F YV+ C + G+ +H+++ K + E D F+
Sbjct: 62 GVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAG 120
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLL-----IELLQL 336
LV Y KC +L+ A F E+ ++ +WN +I Y S P S L +E + L
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180
Query: 337 GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
G +F +L++ + + +LH L++++GY + +++ +L++ YAK+ +S A
Sbjct: 181 GLS----SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAA 236
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
E+ D V WN ++++ + +G
Sbjct: 237 RRLFDGFQ-------------------------------EKGDAVLWNSILSSYSTSGKS 265
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
E LELF+ M P++YT VS L+AC LG +H + K+ SS+ +VCN
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
LI MY +CG + + +I +M + +V+TW +LI N + ALE F +M G K D
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 573 RVALIAVLTACRHGGLVREGMEL 595
V++ +++ A + GMEL
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMEL 408
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 161/559 (28%), Positives = 277/559 (49%), Gaps = 48/559 (8%)
Query: 105 SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIH 164
++ WNS ++ G+ + LF ++ ++ + +F V S +L++ + +H
Sbjct: 18 TVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVH 77
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
V+K+ F +L V S+V+MY +C+ + A +F + RDV SWN++I A+
Sbjct: 78 THVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVD 137
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
+ + L+ M ++ + + T + + +S L++ + +SIH+ IK ++ DV V + +
Sbjct: 138 RVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWI 197
Query: 285 DFYAKCDNLEGAHLCFSEISN--KNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPN 341
YAKC A F I K VSWN++I GYA + ++ ++L G+R +
Sbjct: 198 AAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRAD 257
Query: 342 EFTFSHV----LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
T + ++ + F +H I++G ++ V+ +L++ Y+K G I A
Sbjct: 258 LSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFD 317
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL----ERPDIVSWNIVIAACAHNGDYK 453
+ V +IAG Y G +E + L S + E+PD+V+ +++ C G
Sbjct: 318 NMLGKTRVSWTAMIAG-YAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTG--- 373
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
LEL K++ D Y ++ +GL + VCN L
Sbjct: 374 -ALELGKWI-------DTY------------------ATANGL-------KDNLMVCNAL 400
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
ID+Y KCGS+ ++ ++F M ++++++WT LI+ LNG + AL F +M LG KP+
Sbjct: 401 IDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNH 460
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
+ +AVL AC H G + +G E F M + Y + P +DHY C+ DLL R G LKEA + I
Sbjct: 461 ITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQ 520
Query: 634 TMPFPPNALIWRTFLEGCQ 652
MPF P+ IW L C+
Sbjct: 521 NMPFKPDVGIWSVLLSACK 539
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/550 (26%), Positives = 257/550 (46%), Gaps = 37/550 (6%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQA 63
V +NS I+ GY AL +F M G EP TF + +C L ++ +Q+
Sbjct: 18 TVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVH 77
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+ + F AD FV T+++ +Y + L ++F MP++ + +WNS++ F + GFV+
Sbjct: 78 THVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVD 137
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ LFCE+ + + +G+ H + +DL+ E IH IK G D ++ V+N+ +
Sbjct: 138 RVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWI 197
Query: 184 NMYFQCAGIWSAEKMFKDVE--IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
Y +C AE +F ++ ++ VSWN++I A E KA+ + +M +
Sbjct: 198 AAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRAD 257
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+T + +++SC + GK IHA I+ + D+ V + L+ Y+KC ++ A F
Sbjct: 258 LSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFD 317
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQL 360
+ K VSW A+I GYA K L ++ +G +P+ T ++ L+
Sbjct: 318 NMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALE- 376
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
LG + +YA + + D L AL +Y + G
Sbjct: 377 ---------------LGKWIDTYATANGLKDNLMVCNAL------------IDVYAKCGS 409
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+ +L + +VSW +IA CA NG++KE L LF M + P++ TF+++L A
Sbjct: 410 MDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQA 469
Query: 481 CSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-N 537
C+ L G L+ K I+ D + C + D+ G+ G + + + M + +
Sbjct: 470 CNHAGFLEKGWECFNLMTKVYKINPGLDHYSC--MADLLGRKGRLKEAFEFIQNMPFKPD 527
Query: 538 VITWTALISA 547
V W+ L+SA
Sbjct: 528 VGIWSVLLSA 537
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 211/454 (46%), Gaps = 38/454 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGL----LSCDSLNPV 56
MP R+V S+NS+I +++ G+V+ + +F M G T GL LS L +
Sbjct: 115 MPKRDVASWNSMILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKML 174
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR--KSLVTWNSIVS 114
E + + +K G+ D V + Y + G +VF+ + + K+ V+WNS+++
Sbjct: 175 E--SIHSFGIKIGID-TDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIA 231
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ + F +++ S+ + ++ + L G+ IH I+ G D
Sbjct: 232 GYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDS 291
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ V N+L++MY +C I SA +F ++ + VSW +I AE + +A+ L+ M
Sbjct: 292 DIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAME 351
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
P+ T + +++ C LGK I N L+ ++ V +AL+D YAKC +++
Sbjct: 352 AVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMD 411
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F + K++VSW LI G A ++ L ++++LG +PN TF VL++
Sbjct: 412 NARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQAC- 470
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
H + G+E + +LMT K I + + +A
Sbjct: 471 ------NHAGFLEKGWECF-----NLMTKVYK---------------INPGLDHYSCMAD 504
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
+ R G+ E + + + +PD+ W+++++AC
Sbjct: 505 LLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSAC 538
>gi|255594521|ref|XP_002536106.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223520840|gb|EEF26277.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 151/512 (29%), Positives = 252/512 (49%), Gaps = 41/512 (8%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+++ Y + + A +F ++ RD VSW T+I + F A+++++ M D V
Sbjct: 10 NTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMFVAMMKDKVL 69
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P Q T V SCA L +GK IH+ VIK L V V ++L++ YAK + A +
Sbjct: 70 PTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAKAGDSVMAKIV 129
Query: 300 FS-------------------------------EISNKNIVSWNALILGYASKS-SPTSI 327
F ++S +++V+WN++I GY+ ++
Sbjct: 130 FDRMRLRSISSWNIMISLHMHGGRADLALAQFEQMSERDVVTWNSMITGYSQHGFDKEAL 189
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSY 383
L +L+ +P+ FT + +L + + L Q+H IIR ++ V +L++ Y
Sbjct: 190 ELFSRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIRTEFDISGVVQNALISMY 249
Query: 384 AKSGLISDALAFVTALNIPR-AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
AK+G + A + V I V+ + Y + G + L+ D+V+W +
Sbjct: 250 AKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKDSDVVAWTAM 309
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTE 501
I NG + +ELF+ M P+++T ++LS S + +L G +H I+ E
Sbjct: 310 IVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNHGKQIHASAIRSGE 369
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEK 560
+S V N LI MY K GSI + ++FN + +++ ++WT++I ALG +G Q ++E
Sbjct: 370 NLSVS--VGNALITMYAKAGSITDAQQVFNLIQRNKDTVSWTSMIIALGQHGLGQESIEL 427
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
F +M LG KPD + + VL+AC H GLV +G F M + +EP + HY C++DL
Sbjct: 428 FEKMLALGIKPDHITYVGVLSACTHVGLVEQGRGYFNLMTSIHKIEPTLSHYACMIDLFG 487
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G L+EA I MP P+ + W + L C+
Sbjct: 488 RAGLLQEAFSFIENMPIEPDVIAWGSLLSSCK 519
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 146/543 (26%), Positives = 243/543 (44%), Gaps = 103/543 (18%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
F +L Y + G L + SVF+++P + V+W +++ + + G E + +F +++
Sbjct: 7 FSWNTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMFVAMMKD 66
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
+V T+ + V + L+ G++IH VIK G + VANSL+NMY + A
Sbjct: 67 KVLPTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAKAGDSVMA 126
Query: 196 EKMFKDVEIRDVVSWNTIIG----------ALAESENFG--------------------- 224
+ +F + +R + SWN +I ALA+ E
Sbjct: 127 KIVFDRMRLRSISSWNIMISLHMHGGRADLALAQFEQMSERDVVTWNSMITGYSQHGFDK 186
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK----------NAL- 273
+ALEL+ RM D + P++ T ++++CA ++N LGK IH+ +I+ NAL
Sbjct: 187 EALELFSRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIRTEFDISGVVQNALI 246
Query: 274 ----------------------ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
+ +V +AL+D Y K N+ A F + + ++V+W
Sbjct: 247 SMYAKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKDSDVVAW 306
Query: 312 NALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIR 366
A+I+GY L ++ + G RPN FT + +L S L Q+H IR
Sbjct: 307 TAMIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNHGKQIHASAIR 366
Query: 367 MGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
G EN +G +L+T YAK+G I+DA N+I Q N+
Sbjct: 367 SG-ENLSVSVGNALITMYAKAGSITDAQQVF------------NLI--------QRNK-- 403
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
D VSW +I A +G +E +ELF+ M A I PD+ T+V +LSAC+ +
Sbjct: 404 ---------DTVSWTSMIIALGQHGLGQESIELFEKMLALGIKPDHITYVGVLSACTHVG 454
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTAL 544
+ G L+ I +ID++G+ G + + M + +VI W +L
Sbjct: 455 LVEQGRGYFNLMTSIHKIEPTLSHYACMIDLFGRAGLLQEAFSFIENMPIEPDVIAWGSL 514
Query: 545 ISA 547
+S+
Sbjct: 515 LSS 517
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/516 (24%), Positives = 227/516 (43%), Gaps = 99/516 (19%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+PDR+ VS+ ++I Y++ G E A++MF+ M+ PTQFT + SC +L ++ G
Sbjct: 32 IPDRDSVSWTTMIVGYNQMGRFESAIKMFVAMMKDKVLPTQFTVTNVFASCAALGALDIG 91
Query: 59 AQLQASVLKNGLF-CADAFVGTALLGLYGRHGC--------------------------- 90
++ + V+K GL C V +LL +Y + G
Sbjct: 92 KKIHSFVIKLGLSGCVP--VANSLLNMYAKAGDSVMAKIVFDRMRLRSISSWNIMISLHM 149
Query: 91 ----LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
D ++ FE M + +VTWNS+++ + +HGF ++ + LF ++ + +
Sbjct: 150 HGGRADLALAQFEQMSERDVVTWNSMITGYSQHGFDKEALELFSRMLEDSLKPDRFTLAS 209
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG--------------- 191
++ +N ++L G+QIH +I+ FD +V N+L++MY + G
Sbjct: 210 ILSACANIENLNLGKQIHSYIIRTEFDISGVVQNALISMYAKTGGVEIAQSIVEQSGISD 269
Query: 192 ------------------IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
I A +F ++ DVV+W +I ++ A+EL+ M
Sbjct: 270 LNVIAFTALLDGYVKLGNITPARHIFDSLKDSDVVAWTAMIVGYVQNGLNDDAMELFRIM 329
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ + PN T +++ + + + GK IHA I++ V VG+AL+ YAK ++
Sbjct: 330 AKEGPRPNSFTLAAMLSVSSNVASLNHGKQIHASAIRSGENLSVSVGNALITMYAKAGSI 389
Query: 294 EGAHLCFSEIS-NKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
A F+ I NK+ VSW ++I+ SI L ++L LG +P+ T+ VL +
Sbjct: 390 TDAQQVFNLIQRNKDTVSWTSMIIALGQHGLGQESIELFEKMLALGIKPDHITYVGVLSA 449
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L++ GY N LMTS K I L+ +
Sbjct: 450 CTHVGLVEQ-----GRGYFN-------LMTSIHK---IEPTLSHYACM------------ 482
Query: 412 AGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
++ R G E + + PD+++W ++++C
Sbjct: 483 IDLFGRAGLLQEAFSFIENMPIEPDVIAWGSLLSSC 518
Score = 42.7 bits (99), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 43/89 (48%)
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
TF N ++ Y K G++ + +F+E+ DR+ ++WT +I G + A++ F M
Sbjct: 6 TFSWNTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMFVAMMK 65
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMEL 595
P + + V +C G + G ++
Sbjct: 66 DKVLPTQFTVTNVFASCAALGALDIGKKI 94
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 238/456 (52%), Gaps = 30/456 (6%)
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQN 257
+F ++ + ++N +I LA + AL L+ +M V ++ TF V+ +C+ ++
Sbjct: 77 IFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKA 136
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
G+ +HA ++K+ + + FV + L+ YA C + A F + ++IV+WN+++ G
Sbjct: 137 LREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSG 196
Query: 318 YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGY-ENYEYVL 376
Y L E+++L F +L + F + + +++ G N E +
Sbjct: 197 YTKNG------LWDEVVKL--------FRKILELRIEFDDVTMISVLMACGRLANLE--I 240
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
G L+ Y S + T+L +Y + GQ + KL ++++ D+
Sbjct: 241 GELIGEYIVSKGLRRNNTLTTSL------------IDMYAKCGQVDTARKLFDEMDKRDV 288
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
V+W+ +I+ A KE L LF M+ +YP+ T VS+L +C+ L G +H
Sbjct: 289 VAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFY 348
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
IKK ++ + T + LID Y KCG I SV++F EM+ +NV TWTALI L NG +
Sbjct: 349 IKKKKMKLTVT-LGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKM 407
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
ALE F M KP+ V I VL+AC H LV +G LF M R + +EP ++HY C+V
Sbjct: 408 ALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMV 467
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
D+L R G L+EA + I MPFPPNA++WRT L C+
Sbjct: 468 DILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCR 503
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 235/456 (51%), Gaps = 25/456 (5%)
Query: 8 SFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQASV 65
++N +I + ++AL +F M + + +FTF +L +C + + EG Q+ A +
Sbjct: 88 AYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALI 147
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
LK+G F ++ FV L+ +Y G + VF+ MP +S+V WNS++S + K+G ++
Sbjct: 148 LKSG-FKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEV 206
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
+ LF +++ + + + + V+ +LE GE I ++ G + SL++M
Sbjct: 207 VKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDM 266
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C + +A K+F +++ RDVV+W+ +I A+++ +AL L+ M V+PN+ T
Sbjct: 267 YAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTM 326
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
V V+ SCA L GK +H + K ++ V +G+ L+DFYAKC ++ + F E+S
Sbjct: 327 VSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSF 386
Query: 306 KNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQLLQLHCL 363
KN+ +W ALI G A+ ++ +L+ +PN+ TF VL + S A + Q L
Sbjct: 387 KNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHL 446
Query: 364 I--IRMGYENYEYV--LGSLMTSYAKSGLISDALAFVTALNI-PRAVVPANIIAG--IYN 416
+R ++ + G ++ ++G + +A F+ + P AVV ++A +
Sbjct: 447 FNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHK 506
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
++++ +++LE AH+GDY
Sbjct: 507 NIEMAEKSLEHITRLEP-------------AHSGDY 529
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 135/254 (53%), Gaps = 1/254 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEGA 59
MP+R++V++NS++S Y++ G ++ +++F ++ E T L++C L +E
Sbjct: 182 MPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIG 241
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+L + + + + T+L+ +Y + G +D +F++M ++ +V W++++S + +
Sbjct: 242 ELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQA 301
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
++ + LF E+ + V E + V V++ + E G+ +H + K + +
Sbjct: 302 DRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLG 361
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
L++ Y +C I + ++FK++ ++V +W +I LA + ALE + M + V
Sbjct: 362 TQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVK 421
Query: 240 PNQTTFVYVINSCA 253
PN TF+ V+++C+
Sbjct: 422 PNDVTFIGVLSACS 435
>gi|115456767|ref|NP_001051984.1| Os03g0861900 [Oryza sativa Japonica Group]
gi|113550455|dbj|BAF13898.1| Os03g0861900 [Oryza sativa Japonica Group]
Length = 651
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 180/644 (27%), Positives = 302/644 (46%), Gaps = 55/644 (8%)
Query: 16 YSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL----NPVEGAQLQASVLKNGLF 71
++R G + AL +F ++ PT L+C +L + Q+ A + GL
Sbjct: 30 HARSGRHDAALTVFRRVL--AVHPTTAA-ADELACSALLRCCDARLAYQIHAQACRRGLV 86
Query: 72 CADAFVGTALLGLYGRHGC-----LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE--D 124
++ + +LL Y + ++F++M K V++ +++S + G
Sbjct: 87 ASNPVLACSLLAFYAAAASSPTAAIPPACNLFDEMAHKDAVSYTAMISALVRAGAAHWRQ 146
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ L+ ++++ T+ +F ++ ++ + G Q+H +++ G L++ +L++
Sbjct: 147 ALALYPCMLQAGAPPTQHTFAQLLSACASGRLHHQGTQLHAQLLRWGAGLNLVLKTALLH 206
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
MY C + A + DVV W II A S + AL+++ M+ V PN T
Sbjct: 207 MYCNCGNMGYAHTVLHSTPQTDVVLWTAIITGYARSGDLQSALQMFRSMTRAAVLPNAFT 266
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN--LEGAHLCFSE 302
+ +I++C+ + G+ IHA++ K LE D V +ALVD Y+K + L+ H F
Sbjct: 267 YAALISACSSFRALQPGRQIHARLFKFGLEHDTSVCNALVDLYSKSSSRLLDLLH-TFHA 325
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLR---SSLAF-QL 357
+ N+VSW ALI G A FL ++L G PN FT S +L+ SSLAF
Sbjct: 326 VDKPNVVSWTALIAGLACHGRDEEAFLAFSQMRLSGVLPNSFTVSTLLKGSSSSLAFLHA 385
Query: 358 LQLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
++H I++ +E+ + +G SL+ Y + + DA A T + A I +
Sbjct: 386 RKIHGYILKTSFESLDAAVGNSLVDVYVRFARMDDAWAVATTM------------AFIRD 433
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
R Y + L+Q+ G + LE+F M + D ++ S
Sbjct: 434 RF-TYTSLARGLNQM------------------GLQQRTLEMFVRMFHEDVDIDGFSIAS 474
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LS+ + L ++ G LH K + SSD V N LIDMY KC +G + +F +++
Sbjct: 475 FLSSAASLASIETGKQLHSCSVKLGL-SSDISVSNSLIDMYSKCKCMGDARSVFQSISEP 533
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
V++W AL+SAL N + AL F +M +G KPD + +L AC GLV G++ F
Sbjct: 534 KVVSWNALMSALVSNEYYNEALSAFEDMTLVGAKPDGITFSLMLFACNRSGLVDIGIKYF 593
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
M +GV P+ HY +D+L R G L EA I +P P+
Sbjct: 594 NSMGNLFGVLPQRSHYTLFLDMLGRSGRLTEAASTIDVIPIQPD 637
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 223/495 (45%), Gaps = 45/495 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCG--YVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV-- 56
M ++ VS+ ++ISA R G + AL ++ M+ G PTQ TF LLS + +
Sbjct: 121 MAHKDAVSYTAMISALVRAGAAHWRQALALYPCMLQAGAPPTQHTFAQLLSACASGRLHH 180
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G QL A +L+ G + + TALL +Y G + +V P+ +V W +I++ +
Sbjct: 181 QGTQLHAQLLRWGAGL-NLVLKTALLHMYCNCGNMGYAHTVLHSTPQTDVVLWTAIITGY 239
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ G ++ + +F + R+ V ++ +I S+ + L+ G QIH + K G +++
Sbjct: 240 ARSGDLQSALQMFRSMTRAAVLPNAFTYAALISACSSFRALQPGRQIHARLFKFGLEHDT 299
Query: 177 LVANSLVNMYFQCAG-IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V N+LV++Y + + + F V+ +VVSW +I LA +A + +M +
Sbjct: 300 SVCNALVDLYSKSSSRLLDLLHTFHAVDKPNVVSWTALIAGLACHGRDEEAFLAFSQMRL 359
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC-DVFVGSALVDFYAKCDNLE 294
V PN T ++ + + + IH ++K + E D VG++LVD Y + ++
Sbjct: 360 SGVLPNSFTVSTLLKGSSSSLAFLHARKIHGYILKTSFESLDAAVGNSLVDVYVRFARMD 419
Query: 295 GAHLCFSEISN-KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A + ++ ++ ++ +L G ++ + + + + F+ + L S+
Sbjct: 420 DAWAVATTMAFIRDRFTYTSLARGLNQMGLQQRTLEMFVRMFHEDVDIDGFSIASFLSSA 479
Query: 353 LAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ + QLH +++G + V SL+ Y+K + DA R+V
Sbjct: 480 ASLASIETGKQLHSCSVKLGLSSDISVSNSLIDMYSKCKCMGDA----------RSV--- 526
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+ P +VSWN +++A N Y E L F+ M
Sbjct: 527 -------------------FQSISEPKVVSWNALMSALVSNEYYNEALSAFEDMTLVGAK 567
Query: 469 PDNYTFVSLLSACSK 483
PD TF +L AC++
Sbjct: 568 PDGITFSLMLFACNR 582
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 159/370 (42%), Gaps = 63/370 (17%)
Query: 300 FSEISNKNIVSWNALILGYASKSSP---TSIFLLIELLQLGYRPNEFTFSHVLRS----S 352
F E+++K+ VS+ A+I + ++ L +LQ G P + TF+ +L +
Sbjct: 118 FDEMAHKDAVSYTAMISALVRAGAAHWRQALALYPCMLQAGAPPTQHTFAQLLSACASGR 177
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L Q QLH ++R G LN+ V +
Sbjct: 178 LHHQGTQLHAQLLRWG----------------------------AGLNL----VLKTALL 205
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y G +L + D+V W +I A +GD + L++F+ M A + P+ +
Sbjct: 206 HMYCNCGNMGYAHTVLHSTPQTDVVLWTAIITGYARSGDLQSALQMFRSMTRAAVLPNAF 265
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS-IGSSVKIFN 531
T+ +L+SACS L G +H + K + DT VCN L+D+Y K S + + F+
Sbjct: 266 TYAALISACSSFRALQPGRQIHARLFKFGL-EHDTSVCNALVDLYSKSSSRLLDLLHTFH 324
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR------- 584
+ NV++WTALI+ L +G + A F +M G P+ + +L
Sbjct: 325 AVDKPNVVSWTALIAGLACHGRDEEAFLAFSQMRLSGVLPNSFTVSTLLKGSSSSLAFLH 384
Query: 585 ----HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
HG +++ FE ++ + G + +VD+ VR+ + +A + TTM F +
Sbjct: 385 ARKIHGYILKTS---FESLDAAVG--------NSLVDVYVRFARMDDAWAVATTMAFIRD 433
Query: 641 ALIWRTFLEG 650
+ + G
Sbjct: 434 RFTYTSLARG 443
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 159/532 (29%), Positives = 267/532 (50%), Gaps = 55/532 (10%)
Query: 135 SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
S AL S+ +G +HG G+Q+H VIK G L + N ++++Y +C
Sbjct: 76 SSHALKISAKLGFLHG---------GKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFND 126
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL----YLRMSVDIVFPNQTTFVYVIN 250
KMF ++ +++VVSWNT+I + E + L + +M ++++ PN T ++
Sbjct: 127 VCKMFDEMPLKNVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLR 186
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+ L + + + +H ++K+ + + FVGSALVD YAK ++ A F E+S++++V
Sbjct: 187 ASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVL 246
Query: 311 WNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLL----QLHCLII 365
WN ++ YA F + +L++L G + + FTF+ ++ S Q+H LII
Sbjct: 247 WNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLII 306
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
R+ ++ V +L+ Y+K+ I DA R I+
Sbjct: 307 RLSFDLDVLVASALVDMYSKNENIEDA----------RKAFDGMIVK------------- 343
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
+IVSW +I +GD KE + L + M YPD S+LS+C L
Sbjct: 344 ---------NIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPDELALASILSSCGNLS 394
Query: 486 NLALGSSLHGLIKKTEIISSDTF--VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
+ +H + + + F + N L+ Y KCGSIGS+ + F+ + + ++I+WT+
Sbjct: 395 ATSEVVQVHAYVVENGF---EAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTS 451
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSY 603
L+ A +G ++ +E F +M F +PD+VA + VL+AC HGG V EG+ F M Y
Sbjct: 452 LMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVY 511
Query: 604 GVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
+ P+ +HY C++DLL R G L EA ++T+MP P + FL C+ R
Sbjct: 512 QIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFLGACKVHR 563
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 254/526 (48%), Gaps = 56/526 (10%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G QL A V+K G C + +L +Y + ++V +F++MP K++V+WN+++
Sbjct: 92 GKQLHAHVIKLG-NCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLIC--- 147
Query: 118 KHGFVE-DCMF--------LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
G VE +C F F ++V +A + G++ D+ Q+H ++
Sbjct: 148 --GVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFIL 205
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
K+GFD V ++LV+ Y + + A+ F +V RD+V WN ++ A + GKA
Sbjct: 206 KSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFG 265
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
++ M ++ V + TF +INSC L + LGK +H +I+ + + DV V SALVD Y+
Sbjct: 266 VFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYS 325
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSH 347
K +N+E A F + KNIVSW +I+GY ++ LL E++++ P+E +
Sbjct: 326 KNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPDELALAS 385
Query: 348 VLRS----SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
+L S S +++Q+H ++ G+E + + +L+++Y+K G I A
Sbjct: 386 ILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAF---------- 435
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+ S + PDI+SW ++ A A +G KE +E+F+ M
Sbjct: 436 ----------------------QSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKML 473
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ + PD F+ +LSAC+ + G L+ I D+ +ID+ G+ G +
Sbjct: 474 FSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFL 533
Query: 524 GSSVKIFNEM-TDRNVITWTALISALGLN---GFAQRALEKFREME 565
++ + M + T A + A ++ G A+ A EK ME
Sbjct: 534 DEAINLLTSMPVEPRSDTLGAFLGACKVHRNVGLARWASEKLFVME 579
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 237/488 (48%), Gaps = 36/488 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVED---------ALRMFLYMINRGFEPTQFTFGGLLSCD 51
MP +NVVS+N++I CG VE F M+ P T GLL
Sbjct: 134 MPLKNVVSWNTLI-----CGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRAS 188
Query: 52 -SLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
LN V QL +LK+G F ++ FVG+AL+ Y + G +DE S F+++ + LV W
Sbjct: 189 IELNDVGICRQLHCFILKSG-FDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLW 247
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
N +VS + +G V+ F +L+R E V +F +I+ G+Q+HGL+I
Sbjct: 248 NVMVSCYALNG-VQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLII 306
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
+ FD ++LVA++LV+MY + I A K F + ++++VSW T+I + + +A+
Sbjct: 307 RLSFDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMR 366
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
L M +P++ +++SC L + +HA V++N E + + +ALV Y+
Sbjct: 367 LLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYS 426
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSH 347
KC ++ A FS ++ +I+SW +L+ YA S + + ++L RP++ F
Sbjct: 427 KCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLG 486
Query: 348 VLRS---------SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
VL + L + L ++ I E+Y ++ L ++G + +A+ +T+
Sbjct: 487 VLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTCIIDLL----GRAGFLDEAINLLTS 542
Query: 399 LNI-PRAVVPANIIAG--IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
+ + PR+ + ++ G + L +E + +++++ A G + +V
Sbjct: 543 MPVEPRSDTLGAFLGACKVHRNVGLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDV 602
Query: 456 LELFKYMR 463
+ K MR
Sbjct: 603 ARVRKLMR 610
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 221/425 (52%), Gaps = 20/425 (4%)
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ TF +++ +CA LQ G ++ V+ DVFV +A + F A C ++ A
Sbjct: 118 PDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKL 177
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR--------PNEFTFSHVLRS 351
F +++VSWN LI GY + P E L++ +R P+E T V+
Sbjct: 178 FDGSHVRDLVSWNTLIGGYVRRGVPR------EALEMFWRMVGDGAVTPDEVTMIGVVSG 231
Query: 352 SLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
S + L+L H + G ++ +M Y K G + A + ++ V
Sbjct: 232 SAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSW 291
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+I G Y + G ++ K+ ++ D+ WN ++ KE L LF M+ A +
Sbjct: 292 TTMIVG-YAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMV 350
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD+ T V+LLSACS+L L +G +H I + + S N L+DMY KCG+I ++
Sbjct: 351 EPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTN-LVDMYSKCGNIEKAI 409
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
++F E+ ++N +TWTA+IS L +G A A++ F+ M LG +PD + I VL+AC H G
Sbjct: 410 RVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAG 469
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
LV+EG E F M Y +E +M HY C+VDLL R G+L EAE ++ TMP P+A++W
Sbjct: 470 LVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGAL 529
Query: 648 LEGCQ 652
C+
Sbjct: 530 FFACR 534
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/519 (22%), Positives = 237/519 (45%), Gaps = 22/519 (4%)
Query: 102 PRKSLVTWNSIV---SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLE 158
P S +N+ + S+ G V C+ L+C L+RS +F ++ + Q+
Sbjct: 79 PPDSASPYNAALRALSLCTDRGLVTRCLPLYCSLLRSARP-DHLTFPFLLKACARLQERN 137
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+G + G V+ GF ++ V N+ ++ C+ + A K+F +RD+VSWNT+IG
Sbjct: 138 YGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYV 197
Query: 219 ESENFGKALELYLRMSVD-IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
+ALE++ RM D V P++ T + V++ A L++ LG+ +H V + + C V
Sbjct: 198 RRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTV 257
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS---KSSPTSIFLLIELL 334
+ + ++D Y KC +LE A F I K IVSW +I+GYA +F E+
Sbjct: 258 RLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVF--DEMP 315
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL- 393
+ P + ++ + L+L + E + + +L+++ ++ G + +
Sbjct: 316 ERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMW 375
Query: 394 --AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
++ + +V+ + +Y++ G + +++ ++ + ++W +I+ A++G
Sbjct: 376 VHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGH 435
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
++ F+ M + PD TF+ +LSAC + G L+ + +
Sbjct: 436 ADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYS 495
Query: 512 MLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFL 567
++D+ G+ G + + + N M + + + W AL A ++G ++A K E++
Sbjct: 496 CMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHGNITLGEKAAMKLVELD-- 553
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
P + +L +R+ + M R GVE
Sbjct: 554 ---PGDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVE 589
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 219/489 (44%), Gaps = 68/489 (13%)
Query: 2 PDRNVVSFNSIISAYSRC---GYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE 57
P + +N+ + A S C G V L ++ ++ R P TF LL +C L
Sbjct: 79 PPDSASPYNAALRALSLCTDRGLVTRCLPLYCSLL-RSARPDHLTFPFLLKACARLQERN 137
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G + +VL G F AD FV A + + E +F+ + LV+WN+++ +
Sbjct: 138 YGNAVLGNVLSLG-FHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGY 196
Query: 117 GKHGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ G + + +F +V V E + +GV+ G + +DLE G ++HG V +G
Sbjct: 197 VRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCT 256
Query: 176 LLVANSLVNMYFQCAGI-----------------WS--------------AEKMFKDVEI 204
+ + N +++MY +C + W+ A K+F ++
Sbjct: 257 VRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPE 316
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
RDV WN ++ + + +AL L+ M +V P+ T V ++++C+ L +G +
Sbjct: 317 RDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWV 376
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-S 323
H + + + V +G+ LVD Y+KC N+E A F EI KN ++W A+I G A+ +
Sbjct: 377 HHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHA 436
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSY 383
+I +++LG +P+E TF VL + H +++ G E + SLM
Sbjct: 437 DVAIKYFQRMIELGLQPDEITFIGVLSAC-------CHAGLVKEGQEFF-----SLM--- 481
Query: 384 AKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIV 442
V+ ++ R + + + + R G +E L++ + PD V W +
Sbjct: 482 ------------VSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGAL 529
Query: 443 IAACAHNGD 451
AC +G+
Sbjct: 530 FFACRMHGN 538
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 106/216 (49%), Gaps = 3/216 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP+R+V +N++++ Y +C ++ALR+F M EP T LLS C L +E
Sbjct: 314 MPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMG 373
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ +GT L+ +Y + G +++ + VF+++P K+ +TW +++S H
Sbjct: 374 MWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANH 433
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI-KNGFDYELLV 178
G + + F ++ + E +F+GV+ + ++ G++ L++ K + ++
Sbjct: 434 GHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKH 493
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTI 213
+ +V++ + + AE + + + D V W +
Sbjct: 494 YSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGAL 529
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
+P++N +++ ++IS + G+ + A++ F MI G +P + TF G+LS C + EG
Sbjct: 415 IPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEG 474
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
+ + ++ + ++ L GR G LDE + MP V W ++
Sbjct: 475 QEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACR 534
Query: 118 KHG 120
HG
Sbjct: 535 MHG 537
>gi|57899214|dbj|BAD87363.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222619954|gb|EEE56086.1| hypothetical protein OsJ_04925 [Oryza sativa Japonica Group]
Length = 566
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 161/502 (32%), Positives = 248/502 (49%), Gaps = 44/502 (8%)
Query: 160 GEQIHGLVIKNGFDYELLVANS-LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+Q H K GF AN+ L+ Y + + A+ +F + +R V+WNT+I A
Sbjct: 30 ADQCHAAATKLGFSASNPFANTALLAFYCRSRRLREAQHLFDQMPLRTAVTWNTLIYGHA 89
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+S A+ + RM V P ++ V+ +C L+N+ G +H+ ++ V
Sbjct: 90 QSTAPDLAVAAFARMVRAGVSPTASSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVV 149
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLG 337
VG+ALVD YAKC L A F E+ KN+ ++ AL+ G+ P LL+ E+ + G
Sbjct: 150 VGTALVDMYAKCRRLGAAQQVFGEMEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSG 209
Query: 338 YRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
PN T+S +L S + + + Q+HC +++ G E+ +VL +L+T Y+K G+
Sbjct: 210 VAPNLMTYSSLLSSFASPEDIDHGKQVHCAVLKKGLEHDPFVLSALVTMYSKCGI----- 264
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
+ + VK+ + D VS+N VI+ + G K
Sbjct: 265 ---------------------------WEDFVKVQMSVSCQDQVSFNSVISGLSCLGRGK 297
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV--CN 511
E + F MR D +TF S+L A +L G +H LI K I D+ V N
Sbjct: 298 EAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSLLEGRQVHTLILK---IGYDSVVDVQN 354
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
LI MY + G+IG S +F M N+++W +L+S +G + +E F +M L +P
Sbjct: 355 SLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHVQP 414
Query: 572 DRVALIAVLTACRHGGLVREGMELFERM-NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
D + ++VLTAC H GLV +G+E F M ++ Y V HY C+VDLL R G+L EAE
Sbjct: 415 DHITFLSVLTACSHVGLVDKGLEYFNLMKDKGYLVGARTKHYACMVDLLGRAGYLNEAEY 474
Query: 631 IITTMPFPPNALIWRTFLEGCQ 652
+I MP P A ++R L CQ
Sbjct: 475 LINGMPIKPGASVYRALLSACQ 496
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/530 (27%), Positives = 258/530 (48%), Gaps = 44/530 (8%)
Query: 35 RGF-----EPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
RGF T F LL+ P Q A+ K G ++ F TALL Y R
Sbjct: 2 RGFLRHAESRTPRAFVQLLAAQPPRPSAADQCHAAATKLGFSASNPFANTALLAFYCRSR 61
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH 149
L E +F+ MP ++ VTWN+++ + + + F +VR+ V+ T SS V+
Sbjct: 62 RLREAQHLFDQMPLRTAVTWNTLIYGHAQSTAPDLAVAAFARMVRAGVSPTASSVSSVLV 121
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
++ G +H + ++ GF ++V +LV+MY +C + +A+++F ++E ++V +
Sbjct: 122 ACVRLENAGAGAMLHSVGLRCGFFASVVVGTALVDMYAKCRRLGAAQQVFGEMEEKNVAT 181
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
+ ++ S A+ L M V PN T+ +++S A ++ GK +H V+
Sbjct: 182 FTALVTGFVLSRRPHDAVLLVREMERSGVAPNLMTYSSLLSSFASPEDIDHGKQVHCAVL 241
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFL 329
K LE D FV SALV Y+KC E +S ++ VS+N++I G + F
Sbjct: 242 KKGLEHDPFVLSALVTMYSKCGIWEDFVKVQMSVSCQDQVSFNSVISGLSCLGRGKEAFQ 301
Query: 330 -LIELLQLGYRPNEFTFSHVLR----SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
+E+ + G + FTF+ +L+ SS + Q+H LI+++GY++ V SL++ YA
Sbjct: 302 HFLEMRRHGTDMDVFTFASILKAIGSSSSLLEGRQVHTLILKIGYDSVVDVQNSLISMYA 361
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
+ G I E+ + +E P++VSWN +++
Sbjct: 362 RHGAI--------------------------------GESNGVFISMEAPNLVSWNSLMS 389
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK-KTEII 503
CA +G KEV+E+F+ MR + PD+ TF+S+L+ACS + + G L+K K ++
Sbjct: 390 GCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMKDKGYLV 449
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNG 552
+ T ++D+ G+ G + + + N M + + AL+SA ++G
Sbjct: 450 GARTKHYACMVDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHG 499
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 131/255 (51%), Gaps = 3/255 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
M ++NV +F ++++ + DA+ + M G P T+ LLS + G
Sbjct: 174 MEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGVAPNLMTYSSLLSSFASPEDIDHG 233
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +VLK GL D FV +AL+ +Y + G ++ V V + + V++NS++S
Sbjct: 234 KQVHCAVLKKGLE-HDPFVLSALVTMYSKCGIWEDFVKVQMSVSCQDQVSFNSVISGLSC 292
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ F E+ R + +F ++ + + L G Q+H L++K G+D + V
Sbjct: 293 LGRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSLLEGRQVHTLILKIGYDSVVDV 352
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY + I + +F +E ++VSWN+++ A+ + + +E++ +M V
Sbjct: 353 QNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHV 412
Query: 239 FPNQTTFVYVINSCA 253
P+ TF+ V+ +C+
Sbjct: 413 QPDHITFLSVLTACS 427
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 3/171 (1%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQL 61
++ VSFNS+IS S G ++A + FL M G + FTF +L S + +EG Q+
Sbjct: 278 QDQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSLLEGRQV 337
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+LK G + + V +L+ +Y RHG + E VF M +LV+WNS++S +HG
Sbjct: 338 HTLILKIG-YDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGH 396
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
++ + +F ++ R V +F+ V+ S+ ++ G + L+ G+
Sbjct: 397 GKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMKDKGY 447
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 151/564 (26%), Positives = 268/564 (47%), Gaps = 39/564 (6%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF+++PR+ V+WN++++ G + L + +A + + + +
Sbjct: 49 VFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARR 108
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
G Q+ L +K+G + A++L+++Y +C + A ++F + R+ VSWN +I
Sbjct: 109 PAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAG 168
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
ES + ALEL+L M + + P++ TF ++ + G + L +H K++K
Sbjct: 169 YTESGDMASALELFLEMEREGLAPDEATFASLLTAVEG-PSCFLMHQLHGKIVKYGSALG 227
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISN-KNIVSWNALILGYASKS-SPTSIFLLIELL 334
+ V +A + Y++C +L+ + F I + ++++SWNA++ Y ++ + ++
Sbjct: 228 LTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMM 287
Query: 335 Q-LGYRPNEFTFSHVLRSSLAF-----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL 388
Q G P+ ++F+ ++ S Q +H L+I+ E V +L+ Y +
Sbjct: 288 QESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTR--- 344
Query: 389 ISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
YN + K + L D VSWN ++ +
Sbjct: 345 --------------------------YNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQ 378
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
+G + L+ F+ M + + D Y F + L + S+L L LG +HGL+ + S+D F
Sbjct: 379 HGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASND-F 437
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V + LI MY K G I + K F E + + W A+I +G A+ F EM
Sbjct: 438 VSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRK 497
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
D + + ++T+C H GLV EG E+ M YGV M+HY C VDL R G L +A
Sbjct: 498 APLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKA 557
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
+K+I +MPF P+A++W T L C+
Sbjct: 558 KKLIDSMPFEPDAMVWMTLLGACR 581
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 156/568 (27%), Positives = 283/568 (49%), Gaps = 52/568 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
+P R+ VS+N++++A + G +A R+ M +G F G L ++ P G
Sbjct: 53 VPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIG 112
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
AQLQ+ LK+GL + F +ALL +Y + G + + VF+ MP ++ V+WN++++ + +
Sbjct: 113 AQLQSLALKSGL-ANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTE 171
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + LF E+ R +A E++F ++ + Q+HG ++K G L V
Sbjct: 172 SGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCF-LMHQLHGKIVKYGSALGLTV 230
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
N+ + Y QC + + ++F + +IRD++SWN ++GA + +A++ ++RM +
Sbjct: 231 LNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQES 290
Query: 238 -VFPNQTTFVYVINSCAGL-QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN--- 292
V P+ +F +I+SC+ + G+ IH VIK+ALE V +AL+ Y + +
Sbjct: 291 GVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCM 350
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
+E A+ CF+ + K+ VSWN+++ GY+ S ++ + R +E+ FS LRS
Sbjct: 351 MEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRS 410
Query: 352 SLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
S +LQL H L+I G+ + ++V SL+ Y+KSG+I DA
Sbjct: 411 SSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDAR-------------- 456
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
K + ++ V WN +I A +G + V LF M +
Sbjct: 457 ------------------KSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKA 498
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLI--KKTEIISSDTFVCNMLIDMYGKCGSIGS 525
D+ TFV L+++CS + GS + + K + + + C +D+YG+ G +
Sbjct: 499 PLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACG--VDLYGRAGQLDK 556
Query: 526 SVKIFNEMT-DRNVITWTALISALGLNG 552
+ K+ + M + + + W L+ A ++G
Sbjct: 557 AKKLIDSMPFEPDAMVWMTLLGACRIHG 584
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 225/495 (45%), Gaps = 51/495 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGA- 59
MP+RN VS+N++I+ Y+ G + AL +FL M G P + TF LL+ VEG
Sbjct: 154 MPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTA-----VEGPS 208
Query: 60 -----QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-KSLVTWNSIV 113
QL ++K G + A+ Y + G L + +F+ + + L++WN+++
Sbjct: 209 CFLMHQLHGKIVKYGSALGLTVLNAAITA-YSQCGSLKDSRRIFDGIGDIRDLISWNAML 267
Query: 114 SIFGKHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNE-QDLEFGEQIHGLVIKNG 171
+ +G ++ M F +++ S V SF +I S D G IHGLVIK+
Sbjct: 268 GAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSA 327
Query: 172 FDYELLVANSLVNMYFQ----CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKAL 227
+ V N+L+ MY + C + A K F + ++D VSWN+++ ++ AL
Sbjct: 328 LEGVTPVCNALIAMYTRYNENCM-MEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADAL 386
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
+ + M + V ++ F + S + L LGK IH VI + + FV S+L+ Y
Sbjct: 387 KFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMY 446
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFS 346
+K ++ A F E + V WNA+I GYA ++ +L E+LQ + TF
Sbjct: 447 SKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFV 506
Query: 347 HVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
++ S H ++ G E +L ++ T Y +P +
Sbjct: 507 GLITSC-------SHAGLVDEGSE----ILNTMETKYG----------------VPLRME 539
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+Y R GQ ++ KL+ + PD + W ++ AC +G+ + ++ ++ A
Sbjct: 540 HYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVA 599
Query: 466 RIYPDNYTFVSLLSA 480
P ++ LLS+
Sbjct: 600 E--PRQHSTYVLLSS 612
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 198/430 (46%), Gaps = 49/430 (11%)
Query: 180 NSLVNMYFQCA--GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
N L+ Y + + G+ +A ++F +V RD VSWN ++ A A S +A L M
Sbjct: 29 NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ N + S A + +G + + +K+ L +VF SAL+D YAKC + A
Sbjct: 89 LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148
Query: 298 LCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS---SL 353
F + +N VSWNALI GY S +++ L +E+ + G P+E TF+ +L +
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPS 208
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
F + QLH I++ G VL + +T+Y++ G + D+ + R ++ N + G
Sbjct: 209 CFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLG 268
Query: 414 IYNRTGQYNETVKLLSQLER-----PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
Y G +E +K ++ + PD+ S+ +I++C+ +G
Sbjct: 269 AYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGH----------------- 311
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS---IGS 525
D++ G +HGL+ K+ + T VCN LI MY + +
Sbjct: 312 -DDHQ----------------GRVIHGLVIKS-ALEGVTPVCNALIAMYTRYNENCMMED 353
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ K FN + ++ ++W ++++ +G + AL+ FR M + D A A L +
Sbjct: 354 AYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSE 413
Query: 586 GGLVREGMEL 595
+++ G ++
Sbjct: 414 LAVLQLGKQI 423
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 144/366 (39%), Gaps = 82/366 (22%)
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL 349
D L A F E+ ++ VSWNAL+ A S + P + LL + G N F L
Sbjct: 41 DGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSAL 100
Query: 350 RSSLAFQL----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
RS+ + QL L ++ G N + +L+ YAK G + DA
Sbjct: 101 RSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDA------------- 147
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+ G+ R + VSWN +IA +GD LELF M
Sbjct: 148 --RQVFDGMPER-----------------NTVSWNALIAGYTESGDMASALELFLEMERE 188
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ PD TF SLL+A L LHG I K T V N I Y +CGS+
Sbjct: 189 GLAPDEATFASLLTAVEGPSCF-LMHQLHGKIVKYGSALGLT-VLNAAITAYSQCGSLKD 246
Query: 526 SVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR 584
S +IF+ + D R++I+W A+ L A
Sbjct: 247 SRRIFDGIGDIRDLISWNAM-----------------------------------LGAYT 271
Query: 585 HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
H G+ E M+ F RM + GV P+M + ++ +GH ++I + L+
Sbjct: 272 HNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVI-------HGLVI 324
Query: 645 RTFLEG 650
++ LEG
Sbjct: 325 KSALEG 330
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 404 AVVPANIIAGIYNRTGQ--YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
A P N + Y+R+ ++ ++ R D VSWN ++AA A +G + E L +
Sbjct: 24 ATTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRA 83
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M A + + + S L + + A+G+ L L K+ + +++ F + L+D+Y KCG
Sbjct: 84 MHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGL-ANNVFAASALLDVYAKCG 142
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ + ++F+ M +RN ++W ALI+ +G ALE F EME G PD ++LT
Sbjct: 143 RVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLT 202
Query: 582 ACR----------HGGLVREGMEL 595
A HG +V+ G L
Sbjct: 203 AVEGPSCFLMHQLHGKIVKYGSAL 226
>gi|297819724|ref|XP_002877745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323583|gb|EFH54004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 764
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 169/616 (27%), Positives = 302/616 (49%), Gaps = 41/616 (6%)
Query: 50 CDSLNPVEGA-QLQASVLKNGLFCAD--AFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
C S+ ++ A QL A +L G A + L+ +Y R G L++ +F+ MP +++
Sbjct: 17 CVSITALKRACQLHAIILTAGAGSASESPYKNNNLISMYVRCGSLEQARKLFDKMPERNV 76
Query: 107 VTWNSIVSIFGKH-GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHG 165
V++N++ S + ++ + L ++ + S+F ++ + +D+ G +H
Sbjct: 77 VSYNALYSAYSRNLDYASYAFSLINQMASESLKPNSSTFTSLVQVCTVLEDVLMGSLLHS 136
Query: 166 LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK 225
+IK G+ ++V S++ MY C + SA ++F+ V D V+WNT+I + ++
Sbjct: 137 QIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFECVNGGDAVAWNTMIVGIFRNDKIED 196
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCA--GLQNSILGKSIHAKVIKNALECDVFVGSAL 283
L L+ M + V P Q T+ V+N+C+ G +GK IHA++I + + D+ V +AL
Sbjct: 197 GLMLFRSMLMSGVDPTQFTYSMVLNACSKLGSYRYSVGKLIHARMIVSDILADLPVENAL 256
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGY-RPN 341
+D Y C +++ A F +I N N+VSWN++I G + +I + LL++ RP+
Sbjct: 257 LDMYCSCGDMKEAFYVFGKIHNPNLVSWNSIISGCSENGFGEQAILMYRRLLRISTPRPD 316
Query: 342 EFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
E+TFS + ++ E +++ G L+ VT L
Sbjct: 317 EYTFSAAIPATA----------------EPEKFIHGKLLHGQ------------VTKLGY 348
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
R+V + +Y + G+ K+ + D+V W +I + G+ + ++LF
Sbjct: 349 ERSVFVGTTLLSMYFKNGEAESAQKVFGVITERDVVLWTEMIVGESRVGNSECAVQLFIE 408
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M + D ++ S+L ACS + L G H L KT + V L+DMYGK G
Sbjct: 409 MYREKNRTDGFSLSSVLGACSDMAMLRQGQVFHSLAIKTGF-DNVMSVSGALVDMYGKNG 467
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
++ IF+ +++ ++ W +++ A +G ++A F ++ GF PD V +++L
Sbjct: 468 KYETAESIFSLVSNPDLKCWNSMLGAYSQHGMVEKAQSFFEQILENGFTPDAVTYLSLLA 527
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN- 640
AC H G +EG L+ +M + G+ HY C+V L+ + G L EA ++I P P N
Sbjct: 528 ACSHKGSTQEGKFLWNQM-KEQGITAGFKHYSCMVSLVSKAGLLGEALELIKQSP-PENN 585
Query: 641 -ALIWRTFLEGCQRCR 655
A +WRT L C R
Sbjct: 586 QAELWRTLLSACVNAR 601
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 153/562 (27%), Positives = 268/562 (47%), Gaps = 51/562 (9%)
Query: 1 MPDRNVVSFNSIISAYSR-CGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-E 57
MP+RNVVS+N++ SAYSR Y A + M + +P TF L+ C L V
Sbjct: 71 MPERNVVSYNALYSAYSRNLDYASYAFSLINQMASESLKPNSSTFTSLVQVCTVLEDVLM 130
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNS-IVSIF 116
G+ L + ++K G + + V T++LG+Y G L+ +FE + V WN+ IV IF
Sbjct: 131 GSLLHSQIIKLG-YSDNVVVQTSVLGMYSSCGDLESARRIFECVNGGDAVAWNTMIVGIF 189
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF--GEQIHGLVIKNGFDY 174
++ +ED + LF ++ S V T+ ++ V++ S + G+ IH +I +
Sbjct: 190 -RNDKIEDGLMLFRSMLMSGVDPTQFTYSMVLNACSKLGSYRYSVGKLIHARMIVSDILA 248
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR-M 233
+L V N+L++MY C + A +F + ++VSWN+II +E+ +A+ +Y R +
Sbjct: 249 DLPVENALLDMYCSCGDMKEAFYVFGKIHNPNLVSWNSIISGCSENGFGEQAILMYRRLL 308
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ P++ TF I + A + I GK +H +V K E VFVG+ L+ Y K
Sbjct: 309 RISTPRPDEYTFSAAIPATAEPEKFIHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNGEA 368
Query: 294 EGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
E A F I+ +++V W +I+G + +S ++ L IE+ + R + F+ S VL +
Sbjct: 369 ESAQKVFGVITERDVVLWTEMIVGESRVGNSECAVQLFIEMYREKNRTDGFSLSSVLGAC 428
Query: 353 LAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+L+ H L I+ G++N V G+L+
Sbjct: 429 SDMAMLRQGQVFHSLAIKTGFDNVMSVSGALVD--------------------------- 461
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+Y + G+Y + S + PD+ WN ++ A + +G ++ F+ +
Sbjct: 462 -----MYGKNGKYETAESIFSLVSNPDLKCWNSMLGAYSQHGMVEKAQSFFEQILENGFT 516
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSV 527
PD T++SLL+ACS + G L +K+ I + + C ++ + K G +G ++
Sbjct: 517 PDAVTYLSLLAACSHKGSTQEGKFLWNQMKEQGITAGFKHYSC--MVSLVSKAGLLGEAL 574
Query: 528 KIFNEMTDRN--VITWTALISA 547
++ + N W L+SA
Sbjct: 575 ELIKQSPPENNQAELWRTLLSA 596
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 234/489 (47%), Gaps = 45/489 (9%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE---GAQ 60
+ V++N++I R +ED L +F M+ G +PTQFT+ +L +C L G
Sbjct: 177 DAVAWNTMIVGIFRNDKIEDGLMLFRSMLMSGVDPTQFTYSMVLNACSKLGSYRYSVGKL 236
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ A ++ + + AD V ALL +Y G + E VF + +LV+WNSI+S ++G
Sbjct: 237 IHARMIVSDIL-ADLPVENALLDMYCSCGDMKEAFYVFGKIHNPNLVSWNSIISGCSENG 295
Query: 121 FVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
F E + ++ L+R S E +F I + + G+ +HG V K G++ + V
Sbjct: 296 FGEQAILMYRRLLRISTPRPDEYTFSAAIPATAEPEKFIHGKLLHGQVTKLGYERSVFVG 355
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+L++MYF+ SA+K+F + RDVV W +I + N A++L++ M +
Sbjct: 356 TTLLSMYFKNGEAESAQKVFGVITERDVVLWTEMIVGESRVGNSECAVQLFIEMYREKNR 415
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
+ + V+ +C+ + G+ H+ IK + + V ALVD Y K E A
Sbjct: 416 TDGFSLSSVLGACSDMAMLRQGQVFHSLAIKTGFDNVMSVSGALVDMYGKNGKYETAESI 475
Query: 300 FSEISNKNIVSWNALILGYASK---SSPTSIFLLIELLQLGYRPNEFTFSHVLRS----- 351
FS +SN ++ WN+++ Y+ S F ++L+ G+ P+ T+ +L +
Sbjct: 476 FSLVSNPDLKCWNSMLGAYSQHGMVEKAQSFFE--QILENGFTPDAVTYLSLLAACSHKG 533
Query: 352 ---SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV-------TALNI 401
F Q+ I G+++Y +++ +K+GL+ +AL + +
Sbjct: 534 STQEGKFLWNQMKEQGITAGFKHY----SCMVSLVSKAGLLGEALELIKQSPPENNQAEL 589
Query: 402 PRAVVPA-----NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC-AHNGDYKEV 455
R ++ A N+ G+Y ++ +KL P+ + +I+++ A NG +K+V
Sbjct: 590 WRTLLSACVNARNLQIGLY----AADQILKL-----DPEDTATHILLSNLYAVNGRWKDV 640
Query: 456 LELFKYMRA 464
E+ + +R
Sbjct: 641 AEMRRKIRG 649
>gi|218189824|gb|EEC72251.1| hypothetical protein OsI_05387 [Oryza sativa Indica Group]
Length = 566
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 161/502 (32%), Positives = 248/502 (49%), Gaps = 44/502 (8%)
Query: 160 GEQIHGLVIKNGFDYELLVANS-LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+Q H K GF AN+ L+ Y + + A+ +F + +R V+WNT+I A
Sbjct: 30 ADQCHAAATKLGFSASNPFANTALLAFYCRSRRLREAQHLFDQMPLRTAVTWNTLIYGHA 89
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+S A+ + RM V P ++ V+ +C L+N+ G +H+ ++ V
Sbjct: 90 QSTAPDLAVAAFARMVRAGVSPTASSVSSVLVACVRLENAGAGAMLHSVGLRCGFFASVV 149
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLG 337
VG+ALVD YAKC L A F E+ KN+ ++ AL+ G+ P LL+ E+ + G
Sbjct: 150 VGTALVDMYAKCRRLGAAQQVFGEMEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSG 209
Query: 338 YRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
PN T+S +L S + + + Q+HC +++ G E+ +VL +L+T Y+K G+
Sbjct: 210 VAPNLMTYSSLLSSFASPEDIDHGKQVHCAVLKKGLEHDPFVLSALVTMYSKCGI----- 264
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
+ + VK+ + D VS+N VI+ + G K
Sbjct: 265 ---------------------------WEDFVKVQMSVSCQDQVSFNSVISGLSCLGRGK 297
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV--CN 511
E + F MR D +TF S+L A +L G +H LI K I D+ V N
Sbjct: 298 EAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSLLEGRQVHTLILK---IGYDSVVDVQN 354
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
LI MY + G+IG S +F M N+++W +L+S +G + +E F +M L +P
Sbjct: 355 SLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHVQP 414
Query: 572 DRVALIAVLTACRHGGLVREGMELFERM-NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
D + ++VLTAC H GLV +G+E F M ++ Y V HY C+VDLL R G+L EAE
Sbjct: 415 DHITFLSVLTACSHVGLVDKGLEYFNLMKDKGYLVGARTKHYACMVDLLGRAGYLNEAEY 474
Query: 631 IITTMPFPPNALIWRTFLEGCQ 652
+I MP P A ++R L CQ
Sbjct: 475 LINGMPIKPGASVYRALLSACQ 496
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 147/530 (27%), Positives = 258/530 (48%), Gaps = 44/530 (8%)
Query: 35 RGF-----EPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
RGF T F LL+ P Q A+ K G ++ F TALL Y R
Sbjct: 2 RGFLRHAESRTPRAFVQLLADQPPRPSAADQCHAAATKLGFSASNPFANTALLAFYCRSR 61
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH 149
L E +F+ MP ++ VTWN+++ + + + F +VR+ V+ T SS V+
Sbjct: 62 RLREAQHLFDQMPLRTAVTWNTLIYGHAQSTAPDLAVAAFARMVRAGVSPTASSVSSVLV 121
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
++ G +H + ++ GF ++V +LV+MY +C + +A+++F ++E ++V +
Sbjct: 122 ACVRLENAGAGAMLHSVGLRCGFFASVVVGTALVDMYAKCRRLGAAQQVFGEMEEKNVAT 181
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
+ ++ S A+ L M V PN T+ +++S A ++ GK +H V+
Sbjct: 182 FTALVTGFVLSRRPHDAVLLVREMERSGVAPNLMTYSSLLSSFASPEDIDHGKQVHCAVL 241
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFL 329
K LE D FV SALV Y+KC E +S ++ VS+N++I G + F
Sbjct: 242 KKGLEHDPFVLSALVTMYSKCGIWEDFVKVQMSVSCQDQVSFNSVISGLSCLGRGKEAFQ 301
Query: 330 -LIELLQLGYRPNEFTFSHVLR----SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
+E+ + G + FTF+ +L+ SS + Q+H LI+++GY++ V SL++ YA
Sbjct: 302 HFLEMRRHGTDMDVFTFASILKAIGSSSSLLEGRQVHTLILKIGYDSVVDVQNSLISMYA 361
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
+ G I E+ + +E P++VSWN +++
Sbjct: 362 RHGAI--------------------------------GESNGVFISMEAPNLVSWNSLMS 389
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK-KTEII 503
CA +G KEV+E+F+ MR + PD+ TF+S+L+ACS + + G L+K K ++
Sbjct: 390 GCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMKDKGYLV 449
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNG 552
+ T ++D+ G+ G + + + N M + + AL+SA ++G
Sbjct: 450 GARTKHYACMVDLLGRAGYLNEAEYLINGMPIKPGASVYRALLSACQIHG 499
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 131/255 (51%), Gaps = 3/255 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
M ++NV +F ++++ + DA+ + M G P T+ LLS + G
Sbjct: 174 MEEKNVATFTALVTGFVLSRRPHDAVLLVREMERSGVAPNLMTYSSLLSSFASPEDIDHG 233
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +VLK GL D FV +AL+ +Y + G ++ V V + + V++NS++S
Sbjct: 234 KQVHCAVLKKGLE-HDPFVLSALVTMYSKCGIWEDFVKVQMSVSCQDQVSFNSVISGLSC 292
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ F E+ R + +F ++ + + L G Q+H L++K G+D + V
Sbjct: 293 LGRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSLLEGRQVHTLILKIGYDSVVDV 352
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY + I + +F +E ++VSWN+++ A+ + + +E++ +M V
Sbjct: 353 QNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHV 412
Query: 239 FPNQTTFVYVINSCA 253
P+ TF+ V+ +C+
Sbjct: 413 QPDHITFLSVLTACS 427
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 90/171 (52%), Gaps = 3/171 (1%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQL 61
++ VSFNS+IS S G ++A + FL M G + FTF +L S + +EG Q+
Sbjct: 278 QDQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASILKAIGSSSSLLEGRQV 337
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+LK G + + V +L+ +Y RHG + E VF M +LV+WNS++S +HG
Sbjct: 338 HTLILKIG-YDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGH 396
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
++ + +F ++ R V +F+ V+ S+ ++ G + L+ G+
Sbjct: 397 GKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMKDKGY 447
>gi|33146592|dbj|BAC79788.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 749
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 155/485 (31%), Positives = 245/485 (50%), Gaps = 43/485 (8%)
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L +L+ Y + + A+ +F + R V+WNT+I A S G A+ + RM+
Sbjct: 94 LFATTALLAFYCRSRRLPEAQHLFDQMPARTAVTWNTLIHGHARSAAPGLAVAAFARMAR 153
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V P ++ V+ +C L+++ G ++H+ + + V VG+ALVD YAKC +L
Sbjct: 154 AGVSPTASSVSSVLVACVRLEDAAAGATLHSVGLMHGFCASVVVGTALVDMYAKCHHLGA 213
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLA 354
A F E+ KN+ ++ AL+ G+ P LL+ E+ + G PN T+S +L S +
Sbjct: 214 AQQVFREMEEKNVATFTALVAGFVLSRRPHDAMLLVREMERSGVAPNLMTYSSLLSSFAS 273
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ + Q+HC +++ G E+ ++VL +L+T Y+K G++ +
Sbjct: 274 PEDIDHGKQVHCAVLKKGLEHDQFVLSALVTMYSKCGILEN------------------- 314
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
VK+ + D VS+N VI+ + G KE + F MR D
Sbjct: 315 -------------FVKVQMSVSCQDQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMD 361
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV--CNMLIDMYGKCGSIGSSVK 528
+TF S+L A +L G +H LI K I D+ V N LI MY + G+IG S
Sbjct: 362 VFTFASVLKAIGSSSSLLEGRQVHTLILK---IGYDSVVDVQNSLISMYARHGAIGESNG 418
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F M N+++W +L+S +G + +E F +M L +PD + ++VLTAC H GL
Sbjct: 419 VFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGL 478
Query: 589 VREGMELFERM-NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
V +G+E F M ++ Y V +HY C+VDLL R G+L EAE +I MP P A ++R
Sbjct: 479 VDKGLEYFNLMKDKGYLVGARTEHYACMVDLLGRAGYLNEAEYLINGMPIKPGASVYRAL 538
Query: 648 LEGCQ 652
L CQ
Sbjct: 539 LSACQ 543
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 246/493 (49%), Gaps = 39/493 (7%)
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K G ++ F TALL Y R L E +F+ MP ++ VTWN+++ + +
Sbjct: 86 KLGFLASNLFATTALLAFYCRSRRLPEAQHLFDQMPARTAVTWNTLIHGHARSAAPGLAV 145
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
F + R+ V+ T SS V+ +D G +H + + +GF ++V +LV+MY
Sbjct: 146 AAFARMARAGVSPTASSVSSVLVACVRLEDAAAGATLHSVGLMHGFCASVVVGTALVDMY 205
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+C + +A+++F+++E ++V ++ ++ S A+ L M V PN T+
Sbjct: 206 AKCHHLGAAQQVFREMEEKNVATFTALVAGFVLSRRPHDAMLLVREMERSGVAPNLMTYS 265
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
+++S A ++ GK +H V+K LE D FV SALV Y+KC LE +S +
Sbjct: 266 SLLSSFASPEDIDHGKQVHCAVLKKGLEHDQFVLSALVTMYSKCGILENFVKVQMSVSCQ 325
Query: 307 NIVSWNALILGYASKSSPTSIFL-LIELLQLGYRPNEFTFSHVLR----SSLAFQLLQLH 361
+ VS+N++I G + F +E+ + G + FTF+ VL+ SS + Q+H
Sbjct: 326 DQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASVLKAIGSSSSLLEGRQVH 385
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
LI+++GY++ V SL++ YA+ G I
Sbjct: 386 TLILKIGYDSVVDVQNSLISMYARHGAI-------------------------------- 413
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
E+ + +E P++VSWN +++ CA +G KEV+E+F+ MR + PD+ TF+S+L+AC
Sbjct: 414 GESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTAC 473
Query: 482 SKLCNLALGSSLHGLIK-KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVI 539
S + + G L+K K ++ + T ++D+ G+ G + + + N M +
Sbjct: 474 SHVGLVDKGLEYFNLMKDKGYLVGARTEHYACMVDLLGRAGYLNEAEYLINGMPIKPGAS 533
Query: 540 TWTALISALGLNG 552
+ AL+SA ++G
Sbjct: 534 VYRALLSACQIHG 546
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 131/255 (51%), Gaps = 3/255 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
M ++NV +F ++++ + DA+ + M G P T+ LLS + G
Sbjct: 221 MEEKNVATFTALVAGFVLSRRPHDAMLLVREMERSGVAPNLMTYSSLLSSFASPEDIDHG 280
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +VLK GL D FV +AL+ +Y + G L+ V V + + V++NS++S
Sbjct: 281 KQVHCAVLKKGLE-HDQFVLSALVTMYSKCGILENFVKVQMSVSCQDQVSFNSVISGLSC 339
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ F E+ R + +F V+ + + L G Q+H L++K G+D + V
Sbjct: 340 LGRGKEAFQHFLEMRRHGTDMDVFTFASVLKAIGSSSSLLEGRQVHTLILKIGYDSVVDV 399
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY + I + +F +E ++VSWN+++ A+ + + +E++ +M V
Sbjct: 400 QNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHV 459
Query: 239 FPNQTTFVYVINSCA 253
P+ TF+ V+ +C+
Sbjct: 460 QPDHITFLSVLTACS 474
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 145/300 (48%), Gaps = 23/300 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQL 61
++ VSFNS+IS S G ++A + FL M G + FTF +L S + +EG Q+
Sbjct: 325 QDQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASVLKAIGSSSSLLEGRQV 384
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+LK G + + V +L+ +Y RHG + E VF M +LV+WNS++S +HG
Sbjct: 385 HTLILKIG-YDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGH 443
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ + +F ++ R V +F+ V+ S+ ++ G + L+ G+ L+ A +
Sbjct: 444 GKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMKDKGY---LVGART 500
Query: 182 -----LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+V++ + + AE + + I+ S + AL + LE+ +R+S
Sbjct: 501 EHYACMVDLLGRAGYLNEAEYLINGMPIKPGAS---VYRALLSACQIHGNLEIVIRVSKR 557
Query: 237 IVFPN---QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
++ N + V + N+ AG G+ +A I+ A+ + G +L DF K N+
Sbjct: 558 LIELNPHDSSVHVQLSNAFAG-----DGRWGNAAEIREAMS-EYMSGGSLYDFLHKQHNV 611
>gi|302767656|ref|XP_002967248.1| hypothetical protein SELMODRAFT_61142 [Selaginella moellendorffii]
gi|300165239|gb|EFJ31847.1| hypothetical protein SELMODRAFT_61142 [Selaginella moellendorffii]
Length = 672
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 172/660 (26%), Positives = 310/660 (46%), Gaps = 47/660 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQL 61
+RN+ ++ ++A+++ G A+ +F M G E + F + +C SL + +
Sbjct: 48 ERNLFTWTIAMTAFAQNGDPRQAIHLFQAMCLDGVELDRVAFATAVGACSSLGDLHIGRS 107
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
S + F +DA + +L+ +Y + G +F+ + KS V + ++++ + +
Sbjct: 108 LHSTIATSSFQSDAVLRVSLINMYAKAGEFALAEELFQRLELKSAVAYTALIAAYSQFKM 167
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + L+ + VA + + + + ++E D G IH +I G D + VA++
Sbjct: 168 GREALGLYRAMHLEGVAPDKVAMLSALGACASEPD---GRAIHACIICCGSDGDDTVASA 224
Query: 182 LVNMYFQCAGIWSAEKMF--KDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
LV+MY + + SA+ +F + V V WN++I A +S + +ALEL+ +M ++ V
Sbjct: 225 LVSMYGRFQMLESAKSVFFHRRVPRSSVELWNSMISAYVQSGHHREALELFEKMELEGVA 284
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ T V ++ C+ L+ + IHA+ ++ ++ D V +L++ Y +C +LE A
Sbjct: 285 PDVVTIVEILGVCSVLRKLDKARMIHAQ-LRARVDADTAVVDSLLNVYRECRSLEDAVTV 343
Query: 300 FSEISN--KNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F E + ++ ++WN +I YA P L L+ L G P E T+ VL ++ +
Sbjct: 344 FREEAGGARDCIAWNTMIAAYAECGDPGMALKLFTLMDLHGVEPTEVTYVAVLGAASSLG 403
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L LH I G + +V SLM Y G +S A A
Sbjct: 404 ALTRGASLHHRIRSCGLDELPFVSNSLMQFYGSCGRLSSATA------------------ 445
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+ LER D VSWN ++ +G L +F M + +
Sbjct: 446 --------------VFHSLERRDEVSWNTIMGLYTQHGCCDTALVVFHGMELEGVRANVI 491
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T ++++AC+ + A G S+H + + + V + L+ MYGK G + ++ FN+
Sbjct: 492 TLTNVVTACTVTGDAAKGKSIHARVLSMGL-EHHSAVGSALVAMYGKFGMLDRAMSCFND 550
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
++ +N + W AL+S G + +E R M+ G + D + + VL AC HGGLV E
Sbjct: 551 ISAKNTVAWNALMSGFAQQGQSVETVELSRAMQLQGMESDSASYLVVLFACSHGGLVEEA 610
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F + V +HY C++DLL R G L AE + +MPF P++ W + + C+
Sbjct: 611 LSCFSNLVEDGSVAANDEHYGCLIDLLARAGWLDRAEDLFRSMPFEPDSTSWMSLVGACK 670
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 148/600 (24%), Positives = 263/600 (43%), Gaps = 43/600 (7%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G + + K+G + + ++G L+ +YG+ G L + + F + ++L TW ++ F
Sbjct: 3 QGKTIHDQMSKDG-YSRETYLGNLLVDMYGKCGSLRDAEAAFHSIRERNLFTWTIAMTAF 61
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G + LF + V L +F + S+ DL G +H + + F +
Sbjct: 62 AQNGDPRQAIHLFQAMCLDGVELDRVAFATAVGACSSLGDLHIGRSLHSTIATSSFQSDA 121
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++ SL+NMY + AE++F+ +E++ V++ +I A ++ + +AL LY M ++
Sbjct: 122 VLRVSLINMYAKAGEFALAEELFQRLELKSAVAYTALIAAYSQFKMGREALGLYRAMHLE 181
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P++ + + +CA + G++IHA +I + D V SALV Y + LE A
Sbjct: 182 GVAPDKVAMLSALGACASEPD---GRAIHACIICCGSDGDDTVASALVSMYGRFQMLESA 238
Query: 297 HLCF--SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSL 353
F + ++ WN++I Y L E ++L G P+ T +L
Sbjct: 239 KSVFFHRRVPRSSVELWNSMISAYVQSGHHREALELFEKMELEGVAPDVVTIVEILGVCS 298
Query: 354 AFQLLQLHCLI---IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ L +I +R + V+ SL+ Y + + DA+
Sbjct: 299 VLRKLDKARMIHAQLRARVDADTAVVDSLLNVYRECRSLEDAV----------------- 341
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
TV D ++WN +IAA A GD L+LF M + P
Sbjct: 342 -------------TVFREEAGGARDCIAWNTMIAAYAECGDPGMALKLFTLMDLHGVEPT 388
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
T+V++L A S L L G+SLH I+ + FV N L+ YG CG + S+ +F
Sbjct: 389 EVTYVAVLGAASSLGALTRGASLHHRIRSCG-LDELPFVSNSLMQFYGSCGRLSSATAVF 447
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + R+ ++W ++ +G AL F ME G + + + L V+TAC G
Sbjct: 448 HSLERRDEVSWNTIMGLYTQHGCCDTALVVFHGMELEGVRANVITLTNVVTACTVTGDAA 507
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+G + R+ S G+E +V + ++G L A + N + W + G
Sbjct: 508 KGKSIHARV-LSMGLEHHSAVGSALVAMYGKFGMLDRAMSCFNDIS-AKNTVAWNALMSG 565
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 172/339 (50%), Gaps = 4/339 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+P +V +NS+ISAY + G+ +AL +F M G P T +L C L ++ A
Sbjct: 247 VPRSSVELWNSMISAYVQSGHHREALELFEKMELEGVAPDVVTIVEILGVCSVLRKLDKA 306
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP--RKSLVTWNSIVSIFG 117
++ + L+ + AD V +LL +Y L++ V+VF + + + WN++++ +
Sbjct: 307 RMIHAQLRARVD-ADTAVVDSLLNVYRECRSLEDAVTVFREEAGGARDCIAWNTMIAAYA 365
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G + LF + V TE ++V V+ S+ L G +H + G D
Sbjct: 366 ECGDPGMALKLFTLMDLHGVEPTEVTYVAVLGAASSLGALTRGASLHHRIRSCGLDELPF 425
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V+NSL+ Y C + SA +F +E RD VSWNTI+G + AL ++ M ++
Sbjct: 426 VSNSLMQFYGSCGRLSSATAVFHSLERRDEVSWNTIMGLYTQHGCCDTALVVFHGMELEG 485
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V N T V+ +C ++ GKSIHA+V+ LE VGSALV Y K L+ A
Sbjct: 486 VRANVITLTNVVTACTVTGDAAKGKSIHARVLSMGLEHHSAVGSALVAMYGKFGMLDRAM 545
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
CF++IS KN V+WNAL+ G+A + L +QL
Sbjct: 546 SCFNDISAKNTVAWNALMSGFAQQGQSVETVELSRAMQL 584
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 205/455 (45%), Gaps = 39/455 (8%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
LE G+ IH + K+G+ E + N LV+MY +C + AE F + R++ +W + A
Sbjct: 1 LEQGKTIHDQMSKDGYSRETYLGNLLVDMYGKCGSLRDAEAAFHSIRERNLFTWTIAMTA 60
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
A++ + +A+ L+ M +D V ++ F + +C+ L + +G+S+H+ + ++ + D
Sbjct: 61 FAQNGDPRQAIHLFQAMCLDGVELDRVAFATAVGACSSLGDLHIGRSLHSTIATSSFQSD 120
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
+ +L++ YAK A F + K+ V++ ALI Y+ L + L
Sbjct: 121 AVLRVSLINMYAKAGEFALAEELFQRLELKSAVAYTALIAAYSQFKMGREALGLYRAMHL 180
Query: 337 -GYRPNEFTFSHVLRSSLAF-QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
G P++ L + + +H II G + + V +L++ Y + ++ A +
Sbjct: 181 EGVAPDKVAMLSALGACASEPDGRAIHACIICCGSDGDDTVASALVSMYGRFQMLESAKS 240
Query: 395 FVTALNIPRAVVPA-NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
+PR+ V N + Y ++G + E ++L ++E +
Sbjct: 241 VFFHRRVPRSSVELWNSMISAYVQSGHHREALELFEKMELEGVA---------------- 284
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
PD T V +L CS L L +H ++ + +DT V + L
Sbjct: 285 ---------------PDVVTIVEILGVCSVLRKLDKARMIHAQLRAR--VDADTAVVDSL 327
Query: 514 IDMYGKCGSIGSSVKIFNEMTD--RNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
+++Y +C S+ +V +F E R+ I W +I+A G AL+ F M+ G +P
Sbjct: 328 LNVYRECRSLEDAVTVFREEAGGARDCIAWNTMIAAYAECGDPGMALKLFTLMDLHGVEP 387
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
V +AVL A G + G L R+ RS G++
Sbjct: 388 TEVTYVAVLGAASSLGALTRGASLHHRI-RSCGLD 421
>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 173/662 (26%), Positives = 317/662 (47%), Gaps = 46/662 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MPDR ++N++I AY G AL ++ M G +F LL +C L + G
Sbjct: 105 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 164
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIVSIFG 117
++L + ++K G + + F+ AL+ +Y ++ L +F+ K V WNSI+S +
Sbjct: 165 SELHSLLVKLG-YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 223
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYEL 176
G + + LF E+ + A + V + + G++IH V+K+ EL
Sbjct: 224 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 283
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V N+L+ MY +C + AE++ + + DVV+WN++I ++ + +ALE + M
Sbjct: 284 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 343
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
++ + +I + L N + G +HA VIK+ + ++ VG+ L+D Y+KC+
Sbjct: 344 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYM 403
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F + +K+++SW +I GYA ++ L ++ + +E +LR+S
Sbjct: 404 GRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVL 463
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ + ++HC I+R G + V N +
Sbjct: 464 KSMLIVKEIHCHILRKGLLD---------------------------------TVIQNEL 490
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y + ++ ++ D+VSW +I++ A NG+ E +ELF+ M + D+
Sbjct: 491 VDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADS 550
Query: 472 YTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ +LSA + L L G +H L++K + V ++DMY CG + S+ +F
Sbjct: 551 VALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA--VVDMYACCGDLQSAKAVF 608
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + + ++ +T++I+A G++G + A+E F +M PD ++ +A+L AC H GL+
Sbjct: 609 DRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLD 668
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
EG + M Y +EP +HY C+VD+L R + EA + + M P A +W L
Sbjct: 669 EGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAA 728
Query: 651 CQ 652
C+
Sbjct: 729 CR 730
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 256/506 (50%), Gaps = 41/506 (8%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF++MP ++ WN+++ + +G + L+ + V L SSF ++ + +D
Sbjct: 101 VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRD 160
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIG 215
+ G ++H L++K G+ + N+LV+MY + + +A ++F + + D V WN+I+
Sbjct: 161 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 220
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE- 274
+ + S + LEL+ M + PN T V + +C G + LGK IHA V+K++
Sbjct: 221 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 280
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIEL 333
+++V +AL+ Y +C + A +++N ++V+WN+LI GY ++ ++
Sbjct: 281 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 340
Query: 334 LQLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
+ G++ +E + + ++ R S ++LH +I+ G+++ V +L+ Y+K L
Sbjct: 341 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL- 399
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
+ RA + ++ D++SW VIA A N
Sbjct: 400 --------TCYMGRAFL-----------------------RMHDKDLISWTTVIAGYAQN 428
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
+ E LELF+ + R+ D S+L A S L ++ + +H I + ++ DT +
Sbjct: 429 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL--DTVI 486
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
N L+D+YGKC ++G + ++F + ++V++WT++IS+ LNG A+E FR M G
Sbjct: 487 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 546
Query: 570 KPDRVALIAVLTACRHGGLVREGMEL 595
D VAL+ +L+A + +G E+
Sbjct: 547 SADSVALLCILSAAASLSALNKGREI 572
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 181/391 (46%), Gaps = 30/391 (7%)
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
S EK+F ++ R +WNT+IGA + AL LY M V+ V ++F ++ +CA
Sbjct: 97 SQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACA 156
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-NIVSWN 312
L++ G +H+ ++K F+ +ALV YAK D+L A F K + V WN
Sbjct: 157 KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWN 216
Query: 313 ALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYEN 371
+++ Y+ S S ++ L E+ G PN +T L + F +L G E
Sbjct: 217 SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL-------GKEI 269
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
+ VL KS S L AL +Y R G+ + ++L Q+
Sbjct: 270 HASVL--------KSSTHSSELYVCNAL------------IAMYTRCGKMPQAERILRQM 309
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
D+V+WN +I N YKE LE F M AA D + S+++A +L NL G
Sbjct: 310 NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGM 369
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
LH + K S+ V N LIDMY KC + F M D+++I+WT +I+ N
Sbjct: 370 ELHAYVIK-HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 428
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
ALE FR++ + D + L ++L A
Sbjct: 429 DCHVEALELFRDVAKKRMEIDEMILGSILRA 459
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 5/222 (2%)
Query: 432 ERPDIVS--WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
E PD + WN +I A NG+ L L+ MR + +F +LL AC+KL ++
Sbjct: 104 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 163
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISAL 548
GS LH L+ K S+ F+ N L+ MY K + ++ ++F+ ++ + + W +++S+
Sbjct: 164 GSELHSLLVKLGYHSTG-FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 222
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
+G + LE FREM G P+ +++ LTAC + G E+ + +S E
Sbjct: 223 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 282
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + ++ + R G + +AE+I+ M + + W + ++G
Sbjct: 283 LYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKG 323
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPD 572
++++ GK ++ S K+F+EM DR W +I A NG AL + M G
Sbjct: 86 VLELCGKRRAV-SQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 144
Query: 573 RVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII 632
+ A+L AC +R G EL + + G + +V + + L A ++
Sbjct: 145 LSSFPALLKACAKLRDIRSGSELHSLLVK-LGYHSTGFIVNALVSMYAKNDDLSAARRLF 203
Query: 633 TTMPFPPNALIWRTFL 648
+A++W + L
Sbjct: 204 DGFQEKGDAVLWNSIL 219
>gi|302799934|ref|XP_002981725.1| hypothetical protein SELMODRAFT_115145 [Selaginella moellendorffii]
gi|300150557|gb|EFJ17207.1| hypothetical protein SELMODRAFT_115145 [Selaginella moellendorffii]
Length = 716
