BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005969
(667 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WN01|PP286_ARATH Pentatricopeptide repeat-containing protein At3g58590
OS=Arabidopsis thaliana GN=At3g58590 PE=2 SV=2
Length = 741
Score = 740 bits (1911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/663 (55%), Positives = 476/663 (71%), Gaps = 1/663 (0%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+RN VSFN+II YS+ G V+ A +F M G+ P Q T GLLSC SL+ G Q
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQ 134
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L LK GLF ADAFVGT LL LYGR L+ VFEDMP KSL TWN ++S+ G G
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRG 194
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F+++CMF F ELVR +LTESSF+GV+ G+S +DL+ +Q+H K G D E+ V N
Sbjct: 195 FLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVN 254
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL++ Y +C AE+MF+D D+VSWN II A A+SEN KAL+L++ M P
Sbjct: 255 SLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSP 314
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
NQ T+V V+ + +Q G+ IH +IKN E + +G+AL+DFYAKC NLE + LCF
Sbjct: 315 NQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCF 374
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
I +KNIV WNAL+ GYA+K P + L +++LQ+G+RP E+TFS L+S +L QL
Sbjct: 375 DYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQL 434
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H +I+RMGYE+ +YVL SLM SYAK+ L++DAL + + P +VVP NI+AGIY+R GQ
Sbjct: 435 HSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQ 494
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
Y+E+VKL+S LE+PD VSWNI IAAC+ + ++EV+ELFK+M + I PD YTFVS+LS
Sbjct: 495 YHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSL 554
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
CSKLC+L LGSS+HGLI KT+ +DTFVCN+LIDMYGKCGSI S +K+F E ++N+IT
Sbjct: 555 CSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLIT 614
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
WTALIS LG++G+ Q ALEKF+E LGFKPDRV+ I++LTACRHGG+V+EGM LF++M
Sbjct: 615 WTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM- 673
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYD 660
+ YGVEPEMDHY C VDLL R G+LKEAE +I MPFP +A +WRTFL+GC R + +
Sbjct: 674 KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAEEQRN 733
Query: 661 TLN 663
TLN
Sbjct: 734 TLN 736
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/517 (23%), Positives = 248/517 (47%), Gaps = 20/517 (3%)
Query: 76 FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRS 135
+V ++ LY + G + VF+ MP ++ V++N+I+ + K+G V+ +F E+
Sbjct: 50 YVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF 109
Query: 136 EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELLVANSLVNMYFQCAGIWS 194
+S+ G++ S D+ G Q+HGL +K G F + V L+ +Y + +
Sbjct: 110 GYLPNQSTVSGLLSCAS--LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEM 167
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINSCA 253
AE++F+D+ + + +WN ++ L F K + R V + +++F+ V+ +
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGH-RGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+++ + K +H K L+C++ V ++L+ Y KC N A F + + +IVSWNA
Sbjct: 227 CVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNA 286
Query: 314 LILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMG 368
+I A +P ++ L + + + G+ PN+ T+ VL S QLL Q+H ++I+ G
Sbjct: 287 IICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 346
Query: 369 YENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET--VK 426
E + +L+ YAK G + D+ + V +++G N+ G + ++
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQ 406
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+L RP +++ + +C E+ +L + ++Y SL+ + +K N
Sbjct: 407 MLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK--N 460
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
+ +L L+ + N++ +Y + G SVK+ + + + ++W I+
Sbjct: 461 QLMNDAL--LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIA 518
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
A + + + +E F+ M +PD+ +++L+ C
Sbjct: 519 ACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLC 555
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 171/408 (41%), Gaps = 35/408 (8%)
Query: 246 VYVINSCAGLQNSILGKSIHAKVIK--NALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
V ++N C + K++HA I + L V+V + ++ Y K + A F ++
Sbjct: 16 VSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQM 75
Query: 304 SNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHC 362
+N VS+N +I GY+ + + E+ GY PN+ T S LL
Sbjct: 76 PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVS---------GLLSCAS 126
Query: 363 LIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYN 422
L +R G + + L K GL A AFV + +Y R
Sbjct: 127 LDVRAGTQLHGLSL--------KYGLFM-ADAFV-----------GTCLLCLYGRLDLLE 166
Query: 423 ETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACS 482
++ + + +WN +++ H G KE + F+ + +F+ +L S
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Query: 483 KLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWT 542
+ +L + LH K + + V N LI YGKCG+ + ++F + ++++W
Sbjct: 227 CVKDLDISKQLHCSATKKG-LDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWN 285
Query: 543 ALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRS 602
A+I A + +AL+ F M GF P++ ++VL L+ G ++ + ++
Sbjct: 286 AIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN 345
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G E + + ++D + G+L+++ ++ N + W L G
Sbjct: 346 -GCETGIVLGNALIDFYAKCGNLEDS-RLCFDYIRDKNIVCWNALLSG 391
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
N VSLL+ C K + A +LH L I ++ +VCN +I +Y K G + + K+
Sbjct: 12 NDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKV 71
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
F++M +RN +++ +I G +A F EM + G+ P++ + +L+ V
Sbjct: 72 FDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD--V 129
Query: 590 REGMELFERMNRSYGV-EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
R G +L ++ YG+ + C++ L R L+ AE++ MPF
Sbjct: 130 RAGTQL-HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPF 177
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 349 bits (896), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 206/660 (31%), Positives = 342/660 (51%), Gaps = 41/660 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSL--NPVEG 58
M +VV++N +IS + + G A+ F M + T+ T G +LS + N G
Sbjct: 287 MSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A +K GL ++ +VG++L+ +Y + ++ VFE + K+ V WN+++ +
Sbjct: 347 LVVHAEAIKLGL-ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G M LF ++ S + + +F ++ + DLE G Q H ++IK L V
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFV 465
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LV+MY +C + A ++F+ + RD V+WNTIIG+ + EN +A +L+ RM++ +
Sbjct: 466 GNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGI 525
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
+ + +C + GK +H +K L+ D+ GS+L+D Y+KC ++ A
Sbjct: 526 VSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARK 585
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
FS + ++VS NALI GY+ + ++ L E+L G P+E TF+ ++ + + L
Sbjct: 586 VFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESL 645
Query: 359 ----QLHCLIIRMGYENY-EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q H I + G+ + EY+ SL+ Y S +++A A + L+ P++
Sbjct: 646 TLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS--------- 696
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
IV W +++ + NG Y+E L+ +K MR + PD T
Sbjct: 697 ----------------------IVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQAT 734
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
FV++L CS L +L G ++H LI D N LIDMY KCG + S ++F+EM
Sbjct: 735 FVTVLRVCSVLSSLREGRAIHSLIFHL-AHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Query: 534 TDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
R NV++W +LI+ NG+A+ AL+ F M PD + + VLTAC H G V +G
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDG 853
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
++FE M YG+E +DH C+VDLL R+G+L+EA+ I P+A +W + L C+
Sbjct: 854 RKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACR 913
Score = 236 bits (603), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 184/723 (25%), Positives = 319/723 (44%), Gaps = 111/723 (15%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
+++V ++NS++S YS G LR F+ + P +FTF +LS C VE G Q
Sbjct: 122 EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQ 181
Query: 61 LQASVLKNGL----FCADAFVG--------------------------TALLGLYGRHGC 90
+ S++K GL +C A V T L Y + G
Sbjct: 182 IHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGL 241
Query: 91 LDEVVSVFE-----------------------------------DMPRKSLVTWNSIVSI 115
+E V VFE +M +V WN ++S
Sbjct: 242 PEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISG 301
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
GK G + F + +S V T S+ V+ + +L+ G +H IK G
Sbjct: 302 HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V +SLV+MY +C + +A K+F+ +E ++ V WN +I A + K +EL++ M
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ TF ++++CA + +G H+ +IK L ++FVG+ALVD YAKC LE
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLA 354
A F + +++ V+WN +I Y + + F L + + L G + + L++
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTH 541
Query: 355 ----FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+Q Q+HCL ++ G + + SL+ Y+K G+I DA
Sbjct: 542 VHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDAR----------------- 584
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
K+ S L +VS N +IA + N + +E + LF+ M + P
Sbjct: 585 ---------------KVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPS 628
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF +++ AC K +L LG+ HG I K S ++ L+ MY + + +F
Sbjct: 629 EITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALF 688
Query: 531 NEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLV 589
+E++ ++++ WT ++S NGF + AL+ ++EM G PD+ + VL C +
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSL 748
Query: 590 REGMELFERMNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
REG + + + + ++D + ++D+ + G +K + ++ M N + W +
Sbjct: 749 REGRAIHSLI---FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSL 805
Query: 648 LEG 650
+ G
Sbjct: 806 ING 808
Score = 230 bits (587), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 151/530 (28%), Positives = 260/530 (49%), Gaps = 46/530 (8%)
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L G+ +H + G D E + N++V++Y +CA + AEK F +E +DV +WN+++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECD 276
+ GK L ++ + + +FPN+ TF V+++CA N G+ IH +IK LE +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 277 VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ- 335
+ G ALVD YAKCD + A F I + N V W L GY P L+ E ++
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 336 LGYRPNEFTFSHVLRSSLAFQLLQ----------------LHCLIIRMGYENYEYVL--- 376
G+RP+ F V+ + + L+ + +I G E V
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEY 314
Query: 377 ------GSLMTSYAKSGLISDALAFVTALNIPRAV--------VPANIIAG-----IYNR 417
S+ ++ + G + A+ V L++ V + +NI G +Y++
Sbjct: 315 FFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
+ K+ LE + V WN +I AHNG+ +V+ELF M+++ D++TF SL
Sbjct: 375 CEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSL 434
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
LS C+ +L +GS H +I K + ++ + FV N L+DMY KCG++ + +IF M DR+
Sbjct: 435 LSTCAASHDLEMGSQFHSIIIKKK-LAKNLFVGNALVDMYAKCGALEDARQIFERMCDRD 493
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
+TW +I + + A + F+ M G D L + L AC H + +G ++
Sbjct: 494 NVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV-H 552
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP----FPPNALI 643
++ G++ ++ ++D+ + G +K+A K+ +++P NALI
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALI 602
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/464 (25%), Positives = 220/464 (47%), Gaps = 48/464 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPV-EG 58
M DR+ V++N+II +Y + +A +F M G L +C ++ + +G
Sbjct: 489 MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG 548
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ +K GL D G++L+ +Y + G + + VF +P S+V+ N++++ + +
Sbjct: 549 KQVHCLSVKCGLD-RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ 607
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE-LL 177
+ +E+ + LF E++ V +E +F ++ + L G Q HG + K GF E
Sbjct: 608 NN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEY 666
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ SL+ MY G+ A +F ++ + +V W ++ +++ + +AL+ Y M D
Sbjct: 667 LGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD 726
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+Q TFV V+ C+ L + G++IH+ + A + D + L+D YAKC +++G+
Sbjct: 727 GVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGS 786
Query: 297 HLCFSEISNK-NIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTF-------SH 347
F E+ + N+VSWN+LI GYA + ++ + + Q P+E TF SH
Sbjct: 787 SQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSH 846
Query: 348 VLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
+ S ++ ++ +I + G E + ++ + G + +A F+ A N+
Sbjct: 847 AGKVSDGRKIFEM--MIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNL------ 898
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
+PD W+ ++ AC +GD
Sbjct: 899 -------------------------KPDARLWSSLLGACRIHGD 917
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 198/429 (46%), Gaps = 45/429 (10%)
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA 319
+GK++H+K + ++ + +G+A+VD YAKC + A F + K++ +WN+++ Y+
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYS 136
Query: 320 SKSSPTSIFL-LIELLQLGYRPNEFTFSHVLRSSLAFQL-----LQLHCLIIRMGYENYE 373
S P + + L + PN+FTFS VL S+ A + Q+HC +I+MG E
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVL-STCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG-------------------- 413
Y G+L+ YAK ISDA + P V + +G
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 414 --------------IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
Y R G+ + L ++ PD+V+WN++I+ G +E F
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
MR + + T S+LSA + NL LG +H K ++S+ +V + L+ MY K
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG-LASNIYVGSSLVSMYSK 374
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
C + ++ K+F + ++N + W A+I NG + + +E F +M+ G+ D ++
Sbjct: 375 CEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSL 434
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
L+ C + G + F + + + + +VD+ + G L++A +I M
Sbjct: 435 LSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRD 493
Query: 640 NALIWRTFL 648
N + W T +
Sbjct: 494 N-VTWNTII 501
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 338 bits (867), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 204/647 (31%), Positives = 335/647 (51%), Gaps = 33/647 (5%)
Query: 8 SFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQASV 65
S+ ++IS S+ +A+R+F M G PT + F +LS C + +E G QL V
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 66 LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDC 125
LK G F +D +V AL+ LY G L +F +M ++ VT+N++++ + G+ E
Sbjct: 315 LKLG-FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 126 MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
M LF + + ++ ++ S + L G+Q+H K GF + +L+N+
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +CA I +A F + E+ +VV WN ++ A ++ + ++ +M ++ + PNQ T+
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
++ +C L + LG+ IH+++IK + + +V S L+D YAK L+ A +
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Query: 306 KNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
K++VSW +I GY + ++ ++L G R +E ++ + + Q L
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL------ 607
Query: 365 IRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNET 424
+ G + + SG SD L F AL +Y+R G+ E+
Sbjct: 608 -KEGQQ--------IHAQACVSGFSSD-LPFQNAL------------VTLYSRCGKIEES 645
Query: 425 VKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKL 484
Q E D ++WN +++ +G+ +E L +F M I +N+TF S + A S+
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 485 CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTAL 544
N+ G +H +I KT S+T VCN LI MY KCGSI + K F E++ +N ++W A+
Sbjct: 706 ANMKQGKQVHAVITKTGY-DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAI 764
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I+A +GF AL+ F +M +P+ V L+ VL+AC H GLV +G+ FE MN YG
Sbjct: 765 INAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYG 824
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ P+ +HY CVVD+L R G L A++ I MP P+AL+WRT L C
Sbjct: 825 LSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSAC 871
Score = 228 bits (582), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 165/640 (25%), Positives = 296/640 (46%), Gaps = 47/640 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCD----SLNP 55
MP+R + ++N +I + + + +F+ M++ P + TF G+L +C + +
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 205
Query: 56 VEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
VE Q+ A +L GL + V L+ LY R+G +D VF+ + K +W +++S
Sbjct: 206 VE--QIHARILYQGLRDS-TVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG 262
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
K+ + + LFC++ + T +F V+ + LE GEQ+HGLV+K GF +
Sbjct: 263 LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSD 322
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V N+LV++YF + SAE +F ++ RD V++NT+I L++ KA+EL+ RM +
Sbjct: 323 TYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL 382
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D + P+ T ++ +C+ G+ +HA K + + AL++ YAKC ++E
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLA 354
A F E +N+V WN +++ Y + F + +Q+ PN++T+ +L++ +
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
L Q+H II+ ++ YV L+ YAK G + A
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW----------------- 545
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
+L + D+VSW +IA + L F+ M I D
Sbjct: 546 ---------------DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ +SAC+ L L G +H + SSD N L+ +Y +CG I S F
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGF-SSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ + I W AL+S +G + AL F M G + + + A ++
Sbjct: 650 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
+G ++ + ++ G + E + + ++ + + G + +AEK
Sbjct: 710 QGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEK 748
Score = 226 bits (576), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 162/629 (25%), Positives = 285/629 (45%), Gaps = 45/629 (7%)
Query: 34 NRGFEPTQFTFGGLLS-CDSLNPV--EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGC 90
NRG P T LL C N EG +L + +LK GL ++ + L Y G
Sbjct: 77 NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGL-DSNGCLSEKLFDFYLFKGD 135
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG 150
L VF++MP +++ TWN ++ + + LF +V V E +F GV+
Sbjct: 136 LYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA 195
Query: 151 LSNEQ-DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
+ EQIH ++ G +V N L+++Y + + A ++F + ++D S
Sbjct: 196 CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
W +I L+++E +A+ L+ M V + P F V+++C +++ +G+ +H V+
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFL 329
K D +V +ALV Y NL A FS +S ++ V++N LI G +
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375
Query: 330 LIELLQL-GYRPNEFTFSHVLRSSLA----FQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
L + + L G P+ T + ++ + A F+ QLH ++G+ + + G+L+ YA
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIA 444
K I AL + + E ++V WN+++
Sbjct: 436 KCADIETALDYFL--------------------------------ETEVENVVLWNVMLV 463
Query: 445 ACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIIS 504
A D + +F+ M+ I P+ YT+ S+L C +L +L LG +H I KT
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF-Q 522
Query: 505 SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM 564
+ +VC++LIDMY K G + ++ I ++V++WT +I+ F +AL FR+M
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 582
Query: 565 EFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGH 624
G + D V L ++AC ++EG ++ + S G ++ + +V L R G
Sbjct: 583 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSRCGK 641
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEGCQR 653
++E+ N + W + G Q+
Sbjct: 642 IEESYLAFEQTEAGDN-IAWNALVSGFQQ 669
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 156/623 (25%), Positives = 287/623 (46%), Gaps = 57/623 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
M R+ V++N++I+ S+CGY E A+ +F M G EP T L+ S + G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL A K G F ++ + ALL LY + ++ + F + +++V WN ++ +G
Sbjct: 409 QQLHAYTTKLG-FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ + +F ++ E+ + ++ ++ DLE GEQIH +IK F V
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+ L++MY + + +A + +DVVSW T+I + KAL + +M +
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
++ +++CAGLQ G+ IHA+ + D+ +ALV Y++C +E ++L
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 299 CFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF-- 355
F + + ++WNAL+ G+ S ++ ++ + + + + G N FTF ++++
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707
Query: 356 --QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
Q Q+H +I + GY++ V +L++ YAK G ISDA
Sbjct: 708 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA--------------------- 746
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
K ++ + VSWN +I A + +G E L+ F M + + P++ T
Sbjct: 747 -----------EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVT 795
Query: 474 FVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
V +LSACS + + G +S +GL K E +VC ++DM + G + +
Sbjct: 796 LVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE-----HYVC--VVDMLTRAGLLSRA 848
Query: 527 VKIFNEMTDR-NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ EM + + + W L+SA ++ + +F L +P+ A +L+
Sbjct: 849 KEFIQEMPIKPDALVWRTLLSACVVH--KNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 906
Query: 586 GGLVREGMELFERMNRSYGVEPE 608
+ +L + + GV+ E
Sbjct: 907 VSKKWDARDLTRQKMKEKGVKKE 929
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 203/652 (31%), Positives = 345/652 (52%), Gaps = 30/652 (4%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ 60
P +NV +NSII A+S+ G +AL + + P ++TF ++ +C L E
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L + + F +D FVG AL+ +Y R G L VF++MP + LV+WNS++S + HG
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ E+ + ++ EL S + + V+ N ++ G+ +HG +K+G + ++V N
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
LV MY + A ++F ++++RD VS+NT+I + E +++ ++L ++D P
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKP 305
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T V+ +C L++ L K I+ ++K + V + L+D YAKC ++ A F
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
+ + K+ VSWN++I GY L+E ++L F ++ A + L
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGD------LMEAMKL------FKMMMIMEEQ-ADHITYL 412
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
+ + + ++ G L ++ KSG+ D + +N + +Y + G+
Sbjct: 413 MLISVSTRLADLKFGKG-LHSNGIKSGICID-------------LSVSNALIDMYAKCGE 458
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+++K+ S + D V+WN VI+AC GD+ L++ MR + + PD TF+ L
Sbjct: 459 VGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPM 518
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C+ L LG +H + + S+ + N LI+MY KCG + +S ++F M+ R+V+T
Sbjct: 519 CASLAAKRLGKEIHCCLLRFGY-ESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVT 577
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
WT +I A G+ G ++ALE F +ME G PD V IA++ AC H GLV EG+ FE+M
Sbjct: 578 WTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMK 637
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y ++P ++HY CVVDLL R + +AE+ I MP P+A IW + L C+
Sbjct: 638 THYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACR 689
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 165/598 (27%), Positives = 282/598 (47%), Gaps = 36/598 (6%)
Query: 40 TQFTFGGLLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE 99
+ F L S +LN E ++ A V+ GL +D F G L+ Y +SVF
Sbjct: 7 SPFISRALSSSSNLN--ELRRIHALVISLGLDSSDFFSGK-LIDKYSHFREPASSLSVFR 63
Query: 100 DM-PRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLE 158
+ P K++ WNSI+ F K+G + + + +L S+V+ + +F VI + D E
Sbjct: 64 RVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE 123
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
G+ ++ ++ GF+ +L V N+LV+MY + + A ++F ++ +RD+VSWN++I +
Sbjct: 124 MGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYS 183
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ +ALE+Y + + P+ T V+ + L G+ +H +K+ + V
Sbjct: 184 SHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVV 243
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLG 337
V + LV Y K A F E+ ++ VS+N +I GY + S+ + +E L
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-Q 302
Query: 338 YRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
++P+ T S VLR+ + L L I Y Y+L K+G + ++
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYI-------YNYML--------KAGFVLESTV--- 344
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
NI+ +Y + G + + +E D VSWN +I+ +GD E ++
Sbjct: 345 ----------RNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMK 394
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
LFK M D+ T++ L+S ++L +L G LH K+ I D V N LIDMY
Sbjct: 395 LFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGIC-IDLSVSNALIDMY 453
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
KCG +G S+KIF+ M + +TW +ISA G L+ +M PD +
Sbjct: 454 AKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFL 513
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
L C R G E+ + R +G E E+ + ++++ + G L+ + ++ M
Sbjct: 514 VTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFERM 570
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 225/443 (50%), Gaps = 21/443 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M R+ VS+N++I Y + VE+++RMFL +++ F+P T +L +C L + A
Sbjct: 268 MDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLA 326
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + + F ++ V L+ +Y + G + VF M K V+WNSI+S + +
Sbjct: 327 KYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQS 386
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + + M LF ++ E +++ +I + DL+FG+ +H IK+G +L V+
Sbjct: 387 GDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVS 446
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N+L++MY +C + + K+F + D V+WNT+I A +F L++ +M V
Sbjct: 447 NALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVV 506
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ TF+ + CA L LGK IH +++ E ++ +G+AL++ Y+KC LE +
Sbjct: 507 PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRV 566
Query: 300 FSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTF---------SHVL 349
F +S +++V+W +I Y ++ ++ + G P+ F S ++
Sbjct: 567 FERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLV 626
Query: 350 RSSLA-FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PRAVVP 407
LA F+ ++ H I M E+Y V+ L ++S IS A F+ A+ I P A +
Sbjct: 627 DEGLACFEKMKTHYKIDPM-IEHYACVVDLL----SRSQKISKAEEFIQAMPIKPDASIW 681
Query: 408 ANIIAGIYNRTGQYNETVKLLSQ 430
A+++ RT ET + +S+
Sbjct: 682 ASVLRAC--RTSGDMETAERVSR 702
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 154/610 (25%), Positives = 277/610 (45%), Gaps = 83/610 (13%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEG 58
MP R++VS+NS+IS YS GY E+AL ++ + N P FT +L + L +G
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L LK+G+ V L+ +Y + + VF++M + V++N+++ + K
Sbjct: 227 QGLHGFALKSGVNSV-VVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLK 285
Query: 119 HGFVEDCMFLFCELVRS--EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
VE+ + +F E + LT SS V+ + +DL + I+ ++K GF E
Sbjct: 286 LEMVEESVRMFLENLDQFKPDLLTVSS---VLRACGHLRDLSLAKYIYNYMLKAGFVLES 342
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V N L+++Y +C + +A +F +E +D VSWN+II +S + +A++L+ M +
Sbjct: 343 TVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIM 402
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ T++ +I+ L + GK +H+ IK+ + D+ V +AL+D YAKC + +
Sbjct: 403 EEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS 462
Query: 297 HLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLR--SSL 353
FS + + V+WN +I T + + ++ + P+ TF L +SL
Sbjct: 463 LKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASL 522
Query: 354 AFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
A + L ++HC ++R GYE+ + +L+ Y+K G + +
Sbjct: 523 AAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLEN-------------------- 562
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+ ++ ++ R D+V+W +I A G+ ++ LE F M + I PD+
Sbjct: 563 ------------SSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDS 610
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
F++++ ACS GL+ + C + + K
Sbjct: 611 VVFIAIIYACSH----------SGLV-------DEGLACFEKMKTHYK------------ 641
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
D + + ++ L + +A E + M KPD +VL ACR G
Sbjct: 642 --IDPMIEHYACVVDLLSRSQKISKAEEFIQAMP---IKPDASIWASVLRACRTSG---- 692
Query: 592 GMELFERMNR 601
ME ER++R
Sbjct: 693 DMETAERVSR 702
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 6/173 (3%)
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD-RNV 538
A S NL +H L+ + SSD F LID Y SS+ +F ++ +NV
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSD-FFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM-ELFE 597
W ++I A NG ALE + ++ PD+ +V+ AC GL M +L
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMGDLVY 129
Query: 598 RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G E ++ + +VD+ R G L A ++ MP + + W + + G
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV-RDLVSWNSLISG 181
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 322 bits (826), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 195/659 (29%), Positives = 333/659 (50%), Gaps = 45/659 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-----CDSLNPV 56
P R+ S+ S++ +SR G ++A R+FL + G E F +L CD L
Sbjct: 54 PGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELF-- 111
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
G QL +K G F D VGT+L+ Y + + VF++M +++VTW +++S +
Sbjct: 112 -GRQLHCQCIKFG-FLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGY 169
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ ++ + LF + +F + L+ E G Q+H +V+KNG D +
Sbjct: 170 ARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 229
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
V+NSL+N+Y +C + A +F E++ VV+WN++I A + +AL ++ M ++
Sbjct: 230 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 289
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V ++++F VI CA L+ + +H V+K D + +AL+ Y+KC + A
Sbjct: 290 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 297 HLCFSEIS-NKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLA 354
F EI N+VSW A+I G+ + ++ L E+ + G RPNEFT+S +L +
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV 409
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
++H +++ YE V +L+ +Y K
Sbjct: 410 ISPSEVHAQVVKTNYERSSTVGTALLDAYVK----------------------------- 440
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
G+ E K+ S ++ DIV+W+ ++A A G+ + +++F + I P+ +TF
Sbjct: 441 ---LGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTF 497
Query: 475 VSLLSACSKL-CNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
S+L+ C+ ++ G HG K+ + SS V + L+ MY K G+I S+ ++F
Sbjct: 498 SSILNVCAATNASMGQGKQFHGFAIKSRLDSS-LCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++++++W ++IS +G A +AL+ F+EM+ K D V I V AC H GLV EG
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ F+ M R + P +H C+VDL R G L++A K+I MP P + IWRT L C+
Sbjct: 617 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACR 675
Score = 236 bits (603), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 173/619 (27%), Positives = 309/619 (49%), Gaps = 51/619 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
M +RNVV++ ++IS Y+R ++ L +F+ M N G +P FTF L + V G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ V+KNGL V +L+ LY + G + + +F+ KS+VTWNS++S +
Sbjct: 214 LQVHTVVVKNGL-DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G + + +F + + V L+ESSF VI +N ++L F EQ+H V+K GF ++ +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVE-IRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+L+ Y +C + A ++FK++ + +VVSW +I +++ +A++L+ M
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN+ T+ ++ + + S +HA+V+K E VG+AL+D Y K +E A
Sbjct: 393 VRPNEFTYSVILTALPVISPS----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448
Query: 298 LCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF- 355
FS I +K+IV+W+A++ GYA + + +I + EL + G +PNEFTFS +L A
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Query: 356 ----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
Q Q H I+ ++ V +L+T YAK G I A
Sbjct: 509 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESA------------------- 549
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++ R Q E+ D+VSWN +I+ A +G + L++FK M+ ++ D
Sbjct: 550 EEVFKR------------QREK-DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+ + +AC+ + G ++ + I+ + ++D+Y + G + ++K+
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Query: 532 EMTDRNVIT-WTALISALGLNGFAQRALEKFREMEFLGFKP-DRVALIAVLTACRHGGLV 589
M + T W +++A ++ + L + + + KP D A + + G
Sbjct: 657 NMPNPAGSTIWRTILAACRVH--KKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDW 714
Query: 590 REGMELFERMN-RSYGVEP 607
+E ++ + MN R+ EP
Sbjct: 715 QERAKVRKLMNERNVKKEP 733
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/564 (23%), Positives = 258/564 (45%), Gaps = 50/564 (8%)
Query: 96 SVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQ 155
++F+ P + ++ S++ F + G ++ LF + R + + S F V+ +
Sbjct: 48 NLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLC 107
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
D FG Q+H IK GF ++ V SLV+ Y + + K+F +++ R+VV+W T+I
Sbjct: 108 DELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLIS 167
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
A + + L L++RM + PN TF + A G +H V+KN L+
Sbjct: 168 GYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDK 227
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ 335
+ V ++L++ Y KC N+ A + F + K++V+WN++I GYA+ + ++
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 336 LGY-RPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLIS 390
L Y R +E +F+ V++ + L QLHC +++ G+ + + +LM +Y+K +
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML 347
Query: 391 DALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNG 450
DAL + V VSW +I+ N
Sbjct: 348 DALRLFKEIGCVGNV-------------------------------VSWTAMISGFLQND 376
Query: 451 DYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC 510
+E ++LF M+ + P+ +T+ +L+A + S +H + KT S T V
Sbjct: 377 GKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSST-VG 431
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFK 570
L+D Y K G + + K+F+ + D++++ W+A+++ G + A++ F E+ G K
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 491
Query: 571 PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLV----RYGHLK 626
P+ ++L C + F + ++ +D CV L+ + G+++
Sbjct: 492 PNEFTFSSILNVCAATNASMGQGKQFH----GFAIKSRLDSSLCVSSALLTMYAKKGNIE 547
Query: 627 EAEKIITTMPFPPNALIWRTFLEG 650
AE++ + + W + + G
Sbjct: 548 SAEEVFKRQR-EKDLVSWNSMISG 570
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 322 bits (824), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 195/656 (29%), Positives = 351/656 (53%), Gaps = 42/656 (6%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ-LQ 62
++ +NSIIS++ R G + AL + M+ G P TF L+ +C +L +G L
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLS 161
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+V G+ C + FV ++L+ Y +G +D +F+ + +K V WN +++ + K G +
Sbjct: 162 DTVSSLGMDC-NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ + F + +++ +F V+ +++ ++ G Q+HGLV+ +G D+E + NSL
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
++MY +C A K+F+ + D V+WN +I +S ++L + M V P+
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
TF ++ S + +N K IH ++++++ D+F+ SAL+D Y KC + A FS+
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400
Query: 303 ISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS---LAFQL- 357
++ ++V + A+I GY S+ + L+++ PNE T +L LA +L
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG 460
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
+LH II+ G++N NI AV+ +Y +
Sbjct: 461 RELHGFIIKKGFDN--------------------------RCNIGCAVI------DMYAK 488
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSL 477
G+ N ++ +L + DIVSWN +I CA + + +++F+ M + I D + +
Sbjct: 489 CGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAA 548
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
LSAC+ L + + G ++HG + K + +SD + + LIDMY KCG++ +++ +F M ++N
Sbjct: 549 LSACANLPSESFGKAIHGFMIKHSL-ASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKN 607
Query: 538 VITWTALISALGLNGFAQRALEKFREM-EFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+++W ++I+A G +G + +L F EM E G +PD++ + ++++C H G V EG+ F
Sbjct: 608 IVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFF 667
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M YG++P+ +HY CVVDL R G L EA + + +MPFPP+A +W T L C+
Sbjct: 668 RSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACR 723
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 159/616 (25%), Positives = 286/616 (46%), Gaps = 50/616 (8%)
Query: 47 LLSCDSLNPV-EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE--DMPR 103
L +C + N + +G Q+ A ++ N + D++ +LG+Y G + +F D+ R
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSI-SGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 104 KSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIH---GLSNEQDLEFG 160
S+ WNSI+S F ++G + + + +++ V+ S+F ++ L N + ++F
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF- 159
Query: 161 EQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES 220
+ V G D VA+SL+ Y + I K+F V +D V WN ++ A+
Sbjct: 160 --LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 221 ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
++ + M +D + PN TF V++ CA LG +H V+ + ++ + +
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYR 339
++L+ Y+KC + A F +S + V+WN +I GY S S+ E++ G
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 340 PNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
P+ TFS +L S F+ L Q+HC I+R ++ +L+ +Y K +S
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVS----- 392
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
A NI SQ D+V + +I+ HNG Y +
Sbjct: 393 -MAQNI--------------------------FSQCNSVDVVVFTAMISGYLHNGLYIDS 425
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
LE+F+++ +I P+ T VS+L L L LG LHG I K + C +ID
Sbjct: 426 LEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGC-AVID 484
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
MY KCG + + +IF ++ R++++W ++I+ + A++ FR+M G D V+
Sbjct: 485 MYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVS 544
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+ A L+AC + G + M + + + ++ ++D+ + G+LK A + TM
Sbjct: 545 ISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM 603
Query: 636 PFPPNALIWRTFLEGC 651
N + W + + C
Sbjct: 604 K-EKNIVSWNSIIAAC 618
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 134/569 (23%), Positives = 268/569 (47%), Gaps = 35/569 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
++ V +N +++ Y++CG ++ ++ F M P TF +LS C S ++ G QL
Sbjct: 202 KDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 261
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V+ +G+ + + +LL +Y + G D+ +F M R VTWN ++S + + G
Sbjct: 262 HGLVVVSGVD-FEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGL 320
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
+E+ + F E++ S V +F ++ +S ++LE+ +QIH ++++ ++ + ++
Sbjct: 321 MEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSA 380
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
L++ YF+C G+ A+ +F DVV + +I + + +LE++ + + PN
Sbjct: 381 LIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPN 440
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
+ T V ++ L LG+ +H +IK + +G A++D YAKC + A+ F
Sbjct: 441 EITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE 500
Query: 302 EISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
+S ++IVSWN++I A +P++ + Q+G S + ++
Sbjct: 501 RLSKRDIVSWNSMITRCAQSDNPSAAIDIFR--QMG-------VSGICYDCVSISAALSA 551
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
C + E++ + M K L SD + T ++ +Y + G
Sbjct: 552 C--ANLPSESFGKAIHGFMI---KHSLASDVYSESTLID-------------MYAKCGNL 593
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSA 480
+ + ++ +IVSWN +IAAC ++G K+ L LF M + I PD TF+ ++S+
Sbjct: 594 KAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISS 653
