Query 005970
Match_columns 667
No_of_seqs 467 out of 2916
Neff 7.6
Searched_HMMs 46136
Date Thu Mar 28 16:28:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005970.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005970hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd08603 GDPD_SHV3_repeat_1 Gly 100.0 2.7E-60 5.8E-65 489.7 29.2 298 92-390 1-298 (299)
2 cd08571 GDPD_SHV3_plant Glycer 100.0 3.4E-50 7.4E-55 422.2 25.8 287 92-391 1-302 (302)
3 cd08602 GDPD_ScGlpQ1_like Glyc 100.0 1.1E-48 2.5E-53 412.0 28.0 284 92-385 1-309 (309)
4 PRK11143 glpQ glycerophosphodi 100.0 3.7E-47 8.1E-52 406.0 28.1 291 89-394 24-353 (355)
5 cd08604 GDPD_SHV3_repeat_2 Gly 100.0 7E-47 1.5E-51 397.1 26.6 280 92-391 1-300 (300)
6 cd08600 GDPD_EcGlpQ_like Glyce 100.0 7.5E-47 1.6E-51 399.7 26.8 278 92-386 1-318 (318)
7 cd08560 GDPD_EcGlpQ_like_1 Gly 100.0 2.2E-46 4.8E-51 398.4 27.4 291 90-394 15-356 (356)
8 cd08603 GDPD_SHV3_repeat_1 Gly 100.0 1.3E-45 2.8E-50 380.7 25.0 240 408-667 1-260 (299)
9 cd08604 GDPD_SHV3_repeat_2 Gly 100.0 2.5E-45 5.4E-50 385.3 25.5 258 408-666 1-261 (300)
10 cd08571 GDPD_SHV3_plant Glycer 100.0 5.7E-45 1.2E-49 382.7 24.4 254 408-666 1-262 (302)
11 cd08559 GDPD_periplasmic_GlpQ_ 100.0 6.6E-45 1.4E-49 382.6 24.9 274 92-385 1-296 (296)
12 cd08602 GDPD_ScGlpQ1_like Glyc 100.0 1.2E-43 2.5E-48 374.0 24.7 252 408-666 1-277 (309)
13 cd08580 GDPD_Rv2277c_like Glyc 100.0 2.6E-44 5.6E-49 369.3 18.8 244 92-388 1-263 (263)
14 cd08610 GDPD_GDE6 Glycerophosp 100.0 4.4E-43 9.4E-48 368.3 21.7 252 84-395 15-285 (316)
15 cd08560 GDPD_EcGlpQ_like_1 Gly 100.0 1.1E-42 2.4E-47 370.1 23.9 258 404-666 13-302 (356)
16 cd08601 GDPD_SaGlpQ_like Glyce 100.0 1.4E-42 3.1E-47 358.2 22.6 239 93-392 2-255 (256)
17 cd08574 GDPD_GDE_2_3_6 Glycero 100.0 1.9E-42 4.2E-47 355.7 23.0 232 91-383 1-251 (252)
18 cd08600 GDPD_EcGlpQ_like Glyce 100.0 2E-42 4.3E-47 366.0 23.3 251 408-667 1-288 (318)
19 cd08559 GDPD_periplasmic_GlpQ_ 100.0 2.3E-42 5E-47 363.3 22.8 248 408-666 1-267 (296)
20 cd08609 GDPD_GDE3 Glycerophosp 100.0 3.1E-42 6.7E-47 362.1 22.0 244 91-396 26-286 (315)
21 PRK09454 ugpQ cytoplasmic glyc 100.0 6.1E-42 1.3E-46 351.8 23.0 231 91-391 7-245 (249)
22 cd08608 GDPD_GDE2 Glycerophosp 100.0 3.1E-42 6.8E-47 365.5 21.3 242 91-394 1-262 (351)
23 cd08612 GDPD_GDE4 Glycerophosp 100.0 9.1E-42 2E-46 359.4 23.0 255 88-392 23-298 (300)
24 cd08581 GDPD_like_1 Glyceropho 100.0 1.1E-41 2.3E-46 345.3 21.1 221 94-385 1-229 (229)
25 cd08568 GDPD_TmGDE_like Glycer 100.0 3.1E-41 6.8E-46 341.7 19.8 202 409-666 1-205 (226)
26 cd08565 GDPD_pAtGDE_like Glyce 100.0 7.1E-41 1.5E-45 340.5 21.5 228 94-388 1-234 (235)
27 cd08562 GDPD_EcUgpQ_like Glyce 100.0 1.4E-40 3E-45 337.7 23.4 222 94-385 1-229 (229)
28 cd08575 GDPD_GDE4_like Glycero 100.0 8.6E-41 1.9E-45 345.9 21.8 245 92-388 1-264 (264)
29 PRK11143 glpQ glycerophosphodi 100.0 1.4E-40 3.1E-45 355.3 23.8 256 402-666 21-314 (355)
30 cd08574 GDPD_GDE_2_3_6 Glycero 100.0 6E-41 1.3E-45 344.6 19.5 226 407-666 1-234 (252)
31 cd08573 GDPD_GDE1 Glycerophosp 100.0 1.9E-40 4.1E-45 341.9 22.7 215 410-666 1-239 (258)
32 cd08580 GDPD_Rv2277c_like Glyc 100.0 2E-41 4.3E-46 347.9 14.5 217 408-666 1-241 (263)
33 cd08568 GDPD_TmGDE_like Glycer 100.0 3.9E-40 8.5E-45 333.7 23.2 220 93-387 1-225 (226)
34 cd08582 GDPD_like_2 Glyceropho 100.0 4.5E-40 9.8E-45 334.9 23.7 225 94-386 1-232 (233)
35 PRK09454 ugpQ cytoplasmic glyc 100.0 3.5E-40 7.7E-45 338.7 23.0 212 406-666 6-220 (249)
36 cd08601 GDPD_SaGlpQ_like Glyce 100.0 1.9E-40 4.1E-45 342.4 20.9 222 409-666 2-229 (256)
37 cd08581 GDPD_like_1 Glyceropho 100.0 2.5E-40 5.3E-45 335.3 20.9 209 410-666 1-210 (229)
38 cd08564 GDPD_GsGDE_like Glycer 100.0 3.8E-40 8.3E-45 341.6 22.4 249 90-392 2-264 (265)
39 cd08563 GDPD_TtGDE_like Glycer 100.0 7.9E-40 1.7E-44 332.5 23.8 224 92-385 1-230 (230)
40 cd08612 GDPD_GDE4 Glycerophosp 100.0 4.5E-40 9.8E-45 346.6 22.4 227 403-666 22-272 (300)
41 cd08579 GDPD_memb_like Glycero 100.0 5.8E-40 1.3E-44 331.2 20.5 215 94-385 1-220 (220)
42 cd08562 GDPD_EcUgpQ_like Glyce 100.0 1.3E-39 2.7E-44 330.6 21.3 209 410-666 1-210 (229)
43 cd08567 GDPD_SpGDE_like Glycer 100.0 2.7E-39 6E-44 335.0 23.4 242 93-387 2-263 (263)
44 cd08573 GDPD_GDE1 Glycerophosp 100.0 3.2E-39 7E-44 332.8 23.6 231 94-384 1-257 (258)
45 cd08572 GDPD_GDE5_like Glycero 100.0 3.5E-39 7.5E-44 338.2 23.7 253 93-385 1-293 (293)
46 cd08565 GDPD_pAtGDE_like Glyce 100.0 8.2E-40 1.8E-44 332.8 18.2 209 410-666 1-212 (235)
47 cd08561 GDPD_cytoplasmic_ScUgp 100.0 2.4E-39 5.1E-44 332.8 20.6 240 94-391 1-248 (249)
48 cd08579 GDPD_memb_like Glycero 100.0 1.2E-39 2.6E-44 328.9 17.8 200 410-666 1-201 (220)
49 cd08570 GDPD_YPL206cp_fungi Gl 100.0 4.4E-39 9.6E-44 327.7 21.8 219 94-385 1-234 (234)
50 cd08607 GDPD_GDE5 Glycerophosp 100.0 7.5E-39 1.6E-43 336.5 23.6 252 93-385 1-290 (290)
51 cd08607 GDPD_GDE5 Glycerophosp 100.0 4E-39 8.7E-44 338.5 21.2 235 409-665 1-270 (290)
52 cd08563 GDPD_TtGDE_like Glycer 100.0 6.4E-39 1.4E-43 325.8 21.9 210 408-666 1-211 (230)
53 cd08606 GDPD_YPL110cp_fungi Gl 100.0 1E-38 2.2E-43 334.7 22.7 247 92-392 2-284 (286)
54 cd08582 GDPD_like_2 Glyceropho 100.0 1.1E-38 2.4E-43 324.6 21.9 210 410-666 1-212 (233)
55 cd08610 GDPD_GDE6 Glycerophosp 100.0 3.4E-39 7.3E-44 338.9 18.4 230 403-666 18-256 (316)
56 cd08572 GDPD_GDE5_like Glycero 100.0 8.6E-39 1.9E-43 335.2 20.6 240 409-665 1-273 (293)
57 cd08566 GDPD_AtGDE_like Glycer 100.0 2.1E-38 4.5E-43 323.6 22.2 232 93-385 1-240 (240)
58 cd08585 GDPD_like_3 Glyceropho 100.0 5.3E-39 1.2E-43 326.9 17.7 207 408-666 4-220 (237)
59 cd08575 GDPD_GDE4_like Glycero 100.0 1.1E-38 2.3E-43 330.3 20.1 225 408-666 1-242 (264)
60 cd08608 GDPD_GDE2 Glycerophosp 100.0 9.7E-39 2.1E-43 338.9 19.6 226 407-666 1-234 (351)
61 cd08605 GDPD_GDE5_like_1_plant 100.0 2.6E-38 5.6E-43 330.9 20.9 232 410-665 2-262 (282)
62 cd08606 GDPD_YPL110cp_fungi Gl 100.0 3.4E-38 7.4E-43 330.7 21.5 230 408-665 2-257 (286)
63 cd08609 GDPD_GDE3 Glycerophosp 100.0 2.2E-38 4.7E-43 333.0 19.8 224 406-666 25-256 (315)
64 cd08570 GDPD_YPL206cp_fungi Gl 100.0 1.1E-37 2.3E-42 317.5 22.6 208 410-666 1-215 (234)
65 cd08564 GDPD_GsGDE_like Glycer 100.0 4E-38 8.8E-43 326.5 19.6 214 406-662 2-230 (265)
66 cd08567 GDPD_SpGDE_like Glycer 100.0 9.1E-38 2E-42 323.6 21.5 233 409-666 2-242 (263)
67 cd08605 GDPD_GDE5_like_1_plant 100.0 1.2E-37 2.5E-42 326.0 22.5 246 94-385 2-282 (282)
68 cd08566 GDPD_AtGDE_like Glycer 100.0 1.4E-37 3.1E-42 317.4 22.2 204 409-665 1-207 (240)
69 cd08613 GDPD_GDE4_like_1 Glyce 100.0 5.9E-37 1.3E-41 316.9 23.7 258 83-388 15-307 (309)
70 cd08561 GDPD_cytoplasmic_ScUgp 100.0 3.8E-37 8.2E-42 316.5 17.6 217 410-666 1-223 (249)
71 cd08585 GDPD_like_3 Glyceropho 100.0 2.4E-36 5.1E-41 307.5 21.4 225 92-382 4-236 (237)
72 COG0584 UgpQ Glycerophosphoryl 100.0 4.9E-36 1.1E-40 309.7 21.4 242 91-393 5-255 (257)
73 cd08583 PI-PLCc_GDPD_SF_unchar 100.0 4.4E-36 9.6E-41 306.3 20.5 225 94-386 1-236 (237)
74 cd08583 PI-PLCc_GDPD_SF_unchar 100.0 2.1E-35 4.6E-40 301.2 20.9 211 410-666 1-216 (237)
75 COG0584 UgpQ Glycerophosphoryl 100.0 1.5E-34 3.2E-39 298.7 20.8 219 407-666 5-228 (257)
76 PF03009 GDPD: Glycerophosphor 100.0 2.2E-34 4.7E-39 295.1 15.5 239 97-387 1-256 (256)
77 cd08613 GDPD_GDE4_like_1 Glyce 100.0 9.2E-34 2E-38 293.2 19.5 216 403-665 19-284 (309)
78 PF03009 GDPD: Glycerophosphor 100.0 3.4E-33 7.3E-38 286.3 16.9 220 413-666 1-233 (256)
79 cd08556 GDPD Glycerophosphodie 100.0 1.3E-30 2.9E-35 255.9 20.5 185 94-384 1-189 (189)
80 cd08556 GDPD Glycerophosphodie 100.0 7.4E-30 1.6E-34 250.6 16.8 170 410-666 1-171 (189)
81 cd08555 PI-PLCc_GDPD_SF Cataly 100.0 1.5E-29 3.2E-34 247.1 16.6 165 94-384 1-179 (179)
82 cd08555 PI-PLCc_GDPD_SF Cataly 100.0 5.4E-28 1.2E-32 236.1 16.1 151 410-665 1-159 (179)
83 cd08578 GDPD_NUC-2_fungi Putat 99.9 1.2E-25 2.6E-30 234.1 18.5 217 424-664 17-276 (300)
84 KOG2258 Glycerophosphoryl dies 99.9 1.2E-26 2.6E-31 246.7 6.1 284 334-666 2-290 (341)
85 KOG2258 Glycerophosphoryl dies 99.9 1.8E-23 3.9E-28 222.5 11.9 274 72-396 51-333 (341)
86 cd08578 GDPD_NUC-2_fungi Putat 99.9 3E-22 6.6E-27 208.6 18.1 231 108-384 17-296 (300)
87 cd08584 PI-PLCc_GDPD_SF_unchar 99.8 2.5E-19 5.4E-24 173.0 19.0 187 94-388 1-192 (192)
88 cd08584 PI-PLCc_GDPD_SF_unchar 99.8 1.3E-19 2.8E-24 175.0 14.7 152 410-660 1-154 (192)
89 cd08576 GDPD_like_SMaseD_PLD G 99.2 3.6E-10 7.8E-15 115.0 13.9 53 328-395 192-249 (265)
90 cd08577 PI-PLCc_GDPD_SF_unchar 99.2 2E-10 4.3E-15 116.0 11.8 93 112-250 15-108 (228)
91 cd08577 PI-PLCc_GDPD_SF_unchar 99.1 3.9E-10 8.5E-15 113.8 9.2 95 428-575 15-109 (228)
92 cd08592 PI-PLCc_gamma Catalyti 98.2 1.3E-06 2.8E-11 87.2 4.7 53 409-461 13-68 (229)
93 cd08576 GDPD_like_SMaseD_PLD G 98.1 3.3E-05 7.2E-10 79.0 13.4 43 410-459 2-45 (265)
94 PF13653 GDPD_2: Glycerophosph 98.1 1.2E-06 2.6E-11 58.6 1.2 30 342-386 1-30 (30)
95 cd08627 PI-PLCc_gamma1 Catalyt 98.1 3.9E-06 8.4E-11 83.5 4.7 44 418-461 25-68 (229)
96 cd08592 PI-PLCc_gamma Catalyti 98.0 7.8E-06 1.7E-10 81.7 5.1 51 94-146 14-67 (229)
97 KOG2421 Predicted starch-bindi 97.8 3.2E-06 6.9E-11 92.7 -0.8 59 406-464 323-388 (417)
98 cd08627 PI-PLCc_gamma1 Catalyt 97.8 2.5E-05 5.5E-10 77.8 5.2 43 101-145 24-66 (229)
99 KOG2421 Predicted starch-bindi 97.6 6.3E-06 1.4E-10 90.4 -2.0 59 90-150 323-388 (417)
100 cd08597 PI-PLCc_PRIP_metazoa C 97.4 0.00013 2.8E-09 74.6 3.9 43 419-461 26-68 (260)
101 smart00148 PLCXc Phospholipase 97.1 0.00065 1.4E-08 63.2 4.6 43 417-459 23-65 (135)
102 cd08597 PI-PLCc_PRIP_metazoa C 96.9 0.00087 1.9E-08 68.6 4.6 41 103-145 26-66 (260)
103 smart00148 PLCXc Phospholipase 96.6 0.0027 5.9E-08 59.0 4.8 43 101-145 23-65 (135)
104 cd08594 PI-PLCc_eta Catalytic 95.7 0.012 2.6E-07 58.9 4.3 42 419-460 26-67 (227)
105 cd08633 PI-PLCc_eta2 Catalytic 95.4 0.017 3.7E-07 58.7 4.3 43 419-461 26-68 (254)
106 cd08599 PI-PLCc_plant Catalyti 95.4 0.025 5.4E-07 57.0 5.3 53 407-459 11-66 (228)
107 cd08558 PI-PLCc_eukaryota Cata 95.3 0.021 4.6E-07 57.3 4.6 41 419-459 26-66 (226)
108 cd08595 PI-PLCc_zeta Catalytic 95.3 0.016 3.4E-07 59.2 3.6 42 419-460 26-67 (257)
109 cd08631 PI-PLCc_delta4 Catalyt 95.2 0.018 3.8E-07 58.9 3.8 42 420-461 27-68 (258)
110 cd08632 PI-PLCc_eta1 Catalytic 95.2 0.021 4.6E-07 57.9 4.3 42 420-461 27-68 (253)
111 cd08596 PI-PLCc_epsilon Cataly 95.1 0.023 5E-07 57.9 4.4 43 419-461 26-68 (254)
112 cd08630 PI-PLCc_delta3 Catalyt 95.1 0.019 4E-07 58.8 3.7 42 420-461 27-68 (258)
113 cd08628 PI-PLCc_gamma2 Catalyt 95.1 0.021 4.5E-07 58.3 3.9 41 420-460 27-67 (254)
114 cd08629 PI-PLCc_delta1 Catalyt 94.9 0.029 6.3E-07 57.3 4.3 43 419-461 26-68 (258)
115 cd08598 PI-PLC1c_yeast Catalyt 94.8 0.032 6.9E-07 56.2 4.4 42 419-460 26-67 (231)
116 cd08593 PI-PLCc_delta Catalyti 94.7 0.032 6.9E-07 57.2 4.2 43 419-461 26-68 (257)
117 cd08626 PI-PLCc_beta4 Catalyti 94.6 0.033 7.2E-07 56.9 4.1 43 419-461 26-70 (257)
118 cd08594 PI-PLCc_eta Catalytic 94.4 0.05 1.1E-06 54.6 4.6 42 102-145 25-66 (227)
119 cd08623 PI-PLCc_beta1 Catalyti 94.3 0.045 9.8E-07 56.0 4.2 42 420-461 27-70 (258)
120 cd08624 PI-PLCc_beta2 Catalyti 94.3 0.045 9.7E-07 56.1 4.1 43 419-461 26-70 (261)
121 cd08591 PI-PLCc_beta Catalytic 93.9 0.061 1.3E-06 55.0 4.1 43 419-461 26-70 (257)
122 cd08633 PI-PLCc_eta2 Catalytic 93.7 0.083 1.8E-06 53.8 4.7 42 102-145 25-66 (254)