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 176/681 (25%), Positives = 322/681 (47%), Gaps = 62/681 (9%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF--GGLLSCDSLNPVEGAQLQ 62
+V+S++ +I+ SR G AL + M+ G P + T + S P EG +
Sbjct: 31 DVISWSCLIAGNSRNGDSRAALSLLRSMLLHGVPPNKITLISAATAAAHSKIPAEGEFVH 90
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
L+ G + D + +ALL +YG++G LD + ++FE + ++ ++W ++++ K G +
Sbjct: 91 DLALQGG-WIRDLALSSALLNMYGKYGLLDRMEAIFEQIEERNPISWTAVIAANTKSGDL 149
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF---------- 172
+ LF ++ V + + + + S ++ +IH L+ ++GF
Sbjct: 150 PRALELFSAMLLDGVLPDAVALLTMANACSRMGSIQAARRIHRLIEESGFLLLLEAGSSP 209
Query: 173 ------DYELLVANSLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGALAESENFGK 225
L++AN++++MY +C A F + IRD VSWN++IGALA + K
Sbjct: 210 TGSFDRSRALMLANAIIDMYGECGSTSCARAAFDSMAMIRDDVSWNSMIGALARNGEAIK 269
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS----IHAKVIKNALECDVFVGS 281
A ++ RM +D + P + TF+ ++++ + +S+ +H ++ LECD + +
Sbjct: 270 ATVIFHRMLLDGIHPTKVTFLEILHAFSQSHSSLTAHRLIELVHGQIQSRGLECDALIAA 329
Query: 282 ALVDFYAKCDNLEGAHLCFSEISN-KNIVSWNALILGYASKSSPTSIFLLIELLQL-GYR 339
L+ A+ + LE A F + ++V W +I YA K P + L G+
Sbjct: 330 GLIPALARINRLEEATRIFHGARDCHDVVLWTTIIAAYAQKDRPREAMAFFRRMLLEGFL 389
Query: 340 PNEFTFSHVLRS--SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
N ++ VL S S+A +L C M S +S L
Sbjct: 390 ANGYSIVAVLESCCSIADGILLESC--------------AREMISRGRSSL--------- 426
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVL 456
P AV+ N + +++R G + ++ S + ER D VSWN +I A + + E L
Sbjct: 427 ----PMAVIVENSLLSMFSRCGSIEDASRIFSGMDERQDTVSWNSMIVALSQHDRPGEAL 482
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII-----SSDTFVCN 511
+++ M + P+ TFV+ L ACSK + + ++ ++ +I SDT V
Sbjct: 483 AIYRKMLLHGVRPEKITFVAALDACSKSSDASASANRAASLEICALILEAGHGSDTAVGA 542
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
++ ++GK G +++ + + +++ W+A++SA + A+ FREM G +
Sbjct: 543 AMVAIHGKHGEFDRAMECMDGIHKKDIFAWSAMVSAYAQHERCVEAIAFFREMVLDGVEA 602
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ V + VL+A H G + E F + +G+ P + HY CV+D+L R GHL EA +
Sbjct: 603 NDVIFVTVLSALGHAGSIEECCRYFGGLEVEFGMRPSLPHYGCVIDMLSRAGHLAEAVSV 662
Query: 632 ITTMPFPPNALIWRTFLEGCQ 652
+ MP + + W + L GC+
Sbjct: 663 MEQMP-SQDRVTWMSVLGGCR 682
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/534 (23%), Positives = 251/534 (47%), Gaps = 59/534 (11%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR 134
+G AL+ +YG+ G L+E +++F+ R +++W+ +++ ++G + L ++
Sbjct: 1 MLGNALVNMYGKCGTLEEALNLFQATAHRWDVISWSCLIAGNSRNGDSRAALSLLRSMLL 60
Query: 135 SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
V + + + ++ + GE +H L ++ G+ +L ++++L+NMY + +
Sbjct: 61 HGVPPNKITLISAATAAAHSKIPAEGEFVHDLALQGGWIRDLALSSALLNMYGKYGLLDR 120
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
E +F+ +E R+ +SW +I A +S + +ALEL+ M +D V P+ + + N+C+
Sbjct: 121 MEAIFEQIEERNPISWTAVIAANTKSGDLPRALELFSAMLLDGVLPDAVALLTMANACSR 180
Query: 255 LQNSILGKSIHAKVIKNA----LECD------------VFVGSALVDFYAKCDNLEGAHL 298
+ + + IH + ++ LE + + +A++D Y +C + A
Sbjct: 181 MGSIQAARRIHRLIEESGFLLLLEAGSSPTGSFDRSRALMLANAIIDMYGECGSTSCARA 240
Query: 299 CFSEISN-KNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS-SLAF 355
F ++ ++ VSWN++I A ++ + L G P + TF +L + S +
Sbjct: 241 AFDSMAMIRDDVSWNSMIGALARNGEAIKATVIFHRMLLDGIHPTKVTFLEILHAFSQSH 300
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L H LI E V G + + GL DAL I ++PA
Sbjct: 301 SSLTAHRLI--------ELVHGQIQS----RGLECDAL-------IAAGLIPA------L 335
Query: 416 NRTGQYNETVKLL-SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
R + E ++ + D+V W +IAA A +E + F+ M + Y+
Sbjct: 336 ARINRLEEATRIFHGARDCHDVVLWTTIIAAYAQKDRPREAMAFFRRMLLEGFLANGYSI 395
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSD-------TFVCNMLIDMYGKCGSIGSSV 527
V++L +C C++A G L + E+IS V N L+ M+ +CGSI +
Sbjct: 396 VAVLESC---CSIADGILLESCAR--EMISRGRSSLPMAVIVENSLLSMFSRCGSIEDAS 450
Query: 528 KIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
+IF+ M +R + ++W ++I AL + AL +R+M G +P+++ +A L
Sbjct: 451 RIFSGMDERQDTVSWNSMIVALSQHDRPGEALAIYRKMLLHGVRPEKITFVAAL 504
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/617 (20%), Positives = 268/617 (43%), Gaps = 72/617 (11%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ- 60
+RN +S+ ++I+A ++ G + AL +F M+ G P + +C + ++ A+
Sbjct: 130 ERNPISWTAVIAANTKSGDLPRALELFSAMLLDGVLPDAVALLTMANACSRMGSIQAARR 189
Query: 61 -------------LQASVLKNGLF--CADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-K 104
L+A G F + A++ +YG G + F+ M +
Sbjct: 190 IHRLIEESGFLLLLEAGSSPTGSFDRSRALMLANAIIDMYGECGSTSCARAAFDSMAMIR 249
Query: 105 SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL----EFG 160
V+WNS++ ++G +F ++ + T+ +F+ ++H S
Sbjct: 250 DDVSWNSMIGALARNGEAIKATVIFHRMLLDGIHPTKVTFLEILHAFSQSHSSLTAHRLI 309
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAE 219
E +HG + G + + L+A L+ + + A ++F + DVV W TII A A+
Sbjct: 310 ELVHGQIQSRGLECDALIAAGLIPALARINRLEEATRIFHGARDCHDVVLWTTIIAAYAQ 369
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI---KNALECD 276
+ +A+ + RM ++ N + V V+ SC + + IL +S ++I +++L
Sbjct: 370 KDRPREAMAFFRRMLLEGFLANGYSIVAVLESCCSIADGILLESCAREMISRGRSSLPMA 429
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNK-NIVSWNALILGYASKSSP-TSIFLLIELL 334
V V ++L+ +++C ++E A FS + + + VSWN++I+ + P ++ + ++L
Sbjct: 430 VIVENSLLSMFSRCGSIEDASRIFSGMDERQDTVSWNSMIVALSQHDRPGEALAIYRKML 489
Query: 335 QLGYRPNEFTFSHVL----------RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
G RP + TF L S+ L++ LI+ G+ + +G+ M +
Sbjct: 490 LHGVRPEKITFVAALDACSKSSDASASANRAASLEICALILEAGH-GSDTAVGAAMVA-- 546
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
I+ + G+++ ++ + + + DI +W+ +++
Sbjct: 547 -----------------------------IHGKHGEFDRAMECMDGIHKKDIFAWSAMVS 577
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
A A + E + F+ M + ++ FV++LSA ++ G ++ +
Sbjct: 578 AYAQHERCVEAIAFFREMVLDGVEANDVIFVTVLSALGHAGSIEECCRYFGGLEVEFGMR 637
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
+IDM + G + +V + +M ++ +TW +++ L G Q+ + R +
Sbjct: 638 PSLPHYGCVIDMLSRAGHLAEAVSVMEQMPSQDRVTWMSVLGGCRLYGDPQQGNKMARTL 697
Query: 565 EFLGFKPDRVALIAVLT 581
+G PD + LT
Sbjct: 698 --IGSNPDNASAYVALT 712
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 212/484 (43%), Gaps = 27/484 (5%)
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRMSV 235
++ N+LVNMY +C + A +F+ R DV+SW+ +I + + + AL L M +
Sbjct: 1 MLGNALVNMYGKCGTLEEALNLFQATAHRWDVISWSCLIAGNSRNGDSRAALSLLRSMLL 60
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V PN+ T + + A + G+ +H ++ D+ + SAL++ Y K L+
Sbjct: 61 HGVPPNKITLISAATAAAHSKIPAEGEFVHDLALQGGWIRDLALSSALLNMYGKYGLLDR 120
Query: 296 AHLCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
F +I +N +SW A+I S P ++ L +L G P+ A
Sbjct: 121 MEAIFEQIEERNPISWTAVIAANTKSGDLPRALELFSAMLLDGVLPD------------A 168
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
LL + RMG + L+ L+ + + + RA++ AN I +
Sbjct: 169 VALLTMANACSRMGSIQAARRIHRLIEESGFLLLLEAGSSPTGSFDRSRALMLANAIIDM 228
Query: 415 YNRTGQYNETVKLLSQLER-PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
Y G + + D VSWN +I A A NG+ + +F M I+P T
Sbjct: 229 YGECGSTSCARAAFDSMAMIRDDVSWNSMIGALARNGEAIKATVIFHRMLLDGIHPTKVT 288
Query: 474 FVSLLSACSK----LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
F+ +L A S+ L L +HG I ++ + D + LI + + + +I
Sbjct: 289 FLEILHAFSQSHSSLTAHRLIELVHGQI-QSRGLECDALIAAGLIPALARINRLEEATRI 347
Query: 530 FNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC--RHG 586
F+ D +V+ WT +I+A + A+ FR M GF + +++AVL +C
Sbjct: 348 FHGARDCHDVVLWTTIIAAYAQKDRPREAMAFFRRMLLEGFLANGYSIVAVLESCCSIAD 407
Query: 587 GLVRE--GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
G++ E E+ R S + ++ + ++ + R G +++A +I + M + + W
Sbjct: 408 GILLESCAREMISRGRSSLPMAVIVE--NSLLSMFSRCGSIEDASRIFSGMDERQDTVSW 465
Query: 645 RTFL 648
+ +
Sbjct: 466 NSMI 469
>gi|297725471|ref|NP_001175099.1| Os07g0203900 [Oryza sativa Japonica Group]
gi|255677594|dbj|BAH93827.1| Os07g0203900 [Oryza sativa Japonica Group]
Length = 721
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 155/485 (31%), Positives = 245/485 (50%), Gaps = 43/485 (8%)
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L +L+ Y + + A+ +F + R V+WNT+I A S G A+ + RM+
Sbjct: 49 LFATTALLAFYCRSRRLPEAQHLFDQMPARTAVTWNTLIHGHARSAAPGLAVAAFARMAR 108
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V P ++ V+ +C L+++ G ++H+ + + V VG+ALVD YAKC +L
Sbjct: 109 AGVSPTASSVSSVLVACVRLEDAAAGATLHSVGLMHGFCASVVVGTALVDMYAKCHHLGA 168
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLA 354
A F E+ KN+ ++ AL+ G+ P LL+ E+ + G PN T+S +L S +
Sbjct: 169 AQQVFREMEEKNVATFTALVAGFVLSRRPHDAMLLVREMERSGVAPNLMTYSSLLSSFAS 228
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ + Q+HC +++ G E+ ++VL +L+T Y+K G++ +
Sbjct: 229 PEDIDHGKQVHCAVLKKGLEHDQFVLSALVTMYSKCGILEN------------------- 269
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
VK+ + D VS+N VI+ + G KE + F MR D
Sbjct: 270 -------------FVKVQMSVSCQDQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMD 316
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV--CNMLIDMYGKCGSIGSSVK 528
+TF S+L A +L G +H LI K I D+ V N LI MY + G+IG S
Sbjct: 317 VFTFASVLKAIGSSSSLLEGRQVHTLILK---IGYDSVVDVQNSLISMYARHGAIGESNG 373
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F M N+++W +L+S +G + +E F +M L +PD + ++VLTAC H GL
Sbjct: 374 VFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGL 433
Query: 589 VREGMELFERM-NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
V +G+E F M ++ Y V +HY C+VDLL R G+L EAE +I MP P A ++R
Sbjct: 434 VDKGLEYFNLMKDKGYLVGARTEHYACMVDLLGRAGYLNEAEYLINGMPIKPGASVYRAL 493
Query: 648 LEGCQ 652
L CQ
Sbjct: 494 LSACQ 498
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 246/493 (49%), Gaps = 39/493 (7%)
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K G ++ F TALL Y R L E +F+ MP ++ VTWN+++ + +
Sbjct: 41 KLGFLASNLFATTALLAFYCRSRRLPEAQHLFDQMPARTAVTWNTLIHGHARSAAPGLAV 100
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
F + R+ V+ T SS V+ +D G +H + + +GF ++V +LV+MY
Sbjct: 101 AAFARMARAGVSPTASSVSSVLVACVRLEDAAAGATLHSVGLMHGFCASVVVGTALVDMY 160
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+C + +A+++F+++E ++V ++ ++ S A+ L M V PN T+
Sbjct: 161 AKCHHLGAAQQVFREMEEKNVATFTALVAGFVLSRRPHDAMLLVREMERSGVAPNLMTYS 220
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
+++S A ++ GK +H V+K LE D FV SALV Y+KC LE +S +
Sbjct: 221 SLLSSFASPEDIDHGKQVHCAVLKKGLEHDQFVLSALVTMYSKCGILENFVKVQMSVSCQ 280
Query: 307 NIVSWNALILGYASKSSPTSIFL-LIELLQLGYRPNEFTFSHVLR----SSLAFQLLQLH 361
+ VS+N++I G + F +E+ + G + FTF+ VL+ SS + Q+H
Sbjct: 281 DQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASVLKAIGSSSSLLEGRQVH 340
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
LI+++GY++ V SL++ YA+ G I
Sbjct: 341 TLILKIGYDSVVDVQNSLISMYARHGAI-------------------------------- 368
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
E+ + +E P++VSWN +++ CA +G KEV+E+F+ MR + PD+ TF+S+L+AC
Sbjct: 369 GESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHVQPDHITFLSVLTAC 428
Query: 482 SKLCNLALGSSLHGLIK-KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVI 539
S + + G L+K K ++ + T ++D+ G+ G + + + N M +
Sbjct: 429 SHVGLVDKGLEYFNLMKDKGYLVGARTEHYACMVDLLGRAGYLNEAEYLINGMPIKPGAS 488
Query: 540 TWTALISALGLNG 552
+ AL+SA ++G
Sbjct: 489 VYRALLSACQIHG 501
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 131/255 (51%), Gaps = 3/255 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
M ++NV +F ++++ + DA+ + M G P T+ LLS + G
Sbjct: 176 MEEKNVATFTALVAGFVLSRRPHDAMLLVREMERSGVAPNLMTYSSLLSSFASPEDIDHG 235
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +VLK GL D FV +AL+ +Y + G L+ V V + + V++NS++S
Sbjct: 236 KQVHCAVLKKGLE-HDQFVLSALVTMYSKCGILENFVKVQMSVSCQDQVSFNSVISGLSC 294
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ F E+ R + +F V+ + + L G Q+H L++K G+D + V
Sbjct: 295 LGRGKEAFQHFLEMRRHGTDMDVFTFASVLKAIGSSSSLLEGRQVHTLILKIGYDSVVDV 354
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY + I + +F +E ++VSWN+++ A+ + + +E++ +M V
Sbjct: 355 QNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGHGKEVVEMFEQMRRLHV 414
Query: 239 FPNQTTFVYVINSCA 253
P+ TF+ V+ +C+
Sbjct: 415 QPDHITFLSVLTACS 429
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 145/300 (48%), Gaps = 23/300 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQL 61
++ VSFNS+IS S G ++A + FL M G + FTF +L S + +EG Q+
Sbjct: 280 QDQVSFNSVISGLSCLGRGKEAFQHFLEMRRHGTDMDVFTFASVLKAIGSSSSLLEGRQV 339
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+LK G + + V +L+ +Y RHG + E VF M +LV+WNS++S +HG
Sbjct: 340 HTLILKIG-YDSVVDVQNSLISMYARHGAIGESNGVFISMEAPNLVSWNSLMSGCAQHGH 398
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ + +F ++ R V +F+ V+ S+ ++ G + L+ G+ L+ A +
Sbjct: 399 GKEVVEMFEQMRRLHVQPDHITFLSVLTACSHVGLVDKGLEYFNLMKDKGY---LVGART 455
Query: 182 -----LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+V++ + + AE + + I+ S + AL + LE+ +R+S
Sbjct: 456 EHYACMVDLLGRAGYLNEAEYLINGMPIKPGAS---VYRALLSACQIHGNLEIVIRVSKR 512
Query: 237 IVFPN---QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
++ N + V + N+ AG G+ +A I+ A+ + G +L DF K N+
Sbjct: 513 LIELNPHDSSVHVQLSNAFAG-----DGRWGNAAEIREAMS-EYMSGGSLYDFLHKQHNV 566
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 154/496 (31%), Positives = 249/496 (50%), Gaps = 33/496 (6%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYF--QCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+Q H L+++ + L ++ L++ + A K+F ++ D NT+I A
Sbjct: 28 KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
S+N +A+ LY M V + T+ +V+ +CA L LG+ H +V+KN D+F
Sbjct: 88 RSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLF 147
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQL- 336
V +AL+ FY C + A F E + +++V+WN +I + +K F LL E+ +L
Sbjct: 148 VINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLD 207
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
RP+E T ++ + L+ G + SY+K
Sbjct: 208 NLRPDEVTMVSLVPACAQLGNLER----------------GKFLHSYSKE---------- 241
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
L + + N I +Y + ++ +++ D++SW +++ A +G ++E L
Sbjct: 242 --LGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEAL 299
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
LF+ M+ +I D T V +LSAC++ L G +H LI K EI + D + L+DM
Sbjct: 300 ALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEI-NCDLVLETALVDM 358
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y KCGSI ++++F M RNV TW ALI L ++G + A+ F +ME PD V
Sbjct: 359 YAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTF 418
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
IA+L AC H GLV EG+ +F+ M + +EP M+HY CVVDLL R + +A I MP
Sbjct: 419 IALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMP 478
Query: 637 FPPNALIWRTFLEGCQ 652
N+++W T L C+
Sbjct: 479 IKANSVLWATLLGACR 494
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 217/432 (50%), Gaps = 20/432 (4%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQASVLK 67
N++I Y+R +A+ ++ +M+ RG +T+ +L+ C L V+ G + VLK
Sbjct: 80 NTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLK 139
Query: 68 NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMF 127
NG F +D FV AL+ Y G VF++ + +VTWN +++ G E
Sbjct: 140 NG-FGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFD 198
Query: 128 LFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
L E+ + + E + V ++ + +LE G+ +H + G D L V N++++MY
Sbjct: 199 LLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMY 258
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+C I SA+++F + +DV+SW +++ LA+S F +AL L+ +M ++ + ++ T V
Sbjct: 259 CKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLV 318
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
V+++CA GK IH + K + CD+ + +ALVD YAKC +++ A F + +
Sbjct: 319 GVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVR 378
Query: 307 NIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTF-------SH--VLRSSLA-F 355
N+ +WNALI G A +I L ++ P++ TF SH ++ LA F
Sbjct: 379 NVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMF 438
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
Q ++ + I E+Y G ++ ++ + DALAF+ + I V + G
Sbjct: 439 QAMK-NKFQIEPRMEHY----GCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGAC 493
Query: 416 NRTGQYNETVKL 427
G ++ K+
Sbjct: 494 RSGGHFDLAEKI 505
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/507 (23%), Positives = 228/507 (44%), Gaps = 44/507 (8%)
Query: 50 CDSLNPVEGAQ---LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
C S++ + A L+ +L N LF + AL G L+ +F M
Sbjct: 21 CTSISKTKQAHALLLRTHLLHNPLFSSKLISFLAL----SHSGDLNYARKLFTQMQNPDP 76
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
N+++ + + + + L+ +V V + ++ V+ + ++ G + H
Sbjct: 77 FICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCE 136
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
V+KNGF +L V N+L+ Y C A +F + +RDVV+WN +I A KA
Sbjct: 137 VLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKA 196
Query: 227 LELYLRMS-VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
+L M+ +D + P++ T V ++ +CA L N GK +H+ + L+ ++ V +A++D
Sbjct: 197 FDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILD 256
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTF 345
Y KCD++E A F+ I K+++SW +++ G A GY
Sbjct: 257 MYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKS---------------GY------- 294
Query: 346 SHVLRSSLA-FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL---AFVTALNI 401
+ +LA FQ +QL+ + E E L ++++ A++G + + I
Sbjct: 295 ---FQEALALFQKMQLNKI------ELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEI 345
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
+V + +Y + G + +++ ++ ++ +WN +I A +G ++ + LF
Sbjct: 346 NCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQ 405
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M ++ PD+ TF++LL ACS + G ++ +K I ++D+ +
Sbjct: 406 MEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRAR 465
Query: 522 SIGSSVKIFNEMTDR-NVITWTALISA 547
+ ++ M + N + W L+ A
Sbjct: 466 KVDDALAFIENMPIKANSVLWATLLGA 492
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 120/236 (50%), Gaps = 7/236 (2%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGAQ 60
+++V+S+ S++S ++ GY ++AL +F M E + T G+LS C + +G
Sbjct: 276 EKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKY 335
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ + K + C D + TAL+ +Y + G +D + VF M +++ TWN+++ HG
Sbjct: 336 IHLLIDKFEINC-DLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHG 394
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
ED + LF ++ ++ + +F+ ++ S+ ++ G + +KN F E + +
Sbjct: 395 HGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQ-AMKNKFQIEPRMEH 453
Query: 181 --SLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRM 233
+V++ + + A +++ I+ + V W T++GA +F A ++ R+
Sbjct: 454 YGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRV 509
>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1005
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 172/661 (26%), Positives = 315/661 (47%), Gaps = 45/661 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M DR ++N++I AY G AL ++ M G ++F LL +C L + G
Sbjct: 122 MRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLRDIRSG 181
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIVSIFG 117
+L ++K G F + F+ AL+ +Y + L +F+ K V WNSI+S +
Sbjct: 182 TELHCMLVKLG-FNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILSSYS 240
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + + LF E+ + A + V + + G++IH V+K+ +E+
Sbjct: 241 TSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVY 300
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+L+ MY +C + A ++ + + DVV+WN++I ++ + +AL+ + M
Sbjct: 301 VCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAG 360
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P++ + VI + L N + G +HA VIK+ + ++ VG+ L+D Y+KC+
Sbjct: 361 HKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMG 420
Query: 298 LCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + K+++SW +I GYA + ++ L ++ + +E +LR+ +
Sbjct: 421 RAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLK 480
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ ++HC I+R GLI V N +
Sbjct: 481 SMLIVKEIHCHILR-------------------KGLID--------------TVIQNELV 507
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + ++ ++ D+VSW +I++ A NG+ E +ELF+ M + D+
Sbjct: 508 DVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSV 567
Query: 473 TFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ +LSA + L L G +HG L++K + V ++DMY CG + S+ +F+
Sbjct: 568 ALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVA--VVDMYACCGDLQSAKAVFD 625
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ + ++ +T++I+A G++G + ++E F +M PD ++ +A+L AC H GL+ E
Sbjct: 626 RIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDE 685
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G + M Y +EP +HY C+VD+L R + EA + + M P +W L C
Sbjct: 686 GRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTTEVWCALLAAC 745
Query: 652 Q 652
+
Sbjct: 746 R 746
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 149/557 (26%), Positives = 276/557 (49%), Gaps = 42/557 (7%)
Query: 81 LLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALT 140
LL L G+ L + VF++M ++ WN+++ + +G +F++ + V L
Sbjct: 103 LLELCGKSRALSQE-KVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLD 161
Query: 141 ESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
SF ++ +D+ G ++H +++K GF+ + N+LV+MY + + +A+++F
Sbjct: 162 LYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFD 221
Query: 201 -DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
E D V WN+I+ + + S + L+L+ M + N T V + +C G +
Sbjct: 222 ASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAK 281
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
LGK IHA V+K+ +V+V +AL+ YA+C + A ++N ++V+WN+LI GY
Sbjct: 282 LGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYV 341
Query: 320 SK-SSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEY 374
++ +++ G++P+E + + V+ R S ++LH +I+ G+++
Sbjct: 342 QNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLL 401
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
V +L+ Y+K L + RA + +
Sbjct: 402 VGNTLIDMYSKCNL---------TCYMGRAFL-----------------------MMHEK 429
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
D++SW +IA A N + E L+LF+ + R+ D S+L ACS L ++ + +H
Sbjct: 430 DLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIH 489
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
I + +I DT + N L+D+YGKC ++G + ++F + ++V++WT++IS+ LNG
Sbjct: 490 CHILRKGLI--DTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNE 547
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHC 614
A+E FR M G D VAL+ +L+A +++G E+ + R G E
Sbjct: 548 NEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRK-GFCLEGSIAVA 606
Query: 615 VVDLLVRYGHLKEAEKI 631
VVD+ G L+ A+ +
Sbjct: 607 VVDMYACCGDLQSAKAV 623
>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 692
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 170/616 (27%), Positives = 283/616 (45%), Gaps = 45/616 (7%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L SC +L E +L A++L G A + L+ Y R G +SV + MP ++
Sbjct: 49 LRSCPTL--AEARRLHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDGMPMRNS 106
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRS-EVALTESSFVGVIHGLSN----EQDLEFGE 161
WN+ + G + + + +VR VA ++ VI + EQ E
Sbjct: 107 FAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVRE 166
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
+ V++ + V +LV+M+ +C + A +F+ + RD+ +W +IG +
Sbjct: 167 NVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAG 226
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
++ A+ L+ RM + + VI +C + G +H ++ + D V +
Sbjct: 227 DWLDAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSN 286
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRP 340
ALVD Y KC L A F I K++VSW+ LI GY+ S+ L E++ G +P
Sbjct: 287 ALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKP 346
Query: 341 NEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
N T + +L S +L ++H +R G++ ++ LGS AF+
Sbjct: 347 NSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKF-LGS---------------AFI 390
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
Y+R G E +L + + D+V WN ++A A NG+ L
Sbjct: 391 D----------------FYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDSAL 434
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
F+ ++ PD+ T VS+L C+ L G LH + + +SS V N LIDM
Sbjct: 435 CAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVR-HYMSSVCSVSNALIDM 493
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y KC + +IF +TDR+ T+ LIS+ G +G A+ F M+ G PD+V
Sbjct: 494 YCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDKVTF 553
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+A+L++C H GL+ +G+ ++ M + Y + P +HY CVVDL R G L +A K ++++
Sbjct: 554 VALLSSCSHAGLIEKGLHFYDIMLQDYNISPGKEHYSCVVDLYSRSGKLDDAWKFVSSLQ 613
Query: 637 FPPNALIWRTFLEGCQ 652
+ L C+
Sbjct: 614 DEAEIDVLGCLLGACR 629
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/548 (25%), Positives = 257/548 (46%), Gaps = 39/548 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLL-SCDSLNPVEG 58
MP RN ++N+ I G +AL + M+ G FT+ ++ +C +L VE
Sbjct: 101 MPMRNSFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQ 160
Query: 59 AQL-----QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
++ +A V++ G+ FV AL+ ++ + GCL E SVFE M + L W +++
Sbjct: 161 GRMVRENVEADVVR-GVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMI 219
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVG-VIHGLSNEQDLEFGEQIHGLVIKNGF 172
G D M LF + RSE L +S + VI ++L G +HG ++ G
Sbjct: 220 GGAVHAGDWLDAMSLFSRM-RSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGV 278
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
+ V+N+LV+MY +C + A+++F + +DVVSW+T+I +++ ++ L+
Sbjct: 279 GDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTE 338
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M + PN T ++ S + ++ GK IH ++N + F+GSA +DFY++ +
Sbjct: 339 MVTAGLKPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGS 398
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRS 351
+ A + + +++V WN+++ GYA + S LQ +G+RP+ T VL
Sbjct: 399 IREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVL-- 456
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ H +I+ G E + YV+ M+S +N +
Sbjct: 457 ----PVCNHHSRLIQ-GKELHAYVVRHYMSSVCSV---------------------SNAL 490
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y + + ++ + D ++N +I++ +G E + LF M+ I PD
Sbjct: 491 IDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDK 550
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TFV+LLS+CS + G + ++ + IS + ++D+Y + G + + K +
Sbjct: 551 VTFVALLSSCSHAGLIEKGLHFYDIMLQDYNISPGKEHYSCVVDLYSRSGKLDDAWKFVS 610
Query: 532 EMTDRNVI 539
+ D I
Sbjct: 611 SLQDEAEI 618
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 183/384 (47%), Gaps = 30/384 (7%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE----GA 59
++VVS++++I+ YS+ G ++ +F M+ G +P T +L SL+ ++ G
Sbjct: 311 KDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILP--SLSEMKLFRHGK 368
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ L+NG F F+G+A + Y R G + E V E MP++ LV WNS+V+ + +
Sbjct: 369 EIHGFSLRNG-FDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVN 427
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + + F L + + V V+ ++ L G+++H V+++ V+
Sbjct: 428 GNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVS 487
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L++MY +C + +++F+ V RD ++NT+I + + + +A+ L+ M D +
Sbjct: 488 NALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIA 547
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE-CDVFVG-----------SALVDFY 287
P++ TFV +++SC+ HA +I+ L D+ + S +VD Y
Sbjct: 548 PDKVTFVALLSSCS-----------HAGLIEKGLHFYDIMLQDYNISPGKEHYSCVVDLY 596
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSH 347
++ L+ A S + ++ + +LG + I L+ P++ +
Sbjct: 597 SRSGKLDDAWKFVSSLQDEAEIDVLGCLLGACRVHNRMDIAELVAKRIFEQNPSDPGYHI 656
Query: 348 VLRSSLAFQLLQLHCLIIRMGYEN 371
+L + A + H IR EN
Sbjct: 657 LLSNIYANAGMWSHVTRIRTMIEN 680
>gi|297843412|ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335429|gb|EFH65846.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 558
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 245/506 (48%), Gaps = 31/506 (6%)
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI--RDVV 208
LS + L +Q+H VI +GF E+++ +SL N Y Q + A F + R+
Sbjct: 14 LSQTKTLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCWKRNRH 73
Query: 209 SWNTIIGALAESEN--FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
SWNTI+ ++S++ + L LY RM + V+ I +C GL G IH
Sbjct: 74 SWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGMLIHG 133
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS 326
+KN L+ D +V +LV+ YA+ +E A F E+ +N V W L+ GY S +
Sbjct: 134 LAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKYSKDSE 193
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
+F L L++ + LA L L CL+ G S K
Sbjct: 194 VFRLFYLMR--------------DTGLALDALTLICLVKACGN-----------VSAGKE 228
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
G L+ + + A+II +Y + + KL ++V W +I+
Sbjct: 229 GKCVHGLSIRRSFIDQSGYLEASII-DMYVKCRLLDNARKLFETSVERNVVMWTTLISGF 287
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
A E ++LF+ M I P++ T ++L +CS L +L G S+HG + + I D
Sbjct: 288 AKCERAVEAIDLFRQMLGESILPNHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGI-EMD 346
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
ID Y +CG+I + K+F+ M RNVI+W+++I+A G+NG + AL+ F M+
Sbjct: 347 AVNFTSFIDTYARCGNIQMARKVFDMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKS 406
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
P+ V +++L+AC H G V+EG + FE M R YG+ PE +HY C+VDLL R G +
Sbjct: 407 QNLVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGLVPEEEHYACMVDLLGRAGEIG 466
Query: 627 EAEKIITTMPFPPNALIWRTFLEGCQ 652
EA+ I MP P A W L C+
Sbjct: 467 EAKSFIDNMPVKPMASAWGALLSACR 492
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 213/451 (47%), Gaps = 37/451 (8%)
Query: 4 RNVVSFNSIISAYSRCG--YVEDALRMFLYMINR--GFEPTQFTFGGLLSCDSLNPVE-G 58
RN S+N+I+S YS+ Y D L ++ M G + F + +C L +E G
Sbjct: 70 RNRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFA-IKACVGLGLLENG 128
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +KNGL D +V +L+ +Y + G ++ VF++MP ++ V W ++ + K
Sbjct: 129 MLIHGLAMKNGLD-KDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLK 187
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF-DYELL 177
+ + LF + + +AL + + ++ N + G+ +HGL I+ F D
Sbjct: 188 YSKDSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGY 247
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ S+++MY +C + +A K+F+ R+VV W T+I A+ E +A++L+ +M +
Sbjct: 248 LEASIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGES 307
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ PN T ++ SC+ L + GKS+H +I+N +E D ++ +D YA+C N++ A
Sbjct: 308 ILPNHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMAR 367
Query: 298 LCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F + +N++SW+++I + ++ + PN TF +L +
Sbjct: 368 KVFDMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSAC---- 423
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
H ++ G++ +E S+ Y GL+ + + ++ +
Sbjct: 424 ---SHSGNVKEGWKQFE----SMTRDY---GLVPEEEHYACMVD-------------LLG 460
Query: 417 RTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
R G+ E + + +P +W +++AC
Sbjct: 461 RAGEIGEAKSFIDNMPVKPMASAWGALLSAC 491
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 124/255 (48%), Gaps = 2/255 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNP-VEG 58
MP RN V + ++ Y + + R+F M + G T L+ +C +++ EG
Sbjct: 170 MPVRNSVLWGVLMKGYLKYSKDSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEG 229
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ ++ ++ +++ +Y + LD +FE +++V W +++S F K
Sbjct: 230 KCVHGLSIRRSFIDQSGYLEASIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAK 289
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + LF +++ + + ++ S+ L G+ +HG +I+NG + + +
Sbjct: 290 CERAVEAIDLFRQMLGESILPNHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVN 349
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
S ++ Y +C I A K+F + R+V+SW+++I A + F +AL+ + M +
Sbjct: 350 FTSFIDTYARCGNIQMARKVFDMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNL 409
Query: 239 FPNQTTFVYVINSCA 253
PN TFV ++++C+
Sbjct: 410 VPNSVTFVSLLSACS 424
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 4/222 (1%)
Query: 438 SWNIVIAACAHNGD--YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
SWN +++ + + Y +VL L+ MR D++ V + AC L L G +HG
Sbjct: 74 SWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGMLIHG 133
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
L K + D +V L++MY + G++ S+ K+F+EM RN + W L+
Sbjct: 134 LAMKNGL-DKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKYSKDS 192
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
F M G D + LI ++ AC + +EG + R ++ +
Sbjct: 193 EVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYLEASI 252
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIA 657
+D+ V+ L A K+ T N ++W T + G +C A
Sbjct: 253 IDMYVKCRLLDNARKLFET-SVERNVVMWTTLISGFAKCERA 293
>gi|297812081|ref|XP_002873924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319761|gb|EFH50183.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 939
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 161/588 (27%), Positives = 282/588 (47%), Gaps = 73/588 (12%)
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
E + E + V + ++ D+ G QIHG V+K+G D + NS++NMY +C + A
Sbjct: 290 ESSNIERALVSALGSCASSNDVTCGRQIHGRVLKSGHDSNGFICNSVLNMYAKCRLLVDA 349
Query: 196 E-------------------------------KMFKDVEIRDVVSWNTIIGALAESENFG 224
E K+F + R VS+ T+I A++ +
Sbjct: 350 ESVFRAHAKLDSASFNIMVDGYARSRRLGDALKLFDVMPERSCVSYTTLIKGYAQNNQWS 409
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
+A+EL+ M + N+ T VI++C+ L K +H+ IK L+ VF + L+
Sbjct: 410 EAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCKMLHSLAIKLNLDDRVFASTNLL 469
Query: 285 DFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK---SSPTSIFLLI---------- 331
Y C L+ A F E+ +N+V+WN ++ GY+ +F I
Sbjct: 470 LMYCICSCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAKELFDQITEKDIVSWGT 529
Query: 332 -------------------ELLQLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMG 368
E+L+ G +P+E +L RS + + LQLH I++MG
Sbjct: 530 MIDGCLRKNQLDEALVYYTEMLRRGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKMG 589
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
++ Y+++ +++ YA S + AL +++ + N + + + G + ++
Sbjct: 590 FDCYDFLQATIIHFYAVSNNLKLALQQFE-VSVKDHIASRNALIAGFVKNGMVEQAREVF 648
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCNL 487
Q DI SWN +++ A + + L LF+ M ++++ PD T VS+ SA S L +L
Sbjct: 649 DQTRDKDIFSWNAMMSGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSL 708
Query: 488 ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD---RNVITWTAL 544
G H + ++ I +D + +I+MY KCGSI +++ IF++ + + W A+
Sbjct: 709 EEGKRAHEYLNRSSIPPNDNLIA-AIINMYAKCGSIETALNIFHQTKNIFSSTISPWNAI 767
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I +G A+ AL+ + +++ L KP+ + + VL+AC H GLV G FE M +G
Sbjct: 768 ICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHG 827
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+EP++ HY C+VDLL + G L+EA+++I MP + +IW L +
Sbjct: 828 IEPDIKHYGCMVDLLGKSGKLEEAKEMIKNMPVKADVMIWGMLLSASR 875
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 140/626 (22%), Positives = 258/626 (41%), Gaps = 143/626 (22%)
Query: 40 TQFTFGG------------LLSCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYG 86
T F F G L SC S N V G Q+ VLK+G ++ F+ ++L +Y
Sbjct: 283 THFDFSGESSNIERALVSALGSCASSNDVTCGRQIHGRVLKSG-HDSNGFICNSVLNMYA 341
Query: 87 R-------------HGCLD------------------EVVSVFEDMPRKSLVTWNSIVSI 115
+ H LD + + +F+ MP +S V++ +++
Sbjct: 342 KCRLLVDAESVFRAHAKLDSASFNIMVDGYARSRRLGDALKLFDVMPERSCVSYTTLIKG 401
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ ++ + M LF E+ + L E + VI S+ + + +H L IK D
Sbjct: 402 YAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCKMLHSLAIKLNLDDR 461
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS- 234
+ + +L+ MY C+ + A K+F ++ R++V+WN ++ +++ +A EL+ +++
Sbjct: 462 VFASTNLLLMYCICSCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAKELFDQITE 521
Query: 235 VDIVF------------------------------PNQTTFVYVINSCAGLQNSILGKSI 264
DIV P++ V ++++ A S G +
Sbjct: 522 KDIVSWGTMIDGCLRKNQLDEALVYYTEMLRRGMKPSEVMMVDLLSASARSVGSSKGLQL 581
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNL------------------------------- 293
H ++K +C F+ + ++ FYA +NL
Sbjct: 582 HGTIVKMGFDCYDFLQATIIHFYAVSNNLKLALQQFEVSVKDHIASRNALIAGFVKNGMV 641
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGY-RPNEFTFSHVLRS 351
E A F + +K+I SWNA++ GYA SP ++ L E++ +P+ T V +
Sbjct: 642 EQAREVFDQTRDKDIFSWNAMMSGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSA 701
Query: 352 SLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ L+ H + R + ++ +++ YAK G I TALNI
Sbjct: 702 ISSLGSLEEGKRAHEYLNRSSIPPNDNLIAAIINMYAKCGSIE------TALNI------ 749
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+++T + S P WN +I A +G K L+L+ +++ I
Sbjct: 750 -------------FHQTKNIFSSTISP----WNAIICGSATHGHAKLALDLYSDLQSLPI 792
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P++ TFV +LSAC + LG + +K I D ++D+ GK G + +
Sbjct: 793 KPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKSGKLEEAK 852
Query: 528 KIFNEMTDR-NVITWTALISALGLNG 552
++ M + +V+ W L+SA ++G
Sbjct: 853 EMIKNMPVKADVMIWGMLLSASRIHG 878
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 186/428 (43%), Gaps = 68/428 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP+R+ VS+ ++I Y++ +A+ +F M N G + T ++S C L +
Sbjct: 387 MPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDC 446
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ S+ F T LL +Y CL + +F++MP ++LVTWN +++ + K
Sbjct: 447 KMLHSLAIKLNLDDRVFASTNLLLMYCICSCLKDARKLFDEMPERNLVTWNVMLNGYSKA 506
Query: 120 GFVEDCMFLF-------------------------------CELVRSEVALTESSFVGVI 148
G +E LF E++R + +E V ++
Sbjct: 507 GLIEQAKELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRRGMKPSEVMMVDLL 566
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFD-YELLVA---------------------------- 179
+ G Q+HG ++K GFD Y+ L A
Sbjct: 567 SASARSVGSSKGLQLHGTIVKMGFDCYDFLQATIIHFYAVSNNLKLALQQFEVSVKDHIA 626
Query: 180 --NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVD 236
N+L+ + + + A ++F +D+ SWN ++ A+S + AL L+ M S
Sbjct: 627 SRNALIAGFVKNGMVEQAREVFDQTRDKDIFSWNAMMSGYAQSLSPQLALHLFREMISSS 686
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+ T V V ++ + L + GK H + ++++ + + +A+++ YAKC ++E A
Sbjct: 687 QVKPDAITMVSVFSAISSLGSLEEGKRAHEYLNRSSIPPNDNLIAAIINMYAKCGSIETA 746
Query: 297 HLCFSEISN---KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
F + N I WNA+I G A+ + ++ L +L L +PN TF VL +
Sbjct: 747 LNIFHQTKNIFSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSAC 806
Query: 353 LAFQLLQL 360
L++L
Sbjct: 807 CHAGLVEL 814
>gi|31193917|gb|AAP44752.1| putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
gi|108712239|gb|ABG00034.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 640
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 180/644 (27%), Positives = 302/644 (46%), Gaps = 55/644 (8%)
Query: 16 YSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL----NPVEGAQLQASVLKNGLF 71
++R G + AL +F ++ PT L+C +L + Q+ A + GL
Sbjct: 19 HARSGRHDAALTVFRRVL--AVHPTTAA-ADELACSALLRCCDARLAYQIHAQACRRGLV 75
Query: 72 CADAFVGTALLGLYGRHGC-----LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE--D 124
++ + +LL Y + ++F++M K V++ +++S + G
Sbjct: 76 ASNPVLACSLLAFYAAAASSPTAAIPPACNLFDEMAHKDAVSYTAMISALVRAGAAHWRQ 135
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ L+ ++++ T+ +F ++ ++ + G Q+H +++ G L++ +L++
Sbjct: 136 ALALYPCMLQAGAPPTQHTFAQLLSACASGRLHHQGTQLHAQLLRWGAGLNLVLKTALLH 195
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
MY C + A + DVV W II A S + AL+++ M+ V PN T
Sbjct: 196 MYCNCGNMGYAHTVLHSTPQTDVVLWTAIITGYARSGDLQSALQMFRSMTRAAVLPNAFT 255
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN--LEGAHLCFSE 302
+ +I++C+ + G+ IHA++ K LE D V +ALVD Y+K + L+ H F
Sbjct: 256 YAALISACSSFRALQPGRQIHARLFKFGLEHDTSVCNALVDLYSKSSSRLLDLLH-TFHA 314
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLR---SSLAF-QL 357
+ N+VSW ALI G A FL ++L G PN FT S +L+ SSLAF
Sbjct: 315 VDKPNVVSWTALIAGLACHGRDEEAFLAFSQMRLSGVLPNSFTVSTLLKGSSSSLAFLHA 374
Query: 358 LQLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
++H I++ +E+ + +G SL+ Y + + DA A T + A I +
Sbjct: 375 RKIHGYILKTSFESLDAAVGNSLVDVYVRFARMDDAWAVATTM------------AFIRD 422
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
R Y + L+Q+ G + LE+F M + D ++ S
Sbjct: 423 RF-TYTSLARGLNQM------------------GLQQRTLEMFVRMFHEDVDIDGFSIAS 463
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LS+ + L ++ G LH K + SSD V N LIDMY KC +G + +F +++
Sbjct: 464 FLSSAASLASIETGKQLHSCSVKLGL-SSDISVSNSLIDMYSKCKCMGDARSVFQSISEP 522
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
V++W AL+SAL N + AL F +M +G KPD + +L AC GLV G++ F
Sbjct: 523 KVVSWNALMSALVSNEYYNEALSAFEDMTLVGAKPDGITFSLMLFACNRSGLVDIGIKYF 582
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
M +GV P+ HY +D+L R G L EA I +P P+
Sbjct: 583 NSMGNLFGVLPQRSHYTLFLDMLGRSGRLTEAASTIDVIPIQPD 626
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 223/495 (45%), Gaps = 45/495 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCG--YVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV-- 56
M ++ VS+ ++ISA R G + AL ++ M+ G PTQ TF LLS + +
Sbjct: 110 MAHKDAVSYTAMISALVRAGAAHWRQALALYPCMLQAGAPPTQHTFAQLLSACASGRLHH 169
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G QL A +L+ G + + TALL +Y G + +V P+ +V W +I++ +
Sbjct: 170 QGTQLHAQLLRWGAGL-NLVLKTALLHMYCNCGNMGYAHTVLHSTPQTDVVLWTAIITGY 228
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ G ++ + +F + R+ V ++ +I S+ + L+ G QIH + K G +++
Sbjct: 229 ARSGDLQSALQMFRSMTRAAVLPNAFTYAALISACSSFRALQPGRQIHARLFKFGLEHDT 288
Query: 177 LVANSLVNMYFQCAG-IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V N+LV++Y + + + F V+ +VVSW +I LA +A + +M +
Sbjct: 289 SVCNALVDLYSKSSSRLLDLLHTFHAVDKPNVVSWTALIAGLACHGRDEEAFLAFSQMRL 348
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC-DVFVGSALVDFYAKCDNLE 294
V PN T ++ + + + IH ++K + E D VG++LVD Y + ++
Sbjct: 349 SGVLPNSFTVSTLLKGSSSSLAFLHARKIHGYILKTSFESLDAAVGNSLVDVYVRFARMD 408
Query: 295 GAHLCFSEISN-KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A + ++ ++ ++ +L G ++ + + + + F+ + L S+
Sbjct: 409 DAWAVATTMAFIRDRFTYTSLARGLNQMGLQQRTLEMFVRMFHEDVDIDGFSIASFLSSA 468
Query: 353 LAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ + QLH +++G + V SL+ Y+K + DA R+V
Sbjct: 469 ASLASIETGKQLHSCSVKLGLSSDISVSNSLIDMYSKCKCMGDA----------RSV--- 515
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+ P +VSWN +++A N Y E L F+ M
Sbjct: 516 -------------------FQSISEPKVVSWNALMSALVSNEYYNEALSAFEDMTLVGAK 556
Query: 469 PDNYTFVSLLSACSK 483
PD TF +L AC++
Sbjct: 557 PDGITFSLMLFACNR 571
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 159/370 (42%), Gaps = 63/370 (17%)
Query: 300 FSEISNKNIVSWNALILGYASKSSP---TSIFLLIELLQLGYRPNEFTFSHVLRS----S 352
F E+++K+ VS+ A+I + ++ L +LQ G P + TF+ +L +
Sbjct: 107 FDEMAHKDAVSYTAMISALVRAGAAHWRQALALYPCMLQAGAPPTQHTFAQLLSACASGR 166
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L Q QLH ++R G LN+ V +
Sbjct: 167 LHHQGTQLHAQLLRWG----------------------------AGLNL----VLKTALL 194
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y G +L + D+V W +I A +GD + L++F+ M A + P+ +
Sbjct: 195 HMYCNCGNMGYAHTVLHSTPQTDVVLWTAIITGYARSGDLQSALQMFRSMTRAAVLPNAF 254
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS-IGSSVKIFN 531
T+ +L+SACS L G +H + K + DT VCN L+D+Y K S + + F+
Sbjct: 255 TYAALISACSSFRALQPGRQIHARLFKFGL-EHDTSVCNALVDLYSKSSSRLLDLLHTFH 313
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR------- 584
+ NV++WTALI+ L +G + A F +M G P+ + +L
Sbjct: 314 AVDKPNVVSWTALIAGLACHGRDEEAFLAFSQMRLSGVLPNSFTVSTLLKGSSSSLAFLH 373
Query: 585 ----HGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
HG +++ FE ++ + G + +VD+ VR+ + +A + TTM F +
Sbjct: 374 ARKIHGYILKTS---FESLDAAVG--------NSLVDVYVRFARMDDAWAVATTMAFIRD 422
Query: 641 ALIWRTFLEG 650
+ + G
Sbjct: 423 RFTYTSLARG 432
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 258/517 (49%), Gaps = 8/517 (1%)
Query: 142 SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY-FQCAGIWSAEKMFK 200
S+F +SN L +++H +++ + + ++ Y + A +F
Sbjct: 12 STFSKSQRAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFN 71
Query: 201 DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
++ ++ WN +I L++S+ A+ Y M + + TF+++ SCA + +
Sbjct: 72 QIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQ 131
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
G+ + +K E +FV +AL+ Y L A F + +++VSWN++I GY
Sbjct: 132 GQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQ 191
Query: 321 KSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE----YV 375
+ + L E+ + R + T + ++ ++ +++ E+ Y+
Sbjct: 192 FNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYL 251
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
+L+ Y + G+I A + + +V N + Y + G KL +++ D
Sbjct: 252 GNTLIDMYGRRGMIDFAGRVFYQMK-EKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRD 310
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
++SW +I + + E ++LF+ M + + PD T + LSAC+ L +L G ++H
Sbjct: 311 VISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHD 370
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
I+K +I SD FV N LIDMY KCG + ++++FN+M R+ ++WT++IS L +NGFA+
Sbjct: 371 YIRKHDI-KSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAE 429
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
AL F +M G P + VL AC H GLV +G+E F+ M +Y + PEM HY CV
Sbjct: 430 SALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCV 489
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
VDLL R G+L A I MP P+ +IWR L C+
Sbjct: 490 VDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACK 526
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 215/470 (45%), Gaps = 23/470 (4%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF + R +L+ WN ++ K D + + + + + +F+ + + D
Sbjct: 69 VFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSD 128
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
+ G+ + +K GF+ L V+N+L++MY + A+K+F + RDVVSWN+II
Sbjct: 129 VRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICG 188
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ F K L+L+ M V + T + I++ L +G + + ++ + D
Sbjct: 189 YYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVD 248
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
+++G+ L+D Y + ++ A F ++ KNIVSWNA+I+GYA + + L
Sbjct: 249 LYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLF----- 303
Query: 337 GYRPNEFTFSHVLRSS---LAFQLLQLHCLIIRMGYENY-------EYVLGSLMTSYAKS 386
NE V+ + + + L + H +++ E E + + +++ A
Sbjct: 304 ----NEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHL 359
Query: 387 GLISDALA---FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
G + A ++ +I V N + +Y + G + +++ + ++ D VSW +I
Sbjct: 360 GSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSII 419
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
+ A NG + L +F M I P + TFV +L AC+ + + G ++ T +
Sbjct: 420 SGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRL 479
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG 552
+ + ++D+ + G + + +M +V+ W L+SA L+G
Sbjct: 480 APEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHG 529
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 222/483 (45%), Gaps = 73/483 (15%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQASVL 66
+N +I S+ DA+ + M +G + + TF L SC ++ V +G ++ +
Sbjct: 81 WNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSM 140
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K G F + FV AL+ +Y G L VF+ M + +V+WNSI+ + + + +
Sbjct: 141 KLG-FESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVL 199
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
LF E+ V + + I + E G+ + + ++G +L + N+L++MY
Sbjct: 200 DLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMY 259
Query: 187 FQCAGI-----------------W--------------SAEKMFKDVEIRDVVSWNTIIG 215
+ I W +A+K+F ++ RDV+SW ++I
Sbjct: 260 GRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMII 319
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+ ++ +A++L+ M V +V P++ T +++CA L + G+++H + K+ ++
Sbjct: 320 GYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKS 379
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELL 334
DVFVG++L+D Y KC +E A F+++ ++ VSW ++I G A + +++ + ++L
Sbjct: 380 DVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQML 439
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE-----YVLGSLMTSYAKSGLI 389
+ G P TF VL L H ++ G E+++ Y L M Y G +
Sbjct: 440 KEGICPTHGTFVGVL-------LACAHVGLVDKGVEHFKSMENTYRLAPEMKHY---GCV 489
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAH 448
D L R+G + + ++ PD+V W I+++AC
Sbjct: 490 VDLLC----------------------RSGYLDMAYNFIKKMPIVPDVVIWRILLSACKL 527
Query: 449 NGD 451
+G+
Sbjct: 528 HGN 530
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 32/285 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVEGA 59
M +R+VVS+NSII Y + + L +F M T +S L+ E
Sbjct: 174 MLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMG 233
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ D ++G L+ +YGR G +D VF M K++V+WN+++ + K
Sbjct: 234 DYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKV 293
Query: 120 G--------FVE-----------------------DCMFLFCELVRSEVALTESSFVGVI 148
G F E + + LF E++ S V E + +
Sbjct: 294 GNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATAL 353
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
++ L+ GE +H + K+ ++ V NSL++MY +C + A ++F D++ RD V
Sbjct: 354 SACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSV 413
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
SW +II LA + AL ++ +M + + P TFV V+ +CA
Sbjct: 414 SWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACA 458
>gi|357514793|ref|XP_003627685.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344437|ref|XP_003636296.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358345563|ref|XP_003636846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502231|gb|AES83434.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502781|gb|AES83984.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521707|gb|AET02161.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 791
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 174/605 (28%), Positives = 296/605 (48%), Gaps = 49/605 (8%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
GAQ+ V+ G F + V +L+ +Y + G + + VFE + +V+WN+I+S F
Sbjct: 103 GAQIHGFVVATG-FVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTILSGFE 161
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVI-----HGLSNEQDLEFGEQIHGLVIKNGF 172
K D + C + + V ++ + ++ FG Q+H LV+K GF
Sbjct: 162 KS---VDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLVVKCGF 218
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA-ESENFG-KALELY 230
E+ + N+LV MY + G+ A ++F ++ IRD+VSWN ++ A E E +G +A+ L+
Sbjct: 219 GCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLF 278
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
M + + + + I++C +N GK IH K V V + L+ Y+KC
Sbjct: 279 GNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKC 338
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLR 350
L A F ++S +N+VSW LI S + L + G PN+ TF
Sbjct: 339 KVLRDAKAVFQDMSARNVVSWTTLI----SIDEENVVSLFNAMRVDGVYPNDVTF----- 389
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ LH + IR + K GL+ L + L+ + V +N
Sbjct: 390 ------IGLLHAITIR---------------NMVKEGLMVHGLCLKSCLSSEQNV--SNS 426
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR-IYP 469
+ +Y + E+ K+ +L +SWN +I+ A NG KE ++ A + I P
Sbjct: 427 LITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQNGLCKEAF--LTFLSAIKEIKP 484
Query: 470 DNYTFVSLLSACSKLCNLAL--GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
+ YTF S+L+A + +++L G H + K + ++D FV L+DMYGK G+I S
Sbjct: 485 NQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGL-NTDPFVAGALLDMYGKRGNINESQ 543
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
++FNE ++ +WT +ISA +G + + ++E+E G D + ++VL AC G
Sbjct: 544 RVFNETPEKTQFSWTGMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKG 603
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
+V G +F+ M + + +EP +HY +VD+L R G L EAE+++ +P P + ++
Sbjct: 604 MVDVGHIIFDSMVKKHSIEPTPEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSL 663
Query: 648 LEGCQ 652
L C+
Sbjct: 664 LGSCK 668
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 180/356 (50%), Gaps = 14/356 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCG--YVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE 57
M R++VS+N+++S Y++ G Y +A+ +F M+ G + G +S C +E
Sbjct: 248 MTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLE 307
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G Q+ K G + V L+ Y + L + +VF+DM +++V+W +++SI
Sbjct: 308 FGKQIHGLAQKLG-YGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLISI- 365
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
E+ + LF + V + +F+G++H ++ ++ G +HGL +K+ E
Sbjct: 366 ----DEENVVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQ 421
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V+NSL+ MY + I ++K+F+++ + +SWN +I A++ +A +L ++
Sbjct: 422 NVSNSLITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTFLS-AIK 480
Query: 237 IVFPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ PNQ TF V+N+ A ++ L G+ H+ +IK L D FV AL+D Y K N+
Sbjct: 481 EIKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNIN 540
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVL 349
+ F+E K SW +I YA S+ L E+ + G + TF VL
Sbjct: 541 ESQRVFNETPEKTQFSWTGMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSVL 596
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 187/439 (42%), Gaps = 74/439 (16%)
Query: 238 VFPNQTTFVYVIN-----------SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
VF NQT F ++ N +C G ILG IH V+ V V ++L+
Sbjct: 71 VFKNQTQFPFLQNIDEVTLALSFKACRG--EFILGAQIHGFVVATGFVSRVTVSNSLMKM 128
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFS 346
Y K E A F +S +IVSWN ++ G+ + + L + + P +T
Sbjct: 129 YCKAGRFELALCVFEGLSCPDIVSWNTILSGFEKSVDALNFACFMHLNGVVFDPVTYT-- 186
Query: 347 HVLRSSLAFQL-------------LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
++L+F LQLH L+++ G+ ++ +L+T
Sbjct: 187 ----TALSFCWDRDYWDDHGFLFGLQLHSLVVKCGFGCEVFIGNALVT------------ 230
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
+Y+R G +E ++ +++ D+VSWN +++ A G+
Sbjct: 231 --------------------MYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECY 270
Query: 454 --EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
E + LF M + D+ + +SAC NL G +HGL +K + VCN
Sbjct: 271 GLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLG-YGTHVAVCN 329
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
+LI Y KC + + +F +M+ RNV++WT LIS + + F M G P
Sbjct: 330 VLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLISI-----DEENVVSLFNAMRVDGVYP 384
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ V I +L A +V+EG+ + +S + E + + ++ + ++ ++E++KI
Sbjct: 385 NDVTFIGLLHAITIRNMVKEGLMVHGLCLKSC-LSSEQNVSNSLITMYAKFESIQESKKI 443
Query: 632 ITTMPFPPNALIWRTFLEG 650
+ + + W + G
Sbjct: 444 FEELNY-QGTISWNALISG 461
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 148/325 (45%), Gaps = 33/325 (10%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINR--------------------------GFEPTQFT 43
N +IS YS+C + DA +F M R G P T
Sbjct: 329 NVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLISIDEENVVSLFNAMRVDGVYPNDVT 388
Query: 44 FGGLLSCDSLNPV--EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM 101
F GLL ++ + EG + LK+ L ++ V +L+ +Y + + E +FE++
Sbjct: 389 FIGLLHAITIRNMVKEGLMVHGLCLKSCL-SSEQNVSNSLITMYAKFESIQESKKIFEEL 447
Query: 102 PRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD--LEF 159
+ ++WN+++S + ++G ++ F ++ E+ + +F V++ ++ +D L+
Sbjct: 448 NYQGTISWNALISGYAQNGLCKEAFLTFLSAIK-EIKPNQYTFGSVLNAIAAAEDISLKH 506
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
G++ H +IK G + + VA +L++MY + I ++++F + + SW +I A A
Sbjct: 507 GQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYAR 566
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI-HAKVIKNALECDVF 278
++ + LY + + + TF+ V+ +C +G I + V K+++E
Sbjct: 567 HGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIEPTPE 626
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEI 303
S +VD + L+ A +I
Sbjct: 627 HYSIMVDMLGRVGRLDEAEELMHQI 651
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 91/170 (53%), Gaps = 6/170 (3%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL----SCDSLNPVEGA 59
+ +S+N++IS Y++ G ++A FL I + +P Q+TFG +L + + ++ G
Sbjct: 450 QGTISWNALISGYAQNGLCKEAFLTFLSAI-KEIKPNQYTFGSVLNAIAAAEDISLKHGQ 508
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + ++K GL D FV ALL +YG+ G ++E VF + P K+ +W ++S + +H
Sbjct: 509 RCHSHLIKLGL-NTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYARH 567
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
G E M L+ E+ R L +F+ V+ + ++ G I ++K
Sbjct: 568 GDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVK 617
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 181/660 (27%), Positives = 315/660 (47%), Gaps = 36/660 (5%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQAS 64
N+ + ++S Y+R G V DA R+F M R + +++C N G A
Sbjct: 94 NLRTGTILLSGYARAGRVRDARRVFDGMGVR----NTVAWNAMVTCYVQN---GDITLAR 146
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS---IFGKHGF 121
L + + D +L Y ++E ++FE MP ++ V+W ++S + +HG
Sbjct: 147 KLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGR 206
Query: 122 VEDCMF--LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
D MF + CE + E + + V V+ + + E IH LV K GF+ +++V
Sbjct: 207 AWD-MFRTMLCEGMTPE----QPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVG 261
Query: 180 NSLVNMYFQCAGIW-SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+++N Y + + SA K F+ + R+ +W+TII AL+++ A +Y R + V
Sbjct: 262 TAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSV 321
Query: 239 FPNQTTFVYVINSCAGLQNS-ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P++T+ + + + ++ IL IH E +V +A++ Y + + ++ A
Sbjct: 322 -PSRTSMLTGLARYGRIDDAKILFDQIH--------EPNVVSWNAMITGYMQNEMVDEAE 372
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F+ + +N +SW +I GYA S ++ L L + G P+ + + + +
Sbjct: 373 DLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIE 432
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L Q+H L ++ G + YV +L+T Y K I + + + V N
Sbjct: 433 ALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTV-KDTVSYNSFM 491
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+ ++E + + + PD+VSW +I+ACA E +E+F+ M R P+
Sbjct: 492 SALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPP 551
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
LL L LG +H + K + S V N L+ MY KC S S+K+F+
Sbjct: 552 ILTILLGLSGNLGAPQLGQQIHTIAIKLGM-DSGLVVANALVSMYFKCSS-ADSLKVFDS 609
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
M +R++ TW +I+ +G + A+ ++ M G P+ V + +L AC H GLV EG
Sbjct: 610 MEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEG 669
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F+ M+ YG+ P ++HY C+VDLL R G ++ AE I MP P+++IW L C+
Sbjct: 670 HQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACK 729
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 132/551 (23%), Positives = 223/551 (40%), Gaps = 90/551 (16%)
Query: 86 GRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF-----CELVRSEVALT 140
GR G L E VF+ MP + ++ WNS++ + +G + L L + L+
Sbjct: 44 GRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLS 103
Query: 141 ESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK 200
+ G + D G+ ++N + N++V Y Q I A K+F
Sbjct: 104 GYARAGRVRDARRVFD--------GMGVRNTVAW-----NAMVTCYVQNGDITLARKLFD 150
Query: 201 DVEIRDVVSWNTIIGALAES-------------------------------ENFGKALEL 229
+ RDV SWNT++ S E G+A ++
Sbjct: 151 AMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDM 210
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
+ M + + P Q V V+++ L + +SIH V K E DV VG+A+++ Y K
Sbjct: 211 FRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTK 270
Query: 290 CDN-LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
N L+ A F ++ +N +W+ +I + F + + L P+
Sbjct: 271 DVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSR------ 324
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
S++T A+ G I DA ++ P V
Sbjct: 325 ----------------------------TSMLTGLARYGRIDDAKILFDQIHEPNVVSWN 356
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+I G Y + +E L +++ + +SW +IA A NG ++ L + + +
Sbjct: 357 AMITG-YMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGML 415
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P + S ACS + L G +H L K +++VCN LI +YGK SIGS +
Sbjct: 416 PSLSSLTSSFFACSNIEALETGKQVHSLAVKAG-CQFNSYVCNALITLYGKYRSIGSVRQ 474
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
IF+ MT ++ +++ + +SAL N A + F M PD V+ +++AC
Sbjct: 475 IFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMP----SPDVVSWTTIISACAQADQ 530
Query: 589 VREGMELFERM 599
E +E+F M
Sbjct: 531 GNEAVEIFRSM 541
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 138/594 (23%), Positives = 253/594 (42%), Gaps = 57/594 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
MP+RN VS+ +IS Y A MF M+ G P Q +LS P
Sbjct: 183 MPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGIL 242
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRH-GCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+ V K G F D VGTA+L Y + LD V FE M ++ TW++I++
Sbjct: 243 ESIHVLVHKTG-FERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALS 301
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVI-HGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ G ++D ++ V S G+ +G ++ + F +QIH + +
Sbjct: 302 QAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILF-DQIH--------EPNV 352
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ N+++ Y Q + AE +F + R+ +SW +I A + +AL +
Sbjct: 353 VSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRK 412
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ P+ ++ +C+ ++ GK +H+ +K + + +V +AL+ Y K ++
Sbjct: 413 GMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSV 472
Query: 297 HLCFSEISNKNIVSWNALILG-------------YASKSSP--TSIFLLIELLQLGYRPN 341
F ++ K+ VS+N+ + + + SP S +I + N
Sbjct: 473 RQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGN 532
Query: 342 EFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
E + RS L + L ++ +L L + L L +
Sbjct: 533 EAV--EIFRSMLHERELPNPPILT---------ILLGLSGNLGAPQLGQQIHTIAIKLGM 581
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
+V AN + +Y + +++K+ +E DI +WN +I A +G +E + +++
Sbjct: 582 DSGLVVANALVSMYFKCSSA-DSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQL 640
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML------ID 515
M +A + P+ TFV LL ACS + L H K +SSD + +L +D
Sbjct: 641 MVSAGVLPNEVTFVGLLHACS---HSGLVDEGHQFFKS---MSSDYGLTPLLEHYACMVD 694
Query: 516 MYGKCGSI-GSSVKIFNEMTDRNVITWTALISALGLNG---FAQRALEKFREME 565
+ G+ G + G+ I++ + + + W+AL+ A ++ +RA EK +E
Sbjct: 695 LLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIE 748
>gi|302754104|ref|XP_002960476.1| hypothetical protein SELMODRAFT_70138 [Selaginella moellendorffii]
gi|300171415|gb|EFJ38015.1| hypothetical protein SELMODRAFT_70138 [Selaginella moellendorffii]
Length = 672
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 170/660 (25%), Positives = 310/660 (46%), Gaps = 47/660 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQL 61
+RN+ ++ ++A+++ G A+ +F M G E + F + +C SL + +
Sbjct: 48 ERNLFTWTIAMTAFAQNGDPRQAIHLFQAMCLDGVELDRVAFATAVGACSSLGDLHTGRS 107
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
S + F +DA + +L+ +Y + G +F+ + K+ V + ++++ + +
Sbjct: 108 LHSTIATSSFQSDAVLRVSLINMYAKAGEFALAEDLFQRLKPKNAVAYTALIAAYSQFKM 167
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + L+ + VA + + + + ++E D G IH + G D + VA++
Sbjct: 168 GREALGLYRAMHLEGVAPDKVAMLSALGACASEPD---GRAIHACITCCGSDGDDTVASA 224
Query: 182 LVNMYFQCAGIWSAEKMF--KDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
LV+MY + + SA+ +F + V V WN++I A +S + +ALEL+ +M ++ V
Sbjct: 225 LVSMYGRFQMLESAKSVFFHRRVPRSSVELWNSMISAYVQSGHHREALELFEKMELEGVA 284
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ T V ++ C+ L+ + IHA+ ++ ++ D V +L++ Y +C +LE A
Sbjct: 285 PDVVTIVEILGVCSVLRKLDKARMIHAQ-LRARVDADTAVVDSLLNVYRECRSLEDAVTV 343
Query: 300 FSEISN--KNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQ 356
F E + ++ V+WN +I YA P L L+ L G P E T+ VL ++ +
Sbjct: 344 FREEAGGARDCVAWNTMIAAYAECGDPGMALKLFTLMDLHGVEPTEVTYVAVLGAASSLG 403
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L LH I G + +V SLM Y G +S A A
Sbjct: 404 ALTRGASLHHRIRSCGLDELPFVSNSLMQFYGSCGRLSSATA------------------ 445
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+ LER D VSWN ++ +G L +F M + +
Sbjct: 446 --------------VFHSLERRDEVSWNTIMGLYTQHGCCDTALAVFHGMELEGVRANVI 491
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T ++++AC+ + A+G S+H + + + V + L+ MYGK G + +V FN+
Sbjct: 492 TLTNVVTACTVTGDAAIGKSIHARVLSMGL-EHHSAVGSALVAMYGKFGMLDRAVSCFND 550
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
++ +N ++W AL++ G + ++ R M+ G + D + VL AC HGGLV E
Sbjct: 551 ISAKNTVSWNALMTGFAQQGQSVETVQLSRAMQLQGMESDGATYLVVLFACSHGGLVEEA 610
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F + V +HY C++DLL R G L AE + +MPF P++ W + + C+
Sbjct: 611 LSCFSNLVEDGSVSVNDEHYGCLIDLLARAGWLDRAEDLFRSMPFEPDSTSWMSLVGACK 670
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 147/600 (24%), Positives = 260/600 (43%), Gaps = 43/600 (7%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G + + K+G + + ++G L+ +YG+ G L + + F + ++L TW ++ F
Sbjct: 3 QGKTIHEQMSKDG-YARETYLGNLLVDMYGKCGSLRDAEAAFHTIRERNLFTWTIAMTAF 61
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G + LF + V L +F + S+ DL G +H + + F +
Sbjct: 62 AQNGDPRQAIHLFQAMCLDGVELDRVAFATAVGACSSLGDLHTGRSLHSTIATSSFQSDA 121
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++ SL+NMY + AE +F+ ++ ++ V++ +I A ++ + +AL LY M ++
Sbjct: 122 VLRVSLINMYAKAGEFALAEDLFQRLKPKNAVAYTALIAAYSQFKMGREALGLYRAMHLE 181
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P++ + + +CA + G++IHA + + D V SALV Y + LE A
Sbjct: 182 GVAPDKVAMLSALGACASEPD---GRAIHACITCCGSDGDDTVASALVSMYGRFQMLESA 238
Query: 297 HLCF--SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSL 353
F + ++ WN++I Y L E ++L G P+ T +L
Sbjct: 239 KSVFFHRRVPRSSVELWNSMISAYVQSGHHREALELFEKMELEGVAPDVVTIVEILGVCS 298
Query: 354 AFQLLQLHCLI---IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ L +I +R + V+ SL+ Y + + DA+
Sbjct: 299 VLRKLDKARMIHAQLRARVDADTAVVDSLLNVYRECRSLEDAV----------------- 341
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
TV D V+WN +IAA A GD L+LF M + P
Sbjct: 342 -------------TVFREEAGGARDCVAWNTMIAAYAECGDPGMALKLFTLMDLHGVEPT 388
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
T+V++L A S L L G+SLH I+ + FV N L+ YG CG + S+ +F
Sbjct: 389 EVTYVAVLGAASSLGALTRGASLHHRIRSCG-LDELPFVSNSLMQFYGSCGRLSSATAVF 447
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + R+ ++W ++ +G AL F ME G + + + L V+TAC G
Sbjct: 448 HSLERRDEVSWNTIMGLYTQHGCCDTALAVFHGMELEGVRANVITLTNVVTACTVTGDAA 507
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G + R+ S G+E +V + ++G L A + N + W + G
Sbjct: 508 IGKSIHARV-LSMGLEHHSAVGSALVAMYGKFGMLDRAVSCFNDIS-AKNTVSWNALMTG 565
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 173/339 (51%), Gaps = 4/339 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+P +V +NS+ISAY + G+ +AL +F M G P T +L C L ++ A
Sbjct: 247 VPRSSVELWNSMISAYVQSGHHREALELFEKMELEGVAPDVVTIVEILGVCSVLRKLDKA 306
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP--RKSLVTWNSIVSIFG 117
++ + L+ + AD V +LL +Y L++ V+VF + + V WN++++ +
Sbjct: 307 RMIHAQLRARVD-ADTAVVDSLLNVYRECRSLEDAVTVFREEAGGARDCVAWNTMIAAYA 365
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G + LF + V TE ++V V+ S+ L G +H + G D
Sbjct: 366 ECGDPGMALKLFTLMDLHGVEPTEVTYVAVLGAASSLGALTRGASLHHRIRSCGLDELPF 425
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V+NSL+ Y C + SA +F +E RD VSWNTI+G + AL ++ M ++
Sbjct: 426 VSNSLMQFYGSCGRLSSATAVFHSLERRDEVSWNTIMGLYTQHGCCDTALAVFHGMELEG 485
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V N T V+ +C ++ +GKSIHA+V+ LE VGSALV Y K L+ A
Sbjct: 486 VRANVITLTNVVTACTVTGDAAIGKSIHARVLSMGLEHHSAVGSALVAMYGKFGMLDRAV 545
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
CF++IS KN VSWNAL+ G+A + L +QL
Sbjct: 546 SCFNDISAKNTVSWNALMTGFAQQGQSVETVQLSRAMQL 584
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 203/455 (44%), Gaps = 39/455 (8%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
LE G+ IH + K+G+ E + N LV+MY +C + AE F + R++ +W + A
Sbjct: 1 LEQGKTIHEQMSKDGYARETYLGNLLVDMYGKCGSLRDAEAAFHTIRERNLFTWTIAMTA 60
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
A++ + +A+ L+ M +D V ++ F + +C+ L + G+S+H+ + ++ + D
Sbjct: 61 FAQNGDPRQAIHLFQAMCLDGVELDRVAFATAVGACSSLGDLHTGRSLHSTIATSSFQSD 120
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
+ +L++ YAK A F + KN V++ ALI Y+ L + L
Sbjct: 121 AVLRVSLINMYAKAGEFALAEDLFQRLKPKNAVAYTALIAAYSQFKMGREALGLYRAMHL 180
Query: 337 -GYRPNEFTFSHVLRSSLAF-QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
G P++ L + + +H I G + + V +L++ Y + ++ A +
Sbjct: 181 EGVAPDKVAMLSALGACASEPDGRAIHACITCCGSDGDDTVASALVSMYGRFQMLESAKS 240
Query: 395 FVTALNIPRAVVPA-NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
+PR+ V N + Y ++G + E ++L
Sbjct: 241 VFFHRRVPRSSVELWNSMISAYVQSGHHREALEL-------------------------- 274
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
F+ M + PD T V +L CS L L +H ++ + +DT V + L
Sbjct: 275 -----FEKMELEGVAPDVVTIVEILGVCSVLRKLDKARMIHAQLRAR--VDADTAVVDSL 327
Query: 514 IDMYGKCGSIGSSVKIFNEMTD--RNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
+++Y +C S+ +V +F E R+ + W +I+A G AL+ F M+ G +P
Sbjct: 328 LNVYRECRSLEDAVTVFREEAGGARDCVAWNTMIAAYAECGDPGMALKLFTLMDLHGVEP 387
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
V +AVL A G + G L R+ RS G++
Sbjct: 388 TEVTYVAVLGAASSLGALTRGASLHHRI-RSCGLD 421
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 86/172 (50%), Gaps = 3/172 (1%)
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
L G ++H + K + + +T++ N+L+DMYGKCGS+ + F+ + +RN+ TWT ++
Sbjct: 1 LEQGKTIHEQMSK-DGYARETYLGNLLVDMYGKCGSLRDAEAAFHTIRERNLFTWTIAMT 59
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
A NG ++A+ F+ M G + DRVA + AC G + G L + S +
Sbjct: 60 AFAQNGDPRQAIHLFQAMCLDGVELDRVAFATAVGACSSLGDLHTGRSLHSTIATS-SFQ 118
Query: 607 PEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAK 658
+ ++++ + G AE + + P NA+ + + + ++ +
Sbjct: 119 SDAVLRVSLINMYAKAGEFALAEDLFQRLK-PKNAVAYTALIAAYSQFKMGR 169
>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
Length = 849
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 159/602 (26%), Positives = 295/602 (49%), Gaps = 47/602 (7%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+QA + + F D + ++ YG+ GC+ + VF + ++ +W +++ + ++G
Sbjct: 102 IQAHISHSKRFAGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNG 161
Query: 121 FVEDCMFLFCELVRSEV---ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYEL 176
+ + L ++ V A+T ++ +G + L N + +IH Y++
Sbjct: 162 HHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGNWDE---ARKIHARAAATCQLTYDV 218
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++ +L++MY +C I+ AE +F +D+ N +I A + A+ + R+
Sbjct: 219 VLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPS 278
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ PNQ T+ + +CA + H I + L DV V +ALV Y++C +LE A
Sbjct: 279 GLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDA 338
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLA 354
F + KN+V+WN +I GYA + + ++ L + + G P+E TF +VL S SLA
Sbjct: 339 RRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLA 398
Query: 355 FQLL---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L +H ++ GY++ VL +L+T Y+ G + DA+
Sbjct: 399 EHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDV---------------- 442
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+++ V S ++SW ++ A NG+ + L LF+ M + +
Sbjct: 443 ---------FHKGVTTHSS-----VISWTAMLTALTRNGEGRSALALFRKMDLEGVRANV 488
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKI 529
TFVS + ACS + L G H + ++ + D + LI++YGKCG + ++++
Sbjct: 489 VTFVSTIDACSSIGALVEG---HAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEV 545
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F+ ++ +N++TW +++A NG + E +EM+ G +P+ + L+ +L C H GLV
Sbjct: 546 FHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMTLLNMLFGCSHNGLV 605
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
+ + F M + + P +HY C+VDLL R G L+E E I++ PF ++++W + L
Sbjct: 606 AKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLG 665
Query: 650 GC 651
C
Sbjct: 666 SC 667
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 233/492 (47%), Gaps = 54/492 (10%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV-EGAQL 61
++++ N++ISAY + GY DA+ F + G +P Q T+ L + N V A++
Sbjct: 246 NKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARV 305
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
D V TAL+ +Y R G L++ VF+ MP K++VTWN +++ + + G+
Sbjct: 306 AHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGY 365
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ + L+ + + V E +FV V+ S + L G IH V+ G+D L V ++
Sbjct: 366 TDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSA 425
Query: 182 LVNMYFQCAGIWSAEKMF-KDVEIR-DVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
L+ MY C + A +F K V V+SW ++ AL + AL L+ +M ++ V
Sbjct: 426 LITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVR 485
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
N TFV I++C+ + + G +I +VI DV +G++L++ Y KC L+ A
Sbjct: 486 ANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEV 545
Query: 300 FSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F +S KNIV+WN ++ + T S LL E+ G +PNE T
Sbjct: 546 FHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMT-------------- 591
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN----IIAGI 414
L +++ + +GL++ A+++ ++ +VP + + +
Sbjct: 592 -----------------LLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDL 634
Query: 415 YNRTGQYNETVKLLSQLERP---DIVSWNIVIAACAHNGDYKEVLELFKYMRAAR----I 467
R+GQ E +S +P D V W ++ +C + D + + +RAAR +
Sbjct: 635 LGRSGQLEEVEAFISS--KPFSLDSVLWMSLLGSCVIHSDVE------RGLRAARRVLGL 686
Query: 468 YPDNYTFVSLLS 479
P N + LLS
Sbjct: 687 DPKNASPYVLLS 698
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 140/268 (52%), Gaps = 7/268 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
MP +NVV++N +I+ Y++ GY ++AL++++ M G EP + TF +L SL + G
Sbjct: 345 MPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAG 404
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFED--MPRKSLVTWNSIVSIF 116
+ V+ G + + V +AL+ +Y G L + V VF S+++W ++++
Sbjct: 405 RDIHKHVVDAG-YDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTAL 463
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G + LF ++ V +FV I S+ L G I VI G ++
Sbjct: 464 TRNGEGRSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDV 523
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++ SL+N+Y +C + A ++F + +++V+WNTI+ A +++ + EL M +D
Sbjct: 524 VLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLD 583
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSI 264
PN+ T + ++ C+ N ++ K++
Sbjct: 584 GAQPNEMTLLNMLFGCS--HNGLVAKAV 609
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 135/301 (44%), Gaps = 23/301 (7%)
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFV---------TALNIPRAVVPA-----------N 409
E+ + L SL KSG + D A+V TAL +A + N
Sbjct: 62 EDVKQKLASLEEQNQKSGFV-DPAAYVSLLKQSGDVTALKTIQAHISHSKRFAGDRLLLN 120
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ Y + G + + S + P++ SW I++AA A NG +K VLEL + M ++P
Sbjct: 121 CVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWP 180
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ T +++ A S+L N +H T ++ D + LIDMY KCG I + +
Sbjct: 181 NAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVV 240
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F++ ++++ A+ISA G+ A+ F ++ G +P++V + AC G+
Sbjct: 241 FDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVY 300
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
+ S + P++ +V + R G L++A ++ MP N + W +
Sbjct: 301 SDARVAHMCFILS-KLRPDVVVNTALVSMYSRCGSLEDARRVFDRMP-GKNVVTWNVMIA 358
Query: 650 G 650
G
Sbjct: 359 G 359