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVI 539
C + ++ G + + I ++D++G+ G + + + M +
Sbjct: 654 CCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAG 713
Query: 540 TWTALISALGLNG---FAQRALEKFREME 565
W L+ A L+ A+ A K +++
Sbjct: 714 VWGTLLGACRLHKNVELAEVASSKLMDLD 742
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 195/357 (54%), Gaps = 9/357 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEG-- 58
M + V++N +IS Y + G +E++L F MI+ G P TF LL S++ E
Sbjct: 300 MSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLP--SVSKFENLE 357
Query: 59 --AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
Q+ ++++ + D F+ +AL+ Y + + ++F +V + +++S +
Sbjct: 358 YCKQIHCYIMRHSI-SLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGY 416
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+G D + +F LV+ +++ E + V ++ + L+ G ++HG +IK GFD
Sbjct: 417 LHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRC 476
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ ++++MY +C + A ++F+ + RD+VSWN++I A+S+N A++++ +M V
Sbjct: 477 NIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS 536
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ + + +++CA L + GK+IH +IK++L DV+ S L+D YAKC NL+ A
Sbjct: 537 GICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAA 596
Query: 297 HLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQL-GYRPNEFTFSHVLRS 351
F + KNIVSWN++I + S+ L E+++ G RP++ TF ++ S
Sbjct: 597 MNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISS 653
Score = 162 bits (411), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 231/516 (44%), Gaps = 46/516 (8%)
Query: 147 VIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR- 205
++ SN L G+Q+H +I N + ++ MY C KMF +++R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 206 -DVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
+ WN+II + + +AL Y +M V P+ +TF ++ +C L+N +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
V ++C+ FV S+L+ Y + ++ F + K+ V WN ++ GYA +
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 325 TSI---FLLIELLQLGYRPNEFTFSHVLR---SSLAFQL-LQLHCLIIRMGYENYEYVLG 377
S+ F ++ + Q+ PN TF VL S L L +QLH L++ G + +
Sbjct: 221 DSVIKGFSVMRMDQIS--PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
SL++ Y+K G++++ KL + R D V
Sbjct: 279 SLLSMYSK--------------------------------CGRFDDASKLFRMMSRADTV 306
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
+WN +I+ +G +E L F M ++ + PD TF SLL + SK NL +H I
Sbjct: 307 TWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYI 366
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
+ IS D F+ + LID Y KC + + IF++ +V+ +TA+IS NG +
Sbjct: 367 MRHS-ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDS 425
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
LE FR + + P+ + L+++L ++ G EL + + G + + V+D
Sbjct: 426 LEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK-GFDNRCNIGCAVID 484
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
+ + G + A +I + + + W + + C +
Sbjct: 485 MYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQ 519
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 207/664 (31%), Positives = 336/664 (50%), Gaps = 45/664 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG--A 59
+N VS+NSIIS YS+ G A R+F M G PT++TFG L++ C P
Sbjct: 169 KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE 228
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ ++ K+GL D FVG+ L+ + + G L VF M ++ VT N ++ +
Sbjct: 229 QIMCTIQKSGLL-TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQ 287
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVI-----HGLSNEQDLEFGEQIHGLVIKNGF-D 173
+ E+ LF ++ S + ++ S+V ++ + L+ E L+ G ++HG VI G D
Sbjct: 288 KWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVD 346
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ + + N LVNMY +C I A ++F + +D VSWN++I L ++ F +A+E Y M
Sbjct: 347 FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ P T + ++SCA L+ + LG+ IH + +K ++ +V V +AL+ YA+ L
Sbjct: 407 RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYL 466
Query: 294 EGAHLCFSEISNKNIVSWNALI--LGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
FS + + VSWN++I L + +S P ++ + + G + N TFS VL +
Sbjct: 467 NECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSA 526
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ +L I + +N NI N +
Sbjct: 527 VSSLSFGELGKQIHGLALKN----------------------------NIADEATTENAL 558
Query: 412 AGIYNRTGQYNETVKLLSQL-ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
Y + G+ + K+ S++ ER D V+WN +I+ HN + L+L +M D
Sbjct: 559 IACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLD 618
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
++ + ++LSA + + L G +H + + SD V + L+DMY KCG + +++ F
Sbjct: 619 SFMYATVLSAFASVATLERGMEVHACSVRA-CLESDVVVGSALVDMYSKCGRLDYALRFF 677
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG-FKPDRVALIAVLTACRHGGLV 589
N M RN +W ++IS +G + AL+ F M+ G PD V + VL+AC H GL+
Sbjct: 678 NTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLL 737
Query: 590 REGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
EG + FE M+ SYG+ P ++H+ C+ D+L R G L + E I MP PN LIWRT L
Sbjct: 738 EEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLG 797
Query: 650 GCQR 653
C R
Sbjct: 798 ACCR 801
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 185/675 (27%), Positives = 300/675 (44%), Gaps = 61/675 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-- 57
MP RN VS+ I+S YSR G ++AL M+ G Q+ F +L +C + V
Sbjct: 62 MPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGIL 121
Query: 58 -GAQLQASVLKNGLFCADAFVGTALLGLYGRH-GCLDEVVSVFEDMPRKSLVTWNSIVSI 115
G Q+ + K + DA V L+ +Y + G + + F D+ K+ V+WNSI+S+
Sbjct: 122 FGRQIHGLMFKLS-YAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISV 180
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN--EQDLEFGEQIHGLVIKNGFD 173
+ + G +F + TE +F ++ + E D+ EQI + K+G
Sbjct: 181 YSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLL 240
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+L V + LV+ + + + A K+F +E R+ V+ N ++ L + +A +L++ M
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Query: 234 SVDIVFPNQTTFV-------YVINSCAGLQNSILGKSIHAKVIKNAL-ECDVFVGSALVD 285
+ I ++ + Y + GL+ G+ +H VI L + V +G+ LV+
Sbjct: 301 NSMIDVSPESYVILLSSFPEYSLAEEVGLKK---GREVHGHVITTGLVDFMVGIGNGLVN 357
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFT 344
YAKC ++ A F +++K+ VSWN++I G ++ + + P FT
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT 417
Query: 345 FSHVLRS--SLAFQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
L S SL + L Q+H +++G + V +LMT YA+
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE--------------- 462
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN-GDYKEVLELF 459
TG NE K+ S + D VSWN +I A A + E + F
Sbjct: 463 -----------------TGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF 505
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
+ A + TF S+LSA S L LG +HGL K I T N LI YGK
Sbjct: 506 LNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEAT-TENALIACYGK 564
Query: 520 CGSIGSSVKIFNEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
CG + KIF+ M + R+ +TW ++IS N +AL+ M G + D
Sbjct: 565 CGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYAT 624
Query: 579 VLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFP 638
VL+A + GME+ R+ +E ++ +VD+ + G L A + TMP
Sbjct: 625 VLSAFASVATLERGMEVHACSVRAC-LESDVVVGSALVDMYSKCGRLDYALRFFNTMPV- 682
Query: 639 PNALIWRTFLEGCQR 653
N+ W + + G R
Sbjct: 683 RNSYSWNSMISGYAR 697
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 236/500 (47%), Gaps = 40/500 (8%)
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H + KN D ++ + N+L+N Y + SA K+F ++ +R+ VSW I+ + +
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCA--GLQNSILGKSIHAKVIKNALECDVFVGS 281
+AL M + +F NQ FV V+ +C G + G+ IH + K + D V +
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 282 ALVDFYAKCDNLEGAHLC-FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYR 339
L+ Y KC G LC F +I KN VSWN++I Y+ S F + +Q G R
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 340 PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
P E+TF ++ ++ + E +L +M + KSGL++D L
Sbjct: 204 PTEYTFGSLVTTACSLT-------------EPDVRLLEQIMCTIQKSGLLTD-------L 243
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ +V A + ++G + K+ +Q+E + V+ N ++ +E +LF
Sbjct: 244 FVGSGLVSA------FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF 297
Query: 460 KYMRAA-RIYPDNYTFVSLLSA-----CSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
M + + P++Y V LLS+ ++ L G +HG + T ++ + N L
Sbjct: 298 MDMNSMIDVSPESY--VILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGL 355
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
++MY KCGSI + ++F MTD++ ++W ++I+ L NG A+E+++ M P
Sbjct: 356 VNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGS 415
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT 633
LI+ L++C + G ++ + G++ + + ++ L G+L E KI +
Sbjct: 416 FTLISSLSSCASLKWAKLGQQIHGE-SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFS 474
Query: 634 TMPFPPNALIWRTFLEGCQR 653
+MP + + W + + R
Sbjct: 475 SMP-EHDQVSWNSIIGALAR 493
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 146/589 (24%), Positives = 276/589 (46%), Gaps = 42/589 (7%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D ++ L+ Y G VF++MP ++ V+W IVS + ++G ++ + ++V
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 134 RSEVALTESSFVGVIHGLSN--EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAG 191
+ + + +FV V+ + FG QIHGL+ K + + +V+N L++MY++C G
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 192 -IWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVIN 250
+ A F D+E+++ VSWN+II +++ + A ++ M D P + TF ++
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT 214
Query: 251 SCAGLQ--NSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+ L + L + I + K+ L D+FVGS LV +AK +L A F+++ +N
Sbjct: 215 TACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNA 274
Query: 309 VSWNALILGYASKS---SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLII 365
V+ N L++G + T +F+ + + + P + +L SS + L
Sbjct: 275 VTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYV---ILLSSFP-----EYSLAE 325
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
+G + V G ++T +GL+ F+ + N + +Y + G +
Sbjct: 326 EVGLKKGREVHGHVIT----TGLVD----FMVGI--------GNGLVNMYAKCGSIADAR 369
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
++ + D VSWN +I NG + E +E +K MR I P ++T +S LS+C+ L
Sbjct: 370 RVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLK 429
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
LG +HG K I + V N L+ +Y + G + KIF+ M + + ++W ++I
Sbjct: 430 WAKLGQQIHGESLKLG-IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII 488
Query: 546 SALGLNGFAQRALEK----FREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNR 601
AL ++R+L + F + G K +R+ +VL+A G ++ +
Sbjct: 489 GALAR---SERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI-HGLAL 544
Query: 602 SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ E + ++ + G + EKI + M + + W + + G
Sbjct: 545 KNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 217/463 (46%), Gaps = 36/463 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTF-GGLLSCDSLNPVE-G 58
M D++ VS+NS+I+ + G +A+ + M P FT L SC SL + G
Sbjct: 375 MTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG 434
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ LK G+ + V AL+ LY G L+E +F MP V+WNSI+ +
Sbjct: 435 QQIHGESLKLGIDL-NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR 493
Query: 119 -HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + + F R+ L +F V+ +S+ E G+QIHGL +KN E
Sbjct: 494 SERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEAT 553
Query: 178 VANSLVNMYFQCAGIWSAEKMF-KDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
N+L+ Y +C + EK+F + E RD V+WN++I +E KAL+L M
Sbjct: 554 TENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQT 613
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ + V+++ A + G +HA ++ LE DV VGSALVD Y+KC L+ A
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYA 673
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYR--PNEFTFSHVLRSSLA 354
F+ + +N SWN++I GYA L E ++L + P+ TF VL +
Sbjct: 674 LRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACS- 732
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
H ++ G++++E S+ SY + PR + + +A +
Sbjct: 733 ------HAGLLEEGFKHFE----SMSDSYGLA---------------PR-IEHFSCMADV 766
Query: 415 YNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAH-NGDYKEV 455
R G+ ++ + ++ +P+++ W V+ AC NG E+
Sbjct: 767 LGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAEL 809
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 320 bits (819), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 194/658 (29%), Positives = 341/658 (51%), Gaps = 22/658 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+VVS+NS++S Y + G ++ +F+ M G E TF +L C L G
Sbjct: 140 MPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLG 199
Query: 59 AQLQASVLKNGLFC-ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ V++ G C D +ALL +Y + E + VF+ +P K+ V+W++I++
Sbjct: 200 MQIHGIVVRVG--CDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCV 257
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ + + F E+ + +++S + V+ + +L G Q+H +K+ F + +
Sbjct: 258 QNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI 317
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V + ++MY +C + A+ +F + E + S+N +I ++ E+ KAL L+ R+
Sbjct: 318 VRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSG 377
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ ++ + V +CA ++ G I+ IK++L DV V +A +D Y KC L A
Sbjct: 378 LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 437
Query: 298 LCFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
F E+ ++ VSWNA+I + ++FL + +L+ P+EFTF +L++
Sbjct: 438 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS 497
Query: 357 L---LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L +++H I++ G + V SL+ Y+K G+I +A + R AN+
Sbjct: 498 LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS-----RFFQRANV--- 549
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+G E K+ ++ + VSWN +I+ ++ LF M I PD +T
Sbjct: 550 ----SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFT 605
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+ ++L C+ L + LG +H + K E+ SD ++C+ L+DMY KCG + S +F +
Sbjct: 606 YATVLDTCANLASAGLGKQIHAQVIKKEL-QSDVYICSTLVDMYSKCGDLHDSRLMFEKS 664
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
R+ +TW A+I +G + A++ F M KP+ V I++L AC H GL+ +G+
Sbjct: 665 LRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGL 724
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
E F M R YG++P++ HY +VD+L + G +K A ++I MPF + +IWRT L C
Sbjct: 725 EYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVC 782
Score = 218 bits (556), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 175/671 (26%), Positives = 309/671 (46%), Gaps = 64/671 (9%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQ 62
+ +F+ + ++ G +E + +MI GF PT F LL +S + V
Sbjct: 47 STTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFV-----S 101
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
AS++ + + D ++ Y + + + S F MP + +V+WNS++S + ++G
Sbjct: 102 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGES 161
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ +F ++ R + +F ++ S +D G QIHG+V++ G D +++ A++L
Sbjct: 162 LKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASAL 221
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
++MY + + ++F+ + ++ VSW+ II ++ AL+ + M +Q
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQ 281
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
+ + V+ SCA L LG +HA +K+ D V +A +D YAKCDN++ A + F
Sbjct: 282 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 341
Query: 303 ISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
N N S+NA+I GY+ + LL L+ G +E + S V R+
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA---------- 391
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
C +++ E GL LA ++L++ V AN +Y +
Sbjct: 392 CALVKGLSE----------------GLQIYGLAIKSSLSLD--VCVANAAIDMYGKCQAL 433
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
E ++ ++ R D VSWN +IAA NG E L LF M +RI PD +TF S+L AC
Sbjct: 434 AEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC 493
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NV-- 538
+ +L G +H I K+ + S+ + C+ LIDMY KCG I + KI + R NV
Sbjct: 494 TG-GSLGYGMEIHSSIVKSGMASNSSVGCS-LIDMYSKCGMIEEAEKIHSRFFQRANVSG 551
Query: 539 -----------------ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
++W ++IS + ++ A F M +G PD+ VL
Sbjct: 552 TMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLD 611
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHC--VVDLLVRYGHLKEAEKIITTMPFPP 639
C + G ++ ++ + E + D Y C +VD+ + G L ++ +++
Sbjct: 612 TCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRR 667
Query: 640 NALIWRTFLEG 650
+ + W + G
Sbjct: 668 DFVTWNAMICG 678
Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 133/535 (24%), Positives = 235/535 (43%), Gaps = 63/535 (11%)
Query: 129 FCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
F + + +++ ++F V + + LE G+Q H +I +GF V N L+ +Y
Sbjct: 36 FTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTN 95
Query: 189 CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA---------------------- 226
SA +F + +RDVVSWN +I ++S + KA
Sbjct: 96 SRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGY 155
Query: 227 ---------LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
+E+++ M + + + TF ++ C+ L+++ LG IH V++ + DV
Sbjct: 156 LQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDV 215
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQL 336
SAL+D YAK + F I KN VSW+A+I G + + ++ E+ ++
Sbjct: 216 VAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 275
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFV 396
++ ++ VLRS A L+L G L KS +D +
Sbjct: 276 NAGVSQSIYASVLRSCAALSELRLG---------------GQLHAHALKSDFAADGIVRT 320
Query: 397 TALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
L+ +Y + + L E + S+N +I + + L
Sbjct: 321 ATLD-------------MYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKAL 367
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDM 516
LF + ++ + D + + AC+ + L+ G ++GL K+ +S D V N IDM
Sbjct: 368 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS-LSLDVCVANAAIDM 426
Query: 517 YGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVAL 576
YGKC ++ + ++F+EM R+ ++W A+I+A NG L F M +PD
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 577 IAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
++L AC GG + GME+ + +S G+ ++D+ + G ++EAEKI
Sbjct: 487 GSILKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 108/256 (42%), Gaps = 10/256 (3%)
Query: 399 LNIPRAVVPAN--IIAGI-YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
L++ R+VV N + I Y R ++ L+Q+ +++ V CA G +
Sbjct: 8 LHMTRSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELG 67
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
+ +M + P + LL + + S + + +++S N +I+
Sbjct: 68 KQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVS-----WNKMIN 122
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
Y K + + FN M R+V++W +++S NG + +++E F +M G + D
Sbjct: 123 GYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRT 182
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+L C GM++ + R G + ++ ++D+ + E+ ++ +
Sbjct: 183 FAIILKVCSFLEDTSLGMQIHGIVVR-VGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 241
Query: 636 PFPPNALIWRTFLEGC 651
P N++ W + GC
Sbjct: 242 P-EKNSVSWSAIIAGC 256
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 317 bits (811), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 188/607 (30%), Positives = 309/607 (50%), Gaps = 33/607 (5%)
Query: 47 LLSCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL 106
L C SL E Q+ V KNGL+ + F T L+ L+ R+G +DE VFE + K
Sbjct: 44 LERCSSLK--ELRQILPLVFKNGLY-QEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 107 VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGL 166
V +++++ F K ++ + F + +V +F ++ +E +L G++IHGL
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 167 VIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKA 226
++K+GF +L L NMY +C + A K+F + RD+VSWNTI+ +++ A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 227 LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDF 286
LE+ M + + P+ T V V+ + + L+ +GK IH +++ + V + +ALVD
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 287 YAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE-LLQLGYRPNEFTF 345
YAKC +LE A F + +N+VSWN++I Y +P L+ + +L G +P + +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 346 SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
L + L+ I ++ E L + R V
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVE----------------------------LGLDRNV 372
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
N + +Y + + + + +L+ +VSWN +I A NG + L F MR+
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR 432
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ PD +T+VS+++A ++L +HG++ ++ + + FV L+DMY KCG+I
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRS-CLDKNVFVTTALVDMYAKCGAIMI 491
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ IF+ M++R+V TW A+I G +GF + ALE F EM+ KP+ V ++V++AC H
Sbjct: 492 ARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSH 551
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GLV G++ F M +Y +E MDHY +VDLL R G L EA I MP P ++
Sbjct: 552 SGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYG 611
Query: 646 TFLEGCQ 652
L CQ
Sbjct: 612 AMLGACQ 618
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/413 (30%), Positives = 223/413 (53%), Gaps = 9/413 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+R++VS+N+I++ YS+ G AL M M +P+ T +L + +L + G
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ +++G F + + TAL+ +Y + G L+ +F+ M +++V+WNS++ + +
Sbjct: 256 KEIHGYAMRSG-FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+ ++ M +F +++ V T+ S +G +H ++ DLE G IH L ++ G D + V
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL++MY +C + +A MF ++ R +VSWN +I A++ AL + +M V
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T+V VI + A L + K IH V+++ L+ +VFV +ALVD YAKC + A L
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG-YRPNEFTFSHVLRSSLAFQL 357
F +S +++ +WNA+I GY + + L E +Q G +PN TF V+ + L
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGL 554
Query: 358 LQLHCLIIRMGYENYEYVL-----GSLMTSYAKSGLISDALAFVTALNIPRAV 405
++ M ENY L G+++ ++G +++A F+ + + AV
Sbjct: 555 VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 313 bits (801), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 197/668 (29%), Positives = 345/668 (51%), Gaps = 52/668 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFL-YMINRGFEPTQFTFGGLL-SCDSLNPVEG 58
MP+RN+VS+++++SA + G E++L +FL + R P ++ + +C L+ G
Sbjct: 105 MPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG-RG 163
Query: 59 A----QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
QLQ+ ++K+G F D +VGT L+ Y + G +D VF+ +P KS VTW +++S
Sbjct: 164 RWMVFQLQSFLVKSG-FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMIS 222
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
K G + LF +L+ V V+ S LE G+QIH +++ G +
Sbjct: 223 GCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEM 282
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ + N L++ Y +C + +A K+F + ++++SW T++ ++ +A+EL+ MS
Sbjct: 283 DASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMS 342
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ P+ ++ SCA L G +HA IK L D +V ++L+D YAKCD L
Sbjct: 343 KFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLT 402
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ----LGYRPNEFTFSHVLR 350
A F + ++V +NA+I GY+ + + + + + RP+ TF +LR
Sbjct: 403 DARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLR 462
Query: 351 SSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
+S + L Q+H L+ + G + +A S LI
Sbjct: 463 ASASLTSLGLSKQIHGLMFKYGLN---------LDIFAGSALID---------------- 497
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
+Y+ ++ + +++ D+V WN + A + +E L LF ++ +R
Sbjct: 498 -------VYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSR 550
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLH-GLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
PD +TF ++++A L ++ LG H L+K+ + + ++ N L+DMY KCGS
Sbjct: 551 ERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRG--LECNPYITNALLDMYAKCGSPED 608
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
+ K F+ R+V+ W ++IS+ +G ++AL+ +M G +P+ + + VL+AC H
Sbjct: 609 AHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSH 668
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GLV +G++ FE M R +G+EPE +HY C+V LL R G L +A ++I MP P A++WR
Sbjct: 669 AGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWR 727
Query: 646 TFLEGCQR 653
+ L GC +
Sbjct: 728 SLLSGCAK 735
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 153/568 (26%), Positives = 263/568 (46%), Gaps = 45/568 (7%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D ++ L+ LY R G + VFE MP ++LV+W+++VS HG E+ + +F E
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 134 RSEVALTE----SSFVGVIHGLSNE-QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQ 188
R+ SSF+ GL + + F Q+ ++K+GFD ++ V L++ Y +
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLDGRGRWMVF--QLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 189 CAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYV 248
I A +F + + V+W T+I + +L+L+ ++ D V P+ V
Sbjct: 196 DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTV 255
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+++C+ L GK IHA +++ LE D + + L+D Y KC + AH F+ + NKNI
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNI 315
Query: 309 VSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCL 363
+SW L+ GY + ++ L + + G +P+ + S +L S + L Q+H
Sbjct: 316 ISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAY 375
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
I+ N YV SL+ YAK ++DA V+ +I G Y+R G
Sbjct: 376 TIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG-YSRLG---- 430
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
W + E L +F+ MR I P TFVSLL A +
Sbjct: 431 -------------TQWEL-----------HEALNIFRDMRFRLIRPSLLTFVSLLRASAS 466
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
L +L L +HGL+ K ++ D F + LID+Y C + S +F+EM ++++ W +
Sbjct: 467 LTSLGLSKQIHGLMFKYG-LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNS 525
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF-ERMNRS 602
+ + + AL F E++ +PD ++TA + V+ G E + + R
Sbjct: 526 MFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRG 585
Query: 603 YGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
P + + ++D+ + G ++A K
Sbjct: 586 LECNPYIT--NALLDMYAKCGSPEDAHK 611
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 217/452 (48%), Gaps = 48/452 (10%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
F ++ +++ L + +HG +I G + + ++N L+N+Y + G+ A K+F+ +
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 204 IRDVVSWNTIIGALAESENFGKALELYL---RMSVDIVFPNQTTFVYVINSCAGL--QNS 258
R++VSW+T++ A + ++L ++L R D PN+ I +C+GL +
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDS--PNEYILSSFIQACSGLDGRGR 164
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
+ + + ++K+ + DV+VG+ L+DFY K N++ A L F + K+ V+W +I G
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 319 ASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYE 373
S S+ L +L++ P+ + S VL + L Q+H I+R G E
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 374 YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER 433
++ L+ SY K G R + + G+ N+
Sbjct: 285 SLMNVLIDSYVKCG---------------RVIAAHKLFNGMPNK---------------- 313
Query: 434 PDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL 493
+I+SW +++ N +KE +ELF M + PD Y S+L++C+ L L G+ +
Sbjct: 314 -NIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV 372
Query: 494 HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI---SALGL 550
H K + +D++V N LIDMY KC + + K+F+ +V+ + A+I S LG
Sbjct: 373 HAYTIKAN-LGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGT 431
Query: 551 NGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
AL FR+M F +P + +++L A
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 80/153 (52%), Gaps = 13/153 (8%)
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
DT++ N+LI++Y + G + + K+F +M +RN+++W+ ++SA +G + +L F +E
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVF--LE 135
Query: 566 FLGFK---PDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV----VDL 618
F + P+ L + + AC GL G + ++ +S+ V+ D V +D
Sbjct: 136 FWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQL-QSFLVKSGFDRDVYVGTLLIDF 192
Query: 619 LVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
++ G++ A + +P + + W T + GC
Sbjct: 193 YLKDGNIDYARLVFDALP-EKSTVTWTTMISGC 224
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 309 bits (792), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/652 (28%), Positives = 328/652 (50%), Gaps = 32/652 (4%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQ 62
DR+V N+ + + G +E+A+++ +P L DS + +G ++
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVD 117
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
+ NG F D+ +G+ L +Y G L E VF+++ + + WN +++ K G
Sbjct: 118 NFIRGNG-FVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF 176
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ LF +++ S V + +F V S+ + + GEQ+HG ++K+GF V NSL
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSL 236
Query: 183 VNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
V Y + + SA K+F ++ RDV+SWN+II + K L ++++M V + +
Sbjct: 237 VAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDL 296
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSE 302
T V V CA + LG+++H+ +K + + L+D Y+KC +L+ A F E
Sbjct: 297 ATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFRE 356
Query: 303 ISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLH 361
+S++++VS+ ++I GYA + + ++ L E+ + G P+ +T + VL ++LL
Sbjct: 357 MSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD-- 414
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
G +E++ + L F + +N + +Y + G
Sbjct: 415 -----EGKRVHEWIK-------------ENDLGF--------DIFVSNALMDMYAKCGSM 448
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK-YMRAARIYPDNYTFVSLLSA 480
E + S++ DI+SWN +I + N E L LF + R PD T +L A
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 508
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
C+ L G +HG I + SD V N L+DMY KCG++ + +F+++ +++++
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYF-SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
WT +I+ G++GF + A+ F +M G + D ++ +++L AC H GLV EG F M
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+EP ++HY C+VD+L R G L +A + I MP PP+A IW L GC+
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCR 679
Score = 216 bits (549), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 156/569 (27%), Positives = 278/569 (48%), Gaps = 45/569 (7%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGL-LSCDSLNPVEGA-QLQASVL 66
+N +++ ++ G ++ +F M++ G E +TF + S SL V G QL +L
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K+G F VG +L+ Y ++ +D VF++M + +++WNSI++ + +G E +
Sbjct: 223 KSG-FGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGL 281
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
+F +++ S + + ++ V V G ++ + + G +H + +K F E N+L++MY
Sbjct: 282 SVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 341
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+C + SA+ +F+++ R VVS+ ++I A G+A++L+ M + + P+ T
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
V+N CA + GK +H + +N L D+FV +AL+D YAKC +++ A L FSE+ K
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461
Query: 307 NIVSWNALILGYASKSSPTSIFLLIELL--QLGYRPNEFTFSHVLRSSLAFQLL----QL 360
+I+SWN +I GY+ L LL + + P+E T + VL + + ++
Sbjct: 462 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521
Query: 361 HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQ 420
H I+R GY + +V SL+ YAK G A++ A++
Sbjct: 522 HGYIMRNGYFSDRHVANSLVDMYAKCG----------------ALLLAHM---------- 555
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
L + D+VSW ++IA +G KE + LF MR A I D +FVSLL A
Sbjct: 556 ------LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 609
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVI 539
CS + G +++ I ++DM + G + + + M +
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDAT 669
Query: 540 TWTALISALGLN---GFAQRALEKFREME 565
W AL+ ++ A++ EK E+E
Sbjct: 670 IWGALLCGCRIHHDVKLAEKVAEKVFELE 698
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 216/416 (51%), Gaps = 20/416 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEG 58
M +R+V+S+NSII+ Y G E L +F+ M+ G E T + + DS G
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ + +K D F T LL +Y + G LD +VF +M +S+V++ S+++ + +
Sbjct: 316 RAVHSIGVKACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 374
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + + LF E+ ++ + V++ + + L+ G+++H + +N +++ V
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY-LRMSVDI 237
+N+L++MY +C + AE +F ++ ++D++SWNTIIG +++ +AL L+ L +
Sbjct: 435 SNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKR 494
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
P++ T V+ +CA L G+ IH +++N D V ++LVD YAKC L AH
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----RSS 352
+ F +I++K++VSW +I GY +I L ++ Q G +E +F +L S
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 614
Query: 353 LA------FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
L F +++ C I E+Y ++ L A++G + A F+ + IP
Sbjct: 615 LVDEGWRFFNIMRHECK-IEPTVEHYACIVDML----ARTGDLIKAYRFIENMPIP 665
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 309 bits (792), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 195/678 (28%), Positives = 335/678 (49%), Gaps = 55/678 (8%)
Query: 9 FNSIISAYSRCGYVEDALRMFLY-MINRGFEPTQFTFGGLL-SCDSLNPV-EGAQLQASV 65
N I++ + + +AL F + N F+ T+ L+ +C S + +G ++ +
Sbjct: 34 MNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHI 93
Query: 66 LKNGLFCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED 124
L + C D + +L +YG+ G L + VF+ MP ++LV++ S+++ + ++G +
Sbjct: 94 LNSN--CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAE 151
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVN 184
+ L+ ++++ ++ + +F +I ++ D+ G+Q+H VIK L+ N+L+
Sbjct: 152 AIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIA 211
Query: 185 MYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE-SENFGKALELYLRMSVDIVFPNQT 243
MY + + A ++F + ++D++SW++II ++ F L +S + PN+
Sbjct: 212 MYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEY 271
Query: 244 TFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
F + +C+ L G IH IK+ L + G +L D YA+C L A F +I
Sbjct: 272 IFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQI 331
Query: 304 SNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLL 358
+ SWN +I G A+ + ++ + ++ G+ P+ + +L + Q +
Sbjct: 332 ERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGM 391
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
Q+H II+ G+ V SL+T Y F + L N+ N
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMYT----------FCSDL-----YCCFNLFEDFRNNA 436
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLL 478
D VSWN ++ AC + E+L LFK M + PD+ T +LL
Sbjct: 437 ----------------DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLL 480
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
C ++ +L LGS +H KT + + + F+ N LIDMY KCGS+G + +IF+ M +R+V
Sbjct: 481 RGCVEISSLKLGSQVHCYSLKTGL-APEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDV 539
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFER 598
++W+ LI +GF + AL F+EM+ G +P+ V + VLTAC H GLV EG++L+
Sbjct: 540 VSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYAT 599
Query: 599 MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC---- 654
M +G+ P +H CVVDLL R G L EAE+ I M P+ ++W+T L C+
Sbjct: 600 MQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVH 659
Query: 655 -------RIAKYDTLNST 665
I K D NST
Sbjct: 660 LAQKAAENILKIDPFNST 677
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 159/584 (27%), Positives = 283/584 (48%), Gaps = 58/584 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
MP+RN+VS+ S+I+ YS+ G +A+R++L M+ P QF FG ++ +C S + V G
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 59 AQLQASVLKNGLFCADAFVG-TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
QL A V+K L + + AL+ +Y R + + VF +P K L++W+SI++ F
Sbjct: 188 KQLHAQVIK--LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS 245
Query: 118 KHGFVEDCMFLFCELVRSEV-ALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+ GF + + E++ V E F + S+ ++G QIHGL IK+
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA 305
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ SL +MY +C + SA ++F +E D SWN II LA + +A+ ++ +M
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 237 IVFPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
P+ + ++ CA + L G IH+ +IK D+ V ++L+ Y C +L
Sbjct: 366 GFIPDAISLRSLL--CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDL- 422
Query: 295 GAHLCFSEI----SNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVL 349
+ CF+ +N + VSWN ++ P + L +L+ + P+ T ++L
Sbjct: 423 --YCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLL 480
Query: 350 RSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
R + L Q+HC ++ G +++ K+GLI
Sbjct: 481 RGCVEISSLKLGSQVHCYSLKTGLAPEQFI---------KNGLID--------------- 516
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+Y + G + ++ ++ D+VSW+ +I A +G +E L LFK M++A
Sbjct: 517 --------MYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSA 568
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
I P++ TFV +L+ACS + + G L+ ++ IS C+ ++D+ + G +
Sbjct: 569 GIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNE 628
Query: 526 SVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
+ + +EM + +V+ W L+SA G AQ+A E +++
Sbjct: 629 AERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKID 672
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 308 bits (790), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 196/662 (29%), Positives = 337/662 (50%), Gaps = 45/662 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLL-SCDSLNPVE-GAQ 60
+N+ +N++IS+YSR ++ L F+ MI+ P FT+ ++ +C ++ V G
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ V+K GL D FVG AL+ YG HG + + + +F+ MP ++LV+WNS++ +F +G
Sbjct: 209 VHGLVVKTGL-VEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 121 FVEDCMFLFCELVRSE----VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
F E+ L E++ ++ V V+ + E+++ G+ +HG +K D EL
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV- 235
++ N+L++MY +C I +A+ +FK ++VVSWNT++G + + ++ +M
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 387
Query: 236 -DIVFPNQTTFVYVINSCAGLQNSILG--KSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ V ++ T + + C S L K +H +K + V +A V YAKC +
Sbjct: 388 GEDVKADEVTILNAVPVC--FHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRS 351
L A F I +K + SWNALI G+A + P S+ +++ G P+ FT +L +
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ L R+G E + +++ ++ L D +++ L++
Sbjct: 506 CSKLKSL-------RLGKEVHGFII--------RNWLERDLFVYLSVLSL---------- 540
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
Y G+ L +E +VSWN VI NG L +F+ M I
Sbjct: 541 ---YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG 597
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ + + ACS L +L LG H K ++ D F+ LIDMY K GSI S K+FN
Sbjct: 598 ISMMPVFGACSLLPSLRLGREAHAYALK-HLLEDDAFIACSLIDMYAKNGSITQSSKVFN 656
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ +++ +W A+I G++G A+ A++ F EM+ G PD + + VLTAC H GL+ E
Sbjct: 657 GLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHE 716
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIIT-TMPFPPNALIWRTFLEG 650
G+ ++M S+G++P + HY CV+D+L R G L +A +++ M + IW++ L
Sbjct: 717 GLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS 776
Query: 651 CQ 652
C+
Sbjct: 777 CR 778
Score = 209 bits (531), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 143/533 (26%), Positives = 261/533 (48%), Gaps = 45/533 (8%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D + T ++ +Y G D+ VF+ + K+L WN+++S + ++ ++ + F E++
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 134 RSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
+ L + ++ VI + D+ G +HGLV+K G ++ V N+LV+ Y +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAES----ENFGKALELYLRMSVDIVFPNQTTFVYV 248
A ++F + R++VSWN++I +++ E+F E+ P+ T V V
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNI 308
+ CA + LGK +H +K L+ ++ + +AL+D Y+KC + A + F +NKN+
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358
Query: 309 VSWNALILGYASKSSPTSIFLLIELLQLG---YRPNEFTFSHVL----RSSLAFQLLQLH 361
VSWN ++ G++++ F ++ + G + +E T + + S L +LH
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 418