123 cd08625 PI-PLCc_beta3 Catalyti 93.6 0.072 1.6E-06 54.7 4.1 43 419-461 26-70 (258)
124 cd08558 PI-PLCc_eukaryota Cata 93.6 0.098 2.1E-06 52.6 4.9 42 102-145 25-66 (226)
125 cd08599 PI-PLCc_plant Catalyti 93.5 0.11 2.4E-06 52.4 5.0 51 93-145 13-66 (228)
126 cd08595 PI-PLCc_zeta Catalytic 93.4 0.097 2.1E-06 53.6 4.5 42 102-145 25-66 (257)
127 cd08596 PI-PLCc_epsilon Cataly 93.3 0.11 2.3E-06 53.2 4.7 42 102-145 25-66 (254)
128 cd08632 PI-PLCc_eta1 Catalytic 93.3 0.11 2.3E-06 53.0 4.6 41 103-145 26-66 (253)
129 cd08631 PI-PLCc_delta4 Catalyt 93.2 0.11 2.3E-06 53.3 4.6 41 103-145 26-66 (258)
130 cd08630 PI-PLCc_delta3 Catalyt 93.2 0.11 2.3E-06 53.3 4.5 41 103-145 26-66 (258)
131 cd08598 PI-PLC1c_yeast Catalyt 92.9 0.14 3E-06 51.8 4.7 42 102-145 25-66 (231)
132 cd08629 PI-PLCc_delta1 Catalyt 92.9 0.13 2.9E-06 52.6 4.6 41 103-145 26-66 (258)
133 cd08628 PI-PLCc_gamma2 Catalyt 92.8 0.13 2.8E-06 52.6 4.5 41 103-145 26-66 (254)
134 cd08593 PI-PLCc_delta Catalyti 92.7 0.14 3E-06 52.6 4.5 41 103-145 26-66 (257)
135 KOG1264 Phospholipase C [Lipid 92.5 0.085 1.9E-06 60.5 2.9 42 419-460 333-374 (1267)
136 cd08626 PI-PLCc_beta4 Catalyti 92.3 0.16 3.5E-06 52.0 4.3 41 103-145 26-68 (257)
137 cd08623 PI-PLCc_beta1 Catalyti 91.7 0.21 4.6E-06 51.2 4.4 41 103-145 26-68 (258)
138 cd08624 PI-PLCc_beta2 Catalyti 91.6 0.21 4.6E-06 51.3 4.3 42 102-145 25-68 (261)
139 cd08591 PI-PLCc_beta Catalytic 91.0 0.27 5.9E-06 50.3 4.4 41 103-145 26-68 (257)
140 cd08625 PI-PLCc_beta3 Catalyti 90.1 0.34 7.4E-06 49.8 4.3 42 102-145 25-68 (258)
141 KOG1264 Phospholipase C [Lipid 89.5 0.26 5.6E-06 56.8 3.1 49 95-145 322-373 (1267)
142 PLN02230 phosphoinositide phos 89.5 0.4 8.6E-06 55.0 4.5 55 407-461 124-181 (598)
143 PF10223 DUF2181: Uncharacteri 87.7 2.5 5.4E-05 43.2 8.5 36 422-457 11-52 (244)
144 PLN02228 Phosphoinositide phos 86.9 0.74 1.6E-05 52.6 4.6 43 419-461 130-173 (567)
145 KOG0169 Phosphoinositide-speci 85.4 0.92 2E-05 52.5 4.4 59 403-461 294-355 (746)
146 COG1830 FbaB DhnA-type fructos 84.9 14 0.00031 38.1 12.1 185 239-439 46-234 (265)
147 PLN02952 phosphoinositide phos 84.3 1.2 2.6E-05 51.2 4.7 54 408-461 133-190 (599)
148 PF10223 DUF2181: Uncharacteri 83.9 4.6 0.0001 41.3 8.3 36 106-143 11-52 (244)
149 PRK06852 aldolase; Validated 82.6 7.3 0.00016 41.2 9.4 98 330-440 157-263 (304)
150 PLN02230 phosphoinositide phos 82.0 1.5 3.2E-05 50.5 4.2 52 93-146 126-180 (598)
151 PLN02223 phosphoinositide phos 81.3 1.3 2.7E-05 50.2 3.3 39 422-460 134-172 (537)
152 PLN02222 phosphoinositide phos 81.3 1.7 3.8E-05 49.8 4.5 55 407-461 112-170 (581)
153 cd00137 PI-PLCc Catalytic doma 80.4 2.3 5E-05 44.5 4.7 40 421-460 33-72 (274)
154 PRK08227 autoinducer 2 aldolas 78.7 8.2 0.00018 40.0 8.1 94 330-441 130-225 (264)
155 PLN02228 Phosphoinositide phos 78.7 2.2 4.8E-05 48.8 4.2 51 93-145 117-171 (567)
156 PF00388 PI-PLC-X: Phosphatidy 78.3 2.9 6.2E-05 39.2 4.3 39 421-459 25-63 (146)
157 KOG0169 Phosphoinositide-speci 75.9 2.4 5.1E-05 49.3 3.4 50 94-145 301-353 (746)
158 PLN02952 phosphoinositide phos 74.8 3.5 7.6E-05 47.6 4.5 51 93-145 134-188 (599)
159 PRK09250 fructose-bisphosphate 71.0 19 0.00042 38.7 8.6 190 239-439 94-315 (348)
160 cd00137 PI-PLCc Catalytic doma 69.3 7.4 0.00016 40.7 5.1 40 104-145 32-71 (274)
161 PLN02222 phosphoinositide phos 67.3 6 0.00013 45.6 4.2 51 93-145 114-168 (581)
162 cd04728 ThiG Thiazole synthase 65.8 26 0.00057 35.8 8.0 39 329-382 109-150 (248)
163 PLN02223 phosphoinositide phos 65.3 5.8 0.00013 45.0 3.5 51 93-145 117-171 (537)
164 cd00958 DhnA Class I fructose- 64.4 49 0.0011 33.4 9.9 97 330-439 112-211 (235)
165 KOG1265 Phospholipase C [Lipid 63.7 6.1 0.00013 46.6 3.3 37 424-460 343-381 (1189)
166 PRK00208 thiG thiazole synthas 62.7 34 0.00073 35.1 8.1 39 329-382 109-150 (250)
167 PF00388 PI-PLC-X: Phosphatidy 62.1 12 0.00025 35.0 4.5 39 104-144 24-62 (146)
168 PF03060 NMO: Nitronate monoox 61.3 32 0.0007 36.9 8.3 86 330-444 126-221 (330)
169 cd00945 Aldolase_Class_I Class 59.7 20 0.00044 34.6 5.9 67 363-441 16-84 (201)
170 PRK13396 3-deoxy-7-phosphohept 59.2 88 0.0019 33.9 11.0 30 421-450 285-314 (352)
171 cd08589 PI-PLCc_SaPLC1_like Ca 58.3 10 0.00022 40.5 3.6 40 421-460 43-102 (324)
172 PRK08673 3-deoxy-7-phosphohept 56.3 1.2E+02 0.0027 32.6 11.5 26 425-450 280-305 (335)
173 PF04309 G3P_antiterm: Glycero 56.3 17 0.00036 35.4 4.5 58 329-394 33-90 (175)
174 COG2070 Dioxygenases related t 54.4 30 0.00066 37.3 6.6 43 328-386 115-157 (336)
175 COG0826 Collagenase and relate 53.0 14 0.00031 39.9 3.8 109 330-445 52-168 (347)
176 PF13653 GDPD_2: Glycerophosph 49.8 13 0.00028 25.1 1.8 20 423-442 8-27 (30)
177 PF10566 Glyco_hydro_97: Glyco 46.3 16 0.00035 38.1 2.8 122 330-464 76-204 (273)
178 COG1456 CdhE CO dehydrogenase/ 45.2 1.4E+02 0.003 32.2 9.3 39 563-607 149-189 (467)
179 TIGR03151 enACPred_II putative 45.0 1.3E+02 0.0028 32.0 9.5 87 329-444 98-192 (307)
180 PRK07226 fructose-bisphosphate 43.5 1.6E+02 0.0034 30.5 9.8 99 330-439 129-228 (267)
181 PF03102 NeuB: NeuB family; I 41.1 1.4E+02 0.003 30.7 8.6 137 238-445 58-204 (241)
182 cd08589 PI-PLCc_SaPLC1_like Ca 39.2 36 0.00078 36.4 4.2 28 105-134 43-70 (324)
183 PRK13307 bifunctional formalde 38.0 3.6E+02 0.0079 29.7 11.8 38 330-380 266-303 (391)
184 TIGR01362 KDO8P_synth 3-deoxy- 37.4 3.9E+02 0.0085 27.7 11.0 129 300-448 86-227 (258)
185 COG2876 AroA 3-deoxy-D-arabino 36.4 3E+02 0.0064 28.7 9.9 35 411-448 221-255 (286)
186 cd08590 PI-PLCc_Rv2075c_like C 34.9 41 0.00089 35.0 3.7 37 422-459 41-77 (267)
187 PF02638 DUF187: Glycosyl hydr 34.7 31 0.00067 36.8 2.8 18 645-662 73-90 (311)
188 PRK13397 3-deoxy-7-phosphohept 34.1 3E+02 0.0064 28.4 9.7 39 408-449 186-226 (250)
189 CHL00200 trpA tryptophan synth 33.9 3.7E+02 0.0081 27.9 10.6 86 330-438 134-227 (263)
190 PF02638 DUF187: Glycosyl hydr 32.0 35 0.00076 36.4 2.7 18 330-347 73-90 (311)
191 cd00381 IMPDH IMPDH: The catal 31.7 2.9E+02 0.0063 29.5 9.7 86 330-441 123-225 (325)
192 PRK05198 2-dehydro-3-deoxyphos 31.5 5.4E+02 0.012 26.8 10.9 130 300-448 94-235 (264)
193 PRK13398 3-deoxy-7-phosphohept 30.7 6.3E+02 0.014 26.2 13.1 38 411-451 203-240 (266)
194 TIGR03128 RuMP_HxlA 3-hexulose 30.5 2.3E+02 0.0049 27.8 8.2 42 330-383 92-133 (206)
195 PF11814 DUF3335: Peptidase_C3 29.8 3.8E+02 0.0082 26.8 9.2 23 329-351 56-78 (207)
196 TIGR03569 NeuB_NnaB N-acetylne 29.5 7.4E+02 0.016 26.6 13.0 30 238-267 78-108 (329)
197 COG0826 Collagenase and relate 28.7 4.4E+02 0.0095 28.6 10.4 74 524-609 48-122 (347)
198 PRK08649 inosine 5-monophospha 27.8 1.7E+02 0.0038 31.9 7.2 79 330-439 121-212 (368)
199 cd08557 PI-PLCc_bacteria_like 27.7 52 0.0011 33.7 3.1 39 422-460 37-76 (271)
200 cd04726 KGPDC_HPS 3-Keto-L-gul 27.4 4.4E+02 0.0095 25.5 9.6 41 330-383 93-133 (202)
201 CHL00200 trpA tryptophan synth 26.4 5.8E+02 0.012 26.5 10.5 123 524-659 25-148 (263)
202 PRK12457 2-dehydro-3-deoxyphos 25.9 7.9E+02 0.017 25.8 11.1 31 418-448 213-243 (281)
203 PLN02591 tryptophan synthase 25.9 6.2E+02 0.013 26.1 10.5 124 524-660 12-136 (250)
204 COG5016 Pyruvate/oxaloacetate 25.4 1.5E+02 0.0033 32.6 6.0 165 258-441 65-230 (472)
205 PRK14040 oxaloacetate decarbox 25.2 4.6E+02 0.01 30.7 10.4 78 588-665 63-150 (593)
206 cd08588 PI-PLCc_At5g67130_like 25.1 55 0.0012 34.2 2.7 49 408-457 16-69 (270)
207 PRK14864 putative biofilm stre 24.8 3.2E+02 0.0069 24.2 6.9 11 113-125 71-81 (104)
208 KOG1265 Phospholipase C [Lipid 24.7 69 0.0015 38.4 3.5 37 107-145 342-380 (1189)
209 cd06589 GH31 The enzymes of gl 24.7 1.1E+02 0.0025 31.5 5.0 51 327-387 66-117 (265)
210 PRK12581 oxaloacetate decarbox 24.7 5.8E+02 0.013 28.9 10.7 160 257-443 71-239 (468)
211 PRK05848 nicotinate-nucleotide 24.6 3.6E+02 0.0078 28.2 8.6 84 330-440 169-255 (273)
212 PRK10302 hypothetical protein; 24.5 1.4E+02 0.0029 31.3 5.4 74 523-607 110-191 (272)
213 PF06673 L_lactis_ph-MCP: Lact 23.9 78 0.0017 31.0 3.2 47 414-460 255-302 (347)
214 PRK00278 trpC indole-3-glycero 23.9 8.1E+02 0.018 25.2 15.6 136 207-383 40-187 (260)
215 PRK12330 oxaloacetate decarbox 22.9 5.4E+02 0.012 29.4 10.1 77 588-664 63-149 (499)
216 KOG4530 Predicted flavoprotein 22.6 15 0.00032 34.8 -1.8 57 384-444 101-177 (199)
217 PF12957 DUF3846: Domain of un 22.4 1.2E+02 0.0026 26.1 3.9 36 419-459 14-49 (95)
218 PRK06806 fructose-bisphosphate 21.8 6.2E+02 0.013 26.5 9.8 101 330-444 118-232 (281)
219 COG2200 Rtn c-di-GMP phosphodi 21.7 1.2E+02 0.0027 31.0 4.5 40 330-384 196-235 (256)
220 cd04731 HisF The cyclase subun 21.2 2E+02 0.0043 29.1 5.9 77 362-441 82-168 (243)
221 PRK12858 tagatose 1,6-diphosph 21.0 5E+02 0.011 28.1 9.0 105 330-441 146-275 (340)
222 cd03174 DRE_TIM_metallolyase D 20.9 3.2E+02 0.0069 27.7 7.4 99 330-443 118-223 (265)
223 PF05399 EVI2A: Ectropic viral 20.8 1.3E+02 0.0028 29.9 4.1 14 25-38 109-122 (227)
224 cd07938 DRE_TIM_HMGL 3-hydroxy 20.6 2.9E+02 0.0063 28.8 7.0 98 330-441 117-224 (274)
225 PF04413 Glycos_transf_N: 3-De 20.5 3.1E+02 0.0066 26.8 6.8 71 580-660 51-123 (186)
226 PRK05692 hydroxymethylglutaryl 20.4 3.2E+02 0.007 28.7 7.4 98 330-441 123-230 (287)
227 KOG0066 eIF2-interacting prote 20.3 90 0.002 34.7 3.1 30 424-464 739-768 (807)
228 PRK08195 4-hyroxy-2-oxovalerat 20.3 7.1E+02 0.015 26.8 10.1 24 524-548 21-45 (337)
229 PF13167 GTP-bdg_N: GTP-bindin 20.1 3.7E+02 0.0079 23.4 6.3 65 330-396 11-77 (95)
No 1
>cd08603 GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=100.00 E-value=2.7e-60 Score=489.71 Aligned_cols=298 Identities=64% Similarity=1.113 Sum_probs=271.6
Q ss_pred CEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCc
Q 005970 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (667)
Q Consensus 92 ~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g 171 (667)
|+||||||+++.+||||++||+.|+++|+++.+||||||+||||++||+||.+|+|+||+...|++|++++.++|++..|
T Consensus 1 plVIAHRGasg~~PEnTl~Ay~~Ai~~Ga~~d~IE~DV~lTkDgvlVv~HD~~L~rtT~v~~~F~~r~~t~~idG~~~~g 80 (299)
T cd08603 1 PLVIARGGFSGLFPDSSLFAYQFAASSSSPDVALWCDLQLTKDGVGICLPDLNLDNSTTIARVYPKRKKTYSVNGVSTKG 80 (299)
T ss_pred CeEEecCCCCCCCCcchHHHHHHHHHcCCCCCEEEEEeeECcCCcEEEeCCccccccCCCccccccccccccccccccCC
Confidence 68999999999999999999999999999422899999999999999999999999999999999999999999999999
Q ss_pred cccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCCCceEEeccCchhhhhcCCcHHHHHHHHHhhcCCc
Q 005970 172 WFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVVN 251 (667)
Q Consensus 172 ~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~~~ 251 (667)
|++.||||+||++|++.+++..+++.|+| .++||||+|+|++++..++++|||+|.++.+.+.++++.++++|++++.+
T Consensus 81 ~~~~d~TlaELk~L~~~~~~~~r~~~~~g-~~~IpTLeEvl~~~~~~gi~i~ie~~~~~~~~gl~~~~~l~~~L~~~~~v 159 (299)
T cd08603 81 WFSVDFTLAELQQVTLIQGIFSRTPIFDG-QYPISTVEDVVTLAKPEGLWLNVQHDAFYQQHNLSMSSYLLSLSKTVKVD 159 (299)
T ss_pred ceeccCCHHHHhhCCCCCCcccCCcccCC-cCCCCCHHHHHHHhHhcCeEEEEecHHHHHHcCCCHHHHHHHHHHHcCcE
Confidence 99999999999999998776667888888 56999999999999888999999999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecCCCccccccCCCCCCCCChH
Q 005970 252 YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPHTT 331 (667)
Q Consensus 252 ~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~~~~~~~~~~l~~~~~ 331 (667)
+||||+...|+++++.....+.++++.+++.+.+.+..+..|++|..+|++|++||++++|++.+++|.+.++++..++.