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 180/693 (25%), Positives = 322/693 (46%), Gaps = 63/693 (9%)
Query: 1 MPDRNVVSFNSIISAY-------------------------------SRCGYVEDALRMF 29
MP R+++++NS+ISAY R G V +A R+F
Sbjct: 60 MPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVF 119
Query: 30 LYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
M+ R + ++SC N G A L + + D ++L Y
Sbjct: 120 DGMLER----NTVAWNAMISCYVQN---GDITMARRLFDAMPSRDVSSWNSMLTGYCHSL 172
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGK---HGFVEDCMFLFCELVRSEVALTESSFVG 146
+ + ++FE MP ++LV+W ++S +G+ HG D +FC++ R + +S+F
Sbjct: 173 QMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWD---IFCKMHREGLLPDQSNFAS 229
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW-SAEKMFKDVEIR 205
+ + +L+ E + L +K GF+ ++++ +++N+Y + + +A K F+ + R
Sbjct: 230 ALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIER 289
Query: 206 DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS-ILGKSI 264
+ +W+T+I AL+ A+ +Y R V + +T + + C + ++ IL + I
Sbjct: 290 NEYTWSTMIAALSHGGRIDAAIAVYERDPVKSI-ACRTALITGLAQCGRIDDARILFEQI 348
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-S 323
+ V +AL+ Y + + A F ++ +N +SW +I GYA S
Sbjct: 349 PEPI--------VVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRS 400
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSL 379
++ LL EL + G P+ + + + + L Q+H L +++G + + +L
Sbjct: 401 EEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNAL 460
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+T Y K + A + + + + +V N + +E + D VSW
Sbjct: 461 ITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSW 519
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+I+A AH E + FK M P++ LL C L +G +H + K
Sbjct: 520 TTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIK 579
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+ S+ V N LI MY KCG S +IF+ M +R++ TW +I+ +G + A++
Sbjct: 580 LGM-DSELIVANALISMYFKCGC-ADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIK 637
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
++ ME G P+ V + +L AC H GLV EG + F+ M++ YG+ P +HY C+VDLL
Sbjct: 638 MYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLL 697
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G ++ AE+ I MP P+ +IW L C+
Sbjct: 698 GRTGDVQGAEQFIYDMPIEPDTVIWSALLGACK 730
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/542 (23%), Positives = 235/542 (43%), Gaps = 72/542 (13%)
Query: 86 GRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF-----CELVRSEVALT 140
GR G + E VF+ MPR+ ++ WNS++S + +G + L+ + + L+
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLS 104
Query: 141 ESSFVG-------VIHGLSNEQDLEFGEQIHGLVIKNG--------FD----YELLVANS 181
+G V G+ + + I ++NG FD ++ NS
Sbjct: 105 GYGRLGRVLEARRVFDGMLERNTVAWNAMI-SCYVQNGDITMARRLFDAMPSRDVSSWNS 163
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
++ Y + A +F+ + R++VSW +I EN GKA +++ +M + + P+
Sbjct: 164 MLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPD 223
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN-LEGAHLCF 300
Q+ F +++ GL N + +S+ +K E DV +G+A+++ Y++ + L+ A F
Sbjct: 224 QSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFF 283
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ- 359
+ +N +W+ +I SH R A + +
Sbjct: 284 ESMIERNEYTWSTMIAA---------------------------LSHGGRIDAAIAVYER 316
Query: 360 --LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+ + R +L+T A+ G I DA + P V +I G Y +
Sbjct: 317 DPVKSIACRT----------ALITGLAQCGRIDDARILFEQIPEPIVVSWNALITG-YMQ 365
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G NE +L ++ + +SW +IA A NG +E L L + + + + P + S+
Sbjct: 366 NGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSI 425
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
ACS + L G+ +H L K ++F CN LI MYGKC ++ + ++F+ M ++
Sbjct: 426 FFACSNIVALETGTQVHSLAVKVG-CQFNSFACNALITMYGKCRNMEYARQVFSRMVTKD 484
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+++W + ++AL N A F M D V+ +++A H E M F+
Sbjct: 485 IVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFK 540
Query: 598 RM 599
M
Sbjct: 541 TM 542
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 109/229 (47%), Gaps = 12/229 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M R+ VS+ +IISAY+ +A+ F M P LL C SL + G
Sbjct: 511 MLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIG 570
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K G+ ++ V AL+ +Y + GC D +F+ M + + TWN+I++ + +
Sbjct: 571 QQIHTVAIKLGMD-SELIVANALISMYFKCGCADS-RRIFDLMEERDIFTWNTIITGYAQ 628
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG + + ++ + + V E +FVG+++ S+ ++ G + + + DY L
Sbjct: 629 HGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQ---DYGLTP 685
Query: 179 ANS----LVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESEN 222
+V++ + + AE+ D+ I D V W+ ++GA +N
Sbjct: 686 LPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKN 734
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 62/141 (43%), Gaps = 10/141 (7%)
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
C+ I G+ G +G + ++F+ M R++I W ++ISA NG A + + +
Sbjct: 37 CSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM 96
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
+ + +L+ G V E +F+ M +E ++ ++ V+ G + A
Sbjct: 97 RTGAI----LLSGYGRLGRVLEARRVFDGM-----LERNTVAWNAMISCYVQNGDITMAR 147
Query: 630 KIITTMPFPPNALIWRTFLEG 650
++ MP + W + L G
Sbjct: 148 RLFDAMP-SRDVSSWNSMLTG 167
>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 167/523 (31%), Positives = 262/523 (50%), Gaps = 52/523 (9%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIK---NGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
F ++ ++ DL G +H ++K NGF +L+ N L+++Y + I A ++F
Sbjct: 61 QFSQILQECTDAGDLRTGMSVHTYLVKLNINGF---ILIWNKLLSLYLKFGHIHHAHQLF 117
Query: 200 KDVEIRDVVSWNTIIGALAESENFGKALEL---YLRMSVDIVFPNQTTFVYVINSCAGLQ 256
+ RDVVS+NT+I A N AL+L Y +M + V PN TF +I +C GL
Sbjct: 118 DTMPRRDVVSFNTMISA--SVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLI 175
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
L HA ++ L + FVGS+LVD YAK LE A F+EI ++VSWN +I
Sbjct: 176 ALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMID 235
Query: 317 GYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQL---LQLHCLIIRMGYEN 371
G A +S ++ + ++L+ R + FT + ++++ S L +Q H I++G +
Sbjct: 236 GCARNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAH 295
Query: 372 YEYVLGSLMTSYAK--SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
+ +L+T Y+K G+ S VK+
Sbjct: 296 ETPIYNALITMYSKCEKGVAS---------------------------------PVKIFG 322
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
+ P+I+SW +I+ N +E + LFK M + ++++F S+L L NL
Sbjct: 323 SISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNLANLEQ 382
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G +H I K+ D V N LIDMY KCGS+ + +F +M +V++ T +I + G
Sbjct: 383 GKQIHARIIKS-WFGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMSYG 441
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
+G + ALE EM+ G PD V + L AC HGGLV EG+ +F+ M + ++P+
Sbjct: 442 QHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHGGLVEEGVRVFKIMIEDHNLKPKR 501
Query: 610 DHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+H+ CVVD+L R G L EAE I M + L+W T L C+
Sbjct: 502 EHFACVVDMLGRAGRLNEAENFIDEMGIESDVLVWETLLGACR 544
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 215/461 (46%), Gaps = 42/461 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGY-VEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE- 57
MP R+VVSFN++ISA R Y D + ++ M +P TF GL+ +CD L +
Sbjct: 120 MPRRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRL 179
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
A ++ GL ++ FVG++L+ Y + L++ + F ++ LV+WN ++
Sbjct: 180 RGIFHAHTVRCGL-SSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCA 238
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ E + +F ++++ V + + +I S DL+ G Q HG IK G +E
Sbjct: 239 RNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETP 298
Query: 178 VANSLVNMYFQC-AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ N+L+ MY +C G+ S K+F + +++SW +I ++E +A+ L+ M
Sbjct: 299 IYNALITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRL 358
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V N +F ++ L N GK IHA++IK+ D+ V +AL+D Y+KC +LE A
Sbjct: 359 GVRENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDA 418
Query: 297 HLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
HL F ++ ++VS +I+ Y ++ +L E+ G P+ TF
Sbjct: 419 HLVFMKMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTF---------- 468
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN----II 411
L CL + + GL+ + + + + P +
Sbjct: 469 ----LGCLY-----------------ACSHGGLVEEGVRVFKIMIEDHNLKPKREHFACV 507
Query: 412 AGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
+ R G+ NE + ++ D++ W ++ AC +G+
Sbjct: 508 VDMLGRAGRLNEAENFIDEMGIESDVLVWETLLGACRVHGE 548
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 128/509 (25%), Positives = 233/509 (45%), Gaps = 59/509 (11%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF-VEDCMFLFCELVR 134
+ LL LY + G + +F+ MPR+ +V++N+++S ++ + D + L+ ++ +
Sbjct: 95 LIWNKLLSLYLKFGHIHHAHQLFDTMPRRDVVSFNTMISASVRNNYDALDLVGLYSKMKK 154
Query: 135 SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
+V +F G+I L H ++ G V +SLV+ Y + +
Sbjct: 155 EDVKPNHITFAGLIGACDGLIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLED 214
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A K F ++ D+VSWN +I A + + A+ ++ +M V + T +I +C+
Sbjct: 215 AIKAFNEIMELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSK 274
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL-CFSEISNKNIVSWNA 313
+ G H IK L + + +AL+ Y+KC+ + + F IS NI+SW A
Sbjct: 275 PGDLKHGMQFHGSAIKLGLAHETPIYNALITMYSKCEKGVASPVKIFGSISEPNIISWTA 334
Query: 314 LILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLR--SSLAF--QLLQLHCLIIRMG 368
+I G+ ++ + +I L E+L+LG R N+F+FS +L +LA Q Q+H II+
Sbjct: 335 MISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNLANLEQGKQIHARIIKSW 394
Query: 369 YENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
+ V +L+ Y+K G + DA L F+
Sbjct: 395 FGLDLSVNNALIDMYSKCGSLEDAHLVFM------------------------------- 423
Query: 428 LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNL 487
++ + D+VS +I + +G KE LE+ M++ + PD TF+ L ACS +
Sbjct: 424 --KMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHGGLV 481
Query: 488 ALGSSL-------HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVI 539
G + H L K E F C ++DM G+ G + + +EM + +V+
Sbjct: 482 EEGVRVFKIMIEDHNLKPKRE-----HFAC--VVDMLGRAGRLNEAENFIDEMGIESDVL 534
Query: 540 TWTALISALGLNG---FAQRALEKFREME 565
W L+ A ++G +++ +K E++
Sbjct: 535 VWETLLGACRVHGEMVLGEKSAQKIMELQ 563
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 172/655 (26%), Positives = 301/655 (45%), Gaps = 64/655 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP RN V++NS++SA +R G +++A +F M +R ++ +++ S + G
Sbjct: 44 MPRRNTVTYNSMLSALARHGRIDEARALFDGMPSR----NAVSWNAMIAALSDH---GRV 96
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFGKH 119
A L + + D F T ++ Y R G L+ V + MP K +N+++S + K+
Sbjct: 97 ADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDVLDRMPGDKCTACYNAMISGYAKN 156
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G +D + L E+ ++ S+ G+ + ++F +++ + +++
Sbjct: 157 GRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQFFDEM--------VEKDMVSW 208
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N ++ + + + +A F +E +VVSW T++ + A +L+ RM
Sbjct: 209 NLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISDARDLFDRM------ 262
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P +N + C+V ++D Y + LE A
Sbjct: 263 PE----------------------------RNVVACNV-----MLDGYVRLSRLEEACKL 289
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSH-VLRSSLAFQLL 358
F E+ KN +SW +I G A L++ + + H L+ ++
Sbjct: 290 FDEMPGKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMVNDAR 349
Query: 359 QLHCLIIRMGYENYEYV-LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
Q I G E ++ V ++++ Y + G++ +A+ + V +IAG Y +
Sbjct: 350 Q-----IFDGMEVHDTVCWNTMISGYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAG-YAQ 403
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
GQ + + + ++ R + VSWN VI+ NG + + F MR D T+ S
Sbjct: 404 GGQMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASC 463
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L AC+ L L +G LH L+ ++ I +D F N LI Y KCG + + +IF+EM ++
Sbjct: 464 LRACANLAALHVGRQLHSLLVRSGHI-NDLFARNALISTYAKCGRMLEAKQIFDEMVGKD 522
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+++W AL+ NG A+ FREME G +PD V + +L+AC GL+ EG+ F
Sbjct: 523 IVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLIDEGLGFFN 582
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M Y ++P +HY C+ DLL R G L EA +++ M PNA +W L CQ
Sbjct: 583 SMTEEYSLKPVAEHYACMADLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACQ 637
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 127/304 (41%), Gaps = 46/304 (15%)
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+T A+SG ++ A ++ R V N + R G+ +E L + + VSW
Sbjct: 25 LTRLARSGQLAAARRLFDSM-PRRNTVTYNSMLSALARHGRIDEARALFDGMPSRNAVSW 83
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
N +IAA + +G + LF M + D++++ ++S ++ L L + +
Sbjct: 84 NAMIAALSDHGRVADARGLFDRMPS----RDDFSWTVMVSCYARAGELELARDVLDRMPG 139
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+ T N +I Y K G +VK+ EM ++ +W + ++ L +G RA++
Sbjct: 140 DKC----TACYNAMISGYAKNGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQ 195
Query: 560 KFREM-------------------------EFLGF--KPDRVALIAVLTACRHGGLVREG 592
F EM F G P+ V+ + +L G + +
Sbjct: 196 FFDEMVEKDMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISDA 255
Query: 593 MELFERMNRSYGVEPEMDHYHC--VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+LF+RM PE + C ++D VR L+EA K+ MP N++ W T + G
Sbjct: 256 RDLFDRM-------PERNVVACNVMLDGYVRLSRLEEACKLFDEMP-GKNSISWTTIISG 307
Query: 651 CQRC 654
R
Sbjct: 308 LARA 311
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 17/133 (12%)
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
F N + + G + ++ ++F+ M RN +T+ +++SAL +G A F M
Sbjct: 19 FRSNQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGM--- 75
Query: 568 GFKPDR--VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH--CVVDLLVRYG 623
P R V+ A++ A G V + LF+RM P D + +V R G
Sbjct: 76 ---PSRNAVSWNAMIAALSDHGRVADARGLFDRM-------PSRDDFSWTVMVSCYARAG 125
Query: 624 HLKEAEKIITTMP 636
L+ A ++ MP
Sbjct: 126 ELELARDVLDRMP 138
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 180/693 (25%), Positives = 322/693 (46%), Gaps = 63/693 (9%)
Query: 1 MPDRNVVSFNSIISAY-------------------------------SRCGYVEDALRMF 29
MP R+++++NS+ISAY R G V +A R+F
Sbjct: 60 MPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVF 119
Query: 30 LYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHG 89
M+ R + ++SC N G A L + + D ++L Y
Sbjct: 120 DGMLER----NTVAWNAMISCYVQN---GDITMARRLFDAMPSRDVSSWNSMLTGYCHSL 172
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGK---HGFVEDCMFLFCELVRSEVALTESSFVG 146
+ + ++FE MP ++LV+W ++S +G+ HG D +FC++ R + +S+F
Sbjct: 173 QMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWD---IFCKMHREGLLPDQSNFAS 229
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW-SAEKMFKDVEIR 205
+ + +L+ E + L +K GF+ ++++ +++N+Y + + +A K F+ + R
Sbjct: 230 ALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIER 289
Query: 206 DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS-ILGKSI 264
+ +W+T+I AL+ A+ +Y R V + +T + + C + ++ IL + I
Sbjct: 290 NEYTWSTMIAALSHGGRIDAAIAVYERDPVKSI-ACRTALITGLAQCGRIDDARILFEQI 348
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-S 323
+ V +AL+ Y + + A F ++ +N +SW +I GYA S
Sbjct: 349 PEPI--------VVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRS 400
Query: 324 PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSL 379
++ LL EL + G P+ + + + + L Q+H L +++G + + +L
Sbjct: 401 EEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNAL 460
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+T Y K + A + + + + +V N + +E + D VSW
Sbjct: 461 ITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSW 519
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+I+A AH E + FK M P++ LL C L +G +H + K
Sbjct: 520 TTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIK 579
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+ S+ V N LI MY KCG S +IF+ M +R++ TW +I+ +G + A++
Sbjct: 580 LGM-DSELIVANALISMYFKCGC-ADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIK 637
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
++ ME G P+ V + +L AC H GLV EG + F+ M++ YG+ P +HY C+VDLL
Sbjct: 638 MYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLL 697
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G ++ AE+ I MP P+ +IW L C+
Sbjct: 698 GRTGDVQGAEQFIYDMPIEPDTVIWSALLGACK 730
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/542 (23%), Positives = 235/542 (43%), Gaps = 72/542 (13%)
Query: 86 GRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF-----CELVRSEVALT 140
GR G + E VF+ MPR+ ++ WNS++S + +G + L+ + + L+
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLS 104
Query: 141 ESSFVG-------VIHGLSNEQDLEFGEQIHGLVIKNG--------FD----YELLVANS 181
+G V G+ + + I ++NG FD ++ NS
Sbjct: 105 GYGRLGRVLEARRVFDGMLERNTVAWNAMI-SCYVQNGDITMARRLFDAMPSRDVSSWNS 163
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
++ Y + A +F+ + R++VSW +I EN GKA +++ +M + + P+
Sbjct: 164 MLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPD 223
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN-LEGAHLCF 300
Q+ F +++ GL N + +S+ +K E DV +G+A+++ Y++ + L+ A F
Sbjct: 224 QSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFF 283
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ- 359
+ +N +W+ +I SH R A + +
Sbjct: 284 ESMIERNEYTWSTMIAA---------------------------LSHGGRIDAAIAVYER 316
Query: 360 --LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+ + R +L+T A+ G I DA + P V +I G Y +
Sbjct: 317 DPVKSIACRT----------ALITGLAQCGRIDDARILFEQIPEPIVVSWNALITG-YMQ 365
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G NE +L ++ + +SW +IA A NG +E L L + + + + P + S+
Sbjct: 366 NGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSI 425
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
ACS + L G+ +H L K ++F CN LI MYGKC ++ + ++F+ M ++
Sbjct: 426 FFACSNIVALETGTQVHSLAVKVG-CQFNSFACNALITMYGKCRNMEYARQVFSRMVTKD 484
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+++W + ++AL N A F M D V+ +++A H E M F+
Sbjct: 485 IVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFK 540
Query: 598 RM 599
M
Sbjct: 541 TM 542
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 109/229 (47%), Gaps = 12/229 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M R+ VS+ +IISAY+ +A+ F M P LL C SL + G
Sbjct: 511 MLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIG 570
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K G+ ++ V AL+ +Y + GC D +F+ M + + TWN+I++ + +
Sbjct: 571 QQIHTVAIKLGMD-SELIVANALISMYFKCGCADS-RRIFDLMEERDIFTWNTIITGYAQ 628
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG + + ++ + + V E +FVG+++ S+ ++ G + + + DY L
Sbjct: 629 HGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQ---DYGLTP 685
Query: 179 ANS----LVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESEN 222
+V++ + + AE+ D+ I D V W+ ++GA +N
Sbjct: 686 LPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKN 734
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 62/141 (43%), Gaps = 10/141 (7%)
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
C+ I G+ G +G + ++F+ M R++I W ++ISA NG A + + +
Sbjct: 37 CSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM 96
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
+ + +L+ G V E +F+ M +E ++ ++ V+ G + A
Sbjct: 97 RTGAI----LLSGYGRLGRVLEARRVFDGM-----LERNTVAWNAMISCYVQNGDITMAR 147
Query: 630 KIITTMPFPPNALIWRTFLEG 650
++ MP + W + L G
Sbjct: 148 RLFDAMP-SRDVSSWNSMLTG 167
>gi|297738941|emb|CBI28186.3| unnamed protein product [Vitis vinifera]
Length = 760
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 179/657 (27%), Positives = 326/657 (49%), Gaps = 68/657 (10%)
Query: 2 PDRNVVSFN-SIISAYSRCGYVEDALRMFLYMINRGF--EPTQFTFGGLLSCDSLNPVEG 58
P + S N S+++A R +E AL +F + GF Q T +L + G
Sbjct: 39 PQTTIASLNRSMLTALRRNLSLE-ALDLFKKQLQWGFVGNIDQVTVAIVLKACCGDSKLG 97
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ A + +G F + V +L+ +Y + G D + VFE++ +V+WN+++S F +
Sbjct: 98 CQIHAFAISSG-FISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQR 156
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+D + + + VA + V+ S+ + FG Q+H ++K G D E+ V
Sbjct: 157 S---DDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFV 213
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+L+ MY +C + A + +E A+ ++L M + +
Sbjct: 214 GNALITMYSRCCRLVEARRGNSGLE----------------------AILVFLEMLKEGM 251
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ +F I++C + LG+ IH+ +K + V V + L+ Y+KC+++E A L
Sbjct: 252 KLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKL 311
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F I ++N+VSW +I S+ TS+F E+ + G PN+ TF ++
Sbjct: 312 VFESIIDRNVVSWTTMI--SISEEDATSLF--NEMRRDGVYPNDVTFVGLI--------- 358
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
H + ++ E + + G + + +F++ LN+ +N + +Y +
Sbjct: 359 --HAITMKNLVEEGQMIHGVCVKT-----------SFLSELNV------SNSLITMYAKF 399
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF-KYMRAARIYPDNYTFVSL 477
++++K+ +L +I+SWN +I+ A NG ++E L+ F + +R P+ +TF S+
Sbjct: 400 ESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMESR--PNEFTFGSV 457
Query: 478 LS--ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
LS A ++ ++ G H I K + +++ V + L+DMY K GSI S+ +F+E
Sbjct: 458 LSSIASAEAISMRHGQRCHSHILKLGL-NTNPIVSSALLDMYAKRGSICESLGVFSETPL 516
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+N + WTA+ISA +G + + F++ME G KPD + +AV+TAC G+V G +L
Sbjct: 517 KNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQL 576
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
F M + + +EP +HY +VD+L R G LKEAE+ + +P + ++ L C+
Sbjct: 577 FNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACR 633
>gi|75274055|sp|Q9LT48.1|PP244_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g20730
gi|9294399|dbj|BAB02480.1| unnamed protein product [Arabidopsis thaliana]
gi|51971823|dbj|BAD44576.1| unknown protein [Arabidopsis thaliana]
Length = 565
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 149/499 (29%), Positives = 249/499 (49%), Gaps = 40/499 (8%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
IHG I NGF L + + L+++Y + + A K+F + RDVVSW +I +
Sbjct: 35 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 94
Query: 223 FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSA 282
AL L+ M + V NQ T+ V+ SC L G IH V K ++ V SA
Sbjct: 95 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 154
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL-LQLGYRPN 341
L+ YA+C +E A L F + +++VSWNA+I GY + + + F L +L L G +P+
Sbjct: 155 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 214
Query: 342 EFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
FTF +LR+S+ + L+ LH L I++G+ ++ SL+ +Y K G +++A
Sbjct: 215 CFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAW---- 270
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA-CAHNGDYKEVL 456
KL ++ D++S +I N +
Sbjct: 271 ----------------------------KLHEGTKKRDLLSCTALITGFSQQNNCTSDAF 302
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
++FK M + D S+L C+ + ++ +G +HG K+ I D + N LIDM
Sbjct: 303 DIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDM 362
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y K G I +V F EM +++V +WT+LI+ G +G ++A++ + ME KP+ V
Sbjct: 363 YAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTF 422
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+++L+AC H G G ++++ M +G+E +H C++D+L R G+L+EA +I +
Sbjct: 423 LSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKE 482
Query: 637 --FPPNALIWRTFLEGCQR 653
++ W FL+ C+R
Sbjct: 483 GIVSLSSSTWGAFLDACRR 501
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 208/416 (50%), Gaps = 27/416 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
+ R+VVS+ ++IS +SRCGY DAL +F M + QFT+G +L SC L + EG
Sbjct: 74 ISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEG 133
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ SV K G + V +ALL LY R G ++E F+ M + LV+WN+++ +
Sbjct: 134 MQIHGSVEK-GNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTA 192
Query: 119 HGFVEDCMFLFCELVRSEVALTES------SFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+ + LF ++ LTE +F ++ + LE ++HGL IK GF
Sbjct: 193 NACADTSFSLF------QLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGF 246
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN-FGKALELYL 231
+ SLVN Y +C + +A K+ + + RD++S +I ++ N A +++
Sbjct: 247 GRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFK 306
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKC 290
M ++ ++ C + + +G+ IH +K++ + DV +G++L+D YAK
Sbjct: 307 DMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKS 366
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTF---- 345
+E A L F E+ K++ SW +LI GY + +I L + +PN+ TF
Sbjct: 367 GEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLL 426
Query: 346 ---SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
SH ++ L +++ +I + G E E L ++ A+SG + +A A + +
Sbjct: 427 SACSHTGQTELGWKIYD--TMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRS 480
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 243/524 (46%), Gaps = 47/524 (8%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ + + NG FC++ + L+ LY + G + +F+ + ++ +V+W +++S F + G
Sbjct: 35 IHGNSITNG-FCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 93
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ D + LF E+ R +V + ++ V+ + L+ G QIHG V K L+V +
Sbjct: 94 YHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS 153
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L+++Y +C + A F ++ RD+VSWN +I + + L+ M + P
Sbjct: 154 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKP 213
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ TF ++ + ++ + +H IK + +LV+ Y KC +L A
Sbjct: 214 DCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLH 273
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLI--ELLQLGYRPNEFTFSHVLR--SSLAFQ 356
++++S ALI G++ +++ TS I +++++ + +E S +L+ +++A
Sbjct: 274 EGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASV 333
Query: 357 LL--QLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIA 412
+ Q+H ++ ++ LG SL+ YAKSG I DA LAF
Sbjct: 334 TIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAF----------------- 376
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+++ D+ SW +IA +G++++ ++L+ M RI P++
Sbjct: 377 ----------------EEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDV 420
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF+SLLSACS LG ++ + I + + +IDM + G + + +
Sbjct: 421 TFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRS 480
Query: 533 ---MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+ + TW A + A +G Q L K + L +P +
Sbjct: 481 KEGIVSLSSSTWGAFLDACRRHGNVQ--LSKVAATQLLSMEPRK 522
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 161/324 (49%), Gaps = 12/324 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCD----SLNPV 56
M +R++VS+N++I Y+ + + +F M+ G +P FTFG LL L V
Sbjct: 175 MKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIV 234
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
++L +K G + A + +L+ Y + G L + E ++ L++ ++++ F
Sbjct: 235 --SELHGLAIKLGFGRSSALI-RSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGF 291
Query: 117 GKH-GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDY 174
+ D +F +++R + + E ++ + + G QIHG +K+ +
Sbjct: 292 SQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRF 351
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ + NSL++MY + I A F++++ +DV SW ++I NF KA++LY RM
Sbjct: 352 DVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRME 411
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI-KNALECDVFVGSALVDFYAKCDNL 293
+ + PN TF+ ++++C+ + LG I+ +I K+ +E S ++D A+ L
Sbjct: 412 HERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYL 471
Query: 294 EGAHLCFSEISNKNIVSWNALILG 317
E A+ S + IVS ++ G
Sbjct: 472 EEAYALIR--SKEGIVSLSSSTWG 493
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 250/492 (50%), Gaps = 33/492 (6%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
+H VIK+GF Y L + L++ Y +C + A K+F ++ R +V+WN++I +
Sbjct: 23 VHTNVIKSGFSYSFL-GHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGK 81
Query: 223 FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC-DVFVGS 281
+A+E Y M ++ V P+ TF + + + L G+ H + LE D FV S
Sbjct: 82 SKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVAS 141
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRP 340
ALVD YAK D + AHL F + K++V + ALI+GYA + E ++ G +P
Sbjct: 142 ALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKP 201
Query: 341 NEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
NE+T L C++I G LG L+ GL+ +
Sbjct: 202 NEYT---------------LACILINCGN------LGDLVNGQLIHGLVVKS-------G 233
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
+ V + +Y+R +++K+ +QL+ + V+W + NG + + +F+
Sbjct: 234 LESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFR 293
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M I P+ +T S+L ACS L L +G +H + K + + + LI++YGKC
Sbjct: 294 EMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGL-DGNKYAGAALINLYGKC 352
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
G++ + +F+ +T+ +V+ ++I A NGF ALE F ++ +G P+ V I++L
Sbjct: 353 GNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISIL 412
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
AC + GLV EG ++F + ++ +E +DH+ C++DLL R L+EA +I + P+
Sbjct: 413 LACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPD 471
Query: 641 ALIWRTFLEGCQ 652
++WRT L C+
Sbjct: 472 VVLWRTLLNSCK 483
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/515 (24%), Positives = 255/515 (49%), Gaps = 47/515 (9%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ +V+K+G + +F+G L+ Y + G L E +F+++P + +VTWNS++S HG
Sbjct: 23 VHTNVIKSGF--SYSFLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHG 80
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD-YELLVA 179
++ + + ++ V +F + S + G++ HGL + G + + VA
Sbjct: 81 KSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVA 140
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
++LV+MY + + A +F+ V +DVV + +I A+ G+AL+++ M V
Sbjct: 141 SALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVK 200
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN+ T ++ +C L + + G+ IH V+K+ LE V ++L+ Y++C+ +E +
Sbjct: 201 PNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKV 260
Query: 300 FSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F+++ N V+W + ++G ++ + E+++ PN FT S +L++ + +L
Sbjct: 261 FNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAML 320
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
Q+H + +++G + +Y +L+ Y K G N+ +A
Sbjct: 321 EVGEQIHAITMKLGLDGNKYAGAALINLYGKCG------------NMDKA---------- 358
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
+L++L D+V+ N +I A A NG E LELF+ ++ + P+ TF
Sbjct: 359 -------RSVFDVLTEL---DVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTF 408
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+S+L AC+ + G + I+ I + D F C +ID+ G+ + + + E
Sbjct: 409 ISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTC--MIDLLGRSRRLEEAAMLIEE 466
Query: 533 MTDRNVITWTALISALGLNG---FAQRALEKFREM 564
+ + +V+ W L+++ ++G A++ + K E+
Sbjct: 467 VRNPDVVLWRTLLNSCKIHGEVEMAEKVMSKILEL 501
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 211/454 (46%), Gaps = 30/454 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
+P R++V++NS+IS++ G ++A+ + M+ G P +TF + S + G
Sbjct: 61 LPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHG 120
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + GL D FV +AL+ +Y + + + VF + K +V + +++ + +
Sbjct: 121 QRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQ 180
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG + + +F ++V V E + ++ N DL G+ IHGLV+K+G + +
Sbjct: 181 HGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVAS 240
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SL+ MY +C I + K+F ++ + V+W + + L ++ A+ ++ M +
Sbjct: 241 QTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSI 300
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T ++ +C+ L +G+ IHA +K L+ + + G+AL++ Y KC N++ A
Sbjct: 301 SPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARS 360
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQL 357
F ++ ++V+ N++I YA L E L+ +G PN TF +L + L
Sbjct: 361 VFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGL 420
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
++ C I N+ NI + + + R
Sbjct: 421 VEEGCQIFASIRNNH---------------------------NIELTIDHFTCMIDLLGR 453
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
+ + E L+ ++ PD+V W ++ +C +G+
Sbjct: 454 SRRLEEAAMLIEEVRNPDVVLWRTLLNSCKIHGE 487
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 142/429 (33%), Positives = 229/429 (53%), Gaps = 17/429 (3%)
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
MS P +F + S + L + HA ++K+ L F S L+ + +
Sbjct: 1 MSSSFPPPPILSFAEMATSISELHQA------HAHILKSGLIHSTFAASRLIASVSTNSH 54
Query: 293 LEG---AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHV 348
+ AH FS I N N WN +I YA+ +P + + ++L P+++TF+
Sbjct: 55 AQAIPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFA 114
Query: 349 LRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
L+S +F + Q+H +++ G + ++ +L+ YA G I DA + + + R
Sbjct: 115 LKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRM-LERD 173
Query: 405 VVPANIIAGIYNRTGQYN-ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
VV N + Y G + ++ + ++VSWN +I +H G + EVL LF+ M+
Sbjct: 174 VVSWNALLSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQ 233
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
A + PDN T VS+LSAC+ + L+ G +H I K I S D FV L+DMY KCGSI
Sbjct: 234 HAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGI-SIDGFVATALVDMYSKCGSI 292
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
++++FN +++ TW ++IS L +G Q AL+ F EM GFKP+ V + VL+AC
Sbjct: 293 EKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSAC 352
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
GL+ EG E+F M +G++P ++HY C+VDLL R G L+EAE+++ MP +++
Sbjct: 353 SRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVV 412
Query: 644 WRTFLEGCQ 652
W + L C+
Sbjct: 413 WESLLGACR 421
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 206/460 (44%), Gaps = 55/460 (11%)
Query: 60 QLQASVLKNGL----FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
Q A +LK+GL F A + + + + + S+F +P + WN+I+
Sbjct: 25 QAHAHILKSGLIHSTFAASRLIASVSTNSHAQ--AIPYAHSIFSRIPNPNSYMWNTIIRA 82
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ E + +F +++ + V + +F + + +E G QIHG V+K G +
Sbjct: 83 YANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDD 142
Query: 176 LLVANSLVNMYFQCAGI-----------------WSA---------------EKMFKDVE 203
L + N+L+++Y C I W+A ++F +
Sbjct: 143 LFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELASRRVFGETP 202
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
+++VVSWN +I + + F + L L+ M V P+ T V V+++CA + G+
Sbjct: 203 VKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEW 262
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-S 322
+HA + KN + D FV +ALVD Y+KC ++E A F+ K+I +WN++I G ++ S
Sbjct: 263 VHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGS 322
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ---------LHCLIIRMGYENYE 373
++ + E+L G++PNE TF VL + LL +H I+ E+Y
Sbjct: 323 GQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHY- 381
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY---NETVKLLSQ 430
G ++ + GL+ +A V + A V + G G + L +
Sbjct: 382 ---GCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLE 438
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
L + S+ + A G +K+V+E+ + MRA + D
Sbjct: 439 LSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKD 478
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 187/425 (44%), Gaps = 32/425 (7%)
Query: 162 QIHGLVIKNGFDYELLVANSL---VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
Q H ++K+G + A+ L V+ I A +F + + WNTII A A
Sbjct: 25 QAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNTIIRAYA 84
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
S AL ++ +M V P++ TF + + SC G+ IH V+K L D+F
Sbjct: 85 NSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLF 144
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK------------SSPTS 326
+ + L+ YA C +E A + +++VSWNAL+ YA + +P
Sbjct: 145 IQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELASRRVFGETPVK 204
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
+ + GY + FS VL + F+ +Q G + L S++++ A
Sbjct: 205 NVVSWNAMITGYS-HAGRFSEVL---VLFEDMQ------HAGVKPDNCTLVSVLSACAHV 254
Query: 387 GLISDA---LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
G +S A++ I A + +Y++ G + +++ + R DI +WN +I
Sbjct: 255 GALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSII 314
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
+ + +G + L++F M P+ TFV +LSACS+ L G + L+ I
Sbjct: 315 SGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGI 374
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV-ITWTALISALGLNG---FAQRALE 559
++D+ G+ G + + ++ +M + + W +L+ A +G A+R +
Sbjct: 375 QPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQ 434
Query: 560 KFREM 564
K E+
Sbjct: 435 KLLEL 439
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 166/355 (46%), Gaps = 45/355 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
+P+ N +N+II AY+ E AL +F M++ P ++TF L SC S + VE G
Sbjct: 68 IPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEG 127
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ VLK GL D F+ L+ LY GC+++ + + M + +V+WN+++S + +
Sbjct: 128 RQIHGHVLKTGL-GDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAE 186
Query: 119 HGFVE--------------------------------DCMFLFCELVRSEVALTESSFVG 146
G +E + + LF ++ + V + V
Sbjct: 187 RGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVS 246
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
V+ ++ L GE +H + KNG + VA +LV+MY +C I A ++F +D
Sbjct: 247 VLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKD 306
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC--AGLQN---SILG 261
+ +WN+II L+ + AL+++ M V+ PN+ TFV V+++C AGL + +
Sbjct: 307 ISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFN 366
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI-VSWNALI 315
+H I+ +E +VD + LE A ++ K V W +L+
Sbjct: 367 LMVHVHGIQPTIEHY----GCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLL 417
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 131/258 (50%), Gaps = 6/258 (2%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGA 59
P +NVVS+N++I+ YS G + L +F M + G +P T +LS C + + +G
Sbjct: 202 PVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGE 261
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ A + KNG+ D FV TAL+ +Y + G +++ + VF RK + TWNSI+S H
Sbjct: 262 WVHAYIDKNGI-SIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTH 320
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYELLV 178
G + + +F E++ E +FV V+ S L+ G ++ L++ +G +
Sbjct: 321 GSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEH 380
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDV-VSWNTIIGALAESENFGKALELYLRMSVDI 237
+V++ + + AE++ + + ++ V W +++GA N A + ++ +++
Sbjct: 381 YGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKL-LEL 439
Query: 238 VFPNQTTFVYVINSCAGL 255
++FV + N A +
Sbjct: 440 SPQESSSFVQLSNMYASM 457
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 144/495 (29%), Positives = 246/495 (49%), Gaps = 39/495 (7%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
+Q+H ++K+ +L V L++ + C + A F V+ +V +NT+I A + +
Sbjct: 37 KQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQYPNVHLYNTMIRAHSHN 96
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
+A + M D + + TF +++ C G + +S+HA++ K DVFV
Sbjct: 97 SQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSDVFVP 156
Query: 281 SALVDFYAKCDN--LEGAHLCFSEI-SNKNIVSWNALILGYASKSSPTSIFLLIELLQLG 337
++L+D Y+KC + + A F + + +++VSWN++I G A
Sbjct: 157 NSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGL-------------- 202
Query: 338 YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
Y F + E +++ Y K G + DA
Sbjct: 203 YEEARKVFDEM--------------------PEKDGISWNTMLDGYVKVGKMDDAFKLFD 242
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
+ V + ++ G Y + G L ++ ++VSW I+++ A G +E +
Sbjct: 243 EMPERNVVSWSTMVLG-YCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAIS 301
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
LF M A + DN T +S+L+AC++ L LG +H IK + T + N L+DMY
Sbjct: 302 LFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCT-TEISNALVDMY 360
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
KCG + + +FN++ +++V++W A++ L ++G +ALE F+ M+ GF P++V +I
Sbjct: 361 AKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMI 420
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
VL AC H GL+ +G+ F M R Y + PE++HY C+VDLL R G L+EA ++I MP
Sbjct: 421 GVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPM 480
Query: 638 PPNALIWRTFLEGCQ 652
PNA+IW T L C+
Sbjct: 481 APNAIIWGTLLGACR 495
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 211/487 (43%), Gaps = 55/487 (11%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLN---PVEGAQL 61
NV +N++I A+S A F M G FTF LL + N PV + +
Sbjct: 82 NVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIES-V 140
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGC--LDEVVSVFEDM-PRKSLVTWNSIVSIFGK 118
A + K G F +D FV +L+ Y + G + +F M R+ +V+WNS++S K
Sbjct: 141 HAQIEKFG-FMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAK 199
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E+ +F E+ + + G + + + +++ + ++
Sbjct: 200 GGLYEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMP--------ERNVVS 251
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+++V Y + + A +F + ++++VSW I+ AE +A+ L+ +M +
Sbjct: 252 WSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACL 311
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ T + ++ +CA LG+ IHA + N +C + +ALVD YAKC L A+
Sbjct: 312 KLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYD 371
Query: 299 CFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F++I NK++VSWNA++ G A ++ L + + G+ PN+ T VL
Sbjct: 372 VFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVL-------- 423
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAG 413
+ +GLI D + + + + +VP +
Sbjct: 424 -----------------------CACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVD 460
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+ R G+ E ++L+ + P+ + W ++ AC + + E+ ++ + P +
Sbjct: 461 LLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHNAVELAREVLDHL--VELEPTDS 518
Query: 473 TFVSLLS 479
S+LS
Sbjct: 519 GNFSMLS 525
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
+ +++VVS+N+++ + G+ AL +F M GF P + T G+L +C + +G
Sbjct: 376 IKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDG 435
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
+ +++ ++ + ++ L GR G L+E + + +MP + + W +++
Sbjct: 436 IRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACR 495
Query: 118 KHGFVE 123
H VE
Sbjct: 496 MHNAVE 501
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 174/665 (26%), Positives = 309/665 (46%), Gaps = 84/665 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M +N V+ NS+ISA+++ G + DA ++F M R L D +
Sbjct: 41 MTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVE------ 94
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIVSIFGKH 119
+A L + + D + T ++ Y R+G L + ++F +P K + V N++V+ + K+
Sbjct: 95 -EARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKN 153
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
++ LF + ++ S+ ++ G + ++ G Q
Sbjct: 154 RQFDEARRLFDAMPAKDLV----SWNSMLTGYTRNGEMRLGLQF---------------- 193
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
F+++ RDVVSWN ++ E + + E + ++
Sbjct: 194 -------------------FEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKI------ 228
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC-DVFVGSALVDFYAKCDNLEGAHL 298
PN T +V C + GK A+ + + + +V +A++ Y + +++ A
Sbjct: 229 PNPNTVSWVTMLCGFAR---FGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAIS 285
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F E+ KN +SW +I GY L+ Q+ YR ++A Q
Sbjct: 286 LFMEMPEKNSISWTTVINGYVRMGKLDEARQLLN--QMPYR------------NVAAQTA 331
Query: 359 QLHCLIIRMGYENYEYVLG-----------SLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ + ++ + +++ Y++ G + +AL + + + +V
Sbjct: 332 MISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQM-VKKDIVS 390
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
N + Y + GQ + +K+ +++ +IVSWN +I+ NG Y + L+ F M
Sbjct: 391 WNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQ 450
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD TF LS+C+ L L +G LH L+ K+ ++D FV N LI MY KCGSI S+
Sbjct: 451 KPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGY-ATDLFVSNALITMYAKCGSISSAE 509
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+F ++ +V++W +LI+A LNG + AL+ F +ME G PD V + +L+AC H G
Sbjct: 510 LLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVG 569
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
L+ +G++LF+ M ++Y +EP +HY C+VDLL R G L+EA +++ M NA IW
Sbjct: 570 LIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGAL 629
Query: 648 LEGCQ 652
L C+
Sbjct: 630 LGACR 634
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
S F N+ I GK G I ++K+F MT +N +T ++ISA NG A + F M
Sbjct: 13 SYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGM 72
Query: 565 EFLGFKPDR--VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH--CVVDLLV 620
P R V+ +++ A H V E +LF++M P D Y ++
Sbjct: 73 ------PQRNIVSWNSMIAAYLHNDRVEEARQLFDKM-------PTRDLYSWTLMITCYT 119
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
R G L +A + +P+ N + + G + R
Sbjct: 120 RNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNR 154
>gi|15232344|ref|NP_188709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|38564272|gb|AAR23715.1| At3g20730 [Arabidopsis thaliana]
gi|332642896|gb|AEE76417.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 564
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 149/499 (29%), Positives = 249/499 (49%), Gaps = 40/499 (8%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
IHG I NGF L + + L+++Y + + A K+F + RDVVSW +I +
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 223 FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSA 282
AL L+ M + V NQ T+ V+ SC L G IH V K ++ V SA
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIEL-LQLGYRPN 341
L+ YA+C +E A L F + +++VSWNA+I GY + + + F L +L L G +P+
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 342 EFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
FTF +LR+S+ + L+ LH L I++G+ ++ SL+ +Y K G +++A
Sbjct: 214 CFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAW---- 269
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA-CAHNGDYKEVL 456
KL ++ D++S +I N +
Sbjct: 270 ----------------------------KLHEGTKKRDLLSCTALITGFSQQNNCTSDAF 301
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
++FK M + D S+L C+ + ++ +G +HG K+ I D + N LIDM
Sbjct: 302 DIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDM 361
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y K G I +V F EM +++V +WT+LI+ G +G ++A++ + ME KP+ V
Sbjct: 362 YAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTF 421
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+++L+AC H G G ++++ M +G+E +H C++D+L R G+L+EA +I +
Sbjct: 422 LSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKE 481
Query: 637 --FPPNALIWRTFLEGCQR 653
++ W FL+ C+R
Sbjct: 482 GIVSLSSSTWGAFLDACRR 500
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 208/416 (50%), Gaps = 27/416 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
+ R+VVS+ ++IS +SRCGY DAL +F M + QFT+G +L SC L + EG
Sbjct: 73 ISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEG 132
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ SV K G + V +ALL LY R G ++E F+ M + LV+WN+++ +
Sbjct: 133 MQIHGSVEK-GNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTA 191
Query: 119 HGFVEDCMFLFCELVRSEVALTES------SFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+ + LF ++ LTE +F ++ + LE ++HGL IK GF
Sbjct: 192 NACADTSFSLF------QLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGF 245
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN-FGKALELYL 231
+ SLVN Y +C + +A K+ + + RD++S +I ++ N A +++
Sbjct: 246 GRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFK 305
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKC 290
M ++ ++ C + + +G+ IH +K++ + DV +G++L+D YAK
Sbjct: 306 DMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKS 365
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTF---- 345
+E A L F E+ K++ SW +LI GY + +I L + +PN+ TF
Sbjct: 366 GEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLL 425
Query: 346 ---SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
SH ++ L +++ +I + G E E L ++ A+SG + +A A + +
Sbjct: 426 SACSHTGQTELGWKIYD--TMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRS 479
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 243/524 (46%), Gaps = 47/524 (8%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ + + NG FC++ + L+ LY + G + +F+ + ++ +V+W +++S F + G
Sbjct: 34 IHGNSITNG-FCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 92
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ D + LF E+ R +V + ++ V+ + L+ G QIHG V K L+V +
Sbjct: 93 YHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS 152
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L+++Y +C + A F ++ RD+VSWN +I + + L+ M + P
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKP 212
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ TF ++ + ++ + +H IK + +LV+ Y KC +L A
Sbjct: 213 DCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLH 272
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLI--ELLQLGYRPNEFTFSHVLR--SSLAFQ 356
++++S ALI G++ +++ TS I +++++ + +E S +L+ +++A
Sbjct: 273 EGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASV 332
Query: 357 LL--QLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIA 412
+ Q+H ++ ++ LG SL+ YAKSG I DA LAF
Sbjct: 333 TIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAF----------------- 375
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+++ D+ SW +IA +G++++ ++L+ M RI P++
Sbjct: 376 ----------------EEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDV 419
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF+SLLSACS LG ++ + I + + +IDM + G + + +
Sbjct: 420 TFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRS 479
Query: 533 ---MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+ + TW A + A +G Q L K + L +P +
Sbjct: 480 KEGIVSLSSSTWGAFLDACRRHGNVQ--LSKVAATQLLSMEPRK 521
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 161/324 (49%), Gaps = 12/324 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCD----SLNPV 56
M +R++VS+N++I Y+ + + +F M+ G +P FTFG LL L V
Sbjct: 174 MKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIV 233
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
++L +K G + A + +L+ Y + G L + E ++ L++ ++++ F
Sbjct: 234 --SELHGLAIKLGFGRSSALI-RSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGF 290
Query: 117 GKH-GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDY 174
+ D +F +++R + + E ++ + + G QIHG +K+ +
Sbjct: 291 SQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRF 350
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ + NSL++MY + I A F++++ +DV SW ++I NF KA++LY RM
Sbjct: 351 DVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRME 410
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI-KNALECDVFVGSALVDFYAKCDNL 293
+ + PN TF+ ++++C+ + LG I+ +I K+ +E S ++D A+ L
Sbjct: 411 HERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYL 470
Query: 294 EGAHLCFSEISNKNIVSWNALILG 317
E A+ S + IVS ++ G
Sbjct: 471 EEAYALIR--SKEGIVSLSSSTWG 492
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 154/496 (31%), Positives = 245/496 (49%), Gaps = 36/496 (7%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNM-YFQCAG-IWSAEKMFKDVEIRDVVSWNTIIGALA 218
+QIH +++ G ++ A+ +V Q +G + A +F + + N+II
Sbjct: 5 KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ +AL Y M V + P++ TF + SC +NS GK IH K D +
Sbjct: 65 DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNSSEGKQIHCHSTKLGFASDTY 121
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG- 337
+ L++ Y+ C L A F ++ +K +VSW +I +A P L + +
Sbjct: 122 AQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSE 181
Query: 338 -YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
+PNE T +VL + + L ++ R+ +EY+ D F
Sbjct: 182 NVKPNEVTLVNVLTACARARDL---AMVKRI----HEYI---------------DEHGF- 218
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
R VV ++ +Y + G L + + ++ SWNI+I + +Y+E L
Sbjct: 219 -----GRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEAL 273
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
LF+ M+ I D T SLL AC+ L L LG LH IKK I D + L+DM
Sbjct: 274 LLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQR-IDVDVALGTALVDM 332
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y KCGSI +++++F+EM +++V+TWTALI L + G A+ AL+ F EM G KPD +
Sbjct: 333 YAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITF 392
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+ VL AC H G V EG+ F M+ +YG++P ++HY +VD+L R G + EAE++I +MP
Sbjct: 393 VGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMP 452
Query: 637 FPPNALIWRTFLEGCQ 652
P+ + L C+
Sbjct: 453 MAPDQFVLGGLLGACR 468
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 183/352 (51%), Gaps = 6/352 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+P+ + NSII + ++AL + M+ +G P ++TF L SC N EG
Sbjct: 48 IPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCR--NSSEGK 105
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ K G F +D + L+ +Y GCL VF+ M K++V+W +++ + +
Sbjct: 106 QIHCHSTKLG-FASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQW 164
Query: 120 GFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + LF +++SE V E + V V+ + +DL ++IH + ++GF +++
Sbjct: 165 DQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVL 224
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
L+++Y +C + A +F + +++ SWN +I E N+ +AL L+ M +
Sbjct: 225 NTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGI 284
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
++ T ++ +C L LGK +HA + K ++ DV +G+ALVD YAKC ++E A
Sbjct: 285 KGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQ 344
Query: 299 CFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL 349
F E+ K++++W ALILG A + ++ E+ G +P+ TF VL
Sbjct: 345 VFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVL 396
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 126/255 (49%), Gaps = 2/255 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI-NRGFEPTQFTFGGLLS-CDSLNPVEG 58
M D+ VVS+ ++I +++ +A+R+F M+ + +P + T +L+ C +
Sbjct: 146 MEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAM 205
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + F + T L+ +Y + GC+ +F+ K+L +WN +++ +
Sbjct: 206 VKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVE 265
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
E+ + LF E+ + + + ++ ++ LE G+ +H + K D ++ +
Sbjct: 266 DSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVAL 325
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+LV+MY +C I +A ++F ++ +DV++W +I LA AL+ + M + V
Sbjct: 326 GTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGV 385
Query: 239 FPNQTTFVYVINSCA 253
P+ TFV V+ +C+
Sbjct: 386 KPDAITFVGVLAACS 400
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQL 61
++N+ S+N +I+ + E+AL +F M +G + + T LL +C L +E +
Sbjct: 250 EKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKW 309
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ +K D +GTAL+ +Y + G ++ + VF +MP K ++TW +++ G
Sbjct: 310 LHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQ 369
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
E+ + F E+ V +FVGV+ S+
Sbjct: 370 AENALQYFDEMHIKGVKPDAITFVGVLAACSH 401
>gi|356540705|ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g50420-like [Glycine max]
Length = 715
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/617 (26%), Positives = 307/617 (49%), Gaps = 47/617 (7%)
Query: 47 LLSCDSLNPV-EGAQLQASVLKN--GLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR 103
L C ++ + E QL A +L FV +L +Y R G L + VF+ MPR
Sbjct: 17 LQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKMPR 76
Query: 104 KSLVTWNSIVSIFGKHG--FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGE 161
+++V++N++++ + + + L+ ++V + + + ++F ++ S + FG
Sbjct: 77 RTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWWFGS 136
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
+H K G + ++ + SL+NMY C + SAE +F D+ RD V+WN++I ++
Sbjct: 137 SLHAKGFKLGLN-DICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLKNN 195
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
+ + L+++M P Q T+ V+NSC+ L++ G+ IHA VI + D+ + +
Sbjct: 196 KIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHLQN 255
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGY-R 339
ALVD Y N++ A+ FS + N ++VSWN++I GY+ ++ ++ L ++L ++ + +
Sbjct: 256 ALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCFPK 315
Query: 340 PNEFTFSHVLRSSLAFQL----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
P+++T++ ++ ++ F LH +I+ G+E
Sbjct: 316 PDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFE------------------------- 350
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
R+V + + +Y + + + ++ + D+V W +I + D
Sbjct: 351 -------RSVFVGSTLVSMYFKNHESDAAWRVFCSISVKDVVLWTEMITGYSKMTDGICA 403
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
+ F M D+Y +++AC+ L L G +H K + V LID
Sbjct: 404 IRCFFQMVHEGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAVKLGY-DVEMSVSGSLID 462
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY K GS+ ++ +F+++++ ++ W +++ +G + AL+ F E+ G PD+V
Sbjct: 463 MYAKNGSLEAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGLIPDQVT 522
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+++L+AC H LV +G L+ MN S G+ P + HY C+V L R L+EAE+II
Sbjct: 523 FLSLLSACSHSRLVEQGKFLWNYMN-SIGLIPGLKHYSCMVTLFSRAALLEEAEEIINKS 581
Query: 636 PFPPNAL-IWRTFLEGC 651
P+ + L +WRT L C
Sbjct: 582 PYIEDNLELWRTLLSAC 598
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 161/565 (28%), Positives = 281/565 (49%), Gaps = 51/565 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCG--YVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPV 56
MP R +VS+N++++AYSR + AL ++ M+ G P+ TF LL SL +
Sbjct: 74 MPRRTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWW 133
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G+ L A K GL D + T+LL +Y G L VF DM + V WNS++ +
Sbjct: 134 FGSSLHAKGFKLGL--NDICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGY 191
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
K+ +E+ ++LF +++ A T+ ++ V++ S +D G IH VI +L
Sbjct: 192 LKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDL 251
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ N+LV+MY + +A ++F +E D+VSWN++I +E+E+ KA+ L++++ +
Sbjct: 252 HLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQ-E 310
Query: 237 IVFPNQTTFVY--VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ FP + Y +I++ +S GKS+HA+VIK E VFVGS LV Y K +
Sbjct: 311 MCFPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESD 370
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F IS K++V W +I GY+ + +I +++ G+ +++ S V+ +
Sbjct: 371 AAWRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACA 430
Query: 354 AFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+L+ +HC +++GY+ V GSL+ YAK+G + A
Sbjct: 431 NLAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYL--------------- 475
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ SQ+ PD+ WN ++ +H+G +E L++F+ + + P
Sbjct: 476 -----------------VFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGLIP 518
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVK 528
D TF+SLLSACS + G L + +I + C ++ ++ + + + +
Sbjct: 519 DQVTFLSLLSACSHSRLVEQGKFLWNYMNSIGLIPGLKHYSC--MVTLFSRAALLEEAEE 576
Query: 529 IFNE--MTDRNVITWTALISALGLN 551
I N+ + N+ W L+SA +N
Sbjct: 577 IINKSPYIEDNLELWRTLLSACVIN 601
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/515 (24%), Positives = 251/515 (48%), Gaps = 33/515 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M DR+ V++NS+I Y + +E+ + +F+ M++ GF PTQFT+ +L SC L
Sbjct: 176 MVDRDHVAWNSLIMGYLKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSG 235
Query: 60 QL-QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+L A V+ + D + AL+ +Y G + +F M LV+WNS+++ + +
Sbjct: 236 RLIHAHVIVRNV-SLDLHLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSE 294
Query: 119 HGFVEDCMFLFCELVRSEVALTES---SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ E M LF +L E+ + ++ G+I +G+ +H VIK GF+
Sbjct: 295 NEDGEKAMNLFVQL--QEMCFPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERS 352
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V ++LV+MYF+ +A ++F + ++DVV W +I ++ + A+ + +M
Sbjct: 353 VFVGSTLVSMYFKNHESDAAWRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVH 412
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ + V+N+CA L G+ IH +K + ++ V +L+D YAK +LE
Sbjct: 413 EGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEA 472
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A+L FS++S ++ WN+++ GY+ ++ + E+L+ G P++ TF +L +
Sbjct: 473 AYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLSACSH 532
Query: 355 FQLLQ--------LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA-------L 399
+L++ ++ + + G ++Y ++T ++++ L+ +A + L
Sbjct: 533 SRLVEQGKFLWNYMNSIGLIPGLKHY----SCMVTLFSRAALLEEAEEIINKSPYIEDNL 588
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ R ++ A +I + E V L + P +V + + AA + +V E+
Sbjct: 589 ELWRTLLSACVINKNFKVGIHAAEEVLRLKAEDGPTLVLLSNLYAAAR---KWDKVAEIR 645
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
+ MR + D Y +S + A + + + G H
Sbjct: 646 RNMRGLML--DKYPGLSWIEAKNDIHVFSSGDQSH 678
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 475 VSLLSACSKLCNLALGSSLHGLI--KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+SLL CS + +L LH LI T S FV N ++ MY +CGS+ S +F++
Sbjct: 14 LSLLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDK 73
Query: 533 MTDRNVITWTALISALGLNG--FAQRALEKFREMEFLGFKPDRVALIAVLTA 582
M R ++++ AL++A A ALE + +M G +P ++L A
Sbjct: 74 MPRRTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQA 125
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/458 (31%), Positives = 237/458 (51%), Gaps = 36/458 (7%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A+ +F ++ +N++I AL+ S+ +AL LY M + P+ T+ +VI +C
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
+ G +H V+K+ ECD ++ S+L+ YA +L A F+ S +++VSWNA+
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 267
Query: 315 ILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEY 374
I GY ++ +++G+ F V R +++
Sbjct: 268 IDGY------------VKHVEMGHARMVFD-RMVCRDVISWN------------------ 296
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
+++ YA G I +A + R +V N + + + G + L S++
Sbjct: 297 ---TMINGYAIVGKIDEAKRLFDEMP-ERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCR 352
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
D+VSWN ++A A G E L LF MRA + P T VSLLSAC+ L L G LH
Sbjct: 353 DVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLH 412
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
I I ++ V L+DMY KCG I + ++FN M ++V+ W +I+ + ++G
Sbjct: 413 TYINDNRI-EVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNV 471
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHC 614
+ A + F+EM+ G +P+ + +A+L+AC H G+V EG +L + M+ SYG+EP+++HY C
Sbjct: 472 KEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGC 531
Query: 615 VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
V+DLL R G L+EA ++I TMP PN L GC+
Sbjct: 532 VIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCR 569
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 190/400 (47%), Gaps = 19/400 (4%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--GAQLQASVL 66
+NS+I A S +AL ++ M+ G +P T+ ++ + + V G + V+
Sbjct: 163 YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVV 222
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K+G C D+++ ++L+ LY L +F + +V+WN+++ + KH +
Sbjct: 223 KSGFEC-DSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHAR 281
Query: 127 FLFCELVRSEVALTESSFVG-VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
+F +V +V + G I G +E F E + L+ NS++
Sbjct: 282 MVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMP---------ERNLVSWNSMLAG 332
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
+ +C + A +F ++ RDVVSWN+++ A+ +AL L+ +M V P + T
Sbjct: 333 FVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATV 392
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
V ++++CA L G +H + N +E + VG+ALVD YAKC + A F+ + +
Sbjct: 393 VSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMES 452
Query: 306 KNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----- 359
K++++WN +I G A + + L E+ + G PN+ TF +L + ++
Sbjct: 453 KDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKL 512
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
L C+ G E G ++ A++G + +A+ + +
Sbjct: 513 LDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTM 552
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 212/465 (45%), Gaps = 50/465 (10%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
++F + +NS++ + + L+ +++S + ++ VI +
Sbjct: 150 TIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESS 209
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
FG +H V+K+GF+ + + +SL+++Y + +A+++F RDVVSWN +I
Sbjct: 210 VTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMID 269
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL-E 274
+ G A ++ RM V T +IN A I+GK AK + + + E
Sbjct: 270 GYVKHVEMGHARMVFDRMVCRDVISWNT----MINGYA-----IVGKIDEAKRLFDEMPE 320
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
++ ++++ + KC N+E A FSE+ +++VSWN+++ YA P L + +
Sbjct: 321 RNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQM 380
Query: 335 Q-LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL 393
+ +G +P E T SL+++ A G + L
Sbjct: 381 RAVGVKPTEATVV-------------------------------SLLSACAHLGALDKGL 409
Query: 394 AFVTALNIPRAVVPANIIAG-----IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
T +N R + N I G +Y + G+ + ++ + +E D+++WN +IA A
Sbjct: 410 HLHTYINDNR--IEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAI 467
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
+G+ KE +LFK M+ A + P++ TFV++LSACS + G L + + I
Sbjct: 468 HGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVE 527
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG 552
+ID+ + G + ++++ M + N AL+ ++G
Sbjct: 528 HYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHG 572
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 120/250 (48%), Gaps = 38/250 (15%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQA 63
R+V+S+N++I+ Y+ G +++A R+F M R G + C
Sbjct: 290 RDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKC------------- 336
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
G +++ +F +MP + +V+WNS+++ + + G
Sbjct: 337 -------------------------GNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPN 371
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ + LF ++ V TE++ V ++ ++ L+ G +H + N + +V +LV
Sbjct: 372 EALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALV 431
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
+MY +C I A ++F +E +DV++WNTII +A N +A +L+ M V PN
Sbjct: 432 DMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDI 491
Query: 244 TFVYVINSCA 253
TFV ++++C+
Sbjct: 492 TFVAILSACS 501
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP R+VVS+NS+++ Y++CG +AL +F M G +PT+ T LLS C L ++
Sbjct: 349 MPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKG 408
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + + ++ VGTAL+ +Y + G + VF M K ++ WN+I++ H
Sbjct: 409 LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIH 468
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI 163
G V++ LF E+ + V + +FV ++ S+ ++ G+++
Sbjct: 469 GNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKL 512
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 110/238 (46%), Gaps = 31/238 (13%)
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+ L+ P +N +I A + + E L L+ M + + PD+ T+ ++ AC++
Sbjct: 151 IFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE--- 207
Query: 487 LALGSSLHGLIKKTEIISS----DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
+ GL+ T ++ S D+++ + LI +Y +G++ ++FN + R+V++W
Sbjct: 208 --SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWN 265
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT--ACRHG----GLVREGMELF 596
A+I +G+ + M F DR+ V++ +G G + E LF
Sbjct: 266 AMI-----DGYVKHVEMGHARMVF-----DRMVCRDVISWNTMINGYAIVGKIDEAKRLF 315
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC 654
+ M E + ++ ++ V+ G++++A + + MP + + W + L +C
Sbjct: 316 DEM-----PERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPC-RDVVSWNSMLACYAQC 367
>gi|356545987|ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 613
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 240/471 (50%), Gaps = 20/471 (4%)
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM--SVDIVFPNQTTFVYVINSCAGL 255
+F + D+ +N II A + S+ AL LY +M S +FP+ TF +++ SCA L
Sbjct: 34 LFTQIPNPDLFLFNLIIRAFSLSQTPHNALSLYKKMLSSSPPIFPDTFTFPFLLKSCAKL 93
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
LG +H V K+ E +VFV +AL+ Y + A F E ++ VS+N +I
Sbjct: 94 SLPRLGLQVHTHVFKSGFESNVFVVNALLQVYFVFGDARNACRVFDESPVRDSVSYNTVI 153
Query: 316 LGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLLQ-------LHCLIIR- 366
G + ++ G+ P+E+TF +L A LL+ +H L+ R
Sbjct: 154 NGLVRAGRAGCSMRIFAEMRGGFVEPDEYTFVALLS---ACSLLEDRGIGRVVHGLVYRK 210
Query: 367 MG-YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
+G + E ++ +L+ YAK G + A V N V + Y G+
Sbjct: 211 LGCFGENELLVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVEVAR 270
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
+L Q+ D+VSW +I+ H G ++E LELF + + PD V+ LSAC++L
Sbjct: 271 RLFDQMGERDVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALSACARLG 330
Query: 486 NLALGSSLHGLIKKT--EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD--RNVITW 541
L LG +H + + + F C ++DMY KCGSI +++ +F + +D + +
Sbjct: 331 ALELGRRIHHKYDRDSWQCGHNRGFTC-AVVDMYAKCGSIEAALDVFLKTSDDMKTTFLY 389
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
+++S L +G + A+ F EM +G +PD V +A+L AC H GLV G LFE M
Sbjct: 390 NSIMSGLAHHGRGEHAMALFEEMRLVGLEPDEVTYVALLCACGHSGLVDHGKRLFESMLS 449
Query: 602 SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
YGV P+M+HY C+VDLL R GHL EA +I MPF NA+IWR L C+
Sbjct: 450 EYGVNPQMEHYGCMVDLLGRAGHLNEAYLLIQNMPFKANAVIWRALLSACK 500
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 215/499 (43%), Gaps = 80/499 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE--PTQFTFGGLL-SCDSLN-PV 56
+P+ ++ FN II A+S +AL ++ M++ P FTF LL SC L+ P
Sbjct: 38 IPNPDLFLFNLIIRAFSLSQTPHNALSLYKKMLSSSPPIFPDTFTFPFLLKSCAKLSLPR 97
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G Q+ V K+G F ++ FV ALL +Y G VF++ P + V++N++++
Sbjct: 98 LGLQVHTHVFKSG-FESNVFVVNALLQVYFVFGDARNACRVFDESPVRDSVSYNTVINGL 156
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN--GFDY 174
+ G M +F E+ V E +FV ++ S +D G +HGLV + F
Sbjct: 157 VRAGRAGCSMRIFAEMRGGFVEPDEYTFVALLSACSLLEDRGIGRVVHGLVYRKLGCFGE 216
Query: 175 ELLVANSLVNMYFQCA------------------GIWS--------------AEKMFKDV 202
L+ N+LV+MY +C W+ A ++F +
Sbjct: 217 NELLVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVEVARRLFDQM 276
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
RDVVSW +I + F +ALEL++ + + P++ V +++CA L LG+
Sbjct: 277 GERDVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALSACARLGALELGR 336
Query: 263 SIHAKVIKNALECDVFVG--SALVDFYAKCDNLEGAHLCFSEISN--KNIVSWNALILGY 318
IH K +++ +C G A+VD YAKC ++E A F + S+ K +N+++ G
Sbjct: 337 RIHHKYDRDSWQCGHNRGFTCAVVDMYAKCGSIEAALDVFLKTSDDMKTTFLYNSIMSGL 396
Query: 319 ASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLG 377
A L E ++L G P+E T+
Sbjct: 397 AHHGRGEHAMALFEEMRLVGLEPDEVTYV------------------------------- 425
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE- 432
+L+ + SGL+ ++ V P + + R G NE L+ +
Sbjct: 426 ALLCACGHSGLVDHGKRLFESMLSEYGVNPQMEHYGCMVDLLGRAGHLNEAYLLIQNMPF 485
Query: 433 RPDIVSWNIVIAACAHNGD 451
+ + V W +++AC +GD
Sbjct: 486 KANAVIWRALLSACKVDGD 504
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 127/556 (22%), Positives = 233/556 (41%), Gaps = 82/556 (14%)
Query: 74 DAFVGTALLGLYG--RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCE 131
D F+ T L+ + L +F +P L +N I+ F + + L+ +
Sbjct: 9 DPFLMTPLISFFAAANSNALHHSHLLFTQIPNPDLFLFNLIIRAFSLSQTPHNALSLYKK 68
Query: 132 LVRSEVALTESSFVG--VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
++ S + +F ++ + G Q+H V K+GF+ + V N+L+ +YF
Sbjct: 69 MLSSSPPIFPDTFTFPFLLKSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNALLQVYFVF 128
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+A ++F + +RD VS+NT+I L + G ++ ++ M V P++ TFV ++
Sbjct: 129 GDARNACRVFDESPVRDSVSYNTVINGLVRAGRAGCSMRIFAEMRGGFVEPDEYTFVALL 188
Query: 250 NSCAGLQNSILGKSIHAKVIKNALEC---DVFVGSALVDFYAKCDNLEGAHLC------- 299
++C+ L++ +G+ +H V + L C + + +ALVD YAKC LE A
Sbjct: 189 SACSLLEDRGIGRVVHGLVYRK-LGCFGENELLVNALVDMYAKCGCLEVAERVVRNGNGK 247
Query: 300 -------------------------FSEISNKNIVSWNALILGYASKSS-PTSIFLLIEL 333
F ++ +++VSW A+I GY ++ L +EL
Sbjct: 248 SGVAAWTSLVSAYALRGEVEVARRLFDQMGERDVVSWTAMISGYCHAGCFQEALELFVEL 307
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLG-------SLMTSYAKS 386
LG P+E L + L+L I Y+ + G +++ YAK
Sbjct: 308 EDLGMEPDEVVVVAALSACARLGALEL-GRRIHHKYDRDSWQCGHNRGFTCAVVDMYAKC 366
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
G I AL ++ +T +T L +N +++
Sbjct: 367 GSIEAAL-------------------DVFLKTSDDMKTTFL-----------YNSIMSGL 396
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
AH+G + + LF+ MR + PD T+V+LL AC + G L + ++
Sbjct: 397 AHHGRGEHAMALFEEMRLVGLEPDEVTYVALLCACGHSGLVDHGKRLFESMLSEYGVNPQ 456
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREME 565
++D+ G+ G + + + M + N + W AL+SA ++G + L + E
Sbjct: 457 MEHYGCMVDLLGRAGHLNEAYLLIQNMPFKANAVIWRALLSACKVDGDVE--LARLASQE 514
Query: 566 FLGFKPDRVALIAVLT 581
L + D A +L+
Sbjct: 515 LLAMENDHGARYVMLS 530
>gi|359473776|ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Vitis vinifera]
Length = 835
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 259/522 (49%), Gaps = 38/522 (7%)
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
K G +++ E+ ++V++T S+ + + L G IH + + +
Sbjct: 62 LSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPS 121
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ N L+ MY C +K+F ++ ++++VSW +I A A++ KA+ L+ M
Sbjct: 122 GSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQA 181
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ PN ++ ++ SC G LGK IH+ VI+ L ++ V +A+ + Y +C LEG
Sbjct: 182 SGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEG 241
Query: 296 AHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A L F + +N V+W L++GY +K ++ L + G +EF FS VL+
Sbjct: 242 AKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCG 301
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ Q+H I+++G E+ V L+ Y K G I A
Sbjct: 302 LEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESA------------------ 343
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
Y G+ +E P+ VSW+ +I+ + +G ++ +++F +R+ + +
Sbjct: 344 ----YRSFGRISE----------PNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLN 389
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
++ + S+ AC+ NL +GS HG K ++S + + ++ MY KCG + + + F
Sbjct: 390 SFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSY-LYGESAMVTMYSKCGRLDYARRAF 448
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + + + WTA+IS +G A AL FR M+ G +P+ V IAVLTAC H GLV
Sbjct: 449 ESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVA 508
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII 632
E + M+R YGV+P +DHY C++D R G L+EA ++I
Sbjct: 509 EAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELI 550