Query: 362 CLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQY 421
C ++ + E V + + SYAK G +S A + GI ++T
Sbjct: 419 CYSLKQEFVYNELVANAFVASYAKCGSLSYA---------------QRVFHGIRSKT--- 460
Query: 422 NETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSAC 481
+ SWN +I A + D + L+ M+ + + PD++T SLLSAC
Sbjct: 461 --------------VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
SKL +L LG +HG I + + D FV ++ +Y CG + + +F+ M D+++++W
Sbjct: 507 SKLKSLRLGKEVHGFIIRN-WLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
+I+ NGF RAL FR+M G + ++++ V AC +R G E
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGRE 618
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 145/598 (24%), Positives = 281/598 (46%), Gaps = 49/598 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR----GFEPTQFTFGGLLS-CDSLNP 55
MP+RN+VS+NS+I +S G+ E++ + M+ F P T +L C
Sbjct: 248 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 56 V---EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSI 112
+ +G A L+ + + AL+ +Y + GC+ +F+ K++V+WN++
Sbjct: 308 IGLGKGVHGWAVKLR---LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 364
Query: 113 VSIFGKHGFVEDCMFLFCELVR--SEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
V F G + +++ +V E + + + +E L +++H +K
Sbjct: 365 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQ 424
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
F Y LVAN+ V Y +C + A+++F + + V SWN +IG A+S + +L+ +
Sbjct: 425 EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAH 484
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
L+M + + P+ T ++++C+ L++ LGK +H +I+N LE D+FV +++ Y C
Sbjct: 485 LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 544
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVL 349
L F + +K++VSWN +I GY P ++ + +++ G + + V
Sbjct: 545 GELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVF 604
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
A LL +R+G E + Y L L+ DA + ++
Sbjct: 605 G---ACSLLP----SLRLGREAHAYALKHLLE--------DDAFIACSLID--------- 640
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+Y + G ++ K+ + L+ SWN +I +G KE ++LF+ M+ P
Sbjct: 641 ----MYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNP 696
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D+ TF+ +L+AC+ + G +K + + + +IDM G+ G + ++++
Sbjct: 697 DDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRV 756
Query: 530 F-NEMTDR-NVITWTALISALGLNG---FAQRALEKFREMEFLGFKPDRVALIAVLTA 582
EM++ +V W +L+S+ ++ ++ K E+E KP+ L++ L A
Sbjct: 757 VAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELE--PEKPENYVLLSNLYA 812
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 224/513 (43%), Gaps = 40/513 (7%)
Query: 147 VIHGLSNEQDLEFGEQIHGLVI-KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR 205
++ +D+E G +IH LV + ++ ++ MY C + +F + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 206 DVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
++ WN +I + + +E + + LE ++ M S + P+ T+ VI +CAG+ + +G ++
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-S 323
H V+K L DVFVG+ALV FY + A F + +N+VSWN++I ++ S
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 324 PTSIFLLIELLQL----GYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
S LL E+++ + P+ T VL +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVL----------------------------PV 301
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+ GL + L + + +V N + +Y++ G + ++VSW
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAA--RIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
N ++ + GD ++ + M A + D T ++ + C L LH
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYS 421
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
K E + ++ V N + Y KCGS+ + ++F+ + + V +W ALI + + +
Sbjct: 422 LKQEFVYNE-LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 480
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
L+ +M+ G PD + ++L+AC +R G E+ + R++ +E ++ Y V+
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLS 539
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
L + G L + + M + + W T + G
Sbjct: 540 LYIHCGELCTVQALFDAME-DKSLVSWNTVITG 571
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 169/377 (44%), Gaps = 31/377 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--G 58
M D+++VS+N++I+ Y + G+ + AL +F M+ G + + + SL P G
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ A LK+ L DAF+ +L+ +Y ++G + + VF + KS +WN+++ +G
Sbjct: 617 REAHAYALKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 675
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSN----EQDLEFGEQIHGLVIKNGFDY 174
HG ++ + LF E+ R+ + +F+GV+ ++ + L + +Q+ G
Sbjct: 676 HGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSF---GLKP 732
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKD--VEIRDVVSWNTIIGALAESENFGKALELYLR 232
L +++M + + A ++ + E DV W +++ + +N ++ +
Sbjct: 733 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAK 792
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ ++ +V + N AGL + + ++ + +L D A C
Sbjct: 793 L-FELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKD-----------AGCSW 840
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
+E FS + + + G+ S SI L +++ ++GYRP+ + H L
Sbjct: 841 IELNRKVFSFVVGERFLD------GFEEIKSLWSI-LEMKISKMGYRPDTMSVQHDLSEE 893
Query: 353 LAFQLLQLHCLIIRMGY 369
+ L+ H + + Y
Sbjct: 894 EKIEQLRGHSEKLALTY 910
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 190/564 (33%), Positives = 304/564 (53%), Gaps = 43/564 (7%)
Query: 97 VFEDMP-RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNE 154
VFE+ R + WNS++S + K+ D + +F L+ + + +S +F VI
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTII 214
G IH LV+K+G+ +++VA+SLV MY + ++ ++F ++ RDV SWNT+I
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 215 GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
+S KALEL+ RM PN + I++C+ L GK IH K +K E
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIEL 333
D +V SALVD Y KCD LE A F ++ K++V+WN++I GY +K S + + +L +
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 334 LQLGYRPNEFTFSHVLRS-SLAFQLLQ---LHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
+ G RP++ T + +L + S + LL +H +IR YV SL+ Y K G
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCG-- 358
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV-SWNIVIAACAH 448
AN+ ++++T + D+ SWN++I++
Sbjct: 359 -----------------EANLAETVFSKT--------------QKDVAESWNVMISSYIS 387
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
G++ + +E++ M + + PD TF S+L ACS+L L G +H I ++ + +D
Sbjct: 388 VGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRL-ETDEL 446
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
+ + L+DMY KCG+ + +IFN + ++V++WT +ISA G +G + AL +F EM+ G
Sbjct: 447 LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG 506
Query: 569 FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEA 628
KPD V L+AVL+AC H GL+ EG++ F +M YG+EP ++HY C++D+L R G L EA
Sbjct: 507 LKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEA 566
Query: 629 EKIITTMP-FPPNALIWRTFLEGC 651
+II P NA + T C
Sbjct: 567 YEIIQQTPETSDNAELLSTLFSAC 590
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 140/557 (25%), Positives = 259/557 (46%), Gaps = 43/557 (7%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGF-EPTQFTFGGLLSCDSLNPVE--GAQL 61
+V +NS++S YS+ D L +F ++N P FTF ++ E G +
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMI 129
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
V+K+G C D V ++L+G+Y + + + VF++MP + + +WN+++S F + G
Sbjct: 130 HTLVVKSGYVC-DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
E + LF + S S I S LE G++IH +K GF+ + V ++
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
LV+MY +C + A ++F+ + + +V+WN++I + +E+ RM ++ P+
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS 301
QTT ++ +C+ +N + GK IH VI++ + D++V +L+D Y KC A FS
Sbjct: 309 QTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFS 368
Query: 302 EISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-- 358
+ SWN +I Y S + ++ + +++ +G +P+ TF+ VL + L
Sbjct: 369 KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEK 428
Query: 359 --QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
Q+H I E E +L +L+ +Y+
Sbjct: 429 GKQIHLSISESRLETDELLLSALL--------------------------------DMYS 456
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G E ++ + + + D+VSW ++I+A +G +E L F M+ + PD T ++
Sbjct: 457 KCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLA 516
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM--T 534
+LSAC + G ++ I + +ID+ G+ G + + +I + T
Sbjct: 517 VLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPET 576
Query: 535 DRNVITWTALISALGLN 551
N + L SA L+
Sbjct: 577 SDNAELLSTLFSACCLH 593
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 192/352 (54%), Gaps = 4/352 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+R+V S+N++IS + + G E AL +F M + GFEP + +S C L +E G
Sbjct: 168 MPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERG 227
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ +K G F D +V +AL+ +YG+ CL+ VF+ MPRKSLV WNS++ +
Sbjct: 228 KEIHRKCVKKG-FELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVA 286
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G + C+ + ++ ++++ ++ S ++L G+ IHG VI++ + ++ V
Sbjct: 287 KGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYV 346
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SL+++YF+C AE +F + SWN +I + N+ KA+E+Y +M V
Sbjct: 347 NCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGV 406
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ TF V+ +C+ L GK IH + ++ LE D + SAL+D Y+KC N + A
Sbjct: 407 KPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFR 466
Query: 299 CFSEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVL 349
F+ I K++VSW +I Y S P +++ E+ + G +P+ T VL
Sbjct: 467 IFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVL 518
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 229/481 (47%), Gaps = 41/481 (8%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESE 221
+H ++ G ++++ SL+N+YF C SA +F++ +IR DV WN+++ +++
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 222 NFGKALELYLR-MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVG 280
F LE++ R ++ I P+ TF VI + L LG+ IH V+K+ CDV V
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 281 SALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALI-LGYASKSSPTSIFLLIELLQLGYR 339
S+LV YAK + E + F E+ +++ SWN +I Y S + ++ L + G+
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 340 PNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
PN + + + + L ++H ++ G+E EYV +L+ Y K
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGK---------- 255
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
L + R V ++ R +V+WN +I GD K
Sbjct: 256 CDCLEVAREV----------------------FQKMPRKSLVAWNSMIKGYVAKGDSKSC 293
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
+E+ M P T S+L ACS+ NL G +HG + ++ ++++D +V LID
Sbjct: 294 VEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRS-VVNADIYVNCSLID 352
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
+Y KCG + +F++ +W +IS+ G +A+E + +M +G KPD V
Sbjct: 353 LYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVT 412
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
+VL AC + +G ++ ++ S +E + ++D+ + G+ KEA +I ++
Sbjct: 413 FTSVLPACSQLAALEKGKQIHLSISESR-LETDELLLSALLDMYSKCGNEKEAFRIFNSI 471
Query: 636 P 636
P
Sbjct: 472 P 472
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 153/326 (46%), Gaps = 34/326 (10%)
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS-NKNIVSWNALILGYAS 320
K +H +++ L DV + +L++ Y C + A F ++ WN+L+ GY+
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 321 KSS-PTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGS 378
S ++ + LL P+ FTF +V+++ G E++
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA---------------YGALGREFLGRM 128
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
+ T KSG + D VV A+ + G+Y + + ++++ ++ D+ S
Sbjct: 129 IHTLVVKSGYVCD-------------VVVASSLVGMYAKFNLFENSLQVFDEMPERDVAS 175
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLH-GLI 497
WN VI+ +G+ ++ LELF M ++ P++ + +SACS+L L G +H +
Sbjct: 176 WNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCV 235
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
KK D +V + L+DMYGKC + + ++F +M ++++ W ++I G ++
Sbjct: 236 KKG--FELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSC 293
Query: 558 LEKFREMEFLGFKPDRVALIAVLTAC 583
+E M G +P + L ++L AC
Sbjct: 294 VEILNRMIIEGTRPSQTTLTSILMAC 319
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 131/260 (50%), Gaps = 11/260 (4%)
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKE 454
+ L + R VV + +Y + + + R D+ WN +++ + N + +
Sbjct: 30 ILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHD 89
Query: 455 VLELFKYMRAARI-YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
LE+FK + I PD++TF +++ A L LG +H L+ K+ + D V + L
Sbjct: 90 TLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVC-DVVVASSL 148
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
+ MY K +S+++F+EM +R+V +W +IS +G A++ALE F ME GF+P+
Sbjct: 149 VGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNS 208
Query: 574 VALIAVLTACRHGGLVREGMELFER-MNRSYGVEPEMDHY--HCVVDLLVRYGHLKEAEK 630
V+L ++AC + G E+ + + + + E+D Y +VD+ + L+ A +
Sbjct: 209 VSLTVAISACSRLLWLERGKEIHRKCVKKGF----ELDEYVNSALVDMYGKCDCLEVARE 264
Query: 631 IITTMPFPPNALIWRTFLEG 650
+ MP + + W + ++G
Sbjct: 265 VFQKMP-RKSLVAWNSMIKG 283
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 303 bits (776), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 193/623 (30%), Positives = 295/623 (47%), Gaps = 80/623 (12%)
Query: 81 LLGLYGRHGCLDEVVSVFEDMPRKS--LVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVA 138
L+ Y GCL VS+ P + WNS++ +G +G C++LF +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 139 LTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKM 198
+F V + GE H L + GF + V N+LV MY +C + A K+
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 199 FKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQN 257
F ++ + DVVSWN+II + A+ ALE++ RM+ + P+ T V V+ CA L
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 258 SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG 317
LGK +H + + + ++FVG+ LVD YAKC ++ A+ FS +S K++VSWNA++ G
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 318 YASKSSPTSIFLLIELLQ----------------------LGY--------------RPN 341
Y+ L E +Q LGY +PN
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 342 EFTFSHVLRSSLAFQLL----QLHCLIIRM-------GYENYEYVLGSLMTSYAKSGLIS 390
E T VL + L ++HC I+ G+ + V+ L+ YAK +
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 391 DALAFVTALNIP-RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHN 449
A A +L+ R VV ++ G Y++ G N+ ++LLS++ D
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED-------------- 470
Query: 450 GDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFV 509
+ P+ +T L AC+ L L +G +H + + + FV
Sbjct: 471 ---------------CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 510 CNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGF 569
N LIDMY KCGSI + +F+ M +N +TWT+L++ G++G+ + AL F EM +GF
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575
Query: 570 KPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAE 629
K D V L+ VL AC H G++ +GME F RM +GV P +HY C+VDLL R G L A
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAAL 635
Query: 630 KIITTMPFPPNALIWRTFLEGCQ 652
++I MP P ++W FL C+
Sbjct: 636 RLIEEMPMEPPPVVWVAFLSCCR 658
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 150/628 (23%), Positives = 268/628 (42%), Gaps = 106/628 (16%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQ 60
D V +NS+I +Y G L +F M + + P +TF + +C ++ V G
Sbjct: 89 DAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGES 148
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
A L G F ++ FVG AL+ +Y R L + VF++M +V+WNSI+ + K G
Sbjct: 149 AHALSLVTG-FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 121 FVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + +F + ++ + V V+ ++ G+Q+H + + + V
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS----- 234
N LV+MY +C + A +F ++ ++DVVSWN ++ ++ F A+ L+ +M
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 235 VDIVF------------------------------PNQTTFVYVINSCAGLQNSILGKSI 264
+D+V PN+ T + V++ CA + + GK I
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 265 HAKVIKNALEC-------DVFVGSALVDFYAKCDNLEGAHLCFSEISNK--NIVSWNALI 315
H IK ++ + V + L+D YAKC ++ A F +S K ++V+W +I
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 316 LGYASKSSPT-SIFLLIELLQ--LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY 372
GY+ ++ LL E+ + RPN FT S L + + L++ I N
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 507
Query: 373 E-----YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
+ +V L+ YAK G ISDA + V +++ G Y G E + +
Sbjct: 508 QNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTG-YGMHGYGEEALGI 566
Query: 428 LSQLERP----DIVSWNIVIAACAHNGDYKEVLELFKYMR---AARIYPDNYTFVSLLSA 480
++ R D V+ +V+ AC+H+G + +E F M+ P++Y A
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHY-------A 619
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVI 539
C L+D+ G+ G + +++++ EM + +
Sbjct: 620 C-------------------------------LVDLLGRAGRLNAALRLIEEMPMEPPPV 648
Query: 540 TWTALISALGLNG---FAQRALEKFREM 564
W A +S ++G + A EK E+
Sbjct: 649 VWVAFLSCCRIHGKVELGEYAAEKITEL 676
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 116/263 (44%), Gaps = 50/263 (19%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMF------------------------------- 29
M ++VVS+N++++ YS+ G EDA+R+F
Sbjct: 290 MSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEA 349
Query: 30 ----LYMINRGFEPTQFTFGGLLS-CDSLNP-VEGAQLQASVL-------KNGLFCADAF 76
M++ G +P + T +LS C S+ + G ++ + KNG +
Sbjct: 350 LGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNG-HGDENM 408
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRK--SLVTWNSIVSIFGKHGFVEDCMFLFCELVR 134
V L+ +Y + +D ++F+ + K +VTW ++ + +HG + L E+
Sbjct: 409 VINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Query: 135 SEVALTESSFV--GVIHGLSNEQDLEFGEQIHGLVIKNGFD-YELLVANSLVNMYFQCAG 191
+ ++F + ++ L G+QIH ++N + L V+N L++MY +C
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGS 528
Query: 192 IWSAEKMFKDVEIRDVVSWNTII 214
I A +F ++ ++ V+W +++
Sbjct: 529 ISDARLVFDNMMAKNEVTWTSLM 551
Score = 36.6 bits (83), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M +N V++ S+++ Y GY E+AL +F M GF+ T +L +C ++
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598
Query: 60 QLQASVLKNGLFCADAFVGTA-LLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVSIFG 117
+ +K + A L+ L GR G L+ + + E+MP V W + +S
Sbjct: 599 MEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCR 658
Query: 118 KHGFVE 123
HG VE
Sbjct: 659 IHGKVE 664
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 297 bits (760), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/590 (30%), Positives = 309/590 (52%), Gaps = 39/590 (6%)
Query: 73 ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL 132
+D +V +L Y + G L +F++MP++ V+WN+++S + G +ED LF +
Sbjct: 33 SDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCM 92
Query: 133 VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGI 192
RS + SF ++ G+++ + + GEQ+HGLVIK G++ + V +SLV+MY +C +
Sbjct: 93 KRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERV 152
Query: 193 WSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI-VFPNQTTFVYVINS 251
A + FK++ + VSWN +I + + A L M + V + TF ++
Sbjct: 153 EDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTL 212
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS-NKNIVS 310
L K +HAKV+K L+ ++ + +A++ YA C ++ A F + +K+++S
Sbjct: 213 LDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLIS 272
Query: 311 WNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLR--SSLAFQLL--QLHCLII 365
WN++I G++ S F L I++ + + +T++ +L S Q+ LH ++I
Sbjct: 273 WNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVI 332
Query: 366 RMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
+ G E +L++ Y + P TG + +
Sbjct: 333 KKGLEQVTSATNALISMY---------------IQFP---------------TGTMEDAL 362
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
L L+ D++SWN +I A G ++ ++ F Y+R++ I D+Y F +LL +CS L
Sbjct: 363 SLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLA 422
Query: 486 NLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN-VITWTAL 544
L LG +H L K+ +S++ FV + LI MY KCG I S+ K F +++ ++ + W A+
Sbjct: 423 TLQLGQQIHALATKSGFVSNE-FVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAM 481
Query: 545 ISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYG 604
I +G Q +L+ F +M K D V A+LTAC H GL++EG+EL M Y
Sbjct: 482 ILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYK 541
Query: 605 VEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRC 654
++P M+HY VDLL R G + +A+++I +MP P+ ++ +TFL C+ C
Sbjct: 542 IQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRAC 591
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/555 (26%), Positives = 281/555 (50%), Gaps = 33/555 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP R+ VS+N++IS Y+ CG +EDA +F M G + ++F LL S+ + G
Sbjct: 61 MPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLG 120
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ V+K G C + +VG++L+ +Y + +++ F+++ + V+WN++++ F +
Sbjct: 121 EQVHGLVIKGGYEC-NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQ 179
Query: 119 HGFVEDCMFLFCEL-VRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
++ +L + +++ V + +F ++ L + +Q+H V+K G +E+
Sbjct: 180 VRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEIT 239
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ N++++ Y C + A+++F + +D++SWN++I ++ E A EL+++M
Sbjct: 240 ICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRH 299
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK--CDNLE 294
V + T+ ++++C+G ++ I GKS+H VIK LE +AL+ Y + +E
Sbjct: 300 WVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTME 359
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F + +K+++SWN++I G+A K S ++ L + +++ FS +LRS
Sbjct: 360 DALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCS 419
Query: 354 AFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
LQL H L + G+ + E+V+ SL+ Y+K G+I A ++ + V N
Sbjct: 420 DLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWN 479
Query: 410 IIAGIYNRTGQYNETVKLLSQL----ERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+ Y + G ++ L SQ+ + D V++ ++ AC+H G +E LEL M
Sbjct: 480 AMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPV 539
Query: 466 -RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT-EIISS-----DTFVCNMLIDMYG 518
+I P + + + LG + GL+ K E+I S D V + +
Sbjct: 540 YKIQPRMEHYAAAVD--------LLGRA--GLVNKAKELIESMPLNPDPMVLKTFLGVCR 589
Query: 519 KCGSIGSSVKIFNEM 533
CG I + ++ N +
Sbjct: 590 ACGEIEMATQVANHL 604
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 230/500 (46%), Gaps = 51/500 (10%)
Query: 164 HGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENF 223
H IK G ++ V+N +++ Y + + A +F ++ RD VSWNT+I
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 224 GKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSAL 283
A L+ M + +F ++ A ++ LG+ +H VIK EC+V+VGS+L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL--GYRPN 341
VD YAKC+ +E A F EIS N VSWNALI G+ + F L+ L+++ +
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 342 EFTFSHVLR----SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
TF+ +L L Q+H ++++G ++ + ++++SYA G +SDA
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
L + D++SWN +IA + + + E
Sbjct: 263 GLGGSK-------------------------------DLISWNSMIAGFSKHELKESAFE 291
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI--KKTEIISSDTFVCNMLID 515
LF M+ + D YT+ LLSACS + G SLHG++ K E ++S T N LI
Sbjct: 292 LFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSAT---NALIS 348
Query: 516 MYGK--CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR 573
MY + G++ ++ +F + +++I+W ++I+ G ++ A++ F + K D
Sbjct: 349 MYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDD 408
Query: 574 VALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY---GHLKEAEK 630
A A+L +C ++ G ++ +S V E + L+V Y G ++ A K
Sbjct: 409 YAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEF----VISSLIVMYSKCGIIESARK 464
Query: 631 IITTMPFPPNALIWRTFLEG 650
+ + + W + G
Sbjct: 465 CFQQISSKHSTVAWNAMILG 484
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 293 bits (749), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/535 (30%), Positives = 271/535 (50%), Gaps = 43/535 (8%)
Query: 163 IHGLVIKNGFDYELLVANSLVNMYFQCAGI-----------------WS----------- 194
+H VIK+GF E+ + N L++ Y +C + W+
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 195 ---AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINS 251
A+ +F+ + RD +WN+++ A+ + +AL + M + N+ +F V+++
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 252 CAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSW 311
C+GL + G +H+ + K+ DV++GSALVD Y+KC N+ A F E+ ++N+VSW
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 312 NALILGYASKSSPTSIFLLIEL-LQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIR 366
N+LI + + ++ L+ P+E T + V+ + + + ++H +++
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 367 MGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETV 425
+ +L + + YAK I +A ++ I + ++I+G Y
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG-YAMAASTKAAR 340
Query: 426 KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLC 485
+ +++ ++VSWN +IA NG+ +E L LF ++ + P +Y+F ++L AC+ L
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 486 NLALGSSLHGLIKKTEII-----SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
L LG H + K D FV N LIDMY KCG + +F +M +R+ ++
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS 460
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMN 600
W A+I NG+ ALE FREM G KPD + +I VL+AC H G V EG F M
Sbjct: 461 WNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMT 520
Query: 601 RSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
R +GV P DHY C+VDLL R G L+EA+ +I MP P+++IW + L C+ R
Sbjct: 521 RDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHR 575
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 149/578 (25%), Positives = 258/578 (44%), Gaps = 106/578 (18%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQLQASVLKNG 69
N +I AYS+CG +ED ++F M R +T+ ++
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNI----YTWNSVV--------------------- 93
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
T L L G LDE S+F MP + TWNS+VS F +H E+ + F
Sbjct: 94 ---------TGLTKL----GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
+ + L E SF V+ S D+ G Q+H L+ K+ F ++ + ++LV+MY +C
Sbjct: 141 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC 200
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A+++F ++ R+VVSWN++I ++ +AL+++ M V P++ T VI
Sbjct: 201 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 250 NSCAGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNL--------------- 293
++CA L +G+ +H +V+KN L D+ + +A VD YAKC +
Sbjct: 261 SACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNV 320
Query: 294 ----------------EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL- 336
+ A L F++++ +N+VSWNALI GY L LL+
Sbjct: 321 IAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDA 392
P ++F+++L++ L L H +++ G++ +SG D
Sbjct: 381 SVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK-------------FQSGEEDD- 426
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+ N + +Y + G E + ++ D VSWN +I A NG
Sbjct: 427 ------------IFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYG 474
Query: 453 KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS--DTFVC 510
E LELF+ M + PD+ T + +LSAC + G + + ++ D + C
Sbjct: 475 NEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTC 534
Query: 511 NMLIDMYGKCGSIGSSVKIFNEMT-DRNVITWTALISA 547
++D+ G+ G + + + EM + + W +L++A
Sbjct: 535 --MVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 239/492 (48%), Gaps = 78/492 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
MP+R+ ++NS++S +++ E+AL F M GF +++F +LS C LN + +G
Sbjct: 112 MPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG 171
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ + + K+ F +D ++G+AL+ +Y + G +++ VF++M +++V+WNS+++ F +
Sbjct: 172 VQVHSLIAKSP-FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQ 230
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELL 177
+G + + +F ++ S V E + VI ++ ++ G+++HG V+KN +++
Sbjct: 231 NGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDII 290
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEI-------------------------------RD 206
++N+ V+MY +C+ I A +F + I R+
Sbjct: 291 LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERN 350
Query: 207 VVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHA 266
VVSWN +I ++ +AL L+ + + V P +F ++ +CA L LG H
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHV 410
Query: 267 KVIKNAL------ECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS 320
V+K+ E D+FVG++L+D Y KC +E +L F ++ ++ VSWNA+I+G+A
Sbjct: 411 HVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ 470
Query: 321 KS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
++ L E+L+ G +P+ T VL
Sbjct: 471 NGYGNEALELFREMLESGEKPDHITMIGVL------------------------------ 500
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAGIYNRTGQYNETVKLLSQLE-RP 434
++ +G + + + +++ V P + + R G E ++ ++ +P
Sbjct: 501 -SACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQP 559
Query: 435 DIVSWNIVIAAC 446
D V W ++AAC
Sbjct: 560 DSVIWGSLLAAC 571
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 189/387 (48%), Gaps = 20/387 (5%)
Query: 226 ALELYLRMSVDIV-FPNQTTFVYVINSCAGLQ-NSILGKSIHAKVIKNALECDVFVGSAL 283
A + +L+++ D+ F + + F +++SC + ++I + +HA VIK+ ++F+ + L
Sbjct: 2 ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRL 61
Query: 284 VDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS---KSSPTSIFL-LIELLQLGYR 339
+D Y+KC +LE F ++ +NI +WN+++ G S+F + E Q +
Sbjct: 62 IDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWN 121
Query: 340 PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTAL 399
F+ R A L ++ + G+ EY S+++ A SGL
Sbjct: 122 SMVSGFAQHDRCEEA---LCYFAMMHKEGFVLNEYSFASVLS--ACSGLNDMNKGVQVHS 176
Query: 400 NIPRAVVPANIIAG-----IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
I ++ +++ G +Y++ G N+ ++ ++ ++VSWN +I NG E
Sbjct: 177 LIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVE 236
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
L++F+ M +R+ PD T S++SAC+ L + +G +HG + K + + +D + N +
Sbjct: 237 ALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFV 296
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
DMY KC I + IF+ M RNVI T++IS + + A F +M + + V
Sbjct: 297 DMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMA----ERNVV 352
Query: 575 ALIAVLTACRHGGLVREGMELFERMNR 601
+ A++ G E + LF + R
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKR 379
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 292 bits (748), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 193/656 (29%), Positives = 325/656 (49%), Gaps = 53/656 (8%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVL 66
FNS I+ S G + L F M+ P FTF LL +C SL + G + VL
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
NG F +D ++ ++L+ LY + G L VFE+M + +V W +++ + + G V +
Sbjct: 74 VNG-FSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
L E+ + + + ++ G+ L+ +H + GFD ++ V NS++N+Y
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLY 189
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+C + A+ +F +E RD+VSWNT+I A N + L+L RM D + P+Q TF
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 247 YVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK 306
++ + + +G+ +H +++K + D+ + +AL+ Y KC E ++ I NK
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309
Query: 307 NIVSWNALI-----LGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL- 360
++V W +I LG A K ++ + E+LQ G + + V+ S L
Sbjct: 310 DVVCWTVMISGLMRLGRAEK----ALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365
Query: 361 ---HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNR 417
H ++R GY L SL+T YAK G + +L +N
Sbjct: 366 ASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN----------------- 408
Query: 418 TGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP-DNYTFVS 476
ER D+VSWN +I+ A N D + L LF+ M+ + D++T VS
Sbjct: 409 --------------ER-DLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVS 453
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LL ACS L +G +H ++ ++ I + V L+DMY KCG + ++ + F+ ++ +
Sbjct: 454 LLQACSSAGALPVGKLIHCIVIRS-FIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK 512
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
+V++W LI+ G +G ALE + E G +P+ V +AVL++C H G+V++G+++F
Sbjct: 513 DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIF 572
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M R +GVEP +H CVVDLL R +++A K P+ + L+ C+
Sbjct: 573 SSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACR 628
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 229/473 (48%), Gaps = 22/473 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCD-SLNPVE-G 58
M R++VS+N++IS Y+ G + + L++ M G P Q TFG LS ++ +E G
Sbjct: 205 MEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L ++K G F D + TAL+ +Y + G + V E +P K +V W ++S +
Sbjct: 265 RMLHCQIVKTG-FDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMR 323
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E + +F E+++S L+ + V+ + + G +HG V+++G+ +
Sbjct: 324 LGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPA 383
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
NSL+ MY +C + + +F+ + RD+VSWN II A++ + KAL L+ M V
Sbjct: 384 LNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTV 443
Query: 239 FP-NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ T V ++ +C+ +GK IH VI++ + V +ALVD Y+KC LE A
Sbjct: 444 QQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQ 503
Query: 298 LCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS----S 352
CF IS K++VSW LI GY ++ + E L G PN F VL S
Sbjct: 504 RCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNG 563
Query: 353 LAFQLLQLHCLIIR-MGYE-NYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ Q L++ ++R G E N+E+ L ++ ++ I DA F N R P+
Sbjct: 564 MVQQGLKIFSSMVRDFGVEPNHEH-LACVVDLLCRAKRIEDAFKFYKE-NFTR---PSID 618
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+ GI + N + E DI+ +++ G Y ++ F M+
Sbjct: 619 VLGIILDACRAN------GKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMK 665
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 231/476 (48%), Gaps = 21/476 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M +R+VV + ++I YSR G V +A + M +G +P T +LS +E Q
Sbjct: 107 MRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLS----GVLEITQ 162
Query: 61 LQA----SVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
LQ +V+ F D V ++L LY + + + +F+ M ++ +V+WN+++S +
Sbjct: 163 LQCLHDFAVIYG--FDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGY 220
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G + + + L + + + +F + DLE G +H ++K GFD ++
Sbjct: 221 ASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDM 280
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ +L+ MY +C ++ ++ + + +DVV W +I L KAL ++ M
Sbjct: 281 HLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQS 340
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ V+ SCA L + LG S+H V+++ D ++L+ YAKC +L+ +
Sbjct: 341 GSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKS 400
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLG--YRPNEFTFSHVLRSSLA 354
+ F ++ +++VSWNA+I GYA LL E ++ + + FT +L++ +
Sbjct: 401 LVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSS 460
Query: 355 FQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
L +HC++IR V +L+ Y+K G + A +++ V +
Sbjct: 461 AGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGIL 520
Query: 411 IAGIYNRTGQYNETVKLLSQL----ERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
IAG Y G+ + +++ S+ P+ V + V+++C+HNG ++ L++F M
Sbjct: 521 IAG-YGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSM 575
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 130/318 (40%), Gaps = 42/318 (13%)
Query: 340 PNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
P+ FTF +L++ + Q L +H ++ G+ + Y+ SL+ YAK GL++ A
Sbjct: 44 PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHAR-- 101
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
K+ ++ D+V W +I + G E
Sbjct: 102 ------------------------------KVFEEMRERDVVHWTAMIGCYSRAGIVGEA 131
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
L MR I P T + +LS ++ L LH D V N +++
Sbjct: 132 CSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDF-AVIYGFDCDIAVMNSMLN 187
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
+Y KC +G + +F++M R++++W +IS G L+ M G +PD+
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQT 247
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
A L+ + G L ++ ++ G + +M ++ + ++ G + + +++ T+
Sbjct: 248 FGASLSVSGTMCDLEMGRMLHCQIVKT-GFDVDMHLKTALITMYLKCGKEEASYRVLETI 306
Query: 636 PFPPNALIWRTFLEGCQR 653
P + + W + G R
Sbjct: 307 P-NKDVVCWTVMISGLMR 323
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 292 bits (747), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 195/661 (29%), Positives = 325/661 (49%), Gaps = 45/661 (6%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
M R V ++ +ISA+++ AL +F M+ G P +FTF ++ SC L + G
Sbjct: 84 MSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYG 143
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV-SIFG 117
++ SV+K G F ++ VG++L LY + G E +F + ++W ++ S+ G
Sbjct: 144 GRVHGSVIKTG-FEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVG 202
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ E F + E+V++ V E +FV ++ G S+ LEFG+ IH +I G ++
Sbjct: 203 ARKWREALQF-YSEMVKAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSNIIVRGIPLNVV 260
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ SLV+ Y Q + + A ++ +DV W +++ + +A+ +L M
Sbjct: 261 LKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG 320
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE-GA 296
+ PN T+ +++ C+ +++ GK IH++ IK E VG+ALVD Y KC E A
Sbjct: 321 LQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEA 380
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLAF 355
F + + N+VSW LILG F LL+E+++ PN T S VLR+
Sbjct: 381 SRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKL 440
Query: 356 ----QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
++L++H ++R + V SL+ +YA S + A N+ R+
Sbjct: 441 RHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVD------YAWNVIRS------- 487
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
++R D +++ ++ G ++ L + YM I D
Sbjct: 488 -------------------MKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQ 528
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ +SA + L L G LH K+ S V N L+DMY KCGS+ + K+F
Sbjct: 529 LSLPGFISASANLGALETGKHLHCYSVKSG-FSGAASVLNSLVDMYSKCGSLEDAKKVFE 587
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
E+ +V++W L+S L NGF AL F EM +PD V + +L+AC +G L
Sbjct: 588 EIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDL 647
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G+E F+ M + Y +EP+++HY +V +L R G L+EA ++ TM PNA+I++T L C
Sbjct: 648 GLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRAC 707
Query: 652 Q 652
+
Sbjct: 708 R 708
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/486 (30%), Positives = 225/486 (46%), Gaps = 39/486 (8%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
G IH VIK G L + N+L+++Y + GIW+A K+F ++ R V +W +I A +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 220 SENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFV 279
S+ F AL L+ M PN+ TF V+ SCAGL++ G +H VIK E + V
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 280 GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG-YASKSSPTSIFLLIELLQLGY 338
GS+L D Y+KC + A FS + N + +SW +I ++ ++ E+++ G
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 339 RPNEFTFSHVLRSSLAFQL---LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAF 395
PNEFTF +L +S L +H II G
Sbjct: 222 PPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRG--------------------------- 254
Query: 396 VTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEV 455
IP VV + Y++ + + V++L+ D+ W V++ N KE
Sbjct: 255 -----IPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEA 309
Query: 456 LELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLID 515
+ F MR+ + P+N+T+ ++LS CS + +L G +H K S T V N L+D
Sbjct: 310 VGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS-TDVGNALVD 368
Query: 516 MYGKC-GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
MY KC S + ++F M NV++WT LI L +GF Q EM +P+ V
Sbjct: 369 MYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVV 428
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
L VL AC VR +E+ + R + V+ EM + +VD + A +I +