T Consensus 160 ~iQSfe~~~L~~l~~~~~~~~~~Lv~~l~~~~~~~~~~~~~y~~~~~~L~eIa~yAdgig~~k~~i~p~~~~~~~~~~t~ 239 (299)
T cd08603 160 YISSPEVGFLKSIGGRVGRNGTKLVFRFLDKDDVEPSTNQTYGSILKNLTFIKTFASGILVPKSYIWPVDSDQYLQPATS 239 (299)
T ss_pred EEECCCHHHHHHHHHhcccCCCCeeeEeccCCCcCCCCCccHHHHHHhHHHHHHHHhhcCCChhheeecCCCCcccCccH
Confidence 99999999999999863111578887677666666667789999999999999999999999999999877777888889
Q ss_pred HHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchh
Q 005970 332 IVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSA 390 (667)
Q Consensus 332 ~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~ 390 (667)
+|+.||++||.||+||+++|....++|..|+..|+..+++.|++||||||||+|+++.+
T Consensus 240 lV~~Ah~agL~Vh~~tfr~e~~~~~~~~~d~~~e~~~~~~~g~~~vDGvfTDfP~~a~~ 298 (299)
T cd08603 240 LVQDAHKAGLEVYASGFANDFDISYNYSYDPVAEYLSFVGNGNFSVDGVLSDFPITASE 298 (299)
T ss_pred HHHHHHHcCCeEEEEEeeCCCCccccccCCHHHHHHHHHhcCCCCCCEEEecCchhhcc
Confidence 99999999999999999999668888888999999999987767799999999998764
No 2
>cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv
Probab=100.00 E-value=3.4e-50 Score=422.21 Aligned_cols=287 Identities=44% Similarity=0.732 Sum_probs=231.3
Q ss_pred CEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCc
Q 005970 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (667)
Q Consensus 92 ~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g 171 (667)
|+||||||+++.+||||++||+.|+++||| +||||||+||||++||+||.+|+||||+.+.++.+++++.++|.+..|
T Consensus 1 p~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~IE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~~~~~~g 78 (302)
T cd08571 1 PLVIARGGASGDYPDSTDLAYQKAISDGAD--VLDCDVQLTKDGVPICLPSINLDNSTTIASVFPKRKKTYVVEGQSTSG 78 (302)
T ss_pred CeEEeCCCcCCCCCcchHHHHHHHHHcCCC--EEEeeeeEcCCCcEEEeCCchhcCCcccccccccccceecccCcccCC
Confidence 689999999999999999999999999999 999999999999999999999999999999999999999999998889
Q ss_pred cccccCCHHhhcccccccccc----CCCCCCCCCCCccCCHHHHHHhhCC---CceEEeccCchhhhh-cCCcHHHHHHH
Q 005970 172 WFSIDYTLNDLSNIILNQGVY----SRTDKFDGNGFQILTVQDMARQIKP---PGLWLNIQHDAFYAQ-HNLSMRSFVLS 243 (667)
Q Consensus 172 ~~v~d~t~~el~~l~~~~~~~----~~~~~~~~~~~~iptL~e~l~~~~~---~~~~ieiK~~~~~~~-~~~~~~~~l~~ 243 (667)
++|.||||+||++|+++.++. .+.+.|.+ +++||||+|+|++++. .+++||||.+..... .+..+++.+++
T Consensus 79 ~~v~d~T~aeL~~l~~~~~~~~~~~~~~~~~~~-~~~IptL~evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~ 157 (302)
T cd08571 79 IFSFDLTWAEIQTLKPIISNPFSVLFRNPRNDN-AGKILTLEDFLTLAKPKSLSGVWINVENAAFLAEHKGLLSVDAVLT 157 (302)
T ss_pred eeeeeCCHHHHhhCcccccCcccccCCCcccCC-CCCcCCHHHHHHhhhccCCceEEEEccCchhhhhhccccHHHHHHH
Confidence 889999999999999865332 24455666 6799999999999975 579999997654332 12468889999
Q ss_pred HHhhcCC------ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecCCCccc
Q 005970 244 VSRSVVV------NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYI 317 (667)
Q Consensus 244 ~l~~~~~------~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~~ 317 (667)
+++++++ ++||||++.+|+++++..+.+..++++ +.... .. .+ ....+.++..||.++++++..+
T Consensus 158 ~l~~~~~~~~~~~v~i~SF~~~~L~~~~~~~~~p~v~~~~-l~~~~--~~----~~--~~~~l~~~~~~a~~v~~~~~~~ 228 (302)
T cd08571 158 SLSKAGYDQTAKKVYISSPDSSVLKSFKKRVGTKLVFRVL-DVDDT--EP----DT--LLSNLTEIKKFASGVLVPKSYI 228 (302)
T ss_pred HHHHcCCCCCCCCEEEeCCCHHHHHHHHhccCCCceEEEe-ecCCC--cC----CC--ChhHHHHHHHhcCccccChhHe
Confidence 9999865 389999999999999985112455554 32111 00 00 0112567777899999988777
Q ss_pred cccCCCCCCCCChHHHHHHHHcCCeEEEEeccCC-CCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhh
Q 005970 318 WPVDESLYLLPHTTIVLDAHKERLEVFASNFAND-IPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAA 391 (667)
Q Consensus 318 ~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~-~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~ 391 (667)
.|.+...+...++.+|+.+|++|++|++||||++ ....|.|..|+..++..++..+ +||||||||+|++++++
T Consensus 229 ~~~~~~~~~~~~~~~V~~ah~~Gl~V~~wTvn~~~~~~~~~~~~~~~~~~~~~~~~~-~gVDGiiTD~P~~~~~~ 302 (302)
T cd08571 229 WPVDSDSFLTPQTSVVQDAHKAGLEVYVSGFANEFVSLAYDYSADPTLEILSFVGNG-NSVDGVITDFPATAARA 302 (302)
T ss_pred eecCCCCcccCccHHHHHHHHcCCEEEEEEEecCcccccccccCCHHHHHHHHHHhc-CCCCEEEecCchhhhcC
Confidence 6643223344456899999999999999999987 4578888889999999999761 14999999999988764
No 3
>cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.
Probab=100.00 E-value=1.1e-48 Score=411.96 Aligned_cols=284 Identities=31% Similarity=0.487 Sum_probs=235.7
Q ss_pred CEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccc--cccccccccccCCCCC
Q 005970 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQ--IFKTQQKNYLVNGVPT 169 (667)
Q Consensus 92 ~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~--~~~~~~~~~~~~g~~~ 169 (667)
|+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|++.+ .|+.|++++.++|.+.
T Consensus 1 p~iiAHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DVqlTkDg~lVv~HD~~l~rtt~~~~~~~~~~r~~~~~i~~~~~ 78 (309)
T cd08602 1 PLVIAHRGASGYRPEHTLAAYQLAIEQGAD--FIEPDLVSTKDGVLICRHEPELSGTTDVADHPEFADRKTTKTVDGVNV 78 (309)
T ss_pred CeEEecCCCCCCCCccHHHHHHHHHHcCCC--EEEEeeeECCCCcEEEeCCCccccccCccccccccccccccccCCccc
Confidence 689999999999999999999999999999 999999999999999999999999999876 3788888888899888
Q ss_pred CccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhC--------CCceEEeccCchhhhh-cCCcHHHH
Q 005970 170 PGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--------PPGLWLNIQHDAFYAQ-HNLSMRSF 240 (667)
Q Consensus 170 ~g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~--------~~~~~ieiK~~~~~~~-~~~~~~~~ 240 (667)
.|++|.+|||+||++|+++.++..+++.|.+ .++||||+|+|++++ +.+++||||.+..... .+..+++.
T Consensus 79 ~~~~v~d~t~~eL~~l~~~~~~~~~~~~~~~-~~~iptL~Evl~~~~~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~ 157 (309)
T cd08602 79 TGWFTEDFTLAELKTLRARQRLPYRDQSYDG-QFPIPTFEEIIALAKAASAATGRTVGIYPEIKHPTYFNAPLGLPMEDK 157 (309)
T ss_pred CCeeeccCCHHHHhhCccCCcCcccCcccCC-CcCcCCHHHHHHHHHhhhhcccccceeEEeecCchhcccccCCCHHHH
Confidence 8888999999999999999887554555666 569999999999985 3579999997664332 34578999
Q ss_pred HHHHHhhcCC------ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCcc---C--CCCCcchhHHhh--cHHHHHhhc
Q 005970 241 VLSVSRSVVV------NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEI---E--PTTNQTYGSLLK--NLTFIKTFA 307 (667)
Q Consensus 241 l~~~l~~~~~------~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~---~--~~~~~~y~~~~~--~l~~i~~~a 307 (667)
++++++++++ ++|+|||+++|+++++.. +.++++.+ ..... . ...+..|.++.. .++.+..++
T Consensus 158 v~~~l~~~~~~~~~~~v~i~SFd~~~L~~~~~~~---~~~~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd08602 158 LLETLKKYGYTGKKAPVFIQSFEVTNLKYLRNKT---DLPLVQLI-DDATIPPQDTPEGDSRTYADLTTDAGLKEIATYA 233 (309)
T ss_pred HHHHHHHcCCCCCCCCEEEECCCHHHHHHHHhhh---CCCeEEEe-cCCCCCcccccccCccchhhhcCHHHHHHHHhhc
Confidence 9999999875 389999999999999985 46777633 22211 0 012345554433 466777789
Q ss_pred ceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCC-CCcccCCCCChHHHHHHHHhCCCcccceEecCCC
Q 005970 308 SGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFAND-IPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (667)
Q Consensus 308 ~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~-~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P 385 (667)
.+++|++..+.|....+.+..++++|+.+|++|++|++||||++ ....++|..|+.++|+.++++| |||||||+|
T Consensus 234 ~~i~~~~~~~~~~~~~~~~~~~~~~v~~a~~~gl~v~~wTvn~~~~~~~~~~~~~~~~~~~~l~~~G---VdgiiTD~P 309 (309)
T cd08602 234 DGIGPWKDLIIPSDANGRLGTPTDLVEDAHAAGLQVHPYTFRNENTFLPPDFFGDPYAEYRAFLDAG---VDGLFTDFP 309 (309)
T ss_pred eEEecchheEEecCCCCcccCccHHHHHHHHcCCEEEEEEecCCCcccCcccCCCHHHHHHHHHHhC---CCEEeCCCC
Confidence 99999988887765555555667899999999999999999987 4677899999999999999887 999999998
No 4
>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional
Probab=100.00 E-value=3.7e-47 Score=405.97 Aligned_cols=291 Identities=23% Similarity=0.348 Sum_probs=215.1
Q ss_pred CCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCC
Q 005970 89 GDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVP 168 (667)
Q Consensus 89 ~~~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~ 168 (667)
..+|+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|++.+.|+.++++ +|
T Consensus 24 ~~~pliiAHRGas~~~PENTl~Af~~A~~~GaD--~IE~DV~lTkDg~lVv~HD~~l~rtT~~~~~~~~~~~~---~g-- 96 (355)
T PRK11143 24 SAEKIVIAHRGASGYLPEHTLPAKAMAYAQGAD--YLEQDLVMTKDDQLVVLHDHYLDRVTDVAERFPDRARK---DG-- 96 (355)
T ss_pred CCCcEEEECCCCCCCCCcchHHHHHHHHHcCCC--EEEEeeeEccCCcEEEeCCchhcccCCccccccccccc---CC--
Confidence 347999999999999999999999999999999 99999999999999999999999999988888776654 22
Q ss_pred CCccccccCCHHhhccccccccccC--------CCCCCC--CCCCccCCHHHHHHhhC--------CCceEEeccCchhh
Q 005970 169 TPGWFSIDYTLNDLSNIILNQGVYS--------RTDKFD--GNGFQILTVQDMARQIK--------PPGLWLNIQHDAFY 230 (667)
Q Consensus 169 ~~g~~v~d~t~~el~~l~~~~~~~~--------~~~~~~--~~~~~iptL~e~l~~~~--------~~~~~ieiK~~~~~ 230 (667)
+++|.+|||+||++|+++.++.. ++..|. ..+++||||+|+|++++ +.+++||||.+.+.
T Consensus 97 --~~~v~dlT~aEL~~ld~~~~f~~~~g~~~~~~~~~~~~~~~~~~IPTL~Evl~~~~~~~~~~~~~~~l~IEiK~~~~~ 174 (355)
T PRK11143 97 --RYYAIDFTLDEIKSLKFTEGFDIENGKKVQVYPGRFPMGKSDFRVHTFEEEIEFIQGLNHSTGKNIGIYPEIKAPWFH 174 (355)
T ss_pred --ceeEeeCcHHHHhhCCCCCCcccccccccccccccccccCCCCccCCHHHHHHHHHHhhhhcCCCceeeEeccCcccc
Confidence 36899999999999999987531 112222 11479999999999885 34799999986544
Q ss_pred hhcCCcHHHHHHHHHhhcCC------ceEecCCHHHHHHHHhhhCCC---CCceEEEeccCCccCC--------CCCcch
Q 005970 231 AQHNLSMRSFVLSVSRSVVV------NYISSPEVNFLRSIAARFRPS---MTKLVFRFLGKSEIEP--------TTNQTY 293 (667)
Q Consensus 231 ~~~~~~~~~~l~~~l~~~~~------~~i~SFd~~~L~~l~~~~~~~---~~~~~~~l~~~~~~~~--------~~~~~y 293 (667)
...+.++++.++++++++++ ++|+|||+.+|+++++...|. +.++++.+........ ..+..|
T Consensus 175 ~~~~~~~~~~v~~~l~~~g~~~~~~~v~i~SFd~~~L~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 254 (355)
T PRK11143 175 HQEGKDIAAKVLEVLKKYGYTGKDDKVYLQCFDANELKRIKNELEPKMGMDLKLVQLIAYTDWNETQEKQPDGKWVNYNY 254 (355)
T ss_pred cccchhHHHHHHHHHHHhCCCCCCCCEEEeCCCHHHHHHHHhhcCccccCCcceEEEeccCCCcccccccccCcccccch
Confidence 33345688999999999876 489999999999999843231 1466653321110000 011234
Q ss_pred hHHhh--cHHHHHhhcceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHH-
Q 005970 294 GSLLK--NLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFI- 370 (667)
Q Consensus 294 ~~~~~--~l~~i~~~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li- 370 (667)
.++.. .+..+..++.++.|.+..+.+.+....+..++++|+++|++|++|++||||++... .|..| ..+|..++
T Consensus 255 ~~~~~~~~~~~~~~~a~~i~p~~~~l~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTVn~~~~~--~~~~d-~~~~~~~~~ 331 (355)
T PRK11143 255 DWMFKPGAMKEVAKYADGIGPDYHMLVDETSTPGNIKLTGMVKEAHQAKLVVHPYTVRADQLP--EYATD-VNQLYDILY 331 (355)
T ss_pred hhhcChhhHHHHHhhceeecCChhheeeccccCCccChHHHHHHHHHcCCEEEEEEeccccch--hhhcC-hHHHHHHHH
Confidence 43222 35666778999998776554321122244567899999999999999999987322 34334 45565554
Q ss_pred -hCCCcccceEecCCCCCchhhhhh
Q 005970 371 -DNGDFSVDGVLSDFPLTPSAAVDC 394 (667)
Q Consensus 371 -~~G~~gVDGIiTD~P~~~~~~l~~ 394 (667)
++| |||||||+|+++++++.+
T Consensus 332 ~~~G---VDGIiTD~P~~~~~~l~~ 353 (355)
T PRK11143 332 NQAG---VDGVFTDFPDKAVKFLNK 353 (355)
T ss_pred HccC---CCEEEcCChHHHHHHHhc
Confidence 666 999999999999888743
No 5
>cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=100.00 E-value=7e-47 Score=397.07 Aligned_cols=280 Identities=23% Similarity=0.410 Sum_probs=217.4
Q ss_pred CEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccc-cccccccccccCCCCCC
Q 005970 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQ-IFKTQQKNYLVNGVPTP 170 (667)
Q Consensus 92 ~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~-~~~~~~~~~~~~g~~~~ 170 (667)
|+||||||+++.+||||++||+.|+++|+| +||||||+||||++||+||.+|+||||+.+ .|+.+++++ .+..+.+
T Consensus 1 p~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDG~lVv~HD~~l~rtt~~~~~~~~~~~~~~-~~~~~~~ 77 (300)
T cd08604 1 PLIISHNGASGDYPGCTDLAYQKAVKDGAD--VIDCSVQMSKDGVPFCLDSINLINSTTVATSKFSNRATTV-PEIGSTS 77 (300)
T ss_pred CeEEecCCcCCCCCcchHHHHHHHHHcCCC--EEEEeeeEcCCCCEEEeccccccCcccCCccccccccccc-ccccccC
Confidence 689999999999999999999999999999 999999999999999999999999999876 677777663 3333456
Q ss_pred ccccccCCHHhhccccccc---ccc---CCCCCCCCCCCccCCHHHHHHhhCC---CceEEeccCchhhh-hcCCcHHHH
Q 005970 171 GWFSIDYTLNDLSNIILNQ---GVY---SRTDKFDGNGFQILTVQDMARQIKP---PGLWLNIQHDAFYA-QHNLSMRSF 240 (667)
Q Consensus 171 g~~v~d~t~~el~~l~~~~---~~~---~~~~~~~~~~~~iptL~e~l~~~~~---~~~~ieiK~~~~~~-~~~~~~~~~ 240 (667)
|+++.||||+||++|+++. |+. .+.+.|.+ +++||||+|+|++++. .+++||||.+.... ..+..+++.
T Consensus 78 ~~~v~d~t~~eL~~l~~~~~~~~~~~~~~~~~~~~~-~~~iptL~Evl~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~ 156 (300)
T cd08604 78 GIFTFDLTWSEIQTLKPAISNPYSVTGLFRNPANKN-AGKFLTLSDFLDLAKNKSLSGVLINVENAAYLAEKKGLDVVDA 156 (300)
T ss_pred ceeeecCcHHHHhhCccCCcCcccccCcCCCcccCC-CCCCCCHHHHHHHHHhcCCceEEEEeeccchhhhccCccHHHH
Confidence 7789999999999999874 221 23455665 5799999999999864 47999999765432 223468899
Q ss_pred HHHHHhhcCC-------ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecCC
Q 005970 241 VLSVSRSVVV-------NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVP 313 (667)
Q Consensus 241 l~~~l~~~~~-------~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~ 313 (667)
++++++++++ ++|+||++.+|+++++.. +.++++ ++.... ..+. ...++.+..++.++++.