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 139/559 (24%), Positives = 262/559 (46%), Gaps = 45/559 (8%)
Query: 17 SRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQASVLKNGLFCADA 75
S+ G +++A M + T ++ L +C L + +L L+ +
Sbjct: 63 SKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSG 122
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
+ LL +Y G +V VF++M K+LV+W ++S + K+G +E + LF ++ S
Sbjct: 123 SIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQAS 182
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
+ + ++ ++ LE G+QIH VI+ + + V ++ NMY +C + A
Sbjct: 183 GIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGA 242
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
+ +F ++ ++ V+W ++ +++ ALEL+ RM+++ V ++ F V+ C GL
Sbjct: 243 KLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGL 302
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
++ +G+ IH+ ++K E +V VG+ LVDFY KC ++E A+ F IS N VSW+ALI
Sbjct: 303 EDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALI 362
Query: 316 LGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYE 370
G++ I + L G N F ++ V ++ A L Q H I+ G
Sbjct: 363 SGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLV 422
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
+Y Y +++T Y+K G + Y R +
Sbjct: 423 SYLYGESAMVTMYSKCGRLD------------------------YAR--------RAFES 450
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
++ PD V+W +I+ A++G+ E L F+ M++ + P+ TF+++L+ACS +A
Sbjct: 451 IDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEA 510
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
G + + + + +ID Y + G + ++++ N R + L+ A
Sbjct: 511 KQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELIN----RIALYQLHLVKAETA 566
Query: 551 NGFAQRALEKFREMEFLGF 569
F + +FR +E G+
Sbjct: 567 RAFIPK---EFRLVEAFGY 582
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 201/435 (46%), Gaps = 39/435 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQL 61
+N+VS+ +ISAY++ G +E A+R+F M G P + LL SC + +E G Q+
Sbjct: 151 KNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQI 210
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+ V++ L A+ V TA+ +Y R G L+ VF+ M ++ VTW ++ + +
Sbjct: 211 HSHVIRAQLN-ANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKK 269
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+E + LF + V L E F V+ +D + G QIH ++K G + E+ V
Sbjct: 270 LEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTP 329
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
LV+ Y +C I SA + F + + VSW+ +I ++S ++++ + + V N
Sbjct: 330 LVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLN 389
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ V +CA N +G H IK L ++ SA+V Y+KC L+ A F
Sbjct: 390 SFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFE 449
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQL 360
I + V+W A+I GYA + +Q G RPN TF VL
Sbjct: 450 SIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVL----------- 498
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYN 416
T+ + SGL+++A ++ +++ V P + + Y+
Sbjct: 499 --------------------TACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYS 538
Query: 417 RTGQYNETVKLLSQL 431
R G E ++L++++
Sbjct: 539 RAGLLQEALELINRI 553
>gi|302785287|ref|XP_002974415.1| hypothetical protein SELMODRAFT_462 [Selaginella moellendorffii]
gi|300158013|gb|EFJ24637.1| hypothetical protein SELMODRAFT_462 [Selaginella moellendorffii]
Length = 659
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/595 (26%), Positives = 280/595 (47%), Gaps = 91/595 (15%)
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
+ V ++ + + G++IH +I G + ++ +L+ + + + A+ F +
Sbjct: 38 TLVEILSACTALHSIHLGDRIHQWIIDLGLHRDSVLGTALLTTFARSGSLDRAKAAFTAI 97
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
+D+++WN II A + S +AL+L+ RM +D + PN T V V++ ++S +
Sbjct: 98 ARKDLIAWNAIITATSHSNRSHEALDLFRRMQLDGIHPNAITLVAVLSIFQ--ESSTDAR 155
Query: 263 SIHAKVIKNAL-ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
++H+ +++A+ E V VG+++V+ YA+C +L+ A L F+ I +KN+VSWN +I ++
Sbjct: 156 AVHSLAMESAMDESSVAVGNSIVNMYARCRDLDRARLAFARIQSKNVVSWNVMISAHSQL 215
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYE-------NYEY 374
+ + ++ G + + TF ++ A L+ L+ R E Y+
Sbjct: 216 DRLHPLAMFHAMMLEGIKADATTFVNLASGLAAPSPLRDGELLHRCARELGGGRTLIYDA 275
Query: 375 VLG-SLMTSYAK------------------------------------------------ 385
VL SL+T +AK
Sbjct: 276 VLATSLVTMFAKCGSVAHARDIFHENFHCHERNPVVWNAIIAALVQNHDFSDALLLFRTM 335
Query: 386 --SGLISDALAFVTALNIPRAV----------------------VPANIIAGIYNRTGQY 421
G+ SDA+ FV+ ++ A+ + A + Y+++ +
Sbjct: 336 QLQGVPSDAITFVSTIDACTALEDFSTGRALHGIISESSLETDTIVATALVNFYSKSRRL 395
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
+ ++ PD+V+WN++IAA N D LE+F + + PD TF++ L+AC
Sbjct: 396 DAATAAFQRIPEPDLVAWNVLIAAHVDNADSSTALEIFFHR--MELKPDRITFITTLAAC 453
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVIT 540
L LG LH I++ + SD V + L+DMY KCGS+ + K+F+ M R N T
Sbjct: 454 VTASALPLGRRLHEQIRQRGL-HSDVIVASALVDMYSKCGSLEEAYKVFSTMAGRRNSAT 512
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W ALI+ +GF+ RA REM+ G +PD + + +L AC H GL+ +G + F +
Sbjct: 513 WNALIAGHAQHGFSGRAPSLVREMQLEGVEPDSLTYVGLLLACSHAGLLEDGCKFFAALV 572
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII----TTMPFPPNALIWRTFLEGC 651
+ + +HY CVVDLL R G L EAE+ + MP +A +W + L C
Sbjct: 573 EDKRLAVKEEHYGCVVDLLGRAGKLAEAEEFLLGLRRAMPVAASAAMWTSLLSAC 627
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 144/581 (24%), Positives = 272/581 (46%), Gaps = 52/581 (8%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQA 63
++++++N+II+A S +AL +F M G P T +LS + + + +
Sbjct: 100 KDLIAWNAIITATSHSNRSHEALDLFRRMQLDGIHPNAITLVAVLSIFQESSTDARAVHS 159
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
+++ + + VG +++ +Y R LD F + K++V+WN ++S + +
Sbjct: 160 LAMESAMDESSVAVGNSIVNMYARCRDLDRARLAFARIQSKNVVSWNVMISAHSQLDRLH 219
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG----FDYELLVA 179
+ +F ++ + ++FV + GL+ L GE +H + G Y+ ++A
Sbjct: 220 P-LAMFHAMMLEGIKADATTFVNLASGLAAPSPLRDGELLHRCARELGGGRTLIYDAVLA 278
Query: 180 NSLVNMYFQCAGIWSAEKMFKD---VEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
SLV M+ +C + A +F + R+ V WN II AL ++ +F AL L+ M +
Sbjct: 279 TSLVTMFAKCGSVAHARDIFHENFHCHERNPVVWNAIIAALVQNHDFSDALLLFRTMQLQ 338
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V + TFV I++C L++ G+++H + +++LE D V +ALV+FY+K L+ A
Sbjct: 339 GVPSDAITFVSTIDACTALEDFSTGRALHGIISESSLETDTIVATALVNFYSKSRRLDAA 398
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F I ++V+WN LI + + S T++ + ++L +P+ TF L + +
Sbjct: 399 TAAFQRIPEPDLVAWNVLIAAHVDNADSSTALEIFFHRMEL--KPDRITFITTLAACVTA 456
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
L L G +E + + GL SD V+ A+ + +Y
Sbjct: 457 SALPL-------GRRLHEQI--------RQRGLHSD-------------VIVASALVDMY 488
Query: 416 NRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
++ G E K+ S + R + +WN +IA A +G L + M+ + PD+ T+
Sbjct: 489 SKCGSLEEAYKVFSTMAGRRNSATWNALIAGHAQHGFSGRAPSLVREMQLEGVEPDSLTY 548
Query: 475 VSLLSACSKLCNLALGSSLHGLI--KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
V LL ACS L G + K + + + C ++D+ G+ G + + +
Sbjct: 549 VGLLLACSHAGLLEDGCKFFAALVEDKRLAVKEEHYGC--VVDLLGRAGKLAEAEEFLLG 606
Query: 533 M-----TDRNVITWTALISALGLNG---FAQRALEKFREME 565
+ + WT+L+SA G++G A+RA + ++E
Sbjct: 607 LRRAMPVAASAAMWTSLLSACGVHGDMELARRAARRVLDLE 647
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 120/257 (46%), Gaps = 6/257 (2%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQL 61
+RN V +N+II+A + DAL +F M +G TF + +C +L +
Sbjct: 306 ERNPVVWNAIIAALVQNHDFSDALLLFRTMQLQGVPSDAITFVSTIDACTALEDFSTGRA 365
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
++ D V TAL+ Y + LD + F+ +P LV WN +++ +
Sbjct: 366 LHGIISESSLETDTIVATALVNFYSKSRRLDAATAAFQRIPEPDLVAWNVLIAAHVDNAD 425
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ +F R E+ +F+ + L G ++H + + G +++VA++
Sbjct: 426 SSTALEIFFH--RMELKPDRITFITTLAACVTASALPLGRRLHEQIRQRGLHSDVIVASA 483
Query: 182 LVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
LV+MY +C + A K+F + R+ +WN +I A+ G+A L M ++ V P
Sbjct: 484 LVDMYSKCGSLEEAYKVFSTMAGRRNSATWNALIAGHAQHGFSGRAPSLVREMQLEGVEP 543
Query: 241 NQTTFVYVINSC--AGL 255
+ T+V ++ +C AGL
Sbjct: 544 DSLTYVGLLLACSHAGL 560
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/502 (29%), Positives = 257/502 (51%), Gaps = 11/502 (2%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYF--QCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+QIH +++ + A+ L+ Y C+ + A+ +F + ++ WNT+I A
Sbjct: 89 KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYA 148
Query: 219 ESENFGKALELYLRMSVDIV-FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
S + ++ ++L M FPN+ TF ++ + + L+ LG +H VIK +L D+
Sbjct: 149 SSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDL 208
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL- 336
F+ ++L++FY + AH F+ + K++VSWNA+I +A P LL + +++
Sbjct: 209 FILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMK 268
Query: 337 GYRPNEFTFSHVLRS---SLAFQLLQLHCLIIRM-GYENYEYVLGSLMTSYAKSGLISDA 392
+PN T VL + + + + C I G+ + + +++ Y K G I+DA
Sbjct: 269 DVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDA 328
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
++ V ++ G + + G Y+E + + +WN +I+A NG
Sbjct: 329 KDLFNKMSEKDIVSWTTMLDG-HAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKP 387
Query: 453 KEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+ L LF M+ ++ PD T + L A ++L + G +H IKK +I + + +
Sbjct: 388 RVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDI-NLNCHLAT 446
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
L+DMY KCG++ ++++F+ + ++V W+A+I AL + G + AL+ F M KP
Sbjct: 447 SLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKP 506
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ V +L AC H GLV EG +LFE+M YG+ P++ HY CVVD+ R G L++A
Sbjct: 507 NAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASF 566
Query: 632 ITTMPFPPNALIWRTFLEGCQR 653
I MP PP A +W L C R
Sbjct: 567 IEKMPIPPTAAVWGALLGACSR 588
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 131/523 (25%), Positives = 241/523 (46%), Gaps = 59/523 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLLSCDSLNPVE-- 57
+P N+ +N++I Y+ + +FL+M++ E P +FTF L S V
Sbjct: 132 IPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHL 191
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G+ L V+K L +D F+ +L+ YG G D VF +MP K +V+WN++++ F
Sbjct: 192 GSVLHGMVIKASL-SSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFA 250
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + + LF E+ +V + V V+ + + DLEFG I + NGF L+
Sbjct: 251 LGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLI 310
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF-------------- 223
+ N++++MY +C I A+ +F + +D+VSW T++ A+ N+
Sbjct: 311 LNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKW 370
Query: 224 --------------GK---ALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIH 265
GK AL L+ M + P++ T + + + A L G IH
Sbjct: 371 TAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIH 430
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSP 324
+ K+ + + + ++L+D YAKC NL A F + K++ W+A+I A
Sbjct: 431 VYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGK 490
Query: 325 TSIFLLIELLQLGYRPNEFTFSHVL-----------RSSLAFQLLQLHCLIIRMGYENYE 373
++ L +L+ +PN TF+++L L Q+ L+ ++ ++ +
Sbjct: 491 AALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQH---- 546
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL----LS 429
YV ++ + ++GL+ A +F+ + IP + G +R G E +L L
Sbjct: 547 YV--CVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNV-ELAELAYQNLL 603
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+LE + ++ ++ A GD+++V L K MR + + + +
Sbjct: 604 ELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPW 646
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/531 (24%), Positives = 235/531 (44%), Gaps = 27/531 (5%)
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYG--RHGCLDEVVSVFEDMPRKSLVTWNS 111
N ++ Q+ A +L+ FC D + + LL Y CL +VF +P+ +L WN+
Sbjct: 84 NTMQLKQIHAHMLRTSRFC-DPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNT 142
Query: 112 IVSIFGKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
++ + +F ++ S +F + S + L G +HG+VIK
Sbjct: 143 LIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKA 202
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
+L + NSL+N Y A ++F ++ +DVVSWN +I A A KAL L+
Sbjct: 203 SLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLF 262
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
M + V PN T V V+++CA + G+ I + + N + + +A++D Y KC
Sbjct: 263 QEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKC 322
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP--NEFTFSHV 348
+ A F+++S K+IVSW ++ G+A + + + + + N ++
Sbjct: 323 GCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYE 382
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA---LAFVTALNIPRAV 405
L H + + + E L + + A+ G I ++ +I
Sbjct: 383 QNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNC 442
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
A + +Y + G N+ +++ +ER D+ W+ +I A A G K L+LF M A
Sbjct: 443 HLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEA 502
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSS-------LHGLIKKTEIISSDTFVCNMLIDMYG 518
I P+ TF ++L AC+ + G L+G++ + + +VC ++D++G
Sbjct: 503 YIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQ-----HYVC--VVDIFG 555
Query: 519 KCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
+ G + + +M W AL+ A +G A+ A + E+E
Sbjct: 556 RAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELE 606
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 156/329 (47%), Gaps = 40/329 (12%)
Query: 337 GYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
G + NE +++L + + QL Q+H ++R Y L+T+YA IS
Sbjct: 64 GEKGNEVESTNILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYA----ISSC 119
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+ A N+ +Q+ +P++ WN +I A + D
Sbjct: 120 SCLIYAKNV--------------------------FNQIPQPNLYCWNTLIRGYASSSDP 153
Query: 453 KEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+ +F +M + +P+ +TF L A S+L L LGS LHG++ K +SSD F+ N
Sbjct: 154 TQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKAS-LSSDLFILN 212
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
LI+ YG G+ + ++F M ++V++W A+I+A L G +AL F+EME KP
Sbjct: 213 SLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKP 272
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ + +++VL+AC + G + + + G + + ++D+ V+ G + +A+ +
Sbjct: 273 NVITMVSVLSACAKKIDLEFGRWICSYIENN-GFTEHLILNNAMLDMYVKCGCINDAKDL 331
Query: 632 ITTMPFPPNALIWRTFLEGCQRCRIAKYD 660
M + + W T L+G ++ YD
Sbjct: 332 FNKMS-EKDIVSWTTMLDG--HAKLGNYD 357
>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Cucumis sativus]
Length = 746
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/580 (27%), Positives = 291/580 (50%), Gaps = 45/580 (7%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F+ M + ++VT+NS++S + + ++ M LF + R + L + + G + S +
Sbjct: 23 LFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGALTACSQSGN 82
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L G+ IHGL++ G ++++ NSL++MY +C + A +F + D VSWN++I
Sbjct: 83 LSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAG 142
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQN--SILGKSIHAKVIKNALE 274
++ + + L + +M + + N T + +C+ N + G +H IK L
Sbjct: 143 YVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLH 202
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY------ASKSSPTSIF 328
DV VG+AL+D YAK +L+ A F ++ +KN+V +NA++ G K + ++
Sbjct: 203 LDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALN 262
Query: 329 LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV--LGSLMTSYAKS 386
L E+ G +P+ FT+S +L++ C+I+ E++++ + +LM K+
Sbjct: 263 LFFEMKSCGIKPSMFTYSSLLKA----------CIIV----EDFKFAKQVHALM---CKN 305
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
GL+SD +I+ +Y+ G + + + + IV +I
Sbjct: 306 GLLSDEYI-------------GSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGY 352
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
NG+++ L LF + PD + F +++S+C+ + L G + G K I S
Sbjct: 353 LQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGI-SRF 411
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
T N I MY K G + ++ F +M + ++++W+ +I + +G A AL F M+
Sbjct: 412 TIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKS 471
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
G +P+ A + VL AC H GLV EG+ F+ M + Y ++ + H CVVDLL R G L
Sbjct: 472 CGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLA 531
Query: 627 EAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYDTLNSTK 666
+AE +I + F ++WR L CRI K DT+ + +
Sbjct: 532 DAESLILRLGFEHEPVMWRALLSA---CRIHK-DTVTAQR 567
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/582 (24%), Positives = 269/582 (46%), Gaps = 43/582 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
M N+V++NS+IS Y + ++ + +F G + ++ G L+ S N G
Sbjct: 27 MSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGALTACSQSGNLSAG 86
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +L GL + + +L+ +Y + G +D +F+ + V+WNS+++ + +
Sbjct: 87 KMIHGLILVYGL-GSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQ 145
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD--LEFGEQIHGLVIKNGFDYEL 176
+G E+ + + ++ ++ +A + + S+ + FG +H IK G ++
Sbjct: 146 NGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDV 205
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG-----KALELYL 231
+V +L++MY + + A ++F + ++VV +N ++ L + E KAL L+
Sbjct: 206 VVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFF 265
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
M + P+ T+ ++ +C +++ K +HA + KN L D ++GS L+D Y+
Sbjct: 266 EMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLG 325
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLR 350
++ A LCF+ I N IV A+I GY +++ L ELL +P+EF FS ++
Sbjct: 326 SMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMS 385
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
S +L R G E + G T + I R + N
Sbjct: 386 SCANMGML-------RSG----EQIQGH-----------------ATKVGISRFTIFQNS 417
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+Y ++G Q+E PDIVSW+ +I + A +G E L F+ M++ I P+
Sbjct: 418 QIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPN 477
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
++ F+ +L ACS + G ++K + C ++D+ G+ G + + +
Sbjct: 478 HFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLI 537
Query: 531 NEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEFLG 568
+ + + W AL+SA ++ AQR +K E+E L
Sbjct: 538 LRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLA 579
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 138/305 (45%), Gaps = 41/305 (13%)
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
KC + A F ++S NIV++N+LI GY S+ + +L + +
Sbjct: 13 KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKAR------------- 59
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL---AFVTALNIPRAV 405
R+G + +Y +T+ ++SG +S + + V
Sbjct: 60 -----------------RLGLKLDKYNCAGALTACSQSGNLSAGKMIHGLILVYGLGSQV 102
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
V N + +Y++ GQ + L ++ D VSWN +IA NG Y+E+L + + M
Sbjct: 103 VLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQN 162
Query: 466 RIYPDNYTFVSLLSACSKLCN--LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ + YT S L ACS N G+ LH K + D V L+DMY K GS+
Sbjct: 163 GLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLG-LHLDVVVGTALLDMYAKTGSL 221
Query: 524 GSSVKIFNEMTDRNVITWTALISALGL-----NGFAQRALEKFREMEFLGFKPDRVALIA 578
+++IF++M D+NV+ + A+++ L + A +AL F EM+ G KP +
Sbjct: 222 DDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSS 281
Query: 579 VLTAC 583
+L AC
Sbjct: 282 LLKAC 286
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 11/239 (4%)
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G KL ++ + +IV++N +I+ + +V+ LF R + D Y
Sbjct: 13 KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
L+ACS+ NL+ G +HGLI + S + N LIDMY KCG + + +F+
Sbjct: 73 ALTACSQSGNLSAGKMIHGLI-LVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKL 131
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+ ++W +LI+ NG + L ++M G + L + L AC G ++F
Sbjct: 132 DGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSN---FNGCKMF 188
Query: 597 ERMNRSYGVEPEMDHYHCVV-----DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
M + ++ + H VV D+ + G L +A +I M N +++ + G
Sbjct: 189 GTMLHDHAIKLGL-HLDVVVGTALLDMYAKTGSLDDAIQIFDQM-VDKNVVMYNAMMAG 245
>gi|145340387|ref|NP_193587.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236144|sp|Q0WNP3.1|PP319_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18520
gi|110738662|dbj|BAF01256.1| hypothetical protein [Arabidopsis thaliana]
gi|332658657|gb|AEE84057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 617
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 158/540 (29%), Positives = 264/540 (48%), Gaps = 43/540 (7%)
Query: 53 LNPVEGAQLQASVLKNGLFCADA---FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
L G +L + L C D + G L+ R G L VF+ MP K+ VTW
Sbjct: 92 LQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTW 151
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALT-ESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
+++ + K+G ++ LF + V+ + T E FV +++ S + E G Q+HG ++
Sbjct: 152 TAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMV 211
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
K G L+V +SLV Y QC + SA + F +E +DV+SW +I A + + KA+
Sbjct: 212 KVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIG 270
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
+++ M PN+ T ++ +C+ + G+ +H+ V+K ++ DVFVG++L+D YA
Sbjct: 271 MFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYA 330
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR-PNEFTFSH 347
KC + F +SN+N V+W ++I +A + L +++ + N T
Sbjct: 331 KCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVS 390
Query: 348 VLRS--SLAFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
+LR+ S+ LL +LH II+ E Y+ +L+ Y K G DA
Sbjct: 391 ILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAF---------- 440
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+L QL D+VSW +I+ C+ G E L+ K M
Sbjct: 441 ----------------------NVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMI 478
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ P+ +T+ S L AC+ +L +G S+H + KK + S+ FV + LI MY KCG +
Sbjct: 479 QEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL-SNVFVGSALIHMYAKCGFV 537
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ ++F+ M ++N+++W A+I NGF + AL+ ME GF+ D +L+ C
Sbjct: 538 SEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 240/493 (48%), Gaps = 44/493 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPT-QFTFGGLLS-CDSLNPVE- 57
MP++N V++ ++I Y + G ++A +F + G T + F LL+ C E
Sbjct: 143 MPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFEL 202
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ +++K G+ + V ++L+ Y + G L + F+ M K +++W +++S
Sbjct: 203 GRQVHGNMVKVGV--GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACS 260
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G + +F ++ E + ++ S E+ L FG Q+H LV+K ++
Sbjct: 261 RKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVF 320
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-ALELYLRMSVD 236
V SL++MY +C I K+F + R+ V+W +II A A E FG+ A+ L+ M
Sbjct: 321 VGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAR-EGFGEEAISLFRIMKRR 379
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ N T V ++ +C + +LGK +HA++IKN++E +V++GS LV Y KC A
Sbjct: 380 HLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDA 439
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
++ ++++VSW A+I G +S + ++ L E++Q G PN FT+S L++
Sbjct: 440 FNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANS 499
Query: 356 QLLQLHCLIIRMGYENYE----YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ L + I + +N+ +V +L+ YAK G +S+A
Sbjct: 500 ESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAF------------------ 541
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++ + ++VSW +I A NG +E L+L M A D+
Sbjct: 542 --------------RVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDD 587
Query: 472 YTFVSLLSACSKL 484
Y F ++LS C +
Sbjct: 588 YIFATILSTCGDI 600
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 184/396 (46%), Gaps = 42/396 (10%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
K IHA +K + ++ G+ L+ + +L A F + KN V+W A+I GY
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 322 SSPTSIFLLIE-LLQLGYR-PNEFTFSHVLR---SSLAFQL-LQLHCLIIRMGYENYEYV 375
F L E ++ G R NE F +L F+L Q+H ++++G N V
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNL-IV 220
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
SL+ YA+ G ++ AL + +E D
Sbjct: 221 ESSLVYFYAQCGELTSAL--------------------------------RAFDMMEEKD 248
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
++SW VI+AC+ G + + +F M P+ +T S+L ACS+ L G +H
Sbjct: 249 VISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHS 308
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
L+ K +I +D FV L+DMY KCG I K+F+ M++RN +TWT++I+A GF +
Sbjct: 309 LVVK-RMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGE 367
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
A+ FR M+ + + ++++L AC G + G EL ++ ++ +E + +
Sbjct: 368 EAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVYIGSTL 426
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
V L + G ++A ++ +P + + W + GC
Sbjct: 427 VWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISGC 461
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 133/258 (51%), Gaps = 3/258 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M +RN V++ SII+A++R G+ E+A+ +F M R T +L +C S+ + G
Sbjct: 345 MSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLG 404
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+L A ++KN + + ++G+ L+ LY + G + +V + +P + +V+W +++S
Sbjct: 405 KELHAQIIKNSIE-KNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSS 463
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + E+++ V ++ + +N + L G IH + KN + V
Sbjct: 464 LGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFV 523
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++L++MY +C + A ++F + +++VSW +I A + +AL+L RM +
Sbjct: 524 GSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGF 583
Query: 239 FPNQTTFVYVINSCAGLQ 256
+ F ++++C ++
Sbjct: 584 EVDDYIFATILSTCGDIE 601
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 168/605 (27%), Positives = 286/605 (47%), Gaps = 52/605 (8%)
Query: 79 TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL-VRSEV 137
A+L RHG +DE ++F+ MP ++ V+WN++++ HG V D LF + VR E
Sbjct: 53 NAMLSALARHGRIDEARALFDGMPGRNTVSWNAMIAALSDHGRVADARSLFDRMPVRDEF 112
Query: 138 ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEK 197
S+ ++ + DLE + + + D N++++ Y + A K
Sbjct: 113 -----SWTVMVSCYARGGDLELARDV---LDRMPGDKCTACYNAMISGYAKNGRFDDAMK 164
Query: 198 MFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD--------------------- 236
+ +++ D+VSWN+ + L +S +A++ + M D
Sbjct: 165 LLREMPAPDLVSWNSALAGLTQSGEMVRAVQFFDEMVKDMTSWNLMLAGFVRTGDLNAAS 224
Query: 237 -----IVFPNQTTFVYVINS-CAGLQNSILGKSIHAKVIKNAL-ECDVFVGSALVDFYAK 289
I PN ++V ++N C G+ A+ + + + E +V + ++D Y
Sbjct: 225 SFFAKIESPNVISWVTLLNGYCRA------GRIADARDLFDRMPERNVVAWNVMLDGYVH 278
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSH-V 348
+E A F E+ KN +SW +I G A L++ + + H
Sbjct: 279 LSPIEEACKLFDEMPIKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGY 338
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYV-LGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
L+ ++A + I G E ++ V ++++ Y + G++ +A+ + V
Sbjct: 339 LQRNMADDARR-----IFDGMEVHDTVCWNTMISGYVQCGILEEAMLLFQRMPNKDMVSW 393
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+IAG Y + GQ ++ + + ++ R + VSWN VI+ N + + L F MR
Sbjct: 394 NTMIAG-YAQDGQMHKAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTN 452
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
D T+ S L AC+ L L +G LH L+ ++ I+ D+F N LI Y KCG I +
Sbjct: 453 RADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHIN-DSFAGNALISTYAKCGRILEAK 511
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+IF+EM +++++W ALI NG A+ FREME G +PD V + +L+AC H G
Sbjct: 512 QIFDEMVYKDIVSWNALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAG 571
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
L+ EG+ F M + Y ++P +HY C+VDLL R G L EA +++ M PNA +W
Sbjct: 572 LIDEGLFFFYSMTKEYLLKPVAEHYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGAL 631
Query: 648 LEGCQ 652
L C
Sbjct: 632 LGACH 636
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 159/632 (25%), Positives = 280/632 (44%), Gaps = 118/632 (18%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP RN VS+N++I+A S G V DA +F M R +F++ ++SC + +
Sbjct: 75 MPGRNTVSWNAMIAALSDHGRVADARSLFDRMPVR----DEFSWTVMVSCYARGG--DLE 128
Query: 61 LQASVLKN--GLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L VL G C + A++ Y ++G D+ + + +MP LV+WNS ++ +
Sbjct: 129 LARDVLDRMPGDKCTACY--NAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQ 186
Query: 119 HGFVEDCMFLFCELVRSEVA--LTESSFV--GVIHGLSN-EQDLEFGEQIHGLVIKNGF- 172
G + + F E+V+ + L + FV G ++ S+ +E I + + NG+
Sbjct: 187 SGEMVRAVQFFDEMVKDMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYC 246
Query: 173 ----------------DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
+ ++ N +++ Y + I A K+F ++ I++ +SW TII
Sbjct: 247 RAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMPIKNSISWTTIISG 306
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC- 275
LA + +A +L +MS + V +T ++ LQ ++ + A+ I + +E
Sbjct: 307 LARAGKLQEAKDLLDKMSFNCVAA-KTALMH-----GYLQRNM---ADDARRIFDGMEVH 357
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA---------------- 319
D + ++ Y +C LE A L F + NK++VSWN +I GYA
Sbjct: 358 DTVCWNTMISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMN 417
Query: 320 -----SKSSPTSIFLLIE----------LLQLGY-RPNEFTFSHVLRSSLAFQLL----Q 359
S +S S F+ + L++ G R + T++ LR+ +L Q
Sbjct: 418 RRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAVLHVGRQ 477
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
LH L++R G+ N + +L+++YAK G I
Sbjct: 478 LHNLLVRSGHINDSFAGNALISTYAKCGRIL----------------------------- 508
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
E ++ ++ DIVSWN +I A NG E + +F+ M A + PD TFV +LS
Sbjct: 509 ---EAKQIFDEMVYKDIVSWNALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILS 565
Query: 480 ACSKLCNLALGSSLHGLIKKTEIIS--SDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DR 536
ACS + G + K ++ ++ + C ++D+ G+ G + + ++ M
Sbjct: 566 ACSHAGLIDEGLFFFYSMTKEYLLKPVAEHYAC--MVDLLGRAGKLNEAFELVQGMQIQP 623
Query: 537 NVITWTALISALGLNG---FAQRALEKFREME 565
N W AL+ A ++ AQ A E+ E+E
Sbjct: 624 NAGVWGALLGACHMHKNHELAQLAAERLSELE 655
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 128/303 (42%), Gaps = 45/303 (14%)
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+T A+SG ++ A A+ + R V N + R G+ +E L + + VSW
Sbjct: 25 LTRLARSGQLAAARRLFDAMPL-RNTVTYNAMLSALARHGRIDEARALFDGMPGRNTVSW 83
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
N +IAA + +G + LF M D +++ ++S ++ +L L + +
Sbjct: 84 NAMIAALSDHGRVADARSLFDRMPVR----DEFSWTVMVSCYARGGDLELARDVLDRMPG 139
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+ T N +I Y K G ++K+ EM ++++W + ++ L +G RA++
Sbjct: 140 DKC----TACYNAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQ 195
Query: 560 KFREM---------EFLGF-----------------KPDRVALIAVLTACRHGGLVREGM 593
F EM GF P+ ++ + +L G + +
Sbjct: 196 FFDEMVKDMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADAR 255
Query: 594 ELFERMNRSYGVEPEMD--HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+LF+RM PE + ++ ++D V ++EA K+ MP N++ W T + G
Sbjct: 256 DLFDRM-------PERNVVAWNVMLDGYVHLSPIEEACKLFDEMPI-KNSISWTTIISGL 307
Query: 652 QRC 654
R
Sbjct: 308 ARA 310
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 17/133 (12%)
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
F N + + G + ++ ++F+ M RN +T+ A++SAL +G A F M
Sbjct: 19 FRSNKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGM--- 75
Query: 568 GFKPDR--VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH--CVVDLLVRYG 623
P R V+ A++ A G V + LF+RM P D + +V R G
Sbjct: 76 ---PGRNTVSWNAMIAALSDHGRVADARSLFDRM-------PVRDEFSWTVMVSCYARGG 125
Query: 624 HLKEAEKIITTMP 636
L+ A ++ MP
Sbjct: 126 DLELARDVLDRMP 138
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/558 (28%), Positives = 263/558 (47%), Gaps = 33/558 (5%)
Query: 105 SLVTWN-SIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI 163
S+ WN I ++ VE + LF E+ R +F V + D+ E +
Sbjct: 16 SVNAWNLQIREAVNRNDPVES-LLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMV 74
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H +IK+ F ++ V + V+M+ +C + A K+F+ + RD +WN ++ +S +
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
KA L+ M ++ + P+ T + +I S + ++ L +++HA I+ ++ V V +
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 284 VDFYAKCDNLEGAHLCFSEIS--NKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRP 340
+ Y KC +L+ A L F I ++ +VSWN++ Y+ F L +L+ ++P
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 341 NEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
+ TF ++ S + L G L+ S+A L
Sbjct: 255 DLSTFINLAASCQNPETL----------------TQGRLIHSHA------------IHLG 286
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
+ + N +Y+++ L + VSW ++I+ A GD E L LF
Sbjct: 287 TDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFH 346
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M + PD T +SL+S C K +L G + + +CN LIDMY KC
Sbjct: 347 AMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKC 406
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
GSI + IF+ ++ V+TWT +I+ LNG AL+ F +M L +KP+ + +AVL
Sbjct: 407 GSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVL 466
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
AC H G + +G E F M + Y + P +DHY C+VDLL R G L+EA ++I M P+
Sbjct: 467 QACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPD 526
Query: 641 ALIWRTFLEGCQRCRIAK 658
A IW L C+ R K
Sbjct: 527 AGIWGALLNACKIHRNVK 544
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 152/567 (26%), Positives = 272/567 (47%), Gaps = 46/567 (8%)
Query: 12 IISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQASVLKNGL 70
I A +R VE +L +F M GFEP FTF + +C L V ++ + L
Sbjct: 24 IREAVNRNDPVE-SLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSP 82
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFC 130
F +D FVGTA + ++ + +D VFE MP + TWN+++S F + G + LF
Sbjct: 83 FWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFR 142
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
E+ +E+ + + +I S E+ L+ E +H + I+ G D ++ VAN+ ++ Y +C
Sbjct: 143 EMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCG 202
Query: 191 GIWSAEKMFKDVEI--RDVVSWNTIIGALAESENFGKALE---LYLRMSVDIVFPNQTTF 245
+ SA+ +F+ ++ R VVSWN++ A + FG+A + LY M + P+ +TF
Sbjct: 203 DLDSAKLVFEAIDRGDRTVVSWNSMFKAYSV---FGEAFDAFGLYCLMLREEFKPDLSTF 259
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
+ + SC + G+ IH+ I + D+ + + Y+K ++ A L F +++
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 319
Query: 306 KNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
+ VSW +I GYA K ++ L +++ G +P+ L+ L LI
Sbjct: 320 RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPD---------------LVTLLSLI 364
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
G GSL T G DA A + ++ N + +Y++ G +E
Sbjct: 365 SGCGK------FGSLET-----GKWIDARADIYGCKRDNVMI-CNALIDMYSKCGSIHEA 412
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+ +V+W +IA A NG + E L+LF M P++ TF+++L AC+
Sbjct: 413 RDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHS 472
Query: 485 CNLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITW 541
+L G ++K+ IS D + C ++D+ G+ G + ++++ M+ + + W
Sbjct: 473 GSLEKGWEYFHIMKQVYNISPGLDHYSC--MVDLLGRKGKLEEALELIRNMSAKPDAGIW 530
Query: 542 TALISALGLN---GFAQRALEKFREME 565
AL++A ++ A++A E +E
Sbjct: 531 GALLNACKIHRNVKIAEQAAESLFNLE 557
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 200/460 (43%), Gaps = 39/460 (8%)
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
++++ + V +WN I + ++L L+ M PN TF +V +CA L
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLA 66
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ + +HA +IK+ DVFVG+A VD + KC++++ A F + ++ +WNA++
Sbjct: 67 DVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 126
Query: 317 GYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSS---LAFQLLQ-LHCLIIRMGYEN 371
G+ F L ++L P+ T +++S+ + +LL+ +H + IR+G +
Sbjct: 127 GFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV 186
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
V + +++Y K G + A A++ +RT
Sbjct: 187 QVTVANTWISTYGKCGDLDSAKLVFEAIDRG-------------DRT------------- 220
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
+VSWN + A + G+ + L+ M PD TF++L ++C L G
Sbjct: 221 ----VVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR 276
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
+H D N I MY K S+ +F+ MT R ++WT +IS
Sbjct: 277 LIHSHAIHLG-TDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEK 335
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G AL F M G KPD V L+++++ C G + G + R + YG + +
Sbjct: 336 GDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARAD-IYGCKRDNVM 394
Query: 612 Y-HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ ++D+ + G + EA I P + W T + G
Sbjct: 395 ICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAG 433
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 127/257 (49%), Gaps = 10/257 (3%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGL-LSCDSLNP---VEG 58
DR VVS+NS+ AYS G DA ++ M+ F+P TF L SC NP +G
Sbjct: 218 DRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQ--NPETLTQG 275
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + + G D + +Y + +F+ M ++ V+W ++S + +
Sbjct: 276 RLIHSHAIHLGT-DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAE 334
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE-LL 177
G +++ + LF +++S + + +I G LE G+ I G + ++
Sbjct: 335 KGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVM 394
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ N+L++MY +C I A +F + + VV+W T+I A + F +AL+L+ +M +D+
Sbjct: 395 ICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKM-IDL 453
Query: 238 VF-PNQTTFVYVINSCA 253
+ PN TF+ V+ +CA
Sbjct: 454 DYKPNHITFLAVLQACA 470
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ 60
P++ VV++ ++I+ Y+ G +AL++F MI+ ++P TF +L +C +E
Sbjct: 420 PEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGW 479
Query: 61 LQASVLKNGLFCADAFVG-TALLGLYGRHGCLDEVVSVFEDMPRK 104
++K + + ++ L GR G L+E + + +M K
Sbjct: 480 EYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAK 524
>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
Length = 1251
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 163/562 (29%), Positives = 269/562 (47%), Gaps = 41/562 (7%)
Query: 105 SLVTWN-SIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI 163
S+ WN + ++ VE + LF E+ R +F V + + + E +
Sbjct: 612 SVNAWNFQVREAVNRNDPVE-SLLLFREMKRGGFEPNNFTFPFVAKACARLAYIGYCEMV 670
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H +IK+ F ++ V + V+M+ +C + A K+F+ + +RD +WN ++ +S +
Sbjct: 671 HTHLIKSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGHT 730
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
K L+ M +D + P+ T + +I S + ++ L K +HA I+ ++ V +
Sbjct: 731 DKVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNTW 790
Query: 284 VDFYAKCDNLEGAHLCFSEIS--NKNIVSWNALILGYASKSSPTSIFLLIEL-LQLGYRP 340
+ Y KC +L+ A L F I ++ +VSWN++ +A F L L+ ++P
Sbjct: 791 ISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKP 850
Query: 341 NEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
+ TF ++ S Q L +H I +G + + + ++ Y+KSG D+ +
Sbjct: 851 DLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSG---DSCSAR 907
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
+I + +RT VSW ++I+ A GD E L
Sbjct: 908 LLFDI------------MPSRT-----------------CVSWTVMISGYAEKGDMDEAL 938
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
LF M + PD T +SL+S C K +L +G + G + VCN LIDM
Sbjct: 939 ALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIGKWIDGRADMYGCKKDNVMVCNALIDM 998
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y KCGSI + IF+ +++ ++TWT +I+ LNG A+E F +M L +KP+ +
Sbjct: 999 YSKCGSIDEARDIFDNTSEKTMVTWTTMIAGYALNGIFLEAMELFSKMIDLDYKPNHITF 1058
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+AVL AC H G + +G E F M + Y + P +DHY C+VDLL R G L EA ++I M
Sbjct: 1059 LAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLDEALELIHNMS 1118
Query: 637 FPPNALIWRTFLEGCQRCRIAK 658
P+A IW L C+ R K
Sbjct: 1119 AKPDAGIWGALLSACKIHRNVK 1140
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 149/545 (27%), Positives = 254/545 (46%), Gaps = 41/545 (7%)
Query: 12 IISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQASVLKNGL 70
+ A +R VE +L +F M GFEP FTF + +C L + ++ + L
Sbjct: 620 VREAVNRNDPVE-SLLLFREMKRGGFEPNNFTFPFVAKACARLAYIGYCEMVHTHLIKSP 678
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFC 130
F +D FVGTA + ++ + LD VFE MP + TWN+++S F + G + LF
Sbjct: 679 FWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGHTDKVFSLFR 738
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
E+ E+ + + +I S E+ L+ + +H I+ G D + V+N+ ++ Y +C
Sbjct: 739 EMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNTWISAYGKCG 798
Query: 191 GIWSAEKMFK--DVEIRDVVSWNTIIGALAESENFGKALEL---YLRMSVDIVFPNQTTF 245
+ SA+ +F+ D R VVSWN++ A A FG+A + Y M D P+ +TF
Sbjct: 799 DLDSAKLVFEAIDRGDRTVVSWNSVFKAFA---VFGEAFDAFGHYRLMLRDEFKPDLSTF 855
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
+ + SC Q G+ IH+ I + D+ + + Y+K + A L F + +
Sbjct: 856 INLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLLFDIMPS 915
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLII 365
+ VSW +I GYA K + E L L F + ++ + L+ L LI
Sbjct: 916 RTCVSWTVMISGYAEKGD------MDEALAL--------FHAMAKTGVNPDLVTLLSLIS 961
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
G GSL G D A + +V N + +Y++ G +E
Sbjct: 962 GCG------KFGSLEI-----GKWIDGRADMYGCKKDNVMV-CNALIDMYSKCGSIDEAR 1009
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
+ +V+W +IA A NG + E +ELF M P++ TF+++L AC+
Sbjct: 1010 DIFDNTSEKTMVTWTTMIAGYALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSG 1069
Query: 486 NLALGSSLHGLIKKTEIISS--DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWT 542
+L G ++K+ IS D + C ++D+ G+ G + ++++ + M+ + + W
Sbjct: 1070 SLEKGWEYFHIMKQVYNISPGLDHYSC--MVDLLGRKGKLDEALELIHNMSAKPDAGIWG 1127
Query: 543 ALISA 547
AL+SA
Sbjct: 1128 ALLSA 1132
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 129/257 (50%), Gaps = 10/257 (3%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGL-LSCDSLNP---VEG 58
DR VVS+NS+ A++ G DA + M+ F+P TF L SC NP +G
Sbjct: 814 DRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDLSTFINLAASCQ--NPQTLTQG 871
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + + G D + +Y + G +F+ MP ++ V+W ++S + +
Sbjct: 872 RLIHSHAIHLGT-DQDIEAINTFISMYSKSGDSCSARLLFDIMPSRTCVSWTVMISGYAE 930
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE-LL 177
G +++ + LF + ++ V + + +I G LE G+ I G G + ++
Sbjct: 931 KGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIGKWIDGRADMYGCKKDNVM 990
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V N+L++MY +C I A +F + + +V+W T+I A + F +A+EL+ +M +D+
Sbjct: 991 VCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAGYALNGIFLEAMELFSKM-IDL 1049
Query: 238 VF-PNQTTFVYVINSCA 253
+ PN TF+ V+ +CA
Sbjct: 1050 DYKPNHITFLAVLQACA 1066
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 2/162 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R VS+ +IS Y+ G +++AL +F M G P T L+S C +E G
Sbjct: 913 MPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIG 972
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ G + V AL+ +Y + G +DE +F++ K++VTW ++++ +
Sbjct: 973 KWIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAGYAL 1032
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
+G + M LF +++ + +F+ V+ ++ LE G
Sbjct: 1033 NGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 1074
>gi|302811910|ref|XP_002987643.1| hypothetical protein SELMODRAFT_126599 [Selaginella moellendorffii]
gi|300144535|gb|EFJ11218.1| hypothetical protein SELMODRAFT_126599 [Selaginella moellendorffii]
Length = 540
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 155/477 (32%), Positives = 231/477 (48%), Gaps = 24/477 (5%)
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
MY +C A+ +F + D SW +I A S +AL LY M D+ PN
Sbjct: 1 MYGKCRRPREAQLVFDHIRAPDADSWMNLIAAFVRSGAEREALHLYAAM--DVFPPNPFV 58
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
+ VI +C+ L++ G+ IH ++I++ D +ALVD YAKC +LE A FS I
Sbjct: 59 YPSVIKACSVLRDLAQGREIHRRIIQHQHCLDAVTSTALVDMYAKCGDLETAATIFSSIQ 118
Query: 305 NKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQ---- 359
K +VSW+A+I GY + + + L G P++F S +L + Q L
Sbjct: 119 EKTLVSWSAMISGYVRNERYSQAIGIFHRMNLEGLEPDDFILSSLLLACSKIQALDQGRT 178
Query: 360 LHCLIIRMGYENYE--YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+H I+ V +LM YA G + DA + ++ ++ A +I Y R
Sbjct: 179 IHARILSSSSPAATNLVVETALMVMYANCGSLIDAKSMFDGMSSKDSIAWATMIEA-YFR 237
Query: 418 TGQYNETVKLL---------SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARI 467
G + L Q + WN VI A A G +E L+LF+ M + + +
Sbjct: 238 YGDAGAGIAALRVMILEGVKPQANFRTVECWNSVILALASAGREREALDLFQEMEKTSAL 297
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD T +L AC+ + L G ++H +K + D V N L+ MY KCGS+ +
Sbjct: 298 VPDAVTLNRILGACAAIGALDEGRAIHSRLK----LHPDGPVGNSLVHMYAKCGSLMEAR 353
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
++F M +RNV+ WTA++ AL +GF LEKFR M G PD V +L C H G
Sbjct: 354 QVFEGMVERNVVGWTAMVVALAHHGFHGECLEKFRLMRHYGIDPDGVTFTNLLNCCSHAG 413
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIW 644
LV G F M + +G+EP + Y +VDL+ R G L+ AE+++ MPF P+ W
Sbjct: 414 LVSRGWMFFAAMTQDHGMEPTAEQYEVMVDLVARCGRLEVAEELMEAMPFQPDEEGW 470
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 223/490 (45%), Gaps = 20/490 (4%)
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
+YG+ E VF+ + +W ++++ F + G + + L+ + +
Sbjct: 1 MYGKCRRPREAQLVFDHIRAPDADSWMNLIAAFVRSGAEREALHLYAAMD----VFPPNP 56
Query: 144 FV--GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKD 201
FV VI S +DL G +IH +I++ + + + +LV+MY +C + +A +F
Sbjct: 57 FVYPSVIKACSVLRDLAQGREIHRRIIQHQHCLDAVTSTALVDMYAKCGDLETAATIFSS 116
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILG 261
++ + +VSW+ +I +E + +A+ ++ RM+++ + P+ ++ +C+ +Q G
Sbjct: 117 IQEKTLVSWSAMISGYVRNERYSQAIGIFHRMNLEGLEPDDFILSSLLLACSKIQALDQG 176
Query: 262 KSIHAKVIKNA--LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
++IHA+++ ++ ++ V +AL+ YA C +L A F +S+K+ ++W +I Y
Sbjct: 177 RTIHARILSSSSPAATNLVVETALMVMYANCGSLIDAKSMFDGMSSKDSIAWATMIEAYF 236
Query: 320 SKSSPTSIFLLIELL-------QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY 372
+ + ++ Q +R E S +L + A + + L M +
Sbjct: 237 RYGDAGAGIAALRVMILEGVKPQANFRTVECWNSVILALASAGREREALDLFQEMEKTSA 296
Query: 373 ----EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
L ++ + A G + + A + L + N + +Y + G E ++
Sbjct: 297 LVPDAVTLNRILGACAAIGALDEGRAIHSRLKLHPDGPVGNSLVHMYAKCGSLMEARQVF 356
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
+ ++V W ++ A AH+G + E LE F+ MR I PD TF +LL+ CS ++
Sbjct: 357 EGMVERNVVGWTAMVVALAHHGFHGECLEKFRLMRHYGIDPDGVTFTNLLNCCSHAGLVS 416
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISA 547
G + + + +++D+ +CG + + ++ M + W ++ A
Sbjct: 417 RGWMFFAAMTQDHGMEPTAEQYEVMVDLVARCGRLEVAEELMEAMPFQPDEEGWLIVLGA 476
Query: 548 LGLNGFAQRA 557
G +RA
Sbjct: 477 SKTQGDVERA 486
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/503 (21%), Positives = 210/503 (41%), Gaps = 90/503 (17%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGA 59
PD + S+ ++I+A+ R G +AL ++ M F P F + ++ +C L + +G
Sbjct: 21 PDAD--SWMNLIAAFVRSGAEREALHLYAAM--DVFPPNPFVYPSVIKACSVLRDLAQGR 76
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ ++++ C DA TAL+ +Y + G L+ ++F + K+LV+W++++S + ++
Sbjct: 77 EIHRRIIQHQ-HCLDAVTSTALVDMYAKCGDLETAATIFSSIQEKTLVSWSAMISGYVRN 135
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD--YELL 177
+ +F + + + ++ S Q L+ G IH ++ + L+
Sbjct: 136 ERYSQAIGIFHRMNLEGLEPDDFILSSLLLACSKIQALDQGRTIHARILSSSSPAATNLV 195
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS---------------------------- 209
V +L+ MY C + A+ MF + +D ++
Sbjct: 196 VETALMVMYANCGSLIDAKSMFDGMSSKDSIAWATMIEAYFRYGDAGAGIAALRVMILEG 255
Query: 210 ------------WNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQ 256
WN++I ALA + +AL+L+ M + P+ T ++ +CA +
Sbjct: 256 VKPQANFRTVECWNSVILALASAGREREALDLFQEMEKTSALVPDAVTLNRILGACAAIG 315
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
G++IH+++ L D VG++LV YAKC +L A F + +N+V W A+++
Sbjct: 316 ALDEGRAIHSRL---KLHPDGPVGNSLVHMYAKCGSLMEARQVFEGMVERNVVGWTAMVV 372
Query: 317 GYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV 375
A L++ G P+ TF+
Sbjct: 373 ALAHHGFHGECLEKFRLMRHYGIDPDGVTFT----------------------------- 403
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQL 431
+L+ + +GL+S F A+ + P ++ + R G+ +L+ +
Sbjct: 404 --NLLNCCSHAGLVSRGWMFFAAMTQDHGMEPTAEQYEVMVDLVARCGRLEVAEELMEAM 461
Query: 432 E-RPDIVSWNIVIAACAHNGDYK 453
+PD W IV+ A GD +
Sbjct: 462 PFQPDEEGWLIVLGASKTQGDVE 484
>gi|15229753|ref|NP_190611.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75202753|sp|Q9SCT2.1|PP277_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g50420
gi|6561982|emb|CAB62471.1| putative protein [Arabidopsis thaliana]
gi|332645144|gb|AEE78665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 794
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 179/675 (26%), Positives = 319/675 (47%), Gaps = 56/675 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG------FEPTQFTFGGLL----SC 50
MP RN+V+ + + + YV + +I G F P ++ C
Sbjct: 48 MPQRNIVTLFGLSAVFE---YVSMGSSLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKC 104
Query: 51 DSLNPVEGA-QLQASVLKNGLFCA--DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV 107
S+ ++ A Q+ A VL G A + L+ +Y R G L++ VF+ MP +++V
Sbjct: 105 VSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVV 164
Query: 108 TWNSIVSIFGKH-GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
++N++ S + ++ F L + V S+F ++ + +D+ G ++
Sbjct: 165 SYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQ 224
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
+IK G+ ++V S++ MY C + SA ++F V RD V+WNT+I +++
Sbjct: 225 IIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDG 284
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
L + M + V P Q T+ V+N C+ L + LGK IHA++I + D+ + +AL+D
Sbjct: 285 LMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDM 344
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGY-RPNEFT 344
Y C ++ A F I N N+VSWN++I G + ++ + LL++ RP+E+T
Sbjct: 345 YCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYT 404
Query: 345 FSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
FS + ++ E +V G L+ VT L R+
Sbjct: 405 FSAAISATA----------------EPERFVHGKLLHGQ------------VTKLGYERS 436
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
V + +Y + + K+ ++ D+V W +I + G+ + ++ F M
Sbjct: 437 VFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYR 496
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT--EIISSDTFVCNMLIDMYGKCGS 522
+ D ++ S++ ACS + L G H L +T + + S VC L+DMYGK G
Sbjct: 497 EKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMS---VCGALVDMYGKNGK 553
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
++ IF+ ++ ++ W +++ A +G ++AL F ++ GF PD V +++L A
Sbjct: 554 YETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAA 613
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN-- 640
C H G +G L+ +M + G++ HY C+V+L+ + G + EA ++I P P N
Sbjct: 614 CSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSP-PGNNQ 671
Query: 641 ALIWRTFLEGCQRCR 655
A +WRT L C R
Sbjct: 672 AELWRTLLSACVNTR 686
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 155/593 (26%), Positives = 281/593 (47%), Gaps = 59/593 (9%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG-------------KHGFV 122
+ L+ +Y R L++ VF+ MP++++VT + ++F K G
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 123 EDCMFL-FCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL---LV 178
+ F+ E+ S V LT + L+ QIH LV+ G
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITV--------LKRARQIHALVLTAGAGAATESPYA 134
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-ALELYLRMSVDI 237
N+L++MY +C + A K+F + R+VVS+N + A + + +F A L M+ +
Sbjct: 135 NNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEY 194
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN +TF ++ CA L++ ++G S+++++IK +V V ++++ Y+ C +LE A
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESAR 254
Query: 298 LCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F ++N++ V+WN +I+G + +L G P +FT+S VL
Sbjct: 255 RIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNG----- 309
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
++G Y LG L+ + ++SD+LA ++P N + +Y
Sbjct: 310 -------CSKLG----SYSLGKLIHARI---IVSDSLA-----DLPL----DNALLDMYC 346
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF-KYMRAARIYPDNYTFV 475
G E + ++ P++VSWN +I+ C+ NG ++ + ++ + +R + PD YTF
Sbjct: 347 SCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFS 406
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
+ +SA ++ G LHG + K S FV L+ MY K S+ K+F+ M +
Sbjct: 407 AAISATAEPERFVHGKLLHGQVTKLGYERS-VFVGTTLLSMYFKNREAESAQKVFDVMKE 465
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
R+V+ WT +I G ++ A++ F EM + D +L +V+ AC ++R+G E+
Sbjct: 466 RDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG-EV 524
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
F + G + M +VD+ + G + AE I ++ P+ W + L
Sbjct: 525 FHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIF-SLASNPDLKCWNSML 576
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT---WTALISALGLNG 552
L +T+ + + N LI MY +C S+ + K+F++M RN++T +A+ + +
Sbjct: 11 LFVETDAAAEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGS 70
Query: 553 FAQRALEKFREMEFLGFKP-DRVA--LIAVLTACRHGGLVREGMELFER-MNRSYGVEPE 608
+ K + + F P + +A ++ + C +++ ++ + G E
Sbjct: 71 SLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATE 130
Query: 609 MDHY-HCVVDLLVRYGHLKEAEKIITTMP 636
+ + ++ + VR G L++A K+ MP
Sbjct: 131 SPYANNNLISMYVRCGSLEQARKVFDKMP 159
>gi|357501421|ref|XP_003620999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365545|gb|ABN09779.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496014|gb|AES77217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 601
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/443 (33%), Positives = 225/443 (50%), Gaps = 39/443 (8%)
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVF-PNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
NTII A F LY + S D F P+ TF ++ C+ G IH V+
Sbjct: 91 NTIINAHFSLRQFNHGFTLYNQFSKDCFFRPSSYTFTLILKGCSVSDAKRQGFQIHGVVL 150
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFL 329
KN D++VG++LVD Y K ++ A F E+S +++VSW A+I+GYA
Sbjct: 151 KNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYARCGDMVEARK 210
Query: 330 LIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
L + + V R AF ++ + Y K G +
Sbjct: 211 LFDGM-------------VDRDVAAFNVM---------------------IDGYVKMGRM 236
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
A + + + +++ G Y+ G +E L + +++SWN +I N
Sbjct: 237 DLARDLFDKMRVKNVISWTSMVHG-YSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQN 295
Query: 450 GDYKEVLELFKYMRA-ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
G + L+LF MR + + T VS+L A + L L LG +HG +++ ++ S
Sbjct: 296 GRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGFVQRNQLDGS-VH 354
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
VCN L+DMY KCG IG + +F EMT+++ +W ALI+ G+NG A+ ALE F M G
Sbjct: 355 VCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREG 414
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
F+P+++ + +VL+AC H GLV EG FE M R +G+ P+++HY C++DLL R G L EA
Sbjct: 415 FEPNQITMTSVLSACNHCGLVEEGRRCFEAMER-FGIVPQIEHYGCMIDLLGRAGRLDEA 473
Query: 629 EKIITTMPFPPNALIWRTFLEGC 651
EK+I MP+ PN +I +FL C
Sbjct: 474 EKLIQAMPYDPNEIILTSFLFAC 496
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 191/380 (50%), Gaps = 35/380 (9%)
Query: 37 FEPTQFTFGGLLSCDSLNPV--EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEV 94
F P+ +TF +L S++ +G Q+ VLKN FC D +VGT+L+ +Y + G +
Sbjct: 119 FRPSSYTFTLILKGCSVSDAKRQGFQIHGVVLKN-WFCLDLYVGTSLVDMYVKFGDVGFA 177
Query: 95 VSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNE 154
VF++M +SLV+W +++ + + G + + LF +V +VA +F +I G
Sbjct: 178 RKVFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVA----AFNVMIDGYVKM 233
Query: 155 QDLEFGEQI-HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTI 213
++ + + +KN ++ S+V+ Y + + A +F + ++V+SWN +
Sbjct: 234 GRMDLARDLFDKMRVKN-----VISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAM 288
Query: 214 IGALAESENFGKALELY--LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
I ++ AL+L+ +R +VD+ N+ T V V+ + A L LG +H V +N
Sbjct: 289 IRGYCQNGRSHDALKLFCEMRGNVDVEM-NEVTVVSVLPAVADLSALDLGGWVHGFVQRN 347
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLL 330
L+ V V +ALVD YAKC + A L F E++ K+ SWNALI GY + + ++ +
Sbjct: 348 QLDGSVHVCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVF 407
Query: 331 IELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV-----------LGSL 379
+L+ G+ PN+ T + VL + HC ++ G +E + G +
Sbjct: 408 AMMLREGFEPNQITMTSVLSAC-------NHCGLVEEGRRCFEAMERFGIVPQIEHYGCM 460
Query: 380 MTSYAKSGLISDALAFVTAL 399
+ ++G + +A + A+
Sbjct: 461 IDLLGRAGRLDEAEKLIQAM 480
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 135/253 (53%), Gaps = 8/253 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M R++VS+ ++I Y+RCG + +A ++F M++R G + ++
Sbjct: 184 MSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDL----- 238
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
A L + + + T+++ Y G +DE +F+ MP K++++WN+++ + ++G
Sbjct: 239 --ARDLFDKMRVKNVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNG 296
Query: 121 FVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
D + LFCE+ + +V + E + V V+ +++ L+ G +HG V +N D + V
Sbjct: 297 RSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGFVQRNQLDGSVHVC 356
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+LV+MY +C I A+ +F+++ +D SWN +I + +ALE++ M +
Sbjct: 357 NALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFE 416
Query: 240 PNQTTFVYVINSC 252
PNQ T V+++C
Sbjct: 417 PNQITMTSVLSAC 429
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 12/188 (6%)
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P +YTF +L CS G +HG++ K D +V L+DMY K G +G + K
Sbjct: 121 PSSYTFTLILKGCSVSDAKRQGFQIHGVVLKN-WFCLDLYVGTSLVDMYVKFGDVGFARK 179
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F+EM+ R++++WTA+I G A + F M D A ++ G
Sbjct: 180 VFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGM----VDRDVAAFNVMIDGYVKMGR 235
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ +LF++M + + +V G + EA + MP N L W +
Sbjct: 236 MDLARDLFDKMRVKNVIS-----WTSMVHGYSEDGDVDEARFLFDCMP-EKNVLSWNAMI 289
Query: 649 EG-CQRCR 655
G CQ R
Sbjct: 290 RGYCQNGR 297
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 223/409 (54%), Gaps = 10/409 (2%)
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+ SC L + K IHA +I+ DVF S L+ + L+ A F +I N N+
Sbjct: 22 LESCTTLSHL---KIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNL 78
Query: 309 VSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCL 363
+N+ I G++ P F ++ + G P+ T+ ++++ L Q H
Sbjct: 79 FIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQ 138
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
IIR G+++ YV SL+T Y+ G I A ++ V +++AG Y ++G
Sbjct: 139 IIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAG-YIKSGDVTS 197
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
KL ++ ++V+W+++I+ A N + + +EL+ +++ ++ + VS++++C+
Sbjct: 198 ARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAH 257
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
L L LG H I + ++ + + + L+DMY +CGSI ++ +F+++ R+ ++WT
Sbjct: 258 LGALELGERAHDYILRNKM-TVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTT 316
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSY 603
LI+ ++G+A++ALE F ME G P + AVL+AC HGGLV G+ELFE M R Y
Sbjct: 317 LIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDY 376
Query: 604 GVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+EP ++HY C+VDLL R G L EAEK + MP PNA IW L C+
Sbjct: 377 RIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACR 425
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 208/477 (43%), Gaps = 60/477 (12%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D F + L+ + LD VF + +L +NS + F + + +
Sbjct: 46 DVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSK 105
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM-------- 185
R+ + ++ ++ + + L+ G Q HG +I++GFD ++ V NSLV M
Sbjct: 106 RNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIK 165
Query: 186 -----------------------YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
Y + + SA K+F + +++V+W+ +I A++
Sbjct: 166 SASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSF 225
Query: 223 FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSA 282
F KA+ELY + + V N+T V VI SCA L LG+ H +++N + ++ +G+A
Sbjct: 226 FDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTA 285
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPN 341
LVD YA+C +++ A F ++ ++ +SW LI G+A + ++ + + G P
Sbjct: 286 LVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPR 345
Query: 342 EFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV------------LGSLMTSYAKSGLI 389
E TF+ VL + H ++ G E +E + G ++ ++G +
Sbjct: 346 EITFTAVLSAC-------SHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKL 398
Query: 390 SDALAFVTALNI-PRAVVPANIIAG--IYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
++A FV + + P A + ++ I+ + K L +L +P+ + ++++
Sbjct: 399 AEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIEL-KPEHSGYYVLLSNI 457
Query: 447 AHNGDYKEVLELFKYMRAAR--IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+ E +E + M R + P YT L K+ +G H I++ E
Sbjct: 458 YARTNKWENVENIRQMMKERGVVKPPGYT---LFEMDGKVHKFTIGDKTHPEIQQIE 511
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 34/282 (12%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQ 62
N+ +NS I +S + + ++ G P T+ L+ +C ++ G Q
Sbjct: 77 NLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAH 136
Query: 63 ASVLKNGLFCADAFVGTALLGLYG-------------RHGCLDEVV-------------- 95
++++G F +D +V +L+ +Y R CLD V
Sbjct: 137 GQIIRHG-FDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDV 195
Query: 96 ----SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
+F+ MP K+LVTW+ ++S + K+ F + + L+ L V E+ V VI
Sbjct: 196 TSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASC 255
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
++ LE GE+ H +++N L++ +LV+MY +C I A +F + RD +SW
Sbjct: 256 AHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWT 315
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
T+I A KALE + RM + P + TF V+++C+
Sbjct: 316 TLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACS 357
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 116/225 (51%), Gaps = 15/225 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP++N+V+++ +IS Y++ + + A+ ++ + + G + ++ SC L +E G
Sbjct: 205 MPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELG 264
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +L+N + + +GTAL+ +Y R G +D+ + VF+ +P + ++W ++++ F
Sbjct: 265 ERAHDYILRNKM-TVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAM 323
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVI----HGLSNEQDLEFGEQIHGLVIKNGFDY 174
HG+ E + F + ++ + E +F V+ HG E+ LE E +K +
Sbjct: 324 HGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFES-----MKRDYRI 378
Query: 175 ELLVAN--SLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
E + + +V++ + + AEK ++ ++ + W ++GA
Sbjct: 379 EPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGA 423
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/429 (31%), Positives = 229/429 (53%), Gaps = 9/429 (2%)
Query: 213 IIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
++ +LAES++F K L L+ + ++P+ T V+ S L+ I G+ +H +K
Sbjct: 1 MLKSLAESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTG 60
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI---LGYASKSSPTSIFL 329
LE D +V ++L+ YA +E H F E+ +++VSWN LI +G+ S+F
Sbjct: 61 LESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQ 120
Query: 330 LIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL---GSLMTSYAKS 386
+ + + +E T L + + L++ I R +E + +L+ + K
Sbjct: 121 RMSR-ESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVVTEFEMSVRTGNALVDMFCKC 179
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
G + A A ++ ++++G Y G+ +E +L + D+V W ++
Sbjct: 180 GCLDKARAIFDSMRDKNVKCWTSMVSG-YVSNGRTDEARELFERSPVKDVVLWTAMMNGY 238
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
+ E LELF+ M+ ARI PDN+ VSLL+ C++ L G +HG I++ + + D
Sbjct: 239 VQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIRENRV-TVD 297
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
V L+DMY KCG I +++ +F EM +R+ +WT+LI L NG + RAL+ + EME
Sbjct: 298 KVVGTALVDMYAKCGCIETALGVFYEMKERDTASWTSLIYGLATNGMSGRALDLYYEMEN 357
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
+G + D + +AVLTAC HGG V EG +F M + ++P+ +HY C++DLL R G L
Sbjct: 358 VGVRLDDITFVAVLTACSHGGFVAEGRRIFYSMTERHKIQPKSEHYSCLIDLLCRAGLLD 417
Query: 627 EAEKIITTM 635
EAE++I M
Sbjct: 418 EAEELIDKM 426
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 175/359 (48%), Gaps = 37/359 (10%)
Query: 26 LRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQASVLKNGLFCADAFVGTALLG 83
L +F + +G P FT +L S L V EG ++ +K GL +D++V +L+G
Sbjct: 15 LALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTGLE-SDSYVCNSLMG 73
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR-SEVALTES 142
+Y G ++ VF++MP + +V+WN ++S + HG ED + +F + R S + E
Sbjct: 74 MYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQRMSRESNLKADEG 133
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI---------- 192
+ V + S ++LE GE+I+ V+ F+ + N+LV+M+ +C +
Sbjct: 134 TIVSTLSACSVLKNLEIGERIYRYVVTE-FEMSVRTGNALVDMFCKCGCLDKARAIFDSM 192
Query: 193 -------WS--------------AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
W+ A ++F+ ++DVV W ++ + F +ALEL+
Sbjct: 193 RDKNVKCWTSMVSGYVSNGRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR 252
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
M + P+ V ++ CA GK IH + +N + D VG+ALVD YAKC
Sbjct: 253 CMQTARIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCG 312
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL 349
+E A F E+ ++ SW +LI G A+ S ++ L E+ +G R ++ TF VL
Sbjct: 313 CIETALGVFYEMKERDTASWTSLIYGLATNGMSGRALDLYYEMENVGVRLDDITFVAVL 371
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 207/430 (48%), Gaps = 37/430 (8%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
GE++HG +K G + + V NSL+ MY + K+F ++ RDVVSWN +I +
Sbjct: 49 GEKVHGYAVKTGLESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVG 108
Query: 220 SENFGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
F A+ ++ RMS + + ++ T V +++C+ L+N +G+ I+ V+ E V
Sbjct: 109 HGRFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVV-TEFEMSVR 167
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-----------KSSPTSI 327
G+ALVD + KC L+ A F + +KN+ W +++ GY S + SP
Sbjct: 168 TGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSGYVSNGRTDEARELFERSPVKD 227
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
+L + GY F+ + F+ +Q R+ +N +VL SL+T A++G
Sbjct: 228 VVLWTAMMNGY----VQFNRFDEALELFRCMQ----TARIRPDN--FVLVSLLTGCAQTG 277
Query: 388 LISDAL---AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
+ ++ + V + +Y + G + + +++ D SW +I
Sbjct: 278 ALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKERDTASWTSLIY 337
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL-HGLIKKTEI- 502
A NG L+L+ M + D+ TFV++L+ACS +A G + + + ++ +I
Sbjct: 338 GLATNGMSGRALDLYYEMENVGVRLDDITFVAVLTACSHGGFVAEGRRIFYSMTERHKIQ 397
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM---TDRNVI-TWTALISA---LGLNGFAQ 555
S+ + C LID+ + G + + ++ ++M D+ ++ + +L+SA G A+
Sbjct: 398 PKSEHYSC--LIDLLCRAGLLDEAEELIDKMHGERDKTLVPVYCSLLSAARNYGNVKIAE 455
Query: 556 RALEKFREME 565
R EK ++E
Sbjct: 456 RVAEKLEKVE 465
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 137/287 (47%), Gaps = 36/287 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLLS-CDSLNPVE- 57
MP+R+VVS+N +IS+Y G EDA+ +F M + + T LS C L +E
Sbjct: 91 MPERDVVSWNGLISSYVGHGRFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLKNLEI 150
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ V+ F G AL+ ++ + GCLD+ ++F+ M K++ W S+VS +
Sbjct: 151 GERIYRYVVTE--FEMSVRTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSGYV 208
Query: 118 KHGFVEDCMFLF---------------------------CELVR----SEVALTESSFVG 146
+G ++ LF EL R + + V
Sbjct: 209 SNGRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVS 268
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
++ G + LE G+ IHG + +N + +V +LV+MY +C I +A +F +++ RD
Sbjct: 269 LLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKERD 328
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
SW ++I LA + G+AL+LY M V + TFV V+ +C+
Sbjct: 329 TASWTSLIYGLATNGMSGRALDLYYEMENVGVRLDDITFVAVLTACS 375
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQ 60
P ++VV + ++++ Y + ++AL +F M P F LL+ C +E +
Sbjct: 224 PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTGALEQGK 283
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
++ D VGTAL+ +Y + GC++ + VF +M + +W S++ +G
Sbjct: 284 WIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKERDTASWTSLIYGLATNG 343
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSN 153
+ L+ E+ V L + +FV V+ S+
Sbjct: 344 MSGRALDLYYEMENVGVRLDDITFVAVLTACSH 376
>gi|449442080|ref|XP_004138810.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Cucumis sativus]
gi|449490224|ref|XP_004158542.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Cucumis sativus]
Length = 619
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/513 (29%), Positives = 258/513 (50%), Gaps = 39/513 (7%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
+VG LL Y R G L + VF++MP +S+VTW +I++ + E+ + LF + V+S
Sbjct: 123 YVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDLTEEALALFSDSVKS 182
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
V FV +++ + D E G QIHG+++K G L+V ++++ Y QC I SA
Sbjct: 183 GVLANGQMFVCILNLCAKRLDFELGRQIHGVIVK-GNRGNLIVDSAIIYFYAQCKDISSA 241
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
F+ + RDVV W ++I + ++ +A+ ++ M D PN+ + V+ +C
Sbjct: 242 FVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDEFLPNEFSVCSVLKACGEE 301
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
+ +G+ +H +IK ++ DVFVG++LVD YAKC NL + F + N+N V+W ++I
Sbjct: 302 RELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSII 361
Query: 316 LGYASKSSPTSIFLLIELLQLGYRP-NEFTFSHVLRSSLAFQL----LQLHCLIIRMGYE 370
GYA + L L++ P N T +LR+ + + ++H I++ ++
Sbjct: 362 AGYAREGLGEEALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSFQ 421
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
++ +L+ Y K R + A+++ L
Sbjct: 422 TNIHIGSTLVWFYCKC----------------RNQLKASMV----------------LQL 449
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+ D+VSW +I+ CAH G E LE K M + P+++T+ S L AC+K+ + G
Sbjct: 450 MPLRDVVSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEAVLQG 509
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+H KT + S+ FV + LI MY KCG + + ++F+ M RN+++W A+I
Sbjct: 510 KMIHSSANKTSAL-SNVFVGSALIYMYAKCGYVTEASQVFDSMPVRNLVSWKAMILCYAR 568
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
NG + AL+ M+ GF+ D L V AC
Sbjct: 569 NGLCREALKLMYRMQAEGFEVDDYILGTVYGAC 601
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 229/485 (47%), Gaps = 35/485 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
MP R+VV++ +II+ Y E+AL +F + G F +L+ L+ G
Sbjct: 148 MPMRSVVTWTAIINGYIDLDLTEEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELG 207
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ ++K + V +A++ Y + + FE M R+ +V W S+++ +
Sbjct: 208 RQIHGVIVKGNR--GNLIVDSAIIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQ 265
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + +F ++ E E S V+ E++L+ G Q+HGL+IK ++ V
Sbjct: 266 QGLGREAISMFSNMLSDEFLPNEFSVCSVLKACGEERELKIGRQLHGLIIKKIIKNDVFV 325
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SLV+MY +C + + ++F + R+ V+W +II A +AL L+ M +
Sbjct: 326 GTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSIIAGYAREGLGEEALNLFRLMKRQRI 385
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
N T V ++ +C ++ S+ G+ +HA+++KN+ + ++ +GS LV FY KC N A +
Sbjct: 386 PANNLTIVSILRACGSIEASLTGREVHAQIVKNSFQTNIHIGSTLVWFYCKCRNQLKASM 445
Query: 299 CFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
+ +++VSW A+I G A + ++ L +++ G PN FT+S L++ +
Sbjct: 446 VLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYSSTLKACAKMEA 505
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
+ + G ++ S A K+ +S+ V + + +Y
Sbjct: 506 V----------------LQGKMIHSSANKTSALSN-------------VFVGSALIYMYA 536
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G E ++ + ++VSW +I A NG +E L+L M+A D+Y +
Sbjct: 537 KCGYVTEASQVFDSMPVRNLVSWKAMILCYARNGLCREALKLMYRMQAEGFEVDDYILGT 596
Query: 477 LLSAC 481
+ AC
Sbjct: 597 VYGAC 601
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 228/491 (46%), Gaps = 41/491 (8%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
+H +++N + + V N+L++ Y + + A K+F ++ +R VV+W II + +
Sbjct: 109 VHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDLDL 168
Query: 223 FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSA 282
+AL L+ V N FV ++N CA + LG+ IH ++K ++ V SA
Sbjct: 169 TEEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVKGN-RGNLIVDSA 227
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPN 341
++ FYA+C ++ A + F + +++V W ++I + + +I + +L + PN
Sbjct: 228 IIYFYAQCKDISSAFVAFERMRRRDVVCWTSMITSCSQQGLGREAISMFSNMLSDEFLPN 287
Query: 342 EFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
EF+ VL++ + L QLH LII+ +N +V SL+ YAK G ++D+
Sbjct: 288 EFSVCSVLKACGEERELKIGRQLHGLIIKKIIKNDVFVGTSLVDMYAKCGNLADS----- 342
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
+ G+ NR + V+W +IA A G +E L
Sbjct: 343 ----------REVFDGMRNR-----------------NTVTWTSIIAGYAREGLGEEALN 375
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
LF+ M+ RI +N T VS+L AC + G +H I K ++ + + L+ Y
Sbjct: 376 LFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKNSF-QTNIHIGSTLVWFY 434
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
KC + + + M R+V++WTA+IS G ALE + M G +P+
Sbjct: 435 CKCRNQLKASMVLQLMPLRDVVSWTAIISGCAHLGHESEALEFLKNMIEEGVEPNSFTYS 494
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
+ L AC V +G + N++ + + ++ + + G++ EA ++ +MP
Sbjct: 495 STLKACAKMEAVLQGKMIHSSANKTSALS-NVFVGSALIYMYAKCGYVTEASQVFDSMPV 553
Query: 638 PPNALIWRTFL 648
N + W+ +
Sbjct: 554 -RNLVSWKAMI 563
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 185/395 (46%), Gaps = 41/395 (10%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
+++HA +++N ++VG+ L+ Y + L A F E+ +++V+W A+I GY
Sbjct: 107 RAVHAFILRNFTSFGIYVGNNLLSSYLRLGMLVDARKVFDEMPMRSVVTWTAIINGYIDL 166
Query: 322 S-SPTSIFLLIELLQLGYRPNEFTFSHVLR---SSLAFQL-LQLHCLIIRMGYENYEYVL 376
+ ++ L + ++ G N F +L L F+L Q+H +I++ G V
Sbjct: 167 DLTEEALALFSDSVKSGVLANGQMFVCILNLCAKRLDFELGRQIHGVIVK-GNRGNLIVD 225
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
+++ YA+ IS A FV ++ R D+
Sbjct: 226 SAIIYFYAQCKDISSA--FVA------------------------------FERMRRRDV 253
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
V W +I +C+ G +E + +F M + P+ ++ S+L AC + L +G LHGL
Sbjct: 254 VCWTSMITSCSQQGLGREAISMFSNMLSDEFLPNEFSVCSVLKACGEERELKIGRQLHGL 313
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
I K +II +D FV L+DMY KCG++ S ++F+ M +RN +TWT++I+ G +
Sbjct: 314 IIK-KIIKNDVFVGTSLVDMYAKCGNLADSREVFDGMRNRNTVTWTSIIAGYAREGLGEE 372
Query: 557 ALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
AL FR M+ + + ++++L AC G E+ ++ ++ + + +V
Sbjct: 373 ALNLFRLMKRQRIPANNLTIVSILRACGSIEASLTGREVHAQIVKN-SFQTNIHIGSTLV 431
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ + +A ++ MP + + W + GC
Sbjct: 432 WFYCKCRNQLKASMVLQLMPL-RDVVSWTAIISGC 465