Sbjct: 429 TLSGVLRACSKLRHVRRVLEIHAYLLRRH-VDGEMVVGNSLVDAYASSRKVDYAWNVIRS 487
Query: 635 MPFPPN 640
M N
Sbjct: 488 MKRRDN 493
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 151/643 (23%), Positives = 276/643 (42%), Gaps = 78/643 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE-GA 59
+ + + +S+ +IS+ +AL+ + M+ G P +FTF LL S +E G
Sbjct: 185 LQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGK 244
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ ++++ G+ + + T+L+ Y + +++ V V + + W S+VS F ++
Sbjct: 245 TIHSNIIVRGI-PLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRN 303
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
++ + F E+ + ++ ++ S + L+FG+QIH IK GF+ V
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 180 NSLVNMYFQC-AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
N+LV+MY +C A A ++F + +VVSW T+I L + L + M V
Sbjct: 364 NALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN T V+ +C+ L++ IHA +++ ++ ++ VG++LVD YA ++ A
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWN 483
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQL 357
+ ++ +++ +L+ + +I + G R ++ + + +S
Sbjct: 484 VIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGA 543
Query: 358 LQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L+ LHC ++ G+ VL SL+ Y+K G + DA
Sbjct: 544 LETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDA--------------------- 582
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
K+ ++ PD+VSWN +++ A NG L F+ MR PD+ T
Sbjct: 583 -----------KKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVT 631
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F+ LLSACS LG ++KK I+N
Sbjct: 632 FLILLSACSNGRLTDLGLEYFQVMKK-----------------------------IYN-- 660
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+ V + L+ LG G R E +E + KP+ + +L ACR+ G + G
Sbjct: 661 IEPQVEHYVHLVGILGRAG---RLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGE 717
Query: 594 ELFERMNRSYGVEP-EMDHYHCVVDLLVRYGHLKEAEKIITTM 635
++ N+ + P + Y + DL G + A+K M
Sbjct: 718 DM---ANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLM 757
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 202/661 (30%), Positives = 322/661 (48%), Gaps = 46/661 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLN--PVEGA 59
R+V +NS+I Y + ++ + F M+ G P F+ ++S C N EG
Sbjct: 131 RDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGK 190
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKS-LVTWNSIVSIFGK 118
Q+ +L+N L D+F+ TAL+ +Y + G + VF ++ KS +V WN ++ FG
Sbjct: 191 QIHGFMLRNSL-DTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G E + L+ + V L +SF G + S ++ FG QIH V+K G + V
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
SL++MY +C + AE +F V + + WN ++ A AE++ AL+L+ M V
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ T VI+ C+ L GKS+HA++ K ++ + SAL+ Y+KC A+L
Sbjct: 370 LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 299 CFSEISNKNIVSWNALILGYASKSS---PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F + K++V+W +LI G +F ++ +P+ + V +
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 356 QL----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ LQ+H +I+ G +V SL+ Y+K GL AL
Sbjct: 490 EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL------------------ 531
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
K+ + + ++V+WN +I+ + N + ++LF M + I+PD+
Sbjct: 532 --------------KVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDS 577
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
+ S+L A S +L G SLHG + I SDT + N LIDMY KCG + IF
Sbjct: 578 VSITSVLVAISSTASLLKGKSLHGYTLRLG-IPSDTHLKNALIDMYVKCGFSKYAENIFK 636
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+M +++ITW +I G +G AL F EM+ G PD V +++++AC H G V E
Sbjct: 637 KMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEE 696
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G +FE M + YG+EP M+HY +VDLL R G L+EA I MP ++ IW L
Sbjct: 697 GKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSAS 756
Query: 652 Q 652
+
Sbjct: 757 R 757
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 176/665 (26%), Positives = 305/665 (45%), Gaps = 60/665 (9%)
Query: 8 SFNSIISAYSRCGYVEDALRMFLYMINRGFEP---TQFTFGGLL-SCDSL-NPVEGAQLQ 62
S NS I A + G AL LY + G P + FTF LL +C +L N G +
Sbjct: 26 SINSGIRALIQKGEYLQALH--LYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIH 83
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR-------KSLVTWNSIVSI 115
SV+ G + D F+ T+L+ +Y + G LD V VF+ + + + WNS++
Sbjct: 84 GSVVVLG-WRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDG 142
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDL--EFGEQIHGLVIKNGFD 173
+ K ++ + F ++ V S V+ + E + E G+QIHG +++N D
Sbjct: 143 YFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLD 202
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKALELYLR 232
+ + +L++MYF+ A ++F ++E + +VV WN +I S +L+LY+
Sbjct: 203 TDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYML 262
Query: 233 MSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN 292
+ V T+F + +C+ +NS G+ IH V+K L D +V ++L+ Y+KC
Sbjct: 263 AKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGM 322
Query: 293 LEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRS 351
+ A FS + +K + WNA++ YA S L + Q P+ FT S+V+
Sbjct: 323 VGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISC 382
Query: 352 SLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
L +H + + ++ + +L+T Y+K G DA
Sbjct: 383 CSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL------------- 429
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR--AA 465
+ +E D+V+W +I+ NG +KE L++F M+
Sbjct: 430 -------------------VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDD 470
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
+ PD+ S+ +AC+ L L G +HG + KT ++ + FV + LID+Y KCG
Sbjct: 471 SLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLV-LNVFVGSSLIDLYSKCGLPEM 529
Query: 526 SVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRH 585
++K+F M+ N++ W ++IS N + +++ F M G PD V++ +VL A
Sbjct: 530 ALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISS 589
Query: 586 GGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
+ +G L R G+ + + ++D+ V+ G K AE I M + + W
Sbjct: 590 TASLLKGKSLHGYTLR-LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQH-KSLITWN 647
Query: 646 TFLEG 650
+ G
Sbjct: 648 LMIYG 652
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 209/411 (50%), Gaps = 15/411 (3%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EGAQ 60
D+ + +N++++AY+ Y AL +F +M + P FT ++SC S+ + G
Sbjct: 335 DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKS 394
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ A + K + + + + +ALL LY + GC + VF+ M K +V W S++S K+G
Sbjct: 395 VHAELFKRPI-QSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNG 453
Query: 121 FVEDCMFLFCELVRSEVALTESS--FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
++ + +F ++ + +L S V + + + L FG Q+HG +IK G + V
Sbjct: 454 KFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFV 513
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+SL+++Y +C A K+F + ++V+WN++I + + +++L+ M +
Sbjct: 514 GSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGI 573
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
FP+ + V+ + + + + GKS+H ++ + D + +AL+D Y KC + A
Sbjct: 574 FPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAEN 633
Query: 299 CFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F ++ +K++++WN +I GY S T++ L E+ + G P++ TF ++ +
Sbjct: 634 IFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGF 693
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYA-------KSGLISDALAFVTALNI 401
++ I + +Y + M YA ++GL+ +A +F+ A+ I
Sbjct: 694 VEEGKNIFE--FMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPI 742
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 127/266 (47%), Gaps = 14/266 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP--VEG 58
M N+V++NS+IS YSR E ++ +F M+++G P + +L S ++G
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKG 596
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L L+ G+ +D + AL+ +Y + G ++F+ M KSL+TWN ++ +G
Sbjct: 597 KSLHGYTLRLGI-PSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGS 655
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKN-GFDYELL 177
HG + LF E+ ++ + + +F+ +I ++ +E G+ I + ++ G + +
Sbjct: 656 HGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNME 715
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIR-DVVSWNTIIGALAESENFGKAL---ELYLRM 233
++V++ + + A K + I D W ++ A N + E LRM
Sbjct: 716 HYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRM 775
Query: 234 SVDIVFPNQTTFVYVIN--SCAGLQN 257
+ +T+V +IN AGL+N
Sbjct: 776 EPE----RGSTYVQLINLYMEAGLKN 797
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 290 bits (742), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 193/661 (29%), Positives = 326/661 (49%), Gaps = 58/661 (8%)
Query: 12 IISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVLKNG 69
++ + R + +A+ ++ MI G +P + F LL + L +E G Q+ A V K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 70 LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
V L+ LY + G V VF+ + ++ V+WNS++S E + F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 130 CELVRSEVALTESSFVGVIHGLSN---EQDLEFGEQIHGLVIKNGFDYELLVANSLVNMY 186
++ V + + V V+ SN + L G+Q+H ++ G + + N+LV MY
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMY 246
Query: 187 FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFV 246
+ + S++ + RD+V+WNT++ +L ++E +ALE M ++ V P++ T
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 247 YVINSCAGLQNSILGKSIHAKVIKN-ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
V+ +C+ L+ GK +HA +KN +L+ + FVGSALVD Y C + F + +
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFD 366
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELLQ--LGYRPNEFTFSHVL----RSSLAFQLLQ 359
+ I WNA+I GY+ LL ++ G N T + V+ RS +
Sbjct: 367 RKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA 426
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+H +++ G + +V +LM +Y+R G
Sbjct: 427 IHGFVVKRGLDRDRFVQNTLMD--------------------------------MYSRLG 454
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR---------AARI--Y 468
+ + +++ ++E D+V+WN +I + +++ L L M+ A+R+
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P++ T +++L +C+ L LA G +H K + ++D V + L+DMY KCG + S K
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNL-ATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+F+++ +NVITW +I A G++G Q A++ R M G KP+ V I+V AC H G+
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN-ALIWRTF 647
V EG+ +F M YGVEP DHY CVVDLL R G +KEA +++ MP N A W +
Sbjct: 634 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693
Query: 648 L 648
L
Sbjct: 694 L 694
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 143/566 (25%), Positives = 267/566 (47%), Gaps = 51/566 (9%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQL 61
+RN VS+NS+IS+ E AL F M++ EP+ FT +++ C +L EG +
Sbjct: 161 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 62 QASVLKNGLFCAD--AFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
V GL + +F+ L+ +YG+ G L + + LVTWN+++S ++
Sbjct: 221 GKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELLV 178
+ + + E+V V E + V+ S+ + L G+++H +KNG D V
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI- 237
++LV+MY C + S ++F + R + WN +I +++E+ +AL L++ M
Sbjct: 341 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAG 400
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ N TT V+ +C ++IH V+K L+ D FV + L+D Y++ ++ A
Sbjct: 401 LLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAM 460
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ------------LGYRPNEFTF 345
F ++ ++++V+WN +I GY LL+ +Q + +PN T
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 520
Query: 346 SHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+L S A L G E + Y + K+ L +D V
Sbjct: 521 MTILPSCAALSALA-------KGKEIHAYAI--------KNNLATD-------------V 552
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+ + +Y + G + K+ Q+ + ++++WN++I A +G+ +E ++L + M
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 612
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSI 523
+ P+ TF+S+ +ACS + G + ++K + SSD + C ++D+ G+ G I
Sbjct: 613 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC--VVDLLGRAGRI 670
Query: 524 GSSVKIFNEMT-DRNVI-TWTALISA 547
+ ++ N M D N W++L+ A
Sbjct: 671 KEAYQLMNMMPRDFNKAGAWSSLLGA 696
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 195/445 (43%), Gaps = 33/445 (7%)
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
W ++ + S +A+ Y+ M V + P+ F ++ + A LQ+ LGK IHA V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 270 KNALECD-VFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYAS-KSSPTSI 327
K D V V + LV+ Y KC + + F IS +N VSWN+LI S + ++
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 328 FLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
+L P+ FT V+ + + + + MG + + Y L + G
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPE----GLMMGKQVHAYGL--------RKG 232
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
++ +F+ N + +Y + G+ + LL D+V+WN V+++
Sbjct: 233 ELN---SFII-----------NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
N E LE + M + PD +T S+L ACS L L G LH K + ++
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREM-EF 566
FV + L+DMY C + S ++F+ M DR + W A+I+ N + AL F M E
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 567 LGFKPDRVALIAVLTAC-RHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
G + + V+ AC R G R+ E G++ + + ++D+ R G +
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRK--EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI 456
Query: 626 KEAEKIITTMPFPPNALIWRTFLEG 650
A +I M + + W T + G
Sbjct: 457 DIAMRIFGKME-DRDLVTWNTMITG 480
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 138/269 (51%), Gaps = 19/269 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYM-INRGFEPTQFTFGGLL-SCDSLNPVEG 58
M DR + +N++I+ YS+ + ++AL +F+ M + G T G++ +C
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 59 AQ-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS--I 115
+ + V+K GL D FV L+ +Y R G +D + +F M + LVTWN++++ +
Sbjct: 424 KEAIHGFVVKRGLD-RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482
Query: 116 FGKHGFVEDCMFLFCELVR---------SEVALTESS--FVGVIHGLSNEQDLEFGEQIH 164
F +H ED + L ++ S V+L +S + ++ + L G++IH
Sbjct: 483 FSEHH--EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 165 GLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG 224
IKN ++ V ++LV+MY +C + + K+F + ++V++WN II A N
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 225 KALELYLRMSVDIVFPNQTTFVYVINSCA 253
+A++L M V V PN+ TF+ V +C+
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACS 629
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 7/229 (3%)
Query: 427 LLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN 486
+SQ P+ W ++ + + +E + + M I PDNY F +LL A + L +
Sbjct: 55 FISQSRSPEW--WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQD 112
Query: 487 LALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALIS 546
+ LG +H + K V N L+++Y KCG G+ K+F+ +++RN ++W +LIS
Sbjct: 113 MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172
Query: 547 ALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVE 606
+L + ALE FR M +P L++V+TAC + + EG+ + ++++ +YG+
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQVH-AYGLR 230
Query: 607 PEMDHYHCVVDLLVRYGHL-KEAEKIITTMPFPPNALI-WRTFLEG-CQ 652
+ + L+ YG L K A + F L+ W T L CQ
Sbjct: 231 KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 40/251 (15%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMIN------RG-----FEPTQFTFGGLL- 48
M DR++V++N++I+ Y + EDAL + M N +G +P T +L
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 49 SCDSLNPV-EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLV 107
SC +L+ + +G ++ A +KN L D VG+AL+ +Y + GCL VF+ +P+K+++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNL-ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVI 584
Query: 108 TWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLV 167
TWN I+ +G HG ++ + L ++ V E +F+ V S+ ++ G +I V
Sbjct: 585 TWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YV 643
Query: 168 IKNGFDYE------------------LLVANSLVNMY---FQCAGIWS----AEKMFKDV 202
+K + E + A L+NM F AG WS A ++ ++
Sbjct: 644 MKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNL 703
Query: 203 EIRDVVSWNTI 213
EI ++ + N I
Sbjct: 704 EIGEIAAQNLI 714
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 288 bits (738), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 176/551 (31%), Positives = 296/551 (53%), Gaps = 9/551 (1%)
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
+NS++ + G + + LF ++ S ++ + +F + + + G QIHGL++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
K G+ +L V NSLV+ Y +C + SA K+F ++ R+VVSW ++I A + A++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 229 LYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
L+ RM D V PN T V VI++CA L++ G+ ++A + + +E + + SALVD Y
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFS 346
KC+ ++ A F E N+ NA+ Y + + ++ + ++ G RP+ +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 347 HVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIP 402
+ S + + H ++R G+E+++ + +L+ Y K A ++
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 403 RAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
V +I+AG Y G+ + + + +IVSWN +I+ ++E +E+F M
Sbjct: 402 TVVTWNSIVAG-YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 463 RAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
++ + D T +S+ SAC L L L ++ I+K I D + L+DM+ +CG
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGI-QLDVRLGTTLVDMFSRCG 519
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
S++ IFN +T+R+V WTA I A+ + G A+RA+E F +M G KPD VA + LT
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNA 641
AC HGGLV++G E+F M + +GV PE HY C+VDLL R G L+EA ++I MP PN
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 642 LIWRTFLEGCQ 652
+IW + L C+
Sbjct: 640 VIWNSLLAACR 650
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/582 (25%), Positives = 281/582 (48%), Gaps = 12/582 (2%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSC-DSLNPVEGAQLQASVL 66
+NS+I Y+ G +A+ +FL M+N G P ++TF GL +C S G Q+ ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K G + D FV +L+ Y G LD VF++M +++V+W S++ + + F +D +
Sbjct: 162 KMG-YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 127 FLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNM 185
LF +VR E S + V VI + +DLE GE+++ + +G + L+ ++LV+M
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTF 245
Y +C I A+++F + ++ N + +AL ++ M V P++ +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 246 VYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN 305
+ I+SC+ L+N + GKS H V++N E + +AL+D Y KC + A F +SN
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 306 KNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLLQLHCLI 364
K +V+WN+++ GY + + E + + S +++ SL + +++ C +
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 365 IRMGYENYEYV-LGSLMTSYAKSGLISDA---LAFVTALNIPRAVVPANIIAGIYNRTGQ 420
N + V + S+ ++ G + A ++ I V + +++R G
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 421 YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSA 480
+ + + L D+ +W I A A G+ + +ELF M + PD FV L+A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 481 CSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT-DRNVI 539
CS + G + + K +S + ++D+ G+ G + +V++ +M + N +
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640
Query: 540 TWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
W +L++A + G + A +++ L P+R +L+
Sbjct: 641 IWNSLLAACRVQGNVEMAAYAAEKIQVLA--PERTGSYVLLS 680
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 231/492 (46%), Gaps = 73/492 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMI-NRGFEPTQFTFGGLLS-CDSLNPVE- 57
M +RNVVS+ S+I Y+R + +DA+ +F M+ + P T ++S C L +E
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G ++ A + +G+ D V +AL+ +Y + +D +F++ +L N++ S +
Sbjct: 255 GEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G + + +F ++ S V S + I S +++ +G+ HG V++NGF+
Sbjct: 314 RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN 373
Query: 178 VANSLVNMYFQC-------------------------AG------IWSAEKMFKDVEIRD 206
+ N+L++MY +C AG + +A + F+ + ++
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 207 VVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
+VSWNTII L + F +A+E++ M S + V + T + + ++C L L K I+
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY 493
Query: 266 AKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWN-ALILGYASKSSP 324
+ KN ++ DV +G+ LVD +++C + E A F+ ++N+++ +W A+ + ++
Sbjct: 494 YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAE 553
Query: 325 TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA 384
+I L ++++ G +P+ F +G+L T+ +
Sbjct: 554 RAIELFDDMIEQGLKPDGVAF------------------------------VGAL-TACS 582
Query: 385 KSGLISDALAFVTALNIPRAVVPANIIAG----IYNRTGQYNETVKLLSQLE-RPDIVSW 439
GL+ ++ V P ++ G + R G E V+L+ + P+ V W
Sbjct: 583 HGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIW 642
Query: 440 NIVIAACAHNGD 451
N ++AAC G+
Sbjct: 643 NSLLAACRVQGN 654
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 131/268 (48%), Gaps = 13/268 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINR-GFEPTQFTFGGLLS-CDSLNPVEG 58
MP++N+VS+N+IIS + E+A+ +F M ++ G T + S C L ++
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 59 AQ-LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
A+ + + KNG+ D +GT L+ ++ R G + +S+F + + + W + +
Sbjct: 489 AKWIYYYIEKNGIQL-DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMA 547
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK-NGFDYEL 176
G E + LF +++ + +FVG + S+ ++ G++I ++K +G E
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPED 607
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKD--VEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ +V++ + + A ++ +D +E DV+ WN+++ A N A Y
Sbjct: 608 VHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQGNVEMA--AYAAEK 664
Query: 235 VDIVFPNQT-TFVYVIN--SCAGLQNSI 259
+ ++ P +T ++V + N + AG N +
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDM 692
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 283 bits (723), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 185/633 (29%), Positives = 312/633 (49%), Gaps = 58/633 (9%)
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
D + A L + G L E VF+ MP + +V+WN+++S+ + GF E + ++ +V
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
+ + V+ S D FG + HG+ +K G D + V N+L++MY +C I
Sbjct: 131 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIV 190
Query: 194 S-AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-----SVD-IVFPNQTTFV 246
++F+ + + VS+ +IG LA +A++++ M VD + N +
Sbjct: 191 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 250
Query: 247 YVINSCAGLQN---SILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEI 303
C L + LGK IH ++ D+ + ++L++ YAK ++ GA L F+E+
Sbjct: 251 APREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEM 310
Query: 304 SNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAFQLL 358
N+VSWN +I+G+ + S S+ L + G++PNE T VL RS
Sbjct: 311 PEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR 370
Query: 359 QLHCLIIR----------MGYENYEY---------------------VLGSLMTSYAKSG 387
++ I + GY NYE+ L +++S A+
Sbjct: 371 RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLR 430
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL-LSQ------LERPDIVSWN 440
+ + ++I++G+ Y+E K+ +S+ + DI WN
Sbjct: 431 FLEGGKQIHGVVIRTEISKNSHIVSGL---IAVYSECEKMEISECIFDDCINELDIACWN 487
Query: 441 IVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
+I+ HN + L LF+ M + A + P+ +F ++LS+CS+LC+L G HGL+ K
Sbjct: 488 SMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVK 547
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALE 559
+ +S D+FV L DMY KCG I S+ + F+ + +N + W +I G NG A+
Sbjct: 548 SGYVS-DSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVG 606
Query: 560 KFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLL 619
+R+M G KPD + ++VLTAC H GLV G+E+ M R +G+EPE+DHY C+VD L
Sbjct: 607 LYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCL 666
Query: 620 VRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
R G L++AEK+ P+ ++++W L C+
Sbjct: 667 GRAGRLEDAEKLAEATPYKSSSVLWEILLSSCR 699
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 135/574 (23%), Positives = 254/574 (44%), Gaps = 87/574 (15%)
Query: 160 GEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTI------ 213
G+ IHG +++ G + + N L+++Y +C A K+F ++ +RDV SWN
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 214 IGALAES-ENFG------------------------KALELYLRMSVDIVFPNQTTFVYV 248
+G L E+ E F KAL +Y RM D P++ T V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 249 INSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL-EGAHLCFSEISNKN 307
+++C+ + + + G H +K L+ ++FVG+AL+ YAKC + + F +S N
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 308 IVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSSLAFQLL-------- 358
VS+ A+I G A ++ + L+ + G + + S++L S +
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 359 -----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAF-------VTALNI---- 401
Q+HCL +R+G+ ++ SL+ YAK+ ++ A L F V + NI
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 402 -----------------------PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
P V +++ + R+G ++ S + +P + +
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACF-RSGDVETGRRIFSSIPQPSVSA 383
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
WN +++ ++ Y+E + F+ M+ + PD T +LS+C++L L G +HG++
Sbjct: 384 WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI 443
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE-MTDRNVITWTALISALGLNGFAQRA 557
+TE IS ++ + + LI +Y +C + S IF++ + + ++ W ++IS N +A
Sbjct: 444 RTE-ISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKA 502
Query: 558 LEKFREMEFLG-FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVV 616
L FR M P+ + VL++C + G + + +S V +
Sbjct: 503 LILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVET-ALT 561
Query: 617 DLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
D+ + G + A + + N +IW + G
Sbjct: 562 DMYCKCGEIDSARQFFDAV-LRKNTVIWNEMIHG 594
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 135/587 (22%), Positives = 263/587 (44%), Gaps = 98/587 (16%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-------CDSLNPVE 57
N VS+ ++I +R V +A++MF M +G + +LS CDSL+ +
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 58 GAQLQASV----LKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
G +L + L+ G F D + +LL +Y ++ ++ +F +MP ++V+WN ++
Sbjct: 264 GNELGKQIHCLALRLG-FGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI 322
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
FG+ +++ +EF ++ +GF
Sbjct: 323 VGFGQE-------------------------------YRSDKSVEFLTRMR----DSGFQ 347
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
+ S++ F+ + + ++F + V +WN ++ + E++ +A+ + +M
Sbjct: 348 PNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQM 407
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ P++TT +++SCA L+ GK IH VI+ + + + S L+ Y++C+ +
Sbjct: 408 QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKM 467
Query: 294 EGAHLCFSEISNK-NIVSWNALILGYASKSSPTSIFLLIELLQLGYR--PNEFTFSHVLR 350
E + F + N+ +I WN++I G+ T +L + PNE +F+ VL
Sbjct: 468 EISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLS 527
Query: 351 S-SLAFQLL---QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVV 406
S S LL Q H L+++ GY + +V +L Y K G I A F A+ V+
Sbjct: 528 SCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVI 587
Query: 407 PANIIAGIYNRTGQYNETV----KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
+I G Y G+ +E V K++S E+PD +++ V+ AC+H+G + LE+ M
Sbjct: 588 WNEMIHG-YGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSM 646
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
+ +HG+ + E+ D ++C ++D G+ G
Sbjct: 647 Q----------------------------RIHGI--EPEL---DHYIC--IVDCLGRAGR 671
Query: 523 IGSSVKIFNEMTDR-NVITWTALISALGLNG---FAQRALEKFREME 565
+ + K+ + + + W L+S+ ++G A+R EK ++
Sbjct: 672 LEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLD 718
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 217/511 (42%), Gaps = 76/511 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP+ NVVS+N +I + + + ++ M + GF+P + T
Sbjct: 310 MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTC---------------- 353
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
++LG R G ++ +F +P+ S+ WN+++S + +
Sbjct: 354 ------------------ISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYE 395
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
E+ + F ++ + +++ ++ + + LE G+QIHG+VI+ + +
Sbjct: 396 HYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVS 455
Query: 181 SLVNMYFQCAGIWSAEKMFKD-VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
L+ +Y +C + +E +F D + D+ WN++I + KAL L+ RM V
Sbjct: 456 GLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVL 515
Query: 240 -PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+T+F V++SC+ L + + G+ H V+K+ D FV +AL D Y KC ++ A
Sbjct: 516 CPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQ 575
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
F + KN V WN +I GY ++ L +++ G +P+ TF VL
Sbjct: 576 FFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVL-------- 627
Query: 358 LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----NIIAG 413
T+ + SGL+ L ++++ + P I
Sbjct: 628 -----------------------TACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVD 664
Query: 414 IYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
R G+ + KL + V W I++++C +GD + + + R+ P +
Sbjct: 665 CLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAE--KLMRLDPQSS 722
Query: 473 TFVSLLSAC-SKLCNLALGSSLHGLIKKTEI 502
LLS S L ++L GL+ K +
Sbjct: 723 AAYVLLSNTYSSLRQWDDSAALQGLMNKNRV 753
>sp|Q9M2Y4|PP276_ARATH Pentatricopeptide repeat-containing protein At3g49740
OS=Arabidopsis thaliana GN=PCMP-E84 PE=2 SV=1
Length = 737
Score = 283 bits (723), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 204/698 (29%), Positives = 337/698 (48%), Gaps = 97/698 (13%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINR--GFEPTQFTFG-GLLSCDSL-NPVEGAQ 60
+++ N ++ +R G +AL++F ++R P Q++ + + L + + G Q
Sbjct: 20 TLLNLNRRLTGLTRSGENRNALKLFAD-VHRCTTLRPDQYSVSLAITTARHLRDTIFGGQ 78
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCL-------DEV------------------- 94
+ +++GL C + V LL LY R G L DE+
Sbjct: 79 VHCYAIRSGLLC-HSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLG 137
Query: 95 -----VSVFEDMP-RKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVI 148
VF+ MP R + WN++++ + G+ E + LF E+ + V + F ++
Sbjct: 138 DIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL 197
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFK--DVEIRD 206
+ + L+FG+Q+H LVIK GF V N+L+ MYF C + A +F+ DV +RD
Sbjct: 198 -SMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRD 256
Query: 207 VVSWNTIIGALAESEN------FGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSIL 260
V++N +I LA + F K LE LR P TFV V+ SC+ + +
Sbjct: 257 QVTFNVVIDGLAGFKRDESLLVFRKMLEASLR-------PTDLTFVSVMGSCSC---AAM 306
Query: 261 GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY-A 319
G +H IK E V +A + Y+ ++ AH F + K++V+WN +I Y
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 320 SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL-HCLIIRMGYENYEYVLGS 378
+K +++ + + +G +P+EFTF +L +SL +L++ II+ G
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFG---------- 416
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
+ + I A++ A Y++ GQ + L + R +++S
Sbjct: 417 ----------------LSSKIEISNALISA------YSKNGQIEKADLLFERSLRKNLIS 454
Query: 439 WNIVIAACAHNGDYKEVLELFKYM--RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
WN +I+ HNG E LE F + RI PD YT +LLS C +L LGS H
Sbjct: 455 WNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAY 514
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQR 556
+ + +T + N LI+MY +CG+I +S+++FN+M++++V++W +LISA +G +
Sbjct: 515 VLRHGQFK-ETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGEN 573
Query: 557 ALEKFREMEFLG-FKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
A+ ++ M+ G PD AVL+AC H GLV EG+E+F M +GV +DH+ C+
Sbjct: 574 AVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCL 633
Query: 616 VDLLVRYGHLKEAEKI--ITTMPFPPNALIWRTFLEGC 651
VDLL R GHL EAE + I+ +W C
Sbjct: 634 VDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSAC 671
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 161/574 (28%), Positives = 282/574 (49%), Gaps = 69/574 (12%)
Query: 1 MPDRNVVS-FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEG 58
MP+R+ V+ +N++I+ GY E ++ +F M G +F F +LS CD + G
Sbjct: 149 MPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFG 208
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE--DMPRKSLVTWNSIVSIF 116
Q+ + V+K G F A + V AL+ +Y + + VFE D+ + VT+N ++
Sbjct: 209 KQVHSLVIKAGFFIASSVV-NALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVID-- 265
Query: 117 GKHGFVED-CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
G GF D + +F +++ + + T+ +FV V+ S G Q+HGL IK G++
Sbjct: 266 GLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKY 322
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
LV+N+ + MY +A K+F+ +E +D+V+WNT+I + +++ A+ +Y RM +
Sbjct: 323 TLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHI 382
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V P++ TF ++ + L + + + A +IK L + + +AL+ Y+K +E
Sbjct: 383 IGVKPDEFTFGSLLATSLDLD---VLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEK 439
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE----LLQLGYR--PNEFTFSHVL 349
A L F KN++SWNA+I G+ P F +E LL+ R P+ +T S +L
Sbjct: 440 ADLLFERSLRKNLISWNAIISGFYHNGFP---FEGLERFSCLLESEVRILPDAYTLSTLL 496
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
++ L L G + + YVL + G + L N
Sbjct: 497 SICVSTSSLML-------GSQTHAYVL--------RHGQFKETLI-------------GN 528
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR-AARIY 468
+ +Y++ G ++++ +Q+ D+VSWN +I+A + +G+ + + +K M+ ++
Sbjct: 529 ALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVI 588
Query: 469 PDNYTFVSLLSACSKLCNLALGSSL-------HGLIKKTEIISSDTFVCNMLIDMYGKCG 521
PD TF ++LSACS + G + HG+I+ D F C L+D+ G+ G
Sbjct: 589 PDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNV-----DHFSC--LVDLLGRAG 641
Query: 522 SIG---SSVKIFNEMTDRNVITWTALISALGLNG 552
+ S VKI + V W AL SA +G
Sbjct: 642 HLDEAESLVKISEKTIGSRVDVWWALFSACAAHG 675
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 151/645 (23%), Positives = 260/645 (40%), Gaps = 132/645 (20%)
Query: 90 CLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGV-I 148
CL E +S + +L+ N ++ + G + + LF ++ R + V + I
Sbjct: 6 CLTESLSAIAE-NSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAI 64
Query: 149 HGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVV 208
+ +D FG Q+H I++G V+N+L+++Y + + S +K F +++ DV
Sbjct: 65 TTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVY 124
Query: 209 SWNTIIGALAESENFGKALELYLRM------------------------SVDI------- 237
SW T++ A + + A E++ +M SV++
Sbjct: 125 SWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKL 184
Query: 238 -VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V ++ F +++ C + GK +H+ VIK V +AL+ Y C + A
Sbjct: 185 GVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDA 243
Query: 297 HLCFSE--ISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SL 353
L F E ++ ++ V++N +I G A S+ + ++L+ RP + TF V+ S S
Sbjct: 244 CLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSC 303
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
A Q+H L I+ GYE Y V + MT
Sbjct: 304 AAMGHQVHGLAIKTGYEKYTLVSNATMT-------------------------------- 331
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y+ + K+ LE D+V+WN +I++ K + ++K M + PD +T
Sbjct: 332 MYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFT 391
Query: 474 FVSLLSACSKLCNLALGSSL---HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
F SLL+ L L + + GL K EI N LI Y K G I + +F
Sbjct: 392 FGSLLATSLDLDVLEMVQACIIKFGLSSKIEI-------SNALISAYSKNGQIEKADLLF 444
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKF-----REMEFLGFKPDRVALIAVLTAC-- 583
+N+I+W A+IS NGF LE+F E+ L PD L +L+ C
Sbjct: 445 ERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRIL---PDAYTLSTLLSICVS 501
Query: 584 ---------------RHG------------------GLVREGMELFERMNRSYGVEPEMD 610
RHG G ++ +E+F +M+ E ++
Sbjct: 502 TSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMS-----EKDVV 556
Query: 611 HYHCVVDLLVRYGHLKEAEKIITTM----PFPPNALIWRTFLEGC 651
++ ++ R+G + A TM P+A + L C
Sbjct: 557 SWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSAC 601
>sp|Q9SII7|PP159_ARATH Pentatricopeptide repeat-containing protein At2g17210
OS=Arabidopsis thaliana GN=PCMP-E77 PE=2 SV=2
Length = 736
Score = 280 bits (716), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 187/606 (30%), Positives = 309/606 (50%), Gaps = 51/606 (8%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
+G +QAS+LK G F + VG ++ Y + G L + F+ M + V+WN IV
Sbjct: 65 QGRCIQASLLKRG-FESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGL 123
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF-GEQIHGLVIKNGFDYE 175
+GF E+ ++ F +L S+ V VIH + L F GE+IHG VI++GF
Sbjct: 124 LDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHAC---RSLWFDGEKIHGYVIRSGFCGI 180
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
V NS++ MY + SA K+F ++ RDV+SW+ +I + +S+ L+L+ M
Sbjct: 181 SSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVH 239
Query: 236 DI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE-CDVFVGSALVDFYAKCDNL 293
+ P+ T V+ +C +++ +G+S+H I+ + DVFV ++L+D Y+K ++
Sbjct: 240 EAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDV 299
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRSS 352
+ A F E + +NIVSWN+++ G+ + L+ Q +E T +LR
Sbjct: 300 DSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 359
Query: 353 LAFQ----LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
F+ +H +IIR GYE+ E L SL+ +Y L+ DA
Sbjct: 360 KFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGT-------------- 405
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+L + D+VS + +I+ AH G E + +F +MR
Sbjct: 406 ------------------VLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT--- 444
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
P+ T +SLL+ACS +L HG+ + + +D V ++D Y KCG+I + +
Sbjct: 445 PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARR 504
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
F+++T++N+I+WT +ISA +NG +AL F EM+ G+ P+ V +A L+AC HGGL
Sbjct: 505 TFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGL 564
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP--FPPNALIWRT 646
V++G+ +F+ M +P + HY C+VD+L R G + A ++I +P A W
Sbjct: 565 VKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGA 623
Query: 647 FLEGCQ 652
L GC+
Sbjct: 624 ILSGCR 629
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 139/560 (24%), Positives = 263/560 (46%), Gaps = 53/560 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGA 59
M R+ VS+N I+ G+ E+ L F + GFEP T ++ +C SL +G
Sbjct: 108 MNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL-WFDGE 166
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ V+++G FC + V ++L +Y L +F++M + +++W+ ++ + +
Sbjct: 167 KIHGYVIRSG-FCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQS 224
Query: 120 GFVEDCMFLFCELVRSEVALTESSFV---GVIHGLSNEQDLEFGEQIHGLVIKNGFDY-E 175
+ LF E+V A TE V V+ + +D++ G +HG I+ GFD +
Sbjct: 225 KEPVVGLKLFKEMVHE--AKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLAD 282
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V NSL++MY + + SA ++F + R++VSWN+I+ ++ + +ALE++ M
Sbjct: 283 VFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQ 342
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ V ++ T V ++ C + + KSIH +I+ E + S+L+D Y C ++
Sbjct: 343 EAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDD 402
Query: 296 AHLCFSEISNKNIVSWNALI--LGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSS 352
A ++ K++VS + +I L +A +S SIF + PN T +L
Sbjct: 403 AGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFC-----HMRDTPNAITVISLL--- 454
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGL-ISDALAFVTALNIPRAVVPANII 411
N V L TS G+ I +LA + +++ ++V A
Sbjct: 455 ------------------NACSVSADLRTSKWAHGIAIRRSLA-INDISVGTSIVDA--- 492
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
Y + G + Q+ +I+SW ++I+A A NG + L LF M+ P+
Sbjct: 493 ---YAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNA 549
Query: 472 YTFVSLLSACSKLCNLALGSSL-HGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
T+++ LSAC+ + G + ++++ S + C ++DM + G I ++V++
Sbjct: 550 VTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSC--IVDMLSRAGEIDTAVELI 607
Query: 531 NEMTDR---NVITWTALISA 547
+ + W A++S
Sbjct: 608 KNLPEDVKAGASAWGAILSG 627
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 201/476 (42%), Gaps = 79/476 (16%)