T Consensus 157 v~~~l~~~~~~~~~~~~v~i~SF~~~~L~~~~~~~---~~~~~~-l~~~~~------~~~~--~~~~~~~~~~a~~v~~~ 224 (300)
T cd08604 157 VLDALTNAGYDNQTAQKVLIQSTDSSVLAAFKKQI---SYERVY-VVDETI------RDAS--DSSIEEIKKFADAVVID 224 (300)
T ss_pred HHHHHHHcCCCCCCCCeEEEEcCCHHHHHHHHhcc---CCceEE-EecCcc------cccC--hhHHHHHHHhccEEEeC
Confidence 9999998876 389999999999999985 467775 332110 0110 01245666778889988
Q ss_pred CccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCC-CCcccCCCCChHHHHHH-HHhCCCcccceEecCCCCCchhh
Q 005970 314 KDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFAND-IPISFNYSYDPLTEYLS-FIDNGDFSVDGVLSDFPLTPSAA 391 (667)
Q Consensus 314 ~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~-~~~~~~~~~d~~~e~~~-li~~G~~gVDGIiTD~P~~~~~~ 391 (667)
+..+.|... ..+...+.+|+.+|++|++|++||||++ ....++|..|+..++.+ +.++| |||||||+|+++.++
T Consensus 225 ~~~~~~~~~-~~~~~~~~~v~~a~~~Gl~v~vwTvn~~~~~~~~~~~~~~~~~~~~~~~~~G---VdgIiTD~P~~~~~~ 300 (300)
T cd08604 225 RGSVFPVST-SFLTRQTNVVEKLQSANLTVYVEVLRNEFVSLAFDFFADPTVEINSYVQGAG---VDGFITEFPATAARY 300 (300)
T ss_pred hhhcccccC-CcccCchHHHHHHHHCCCEEEEEEecCCccccchhccCCHHHHHHHHHHHcC---CCEEEecCchhhhcC
Confidence 877765432 2233345899999999999999999987 56788888888766555 55666 999999999988764
No 6
>cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP
Probab=100.00 E-value=7.5e-47 Score=399.71 Aligned_cols=278 Identities=26% Similarity=0.356 Sum_probs=209.2
Q ss_pred CEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCc
Q 005970 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (667)
Q Consensus 92 ~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g 171 (667)
|+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+||+.+.++.++.+ +| +
T Consensus 1 ~lviAHRG~s~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~~~~~~~~---~g----~ 71 (318)
T cd08600 1 KIIIAHRGASGYLPEHTLEAKALAYAQGAD--YLEQDVVLTKDDKLVVIHDHYLDNVTNVAEKFPDRKRK---DG----R 71 (318)
T ss_pred CeEEEcCCCCCCCCccHHHHHHHHHHcCCC--EEEeeeeECcCCcEEEeCCchhhccCCccccccccccc---CC----c
Confidence 689999999999999999999999999999 99999999999999999999999999988887777654 22 3
Q ss_pred cccccCCHHhhccccccccccCC--------CCCC---CCCCCccCCHHHHHHhhC--------CCceEEeccCchhhhh
Q 005970 172 WFSIDYTLNDLSNIILNQGVYSR--------TDKF---DGNGFQILTVQDMARQIK--------PPGLWLNIQHDAFYAQ 232 (667)
Q Consensus 172 ~~v~d~t~~el~~l~~~~~~~~~--------~~~~---~~~~~~iptL~e~l~~~~--------~~~~~ieiK~~~~~~~ 232 (667)
++|.||||+||++|+++.|+..+ +..| .+ +++||||+|+|++++ ..+++||||.+.++.+
T Consensus 72 ~~v~dlT~aEL~~ld~g~~f~~~~~~~~~~~~~~~~~~~~-~~~IptL~evl~~~~~~~~~~~~~~~l~iEiK~~~~~~~ 150 (318)
T cd08600 72 YYVIDFTLDELKSLSVTERFDIENGKKVQVYPNRFPLWKS-DFKIHTLEEEIELIQGLNKSTGKNVGIYPEIKAPWFHHQ 150 (318)
T ss_pred eeEeeCcHHHHhhCCCCCCcccccccccccccccCcccCC-CCccCCHHHHHHHHHHhhhhcCCcceEEEeecCchhhhh
Confidence 68999999999999999887432 1112 12 469999999999884 4579999997764443
Q ss_pred cCCcHHHHHHHHHhhcCC------ceEecCCHHHHHHHHh-hhCC---CCCceEEEeccCCccCC--------CCCcchh
Q 005970 233 HNLSMRSFVLSVSRSVVV------NYISSPEVNFLRSIAA-RFRP---SMTKLVFRFLGKSEIEP--------TTNQTYG 294 (667)
Q Consensus 233 ~~~~~~~~l~~~l~~~~~------~~i~SFd~~~L~~l~~-~~~~---~~~~~~~~l~~~~~~~~--------~~~~~y~ 294 (667)
.+.++++.++++++++++ ++|+||++.+|+++++ .. | .++++++++ ....... ..+..|+
T Consensus 151 ~~~~~~~~v~~~l~~~~~~~~~~~v~i~SF~~~~L~~~~~~~~-p~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~ 228 (318)
T cd08600 151 EGKDIAAATLEVLKKYGYTSKNDKVYLQTFDPNELKRIKNELL-PKMGMDLKLVQLI-AYTDWGETQEKDPGGWVNYDYD 228 (318)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCeEEEEeCCHHHHHHHHHhhC-ccccCCcceEEEe-ccCCCCcccccccCCccccchh
Confidence 445789999999999886 4999999999999997 43 2 046777633 2111111 1123455
Q ss_pred HHhh--cHHHHHhhcceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHH-HHh
Q 005970 295 SLLK--NLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLS-FID 371 (667)
Q Consensus 295 ~~~~--~l~~i~~~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~-li~ 371 (667)
++.. ++..++.+|++++|++..+.+.+.......++++|++||++|+.|++||||++....+. .+....+.. +++
T Consensus 229 ~~~~~~~l~~~~~~a~~i~~~~~~l~~~~~~~~~~~~~~~V~~ah~~Gl~V~~wTvn~~~~~~~~--~~~~~~~~~~l~~ 306 (318)
T cd08600 229 WMFTKGGLKEIAKYADGVGPWYSMIIEEKSSKGNIVLTDLVKDAHEAGLEVHPYTVRKDALPEYA--KDADQLLDALLNK 306 (318)
T ss_pred hhcCHHHHHHHHHhheeccCCHHHcccccCCCCccChHHHHHHHHHcCCEEEEEeccCCcccccc--CCHHHHHHHHHHh
Confidence 5432 46777888999999888765532221223457899999999999999999987422221 222222122 466
Q ss_pred CCCcccceEecCCCC
Q 005970 372 NGDFSVDGVLSDFPL 386 (667)
Q Consensus 372 ~G~~gVDGIiTD~P~ 386 (667)
+| |||||||+|+
T Consensus 307 ~G---VDGiiTD~P~ 318 (318)
T cd08600 307 AG---VDGVFTDFPD 318 (318)
T ss_pred cC---CcEEEcCCCC
Confidence 66 9999999996
No 7
>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=2.2e-46 Score=398.39 Aligned_cols=291 Identities=16% Similarity=0.158 Sum_probs=220.8
Q ss_pred CCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCC-CCcccccccc--cccccccccccCC
Q 005970 90 DPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDL-KLDNASNIAQ--IFKTQQKNYLVNG 166 (667)
Q Consensus 90 ~~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~-~l~rtt~~~~--~~~~~~~~~~~~g 166 (667)
..++||||||+++.+||||++||+.|+++||| +||+|||+||||++||+||. +|+||||+.. .|+.++++..++|
T Consensus 15 ~~~~iIAHRGasg~~PEnTl~Af~~Ai~~Gad--~IE~DV~lTkDg~lVV~HD~~~L~rtTnv~~~pe~a~r~~~~~~~g 92 (356)
T cd08560 15 KTDFSIGHRGAPLQFPEHTRESYEAAARMGAG--ILECDVTFTKDRELVCRHSQCDLHTTTNILAIPELAAKCTQPFTPA 92 (356)
T ss_pred CCceEEEcCCCCCCCCcchHHHHHHHHHcCCC--EEEEEeeEccCCcEEEECCCccccCccCCccccchhhhcccccccc
Confidence 35889999999999999999999999999999 99999999999999999997 8999999986 5888888877777
Q ss_pred CC----CCccccccCCHHhhcccccccccc----------------CCCCCCCCCCCccCCHHHHHHhhC--CCceEEec
Q 005970 167 VP----TPGWFSIDYTLNDLSNIILNQGVY----------------SRTDKFDGNGFQILTVQDMARQIK--PPGLWLNI 224 (667)
Q Consensus 167 ~~----~~g~~v~d~t~~el~~l~~~~~~~----------------~~~~~~~~~~~~iptL~e~l~~~~--~~~~~iei 224 (667)
.. .++|+|.||||+||++|+++.+.. .++..|.+ +++||||+|+|++++ ++++++||
T Consensus 93 ~~~~~~~~~~~v~d~TlaELk~L~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~IPTL~Evl~lv~~~~v~l~iEi 171 (356)
T cd08560 93 NATKPASAECCTSDITLAEFKSLCGKMDASNPSATTPEEYQNGTPDWRTDLYAT-CGTLMTHKESIALFKSLGVKMTPEL 171 (356)
T ss_pred ccccccccCcchhhCcHHHHhcCCCccccccccccccccccccccccccccccC-CCCCCCHHHHHHHHHhcCceEEEEe
Confidence 65 567899999999999998763210 12334555 579999999999986 47899999
Q ss_pred cCchhhhhc-----CCcHHHHHHHHHhhcCC----ceEecCCHHHHHHHHhhhCCCCCce--EEEeccCCccCCCCCcch
Q 005970 225 QHDAFYAQH-----NLSMRSFVLSVSRSVVV----NYISSPEVNFLRSIAARFRPSMTKL--VFRFLGKSEIEPTTNQTY 293 (667)
Q Consensus 225 K~~~~~~~~-----~~~~~~~l~~~l~~~~~----~~i~SFd~~~L~~l~~~~~~~~~~~--~~~l~~~~~~~~~~~~~y 293 (667)
|.+.++... ...+++.++++++++++ ++|||||+..|+++++.. | ..++ ++ +...... . ...+
T Consensus 172 K~~~~~~~~~g~~~~~~~~~~l~~~l~~~g~~~~~v~iqSFd~~~L~~~~~~~-p-~~~~~l~~-l~~~~~~-~--~~~~ 245 (356)
T cd08560 172 KSPSVPMPFDGNYTQEDYAQQMIDEYKEAGVPPSRVWPQSFNLDDIFYWIKNE-P-DFGRQAVY-LDDRDDT-A--DFPA 245 (356)
T ss_pred CCCcccccccccccHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHHHhC-C-CCCeeEEE-EccCCcc-c--cccc
Confidence 987653321 12588899999999875 499999999999998875 3 3433 43 2222110 0 0112
Q ss_pred hHHhhcHHHH-HhhcceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCC-CCc--c-c---------CCC
Q 005970 294 GSLLKNLTFI-KTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFAND-IPI--S-F---------NYS 359 (667)
Q Consensus 294 ~~~~~~l~~i-~~~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~-~~~--~-~---------~~~ 359 (667)
.++ ..++.+ +.++++++|++..+++.+..+. ..++.+|+.||++|++|++|||+++ .+. . + ++.
T Consensus 246 ~~~-~~l~~i~a~~a~~i~P~~~~l~~~~~~~~-~~~~~~v~~Ah~~GL~V~~WTvr~~~~~~~~~~~~~~~~~~~~~~~ 323 (356)
T cd08560 246 TWS-PSMDELKARGVNIIAPPIWMLVDPDENGK-IVPSEYAKAAKAAGLDIITWTLERSGPLASGGGWYYQTIEDVINND 323 (356)
T ss_pred cHH-HHHHHHHhCCccEecCchhhccccccccc-cCCHHHHHHHHHcCCEEEEEEeecCcccccCccccccccccccccc
Confidence 222 346676 5678999999887765533332 3568899999999999999999876 222 1 1 123
Q ss_pred CChHHHHHHHH-hCCCcccceEecCCCCCchhhhhh
Q 005970 360 YDPLTEYLSFI-DNGDFSVDGVLSDFPLTPSAAVDC 394 (667)
Q Consensus 360 ~d~~~e~~~li-~~G~~gVDGIiTD~P~~~~~~l~~ 394 (667)
.|-..++..++ ++| |||||||+|+++..|.+|
T Consensus 324 ~~~~~~~~~~~~~~G---vDGvftD~p~~~~~~~~~ 356 (356)
T cd08560 324 GDMYNVLDVLARDVG---ILGIFSDWPATVTYYANC 356 (356)
T ss_pred ccHHHHHHHHHHhcC---CCEEEccCCCceeEecCC
Confidence 34457777777 455 999999999999888764
No 8
>cd08603 GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=100.00 E-value=1.3e-45 Score=380.72 Aligned_cols=240 Identities=23% Similarity=0.324 Sum_probs=206.6
Q ss_pred eeEEEecCCCCCCCchhHHHHHHHHHCCC--CeEEcceeeecCCeEEEeccCcccccccCCCCccCCcccccc-ccccCC
Q 005970 408 LLVISKNGASGDYPSCTNLAYQKAISDGV--DFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIP-EIMAGS 484 (667)
Q Consensus 408 ~~iiaHRG~~~~~PENTl~Af~~A~~~Ga--d~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~-~~~~~~ 484 (667)
|+||||||++|.+||||++||+.|+++|| |+||||||+||||++||+||.+|+|+||++.. |++|++++. ||...+
T Consensus 1 plVIAHRGasg~~PEnTl~Ay~~Ai~~Ga~~d~IE~DV~lTkDgvlVv~HD~~L~rtT~v~~~-F~~r~~t~~idG~~~~ 79 (299)
T cd08603 1 PLVIARGGFSGLFPDSSLFAYQFAASSSSPDVALWCDLQLTKDGVGICLPDLNLDNSTTIARV-YPKRKKTYSVNGVSTK 79 (299)
T ss_pred CeEEecCCCCCCCCcchHHHHHHHHHcCCCCCEEEEEeeECcCCcEEEeCCccccccCCCccc-cccccccccccccccC
Confidence 57999999999999999999999999999 47999999999999999999999999998774 999998854 898889
Q ss_pred CcccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHH
Q 005970 485 GIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNS 564 (667)
Q Consensus 485 g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~ 564 (667)
|+++.|+||+||++|++....+ .+++.|.|..+||||+|+|++++.. ++++|||.+.++. ..|..+++.
T Consensus 80 g~~~~d~TlaELk~L~~~~~~~------~r~~~~~g~~~IpTLeEvl~~~~~~----gi~i~ie~~~~~~-~~gl~~~~~ 148 (299)
T cd08603 80 GWFSVDFTLAELQQVTLIQGIF------SRTPIFDGQYPISTVEDVVTLAKPE----GLWLNVQHDAFYQ-QHNLSMSSY 148 (299)
T ss_pred CceeccCCHHHHhhCCCCCCcc------cCCcccCCcCCCCCHHHHHHHhHhc----CeEEEEecHHHHH-HcCCCHHHH
Confidence 9889999999999999875332 2567888766999999999999864 7999999999876 578899999
Q ss_pred HHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc---cCCcEEE-Eecc---------chhhhhHHHHHHHHHhhhhcCC
Q 005970 565 VMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK---TSYELVY-KVKE---------NIRDALNQTIEDIKKFADSVVL 631 (667)
Q Consensus 565 v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~---p~~~~~~-L~~~---------~~~~~~~~~l~~~~~~a~~i~~ 631 (667)
|+++|++++ .++||||+...|+++++. +++++++ +.+. .|+++.. .++++++||++|||
T Consensus 149 l~~~L~~~~-------~v~iQSfe~~~L~~l~~~~~~~~~~Lv~~l~~~~~~~~~~~~~y~~~~~-~L~eIa~yAdgig~ 220 (299)
T cd08603 149 LLSLSKTVK-------VDYISSPEVGFLKSIGGRVGRNGTKLVFRFLDKDDVEPSTNQTYGSILK-NLTFIKTFASGILV 220 (299)
T ss_pred HHHHHHHcC-------cEEEECCCHHHHHHHHHhcccCCCCeeeEeccCCCcCCCCCccHHHHHH-hHHHHHHHHhhcCC
Confidence 999999874 489999999999999975 5788886 5543 1233332 68999999999999
Q ss_pred C-eeEEeCCC---CCccHHHHHHHHHcCCcEEEEeccCCC
Q 005970 632 T-MSLYLKRG---TSSQTQLWRSTHITRELVLMELLQNSL 667 (667)
Q Consensus 632 ~-~~i~~~~~---~~~~~~~v~~ah~~Gl~V~vWTVn~e~ 667 (667)
+ ..+.|... +...+.+|+.||++||.||+||+++|+
T Consensus 221 ~k~~i~p~~~~~~~~~~t~lV~~Ah~agL~Vh~~tfr~e~ 260 (299)
T cd08603 221 PKSYIWPVDSDQYLQPATSLVQDAHKAGLEVYASGFANDF 260 (299)
T ss_pred ChhheeecCCCCcccCccHHHHHHHHcCCeEEEEEeeCCC
Confidence 9 78887642 445578999999999999999999985
No 9
>cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=100.00 E-value=2.5e-45 Score=385.34 Aligned_cols=258 Identities=60% Similarity=0.909 Sum_probs=203.0
Q ss_pred eeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcc
Q 005970 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIF 487 (667)
Q Consensus 408 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~ 487 (667)
|+||||||+++.+||||++||++|+++|||+||||||+||||++||+||.+|+|+||.....|++|+++.++....+|++
T Consensus 1 p~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~rtt~~~~~~~~~~~~~~~~~~~~~~~~ 80 (300)
T cd08604 1 PLIISHNGASGDYPGCTDLAYQKAVKDGADVIDCSVQMSKDGVPFCLDSINLINSTTVATSKFSNRATTVPEIGSTSGIF 80 (300)
T ss_pred CeEEecCCcCCCCCcchHHHHHHHHHcCCCEEEEeeeEcCCCCEEEeccccccCcccCCcccccccccccccccccCcee
Confidence 57999999999999999999999999999999999999999999999999999999987656999988877666567766
Q ss_pred cccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHH
Q 005970 488 SFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVME 567 (667)
Q Consensus 488 i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~ 567 (667)
+.++||+||++|+++..++|...+..+.+.|.++++||||+|+|+.++.... ++++||||.+....+..+..+++++++
T Consensus 81 v~d~t~~eL~~l~~~~~~~~~~~~~~~~~~~~~~~~iptL~Evl~~~~~~~~-~~l~iEiK~~~~~~~~~~~~~~~~v~~ 159 (300)
T cd08604 81 TFDLTWSEIQTLKPAISNPYSVTGLFRNPANKNAGKFLTLSDFLDLAKNKSL-SGVLINVENAAYLAEKKGLDVVDAVLD 159 (300)
T ss_pred eecCcHHHHhhCccCCcCcccccCcCCCcccCCCCCCCCHHHHHHHHHhcCC-ceEEEEeeccchhhhccCccHHHHHHH
Confidence 9999999999999975433221123355667766899999999999987522 379999997654321123468999999
Q ss_pred HHHhcCCCCCCCceEEEEeCCHHHHHHHHhccCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCC-eeEEeCCC--CCcc
Q 005970 568 ALGNAGYNKQTALKVMIQSTDSSVLMKLREKTSYELVYKVKENIRDALNQTIEDIKKFADSVVLT-MSLYLKRG--TSSQ 644 (667)
Q Consensus 568 ~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~-~~i~~~~~--~~~~ 644 (667)
+|+++++.....++++|+||++++|++++++.+++++++++....+.....+.++..+|++++++ ..+.+... +...