>gi|297830768|ref|XP_002883266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329106|gb|EFH59525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 564
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/499 (29%), Positives = 250/499 (50%), Gaps = 40/499 (8%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
IHG + NGF L + + L+++Y + + A K+F + RDVVSW +I +
Sbjct: 34 IHGNSVTNGFGSNLQLNDMLIDLYLKQGDVKHARKLFDRIPKRDVVSWTAMISRFSRCGY 93
Query: 223 FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSA 282
AL L+ +M V NQ T+ V+ SC L G I + K ++ V SA
Sbjct: 94 HRDALLLFKQMHRQDVRANQFTYGSVLKSCKDLGCLKEGMQIQGCLEKGKCAGNLIVRSA 153
Query: 283 LVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPN 341
L+ YA+C +E A L F + +++VSWN++I GY + + + F L +L+ G +P+
Sbjct: 154 LLSLYARCGKMEDARLQFDSMKERDLVSWNSMIDGYTTNACVDTSFSLFQLMFAEGKKPD 213
Query: 342 EFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
FTF +LR+S+ + L QLH L I++G+ ++ SL+ +Y K G I++A
Sbjct: 214 CFTFGSLLRASIVVKCLEPVGQLHGLAIKLGFGRSSALIRSLVDAYVKCGSIANAW---- 269
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH-NGDYKEVL 456
KL + D++S +I A N +
Sbjct: 270 ----------------------------KLHEDTTKRDLISCTALITGFAQQNICTSDAF 301
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
++F M + D S+L C+ + ++ +G +HG K+ I D + N LIDM
Sbjct: 302 DIFNEMILMKTKMDEVVVSSMLKICTTIASVTVGRQIHGFALKSSQIRFDIALGNSLIDM 361
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
Y K G I +V F EM +++V +WT+LI+ G +G ++A++ + ME G KP+ V
Sbjct: 362 YAKSGDIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHEGIKPNDVTF 421
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
+++L+AC H G G ++F +M +G++ +H+ C++D+L R G+L+EA ++I +
Sbjct: 422 LSLLSACSHTGQTELGWKIFNKMINKHGIKAREEHFSCIIDMLARSGYLEEAYELIRSKD 481
Query: 637 --FPPNALIWRTFLEGCQR 653
++ W FL+ C+R
Sbjct: 482 GIISLSSSTWGAFLDACRR 500
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 213/412 (51%), Gaps = 19/412 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
+P R+VVS+ ++IS +SRCGY DAL +F M + QFT+G +L SC L + EG
Sbjct: 73 IPKRDVVSWTAMISRFSRCGYHRDALLLFKQMHRQDVRANQFTYGSVLKSCKDLGCLKEG 132
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+Q L+ G + V +ALL LY R G +++ F+ M + LV+WNS++ +
Sbjct: 133 MQIQG-CLEKGKCAGNLIVRSALLSLYARCGKMEDARLQFDSMKERDLVSWNSMIDGYTT 191
Query: 119 HGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ V+ LF +L+ +E + +F ++ + LE Q+HGL IK GF
Sbjct: 192 NACVDTSFSLF-QLMFAEGKKPDCFTFGSLLRASIVVKCLEPVGQLHGLAIKLGFGRSSA 250
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF--GKALELYLRMSV 235
+ SLV+ Y +C I +A K+ +D RD++S +I A+ +N A +++ M +
Sbjct: 251 LIRSLVDAYVKCGSIANAWKLHEDTTKRDLISCTALITGFAQ-QNICTSDAFDIFNEMIL 309
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLE 294
++ ++ C + + +G+ IH +K++ + D+ +G++L+D YAK ++E
Sbjct: 310 MKTKMDEVVVSSMLKICTTIASVTVGRQIHGFALKSSQIRFDIALGNSLIDMYAKSGDIE 369
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTF-------S 346
A L F E+ K++ SW +LI GY + +I L + G +PN+ TF S
Sbjct: 370 DAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHEGIKPNDVTFLSLLSACS 429
Query: 347 HVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
H ++ L +++ +I + G + E ++ A+SG + +A + +
Sbjct: 430 HTGQTELGWKIFNK--MINKHGIKAREEHFSCIIDMLARSGYLEEAYELIRS 479
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 126/526 (23%), Positives = 246/526 (46%), Gaps = 51/526 (9%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ + + NG F ++ + L+ LY + G + +F+ +P++ +V+W +++S F + G
Sbjct: 34 IHGNSVTNG-FGSNLQLNDMLIDLYLKQGDVKHARKLFDRIPKRDVVSWTAMISRFSRCG 92
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ D + LF ++ R +V + ++ V+ + L+ G QI G + K L+V +
Sbjct: 93 YHRDALLLFKQMHRQDVRANQFTYGSVLKSCKDLGCLKEGMQIQGCLEKGKCAGNLIVRS 152
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L+++Y +C + A F ++ RD+VSWN++I + + L+ M + P
Sbjct: 153 ALLSLYARCGKMEDARLQFDSMKERDLVSWNSMIDGYTTNACVDTSFSLFQLMFAEGKKP 212
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ TF ++ + ++ +H IK + +LVD Y KC ++ A
Sbjct: 213 DCFTFGSLLRASIVVKCLEPVGQLHGLAIKLGFGRSSALIRSLVDAYVKCGSIANAWKLH 272
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLI--ELLQLGYRPNEFTFSHVLR--SSLAFQ 356
+ + ++++S ALI G+A ++ TS I E++ + + +E S +L+ +++A
Sbjct: 273 EDTTKRDLISCTALITGFAQQNICTSDAFDIFNEMILMKTKMDEVVVSSMLKICTTIASV 332
Query: 357 LL--QLHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIA 412
+ Q+H ++ ++ LG SL+ YAKSG I DA LAF
Sbjct: 333 TVGRQIHGFALKSSQIRFDIALGNSLIDMYAKSGDIEDAVLAF----------------- 375
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+++ D+ SW +IA +G++++ ++L+ M I P++
Sbjct: 376 ----------------EEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHEGIKPNDV 419
Query: 473 TFVSLLSACSKLCNLALGSSL-HGLIKKTEIISSDT-FVCNMLIDMYGKCGSIGSSVKIF 530
TF+SLLSACS LG + + +I K I + + F C +IDM + G + + ++
Sbjct: 420 TFLSLLSACSHTGQTELGWKIFNKMINKHGIKAREEHFSC--IIDMLARSGYLEEAYELI 477
Query: 531 NE---MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+ + TW A + A +G Q L K + L +P +
Sbjct: 478 RSKDGIISLSSSTWGAFLDACRRHGNVQ--LSKVAASQLLSVEPKK 521
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 117/262 (44%), Gaps = 34/262 (12%)
Query: 4 RNVVSFNSIISAYSRCGY-VEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
R+++S ++I+ +++ DA +F MI + + +L C ++ V G Q
Sbjct: 278 RDLISCTALITGFAQQNICTSDAFDIFNEMILMKTKMDEVVVSSMLKICTTIASVTVGRQ 337
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ LK+ D +G +L+ +Y + G +++ V FE+M K + +W S+++ +G+HG
Sbjct: 338 IHGFALKSSQIRFDIALGNSLIDMYAKSGDIEDAVLAFEEMKEKDVRSWTSLIAGYGRHG 397
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
E + L+ + + + +F+ ++ S+ E G +I N
Sbjct: 398 NFEKAIDLYNRMEHEGIKPNDVTFLSLLSACSHTGQTELGWKIF---------------N 442
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
++N + GI + E+ F + II LA S +A EL +R I+
Sbjct: 443 KMINKH----GIKAREEHF-----------SCIIDMLARSGYLEEAYEL-IRSKDGIISL 486
Query: 241 NQTTFVYVINSCAGLQNSILGK 262
+ +T+ +++C N L K
Sbjct: 487 SSSTWGAFLDACRRHGNVQLSK 508
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/533 (29%), Positives = 252/533 (47%), Gaps = 75/533 (14%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
+Q+H I+ A+ ++++Y + A +FK ++ V++W ++I +
Sbjct: 24 AKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
F KAL ++ M P+ F V+ SC + + G+S+H +++ ++CD++
Sbjct: 83 QSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 280 GSALVDFYAKC------------------------DNLEGAHLC------------FSEI 303
G+AL++ YAK D A C F +
Sbjct: 143 GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVM 202
Query: 304 SNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF----QLL 358
K++VS+N +I GYA S ++ ++ E+ +P+ FT S VL + +
Sbjct: 203 PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGK 262
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
++H +IR G ++ Y+ SL+ YAKS I D+ + + +Y R
Sbjct: 263 EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS---------------ERVFSRLYCRD 307
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
G +SWN ++A NG Y E L LF+ M A++ P F S++
Sbjct: 308 G-----------------ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVI 350
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
AC+ L L LG LHG + + S+ F+ + L+DMY KCG+I ++ KIF+ M +
Sbjct: 351 PACAHLATLHLGKQLHGYVLRGGF-GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE 409
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
++WTA+I L+G A+ F EM+ G KP++VA +AVLTAC H GLV E F
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
M + YG+ E++HY V DLL R G L+EA I+ M P +W T L C
Sbjct: 470 MTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC 522
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 241/510 (47%), Gaps = 58/510 (11%)
Query: 6 VVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQA 63
V+++ S+I ++ AL F+ M G P F +L SC + + G +
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 64 SVLKNGLFCADAFVGTALLGLYGR-------------------------------HGCL- 91
+++ G+ C D + G AL+ +Y + C+
Sbjct: 130 FIVRLGMDC-DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIM 188
Query: 92 ----DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGV 147
D V VFE MPRK +V++N+I++ + + G ED + + E+ +++ + V
Sbjct: 189 PFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV 248
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
+ S D+ G++IHG VI+ G D ++ + +SLV+MY + A I +E++F + RD
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
+SWN+++ ++ + +AL L+ +M V P F VI +CA L LGK +H
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTS 326
V++ ++F+ SALVD Y+KC N++ A F ++ + VSW A+I+G+A +
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEA 428
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE---YVLGSLMTSY 383
+ L E+ + G +PN+ F VL + L+ GY N Y L + Y
Sbjct: 429 VSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE-----AWGYFNSMTKVYGLNQELEHY 483
Query: 384 A-------KSGLISDALAFVTALNI-PRAVVPANIIA--GIYNRTGQYNETVKLLSQLER 433
A ++G + +A F++ + + P V + +++ ++ + + + ++
Sbjct: 484 AAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDS 543
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
++ ++ ++ A NG +KE+ +L MR
Sbjct: 544 ENMGAYVLMCNMYASNGRWKEMAKLRLRMR 573
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 221/515 (42%), Gaps = 91/515 (17%)
Query: 98 FEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL 157
F+ + ++ W S++ F + F E+ S + F V+ + DL
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 158 EFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG-------------------------- 191
FGE +HG +++ G D +L N+L+NMY + G
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 192 ----------IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
I S ++F+ + +DVVS+NTII A+S + AL + M + P+
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
T V+ + + I GK IH VI+ ++ DV++GS+LVD YAK +E + FS
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 302 EISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
+ ++ +SWN+L+ GY ++ L +++ +P FS V+ + L
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
QLH ++R G+ + ++ +L+ Y+K G I A +N+
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV--------------- 406
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
D VSW +I A +G E + LF+ M+ + P+ FV+
Sbjct: 407 -----------------LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVA 449
Query: 477 LLSACSK--LCNLALG-----SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+L+ACS L + A G + ++GL ++ E ++ + D+ G+ G + +
Sbjct: 450 VLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAA-------VADLLGRAGKLEEAYNF 502
Query: 530 FNEM-TDRNVITWTALISALGLNG---FAQRALEK 560
++M + W+ L+S+ ++ A++ EK
Sbjct: 503 ISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEK 537
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 147/255 (57%), Gaps = 3/255 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
MP ++VVS+N+II+ Y++ G EDALRM M +P FT +L + ++ ++G
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ V++ G+ +D ++G++L+ +Y + +++ VF + + ++WNS+V+ + +
Sbjct: 262 KEIHGYVIRKGI-DSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + LF ++V ++V +F VI ++ L G+Q+HG V++ GF + +
Sbjct: 321 NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFI 380
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
A++LV+MY +C I +A K+F + + D VSW II A + +A+ L+ M V
Sbjct: 381 ASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Query: 239 FPNQTTFVYVINSCA 253
PNQ FV V+ +C+
Sbjct: 441 KPNQVAFVAVLTACS 455
>gi|168041820|ref|XP_001773388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675264|gb|EDQ61761.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 748
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 163/663 (24%), Positives = 311/663 (46%), Gaps = 52/663 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQL 61
++NV ++ +I Y+ + EDA+ ++ M G +P + TF +L +C S ++ +
Sbjct: 68 EKNVFNWTIMIGGYAENNHFEDAIEVYNKMRQNGVQPNEITFFNILKACTSPMALKWGRK 127
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+++ F +D +G AL+ +Y R G +D+ VF M + ++TWN ++ +HG
Sbjct: 128 IHDHIRHAGFQSDLRLGNALIHMYARCGSMDDARLVFNGMVDRDIITWNVMIGRLVQHGR 187
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ LF ++ R ++++ +++ + L + +++H ++ G + ++ V +
Sbjct: 188 GHEAFSLFLQMQREGFVPDTTTYLSMLNANACTGALGWVKEVHSHALRAGLESDVRVGTA 247
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
LV+MY + I A +F + R++++WN++IG LA+ +A L+ +M + + P+
Sbjct: 248 LVHMYARSGSIKDARLVFDKMTERNIITWNSMIGGLAQHGCGLEAFSLFRQMQREGLVPD 307
Query: 242 QTTFVYVI-NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
T+V ++ N+CA + +H K L+ DV VG+ALV YAKC +++ A F
Sbjct: 308 AITYVNILNNACASTGALQWVRKVHDDAAKVGLDFDVRVGNALVHMYAKCGSMDDARRVF 367
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL- 358
+ ++++VSW +I G A F L +++ + G+ PN T+ +L + L
Sbjct: 368 YGMVDRDVVSWTVMIGGLAQHGFGREAFSLFLQMQREGFVPNLTTYLSILNGKASTGALE 427
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
++H + +++ V +L+ YAK G I +A
Sbjct: 428 WVKEVHTHAVNAELDSHLRVGNALIHMYAKCGSIENARL--------------------- 466
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ ++E DI+SWN +I A NG +E F M+ PD T V
Sbjct: 467 -----------VFDRMEDRDIISWNAMIGGLAQNGHGREAFSHFLEMQREGFIPDAATLV 515
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+L+AC+ L +H + + SD V + L+ Y KCG I + +F M
Sbjct: 516 SILNACASTRALDRVKEVHSHALEAG-LESDLRVGSALVHTYAKCGRIDDARLVFEGMAS 574
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
R++ITW +I L +G A F +M+ +GF PD + +++L G + E +E
Sbjct: 575 RDIITWNVMIGGLAQHGREHEAFSLFLQMQDVGFVPDAITYLSILG----GNVSIEALEW 630
Query: 596 FERMNR-----SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP-NALIWRTFLE 649
+ ++R + +P + +V + + G + A+ T P + W L+
Sbjct: 631 VKEVHRHAVRAGFDTDPRVS--SALVHMYTKCGDIDNAKLHFTPNMLPDLDGTAWGDLLD 688
Query: 650 GCQ 652
C+
Sbjct: 689 ACR 691
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/516 (27%), Positives = 259/516 (50%), Gaps = 43/516 (8%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
+V L+ +Y R G L VF+ + K++ W ++ + ++ ED + ++ ++ ++
Sbjct: 41 YVANKLMSIYIRCGRLQNTREVFDTLVEKNVFNWTIMIGGYAENNHFEDAIEVYNKMRQN 100
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
V E +F ++ ++ L++G +IH + GF +L + N+L++MY +C + A
Sbjct: 101 GVQPNEITFFNILKACTSPMALKWGRKIHDHIRHAGFQSDLRLGNALIHMYARCGSMDDA 160
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI--NSCA 253
+F + RD+++WN +IG L + +A L+L+M + P+ TT++ ++ N+C
Sbjct: 161 RLVFNGMVDRDIITWNVMIGRLVQHGRGHEAFSLFLQMQREGFVPDTTTYLSMLNANACT 220
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
G + K +H+ ++ LE DV VG+ALV YA+ +++ A L F +++ +NI++WN+
Sbjct: 221 GALGWV--KEVHSHALRAGLESDVRVGTALVHMYARSGSIKDARLVFDKMTERNIITWNS 278
Query: 314 LILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLR----SSLAFQLL-QLHCLIIRM 367
+I G A F L +Q G P+ T+ ++L S+ A Q + ++H ++
Sbjct: 279 MIGGLAQHGCGLEAFSLFRQMQREGLVPDAITYVNILNNACASTGALQWVRKVHDDAAKV 338
Query: 368 GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
G + V +L+ YAK G + DA + G+ +R
Sbjct: 339 GLDFDVRVGNALVHMYAKCGSMDDA---------------RRVFYGMVDR---------- 373
Query: 428 LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNL 487
D+VSW ++I A +G +E LF M+ P+ T++S+L+ + L
Sbjct: 374 -------DVVSWTVMIGGLAQHGFGREAFSLFLQMQREGFVPNLTTYLSILNGKASTGAL 426
Query: 488 ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISA 547
+H E + S V N LI MY KCGSI ++ +F+ M DR++I+W A+I
Sbjct: 427 EWVKEVHTHAVNAE-LDSHLRVGNALIHMYAKCGSIENARLVFDRMEDRDIISWNAMIGG 485
Query: 548 LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
L NG + A F EM+ GF PD L+++L AC
Sbjct: 486 LAQNGHGREAFSHFLEMQREGFIPDAATLVSILNAC 521
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 156/569 (27%), Positives = 278/569 (48%), Gaps = 46/569 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEG-- 58
M DR+++++N +I + G +A +FL M GF P T+ +L+ ++ G
Sbjct: 167 MVDRDIITWNVMIGRLVQHGRGHEAFSLFLQMQREGFVPDTTTYLSMLNANACTGALGWV 226
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ + L+ GL +D VGTAL+ +Y R G + + VF+ M ++++TWNS++ +
Sbjct: 227 KEVHSHALRAGLE-SDVRVGTALVHMYARSGSIKDARLVFDKMTERNIITWNSMIGGLAQ 285
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGL-SNEQDLEFGEQIHGLVIKNGFDYELL 177
HG + LF ++ R + ++V +++ ++ L++ ++H K G D+++
Sbjct: 286 HGCGLEAFSLFRQMQREGLVPDAITYVNILNNACASTGALQWVRKVHDDAAKVGLDFDVR 345
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-ALELYLRMSVD 236
V N+LV+MY +C + A ++F + RDVVSW +IG LA+ FG+ A L+L+M +
Sbjct: 346 VGNALVHMYAKCGSMDDARRVFYGMVDRDVVSWTVMIGGLAQ-HGFGREAFSLFLQMQRE 404
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
PN TT++ ++N A K +H + L+ + VG+AL+ YAKC ++E A
Sbjct: 405 GFVPNLTTYLSILNGKASTGALEWVKEVHTHAVNAELDSHLRVGNALIHMYAKCGSIENA 464
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF 355
L F + +++I+SWNA+I G A F +E+ + G+ P+ T +L + +
Sbjct: 465 RLVFDRMEDRDIISWNAMIGGLAQNGHGREAFSHFLEMQREGFIPDAATLVSILNACAST 524
Query: 356 QLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ L ++H + G E+ V +L+ +YAK G I DA +
Sbjct: 525 RALDRVKEVHSHALEAGLESDLRVGSALVHTYAKCGRIDDARL---------------VF 569
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
G+ +R DI++WN++I A +G E LF M+ PD
Sbjct: 570 EGMASR-----------------DIITWNVMIGGLAQHGREHEAFSLFLQMQDVGFVPDA 612
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF- 530
T++S+L + L +H + +D V + L+ MY KCG I ++ F
Sbjct: 613 ITYLSILGGNVSIEALEWVKEVHRHAVRAGF-DTDPRVSSALVHMYTKCGDIDNAKLHFT 671
Query: 531 -NEMTDRNVITWTALISALGLNGFAQRAL 558
N + D + W L+ A +G + A+
Sbjct: 672 PNMLPDLDGTAWGDLLDACRNHGDVEMAV 700
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/524 (24%), Positives = 251/524 (47%), Gaps = 49/524 (9%)
Query: 137 VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE 196
+++ ++V ++ + +DL +Q+H +IK+ + VAN L+++Y +C + +
Sbjct: 1 ISIDSYTYVDILQKVFKHKDLVLAKQVHECIIKSEMEQHPYVANKLMSIYIRCGRLQNTR 60
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
++F + ++V +W +IG AE+ +F A+E+Y +M + V PN+ TF ++ +C
Sbjct: 61 EVFDTLVEKNVFNWTIMIGGYAENNHFEDAIEVYNKMRQNGVQPNEITFFNILKACTSPM 120
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
G+ IH + + D+ +G+AL+ YA+C +++ A L F+ + +++I++WN +I
Sbjct: 121 ALKWGRKIHDHIRHAGFQSDLRLGNALIHMYARCGSMDDARLVFNGMVDRDIITWNVMIG 180
Query: 317 GYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYEN 371
F L +++ + G+ P+ T+ +L ++ L ++H +R G E+
Sbjct: 181 RLVQHGRGHEAFSLFLQMQREGFVPDTTTYLSMLNANACTGALGWVKEVHSHALRAGLES 240
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
V +L+ YA+SG I DA + ++
Sbjct: 241 DVRVGTALVHMYARSGSIKDARL--------------------------------VFDKM 268
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL-SACSKLCNLALG 490
+I++WN +I A +G E LF+ M+ + PD T+V++L +AC+ L
Sbjct: 269 TERNIITWNSMIGGLAQHGCGLEAFSLFRQMQREGLVPDAITYVNILNNACASTGALQWV 328
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+H K + D V N L+ MY KCGS+ + ++F M DR+V++WT +I L
Sbjct: 329 RKVHDDAAKVG-LDFDVRVGNALVHMYAKCGSMDDARRVFYGMVDRDVVSWTVMIGGLAQ 387
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
+GF + A F +M+ GF P+ +++L G G + + ++ V E+D
Sbjct: 388 HGFGREAFSLFLQMQREGFVPNLTTYLSILN-----GKASTGALEWVKEVHTHAVNAELD 442
Query: 611 HY----HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + ++ + + G ++ A + M + + W + G
Sbjct: 443 SHLRVGNALIHMYAKCGSIENARLVFDRME-DRDIISWNAMIGG 485
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 161/578 (27%), Positives = 274/578 (47%), Gaps = 34/578 (5%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVR-S 135
+G A L ++ R G L + VF M ++L +WN +V + K G+ ++ + L+ ++
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVG 190
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSA 195
V +F V+ DL G ++H V++ G++ ++ V N+L+ MY +C + SA
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 196 EKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGL 255
+F + RD++SWN +I E+ + L+L+ M V P+ T VI++C L
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 256 QNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI 315
+ LG+ IHA VI D+ V ++L Y + A FS + K+IVSW +I
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMI 370
Query: 316 LGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEY 374
GY P ++ Q +P+E T + VL + L G E ++
Sbjct: 371 SGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD-------TGVELHKL 423
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
+ + + SY V+ AN + +Y++ ++ + + + R
Sbjct: 424 AIKARLISY---------------------VIVANNLINMYSKCKCIDKALDIFHNIPRK 462
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
+++SW +IA N E L F+ M+ + P+ T + L+AC+++ L G +H
Sbjct: 463 NVISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQPNAITLTAALAACARIGALMCGKEIH 521
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
+ +T + D F+ N L+DMY +CG + + FN ++V +W L++ G
Sbjct: 522 AHVLRTGV-GLDDFLPNALLDMYVRCGRMNIAWNQFNSQK-KDVSSWNILLTGYSERGQG 579
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHC 614
+E F M +PD + I++L C +VR+G+ F +M YGV P + HY C
Sbjct: 580 SVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKME-EYGVTPNLKHYAC 638
Query: 615 VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
VVDLL R G L+EA K I MP P+ +W L C+
Sbjct: 639 VVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACR 676
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 144/557 (25%), Positives = 263/557 (47%), Gaps = 47/557 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI-NRGFEPTQFTFGGLL-SCDSL-NPVE 57
M +RN+ S+N ++ Y++ GY ++A+ ++ M+ G +P +TF +L +C + +
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ V++ G + D V AL+ +Y + G + +F+ MPR+ +++WN+++S +
Sbjct: 215 GREVHVHVVRYG-YELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++G + + LF + V + VI D G IH VI GF ++
Sbjct: 274 ENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 178 VANSLVNMYFQCAGIW-SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V NSL MY AG W AEK+F ++ +D+VSW T+I + KA++ Y M D
Sbjct: 334 VCNSLTQMYLY-AGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQD 392
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P++ T V+++CA L + G +H IK L V V + L++ Y+KC ++ A
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA 452
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F I KN++SW ++I G + + +++ +PN T + L +
Sbjct: 453 LDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMTLQPNAITLTAALAACARIG 512
Query: 357 LL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L ++H ++R G +++ +L+ Y + G ++ A
Sbjct: 513 ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAW------------------- 553
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
Q+N ++ D+ SWNI++ + G V+ELF M AR+ PD
Sbjct: 554 ------NQFNS--------QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEI 599
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+SLL C K + G +++ + + + C ++D+ G+ G + + K
Sbjct: 600 TFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYAC--VVDLLGRAGELQEAHKFIQ 657
Query: 532 EM-TDRNVITWTALISA 547
+M + W AL++A
Sbjct: 658 KMPVTPDPAVWGALLNA 674
>gi|302767314|ref|XP_002967077.1| hypothetical protein SELMODRAFT_87452 [Selaginella moellendorffii]
gi|300165068|gb|EFJ31676.1| hypothetical protein SELMODRAFT_87452 [Selaginella moellendorffii]
Length = 653
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 166/618 (26%), Positives = 287/618 (46%), Gaps = 59/618 (9%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G ++ + K D F+ L +YG+ G DE +F+ + K++ +W +++ F
Sbjct: 38 QGQRIHDHIRKFHGLSQDRFLANCLADMYGKCGRPDESRKIFDAIADKNVFSWTILIAAF 97
Query: 117 GKH-GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ + + L + +S VA ++FV V+ S + L+ +H + G D E
Sbjct: 98 SESVDRRWEALHLLRFMDQSGVAPNAATFVSVLVACSELRCLDAVIALHARIASLGLDLE 157
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
++V +LVN Y +C + A+ F + I++ + W +I A A++ +FG A+ELY RM +
Sbjct: 158 IVVGTALVNAYGKCGSVDRAKNAFAKMPIKNSICWTAVITANAQNGHFGPAMELYERMVL 217
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILG--KSIHAKVIKNALE--------CDVFVGSALVD 285
+ + P++ TFV +++CA S +++ A+ I + V +AL++
Sbjct: 218 EGLKPDRVTFVSALDACASSPRSPPPRYRAVVAQRIASLAAAVAASGHGSSPIVAAALLN 277
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSI-----FLLIELLQLGYRP 340
Y K L+ A F + +N V WN +I A+ S +I F L RP
Sbjct: 278 MYGKLGELDRAREIFHSLPERNAVMWNVMI---AASSQAGAIHEALGFFWAMNLDGAARP 334
Query: 341 NEFTFSHVLRSSLAFQL-----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
+ TF+ ++ + A + +++H ++ G + +L +L+ YAK G DA
Sbjct: 335 DGSTFTSIISACAAGGVPPDLAVRIHAALLSSGVTLDDPLLTALLGLYAKCGRTDDAR-- 392
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
++ S++ +V W +++A A +G +
Sbjct: 393 ------------------------------RVFSEIREKGVVPWTALVSALAADGRSSDA 422
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
+ + M + P+ YTFV+ + A S+L +A G SLH + SD FV N ++
Sbjct: 423 VAALRRMELEGVRPNEYTFVAAIEAASQL-GIAHGRSLHARATSAG-LDSDPFVANTVMA 480
Query: 516 MYGKCGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
MY CGSI + +F+ M RN+++W +I AL +G + +L + EME G P
Sbjct: 481 MYASCGSIAEARAVFDGMGHRRNLVSWNCMIEALARHGHSLESLALYSEMELDGVPPSAA 540
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
++VL AC H G V G F R YG++ E +H CVVDLL R G L AE I +
Sbjct: 541 TFVSVLAACSHVGEVELGYHYFVAFRRDYGIQAEAEHIGCVVDLLGRAGWLDSAESFIQS 600
Query: 635 MPFPPNALIWRTFLEGCQ 652
+P + W L C+
Sbjct: 601 LPAADLSSSWAVLLGACK 618
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 145/577 (25%), Positives = 260/577 (45%), Gaps = 54/577 (9%)
Query: 1 MPDRNVVSFNSIISAYSRC-GYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEG 58
+ D+NV S+ +I+A+S +AL + +M G P TF +L +C L ++
Sbjct: 82 IADKNVFSWTILIAAFSESVDRRWEALHLLRFMDQSGVAPNAATFVSVLVACSELRCLDA 141
Query: 59 A-QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
L A + GL + VGTAL+ YG+ G +D + F MP K+ + W ++++
Sbjct: 142 VIALHARIASLGLDL-EIVVGTALVNAYGKCGSVDRAKNAFAKMPIKNSICWTAVITANA 200
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN------- 170
++G M L+ +V + +FV + ++ + +V +
Sbjct: 201 QNGHFGPAMELYERMVLEGLKPDRVTFVSALDACASSPR-SPPPRYRAVVAQRIASLAAA 259
Query: 171 ----GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
G +VA +L+NMY + + A ++F + R+ V WN +I A +++ +A
Sbjct: 260 VAASGHGSSPIVAAALLNMYGKLGELDRAREIFHSLPERNAVMWNVMIAASSQAGAIHEA 319
Query: 227 LELYLRMSVD-IVFPNQTTFVYVINSCA-GLQNSILGKSIHAKVIKNALECDVFVGSALV 284
L + M++D P+ +TF +I++CA G L IHA ++ + + D + +AL+
Sbjct: 320 LGFFWAMNLDGAARPDGSTFTSIISACAAGGVPPDLAVRIHAALLSSGVTLDDPLLTALL 379
Query: 285 DFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEF 343
YAKC + A FSEI K +V W AL+ A+ + + ++L G RPNE+
Sbjct: 380 GLYAKCGRTDDARRVFSEIREKGVVPWTALVSALAADGRSSDAVAALRRMELEGVRPNEY 439
Query: 344 TFSHVLRSSLAFQLLQ---LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
TF + ++ + LH G ++ +V ++M YA G I++A A
Sbjct: 440 TFVAAIEAASQLGIAHGRSLHARATSAGLDSDPFVANTVMAMYASCGSIAEARA------ 493
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
+++ G R ++VSWN +I A A +G E L L+
Sbjct: 494 -------------VFDGMGH------------RRNLVSWNCMIEALARHGHSLESLALYS 528
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M + P TFVS+L+ACS + + LG ++ I ++ ++D+ G+
Sbjct: 529 EMELDGVPPSAATFVSVLAACSHVGEVELGYHYFVAFRRDYGIQAEAEHIGCVVDLLGRA 588
Query: 521 GSIGSSVKIFNEMTDRNV-ITWTALISALGLNGFAQR 556
G + S+ + ++ +W L+ A +G A R
Sbjct: 589 GWLDSAESFIQSLPAADLSSSWAVLLGACKTHGDATR 625
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 5/185 (2%)
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M A+ T+ ++L C+ L G +H I+K +S D F+ N L DMYGKCG
Sbjct: 11 MERAKSQAAPSTYAAVLRRCADDRALEQGQRIHDHIRKFHGLSQDRFLANCLADMYGKCG 70
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR--ALEKFREMEFLGFKPDRVALIAV 579
S KIF+ + D+NV +WT LI+A +R AL R M+ G P+ ++V
Sbjct: 71 RPDESRKIFDAIADKNVFSWTILIAAFS-ESVDRRWEALHLLRFMDQSGVAPNAATFVSV 129
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
L AC + + L R+ S G++ E+ +V+ + G + A+ MP
Sbjct: 130 LVACSELRCLDAVIALHARIA-SLGLDLEIVVGTALVNAYGKCGSVDRAKNAFAKMPI-K 187
Query: 640 NALIW 644
N++ W
Sbjct: 188 NSICW 192
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 160/515 (31%), Positives = 244/515 (47%), Gaps = 35/515 (6%)
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL--LVANSLVNMYFQCAGIWSAE 196
L+ +S ++ + Q G H +IK D L + N LVNMY + SA+
Sbjct: 4 LSPNSLASLVESAVSTQCSRLGRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQ 62
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQ 256
+ R VV+W +I ++ F AL + M D + PN TF + L+
Sbjct: 63 LLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLR 122
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+ ++GK +HA +K DVFVG + D Y+K E A F E+ +NI +WNA +
Sbjct: 123 SPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLS 182
Query: 317 GYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV 375
+ ++ IE G+ PN TF L + L R+G + + +V
Sbjct: 183 NSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYL-------RLGRQLHGFV 235
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
L +SG +D V AN + Y + Q + + S + +P+
Sbjct: 236 L--------QSGFEAD-------------VSVANGLIDFYGKCHQVGCSEIIFSGISKPN 274
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
VSW +I + N + ++ +F R I P ++ S+LSAC+ L L +G S+H
Sbjct: 275 DVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHT 334
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
L K ++ + FV + L+DMYGKCGSI + + F+EM +RN++TW A+I G A
Sbjct: 335 LAVKACVV-GNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQAD 393
Query: 556 RALEKFREMEFLGFK--PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
A+ F EM + P+ V + VL+AC G V GME+FE M YG+EP +HY
Sbjct: 394 MAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYA 453
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
CVVDLL R G +++A + I MP P +W L
Sbjct: 454 CVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALL 488
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 206/414 (49%), Gaps = 11/414 (2%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSL-NPVEGA 59
P+R+VV++ ++I+ + G AL F M +P FTF + SL +P+ G
Sbjct: 69 PNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGK 128
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ A +K G +D FVG + +Y + G +E +F++MP +++ TWN+ +S
Sbjct: 129 QVHALAVKAGQI-SDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLE 187
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G +D + F E +F ++ + L G Q+HG V+++GF+ ++ VA
Sbjct: 188 GRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVA 247
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L++ Y +C + +E +F + + VSW ++I + +++ KA ++LR + +
Sbjct: 248 NGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIE 307
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P V+++CAGL +GKS+H +K + ++FVGSALVD Y KC ++E A
Sbjct: 308 PTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERA 367
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR---PNEFTFSHVLRS----- 351
F E+ +N+V+WNA+I GYA + L + + G PN TF VL +
Sbjct: 368 FDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAG 427
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
S+ + + R G E ++ ++G++ A F+ + I V
Sbjct: 428 SVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTV 481
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 188/422 (44%), Gaps = 49/422 (11%)
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIK---NALECDVFVGSALVDFYAKCDNLEG 295
F + + ++ S Q S LG++ HA++IK N L F+ + LV+ Y+K D
Sbjct: 3 FLSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPS--FIYNHLVNMYSKLDRPNS 60
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTS-IFLLIELLQLGYRPNEFTF------SHV 348
A L S N+++V+W ALI G TS +F + + +PN+FTF S
Sbjct: 61 AQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGS 120
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
LRS L + Q+H L + K+G ISD +A +
Sbjct: 121 LRSPLVGK--QVHALAV-------------------KAGQISDVFVGCSAFD-------- 151
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+Y++ G E K+ ++ +I +WN ++ G Y + L F R
Sbjct: 152 -----MYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWE 206
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P+ TF + L+AC+ L LG LHG + ++ +D V N LID YGKC +G S
Sbjct: 207 PNLITFCAFLNACAGASYLRLGRQLHGFVLQSG-FEADVSVANGLIDFYGKCHQVGCSEI 265
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
IF+ ++ N ++W ++I + N ++A F G +P + +VL+AC +
Sbjct: 266 IFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSV 325
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ G + ++ V + +VD+ + G +++AE+ MP N + W +
Sbjct: 326 LEVGKSVHTLAVKAC-VVGNIFVGSALVDMYGKCGSIEDAERAFDEMP-ERNLVTWNAMI 383
Query: 649 EG 650
G
Sbjct: 384 GG 385
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 158/329 (48%), Gaps = 23/329 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGA- 59
MP+RN+ ++N+ +S G +DAL F+ + G+EP TF C LN GA
Sbjct: 169 MPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITF-----CAFLNACAGAS 223
Query: 60 ------QLQASVLKNGLFCADAFVGTALLGLYGR-H--GCLDEVVSVFEDMPRKSLVTWN 110
QL VL++G F AD V L+ YG+ H GC E+ +F + + + V+W
Sbjct: 224 YLRLGRQLHGFVLQSG-FEADVSVANGLIDFYGKCHQVGC-SEI--IFSGISKPNDVSWC 279
Query: 111 SIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
S++ + ++ E +F + + T+ V+ + LE G+ +H L +K
Sbjct: 280 SMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKA 339
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
+ V ++LV+MY +C I AE+ F ++ R++V+WN +IG A A+ L+
Sbjct: 340 CVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLF 399
Query: 231 LRMSVDI--VFPNQTTFVYVINSCAGLQNSILGKSIHAKVI-KNALECDVFVGSALVDFY 287
M+ V PN TFV V+++C+ + +G I + + +E + +VD
Sbjct: 400 DEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLL 459
Query: 288 AKCDNLEGAHLCFSEISNKNIVS-WNALI 315
+ +E A+ ++ + VS W AL+
Sbjct: 460 GRAGMVEQAYQFIKKMPIRPTVSVWGALL 488
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 141/463 (30%), Positives = 237/463 (51%), Gaps = 7/463 (1%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A +F ++ ++ WN +I L++S+ A+ Y M + + TF+++ SCA
Sbjct: 25 AHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCAR 84
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNAL 314
+ + G+ + +K E FV +AL+ Y L A F + +++VSWN++
Sbjct: 85 VSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSI 144
Query: 315 ILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE 373
I GY + + L E+ + R + T + ++ ++ +++ E+
Sbjct: 145 ICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGV 204
Query: 374 ----YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
Y+ +L+ Y + G+I A + + +V N + Y + G KL +
Sbjct: 205 VVDLYLGNTLIDMYGRRGMIDFAGRVFYQMK-EKNIVSWNAMIMGYAKVGNLVAAKKLFN 263
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLAL 489
++ D++SW +I + + E ++LF+ M + + PD T + LSAC+ L +L
Sbjct: 264 EMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDA 323
Query: 490 GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
G ++H I+K +I SD FV N LIDMY KCG + ++++FN+M R+ ++WT++IS L
Sbjct: 324 GEAVHDYIRKHDI-KSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLA 382
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
+NGFA+ AL F +M G P + VL AC H GLV +G+E F+ M +Y + PEM
Sbjct: 383 VNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEM 442
Query: 610 DHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
HY CVVDLL R G+L A I MP P+ +IWR L C+
Sbjct: 443 KHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACK 485
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 223/483 (46%), Gaps = 73/483 (15%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQASVL 66
+N +I S+ DA+ + M +G + + TF L SC ++ V +G ++ +
Sbjct: 40 WNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSM 99
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K G F + +FV AL+ +Y G L VF+ M + +V+WNSI+ + + + +
Sbjct: 100 KLG-FESXSFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVL 158
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
LF E+ V + + I + E G+ + + ++G +L + N+L++MY
Sbjct: 159 DLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMY 218
Query: 187 FQCAGI-----------------W--------------SAEKMFKDVEIRDVVSWNTIIG 215
+ I W +A+K+F ++ RDV+SW ++I
Sbjct: 219 GRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMII 278
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+ ++ +A++L+ M V +V P++ T +++CA L + G+++H + K+ ++
Sbjct: 279 GYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRKHDIKS 338
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELL 334
DVFVG++L+D Y KC +E A F+++ ++ VSW ++I G A + +++ + ++L
Sbjct: 339 DVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQML 398
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYE-----YVLGSLMTSYAKSGLI 389
+ G P TF VL L H ++ G E+++ Y L M Y G +
Sbjct: 399 KEGICPTHGTFVGVL-------LACAHVGLVDKGVEHFKSMENTYRLAPEMKHY---GCV 448
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAH 448
D L R+G + + ++ PD+V W I+++AC
Sbjct: 449 VDLLC----------------------RSGYLDMAYNFIKKMPIVPDVVIWRILLSACKL 486
Query: 449 NGD 451
+G+
Sbjct: 487 HGN 489
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 214/470 (45%), Gaps = 23/470 (4%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
VF + R +L+ WN ++ K D + + + + + +F+ + + D
Sbjct: 28 VFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSD 87
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
+ G+ + +K GF+ V+N+L++MY + A+K+F + RDVVSWN+II
Sbjct: 88 VRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICG 147
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ F K L+L+ M V + T + I++ L +G + + ++ + D
Sbjct: 148 YYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVD 207
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
+++G+ L+D Y + ++ A F ++ KNIVSWNA+I+GYA + + L
Sbjct: 208 LYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLF----- 262
Query: 337 GYRPNEFTFSHVLRSS---LAFQLLQLHCLIIRMGYENY-------EYVLGSLMTSYAKS 386
NE V+ + + + L + H +++ E E + + +++ A
Sbjct: 263 ----NEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHL 318
Query: 387 GLISDALA---FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
G + A ++ +I V N + +Y + G + +++ + ++ D VSW +I
Sbjct: 319 GSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSII 378
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
+ A NG + L +F M I P + TFV +L AC+ + + G ++ T +
Sbjct: 379 SGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRL 438
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG 552
+ + ++D+ + G + + +M +V+ W L+SA L+G
Sbjct: 439 APEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHG 488
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 179/409 (43%), Gaps = 76/409 (18%)
Query: 281 SALVDFYA-KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGY 338
S ++ YA +L AH F++I ++ WN +I G + P +I + G
Sbjct: 9 SEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGI 68
Query: 339 RPNEFTFSHVLRSSLAF------QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
+ + TF + +S Q++++H + ++G+E+ +V +L+ Y G ++ A
Sbjct: 69 QGSHLTFIFLFKSCARVSDVRQGQMVRVHSM--KLGFESXSFVSNALIHMYVCFGELAMA 126
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+ LER D+VSWN +I +
Sbjct: 127 QKVFDGM-------------------------------LER-DVVSWNSIICGYYQFNRF 154
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
K+VL+LF+ M+A + D+ T + +SA L +G L I + ++ D ++ N
Sbjct: 155 KKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVV-VDLYLGNT 213
Query: 513 LIDMYG-------------------------------KCGSIGSSVKIFNEMTDRNVITW 541
LIDMYG K G++ ++ K+FNEM R+VI+W
Sbjct: 214 LIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISW 273
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
T++I L A++ F+EM KPD + + L+AC H G + G + + + R
Sbjct: 274 TSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYI-R 332
Query: 602 SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ ++ ++ + ++D+ + G +++A ++ M +++ W + + G
Sbjct: 333 KHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMK-TRDSVSWTSIISG 380
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 32/285 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVEGA 59
M +R+VVS+NSII Y + + L +F M T +S L+ E
Sbjct: 133 MLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMG 192
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ D ++G L+ +YGR G +D VF M K++V+WN+++ + K
Sbjct: 193 DYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKV 252
Query: 120 G--------FVE-----------------------DCMFLFCELVRSEVALTESSFVGVI 148
G F E + + LF E++ S V E + +
Sbjct: 253 GNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATAL 312
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
++ L+ GE +H + K+ ++ V NSL++MY +C + A ++F D++ RD V
Sbjct: 313 SACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSV 372
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
SW +II LA + AL ++ +M + + P TFV V+ +CA
Sbjct: 373 SWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACA 417
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 150/504 (29%), Positives = 248/504 (49%), Gaps = 43/504 (8%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L G Q+H ++K GF + ++ N+L++MY +C + A ++F + R+VVSW ++
Sbjct: 20 LRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVG 79
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ L L+ M PN+ T + +C G + G IH ++ E
Sbjct: 80 FLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGH 137
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
V ++LV Y+K A F I ++N+ +WN++I GYA L+ +Q
Sbjct: 138 DVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQR 197
Query: 337 GY--RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
+ +P+EFTF+ +L++ LG+ A+ G A
Sbjct: 198 RHDEQPDEFTFASLLKACSG---------------------LGA-----AREG------A 225
Query: 395 FVTALNIPRAVVPAN--IIAG----IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
V A R V PA+ I+AG +Y + + +++ LER + + W VI A
Sbjct: 226 QVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQ 285
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
G KE + LF+ ++ + D + S+++ + + G +H KT D
Sbjct: 286 EGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTP-AGLDVS 344
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V N L+DMY KCG G + + F EM RNV++WTA+I+ +G +G + A++ F EM+ G
Sbjct: 345 VANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEG 404
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
+ D VA +A+L+AC H GLV E F R+ + + P+ +HY C+VDLL R G L+EA
Sbjct: 405 VEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREA 464
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
+++I +MP P +W+T L C+
Sbjct: 465 KELILSMPMEPTVGVWQTLLSACR 488
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 224/501 (44%), Gaps = 48/501 (9%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G QL A+++K G F +D + L+ +Y + G L VF+ MP +++V+W +++ F
Sbjct: 23 GVQLHAALMKLG-FGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFL 81
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
HG +C+ LF E+ S + E + + G QIHG+ ++ GF+ +
Sbjct: 82 HHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDV 139
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS-VD 236
VANSLV MY + A ++F + R++ +WN++I A + +L ++ M
Sbjct: 140 VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRH 199
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE--CDVFVGSALVDFYAKCDNLE 294
P++ TF ++ +C+GL + G +HA + + + + AL+D Y KC L
Sbjct: 200 DEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLP 259
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F + +N + W +I+G+A + ++ L G R + S V+
Sbjct: 260 VAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFA 319
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
F L+ Q+HC T+ +GL V AN
Sbjct: 320 DFALVEQGKQVHCY-----------------TAKTPAGL---------------DVSVAN 347
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ +Y + G E + ++ ++VSW +I +G +E ++LF+ M+A +
Sbjct: 348 SLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEA 407
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSV 527
D +++LLSACS + I + + ++ + C ++D+ G+ G + +
Sbjct: 408 DEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYAC--MVDLLGRAGELREAK 465
Query: 528 KIFNEMT-DRNVITWTALISA 547
++ M + V W L+SA
Sbjct: 466 ELILSMPMEPTVGVWQTLLSA 486
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 188/454 (41%), Gaps = 39/454 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+RNVVS+ +++ + G + LR+F M G P +FT L G Q
Sbjct: 65 MPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQ 124
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ ++ G F V +L+ +Y + + VF+ +P ++L TWNS++S + G
Sbjct: 125 IHGVCVRTG-FEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 183
Query: 121 FVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD--YELL 177
D + +F E+ R + E +F ++ S G Q+H + G +
Sbjct: 184 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+A +L+++Y +C + A ++F +E R+ + W T+I A+ +A+ L+ R
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V + V+ A GK +H K DV V ++LVD Y KC A
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 363
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F E+ +N+VSW A+I G L E +Q
Sbjct: 364 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQA--------------------- 402
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAG 413
G E E +L+++ + SGL+ + + + + R + P +
Sbjct: 403 ---------EGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVD 453
Query: 414 IYNRTGQYNETVKL-LSQLERPDIVSWNIVIAAC 446
+ R G+ E +L LS P + W +++AC
Sbjct: 454 LLGRAGELREAKELILSMPMEPTVGVWQTLLSAC 487
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
LL A ++ +L G LH + K SDT + N LIDMY KCG + + ++F+ M
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGF-GSDTMLNNNLIDMYAKCGKLHMAGEVFDGM 65
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+RNV++WTAL+ +G A+ L F EM G P+ L A L AC GG R G+
Sbjct: 66 PERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKAC--GGGTRAGV 123
Query: 594 EL 595
++
Sbjct: 124 QI 125
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 149/521 (28%), Positives = 252/521 (48%), Gaps = 40/521 (7%)
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTT 244
M+ + + A +F ++ RD VSW ++ L + FG+A++ L M+ D P Q T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA-------- 296
V++SCA Q +G+ +H+ V+K L V V +++++ Y KC + E A
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 297 ---------------HL--------CFSEISNKNIVSWNALILGYASKSSPTSIFLLIE- 332
HL F + +++IVSWNA+I GY L
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 333 -LLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
L + P+EFT + VL + + Q+H I+R V +L+++YAKSG
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240
Query: 388 LISDALAFV-TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
+ +A + ++ V+ + Y + G ++ + D+V+W +I
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
NG E ++LF+ M P++YT ++LS C+ L L G +H ++ ++
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS-LLEQS 359
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN-VITWTALISALGLNGFAQRALEKFREME 565
+ V N +I MY + GS + ++F+++ R ITWT++I AL +G + A+ F EM
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 419
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G +PDR+ + VL+AC H G V EG ++++ + + PEM HY C+VDLL R G
Sbjct: 420 RAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLF 479
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYDTLNSTK 666
EA++ I MP P+A+ W + L C+ + A+ L + K
Sbjct: 480 SEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEK 520
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/576 (23%), Positives = 242/576 (42%), Gaps = 110/576 (19%)
Query: 84 LYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
++ + G L + VF +MP + V+W +V + G + + ++ T+ +
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA------------- 190
V+ + Q G ++H V+K G + VANS++NMY +C
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 191 ----GIWS--------------AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLR 232
W+ AE +F+ + R +VSWN +I ++ KAL+L+ R
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 233 M-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA------------------------- 266
M + P++ T V+++CA L N +GK +HA
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240
Query: 267 ------KVIKNALECDVFVGS--ALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
+++ ++E D+ V S AL++ Y K ++E A F ++N+++V+W A+I+GY
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300
Query: 319 ASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYE 373
+ +I L ++ G PN +T + VL + L Q+HC IR E
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL-E 432
V +++T YA R+G + ++ Q+
Sbjct: 361 SVSNAIITMYA--------------------------------RSGSFPWARRMFDQVCW 388
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
R + ++W +I A A +G +E + LF+ M A + PD T+V +LSACS + G
Sbjct: 389 RKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKR 448
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISALGLN 551
+ IK I+ + ++D+ + G + + M + + I W +L+SA ++
Sbjct: 449 YYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVH 508
Query: 552 GFAQRALEKFREMEFLGFKPDR----VALIAVLTAC 583
A+ L + + L P+ A+ V +AC
Sbjct: 509 KNAE--LAELAAEKLLSIDPNNSGAYSAIANVYSAC 542
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 115/494 (23%), Positives = 214/494 (43%), Gaps = 88/494 (17%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--G 58
MP+R+ VS+ ++ +R G +A++ L M GF PTQFT +LS ++ G
Sbjct: 18 MPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVG 77
Query: 59 AQLQASVLKNGL---------------FCADAFVGT---------------ALLGLYGRH 88
++ + V+K GL C D+ T A++ L
Sbjct: 78 RKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHL 137
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV-RSEVALTESSFVGV 147
G +D S+FE MP +S+V+WN++++ + ++G + LF ++ S +A E + V
Sbjct: 138 GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 197
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW-------------- 193
+ +N ++ G+Q+H +++ Y V N+L++ Y + +
Sbjct: 198 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDL 257
Query: 194 -------------------SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
SA +MF + RDVV+W +I ++ +A++L+ M
Sbjct: 258 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 317
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
PN T V++ CA L GK IH + I++ LE V +A++ YA+ +
Sbjct: 318 TCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFP 377
Query: 295 GAHLCFSEIS-NKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A F ++ K ++W ++I+ A ++ L E+L+ G P+ T+ VL +
Sbjct: 378 WARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSAC 437
Query: 353 LAFQLLQLHCLIIRMGYENY-----EYVLGSLMTSY-------AKSGLISDALAFVTALN 400
H + G Y E+ + M+ Y A++GL S+A F+ +
Sbjct: 438 -------SHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMP 490
Query: 401 I-PRAVVPANIIAG 413
+ P A+ ++++
Sbjct: 491 VEPDAIAWGSLLSA 504
>gi|15220808|ref|NP_173207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75175206|sp|Q9LNP2.1|PPR47_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g17630
gi|8778465|gb|AAF79473.1|AC022492_17 F1L3.33 [Arabidopsis thaliana]
gi|332191495|gb|AEE29616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 731
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 153/543 (28%), Positives = 270/543 (49%), Gaps = 54/543 (9%)
Query: 162 QIHGLVIKNGFDYEL-LVANSLVNMYFQCAGIWSAEKMFKDVEI---RDVVSWNTIIGAL 217
Q+H V+ + F + +A +L+++Y + + A +F+ V + D+ WN+I+ A
Sbjct: 74 QVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKAN 133
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
+ ALELY M + + ++ +C L L ++ H +VI+ L+ ++
Sbjct: 134 VSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENL 193
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG 337
V + L+ Y K + A+ F E+ +N +SWN +I G++ + S + E +Q
Sbjct: 194 HVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQRE 253
Query: 338 -YRPNEFTFSHVLRSSLA----------FQLLQL-------------------------- 360
++P+E T++ VL F L+++
Sbjct: 254 EFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIA 313
Query: 361 ---HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
H +I+ G+E Y +L+ Y K G + DA + + + N + +
Sbjct: 314 EKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIR-NKGIESWNSLITSFVD 372
Query: 418 TGQYNETVKLLSQLE--------RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
G+ +E + L S+LE + ++V+W VI C G + LE F+ M+ +++
Sbjct: 373 AGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLA 432
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
++ T +LS C++L L LG +HG + +T + S + V N L++MY KCG + +
Sbjct: 433 NSVTICCILSICAELPALNLGREIHGHVIRTSM-SENILVQNALVNMYAKCGLLSEGSLV 491
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F + D+++I+W ++I G++GFA++AL F M GF PD +AL+AVL+AC H GLV
Sbjct: 492 FEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLV 551
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
+G E+F M++ +G+EP+ +HY C+VDLL R G LKEA +I+ MP P + L
Sbjct: 552 EKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLN 611
Query: 650 GCQ 652
C+
Sbjct: 612 SCR 614
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 198/476 (41%), Gaps = 85/476 (17%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ-LQASVL 66
+NSI+ A G E+AL ++ M RG + +L +C L + V+
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
+ GL + V LL LY + G + + ++F +MP ++ ++WN ++ F + E +
Sbjct: 186 QIGL-KENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAV 244
Query: 127 FLFCELVRSEVALTESSFVGVI-----------------------HGLSNE--------- 154
+F + R E E ++ V+ + +S E
Sbjct: 245 KIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVC 304
Query: 155 ---QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
+ L E++HG VIK GF+ L N+L+++Y + + AE +F+ + + + SWN
Sbjct: 305 AELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWN 364
Query: 212 TIIGALAESENFGKAL---------------------------------------ELYLR 232
++I + ++ +AL E + +
Sbjct: 365 SLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQ 424
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
M V N T +++ CA L LG+ IH VI+ ++ ++ V +ALV+ YAKC
Sbjct: 425 MQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGL 484
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
L L F I +K+++SWN++I GY + ++ + ++ G+ P+ VL +
Sbjct: 485 LSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSA 544
Query: 352 SLAFQLLQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
L++ + + R G E + ++ + G + +A V N+P
Sbjct: 545 CSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVK--NMP 598
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 114/538 (21%), Positives = 222/538 (41%), Gaps = 78/538 (14%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP---RKSLVTWNSIVSIF 116
Q+ A VL + + L+ +Y R G L + +VFE + L WNSI+
Sbjct: 74 QVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKAN 133
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG--EQIHGLVIKNGFDY 174
HG E+ + L+ + + LT ++ + + FG H VI+ G
Sbjct: 134 VSHGLYENALELYRGM--RQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKE 191
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
L V N L+ +Y + + A +F ++ +R+ +SWN +I ++ + A++++ M
Sbjct: 192 NLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQ 251
Query: 235 VDIVFPNQTTFVYVINS-----------------------------------CAGLQNSI 259
+ P++ T+ V++ CA L+
Sbjct: 252 REEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALS 311
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
+ + +H VIK E + +AL+ Y K ++ A F +I NK I SWN+LI +
Sbjct: 312 IAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFV 371
Query: 320 SKSS-PTSIFLLIELLQLGY----RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEY 374
++ L EL ++ + + N T++ V++ C + G ++ EY
Sbjct: 372 DAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKG----------CNVQGRGDDSLEY 421
Query: 375 V----LGSLMTSYAKSGLISDALAFVTALNIPRA-------------VVPANIIAGIYNR 417
++ + I A + ALN+ R ++ N + +Y +
Sbjct: 422 FRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAK 481
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G +E + + D++SWN +I +G ++ L +F M ++ +PD V++
Sbjct: 482 CGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAV 541
Query: 478 LSACSKLCNLALGSSL-HGLIKKTEI-ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
LSACS + G + + + K+ + + + C ++D+ G+ G + + +I M
Sbjct: 542 LSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYAC--IVDLLGRVGFLKEASEIVKNM 597
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 162/364 (44%), Gaps = 31/364 (8%)
Query: 262 KSIHAKVIKNALECDVF----VGSALVDFYAKCDNLEGAHLCFSEISN---KNIVSWNAL 314
+ +HA+V+ + +F + + L+ YA+ L A F +S ++ WN++
Sbjct: 73 RQVHAQVLLSDF---IFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSI 129
Query: 315 ILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGY 369
+ S ++ L + Q G + + +LR+ L H +I++G
Sbjct: 130 LKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGL 189
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
+ +V+ L+T Y K+G + DA + + R + N++ +++ VK+
Sbjct: 190 KENLHVVNELLTLYPKAGRMGDAYNLFVEMPV-RNRMSWNVMIKGFSQEYDCESAVKIFE 248
Query: 430 QLER----PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
++R PD V+W V++ + G +++VL+ F MR + S C++L
Sbjct: 249 WMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELE 308
Query: 486 NLALGSSLHGLIKK---TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
L++ +HG + K E + S N LI +YGK G + + +F ++ ++ + +W
Sbjct: 309 ALSIAEKVHGYVIKGGFEEYLPSR----NALIHVYGKQGKVKDAEHLFRQIRNKGIESWN 364
Query: 543 ALISALGLNGFAQRALEKFREMEFLGF----KPDRVALIAVLTACRHGGLVREGMELFER 598
+LI++ G AL F E+E + K + V +V+ C G + +E F +
Sbjct: 365 SLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQ 424
Query: 599 MNRS 602
M S
Sbjct: 425 MQFS 428
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
D++++S+NSII Y G+ E AL MF MI+ GF P +LS C VE G +
Sbjct: 497 DKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGRE 556
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV 107
+ S+ K ++ L GR G L E + ++MP + V
Sbjct: 557 IFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKV 603
>gi|115473985|ref|NP_001060591.1| Os07g0670000 [Oryza sativa Japonica Group]
gi|22831115|dbj|BAC15976.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
gi|50510078|dbj|BAD30730.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
gi|113612127|dbj|BAF22505.1| Os07g0670000 [Oryza sativa Japonica Group]
gi|125559550|gb|EAZ05086.1| hypothetical protein OsI_27276 [Oryza sativa Indica Group]
Length = 726
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 179/610 (29%), Positives = 283/610 (46%), Gaps = 55/610 (9%)
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
+P L A + GL A V +L Y + G V VF + + ++N+I+
Sbjct: 47 DPASLPALHAVAVTTGLH-GFAAVTNSLAARYAKTGSFPSAVGVFAAARARDVSSYNTIL 105
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF-GEQIHGLVIKNGF 172
S F + + ++RS ++ V L+ + F Q+H L ++G
Sbjct: 106 SAFPDPA---EALDFASWMLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSGL 162
Query: 173 DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN-FGKALELYL 231
++ V N+LV Y + + A +F D+ RD+VSWN +I LA+ + + + ++L
Sbjct: 163 AADVFVGNALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFL 222
Query: 232 RMSVD-IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
RM D V P++ + VI +C G LG+ +H +K +E V +G+ LV Y KC
Sbjct: 223 RMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKC 282
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLR 350
A F +S +++VSW I S ++ L + + G PNE TF ++
Sbjct: 283 GAPGSARRLFDAMSERDVVSWTTAI----SMDGEDALTLFNGMRRDGVPPNEVTFVALMS 338
Query: 351 S------SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
+ + Q++ CL + SL+T YAK+ + DA
Sbjct: 339 ALPADCPARGAQMVHAACL--KAAVSGEAAASNSLITMYAKARRMDDAR----------- 385
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+ + R +I++WN VI+ A NG + LELF M A
Sbjct: 386 ---------------------MVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSM-A 423
Query: 465 ARIYPDNYTFVSLLSACSKL--CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ P+ TF S+LSA + + ++A G H S+ +V LIDMY K G+
Sbjct: 424 RCLTPNETTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSE-YVAGALIDMYAKRGN 482
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ S K F+E R++I WTA+ISA +G + F +M G PD V L+AVLTA
Sbjct: 483 LEESRKAFHETEQRSLIAWTAIISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTA 542
Query: 583 CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
CR+GG+V G ++F+ M GVE +HY CVVD+L R G L EAE+++ MP P+
Sbjct: 543 CRYGGMVDAGRDIFDSMAADRGVELWPEHYSCVVDMLGRAGRLAEAEELMMRMPAGPSVS 602
Query: 643 IWRTFLEGCQ 652
++ L C+
Sbjct: 603 ALQSLLGACR 612
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 177/616 (28%), Positives = 271/616 (43%), Gaps = 104/616 (16%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRG-FEPTQFTFGGLLSCDSLNPVEG---A 59
R+V S+N+I+SA+ +AL +M+ G P T LS + EG
Sbjct: 96 RDVSSYNTILSAFPDPA---EALDFASWMLRSGAVRPDAVTCTVALSL-AAGRGEGFLVR 151
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
QL A ++GL AD FVG AL+ Y R G L E SVF+DMP + LV+WN+++ +
Sbjct: 152 QLHALAWRSGL-AADVFVGNALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQD 210
Query: 120 GFVEDC----MFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
G DC + +F ++R +V S VI E LE G Q+HG +K G +
Sbjct: 211 G---DCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEG 267
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ + N LV MY++C SA ++F + RDVVSW T I E AL L+ M
Sbjct: 268 YVSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAISMDGE-----DALTLFNGMR 322
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
D V PN+ TFV ++++ + + +HA +K A+ + ++L+ YAK ++
Sbjct: 323 RDGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMD 382
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A + F + + I++WNA+I GYA L + PNE TF+ VL + A
Sbjct: 383 DARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSMARCLTPNETTFASVLSAVTA 442
Query: 355 FQLLQL------HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ + + H + MG+ + EYV G+L+ YAK
Sbjct: 443 VETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAK----------------------- 479
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
G E+ K + E+ +++W +I+A A +G Y V+ LF M + +
Sbjct: 480 ---------RGNLEESRKAFHETEQRSLIAWTAIISANARHGSYGAVMSLFGDMARSGVA 530
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD +++L+AC YG G + +
Sbjct: 531 PDGVVLLAVLTACR----------------------------------YG--GMVDAGRD 554
Query: 529 IFNEM-TDRNVITWTALIS-ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-H 585
IF+ M DR V W S + + G A R E M + P AL ++L ACR H
Sbjct: 555 IFDSMAADRGVELWPEHYSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLLGACRIH 614
Query: 586 GGLVREGMELFERMNR 601
G E+ ER+ R
Sbjct: 615 G-----DAEIGERIAR 625
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 44/285 (15%)
Query: 339 RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTA 398
R N FS +R+S L LH + + G + V SL YAK
Sbjct: 33 RVNPIAFSAAVRASDPASLPALHAVAVTTGLHGFAAVTNSLAARYAK------------- 79
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
TG + V + + D+ S+N +++A D E L+
Sbjct: 80 -------------------TGSFPSAVGVFAAARARDVSSYNTILSAFP---DPAEALDF 117
Query: 459 FKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
+M R+ + PD T LS + L LH L ++ +++D FV N L+ Y
Sbjct: 118 ASWMLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSG-LAADVFVGNALVTAY 176
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG-FAQRALEKFREMEFLG-FKPDRVA 575
+ GS+G + +F++M R++++W ALI L +G + F M G +PDR++
Sbjct: 177 SRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRIS 236
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
+ +V+ AC GG EG R + V+ ++ Y + ++LV
Sbjct: 237 VCSVIPAC--GG---EGKLELGRQVHGFAVKLGVEGYVSIGNVLV 276
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 139/315 (44%), Gaps = 46/315 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC----DSLNPV 56
MP R ++++N++IS Y++ G DAL +F M R P + TF +LS ++++
Sbjct: 391 MPRREIIAWNAVISGYAQNGRCNDALELFSSMA-RCLTPNETTFASVLSAVTAVETVSMA 449
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G + L G F +V AL+ +Y + G L+E F + ++SL+ W +I+S
Sbjct: 450 YGQMYHSRALSMG-FGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISAN 508
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD-YE 175
+HG M LF ++ RS VA + V+ +G ++ G D ++
Sbjct: 509 ARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACR-----------YGGMVDAGRDIFD 557
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ A+ V ++ + ++ ++ L + +A EL +RM
Sbjct: 558 SMAADRGVELWPE--------------------HYSCVVDMLGRAGRLAEAEELMMRMPA 597
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI--KNALECDVFVGSALVDFYAKCDNL 293
P+ + ++ +C ++ +G+ I A+++ K E +V L + YA +
Sbjct: 598 G---PSVSALQSLLGACRIHGDAEIGERI-ARILTEKEPTESGAYV--LLSNIYADVGDW 651
Query: 294 EGAHLCFSEISNKNI 308
+G ++ ++ +
Sbjct: 652 DGVAKVRRKMRDRGV 666
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 152/508 (29%), Positives = 243/508 (47%), Gaps = 27/508 (5%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCA----GIWSAEKMFKDVEIRDVVSWNTIIGA 216
+QIH IK G + L ++ F CA + A ++F + + WNT+I
Sbjct: 24 KQIHSHTIKMGLSSDPLFQKRVIA--FCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKG 81
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ + + +YL M + P++ TF +++ GK + +K+ + +
Sbjct: 82 YSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSN 141
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQ 335
+FV A + ++ C ++ A F +V+WN ++ GY K S L IE+ +
Sbjct: 142 LFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEK 201
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS-----------LMTSYA 384
G PN T +L + + L+ G Y+Y+ G L+ +A
Sbjct: 202 RGVSPNSVTLVLMLSACSKLKDLE-------GGKHIYKYINGGIVERNLILENVLIDMFA 254
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
G + +A + + + +I+ G N GQ + K Q+ D VSW +I
Sbjct: 255 ACGEMDEAQSVFDNMKNRDVISWTSIVTGFAN-IGQIDLARKYFDQIPERDYVSWTAMID 313
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
+ E L LF+ M+ + + PD +T VS+L+AC+ L L LG + I K I
Sbjct: 314 GYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSI-K 372
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
+DTFV N LIDMY KCG++G + K+F EM ++ TWTA+I L +NG + AL F M
Sbjct: 373 NDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNM 432
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
PD + I VL AC H G+V +G F M +G++P + HY C+VDLL R G
Sbjct: 433 IEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGR 492
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L+EA ++I MP PN+++W + L C+
Sbjct: 493 LEEAHEVIVNMPVKPNSIVWGSLLGACR 520
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/583 (21%), Positives = 262/583 (44%), Gaps = 40/583 (6%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRH--GCLDEVVSVFEDMPRK 104
L C S+ ++ Q+ + +K GL +D ++ H G + VF+ +P+
Sbjct: 14 LEKCKSMYQLK--QIHSHTIKMGL-SSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQP 70
Query: 105 SLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIH 164
+L WN+++ + + ++ + ++ ++ S + +F ++ G + L++G+ +
Sbjct: 71 TLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLL 130
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
+K+GFD L V + ++M+ C + A K+F + +VV+WN ++ + F
Sbjct: 131 NHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFK 190
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALV 284
K+ L++ M V PN T V ++++C+ L++ GK I+ + +E ++ + + L+
Sbjct: 191 KSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLI 250
Query: 285 DFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-----------KSSPTSIFLLIEL 333
D +A C ++ A F + N++++SW +++ G+A+ P ++
Sbjct: 251 DMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTA 310
Query: 334 LQLGY-RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
+ GY R N F + L F+ +Q+ + E+ + S++T+ A G +
Sbjct: 311 MIDGYLRMNRFIEALAL-----FREMQMS------NVKPDEFTMVSILTACAHLGALELG 359
Query: 393 ---LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
++ +I N + +Y + G + K+ ++ D +W +I A N
Sbjct: 360 EWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAIN 419
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
G +E L +F M A I PD T++ +L AC+ + G S + I +
Sbjct: 420 GHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTH 479
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLG 568
++D+ G+ G + + ++ M + N I W +L+ A ++ Q L + + L
Sbjct: 480 YGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQ--LAEMAAKQILE 537
Query: 569 FKPDRVALIAVL----TACRHGGLVREGMELFERMNRSYGVEP 607
+P+ A+ +L AC+ +R+ +L M R P
Sbjct: 538 LEPENGAVYVLLCNIYAACKRWENLRQVRKLM--MERGIKKTP 578
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 120/537 (22%), Positives = 234/537 (43%), Gaps = 91/537 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
+P + +N++I YSR + ++ + M+L M+ +P +FTF LL + N G
Sbjct: 67 IPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYG 126
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L +K+G F ++ FV A + ++ +D VF+ +VTWN ++S + +
Sbjct: 127 KVLLNHAVKHG-FDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNR 185
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ LF E+ + V+ + V ++ S +DLE G+ I+ + + L++
Sbjct: 186 VKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLIL 245
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA-------------------- 218
N L++M+ C + A+ +F +++ RDV+SW +I+ A
Sbjct: 246 ENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDY 305
Query: 219 -----------ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
F +AL L+ M + V P++ T V ++ +CA L LG+ +
Sbjct: 306 VSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTY 365
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTS 326
+ KN+++ D FVG+AL+D Y KC N+ A F E+ +K+ +W A+I+G A + +
Sbjct: 366 IDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEA 425
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
+ + +++ P+E T+ VL + +
Sbjct: 426 LAMFSNMIEASITPDEITYIGVL-------------------------------CACTHA 454
Query: 387 GLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNI 441
G++ +F ++ + + P + + R G+ E +++ + +P+ + W
Sbjct: 455 GMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGS 514
Query: 442 VIAACAHNGDY-------KEVLELFKYMRAARIYPDNYTFVSLL----SACSKLCNL 487
++ AC + + K++LEL P+N LL +AC + NL
Sbjct: 515 LLGACRVHKNVQLAEMAAKQILEL---------EPENGAVYVLLCNIYAACKRWENL 562
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 150/504 (29%), Positives = 248/504 (49%), Gaps = 43/504 (8%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L G Q+H ++K GF + ++ N+L++MY +C + A ++F + R+VVSW ++
Sbjct: 216 LRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVG 275
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ L L+ M PN+ T + +C G + G IH ++ E
Sbjct: 276 FLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGH 333
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
V ++LV Y+K A F I ++N+ +WN++I GYA L+ +Q
Sbjct: 334 DVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQR 393
Query: 337 GY--RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
+ +P+EFTF+ +L++ LG+ A+ G A
Sbjct: 394 RHDEQPDEFTFASLLKACSG---------------------LGA-----AREG------A 421
Query: 395 FVTALNIPRAVVPAN--IIAG----IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
V A R V PA+ I+AG +Y + + +++ LER + + W VI A
Sbjct: 422 QVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQ 481
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
G KE + LF+ ++ + D + S+++ + + G +H KT D
Sbjct: 482 EGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTP-AGLDVS 540
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V N L+DMY KCG G + + F EM RNV++WTA+I+ +G +G + A++ F EM+ G
Sbjct: 541 VANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEG 600
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
+ D VA +A+L+AC H GLV E F R+ + + P+ +HY C+VDLL R G L+EA
Sbjct: 601 VEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREA 660
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
+++I +MP P +W+T L C+
Sbjct: 661 KELILSMPMEPTVGVWQTLLSACR 684
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 224/501 (44%), Gaps = 48/501 (9%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G QL A+++K G F +D + L+ +Y + G L VF+ MP +++V+W +++ F
Sbjct: 219 GVQLHAALMKLG-FGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFL 277
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
HG +C+ LF E+ S + E + + G QIHG+ ++ GF+ +
Sbjct: 278 HHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDV 335
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS-VD 236
VANSLV MY + A ++F + R++ +WN++I A + +L ++ M
Sbjct: 336 VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRH 395
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE--CDVFVGSALVDFYAKCDNLE 294
P++ TF ++ +C+GL + G +HA + + + + AL+D Y KC L
Sbjct: 396 DEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLP 455
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F + +N + W +I+G+A + ++ L G R + S V+
Sbjct: 456 VAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFA 515
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
F L+ Q+HC T+ +GL V AN
Sbjct: 516 DFALVEQGKQVHCY-----------------TAKTPAGL---------------DVSVAN 543
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ +Y + G E + ++ ++VSW +I +G +E ++LF+ M+A +
Sbjct: 544 SLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEA 603
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSV 527
D +++LLSACS + I + + ++ + C ++D+ G+ G + +
Sbjct: 604 DEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYAC--MVDLLGRAGELREAK 661
Query: 528 KIFNEMT-DRNVITWTALISA 547
++ M + V W L+SA
Sbjct: 662 ELILSMPMEPTVGVWQTLLSA 682
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 190/459 (41%), Gaps = 39/459 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+RNVVS+ +++ + G + LR+F M G P +FT L G Q
Sbjct: 261 MPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQ 320
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ ++ G F V +L+ +Y + + VF+ +P ++L TWNS++S + G
Sbjct: 321 IHGVCVRTG-FEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 379
Query: 121 FVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD--YELL 177
D + +F E+ R + E +F ++ S G Q+H + G +
Sbjct: 380 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 439
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+A +L+++Y +C + A ++F +E R+ + W T+I A+ +A+ L+ R
Sbjct: 440 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 499
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V + V+ A GK +H K DV V ++LVD Y KC A
Sbjct: 500 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 559
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F E+ +N+VSW A+I G L E +Q
Sbjct: 560 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQA--------------------- 598
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAG 413
G E E +L+++ + SGL+ + + + + R + P +
Sbjct: 599 ---------EGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVD 649
Query: 414 IYNRTGQYNETVKL-LSQLERPDIVSWNIVIAACAHNGD 451
+ R G+ E +L LS P + W +++AC + D
Sbjct: 650 LLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKD 688
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
LL A ++ +L G LH + K SDT + N LIDMY KCG + + ++F+ M
Sbjct: 203 IADLLRASARGSSLRGGVQLHAALMKLGF-GSDTMLNNNLIDMYAKCGKLHMAGEVFDGM 261
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+RNV++WTAL+ +G A+ L F EM G P+ L A L AC GG R G+
Sbjct: 262 PERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKAC--GGGTRAGV 319
Query: 594 EL 595
++
Sbjct: 320 QI 321
>gi|225468012|ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 602
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/442 (31%), Positives = 229/442 (51%), Gaps = 40/442 (9%)
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
A+ N +ALE + RM+ P + +NSCA L N LG IHA++I+ E ++
Sbjct: 77 AKHANVREALESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNL 136
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQL 336
F+ SALVD YAKCD + A F + + VSW ++I G++ +I E+L
Sbjct: 137 FLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGS 196
Query: 337 GYRPNEFTFSHVLRSSLAF-----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
+PN T+ V+ + Q LH ++++G+ +V+ L+ Y+K G I
Sbjct: 197 QIKPNCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQ 256
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
A+ + +ER +I+ +N +I+ + N
Sbjct: 257 AVLLFG-------------------------------TTIERDNIL-FNSMISGYSQNLF 284
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+E L+LF MR + P ++T S+L+AC L L G +H L+ K S+ FV +
Sbjct: 285 GEEALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGS-ESNVFVVS 343
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF-REMEFLGFK 570
L+DMY KCGSI + +F++ ++N + WT++I+ +G L F R + GF
Sbjct: 344 ALLDMYSKCGSIDEARCVFDQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVTEEGFT 403
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
PD + AVLTAC H G + +G++ F +M R YG+ P++D Y C+VDL VR GHL++A++
Sbjct: 404 PDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKE 463
Query: 631 IITTMPFPPNALIWRTFLEGCQ 652
++ +P PN+++W +FL C+
Sbjct: 464 LMEAIPCEPNSVMWGSFLSSCK 485
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 217/455 (47%), Gaps = 14/455 (3%)
Query: 22 VEDALRMFLYMINRGFEPTQFTF-GGLLSCDSL-NPVEGAQLQASVLKNGLFCADAFVGT 79
V +AL F M G +PT+F L SC L N G Q+ A +++ G F + F+ +
Sbjct: 82 VREALESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTG-FEDNLFLNS 140
Query: 80 ALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVAL 139