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
W ++ +E + G + F + F V +CA L G+ I A ++
Sbjct: 27 WREVVSGYSEIQRAG------------VQFNDPFVFPIVFKACAKLSWLFQGRCIQASLL 74
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIF 328
K E V VG+++ DFY KC +L F +++++ VSWN ++ G ++
Sbjct: 75 KRGFESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLW 134
Query: 329 LLIELLQLGYRPNEFTFSHVLRS--SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
+L G+ PN T V+ + SL F ++H +IR G+ V S++ YA S
Sbjct: 135 WFSKLRVWGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADS 194
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
+S KL ++ D++SW++VI +
Sbjct: 195 DSLS---------------------------------ARKLFDEMSERDVISWSVVIRSY 221
Query: 447 AHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
+ + L+LFK M A+ PD T S+L AC+ + ++ +G S+HG + +
Sbjct: 222 VQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLA 281
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
D FVCN LIDMY K + S+ ++F+E T RN+++W ++++ N ALE F M
Sbjct: 282 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 341
Query: 566 FLGFKPDRVALIAVLTACR-----------HGGLVREGMELFE----RMNRSYGVEPEMD 610
+ D V ++++L C+ HG ++R G E E + +Y +D
Sbjct: 342 QEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVD 401
Query: 611 HYHCVVDL---------------LVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
V+D L G EA I M PNA+ + L C
Sbjct: 402 DAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNAC 457
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 449 NGDYKEVLELF-KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSD 506
+G ++EV+ + + RA + D + F + AC+KL L G + L+K+ S
Sbjct: 24 SGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRCIQASLLKRG--FESF 81
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
V N + D Y KCG + S ++ F+ M R+ ++W ++ L GF + L F ++
Sbjct: 82 VSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 141
Query: 567 LGFKPDRVALIAVLTACR---------HGGLVREG 592
GF+P+ L+ V+ ACR HG ++R G
Sbjct: 142 WGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSG 176
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 277 bits (709), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 187/647 (28%), Positives = 332/647 (51%), Gaps = 54/647 (8%)
Query: 19 CGYVEDALRMFLYMINRGFEPTQFTFGGLL-----SCDSLNPVEGAQLQASVLKNGLFCA 73
C ++ A+ ++ +++ + ++F F +L S + L+ G ++ ++K G+
Sbjct: 78 CHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSV--GGKVHGRIIKGGVD-D 134
Query: 74 DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELV 133
DA + T+LL +YG+ G L + VF+ MP + LV W+++VS ++G V + +F +V
Sbjct: 135 DAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMV 194
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
V + + V+ G + L +HG + + FD + + NSL+ MY +C +
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLL 254
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
S+E++F+ + ++ VSW +I + E KAL + M + PN T V++SC
Sbjct: 255 SSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCG 314
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGS-ALVDFYAKCDNLEGAHLCFSEISNKNIVSWN 312
+ GKS+H ++ L+ + S ALV+ YA+C L +S++NIV+WN
Sbjct: 315 LIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWN 374
Query: 313 ALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRM 367
+LI YA + ++ L +++ +P+ FT + + + L+ Q+H +IR
Sbjct: 375 SLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT 434
Query: 368 GYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKL 427
+ E+V SL+ Y+KSG + A + ++N
Sbjct: 435 DVSD-EFVQNSLIDMYSKSGSVDSA-------------------STVFN----------- 463
Query: 428 LSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNL 487
Q++ +V+WN ++ + NG+ E + LF YM + + + TF++++ ACS + +L
Sbjct: 464 --QIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSL 521
Query: 488 ALGSSLHGLIKKTEIIS--SDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALI 545
G +H + IIS D F LIDMY KCG + ++ +F M+ R++++W+++I
Sbjct: 522 EKGKWVHHKL----IISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMI 577
Query: 546 SALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGV 605
+A G++G A+ F +M G KP+ V + VL+AC H G V EG F M +S+GV
Sbjct: 578 NAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGV 636
Query: 606 EPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
P +H+ C +DLL R G LKEA + I MPF +A +W + + GC+
Sbjct: 637 SPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCR 683
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 169/594 (28%), Positives = 284/594 (47%), Gaps = 45/594 (7%)
Query: 49 SCDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVT 108
SC SL V +QL A +L G D T L+ Y G D VFE P
Sbjct: 10 SCSSLRLV--SQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFM 67
Query: 109 WNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD-LEFGEQIHGLV 167
+ ++ ++ + L+ LV +++ F V+ + ++ L G ++HG +
Sbjct: 68 YGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRI 127
Query: 168 IKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKAL 227
IK G D + ++ SL+ MY Q + AEK+F + +RD+V+W+T++ + E+ KAL
Sbjct: 128 IKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKAL 187
Query: 228 ELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFY 287
++ M D V P+ T + V+ CA L + +S+H ++ + + D + ++L+ Y
Sbjct: 188 RMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMY 247
Query: 288 AKCDNLEGAHLCFSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFS 346
+KC +L + F +I+ KN VSW A+I Y + S ++ E+++ G PN T
Sbjct: 248 SKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLY 307
Query: 347 HVLRSSLAFQLLQ----LHCLIIRMGYE-NYEYVLGSLMTSYAKSGLISDALAFVTALNI 401
VL S L++ +H +R + NYE + +L+ YA+ G +SD
Sbjct: 308 SVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDC--------- 358
Query: 402 PRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKY 461
ETV L + +IV+WN +I+ AH G + L LF+
Sbjct: 359 ---------------------ETV--LRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQ 395
Query: 462 MRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCG 521
M RI PD +T S +SAC + LG +HG + +T++ SD FV N LIDMY K G
Sbjct: 396 MVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV--SDEFVQNSLIDMYSKSG 453
Query: 522 SIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
S+ S+ +FN++ R+V+TW +++ NG + A+ F M + + V +AV+
Sbjct: 454 SVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQ 513
Query: 582 ACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
AC G + +G + ++ S + D ++D+ + G L AE + M
Sbjct: 514 ACSSIGSLEKGKWVHHKLIISGLKDLFTD--TALIDMYAKCGDLNAAETVFRAM 565
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 250/498 (50%), Gaps = 14/498 (2%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
MP R++V++++++S+ G V ALRMF M++ G EP T ++ C L + A
Sbjct: 162 MPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIA 221
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
+ + +F D + +LL +Y + G L +FE + +K+ V+W +++S + +
Sbjct: 222 RSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRG 281
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD--YELL 177
F E + F E+++S + + V+ + G+ +HG ++ D YE L
Sbjct: 282 EFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESL 341
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+ +LV +Y +C + E + + V R++V+WN++I A +AL L+ +M
Sbjct: 342 -SLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQR 400
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
+ P+ T I++C LGK IH VI+ + D FV ++L+D Y+K +++ A
Sbjct: 401 IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSAS 459
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQ 356
F++I ++++V+WN+++ G++ + L + + Y NE TF V+++ +
Sbjct: 460 TVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIG 519
Query: 357 LLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
L+ +H +I G ++ + +L+ YAK G ++ A A++ V +++I
Sbjct: 520 SLEKGKWVHHKLIISGLKDL-FTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMIN 578
Query: 413 --GIYNRTGQYNETV-KLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
G++ R G T +++ +P+ V + V++AC H+G +E F M++ + P
Sbjct: 579 AYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSP 638
Query: 470 DNYTFVSLLSACSKLCNL 487
++ F + S+ +L
Sbjct: 639 NSEHFACFIDLLSRSGDL 656
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 179/366 (48%), Gaps = 23/366 (6%)
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
AHL + ++ + LI YA SP S L+ E P+ F + +++ ++
Sbjct: 22 AHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPY---PDSFMYGVLIKCNVWC 78
Query: 356 QLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
LL L+ ++ + ++V S++ + A S V I V +I
Sbjct: 79 HLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVI 138
Query: 412 AG----IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
+Y +TG ++ K+ + D+V+W+ ++++C NG+ + L +FK M +
Sbjct: 139 ETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGV 198
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
PD T +S++ C++L L + S+HG I + ++ D +CN L+ MY KCG + SS
Sbjct: 199 EPDAVTMISVVEGCAELGCLRIARSVHGQITR-KMFDLDETLCNSLLTMYSKCGDLLSSE 257
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+IF ++ +N ++WTA+IS+ F+++AL F EM G +P+ V L +VL++C G
Sbjct: 258 RIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIG 317
Query: 588 LVREGMELFERMNRSYGVEPEMDHYH-----CVVDLLVRYGHLKEAEKIITTMPFPPNAL 642
L+REG + + V E+D + +V+L G L + E ++ + N +
Sbjct: 318 LIREGKSV-----HGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVS-DRNIV 371
Query: 643 IWRTFL 648
W + +
Sbjct: 372 AWNSLI 377
Score = 34.3 bits (77), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 12 IISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGAQLQASVLKNGL 70
+I+AY G + A+ F M+ G +P + F +LS C VE + +++K+
Sbjct: 576 MINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFG 635
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMP-RKSLVTWNSIVS 114
++ + L R G L E ++MP W S+V+
Sbjct: 636 VSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVN 680
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 275 bits (703), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 169/585 (28%), Positives = 287/585 (49%), Gaps = 45/585 (7%)
Query: 87 RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTES--SF 144
+ G + +F+ MP +++VTW ++ + ++ ++ LF ++ RS +F
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE--LLVANSLVNMYFQCAGIWSAEKMFKDV 202
++ G ++ Q+H +K GFD L V+N L+ Y + + A +F+++
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 203 EIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
+D V++NT+I + + +++ L+L+M P+ TF V+ + GL + LG+
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQ 270
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
+HA + D VG+ ++DFY+K D + + F E+ + VS+N +I Y+
Sbjct: 271 QLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQAD 330
Query: 323 S-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLG 377
S+ E+ +G+ F F+ +L + LQ LHC + ++ +V
Sbjct: 331 QYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGN 390
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
SL+ YAK + + E + L + V
Sbjct: 391 SLVDMYAKCEM--------------------------------FEEAELIFKSLPQRTTV 418
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SW +I+ G + L+LF MR + + D TF ++L A + +L LG LH I
Sbjct: 419 SWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFI 478
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRA 557
++ + + F + L+DMY KCGSI +V++F EM DRN ++W ALISA NG + A
Sbjct: 479 IRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAA 537
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
+ F +M G +PD V+++ VLTAC H G V +G E F+ M+ YG+ P+ HY C++D
Sbjct: 538 IGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLD 597
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAKYDTL 662
LL R G EAEK++ MPF P+ ++W + L CRI K +L
Sbjct: 598 LLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA---CRIHKNQSL 639
Score = 208 bits (530), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 155/589 (26%), Positives = 280/589 (47%), Gaps = 62/589 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRG--FEPTQFTFGGLLS-CDSLNPVE 57
MPDR VV++ ++ Y+R + ++A ++F M P TF LL C+ P
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 58 G-AQLQASVLKNGLFCADAF--VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
Q+ A +K G F + F V LL Y LD +FE++P K VT+N++++
Sbjct: 165 AVGQVHAFAVKLG-FDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLIT 223
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ K G + + LF ++ +S ++ +F GV+ + D G+Q+H L + GF
Sbjct: 224 GYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSR 283
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ V N +++ Y + + +F ++ D VS+N +I + ++++ + +L + M
Sbjct: 284 DASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQ 343
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
F +++ A L + +G+ +H + + + + VG++LVD YAKC+ E
Sbjct: 344 CMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFE 403
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A L F + + VSW ALI GY K + L ++ R ++ TF+ VL++S
Sbjct: 404 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASA 463
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+F L QLH IIR G N E V ++ SGL+
Sbjct: 464 SFASLLLGKQLHAFIIRSG--NLENV-------FSGSGLVD------------------- 495
Query: 410 IIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYP 469
+Y + G + V++ ++ + VSWN +I+A A NGD + + F M + + P
Sbjct: 496 ----MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Query: 470 DNYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGS 522
D+ + + +L+ACS + G S ++G+ K + + C ++D+ G+ G
Sbjct: 552 DSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKK-----HYAC--MLDLLGRNGR 604
Query: 523 IGSSVKIFNEMT-DRNVITWTALISALGLN---GFAQRALEKFREMEFL 567
+ K+ +EM + + I W+++++A ++ A+RA EK ME L
Sbjct: 605 FAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKL 653
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 221/480 (46%), Gaps = 44/480 (9%)
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM--SVDI 237
N++++ + + + SA +F + R VV+W ++G A + +F +A +L+ +M S
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 238 VFPNQTTFVYVINSC--AGLQNSILGKSIHAKVIKNALECDVF--VGSALVDFYAKCDNL 293
P+ TF ++ C A QN++ +HA +K + + F V + L+ Y + L
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAV--GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRL 200
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSS 352
+ A + F EI K+ V++N LI GY T SI L +++ Q G++P++FTFS VL++
Sbjct: 201 DLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV 260
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ +++ LG + AL+ T + R N I
Sbjct: 261 VGL----------------HDFALGQQL----------HALSVTTGFS--RDASVGNQIL 292
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
Y++ + ET L ++ D VS+N+VI++ + Y+ L F+ M+ N+
Sbjct: 293 DFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNF 352
Query: 473 TFVSLLSACSKLCNLALGSSLH--GLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
F ++LS + L +L +G LH L+ + I V N L+DMY KC + IF
Sbjct: 353 PFATMLSIAANLSSLQMGRQLHCQALLATADSI---LHVGNSLVDMYAKCEMFEEAELIF 409
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
+ R ++WTALIS G L+ F +M + D+ VL A +
Sbjct: 410 KSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL 469
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
G +L + RS +E +VD+ + G +K+A ++ MP NA+ W +
Sbjct: 470 LGKQLHAFIIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 527
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 4/222 (1%)
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
II+ G++ ++ + G +S A + V +I+G + +TG +
Sbjct: 39 IIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISG-HVKTGDVSS 97
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM--RAARIYPDNYTFVSLLSAC 481
L + +V+W I++ A N + E +LF+ M ++ PD+ TF +LL C
Sbjct: 98 ARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTF-VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVIT 540
+ +H K ++ V N+L+ Y + + + +F E+ +++ +T
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT 217
Query: 541 WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ LI+ +G ++ F +M G +P VL A
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
E+ +T N +I + K G + S+ +F+ M DR V+TWT L+ N A +
Sbjct: 73 EMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKL 132
Query: 561 FREM--EFLGFKPDRVALIAVLTAC 583
FR+M PD V +L C
Sbjct: 133 FRQMCRSSSCTLPDHVTFTTLLPGC 157
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 275 bits (703), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 189/659 (28%), Positives = 319/659 (48%), Gaps = 73/659 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
MP R+VV +N ++ AY G+ E+A+ + + G P + T LL+ S + + Q
Sbjct: 206 MPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLR-LLARISGDDSDAGQ 264
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+++ NG ++ SV E + R N +S + G
Sbjct: 265 VKS--FANG----------------------NDASSVSEIIFR------NKGLSEYLHSG 294
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ F ++V S+V + +F+ ++ L G+Q+H + +K G D L V+N
Sbjct: 295 QYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSN 354
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
SL+NMY + A +F ++ RD++SWN++I +A++ +A+ L++++ + P
Sbjct: 355 SLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKP 414
Query: 241 NQTTFVYVINSCAGLQNSI-LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
+Q T V+ + + L + L K +H IK D FV +AL+D Y++ ++ A +
Sbjct: 415 DQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEIL 474
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSHVLRS-SLAF-- 355
F E N ++V+WNA++ GY L L+ + G R ++FT + V ++ F
Sbjct: 475 F-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAI 533
Query: 356 -QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDA-LAFVTALNIPRAVVPANIIAG 413
Q Q+H I+ GY+ +V ++ Y K G +S A AF + +P
Sbjct: 534 NQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS--------IPV----- 580
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
PD V+W +I+ C NG+ + +F MR + PD +T
Sbjct: 581 --------------------PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT 620
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+L A S L L G +H K ++D FV L+DMY KCGSI + +F +
Sbjct: 621 IATLAKASSCLTALEQGRQIHANALKLN-CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRI 679
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
N+ W A++ L +G + L+ F++M+ LG KPD+V I VL+AC H GLV E
Sbjct: 680 EMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAY 739
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
+ M+ YG++PE++HY C+ D L R G +K+AE +I +M +A ++RT L C+
Sbjct: 740 KHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACR 798
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 137/602 (22%), Positives = 265/602 (44%), Gaps = 90/602 (14%)
Query: 1 MPDRNVVSFNSIISAYSRCGY-----VEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLN 54
MPDR++VS+NSI++AY++ ++ A +F + ++ T +L C
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLC---- 155
Query: 55 PVEGAQLQASVLKNGLFC-----ADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
+ + AS +G C D FV AL+ +Y + G + E +FE+MP + +V W
Sbjct: 156 -LHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLW 214
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
N ++ + + GF E+ + L S + E + + ++ D Q+
Sbjct: 215 NLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSD---AGQVKSFA-- 269
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
NG D A+S+ + F+ G+ S + L+
Sbjct: 270 NGND-----ASSVSEIIFRNKGL----------------------SEYLHSGQYSALLKC 302
Query: 230 YLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAK 289
+ M V +Q TF+ ++ + + + LG+ +H +K L+ + V ++L++ Y K
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHV 348
A F +S ++++SWN++I G A ++ L ++LL+ G +P+++T + V
Sbjct: 363 LRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSV 422
Query: 349 LR--SSLAFQL---LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
L+ SSL L Q+H I++ + +V +L+ +Y+++ + +A
Sbjct: 423 LKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA----------- 471
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
++L + D+V+WN ++A + D + L+LF M
Sbjct: 472 ----------------------EILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
D++T ++ C L + G +H K+ D +V + ++DMY KCG +
Sbjct: 510 KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG-YDLDLWVSSGILDMYVKCGDM 568
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR--VALIAVLT 581
++ F+ + + + WT +IS NG +RA F +M +G PD +A +A +
Sbjct: 569 SAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKAS 628
Query: 582 AC 583
+C
Sbjct: 629 SC 630
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 126/556 (22%), Positives = 231/556 (41%), Gaps = 52/556 (9%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
+ G + DL G+ H ++ + E + N+L++MY +C + A ++F +
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 204 IRDVVSWNTIIGALAES-----ENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
RD+VSWN+I+ A A+S EN +A L+ + D+V+ ++ T ++ C
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
+S H K L+ D FV ALV+ Y K ++ + F E+ +++V WN ++ Y
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 319 ASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLR-----------------------SSLA 354
+I L G PNE T + R S +
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEII 281
Query: 355 FQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR----------- 403
F+ L + Y ++ S + ++ L TA+ +
Sbjct: 282 FRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMA 341
Query: 404 -------AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVL 456
+ +N + +Y + ++ + + D++SWN VIA A NG E +
Sbjct: 342 LKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAV 401
Query: 457 ELFKYMRAARIYPDNYTFVSLLSACSKLCN-LALGSSLHGLIKKTEIISSDTFVCNMLID 515
LF + + PD YT S+L A S L L+L +H K + SD+FV LID
Sbjct: 402 CLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNV-SDSFVSTALID 460
Query: 516 MYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVA 575
Y + + + +F E + +++ W A+++ + + L+ F M G + D
Sbjct: 461 AYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFT 519
Query: 576 LIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTM 635
L V C + +G ++ +S G + ++ ++D+ V+ G + A+ ++
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 636 PFPPNALIWRTFLEGC 651
P P + + W T + GC
Sbjct: 579 PVPDD-VAWTTMISGC 593
>sp|Q9FNN9|PP370_ARATH Putative pentatricopeptide repeat-containing protein At5g08490
OS=Arabidopsis thaliana GN=PCMP-E32 PE=3 SV=1
Length = 849
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 185/672 (27%), Positives = 341/672 (50%), Gaps = 28/672 (4%)
Query: 1 MPDRNVVSFNSIISAYS-RCGYVEDALRMFLYM-INRGFEPTQFTFGGLLS-CDSL-NPV 56
M + V +N +++ S CG + +R F M +P+ TF +L C L +
Sbjct: 82 MDSLDPVVWNIVLTGLSVSCG--RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSY 139
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHG-CLDEVVSVFEDMPRKSLVTWNSIVSI 115
G + + ++K GL D VG AL+ +Y + G + + F+ + K +V+WN+I++
Sbjct: 140 NGKSMHSYIIKAGLE-KDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAG 198
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVI---HGLSNEQDLEFGEQIHGLVIKNGF 172
F ++ + D FC +++ ++ V+ + G QIH V++ +
Sbjct: 199 FSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSW 258
Query: 173 -DYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYL 231
+ V NSLV+ Y + I A +F + +D+VSWN +I A + + KA +L+
Sbjct: 259 LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFH 318
Query: 232 RM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA-LECDVFVGSALVDFYAK 289
+ V P+ T + ++ CA L + GK IH+ +++++ L D VG+AL+ FYA+
Sbjct: 319 NLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYAR 378
Query: 290 CDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP---NEFTFS 346
+ A+ FS +S K+I+SWNA++ +A SP L L L + T
Sbjct: 379 FGDTSAAYWAFSLMSTKDIISWNAILDAFAD--SPKQFQFLNLLHHLLNEAITLDSVTIL 436
Query: 347 HVLRSSLAFQ----LLQLHCLIIRMG--YENYEYVLG-SLMTSYAKSGLISDALAFVTAL 399
+L+ + Q + ++H ++ G ++ E LG +L+ +YAK G + A L
Sbjct: 437 SLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGL 496
Query: 400 NIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF 459
+ R +V N + Y +G +++ L +++ D+ +W++++ A + E + +F
Sbjct: 497 SERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVF 556
Query: 460 KYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGK 519
+ ++A + P+ T ++LL C++L +L L HG I + + D + L+D+Y K
Sbjct: 557 REIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL--GDIRLKGTLLDVYAK 614
Query: 520 CGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAV 579
CGS+ + +F R+++ +TA+++ ++G + AL + M KPD V + +
Sbjct: 615 CGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTM 674
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP 639
LTAC H GL+++G+++++ + +G++P M+ Y C VDL+ R G L +A +T MP P
Sbjct: 675 LTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEP 734
Query: 640 NALIWRTFLEGC 651
NA IW T L C
Sbjct: 735 NANIWGTLLRAC 746
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 202/414 (48%), Gaps = 37/414 (8%)
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
F+ V+ ++ DL G +HG V K G V+ S++NMY +C + +KMF+ ++
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMD 83
Query: 204 IRDVVSWNTIIGALA-----ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNS 258
D V WN ++ L+ E+ F KA+ D P+ TF V+ C L +S
Sbjct: 84 SLDPVVWNIVLTGLSVSCGRETMRFFKAMHF-----ADEPKPSSVTFAIVLPLCVRLGDS 138
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL-EGAHLCFSEISNKNIVSWNALILG 317
GKS+H+ +IK LE D VG+ALV YAK + A+ F I++K++VSWNA+I G
Sbjct: 139 YNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAG 198
Query: 318 YASKSSPTSIFL-LIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVL 376
++ + F +L+ PN T ++VL + + R G + + YV+
Sbjct: 199 FSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD----KNIACRSGRQIHSYVV 254
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
+S L + V N + Y R G+ E L +++ D+
Sbjct: 255 -------QRSWLQTH-------------VFVCNSLVSFYLRVGRIEEAASLFTRMGSKDL 294
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYM-RAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
VSWN+VIA A N ++ + +LF + + PD+ T +S+L C++L +LA G +H
Sbjct: 295 VSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHS 354
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALG 549
I + + DT V N LI Y + G ++ F+ M+ +++I+W A++ A
Sbjct: 355 YILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKI 529
D+ F+ ++ AC+ + +L G +LHG + K I+ V +++MY KC + K+
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSE-VSKSVLNMYAKCRRMDDCQKM 78
Query: 530 FNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG-FKPDRVALIAVLTACRHGGL 588
F +M + + W +++ L ++ + + F+ M F KP V VL C G
Sbjct: 79 FRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGD 137
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYG 623
G + + ++ G+E + + +V + ++G
Sbjct: 138 SYNGKSMHSYIIKA-GLEKDTLVGNALVSMYAKFG 171
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 191/656 (29%), Positives = 325/656 (49%), Gaps = 44/656 (6%)
Query: 10 NSIISAYSRCGYVEDALRMFLYMINRGFEPTQ-FTFGGLL-SCDSLNPVEGAQLQASVLK 67
+ +I + G + A+ M G P TF LL SC +L + L
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 68 NGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPR---KSLVTWNSIVSIFGKHGFVED 124
D+ + +L+ LY + G + VFE M R + +V+W+++++ +G +G D
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 125 CMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNG-FDYELLVANSLV 183
+ +F E + + + + VI SN + G G ++K G F+ ++ V SL+
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 184 NMYFQCAGIW-SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQ 242
+M+ + + +A K+F + +VV+W +I + +A+ +L M + ++
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 243 TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD---NLEGAHLC 299
T V ++CA L+N LGK +H+ I++ L DV +LVD YAKC +++
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKV 327
Query: 300 FSEISNKNIVSWNALILGYASKS--SPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQ 356
F + + +++SW ALI GY + +I L E++ G+ PN FTFS ++
Sbjct: 328 FDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLS 387
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
R+G + VLG K GL S++ AN + ++
Sbjct: 388 -------DPRVGKQ----VLGQAF----KRGLASNSSV-------------ANSVISMFV 419
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
++ + + + L ++VS+N + N ++++ +L + + +TF S
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFAS 479
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
LLS + + ++ G +H + K + S + VCN LI MY KCGSI ++ ++FN M +R
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVVKLGL-SCNQPVCNALISMYSKCGSIDTASRVFNFMENR 538
Query: 537 NVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELF 596
NVI+WT++I+ +GFA R LE F +M G KP+ V +A+L+AC H GLV EG F
Sbjct: 539 NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHF 598
Query: 597 ERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M + ++P+M+HY C+VDLL R G L +A + I TMPF + L+WRTFL C+
Sbjct: 599 NSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACR 654
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 141/615 (22%), Positives = 278/615 (45%), Gaps = 59/615 (9%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQLQ 62
R+VVS++++++ Y G DA+++F+ + G P + + ++ +C + + V ++
Sbjct: 129 RDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVT 188
Query: 63 ASVL-KNGLFCADAFVGTALLGLYGR-HGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L K G F +D VG +L+ ++ + + VF+ M ++VTW +++ + G
Sbjct: 189 LGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMG 248
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
F + + F ++V S + + V + ++L G+Q+H I++G + V
Sbjct: 249 FPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VEC 306
Query: 181 SLVNMYFQCAGIWSAE---KMFKDVEIRDVVSWNTIIGALAESENFG-KALELYLRM-SV 235
SLV+MY +C+ S + K+F +E V+SW +I ++ N +A+ L+ M +
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQ 366
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V PN TF +C L + +GK + + K L + V ++++ + K D +E
Sbjct: 367 GHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMED 426
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSSLA 354
A F +S KN+VS+N + G + F LL E+ + + FTF+ +L
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVAN 486
Query: 355 FQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ Q+H ++++G + V +L++ Y+K G I A
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA------------------ 528
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
++ + +E +++SW +I A +G VLE F M + P+
Sbjct: 529 --------------SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 471 NYTFVSLLSACSKLCNLALG-SSLHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVK 528
T+V++LSACS + ++ G + + + +I + + C ++D+ + G + + +
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYAC--MVDLLCRAGLLTDAFE 632
Query: 529 IFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT---ACR 584
N M +V+ W + A ++ + L K + L P+ A L+ AC
Sbjct: 633 FINTMPFQADVLVWRTFLGACRVH--SNTELGKLAARKILELDPNEPAAYIQLSNIYAC- 689
Query: 585 HGGLVREGMELFERM 599
G E E+ +M
Sbjct: 690 -AGKWEESTEMRRKM 703
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 240/483 (49%), Gaps = 27/483 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
M + NVV++ +I+ + G+ +A+R FL M+ GFE +FT + S C L + G
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGR---HGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
QL + +++GL V +L+ +Y + G +D+ VF+ M S+++W ++++
Sbjct: 289 KQLHSWAIRSGLV---DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITG 345
Query: 116 FGKH-GFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
+ K+ + + LF E++ + V +F N D G+Q+ G K G
Sbjct: 346 YMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLA 405
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
VANS+++M+ + + A++ F+ + +++VS+NT + + NF +A +L +
Sbjct: 406 SNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI 465
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ + + TF +++ A + + G+ IH++V+K L C+ V +AL+ Y+KC ++
Sbjct: 466 TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSI 525
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRSS 352
+ A F+ + N+N++SW ++I G+A + ++++ G +PNE T+ +L +
Sbjct: 526 DTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSAC 585
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-------KSGLISDALAFVTALNIPRAV 405
L+ YE+++ + M YA ++GL++DA F+ + V
Sbjct: 586 SHVGLVSEGWRHFNSMYEDHK--IKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADV 643
Query: 406 VPANIIAG---IYNRTGQYNETVKLLSQLERPDIVSWNIV--IAACAHNGDYKEVLELFK 460
+ G +++ T + + +L+ + ++ + I ACA G ++E E+ +
Sbjct: 644 LVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA--GKWEESTEMRR 701
Query: 461 YMR 463
M+
Sbjct: 702 KMK 704
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/571 (29%), Positives = 292/571 (51%), Gaps = 50/571 (8%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQD 156
+F+ MP ++++++NS++S + + GF E M LF E + + L + ++ G + D
Sbjct: 104 LFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCD 163
Query: 157 LEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGA 216
L+ GE +HGLV+ NG ++ + N L++MY +C + A +F + RD VSWN++I
Sbjct: 164 LDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISG 223
Query: 217 LAESENFGKALELYLRMSVDIVFPNQTTFVY--VINSCA-GLQNSIL--GKSIHAKVIKN 271
+ L L +M D + N TT+ V+ +C L + G +IH K
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGL--NLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL 281
Query: 272 ALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY------ASKSSPT 325
+E D+ V +AL+D YAK +L+ A FS + +KN+V++NA+I G+ ++S
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSE 341
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMT 381
+ L +++ + G P+ TFS VL++ A + L Q+H LI + +++ E++ +L+
Sbjct: 342 AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 401
Query: 382 SYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNI 441
YA G D + + + + DI SW
Sbjct: 402 LYALMGSTEDGM--------------------------------QCFASTSKQDIASWTS 429
Query: 442 VIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
+I N + +LF+ + ++ I P+ YT ++SAC+ L+ G + G K+
Sbjct: 430 MIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSG 489
Query: 502 IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKF 561
I + T V I MY K G++ + ++F E+ + +V T++A+IS+L +G A AL F
Sbjct: 490 -IDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIF 548
Query: 562 REMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVR 621
M+ G KP++ A + VL AC HGGLV +G++ F+ M Y + P H+ C+VDLL R
Sbjct: 549 ESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGR 608
Query: 622 YGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
G L +AE +I + F + + WR L C+
Sbjct: 609 TGRLSDAENLILSSGFQDHPVTWRALLSSCR 639
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 163/629 (25%), Positives = 297/629 (47%), Gaps = 61/629 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-G 58
MP+RN++SFNS+IS Y++ G+ E A+ +FL + +FT+ G L C ++ G
Sbjct: 108 MPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG 167
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L V+ NGL F+ L+ +Y + G LD+ +S+F+ + V+WNS++S + +
Sbjct: 168 ELLHGLVVVNGL-SQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVR 226
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLS---NEQDLEFGEQIHGLVIKNGFDYE 175
G E+ + L ++ R + LT + V+ NE +E G IH K G +++
Sbjct: 227 VGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFD 286
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE-----SENFGKALELY 230
++V +L++MY + + A K+F + ++VV++N +I + E +A +L+
Sbjct: 287 IVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLF 346
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
+ M + P+ +TF V+ +C+ + G+ IHA + KN + D F+GSAL++ YA
Sbjct: 347 MDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALM 406
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVL 349
+ E CF+ S ++I SW ++I + S F L +L RP E+T S ++
Sbjct: 407 GSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMM 466
Query: 350 RSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
+ F L Q+ I+ G + + V S ++ YAKSG N+P A
Sbjct: 467 SACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSG------------NMPLA- 513
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
++ +++ PD+ +++ +I++ A +G E L +F+ M+
Sbjct: 514 -------------------NQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTH 554
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT--FVCNMLIDMYGKCGSI 523
I P+ F+ +L AC + G +K I+ + F C L+D+ G+ G +
Sbjct: 555 GIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTC--LVDLLGRTGRL 612
Query: 524 GSSVK-IFNEMTDRNVITWTALISALGL---NGFAQRALEKFREMEFLGFKPDRVALIAV 579
+ I + + +TW AL+S+ + + +R E+ E+E P+ +
Sbjct: 613 SDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELE-----PEASGSYVL 667
Query: 580 LTACRHGGLVREGMELFERMNRSYGVEPE 608
L + V E + R GV+ E
Sbjct: 668 LHNIYNDSGVNSSAEEVRELMRDRGVKKE 696
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/498 (23%), Positives = 222/498 (44%), Gaps = 51/498 (10%)
Query: 159 FGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
G+ HG +IK+ + L + N+L+NMY +C + A ++F + R+++S+N++I
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 219 ESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ + +A+EL+L + ++ T+ + C + LG+ +H V+ N L VF
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVF 184
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY 338
+ + L+D Y+KC L+ A F ++ VSWN+LI GY
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGY-------------------- 224
Query: 339 RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA---KSGLISDALA- 394
+R A + L L + R G Y LGS++ + G I +A
Sbjct: 225 ----------VRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI 274
Query: 395 --FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
+ L + +V + +Y + G E +KL S + ++V++N +I+ +
Sbjct: 275 HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEI 334
Query: 453 -----KEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
E +LF M+ + P TF +L ACS L G +H LI K SD
Sbjct: 335 TDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNN-FQSDE 393
Query: 508 FVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFL 567
F+ + LI++Y GS ++ F + +++ +WT++I N + A + FR++
Sbjct: 394 FIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSS 453
Query: 568 GFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV----VDLLVRYG 623
+P+ + +++AC + G ++ + Y ++ +D + V + + + G
Sbjct: 454 HIRPEEYTVSLMMSACADFAALSSGEQI-----QGYAIKSGIDAFTSVKTSSISMYAKSG 508
Query: 624 HLKEAEKIITTMPFPPNA 641
++ A ++ + P A
Sbjct: 509 NMPLANQVFIEVQNPDVA 526
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 155/353 (43%), Gaps = 52/353 (14%)
Query: 259 ILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGY 318
+LGK H +IK++L +++ + L++ Y KC L A F + +NI+S+N+LI GY
Sbjct: 64 VLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGY 123
Query: 319 ASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGY--ENYEYV 375
++ L +E + + ++FT++ L G+ E +
Sbjct: 124 TQMGFYEQAMELFLEAREANLKLDKFTYAGAL------------------GFCGERCDLD 165
Query: 376 LGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPD 435
LG L+ V + + V N++ +Y++ G+ ++ + L + + D
Sbjct: 166 LGELLH------------GLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERD 213
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCN---LALGSS 492
VSWN +I+ G +E L L M + Y S+L AC N + G +
Sbjct: 214 QVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMA 273
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
+H K + D V L+DMY K GS+ ++K+F+ M +NV+T+ A+IS G
Sbjct: 274 IHCYTAKLG-MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMIS-----G 327
Query: 553 FAQ----------RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
F Q A + F +M+ G +P VL AC + G ++
Sbjct: 328 FLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein At2g39620
OS=Arabidopsis thaliana GN=PCMP-E33 PE=3 SV=1
Length = 836
Score = 271 bits (693), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 192/685 (28%), Positives = 340/685 (49%), Gaps = 57/685 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVEGAQ 60
M ++VV++N+++S ++ G AL +F M + + + L+ +++ +E +
Sbjct: 161 MHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIP--AVSKLEKSD 218
Query: 61 ----LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIF 116
L V+K G A + L+ +Y L SVFE++ RK +W ++++ +
Sbjct: 219 VCRCLHGLVIKKGFIFA---FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAY 275
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
+GF E+ + LF + +V + + + + + DL G IH ++ G ++
Sbjct: 276 AHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDV 335
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VA SL++MY +C + AE++F ++E RDVVSW+ +I + ++ +A+ L+ M
Sbjct: 336 SVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRI 395
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ PN T V+ CAG+ S LGKSIH IK +E ++ +A++ YAKC A
Sbjct: 396 HIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPA 455
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRS-SLA 354
F + K+ V++NAL GY F + + ++L G P+ T +L++ +