T Consensus 160 ~l~~~~~~~~~~~~v~i~SF~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~v~~~~~~~~~~~~~~~~~~ 239 (300)
T cd08604 160 ALTNAGYDNQTAQKVLIQSTDSSVLAAFKKQISYERVYVVDETIRDASDSSIEEIKKFADAVVIDRGSVFPVSTSFLTRQ 239 (300)
T ss_pred HHHHcCCCCCCCCeEEEEcCCHHHHHHHHhccCCceEEEecCcccccChhHHHHHHHhccEEEeChhhcccccCCcccCc
Confidence 99999985311148999999999999999998889999987433233333455666677777776 44433221 2234
Q ss_pred HHHHHHHHHcCCcEEEEeccCC
Q 005970 645 TQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 645 ~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
+++|+++|++|++|++||||++
T Consensus 240 ~~~v~~a~~~Gl~v~vwTvn~~ 261 (300)
T cd08604 240 TNVVEKLQSANLTVYVEVLRNE 261 (300)
T ss_pred hHHHHHHHHCCCEEEEEEecCC
Confidence 5899999999999999999985
No 10
>cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv
Probab=100.00 E-value=5.7e-45 Score=382.70 Aligned_cols=254 Identities=47% Similarity=0.703 Sum_probs=200.1
Q ss_pred eeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCcccc-ccccccCCCc
Q 005970 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTT-IPEIMAGSGI 486 (667)
Q Consensus 408 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~-~~~~~~~~g~ 486 (667)
|+||||||+++.+||||++||++|+++|||+||||||+||||++||+||.+|+|+||+... |+.|+.+ ..++.+++|+
T Consensus 1 p~iiaHRG~~~~~PENTl~Af~~A~~~Gad~IE~DV~lTkDg~lVv~HD~~l~rtt~~~~~-~~~~~~~~~~~~~~~~g~ 79 (302)
T cd08571 1 PLVIARGGASGDYPDSTDLAYQKAISDGADVLDCDVQLTKDGVPICLPSINLDNSTTIASV-FPKRKKTYVVEGQSTSGI 79 (302)
T ss_pred CeEEeCCCcCCCCCcchHHHHHHHHHcCCCEEEeeeeEcCCCcEEEeCCchhcCCcccccc-cccccceecccCcccCCe
Confidence 5799999999999999999999999999999999999999999999999999999996643 6666554 5566678887
Q ss_pred ccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHH
Q 005970 487 FSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVM 566 (667)
Q Consensus 487 ~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~ 566 (667)
+|.++||+||++|+++....+. ...+++.|.++++||||+|+|++++..+ .++++||||.+.+.....+.++++.++
T Consensus 80 ~v~d~T~aeL~~l~~~~~~~~~--~~~~~~~~~~~~~IptL~evl~~~~~~~-~~~l~iEiK~~~~~~~~~~~~~~~~v~ 156 (302)
T cd08571 80 FSFDLTWAEIQTLKPIISNPFS--VLFRNPRNDNAGKILTLEDFLTLAKPKS-LSGVWINVENAAFLAEHKGLLSVDAVL 156 (302)
T ss_pred eeeeCCHHHHhhCcccccCccc--ccCCCcccCCCCCcCCHHHHHHhhhccC-CceEEEEccCchhhhhhccccHHHHHH
Confidence 7999999999999986432210 0124556666679999999999998752 237999999866432112346889999
Q ss_pred HHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc---cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCC-eeEEeCC---
Q 005970 567 EALGNAGYNKQTALKVMIQSTDSSVLMKLREK---TSYELVYKVKENIRDALNQTIEDIKKFADSVVLT-MSLYLKR--- 639 (667)
Q Consensus 567 ~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~---p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~-~~i~~~~--- 639 (667)
++|+++++... .++++|+|||+++|++++++ |.++++++++....+.....+.++..||.+++++ ..+.+..
T Consensus 157 ~~l~~~~~~~~-~~~v~i~SF~~~~L~~~~~~~~~p~v~~~~l~~~~~~~~~~~~l~~~~~~a~~v~~~~~~~~~~~~~~ 235 (302)
T cd08571 157 TSLSKAGYDQT-AKKVYISSPDSSVLKSFKKRVGTKLVFRVLDVDDTEPDTLLSNLTEIKKFASGVLVPKSYIWPVDSDS 235 (302)
T ss_pred HHHHHcCCCCC-CCCEEEeCCCHHHHHHHHhccCCCceEEEeecCCCcCCCChhHHHHHHHhcCccccChhHeeecCCCC
Confidence 99999988521 15899999999999999997 7888888876422112234566777889988887 5555421
Q ss_pred CCCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 640 GTSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 640 ~~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
.....+++|+++|++|++|++||||++
T Consensus 236 ~~~~~~~~V~~ah~~Gl~V~~wTvn~~ 262 (302)
T cd08571 236 FLTPQTSVVQDAHKAGLEVYVSGFANE 262 (302)
T ss_pred cccCccHHHHHHHHcCCEEEEEEEecC
Confidence 133346899999999999999999986
No 11
>cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI),
Probab=100.00 E-value=6.6e-45 Score=382.58 Aligned_cols=274 Identities=30% Similarity=0.402 Sum_probs=203.1
Q ss_pred CEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCc
Q 005970 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (667)
Q Consensus 92 ~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g 171 (667)
|+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+||+...++.. |....|
T Consensus 1 p~iiAHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~r~t~~~~~~~~~-------~~~~~~ 71 (296)
T cd08559 1 PLVIAHRGASGYAPEHTLAAYALAIEMGAD--YIEQDLVMTKDGVLVARHDPTLDRTTNVAEHFPFR-------GRKDTG 71 (296)
T ss_pred CeEEEeCCcCCCCccchHHHHHHHHHhCCC--EEEEeeEEccCCCEEEeccchhhcCCCcccccccc-------ccCCCC
Confidence 689999999999999999999999999999 99999999999999999999999999976544432 334455
Q ss_pred cccccCCHHhhccccccccccC----CCCCCCCCCCccCCHHHHHHhhCC--------CceEEeccCchhhhhcCCcHHH
Q 005970 172 WFSIDYTLNDLSNIILNQGVYS----RTDKFDGNGFQILTVQDMARQIKP--------PGLWLNIQHDAFYAQHNLSMRS 239 (667)
Q Consensus 172 ~~v~d~t~~el~~l~~~~~~~~----~~~~~~~~~~~iptL~e~l~~~~~--------~~~~ieiK~~~~~~~~~~~~~~ 239 (667)
+.|.++||+||++++++.|+.. +.+.+.. +++||||+|+|++++. .+++||||.+.........+++
T Consensus 72 ~~v~~~t~~eL~~l~~~~~~~~~~~~~~~~~~~-~~~iptL~evl~~~~~~~~~~~~~~~l~IEiK~~~~~~~~~~~~~~ 150 (296)
T cd08559 72 YFVIDFTLAELKTLRAGSWFNQRYPERAPSYYG-GFKIPTLEEVIELAQGLNKSTGRNVGIYPETKHPTFHKQEGPDIEE 150 (296)
T ss_pred eeeecCcHHHHhcCCCCCcccccccccCccccC-CCCcCCHHHHHHHHHhhhhccCCcceEEEEecChhhhhhcCCCHHH
Confidence 6899999999999999977522 1111222 4699999999999854 5799999976543333457889
Q ss_pred HHHHHHhhcCC------ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhh--cHHHHHhhcceec
Q 005970 240 FVLSVSRSVVV------NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLK--NLTFIKTFASGIL 311 (667)
Q Consensus 240 ~l~~~l~~~~~------~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~--~l~~i~~~a~~i~ 311 (667)
.++++++++++ ++|+||++.+|+++++.. | +.++++.+.............|.++.. .+..++.++.+++
T Consensus 151 ~v~~~l~~~~~~~~~~~v~i~SF~~~~L~~~r~~~-p-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 228 (296)
T cd08559 151 KLLEVLKKYGYTGKNDPVFIQSFEPESLKRLRNET-P-DIPLVQLIDYGDWAETDKKYTYAWLTTDAGLKEIAKYADGIG 228 (296)
T ss_pred HHHHHHHHcCCCCCCCCEEEecCCHHHHHHHHHhC-C-CCcEEEEecCCCCCccccccccchhcCHHHHHHHHHHhhhhC
Confidence 99999999864 489999999999999986 3 678886432211100001122333321 3445555677888
Q ss_pred CCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCC-CCcccCCCCChHHHHHHHHhC-CCcccceEecCCC
Q 005970 312 VPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFAND-IPISFNYSYDPLTEYLSFIDN-GDFSVDGVLSDFP 385 (667)
Q Consensus 312 ~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~-~~~~~~~~~d~~~e~~~li~~-G~~gVDGIiTD~P 385 (667)
+.+..+..... .....++.+|+.+|++|++|++||||++ .+..+ +..++|.+++++ | |||||||+|
T Consensus 229 ~~~~~~~~~~~-~~~~~~~~~v~~a~~~Gl~v~~WTvn~~~~~~~~----~~~~~~~~l~~~~G---VdgIiTD~P 296 (296)
T cd08559 229 PWKSLIIPEDS-NGLLVPTDLVKDAHKAGLLVHPYTFRNENLFLAP----DFKQDMDALYNAAG---VDGVFTDFP 296 (296)
T ss_pred CCHHhcccccc-ccccCchHHHHHHHHcCCEEEEEEecCccccccc----ccccCHHHHHHHhC---CCEEEcCCC
Confidence 87665542211 1123347899999999999999999975 22222 224678999987 7 999999998
No 12
>cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.
Probab=100.00 E-value=1.2e-43 Score=373.97 Aligned_cols=252 Identities=27% Similarity=0.367 Sum_probs=199.9
Q ss_pred eeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCc-cCCcccc-ccccccCCC
Q 005970 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSK-FNSITTT-IPEIMAGSG 485 (667)
Q Consensus 408 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~-~~~~~~~-~~~~~~~~g 485 (667)
|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+||+...+ |++|+++ ..++.+..|
T Consensus 1 p~iiAHRG~~~~~PENTl~Af~~A~~~Gad~iE~DVqlTkDg~lVv~HD~~l~rtt~~~~~~~~~~r~~~~~i~~~~~~~ 80 (309)
T cd08602 1 PLVIAHRGASGYRPEHTLAAYQLAIEQGADFIEPDLVSTKDGVLICRHEPELSGTTDVADHPEFADRKTTKTVDGVNVTG 80 (309)
T ss_pred CeEEecCCCCCCCCccHHHHHHHHHHcCCCEEEEeeeECCCCcEEEeCCCccccccCccccccccccccccccCCcccCC
Confidence 57999999999999999999999999999999999999999999999999999999986654 8888765 234444566
Q ss_pred cccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcC----CcceEEEEeecchhhhhhhcccH
Q 005970 486 IFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNAN----SLSGVLISIENAVYLAEKQGMSV 561 (667)
Q Consensus 486 ~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~----~~~~l~iEiK~~~~~~~~~~~~~ 561 (667)
.+|.++|++||++|+++.+++. +++.|.+.++||||+|+|++++..+ +.++++||||.+.......+..+
T Consensus 81 ~~v~d~t~~eL~~l~~~~~~~~------~~~~~~~~~~iptL~Evl~~~~~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~ 154 (309)
T cd08602 81 WFTEDFTLAELKTLRARQRLPY------RDQSYDGQFPIPTFEEIIALAKAASAATGRTVGIYPEIKHPTYFNAPLGLPM 154 (309)
T ss_pred eeeccCCHHHHhhCccCCcCcc------cCcccCCCcCcCCHHHHHHHHHhhhhcccccceeEEeecCchhcccccCCCH
Confidence 5699999999999999876532 2345666579999999999998642 12589999997654321134579
Q ss_pred HHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhccCCcEEEEeccchh---h------------hhHHHHHHHHHhh
Q 005970 562 TNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREKTSYELVYKVKENIR---D------------ALNQTIEDIKKFA 626 (667)
Q Consensus 562 ~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~p~~~~~~L~~~~~~---~------------~~~~~l~~~~~~a 626 (667)
+++|+++|+++++... .++++|+|||+++|++++++.++++++|++.... + ..+..++++..++
T Consensus 155 ~~~v~~~l~~~~~~~~-~~~v~i~SFd~~~L~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd08602 155 EDKLLETLKKYGYTGK-KAPVFIQSFEVTNLKYLRNKTDLPLVQLIDDATIPPQDTPEGDSRTYADLTTDAGLKEIATYA 233 (309)
T ss_pred HHHHHHHHHHcCCCCC-CCCEEEECCCHHHHHHHHhhhCCCeEEEecCCCCCcccccccCccchhhhcCHHHHHHHHhhc
Confidence 9999999999998631 1489999999999999999878899999864211 0 2234556666788
Q ss_pred hhcCCC-eeEEeCCC---CCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 627 DSVVLT-MSLYLKRG---TSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 627 ~~i~~~-~~i~~~~~---~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
++++++ ..+.+... ...++++|+++|++|++|++||||++
T Consensus 234 ~~i~~~~~~~~~~~~~~~~~~~~~~v~~a~~~gl~v~~wTvn~~ 277 (309)
T cd08602 234 DGIGPWKDLIIPSDANGRLGTPTDLVEDAHAAGLQVHPYTFRNE 277 (309)
T ss_pred eEEecchheEEecCCCCcccCccHHHHHHHHcCCEEEEEEecCC
Confidence 888887 55554321 33456999999999999999999985
No 13
>cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.
Probab=100.00 E-value=2.6e-44 Score=369.30 Aligned_cols=244 Identities=18% Similarity=0.187 Sum_probs=177.8
Q ss_pred CEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCc
Q 005970 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (667)
Q Consensus 92 ~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g 171 (667)
|+||||||+++.+||||++||+.|+++|+| +||+|||+||||++||+||.+|+|+||+.
T Consensus 1 p~viaHRG~~~~~PENTl~Af~~A~~~G~d--~iE~DV~lTkDg~lVv~HD~~l~R~t~~~------------------- 59 (263)
T cd08580 1 PLIVAHRGGTADAPENTLLAISKALANGAD--AIWLTVQLSKDGVPVLYRPSDLKSLTNGS------------------- 59 (263)
T ss_pred CeEEEcCCCCCCCCccHHHHHHHHHHcCCC--EEEEEeEECCCCCEEEeCCCchhcccCCC-------------------
Confidence 689999999999999999999999999999 99999999999999999999999999943
Q ss_pred cccccCCHHhhccccccccccCC-CCCCCCCCCccCCHHHHHHhhCCCceEEeccCchhhhhcCCcHHHHHHHHHhhcCC
Q 005970 172 WFSIDYTLNDLSNIILNQGVYSR-TDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV 250 (667)
Q Consensus 172 ~~v~d~t~~el~~l~~~~~~~~~-~~~~~~~~~~iptL~e~l~~~~~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~~ 250 (667)
+.|.++||+||++|+++.|+... +..|.+.+++||||+|+|+++++..++||+|.+.. ..+++.++++++++++
T Consensus 60 g~v~~~t~~el~~ld~g~~~~~~~~~~~~~~~~~iPtL~evl~~~~~~~l~iEiK~~~~-----~~~~~~v~~~i~~~~~ 134 (263)
T cd08580 60 GAVSAYTAAQLATLNAGYNFKPEGGYPYRGKPVGIPTLEQVLRAFPDTPFILDMKSLPA-----DPQAKAVARVLERENA 134 (263)
T ss_pred CChhhCcHHHHhcCCCccccccccCcccCCCCCcCccHHHHHHhhcCCeEEEEECCCCc-----HHHHHHHHHHHHhcCC
Confidence 27999999999999999887422 22355545689999999999988889999996531 1577889999999876
Q ss_pred c---eEecCCHHHHHHHHhhhCCCC-------CceEEEeccCCccCC-C-CCcchhH-----HhhcHHHHHhhcceecCC
Q 005970 251 N---YISSPEVNFLRSIAARFRPSM-------TKLVFRFLGKSEIEP-T-TNQTYGS-----LLKNLTFIKTFASGILVP 313 (667)
Q Consensus 251 ~---~i~SFd~~~L~~l~~~~~~~~-------~~~~~~l~~~~~~~~-~-~~~~y~~-----~~~~l~~i~~~a~~i~~~ 313 (667)
. +++|||+..|+++++.. | + .... ++....... . ....... +...+.....++.+.
T Consensus 135 ~~~v~v~SF~~~~l~~~~~~~-p-~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 207 (263)
T cd08580 135 WSRVRIYSTNADYQDALAPYP-Q-ARLFESRDVTRT--RLANVAMAHQCDLPPDSGAWAGFELRRKVTVVETFTLGE--- 207 (263)
T ss_pred CCCEEEEECCHHHHHHHHhcC-c-ccccccHHHHHH--HHHhhhcccccccCccchhhccccccccchheeeecccc---
Confidence 3 99999999999999884 2 1 1111 111000000 0 0000000 000011111111111
Q ss_pred CccccccCCCCCCCCChHHHHHHHHc-CCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCc
Q 005970 314 KDYIWPVDESLYLLPHTTIVLDAHKE-RLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTP 388 (667)
Q Consensus 314 ~~~~~~~~~~~~l~~~~~~v~~ah~~-Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~ 388 (667)
....+ .+...++++|+.+|++ |++|++||||++ ++|++++++| |||||||+|+.+
T Consensus 208 -~~~~~----~~~l~t~~~V~~~h~~~gl~V~~WTVN~~------------~~~~~l~~~G---VDgIiTD~P~~~ 263 (263)
T cd08580 208 -GRSPV----QATLWTPAAVDCFRRNSKVKIVLFGINTA------------DDYRLAKCLG---ADAVMVDSPAAM 263 (263)
T ss_pred -ccccc----ccccCCHHHHHHHHhcCCcEEEEEEeCCH------------HHHHHHHHcC---CCEEEeCCcccC
Confidence 11111 0122357899999999 999999999754 7899999888 999999999863
No 14
>cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation.
Probab=100.00 E-value=4.4e-43 Score=368.30 Aligned_cols=252 Identities=12% Similarity=0.046 Sum_probs=187.0
Q ss_pred ccccCCCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccc
Q 005970 84 WQTLTGDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYL 163 (667)
Q Consensus 84 ~~~~~~~~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~ 163 (667)
.+..-..+|.||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+||||+.+.++.+..
T Consensus 15 ~~~~~~~~~~IiAHRGa~~~aPENTl~AF~~A~~~Gad--~IE~DV~lTkDG~lVV~HD~tL~Rtt~~~~~~~~~~~--- 89 (316)
T cd08610 15 EKETLGPKPTIIGHRGAPMLAPENTMMSFEKAIEHGAH--GLETDVTLSYDGVPFLMHDFTLKRTTNIGEVQPESAC--- 89 (316)
T ss_pred cccccCCCCeEEECCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEEEccCCCEEEeCCCccccccCCCCccccccc---
Confidence 44444567899999999999999999999999999999 9999999999999999999999999997665554432
Q ss_pred cCCCCCCccccccCCHHhhccccccccccCCC-------------CCCCCCCCccCCHHHHHHhhCC--CceEEeccCch
Q 005970 164 VNGVPTPGWFSIDYTLNDLSNIILNQGVYSRT-------------DKFDGNGFQILTVQDMARQIKP--PGLWLNIQHDA 228 (667)
Q Consensus 164 ~~g~~~~g~~v~d~t~~el~~l~~~~~~~~~~-------------~~~~~~~~~iptL~e~l~~~~~--~~~~ieiK~~~ 228 (667)
+.|.++||+||++++++.||.... ..+.+ ++||||+|+|+++++ ..++||||.+.