AL+ LY + + + VF+ M + V+W SI+S F K+G ++ + F E++ S++
Sbjct: 141 ALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKP 200
Query: 140 TESSFVGVIHGLSN-EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
++V VI + E + +H V+K GF + V + L++ Y +C I A +
Sbjct: 201 NCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLL 260
Query: 199 FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
F RD + +N++I +++ +AL+L++ M + + P T ++N+C L
Sbjct: 261 FGTTIERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACGSLTIL 320
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
G+ +H+ V K E +VFV SAL+D Y+KC +++ A F + KN V W ++I GY
Sbjct: 321 QQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWTSMITGY 380
Query: 319 A-SKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV- 375
A S P + L L+ + G+ P+ F+ VL + L +Y V
Sbjct: 381 AQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVP 440
Query: 376 ----LGSLMTSYAKSGLISDALAFVTALNI-PRAVVPANIIAG--IYNRTGQYNETVKLL 428
L+ Y ++G + A + A+ P +V+ + ++ +Y E L
Sbjct: 441 DLDQYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAADKL 500
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
++E + + + A G + EV+E+ K M+
Sbjct: 501 FKMEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMK 535
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 230/501 (45%), Gaps = 57/501 (11%)
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
KH V + + F + S T+ ++ + + G QIH +I+ GF+ L
Sbjct: 77 AKHANVREALESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNL 136
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ ++LV++Y +C I A+++F +E D VSW +II +++ +A+ + M
Sbjct: 137 FLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGS 196
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKS--IHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ PN T+V VI++C GL+ +I + +HA V+K FV S L+D Y+KC ++
Sbjct: 197 QIKPNCVTYVSVISACTGLE-TIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRID 255
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A L F ++ + +N++I GY+ ++ L +E+ G P + T + +L +
Sbjct: 256 QAVLLFGTTIERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACG 315
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ +L Q+H L+ +MG E+ +V+ +L+ Y+K G I +A V+ +
Sbjct: 316 SLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWTS 375
Query: 410 IIAGIYNRTGQYNETVKLLSQLE-----RPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+I G Y ++G+ E + L +L PD + + V+ AC H G + ++ F MR
Sbjct: 376 MITG-YAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRR 434
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+Y V L D + C L+D+Y + G +
Sbjct: 435 ------DYGLVPDL---------------------------DQYAC--LVDLYVRNGHLR 459
Query: 525 SSVKIFNEMT-DRNVITWTALISALGLNGFAQ---RALEKFREMEFLGFKPDRVALIAVL 580
+ ++ + + N + W + +S+ L G A+ A +K +ME P +A+
Sbjct: 460 KAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAP----YVAMA 515
Query: 581 TACRHGGLVREGMELFERMNR 601
+ GL E +E+ + M +
Sbjct: 516 SIYAQAGLWSEVVEIRKLMKQ 536
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQ 60
+R+ + FNS+IS YS+ + E+AL++F+ M N G PT T +L +C SL + +G Q
Sbjct: 266 ERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGRQ 325
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ + V K G ++ FV +ALL +Y + G +DE VF+ K+ V W S+++ + + G
Sbjct: 326 VHSLVAKMGSE-SNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWTSMITGYAQSG 384
Query: 121 FVEDCMFLFCELVRSE 136
+ + LF LV E
Sbjct: 385 RGPEGLGLFERLVTEE 400
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 168/583 (28%), Positives = 276/583 (47%), Gaps = 75/583 (12%)
Query: 141 ESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC----------- 189
E + V + S+ L G+QIH LV K+G + V NSL++ Y +C
Sbjct: 52 ELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFD 111
Query: 190 --------------------AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
+ +A +F+ + I+ VS+ T++ LA++ + +A+ +
Sbjct: 112 TCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGV 171
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
+ M V PN+ T VI++ + + + + +HA K LE V + LV Y
Sbjct: 172 FKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCV 231
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSI---------------------- 327
C +L A + F EI +N+V+WN ++ GY SKS +
Sbjct: 232 CSSLGNARVLFDEIPERNVVTWNVMLNGY-SKSGLVDLARDLFERIPAKDVVSWGTIIDG 290
Query: 328 FLLIE-----------LLQLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENY 372
++ IE +L+ G PNE ++ R+ + Q H +I+R G++ Y
Sbjct: 291 YVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCY 350
Query: 373 EYVLGSLMTSYAKSGLISDALAFVT-ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
+++ +++ YA G I+ LAF+ L V N + + R G + +L ++
Sbjct: 351 DFIQATIIHFYAACGEIN--LAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEM 408
Query: 432 ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGS 491
D+ SW+ +I+ + N L+LF M A + P+ T VS+ SA + L L G
Sbjct: 409 PERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGR 468
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR--NVITWTALISALG 549
H I I +D LIDMY KCGSI ++++F E+ DR +V W A+I L
Sbjct: 469 WAHEYILSNSIPLNDNLNA-ALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLA 527
Query: 550 LNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEM 609
++G A +L+ F +++ + KP+ + I VL+AC H GLV G + F+ M Y +EP +
Sbjct: 528 MHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNI 587
Query: 610 DHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
HY C++DLL R G LKEA ++I MP + +IW T L C+
Sbjct: 588 KHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACR 630
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 150/655 (22%), Positives = 271/655 (41%), Gaps = 106/655 (16%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQAS 64
N+ NS+IS Y +C + +A +F +C L+PV
Sbjct: 86 NIFVKNSLISFYVKCRLISNARSLFD------------------TCSVLDPVS------- 120
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
C +L Y + G LD +FE MP K V++ ++V ++ +
Sbjct: 121 -------C------NIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLE 167
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ +F ++ + V E + VI S+ + +H L K G + +VA +LV+
Sbjct: 168 AIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVH 227
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWN-------------------------------TI 213
MY C+ + +A +F ++ R+VV+WN TI
Sbjct: 228 MYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTI 287
Query: 214 IGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL 273
I + E G+AL +Y M V PN+ V +I++C G+ H +++
Sbjct: 288 IDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGF 347
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA------------SK 321
+C F+ + ++ FYA C + A L F S ++ SWNALI G+ +
Sbjct: 348 DCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDE 407
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMT 381
+F ++ GY NE + LA QL ++ G + E + S+ +
Sbjct: 408 MPERDVFSWSSMIS-GYSQNE-------QPDLALQLFH---EMVAGGVQPNEITMVSVFS 456
Query: 382 SYAKSGLISD---ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER--PDI 436
+ A G + + A ++ + +IP + +Y + G ++L +++ +
Sbjct: 457 AIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSV 516
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
WN +I A +G L+LF ++ RI P++ TF+ +LSAC + G
Sbjct: 517 SPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKG 576
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNG--- 552
+K I + +ID+ G+ G + + ++ +M + +V+ W L++A +G
Sbjct: 577 MKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVE 636
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLT-ACR--HGGLVREGMELFERMNRSYG 604
+RA E +++ + RV L + A R LVR M+ +RM +S G
Sbjct: 637 IGERAAENLAKLD-ISHGAGRVLLSNIYADAGRWDDAFLVRRAMQ-SQRMKKSPG 689
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 160/354 (45%), Gaps = 42/354 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
+P ++VVS+ +II Y + + +ALRM+ M+ G P + L+S ++ EG
Sbjct: 276 IPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEG 335
Query: 59 AQLQASVLKNGLFCADAFVGT------------------------------ALLGLYGRH 88
Q +++ G C D T AL+ + R+
Sbjct: 336 QQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRN 395
Query: 89 GCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI 148
G +++ +F++MP + + +W+S++S + ++ + + LF E+V V E + V V
Sbjct: 396 GMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVF 455
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR--D 206
++ L G H ++ N + +L++MY +C I A ++F +++ R
Sbjct: 456 SAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSS 515
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC--AGLQNSILGKSI 264
V WN II LA + +L+L+ ++ + PN TF+ V+++C AGL ++
Sbjct: 516 VSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDT---GEK 572
Query: 265 HAKVIKN--ALECDVFVGSALVDFYAKCDNL-EGAHLCFSEISNKNIVSWNALI 315
+ K +KN +E ++ ++D + L E A + ++V W L+
Sbjct: 573 YFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLL 626
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 115/226 (50%), Gaps = 15/226 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFT----FGGLLSCDSLNPV 56
MP+R+V S++S+IS YS+ + AL++F M+ G +P + T F + + +L +
Sbjct: 408 MPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTL--M 465
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK--SLVTWNSIVS 114
EG +L N + D + AL+ +Y + G + + +F ++ + S+ WN+I+
Sbjct: 466 EGRWAHEYILSNSIPLNDN-LNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIIC 524
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ-IHGLVIKNGFD 173
HG + LF +L R + +F+GV+ + ++ GE+ G+ KN ++
Sbjct: 525 GLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGM--KNLYN 582
Query: 174 YELLVAN--SLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
E + + ++++ + + A +M + + ++ DVV W T++ A
Sbjct: 583 IEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAA 628
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 173/617 (28%), Positives = 296/617 (47%), Gaps = 48/617 (7%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
QL + LK GL D+FV T L LY R+ L +FE+ P K++ WN+++ +
Sbjct: 22 QLHSQCLKVGL-ALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLE 80
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGV---IHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G + + LF ++ V V + S Q LE G+ IHG +K D ++
Sbjct: 81 GKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGF-LKKKIDSDM 139
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV- 235
V ++L+ +Y +C + A K+F + DVV W +II ++ + AL + RM V
Sbjct: 140 FVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVL 199
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ V P+ T V ++CA L + LG+S+H V + + + + +++++ Y K ++
Sbjct: 200 EQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRI 259
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLA 354
A F E+ K+I+SW++++ YA + T+ L E++ N T LR+ +
Sbjct: 260 AANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACAS 319
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
L Q+H L + G+E V +LM Y K P N
Sbjct: 320 SSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLK------------------CFSPENA 361
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
I +L +++ + D+VSW ++ + A G + L +F M + PD
Sbjct: 362 I--------------ELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPD 407
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
V +L+A S+L + LH + K+ ++ F+ LI++Y KC SI ++ K+F
Sbjct: 408 AIALVKILAASSELGIVQQALCLHAFVTKSG-FDNNEFIGASLIELYAKCSSIDNANKVF 466
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREME-FLGFKPDRVALIAVLTACRHGGLV 589
+ +V+TW+++I+A G +G + AL+ +M KP+ V +++L+AC H GL+
Sbjct: 467 KGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLI 526
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG+++F M Y + P ++HY +VDLL R G L +A +I MP +W L
Sbjct: 527 EEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLG 586
Query: 650 GC---QRCRIAKYDTLN 663
C Q +I + LN
Sbjct: 587 ACRIHQNIKIGELAALN 603
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/559 (26%), Positives = 267/559 (47%), Gaps = 47/559 (8%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGF---EPTQFTFG-GLLSCDSLNPVE 57
P + V +N+++ +Y G + L +F M P +T L SC L +E
Sbjct: 63 PCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLE 122
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
++ LK + +D FVG+AL+ LY + G +++ V VF + P+ +V W SI++ +
Sbjct: 123 LGKMIHGFLKKKID-SDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYE 181
Query: 118 KHGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G E + F +V +V+ + V + D G +HG V + GFD +L
Sbjct: 182 QNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKL 241
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ANS++N+Y + I A +F+++ +D++SW++++ A++ AL L+ M
Sbjct: 242 CLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDK 301
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ N+ T + + +CA N GK IH + E D+ V +AL+D Y KC + E A
Sbjct: 302 RIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENA 361
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F+ + K++VSW L GYA + S+ + +L G RP+ +L +S
Sbjct: 362 IELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSEL 421
Query: 356 QLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
++Q LH + + G++N E++ SL+ YAK I +A
Sbjct: 422 GIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNA------------------- 462
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPD 470
K+ L D+V+W+ +IAA +G +E L+L M + + P+
Sbjct: 463 -------------NKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPN 509
Query: 471 NYTFVSLLSACSKLCNLALGSSL-HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
+ TFVS+LSACS + G + H ++ + +++ + +++D+ G+ G + ++ +
Sbjct: 510 DVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHY-GIMVDLLGRMGELDKALDM 568
Query: 530 FNEMT-DRNVITWTALISA 547
N M W AL+ A
Sbjct: 569 INNMPMQAGPHVWGALLGA 587
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 96/180 (53%), Gaps = 7/180 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVEGA 59
MP ++VVS+ + S Y+ G +L +F M++ G P +L+ S L V+ A
Sbjct: 368 MPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQA 427
Query: 60 Q-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L A V K+G F + F+G +L+ LY + +D VF+ + +VTW+SI++ +G
Sbjct: 428 LCLHAFVTKSG-FDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGF 486
Query: 119 HGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
HG E+ + L ++ S+V + +FV ++ S+ +E G ++ +++ +Y+L+
Sbjct: 487 HGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVN---EYQLM 543
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 150/504 (29%), Positives = 248/504 (49%), Gaps = 43/504 (8%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L G Q+H ++K GF + ++ N+L++MY +C + A ++F + R+VVSW ++
Sbjct: 20 LRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVG 79
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ L L+ M PN+ T + +C G + G IH ++ E
Sbjct: 80 FLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGH 137
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
V ++LV Y+K A F I ++N+ +WN++I GYA L+ +Q
Sbjct: 138 DVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQR 197
Query: 337 GY--RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
+ +P+EFTF+ +L++ LG+ A+ G A
Sbjct: 198 RHDEQPDEFTFASLLKACSG---------------------LGA-----AREG------A 225
Query: 395 FVTALNIPRAVVPAN--IIAG----IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAH 448
V A R V PA+ I+AG +Y + + +++ LER + + W VI A
Sbjct: 226 QVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQ 285
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
G KE + LF+ ++ + D + S+++ + + G +H KT D
Sbjct: 286 EGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTP-AGLDVS 344
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V N L+DMY KCG G + + F EM RNV++WTA+I+ +G +G + A++ F EM+ G
Sbjct: 345 VANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEG 404
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
+ D VA +A+L+AC H GLV E F R+ + + P+ +HY C+VDLL R G L+EA
Sbjct: 405 VEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREA 464
Query: 629 EKIITTMPFPPNALIWRTFLEGCQ 652
+++I +MP P +W+T L C+
Sbjct: 465 KELILSMPMEPTVGVWQTLLSACR 488
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/501 (23%), Positives = 223/501 (44%), Gaps = 48/501 (9%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G QL A+++K G F +D + L+ +Y + G L VF+ MP +++V+W +++ F
Sbjct: 23 GVQLHAALMKLG-FGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFL 81
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
HG +C+ LF E+ S + E + + G QIHG+ ++ GF+ +
Sbjct: 82 HHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDV 139
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS-VD 236
VANSLV MY + A ++F + R++ +WN++I A + +L ++ M
Sbjct: 140 VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRH 199
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE--CDVFVGSALVDFYAKCDNLE 294
P++ TF ++ +C+GL + G +HA + + + + AL+D Y KC L
Sbjct: 200 DEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLP 259
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F + +N + W +I+G+A + ++ L G R + S V+
Sbjct: 260 VAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFA 319
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
F L+ Q+HC T+ +GL V AN
Sbjct: 320 DFALVEQGKQVHCY-----------------TAKTPAGL---------------DVSVAN 347
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+ +Y + G E + ++ ++VSW +I +G +E ++LF+ M+ +
Sbjct: 348 SLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEA 407
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSV 527
D +++LLSACS + I + + ++ + C ++D+ G+ G + +
Sbjct: 408 DEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYAC--MVDLLGRAGELREAK 465
Query: 528 KIFNEMT-DRNVITWTALISA 547
++ M + V W L+SA
Sbjct: 466 ELILSMPMEPTVGVWQTLLSA 486
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 188/454 (41%), Gaps = 39/454 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+RNVVS+ +++ + G + LR+F M G P +FT L G Q
Sbjct: 65 MPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQ 124
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ ++ G F V +L+ +Y + + VF+ +P ++L TWNS++S + G
Sbjct: 125 IHGVCVRTG-FEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 183
Query: 121 FVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD--YELL 177
D + +F E+ R + E +F ++ S G Q+H + G +
Sbjct: 184 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+A +L+++Y +C + A ++F +E R+ + W T+I A+ +A+ L+ R
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V + V+ A GK +H K DV V ++LVD Y KC A
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 363
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F E+ +N+VSW A+I G L E +Q
Sbjct: 364 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQ---------------------- 401
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAG 413
G E E +L+++ + SGL+ + + + + R + P +
Sbjct: 402 --------EEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVD 453
Query: 414 IYNRTGQYNETVKL-LSQLERPDIVSWNIVIAAC 446
+ R G+ E +L LS P + W +++AC
Sbjct: 454 LLGRAGELREAKELILSMPMEPTVGVWQTLLSAC 487
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
LL A ++ +L G LH + K SDT + N LIDMY KCG + + ++F+ M
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGF-GSDTMLNNNLIDMYAKCGKLHMAGEVFDGM 65
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+RNV++WTAL+ +G A+ L F EM G P+ L A L AC GG R G+
Sbjct: 66 PERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKAC--GGGTRAGV 123
Query: 594 EL 595
++
Sbjct: 124 QI 125
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 161/600 (26%), Positives = 284/600 (47%), Gaps = 53/600 (8%)
Query: 73 ADAFVGTALLGLYGRHGCLD--EVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFC 130
A F+ LL Y R G + ++MPR++ V++N ++ + + G + F
Sbjct: 32 ASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRRNAVSYNLVIVAYSRAGLPALSLATFA 91
Query: 131 ELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCA 190
+ ++ + S D+ G+ +H +V+ G L ++NS+ +MY +C
Sbjct: 92 RARAWARVVDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCG 151
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
+ A ++F E RD VSWN ++ + + LE++ M + N +I
Sbjct: 152 EMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIK 211
Query: 251 SC---------AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
C + + +++H V+K L+ D+F+ SA++D YAK L A F
Sbjct: 212 CCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFK 271
Query: 302 EISNKNIVSWNALILGY----ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQ 356
+ + N++ NA+I G+ A+ + ++ L EL G +P+EF+FS +LR+ +LA +
Sbjct: 272 SVPDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGE 331
Query: 357 L---LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q+H +++ ++ Y+ +L+ Y+ SG + D
Sbjct: 332 FGFGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGY-------------------- 371
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+ L + D+V W VI+ C N ++E L LF+ + PD +
Sbjct: 372 ------------RCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFA 419
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
S+++AC+ L G + L K+ + T + N I M + G + ++ + F EM
Sbjct: 420 MSSVMNACASLAVARTGEQIQCLAVKSGF-NRFTAMGNSFIHMCARSGDVDAATRRFQEM 478
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLVREG 592
R+V++W+A+IS+ +G A+ AL F EM + P+ + +++LTAC HGGLV EG
Sbjct: 479 ESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDEG 538
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ + MN YG+ P + H CVVDLL R G L +AE I F +A++WR+ L C+
Sbjct: 539 LRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCR 598
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 138/576 (23%), Positives = 267/576 (46%), Gaps = 52/576 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVEGA 59
MP RN VS+N +I AYSR G +L F +FT+ L +C V
Sbjct: 62 MPRRNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTG 121
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ +++ G F+ ++ +Y R G + E VF+ + V+WN+++S + +
Sbjct: 122 KAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRA 181
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIH------GLSNEQDLEFG---EQIHGLVIKN 170
G E+ + +F + R + + +I + D+ G E +HG V+K
Sbjct: 182 GAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKA 241
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG---KAL 227
G D +L +A+++++MY + + +A +FK V +V+ N +I E +AL
Sbjct: 242 GLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREAL 301
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
LY + + P++ +F ++ +C GK IH +V+K++ + DV++GSAL+D Y
Sbjct: 302 GLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSALIDLY 361
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFS 346
+ +E + CF + +++V W ++I G ++ L E ++ G RP+ F S
Sbjct: 362 SGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDVFAMS 421
Query: 347 HVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
V+ + + + Q+ CL ++ G+ + TA+
Sbjct: 422 SVMNACASLAVARTGEQIQCLAVKSGFNRF------------------------TAMG-- 455
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
N + R+G + + ++E D+VSW+ VI++ AH+G ++ L +F M
Sbjct: 456 ------NSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEM 509
Query: 463 RAARIYPDN-YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
A++ P N TF+S+L+ACS + G +G++ +S C ++D+ G+ G
Sbjct: 510 LDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAG 569
Query: 522 SIGSSVK-IFNEMTDRNVITWTALISALGLNGFAQR 556
+ + I + + + W +L+++ ++G +R
Sbjct: 570 RLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMER 605
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 160/502 (31%), Positives = 237/502 (47%), Gaps = 41/502 (8%)
Query: 159 FGEQIHGLVIKNGFD-YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGAL 217
G IH +I+ ++N LVNMY + + SA+ + +R VV+W ++I
Sbjct: 24 LGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGC 83
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
+ F AL + M D V PN TF V + A +Q + GK IH +K + DV
Sbjct: 84 VHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDV 143
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL-GYASKSSPTSIFLLIELLQL 336
FVG + D Y K A F E+ +N+ +WNA I + S +I E L +
Sbjct: 144 FVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCV 203
Query: 337 GYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
PN TF L + + L QLH I+R GY+ V L+ Y K G I A
Sbjct: 204 HGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSA 263
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
++NR G R ++VSW ++AA N +
Sbjct: 264 -------------------EMVFNRIGN------------RKNVVSWCSMLAALVQNHEE 292
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNM 512
+ +F R + P ++ S+LSAC++L L LG S+H L K + + FV +
Sbjct: 293 ERACMVFLQAR-KEVEPTDFMISSVLSACAELGGLELGRSVHALAVKA-CVEDNIFVGSA 350
Query: 513 LIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF--LGFK 570
L+DMYGKCGSI ++ ++F+E+ +RN++TW A+I G AL F EM G +
Sbjct: 351 LVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIR 410
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
P V LI++L+ C G V G+++FE M +YG+EP +H+ CVVDLL R G + A +
Sbjct: 411 PSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYE 470
Query: 631 IITTMPFPPNALIWRTFLEGCQ 652
I M P +W L C+
Sbjct: 471 FIQNMAIQPTISVWGALLGACR 492
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 239/494 (48%), Gaps = 27/494 (5%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLN--PVEGAQL 61
R VV++ S+IS AL F M +P FTF + + P+ G Q+
Sbjct: 71 RTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQI 130
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
LK G+ D FVG + +Y + G + ++F++MP+++L TWN+ +S +
Sbjct: 131 HGLALKGGMI-YDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRR 189
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
D + F E + +F ++ + L G Q+H +++ G+ ++ VAN
Sbjct: 190 SLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANG 249
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
L++ Y +C I SAE +F + R +VVSW +++ AL ++ +A ++L+ + V P
Sbjct: 250 LIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEP 308
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
V+++CA L LG+S+HA +K +E ++FVGSALVD Y KC ++E A F
Sbjct: 309 TDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVF 368
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL---GYRPNEFTFSHVL-------- 349
SE+ +N+V+WNA+I GYA + L E + L G RP+ T +L
Sbjct: 369 SELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGA 428
Query: 350 --RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
R F+ ++L+ I G E++ V+ L +SGL+ A F+ + I +
Sbjct: 429 VERGIQIFESMRLN-YGIEPGAEHFACVVDLL----GRSGLVDRAYEFIQNMAIQPTISV 483
Query: 408 ANIIAG---IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+ G ++ +T + L +L+ D + ++ A G ++E + K M+
Sbjct: 484 WGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKD 543
Query: 465 ARIYPD-NYTFVSL 477
I + Y+++++
Sbjct: 544 IGIKKNVGYSWIAV 557
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 189/423 (44%), Gaps = 57/423 (13%)
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIK-NALECDVFVGSALVDFYAKCDNLEGAHLCF 300
Q ++ S SILG++IHA +I+ + F+ + LV+ Y+K D L A
Sbjct: 6 QNLLGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVL 65
Query: 301 SEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL-- 357
S + +V+W +LI G ++ ++ + + +PN+FTF V ++S Q+
Sbjct: 66 SLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPM 125
Query: 358 --LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
Q+H L + K G+I D + + +Y
Sbjct: 126 TGKQIHGLAL-------------------KGGMIYDVFVGCSCFD-------------MY 153
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+TG + + ++ + ++ +WN I+ + + + FK P++ TF
Sbjct: 154 CKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFC 213
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
+ L+AC + L LG LH I + D V N LID YGKCG I S+ +FN + +
Sbjct: 214 AFLNACVDMVRLNLGRQLHAFIVRCG-YKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGN 272
Query: 536 R-NVITWTALISALGLNGFAQRA----LEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
R NV++W ++++AL N +RA L+ +E+E P + +VL+AC G
Sbjct: 273 RKNVVSWCSMLAALVQNHEEERACMVFLQARKEVE-----PTDFMISSVLSACAELG--- 324
Query: 591 EGMELFERMNR---SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
G+EL ++ VE + +VD+ + G ++ AE++ + +P N + W
Sbjct: 325 -GLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELP-ERNLVTWNAM 382
Query: 648 LEG 650
+ G
Sbjct: 383 IGG 385
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 129/258 (50%), Gaps = 7/258 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
MP RN+ ++N+ IS + DA+ F + EP TF L+ D + G
Sbjct: 169 MPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLG 228
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
QL A +++ G + D V L+ YG+ G + VF + RK++V+W S+++
Sbjct: 229 RQLHAFIVRCG-YKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALV 287
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ E +F + R EV T+ V+ + LE G +H L +K + +
Sbjct: 288 QNHEEERACMVFLQ-ARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIF 346
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V ++LV+MY +C I +AE++F ++ R++V+WN +IG A + AL L+ M++
Sbjct: 347 VGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGS 406
Query: 238 --VFPNQTTFVYVINSCA 253
+ P+ T + +++ C+
Sbjct: 407 HGIRPSYVTLISILSVCS 424
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
I+P N L SA S C++ LG ++H I +T + +F+ N L++MY K + S+
Sbjct: 3 IHPQNLLGSLLESAVSTHCSI-LGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSA 61
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ + R V+TWT+LIS N AL F M +P+ V A
Sbjct: 62 QHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKA 117
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI--NRGFEPTQFTFGGLLS-CDSLNPVE 57
+P+RN+V++N++I Y+ G ++ ALR+F M + G P+ T +LS C + VE
Sbjct: 371 LPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVE 430
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSI 115
G Q+ S+ N A ++ L GR G +D ++M + ++ W +++
Sbjct: 431 RGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGA 490
Query: 116 FGKHGFVE 123
HG E
Sbjct: 491 CRMHGKTE 498
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 155/506 (30%), Positives = 250/506 (49%), Gaps = 56/506 (11%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
G +HGLV+K G DY +V +SL++MY +C A + F +V +D++SW ++I A +
Sbjct: 586 GRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSR 645
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
+ ++++ M V ++P+ +++S + K+ H +I+ D V
Sbjct: 646 MGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMV 705
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS-IFLLIELLQLGY 338
+AL+ Y K L+ A F ++ +N +WN ++ GY I L E+ LG
Sbjct: 706 QNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKIGLIMKCIGLFREMQCLGI 765
Query: 339 R------------PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
++ +H+ RS +HC +I+ + V SL+ Y KS
Sbjct: 766 ESDSNSLVSVVSSCSQLGATHLARS--------IHCYMIKNLMDENVSVNNSLIDMYGKS 817
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
G ++ +A IPR +V N + I++
Sbjct: 818 GNLT--IARRIFCRIPRDIVTWNTL-------------------------------ISSY 844
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
AH G + E L L+ M + P++ T V +LSACS L +L G +H I + +
Sbjct: 845 AHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEGEKVHNYINGGK-FEFN 903
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
+ LIDMY KCG + S +IFN M +R+VITW +IS G++G A+ A+E F++ME
Sbjct: 904 LSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEXFQQMEE 963
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
KP+ + +AVL+AC H GLV+EG LF +M + Y V P + HY C+VDLL R G+L+
Sbjct: 964 SSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKM-QDYSVAPNLKHYACMVDLLGRSGNLQ 1022
Query: 627 EAEKIITTMPFPPNALIWRTFLEGCQ 652
EAE ++ +MP P+ +W L C+
Sbjct: 1023 EAEALVLSMPISPDGGVWGALLSSCK 1048
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 234/501 (46%), Gaps = 35/501 (6%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQ 60
+++++S+ S+ISAYSR G+ + + MF M+ G P +LS +S+ E
Sbjct: 630 NKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKA 689
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+++ + D V ALL +Y + G L F + ++ WN +VS +GK G
Sbjct: 690 FHGLIIRRH-YTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKIG 748
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ C+ LF E+ + +S V V+ S IH +IKN D + V N
Sbjct: 749 LIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDENVSVNN 808
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL++MY + + A ++F + RD+V+WNT+I + A +F +AL LY +M ++ + P
Sbjct: 809 SLIDMYGKSGNLTIARRIFCRIP-RDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKP 867
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N T V V+++C+ L + G+ +H + E ++ + +AL+D YAKC LE + F
Sbjct: 868 NSATLVXVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIF 927
Query: 301 SEISNKNIVSWNALILGYASKSSPTS-IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
+ + +++++WN +I GY S I ++ + +PN TF VL +
Sbjct: 928 NSMHERDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSAC------- 980
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
H +++ G +Y+ G + + A N+ +++ R+G
Sbjct: 981 AHAGLVKEG----KYLFGKMQD-------------YSVAPNLKHYACMVDLLG----RSG 1019
Query: 420 QYNETVKL-LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
E L LS PD W ++++C + + + + + K+ + + D Y +V +
Sbjct: 1020 NLQEAEALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIXSDVENDGY-YVMIS 1078
Query: 479 SACSKLCNLALGSSLHGLIKK 499
+ S + G++K+
Sbjct: 1079 NMYSSIGKWEEAEKARGIMKE 1099
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 127/509 (24%), Positives = 243/509 (47%), Gaps = 40/509 (7%)
Query: 45 GGLLSCDSLNPV-EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR 103
GG +C +L + EG L V+K G+ + V ++LL +Y + G +E F ++
Sbjct: 572 GGFQACGNLGALLEGRCLHGLVVKTGMDYSQV-VQSSLLSMYSKCGNPEEAHRSFCEVLN 630
Query: 104 KSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI 163
K +++W S++S + + G+ +C+ +F E++ S + ++ SN + +
Sbjct: 631 KDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAF 690
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
HGL+I+ + + +V N+L++MY + + AEK F V ++ +WN ++ +
Sbjct: 691 HGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKIGLI 750
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
K + L+ M + + + V V++SC+ L + L +SIH +IKN ++ +V V ++L
Sbjct: 751 MKCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDENVSVNNSL 810
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNE 342
+D Y K NL A F I ++IV+WN LI YA L + + L +PN
Sbjct: 811 IDMYGKSGNLTIARRIFCRIP-RDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNS 869
Query: 343 FTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
T VL + H + G + + Y+ G G L+ TAL
Sbjct: 870 ATLVXVLSAC-------SHLASLEEGEKVHNYING---------GKFEFNLSIATAL--- 910
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
+Y + GQ ++ ++ + + D+++WN++I+ +GD + +E F+ M
Sbjct: 911 ---------IDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEXFQQM 961
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS-DTFVCNMLIDMYGKCG 521
+ P+ TF+++LSAC+ + G L G ++ + + + C ++D+ G+ G
Sbjct: 962 EESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYAC--MVDLLGRSG 1019
Query: 522 SIGSSVKIFNEM---TDRNVITWTALISA 547
++ + + M D V W AL+S+
Sbjct: 1020 NLQEAEALVLSMPISPDGGV--WGALLSS 1046
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 195/424 (45%), Gaps = 41/424 (9%)
Query: 232 RMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
R+ D PN T +C L + G+ +H V+K ++ V S+L+ Y+KC
Sbjct: 557 RIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCG 616
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSSPTS-IFLLIELLQLGYRPNEFTFSHVL- 349
N E AH F E+ NK+I+SW ++I Y+ T I + E+L G P+ S +L
Sbjct: 617 NPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLS 676
Query: 350 ---RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
S F+ H LIIR Y + V +L++ Y K G + A F
Sbjct: 677 SFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFF---------- 726
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
G+ NE + +WN++++ G + + LF+ M+
Sbjct: 727 ------------GRVNEQ----------NFEAWNLMVSGYGKIGLIMKCIGLFREMQCLG 764
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
I D+ + VS++S+CS+L L S+H + K ++ + V N LIDMYGK G++ +
Sbjct: 765 IESDSNSLVSVVSSCSQLGATHLARSIHCYMIKN-LMDENVSVNNSLIDMYGKSGNLTIA 823
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
+IF + R+++TW LIS+ G AL + +M KP+ L+ VL+AC H
Sbjct: 824 RRIFCRIP-RDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHL 882
Query: 587 GLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRT 646
+ EG ++ +N E + ++D+ + G L+++ +I +M + + W
Sbjct: 883 ASLEEGEKVHNYINGG-KFEFNLSIATALIDMYAKCGQLEKSREIFNSM-HERDVITWNV 940
Query: 647 FLEG 650
+ G
Sbjct: 941 MISG 944
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 142/671 (21%), Positives = 272/671 (40%), Gaps = 39/671 (5%)
Query: 7 VSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQASV 65
+ +N +IS Y G +E M + + + P T+ L+ C S N VE A+
Sbjct: 193 LPYNHMISLYISDGQLEKVPGM-IQELKKNTSPDVVTYNLWLTVCASQNDVETAEKVLLE 251
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM----PRKSLVTWNSIVSIFGKHGF 121
+K D ++L LY + G LD+ + +M RK + ++S++S+
Sbjct: 252 IKKAKIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQD 311
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ ++ +L + ++ + +I L + E E ++ + V N
Sbjct: 312 KDGVHRIWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNI 371
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVV----SWNTIIGALAESENFGKALELYLRM--SV 235
L+ Y + AEK + + R + +W + + + K L+ + + SV
Sbjct: 372 LLAAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSV 431
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
P++ V + Q +I G +++ A + + L+ YAK +
Sbjct: 432 KKWNPDEKLVREVYKNLEE-QGNIEGAEKVLVILRKAGHVSTEIYNWLLRAYAKAGKMP- 489
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVL-RSSL 353
L +E K+ V + ++S + L LL + R EF H+ S +
Sbjct: 490 --LIVAEWMKKDKVEMDEETHRLIKETSKMCXVQRLDPLLCICIRNVEFWRRHMNGESKM 547
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL------AFVTALNIPRAVVP 407
+ L C + R+G + +L + G + L V + + V
Sbjct: 548 GLECL---CEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVV 604
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+ + +Y++ G E + ++ DI+SW +I+A + G E +++F M + I
Sbjct: 605 QSSLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGI 664
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
YPD +LS+ S + + HGLI + + D V N L+ MY K G + +
Sbjct: 665 YPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHY-TLDQMVQNALLSMYCKFGFLKLAE 723
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
K F + ++N W ++S G G + + FREM+ LG + D +L++V+++C G
Sbjct: 724 KFFGRVNEQNFEAWNLMVSGYGKIGLIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQLG 783
Query: 588 LVREGMELFERMNRSYGVEPEMDH----YHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
R Y ++ MD + ++D+ + G+L A +I + P + +
Sbjct: 784 ATH-----LARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRI--PRDIVT 836
Query: 644 WRTFLEGCQRC 654
W T + C
Sbjct: 837 WNTLISSYAHC 847
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 29/190 (15%)
Query: 378 SLMTSYAKSGLISDALAFVTALN---IPRAVVPANIIAGIYNRTGQYNETVKLLSQLER- 433
+L+ +Y ++ + A A + ++ + +P N + +Y GQ + ++ +L++
Sbjct: 162 ALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQELKKN 221
Query: 434 --PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS----------AC 481
PD+V++N+ + CA D + ++ ++ A+I PD T+ SL + A
Sbjct: 222 TSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDKAA 281
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG--SIGSSVK-IFNEMTDRNV 538
+ L + +S G I + +IS T +M K G I +K IF++M D
Sbjct: 282 TTLNEMEKRTSRKGRIAYSSLISLHT-------NMQDKDGVHRIWKKLKSIFHKMND--- 331
Query: 539 ITWTALISAL 548
+T +IS+L
Sbjct: 332 AEYTCMISSL 341
>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 739
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 170/650 (26%), Positives = 315/650 (48%), Gaps = 41/650 (6%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQA 63
N++S + + C + R + +N + F + LL SC++L ++ ++ A
Sbjct: 17 NILSHRHDLLRFRFCSFSSVLFRT--HHLNSHYLTCSFPYSSLLHSCNNLQALK--RIHA 72
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
S++ + F + V + L+ LY + S+ + V WNSI+ G
Sbjct: 73 SLIVSSGFQPLS-VASKLITLYSQLNDFRSAFSICNSFEEPNTVIWNSIIKSHVDSGLFG 131
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGL-SNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ + + VA +F + + S +E+GE +H + +K GF ++ N++
Sbjct: 132 YALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEYGETVHCVAMKMGFGQDVYFGNTM 191
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
+ +Y +C I +A K+F ++ RD+VSW +II E+F + +L+ +M +++ PN
Sbjct: 192 LEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGESFSRGFKLFNKMRMEME-PNS 250
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL-EGAHLCFS 301
T V ++ +C+ ++ G+ +H+ VIK D V ++++ Y K E FS
Sbjct: 251 VTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSILRMYTKTGGSGEEVETFFS 310
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
EI ++I+SWN LI Y+ + ++ ++ R NE +R + + L
Sbjct: 311 EIEERDIISWNILIAFYSFRG---------DIAEVAERFNE------MRREVTSSIESLT 355
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
++ + G L S K+GL V + +Y + G
Sbjct: 356 LVVSAIANCANLSEGGMLHCSAIKTGL--------------HDTVLMTCLLALYAKCGAL 401
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
+ +L + + ++W+ +++ NG +KE +EL++ M A+ + P++ +L+ A
Sbjct: 402 EISAQLFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAY 461
Query: 482 SKLCNLALGSSLHGLIKK--TEIISSDTFVCNM-LIDMYGKCGSIGSSVKIFNEMTDRNV 538
+ L L LG + H + + D+ L++MY +CGSI S++ FN + ++V
Sbjct: 462 THLGALQLGKATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDV 521
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
+TWT++I G +G A AL+ F+ M +P+ V +++L+AC H GLVREG E+F
Sbjct: 522 VTWTSMIEGFGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVFHS 581
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
M + +EP+++HY C+VDLL R G LKEA +I + P++ IW L
Sbjct: 582 MKWGFRIEPDLNHYTCMVDLLGRSGKLKEALTVILKLVTCPDSRIWGALL 631
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 145/513 (28%), Positives = 245/513 (47%), Gaps = 42/513 (8%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHG-LVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
+ ++H +N Q L+ +IH L++ +GF L VA+ L+ +Y Q SA +
Sbjct: 54 YSSLLHSCNNLQALK---RIHASLIVSSGFQ-PLSVASKLITLYSQLNDFRSAFSICNSF 109
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI-LG 261
E + V WN+II + +S FG AL Y RM V + TF + + L + G
Sbjct: 110 EEPNTVIWNSIIKSHVDSGLFGYALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEYG 169
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
+++H +K DV+ G+ +++ Y KC ++ A F E++++++VSW ++I GY
Sbjct: 170 ETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYG 229
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMT 381
S + F L +++ PN T +L++ AF+ + G E + YV+
Sbjct: 230 ESFSRGFKLFNKMRMEMEPNSVTMVVMLQACSAFE-------SVNEGRELHSYVI----- 277
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK-LLSQLERPDIVSWN 440
K G + D R+V N I +Y +TG E V+ S++E DI+SWN
Sbjct: 278 ---KKGFMVD-----------RSV--QNSILRMYTKTGGSGEEVETFFSEIEERDIISWN 321
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
I+IA + GD EV E F MR + + ++SA + NL+ G LH KT
Sbjct: 322 ILIAFYSFRGDIAEVAERFNEMRR-EVTSSIESLTLVVSAIANCANLSEGGMLHCSAIKT 380
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
+ DT + L+ +Y KCG++ S ++F ++ RN ITW++++S NGF + A+E
Sbjct: 381 GL--HDTVLMTCLLALYAKCGALEISAQLFRDIPHRNSITWSSMMSGFTQNGFFKEAIEL 438
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL- 619
+++M G +P+ + ++ A H G ++ G R+ PE D LL
Sbjct: 439 YQQMLASGLQPNHDIISTLVIAYTHLGALQLGKATHAFFIRNLSSWPEEDSAPLETSLLN 498
Query: 620 --VRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+R G + A I + + W + +EG
Sbjct: 499 MYIRCGSISSA-LICFNRVVVKDVVTWTSMIEG 530
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 229/495 (46%), Gaps = 56/495 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
M R++VS+ SIIS Y ++F M EP T +L +C + V EG
Sbjct: 211 MTHRDLVSWTSIISGYIYGESFSRGFKLFNKM-RMEMEPNSVTMVVMLQACSAFESVNEG 269
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHG-CLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+L + V+K G F D V ++L +Y + G +EV + F ++ + +++WN +++ +
Sbjct: 270 RELHSYVIKKG-FMVDRSVQNSILRMYTKTGGSGEEVETFFSEIEERDIISWNILIAFYS 328
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + + F E+ R EV + S V+ ++N +L G +H IK G ++ +
Sbjct: 329 FRGDIAEVAERFNEM-RREVTSSIESLTLVVSAIANCANLSEGGMLHCSAIKTGL-HDTV 386
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ L+ +Y +C + + ++F+D+ R+ ++W++++ ++ F +A+ELY +M
Sbjct: 387 LMTCLLALYAKCGALEISAQLFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASG 446
Query: 238 VFPNQ---TTFVYVINSCAGLQNSILGKSIHAKVIKN----ALECDVFVGSALVDFYAKC 290
+ PN +T V LQ LGK+ HA I+N E + ++L++ Y +C
Sbjct: 447 LQPNHDIISTLVIAYTHLGALQ---LGKATHAFFIRNLSSWPEEDSAPLETSLLNMYIRC 503
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL 349
++ A +CF+ + K++V+W ++I G+ + + ++ +L+ +PN TF
Sbjct: 504 GSISSALICFNRVVVKDVVTWTSMIEGFGTHGLAFEALKFFKSMLESEVQPNSVTFL--- 560
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA- 408
SL+++ + SGL+ + ++ + P
Sbjct: 561 ----------------------------SLLSACSHSGLVREGCEVFHSMKWGFRIEPDL 592
Query: 409 ---NIIAGIYNRTGQYNETVKLLSQLER-PDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+ + R+G+ E + ++ +L PD W ++AA + D K L + +
Sbjct: 593 NHYTCMVDLLGRSGKLKEALTVILKLVTCPDSRIWGALLAASRVHEDKK--LGEYAAEKL 650
Query: 465 ARIYPDNYTFVSLLS 479
+ PDN + +L S
Sbjct: 651 LELEPDNVGYYTLWS 665
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 147/463 (31%), Positives = 240/463 (51%), Gaps = 14/463 (3%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A K+F + DVV WN +I ++ + G+ + LYL M + V P+ TF +++N G
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN---G 143
Query: 255 LQNS----ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
L+ GK +H V+K L +++V +ALV Y+ C ++ A F +++ S
Sbjct: 144 LKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFS 203
Query: 311 WNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLII 365
WN +I GY K SI LL+E+ + P T VL + + L H +
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS 263
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
E + +L+ +YA G + A+ ++ + +I+ G R G
Sbjct: 264 ECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVER-GNLKLAR 322
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
Q+ D +SW I+I G + E LE+F+ M++A + PD +T VS+L+AC+ L
Sbjct: 323 TYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
+L +G + I K +I +D V N LIDMY KCG + K+F++M R+ TWTA++
Sbjct: 383 SLEIGEWIKTYIDKNKI-KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMV 441
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
L NG Q A++ F +M+ + +PD + + VL+AC H G+V + + F +M + +
Sbjct: 442 VGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRI 501
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
EP + HY C+VD+L R G +KEA +I+ MP PN+++W L
Sbjct: 502 EPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/537 (22%), Positives = 237/537 (44%), Gaps = 94/537 (17%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF----------GGLLSC 50
+P+ +VV +N++I +S+ + +R++L M+ G P TF GG L+C
Sbjct: 94 IPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALAC 153
Query: 51 DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWN 110
G +L V+K GL ++ +V AL+ +Y G +D VF+ ++ + +WN
Sbjct: 154 -------GKKLHCHVVKFGL-GSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWN 205
Query: 111 SIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
++S + + E+ + L E+ R+ V+ T + + V+ S +D + +++H V +
Sbjct: 206 LMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSEC 265
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN-------- 222
+ L + N+LVN Y C + A ++F+ ++ RDV+SW +I+ E N
Sbjct: 266 KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYF 325
Query: 223 -----------------------FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
F ++LE++ M + P++ T V V+ +CA L +
Sbjct: 326 DQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLE 385
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
+G+ I + KN ++ DV VG+AL+D Y KC E A F ++ ++ +W A+++G A
Sbjct: 386 IGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLA 445
Query: 320 SK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS 378
+ +I + ++ + +P++ T+ VL
Sbjct: 446 NNGQGQEAIKVFFQMQDMSIQPDDITYLGVL----------------------------- 476
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG----IYNRTGQYNETVKLLSQLE-R 433
++ SG++ A F + + P+ + G + R G E ++L ++
Sbjct: 477 --SACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMN 534
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
P+ + W ++ A + D E + + + PDN +L LCN+ G
Sbjct: 535 PNSIVWGALLGASRLHND--EPMAELAAKKILELEPDNGAVYAL------LCNIYAG 583
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/509 (23%), Positives = 237/509 (46%), Gaps = 18/509 (3%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
+F +P +V WN+++ + K + + L+ +++ V +F +++GL +
Sbjct: 89 KLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDG 148
Query: 156 D-LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
L G+++H V+K G L V N+LV MY C + A +F DV SWN +I
Sbjct: 149 GALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMI 208
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
+ + +++EL + M ++V P T + V+++C+ +++ L K +H V + E
Sbjct: 209 SGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTE 268
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
+ + +ALV+ YA C ++ A F + ++++SW +++ GY + + + +
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM 328
Query: 335 QLGYRPN-EFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA- 392
+ R + LR+ + L++ + G E+ + S++T+ A G +
Sbjct: 329 PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388
Query: 393 --LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
++ I VV N + +Y + G + K+ +++ D +W ++ A+NG
Sbjct: 389 WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNG 448
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
+E +++F M+ I PD+ T++ +LSAC+ + ++ I
Sbjct: 449 QGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHY 508
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEF 566
++DM G+ G + + +I +M + N I W AL+ A L+ A+ A +K E+E
Sbjct: 509 GCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELE- 567
Query: 567 LGFKPDRVALIAVL----TACRHGGLVRE 591
PD A+ A+L C+ +RE
Sbjct: 568 ----PDNGAVYALLCNIYAGCKRWKDLRE 592
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 128/280 (45%), Gaps = 10/280 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP R+ +S+ +I Y R G ++L +F M + G P +FT +L+ C L +E
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + + D VG AL+ +Y + GC ++ VF DM ++ TW ++V +
Sbjct: 388 EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVI----HGLSNEQDLEFGEQIHGLVIKNGFDYE 175
G ++ + +F ++ + + +++GV+ H +Q +F ++ + +
Sbjct: 448 GQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRS---DHRIEPS 504
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRMS 234
L+ +V+M + + A ++ + + + + + W ++GA + N EL +
Sbjct: 505 LVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGA-SRLHNDEPMAELAAKKI 563
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
+++ N + + N AG + + + K++ A++
Sbjct: 564 LELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIK 603
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 147/463 (31%), Positives = 240/463 (51%), Gaps = 14/463 (3%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A K+F + DVV WN +I ++ + G+ + LYL M + V P+ TF +++N G
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN---G 143
Query: 255 LQNS----ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
L+ GK +H V+K L +++V +ALV Y+ C ++ A F +++ S
Sbjct: 144 LKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFS 203
Query: 311 WNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLII 365
WN +I GY K SI LL+E+ + P T VL + + L H +
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS 263
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
E + +L+ +YA G + A+ ++ + +I+ G R G
Sbjct: 264 ECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVER-GNLKLAR 322
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
Q+ D +SW I+I G + E LE+F+ M++A + PD +T VS+L+AC+ L
Sbjct: 323 TYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
+L +G + I K +I +D V N LIDMY KCG + K+F++M R+ TWTA++
Sbjct: 383 SLEIGEWIKTYIDKNKI-KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMV 441
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
L NG Q A++ F +M+ + +PD + + VL+AC H G+V + + F +M + +
Sbjct: 442 VGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRI 501
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
EP + HY C+VD+L R G +KEA +I+ MP PN+++W L
Sbjct: 502 EPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/509 (23%), Positives = 237/509 (46%), Gaps = 18/509 (3%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
+F +P +V WN+++ + K + + L+ +++ V +F +++GL +
Sbjct: 89 KLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDG 148
Query: 156 D-LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
L G+++H V+K G L V N+LV MY C + A +F DV SWN +I
Sbjct: 149 GALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMI 208
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
+ + +++EL + M ++V P T + V+++C+ +++ L K +H V + E
Sbjct: 209 SGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTE 268
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
+ + +ALV+ YA C ++ A F + ++++SW +++ GY + + + +
Sbjct: 269 PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM 328
Query: 335 QLGYRPN-EFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA- 392
+ R + LR+ + L++ + G E+ + S++T+ A G +
Sbjct: 329 PVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388
Query: 393 --LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
++ I VV N + +Y + G + K+ +++ D +W ++ A+NG
Sbjct: 389 WIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNG 448
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
+E +++F M+ I PD+ T++ +LSAC+ + ++ I
Sbjct: 449 QGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHY 508
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREMEF 566
++DM G+ G + + +I +M + N I W AL+ A L+ A+ A +K E+E
Sbjct: 509 GCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELE- 567
Query: 567 LGFKPDRVALIAVL----TACRHGGLVRE 591
PD A+ A+L C+ +RE
Sbjct: 568 ----PDNGAVYALLCNIYAGCKRWKDLRE 592
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/537 (22%), Positives = 237/537 (44%), Gaps = 94/537 (17%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF----------GGLLSC 50
+P+ +VV +N++I +S+ + +R++L M+ G P TF GG L+C
Sbjct: 94 IPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALAC 153
Query: 51 DSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWN 110
G +L V+K GL ++ +V AL+ +Y G +D VF+ ++ + +WN
Sbjct: 154 -------GKKLHCHVVKFGL-GSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWN 205
Query: 111 SIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
++S + + E+ + L E+ R+ V+ T + + V+ S +D + +++H V +
Sbjct: 206 LMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSEC 265
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN-------- 222
+ L + N+LVN Y C + A ++F+ ++ RDV+SW +I+ E N
Sbjct: 266 KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYF 325
Query: 223 -----------------------FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
F ++LE++ M + P++ T V V+ +CA L +
Sbjct: 326 DQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLE 385
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
+G+ I + KN ++ DV VG+AL+D Y KC E A F ++ ++ +W A+++G A
Sbjct: 386 IGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLA 445
Query: 320 SK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS 378
+ +I + ++ + +P++ T+ VL
Sbjct: 446 NNGQGQEAIKVFFQMQDMSIQPDDITYLGVL----------------------------- 476
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG----IYNRTGQYNETVKLLSQLE-R 433
++ SG++ A F + + P+ + G + R G E ++L ++
Sbjct: 477 --SACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMN 534
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
P+ + W ++ A + D E + + + PDN +L LCN+ G
Sbjct: 535 PNSIVWGALLGASRLHND--EPMAELAAKKILELEPDNGAVYAL------LCNIYAG 583
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 128/280 (45%), Gaps = 10/280 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP R+ +S+ +I Y R G ++L +F M + G P +FT +L+ C L +E
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + + D VG AL+ +Y + GC ++ VF DM ++ TW ++V +
Sbjct: 388 EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANN 447
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVI----HGLSNEQDLEFGEQIHGLVIKNGFDYE 175
G ++ + +F ++ + + +++GV+ H +Q +F ++ + +
Sbjct: 448 GQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRS---DHRIEPS 504
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRMS 234
L+ +V+M + + A ++ + + + + + W ++GA + N EL +
Sbjct: 505 LVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGA-SRLHNDEPMAELAAKKI 563
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
+++ N + + N AG + + + K++ A++
Sbjct: 564 LELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIK 603
>gi|302767404|ref|XP_002967122.1| hypothetical protein SELMODRAFT_31963 [Selaginella moellendorffii]
gi|300165113|gb|EFJ31721.1| hypothetical protein SELMODRAFT_31963 [Selaginella moellendorffii]
Length = 482
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 148/469 (31%), Positives = 234/469 (49%), Gaps = 15/469 (3%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A ++F+D+E+R++ SW I+ A A+ + G AL+L RM + V P+ FV ++ SC G
Sbjct: 1 ARQVFEDMEVRNLFSWTAIVAAYAQRGHHGTALQLLRRMLGENVRPDGVIFVVLLGSCGG 60
Query: 255 LQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+ GK I +++ LE DV VG+AL+ Y +C + A F + KN VSW +
Sbjct: 61 PEALGTGKIIGECIVREGFLERDVVVGNALLSMYERCGDTGQAVRMFHALPLKNTVSWTS 120
Query: 314 LILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVL---------RSSLAFQ-LLQLHCL 363
+I A ++ L +L G + ++ TF+ VL R+S + +H L
Sbjct: 121 IIRAVAKNDGARALELFHAMLVEGIKVDKVTFTTVLTACSDLGSSRTSWGLKHATWIHGL 180
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA-VVPANIIAGIYNRTGQYN 422
I+ G E V +L Y + G + A + + AN++ +Y+R
Sbjct: 181 IVEAGLVMDEIVGATLTNLYGRCGELELAHELLKEAGMEFVNTKSANVLIVLYSRCNCLQ 240
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
E ++ + DIVSWN +I+A + KE +ELF+ M A P+ TF +L AC
Sbjct: 241 EARRIFDSMVIRDIVSWNSIISAYVLRDETKEAVELFRQMDLA---PNAVTFSVVLDACG 297
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
L + G +H I T + D V N LI+MY K G + + +F M ++V++W
Sbjct: 298 VLGDYKTGREIHEQIINTGLDHYDVGVGNSLINMYAKFGDLDEAALVFRLMEKQDVVSWN 357
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
+L+ FR M+ G P+ V I VL++C H GL+++ LF M +
Sbjct: 358 SLLGCFAQASGGDSCFALFRLMQLQGQVPNSVTFINVLSSCSHRGLLQQAQALFSSMEQD 417
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+GV P + H+ CVVDLL R G L EAE++ + MP P+ ++W FL C
Sbjct: 418 FGVSPTVQHFGCVVDLLGRKGRLDEAEELASEMPVAPSVVLWTAFLGAC 466
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 228/501 (45%), Gaps = 83/501 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
M RN+ S+ +I++AY++ G+ AL++ M+ P F LL SC + G
Sbjct: 8 MEVRNLFSWTAIVAAYAQRGHHGTALQLLRRMLGENVRPDGVIFVVLLGSCGGPEALGTG 67
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +++ G D VG ALL +Y R G + V +F +P K+ V+W SI+ K
Sbjct: 68 KIIGECIVREGFLERDVVVGNALLSMYERCGDTGQAVRMFHALPLKNTVSWTSIIRAVAK 127
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN------EQDLEFGEQIHGLVIKNGF 172
+ + LF ++ + + + +F V+ S+ L+ IHGL+++ G
Sbjct: 128 NDGAR-ALELFHAMLVEGIKVDKVTFTTVLTACSDLGSSRTSWGLKHATWIHGLIVEAGL 186
Query: 173 DYELLVANSLVNMYFQC------------AG---------------------IWSAEKMF 199
+ +V +L N+Y +C AG + A ++F
Sbjct: 187 VMDEIVGATLTNLYGRCGELELAHELLKEAGMEFVNTKSANVLIVLYSRCNCLQEARRIF 246
Query: 200 KDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
+ IRD+VSWN+II A + +A+EL+ +M + PN TF V+++C L +
Sbjct: 247 DSMVIRDIVSWNSIISAYVLRDETKEAVELFRQMD---LAPNAVTFSVVLDACGVLGDYK 303
Query: 260 LGKSIHAKVIKNALEC-DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
G+ IH ++I L+ DV VG++L++ YAK +L+ A L F + +++VSWN+L+ +
Sbjct: 304 TGREIHEQIINTGLDHYDVGVGNSLINMYAKFGDLDEAALVFRLMEKQDVVSWNSLLGCF 363
Query: 319 ASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLG 377
A S S F L L+QL G PN TF +VL
Sbjct: 364 AQASGGDSCFALFRLMQLQGQVPNSVTFINVL---------------------------- 395
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE- 432
+S + GL+ A A +++ V P + + R G+ +E +L S++
Sbjct: 396 ---SSCSHRGLLQQAQALFSSMEQDFGVSPTVQHFGCVVDLLGRKGRLDEAEELASEMPV 452
Query: 433 RPDIVSWNIVIAACAHNGDYK 453
P +V W + AC ++ D K
Sbjct: 453 APSVVLWTAFLGACTNHEDVK 473
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/496 (23%), Positives = 219/496 (44%), Gaps = 77/496 (15%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
VFEDM ++L +W +IV+ + + G + L ++ V FV ++ +
Sbjct: 3 QVFEDMEVRNLFSWTAIVAAYAQRGHHGTALQLLRRMLGENVRPDGVIFVVLLGSCGGPE 62
Query: 156 DLEFGEQIHGLVIKNGF-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
L G+ I +++ GF + +++V N+L++MY +C A +MF + +++ VSW +II
Sbjct: 63 ALGTGKIIGECIVREGFLERDVVVGNALLSMYERCGDTGQAVRMFHALPLKNTVSWTSII 122
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL------GKSIHAKV 268
A+A+++ +ALEL+ M V+ + ++ TF V+ +C+ L +S IH +
Sbjct: 123 RAVAKNDG-ARALELFHAMLVEGIKVDKVTFTTVLTACSDLGSSRTSWGLKHATWIHGLI 181
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHL--------------------------CFSE 302
++ L D VG+ L + Y +C LE AH C E
Sbjct: 182 VEAGLVMDEIVGATLTNLYGRCGELELAHELLKEAGMEFVNTKSANVLIVLYSRCNCLQE 241
Query: 303 ISN-------KNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
++IVSWN++I Y + L Q+ PN TFS VL +
Sbjct: 242 ARRIFDSMVIRDIVSWNSIISAYVLRDETKEAVELFR--QMDLAPNAVTFSVVLDA---- 295
Query: 356 QLLQLHCLII---RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
C ++ + G E +E ++ + + Y V N +
Sbjct: 296 ------CGVLGDYKTGREIHEQIINTGLDHY--------------------DVGVGNSLI 329
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G +E + +E+ D+VSWN ++ A LF+ M+ P++
Sbjct: 330 NMYAKFGDLDEAALVFRLMEKQDVVSWNSLLGCFAQASGGDSCFALFRLMQLQGQVPNSV 389
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
TF+++LS+CS L +L +++ +S ++D+ G+ G + + ++ +E
Sbjct: 390 TFINVLSSCSHRGLLQQAQALFSSMEQDFGVSPTVQHFGCVVDLLGRKGRLDEAEELASE 449
Query: 533 M-TDRNVITWTALISA 547
M +V+ WTA + A
Sbjct: 450 MPVAPSVVLWTAFLGA 465
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 7/230 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M R++VS+NSIISAY ++A+ +F M P TF +L +C L + G
Sbjct: 249 MVIRDIVSWNSIISAYVLRDETKEAVELFRQM---DLAPNAVTFSVVLDACGVLGDYKTG 305
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ ++ GL D VG +L+ +Y + G LDE VF M ++ +V+WNS++ F +
Sbjct: 306 REIHEQIINTGLDHYDVGVGNSLINMYAKFGDLDEAALVFRLMEKQDVVSWNSLLGCFAQ 365
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYELL 177
+ C LF + +F+ V+ S+ L+ + + + ++ G +
Sbjct: 366 ASGGDSCFALFRLMQLQGQVPNSVTFINVLSSCSHRGLLQQAQALFSSMEQDFGVSPTVQ 425
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKA 226
+V++ + + AE++ ++ + VV W +GA E+ +A
Sbjct: 426 HFGCVVDLLGRKGRLDEAEELASEMPVAPSVVLWTAFLGACTNHEDVKRA 475
>gi|302781640|ref|XP_002972594.1| hypothetical protein SELMODRAFT_97233 [Selaginella moellendorffii]
gi|300160061|gb|EFJ26680.1| hypothetical protein SELMODRAFT_97233 [Selaginella moellendorffii]
Length = 620
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 155/533 (29%), Positives = 260/533 (48%), Gaps = 48/533 (9%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN 222
IHGL++ G + N+L N+Y + + AE +F+ + +DVVSWNT+I LA + N
Sbjct: 35 IHGLILAAGLQSVTFLGNALANLYGRAGRLDEAELVFESIAHKDVVSWNTMITVLARAGN 94
Query: 223 FGKALELYLRM---SVDI-------------------------------VFPNQTTFVYV 248
+ALEL+ RM D+ V PN+ TFV V
Sbjct: 95 GERALELFQRMIHERRDVVSWNAIIRAYSQHGHRKSALEMFRRMQHECSVAPNEVTFVSV 154
Query: 249 INSCAGLQNSILGKSIHAKVIKNALE-CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
+ A + S L + IH + +N +VFVG++LV + KC ++ A F ++ ++
Sbjct: 155 LG--AAEEASEL-RMIHDRAAENGFHSSNVFVGNSLVHMHGKCGSVHDAKQLFDAMALQS 211
Query: 308 IVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAF-QLLQLHCLII 365
+ SWN+++ YA F L +Q G RP++ TF VL + Q+ L L+
Sbjct: 212 VSSWNSIVDAYAHNGLEREAFKLFRTMQHEGVRPDKVTFLTVLEVCTSLRQVRLLQELVT 271
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
G + + +L+ +A++ ISDA + + + N + Y + + +
Sbjct: 272 SAGLRSDVLLQTALLQVFARNSSISDAKRTFDGVR-DKDLFAWNTLLTAYAQCSRLEQAK 330
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC---- 481
++E ++VSWN + +A N LEL M+ PD TF + L AC
Sbjct: 331 AAFDRMEEKNLVSWNALASAYVQNAQGDAALELLASMQLEGTKPDRVTFFASLDACFTDI 390
Query: 482 --SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVI 539
++ + + +H I ++ + SD + N LI+MYGKCGS + ++F+ M +R ++
Sbjct: 391 SQVRMLHAQISRIIHRSIAESGFL-SDVIIDNTLINMYGKCGSPREARRVFDSMRERALV 449
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+W ++++ +G A + FR ++ G KPD VAL++V + C+H GL+ E ++
Sbjct: 450 SWNSIVTVAAQHGEVAEARKLFRGLQQEGLKPDNVALMSVASVCQHVGLLEEAFYYLFQL 509
Query: 600 NRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y V + + Y C+V LL R G L+EAE +I MPF PN +W+ L C+
Sbjct: 510 GTEYRVTAKRERYSCIVGLLGRIGWLEEAEAVIRKMPFKPNEAVWKNLLMSCK 562
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 206/475 (43%), Gaps = 93/475 (19%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
F+G AL LYGR G LDE VFE + K +V+WN+++++ + G E + LF ++
Sbjct: 49 FLGNALANLYGRAGRLDEAELVFESIAHKDVVSWNTMITVLARAGNGERALELFQRMIHE 108
Query: 136 E----------------------------------VALTESSFVGVIHGLSNEQDLEFGE 161
VA E +FV V+ +L
Sbjct: 109 RRDVVSWNAIIRAYSQHGHRKSALEMFRRMQHECSVAPNEVTFVSVLGAAEEASELRM-- 166
Query: 162 QIHGLVIKNGF-DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
IH +NGF + V NSLV+M+ +C + A+++F + ++ V SWN+I+ A A +
Sbjct: 167 -IHDRAAENGFHSSNVFVGNSLVHMHGKCGSVHDAKQLFDAMALQSVSSWNSIVDAYAHN 225
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSC---------------AGLQNSILGK--- 262
+A +L+ M + V P++ TF+ V+ C AGL++ +L +
Sbjct: 226 GLEREAFKLFRTMQHEGVRPDKVTFLTVLEVCTSLRQVRLLQELVTSAGLRSDVLLQTAL 285
Query: 263 ----------SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
S + + D+F + L+ YA+C LE A F + KN+VSWN
Sbjct: 286 LQVFARNSSISDAKRTFDGVRDKDLFAWNTLLTAYAQCSRLEQAKAAFDRMEEKNLVSWN 345
Query: 313 ALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA--FQLLQLHCLIIRMGY 369
AL Y + + L+ +QL G +P+ TF L + Q+ LH I R+
Sbjct: 346 ALASAYVQNAQGDAALELLASMQLEGTKPDRVTFFASLDACFTDISQVRMLHAQISRI-- 403
Query: 370 ENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLS 429
+ S A+SG +SD V+ N + +Y + G E ++
Sbjct: 404 ---------IHRSIAESGFLSD-------------VIIDNTLINMYGKCGSPREARRVFD 441
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
+ +VSWN ++ A +G+ E +LF+ ++ + PDN +S+ S C +
Sbjct: 442 SMRERALVSWNSIVTVAAQHGEVAEARKLFRGLQQEGLKPDNVALMSVASVCQHV 496
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 210/484 (43%), Gaps = 53/484 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLLSCDSLNPVEGAQLQ 62
R+VVS+N+II AYS+ G+ + AL MF M + P + TF +L + E +
Sbjct: 110 RDVVSWNAIIRAYSQHGHRKSALEMFRRMQHECSVAPNEVTFVSVLGA-AEEASELRMIH 168
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+NG ++ FVG +L+ ++G+ G + + +F+ M +S+ +WNSIV + +G
Sbjct: 169 DRAAENGFHSSNVFVGNSLVHMHGKCGSVHDAKQLFDAMALQSVSSWNSIVDAYAHNGLE 228
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIH------------------GLSNEQDLE------ 158
+ LF + V + +F+ V+ GL ++ L+
Sbjct: 229 REAFKLFRTMQHEGVRPDKVTFLTVLEVCTSLRQVRLLQELVTSAGLRSDVLLQTALLQV 288
Query: 159 FGEQIHGLVIKNGF----DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
F K F D +L N+L+ Y QC+ + A+ F +E +++VSWN +
Sbjct: 289 FARNSSISDAKRTFDGVRDKDLFAWNTLLTAYAQCSRLEQAKAAFDRMEEKNLVSWNALA 348
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC------AGLQNSILGKSIHAKV 268
A ++ ALEL M ++ P++ TF +++C + ++ + + IH +
Sbjct: 349 SAYVQNAQGDAALELLASMQLEGTKPDRVTFFASLDACFTDISQVRMLHAQISRIIHRSI 408
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
++ DV + + L++ Y KC + A F + + +VSWN+++ A
Sbjct: 409 AESGFLSDVIIDNTLINMYGKCGSPREARRVFDSMRERALVSWNSIVTVAAQHGEVAEAR 468
Query: 329 LLIE-LLQLGYRPNEFTF-------SHV-LRSSLAFQLLQLHC-LIIRMGYENYEYVLGS 378
L L Q G +P+ HV L + L QL + E Y ++G
Sbjct: 469 KLFRGLQQEGLKPDNVALMSVASVCQHVGLLEEAFYYLFQLGTEYRVTAKRERYSCIVGL 528
Query: 379 LMTSYAKSGLISDALAFVTALNI-PRAVVPANIIAG--IYNRTGQYNETVKLLSQLERPD 435
L + G + +A A + + P V N++ I+N + K L +L+ D
Sbjct: 529 L----GRIGWLEEAEAVIRKMPFKPNEAVWKNLLMSCKIHNDVARGARVAKELLELDSAD 584
Query: 436 IVSW 439
++
Sbjct: 585 SATY 588
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 165/362 (45%), Gaps = 48/362 (13%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
++IH ++ L+ F+G+AL + Y + L+ A L F I++K++VSWN +I A
Sbjct: 33 RTIHGLILAAGLQSVTFLGNALANLYGRAGRLDEAELVFESIAHKDVVSWNTMITVLARA 92
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVLR---------SSLA-FQLLQLHCLIIRMGYEN 371
+ L + + + R + +++ ++R S+L F+ +Q C +
Sbjct: 93 GNGERALELFQRM-IHERRDVVSWNAIIRAYSQHGHRKSALEMFRRMQHECSVA-PNEVT 150
Query: 372 YEYVLGSLMTSYAKSGLISDALA---FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
+ VLG+ + ++ +I D A F ++ V N + ++ + G ++ +L
Sbjct: 151 FVSVLGAAEEA-SELRMIHDRAAENGFHSS-----NVFVGNSLVHMHGKCGSVHDAKQLF 204
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL---- 484
+ + SWN ++ A AHNG +E +LF+ M+ + PD TF+++L C+ L
Sbjct: 205 DAMALQSVSSWNSIVDAYAHNGLEREAFKLFRTMQHEGVRPDKVTFLTVLEVCTSLRQVR 264
Query: 485 ------------CNLALGSSLHGLIKKTEIIS-----------SDTFVCNMLIDMYGKCG 521
++ L ++L + + IS D F N L+ Y +C
Sbjct: 265 LLQELVTSAGLRSDVLLQTALLQVFARNSSISDAKRTFDGVRDKDLFAWNTLLTAYAQCS 324
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+ + F+ M ++N+++W AL SA N ALE M+ G KPDRV A L
Sbjct: 325 RLEQAKAAFDRMEEKNLVSWNALASAYVQNAQGDAALELLASMQLEGTKPDRVTFFASLD 384
Query: 582 AC 583
AC
Sbjct: 385 AC 386
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSC-DSLNPVEG 58
M ++N+VS+N++ SAY + + AL + M G +P + TF L +C ++ V
Sbjct: 336 MEEKNLVSWNALASAYVQNAQGDAALELLASMQLEGTKPDRVTFFASLDACFTDISQVRM 395
Query: 59 AQLQ------ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
Q S+ ++G F +D + L+ +YG+ G E VF+ M ++LV+WNSI
Sbjct: 396 LHAQISRIIHRSIAESG-FLSDVIIDNTLINMYGKCGSPREARRVFDSMRERALVSWNSI 454
Query: 113 VSIFGKHGFVEDCMFLF 129
V++ +HG V + LF
Sbjct: 455 VTVAAQHGEVAEARKLF 471
>gi|302142318|emb|CBI19521.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 159/539 (29%), Positives = 251/539 (46%), Gaps = 81/539 (15%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
QI + K+GF+ + + + ++ Y + I+ A+ +F+++ RDVVSWN +I + +
Sbjct: 179 QIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNG 238
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
ALE++++M + P Q T V ++ SC GK+IH IK+ L+ D V +
Sbjct: 239 YDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKN 298
Query: 282 ALVDFYAK---------------------------------------------CDNLEGA 296
AL YAK C N+E A
Sbjct: 299 ALTSMYAKFSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIIMCSYAGCGNIESA 358
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF 355
L ++ + +N+VS A+I GYA K + + ++LQL +P+ +L
Sbjct: 359 GLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILH----- 413
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYA---KSGLISDALAFVTALNIPRAVVPANIIA 412
G+ + ++ GS + +A K+GL +D L N +
Sbjct: 414 ------------GFTDPTFI-GSGLGIHAYGLKTGLCADCLV-------------VNGLI 447
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y++ G L S++ ++SWN VI+AC G + +ELF MR PD
Sbjct: 448 SMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAI 507
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T SLL+ CS++ L G LH + + + D F+ L+DMY KCG + S+ ++F
Sbjct: 508 TIASLLAGCSEVGFLQFGERLHNYVLRNNLDMED-FLETALVDMYIKCGRLESAERVFKS 566
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
+ + + TW +IS GL+G RAL + EM+ G KPDR+ + VL+AC HGGLV EG
Sbjct: 567 IKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEG 626
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
F M +G+ P + H C+VDLL R G L+EA + M P++ IW L C
Sbjct: 627 KRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTSC 685
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 214/456 (46%), Gaps = 58/456 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
MP R+VVS+N++I YSR GY DAL +F+ M+ GF P Q T GL+ SC + + +G
Sbjct: 219 MPRRDVVSWNALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQG 278
Query: 59 AQLQASVLKNGL-----------FCADAFVGTALLGLYGRHGCLDEVVSVFEDM------ 101
+ +K+GL F ++G YG++G DE + VF+ M
Sbjct: 279 KAIHGFGIKSGLDLDCRVKNALTSMYAKFSWNTMIGAYGQNGLFDEAMLVFKQMQKERVE 338
Query: 102 ---------------------------PRKSLVTWNSIVSIF---GKHGFVEDCMFLFCE 131
P+++LV+ +++S + G G V +C F +
Sbjct: 339 VNYVTIIMCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVEC---FTQ 395
Query: 132 LVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
+++ ++ + V ++HG ++ + G IH +K G + LV N L++MY +
Sbjct: 396 MLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGD 455
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
I + +F ++ + ++SWN++I A + A+EL+ +M + P+ T ++
Sbjct: 456 IETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAG 515
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
C+ + G+ +H V++N L+ + F+ +ALVD Y KC LE A F I + +W
Sbjct: 516 CSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATW 575
Query: 312 NALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYE 370
N +I GY S ++ E+ + G +P+ TF VL + L+ R E
Sbjct: 576 NTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMRE 635
Query: 371 NYEYVLG-----SLMTSYAKSGLISDALAFVTALNI 401
++ + G ++ +++G + +A+ FV + +
Sbjct: 636 DFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEV 671
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/525 (23%), Positives = 226/525 (43%), Gaps = 68/525 (12%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-----------DSL 53
N+ F+S+ + S A F ++ +P+ TF L+ DS
Sbjct: 112 NISVFHSLFKSCSETKDSRWAFITFRRLLESNVKPSDLTFSLLIKAYVADASSSTVIDSP 171
Query: 54 N-PVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
N +E Q+Q + K+G F ++ TA L YG+ GC+ +FE+MPR+ +V+WN++
Sbjct: 172 NTKIEANQIQTHLRKSG-FNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNAL 230
Query: 113 VSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGF 172
+ + ++G+ D + +F +++R + + VG++ + G+ IHG IK+G
Sbjct: 231 ICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGL 290
Query: 173 DYELLVANSLVNMYFQ-------------------------------------------- 188
D + V N+L +MY +
Sbjct: 291 DLDCRVKNALTSMYAKFSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIIMCSYA 350
Query: 189 -CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVY 247
C I SA ++ + R++VS +I AE N G +E + +M + P+ V
Sbjct: 351 GCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVS 410
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKN 307
+++ G IHA +K L D V + L+ Y+K ++E FSE+ K
Sbjct: 411 ILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQ 470
Query: 308 IVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHC 362
++SWN++I + ++ L ++ G+ P+ T + +L LQ LH
Sbjct: 471 LISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHN 530
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
++R + +++ +L+ Y K G + A ++ P +I+G Y +G +
Sbjct: 531 YVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISG-YGLSGHEH 589
Query: 423 ETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+ S+++ +PD +++ V++AC H G E F+ MR
Sbjct: 590 RALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMR 634
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 222/477 (46%), Gaps = 35/477 (7%)
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS-CAGLQNSILGK 262
I ++ ++++ + +E+++ A + R+ V P+ TF +I + A +S +
Sbjct: 110 IPNISVFHSLFKSCSETKDSRWAFITFRRLLESNVKPSDLTFSLLIKAYVADASSSTVID 169
Query: 263 SIHAKVIKNALECD---------VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
S + K+ N ++ V++ +A +DFY K + A F E+ +++VSWNA
Sbjct: 170 SPNTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNA 229
Query: 314 LILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMG 368
LI GY+ ++ + +++L+ G+ P + T ++ R + FQ +H I+ G
Sbjct: 230 LICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSG 289
Query: 369 YE------------NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP-ANIIAGIY 415
+ ++ +++ +Y ++GL +A+ + R V II Y
Sbjct: 290 LDLDCRVKNALTSMYAKFSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIIMCSY 349
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
G L + + + ++VS +I+ A G+ V+E F M ++ PD V
Sbjct: 350 AGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMV 409
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
S+L + + G +H KT + +D V N LI MY K G I + +F+EM +
Sbjct: 410 SILHGFTDPTFIGSGLGIHAYGLKTG-LCADCLVVNGLISMYSKFGDIETVFSLFSEMGE 468
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
+ +I+W ++ISA G A+E F +M G PD + + ++L C G ++ G L
Sbjct: 469 KQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERL 528