Sbjct: 456 LKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFC 515
Query: 355 FQLLQLHCL---IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ C+ II+ G+++ +V +L+ + K DALA L
Sbjct: 516 SDYARGSCVYGQIIKHGFDSECHVAHALINMFTK----CDALAAAIVL------------ 559
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+++ G TV SWNI++ +G +E + F+ M+ + P+
Sbjct: 560 ---FDKCGFEKSTV------------SWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNA 604
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TFV+++ A ++L L +G S+H + + S T V N L+DMY KCG I SS K F
Sbjct: 605 VTFVNIVRAAAELSALRVGMSVHSSLIQCG-FCSQTPVGNSLVDMYAKCGMIESSEKCFI 663
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
E++++ +++W ++SA +G A A+ F M+ KPD V+ ++VL+ACRH GLV E
Sbjct: 664 EISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEE 723
Query: 592 GMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
G +FE M + +E E++HY C+VDLL + G EA +++ M + +W L
Sbjct: 724 GKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSS 783
Query: 652 QR-----------CRIAKYDTLNST 665
+ C++ K + LN +
Sbjct: 784 RMHCNLWLSNAALCQLVKLEPLNPS 808
Score = 233 bits (593), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 169/637 (26%), Positives = 318/637 (49%), Gaps = 46/637 (7%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFG-GLLSC-DSLNPVEGA 59
D VV +NS+I Y+R G +AL F YM +G +P +++F L +C S++ +G
Sbjct: 61 DPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGL 120
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
++ + + GL +D ++GTAL+ +Y + L VF+ M K +VTWN++VS ++
Sbjct: 121 RIHDLIAEMGLE-SDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQN 179
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
G + LF ++ V + S +I +S + + +HGLVIK GF + +
Sbjct: 180 GCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAF--S 237
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
+ L++MY CA +++AE +F++V +D SW T++ A A + F + LEL+ M V
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVR 297
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
N+ + + A + + + G +IH ++ L DV V ++L+ Y+KC LE A
Sbjct: 298 MNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQL 357
Query: 300 FSEISNKNIVSWNALILGY-ASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F I ++++VSW+A+I Y + +I L +++++ +PN T + VL+
Sbjct: 358 FINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAAS 417
Query: 359 QL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+L HC I+ E+ ++++ YAK G S AL
Sbjct: 418 RLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPAL--------------------- 456
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
K +L D V++N + GD + +++K M+ + PD+ T
Sbjct: 457 -----------KAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTM 505
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
V +L C+ + A GS ++G I K S+ V + LI+M+ KC ++ +++ +F++
Sbjct: 506 VGMLQTCAFCSDYARGSCVYGQIIKHG-FDSECHVAHALINMFTKCDALAAAIVLFDKCG 564
Query: 535 -DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
+++ ++W +++ L+G A+ A+ FR+M+ F+P+ V + ++ A +R GM
Sbjct: 565 FEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGM 624
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEK 630
+ + + G + + +VD+ + G ++ +EK
Sbjct: 625 SVHSSLIQC-GFCSQTPVGNSLVDMYAKCGMIESSEK 660
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/556 (22%), Positives = 244/556 (43%), Gaps = 34/556 (6%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQ 155
+F+ + +V WNS++ + + G + + F + + + + SF + +
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
D + G +IH L+ + G + ++ + +LV MY + + SA ++F + ++DVV+WNT++
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
LA++ AL L+ M V + + +I + + L+ S + + +H VIK
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF-- 232
Query: 276 DVFV-GSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
+F S L+D Y C +L A F E+ K+ SW ++ YA + L +L+
Sbjct: 233 -IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLM 291
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALA 394
R + + V +S + L+ + +Y + GLI D
Sbjct: 292 ----RNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYA----------VQQGLIGD--- 334
Query: 395 FVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKE 454
V A + +Y++ G+ +L +E D+VSW+ +IA+ G + E
Sbjct: 335 ----------VSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDE 384
Query: 455 VLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLI 514
+ LF+ M I P+ T S+L C+ + LG S+H K + I S+ +I
Sbjct: 385 AISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD-IESELETATAVI 443
Query: 515 DMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRV 574
MY KCG ++K F + ++ + + AL G A +A + ++ M+ G PD
Sbjct: 444 SMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSR 503
Query: 575 ALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITT 634
++ +L C G ++ ++ + +G + E H ++++ + L A +
Sbjct: 504 TMVGMLQTCAFCSDYARGSCVYGQIIK-HGFDSECHVAHALINMFTKCDALAAAIVLFDK 562
Query: 635 MPFPPNALIWRTFLEG 650
F + + W + G
Sbjct: 563 CGFEKSTVSWNIMMNG 578
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 222/493 (45%), Gaps = 43/493 (8%)
Query: 162 QIHGLVIKNGFDYELLVANSLVNMY--FQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAE 219
Q+HG +I +G L N L+N Y FQ + + +F V VV WN++I
Sbjct: 23 QVHGSLIVSG----LKPHNQLINAYSLFQRQDL--SRVIFDSVRDPGVVLWNSMIRGYTR 76
Query: 220 SENFGKALELYLRMSVDI-VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVF 278
+ +AL + MS + + P++ +F + + +CAG + G IH + + LE DV+
Sbjct: 77 AGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVY 136
Query: 279 VGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGY 338
+G+ALV+ Y K +L A F ++ K++V+WN ++ G A ++ LL
Sbjct: 137 IGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLF------- 189
Query: 339 RPNEFTFSHVLRS-SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVT 397
H +RS + + L+ LI + V L K G I AF +
Sbjct: 190 --------HDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI---FAFSS 238
Query: 398 ALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLE 457
L +Y + ++ R D SW ++AA AHNG ++EVLE
Sbjct: 239 GL------------IDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLE 286
Query: 458 LFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMY 517
LF MR + + S L A + + +L G ++H + +I D V L+ MY
Sbjct: 287 LFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLI-GDVSVATSLMSMY 345
Query: 518 GKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALI 577
KCG + + ++F + DR+V++W+A+I++ G A+ FR+M + KP+ V L
Sbjct: 346 SKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLT 405
Query: 578 AVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPF 637
+VL C R G + ++ +E E++ V+ + + G A K +P
Sbjct: 406 SVLQGCAGVAASRLGKSIHCYAIKA-DIESELETATAVISMYAKCGRFSPALKAFERLPI 464
Query: 638 PPNALIWRTFLEG 650
+A+ + +G
Sbjct: 465 -KDAVAFNALAQG 476
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 271 bits (692), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/566 (28%), Positives = 292/566 (51%), Gaps = 38/566 (6%)
Query: 91 LDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG 150
+++ + +F++M + WN ++ F G + + + +V + V ++ VI
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
++ LE G++IH +VIK GF ++ V NSL+++Y + W AEK+F+++ RD+VSW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 211 NTII-GALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
N++I G LA + F +L L+ M P++ + + + +C+ + + +GK IH +
Sbjct: 200 NSMISGYLALGDGFS-SLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 270 KNALEC-DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIF 328
++ +E DV V ++++D Y+K + A F+ + +NIV+WN +I YA T F
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 329 LLIELL--QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKS 386
L + + Q G +P+ T ++L +S + +H +R G+
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGF----------------- 361
Query: 387 GLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC 446
+P V+ +I +Y GQ + ++ +++SWN +IAA
Sbjct: 362 --------------LPHMVLETALI-DMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAY 406
Query: 447 AHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSD 506
NG LELF+ + + + PD+ T S+L A ++ +L+ G +H I K+ S +
Sbjct: 407 VQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWS-N 465
Query: 507 TFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEF 566
T + N L+ MY CG + + K FN + ++V++W ++I A ++GF + ++ F EM
Sbjct: 466 TIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIA 525
Query: 567 LGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
P++ ++L AC G+V EG E FE M R YG++P ++HY C++DL+ R G+
Sbjct: 526 SRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFS 585
Query: 627 EAEKIITTMPFPPNALIWRTFLEGCQ 652
A++ + MPF P A IW + L +
Sbjct: 586 AAKRFLEEMPFVPTARIWGSLLNASR 611
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 201/377 (53%), Gaps = 16/377 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQF-TFGGLLSCDSL-NPVEG 58
MP+R++VS+NS+IS Y G +L +F M+ GF+P +F T L +C + +P G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ +++ + D V T++L +Y ++G + +F M ++++V WN ++ + +
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G V D F ++ SE + + I+ L LE G IHG ++ GF +++
Sbjct: 311 NGRVTDAFLCFQKM--SEQNGLQPDVITSINLLPASAILE-GRTIHGYAMRRGFLPHMVL 367
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+L++MY +C + SAE +F + ++V+SWN+II A ++ ALEL+ + +
Sbjct: 368 ETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSL 427
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ TT ++ + A + G+ IHA ++K+ + + ++LV YA C +LE A
Sbjct: 428 VPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARK 487
Query: 299 CFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQL 357
CF+ I K++VSWN++I+ YA S++L E++ PN+ TF+ +L +
Sbjct: 488 CFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAA------ 541
Query: 358 LQLHCLIIRMGYENYEY 374
C I M E +EY
Sbjct: 542 ----CSISGMVDEGWEY 554
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 259/534 (48%), Gaps = 46/534 (8%)
Query: 9 FNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-GAQLQASVL 66
+N +I ++ CG +A++ + M+ G + FT+ ++ S ++ +E G ++ A V+
Sbjct: 98 WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVI 157
Query: 67 KNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCM 126
K G F +D +V +L+ LY + GC + VFE+MP + +V+WNS++S + G +
Sbjct: 158 KLG-FVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSL 216
Query: 127 FLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY-ELLVANSLVNM 185
LF E+++ S + + S+ + G++IH +++ + +++V S+++M
Sbjct: 217 MLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDM 276
Query: 186 YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS-VDIVFPNQTT 244
Y + + AE++F + R++V+WN +IG A + A + +MS + + P+ T
Sbjct: 277 YSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVIT 336
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
+ ++ + A L+ G++IH ++ + + +AL+D Y +C L+ A + F ++
Sbjct: 337 SINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA 392
Query: 305 NKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLRS---SLAF-QLLQ 359
KN++SWN++I Y S L EL P+ T + +L + SL+ + +
Sbjct: 393 EKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGRE 452
Query: 360 LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
+H I++ Y + +L SL+ YA G + DA
Sbjct: 453 IHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDAR-------------------------- 486
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLS 479
K + + D+VSWN +I A A +G + + LF M A+R+ P+ TF SLL+
Sbjct: 487 ------KCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLA 540
Query: 480 ACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
ACS + G +K+ I ++D+ G+ G+ ++ + EM
Sbjct: 541 ACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 270 bits (691), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 176/598 (29%), Positives = 288/598 (48%), Gaps = 41/598 (6%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q + NGL D + T L+ LYG G + VF+ +P W ++ + +
Sbjct: 62 QSHGVLTGNGLM-GDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ + L+ L++ + F + + QDL+ G++IH ++K ++ +V
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVL 179
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
L++MY +C I SA K+F D+ +R+VV W ++I +++ + L L+ RM + V
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
N+ T+ +I +C L GK H ++K+ +E + ++L+D Y KC ++ A
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVLRSSLAFQLL 358
F+E S+ ++V W A+I+GY S L + ++ + +PN T + VL + L
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENL 359
Query: 359 QL----HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
+L H L I++G + N+ AN + +
Sbjct: 360 ELGRSVHGLSIKVG---------------------------IWDTNV------ANALVHM 386
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y + Q + + DIV+WN +I+ + NG E L LF M + + P+ T
Sbjct: 387 YAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTV 446
Query: 475 VSLLSACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
SL SAC+ L +LA+GSSLH +K + SS V L+D Y KCG S+ IF+ +
Sbjct: 447 ASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTI 506
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
++N ITW+A+I G G +LE F EM KP+ ++L+AC H G+V EG
Sbjct: 507 EEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGK 566
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+ F M + Y P HY C+VD+L R G L++A II MP P+ + FL GC
Sbjct: 567 KYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGC 624
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 240/474 (50%), Gaps = 17/474 (3%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGL-LSCDSLNPV-EGAQL 61
RNVV + S+I+ Y + E+ L +F M ++T+G L ++C L+ + +G
Sbjct: 205 RNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWF 264
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
++K+G+ + V T+LL +Y + G + VF + LV W +++ + +G
Sbjct: 265 HGCLVKSGIELSSCLV-TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGS 323
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANS 181
V + + LF ++ E+ + V+ G ++LE G +HGL IK G ++ VAN+
Sbjct: 324 VNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANA 382
Query: 182 LVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPN 241
LV+MY +C A+ +F+ +D+V+WN+II +++ + +AL L+ RM+ + V PN
Sbjct: 383 LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPN 442
Query: 242 QTTFVYVINSCAGLQNSILGKSIHAKVIKNAL--ECDVFVGSALVDFYAKCDNLEGAHLC 299
T + ++CA L + +G S+HA +K V VG+AL+DFYAKC + + A L
Sbjct: 443 GVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLI 502
Query: 300 FSEISNKNIVSWNALILGYASKSSPT-SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F I KN ++W+A+I GY + S+ L E+L+ +PNE TF+ +L + ++
Sbjct: 503 FDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMV 562
Query: 359 QLHCLIIRMGYENYEYVLGS-----LMTSYAKSGLISDALAFVTALNIPRAVVPANII-- 411
Y++Y + + ++ A++G + AL + + I V
Sbjct: 563 NEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLH 622
Query: 412 -AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAAC-AHNGDYKEVLELFKYMR 463
G+++R +K + L PD S+ ++++ A +G + + E+ M+
Sbjct: 623 GCGMHSRFDLGEIVIKKMLDL-HPDDASYYVLVSNLYASDGRWNQAKEVRNLMK 675
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 229/517 (44%), Gaps = 40/517 (7%)
Query: 24 DALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-GAQLQASVLKNGLFCADAFVGTAL 81
+ ++++ ++ GF F L +C L ++ G ++ ++K F D V T L
Sbjct: 125 EVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSF--DNVVLTGL 182
Query: 82 LGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTE 141
L +Y + G + VF D+ +++V W S+++ + K+ E+ + LF + + V E
Sbjct: 183 LDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNE 242
Query: 142 SSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKD 201
++ +I + L G+ HG ++K+G + + SL++MY +C I +A ++F +
Sbjct: 243 YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE 302
Query: 202 VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILG 261
D+V W +I + + +AL L+ +M + PN T V++ C ++N LG
Sbjct: 303 HSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELG 362
Query: 262 KSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK 321
+S+H IK + D V +ALV YAKC A F S K+IV+WN++I G++
Sbjct: 363 RSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQN 421
Query: 322 SS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVL 376
S ++FL + PN T + + + + L LH +++G+
Sbjct: 422 GSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGF------- 474
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDI 436
L S ++ TAL Y + G + +E +
Sbjct: 475 -----------LASSSVHVGTAL------------LDFYAKCGDPQSARLIFDTIEEKNT 511
Query: 437 VSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGL 496
++W+ +I GD LELF+ M + P+ TF S+LSAC + G
Sbjct: 512 ITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSS 571
Query: 497 IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+ K + T ++DM + G + ++ I +M
Sbjct: 572 MYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKM 608
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/506 (24%), Positives = 215/506 (42%), Gaps = 42/506 (8%)
Query: 151 LSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSW 210
LS +++ Q HG++ NG ++ +A LV++Y A +F + D W
Sbjct: 51 LSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLW 110
Query: 211 NTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIK 270
++ ++ + ++LY + + F + +C LQ+ GK IH +++K
Sbjct: 111 KVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK 170
Query: 271 NALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFL 329
D V + L+D YAKC ++ AH F++I+ +N+V W ++I GY + L
Sbjct: 171 -VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVL 229
Query: 330 LIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAK 385
+ + NE+T+ ++ + L H +++ G E ++ SL+ Y K
Sbjct: 230 FNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVK 289
Query: 386 SGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAA 445
G IS+A ++ ++ D+V W +I
Sbjct: 290 CGDISNAR--------------------------------RVFNEHSHVDLVMWTAMIVG 317
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
HNG E L LF+ M+ I P+ T S+LS C + NL LG S+HGL K I
Sbjct: 318 YTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-- 375
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
DT V N L+ MY KC + +F ++++++ W ++IS NG AL F M
Sbjct: 376 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFE-RMNRSYGVEPEMDHYHCVVDLLVRYGH 624
P+ V + ++ +AC G + G L + + + ++D + G
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 625 LKEAEKIITTMPFPPNALIWRTFLEG 650
+ A I T+ N + W + G
Sbjct: 496 PQSARLIFDTIE-EKNTITWSAMIGG 520
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 81/149 (54%), Gaps = 3/149 (2%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQ 60
++++V++NSIIS +S+ G + +AL +F M + P T L S C SL + G+
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSS 464
Query: 61 LQASVLKNGLFCADA-FVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
L A +K G + + VGTALL Y + G +F+ + K+ +TW++++ +GK
Sbjct: 465 LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQ 524
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVI 148
G + LF E+++ + ES+F ++
Sbjct: 525 GDTIGSLELFEEMLKKQQKPNESTFTSIL 553
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 186/612 (30%), Positives = 297/612 (48%), Gaps = 43/612 (7%)
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
AQ A ++ +G F D + T L G + +F + R + +N ++ F
Sbjct: 37 AQTHAQIILHG-FRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSV 95
Query: 119 HGFVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + +F L +S ++ S++ I S +D G IHG + +G D ELL
Sbjct: 96 NESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELL 155
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVD 236
+ +++V MYF+ + A K+F + +D + WNT+I ++E + ++++++ + +
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ TT + ++ + A LQ LG IH+ K +V + + Y+KC ++
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMG 275
Query: 297 HLCFSEISNKNIVSWNALILGYASK-SSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F E +IV++NA+I GY S + S+ L EL+ G R LRSS
Sbjct: 276 SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR---------LRSSTLV 326
Query: 356 QLLQL--HCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L+ + H ++I Y + Y L S S+A +S AL V
Sbjct: 327 SLVPVSGHLMLI---YAIHGYCLKSNFLSHAS---VSTALTTV----------------- 363
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
Y++ + KL + + SWN +I+ NG ++ + LF+ M+ + P+ T
Sbjct: 364 -YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+LSAC++L L+LG +H L++ T+ SS +V LI MY KCGSI + ++F+ M
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESS-IYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
T +N +TW +IS GL+G Q AL F EM G P V + VL AC H GLV+EG
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD 541
Query: 594 ELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQR 653
E+F M YG EP + HY C+VD+L R GHL+ A + I M P + +W T L
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGA--- 598
Query: 654 CRIAKYDTLNST 665
CRI K L T
Sbjct: 599 CRIHKDTNLART 610
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 221/467 (47%), Gaps = 26/467 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPVE--- 57
MP+++ + +N++IS Y + +++++F +IN T+ LL D L V
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESC--TRLDTTTLL--DILPAVAELQ 235
Query: 58 ----GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
G Q+ + K G + D +V T + LY + G + ++F + + +V +N+++
Sbjct: 236 ELRLGMQIHSLATKTGCYSHD-YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMI 294
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
+ +G E + LF EL+ S L S+ V ++ +S L + IHG +K+ F
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV-PVSGHLMLIYA--IHGYCLKSNFL 351
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
V+ +L +Y + I SA K+F + + + SWN +I ++ A+ L+ M
Sbjct: 352 SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
PN T ++++CA L LGK +H V E ++V +AL+ YAKC ++
Sbjct: 412 QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 294 EGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A F ++ KN V+WN +I GY ++ + E+L G P TF VL +
Sbjct: 472 AEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYAC 531
Query: 353 LAFQLLQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNI-PRAVV 406
L++ + +I R G+E ++ ++G + AL F+ A++I P + V
Sbjct: 532 SHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSV 591
Query: 407 PANIIAG--IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGD 451
++ I+ T + L +L+ PD V ++++++ H+ D
Sbjct: 592 WETLLGACRIHKDTNLARTVSEKLFELD-PDNVGYHVLLSNI-HSAD 636
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 270 bits (689), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/523 (28%), Positives = 264/523 (50%), Gaps = 44/523 (8%)
Query: 140 TESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMF 199
++S + +I +++ L+ QIH ++ G + + L++ I A ++F
Sbjct: 20 SDSFYASLIDSATHKAQLK---QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76
Query: 200 KDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSI 259
D+ + WN II + + +F AL +Y M + V P+ TF +++ +C+GL +
Sbjct: 77 DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 260 LGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFS--EISNKNIVSWNALILG 317
+G+ +HA+V + + DVFV + L+ YAKC L A F + + IVSW A++
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 318 YASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQ----LHCLIIRMGYENY 372
YA P ++ + ++ ++ +P+ VL + Q L+ +H +++MG E
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
+L SL T YAK G ++ A L +++
Sbjct: 257 PDLLISLNTMYAKCGQVATAKI--------------------------------LFDKMK 284
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSS 492
P+++ WN +I+ A NG +E +++F M + PD + S +SAC+++ +L S
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344
Query: 493 LHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNG 552
++ + +++ D F+ + LIDM+ KCGS+ + +F+ DR+V+ W+A+I GL+G
Sbjct: 345 MYEYVGRSDY-RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 553 FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHY 612
A+ A+ +R ME G P+ V + +L AC H G+VREG F RM + + P+ HY
Sbjct: 404 RAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHY 462
Query: 613 HCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
CV+DLL R GHL +A ++I MP P +W L C++ R
Sbjct: 463 ACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 505
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 191/350 (54%), Gaps = 6/350 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVE-G 58
+P + +N+II YSR + +DAL M+ M P FTF LL +C L+ ++ G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE--DMPRKSLVTWNSIVSIF 116
+ A V + G F AD FV L+ LY + L +VFE +P +++V+W +IVS +
Sbjct: 139 RFVHAQVFRLG-FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAY 197
Query: 117 GKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++G + + +F ++ + +V + V V++ + QDL+ G IH V+K G + E
Sbjct: 198 AQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP 257
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+ SL MY +C + +A+ +F ++ +++ WN +I A++ +A++++ M
Sbjct: 258 DLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK 317
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V P+ + I++CA + + +S++ V ++ DVF+ SAL+D +AKC ++EGA
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 297 HLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTF 345
L F ++++V W+A+I+GY + +I L + + G PN+ TF
Sbjct: 378 RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTF 427
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 235/497 (47%), Gaps = 44/497 (8%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKH 119
Q+ A +L GL + F+ T L+ G + VF+D+PR + WN+I+ + ++
Sbjct: 39 QIHARLLVLGLQFS-GFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 120 GFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+D + ++ + + V+ +F ++ S L+ G +H V + GFD ++ V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEI--RDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
N L+ +Y +C + SA +F+ + + R +VSW I+ A A++ +ALE++ +M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V P+ V V+N+ LQ+ G+SIHA V+K LE + + +L YAKC + A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF- 355
+ F ++ + N++ WNA+I GYA + +I + E++ RP+ + + + +
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 356 ---QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
Q ++ + R Y + ++ +L+ +AK G + A
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL------------------ 379
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+++RT L+R D+V W+ +I +G +E + L++ M ++P++
Sbjct: 380 -VFDRT------------LDR-DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEI-ISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
TF+ LL AC+ + G + +I + C +ID+ G+ G + + ++
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYAC--VIDLLGRAGHLDQAYEVIK 483
Query: 532 EM-TDRNVITWTALISA 547
M V W AL+SA
Sbjct: 484 CMPVQPGVTVWGALLSA 500
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 127/254 (50%), Gaps = 3/254 (1%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEG 58
+P+R +VS+ +I+SAY++ G +AL +F M +P +L+ + + +G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ ASV+K GL + +L +Y + G + +F+ M +L+ WN+++S + K
Sbjct: 242 RSIHASVVKMGLEIEPDLL-ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G+ + + +F E++ +V S I + LE ++ V ++ + ++ +
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+++L++M+ +C + A +F RDVV W+ +I +A+ LY M V
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420
Query: 239 FPNQTTFVYVINSC 252
PN TF+ ++ +C
Sbjct: 421 HPNDVTFLGLLMAC 434
>sp|Q9C9I3|PP115_ARATH Pentatricopeptide repeat-containing protein At1g71460,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-A3 PE=2
SV=1
Length = 689
Score = 270 bits (689), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 184/628 (29%), Positives = 305/628 (48%), Gaps = 41/628 (6%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC--DSLNPVEGAQLQASVLKNGL 70
I ++R +E AL + Y+ RG TF LL + + G Q+ + NGL
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 71 FCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS---IFGKHGFVEDCMF 127
++ F+ T L+ +Y G + + VF++ ++ +WN+++ I GK + +D +
Sbjct: 143 E-SNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRY-QDVLS 200
Query: 128 LFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYF 187
F E+ V L S V + L G + H L IKNG + + SLV+MYF
Sbjct: 201 TFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYF 260
Query: 188 QCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM-SVDIVFPNQTTFV 246
+C + A ++F ++ RD+V W +I LA ++ +AL L+ M S + ++PN
Sbjct: 261 KCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILT 320
Query: 247 YVINSCAGLQNSILGKSIHAKVIK--NALECDVFVGSALVDFYAKCDNLEGAHLCFSEIS 304
++ ++ LGK +HA V+K N +E FV S L+D Y KC ++ F
Sbjct: 321 TILPVLGDVKALKLGKEVHAHVLKSKNYVE-QPFVHSGLIDLYCKCGDMASGRRVFYGSK 379
Query: 305 NKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCL 363
+N +SW AL+ GYA+ ++ ++ + Q G+RP+ T + VL +
Sbjct: 380 QRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELR------- 432
Query: 364 IIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNE 423
I+ G E + Y L +L ++ VT+L + +Y++ G
Sbjct: 433 AIKQGKEIHCYALKNLFLP---------NVSLVTSLMV------------MYSKCGVPEY 471
Query: 424 TVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSK 483
++L +LE+ ++ +W +I N D + +E+F+ M ++ PD+ T +L+ CS
Sbjct: 472 PIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSD 531
Query: 484 LCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTA 543
L L LG LHG I K E S FV +I MYGKCG + S+ F+ + + +TWTA
Sbjct: 532 LKALKLGKELHGHILKKEF-ESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTA 590
Query: 544 LISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSY 603
+I A G N + A+ F +M GF P+ AVL+ C G V E F M R Y
Sbjct: 591 IIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMY 650
Query: 604 GVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
++P +HY V++LL R G ++EA+++
Sbjct: 651 NLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/562 (20%), Positives = 242/562 (43%), Gaps = 75/562 (13%)
Query: 10 NSIISAYSRCGYVEDALRMF-------LYMIN---RG--------FEPTQFTF------G 45
++ Y+ CG V+DA ++F +Y N RG ++ TF G
Sbjct: 150 TKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELG 209
Query: 46 GLLSCDSLNPV-----------EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEV 94
L+ SL+ V +G + A +KNGLF + F+ T+L+ +Y + G +
Sbjct: 210 VDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNS-VFLKTSLVDMYFKCGKVGLA 268
Query: 95 VSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHG-LSN 153
VF+++ + +V W ++++ + + + LF ++ E S + I L +
Sbjct: 269 RRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGD 328
Query: 154 EQDLEFGEQIHGLVIKN-GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNT 212
+ L+ G+++H V+K+ + + V + L+++Y +C + S ++F + R+ +SW
Sbjct: 329 VKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTA 388
Query: 213 IIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA 272
++ A + F +AL + M + P+ T V+ CA L+ GK IH +KN
Sbjct: 389 LMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNL 448
Query: 273 LECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIE 332
+V + ++L+ Y+KC E F + +N+ +W A+I Y + +
Sbjct: 449 FLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFR 508
Query: 333 LLQLG-YRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSG 387
L+ L +RP+ T VL + L +LH I++ +E+ +V ++ Y K G
Sbjct: 509 LMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCG 568
Query: 388 LISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACA 447
+ A A+ + + ++W +I A
Sbjct: 569 DLRSANFSFDAVAVKGS--------------------------------LTWTAIIEAYG 596
Query: 448 HNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDT 507
N +++ + F+ M + P+ +TF ++LS CS+ + L+ + +
Sbjct: 597 CNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSE 656
Query: 508 FVCNMLIDMYGKCGSIGSSVKI 529
+++I++ +CG + + ++
Sbjct: 657 EHYSLVIELLNRCGRVEEAQRL 678
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 129/253 (50%), Gaps = 3/253 (1%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EGAQ 60
RN +S+ +++S Y+ G + ALR ++M GF P T +L C L + +G +
Sbjct: 380 QRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKE 439
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
+ LKN LF + + T+L+ +Y + G + + +F+ + ++++ W +++ + ++
Sbjct: 440 IHCYALKN-LFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENC 498
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
+ + +F ++ S+ + V+ S+ + L+ G+++HG ++K F+ V+
Sbjct: 499 DLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSA 558
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
++ MY +C + SA F V ++ ++W II A +E F A+ + +M P
Sbjct: 559 RIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTP 618
Query: 241 NQTTFVYVINSCA 253
N TF V++ C+
Sbjct: 619 NTFTFTAVLSICS 631
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 269 bits (688), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 178/690 (25%), Positives = 334/690 (48%), Gaps = 48/690 (6%)
Query: 13 ISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQLQASVLKNGL 70
+S+ + G +++AL + M R +G +L + G Q+ A +LKNG
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 71 FCA-DAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLF 129
F A + ++ T L+ Y + L+ +F + +++ +W +I+ + + G E + F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 130 CELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQC 189
E++ +E+ V + FG +HG V+K+G + + VA+SL +MY +C
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC 221
Query: 190 AGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVI 249
+ A K+F ++ R+ V+WN ++ ++ +A+ L+ M V P + T +
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 250 NSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIV 309
++ A + GK HA I N +E D +G++L++FY K +E A + F + K++V
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVV 341
Query: 310 SWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLRSSLAFQLLQL----HCLI 364
+WN +I GY + + +L++L + + T + ++ ++ + L+L C
Sbjct: 342 TWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYC 401
Query: 365 IRMGYENYEYVLGS--------------------------------LMTSYAKSGLISDA 392
IR +E+ + VL S L+ +YA+SGL +A
Sbjct: 402 IRHSFES-DIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEA 460
Query: 393 LAFVTALN---IPRAVVPANIIAGIYNRTGQYNETVKLLSQLER----PDIVSWNIVIAA 445
L + +P V+ N+I R GQ +E + Q++ P+++SW ++
Sbjct: 461 LRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNG 520
Query: 446 CAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISS 505
NG +E + + M+ + + P+ ++ LSAC+ L +L +G ++HG I + SS
Sbjct: 521 MVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSS 580
Query: 506 DTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREME 565
+ L+DMY KCG I + K+F + A+ISA L G + A+ +R +E
Sbjct: 581 LVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLE 640
Query: 566 FLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHL 625
+G KPD + + VL+AC H G + + +E+F + ++P ++HY +VDLL G
Sbjct: 641 GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGET 700
Query: 626 KEAEKIITTMPFPPNALIWRTFLEGCQRCR 655
++A ++I MPF P+A + ++ + C + R
Sbjct: 701 EKALRLIEEMPFKPDARMIQSLVASCNKQR 730
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 155/618 (25%), Positives = 286/618 (46%), Gaps = 113/618 (18%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDS-LNPV-EG 58
+PDRN V++N+++ Y + G E+A+R+F M +G EPT+ T LS + + V EG
Sbjct: 234 IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEG 293
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q A + NG+ D +GT+LL Y + G ++ VF+ M K +VTWN I+S + +
Sbjct: 294 KQSHAIAIVNGMEL-DNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQ 352
Query: 119 HGFVEDCMFLFCELVRSEVALTES-SFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
G VED +++ C+L+R E + + ++ + ++L+ G+++ I++ F+ +++
Sbjct: 353 QGLVEDAIYM-CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV 411
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
+A+++++MY +C I A+K+F +D++ WNT++ A AES G+AL L+ M ++
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
V PN T+ +I S L+N G+ AK D+F+ ++ +
Sbjct: 472 VPPNVITWNLIILSL--LRN---GQVDEAK--------DMFL------------QMQSSG 506
Query: 298 LCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQ 356
+ N++SW ++ G S +I L ++ + G RPN F+ + L S
Sbjct: 507 II------PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVAL--SACAH 558
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
L LH +G + Y++ +L S L+S + V +Y
Sbjct: 559 LASLH-----IGRTIHGYIIRNLQ----HSSLVSIETSLVD----------------MYA 593
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G N+ K+ ++ N +I+A A G+ KE + L++ + + PDN T +
Sbjct: 594 KCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITN 653
Query: 477 LLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR 536
+LSAC+ G I +++IF ++ +
Sbjct: 654 VLSACN------------------------------------HAGDINQAIEIFTDIVSK 677
Query: 537 NVIT-----WTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVRE 591
+ + ++ L G ++AL EM FKPD + +++ +C +
Sbjct: 678 RSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP---FKPDARMIQSLVASCNK----QR 730
Query: 592 GMELFERMNRS-YGVEPE 608
EL + ++R EPE
Sbjct: 731 KTELVDYLSRKLLESEPE 748
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 269 bits (687), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 181/622 (29%), Positives = 297/622 (47%), Gaps = 53/622 (8%)
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTA--LLGLYGRHGCLDEVVSVFEDMPRKSLVTWNS 111
N V G + +++ G A + A L+ Y + G L + S+F + K +V+WNS
Sbjct: 29 NLVAGRAVHGQIIRTG---ASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNS 85
Query: 112 IVSIFGKHGFVEDC---MFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVI 168
+++ + ++G + M LF E+ ++ + G+ S+ Q G Q H LV+
Sbjct: 86 LITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVV 145
Query: 169 KNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAES---ENFGK 225
K ++ V SLV MY + + K+F + R+ +W+T++ A E K
Sbjct: 146 KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIK 205
Query: 226 ALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
L+LR + + F V++S A LG+ IH IKN L V + +ALV
Sbjct: 206 VFNLFLREKEEGS-DSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVT 264
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFT 344
Y+KC++L A F ++N ++W+A++ GY+ S ++ L + G +P+E+T
Sbjct: 265 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYT 324
Query: 345 FSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
VL + L QLH ++++G+E + + +L+ YAK+G ++DA
Sbjct: 325 IVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA-------- 376
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
R G L+ D+ W +I+ N D +E L L++
Sbjct: 377 ----------------RKG--------FDCLQERDVALWTSLISGYVQNSDNEEALILYR 412
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
M+ A I P++ T S+L ACS L L LG +HG K + + + L MY KC
Sbjct: 413 RMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK-HGFGLEVPIGSALSTMYSKC 471
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
GS+ +F +++V++W A+IS L NG ALE F EM G +PD V + ++
Sbjct: 472 GSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNII 531
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
+AC H G V G F M+ G++P++DHY C+VDLL R G LKEA++ I +
Sbjct: 532 SACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHG 591
Query: 641 ALIWRTFLEGCQ---RCRIAKY 659
+WR L C+ +C + Y
Sbjct: 592 LCLWRILLSACKNHGKCELGVY 613
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 178/629 (28%), Positives = 309/629 (49%), Gaps = 68/629 (10%)
Query: 4 RNVVSFNSIISAYSRCGYVEDA---LRMFLYMINRGFEPTQFTFGGLLSCDS--LNPVEG 58
++VVS+NS+I+ YS+ G + + +++F M + P +T G+ +S + G
Sbjct: 78 KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVG 137
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q A V+K F D +V T+L+G+Y + G +++ + VF MP ++ TW+++VS +
Sbjct: 138 RQAHALVVKMSSF-GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFV--GVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
G VE+ + +F +R + ++S +V V+ L+ + G QIH + IKNG +
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++N+LV MY +C + A KMF R+ ++W+ ++ +++ +A++L+ RM
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ P++ T V V+N+C+ + GK +H+ ++K E +F +ALVD YAK L A
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL-GYRPNEFTFSHVLR--SSL 353
F + +++ W +LI GY S +L ++ G PN+ T + VL+ SSL
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 436
Query: 354 AFQLL--QLHCLIIRMGYENYEYVLGS-LMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
A L Q+H I+ G+ E +GS L T Y+K G + D N+
Sbjct: 437 ATLELGKQVHGHTIKHGF-GLEVPIGSALSTMYSKCGSLEDG-------NL--------- 479
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
++ RT D+VSWN +I+ +HNG E LELF+ M A + PD
Sbjct: 480 ---VFRRT-------------PNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPD 523
Query: 471 NYTFVSLLSACSKLCNLALG-------SSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ TFV+++SACS + G S GL K D + C ++D+ + G +
Sbjct: 524 DVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKV-----DHYAC--MVDLLSRAGQL 576
Query: 524 GSSVKIFNEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR--VALIAVL 580
+ + D + W L+SA +G + + ++ LG + V L +
Sbjct: 577 KEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIY 636
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEM 609