T Consensus 90 --------~~V~~~TlaEL~~ld~g~wf~~~~~~~~~~~~~~~~~~~~~~--e~IPTLeEvL~~~~~~~~~l~IEIK~~~ 159 (316)
T cd08610 90 --------ENPAFFNWDFLSTLNAGKWFVKPRPFYNMKPLSEADKERARN--QSIPKLSNFLRLAEKENKLVIFDLYRPP 159 (316)
T ss_pred --------cchhhCCHHHHhhCCCCCccCcccccccccccccccccccCC--CCCCCHHHHHHHhHhcCceEEEEeCCCc
Confidence 269999999999999998873210 12334 699999999999964 56899999542
Q ss_pred hhhhcCCcHHHHHHHHH-hhcCCc--eEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHh
Q 005970 229 FYAQHNLSMRSFVLSVS-RSVVVN--YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT 305 (667)
Q Consensus 229 ~~~~~~~~~~~~l~~~l-~~~~~~--~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~ 305 (667)
........+++.++..+ +++++. ++.||+...++++++.. | +.+..+.. .. . +..+..
T Consensus 160 ~~~~~~~~~~~~v~~~i~~~~~~~~~~v~sf~~~~l~~~~~~~-P-~~~~~l~~--~~--------~-------~~~l~~ 220 (316)
T cd08610 160 PKHPYRHTWIRRVLEVILNEVGIEQHLVLWLPAHDRQYVQSVA-P-GFKQHVGR--KV--------P-------IETLLK 220 (316)
T ss_pred ccCcchhHHHHHHHHHHHHHcCCCCCEEEEcCHHHHHHHHHHC-c-chhhhhcc--cc--------c-------HHHHHH
Confidence 11111123566777775 566653 55679999999999885 3 34432100 00 0 112221
Q ss_pred -hcceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCC
Q 005970 306 -FASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDF 384 (667)
Q Consensus 306 -~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~ 384 (667)
.+.++++.+..+ ++++|+++|++|++|++||||+. ++|++++++| |||||||+
T Consensus 221 ~~~~~l~~~~~~l-----------~~~~v~~a~~~Gl~V~vWTVNd~------------~~~~~l~~~G---VDgIiTD~ 274 (316)
T cd08610 221 NNISILNLAYKKL-----------FSNDIRDYKAANIHTNVYVINEP------------WLFSLAWCSG---IHSVTTNN 274 (316)
T ss_pred cCCeEEccchhhC-----------CHHHHHHHHHCCCEEEEECCCCH------------HHHHHHHhCC---cCEEEeCC
Confidence 244455443222 46799999999999999999753 7899999888 99999999
Q ss_pred CCCchhhhhhh
Q 005970 385 PLTPSAAVDCF 395 (667)
Q Consensus 385 P~~~~~~l~~~ 395 (667)
|+.+.++.+..
T Consensus 275 P~~l~~~~~~~ 285 (316)
T cd08610 275 IHLLKQLDHPH 285 (316)
T ss_pred HHHHHHhhchh
Confidence 99886655443
No 15
>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=1.1e-42 Score=370.08 Aligned_cols=258 Identities=15% Similarity=0.194 Sum_probs=193.4
Q ss_pred cCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccC-cccccccCCCCc-cCCcccc-cccc
Q 005970 404 KSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFI-NLINSTNAAQSK-FNSITTT-IPEI 480 (667)
Q Consensus 404 ~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~-~L~r~t~v~~~~-~~~~~~~-~~~~ 480 (667)
..+.++||||||+++.+||||++||++|+++|||+||+|||+||||++||+||. +|+||||+...| |++|+++ ..++
T Consensus 13 ~~~~~~iIAHRGasg~~PEnTl~Af~~Ai~~Gad~IE~DV~lTkDg~lVV~HD~~~L~rtTnv~~~pe~a~r~~~~~~~g 92 (356)
T cd08560 13 FRKTDFSIGHRGAPLQFPEHTRESYEAAARMGAGILECDVTFTKDRELVCRHSQCDLHTTTNILAIPELAAKCTQPFTPA 92 (356)
T ss_pred CCCCceEEEcCCCCCCCCcchHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCccccCccCCccccchhhhcccccccc
Confidence 346789999999999999999999999999999999999999999999999997 899999998876 9888765 2233
Q ss_pred cc----CCCcccccCCHHHHcccCCCcc--CCcc--------cccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEE
Q 005970 481 MA----GSGIFSFSLIWDEIQTLIPQIS--NPYF--------KFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLIS 546 (667)
Q Consensus 481 ~~----~~g~~i~d~t~~EL~~L~~~~~--~p~~--------~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iE 546 (667)
.. ..+++|.|+||+||++|+++.. .++. .+...++..|.++++||||+|+|+++++.+ ++++||
T Consensus 93 ~~~~~~~~~~~v~d~TlaELk~L~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~IPTL~Evl~lv~~~~--v~l~iE 170 (356)
T cd08560 93 NATKPASAECCTSDITLAEFKSLCGKMDASNPSATTPEEYQNGTPDWRTDLYATCGTLMTHKESIALFKSLG--VKMTPE 170 (356)
T ss_pred ccccccccCcchhhCcHHHHhcCCCccccccccccccccccccccccccccccCCCCCCCHHHHHHHHHhcC--ceEEEE
Confidence 32 2234699999999999987531 1100 000123445555689999999999998752 589999
Q ss_pred eecchhhhhhhc----ccHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcE--EEEeccc----hhhhh
Q 005970 547 IENAVYLAEKQG----MSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYEL--VYKVKEN----IRDAL 615 (667)
Q Consensus 547 iK~~~~~~~~~~----~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~--~~L~~~~----~~~~~ 615 (667)
||.+.+.....+ ..++++++++++++++.. ++|+|||||++.|+++++. |++++ +++.+.. .....
T Consensus 171 iK~~~~~~~~~g~~~~~~~~~~l~~~l~~~g~~~---~~v~iqSFd~~~L~~~~~~~p~~~~~l~~l~~~~~~~~~~~~~ 247 (356)
T cd08560 171 LKSPSVPMPFDGNYTQEDYAQQMIDEYKEAGVPP---SRVWPQSFNLDDIFYWIKNEPDFGRQAVYLDDRDDTADFPATW 247 (356)
T ss_pred eCCCcccccccccccHHHHHHHHHHHHHHcCCCC---CCEEEECCCHHHHHHHHHhCCCCCeeEEEEccCCccccccccH
Confidence 998765221011 258899999999999862 5899999999999999998 98765 5544421 00011
Q ss_pred HHHHHHH-HHhhhhcCCC-eeEEeCC--CCCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 616 NQTIEDI-KKFADSVVLT-MSLYLKR--GTSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 616 ~~~l~~~-~~~a~~i~~~-~~i~~~~--~~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
...++++ ..+++.++|+ ..+.+.. ....++++|+.||++|++|++|||+++
T Consensus 248 ~~~l~~i~a~~a~~i~P~~~~l~~~~~~~~~~~~~~v~~Ah~~GL~V~~WTvr~~ 302 (356)
T cd08560 248 SPSMDELKARGVNIIAPPIWMLVDPDENGKIVPSEYAKAAKAAGLDIITWTLERS 302 (356)
T ss_pred HHHHHHHHhCCccEecCchhhccccccccccCCHHHHHHHHHcCCEEEEEEeecC
Confidence 2345555 5567788887 4444321 122467999999999999999999864
No 16
>cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=1.4e-42 Score=358.22 Aligned_cols=239 Identities=23% Similarity=0.290 Sum_probs=186.4
Q ss_pred EEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCcc
Q 005970 93 FVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGW 172 (667)
Q Consensus 93 ~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~ 172 (667)
+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|++.. + +
T Consensus 2 ~iiaHRG~~~~~pENT~~af~~A~~~G~d--~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~~-----------~------g 62 (256)
T cd08601 2 AVIAHRGASGYAPEHTFAAYDLAREMGAD--YIELDLQMTKDGVLVAMHDETLDRTTNIER-----------P------G 62 (256)
T ss_pred ceEEcCCCCCCCCCchHHHHHHHHHcCCC--EEEEEeeECCCCeEEEeCCCccccccCCCC-----------C------c
Confidence 58999999999999999999999999999 999999999999999999999999998510 0 3
Q ss_pred ccccCCHHhhccccccccccCC-----CCCCCCCCCccCCHHHHHHhhCC-CceEEeccCchhhhhcCCcHHHHHHHHHh
Q 005970 173 FSIDYTLNDLSNIILNQGVYSR-----TDKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSFVLSVSR 246 (667)
Q Consensus 173 ~v~d~t~~el~~l~~~~~~~~~-----~~~~~~~~~~iptL~e~l~~~~~-~~~~ieiK~~~~~~~~~~~~~~~l~~~l~ 246 (667)
.|+++||+||++++++.++... +..+. +++||||+|+|+++++ .+++||+|.+... ..+++.+.++++
T Consensus 63 ~v~~~t~~el~~l~~~~~~~~~~~~~~~~~~~--~~~iptL~evl~~~~~~~~l~IEiK~~~~~----~~~~~~v~~~l~ 136 (256)
T cd08601 63 PVKDYTLAEIKQLDAGSWFNKAYPEYARESYS--GLKVPTLEEVIERYGGRANYYIETKSPDLY----PGMEEKLLATLD 136 (256)
T ss_pred eeecCcHHHHHhcCCCccccccCccccccccC--CccCCCHHHHHHHhccCceEEEEeeCCCCC----CCHHHHHHHHHH
Confidence 7999999999999998775321 11233 3699999999999864 7899999965322 257788999999
Q ss_pred hcCC---------ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecCCCccc
Q 005970 247 SVVV---------NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYI 317 (667)
Q Consensus 247 ~~~~---------~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~~ 317 (667)
++++ ++++||++..|+++++.. | +.++++.+..... ...... .+..+..++.++++.+..
T Consensus 137 ~~~~~~~~~~~~~v~i~Sf~~~~l~~~~~~~-p-~~~~~~l~~~~~~-----~~~~~~---~~~~~~~~~~~~~~~~~~- 205 (256)
T cd08601 137 KYGLLTDNLKNGQVIIQSFSKESLKKLHQLN-P-NIPLVQLLWYGEG-----AETYDK---WLDEIKEYAIGIGPSIAD- 205 (256)
T ss_pred HcCCCcccCCCCCEEEecCCHHHHHHHHHhC-C-CCcEEEEeccCcc-----cccchh---HHHHHHhcCeEeCCchhh-
Confidence 8854 489999999999999986 3 5777763322110 000111 133344456666654322
Q ss_pred cccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhh
Q 005970 318 WPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAV 392 (667)
Q Consensus 318 ~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l 392 (667)
..+++++.+|++|++|++||||+ .++|++++++| |||||||+|+.+++++
T Consensus 206 ----------~~~~~v~~~~~~g~~v~~wTvn~------------~~~~~~l~~~G---vd~IiTD~p~~~~~~~ 255 (256)
T cd08601 206 ----------ADPWMVHLIHKKGLLVHPYTVNE------------KADMIRLINWG---VDGMFTNYPDRLKEVL 255 (256)
T ss_pred ----------cCHHHHHHHHHCCCEEEEEecCC------------HHHHHHHHhcC---CCEEEeCCHHHHHHhh
Confidence 14679999999999999999975 38899999887 9999999999887765
No 17
>cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo
Probab=100.00 E-value=1.9e-42 Score=355.68 Aligned_cols=232 Identities=14% Similarity=0.120 Sum_probs=176.4
Q ss_pred CCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCC
Q 005970 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (667)
Q Consensus 91 ~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~ 170 (667)
+|.||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+||||+.+.+|.+..
T Consensus 1 ~~~iiAHRG~~~~aPENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVV~HD~~l~Rtt~~~g~~~~~~~---------- 68 (252)
T cd08574 1 KPALIGHRGAPMLAPENTLMSFEKALEHGVY--GLETDVTISYDGVPFLMHDRTLRRTTNVADVFPERAH---------- 68 (252)
T ss_pred CCeEEecCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEeEccCCcEEEeCCCcccccCCCCcccccccc----------
Confidence 4789999999999999999999999999999 9999999999999999999999999997654443321
Q ss_pred ccccccCCHHhhccccccccccCCCC-------------CCCCCCCccCCHHHHHHhhC--CCceEEeccCchhhhhcCC
Q 005970 171 GWFSIDYTLNDLSNIILNQGVYSRTD-------------KFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNL 235 (667)
Q Consensus 171 g~~v~d~t~~el~~l~~~~~~~~~~~-------------~~~~~~~~iptL~e~l~~~~--~~~~~ieiK~~~~~~~~~~ 235 (667)
+.|.++||+||++|+++.||....+ .|.+ ++||||+|+|++++ +..++||||.+........
T Consensus 69 -~~v~~~T~~eL~~ld~g~~f~~~~~~~~~~~~~~~~~~~~~~--~~IPtL~evl~~~~~~~~~l~iEiK~~~~~~~~~~ 145 (252)
T cd08574 69 -ERASMFTWTDLQQLNAGQWFLKDDPFWTASSLSESDREEAGN--QSIPSLAELLRLAKKHNKSVIFDLRRPPPNHPYYQ 145 (252)
T ss_pred -cchhcCCHHHHhhCCCCCcccCCCccchhcccccchhhhcCC--CCCCCHHHHHHHHHHcCCeEEEEecCCcccCccHH
Confidence 2689999999999999998743222 3444 69999999999996 3679999996431111122
Q ss_pred cHHHHHHHHHhhcCCc---eEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHh-hcceec
Q 005970 236 SMRSFVLSVSRSVVVN---YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGIL 311 (667)
Q Consensus 236 ~~~~~l~~~l~~~~~~---~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~ 311 (667)
.+++.++++++++++. +++||+.. ++++++.. | +.++.+ + ... . ...+.. .+..++
T Consensus 146 ~~~~~v~~~l~~~~~~~~~v~~s~~~~-~~~~~~~~-p-~~~~~~-~-~~~--------~-------~~~~~~~~~~~~~ 205 (252)
T cd08574 146 SYVNITLDTILASGIPQHQVFWLPDEY-RALVRKVA-P-GFQQVS-G-RKL--------P-------VESLRENGISRLN 205 (252)
T ss_pred HHHHHHHHHHHHcCCCcccEEEccHHH-HHHHHHHC-C-CCeEee-c-ccc--------c-------hHHHHhcCCeEEc
Confidence 4778899999998863 56566654 78898885 3 455543 1 111 0 111111 244555
Q ss_pred CCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecC
Q 005970 312 VPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSD 383 (667)
Q Consensus 312 ~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD 383 (667)
+.+..+ ++.+|+.+|++|++|++||||+. .+|++++++| |||||||
T Consensus 206 ~~~~~~-----------~~~~v~~~~~~g~~v~~WTVn~~------------~~~~~l~~~G---VdgIiTD 251 (252)
T cd08574 206 LEYSQL-----------SAQEIREYSKANISVNLYVVNEP------------WLYSLLWCSG---VQSVTTN 251 (252)
T ss_pred cCcccC-----------CHHHHHHHHHCCCEEEEEccCCH------------HHHHHHHHcC---CCEEecC
Confidence 543322 46799999999999999999753 7899999887 9999999
No 18
>cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP
Probab=100.00 E-value=2e-42 Score=365.97 Aligned_cols=251 Identities=23% Similarity=0.270 Sum_probs=189.6
Q ss_pred eeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcc
Q 005970 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIF 487 (667)
Q Consensus 408 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~ 487 (667)
|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+||+.. .|++|++. .+.+ +
T Consensus 1 ~lviAHRG~s~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~-~~~~~~~~-----~g~~-~ 73 (318)
T cd08600 1 KIIIAHRGASGYLPEHTLEAKALAYAQGADYLEQDVVLTKDDKLVVIHDHYLDNVTNVAE-KFPDRKRK-----DGRY-Y 73 (318)
T ss_pred CeEEEcCCCCCCCCccHHHHHHHHHHcCCCEEEeeeeECcCCcEEEeCCchhhccCCccc-cccccccc-----CCce-e
Confidence 579999999999999999999999999999999999999999999999999999999653 25555432 1344 4
Q ss_pred cccCCHHHHcccCCCccCCcc-cccc----cCCCCCCCCccccCHHHHHHHHHhcC----CcceEEEEeecchhhhhhhc
Q 005970 488 SFSLIWDEIQTLIPQISNPYF-KFKL----FRNPKNKNAGKFMKLSDFLEMAKNAN----SLSGVLISIENAVYLAEKQG 558 (667)
Q Consensus 488 i~d~t~~EL~~L~~~~~~p~~-~~~~----~~~~~~~~~~~iPtL~EvL~~~~~~~----~~~~l~iEiK~~~~~~~~~~ 558 (667)
|.++||+||++|+++.++... +.+. .+.+.+.++++||||+|+|++++... ..++++||||.+.... ..+
T Consensus 74 v~dlT~aEL~~ld~g~~f~~~~~~~~~~~~~~~~~~~~~~~IptL~evl~~~~~~~~~~~~~~~l~iEiK~~~~~~-~~~ 152 (318)
T cd08600 74 VIDFTLDELKSLSVTERFDIENGKKVQVYPNRFPLWKSDFKIHTLEEEIELIQGLNKSTGKNVGIYPEIKAPWFHH-QEG 152 (318)
T ss_pred EeeCcHHHHhhCCCCCCcccccccccccccccCcccCCCCccCCHHHHHHHHHHhhhhcCCcceEEEeecCchhhh-hcc
Confidence 999999999999999764210 0000 00111123479999999999997621 1257999999765321 123
Q ss_pred ccHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHh-c-c----CCcEEEEecc-chhh-----------------h
Q 005970 559 MSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLRE-K-T----SYELVYKVKE-NIRD-----------------A 614 (667)
Q Consensus 559 ~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~-~-p----~~~~~~L~~~-~~~~-----------------~ 614 (667)
.++++.++++|+++++... .++|+|+||++++|+++|+ + | ++++++|+.. .+.. .
T Consensus 153 ~~~~~~v~~~l~~~~~~~~-~~~v~i~SF~~~~L~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (318)
T cd08600 153 KDIAAATLEVLKKYGYTSK-NDKVYLQTFDPNELKRIKNELLPKMGMDLKLVQLIAYTDWGETQEKDPGGWVNYDYDWMF 231 (318)
T ss_pred ccHHHHHHHHHHHcCCCCC-CCeEEEEeCCHHHHHHHHHhhCccccCCcceEEEeccCCCCcccccccCCccccchhhhc
Confidence 4699999999999998631 1589999999999999997 7 9 9999999852 1110 0
Q ss_pred hHHHHHHHHHhhhhcCCC-eeEEeCC---CCCccHHHHHHHHHcCCcEEEEeccCCC
Q 005970 615 LNQTIEDIKKFADSVVLT-MSLYLKR---GTSSQTQLWRSTHITRELVLMELLQNSL 667 (667)
Q Consensus 615 ~~~~l~~~~~~a~~i~~~-~~i~~~~---~~~~~~~~v~~ah~~Gl~V~vWTVn~e~ 667 (667)
+...+.++..+|+.++++ ..+.+.. ....++++|+.+|++|+.|++||||++.