Query: 596 FERMNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ R+ +M+ + +VD+ ++ G L+ AE++ ++ P A W T + G
Sbjct: 529 HNYVLRN---NLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLA-TWNTMISG 581
>gi|302787184|ref|XP_002975362.1| hypothetical protein SELMODRAFT_103065 [Selaginella moellendorffii]
gi|300156936|gb|EFJ23563.1| hypothetical protein SELMODRAFT_103065 [Selaginella moellendorffii]
Length = 661
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 152/492 (30%), Positives = 252/492 (51%), Gaps = 18/492 (3%)
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ + ++VNMY +C I AE++F +E RDVV+WN ++ A A + +A +L+ M
Sbjct: 120 DIFLGTAIVNMYGKCGSIHDAEEIFFRMEHRDVVAWNAMLSAYAHNGYELEAAKLFQEME 179
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ V ++ FV ++ +C+ L + GK +H +V + E + +G ALV+ Y KC LE
Sbjct: 180 HEGVKADRVVFVSLLEACSKLGDLEQGKVVHGRVTELGFEAEDVLGHALVNLYGKCGALE 239
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F +I +KN+VSWN LI Y ++ L E+ G RP++ TF++++
Sbjct: 240 EARSLFGKIVSKNVVSWNVLITAYLQNGLVEDALKLFTEMALDGTRPDDVTFNNLVNLCT 299
Query: 354 AFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
L+ LH +I + ++M Y K+G + DA A + + R V+
Sbjct: 300 GVVSLEQARILHRRLIESEIHVDAVMRNAVMNLYVKAGSLEDARAEFYRMEV-RDVIGNT 358
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+I Y + G + + + + +E +++SW I A A NG + + L M ++P
Sbjct: 359 LITS-YGQCGNIDASRAVFTGMECKNVISWTSSIVAHATNGQASQAMGLLHQMHLEGVHP 417
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS------SDTFVCNMLIDMYGKCGSI 523
+ T + L+ AC L A+ + ++ ++S S + L++M+ KCG++
Sbjct: 418 NKVTLLGLIDACVSLA-AAVDKNERSIVIPEYVLSVASRFESTIVLETALLNMHAKCGNV 476
Query: 524 GSSVKIFNE-MTD--RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
+ +IF E M D R+ I W A++SA NG A+E F M G P V L ++L
Sbjct: 477 EEAERIFFEKMADGERDSIAWNAMVSAYATNGHGLEAIELFYGMVLQGVLPTSVTLTSIL 536
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
+ C H GLV +G+ F M +GV P DH +C+VDLL R G L+EAE +I MP +
Sbjct: 537 SGCSHAGLVGQGIRYFACMVEDHGVTPTADHMNCLVDLLGRAGWLREAEDLIRKMP-AGD 595
Query: 641 ALIWRTFLEGCQ 652
L W+ L C+
Sbjct: 596 PLTWKVLLGACR 607
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/603 (22%), Positives = 275/603 (45%), Gaps = 65/603 (10%)
Query: 3 DRNVVSFNSI------ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNP 55
DRN+ I I R G + +A R+ ++ G +F L+
Sbjct: 42 DRNLHGEQEIKDHANRIRQCGRAGDLAEAERVHAAVLRSGLGGDRFLSNLLVEMYGRCGG 101
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
VEG++ +++ +D F+GTA++ +YG+ G + + +F M + +V WN+++S
Sbjct: 102 VEGSRTAFDAIESPNVYSDIFLGTAIVNMYGKCGSIHDAEEIFFRMEHRDVVAWNAMLSA 161
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ +G+ + LF E+ V FV ++ S DLE G+ +HG V + GF+ E
Sbjct: 162 YAHNGYELEAAKLFQEMEHEGVKADRVVFVSLLEACSKLGDLEQGKVVHGRVTELGFEAE 221
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
++ ++LVN+Y +C + A +F + ++VVSWN +I A ++ AL+L+ M++
Sbjct: 222 DVLGHALVNLYGKCGALEEARSLFGKIVSKNVVSWNVLITAYLQNGLVEDALKLFTEMAL 281
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV------------------ 277
D P+ TF ++N C G+ + + +H ++I++ + D
Sbjct: 282 DGTRPDDVTFNNLVNLCTGVVSLEQARILHRRLIESEIHVDAVMRNAVMNLYVKAGSLED 341
Query: 278 ------------FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT 325
+G+ L+ Y +C N++ + F+ + KN++SW + I+ +A+ +
Sbjct: 342 ARAEFYRMEVRDVIGNTLITSYGQCGNIDASRAVFTGMECKNVISWTSSIVAHATNGQAS 401
Query: 326 SIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
L+ + L G PN+ T ++ + C+ + + E + ++ Y
Sbjct: 402 QAMGLLHQMHLEGVHPNKVTLLGLIDA----------CVSLAAAVDKNERSI--VIPEY- 448
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL----LSQLERPDIVSWN 440
++S A F + + + A++ ++ + G E ++ ++ ER D ++WN
Sbjct: 449 ---VLSVASRFESTIVLETALL------NMHAKCGNVEEAERIFFEKMADGER-DSIAWN 498
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
+++A A NG E +ELF M + P + T S+LS CS + G + +
Sbjct: 499 AMVSAYATNGHGLEAIELFYGMVLQGVLPTSVTLTSILSGCSHAGLVGQGIRYFACMVED 558
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
++ N L+D+ G+ G + + + +M + +TW L+ A L+G +R
Sbjct: 559 HGVTPTADHMNCLVDLLGRAGWLREAEDLIRKMPAGDPLTWKVLLGACRLHGDLERGTNA 618
Query: 561 FRE 563
R+
Sbjct: 619 ARK 621
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/498 (22%), Positives = 229/498 (45%), Gaps = 76/498 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M R+VV++N+++SAY+ GY +A ++F M + G + + F LL +C L +E
Sbjct: 147 MEHRDVVAWNAMLSAYAHNGYELEAAKLFQEMEHEGVKADRVVFVSLLEACSKLGDLEQG 206
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ + F A+ +G AL+ LYG+ G L+E S+F + K++V+WN +++ + ++
Sbjct: 207 KVVHGRVTELGFEAEDVLGHALVNLYGKCGALEEARSLFGKIVSKNVVSWNVLITAYLQN 266
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G VED + LF E+ + +F +++ + LE +H +I++ + ++
Sbjct: 267 GLVEDALKLFTEMALDGTRPDDVTFNNLVNLCTGVVSLEQARILHRRLIESEIHVDAVMR 326
Query: 180 NSLVNMYF------------------------------QCAGIWSAEKMFKDVEIRDVVS 209
N+++N+Y QC I ++ +F +E ++V+S
Sbjct: 327 NAVMNLYVKAGSLEDARAEFYRMEVRDVIGNTLITSYGQCGNIDASRAVFTGMECKNVIS 386
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
W + I A A + +A+ L +M ++ V PN+ T + +I++C L ++ K+ + VI
Sbjct: 387 WTSSIVAHATNGQASQAMGLLHQMHLEGVHPNKVTLLGLIDACVSLAAAV-DKNERSIVI 445
Query: 270 -------KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI---SNKNIVSWNALILGYA 319
+ E + + +AL++ +AKC N+E A F E ++ ++WNA++ YA
Sbjct: 446 PEYVLSVASRFESTIVLETALLNMHAKCGNVEEAERIFFEKMADGERDSIAWNAMVSAYA 505
Query: 320 SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
+ G E + VL+ L + L S+
Sbjct: 506 TNGH-------------GLEAIELFYGMVLQGVLPTSV-----------------TLTSI 535
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLERPD 435
++ + +GL+ + + + V P N + + R G E L+ ++ D
Sbjct: 536 LSGCSHAGLVGQGIRYFACMVEDHGVTPTADHMNCLVDLLGRAGWLREAEDLIRKMPAGD 595
Query: 436 IVSWNIVIAACAHNGDYK 453
++W +++ AC +GD +
Sbjct: 596 PLTWKVLLGACRLHGDLE 613
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 165/380 (43%), Gaps = 53/380 (13%)
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
I C + + +HA V+++ L D F+ + LV+ Y +C +EG+ F I + N+
Sbjct: 58 IRQCGRAGDLAEAERVHAAVLRSGLGGDRFLSNLLVEMYGRCGGVEGSRTAFDAIESPNV 117
Query: 309 VSWNALILGYA---------SKSSPTSIFLLIELLQ-LGYRPNEFTFSH---VLRSSLAF 355
++ + LG A S IF +E + + ++H L ++ F
Sbjct: 118 --YSDIFLGTAIVNMYGKCGSIHDAEEIFFRMEHRDVVAWNAMLSAYAHNGYELEAAKLF 175
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF---VTALNIPRAVVPANIIA 412
Q ++ G + V SL+ + +K G + VT L V + +
Sbjct: 176 QEME------HEGVKADRVVFVSLLEACSKLGDLEQGKVVHGRVTELGFEAEDVLGHALV 229
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G E L ++ ++VSWN++I A NG ++ L+LF M PD+
Sbjct: 230 NLYGKCGALEEARSLFGKIVSKNVVSWNVLITAYLQNGLVEDALKLFTEMALDGTRPDDV 289
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEI-----------------------------I 503
TF +L++ C+ + +L LH + ++EI +
Sbjct: 290 TFNNLVNLCTGVVSLEQARILHRRLIESEIHVDAVMRNAVMNLYVKAGSLEDARAEFYRM 349
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFRE 563
+ N LI YG+CG+I +S +F M +NVI+WT+ I A NG A +A+ +
Sbjct: 350 EVRDVIGNTLITSYGQCGNIDASRAVFTGMECKNVISWTSSIVAHATNGQASQAMGLLHQ 409
Query: 564 MEFLGFKPDRVALIAVLTAC 583
M G P++V L+ ++ AC
Sbjct: 410 MHLEGVHPNKVTLLGLIDAC 429
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 7/245 (2%)
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
A++ +A I+ R G+ + L + E D + I C GD E + +
Sbjct: 23 ALLEIQRLAAIH-REGKQQQDRNLHGEQEIKDHANR---IRQCGRAGDLAEAERVHAAVL 78
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ + D + +LL C GS ++ + SD F+ +++MYGKCGSI
Sbjct: 79 RSGLGGDRF-LSNLLVEMYGRCGGVEGSRTAFDAIESPNVYSDIFLGTAIVNMYGKCGSI 137
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ +IF M R+V+ W A++SA NG+ A + F+EME G K DRV +++L AC
Sbjct: 138 HDAEEIFFRMEHRDVVAWNAMLSAYAHNGYELEAAKLFQEMEHEGVKADRVVFVSLLEAC 197
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
G + +G + R+ G E E H +V+L + G L+EA + + N +
Sbjct: 198 SKLGDLEQGKVVHGRVTE-LGFEAEDVLGHALVNLYGKCGALEEARSLFGKI-VSKNVVS 255
Query: 644 WRTFL 648
W +
Sbjct: 256 WNVLI 260
>gi|297800206|ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297313823|gb|EFH44246.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 616
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 157/540 (29%), Positives = 263/540 (48%), Gaps = 43/540 (7%)
Query: 53 LNPVEGAQLQASVLKNGLFCADA---FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
L G +L + L C D + G L+ R G L VF+ MP ++ VTW
Sbjct: 92 LQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPDRNTVTW 151
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALT-ESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
+++ + K G ++ LF + V+ + T E FV +++ S + E G Q+HG ++
Sbjct: 152 TAMIDGYLKFGLEDEAFSLFEDYVKHGIRFTNERMFVCLLNLCSRRSEFELGRQVHGNMV 211
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
K G L+V +SLV Y QC + SA + F +E +DV+SW +I A + + KA+
Sbjct: 212 KVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGNKAIF 270
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
+++ M PN+ T ++ +C+ + G+ +H+ V+K ++ DVFVG++L+D YA
Sbjct: 271 MFIGMLNHGFLPNEFTVCSILKACSEEKAIRFGRQVHSLVVKRMIKTDVFVGTSLMDMYA 330
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR-PNEFTFSH 347
KC + F +SN+N V+W ++I +A + L +++ + N T
Sbjct: 331 KCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRVMKRRHLIANNLTVVS 390
Query: 348 VLRS--SLAFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
+LR+ S+ LL +LH II+ E Y+ +L+ Y K G DA
Sbjct: 391 ILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAF---------- 440
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+L QL D+VSW +I+ C+ G E L+ K M
Sbjct: 441 ----------------------NVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMI 478
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ P+ +T+ S L AC+ +L +G S+H + KK + S+ FV + LI MY KCG +
Sbjct: 479 QEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL-SNVFVGSALIHMYAKCGFV 537
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+ ++F+ M ++N+++W A+I NGF + AL+ ME GF+ D +L+ C
Sbjct: 538 SEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 242/493 (49%), Gaps = 44/493 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPT-QFTFGGLLS-CDSLNPVE- 57
MPDRN V++ ++I Y + G ++A +F + G T + F LL+ C + E
Sbjct: 143 MPDRNTVTWTAMIDGYLKFGLEDEAFSLFEDYVKHGIRFTNERMFVCLLNLCSRRSEFEL 202
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ +++K G+ + V ++L+ Y + G L + F+ M K +++W +++S
Sbjct: 203 GRQVHGNMVKVGV--GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACS 260
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G +F+F ++ E + ++ S E+ + FG Q+H LV+K ++
Sbjct: 261 RKGHGNKAIFMFIGMLNHGFLPNEFTVCSILKACSEEKAIRFGRQVHSLVVKRMIKTDVF 320
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGK-ALELYLRMSVD 236
V SL++MY +C I K+F + R+ V+W +II A A E FG+ A+ L+ M
Sbjct: 321 VGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAR-EGFGEEAISLFRVMKRR 379
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ N T V ++ +C + +LGK +HA++IKN++E +V++GS LV Y KC A
Sbjct: 380 HLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDA 439
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
++ ++++VSW A+I G +S + ++ L E++Q G PN FT+S L++
Sbjct: 440 FNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANS 499
Query: 356 QLLQLHCLIIRMGYENYE----YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ L + I + +N+ +V +L+ YAK G +S+A
Sbjct: 500 ESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAF------------------ 541
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++ + ++VSW +I A NG +E L+L M A D+
Sbjct: 542 --------------RVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDD 587
Query: 472 YTFVSLLSACSKL 484
Y F ++LS C +
Sbjct: 588 YIFATILSTCGDI 600
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 183/391 (46%), Gaps = 32/391 (8%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
K IHA +K + ++ G+ L+ + +L A F + ++N V+W A+I GY
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPDRNTVTWTAMIDGY--- 158
Query: 322 SSPTSIFLLIELLQLGYRPNEFT-FSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLM 380
L+ G F+ F ++ + F ++ ++ + E+ LG +
Sbjct: 159 ------------LKFGLEDEAFSLFEDYVKHGIRFTNERMFVCLLNLCSRRSEFELGRQV 206
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
+ + + +V ++++ Y + G+ ++ +E D++SW
Sbjct: 207 HGN------------MVKVGVGNLIVESSLVY-FYAQCGELTSALRAFDMMEEKDVISWT 253
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
VI+AC+ G + + +F M P+ +T S+L ACS+ + G +H L+ K
Sbjct: 254 AVISACSRKGHGNKAIFMFIGMLNHGFLPNEFTVCSILKACSEEKAIRFGRQVHSLVVK- 312
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
+I +D FV L+DMY KCG I K+F+ M++RN +TWT++I+A GF + A+
Sbjct: 313 RMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISL 372
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
FR M+ + + ++++L AC G + G EL ++ ++ +E + +V L
Sbjct: 373 FRVMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYC 431
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ G ++A ++ +P + + W + GC
Sbjct: 432 KCGESRDAFNVLQQLP-SRDVVSWTAMISGC 461
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 133/258 (51%), Gaps = 3/258 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M +RN V++ SII+A++R G+ E+A+ +F M R T +L +C S+ + G
Sbjct: 345 MSNRNTVTWTSIIAAHAREGFGEEAISLFRVMKRRHLIANNLTVVSILRACGSVGALLLG 404
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+L A ++KN + + ++G+ L+ LY + G + +V + +P + +V+W +++S
Sbjct: 405 KELHAQIIKNSIE-KNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSS 463
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + E+++ V ++ + +N + L G IH + KN + V
Sbjct: 464 LGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFV 523
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
++L++MY +C + A ++F + +++VSW +I A + +AL+L RM +
Sbjct: 524 GSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGF 583
Query: 239 FPNQTTFVYVINSCAGLQ 256
+ F ++++C ++
Sbjct: 584 EVDDYIFATILSTCGDIE 601
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 142/462 (30%), Positives = 232/462 (50%), Gaps = 30/462 (6%)
Query: 192 IWSAEKMFKDVEIRDVVSWNTIIGALAESEN-FGKALELYLRMSVDIVFPNQTTFVYVIN 250
+W A + V +N II +L+ S N F LY +M + + P+ T Y++
Sbjct: 87 LWYASSLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLK 146
Query: 251 SCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVS 310
+C+ I IHA IK L ++FV + L+ FYA +E F + + +++S
Sbjct: 147 ACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLIS 206
Query: 311 WNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYE 370
W LI Y+ P+ + ++ + T VL + ++G
Sbjct: 207 WTTLIQAYSKMGYPSEA--IAAFFRMNCTADRMTLVVVLSAC------------SQLG-- 250
Query: 371 NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQ 430
++ LG + +Y L ++ V N + +Y + GQ + +L
Sbjct: 251 --DFTLGKKILAYMDHHL----------FDVHSDVFLGNALLDMYLKCGQPHLARQLFHL 298
Query: 431 LERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALG 490
+ ++VSWN +I+ AH G +KE L +F+ M+ + PD+ T V +L++C+ L +L LG
Sbjct: 299 MPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELG 358
Query: 491 SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGL 550
+H I K + +D +V N L+DMY KCGSI + +F M ++V ++TA+I +
Sbjct: 359 KWVHSYIDKNHM-KADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAM 417
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMD 610
+G A RAL F EM +G +PD V L+ VL+AC H GL+ EG F+ M+R Y ++P+ +
Sbjct: 418 HGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTE 477
Query: 611 HYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
HY C+VDLL R G + EAE MP P+A +W + L C+
Sbjct: 478 HYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACK 519
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 210/419 (50%), Gaps = 20/419 (4%)
Query: 9 FNSIISAYSRCGYV-EDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNP-VEGAQLQASV 65
FN+II + S ++ M+ G P +T LL +C + +E Q+ A
Sbjct: 105 FNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHS 164
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
+K GL ++ FV L+ Y G ++ V VF+ P L++W +++ + K G+ +
Sbjct: 165 IKTGL-SSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEA 223
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY--ELLVANSLV 183
+ F R + V V+ S D G++I + + FD ++ + N+L+
Sbjct: 224 IAAF---FRMNCTADRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALL 280
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
+MY +C A ++F + ++++VSWN++I LA F +AL ++ RM + P+
Sbjct: 281 DMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSV 340
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
T V V+NSCA L + LGK +H+ + KN ++ D +V +ALVD YAKC +++ A + F +
Sbjct: 341 TLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAM 400
Query: 304 SNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL---- 358
K++ S+ A+I+G+A + ++ + E+ ++G RP+ T VL + LL
Sbjct: 401 KCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGR 460
Query: 359 ---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PRAVVPANIIAG 413
Q + + + Y G ++ ++GLIS+A AF + I P A V +++
Sbjct: 461 RHFQDMSRLYHLQPQTEHY--GCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGA 517
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 132/259 (50%), Gaps = 8/259 (3%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQ 60
P +++S+ ++I AYS+ GY +A+ F M + T +LS C L +
Sbjct: 200 PHWDLISWTTLIQAYSKMGYPSEAIAAFFRM---NCTADRMTLVVVLSACSQLGDFTLGK 256
Query: 61 LQASVLKNGLF--CADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + + LF +D F+G ALL +Y + G +F MP K+LV+WNS++S
Sbjct: 257 KILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAH 316
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ + +F + + + VGV++ +N DLE G+ +H + KN + V
Sbjct: 317 QGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYV 376
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
AN+LV+MY +C I A +F+ ++ +DV S+ +I A +AL ++ M V
Sbjct: 377 ANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGV 436
Query: 239 FPNQTTFVYVINSC--AGL 255
P+ T V V+++C AGL
Sbjct: 437 RPDHVTLVGVLSACSHAGL 455
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
MP +N+VS+NS+IS + G ++AL MF M G +P T G+L SC +L +E
Sbjct: 299 MPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELG 358
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ S + AD +V AL+ +Y + G +D+ VF+ M K + ++ +++ F H
Sbjct: 359 KWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMH 418
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQ 162
G + + +F E+ R V + VGV+ S+ LE G +
Sbjct: 419 GKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRR 461
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 239/471 (50%), Gaps = 24/471 (5%)
Query: 197 KMFKDVEIRDVVSWNTIIGALAESENFGKALELY---LRMSVDIVFPNQTTFVYVINSCA 253
K+ K +E ++ SWN I +ESEN ++ LY LR P+ T+ + CA
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
L+ S LG I V+K LE V +A + +A C ++E A F E +++VSWN
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNC 227
Query: 314 LILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY 372
LI GY + +L++ G +P++ T ++ S L G E Y
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLN-------RGKEFY 280
Query: 373 EYV-----------LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
EYV + +LM ++K G I +A L V +I+G Y R G
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISG-YARCGLL 339
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
+ + KL +E D+V WN +I ++ L LF+ M+ + PD T + LSAC
Sbjct: 340 DVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSAC 399
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
S+L L +G +H I+K + S + + L+DMY KCG+I ++ +F+ + RN +T+
Sbjct: 400 SQLGALDVGIWIHRYIEKYSL-SLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTY 458
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
TA+I L L+G A A+ F EM G PD + I +L+AC HGG+++ G + F +M
Sbjct: 459 TAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKS 518
Query: 602 SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ + P++ HY +VDLL R G L+EA++++ +MP +A +W L GC+
Sbjct: 519 RFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCR 569
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 139/623 (22%), Positives = 253/623 (40%), Gaps = 90/623 (14%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGL--YGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+QA ++ NGL D F + L+ LD V + + + ++ +WN + F
Sbjct: 71 QIQAQMIINGLIL-DPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFS 129
Query: 118 KHGFVEDCMFLFCELVRS---EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ ++ L+ +++R E ++ + ++ + G I G V+K +
Sbjct: 130 ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLEL 189
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V N+ ++M+ C + +A K+F + +RD+VSWN +I + KA+ +Y M
Sbjct: 190 VSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLME 249
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ V P+ T + +++SC+ L + GK + V +N L + + +AL+D ++KC ++
Sbjct: 250 SEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIH 309
Query: 295 GAHLCFSEISNKNIVSWNALILGYA--------------------------------SKS 322
A F + + IVSW +I GYA +K
Sbjct: 310 EARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKR 369
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLG----- 377
++ L E+ +P+E T H L + L + I R E Y L
Sbjct: 370 GQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY-IEKYSLSLNVALGT 428
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
SL+ YAK G IS+AL+ + GI R +
Sbjct: 429 SLVDMYAKCGNISEALS---------------VFHGIQTRNS-----------------L 456
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
++ +I A +GD + F M A I PD TF+ LLSAC + G +
Sbjct: 457 TYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQM 516
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---F 553
K ++ ++++D+ G+ G + + ++ M + + W AL+ ++G
Sbjct: 517 KSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVEL 576
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP-----E 608
++A +K E++ P + +L + E + RM GVE
Sbjct: 577 GEKAAKKLLELD-----PSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSS 631
Query: 609 MDHYHCVVDLLVRYGHLKEAEKI 631
++ V + +VR E+EKI
Sbjct: 632 IEVNGIVCEFIVRDKSRPESEKI 654
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 122/236 (51%), Gaps = 10/236 (4%)
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM---RAARIYPDNYTFVSLLSA 480
+VK+L +E P+I SWN+ I + + + KE L+K M PD++T+ L
Sbjct: 106 SVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKV 165
Query: 481 CSKLCNLALGSSL--HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
C+ L +LG + H L + E++S V N I M+ CG + ++ K+F+E R++
Sbjct: 166 CADLRLSSLGHMILGHVLKLRLELVS---HVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
++W LI+ G A++A+ ++ ME G KPD V +I ++++C G + G E +E
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC 654
+ + G+ + + ++D+ + G + EA +I + + W T + G RC
Sbjct: 283 VKEN-GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE-KRTIVSWTTMISGYARC 336
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 36/285 (12%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGA 59
P R++VS+N +I+ Y + G E A+ ++ M + G +P T GL+ SC L + G
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 60 QLQASVLKNGLF---------------CADAFVG---------------TALLGLYGRHG 89
+ V +NGL C D T ++ Y R G
Sbjct: 278 EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCG 337
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIV--SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGV 147
LD +F+DM K +V WN+++ S+ K G +D + LF E+ S E + +
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRG--QDALALFQEMQTSNTKPDEITMIHC 395
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
+ S L+ G IH + K + + SLV+MY +C I A +F ++ R+
Sbjct: 396 LSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNS 455
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
+++ IIG LA + A+ + M + P++ TF+ ++++C
Sbjct: 456 LTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSAC 500
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 14/176 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M +++VV +N++I + +DAL +F M +P + T LS C L ++ G
Sbjct: 349 MEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG 408
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + K L + +GT+L+ +Y + G + E +SVF + ++ +T+ +I+
Sbjct: 409 IWIHRYIEKYSL-SLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLAL 467
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
HG + F E++ + +A E +F+G++ HG +I+ G DY
Sbjct: 468 HGDASTAISYFNEMIDAGIAPDEITFIGLLSAC-----------CHGGMIQTGRDY 512
>gi|356507622|ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Glycine max]
Length = 698
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 281/581 (48%), Gaps = 20/581 (3%)
Query: 85 YGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
Y + CL + +F++MP+ +WN++++ + + GF + LF + RS TE +F
Sbjct: 107 YAKCHCLRDARELFDEMPQPDGGSWNALITAYSQLGFPNETFSLFLCMTRSGFFPTEVTF 166
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
V+ + +L +Q+HGLV K GF +++ +SLV++Y +C + A +MF ++
Sbjct: 167 ASVLASCAASSELLLSKQVHGLVTKFGFCGNVILGSSLVDVYGKCGVMADARRMFHEIPQ 226
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
+ V+WN I+ ++ + +A+ ++ RM S V P TF + +C+ + G
Sbjct: 227 PNAVTWNVIVRRYLDAGDAKEAVFMFSRMFSTSAVRPMNFTFSNALVACSSVSALREGVQ 286
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA--SK 321
IH V+K L D V S+LV+ Y KC LE F ++ +++V W +++ GYA K
Sbjct: 287 IHGVVVKLGLREDNVVSSSLVNMYVKCGRLEDGFQVFDQLGFRDLVCWTSIVSGYAMSGK 346
Query: 322 SSPTSIFL--LIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
+ F + E + + ++ S A + L +I+ + ++V L
Sbjct: 347 TLEAREFFDEMPERNVISWNAMLAGYTQCSEWSKALDFVYLMLDVIK----DVDHVTLGL 402
Query: 380 MTSYAKSGLISD------ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL-E 432
+ + S ISD ++ + +N + +Y + G N T +Q+ +
Sbjct: 403 LLNV--SAGISDHEMGKQVHGYIYRHGFHSDLRLSNALLDMYGKCGNLNSTRVWFNQMSD 460
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
R D VSWN ++A+ + ++ L +F M+ P YTFV+LL AC+ L LG
Sbjct: 461 RRDRVSWNALLASYGQHQLSEQALTMFSKMQW-ETKPTQYTFVTLLLACANTFTLCLGKQ 519
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+HG + + DT L+ MY KC + ++++ R+VI W +I N
Sbjct: 520 IHGFMIR-HGFHIDTVTRTALVYMYCKCRCLEYAIEVLKRAVSRDVIIWNTIIMGCVHNH 578
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY 612
+ ALE F ME G KPD V +L AC GLV G F+ M+ + V P M+HY
Sbjct: 579 KGKEALELFVIMEAEGIKPDHVTFKGILLACIEEGLVEFGTGCFKSMSSEFHVLPRMEHY 638
Query: 613 HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
C+++L R+ ++ E E + TM P + + L+ CQ+
Sbjct: 639 DCMIELYSRHRYMDELENFMRTMTMEPTLPMLKRVLDVCQK 679
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 244/520 (46%), Gaps = 72/520 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP + S+N++I+AYS+ G+ + +FL M GF PT+ TF +L SC + + +
Sbjct: 123 MPQPDGGSWNALITAYSQLGFPNETFSLFLCMTRSGFFPTEVTFASVLASCAASSELLLS 182
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ V K G FC + +G++L+ +YG+ G + + +F ++P+ + VTWN IV +
Sbjct: 183 KQVHGLVTKFG-FCGNVILGSSLVDVYGKCGVMADARRMFHEIPQPNAVTWNVIVRRYLD 241
Query: 119 HGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G ++ +F+F + S V +F + S+ L G QIHG+V+K G + +
Sbjct: 242 AGDAKEAVFMFSRMFSTSAVRPMNFTFSNALVACSSVSALREGVQIHGVVVKLGLREDNV 301
Query: 178 VANSLVNMYFQCAGI-----------------WS--------------AEKMFKDVEIRD 206
V++SLVNMY +C + W+ A + F ++ R+
Sbjct: 302 VSSSLVNMYVKCGRLEDGFQVFDQLGFRDLVCWTSIVSGYAMSGKTLEAREFFDEMPERN 361
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
V+SWN ++ + + KAL+ M I + T ++N AG+ + +GK +H
Sbjct: 362 VISWNAMLAGYTQCSEWSKALDFVYLMLDVIKDVDHVTLGLLLNVSAGISDHEMGKQVHG 421
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN-KNIVSWNALILGYASKSSPT 325
+ ++ D+ + +AL+D Y KC NL + F+++S+ ++ VSWNAL+ Y
Sbjct: 422 YIYRHGFHSDLRLSNALLDMYGKCGNLNSTRVWFNQMSDRRDRVSWNALLASYGQHQLSE 481
Query: 326 SIFLLIELLQLGYRPNEFTF-SHVLRSSLAFQLL---QLHCLIIRMGYENYEYVLGSLMT 381
+ +Q +P ++TF + +L + F L Q+H +IR G+ +L+
Sbjct: 482 QALTMFSKMQWETKPTQYTFVTLLLACANTFTLCLGKQIHGFMIRHGFHIDTVTRTALVY 541
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
Y K + A +++L + D++ WN
Sbjct: 542 MYCKCRCLEYA--------------------------------IEVLKRAVSRDVIIWNT 569
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
+I C HN KE LELF M A I PD+ TF +L AC
Sbjct: 570 IIMGCVHNHKGKEALELFVIMEAEGIKPDHVTFKGILLAC 609
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 211/434 (48%), Gaps = 21/434 (4%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N + Y +C + A ++F ++ D SWN +I A ++ + L+L M+ F
Sbjct: 101 NRAIEAYAKCHCLRDARELFDEMPQPDGGSWNALITAYSQLGFPNETFSLFLCMTRSGFF 160
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P + TF V+ SCA +L K +H V K +V +GS+LVD Y KC + A
Sbjct: 161 PTEVTFASVLASCAASSELLLSKQVHGLVTKFGFCGNVILGSSLVDVYGKCGVMADARRM 220
Query: 300 FSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQL 357
F EI N V+WN ++ Y + + ++F+ + RP FTFS+ L + +
Sbjct: 221 FHEIPQPNAVTWNVIVRRYLDAGDAKEAVFMFSRMFSTSAVRPMNFTFSNALVACSSVSA 280
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L Q+H +++++G V SL+ Y K G + D L V +I++G
Sbjct: 281 LREGVQIHGVVVKLGLREDNVVSSSLVNMYVKCGRLEDGFQVFDQLGFRDLVCWTSIVSG 340
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
Y +G+ E + ++ +++SWN ++A ++ + L+ M D+ T
Sbjct: 341 -YAMSGKTLEAREFFDEMPERNVISWNAMLAGYTQCSEWSKALDFVYLMLDVIKDVDHVT 399
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
LL+ + + + +G +HG I + SD + N L+DMYGKCG++ S+ FN+M
Sbjct: 400 LGLLLNVSAGISDHEMGKQVHGYIYR-HGFHSDLRLSNALLDMYGKCGNLNSTRVWFNQM 458
Query: 534 TD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-------- 584
+D R+ ++W AL+++ G + +++AL F +M++ KP + + +L AC
Sbjct: 459 SDRRDRVSWNALLASYGQHQLSEQALTMFSKMQW-ETKPTQYTFVTLLLACANTFTLCLG 517
Query: 585 ---HGGLVREGMEL 595
HG ++R G +
Sbjct: 518 KQIHGFMIRHGFHI 531
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 170/369 (46%), Gaps = 55/369 (14%)
Query: 231 LRMSVDIVFPNQTTFVYVINS-----CAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
+R + I+F F + + + C+ + + + + + ++ + F+ + ++
Sbjct: 46 IRKATSILFAFPKPFPFSLYALFFRLCSSHRAVVEARKVESHLLTFSPNPPTFLLNRAIE 105
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFT 344
YAKC L A F E+ + SWNALI Y+ P F L + + + G+ P E T
Sbjct: 106 AYAKCHCLRDARELFDEMPQPDGGSWNALITAYSQLGFPNETFSLFLCMTRSGFFPTEVT 165
Query: 345 FSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
F+ VL S A L Q+H L+ + G+ + SL+ Y K G+++DA
Sbjct: 166 FASVLASCAASSELLLSKQVHGLVTKFGFCGNVILGSSLVDVYGKCGVMADAR------- 218
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
++ ++ +P+ V+WN+++ GD KE + +F
Sbjct: 219 -------------------------RMFHEIPQPNAVTWNVIVRRYLDAGDAKEAVFMFS 253
Query: 461 YM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
M + + P N+TF + L ACS + L G +HG++ K + D V + L++MY K
Sbjct: 254 RMFSTSAVRPMNFTFSNALVACSSVSALREGVQIHGVVVKLG-LREDNVVSSSLVNMYVK 312
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR-----V 574
CG + ++F+++ R+++ WT+++S ++G A E F EM P+R
Sbjct: 313 CGRLEDGFQVFDQLGFRDLVCWTSIVSGYAMSGKTLEAREFFDEM------PERNVISWN 366
Query: 575 ALIAVLTAC 583
A++A T C
Sbjct: 367 AMLAGYTQC 375
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 25/204 (12%)
Query: 458 LFKYMRAARI---------YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS---- 504
+ Y++A RI +P + F SL + +LC SS +++ ++ S
Sbjct: 37 ILTYLKAGRIRKATSILFAFPKPFPF-SLYALFFRLC-----SSHRAVVEARKVESHLLT 90
Query: 505 ----SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
TF+ N I+ Y KC + + ++F+EM + +W ALI+A GF
Sbjct: 91 FSPNPPTFLLNRAIEAYAKCHCLRDARELFDEMPQPDGGSWNALITAYSQLGFPNETFSL 150
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
F M GF P V +VL +C + ++ + + +G + +VD+
Sbjct: 151 FLCMTRSGFFPTEVTFASVLASCAASSELLLSKQVHGLVTK-FGFCGNVILGSSLVDVYG 209
Query: 621 RYGHLKEAEKIITTMPFPPNALIW 644
+ G + +A ++ +P PNA+ W
Sbjct: 210 KCGVMADARRMFHEIP-QPNAVTW 232
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 161/539 (29%), Positives = 266/539 (49%), Gaps = 57/539 (10%)
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
S+ + E +H +IKNG + N L+N+Y + + A KMF+++ DV SW
Sbjct: 298 FSDSMNYPNSEVLHAKLIKNGCVG--IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSW 355
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG-LQNSILGKSIHAKVI 269
+I A L L+ +M V PNQ T V+ SC+ + +S +GK IH ++
Sbjct: 356 TVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWIL 415
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI-----LGYASKS-- 322
+N L+ D + ++++D+Y KC A F ++ K+ VSWN ++ +G KS
Sbjct: 416 RNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVD 475
Query: 323 -------------------------SPTSIFLLIELLQLGYRPNEFTFS--HVLRSSLAF 355
++ LL +++ G N+ TFS VL SSL+
Sbjct: 476 LFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSV 535
Query: 356 QLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L Q+H ++++G + +V SL+ Y K G + A V ++P+ +
Sbjct: 536 LGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKA--SVIFKHLPQE-------SS 586
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+ N ++ V + VSW+ +++ NG +++ L+ F +M +++ D +T
Sbjct: 587 MMNSEESCDDAV--------VESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFT 638
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
S++SAC+ L LG +HG I+K D F+ + +IDMY KCGS+ + IFN+
Sbjct: 639 LTSVVSACASAGVLELGRQVHGYIQKIGH-GLDVFLGSSIIDMYVKCGSLNDAWLIFNQA 697
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
DRNV+ WT++IS L+G + A+ F M G P+ V+ + VLTAC H GL+ EG
Sbjct: 698 KDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGC 757
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F M YG+ P +H+ C+VDL R G L E ++ I + +WR+FL C+
Sbjct: 758 KYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCR 816
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 135/570 (23%), Positives = 254/570 (44%), Gaps = 101/570 (17%)
Query: 37 FEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS 96
F P F S DS+N L A ++KNG C G LL LY + L++
Sbjct: 287 FYPPLXYFSSTFS-DSMNYPNSEVLHAKLIKNG--CV-GIRGNHLLNLYAKSQNLEQAHK 342
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL-SNEQ 155
+FE++P+ + +W ++S F + G D + LF ++ V + + V+ SN
Sbjct: 343 MFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVN 402
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
D G+ IHG +++NG D + ++ NS+++ Y +C AEK+F + +D VSWN ++
Sbjct: 403 DSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMS 462
Query: 216 ALAESENFGKALELYL-----------------------RMSVDIVFP--------NQTT 244
+ + + K+++L+ R+++++++ N+ T
Sbjct: 463 SYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLT 522
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
F + + L LGK IH +V+K + D FV ++L+D Y KC +E A + F +
Sbjct: 523 FSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLP 582
Query: 305 NKN---------------IVSWNALILGYASKSS-----PTSIFLLIELLQLGYRPNEFT 344
++ VSW++++ GY T F++ +++ ++FT
Sbjct: 583 QESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEV----DKFT 638
Query: 345 FSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
+ V+ + + +L Q+H I ++G+ ++ S++ Y K G ++DA
Sbjct: 639 LTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWL------ 692
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
I+N+ N +V W +I+ CA +G +E + LF+
Sbjct: 693 -------------IFNQAKDRN-------------VVLWTSMISGCALHGQGREAVRLFE 726
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYG 518
M I P+ +FV +L+ACS L G L+++ I ++ F C ++D+YG
Sbjct: 727 LMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTC--MVDLYG 784
Query: 519 KCGSIGSSVK-IFNEMTDRNVITWTALISA 547
+ G + + I N + W + +S+
Sbjct: 785 RAGRLNEIKEFIHNNAISKLSSVWRSFLSS 814
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 143/603 (23%), Positives = 252/603 (41%), Gaps = 90/603 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
+P +V S+ +IS ++R G D L +F M ++G P QFT +L S N +
Sbjct: 347 IPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRI 406
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGC--------------------------- 90
G + +L+NGL DA + ++L Y + C
Sbjct: 407 GKGIHGWILRNGLDL-DAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYL 465
Query: 91 ----LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVG 146
+ + V +F +P K +WN+++ ++G + L ++V + A + +F
Sbjct: 466 QIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSI 525
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK------ 200
+ S+ L G+QIH V+K G + V NSL++MY +C + A +FK
Sbjct: 526 ALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQES 585
Query: 201 ---------DVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
D + + VSW++++ ++ F AL+ + M V ++ T V+++
Sbjct: 586 SMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSA 645
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
CA LG+ +H + K DVF+GS+++D Y KC +L A L F++ ++N+V W
Sbjct: 646 CASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLW 705
Query: 312 NALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYE 370
++I G A L EL+ G PNE +F VL + LL+ C R+ E
Sbjct: 706 TSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMRE 765
Query: 371 NYEYVLGS-----LMTSYAKSGLISDALAFVTALNIPR-----------AVVPANIIAGI 414
Y G+ ++ Y ++G +++ F+ I + V NI GI
Sbjct: 766 VYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGI 825
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM--RAARIYPDNY 472
+ K L +LE D + + + CA ++E ++ M R + P
Sbjct: 826 W--------VCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQS 877
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
+ L + +H + DT + + L ++ G+ IG S +
Sbjct: 878 W-------------IQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPV 924
Query: 533 MTD 535
M D
Sbjct: 925 MQD 927
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/527 (28%), Positives = 253/527 (48%), Gaps = 53/527 (10%)
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
+N F + NSL+++Y + + A +F ++ RD VSW +I L S F A++
Sbjct: 279 RNAFTW-----NSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVK 333
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
+L M + P+Q T V++SCA ++ +G+ +H V+K L V V ++++ Y
Sbjct: 334 TFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYG 393
Query: 289 KCDNLEGAHLCFSEIS-------------------------------NKNIVSWNALILG 317
KC + E A F + ++IVSWN +I G
Sbjct: 394 KCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAG 453
Query: 318 YASK--SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYEN 371
Y F L P+ FT + VL + ++L Q+H I+R G
Sbjct: 454 YNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPC 513
Query: 372 YEYVLGSLMTSYAKSGLISDAL-----AFVTALNIPRAVVPANIIAGIYNRTGQYNETVK 426
++ +L+++YAKSG + A A V LN V+ + Y + G + +
Sbjct: 514 SSQIMNALISTYAKSGSVETARRIMDQAVVADLN----VISFTALLEGYVKLGDTKQARE 569
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+ + D+++W +I NG E +ELF+ M P+++T ++LSAC+ L
Sbjct: 570 IFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAY 629
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN-VITWTALI 545
L G +H ++ + V N +I +Y + GS+ + ++F+++ R ITWT++I
Sbjct: 630 LDYGKQIHCKAIRS-LQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMI 688
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
A+ +G ++A+ F EM +G KPD + + VL+AC H G V +G +E+M +G+
Sbjct: 689 VAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGI 748
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
P+M HY C+VDL R G L EA + I MP P+ ++W + L C+
Sbjct: 749 VPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACR 795
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 147/681 (21%), Positives = 273/681 (40%), Gaps = 163/681 (23%)
Query: 52 SLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGR----HGCLDEVVSVFEDMP--RKS 105
++NP G + A +K GL + ++ LL Y GC E +F+D+P R++
Sbjct: 222 AVNPSAGRAIHAHAVKAGLLVS-TYLCNNLLAYYASVGVSRGCFREARCLFDDIPYARRN 280
Query: 106 LVTWNSIVSIFGKHGFVEDCMFLFCE-------------------------------LVR 134
TWNS++S++ K G + D +F E +V
Sbjct: 281 AFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVS 340
Query: 135 SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS 194
A ++ + V+ + + G ++H V+K G + VANS++ MY +C +
Sbjct: 341 EGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAET 400
Query: 195 AEKMFKDVEIRDV-------------------------------VSWNTIIGALAESENF 223
A +F+ +++R V VSWNTII ++
Sbjct: 401 ARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLD 460
Query: 224 GKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSA 282
G AL+ + RM S + P+ T V+++CA L+ +GK +H+ +++ + C + +A
Sbjct: 461 GMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNA 520
Query: 283 LVDFYAKCDNLEGAHL---------------------------------CFSEISNKNIV 309
L+ YAK ++E A F ++N++++
Sbjct: 521 LISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVI 580
Query: 310 SWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLI 364
+W A+I+GY + + ++ L ++ +G PN T + VL + + L Q+HC
Sbjct: 581 AWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKA 640
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
IR E V +++T YA+SG + A + + + + + G +
Sbjct: 641 IRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQA 700
Query: 425 VKLLSQLER----PDIVSWNIVIAACAHNG------DYKEVL------------------ 456
V L ++ R PD +++ V++ACAH G Y E +
Sbjct: 701 VVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVD 760
Query: 457 ---------ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
E ++++ + PD + SLL+AC N L G + + +S
Sbjct: 761 LHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGA 820
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV-----ITWTALISALGLNG---------- 552
+ + L ++Y CG + +I+ D+ V +WT + + + G
Sbjct: 821 Y--SALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRD 878
Query: 553 -FAQRALEKFREMEFLGFKPD 572
++A E + E++ GF PD
Sbjct: 879 SIYRKAAEMWEEIKKAGFVPD 899
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 206/480 (42%), Gaps = 79/480 (16%)
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNAL---------------------------EC-- 275
+ ++ C N G++IHA +K L C
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271
Query: 276 --------DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTS 326
+ F ++L+ YAK L AH+ F+E+ +++ VSW +I+G S +
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDA 331
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQL----LQLHCLIIRMGYENYEYVLGSLMTS 382
+ ++++ G+ P++FT ++VL S A + ++H ++++G + V S++
Sbjct: 332 VKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYM 391
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
Y K G A A + + R+V N++ +Y G+ V + + IVSWN +
Sbjct: 392 YGKCGDAETARAVFERMQV-RSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTI 450
Query: 443 IAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
IA NG L+ F M A+ + PD +T S+LSAC+ L L +G +H I +T
Sbjct: 451 IAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTG 510
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVK--------------------------------- 528
+ S + N LI Y K GS+ ++ +
Sbjct: 511 MPCSSQ-IMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQARE 569
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
IF+ M +R+VI WTA+I NG A+E FR M +G +P+ L AVL+AC
Sbjct: 570 IFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAY 629
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ G ++ + RS E + + ++ + R G + A ++ + + + W + +
Sbjct: 630 LDYGKQIHCKAIRSLQ-EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMI 688
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 167/353 (47%), Gaps = 38/353 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLLS-CDSLNPVE- 57
M +R++VS+N+II+ Y++ G AL+ F M++ EP FT +LS C +L ++
Sbjct: 439 MVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKM 498
Query: 58 GAQLQASVLKNGLFCADAFVG--------------------------------TALLGLY 85
G Q+ + +L+ G+ C+ + TALL Y
Sbjct: 499 GKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGY 558
Query: 86 GRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFV 145
+ G + +F+ M + ++ W +++ + ++G ++ M LF ++ +
Sbjct: 559 VKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLA 618
Query: 146 GVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR 205
V+ ++ L++G+QIH I++ + + V+N+++ +Y + + A ++F + R
Sbjct: 619 AVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWR 678
Query: 206 -DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+ ++W ++I A+A+ +A+ L+ M V P+ T+V V+++CA GK
Sbjct: 679 KETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRY 738
Query: 265 HAKVI-KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS-NKNIVSWNALI 315
+ ++ ++ + + + +VD +A+ L AH + + V W +L+
Sbjct: 739 YEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLL 791
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 158/572 (27%), Positives = 273/572 (47%), Gaps = 74/572 (12%)
Query: 153 NEQDLEFGEQ-IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
N+ + F Q +H VIK+G + + + N+L+N+Y + A K+F ++ +R SWN
Sbjct: 25 NKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWN 84
Query: 212 TIIGALAES----------------------------ENFG---KALELYLRMSVDIVFP 240
T++ A A+ +N G KA+ + M + + P
Sbjct: 85 TVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEP 144
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN-------- 292
+Q T V+ S A + GK +H+ ++K L +V V ++L++ YAKC +
Sbjct: 145 SQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVF 204
Query: 293 -----------------------LEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIF 328
++ A F +++ ++IV+WN++I GY + ++
Sbjct: 205 DRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALD 264
Query: 329 LLIELLQLGY-RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSY 383
+ ++L+ P+ FT + VL + + L Q+H I+ G++ VL +L++ Y
Sbjct: 265 MFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMY 324
Query: 384 AKSGLISDALAFVTALNIPRAVVPA-NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
++ G + A + + + Y + G NE + L+ D+V+W +
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAM 384
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTE 501
I +G Y E + LF+ M P++YT ++LS S L +L G +HG +K E
Sbjct: 385 IVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGE 444
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEK 560
I S V N LI MY K GSI S+ + F+ + +R+ ++WT++I AL +G A+ ALE
Sbjct: 445 IYS--VSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
F M G +PD + + V +AC H GLV +G + F+ M + P + HY C+VDL
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G L+EA++ I MP P+ + W + L C+
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSACR 594
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 128/563 (22%), Positives = 250/563 (44%), Gaps = 106/563 (18%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G L A L + + AF +L Y + G +D F+ +P++ V+W +++ +
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYK 122
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G + + E++R + ++ + V+ ++ + LE G+++H ++K G +
Sbjct: 123 NIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVS 182
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG----------ALAESENFG--- 224
V+NSL+NMY +C A+ +F + ++D+ SWN +I A+A+ E
Sbjct: 183 VSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 225 ------------------KALELYLRMSVD-IVFPNQTTFVYVINSCAGLQNSILGKSIH 265
+AL+++ +M D ++ P++ T V+++CA L+ +G+ IH
Sbjct: 243 IVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIH 302
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHL--------------------------- 298
+ ++ + V +AL+ Y++C +E A
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 299 ------CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
F + ++++V+W A+I+GY +I L ++ RPN +T + +L
Sbjct: 363 MNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSV 422
Query: 352 SLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ + L Q+H ++ G V +L+T YAK+G I+ A A ++ R
Sbjct: 423 ASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSA---SRAFDLIRC--- 476
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
ER D VSW +I A A +G +E LELF+ M +
Sbjct: 477 ------------------------ER-DTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE--IISSDTFVCNMLIDMYGKCGSIGS 525
PD+ T+V + SAC+ + G ++K + I + + C ++D++G+ G +
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC--MVDLFGRAGLLQE 569
Query: 526 SVKIFNEMT-DRNVITWTALISA 547
+ + +M + +V+TW +L+SA
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSA 592
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 133/588 (22%), Positives = 245/588 (41%), Gaps = 135/588 (22%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVED-------------------------------ALRMF 29
MP R S+N+++SAY++ G ++ A+R+
Sbjct: 75 MPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIM 134
Query: 30 LYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNGLF---------------C 72
M+ G EP+QFT +L S + +E G ++ + ++K GL C
Sbjct: 135 GEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC 194
Query: 73 ADAFVG---------------TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
D + A++ L+ + G +D ++ FE M + +VTWNS++S +
Sbjct: 195 GDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYN 254
Query: 118 KHGFVEDCMFLFCELVR-SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ G+ + +F +++R S ++ + V+ +N + L GEQIH ++ GFD
Sbjct: 255 QRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISG 314
Query: 177 LVANSLVNMYFQCAGIWSAEKMF-----KDVEI--------------------------- 204
+V N+L++MY +C G+ +A ++ KD++I
Sbjct: 315 IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLK 374
Query: 205 -RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
RDVV+W +I + +G+A+ L+ M + PN T +++ + L + GK
Sbjct: 375 DRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQ 434
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS-NKNIVSWNALILGYASKS 322
IH +K+ V V +AL+ YAK ++ A F I ++ VSW ++I+ A
Sbjct: 435 IHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHG 494
Query: 323 SPTSIFLLIE-LLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMT 381
L E +L G RP+ T+ V + H ++ G + ++
Sbjct: 495 HAEEALELFETMLMEGLRPDHITYVGVFSAC-------THAGLVNQGRQYFD-------- 539
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWN 440
++ D + L+ +V ++ R G E + + ++ PD+V+W
Sbjct: 540 ------MMKDVDKIIPTLSHYACMVD------LFGRAGLLQEAQEFIEKMPIEPDVVTWG 587
Query: 441 IVIAACAHNGDYKEV-LELFKYMRAARIYPDN----YTFVSLLSACSK 483
+++AC YK + L R + P+N +L SAC K
Sbjct: 588 SLLSACR---VYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGK 632
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/450 (31%), Positives = 231/450 (51%), Gaps = 40/450 (8%)
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
WNT + LA+ F +AL LY +M PN TF + + SCA L ILG H ++
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSE--ISNKNIVSWNALILGYASKSS-PTS 326
K + FV + L+ Y K ++ A F E S K V +NAL+ GY S S +
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTS 382
+ L ++ + G N T ++ + ++ L+L HC ++ G+++ V+ +T
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
Y K G + N KL ++ ++SWN +
Sbjct: 197 YMKCGSV--------------------------------NYAQKLFDEMPVKGLISWNAM 224
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
++ A NG VLEL++ M ++PD T V +LS+C+ L ++G + I+ +
Sbjct: 225 VSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGF 284
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
+S+ F+ N LI+MY +CG++ + +F+ M +R +++WTA+I G++G + A++ F+
Sbjct: 285 -TSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFK 343
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
EM G +PD A + VL+AC H GL +G+E F+ M R+Y +EP +HY C+VDLL R
Sbjct: 344 EMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRA 403
Query: 623 GHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G LKEA+ +I +MP P+ +W L C+
Sbjct: 404 GRLKEAQTLIESMPIKPDGAVWGALLGACK 433
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 218/469 (46%), Gaps = 39/469 (8%)
Query: 18 RCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLN-PVEGAQLQASVLKNGLFCA-D 74
RC +++ AL ++ M+ G P FTF L SC +L+ P+ G+Q + K G C +
Sbjct: 27 RCQFLQ-ALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVG--CVFE 83
Query: 75 AFVGTALLGLYGRHGCLDEVVSVFED--MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL 132
FV T L+ +Y + +D VFE+ RK V +N++VS + + + + LF ++
Sbjct: 84 PFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQM 143
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
V + + +G+I + +LE G +H +K GFD ++ V N + MY +C +
Sbjct: 144 NEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSV 203
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC 252
A+K+F ++ ++ ++SWN ++ A++ LELY M ++ V P+ T V V++SC
Sbjct: 204 NYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSC 263
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
A L +G + K+ + + F+ +AL++ YA+C NL A F + + +VSW
Sbjct: 264 ANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWT 323
Query: 313 ALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYEN 371
A+I GY ++ L E+++ G P+ F VL + L +M N
Sbjct: 324 AIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRN 383
Query: 372 YEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL 431
Y+ G S + + R G+ E L+ +
Sbjct: 384 YQLEPGPEHYS---------------------------CMVDLLGRAGRLKEAQTLIESM 416
Query: 432 E-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
+PD W ++ AC + + E+ EL + R + P+N + LLS
Sbjct: 417 PIKPDGAVWGALLGACKIHKNV-ELAEL-AFERVIELEPENIGYYVLLS 463
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 152/317 (47%), Gaps = 11/317 (3%)
Query: 6 VVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDS-LNPVEGAQLQA 63
V +N+++S Y +A+ +F M G T GL+ +C S +N G+ L
Sbjct: 117 TVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHC 176
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVE 123
S LK G F +D V + +Y + G ++ +F++MP K L++WN++VS + ++G
Sbjct: 177 STLKYG-FDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLAT 235
Query: 124 DCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLV 183
+ + L+ + + V + VGV+ +N G ++ + +GF + N+L+
Sbjct: 236 NVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALI 295
Query: 184 NMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQT 243
NMY +C + A+ +F + R +VSW IIG + A++L+ M + P+ T
Sbjct: 296 NMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGT 355
Query: 244 TFVYVINSC--AGLQNSILGKSIHAKVIKN--ALECDVFVGSALVDFYAKCDNLEGAHLC 299
FV V+++C AGL + L + K++K LE S +VD + L+ A
Sbjct: 356 AFVCVLSACSHAGLTDQGLE---YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTL 412
Query: 300 FSEISNK-NIVSWNALI 315
+ K + W AL+
Sbjct: 413 IESMPIKPDGAVWGALL 429
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 135/265 (50%), Gaps = 12/265 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP + ++S+N+++S Y++ G + L ++ M G P T G+L SC +L G
Sbjct: 213 MPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVG 272
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+++ + +G F ++ F+ AL+ +Y R G L + +VF+ MP ++LV+W +I+ +G
Sbjct: 273 HEVEFKIQASG-FTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGM 331
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
HG E + LF E++RS + ++FV V+ S+ + G + ++ +N Y+L
Sbjct: 332 HGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRN---YQLEP 388
Query: 179 A----NSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLRM 233
+ +V++ + + A+ + + + I+ D W ++GA +N A EL
Sbjct: 389 GPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELA-ELAFER 447
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNS 258
+++ N +V + N + NS
Sbjct: 448 VIELEPENIGYYVLLSNIYSNANNS 472
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 231/419 (55%), Gaps = 19/419 (4%)
Query: 248 VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF--------YAKCDNLEG-AHL 298
++ SC+ + K IH +++ L DVFV S L+ + K NL G A+
Sbjct: 18 LLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYG 74
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
FS+I N N+ +N LI +++ + P+ F ++L+ P+ TF ++++S +
Sbjct: 75 IFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMEC 134
Query: 358 L----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
+ Q H I+R G++N YV SL+ YA GLI+ A + V +++AG
Sbjct: 135 VVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAG 194
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
Y + G + ++ ++ ++ +W+I+I A N +++ ++LF+ M+ + +
Sbjct: 195 -YCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETV 253
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
VS++S+C+ L L G H + K+ + + + + L+DMY +CG I ++++F E+
Sbjct: 254 MVSVISSCAHLGALEFGERAHEYVVKSHM-TVNLILGTALVDMYWRCGEIEKAIRVFEEL 312
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
D++ ++W+++I L ++G A +A+ F +M LGF P + L AVL+AC HGGLV +G+
Sbjct: 313 PDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGL 372
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
E++E M R YG+EP ++HY C+VD+L R G L EAE I MP PNA I L C+
Sbjct: 373 EIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACK 431
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 224/491 (45%), Gaps = 59/491 (12%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGL---------YGRHGCLDEVVSV 97
L SC S + ++ + +L+ L +D FV + LL L + L +
Sbjct: 19 LQSCSSFSDLK--IIHGFLLRTHLI-SDVFVASRLLALALCVDDSTFHKPTNLLGYAYGI 75
Query: 98 FEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL 157
F + +L +N ++ F + ++++S + +F +I + + +
Sbjct: 76 FSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMECV 135
Query: 158 EFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTI---- 213
GEQ H +++ GF ++ V NSLV+MY C I +A ++F + RDVVSW ++
Sbjct: 136 VVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGY 195
Query: 214 ---------------------------IGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
I A++ F KA++L+ M + V N+T V
Sbjct: 196 CKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMV 255
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
VI+SCA L G+ H V+K+ + ++ +G+ALVD Y +C +E A F E+ +K
Sbjct: 256 SVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDK 315
Query: 307 NIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS----SLAFQLLQLH 361
+ +SW+++I G A + +I ++++LG+ P + T + VL + L + L+++
Sbjct: 316 DSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIY 375
Query: 362 CLIIR-MGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PRAVVPANIIAG--IYNR 417
+ R G E G ++ ++G +++A F+ + + P A + ++ IY
Sbjct: 376 ENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKIYKN 435
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIA---ACAHNGDYKEVLELFKYMRAARI-YPDNYT 473
T +L ++ +P+ + ++++ ACA G ++++ L M+ + P ++
Sbjct: 436 TEVAERVGNMLIEV-KPEHSGYYVLLSNIYACA--GQWEKLESLRDIMKEKLVKKPPGWS 492
Query: 474 FVSLLSACSKL 484
+ + +K
Sbjct: 493 LIEIDGKINKF 503
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 129/293 (44%), Gaps = 43/293 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGG-------------- 46
MP R+VVS+ S+++ Y +CG VEDA MF M +R G
Sbjct: 180 MPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF 239
Query: 47 ------------------LLSCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGR 87
+ SC L +E G + V+K+ + + +GTAL+ +Y R
Sbjct: 240 ELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHM-TVNLILGTALVDMYWR 298
Query: 88 HGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGV 147
G +++ + VFE++P K ++W+SI+ HG + F ++VR + + + V
Sbjct: 299 CGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAV 358
Query: 148 IHGLSNEQDLEFGEQIHGLVIKN-GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRD 206
+ S+ ++ G +I+ + ++ G + L +V+M + + AE + ++
Sbjct: 359 LSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKP 418
Query: 207 VVSWNTIIGALAESENFGKALELYLR---MSVDIVFPNQTTFVYVIN--SCAG 254
I+GAL + K E+ R M +++ + +V + N +CAG
Sbjct: 419 NAP---ILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAG 468
>gi|297813281|ref|XP_002874524.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320361|gb|EFH50783.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 688
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 177/647 (27%), Positives = 308/647 (47%), Gaps = 76/647 (11%)
Query: 46 GLLSCDSLNPVE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK 104
GL C + + G +QA ++K G+ + F+ ++ +Y L + VF++M +
Sbjct: 11 GLRHCGKIQAFKRGESIQAHIVKQGI-SQNVFLANNVISMYVDFRLLSDAHKVFDEMTER 69
Query: 105 SLVTWNSIVSIFGKHGFVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQI 163
++VTW ++VS + G + L+ +V S E A E + V+ D++ G +
Sbjct: 70 NIVTWTTMVSGYTCDGKPSKAIELYRRMVESQEEAANEFIYSAVLKACGLVGDIQLGSFV 129
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
+ + K ++++ NS+V+M+ + + A FK++ + SWNT+I ++
Sbjct: 130 YERIGKENLKGDVVLMNSVVDMFVKNGRLSEANSSFKEILRPNSTSWNTLISGYCKAGMV 189
Query: 224 GKALELYLRMS--------------VDIVFPNQTTFV-------YVINSCA---GLQNS- 258
+A+ L+ R+ VD P F+ V++ A GL+
Sbjct: 190 EEAVSLFNRIPQPNIVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACS 249
Query: 259 -----ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN---KNIVS 310
+GK +H V+K+ LE F SAL+D Y+ C +L A F + +
Sbjct: 250 FGGLLTMGKQLHGCVVKSGLESSPFALSALIDMYSNCGSLSDAADVFHQEKPALCNTVAV 309
Query: 311 WNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLR---SSLAFQL-LQLHCLII 365
WN+++ G+ ++ + ++ LL+ L + + +T S L+ + + +L LQ+H L++
Sbjct: 310 WNSMLSGFLINEENEAALGLLLLLYKSDLCFDSYTLSGALKICINLVNLRLGLQVHSLVV 369
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
GYE +Y++GS I+ ++ G E
Sbjct: 370 VSGYE-LDYIVGS-------------------------------ILVDLHANVGNIQEAH 397
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
KL +L DI++++ +I C +G LF+ + + D + S+L CS L
Sbjct: 398 KLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSSILKVCSSLA 457
Query: 486 NLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
+L G +HGL IKK S+ L DMY KCG I +SV +F+ M +R+V++WT +
Sbjct: 458 SLGCGKQIHGLCIKKG--YQSEPVTATALGDMYVKCGEIDNSVVLFDGMLERDVVSWTGI 515
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I G NG + A + F +M +P+ V + +L+ACRH GL+ E + E M YG
Sbjct: 516 IVGFGQNGRVEEAFQYFHKMINSEIEPNEVTFLGLLSACRHSGLLEEARSILETMKCEYG 575
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+EP ++HY+CVVDLL + G +EAE++I MP P+ IW + L C
Sbjct: 576 LEPYLEHYYCVVDLLGQAGRFQEAEELIKKMPLEPDKTIWMSLLTAC 622
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 152/655 (23%), Positives = 285/655 (43%), Gaps = 118/655 (18%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPT-QFTFGGLL-SCDSLNPVE- 57
M +RN+V++ +++S Y+ G A+ ++ M+ E +F + +L +C + ++
Sbjct: 66 MTERNIVTWTTMVSGYTCDGKPSKAIELYRRMVESQEEAANEFIYSAVLKACGLVGDIQL 125
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G+ + + K L D + +++ ++ ++G L E S F+++ R + +WN+++S +
Sbjct: 126 GSFVYERIGKENLK-GDVVLMNSVVDMFVKNGRLSEANSSFKEILRPNSTSWNTLISGYC 184
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF------------------ 159
K G VE+ + LF + + + G + + + LEF
Sbjct: 185 KAGMVEEAVSLFNRIPQPNIVSWNCLISGFVDK-GSPRALEFLVRMQREGLVLDGFALPC 243
Query: 160 -------------GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF---KDVE 203
G+Q+HG V+K+G + ++L++MY C + A +F K
Sbjct: 244 GLKACSFGGLLTMGKQLHGCVVKSGLESSPFALSALIDMYSNCGSLSDAADVFHQEKPAL 303
Query: 204 IRDVVSWNTII-GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
V WN+++ G L EN L L D+ F + T + C L N LG
Sbjct: 304 CNTVAVWNSMLSGFLINEENEAALGLLLLLYKSDLCF-DSYTLSGALKICINLVNLRLGL 362
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG-YASK 321
+H+ V+ + E D VGS LVD +A N++ AH F + NK+I++++ LI G S
Sbjct: 363 QVHSLVVVSGYELDYIVGSILVDLHANVGNIQEAHKLFHRLPNKDIIAFSGLIRGCVKSG 422
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLG 377
+ + +L EL++LG ++F S +L+ + L Q+H L I+ GY++
Sbjct: 423 FNSLAFYLFRELIKLGLDADQFIVSSILKVCSSLASLGCGKQIHGLCIKKGYQSEP---- 478
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
V A + +Y + G+ + +V L + D+V
Sbjct: 479 ----------------------------VTATALGDMYVKCGEIDNSVVLFDGMLERDVV 510
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SW +I NG +E + F M + I P+ TF+ LLSAC GL+
Sbjct: 511 SWTGIIVGFGQNGRVEEAFQYFHKMINSEIEPNEVTFLGLLSACRH----------SGLL 560
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
++ I +T C ++ Y + + ++ LG G Q A
Sbjct: 561 EEARSI-LETMKCEYGLEPY--------------------LEHYYCVVDLLGQAGRFQEA 599
Query: 558 LEKFREMEFLGFKPDRVALIAVLTAC---RHGGLVREGMELFERMNRSYGVEPEM 609
E ++M +PD+ +++LTAC ++ GL+ + E++ +++ +P +
Sbjct: 600 EELIKKMP---LEPDKTIWMSLLTACGTHKNAGLI---TVIAEKLLKAFPEDPSL 648
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 215/495 (43%), Gaps = 59/495 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQF---------TFGGLLSCD 51
+P N+VS+N +IS + G AL + M G F +FGGLL+
Sbjct: 199 IPQPNIVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTM- 256
Query: 52 SLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVF-EDMPR--KSLVT 108
G QL V+K+GL + F +AL+ +Y G L + VF ++ P ++
Sbjct: 257 ------GKQLHGCVVKSGLE-SSPFALSALIDMYSNCGSLSDAADVFHQEKPALCNTVAV 309
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
WNS++S F + E + L L +S++ + G + N +L G Q+H LV+
Sbjct: 310 WNSMLSGFLINEENEAALGLLLLLYKSDLCFDSYTLSGALKICINLVNLRLGLQVHSLVV 369
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
+G++ + +V + LV+++ I A K+F + +D+++++ +I +S A
Sbjct: 370 VSGYELDYIVGSILVDLHANVGNIQEAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFY 429
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
L+ + + +Q ++ C+ L + GK IH IK + + +AL D Y
Sbjct: 430 LFRELIKLGLDADQFIVSSILKVCSSLASLGCGKQIHGLCIKKGYQSEPVTATALGDMYV 489
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSH 347
KC ++ + + F + +++VSW +I+G+ F +++ PNE TF
Sbjct: 490 KCGEIDNSVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFQYFHKMINSEIEPNEVTF-- 547
Query: 348 VLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
LG L+++ SGL+ +A + + + + P
Sbjct: 548 ----------------------------LG-LLSACRHSGLLEEARSILETMKCEYGLEP 578
Query: 408 ----ANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELF-KY 461
+ + + G++ E +L+ ++ PD W ++ AC + + + + K
Sbjct: 579 YLEHYYCVVDLLGQAGRFQEAEELIKKMPLEPDKTIWMSLLTACGTHKNAGLITVIAEKL 638
Query: 462 MRAARIYPDNYTFVS 476
++A P YT +S
Sbjct: 639 LKAFPEDPSLYTSLS 653
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 172/563 (30%), Positives = 262/563 (46%), Gaps = 73/563 (12%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAE----------------------- 196
G Q+H LV+K G + NSL+NMY + I A+
Sbjct: 288 GRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAK 347
Query: 197 --------KMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYV 248
K+F + + VS+ T+I L ++E F +ALE++ M D V PN T V V
Sbjct: 348 AGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNV 407
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
I +C+ + + IHA IK +E V V + L+ Y C + A F + N+
Sbjct: 408 IYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNL 467
Query: 309 VSWNALILGYAS-----------KSSPTSIFLLIELLQLGY----RPNE--FTFSHVLRS 351
VSWN ++ GYA + P + + GY R +E + +LRS
Sbjct: 468 VSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRS 527
Query: 352 SLAFQLL-------------------QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
LA + QLH ++++ G++ Y ++ +++ YA G++ A
Sbjct: 528 GLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLA 587
Query: 393 -LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
L F A + I NR ++ K+ + D+ SW+ +I+ A
Sbjct: 588 CLQFEVGAKDHLESWNALVSGFIKNRM--VDQARKIFDDMPERDVFSWSTMISGYAQTDQ 645
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+ LELF M A+ I P+ T VS+ SA + L L G H I I +D
Sbjct: 646 SRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRA- 704
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDR--NVITWTALISALGLNGFAQRALEKFREMEFLGF 569
LIDMY KCGSI S+++ FN++ D+ +V W A+I L +G A L+ F +M+
Sbjct: 705 ALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNI 764
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
KP+ + I VL+AC H GLV G +F M +Y VEP++ HY C+VDLL R G L+EAE
Sbjct: 765 KPNPITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAE 824
Query: 630 KIITTMPFPPNALIWRTFLEGCQ 652
++I +MP + +IW T L C+
Sbjct: 825 EMIRSMPMKADIVIWGTLLAACR 847
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/519 (23%), Positives = 221/519 (42%), Gaps = 96/519 (18%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFT----------FGGLLSC 50
MPD+ VS+ ++I + +AL +F M + G P T FG +L+C
Sbjct: 361 MPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNC 420
Query: 51 DSLNP------VEGAQLQASVLKNGLFCADAFVGTA-----------------LLGLYGR 87
++ VEG L ++ L +C + VG A +L Y +
Sbjct: 421 RMIHAIAIKLFVEGLVLVSTNLMRA-YCLCSGVGEARRLFDRMPEVNLVSWNVMLNGYAK 479
Query: 88 HGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGV 147
G +D +FE +P K +++W +++ + + + + ++ ++RS +AL E V +
Sbjct: 480 AGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNL 539
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI--------------- 192
+ + G Q+HG+V+K GFD + ++++ Y C +
Sbjct: 540 VSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHL 599
Query: 193 --WS--------------AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
W+ A K+F D+ RDV SW+T+I A+++ ALEL+ +M
Sbjct: 600 ESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVAS 659
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ PN+ T V V ++ A L G+ H + ++ + + +AL+D YAKC ++ A
Sbjct: 660 GIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAALIDMYAKCGSINSA 719
Query: 297 HLCFSEISNK--NIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSL 353
F++I +K ++ WNA+I G AS + + ++ + +PN TF VL +
Sbjct: 720 LQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSACC 779
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L++ I R+ +A N+ + +
Sbjct: 780 HAGLVEPGRRIFRI---------------------------MKSAYNVEPDIKHYGCMVD 812
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGD 451
+ R G E +++ + + DIV W ++AAC +GD
Sbjct: 813 LLGRAGLLEEAEEMIRSMPMKADIVIWGTLLAACRTHGD 851
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/596 (20%), Positives = 247/596 (41%), Gaps = 85/596 (14%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
NS+I+ Y++ G ++DA +F +C +LNP+ N
Sbjct: 308 NSLINMYAKRGSIKDAQLLFD------------------ACPTLNPISC---------NI 340
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
+ C Y + G LD +F+ MP K V++ +++ ++ + + +F
Sbjct: 341 MVCG-----------YAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVF 389
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
++ V + + V VI+ S+ ++ IH + IK + +LV+ +L+ Y C
Sbjct: 390 KDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLC 449
Query: 190 AGIWSAEK-------------------------------MFKDVEIRDVVSWNTIIGALA 218
+G+ A + +F+ V +DV+SW T+I
Sbjct: 450 SGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYI 509
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+AL +Y M + N+ V ++++C L G +H V+K +C F
Sbjct: 510 LMNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNF 569
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK---SSPTSIF-LLIELL 334
+ + ++ FYA C ++ A L F + ++ SWNAL+ G+ IF + E
Sbjct: 570 IQTTIIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERD 629
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD--- 391
+ ++ +S +A +L ++ G + E + S+ ++ A G + +
Sbjct: 630 VFSWSTMISGYAQTDQSRIALELFH---KMVASGIKPNEVTMVSVFSAIATLGTLKEGRW 686
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP--DIVSWNIVIAACAHN 449
A ++ +IP + +Y + G N ++ +Q+ + WN +I A +
Sbjct: 687 AHEYICNESIPLNDNLRAALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASH 746
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
G L++F M+ I P+ TF+ +LSAC + G + ++K + D
Sbjct: 747 GHASMCLDVFSDMQRYNIKPNPITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKH 806
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNG---FAQRALEKF 561
++D+ G+ G + + ++ M + +++ W L++A +G +RA E
Sbjct: 807 YGCMVDLLGRAGLLEEAEEMIRSMPMKADIVIWGTLLAACRTHGDVNIGERAAESL 862
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 170/404 (42%), Gaps = 71/404 (17%)
Query: 257 NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALIL 316
+S G+ +H+ V+K L + F+ ++L++ YAK +++ A L F N +S N ++
Sbjct: 284 SSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVC 343
Query: 317 GYASK-------------------SSPTSIFLLI------ELLQL-------GYRPNEFT 344
GYA S T I L+ E L++ G PN+ T
Sbjct: 344 GYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLT 403
Query: 345 FSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
+V+ + F + +H + I++ E V +LM +Y + +A
Sbjct: 404 LVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFD--R 461
Query: 401 IPRA-VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+P +V N++ Y + G + +L ++ D++SW +I E L ++
Sbjct: 462 MPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMY 521
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
+ M + + + V+L+SAC +L + G LHG++ K F+ +I Y
Sbjct: 522 RAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKG-FDCYNFIQTTIIHFYAA 580
Query: 520 CG-------------------------------SIGSSVKIFNEMTDRNVITWTALISAL 548
CG + + KIF++M +R+V +W+ +IS
Sbjct: 581 CGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGY 640
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
++ ALE F +M G KP+ V +++V +A G ++EG
Sbjct: 641 AQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEG 684
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 152/359 (42%), Gaps = 62/359 (17%)
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
S + Q QLH L++++G + ++ SL+ YAK G I DA A + NI+
Sbjct: 283 SSSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNP-ISCNIM 341
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
Y + GQ + KL + VS+ +I N ++E LE+FK MR+ + P++
Sbjct: 342 VCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPND 401
Query: 472 YTFVSLLSACSKL-----CNLALGSSLHGLIKKTEIISSDTF----VC------------ 510
T V+++ ACS C + ++ ++ ++S++ +C
Sbjct: 402 LTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDR 461
Query: 511 ---------NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
N++++ Y K G + + ++F + D++VI+W +I L AL +
Sbjct: 462 MPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMY 521
Query: 562 REMEFLGFKPDRVALIAVLTACR-----------HGGLVREGMELFERMNRS-------- 602
R M G + + ++ +++AC HG +V++G + + + +
Sbjct: 522 RAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAAC 581
Query: 603 -----------YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G + ++ ++ +V ++ + +A KI MP + W T + G
Sbjct: 582 GMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMP-ERDVFSWSTMISG 639
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 183/667 (27%), Positives = 301/667 (45%), Gaps = 94/667 (14%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQA 63
+N ++NS+++ +++ G V DA ++F M R G L N VE +A
Sbjct: 46 KNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHN---NMVE----EA 98
Query: 64 SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRK-SLVTWNSIVSIFGKHGFV 122
L + + D F ++ Y R G L++ +FE +P K WN++++ + K G
Sbjct: 99 HKLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKKGRF 158
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+D +F + +K+ Y NS+
Sbjct: 159 DDAEKVF----------------------------------EKMPVKDLVSY-----NSM 179
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
+ Y Q + A K F+ + R+VVSWN ++ + + G A EL+ + I PN
Sbjct: 180 LAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEK----IPDPNA 235
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALEC-DVFVGSALVDFYAKCDNLEGAHLCFS 301
++V ++ C ++ GK + A+ + + + C +V +A++ Y + ++ A F
Sbjct: 236 VSWVTML--CGFARH---GKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFK 290
Query: 302 EISNKNIVSWNALILGYAS----------------KSSPTSIFLLIELLQLGYRPNEFTF 345
E K+ VSW +I GY K L+ L+Q G
Sbjct: 291 ETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNG-------- 342
Query: 346 SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+ +S F L I S++ Y +SG +S+AL + + AV
Sbjct: 343 -RIDEASQVFSQLNKRDAI----------CWNSMIAGYCQSGRMSEALNLFRQMPVKNAV 391
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+I+G Y + G+ + ++ + +++SWN +I NG Y + L+ M
Sbjct: 392 SWNTMISG-YAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQE 450
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
PD TF LS+C+ L L +G LH LI K+ I+ D FV N LI MY KCG + S
Sbjct: 451 GKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYIN-DLFVSNALIAMYAKCGGVQS 509
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ K+F ++ ++I+W +LIS LNG+A A F +M G PD V I +L+AC H
Sbjct: 510 AEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSH 569
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GL +G++LF+ M + +EP +HY C+VDLL R G L+EA I+ M NA +W
Sbjct: 570 AGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWG 629
Query: 646 TFLEGCQ 652
+ L C+
Sbjct: 630 SLLAACR 636
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 146/606 (24%), Positives = 254/606 (41%), Gaps = 104/606 (17%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV-EGA 59
M RN+VS+N++I+ Y VE+A ++F M R F++ +++C + + E A
Sbjct: 74 MSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAER----DNFSWALMITCYTRKGMLEKA 129
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ ++ + L D A++ Y + G D+ VFE MP K LV++NS+++ + ++
Sbjct: 130 RELFELVPDKL---DTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQN 186
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL----EFGEQI------------ 163
G + M F + V S+ ++ G N DL E E+I
Sbjct: 187 GKMGLAMKFFERMAERNVV----SWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTML 242
Query: 164 -----HGLVI--KNGFDY----ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNT 212
HG ++ + FD ++ N+++ Y Q I A K+FK+ +D VSW T
Sbjct: 243 CGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTT 302