TA G +R+ +++ M R+ GV E+
Sbjct: 637 TAL---GRMRDVERVWKHM-RANGVSKEV 661
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 131/519 (25%), Positives = 258/519 (49%), Gaps = 26/519 (5%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE--PTQFTFGGLLS--CDSLNPV 56
MP+RN ++++++S Y+ G VE+A+++F + E + + F +LS ++
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 57 EGAQLQASVLKNGLFCADAFVG--TALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVS 114
G Q+ +KNGL FV AL+ +Y + L+E +F+ ++ +TW+++V+
Sbjct: 239 LGRQIHCITIKNGLL---GFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVT 295
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+ ++G + + LF + + + +E + VGV++ S+ LE G+Q+H ++K GF+
Sbjct: 296 GYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFER 355
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
L +LV+MY + + A K F ++ RDV W ++I ++ + +AL LY RM
Sbjct: 356 HLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 415
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ PN T V+ +C+ L LGK +H IK+ +V +GSAL Y+KC +LE
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLE 475
Query: 295 GAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
+L F NK++VSWNA+I G + + ++ L E+L G P++ TF +++ +
Sbjct: 476 DGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACS 535
Query: 354 AFQLLQ-----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
++ + + ++G + ++ +++G + +A F+ + NI +
Sbjct: 536 HKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLW 595
Query: 409 NIIAGIYNRTGQ------YNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYM 462
I+ G+ E + L E V + + A G ++V ++K+M
Sbjct: 596 RILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTAL---GRMRDVERVWKHM 652
Query: 463 RAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTE 501
RA + + S + ++ +G ++H +I++T+
Sbjct: 653 RANGVSKE--VGCSWIELKNQYHVFVVGDTMHPMIEETK 689
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 216/466 (46%), Gaps = 56/466 (12%)
Query: 152 SNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWN 211
S +++L G +HG +I+ G + AN LVN Y +C + A +F + +DVVSWN
Sbjct: 25 SQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWN 84
Query: 212 TIIGALAESENFGKA---LELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKV 268
++I +++ + ++L+ M + PN T + + + LQ+S +G+ HA V
Sbjct: 85 SLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALV 144
Query: 269 IKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASK---SSPT 325
+K + D++V ++LV Y K +E F+ + +N +W+ ++ GYA++
Sbjct: 145 VKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAI 204
Query: 326 SIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL-----QLHCLIIRMGYENYEYVLGSLM 380
+F L + +++ F+ VL SSLA + Q+HC+ I+ G
Sbjct: 205 KVFNLFLREKEEGSDSDYVFTAVL-SSLAATIYVGLGRQIHCITIKNGL----------- 252
Query: 381 TSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWN 440
L FV +N + +Y++ NE K+ + ++W+
Sbjct: 253 ------------LGFVAL---------SNALVTMYSKCESLNEACKMFDSSGDRNSITWS 291
Query: 441 IVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKT 500
++ + NG+ E ++LF M +A I P YT V +L+ACS +C L G LH + K
Sbjct: 292 AMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL 351
Query: 501 EIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEK 560
F L+DMY K G + + K F+ + +R+V WT+LIS N + AL
Sbjct: 352 G-FERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALIL 410
Query: 561 FREMEFLGFKPDRVALIAVLTACR-----------HGGLVREGMEL 595
+R M+ G P+ + +VL AC HG ++ G L
Sbjct: 411 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGL 456
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 197/423 (46%), Gaps = 49/423 (11%)
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
P+ +T + + + +N + G+++H ++I+ + + LV+FYAKC L AH
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 300 FSEISNKNIVSWNALILGYAS----KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF 355
F+ I K++VSWN+LI GY+ SS T + L E+ PN +T + + ++ +
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 356 QL----LQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
Q Q H L+++M YV SL+ Y K+GL+ D L
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGL------------------ 173
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK-YMRAARIYPD 470
K+ + + + +W+ +++ A G +E +++F ++R D
Sbjct: 174 --------------KVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD 219
Query: 471 -NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVC--NMLIDMYGKCGSIGSSV 527
+Y F ++LS+ + + LG +H + K ++ FV N L+ MY KC S+ +
Sbjct: 220 SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLG---FVALSNALVTMYSKCESLNEAC 276
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
K+F+ DRN ITW+A+++ NG + A++ F M G KP ++ VL AC
Sbjct: 277 KMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDIC 336
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
+ EG +L + + G E + +VD+ + G L +A K + AL W +
Sbjct: 337 YLEEGKQLHSFLLK-LGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVAL-WTSL 394
Query: 648 LEG 650
+ G
Sbjct: 395 ISG 397
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 267 bits (682), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 196/658 (29%), Positives = 327/658 (49%), Gaps = 50/658 (7%)
Query: 5 NVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQLQ 62
NV +N+II+ R +F M +P +T+ +L+ C SL + G +Q
Sbjct: 215 NVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQ 274
Query: 63 ASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFV 122
A V+K G D FV TA++ LY + G + E + VF +P S+V+W ++S + K
Sbjct: 275 ARVIKCG--AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDA 332
Query: 123 EDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSL 182
+ +F E+ S V + + VI + Q+H V K+GF + VA +L
Sbjct: 333 FSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAAL 392
Query: 183 VNMYFQCAGIWSAEKMFKD---VEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
++MY + I +E++F+D ++ +++V N +I + ++S+ GKA+ L+ RM + +
Sbjct: 393 ISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLR 450
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
++ + +++ L LGK +H +K+ L D+ VGS+L Y+KC +LE ++
Sbjct: 451 TDEFSVCSLLSVLDCLN---LGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKL 507
Query: 300 FSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
F I K+ W ++I G+ +I L E+L G P+E T + VL + L
Sbjct: 508 FQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSL 567
Query: 359 ----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGI 414
++H +R G + + +L+ Y+K G +L + R V
Sbjct: 568 PRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG----------SLKLARQV--------- 608
Query: 415 YNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTF 474
Y+R L D VS + +I+ + +G ++ LF+ M + D++
Sbjct: 609 YDR-------------LPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAI 655
Query: 475 VSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMT 534
S+L A + +LG+ +H I K + + + V + L+ MY K GSI K F+++
Sbjct: 656 SSILKAAALSDESSLGAQVHAYITKIGLCTEPS-VGSSLLTMYSKFGSIDDCCKAFSQIN 714
Query: 535 DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGME 594
++I WTALI++ +G A AL+ + M+ GFKPD+V + VL+AC HGGLV E
Sbjct: 715 GPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYF 774
Query: 595 LFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
M + YG+EPE HY C+VD L R G L+EAE I M P+AL+W T L C+
Sbjct: 775 HLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACK 832
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 160/581 (27%), Positives = 277/581 (47%), Gaps = 42/581 (7%)
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
LQA +L+ L D F+ +LL Y G + + +F+ +P+ +V+ N ++S + +H
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129
Query: 121 FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVAN 180
E+ + F ++ E S+ VI S Q F E + IK G+ + +V +
Sbjct: 130 LFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVES 189
Query: 181 SLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFP 240
+L++++ + A K+F+D +V WNTII ++N+G +L+ M V P
Sbjct: 190 ALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKP 249
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
+ T+ V+ +CA L+ GK + A+VIK E DVFV +A+VD YAKC ++ A F
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 301 SEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVL----RSSLAF 355
S I N ++VSW ++ GY S + +++ + E+ G N T + V+ R S+
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 356 QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIY 415
+ Q+H + + G+ V +L++ Y+KSG I +
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLS----------------------- 405
Query: 416 NRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFV 475
+ + L ++R +IV N++I + + + + + LF M + D ++
Sbjct: 406 ------EQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVC 457
Query: 476 SLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTD 535
SLLS L L LG +HG K+ ++ D V + L +Y KCGS+ S K+F +
Sbjct: 458 SLLSV---LDCLNLGKQVHGYTLKSGLV-LDLTVGSSLFTLYSKCGSLEESYKLFQGIPF 513
Query: 536 RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMEL 595
++ W ++IS G+ + A+ F EM G PD L AVLT C + G E+
Sbjct: 514 KDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI 573
Query: 596 FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMP 636
R+ G++ MD +V++ + G LK A ++ +P
Sbjct: 574 HGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 153/585 (26%), Positives = 275/585 (47%), Gaps = 64/585 (10%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPV-EG 58
+P+ +VVS+ ++S Y++ AL +F M + G E T ++S C + V E
Sbjct: 311 IPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA 370
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDM---PRKSLVTWNSIVSI 115
+Q+ A V K+G + D+ V AL+ +Y + G +D VFED+ R+++V N +++
Sbjct: 371 SQVHAWVFKSGFYL-DSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITS 427
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
F + + LF +++ + E S ++ L L G+Q+HG +K+G +
Sbjct: 428 FSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDC---LNLGKQVHGYTLKSGLVLD 484
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
L V +SL +Y +C + + K+F+ + +D W ++I E +A+ L+ M
Sbjct: 485 LTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLD 544
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D P+++T V+ C+ + GK IH ++ ++ + +GSALV+ Y+KC +L+
Sbjct: 545 DGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKL 604
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLR---- 350
A + + + VS ++LI GY+ FLL +++ G+ + F S +L+
Sbjct: 605 ARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAAL 664
Query: 351 ---SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
SSL Q+H I ++G V SL+T Y+K G I D + +N P
Sbjct: 665 SDESSLG---AQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGP----- 716
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
D+++W +IA+ A +G E L+++ M+
Sbjct: 717 ---------------------------DLIAWTALIASYAQHGKANEALQVYNLMKEKGF 749
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLH--GLIKKTEIISSDT-FVCNMLIDMYGKCGSIG 524
PD TFV +LSACS L S H ++K I + +VC ++D G+ G +
Sbjct: 750 KPDKVTFVGVLSACSH-GGLVEESYFHLNSMVKDYGIEPENRHYVC--MVDALGRSGRLR 806
Query: 525 SSVKIFNEMTDR-NVITWTALISALGLNG---FAQRALEKFREME 565
+ N M + + + W L++A ++G + A +K E+E
Sbjct: 807 EAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELE 851
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 152/591 (25%), Positives = 274/591 (46%), Gaps = 48/591 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLN-PVEG 58
+P +VVS N +IS Y + E++LR F M GFE + ++G ++S C +L P+
Sbjct: 110 IPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFS 169
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
+ +K G F + V +AL+ ++ ++ ++ VF D ++ WN+I++ +
Sbjct: 170 ELVCCHTIKMGYFFYEV-VESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALR 228
Query: 119 ---HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+G V D C + + T SS V+ ++ + L FG+ + VIK G + +
Sbjct: 229 NQNYGAVFDLFHEMCVGFQKPDSYTYSS---VLAACASLEKLRFGKVVQARVIKCGAE-D 284
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ V ++V++Y +C + A ++F + VVSW ++ +S + ALE++ M
Sbjct: 285 VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRH 344
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
V N T VI++C +HA V K+ D V +AL+ Y+K +++
Sbjct: 345 SGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDL 404
Query: 296 AHLCF---SEISNKNIVSWNALILGYASKSSP-TSIFLLIELLQLGYRPNEFTFSHVLRS 351
+ F +I +NIV N +I ++ P +I L +LQ G R +EF+ +L
Sbjct: 405 SEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV 462
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
L CL +G + + Y L KSGL+ D + + +
Sbjct: 463 --------LDCL--NLGKQVHGYTL--------KSGLVLD-------------LTVGSSL 491
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDN 471
+Y++ G E+ KL + D W +I+ G +E + LF M PD
Sbjct: 492 FTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDE 551
Query: 472 YTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFN 531
T ++L+ CS +L G +HG + I + + L++MY KCGS+ + ++++
Sbjct: 552 STLAAVLTVCSSHPSLPRGKEIHGYTLRAG-IDKGMDLGSALVNMYSKCGSLKLARQVYD 610
Query: 532 EMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTA 582
+ + + ++ ++LIS +G Q FR+M GF D A+ ++L A
Sbjct: 611 RLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA 661
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 54/102 (52%)
Query: 482 SKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITW 541
S+LCNL L + + ++ D F+ L+ Y GS+ + K+F+ + +V++
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 542 TALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTAC 583
+IS + + +L F +M FLGF+ + ++ +V++AC
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISAC 160
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/514 (30%), Positives = 265/514 (51%), Gaps = 51/514 (9%)
Query: 150 GLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
GLS++ G Q+H ++K+G L+ +N L++MY +C A K+F + R+VVS
Sbjct: 20 GLSDQ-----GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVS 74
Query: 210 WNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVI 269
W+ ++ + + +L L+ M ++PN+ TF + +C L G IH +
Sbjct: 75 WSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCL 134
Query: 270 KNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILG-----YASKSSP 324
K E V VG++LVD Y+KC + A F I +++++SWNA+I G Y SK+
Sbjct: 135 KIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALD 194
Query: 325 TSIFLLIELLQLGYRPNEFTFSHVLR----SSLAFQLLQLHCLIIRMGYE--NYEYVLGS 378
T F +++ + RP+EFT + +L+ + + + Q+H ++R G+ + + GS
Sbjct: 195 T--FGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGS 252
Query: 379 LMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVS 438
L+ Y K G + A K Q++ ++S
Sbjct: 253 LVDLYVKCGYLFSAR--------------------------------KAFDQIKEKTMIS 280
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
W+ +I A G++ E + LFK ++ D++ S++ + L G + L
Sbjct: 281 WSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAV 340
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
K +T V N ++DMY KCG + + K F EM ++VI+WT +I+ G +G ++++
Sbjct: 341 KLPS-GLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSV 399
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDL 618
F EM +PD V +AVL+AC H G+++EG ELF ++ ++G++P ++HY CVVDL
Sbjct: 400 RIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDL 459
Query: 619 LVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L R G LKEA+ +I TMP PN IW+T L C+
Sbjct: 460 LGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCR 493
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 237/508 (46%), Gaps = 47/508 (9%)
Query: 57 EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVS--VFEDMPRKSLVTWNSIVS 114
+G Q+ +LK+G + L+ +Y + C + +++ VF+ MP +++V+W++++S
Sbjct: 24 QGGQVHCYLLKSG-SGLNLITSNYLIDMYCK--CREPLMAYKVFDSMPERNVVSWSALMS 80
Query: 115 IFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDY 174
+G ++ + LF E+ R + E +F + LE G QIHG +K GF+
Sbjct: 81 GHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEM 140
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ V NSLV+MY +C I AEK+F+ + R ++SWN +I + KAL+ + M
Sbjct: 141 MVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQ 200
Query: 235 VDIV--FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC--DVFVGSALVDFYAKC 290
+ P++ T ++ +C+ GK IH ++++ C + +LVD Y KC
Sbjct: 201 EANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC 260
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQ-LGYRPNEFTFSHVL 349
L A F +I K ++SW++LILGYA + L + LQ L + + F S ++
Sbjct: 261 GYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSII 320
Query: 350 RSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAV 405
F LL Q+ L +++ VL S++ Y K GL+
Sbjct: 321 GVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLV---------------- 364
Query: 406 VPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAA 465
+E K ++++ D++SW +VI +G K+ + +F M
Sbjct: 365 ----------------DEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH 408
Query: 466 RIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGS 525
I PD ++++LSACS + G L + +T I ++D+ G+ G +
Sbjct: 409 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKE 468
Query: 526 SVKIFNEMTDR-NVITWTALISALGLNG 552
+ + + M + NV W L+S ++G
Sbjct: 469 AKHLIDTMPIKPNVGIWQTLLSLCRVHG 496
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 228/491 (46%), Gaps = 45/491 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFG-GLLSCDSLNPVE-G 58
MP+RNVVS+++++S + G ++ +L +F M +G P +FTF L +C LN +E G
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
Q+ LK G F VG +L+ +Y + G ++E VF + +SL++WN++++ F
Sbjct: 127 LQIHGFCLKIG-FEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 119 HGFVEDCMFLFCELVRSEVALTESSF--VGVIHGLSNEQDLEFGEQIHGLVIKNGFD--Y 174
G+ + F + + + F ++ S+ + G+QIHG ++++GF
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 175 ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMS 234
+ SLV++Y +C ++SA K F ++ + ++SW+++I A+ F +A+ L+ R+
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ +I A GK + A +K + V +++VD Y KC ++
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 295 GAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A CF+E+ K+++SW +I GY S+ + E+L+ P+E + VL
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVL---- 421
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA----N 409
++ + SG+I + + L + P
Sbjct: 422 ---------------------------SACSHSGMIKEGEELFSKLLETHGIKPRVEHYA 454
Query: 410 IIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAACAHNGDYKEVLELFK-YMRAARI 467
+ + R G+ E L+ + +P++ W +++ C +GD + E+ K +R
Sbjct: 455 CVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAK 514
Query: 468 YPDNYTFVSLL 478
P NY +S L
Sbjct: 515 NPANYVMMSNL 525
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 195/423 (46%), Gaps = 45/423 (10%)
Query: 238 VFPNQ-TTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ PNQ V ++ C S G +H ++K+ ++ + L+D Y KC A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 297 HLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRS---- 351
+ F + +N+VSW+AL+ G+ S+ L E+ + G PNEFTFS L++
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 352 SLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANII 411
+ + LQ+H +++G+E V SL+ Y+K G I
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI---------------------- 158
Query: 412 AGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI--YP 469
NE K+ ++ ++SWN +IA H G + L+ F M+ A I P
Sbjct: 159 ----------NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERP 208
Query: 470 DNYTFVSLLSACSKLCNLALGSSLHG-LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
D +T SLL ACS + G +HG L++ S + L+D+Y KCG + S+ K
Sbjct: 209 DEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARK 268
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
F+++ ++ +I+W++LI G A+ F+ ++ L + D AL +++ L
Sbjct: 269 AFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFAL 328
Query: 589 VREGMELFE-RMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
+R+G ++ + G+E + + VVD+ ++ G + EAEK M + + W
Sbjct: 329 LRQGKQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVDEAEKCFAEMQL-KDVISWTVV 385
Query: 648 LEG 650
+ G
Sbjct: 386 ITG 388
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 168/600 (28%), Positives = 282/600 (47%), Gaps = 43/600 (7%)
Query: 54 NPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIV 113
+P+ + +LK G C D F LL Y + G + +++F++MP ++ V++ ++
Sbjct: 64 DPISAKAIHCDILKKG-SCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLA 122
Query: 114 SIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFD 173
+ +D + L+ L R L F + + E +H ++K G+D
Sbjct: 123 QGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYD 178
Query: 174 YELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRM 233
V +L+N Y C + SA +F+ + +D+V W I+ E+ F +L+L M
Sbjct: 179 SNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCM 238
Query: 234 SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNL 293
+ PN TF + + GL K +H +++K D VG L+ Y + ++
Sbjct: 239 RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDM 298
Query: 294 EGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSS 352
A F+E+ ++V W+ +I + ++ L I + + PNEFT S +L
Sbjct: 299 SDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGC 358
Query: 353 LAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPA 408
+ QLH L++++G++ YV +L+ YAK
Sbjct: 359 AIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAK----------------------- 395
Query: 409 NIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIY 468
+ + VKL ++L + VSWN VI + G+ + +F+ ++
Sbjct: 396 ---------CEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVS 446
Query: 469 PDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVK 528
TF S L AC+ L ++ LG +HGL KT + V N LIDMY KCG I +
Sbjct: 447 VTEVTFSSALGACASLASMDLGVQVHGLAIKTNN-AKKVAVSNSLIDMYAKCGDIKFAQS 505
Query: 529 IFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGL 588
+FNEM +V +W ALIS +G ++AL M+ KP+ + + VL+ C + GL
Sbjct: 506 VFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGL 565
Query: 589 VREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ +G E FE M R +G+EP ++HY C+V LL R G L +A K+I +P+ P+ +IWR L
Sbjct: 566 IDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAML 625
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 163/621 (26%), Positives = 290/621 (46%), Gaps = 57/621 (9%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSC-DSLNPVE-G 58
MP+RN VSF ++ Y+ +D + ++ + G E F L SL+ E
Sbjct: 110 MPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEIC 165
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
L + ++K G + ++AFVG AL+ Y G +D +VFE + K +V W IVS + +
Sbjct: 166 PWLHSPIVKLG-YDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVE 224
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
+G+ ED + L + + +F + +F + +HG ++K + + V
Sbjct: 225 NGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRV 284
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
L+ +Y Q + A K+F ++ DVV W+ +I ++ +A++L++RM V
Sbjct: 285 GVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFV 344
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
PN+ T ++N CA + S LG+ +H V+K + D++V +AL+D YAKC+ ++ A
Sbjct: 345 VPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVK 404
Query: 299 CFSEISNKNIVSWNALILGYASKSSPTSIF-LLIELLQLGYRPNEFTFSHVLR--SSLAF 355
F+E+S+KN VSWN +I+GY + F + E L+ E TFS L +SLA
Sbjct: 405 LFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLAS 464
Query: 356 QLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L Q+H L I+ V SL+ YAK G I
Sbjct: 465 MDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDI------------------------ 500
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
++ ++V +++E D+ SWN +I+ + +G ++ L + M+ P+ T
Sbjct: 501 ------KFAQSV--FNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLT 552
Query: 474 FVSLLSACSKLCNLALGSS-LHGLIKKTEIISS-DTFVCNMLIDMYGKCGSIGSSVKIFN 531
F+ +LS CS + G +I+ I + + C ++ + G+ G + ++K+
Sbjct: 553 FLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTC--MVRLLGRSGQLDKAMKLIE 610
Query: 532 EMT-DRNVITWTALISA-LGLNG--FAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
+ + +V+ W A++SA + N FA+R+ E E L P A +++ G
Sbjct: 611 GIPYEPSVMIWRAMLSASMNQNNEEFARRSAE-----EILKINPKDEATYVLVSNMYAGA 665
Query: 588 LVREGMELFERMNRSYGVEPE 608
+ + + GV+ E
Sbjct: 666 KQWANVASIRKSMKEMGVKKE 686
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 181/423 (42%), Gaps = 44/423 (10%)
Query: 234 SVDIVFPNQTTFVY--VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCD 291
S D + P + Y ++ C + I K+IH ++K D+F + L++ Y K
Sbjct: 39 SSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAG 98
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS 351
+ A F E+ +N VS+ L GYA + I L L + G+ N F+ L+
Sbjct: 99 FDKDALNLFDEMPERNNVSFVTLAQGYACQD---PIGLYSRLHREGHELNPHVFTSFLKL 155
Query: 352 SLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVP 407
++ + LH I+++GY++ +V +L+ +Y+ G + A + VV
Sbjct: 156 FVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVW 215
Query: 408 ANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARI 467
A I++ Y G + +++KLLS C MR A
Sbjct: 216 AGIVS-CYVENGYFEDSLKLLS----------------C---------------MRMAGF 243
Query: 468 YPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSV 527
P+NYTF + L A L +HG I KT + D V L+ +Y + G + +
Sbjct: 244 MPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV-LDPRVGVGLLQLYTQLGDMSDAF 302
Query: 528 KIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGG 587
K+FNEM +V+ W+ +I+ NGF A++ F M P+ L ++L C G
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
G +L + + G + ++ + ++D+ + + A K+ + N + W T
Sbjct: 363 CSGLGEQLHGLVVK-VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS-SKNEVSWNTV 420
Query: 648 LEG 650
+ G
Sbjct: 421 IVG 423
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 262 bits (669), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 174/606 (28%), Positives = 297/606 (49%), Gaps = 34/606 (5%)
Query: 52 SLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMP--RKSLVTW 109
S N V G + +LK L + + V L LY ++ VF+++P R + + W
Sbjct: 12 SRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAW 71
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
+ ++ + + F E + L+ +++ S V T+ ++ V+ + + ++ G+ IH V
Sbjct: 72 DLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNC 131
Query: 170 NGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALEL 229
+ F ++ V +LV+ Y +C + A K+F ++ RD+V+WN +I + + L
Sbjct: 132 SDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGL 191
Query: 230 YLRMS-VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
+L M +D + PN +T V + + GK++H + D+ V + ++D YA
Sbjct: 192 FLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYA 251
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHV 348
K + A F KN V+W+A+I GY E+++ E F +
Sbjct: 252 KSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN----------EMIK---EAGEVFFQML 298
Query: 349 LRSSLAFQLLQLHCLIIRMGYENY-EYVLGSLMTSYA-KSGLISDALAFVTALNIPRAVV 406
+ ++A + + +I MG + + G + YA K+G I D +
Sbjct: 299 VNDNVAM-VTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILD-------------LT 344
Query: 407 PANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR 466
N I Y + G + + S++ D++S+N +I C N +E LF MR +
Sbjct: 345 VQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSG 404
Query: 467 IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSS 526
I PD T + +L+ACS L L GSS HG + +T +CN L+DMY KCG + +
Sbjct: 405 IRPDITTLLGVLTACSHLAALGHGSSCHGYCV-VHGYAVNTSICNALMDMYTKCGKLDVA 463
Query: 527 VKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHG 586
++F+ M R++++W ++ G++G + AL F M+ G PD V L+A+L+AC H
Sbjct: 464 KRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHS 523
Query: 587 GLVREGMELFERMNR-SYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWR 645
GLV EG +LF M+R + V P +DHY+C+ DLL R G+L EA + MPF P+ +
Sbjct: 524 GLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLG 583
Query: 646 TFLEGC 651
T L C
Sbjct: 584 TLLSAC 589
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 150/586 (25%), Positives = 279/586 (47%), Gaps = 39/586 (6%)
Query: 2 PDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEGAQ 60
P N ++++ +I AY+ + E AL ++ M+N G PT++T+ +L +C L ++ +
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
L S + F D +V TAL+ Y + G L+ + VF++MP++ +V WN+++S F H
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 121 FVEDCMFLFCELVRSE-VALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
+ D + LF ++ R + ++ S+ VG+ L L G+ +HG + GF +L+V
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV--DI 237
++++Y + I A ++F ++ V+W+ +IG E+E +A E++ +M V ++
Sbjct: 244 TGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNV 303
Query: 238 VFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAH 297
++ CA + G+ +H +K D+ V + ++ FYAK +L A
Sbjct: 304 AMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAF 363
Query: 298 LCFSEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSLAFQ 356
FSEI K+++S+N+LI G P F L E+ G RP+ T VL +
Sbjct: 364 RQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTAC---- 419
Query: 357 LLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYN 416
H + G + Y ++ YA + I +AL +Y
Sbjct: 420 ---SHLAALGHGSSCHGYC---VVHGYAVNTSICNAL------------------MDMYT 455
Query: 417 RTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVS 476
+ G+ + ++ + + DIVSWN ++ +G KE L LF M+ + PD T ++
Sbjct: 456 KCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLA 515
Query: 477 LLSACSKLCNLALGSSLHGLIKKTE---IISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
+LSACS + G L + + + I D + C + D+ + G + + N+M
Sbjct: 516 ILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNC--MTDLLARAGYLDEAYDFVNKM 573
Query: 534 T-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA 578
+ ++ L+SA A+ E ++M+ LG + + L++
Sbjct: 574 PFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESLVLLS 619
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 207/464 (44%), Gaps = 56/464 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMIN-RGFEPTQFTFGGLLSCDSLNPV--E 57
MP R++V++N++IS +S + D + +FL M G P T G+ E
Sbjct: 164 MPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALRE 223
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + + G F D V T +L +Y + C+ VF+ +K+ VTW++++
Sbjct: 224 GKAVHGYCTRMG-FSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIG--- 279
Query: 118 KHGFVEDCMF------LFCELVRSEVALTESSFVGVI-HGLSNEQDLEFGEQIHGLVIKN 170
G+VE+ M F LV VA+ +G+I G + DL G +H +K
Sbjct: 280 --GYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKA 337
Query: 171 GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELY 230
GF +L V N++++ Y + + A + F ++ ++DV+S+N++I + ++ L+
Sbjct: 338 GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLF 397
Query: 231 LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKC 290
M + P+ TT + V+ +C+ L G S H + + + + +AL+D Y KC
Sbjct: 398 HEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKC 457
Query: 291 DNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVL 349
L+ A F + ++IVSWN ++ G+ ++ L + + G P+E T
Sbjct: 458 GKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVT----- 512
Query: 350 RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN------IPR 403
L +++++ + SGL+ + +++ IPR
Sbjct: 513 --------------------------LLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPR 546
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLE-RPDIVSWNIVIAAC 446
+ N + + R G +E ++++ PDI +++AC
Sbjct: 547 -IDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSAC 589
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 188/424 (44%), Gaps = 58/424 (13%)
Query: 245 FVYVINSCAGLQNSILGKSIHAKVIKNAL---ECDVFVGSALVDFYAKCDNLEGAHLCFS 301
F+ ++ +C +N +LG+ IH ++K +L V V L YA C+ +E A F
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN--LTRLYASCNEVELARHVFD 59
Query: 302 EISNKNI--VSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLL 358
EI + I ++W+ +I YAS + ++ L ++L G RP ++T+ VL++ + +
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 359 QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRT 418
G L+ S+ SD F T + + A+V Y +
Sbjct: 120 D----------------DGKLIHSHVNC---SD---FATDMYVCTALVD------FYAKC 151
Query: 419 GQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAAR-IYPDNYTFVSL 477
G+ +K+ ++ + D+V+WN +I+ + + +V+ LF MR + P+ T V +
Sbjct: 152 GELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGM 211
Query: 478 LSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
A + L G ++HG + S+D V ++D+Y K I + ++F+ +N
Sbjct: 212 FPALGRAGALREGKAVHGYCTRMG-FSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKN 270
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIA------VLTACRHGGLVRE 591
+TW+A+I N + A E F +M D VA++ +L C G +
Sbjct: 271 EVTWSAMIGGYVENEMIKEAGEVFFQM----LVNDNVAMVTPVAIGLILMGCARFGDLSG 326
Query: 592 GMELFERMNRSYGVEP----EMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTF 647
G R Y V+ ++ + ++ +YG L +A + + + + + + +
Sbjct: 327 G-----RCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGL-KDVISYNSL 380
Query: 648 LEGC 651
+ GC
Sbjct: 381 ITGC 384
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 261 bits (666), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/571 (28%), Positives = 298/571 (52%), Gaps = 43/571 (7%)
Query: 92 DEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGL 151
D V VF++M RK++V WN+++S + K G + F ++R EV + SFV V +
Sbjct: 165 DVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAV 224
Query: 152 SNEQDLEFGEQIHGLVIKNGFDY--ELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVS 209
S + ++ +GL++K G +Y +L V +S ++MY + I S+ ++F R++
Sbjct: 225 SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV 284
Query: 210 WNTIIGALAESENFGKALELYLRM--SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
WNT+IG +++ +++EL+L S +IV ++ T++ ++ + LQ LG+ H
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIV-SDEVTYLLAASAVSALQQVELGRQFHGF 343
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS-SPTS 326
V KN E + + ++L+ Y++C ++ + F + +++VSWN +I +
Sbjct: 344 VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEG 403
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQL----LQLHCLIIRMGYENYEYVLGSLMTS 382
+ L+ E+ + G++ + T + +L ++ + Q H +IR G + +E + L+
Sbjct: 404 LMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMNSYLIDM 462
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
Y+KSGLI I ++ +G Y E D +WN +
Sbjct: 463 YSKSGLI-------------------RISQKLFEGSG-YAER----------DQATWNSM 492
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
I+ NG ++ +F+ M I P+ T S+L ACS++ ++ LG LHG + +
Sbjct: 493 ISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR-QY 551
Query: 503 ISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFR 562
+ + FV + L+DMY K G+I + +F++ +RN +T+T +I G +G +RA+ F
Sbjct: 552 LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFL 611
Query: 563 EMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRY 622
M+ G KPD + +AVL+AC + GL+ EG+++FE M Y ++P +HY C+ D+L R
Sbjct: 612 SMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRV 671
Query: 623 GHLKEAEKIITTMPFPPN-ALIWRTFLEGCQ 652
G + EA + + + N A +W + L C+
Sbjct: 672 GRVNEAYEFVKGLGEEGNIAELWGSLLGSCK 702
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 239/478 (50%), Gaps = 17/478 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLN-PVEGA 59
M +NVV++N++IS Y + G +A R F M+ +P+ +F + S++ ++ A
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKA 233
Query: 60 QL-QASVLKNG-LFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
+ +LK G + D FV ++ + +Y G ++ VF+ +++ WN+++ ++
Sbjct: 234 NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYV 293
Query: 118 KHGFVEDCMFLFCELVRS-EVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ + + + LF E + S E+ E +++ +S Q +E G Q HG V KN + +
Sbjct: 294 QNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPI 353
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
++ NSL+ MY +C + + +F + RDVVSWNT+I A ++ + L L M
Sbjct: 354 VIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 413
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
+ T ++++ + L+N +GK HA +I+ ++ + + S L+D Y+K + +
Sbjct: 414 GFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRIS 472
Query: 297 HLCF--SEISNKNIVSWNALILGYASKSSPTSIFLLI-ELLQLGYRPNEFTFSHVLRSSL 353
F S + ++ +WN++I GY FL+ ++L+ RPN T + +L +
Sbjct: 473 QKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACS 532
Query: 354 AFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPAN 409
+ QLH IR + +V +L+ Y+K+G I A + +V
Sbjct: 533 QIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTT 592
Query: 410 IIAGIYNRTGQYNETVKLLSQLE----RPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+I G Y + G + L ++ +PD +++ V++AC+++G E L++F+ MR
Sbjct: 593 MILG-YGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMR 649
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 136/573 (23%), Positives = 255/573 (44%), Gaps = 56/573 (9%)
Query: 97 VFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSE--VALTESSFVGVIHGLSNE 154
+F+ +P+ + V WN+I+ F + + + + + ++ ++ + +
Sbjct: 61 LFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAET 120
Query: 155 QDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWS------AEKMFKDVEIRDVV 208
++L+ G+ +H +I+ + +V NSL+NMY C K+F ++ ++VV
Sbjct: 121 KNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVV 180
Query: 209 SWNTIIGALAESENFGKALELY---LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIH 265
+WNT+I ++ +A + +RM V P+ +FV V + + ++ +
Sbjct: 181 AWNTLISWYVKTGRNAEACRQFGIMMRMEVK---PSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 266 AKVIKNALE--CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS 323
++K E D+FV S+ + YA+ ++E + F +NI WN +I Y
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDC 297
Query: 324 -PTSIFLLIELLQLGYR---PNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSL 379
SI L +E +G + +E T+ +L +S L Q + +G + + +V +
Sbjct: 298 LVESIELFLE--AIGSKEIVSDEVTY--LLAASAVSALQQ-----VELGRQFHGFVSKNF 348
Query: 380 MTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSW 439
+P +V N + +Y+R G +++ + + D+VSW
Sbjct: 349 R-------------------ELP--IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSW 387
Query: 440 NIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKK 499
N +I+A NG E L L M+ D T +LLSA S L N +G H + +
Sbjct: 388 NTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIR 447
Query: 500 TEIISSDTFVCNMLIDMYGKCGSIGSSVKIF--NEMTDRNVITWTALISALGLNGFAQRA 557
I + + LIDMY K G I S K+F + +R+ TW ++IS NG ++
Sbjct: 448 QGIQFEG--MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKT 505
Query: 558 LEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVD 617
FR+M +P+ V + ++L AC G V G +L R Y ++ + +VD
Sbjct: 506 FLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVD 564
Query: 618 LLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + G +K AE + + N++ + T + G
Sbjct: 565 MYSKAGAIKYAEDMFSQTK-ERNSVTYTTMILG 596
Score = 119 bits (297), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 211/484 (43%), Gaps = 74/484 (15%)
Query: 195 AEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVY--VINSC 252
A ++F + V WNTII + +AL Y RM F N + Y + +C
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 253 AGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDN------LEGAHLCFSEISNK 306
A +N GK++H +I+ V ++L++ Y C N + F + K
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 307 NIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS-SLAFQLLQ---LH 361
N+V+WN LI Y + + + ++++ +P+ +F +V + S++ + + +
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 362 CLIIRMGYENYE--YVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
L++++G E + +V+ S ++ YA+ G I + R V
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDIESS----------RRVFD------------ 275
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELF-KYMRAARIYPDNYTFVSLL 478
S +ER +I WN +I N E +ELF + + + I D T++
Sbjct: 276 ---------SCVER-NIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAA 325
Query: 479 SACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
SA S L + LG HG + K + N L+ MY +CGS+ S +F M +R+V
Sbjct: 326 SAVSALQQVELGRQFHGFVSKN-FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDV 384
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-----------HGG 587
++W +ISA NG L EM+ GFK D + + A+L+A H
Sbjct: 385 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAF 444
Query: 588 LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPP-NALIWRT 646
L+R+G++ FE MN SY ++D+ + G ++ ++K+ + + W +
Sbjct: 445 LIRQGIQ-FEGMN-SY-----------LIDMYSKSGLIRISQKLFEGSGYAERDQATWNS 491
Query: 647 FLEG 650
+ G
Sbjct: 492 MISG 495
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 114/281 (40%), Gaps = 36/281 (12%)
Query: 292 NLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRP----NEFTFSH 347
N + A F I V WN +I+G+ + P L ++ P + +T+S
Sbjct: 54 NPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMK-KTAPFTNCDAYTYSS 112
Query: 348 VLRSSLAFQLLQ----LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
L++ + L+ +HC +IR + V SLM Y V+ LN P
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMY------------VSCLNAPD 160