T Consensus 232 ~~~~l~~~~~~a~~i~~~~~~l~~~~~~~~~~~~~~~V~~ah~~Gl~V~~wTvn~~~ 288 (318)
T cd08600 232 TKGGLKEIAKYADGVGPWYSMIIEEKSSKGNIVLTDLVKDAHEAGLEVHPYTVRKDA 288 (318)
T ss_pred CHHHHHHHHHhheeccCCHHHcccccCCCCccChHHHHHHHHHcCCEEEEEeccCCc
Confidence 223466777889998888 4443311 1224568999999999999999999973
No 19
>cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI),
Probab=100.00 E-value=2.3e-42 Score=363.33 Aligned_cols=248 Identities=26% Similarity=0.304 Sum_probs=182.7
Q ss_pred eeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcc
Q 005970 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIF 487 (667)
Q Consensus 408 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~ 487 (667)
|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+||.... ++.+ +....+..
T Consensus 1 p~iiAHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~r~t~~~~~-~~~~------~~~~~~~~ 73 (296)
T cd08559 1 PLVIAHRGASGYAPEHTLAAYALAIEMGADYIEQDLVMTKDGVLVARHDPTLDRTTNVAEH-FPFR------GRKDTGYF 73 (296)
T ss_pred CeEEEeCCcCCCCccchHHHHHHHHHhCCCEEEEeeEEccCCCEEEeccchhhcCCCcccc-cccc------ccCCCCee
Confidence 5799999999999999999999999999999999999999999999999999999984321 1110 11122235
Q ss_pred cccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcC----CcceEEEEeecchhhhhhhcccHHH
Q 005970 488 SFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNAN----SLSGVLISIENAVYLAEKQGMSVTN 563 (667)
Q Consensus 488 i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~----~~~~l~iEiK~~~~~~~~~~~~~~~ 563 (667)
|.++||+||++|+++.++.-. + ..+.+.+..+++||||+|+|+.++..+ +.++++||||.+.... ..+..+++
T Consensus 74 v~~~t~~eL~~l~~~~~~~~~-~-~~~~~~~~~~~~iptL~evl~~~~~~~~~~~~~~~l~IEiK~~~~~~-~~~~~~~~ 150 (296)
T cd08559 74 VIDFTLAELKTLRAGSWFNQR-Y-PERAPSYYGGFKIPTLEEVIELAQGLNKSTGRNVGIYPETKHPTFHK-QEGPDIEE 150 (296)
T ss_pred eecCcHHHHhcCCCCCccccc-c-cccCccccCCCCcCCHHHHHHHHHhhhhccCCcceEEEEecChhhhh-hcCCCHHH
Confidence 999999999999998653100 0 011222233589999999999998732 1258999999765421 12357899
Q ss_pred HHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhh-----------hhHHHHHHHHHhhhhcCC
Q 005970 564 SVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRD-----------ALNQTIEDIKKFADSVVL 631 (667)
Q Consensus 564 ~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~-----------~~~~~l~~~~~~a~~i~~ 631 (667)
.|+++|+++++... .++++|+|||+++|+++|++ |++++++|+...... .....+..+..++..+++
T Consensus 151 ~v~~~l~~~~~~~~-~~~v~i~SF~~~~L~~~r~~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 229 (296)
T cd08559 151 KLLEVLKKYGYTGK-NDPVFIQSFEPESLKRLRNETPDIPLVQLIDYGDWAETDKKYTYAWLTTDAGLKEIAKYADGIGP 229 (296)
T ss_pred HHHHHHHHcCCCCC-CCCEEEecCCHHHHHHHHHhCCCCcEEEEecCCCCCccccccccchhcCHHHHHHHHHHhhhhCC
Confidence 99999999987521 15899999999999999999 999999998642110 122334455556777777
Q ss_pred C-eeEEeCC--CCCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 632 T-MSLYLKR--GTSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 632 ~-~~i~~~~--~~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
. ..+.... ....++++|+++|++|++|++||||+|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~v~~a~~~Gl~v~~WTvn~~ 267 (296)
T cd08559 230 WKSLIIPEDSNGLLVPTDLVKDAHKAGLLVHPYTFRNE 267 (296)
T ss_pred CHHhccccccccccCchHHHHHHHHcCCEEEEEEecCc
Confidence 6 3332110 112336999999999999999999983
No 20
>cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia
Probab=100.00 E-value=3.1e-42 Score=362.10 Aligned_cols=244 Identities=12% Similarity=0.107 Sum_probs=183.8
Q ss_pred CCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCC
Q 005970 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (667)
Q Consensus 91 ~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~ 170 (667)
.|.||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+||||+.+.++...
T Consensus 26 ~~~IIAHRGas~~aPENTl~AF~~Ai~~GaD--~IE~DV~lTkDG~lVV~HD~tL~Rtt~~~g~~~~~~----------- 92 (315)
T cd08609 26 KPALVGHRGAPMLAPENTLMSLRKSLECGVV--VFETDVMVSKDGVPFLMHDEGLLRTTNVKDVFPGRD----------- 92 (315)
T ss_pred CCeEEECCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEEECCCCCEEEeCCCcccccCCCCCCccccc-----------
Confidence 4799999999999999999999999999999 999999999999999999999999999654221110
Q ss_pred ccccccCCHHhhccccccccccCCCC-------------CCCCCCCccCCHHHHHHhhCC--CceEEeccCchhhhhcCC
Q 005970 171 GWFSIDYTLNDLSNIILNQGVYSRTD-------------KFDGNGFQILTVQDMARQIKP--PGLWLNIQHDAFYAQHNL 235 (667)
Q Consensus 171 g~~v~d~t~~el~~l~~~~~~~~~~~-------------~~~~~~~~iptL~e~l~~~~~--~~~~ieiK~~~~~~~~~~ 235 (667)
.+.|.++||+||++++++.||..+.+ .+. +++||||+|+|+++++ ..++||||.+........
T Consensus 93 ~~~V~dlTlaEL~~ld~g~wf~~~~~~~~~~~~~~~~~~~~~--ge~IPTL~EvL~~~~~~~~~l~IEIK~~~~~~~~~~ 170 (315)
T cd08609 93 AAGSNNFTWTELKTLNAGSWFLERRPFWTLSSLSEEDRREAD--NQTVPSLSELLDLAKKHNVSIMFDLRNENNSHVFYS 170 (315)
T ss_pred cccHhhCCHHHHhhCCCCcccCcccccccccccccccccccC--CCCCCCHHHHHHHHHhcCCEEEEEeCCCCCCCccHH
Confidence 12599999999999999988743211 123 3699999999999864 569999995421111123
Q ss_pred cHHHHHHHHHhhcCCc--eEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecCC
Q 005970 236 SMRSFVLSVSRSVVVN--YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVP 313 (667)
Q Consensus 236 ~~~~~l~~~l~~~~~~--~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~ 313 (667)
.+...++++++++++. .+.+|+...++.+++.. | +.+.++.. . .......+..+++.
T Consensus 171 ~f~~~vl~~i~~~~~~~~~v~~~~~~~l~~~~~~~-P-~~~~~~~~---~----------------~~~~~~~~~~i~~~ 229 (315)
T cd08609 171 SFVFYTLETILKLGIPPDKVWWLPDEYRHDVMKME-P-GFKQVYGR---Q----------------KEMLMDGGNFMNLP 229 (315)
T ss_pred HHHHHHHHHHHHcCCCcceEEEeCHHHHHHHHHhC-c-Cceeeccc---c----------------hhhHhcCCeEEecc
Confidence 5678889999999853 33456788999999885 2 45544211 0 00011124444443
Q ss_pred CccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhhh
Q 005970 314 KDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVD 393 (667)
Q Consensus 314 ~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~ 393 (667)
+..+ +.++|+.+|++|++|++||||++ ++|++++++| |||||||+|+.+.+.++
T Consensus 230 ~~~l-----------~~~~v~~~~~~G~~v~vWTVNd~------------~~~~~l~~~G---VDgIiTD~P~~l~~~~~ 283 (315)
T cd08609 230 YQDL-----------SALEIKELRKDNVSVNLWVVNEP------------WLFSLLWCSG---VSSVTTNACQLLKDMSK 283 (315)
T ss_pred cccC-----------CHHHHHHHHHCCCEEEEECCCCH------------HHHHHHHhcC---CCEEEcCCHHHHHHhhh
Confidence 3221 46799999999999999999753 7899999888 99999999998888876
Q ss_pred hhh
Q 005970 394 CFA 396 (667)
Q Consensus 394 ~~~ 396 (667)
.+.
T Consensus 284 ~~~ 286 (315)
T cd08609 284 PIW 286 (315)
T ss_pred hhh
Confidence 653
No 21
>PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional
Probab=100.00 E-value=6.1e-42 Score=351.77 Aligned_cols=231 Identities=15% Similarity=0.129 Sum_probs=174.1
Q ss_pred CCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCC
Q 005970 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (667)
Q Consensus 91 ~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~ 170 (667)
.|.||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|+|++.
T Consensus 7 ~~~iiaHRG~~~~~pENT~~Af~~A~~~G~d--~vE~DV~lT~Dg~lVV~HD~~l~R~t~~~------------------ 66 (249)
T PRK09454 7 YPRIVAHRGGGKLAPENTLAAIDVGARYGHR--MIEFDAKLSADGEIFLLHDDTLERTSNGW------------------ 66 (249)
T ss_pred CCeEEECCCCCCCCChHHHHHHHHHHHcCCC--EEEEEeeECCCCCEEEECCCcccccCCCC------------------
Confidence 5899999999999999999999999999999 99999999999999999999999999953
Q ss_pred ccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhC--CCceEEeccCchhhhhcCCcHHHHHHHHHhhc
Q 005970 171 GWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV 248 (667)
Q Consensus 171 g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~--~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~ 248 (667)
+.|.++||+||++++++.++ ...|.+ ++||||+|+|++++ +..++||+|...... ......+..+++..
T Consensus 67 -~~v~~~t~~el~~l~~~~~~---~~~~~~--~~iPtL~evl~~~~~~~~~l~iEiK~~~~~~---~~~~~~v~~~~~~~ 137 (249)
T PRK09454 67 -GVAGELTWQDLAQLDAGSWF---SAAFAG--EPLPTLSQVAARCRAHGMAANIEIKPTTGRE---AETGRVVALAARAL 137 (249)
T ss_pred -CchhhCCHHHHHhcCCCCcc---CCCCCC--CcCCCHHHHHHHHHhcCCEEEEEECCCCCcc---hhHHHHHHHHHHHH
Confidence 27999999999999998875 344555 69999999999985 467899999432111 11222233333322
Q ss_pred -----CCceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhh-cceecCCCccccccCC
Q 005970 249 -----VVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF-ASGILVPKDYIWPVDE 322 (667)
Q Consensus 249 -----~~~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~~~~~~~ 322 (667)
+..+++||++..|+++++.. | +.++.+.. ... +..+ ...+.+. +..+++.+..
T Consensus 138 ~~~~~~~v~v~SF~~~~l~~l~~~~-p-~~~~~~l~-~~~------~~~~------~~~~~~~~~~~~~~~~~~------ 196 (249)
T PRK09454 138 WAGAAVPPLLSSFSEDALEAARQAA-P-ELPRGLLL-DEW------PDDW------LELTRRLGCVSLHLNHKL------ 196 (249)
T ss_pred hcCCCCCEEEEeCCHHHHHHHHHhC-C-CCcEEEEe-ccc------cccH------HHHHHhcCCeEEeccccc------
Confidence 23589999999999999986 3 57777533 111 0111 1111111 2233433221
Q ss_pred CCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhh
Q 005970 323 SLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAA 391 (667)
Q Consensus 323 ~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~ 391 (667)
.++.+++.+|++|++|++||||++ .+|++++++| |||||||+|+.+...
T Consensus 197 -----~~~~~v~~~~~~g~~v~~WTvn~~------------~~~~~l~~~G---VdgIiTD~p~~~~~~ 245 (249)
T PRK09454 197 -----LDEARVAALKAAGLRILVYTVNDP------------ARARELLRWG---VDCICTDRIDLIGPD 245 (249)
T ss_pred -----CCHHHHHHHHHCCCEEEEEeCCCH------------HHHHHHHHcC---CCEEEeCChHhcCcc
Confidence 257899999999999999999753 7899999888 999999999976544
No 22
>cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti
Probab=100.00 E-value=3.1e-42 Score=365.50 Aligned_cols=242 Identities=13% Similarity=0.105 Sum_probs=181.1
Q ss_pred CCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCC
Q 005970 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (667)
Q Consensus 91 ~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~ 170 (667)
+|+||||||+++.+||||++||++|++.||| +||+|||+||||++||+||.+|+||||+.+.++.++..
T Consensus 1 ~p~IIAHRGas~~aPENTL~AF~~A~~~GaD--~IElDV~lTkDGvlVV~HD~tL~RtTn~~g~v~~~~~~--------- 69 (351)
T cd08608 1 KPAIIGHRGAPMLAPENTLMSFQKALEQKVY--GLQADVTISLDGVPFLMHDRTLRRTTNVDRVFPERQYE--------- 69 (351)
T ss_pred CCeEEEcCCCCCCCCcchHHHHHHHHHcCCC--EEEEEeeEccCCcEEEECCCccccccCCCCcccccccc---------
Confidence 4789999999999999999999999999999 99999999999999999999999999977655544322
Q ss_pred ccccccCCHHhhccccccccccCCCC-------------CCCCCCCccCCHHHHHHhhCC--CceEEeccCchhhhhcCC
Q 005970 171 GWFSIDYTLNDLSNIILNQGVYSRTD-------------KFDGNGFQILTVQDMARQIKP--PGLWLNIQHDAFYAQHNL 235 (667)
Q Consensus 171 g~~v~d~t~~el~~l~~~~~~~~~~~-------------~~~~~~~~iptL~e~l~~~~~--~~~~ieiK~~~~~~~~~~ 235 (667)
.++++||+||++|+++.|+..+.+ .+.| ++||||+|+|+++++ ..++||||.+........
T Consensus 70 --~~~~~TlaEL~~LdaG~wf~~~~p~~~~~~~~~~~~~~~~g--e~IPTL~EvL~~~~~~~~~l~iEIK~~~~~~~~~~ 145 (351)
T cd08608 70 --DASMFNWTDLERLNAGQWFLKDDPFWTAQSLSPSDRKEAGN--QSVCSLAELLELAKRYNASVLLNLRRPPPNHPYHQ 145 (351)
T ss_pred --ccccCCHHHHhhCCCCcccccCCccccccccccccccccCC--CCCCCHHHHHHHHHhcCCeEEEEECCCcccCcchh
Confidence 578999999999999988743221 3334 699999999999964 568999995421111113
Q ss_pred cHHHHHHHHHhhcCCc----eEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHH-hhccee
Q 005970 236 SMRSFVLSVSRSVVVN----YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIK-TFASGI 310 (667)
Q Consensus 236 ~~~~~l~~~l~~~~~~----~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~-~~a~~i 310 (667)
.+++.+++++.+++.. +++||+. ++++++.. | +.+.. . ... . .+..+. ..+.++
T Consensus 146 ~~~~~v~~~i~~~~~~~~~vi~sSf~~--~~~vr~l~-P-~~~~~--~-~~~--------~------~~~~~~~~~~~~l 204 (351)
T cd08608 146 SWINLTLKTILASGIPQEQVMWTPDWQ--RKLVRKVA-P-GFQQT--S-GEK--------L------PVASLRERGITRL 204 (351)
T ss_pred HHHHHHHHHHHHhCCCcCeEEEEcchH--HHHHHHHC-C-CCeee--c-ccc--------c------hHHHHHHcCCeEE
Confidence 4667788888887752 5678766 46788875 3 34432 1 000 0 011121 124455
Q ss_pred cCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchh
Q 005970 311 LVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSA 390 (667)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~ 390 (667)
++.+..+ ++++|+.+|++|++|++||||++ .+|+.++++| |||||||+|+.+.+
T Consensus 205 ~~~~~~l-----------t~~~v~~~~~~Gl~V~vWTVN~~------------~~~~~l~~~G---VdgIiTD~P~~l~~ 258 (351)
T cd08608 205 NLRYTQA-----------SAQEIRDYSASNLSVNLYTVNEP------------WLYSLLWCSG---VPSVTSDASHVLRK 258 (351)
T ss_pred ccchhhc-----------CHHHHHHHHHCCCEEEEEecCCH------------HHHHHHHHCC---CCEEEECCHHHHHH
Confidence 5544322 46799999999999999999753 7899999888 99999999998877
Q ss_pred hhhh
Q 005970 391 AVDC 394 (667)
Q Consensus 391 ~l~~ 394 (667)
+..-
T Consensus 259 l~~~ 262 (351)
T cd08608 259 VPFP 262 (351)
T ss_pred hhhh
Confidence 6543
No 23
>cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family.
Probab=100.00 E-value=9.1e-42 Score=359.45 Aligned_cols=255 Identities=17% Similarity=0.177 Sum_probs=181.0
Q ss_pred CCCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCC
Q 005970 88 TGDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGV 167 (667)
Q Consensus 88 ~~~~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~ 167 (667)
...+|.||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|+|++.
T Consensus 23 ~~~~~~iiAHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDG~lVV~HD~~l~Rtt~~~--------------- 85 (300)
T cd08612 23 SPFPCRHISHRGGSGENLENTMEAFEHAVKVGTD--MLELDVHLTKDGQVVVSHDENLLRSCGVD--------------- 85 (300)
T ss_pred cCCCCCEEECCCCCCCCCccHHHHHHHHHHcCCC--EEEEEeeECcCCeEEEECCccccccCCCC---------------
Confidence 3457899999999999999999999999999999 99999999999999999999999999943
Q ss_pred CCCccccccCCHHhhcccccccccc-----CCCCCCCCCCCccCCHHHHHHhhCCCceEEeccCchhhhhcCCcHHHHHH
Q 005970 168 PTPGWFSIDYTLNDLSNIILNQGVY-----SRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQHNLSMRSFVL 242 (667)
Q Consensus 168 ~~~g~~v~d~t~~el~~l~~~~~~~-----~~~~~~~~~~~~iptL~e~l~~~~~~~~~ieiK~~~~~~~~~~~~~~~l~ 242 (667)
+.|+++||+||++++++..+. .++..|.| ++||||+|+|+++++..++||||.+. ..+++.++
T Consensus 86 ----g~V~~~t~~eL~~l~~~~~~~~~~~~~~~~~~~g--~~IPtL~EvL~~~~~~~lnIEiK~~~------~~~~~~v~ 153 (300)
T cd08612 86 ----KLVSDLNYADLPPYLEKLEVTFSPGDYCVPKGSD--RRIPLLEEVFEAFPDTPINIDIKVEN------DELIKKVS 153 (300)
T ss_pred ----cccccCCHHHHhhccccccccccCCccccccCCC--CCCCCHHHHHHhCCCCeEEEEECCCc------hHHHHHHH
Confidence 279999999999995543210 11234444 69999999999998889999999642 13678899
Q ss_pred HHHhhcCC---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCC---------ccCCCCCcchhHHhhcHHH--HHhhcc
Q 005970 243 SVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKS---------EIEPTTNQTYGSLLKNLTF--IKTFAS 308 (667)
Q Consensus 243 ~~l~~~~~---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~y~~~~~~l~~--i~~~a~ 308 (667)
+++++++. ++++|||++.|+++++.. | ++++.+ +.... ...+..+.....+...... +..+..