Query: 213 IIGALAESENFGKALELYLRMSVDIVFPN----------------QTTFVYVINSCAGLQ 256
+I +A E+Y +M V F + A
Sbjct: 303 MINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICW 362
Query: 257 NSILGKSIHAKVIKNALEC-------DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
NS++ + + AL + + ++ YA+ ++ A F + +N++
Sbjct: 363 NSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVI 422
Query: 310 SWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLI 364
SWN+LI G+ ++ L+ + Q G +P++ TF+ L S L QLH LI
Sbjct: 423 SWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELI 482
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
++ GY N +V +L+ YAK G + A
Sbjct: 483 LKSGYINDLFVSNALIAMYAKCGGVQSA-------------------------------- 510
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
K+ +E D++SWN +I+ A NG E F+ M + PD TF+ +LSACS
Sbjct: 511 EKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHA 570
Query: 485 CNLALGSSLHGLIKKTEIIS--SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITW 541
G L + + I ++ + C L+D+ G+ G + + I M + N W
Sbjct: 571 GLTNQGVDLFKCMIEGFAIEPLAEHYSC--LVDLLGRMGRLEEAFNIVRGMKVKANAGLW 628
Query: 542 TALISA 547
+L++A
Sbjct: 629 GSLLAA 634
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/405 (20%), Positives = 171/405 (42%), Gaps = 51/405 (12%)
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
+VF + + + K ++ A FS + +KN ++N+++ +A + L + +
Sbjct: 16 NVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMS 75
Query: 336 -----------LGYRPNEFT-FSHVL------RSSLAFQLLQLHCL----IIRMGYENYE 373
GY N +H L R + ++ L+ + C ++ E +E
Sbjct: 76 QRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALM-ITCYTRKGMLEKARELFE 134
Query: 374 YVLGSLMTS--------YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
V L T+ YAK G DA + + V +++AG Y + G+ +
Sbjct: 135 LVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAG-YTQNGKMGLAM 193
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
K ++ ++VSWN+++A +N D ELF+ + P+ ++V++L ++
Sbjct: 194 KFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPD----PNAVSWVTMLCGFARHG 249
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
+ L + ++S + + + D+ I +VK+F E ++ ++WT +I
Sbjct: 250 KIVEARKLFDRMPCKNVVSWNAMIAAYVQDL-----QIDEAVKLFKETPYKDCVSWTTMI 304
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
+ G A E + +M + D A A+++ G + E ++F ++N+ +
Sbjct: 305 NGYVRVGKLDEAREVYNQMPY----KDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAI 360
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
++ ++ + G + EA + MP NA+ W T + G
Sbjct: 361 -----CWNSMIAGYCQSGRMSEALNLFRQMPV-KNAVSWNTMISG 399
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 178/411 (43%), Gaps = 36/411 (8%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAG 254
A+++F +V ++ ++N+++ A++ A +L+ +MS Q V AG
Sbjct: 36 AKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMS-------QRNLVSWNTMIAG 88
Query: 255 LQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-NIVSWNA 313
++ + + H K+ E D F + ++ Y + LE A F + +K + WNA
Sbjct: 89 YLHNNMVEEAH-KLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKLDTACWNA 147
Query: 314 LILGYASK---SSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGY 369
+I GYA K +F + + L Y ++ + LA + + RM
Sbjct: 148 MIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFE------RMAE 201
Query: 370 ENYEYVLGSLMTS-YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
N V +LM + + + + A + P AV ++ G + R G+ E KL
Sbjct: 202 RNV--VSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCG-FARHGKIVEARKLF 258
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLA 488
++ ++VSWN +IAA + E ++LFK Y D ++ ++++ ++ L
Sbjct: 259 DRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFK----ETPYKDCVSWTTMINGYVRVGKLD 314
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
++ + ++ + + ++ + G I + ++F+++ R+ I W ++I+
Sbjct: 315 EAREVYNQMPYKDVAAKTALMSGLIQN-----GRIDEASQVFSQLNKRDAICWNSMIAGY 369
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERM 599
+G AL FR+M + V+ +++ G + E+FE M
Sbjct: 370 CQSGRMSEALNLFRQMPV----KNAVSWNTMISGYAQAGEMDRATEIFEAM 416
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 33/289 (11%)
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
S++T +AK+G +SDA ++ R +V N + Y E KL + D
Sbjct: 53 SMVTVFAKNGRVSDARQLFDKMS-QRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNF 111
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SW ++I G ++ ELF+ + PD L +AC + G + G
Sbjct: 112 SWALMITCYTRKGMLEKARELFE------LVPD-----KLDTACWNA--MIAGYAKKGRF 158
Query: 498 KKTEII-----SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
E + D N ++ Y + G +G ++K F M +RNV++W +++ N
Sbjct: 159 DDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNC 218
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTA-CRHGGLVREGMELFERMNRSYGVEPEMDH 611
A E F ++ P+ V+ + +L RHG +V E +LF+RM V
Sbjct: 219 DLGSAWELFEKIP----DPNAVSWVTMLCGFARHGKIV-EARKLFDRMPCKNVVS----- 268
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYD 660
++ ++ V+ + EA K+ P+ + + W T + G R+ K D
Sbjct: 269 WNAMIAAYVQDLQIDEAVKLFKETPY-KDCVSWTTMING--YVRVGKLD 314
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 264/482 (54%), Gaps = 9/482 (1%)
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
L+ S+++ +F G+ A +F+ ++ +++ WNT+ A + + AL+LY+ M
Sbjct: 2 LIEFSVLSPHFD--GLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISL 59
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ PN +F +++ SCA + I G+ IH V+K + D++V ++L+ YA+ LE A
Sbjct: 60 GLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDA 119
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG--YRPNEFTFSHVLRSSLA 354
H F S++++VS+ ALI GYAS+ + L + + + N +V +
Sbjct: 120 HKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFK 179
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS---DALAFVTALNIPRAVVPANII 411
+ L+L+ +++ + E + +++++ A+SG I +++ + N++
Sbjct: 180 -EALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVL 238
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y++ G+ L L + D++SWN +I H YKE L LF+ M + P++
Sbjct: 239 IDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPND 298
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLI-KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
T +S+L AC+ L + +G +H I K+ + +++ + + LIDMY KCG I ++ ++F
Sbjct: 299 VTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVF 358
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ M R++ +W A+I ++G A A + F +M G PD + + +L+AC H G++
Sbjct: 359 DSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLD 418
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G +F M++ Y + P+++HY C++DLL G KEA+++I TMP P+ +IW + L+
Sbjct: 419 LGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKA 478
Query: 651 CQ 652
C+
Sbjct: 479 CK 480
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/493 (25%), Positives = 225/493 (45%), Gaps = 65/493 (13%)
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED---CMFLFCELVRSEVALTESSFVGV 147
L +S+FE + +L+ WN++ F H D + L+ ++ + SF +
Sbjct: 15 LSYAISIFETIQEPNLLIWNTM---FRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFL 71
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG---------------- 191
+ + + L G+QIHG V+K G+D ++ V SL++MY Q
Sbjct: 72 LKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHV 131
Query: 192 ---------------IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
I +A K+F ++ ++DVVSWN +I E+ NF +ALELY M
Sbjct: 132 VSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKT 191
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+++T V V+++CA + LG+ +H+ + + ++ + + L+D Y+KC +E A
Sbjct: 192 NVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETA 251
Query: 297 HLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F ++ K+++SWN LI G+ + ++ L E+L+ G PN+ T VL +
Sbjct: 252 CGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC--- 308
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
H I +G + Y+ L +++A + +T+L +Y
Sbjct: 309 ----AHLGAIDIGRWIHVYINKRLKG-------VTNASSLLTSL------------IDMY 345
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ G ++ + + SWN +I A +G +LF MR I PD+ TFV
Sbjct: 346 AKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFV 405
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT- 534
LLSACS L LG + + + I+ +ID+ G CG + ++ M
Sbjct: 406 GLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPM 465
Query: 535 DRNVITWTALISA 547
+ + + W +L+ A
Sbjct: 466 EPDGVIWCSLLKA 478
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 222/454 (48%), Gaps = 55/454 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SC-DSLNPVEG 58
+ + N++ +N++ ++ AL++++ MI+ G P ++F LL SC S +EG
Sbjct: 25 IQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEG 84
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDE------------VVS---------- 96
Q+ VLK G + D +V T+L+ +Y ++G L++ VVS
Sbjct: 85 QQIHGHVLKLG-YDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYAS 143
Query: 97 ---------VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMF-----LFCELVRSEVALTES 142
+F+++ K +V+WN+++S G+VE C F L+ +++++ V ES
Sbjct: 144 RGYINNARKLFDEISVKDVVSWNAMIS-----GYVETCNFKEALELYKDMMKTNVKPDES 198
Query: 143 SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDV 202
+ V V+ + +E G Q+H + +GF + + N L+++Y +C + +A +F+ +
Sbjct: 199 TMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGL 258
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
+DV+SWNT+IG + +AL L+ M PN T + V+ +CA L +G+
Sbjct: 259 AKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGR 318
Query: 263 SIHA---KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
IH K +K + ++L+D YAKC ++E A F + +++ SWNA+I G+A
Sbjct: 319 WIHVYINKRLKGVTNASSLL-TSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFA 377
Query: 320 SKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV--- 375
+ F L ++ + G P++ TF +L + +L L I R ++Y+
Sbjct: 378 MHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKL 437
Query: 376 --LGSLMTSYAKSGLISDALAFVTALNI-PRAVV 406
G ++ GL +A + + + P V+
Sbjct: 438 EHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVI 471
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/429 (33%), Positives = 220/429 (51%), Gaps = 39/429 (9%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYA--KCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
K +HA +I N L V L+ A ++ AH F++IS +I WN +I G A
Sbjct: 30 KQLHAFLIVNGLNSTTSVLRELIFVSAIVVSGTMDYAHQLFAQISQPDIFMWNTMIRGSA 89
Query: 320 SKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEY 374
P T++ L ++ G RP++FTFS VL++ ++L H +++ G+++ +
Sbjct: 90 QTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIHGKVLKSGFQSNTF 149
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
V +L+ +A G ++ A A A + R VVP + + Y R G+ + +L ++
Sbjct: 150 VRNTLIYFHANCGDLATARALFDA-SAKREVVPWSALTAGYARRGKLDVARQLFDEMPMK 208
Query: 435 DIVSWNIVIAACAHNGDY-------------------------------KEVLELFKYMR 463
D+VSWN++I A A +G+ KE LE+F MR
Sbjct: 209 DLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMR 268
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
PD+ T +S+LSA + L +L +G +H I + N LIDMY KCGSI
Sbjct: 269 DLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGSI 328
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
G+++++F M ++ +W ++I L L+G A+ ++ F+EM L KP+ + +AVL AC
Sbjct: 329 GNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVAC 388
Query: 584 RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALI 643
H G VREG F M + +EP + HY C+VD+L R G L EA I TM PNA+I
Sbjct: 389 SHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAII 448
Query: 644 WRTFLEGCQ 652
WRT L C+
Sbjct: 449 WRTLLGACR 457
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 191/420 (45%), Gaps = 62/420 (14%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GA 59
PD + +N++I ++ A+ ++ M NRG P +FTF +L +C L+ V+ G
Sbjct: 76 PD--IFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGF 133
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ VLK+G F ++ FV L+ + G L ++F+ ++ +V W+++ + + +
Sbjct: 134 GIHGKVLKSG-FQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARR 192
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ++ LF E+ + L+
Sbjct: 193 GKLDVARQLFDEMPMKD---------------------------------------LVSW 213
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N ++ Y + + A K+F +V +DVV+WN +I S +ALE++ M
Sbjct: 214 NVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQR 273
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNAL-ECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T + ++++ A L + +GK IH + + V + +AL+D YAKC ++ A
Sbjct: 274 PDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALE 333
Query: 299 CFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL-------- 349
F + K+ SWN++I G A + SI L E+L+L +PNE TF VL
Sbjct: 334 VFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVACSHAGK 393
Query: 350 --RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PRAVV 406
+ F L++ + I ++Y G ++ ++GL+ +A F+ + I P A++
Sbjct: 394 VREGRMYFNLMK-NVFKIEPNIKHY----GCMVDILGRAGLLIEAFDFIDTMEIEPNAII 448
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/526 (20%), Positives = 202/526 (38%), Gaps = 95/526 (18%)
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
V G SVL+ +F + V G +D +F + + + WN+++
Sbjct: 38 VNGLNSTTSVLRELIFVSAIVVS----------GTMDYAHQLFAQISQPDIFMWNTMIRG 87
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ + L+ ++ V + +F V+ + ++ G IHG V+K+GF
Sbjct: 88 SAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIHGKVLKSGFQSN 147
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V N+L+ + C + +A +F R+VV W+ + A A +L+ M +
Sbjct: 148 TFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARRGKLDVARQLFDEMPM 207
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D+ + ++ YAK +E
Sbjct: 208 K---------------------------------------DLVSWNVMITAYAKHGEMEK 228
Query: 296 AHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
A F E+ K++V+WNA+I GY S+ + ++ + + LG RP++ T +L +S
Sbjct: 229 ARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASAD 288
Query: 355 FQLLQ----LHCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
L+ +H I M + +L +L+ YAK G I +AL + +
Sbjct: 289 LGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNS 348
Query: 410 IIAGIYNRTGQYNETVKLLSQLER----PDIVSWNIVIAACAHNGDYKE----------- 454
II G+ G E++ L ++ R P+ +++ V+ AC+H G +E
Sbjct: 349 IIGGLA-LHGHAEESINLFQEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNV 407
Query: 455 ----------------------VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
++E F ++ I P+ + +LL AC ++ LG
Sbjct: 408 FKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRR 467
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
+ + K S +V +L ++Y G K+ M D V
Sbjct: 468 ANEQLLKMRKDESGDYV--LLSNIYASQGEWDGVQKVRKLMDDGGV 511
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 13/246 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPVE-G 58
+P ++VV++N++I+ Y ++AL MF M + G P T +LS + L +E G
Sbjct: 236 VPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIG 295
Query: 59 AQLQASVLKNGLFCAD--AFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
++ S+ + C D + AL+ +Y + G + + VF+ M +K +WNSI+
Sbjct: 296 KKIHRSIFD--MCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGL 353
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
HG E+ + LF E++R ++ E +FV V+ S+ + G L +KN F E
Sbjct: 354 ALHGHAEESINLFQEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNL-MKNVFKIEP 412
Query: 177 LVAN--SLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGAL---AESENFGKALELY 230
+ + +V++ + + A +EI + + W T++GA + E +A E
Sbjct: 413 NIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQL 472
Query: 231 LRMSVD 236
L+M D
Sbjct: 473 LKMRKD 478
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 218/436 (50%), Gaps = 19/436 (4%)
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
Q F ++ +C ++ K IH ++I N F+ L+ FY NL AH F
Sbjct: 18 QQHFFSLLQTCDTIKKL---KQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFE 74
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVL----RSSLAFQ 356
I N + WN +I G++ +P + L +++ PNEFT+S ++ RS L +
Sbjct: 75 RIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLRE 134
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN--IPRAVVPANIIAGI 414
Q+H ++ GY +V SL+ YA +G + + R +V N +
Sbjct: 135 GEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAG 194
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y R G + ++ ++ ++VSW +IA CA G K+ L LF MR A + D
Sbjct: 195 YVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVAL 254
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC---NMLIDMYGKCGSIGSSVKIFN 531
V+ LSAC++L +L LG+ +H I + + + N LI MY CG I + K+F
Sbjct: 255 VAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFI 314
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF---KPDRVALIAVLTACRHGGL 588
M R+ I+WT++I+ G A+ AL F+ M+ LG +PD + I VL AC H G
Sbjct: 315 GMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGF 374
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
V +G FE MN+ +G+ P ++HY C+VDLL R G L EA ++I +MP PN +W L
Sbjct: 375 VDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALL 434
Query: 649 EGCQRCRIAKYDTLNS 664
G CRI K L S
Sbjct: 435 GG---CRIHKNAELAS 447
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 195/444 (43%), Gaps = 34/444 (7%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
+QIH +I NGF + + L++ Y + +A K+F+ +E WN +I ++S
Sbjct: 35 KQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQS 94
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
E K +ELY RM PN+ T+ ++I CA + G+ +H +V+ N +VFV
Sbjct: 95 ETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANGYCTNVFVR 154
Query: 281 SALVDFYAKC---DNLEGAHLCFSEISNKNIVSWNALILGY---ASKSSPTSIF------ 328
++LV+ YA D + A F EI ++NIVSWN+L+ GY IF
Sbjct: 155 TSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPER 214
Query: 329 -------LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCL-IIRMGYENYEYVLGSLM 380
++ Q+G H +R + +L Q+ + + E + LG+ +
Sbjct: 215 NVVSWTTMIAGCAQIGRCKQALHLFHEMRRA-GVKLDQVALVAALSACAELGDLKLGTWI 273
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
SY L + + +LN N + +Y G ++ K+ +++ +SW
Sbjct: 274 HSYIDERLHAGNQPLLVSLN--------NSLIHMYASCGVIDKAYKVFIGMQQRSTISWT 325
Query: 441 IVIAACAHNGDYKEVLELFKYMR---AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
+I A G +E L +F++M+ PD TF+ +L ACS + G +
Sbjct: 326 SMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECM 385
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISALGLNGFAQR 556
K I ++D+ + G + + ++ M + N W AL+ ++ A+
Sbjct: 386 NKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAEL 445
Query: 557 ALEKFREMEFLGFKPDRVALIAVL 580
A +++ L KPD+ A VL
Sbjct: 446 ASHVAQKLA-LELKPDQAAGYLVL 468
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 183/453 (40%), Gaps = 81/453 (17%)
Query: 41 QFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFED 100
Q F L +CD++ ++ Q+ ++ NG F F+ LL Y G L VFE
Sbjct: 19 QHFFSLLQTCDTIKKLK--QIHTQIIVNG-FSQKNFLLVKLLSFYITSGNLLNAHKVFER 75
Query: 101 MPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFG 160
+ S WN ++ + + L+ +V +E E ++ +I G + + L G
Sbjct: 76 IENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREG 135
Query: 161 EQIHGLVIKNGFDYELLVANSLVNM----------------------------------Y 186
EQ+HG V+ NG+ + V SLVN+ Y
Sbjct: 136 EQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGY 195
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+C + A ++F ++ R+VVSW T+I A+ +AL L+ M V +Q V
Sbjct: 196 VRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALV 255
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECD----VFVGSALVDFYAKCDNLEGAHLCFSE 302
+++CA L + LG IH+ + + + V + ++L+ YA C ++ A+ F
Sbjct: 256 AALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIG 315
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGY---RPNEFTFSHVLRSSLAFQLL 358
+ ++ +SW ++I G+A + + + +Q LG RP+ TF VL
Sbjct: 316 MQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVL--------- 366
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGI 414
+ + +G + F +N +VP + +
Sbjct: 367 ----------------------CACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDL 404
Query: 415 YNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
+R G +E +L+ + +P+ W ++ C
Sbjct: 405 LSRAGFLDEAHRLIESMPMKPNDAVWGALLGGC 437
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 168/379 (44%), Gaps = 46/379 (12%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGAQLQASVL 66
+N +I +S+ + ++ M+ EP +FT+ L+ + + + EG Q+ V+
Sbjct: 84 WNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVV 143
Query: 67 KNGLFCADAFVGTALLGLYG----------------------------------RHGCLD 92
NG +C + FV T+L+ LY R G +D
Sbjct: 144 ANG-YCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVD 202
Query: 93 EVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS 152
+F++MP +++V+W ++++ + G + + LF E+ R+ V L + + V + +
Sbjct: 203 GARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACA 262
Query: 153 NEQDLEFGEQIHGLVIK--NGFDYELLVA--NSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
DL+ G IH + + + + LLV+ NSL++MY C I A K+F ++ R +
Sbjct: 263 ELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTI 322
Query: 209 SWNTIIGALAESENFGKALELY---LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
SW ++I A+ + +AL ++ R+ D P+ TF+ V+ +C+ G+
Sbjct: 323 SWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFF 382
Query: 266 AKVIKN-ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK-NIVSWNALILGYASKSS 323
+ K + + +VD ++ L+ AH + K N W AL+ G +
Sbjct: 383 ECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKN 442
Query: 324 PTSIFLLIELLQLGYRPNE 342
+ + L L +P++
Sbjct: 443 AELASHVAQKLALELKPDQ 461
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP+RNVVS+ ++I+ ++ G + AL +F M G + Q LS C L ++
Sbjct: 211 MPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLG 270
Query: 60 QLQASVLKNGLFCAD----AFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
S + L + + +L+ +Y G +D+ VF M ++S ++W S+++
Sbjct: 271 TWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITG 330
Query: 116 FGKHGFVEDCMFLFCELVR---SEVALTESSFVGVI 148
F K G E+ + +F + R E +F+GV+
Sbjct: 331 FAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVL 366
>gi|125525878|gb|EAY73992.1| hypothetical protein OsI_01877 [Oryza sativa Indica Group]
Length = 870
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 174/654 (26%), Positives = 311/654 (47%), Gaps = 47/654 (7%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQAS 64
+V+ + I+S Y+ G + ++ +F ++N L ++ A + A
Sbjct: 79 DVILGSKILSCYANLGALHESRLVFQKIVNDDIS---------LWNSAMVDYFRAGVHAD 129
Query: 65 VLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK--HGFV 122
LK L + FVG++L+GLY + ++ VFE++ K +V + S+++ + +
Sbjct: 130 SLKLAL-SGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIA 188
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY-ELLVANS 181
+ + +++++ + + + V ++ N L+ G+ +H I+ + ++ S
Sbjct: 189 WNAFEIATDMLQNNLEINRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETS 248
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES-ENFGKALELYLRMSVDIVFP 240
+VN Y +C SA + ++ + V SWN ++ L + ++F L + + V P
Sbjct: 249 IVNFYTRCGAYQSAATVLQNSK-GTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTP 307
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ TF V+++CA L SIHA I+ + DV + +AL++ Y KC + + F
Sbjct: 308 DSVTFANVLSACAELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYLF 367
Query: 301 SEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ 359
++ K++VS+NA+I GY + + LL ++ G P+ F+ VL AF
Sbjct: 368 DQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPD---FATVLSLLAAFA--- 421
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
+ + V G + +A + G SD V N I +Y+
Sbjct: 422 ----------DQRDLVRGRWIHGFAIRHGFCSD-------------VDVENQILYMYSAC 458
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
G+ + LE+ ++VSW ++ C NG EV++LF+ M+ PD+ + V+ +
Sbjct: 459 GKIAAARAIFDSLEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAV 518
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
A S L +L +H + ++ ++ D N LI Y KCG + S +F + RN+
Sbjct: 519 QAVSDLGHLNGLKQIHCFVYRS-LLEKDKITANSLISAYAKCGKLDLSAGLFFSLKYRNL 577
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
TW A+ISA ++GF LE F++ME +PD + VLTAC H GLV++G +F
Sbjct: 578 DTWNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTACSHAGLVKDGWRIFNS 637
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M Y V P+ +HY C+VDLL R GHL++ K I + I+ L C+
Sbjct: 638 MTSVYSVLPQEEHYGCMVDLLGRAGHLEDGYKFIKLSTLKDKSTIFCALLSACR 691
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 127/532 (23%), Positives = 225/532 (42%), Gaps = 86/532 (16%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ A+V +GL C D +G+ +L Y G L E VF+ + + WNS + + +
Sbjct: 66 KIHANVFTHGL-CWDVILGSKILSCYANLGALHESRLVFQKIVNDDISLWNSAMVDYFRA 124
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G D + ++AL+ + FVG
Sbjct: 125 GVHADSL---------KLALSGNKFVG--------------------------------- 142
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESEN--FGKALELYLRMSVDI 237
+SL+ +Y + + + +F+++ +D+V++ ++I +E+ + A E+ M +
Sbjct: 143 SSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQNN 202
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE-CDVFVGSALVDFYAKCDNLEGA 296
+ N+ T V ++ L GKS+H I+ A+ D + +++V+FY +C + A
Sbjct: 203 LEINRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSA 262
Query: 297 HLCFSEISNKNIVSWNALILGY--ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
S + SWNAL+ G A +S +L + L + P+ TF++VL +
Sbjct: 263 ATVLQN-SKGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAE 321
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+H IR IP VV
Sbjct: 322 LCYFCFAASIHAYFIRRF--------------------------------IPMDVVLTTA 349
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+ +Y + + + L QL D+VS+N +I N E L YM A + PD
Sbjct: 350 LIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPD 409
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
T +SLL+A + +L G +HG + SD V N ++ MY CG I ++ IF
Sbjct: 410 FATVLSLLAAFADQRDLVRGRWIHGFAIR-HGFCSDVDVENQILYMYSACGKIAAARAIF 468
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ + +N+++WTA++ NG A ++ F+ M+ G KPD V+L+ + A
Sbjct: 469 DSLEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQA 520
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 130/256 (50%), Gaps = 5/256 (1%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQL 61
++VVS+N++I Y + +A + YM+ G P T LL+ D + V G +
Sbjct: 373 KDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRWI 432
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
+++G FC+D V +L +Y G + ++F+ + +K+LV+W +++ +G
Sbjct: 433 HGFAIRHG-FCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMMKGCLSNGH 491
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
++ + LF + + S V + +S+ L +QIH V ++ + + + ANS
Sbjct: 492 ADEVVQLFQVMQKYGEKPDSVSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANS 551
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L++ Y +C + + +F ++ R++ +WN +I A A LE++ +M + + P+
Sbjct: 552 LISAYAKCGKLDLSAGLFFSLKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQPD 611
Query: 242 QTTFVYVINSC--AGL 255
+ TF V+ +C AGL
Sbjct: 612 ELTFSTVLTACSHAGL 627
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 175/434 (40%), Gaps = 56/434 (12%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
K IHA V + L DV +GS ++ YA L + L F +I N +I WN+ ++ Y
Sbjct: 65 KKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVNDDISLWNSAMVDYFRA 124
Query: 322 SSPTSIFLLIELLQLGYRPNEFTFSHVLR------------------------------- 350
+ + L+L N+F S ++
Sbjct: 125 G------VHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMIT 178
Query: 351 ------SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRA 404
S+A+ ++ +++ E L SL+ G + + + + +I RA
Sbjct: 179 GYSETVDSIAWNAFEIATDMLQNNLEINRVTLVSLLQIAGNLGALQEGKS-LHCYSIRRA 237
Query: 405 V-VPANI----IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ V +I I Y R G Y +L Q + + SWN +++ G ++
Sbjct: 238 IGVSDDILETSIVNFYTRCGAYQSAATVL-QNSKGTVASWNALLSGLNRAGQSFNAIQYL 296
Query: 460 KYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYG 518
M ++ PD+ TF ++LSAC++LC +S+H + I D + LI++Y
Sbjct: 297 PVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIHAYFIR-RFIPMDVVLTTALIEVYT 355
Query: 519 KCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
KC + S +F+++ ++V+++ A+I N A A M G PD +++
Sbjct: 356 KCTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLS 415
Query: 579 VLTA-CRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
+L A LVR +G ++D + ++ + G + A I ++
Sbjct: 416 LLAAFADQRDLVRG--RWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDSLE- 472
Query: 638 PPNALIWRTFLEGC 651
N + W ++GC
Sbjct: 473 KKNLVSWTAMMKGC 486
>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Vitis vinifera]
Length = 700
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 241/501 (48%), Gaps = 55/501 (10%)
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
V SWN II ++ AL+++ RM PN T ++ +C GL+ LGK+IHA
Sbjct: 10 VNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHA 69
Query: 267 KVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PT 325
+K+ + +V+V +++D Y+KC + + A F + NKN WN +I Y ++
Sbjct: 70 IALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKVED 129
Query: 326 SIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMT 381
++ LL + + G++P+ T++ +L R+ L Q +L +++MG + L++
Sbjct: 130 ALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKPNVVSFNVLIS 189
Query: 382 SYAKSGLISDALAFVTALNIPR---------------------AVVPA------------ 408
+ +SGL +AL + P +PA
Sbjct: 190 GFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKE 249
Query: 409 -----------------NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
+ + +Y + + K+ +++ + VSWN ++A +N
Sbjct: 250 IHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYIYNKQ 309
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
+E L+LF M + P + TF+ L AC + + G LHG K ++ + +
Sbjct: 310 PEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIAS 369
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
LIDMY KCGSI + +F+ +++V W A+ISA ++G A+ A F +ME LG P
Sbjct: 370 ALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFVQMELLGILP 429
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D + +++L+AC GLV EG + F M SYGV ++HY C+V +L G L EA
Sbjct: 430 DHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDF 489
Query: 632 ITTMPFPPNALIWRTFLEGCQ 652
I MP+PP+A +W T L+ C+
Sbjct: 490 IRQMPYPPDACMWATLLQACR 510
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 157/626 (25%), Positives = 266/626 (42%), Gaps = 113/626 (18%)
Query: 1 MPDR----NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNP 55
MP+R V S+N IIS + GY+EDAL MF M+ +P T +L +C L
Sbjct: 1 MPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKA 60
Query: 56 VE-GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
+ G + A LK+G+ + +V +++ +Y + G D VF K+ WN +++
Sbjct: 61 LRLGKAIHAIALKHGIV-GNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIA 119
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ G VED + L + + ++ ++ G + ++ +++ G
Sbjct: 120 AYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKP 179
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ N L++ + Q + A K+F+ I+ + ++ N + L L +R
Sbjct: 180 NVVSFNVLISGFQQSGLSYEALKVFR------------IMQSPSDGCNPNEVLNLSMR-- 225
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
PN T + +CA L GK IH ++N E ++FV SALVD YAKC +++
Sbjct: 226 -----PNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMD 280
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A+ F I +N VSWNAL+ GY P ++ L +E+L G +P+ TF + +
Sbjct: 281 SANKVFFRIDGRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACG 340
Query: 354 AFQLLQ----LHCLIIRMGYENYEYVLGS-LMTSYAKSGLISDALAFVTALNIPRAVVPA 408
++ LH + + + + S L+ YAK G I DA +
Sbjct: 341 DIAAIRFGRGLHGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFD----------- 389
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
S++E+ D+ WN +I+A + +G + +F M I
Sbjct: 390 --------------------SEVEK-DVPLWNAMISAFSVHGMARNAFAVFVQMELLGIL 428
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD+ TFVSLLSAC++ GL+++ K
Sbjct: 429 PDHITFVSLLSACAR----------DGLVEE--------------------------GWK 452
Query: 529 IFNEM-----TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
FN M + +T ++ LG G AL+ R+M + PD +L AC
Sbjct: 453 YFNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMP---YPPDACMWATLLQAC 509
Query: 584 RHGGLVREGMELFERMNRS-YGVEPE 608
R V E+ ER ++ + +EP+
Sbjct: 510 R----VHSNPEIGERAAKALFELEPD 531
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 134/399 (33%), Positives = 209/399 (52%), Gaps = 10/399 (2%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDF---YAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
K IHA+++K L D + + + F D L A + F + WN +I G+
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 319 ASKSSPTSIFLLIELLQLGYRP-NEFTFSHVLRS----SLAFQLLQLHCLIIRMGYENYE 373
+ P LL + + P N +TF +L++ S + Q+H I ++GYEN
Sbjct: 91 SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDV 150
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
Y + SL+ SYA +G A + P V ++I G Y + G+ + + L ++
Sbjct: 151 YAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG-YVKAGKMDIALTLFRKMAE 209
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
+ +SW +I+ KE L+LF M+ + + PDN + + LSAC++L L G +
Sbjct: 210 KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWI 269
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGF 553
H + KT I C +LIDMY KCG + ++++F + ++V WTALIS +G
Sbjct: 270 HSYLNKTRIRMDSVLGC-VLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGH 328
Query: 554 AQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYH 613
+ A+ KF EM+ +G KP+ + AVLTAC + GLV EG +F M R Y ++P ++HY
Sbjct: 329 GREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYG 388
Query: 614 CVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
C+VDLL R G L EA++ I MP PNA+IW L+ C+
Sbjct: 389 CIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 170/396 (42%), Gaps = 52/396 (13%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS--------VFEDMPRKSLVT 108
E Q+ A +LK GL D++ T L C+ S VF+ R
Sbjct: 29 ELKQIHARMLKTGLM-QDSYAITKFLSF-----CISSTSSDFLPYAQIVFDGFDRPDTFL 82
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
WN ++ F E + L+ ++ S +F ++ SN E QIH +
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142
Query: 169 KNGFDYELLVANSLVNMY-----FQCA--------------------GIWSAEKM----- 198
K G++ ++ NSL+N Y F+ A G A KM
Sbjct: 143 KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALT 202
Query: 199 -FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQN 257
F+ + ++ +SW T+I +++ +AL+L+ M V P+ + +++CA L
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 262
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
GK IH+ + K + D +G L+D YAKC +E A F I K++ +W ALI G
Sbjct: 263 LEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISG 322
Query: 318 YA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV- 375
YA +I +E+ ++G +PN TF+ VL + L++ LI +Y
Sbjct: 323 YAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKP 382
Query: 376 ----LGSLMTSYAKSGLISDALAFVTALNI-PRAVV 406
G ++ ++GL+ +A F+ + + P AV+
Sbjct: 383 TIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI 418
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
M ++N +S+ ++IS Y + ++AL++F M N EP + LS C L +E
Sbjct: 207 MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 266
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ S L D+ +G L+ +Y + G ++E + VF+++ +KS+ W +++S + H
Sbjct: 267 KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYH 326
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI 163
G + + F E+ + + +F V+ S +E G+ I
Sbjct: 327 GHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/535 (27%), Positives = 260/535 (48%), Gaps = 46/535 (8%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
Q H ++K+G + ++ L+ Y A+ + + + + S++++I AL +++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
F +++ ++ RM + P+ + CA L +GK IH + L+ D FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNK----------------------------------- 306
++ Y +C + A F +S+K
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 307 NIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----H 361
NIVSWN ++ G+ S ++ + ++ LG+ P++ T S VL S ++L + H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
+I+ G + V+ +++ Y KSG + ++ + A V I G+ +R G
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL-SRNGLV 334
Query: 422 NETVKLLS----QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
++ +++ Q ++VSW +IA CA NG E LELF+ M+ A + P++ T S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L AC + L G S HG + ++ + V + LIDMY KCG I S +FN M +N
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
++ W +L++ ++G A+ + F + KPD ++ ++L+AC GL EG + F+
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M+ YG++P ++HY C+V+LL R G L+EA +I MPF P++ +W L C+
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR 568
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/535 (22%), Positives = 219/535 (40%), Gaps = 112/535 (20%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+PD + SF+S+I A ++ ++ +F M + G P L C L+ + G
Sbjct: 76 IPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVG 135
Query: 59 AQLQASVLKNGLFCADAFVG-------------------------------TALLGLYGR 87
Q+ +GL DAFV +ALL Y R
Sbjct: 136 KQIHCVSCVSGLD-MDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYAR 194
Query: 88 HGCLDEVVSVFEDMP----RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
GCL+EVV + +M ++V+WN I+S F + G+ ++ + +F ++ + +
Sbjct: 195 KGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVT 254
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
V+ + + + L G IHG VIK G + V +++++MY + ++ +F E
Sbjct: 255 VSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFE 314
Query: 204 IRD-----------------------------------VVSWNTIIGALAESENFGKALE 228
+ + VVSW +II A++ +ALE
Sbjct: 315 MMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALE 374
Query: 229 LYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
L+ M V V PN T ++ +C + G+S H ++ L +V VGSAL+D YA
Sbjct: 375 LFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYA 434
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSH 347
KC + + + F+ + KN+V WN+L+ G++ + + E L++ +P+ +F+
Sbjct: 435 KCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFT- 493
Query: 348 VLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
SL+++ + GL + + ++ + P
Sbjct: 494 ------------------------------SLLSACGQVGLTDEGWKYFKMMSEEYGIKP 523
Query: 408 A----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC--AHNGDYKEV 455
+ + + R G+ E L+ ++ PD W ++ +C +N D E+
Sbjct: 524 RLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEI 578
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 224/398 (56%), Gaps = 9/398 (2%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFY--AKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
K IHA +++ L DVF S L+ F + + L A S+I N N+ +NALI G +
Sbjct: 34 KIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNLFIYNALIRGCS 93
Query: 320 SKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQL----LQLHCLIIRMGYENYEY 374
+ +P + F I+ L+ G P+ T ++++ + +Q H I+ G+E Y
Sbjct: 94 TSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDFY 153
Query: 375 VLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERP 434
V SL+ YA G I+ A + + V +IAG Y+R G +L ++
Sbjct: 154 VQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAG-YHRCGDAKSARELFDRMPER 212
Query: 435 DIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH 494
++V+W+ +I+ A N +++ +E F+ ++A + + V ++S+C+ L LA+G H
Sbjct: 213 NLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAH 272
Query: 495 GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFA 554
+ + ++ S + + ++DMY +CG++ +V +F ++ +++V+ WTALI+ L ++G+A
Sbjct: 273 EYVMRNKL-SLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYA 331
Query: 555 QRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHC 614
++AL F EM GF P + AVLTAC H G+V G+E+FE M R +GVEP ++HY C
Sbjct: 332 EKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGC 391
Query: 615 VVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+VDLL R G L++AEK + MP PNA IWR L C+
Sbjct: 392 MVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACR 429
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 125/537 (23%), Positives = 237/537 (44%), Gaps = 76/537 (14%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEV-------VSVFE 99
LL C S N + + A +L+ LF D F + L+ C+D + V
Sbjct: 23 LLECCS-NARDLKIIHAHMLRTHLF-FDVFAASRLIAF-----CIDSTTNLLHYAIRVAS 75
Query: 100 DMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF 159
+ +L +N+++ E+ + + +R + + ++ + ++
Sbjct: 76 QIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPM 135
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMY------------FQ------------------- 188
G Q HG IK+GF+ + V NSLV+MY FQ
Sbjct: 136 GMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHR 195
Query: 189 CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYV 248
C SA ++F + R++V+W+T+I A + F KA+E + + + V N+T V V
Sbjct: 196 CGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGV 255
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
I+SCA L +G+ H V++N L ++ +G+A+VD YA+C N+E A + F ++ K++
Sbjct: 256 ISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDV 315
Query: 309 VSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRM 367
+ W ALI G A + +++ E+ + G+ P + TF+ VL + H ++
Sbjct: 316 LCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTAC-------SHAGMVER 368
Query: 368 GYENYEYV------------LGSLMTSYAKSGLISDALAFVTALNI-PRAVVPANIIAGI 414
G E +E + G ++ ++G + A FV + + P A + ++
Sbjct: 369 GLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGAC 428
Query: 415 Y-NRTGQYNETV-KLLSQLERPDIVSWNIVIAAC-AHNGDYKEVLELFKYMRAARIY-PD 470
++ + E V K+L +++ P+ ++++ A +K+V + + M+ + P
Sbjct: 429 RIHKNVEVGERVGKILLEMQ-PEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPP 487
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
Y SL+ K+ +G H I+K E I D + I + G G+ ++
Sbjct: 488 GY---SLIEIDGKVHEFTIGDKTHPEIEKIERIWEDIILPK--IKLAGYVGNTAETM 539
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 179/412 (43%), Gaps = 28/412 (6%)
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG--IWSAEKMFKDVEIRDVVS 209
SN +DL+ IH +++ +++ A+ L+ + A ++ ++ ++
Sbjct: 28 SNARDLKI---IHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNLFI 84
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
+N +I + SEN + Y++ + P+ T +++ +CA L+N+ +G H + I
Sbjct: 85 YNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAI 144
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFL 329
K+ E D +V ++LV YA ++ A F + ++VSW +I GY S
Sbjct: 145 KHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSAR- 203
Query: 330 LIELLQLGYRPNEFTFSHVL----------RSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
EL N T+S ++ ++ F+ LQ ++ E V+ +
Sbjct: 204 --ELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVAN------ETVMVGV 255
Query: 380 MTSYAKSGLIS---DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
++S A G ++ A +V + ++ + +Y R G + V + QL D+
Sbjct: 256 ISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDV 315
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
+ W +IA A +G ++ L F M P + TF ++L+ACS + G +
Sbjct: 316 LCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFES 375
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISA 547
+K+ + ++D+ G+ G + + K +M + N W AL+ A
Sbjct: 376 MKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGA 427
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 130/303 (42%), Gaps = 45/303 (14%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSL-NPVEGAQLQ 62
N+ +N++I S E++ ++ + G P T L+ +C L N G Q
Sbjct: 81 NLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTH 140
Query: 63 ASVLKNGLFCADAFVGTALLGLY-----------------------------GRHGCLD- 92
+K+G F D +V +L+ +Y G H C D
Sbjct: 141 GQAIKHG-FEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDA 199
Query: 93 -EVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
+F+ MP ++LVTW++++S + ++ E + F L V E+ VGVI
Sbjct: 200 KSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSC 259
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
++ L GE+ H V++N L++ ++V+MY +C + A +F+ + +DV+ W
Sbjct: 260 AHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWT 319
Query: 212 TIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKN 271
+I LA KAL + M+ P TF V+ +C+ HA +++
Sbjct: 320 ALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACS-----------HAGMVER 368
Query: 272 ALE 274
LE
Sbjct: 369 GLE 371
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 111/220 (50%), Gaps = 5/220 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+RN+V+++++IS Y+R E A+ F + G + G++S C L + G
Sbjct: 209 MPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMG 268
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ V++N L + +GTA++ +Y R G +++ V VFE +P K ++ W ++++
Sbjct: 269 EKAHEYVMRNKL-SLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAM 327
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQI-HGLVIKNGFDYELL 177
HG+ E ++ F E+ + + +F V+ S+ +E G +I + +G + L
Sbjct: 328 HGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLE 387
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGA 216
+V++ + + AEK + ++ + W ++GA
Sbjct: 388 HYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGA 427
>gi|147818972|emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
Length = 1817
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 142/443 (32%), Positives = 227/443 (51%), Gaps = 42/443 (9%)
Query: 218 AESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
A+ N +ALE + RM+ P + +NSCA L N LG IHA++I+ E ++
Sbjct: 1292 AKHANVREALESFXRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNL 1351
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQL 336
F+ SALVD YAKCD + A F + + VSW ++I G++ +I E+L
Sbjct: 1352 FLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGS 1411
Query: 337 GYRPNEFTFSHVLRSSLAF-----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISD 391
+PN T+ + + Q LH ++++G+ +V+ L+ Y+K G I
Sbjct: 1412 QIKPNCVTYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQ 1471
Query: 392 A-LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
A L F T + ER +I+ +N +I+ + N
Sbjct: 1472 AVLLFGTTI--------------------------------ERDNIL-FNSMISGYSQNL 1498
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
+E L+LF MR + P ++T S+L+AC L L G +H L+ K S+ FV
Sbjct: 1499 XGEEALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGS-ESNVFVV 1557
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF-REMEFLGF 569
+ L+DMY KCGSI + +F + ++N + WT++I+ +G L F R + GF
Sbjct: 1558 SALLDMYSKCGSIDEARCVFXQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVXEEGF 1617
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
PD + AVLTAC H G + +G++ F +M R YG+ P++D Y C+VDL VR GHL++A+
Sbjct: 1618 TPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAK 1677
Query: 630 KIITTMPFPPNALIWRTFLEGCQ 652
+++ P PN+++W +FL C+
Sbjct: 1678 ELMEAXPXEPNSVMWGSFLSSCK 1700
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 218/469 (46%), Gaps = 50/469 (10%)
Query: 22 VEDALRMFLYMINRGFEPTQFTF-GGLLSCDSL-NPVEGAQLQASVLKNGLFCADAFVGT 79
V +AL F M G +PT+F L SC L N G Q+ A +++ G F + F+ +
Sbjct: 1297 VREALESFXRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTG-FEDNLFLNS 1355
Query: 80 ALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVAL 139
AL+ LY + + + VF+ M + V+W SI+S F K+G ++ + F E++ S++
Sbjct: 1356 ALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKP 1415
Query: 140 TESSFVGVIHGLSN-EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
++V I + E + +H V+K GF + V + L++ Y +C I A +
Sbjct: 1416 NCVTYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLL 1475
Query: 199 FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
F RD + +N++I +++ +AL+L++ M + + P T ++N+C L
Sbjct: 1476 FGTTIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACGSLTIL 1535
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
G+ +H+ V K E +VFV SAL+D Y+KC +++ A F + KN V W ++I GY
Sbjct: 1536 QQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWTSMITGY 1595
Query: 319 A-SKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRS---------------------SLAF 355
A S P + L L+ + G+ P+ F+ VL + L
Sbjct: 1596 AQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVP 1655
Query: 356 QLLQLHCLI---IRMGY-------------ENYEYVLGSLMTS---YAKSGLISDALAFV 396
L Q CL+ +R G+ E + GS ++S Y ++ L +A +
Sbjct: 1656 DLDQYACLVDLYVRNGHLRKAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGREAADKL 1715
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETV---KLLSQLERPDIVSWNIV 442
+ P + P +A IY + G ++E V KL+ Q W+ V
Sbjct: 1716 FKME-PCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWV 1763
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 228/501 (45%), Gaps = 57/501 (11%)
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
KH V + + F + S T+ ++ + + G QIH +I+ GF+ L
Sbjct: 1292 AKHANVREALESFXRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNL 1351
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ ++LV++Y +C I A+++F +E D VSW +II +++ +A+ + M
Sbjct: 1352 FLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGS 1411
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKS--IHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ PN T+V I++C GL+ +I + +HA V+K FV S L+D Y+KC ++
Sbjct: 1412 QIKPNCVTYVSXISACTGLE-TIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRID 1470
Query: 295 GAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A L F ++ + +N++I GY+ ++ L +Z+ G P + T + +L +
Sbjct: 1471 QAVLLFGTTIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACG 1530
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ +L Q+H L+ +MG E+ +V+ +L+ Y+K G I +A V+ +
Sbjct: 1531 SLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWTS 1590
Query: 410 IIAGIYNRTGQYNETVKLLSQLER-----PDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+I G Y ++G+ E + L +L PD + + V+ AC H G + ++ F MR
Sbjct: 1591 MITG-YAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRR 1649
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIG 524
+Y V L D + C L+D+Y + G +
Sbjct: 1650 ------DYGLVPDL---------------------------DQYAC--LVDLYVRNGHLR 1674
Query: 525 SSVKIFNEM-TDRNVITWTALISALGLNGFAQ---RALEKFREMEFLGFKPDRVALIAVL 580
+ ++ + N + W + +S+ L G A+ A +K +ME P +A+
Sbjct: 1675 KAKELMEAXPXEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAP----YVAMA 1730
Query: 581 TACRHGGLVREGMELFERMNR 601
+ GL E +E+ + M +
Sbjct: 1731 SIYAQAGLWSEVVEIRKLMKQ 1751
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 3/136 (2%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQ 60
+R+ + FNS+IS YS+ E+AL++F+ M N G PT T +L +C SL + +G Q
Sbjct: 1481 ERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGRQ 1540
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ + V K G ++ FV +ALL +Y + G +DE VF K+ V W S+++ + + G
Sbjct: 1541 VHSLVAKMGSE-SNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWTSMITGYAQSG 1599
Query: 121 FVEDCMFLFCELVRSE 136
+ + LF LV E
Sbjct: 1600 RGPEGLGLFERLVXEE 1615
>gi|242077973|ref|XP_002443755.1| hypothetical protein SORBIDRAFT_07g001380 [Sorghum bicolor]
gi|241940105|gb|EES13250.1| hypothetical protein SORBIDRAFT_07g001380 [Sorghum bicolor]
Length = 871
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 177/660 (26%), Positives = 293/660 (44%), Gaps = 109/660 (16%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M R++++++++I AY+ G +D + + + M+ G P +F +L +C +E G
Sbjct: 122 MACRDLLAWSAMIGAYAIRGLYKDVVSLAVTMVREGVTPDRFLITRILQACAYTEDLELG 181
Query: 59 AQLQASVLKNGLFCA---DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
+ + +++G D VG ++L +Y + L VFE M ++ L TWNS+ I
Sbjct: 182 VAMHSLAIRSGFMAETARDVPVGNSVLAMYVKCRELGRARVVFEKMGQRDLGTWNSM--I 239
Query: 116 FG--KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
FG + E+ L ++ R E + GV+
Sbjct: 240 FGCCQSNEWEEARMLLDDMRR------EGTLPGVV------------------------- 268
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVE----IRDVVSWNTIIGALAESENFGKALEL 229
N+L++ Y + + A +M + +E DVV+W +++ S+ G+AL
Sbjct: 269 ----TWNTLISSYARSGELDVAMEMLEQMEESGVAPDVVTWTSLVSGFVHSDRSGEALRC 324
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
++RM + V PN T I++CA L+ G +H IK +V G++LVD YAK
Sbjct: 325 FMRMRLAGVEPNGMTIASAISACASLRLLSQGMELHCHAIKVGSVNNVLSGNSLVDMYAK 384
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHV 348
C + A F+EI K+I SWN+++ GYA + L ++ LG R N T++ +
Sbjct: 385 CGEIVAAKRIFNEIPEKDIFSWNSMVAGYAQAGYCGKAYELFCKMESLGVRRNVITWNIM 444
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ IR G + + L +M SY
Sbjct: 445 ISG------------YIRNGDDERAFELFQMMESY------------------------- 467
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
G+ + D SWN +IA HNG L +F+ M++ +
Sbjct: 468 ----GV------------------KRDTASWNALIAGSVHNGHSDRALRIFRQMQSLLVR 505
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
PD T +S++ A + L + +H I + D + N LI+ Y K G + +
Sbjct: 506 PDYITILSIIPAFANLVAFSKVREIHACIFHNN-LEMDGKIANALINAYSKSGDLAGACA 564
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F+ + RN+I+W +I A L+G AL++F EM+ G +PD L AV+ A G
Sbjct: 565 VFDRHSSRNIISWNCIILAHLLHGSPCEALDRFCEMKQEGVRPDHTTLTAVIKAYGLQGK 624
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
V E ++F M Y + P++DHY +VDLL R G L+EA + I MP PN +W L
Sbjct: 625 VSEAKQIFYNMTHDYNIHPDLDHYAAIVDLLGRSGSLQEAYEFIDNMPLIPNLAVWEALL 684
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 217/470 (46%), Gaps = 76/470 (16%)
Query: 176 LLVANSLVNMYFQCAG-IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
++ L+ M+ CAG + A K+F+ + RD+++W+ +IGA A + + L + M
Sbjct: 96 IVTETKLITMH-SCAGRLGDARKVFEGMACRDLLAWSAMIGAYAIRGLYKDVVSLAVTMV 154
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC----DVFVGSALVDFYAKC 290
+ V P++ ++ +CA ++ LG ++H+ I++ DV VG++++ Y KC
Sbjct: 155 REGVTPDRFLITRILQACAYTEDLELGVAMHSLAIRSGFMAETARDVPVGNSVLAMYVKC 214
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGYRPNEFTFSHVL 349
L A + F ++ +++ +WN++I G S + LL ++ + G P T++
Sbjct: 215 RELGRARVVFEKMGQRDLGTWNSMIFGCCQSNEWEEARMLLDDMRREGTLPGVVTWN--- 271
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+L++SYA+SG + A+
Sbjct: 272 ----------------------------TLISSYARSGELDVAM---------------- 287
Query: 410 IIAGIYNRTGQYNETVKLLSQLER----PDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
++L Q+E PD+V+W +++ H+ E L F MR A
Sbjct: 288 ----------------EMLEQMEESGVAPDVVTWTSLVSGFVHSDRSGEALRCFMRMRLA 331
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ P+ T S +SAC+ L L+ G LH K + ++ N L+DMY KCG I +
Sbjct: 332 GVEPNGMTIASAISACASLRLLSQGMELHCHAIKVGSV-NNVLSGNSLVDMYAKCGEIVA 390
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ +IFNE+ ++++ +W ++++ G+ +A E F +ME LG + + + +++
Sbjct: 391 AKRIFNEIPEKDIFSWNSMVAGYAQAGYCGKAYELFCKMESLGVRRNVITWNIMISGYIR 450
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
G ELF+ M SYGV+ + ++ ++ V GH A +I M
Sbjct: 451 NGDDERAFELFQMME-SYGVKRDTASWNALIAGSVHNGHSDRALRIFRQM 499
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 7/258 (2%)
Query: 405 VVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA 464
+V + +++ G+ + K+ + D+++W+ +I A A G YK+V+ L M
Sbjct: 96 IVTETKLITMHSCAGRLGDARKVFEGMACRDLLAWSAMIGAYAIRGLYKDVVSLAVTMVR 155
Query: 465 ARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS---DTFVCNMLIDMYGKCG 521
+ PD + +L AC+ +L LG ++H L ++ ++ D V N ++ MY KC
Sbjct: 156 EGVTPDRFLITRILQACAYTEDLELGVAMHSLAIRSGFMAETARDVPVGNSVLAMYVKCR 215
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
+G + +F +M R++ TW ++I + + A +M G P V +++
Sbjct: 216 ELGRARVVFEKMGQRDLGTWNSMIFGCCQSNEWEEARMLLDDMRREGTLPGVVTWNTLIS 275
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFP--- 638
+ G + ME+ E+M S GV P++ + +V V EA + M
Sbjct: 276 SYARSGELDVAMEMLEQMEES-GVAPDVVTWTSLVSGFVHSDRSGEALRCFMRMRLAGVE 334
Query: 639 PNALIWRTFLEGCQRCRI 656
PN + + + C R+
Sbjct: 335 PNGMTIASAISACASLRL 352
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 151/501 (30%), Positives = 243/501 (48%), Gaps = 33/501 (6%)
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+ L +Q H L+++ G + + N L+ A A +F ++ +NT+I
Sbjct: 14 KSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLI 73
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI-LGKSIHAKVIKNAL 273
+ ++ F A+ +Y M P+ TF +V+ +C L + +G S+H+ VIK
Sbjct: 74 RGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGF 133
Query: 274 ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIE 332
+ DVFV + LV Y+K L A F EI KN+VSW A+I GY S ++ L
Sbjct: 134 DWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRG 193
Query: 333 LLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAK-SGLISD 391
LL++G RP+ FT +L + R+G + G + Y + SG + +
Sbjct: 194 LLEMGLRPDSFTLVRILYAC------------SRVG----DLASGRWIDGYMRESGSVGN 237
Query: 392 ALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
V A + +Y + G E ++ + D+V W+ +I A NG
Sbjct: 238 -------------VFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGM 284
Query: 452 YKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
KE L++F M+ + PD Y V + SACS+L L LG+ GL+ E +S + +
Sbjct: 285 PKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLS-NPVLGT 343
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
LID Y KCGS+ + ++F M ++ + + A+IS L + G A F +M +G +P
Sbjct: 344 ALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQP 403
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
D + +L C H GLV +G F M+ + V P ++HY C+VDL R G L EA+ +
Sbjct: 404 DGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDL 463
Query: 632 ITTMPFPPNALIWRTFLEGCQ 652
I +MP N+++W L GC+
Sbjct: 464 IRSMPMEANSIVWGALLGGCR 484
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 181/354 (51%), Gaps = 9/354 (2%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE---G 58
P N+ +N++I DA+ ++ M GF P FTF +L + P G
Sbjct: 62 PHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVG 121
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L + V+K G F D FV T L+ LY ++G L + VF+++P K++V+W +I+ + +
Sbjct: 122 LSLHSLVIKTG-FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIE 180
Query: 119 HGFVEDCMFLFCELVRSEVALTESSF--VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G + + LF L+ E+ L SF V +++ S DL G I G + ++G +
Sbjct: 181 SGCFGEALGLFRGLL--EMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNV 238
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VA SLV+MY +C + A ++F + +DVV W+ +I A + +AL+++ M +
Sbjct: 239 FVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRE 298
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+ V V ++C+ L LG + + + +G+AL+DFYAKC ++ A
Sbjct: 299 NVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQA 358
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVL 349
F + K+ V +NA+I G A + F + +++++G +P+ TF +L
Sbjct: 359 KEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLL 412
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 130/258 (50%), Gaps = 3/258 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
+P++NVVS+ +II Y G +AL +F ++ G P FT +L +C + +
Sbjct: 163 IPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASG 222
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ ++ + FV T+L+ +Y + G ++E VF+ M K +V W++++ + +
Sbjct: 223 RWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASN 282
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G ++ + +F E+ R V + VGV S LE G GL+ + F ++
Sbjct: 283 GMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLG 342
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+L++ Y +C + A+++FK + +D V +N +I LA + G A ++ +M +
Sbjct: 343 TALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQ 402
Query: 240 PNQTTFVYVINSC--AGL 255
P+ TFV ++ C AGL
Sbjct: 403 PDGNTFVGLLCGCTHAGL 420
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/535 (27%), Positives = 260/535 (48%), Gaps = 46/535 (8%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESE 221
Q H ++K+G + ++ L+ Y A+ + + + + S++++I AL +++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 222 NFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGS 281
F +++ ++ RM + P+ + CA L +GK IH + L+ D FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 282 ALVDFYAKCDNLEGAHLCFSEISNK----------------------------------- 306
++ Y +C + A F +S+K
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 307 NIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----H 361
NIVSWN ++ G+ S ++ + ++ LG+ P++ T S VL S ++L + H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
+I+ G + V+ +++ Y KSG + ++ + A V I G+ +R G
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL-SRNGLV 334
Query: 422 NETVKLLS----QLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
++ +++ Q ++VSW +IA CA NG E LELF+ M+ A + P++ T S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
L AC + L G S HG + ++ + V + LIDMY KCG I S +FN M +N
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
++ W +L++ ++G A+ + F + KPD ++ ++L+AC GL EG + F+
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M+ YG++P ++HY C+V+LL R G L+EA +I MPF P++ +W L C+
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR 568
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/534 (21%), Positives = 218/534 (40%), Gaps = 110/534 (20%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
+PD + SF+S+I A ++ ++ +F M + G P L C L+ + G
Sbjct: 76 IPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVG 135
Query: 59 AQL---------------QASVLKNGLFCA---------------DAFVGTALLGLYGRH 88
Q+ Q S+ + C D +ALL Y R
Sbjct: 136 KQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARK 195
Query: 89 GCLDEVVSVFEDMP----RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
GCL+EVV + +M ++V+WN I+S F + G+ ++ + +F ++ + +
Sbjct: 196 GCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTV 255
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
V+ + + + L G IHG VIK G + V +++++MY + ++ +F E+
Sbjct: 256 SSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEM 315
Query: 205 RD-----------------------------------VVSWNTIIGALAESENFGKALEL 229
+ VVSW +II A++ +ALEL
Sbjct: 316 MEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALEL 375
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
+ M V V PN T ++ +C + G+S H ++ L +V VGSAL+D YAK
Sbjct: 376 FREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAK 435
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTFSHV 348
C + + + F+ + KN+V WN+L+ G++ + + E L++ +P+ +F+
Sbjct: 436 CGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFT-- 493
Query: 349 LRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
SL+++ + GL + + ++ + P
Sbjct: 494 -----------------------------SLLSACGQVGLTDEGWKYFKMMSEEYGIKPR 524
Query: 409 ----NIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC--AHNGDYKEV 455
+ + + R G+ E L+ ++ PD W ++ +C +N D E+
Sbjct: 525 LEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEI 578
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 239/465 (51%), Gaps = 32/465 (6%)
Query: 191 GIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVI 249
G+ A +F + DV++WN+++ A S +AL+ Y M P++ TF ++
Sbjct: 27 GVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLL 86
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
CA L +GK +H +V+K L D+++ + L++ YA C +L+ A F + ++N V
Sbjct: 87 KGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKV 146
Query: 310 SWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMG 368
W ++I GY P LL + ++ G+ P+E T + +L +L L + M
Sbjct: 147 VWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMA-----TLVSACAELKDLGVGMK 201
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLL 428
++ + +++ V + + +Y + G ++
Sbjct: 202 LHSH-----------------------IREMDMKICAVLGSALVNMYAKCGDLKTARQVF 238
Query: 429 SQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRA-ARIYPDNYTFVSLLSACSKLCNL 487
QL D+ +W+ +I N E L+LF+ + + + P+ T ++++SAC++L +L
Sbjct: 239 DQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDL 298
Query: 488 ALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISA 547
G +H I +T+ S + + N LIDM+ KCG I ++ +IF+ M+ +++I+W ++++
Sbjct: 299 ETGRWVHDYITRTQKGHSVS-LNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNG 357
Query: 548 LGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEP 607
L L+G + AL +F M+ +PD + I VLTAC H GLV+EG +LF + YGV
Sbjct: 358 LALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRL 417
Query: 608 EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ +HY C+VDLL R G L EA + I MP P+ IW + L C+
Sbjct: 418 KSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACR 462
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 186/390 (47%), Gaps = 31/390 (7%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNE 154
SVF ++TWNS++ F + + E++ RS +F ++ G +
Sbjct: 33 SVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALL 92
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
+ + G+ +HG V+K +L + +L+NMY C + SA +F+ + R+ V W ++I
Sbjct: 93 LEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMI 152
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
++ +AL LY +M D P++ T ++++CA L++ +G +H+ + + ++
Sbjct: 153 SGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMK 212
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
+GSALV+ YAKC +L+ A F ++S+K++ +W+ALI GY + T L +
Sbjct: 213 ICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREV 272
Query: 335 QLG--YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
G RPNE T V+ + LG L T + D
Sbjct: 273 AGGSNMRPNEVTILAVISACAQ---------------------LGDLETGR----WVHD- 306
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
++T +V N + ++++ G + ++ + D++SWN ++ A +G
Sbjct: 307 --YITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLG 364
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACS 482
+E L F M+ + PD TF+ +L+ACS
Sbjct: 365 REALAQFHLMQTTDLQPDEITFIGVLTACS 394
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 219/445 (49%), Gaps = 22/445 (4%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE-PTQFTFGGLLS-CDSLNPVE-GAQL 61
+V+++NS++ A+ AL+ + M+ R P +FTF LL C L + G L
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V+K L +D ++ T LL +Y G L +FE M ++ V W S++S + K+
Sbjct: 102 HGQVVKYMLH-SDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHC 160
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+ + L+ ++ + E + ++ + +DL G ++H + + ++ ++
Sbjct: 161 PNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSA 220
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS-VDIVFP 240
LVNMY +C + +A ++F + +DV +W+ +I ++ +AL+L+ ++ + P
Sbjct: 221 LVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRP 280
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
N+ T + VI++CA L + G+ +H + + V + ++L+D ++KC +++ A F
Sbjct: 281 NEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIF 340
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLLQ 359
+S K+++SWN+++ G A L+Q +P+E TF VL + L+Q
Sbjct: 341 DSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQ 400
Query: 360 --------LHCLI-IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PRAVVPAN 409
+ L +R+ E+Y G ++ ++GL+++A F+ + + P + +
Sbjct: 401 EGKKLFYEIEALYGVRLKSEHY----GCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGS 456
Query: 410 IIAG--IYNRTGQYNETVKLLSQLE 432
++ +YN E + L +LE
Sbjct: 457 MLGACRVYNNLELGEEAARCLLELE 481
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 135/261 (51%), Gaps = 8/261 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M RN V + S+IS Y + +AL ++ M GF P + T L+S C L + G
Sbjct: 140 MGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVG 199
Query: 59 AQLQASVLKNGL-FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+L + + + + C A +G+AL+ +Y + G L VF+ + K + W++++ +
Sbjct: 200 MKLHSHIREMDMKIC--AVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYV 257
Query: 118 KHGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
K+ + + LF E+ S + E + + VI + DLE G +H + + + +
Sbjct: 258 KNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSV 317
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ NSL++M+ +C I +A+++F + +D++SWN+++ LA +AL + M
Sbjct: 318 SLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTT 377
Query: 237 IVFPNQTTFVYVINSC--AGL 255
+ P++ TF+ V+ +C AGL
Sbjct: 378 DLQPDEITFIGVLTACSHAGL 398
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/455 (30%), Positives = 239/455 (52%), Gaps = 14/455 (3%)
Query: 210 WNTIIGALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
+N +I L++SEN +A+ +Y + + + + TF+Y+ +C+ +++ + G+ H +V
Sbjct: 124 FNYLIRGLSQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKDVLHGQVFHVQV 183
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
+K +F+ ++L+ Y L A F ++ ++++VSWN+LI GY+ + +
Sbjct: 184 LKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQCNRFKEVL 243
Query: 329 LLIELL-QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRM------GYENYEYVLG-SLM 380
L L+ + + T V+ LA L ++ M + + + LG SL+
Sbjct: 244 DLFNLMREANVTADSVTMVKVI---LACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLI 300
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
Y + GL+ A + + +V N + Y G KL +++ +++SW
Sbjct: 301 DMYGRRGLVDLARRVFDRMQ-EKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWT 359
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
+I+ CA + L+LF+ M A + PD T S+LSACS L L G ++H + +
Sbjct: 360 CMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMCRH 419
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
+I SD +V N LIDMY KCG + ++++F++M ++ ++WT++I L +NGF E
Sbjct: 420 DI-KSDVYVGNALIDMYCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVNGFVDNVFEL 478
Query: 561 FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV 620
F +M G +P + I +L AC H GLV +G+E FE M YG+ PEM HY CVVDLL
Sbjct: 479 FSQMLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLS 538
Query: 621 RYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
R G L A + I MP P+ ++WR L C+ R
Sbjct: 539 RSGELDRAYEFIKQMPVVPDVVLWRILLSACKLHR 573
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 217/477 (45%), Gaps = 70/477 (14%)
Query: 9 FNSIISAYSRCGYVEDALRMFL-YMINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQASV 65
FN +I S+ +A+ M+ M N+G TF L +C + V G V
Sbjct: 124 FNYLIRGLSQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKDVLHGQVFHVQV 183
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
LK G F + F+ +L+ +YG G L VF+ M + LV+WNS++ + + ++
Sbjct: 184 LKLG-FGSYLFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQCNRFKEV 242
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
+ LF + + V + V VI S + + + + D ++ + NSL++M
Sbjct: 243 LDLFNLMREANVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDM 302
Query: 186 Y------------------------------FQCAG-IWSAEKMFKDVEIRDVVSWNTII 214
Y + AG + +A+K+F ++ IR+V+SW +I
Sbjct: 303 YGRRGLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMI 362
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
A++ AL+L+ M V P++ T V+++C+ L G+++H + ++ ++
Sbjct: 363 SGCAQANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDIK 422
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIEL 333
DV+VG+AL+D Y KC ++ A F ++ K+ VSW ++ILG A ++F L ++
Sbjct: 423 SDVYVGNALIDMYCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVNGFVDNVFELFSQM 482
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMG---YENYEYVLGSLMTSYAKSGLIS 390
L+ G +P +F +L L H ++ G +E+ E+V G L G +
Sbjct: 483 LRDGLQPTHGSFIGIL-------LACTHAGLVDKGLEYFESMEHVYG-LRPEMKHYGCVV 534
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
D L+ R+G+ + + + Q+ PD+V W I+++AC
Sbjct: 535 DLLS----------------------RSGELDRAYEFIKQMPVVPDVVLWRILLSAC 569
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 226/486 (46%), Gaps = 27/486 (5%)
Query: 98 FEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQD 156
F + + +L+ +N ++ + + + ++ +L+ ++ L ++ +F+ + S +D
Sbjct: 113 FIQIGQPTLLIFNYLIRGLSQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKD 172
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
+ G+ H V+K GF L + NSL+ MY + A+K+F ++ RD+VSWN++I
Sbjct: 173 VLHGQVFHVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICG 232
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
++ F + L+L+ M V + T V VI +C+ L + S+ + ++ D
Sbjct: 233 YSQCNRFKEVLDLFNLMREANVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDID 292
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL 336
V++G++L+D Y + ++ A F + KNIVSWNA++ GYA+ + L
Sbjct: 293 VYLGNSLIDMYGRRGLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLF----- 347
Query: 337 GYRPNEFTFSHVL----------RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
NE +V+ +++ L+L ++ + E + S++++ +
Sbjct: 348 ----NEMPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHL 403
Query: 387 GLISDALA---FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVI 443
GL+ ++ +I V N + +Y + G ++ +++ +++ D VSW +I
Sbjct: 404 GLLDTGQTVHEYMCRHDIKSDVYVGNALIDMYCKCGVVDKALEVFHDMKKKDSVSWTSMI 463
Query: 444 AACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII 503
A NG V ELF M + P + +F+ +L AC+ + G ++ +
Sbjct: 464 LGLAVNGFVDNVFELFSQMLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGL 523
Query: 504 SSDTFVCNMLIDMYGKCGSIGSSVKIFNEM-TDRNVITWTALISALGLNG---FAQRALE 559
+ ++D+ + G + + + +M +V+ W L+SA L+ A+ A
Sbjct: 524 RPEMKHYGCVVDLLSRSGELDRAYEFIKQMPVVPDVVLWRILLSACKLHRNLVLAEIATS 583
Query: 560 KFREME 565
K E++
Sbjct: 584 KLLELD 589
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 137/289 (47%), Gaps = 34/289 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGG-LLSCDSLNPVEGA 59
M DR++VS+NS+I YS+C ++ L +F M T +L+C L
Sbjct: 218 MDDRDLVSWNSLICGYSQCNRFKEVLDLFNLMREANVTADSVTMVKVILACSYLCEDGVV 277
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+++ D ++G +L+ +YGR G +D VF+ M K++V+WN++++ +
Sbjct: 278 DSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVFDRMQEKNIVSWNAMLTGYATA 337
Query: 120 G--------FVE-----------------------DCMFLFCELVRSEVALTESSFVGVI 148
G F E D + LF E++ + V E + V+
Sbjct: 338 GDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVL 397
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
S+ L+ G+ +H + ++ ++ V N+L++MY +C + A ++F D++ +D V
Sbjct: 398 SACSHLGLLDTGQTVHEYMCRHDIKSDVYVGNALIDMYCKCGVVDKALEVFHDMKKKDSV 457
Query: 209 SWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSC--AGL 255
SW ++I LA + EL+ +M D + P +F+ ++ +C AGL
Sbjct: 458 SWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSFIGILLACTHAGL 506
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 128/260 (49%), Gaps = 10/260 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP RNV+S+ +IS ++ DAL++F M++ +P + T +LS C L ++
Sbjct: 350 MPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTG 409
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q + +D +VG AL+ +Y + G +D+ + VF DM +K V+W S++ +
Sbjct: 410 QTVHEYMCRHDIKSDVYVGNALIDMYCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVN 469
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVI----HGLSNEQDLEFGEQIHGLVIKNGFDYE 175
GFV++ LF +++R + T SF+G++ H ++ LE+ E + + G E
Sbjct: 470 GFVDNVFELFSQMLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVY---GLRPE 526
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ +V++ + + A + K + + DVV W ++ A N A E+
Sbjct: 527 MKHYGCVVDLLSRSGELDRAYEFIKQMPVVPDVVLWRILLSACKLHRNLVLA-EIATSKL 585
Query: 235 VDIVFPNQTTFVYVINSCAG 254
+++ N +V + N+ AG
Sbjct: 586 LELDPSNSGNYVLLSNTYAG 605
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 10/225 (4%)
Query: 430 QLERPDIVSWNIVIAACAHNGDYKEVLELFK-YMRAARIYPDNYTFVSLLSACSKLCNLA 488
Q+ +P ++ +N +I + + + E + ++ M I DN TF+ L ACS++ ++
Sbjct: 115 QIGQPTLLIFNYLIRGLSQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKDVL 174
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
G H + K S F+ N LI MYG G +G + K+F++M DR++++W +LI
Sbjct: 175 HGQVFHVQVLKLGF-GSYLFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGY 233
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH---GGLVREGMELFERMNRSYGV 605
+ L+ F M D V ++ V+ AC + G+V ++ E + V
Sbjct: 234 SQCNRFKEVLDLFNLMREANVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKH----V 289
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ ++ + ++D+ R G + A ++ M N + W L G
Sbjct: 290 DIDVYLGNSLIDMYGRRGLVDLARRVFDRMQ-EKNIVSWNAMLTG 333
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,003,190,557
Number of Sequences: 23463169
Number of extensions: 403869428
Number of successful extensions: 1377906
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7379
Number of HSP's successfully gapped in prelim test: 3701
Number of HSP's that attempted gapping in prelim test: 1124685
Number of HSP's gapped (non-prelim): 84241
length of query: 667
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 518
effective length of database: 8,863,183,186
effective search space: 4591128890348
effective search space used: 4591128890348
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 80 (35.4 bits)