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
+Y+ K+ + R ++V+WN +I+ G E F M
Sbjct: 161 CF--------------EYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMM 206
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGS 522
+ P +FV++ A S ++ + +GL +K + D FV + I MY + G
Sbjct: 207 RMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGD 266
Query: 523 IGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFRE 563
I SS ++F+ +RN+ W +I N ++E F E
Sbjct: 267 IESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLE 307
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 260 bits (664), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 184/659 (27%), Positives = 317/659 (48%), Gaps = 46/659 (6%)
Query: 4 RNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVE-GAQL 61
R++ +NSII A+ G +L F M+ G P FT ++S C L G +
Sbjct: 88 RDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFV 147
Query: 62 QASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGF 121
VLK+G F + VG + + Y + G L + VF++MP + +V W +I+S ++G
Sbjct: 148 HGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGE 207
Query: 122 VEDCMFLFCELVRSEVALTESSFVGVIHGL---SNEQDLEFGEQIHGLVIKNGFDYELLV 178
E + C++ + + + + + G SN L+ G +HG +KNG V
Sbjct: 208 SEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFV 267
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+S+ + Y + A F+++ D+ SW +II +LA S + ++ +++ M +
Sbjct: 268 QSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGM 327
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHL 298
P+ +IN + GK+ H VI++ D V ++L+ Y K + L A
Sbjct: 328 HPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEK 387
Query: 299 CFSEISNK-NIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRS--SLA 354
F IS + N +WN ++ GY K I L ++ LG + + + V+ S +
Sbjct: 388 LFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIG 447
Query: 355 FQLL--QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
LL LHC +++ T+L++ +VV N +
Sbjct: 448 AVLLGKSLHCYVVK------------------------------TSLDLTISVV--NSLI 475
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
+Y + G ++ + + ++++WN +IA+ H ++ + LF M + P +
Sbjct: 476 DLYGKMGDLTVAWRMFCEAD-TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSI 534
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNE 532
T V+LL AC +L G +H I +TE + + LIDMY KCG + S ++F+
Sbjct: 535 TLVTLLMACVNTGSLERGQMIHRYITETEH-EMNLSLSAALIDMYAKCGHLEKSRELFDA 593
Query: 533 MTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREG 592
++ + W +IS G++G + A+ F +ME KP +A+L+AC H GLV +G
Sbjct: 594 GNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQG 653
Query: 593 MELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGC 651
+LF +M++ Y V+P + HY C+VDLL R G+L+EAE + +MPF P+ +IW T L C
Sbjct: 654 KKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSC 711
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 149/610 (24%), Positives = 266/610 (43%), Gaps = 44/610 (7%)
Query: 50 CDSLNPVEGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTW 109
CD +E + +++ G + FV + L+ Y +G + VF + R+ + W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 110 NSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIK 169
NSI+ +G + F ++ S + + V+ + G +HGLV+K
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 170 N-GFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALE 228
+ GFD V S V Y +C + A +F ++ RDVV+W II ++ L
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 229 LYLRM---SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVD 285
+M D+ PN T +C+ L G+ +H +KN L FV S++
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFS 273
Query: 286 FYAKCDNLEGAHLCFSEISNKNIVSWNALILGYA-SKSSPTSIFLLIELLQLGYRPNEFT 344
FY+K N A+L F E+ ++++ SW ++I A S S + E+ G P+
Sbjct: 274 FYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVV 333
Query: 345 FSHVL----RSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALN 400
S ++ + L Q H +IR + V SL++ Y K L+S A ++
Sbjct: 334 ISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRIS 393
Query: 401 IPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFK 460
E + +WN ++ + + +ELF+
Sbjct: 394 -------------------------------EEGNKEAWNTMLKGYGKMKCHVKCIELFR 422
Query: 461 YMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKC 520
++ I D+ + S++S+CS + + LG SLH + KT + + + V N LID+YGK
Sbjct: 423 KIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVV-NSLIDLYGKM 481
Query: 521 GSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVL 580
G + + ++F E D NVITW A+I++ +++A+ F M FKP + L+ +L
Sbjct: 482 GDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLL 540
Query: 581 TACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPN 640
AC + G + G ++ R E + ++D+ + GHL+++ ++ +
Sbjct: 541 MACVNTGSLERG-QMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN-QKD 598
Query: 641 ALIWRTFLEG 650
A+ W + G
Sbjct: 599 AVCWNVMISG 608
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 149/643 (23%), Positives = 286/643 (44%), Gaps = 76/643 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFE---PTQFTFG-GLLSCDSLNPV 56
MPDR+VV++ +IIS + + G E L M + G + P T G +C +L +
Sbjct: 187 MPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGAL 246
Query: 57 -EGAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSI 115
EG L +KNGL + FV +++ Y + G E F ++ + + +W SI++
Sbjct: 247 KEGRCLHGFAVKNGL-ASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIAS 305
Query: 116 FGKHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYE 175
+ G +E+ +F E+ + +I+ L + G+ HG VI++ F +
Sbjct: 306 LARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLD 365
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDV-EIRDVVSWNTIIGALAESENFGKALELYLRMS 234
V NSL++MY + + AEK+F + E + +WNT++ + + K +EL+ ++
Sbjct: 366 STVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQ 425
Query: 235 VDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLE 294
+ + + VI+SC+ + +LGKS+H V+K +L+ + V ++L+D Y K +L
Sbjct: 426 NLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLT 485
Query: 295 GAHLCFSEISNKNIVSWNALILGYAS-KSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSL 353
A F E ++ N+++WNA+I Y + S +I L ++ ++P+ T +L + +
Sbjct: 486 VAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACV 544
Query: 354 AFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAG 413
L+ +I R ++T + + +
Sbjct: 545 NTGSLERGQMIHR----------------------------YITETEHEMNLSLSAALID 576
Query: 414 IYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYT 473
+Y + G ++ +L + D V WN++I+ +GD + + LF M + + P T
Sbjct: 577 MYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPT 636
Query: 474 FVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEM 533
F++LLSAC+ GL+++ + + +K+
Sbjct: 637 FLALLSACTHA----------GLVEQGKKL----------------------FLKMHQYD 664
Query: 534 TDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGM 593
N+ ++ L+ L +G + A M F PD V +L++C G G+
Sbjct: 665 VKPNLKHYSCLVDLLSRSGNLEEAESTVMSMP---FSPDGVIWGTLLSSCMTHGEFEMGI 721
Query: 594 ELFERMNRSYGVEPEMDHYHCVV-DLLVRYGHLKEAEKIITTM 635
+ E R+ +P+ D Y+ ++ ++ G +EAE+ M
Sbjct: 722 RMAE---RAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMM 761
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 26/181 (14%)
Query: 484 LCNLALGSSLHGLIKKTEII-----SSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNV 538
LC+ +L SL L K +I S + FV + LI Y G S ++F+ +T R++
Sbjct: 33 LCDQSL--SLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDI 90
Query: 539 ITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR-----HGGLVREGM 593
W ++I A NG R+L F M G PD V++AC H G G+
Sbjct: 91 FLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGL 150
Query: 594 EL----FERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLE 649
L F+R N + G V + G L++A + MP + + W +
Sbjct: 151 VLKHGGFDR-NTAVGAS--------FVYFYSKCGFLQDACLVFDEMP-DRDVVAWTAIIS 200
Query: 650 G 650
G
Sbjct: 201 G 201
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 258 bits (660), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 171/634 (26%), Positives = 300/634 (47%), Gaps = 102/634 (16%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G + ++K GL +D V +A +G YGR L +F++MP++ + WN IV +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ G E + LF E+ S +S+ V ++ SN++ G QIHG V++ G + +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTI-------------IGALAESENFG 224
+ NSL+ MY + + + K+F ++ R++ SWN+I IG L E E G
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 225 ----------------------KALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGK 262
A+ + RM + + P+ ++ ++ + A + LGK
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 263 SIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKS 322
+IH +++N L DV+V + L+D Y K L A + F + KNIV+WN+L+ G
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG----- 300
Query: 323 SPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTS 382
+++ +L+ + A L+IRM
Sbjct: 301 --------------------LSYACLLKDAEA--------LMIRM--------------- 317
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLER----PDIVS 438
K G+ DA+ + N +A Y G+ + + ++ +++ P++VS
Sbjct: 318 -EKEGIKPDAITW-------------NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 439 WNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIK 498
W + + C+ NG+++ L++F M+ + P+ T +LL L L G +HG
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCL 423
Query: 499 KTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRAL 558
+ +I D +V L+DMYGK G + S+++IF + ++++ +W ++ + G + +
Sbjct: 424 RKNLIC-DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGI 482
Query: 559 EKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDL 618
F M G +PD + +VL+ C++ GLV+EG + F+ M YG+ P ++H C+VDL
Sbjct: 483 AAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDL 542
Query: 619 LVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
L R G+L EA I TM P+A IW FL C+
Sbjct: 543 LGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCK 576
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 125/591 (21%), Positives = 240/591 (40%), Gaps = 109/591 (18%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNP--VEG 58
MP R+ +++N I+ R G E A+ +F M G + T LL S EG
Sbjct: 49 MPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEG 108
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSL------------ 106
Q+ VL+ GL ++ + +L+ +Y R+G L+ VF M ++L
Sbjct: 109 RQIHGYVLRLGLE-SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTK 167
Query: 107 -----------------------VTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESS 143
VTWNS++S + G +D + + + + + + SS
Sbjct: 168 LGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSS 227
Query: 144 FVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVE 203
++ ++ L+ G+ IHG +++N Y++ V +L++MY + + A +F ++
Sbjct: 228 ISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD 287
Query: 204 IRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKS 263
+++V+WN+++ L+ + A L +RM + + P+ T+
Sbjct: 288 AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW------------------ 329
Query: 264 IHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNK----NIVSWNALILGYA 319
++L YA E A ++ K N+VSW A+ G +
Sbjct: 330 -----------------NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCS 372
Query: 320 SKSS-PTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQLHCL-IIRMGYENYEYVLG 377
+ ++ + I++ + G PN T S +L+ L CL ++ G E + + L
Sbjct: 373 KNGNFRNALKVFIKMQEEGVGPNAATMSTLLKI--------LGCLSLLHSGKEVHGFCL- 423
Query: 378 SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIV 437
+ LI DA A + +Y ++G +++ ++ +
Sbjct: 424 -------RKNLICDAYV-------------ATALVDMYGKSGDLQSAIEIFWGIKNKSLA 463
Query: 438 SWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLI 497
SWN ++ A G +E + F M A + PD TF S+LS C + G L+
Sbjct: 464 SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLM 523
Query: 498 KKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDR-NVITWTALISA 547
+ I C+ ++D+ G+ G + + M+ + + W A +S+
Sbjct: 524 RSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSS 574
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 489 LGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISAL 548
LG ++HG + K + +SDT V + + YG+C S+G + K+F+EM R+ + W ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 549 GLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPE 608
+G ++A+E FREM+F G K ++ +L C + EG ++ + R G+E
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR-LGLESN 123
Query: 609 MDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFL 648
+ + ++ + R G L+ + K+ +M N W + L
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSIL 162
Score = 37.4 bits (85), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+ ++++ S+N ++ Y+ G E+ + F M+ G EP TF +LS C + V+
Sbjct: 457 IKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEG 516
Query: 60 QLQASVLKN--GLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVT-WNSIVSIF 116
++++ G+ + ++ L GR G LDE + M K T W + +S
Sbjct: 517 WKYFDLMRSRYGIIPTIEHC-SCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSC 575
Query: 117 GKHGFVEDCMFLFCELVRSEVALTE----SSFVGVIHGLSNEQDLEFGEQIHGLVIKN 170
H +E E+ + + E ++++ +I+ SN E E+I L+ N
Sbjct: 576 KIHRDLE-----LAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNN 628
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 258 bits (660), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 171/581 (29%), Positives = 281/581 (48%), Gaps = 42/581 (7%)
Query: 77 VGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVED---CMFLFCELV 133
+ L+ LY G + F+ + + + WN ++S +G+ G + C LF ++
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--ML 145
Query: 134 RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIW 193
S + +F V+ D G +IH L +K GF +++ VA SL+++Y + +
Sbjct: 146 SSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVG 202
Query: 194 SAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
+A +F ++ +RD+ SWN +I +S N +AL L S + + T V ++++C
Sbjct: 203 NARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL----SNGLRAMDSVTVVSLLSACT 258
Query: 254 GLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNA 313
+ G +IH+ IK+ LE ++FV + L+D YA+ L F + ++++SWN+
Sbjct: 259 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNS 318
Query: 314 LILGYASKSSPTSIFLLIELLQLGY-RPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENY 372
+I Y P L + ++L +P+ T SLA L QL
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI-----SLASILSQL------------ 361
Query: 373 EYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLE 432
G + + G F+ + I AVV +Y + G + + + L
Sbjct: 362 ----GDIRACRSVQGFTLRKGWFLEDITIGNAVVV------MYAKLGLVDSARAVFNWLP 411
Query: 433 RPDIVSWNIVIAACAHNGDYKEVLELFKYMRA-ARIYPDNYTFVSLLSACSKLCNLALGS 491
D++SWN +I+ A NG E +E++ M I + T+VS+L ACS+ L G
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471
Query: 492 SLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLN 551
LHG + K + D FV L DMYGKCG + ++ +F ++ N + W LI+ G +
Sbjct: 472 KLHGRLLKNGLYL-DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFH 530
Query: 552 GFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDH 611
G ++A+ F+EM G KPD + + +L+AC H GLV EG FE M YG+ P + H
Sbjct: 531 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 590
Query: 612 YHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQ 652
Y C+VD+ R G L+ A K I +M P+A IW L C+
Sbjct: 591 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACR 631
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/592 (25%), Positives = 286/592 (48%), Gaps = 53/592 (8%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMF-LYMINRGFEPTQFTFGGLL-SCDSLNPVEG 58
+ +R+V ++N +IS Y R G + +R F L+M++ G P TF +L +C ++ ++G
Sbjct: 112 IQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV--IDG 169
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ LK G F D +V +L+ LY R+ + +F++MP + + +WN+++S + +
Sbjct: 170 NKIHCLALKFG-FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
G ++ + L L A+ + V ++ + D G IH IK+G + EL V
Sbjct: 229 SGNAKEALTLSNGL----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 179 ANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIV 238
+N L+++Y + + +K+F + +RD++SWN+II A +E +A+ L+ M + +
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI 344
Query: 239 FPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNA--LECDVFVGSALVDFYAKCDNLEGA 296
P+ T + + + + L + +S+ ++ LE D+ +G+A+V YAK ++ A
Sbjct: 345 QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKLGLVDSA 403
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL--GYRPNEFTFSHVL----R 350
F+ + N +++SWN +I GYA + + +++ N+ T+ VL +
Sbjct: 404 RAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ 463
Query: 351 SSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
+ Q ++LH +++ G +V+ SL Y K G + DAL+
Sbjct: 464 AGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS---------------- 507
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
L Q+ R + V WN +IA +G ++ + LFK M + PD
Sbjct: 508 ----------------LFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPD 551
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
+ TFV+LLSACS + G +++ I+ ++DMYG+ G + +++K
Sbjct: 552 HITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFI 611
Query: 531 NEMT-DRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLT 581
M+ + W AL+SA ++G L K +P+ V +L+
Sbjct: 612 KSMSLQPDASIWGALLSACRVHGNVD--LGKIASEHLFEVEPEHVGYHVLLS 661
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 231/496 (46%), Gaps = 40/496 (8%)
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
+L+ + +H ++ + + ++ LVN+Y + A F ++ RDV +WN +I
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 216 ALAESENFGKALELY-LRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALE 274
+ N + + + L M + P+ TF V+ +C + I G IH +K
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFM 182
Query: 275 CDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL 334
DV+V ++L+ Y++ + A + F E+ +++ SWNA+I GY
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYC--------------- 227
Query: 335 QLGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYA-KSGLISDAL 393
Q G T S+ LR+ + ++ L G ++ G + SY+ K GL S+
Sbjct: 228 QSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAG----DFNRGVTIHSYSIKHGLESELF 283
Query: 394 AFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK 453
+N + +Y G+ + K+ ++ D++SWN +I A N
Sbjct: 284 V-------------SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 454 EVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNML 513
+ LF+ MR +RI PD T +SL S S+L ++ S+ G + D + N +
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 514 IDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG-FKPD 572
+ MY K G + S+ +FN + + +VI+W +IS NGFA A+E + ME G +
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 573 RVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKII 632
+ ++VL AC G +R+GM+L R+ ++ G+ ++ + D+ + G L++A +
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 633 TTMPFPPNALIWRTFL 648
+P N++ W T +
Sbjct: 510 YQIP-RVNSVPWNTLI 524
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/602 (28%), Positives = 297/602 (49%), Gaps = 49/602 (8%)
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
G Q+ +G F + V A++G+Y + G D + +FE++ +V+WN+I+S F
Sbjct: 95 GCQIHGFSTTSG-FTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFD 153
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+ + + + + V ++ + + G Q+ V+K G + +L+
Sbjct: 154 DN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLV 210
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFG-KALELYLRMSVD 236
V NS + MY + A ++F ++ +D++SWN+++ L++ FG +A+ ++ M +
Sbjct: 211 VGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMRE 270
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V + +F VI +C + L + IH IK E + VG+ L+ Y+KC LE
Sbjct: 271 GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAV 330
Query: 297 HLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRS----S 352
F ++S +N+VSW +I ++K SIFL + G PNE TF ++ +
Sbjct: 331 KSVFHQMSERNVVSWTTMI--SSNKDDAVSIFLNMRF--DGVYPNEVTFVGLINAVKCNE 386
Query: 353 LAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
+ L++H L I+ G+ + V S +T YAK + DA
Sbjct: 387 QIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDA-------------------- 426
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
K + +I+SWN +I+ A NG E L++F AA P+ Y
Sbjct: 427 ------------KKAFEDITFREIISWNAMISGFAQNGFSHEALKMF-LSAAAETMPNEY 473
Query: 473 TFVSLLSACSKLCNLAL--GSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF S+L+A + ++++ G H + K ++S V + L+DMY K G+I S K+F
Sbjct: 474 TFGSVLNAIAFAEDISVKQGQRCHAHLLKLG-LNSCPVVSSALLDMYAKRGNIDESEKVF 532
Query: 531 NEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVR 590
NEM+ +N WT++ISA +G + + F +M PD V ++VLTAC G+V
Sbjct: 533 NEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVD 592
Query: 591 EGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+G E+F M Y +EP +HY C+VD+L R G LKEAE++++ +P P + ++ L
Sbjct: 593 KGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGS 652
Query: 651 CQ 652
C+
Sbjct: 653 CR 654
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 158/543 (29%), Positives = 270/543 (49%), Gaps = 56/543 (10%)
Query: 3 DRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVEGAQ 60
D +VVS+N+I+S + + AL + M + G FT+ LS S + G Q
Sbjct: 139 DPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQ 195
Query: 61 LQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHG 120
LQ++V+K GL +D VG + + +Y R G VF++M K +++WNS++S + G
Sbjct: 196 LQSTVVKTGLE-SDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG 254
Query: 121 -FVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVA 179
F + + +F +++R V L SF VI +E DL+ QIHGL IK G++ L V
Sbjct: 255 TFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 314
Query: 180 NSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDIVF 239
N L++ Y +C + + + +F + R+VVSW T+I S N A+ ++L M D V+
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVY 369
Query: 240 PNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLC 299
PN+ TFV +IN+ + G IH IK + VG++ + YAK + LE A
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 429
Query: 300 FSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAF---- 355
F +I+ + I+SWNA+I G+A + PNE+TF VL +++AF
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVL-NAIAFAEDI 488
Query: 356 ---QLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIA 412
Q + H ++++G + V +L+ YAK G I ++
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDES-------------------E 529
Query: 413 GIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNY 472
++N Q N+ V W +I+A + +GD++ V+ LF M + PD
Sbjct: 530 KVFNEMSQKNQFV-------------WTSIISAYSSHGDFETVMNLFHKMIKENVAPDLV 576
Query: 473 TFVSLLSACSKLCNLALGSSLHGLIKKTEII--SSDTFVCNMLIDMYGKCGSIGSSVKIF 530
TF+S+L+AC++ + G + ++ + + S + + C ++DM G+ G + + ++
Sbjct: 577 TFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSC--MVDMLGRAGRLKEAEELM 634
Query: 531 NEM 533
+E+
Sbjct: 635 SEV 637
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 240/502 (47%), Gaps = 54/502 (10%)
Query: 156 DLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIG 215
DL+ G QIHG +GF + V+N+++ MY + +A +F+++ DVVSWNTI+
Sbjct: 91 DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILS 150
Query: 216 ALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALEC 275
+++ AL +RM V + T+ ++ C G + +LG + + V+K LE
Sbjct: 151 GFDDNQ---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLES 207
Query: 276 DVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSS--PTSIFLLIEL 333
D+ VG++ + Y++ + GA F E+S K+++SWN+L+ G + + + ++ + ++
Sbjct: 208 DLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDM 267
Query: 334 LQLGYRPNEFTFSHVLRSSLAFQLL----QLHCLIIRMGYENYEYVLGSLMTSYAKSGLI 389
++ G + +F+ V+ + L Q+H L I+ GYE+ V LM+ Y+K G++
Sbjct: 268 MREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVL 327
Query: 390 SDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVK-LLSQLERPDIVSWNIVIAACAH 448
E VK + Q+ ++VSW +I++
Sbjct: 328 ---------------------------------EAVKSVFHQMSERNVVSWTTMISS--- 351
Query: 449 NGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTF 508
N D + + +F MR +YP+ TFV L++A + G +HGL KT +S +
Sbjct: 352 NKD--DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS- 408
Query: 509 VCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLG 568
V N I +Y K ++ + K F ++T R +I+W A+IS NGF+ AL+ F
Sbjct: 409 VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAET 468
Query: 569 FKPDRVALIAVLTACRHGG--LVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLK 626
P+ +VL A V++G + + G+ ++D+ + G++
Sbjct: 469 M-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK-LGLNSCPVVSSALLDMYAKRGNID 526
Query: 627 EAEKIITTMPFPPNALIWRTFL 648
E+EK+ M N +W + +
Sbjct: 527 ESEKVFNEMS-QKNQFVWTSII 547
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 191/355 (53%), Gaps = 13/355 (3%)
Query: 1 MPDRNVVSFNSIISAYSRCG-YVEDALRMFLYMINRGFEPTQFTFGGLLS--CDSLNPVE 57
M ++++S+NS++S S+ G + +A+ +F M+ G E +F +++ C +
Sbjct: 235 MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKL 294
Query: 58 GAQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q+ +K G + + VG L+ Y + G L+ V SVF M +++V+W +++S
Sbjct: 295 ARQIHGLCIKRG-YESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS--- 350
Query: 118 KHGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELL 177
+D + +F + V E +FVG+I+ + + ++ G +IHGL IK GF E
Sbjct: 351 --SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS 408
Query: 178 VANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVDI 237
V NS + +Y + + A+K F+D+ R+++SWN +I A++ +AL+++L + +
Sbjct: 409 VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAET 468
Query: 238 VFPNQTTFVYVINSCAGLQNSIL--GKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
+ PN+ TF V+N+ A ++ + G+ HA ++K L V SAL+D YAK N++
Sbjct: 469 M-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDE 527
Query: 296 AHLCFSEISNKNIVSWNALILGYASKSS-PTSIFLLIELLQLGYRPNEFTFSHVL 349
+ F+E+S KN W ++I Y+S T + L ++++ P+ TF VL
Sbjct: 528 SEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVL 582
Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 141/256 (55%), Gaps = 11/256 (4%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLSCDSLNPV--EG 58
M +RNVVS+ ++IS+ +DA+ +FL M G P + TF GL++ N EG
Sbjct: 337 MSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 391
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
++ +K G F ++ VG + + LY + L++ FED+ + +++WN+++S F +
Sbjct: 392 LKIHGLCIKTG-FVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQ 450
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEF--GEQIHGLVIKNGFDYEL 176
+GF + + +F +E E +F V++ ++ +D+ G++ H ++K G +
Sbjct: 451 NGFSHEALKMFLSAA-AETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCP 509
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
+V+++L++MY + I +EK+F ++ ++ W +II A + +F + L+ +M +
Sbjct: 510 VVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKE 569
Query: 237 IVFPNQTTFVYVINSC 252
V P+ TF+ V+ +C
Sbjct: 570 NVAPDLVTFLSVLTAC 585
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 194/414 (46%), Gaps = 47/414 (11%)
Query: 241 NQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCF 300
++ T + +C G + G IH + V V +A++ Y K + A F
Sbjct: 77 DEVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 134
Query: 301 SEISNKNIVSWNALILGYASKSSPTSIFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL 360
+ + ++VSWN ++ G+ + ++ ++ + G + FT+S ++L+F
Sbjct: 135 ENLVDPDVVSWNTILSGF--DDNQIALNFVVRMKSAGVVFDAFTYS----TALSF----- 183
Query: 361 HCLIIRMGYENYEYVLG-SLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTG 419
C+ G E + +LG L ++ K+GL SD +V N +Y+R+G
Sbjct: 184 -CV----GSEGF--LLGLQLQSTVVKTGLESD-------------LVVGNSFITMYSRSG 223
Query: 420 QYNETVKLLSQLERPDIVSWNIVIAACAHNGDYK-EVLELFKYMRAARIYPDNYTFVSLL 478
+ ++ ++ D++SWN +++ + G + E + +F+ M + D+ +F S++
Sbjct: 224 SFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVI 283
Query: 479 SACSKLCNLALGSSLHGL-IKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRN 537
+ C +L L +HGL IK+ S V N+L+ Y KCG + + +F++M++RN
Sbjct: 284 TTCCHETDLKLARQIHGLCIKRG--YESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERN 341
Query: 538 VITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFE 597
V++WT +IS+ A+ F M F G P+ V + ++ A + ++EG+++
Sbjct: 342 VVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHG 396
Query: 598 R-MNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEG 650
+ + EP + + + L ++ L++A+K + F + W + G
Sbjct: 397 LCIKTGFVSEPSVG--NSFITLYAKFEALEDAKKAFEDITFRE-IISWNAMISG 447
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 256 bits (655), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 161/501 (32%), Positives = 258/501 (51%), Gaps = 11/501 (2%)
Query: 161 EQIHGLVIKNGFDYELLVANSLVNM--YFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALA 218
+Q HG +I+ G + A+ L M A + A K+F ++ + +WNT+I A A
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 219 ESENFGKALELYLRM-SVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDV 277
+ ++ +L M S +PN+ TF ++I + A + + LG+S+H +K+A+ DV
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166
Query: 278 FVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELLQL- 336
FV ++L+ Y C +L+ A F+ I K++VSWN++I G+ K SP L + ++
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 337 GYRPNEFTFSHVLRSSLAFQLLQLH---CLIIRMGYENYEYVLGSLMTS-YAKSGLISDA 392
+ + T VL + + L+ C I N L + M Y K G I DA
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 393 LAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDY 452
A+ V ++ G Y + Y ++L+ + + DIV+WN +I+A NG
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDG-YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKP 345
Query: 453 KEVLELFKYMRAAR-IYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCN 511
E L +F ++ + + + T VS LSAC+++ L LG +H IKK I + V +
Sbjct: 346 NEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFHVTS 404
Query: 512 MLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKP 571
LI MY KCG + S ++FN + R+V W+A+I L ++G A++ F +M+ KP
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 572 DRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCVVDLLVRYGHLKEAEKI 631
+ V V AC H GLV E LF +M +YG+ PE HY C+VD+L R G+L++A K
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524
Query: 632 ITTMPFPPNALIWRTFLEGCQ 652
I MP PP+ +W L C+
Sbjct: 525 IEAMPIPPSTSVWGALLGACK 545
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/533 (22%), Positives = 251/533 (47%), Gaps = 43/533 (8%)
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYG--RHGCLDEVVSVFEDMPRKSLVTWNSIVSIFG 117
Q +++ G F +D + + L + L+ VF+++P+ + WN+++ +
Sbjct: 48 QTHGHMIRTGTF-SDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 118 KHGFVEDCMFLFCELV-RSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYEL 176
++ F ++V S+ + +F +I + L G+ +HG+ +K+ ++
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166
Query: 177 LVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSVD 236
VANSL++ YF C + SA K+F ++ +DVVSWN++I + + KALEL+ +M +
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 237 IVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEGA 296
V + T V V+++CA ++N G+ + + + +N + ++ + +A++D Y KC ++E A
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 297 HLCFSEISNKNIVSWNALILGYAS-----------KSSPTSIFL----LIELLQLGYRPN 341
F + K+ V+W ++ GYA S P + LI + +PN
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 342 EFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDAL---AFVTA 398
E L+ H L ++ + + L S +++ A+ G + +++
Sbjct: 347 E-------------ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393
Query: 399 LNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLEL 458
I + + +Y++ G ++ ++ + +E+ D+ W+ +I A +G E +++
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDM 453
Query: 459 FKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSL-HGLIKKTEIISSDT-FVCNMLIDM 516
F M+ A + P+ TF ++ ACS + SL H + I+ + + C ++D+
Sbjct: 454 FYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC--IVDV 511
Query: 517 YGKCGSIGSSVKIFNEMT-DRNVITWTALISALGLNG---FAQRALEKFREME 565
G+ G + +VK M + W AL+ A ++ A+ A + E+E
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELE 564
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 137/286 (47%), Gaps = 33/286 (11%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLLS-CDSLNPVEGA 59
+ +++VVS+NS+I+ + + G + AL +F M + + + T G+LS C + +E
Sbjct: 192 IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 251
Query: 60 QLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFE-------------------- 99
+ S ++ + + A+L +Y + G +++ +F+
Sbjct: 252 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 311
Query: 100 -----------DMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCEL-VRSEVALTESSFVGV 147
MP+K +V WN+++S + ++G + + +F EL ++ + L + + V
Sbjct: 312 EDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVST 371
Query: 148 IHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEIRDV 207
+ + LE G IH + K+G V ++L++MY +C + + ++F VE RDV
Sbjct: 372 LSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV 431
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCA 253
W+ +IG LA +A++++ +M V PN TF V +C+
Sbjct: 432 FVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477
>sp|Q9LRV2|PP256_ARATH Pentatricopeptide repeat-containing protein At3g26540
OS=Arabidopsis thaliana GN=PCMP-A5 PE=2 SV=1
Length = 700
Score = 255 bits (652), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 159/583 (27%), Positives = 280/583 (48%), Gaps = 15/583 (2%)
Query: 85 YGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGKHGFVEDCMFLFCELVRSEVALTESSF 144
YG+ GC+D+ +FE+MP + +WN++++ ++G ++ +F + R V TE+SF
Sbjct: 106 YGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSF 165
Query: 145 VGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLVANSLVNMYFQCAGIWSAEKMFKDVEI 204
GV+ DL Q+H V+K G+ + + S+V++Y +C + A ++F ++
Sbjct: 166 AGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVN 225
Query: 205 RDVVSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSI 264
VSWN I+ E +A+ ++ +M V P T V+ +C+ +GK I
Sbjct: 226 PSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVI 285
Query: 265 HAKVIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSP 324
HA +K ++ D V +++ D Y KCD LE A F + +K++ SW + + GYA
Sbjct: 286 HAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT 345
Query: 325 TSIFLLIELLQ----LGYRPNEFTFSHVLRSSLAFQLLQLHCLIIRMGYENYEYV----L 376
L +L+ + + + H A L L +R EN + V +
Sbjct: 346 REARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTL----MRQEIENIDNVTLVWI 401
Query: 377 GSLMTSYAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQL-ERPD 435
++ + + + A F+ V+ AN + +Y + G Q+ E D
Sbjct: 402 LNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRD 461
Query: 436 IVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHG 495
VSWN ++ A G ++ L F+ M+ P YT +LL+ C+ + L LG ++HG
Sbjct: 462 EVSWNALLTGVARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHG 520
Query: 496 LIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIFNEMTDRNVITWTALISALGLNGFAQ 555
+ + + D + ++DMY KC ++++F E R++I W ++I NG ++
Sbjct: 521 FLIR-DGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSK 579
Query: 556 RALEKFREMEFLGFKPDRVALIAVLTACRHGGLVREGMELFERMNRSYGVEPEMDHYHCV 615
E F +E G KPD V + +L AC G V G + F M+ Y + P+++HY C+
Sbjct: 580 EVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCM 639
Query: 616 VDLLVRYGHLKEAEKIITTMPFPPNALIWRTFLEGCQRCRIAK 658
++L +YG L + E+ + MPF P + + CQR R +K
Sbjct: 640 IELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSK 682
Score = 199 bits (505), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 138/561 (24%), Positives = 264/561 (47%), Gaps = 71/561 (12%)
Query: 1 MPDRNVVSFNSIISAYSRCGYVEDALRMFLYMINRGFEPTQFTFGGLL-SCDSLNPVEG- 58
MP+R+ S+N++I+A ++ G ++ RMF M G T+ +F G+L SC + +
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLL 181
Query: 59 AQLQASVLKNGLFCADAFVGTALLGLYGRHGCLDEVVSVFEDMPRKSLVTWNSIVSIFGK 118
QL +V+K G + + + T+++ +YG+ + + VF+++ S V+WN IV + +
Sbjct: 182 RQLHCAVVKYG-YSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLE 240
Query: 119 HGFVEDCMFLFCELVRSEVALTESSFVGVIHGLSNEQDLEFGEQIHGLVIKNGFDYELLV 178
GF ++ + +F +++ V + V+ S LE G+ IH + +K + +V
Sbjct: 241 MGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVV 300
Query: 179 ANSLVNMYFQCAGIWSAEKMF-----KDVEI--------------------------RDV 207
+ S+ +MY +C + SA ++F KD++ R++
Sbjct: 301 STSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNI 360
Query: 208 VSWNTIIGALAESENFGKALELYLRMSVDIVFPNQTTFVYVINSCAGLQNSILGKSIHAK 267
VSWN ++G + + +AL+ M +I + T V+++N C+G+ + +GK H
Sbjct: 361 VSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGF 420
Query: 268 VIKNALECDVFVGSALVDFYAKCDNLEGAHLCFSEISN-KNIVSWNALILGYASKSSPTS 326
+ ++ + +V V +AL+D Y KC L+ A++ F ++S ++ VSWNAL+ G A
Sbjct: 421 IYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQ 480
Query: 327 IFLLIELLQLGYRPNEFTFSHVLRSSLAFQLLQL----HCLIIRMGYENYEYVLGSLMTS 382
E +Q+ +P+++T + +L L L H +IR GY+ + G+++
Sbjct: 481 ALSFFEGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDM 540
Query: 383 YAKSGLISDALAFVTALNIPRAVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIV 442
Y+K ++ +++ + D++ WN +
Sbjct: 541 YSKCRC--------------------------------FDYAIEVFKEAATRDLILWNSI 568
Query: 443 IAACAHNGDYKEVLELFKYMRAARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEI 502
I C NG KEV ELF + + PD+ TF+ +L AC + ++ LG +
Sbjct: 569 IRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYH 628
Query: 503 ISSDTFVCNMLIDMYGKCGSI 523
IS + +I++Y K G +
Sbjct: 629 ISPQVEHYDCMIELYCKYGCL 649
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 214/437 (48%), Gaps = 20/437 (4%)
Query: 176 LLVANSLVNMYFQCAGIWSAEKMFKDVEIRDVVSWNTIIGALAESENFGKALELYLRMSV 235
+ + N + Y +C + A ++F+++ RD SWN +I A A++ + ++ RM+
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 236 DIVFPNQTTFVYVINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYAKCDNLEG 295
D V +T+F V+ SC + + L + +H V+K +V + +++VD Y KC +
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD 215
Query: 296 AHLCFSEISNKNIVSWNALILGYASKS-SPTSIFLLIELLQLGYRPNEFTFSHVLRS--- 351
A F EI N + VSWN ++ Y + ++ + ++L+L RP T S V+ +
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR 275
Query: 352 SLAFQLLQ-LHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPRAVVPANI 410
SLA ++ + +H + +++ V S+ Y K + A +
Sbjct: 276 SLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSA 335
Query: 411 IAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMRAARIYPD 470
++G Y +G E +L + +IVSWN ++ H ++ E L+ MR D
Sbjct: 336 MSG-YAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENID 394
Query: 471 NYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSIGSSVKIF 530
N T V +L+ CS + ++ +G HG I + ++ V N L+DMYGKCG++ S+ F
Sbjct: 395 NVTLVWILNVCSGISDVQMGKQAHGFIYR-HGYDTNVIVANALLDMYGKCGTLQSANIWF 453
Query: 531 NEMTD-RNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDRVALIAVLTACR----- 584
+M++ R+ ++W AL++ + G +++AL F M+ + KP + L +L C
Sbjct: 454 RQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANIPAL 512
Query: 585 ------HGGLVREGMEL 595
HG L+R+G ++
Sbjct: 513 NLGKAIHGFLIRDGYKI 529
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 169/380 (44%), Gaps = 51/380 (13%)
Query: 234 SVDIVFPNQTTFVY-----VINSCAGLQNSILGKSIHAKVIKNALECDVFVGSALVDFYA 288
+V ++F + Y + SC+ + + + + ++ + +F+ + ++ Y
Sbjct: 48 AVSVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYG 107
Query: 289 KCDNLEGAHLCFSEISNKNIVSWNALILGYASKSSPTSIFLLIELL-QLGYRPNEFTFSH 347
KC ++ A F E+ ++ SWNA+I A +F + + + G R E +F+
Sbjct: 108 KCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAG 167
Query: 348 VLRSS---LAFQLL-QLHCLIIRMGYENYEYVLGSLMTSYAKSGLISDALAFVTALNIPR 403
VL+S L +LL QLHC +++ GY + S++ Y K ++SDA
Sbjct: 168 VLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDAR---------- 217
Query: 404 AVVPANIIAGIYNRTGQYNETVKLLSQLERPDIVSWNIVIAACAHNGDYKEVLELFKYMR 463
++ ++ P VSWN+++ G E + +F M
Sbjct: 218 ----------------------RVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKML 255
Query: 464 AARIYPDNYTFVSLLSACSKLCNLALGSSLHGLIKKTEIISSDTFVCNMLIDMYGKCGSI 523
+ P N+T S++ ACS+ L +G +H + K ++ +DT V + DMY KC +
Sbjct: 256 ELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVV-ADTVVSTSVFDMYVKCDRL 314
Query: 524 GSSVKIFNEMTDRNVITWTALISALGLNGFAQRALEKFREMEFLGFKPDR--VALIAVLT 581
S+ ++F++ +++ +WT+ +S ++G + A E F M P+R V+ A+L
Sbjct: 315 ESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLM------PERNIVSWNAMLG 368
Query: 582 ACRHGGLVREGMELFERMNR 601
H E ++ M +
Sbjct: 369 GYVHAHEWDEALDFLTLMRQ 388
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 237,076,415
Number of Sequences: 539616
Number of extensions: 9657810
Number of successful extensions: 38298
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 27373
Number of HSP's gapped (non-prelim): 3107
length of query: 667
length of database: 191,569,459
effective HSP length: 124
effective length of query: 543
effective length of database: 124,657,075
effective search space: 67688791725
effective search space used: 67688791725
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)