T Consensus 154 ~~i~~~~~~~~v~isSF~~~~L~~~~~~~-p-~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (300)
T cd08612 154 DLVRKYKREDITVWGSFNDEIVKKCHKEN-P-NIPLFF-SLKRVLLLLLLYYTGLLPFIPIKESFLEIPMPSIFLKTYFP 230 (300)
T ss_pred HHHHHcCCCCcEEEEeCCHHHHHHHHHhC-C-CccEEe-chHHHHHHHHHHHcccCccccCccccccccchhhhhhhccc
Confidence 99998876 399999999999999985 3 566654 21100 0000000000000000000 000000
Q ss_pred e--ecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCC
Q 005970 309 G--ILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPL 386 (667)
Q Consensus 309 ~--i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~ 386 (667)
. .........+. .+...++++|+.+|++|++|++||||++ ++|++++++| |||||||+|+
T Consensus 231 ~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~G~~v~vWTVNd~------------~~~~~l~~~G---VdgIiTD~P~ 292 (300)
T cd08612 231 KSMSRLNRFVLFLI---DWLLMRPSLFRHLQKRGIQVYGWVLNDE------------EEFERAFELG---ADGVMTDYPT 292 (300)
T ss_pred ccccccccceeccc---ccccCCHHHHHHHHHCCCEEEEeecCCH------------HHHHHHHhcC---CCEEEeCCHH
Confidence 0 00000001110 0122357899999999999999999753 8899999887 9999999999
Q ss_pred Cchhhh
Q 005970 387 TPSAAV 392 (667)
Q Consensus 387 ~~~~~l 392 (667)
.+.+++
T Consensus 293 ~l~~~l 298 (300)
T cd08612 293 KLREFL 298 (300)
T ss_pred HHHHHH
Confidence 877665
No 24
>cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=1.1e-41 Score=345.29 Aligned_cols=221 Identities=15% Similarity=0.200 Sum_probs=162.2
Q ss_pred EEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCccc
Q 005970 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (667)
Q Consensus 94 iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~~ 173 (667)
||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|++. +.
T Consensus 1 iiaHRG~~~~~PENTl~Af~~A~~~gad--~iE~DV~lTkDg~~Vv~HD~~l~r~t~~~-------------------~~ 59 (229)
T cd08581 1 LVAHRGYPARYPENTLVGFRAAVDAGAR--FVEFDVQLSADGVPVVFHDDTLLRLTGVE-------------------GL 59 (229)
T ss_pred CEeCCCCCCCCCccHHHHHHHHHHcCCC--EEEEeeeECCCCcEEEECCCccccccCCC-------------------ce
Confidence 6899999999999999999999999999 99999999999999999999999999943 27
Q ss_pred cccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCC---CceEEeccCchhhhhcCCcHHHHHHHHHhhc--
Q 005970 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP---PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV-- 248 (667)
Q Consensus 174 v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~---~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~-- 248 (667)
|.++||+||++++++... .++..|.+ ++||||+|+|+++++ .+++||+|.+.... ..+.+.+..+++..
T Consensus 60 v~~~t~~el~~l~~~~~~-~~~~~~~~--~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~---~~~~~~v~~~~~~~~~ 133 (229)
T cd08581 60 LHELEDAELDSLRVAEPA-RFGSRFAG--EPLPSLAAVVQWLAQHPQVTLFVEIKTESLDR---FGLERVVDKVLRALPA 133 (229)
T ss_pred eccCCHHHHhhcccccCc-ccccccCC--ccCCCHHHHHHHHhhCCCceEEEEecCCcccc---cchhHHHHHHHHHHHh
Confidence 999999999999764321 12345555 699999999999854 57999999654221 12233334444433
Q ss_pred --CCceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHh-hcceecCCCccccccCCCCC
Q 005970 249 --VVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDYIWPVDESLY 325 (667)
Q Consensus 249 --~~~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~~~~~~~~~~ 325 (667)
...+++|||+..|+++++. + ..++.+.+ ... . . .. ...... .+..+.+.+.
T Consensus 134 ~~~~~~i~SF~~~~l~~~r~~--~-~~~~~~l~-~~~--~---~---~~----~~~~~~~~~~~~~~~~~---------- 187 (229)
T cd08581 134 VAAQRVLISFDYDLLALAKQQ--G-GPRTGWVL-PDW--D---D---AS----LAEADELQPDYLFCDKN---------- 187 (229)
T ss_pred ccCCeEEEeCCHHHHHHHHhc--C-CCCeEEEe-ccC--C---h---HH----HHHHHhhCCCEEecccc----------
Confidence 3358999999999999998 2 46666532 111 0 0 00 011111 1222222111
Q ss_pred CCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCC
Q 005970 326 LLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (667)
Q Consensus 326 l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P 385 (667)
+ ...++.+|++|++|++||||++ ++|++++++| |||||||+|
T Consensus 188 ~---~~~v~~~~~~G~~v~vWTVn~~------------~~~~~l~~~G---VdgiiTD~P 229 (229)
T cd08581 188 L---LPDTGDLWAGTWKWVIYEVNEP------------AEALALAARG---VALIETDNI 229 (229)
T ss_pred c---ChhhHHHHhCCceEEEEEcCCH------------HHHHHHHHhC---CcEEEcCCC
Confidence 1 1358889999999999999754 7899999888 999999998
No 25
>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.
Probab=100.00 E-value=3.1e-41 Score=341.75 Aligned_cols=202 Identities=18% Similarity=0.200 Sum_probs=161.2
Q ss_pred eEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCccc
Q 005970 409 LVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIFS 488 (667)
Q Consensus 409 ~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~i 488 (667)
+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|| ++|. |
T Consensus 1 ~iiaHRG~~~~~pENTl~af~~A~~~Gad~iE~DV~lT~Dg~~Vv~HD~~l~R~t~------------------~~g~-v 61 (226)
T cd08568 1 IILGHRGYRAKYPENTLEAFKKAIEYGADGVELDVWLTKDGKLVVLHDENLKRVGG------------------VDLK-V 61 (226)
T ss_pred CEEeccCCCCCCCcchHHHHHHHHHcCcCEEEEEEEEcCCCCEEEECCCcccccCC------------------CCce-e
Confidence 48999999999999999999999999999999999999999999999999999999 7776 9
Q ss_pred ccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHHH
Q 005970 489 FSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEA 568 (667)
Q Consensus 489 ~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~ 568 (667)
.++||+||++++++ +++||||+|||+.+++. ..++||||.+ ..++.++++
T Consensus 62 ~~~t~~eL~~l~~~------------------g~~iPtL~evl~~~~~~---~~l~iEiK~~---------~~~~~~~~~ 111 (226)
T cd08568 62 KELTYKELKKLHPG------------------GELIPTLEEVFRALPND---AIINVEIKDI---------DAVEPVLEI 111 (226)
T ss_pred ecCCHHHHhhCCCC------------------CCcCCCHHHHHHhcCCC---cEEEEEECCc---------cHHHHHHHH
Confidence 99999999999875 27899999999999764 4799999964 245789999
Q ss_pred HHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHh--hhhcCCCeeEEeCCCCCccH
Q 005970 569 LGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKF--ADSVVLTMSLYLKRGTSSQT 645 (667)
Q Consensus 569 l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~--a~~i~~~~~i~~~~~~~~~~ 645 (667)
++++++. ++++++|||+++|++++++ |+++++++++....... ...+.+. +..+++............++
T Consensus 112 l~~~~~~----~~v~i~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (226)
T cd08568 112 VEKFNAL----DRVIFSSFNHDALRELRKLDPDAKVGLLIGEEEEGFS---IPELHEKLKLYSLHVPIDAIGYIGFEKFV 184 (226)
T ss_pred HHHcCCC----CcEEEEECCHHHHHHHHHhCCCCcEEEEeeccccccC---HHHHHHhcCCcEeccchhhhccccccccH
Confidence 9999887 7999999999999999999 99999999864211000 0011111 11222210000000111246
Q ss_pred HHHHHHHHcCCcEEEEeccCC
Q 005970 646 QLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 646 ~~v~~ah~~Gl~V~vWTVn~e 666 (667)
++|+.+|++|++|++||||++
T Consensus 185 ~~v~~~~~~G~~v~~WTvn~~ 205 (226)
T cd08568 185 ELLRLLRKLGLKIVLWTVNDP 205 (226)
T ss_pred HHHHHHHHCCCEEEEEcCCCH
Confidence 999999999999999999974
No 26
>cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=7.1e-41 Score=340.55 Aligned_cols=228 Identities=16% Similarity=0.118 Sum_probs=172.6
Q ss_pred EEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCccc
Q 005970 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (667)
Q Consensus 94 iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~~ 173 (667)
||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|+|++. +.
T Consensus 1 iiaHRG~~~~~pENTl~af~~A~~~G~d--~iE~DV~~TkDg~~Vv~HD~~l~r~t~~~-------------------g~ 59 (235)
T cd08565 1 IAGHRGGRNLWPENTLEGFRKALELGVD--AVEFDVHLTADGEVVVIHDPTLDRTTHGT-------------------GA 59 (235)
T ss_pred CEecCCCCCCCCccHHHHHHHHHHcCCC--EEEEeEEEccCCCEEEECCChhhcccCCC-------------------Cc
Confidence 6899999999999999999999999999 99999999999999999999999999843 26
Q ss_pred cccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhC--CCceEEeccCchhhhhcCCcHHHHHHHHHhhcCCc
Q 005970 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVVN 251 (667)
Q Consensus 174 v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~--~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~~~ 251 (667)
|.++||+||++|+++.++ +++||||+|+|++++ +..++||+|.+... .....+++.++++++++++.
T Consensus 60 v~~~t~~el~~l~~~~~~----------~~~iptL~evl~~~~~~~~~l~iEiK~~~~~-~~~~~~~~~v~~~i~~~~~~ 128 (235)
T cd08565 60 VRDLTLAERKALRLRDSF----------GEKIPTLEEVLALFAPSGLELHVEIKTDADG-TPYPGAAALAAATLRRHGLL 128 (235)
T ss_pred eeeccHHHHhcCCCCCCC----------CCCCCCHHHHHHHhhccCcEEEEEECCCCCC-CccHHHHHHHHHHHHhCCCc
Confidence 999999999999998753 359999999999985 46799999964210 01124778899999998763
Q ss_pred ---eEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHH-HhhcceecCCCccccccCCCCCCC
Q 005970 252 ---YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFI-KTFASGILVPKDYIWPVDESLYLL 327 (667)
Q Consensus 252 ---~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i-~~~a~~i~~~~~~~~~~~~~~~l~ 327 (667)
+++||++..|+++++. + +.++.+ +.......... .+. .+... ...+..+++..... .
T Consensus 129 ~~v~~~Sf~~~~l~~~~~~-p--~~~~~~-l~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~---------~ 189 (235)
T cd08565 129 ERSVLTSFDPAVLTEVRKH-P--GVRTLG-SVDEDMLERLG--GEL----PFLTATALKAHIVAVEQSLL---------A 189 (235)
T ss_pred CCEEEEECCHHHHHHHHhC-C--CCcEEE-Eeccccccccc--ccc----chhhhhhccCcEEccCcccc---------c
Confidence 9999999999999998 4 577775 33211100000 000 00011 11233333332210 1
Q ss_pred CChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCc
Q 005970 328 PHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTP 388 (667)
Q Consensus 328 ~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~ 388 (667)
....+|+.+|+ |++|++||||++ ++|++++++| |||||||+|+.+
T Consensus 190 ~~~~~v~~~~~-g~~v~~WTVn~~------------~~~~~l~~~G---VdgIiTD~P~~~ 234 (235)
T cd08565 190 ATWELVRAAVP-GLRLGVWTVNDD------------SLIRYWLACG---VRQLTTDRPDLA 234 (235)
T ss_pred CCHHHHHHHhC-CCEEEEEccCCH------------HHHHHHHHcC---CCEEEeCCcccc
Confidence 24678999974 999999999753 7899999888 999999999865
No 27
>cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG)
Probab=100.00 E-value=1.4e-40 Score=337.71 Aligned_cols=222 Identities=19% Similarity=0.214 Sum_probs=173.9
Q ss_pred EEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCccc
Q 005970 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (667)
Q Consensus 94 iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~~ 173 (667)
||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|+|++. +.
T Consensus 1 iiaHRG~~~~~pENT~~af~~A~~~gad--~iE~Dv~~TkDg~lvv~HD~~l~r~t~~~-------------------~~ 59 (229)
T cd08562 1 IIAHRGASSLAPENTLAAFRAAAELGVR--WVEFDVKLSGDGTLVLIHDDTLDRTTNGS-------------------GA 59 (229)
T ss_pred CEeCCCCCCCCCchHHHHHHHHHHcCCC--EEEEEEeECCCCCEEEEcCCCCccccCCC-------------------ce
Confidence 6899999999999999999999999999 99999999999999999999999999943 27
Q ss_pred cccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhC--CCceEEeccCchhhhhcCCcHHHHHHHHHhhcCC-
Q 005970 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV- 250 (667)
Q Consensus 174 v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~--~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~~- 250 (667)
|+++||+||++++.+.++ .+.|.+ .+||||+|+|++++ +..++||+|.+... ...+++.+.+++++++.
T Consensus 60 i~~lt~~el~~l~~~~~~---~~~~~~--~~iptl~evl~~~~~~~~~l~iEiK~~~~~---~~~~~~~v~~~l~~~~~~ 131 (229)
T cd08562 60 VTELTWAELAQLDAGSWF---SPEFAG--EPIPTLADVLELARELGLGLNLEIKPDPGD---EALTARVVAAALRELWPH 131 (229)
T ss_pred eecCcHHHHhhcCCCccc---CCCCCC--CCCCCHHHHHHHHHhcCCEEEEEECCCCCc---cHHHHHHHHHHHHHhcCC
Confidence 999999999999988764 334444 59999999999995 46799999965321 23466778888888865
Q ss_pred ---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhh-cceecCCCccccccCCCCCC
Q 005970 251 ---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF-ASGILVPKDYIWPVDESLYL 326 (667)
Q Consensus 251 ---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~~~~~~~~~~l 326 (667)
++++||+++.|+++++.. | ..++.+.. ... +... ...+... +..+.+.+..
T Consensus 132 ~~~v~~~Sf~~~~l~~~~~~~-p-~~~~~~l~-~~~------~~~~------~~~~~~~~~~~~~~~~~~---------- 186 (229)
T cd08562 132 ASKLLLSSFSLEALRAARRAA-P-ELPLGLLF-DTL------PADW------LELLAALGAVSIHLNYRG---------- 186 (229)
T ss_pred cCCEEEECCCHHHHHHHHHhC-C-CCcEEEEe-cCC------CcCH------HHHHHHcCCeEEecChhh----------
Confidence 389999999999999985 3 56666522 111 0111 1111111 3334443221
Q ss_pred CCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCC
Q 005970 327 LPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (667)
Q Consensus 327 ~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P 385 (667)
.+..+|+.+|++|++|++||+|++ ++++.++++| |||||||+|
T Consensus 187 -~~~~~v~~~~~~g~~v~~wTvn~~------------~~~~~~~~~g---VdgiiTD~p 229 (229)
T cd08562 187 -LTEEQVKALKDAGYKLLVYTVNDP------------ARAAELLEWG---VDAIFTDRP 229 (229)
T ss_pred -CCHHHHHHHHHCCCEEEEEeCCCH------------HHHHHHHHCC---CCEEEcCCC
Confidence 246799999999999999999754 7899999888 999999998
No 28
>cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4.
Probab=100.00 E-value=8.6e-41 Score=345.94 Aligned_cols=245 Identities=21% Similarity=0.218 Sum_probs=175.5
Q ss_pred CEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCc
Q 005970 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (667)
Q Consensus 92 ~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g 171 (667)
|+||||||+++.+||||++||+.|+++|+| +||+|||+||||++||+||.+++|+|++.
T Consensus 1 p~iiaHRG~~~~~pENTl~af~~A~~~G~d--~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~------------------- 59 (264)
T cd08575 1 PLHIAHRGGAAEFPENTIAAFRHAVKNGAD--MLELDVQLTKDGQVVVFHDWDLDRLTGGS------------------- 59 (264)
T ss_pred CeEEEeCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEEECCCCCEEEEcCCcccceeCCc-------------------
Confidence 689999999999999999999999999999 99999999999999999999999999943
Q ss_pred cccccCCHHhhccccccccccCCC------CCCCCCCCccCCHHHHHHhhCCCceEEeccCchhhhhcCCcHHHHHHHHH
Q 005970 172 WFSIDYTLNDLSNIILNQGVYSRT------DKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQHNLSMRSFVLSVS 245 (667)
Q Consensus 172 ~~v~d~t~~el~~l~~~~~~~~~~------~~~~~~~~~iptL~e~l~~~~~~~~~ieiK~~~~~~~~~~~~~~~l~~~l 245 (667)
+.|+++|++||++++++.++...+ ..+. +.+||||+|+|+.+++..++||+|.+.. ..+++.+++++
T Consensus 60 ~~v~~~t~~el~~l~~~~~~~~~~~~~~~~~~~~--~~~iptL~evl~~~~~~~l~iEiK~~~~-----~~~~~~v~~~i 132 (264)
T cd08575 60 GLVSDLTYAELPPLDAGYGYTFDGGKTGYPRGGG--DGRIPTLEEVFKAFPDTPINIDIKSPDA-----EELIAAVLDLL 132 (264)
T ss_pred eEEecCCHHHHHhcccCCccccCCCCcccccCCC--CCcCCcHHHHHHhCCCCeEEEEECCCCH-----HHHHHHHHHHH
Confidence 279999999999999987653211 1122 4699999999999988889999996532 25778899999
Q ss_pred hhcCCc---eEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecCCCc-------
Q 005970 246 RSVVVN---YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKD------- 315 (667)
Q Consensus 246 ~~~~~~---~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~------- 315 (667)
+++++. +++||++..|+++++.. | +.++.+.. ......... ..+.... .....+..+..+.+...
T Consensus 133 ~~~~~~~~~~~~Sf~~~~l~~~~~~~-p-~~~~~~~~-~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 207 (264)
T cd08575 133 EKYKREDRTVWGSTNPEYLRALHPEN-P-NLFESFSM-TRCLLLYLA-LGYTGLL-PFVPIKESFFEIPRPVIVLETFTL 207 (264)
T ss_pred HhccccceEEEEeCCHHHHHHHHHhC-c-ccccccCc-hhHHHHHHH-hheeccC-CCCCCCceEEEeecccEEEEEecc
Confidence 988763 99999999999999985 3 34333211 000000000 0000000 00000000011111100
Q ss_pred ---cccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCc
Q 005970 316 ---YIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTP 388 (667)
Q Consensus 316 ---~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~ 388 (667)
.+.+ .+...++++|+.+|++|++|++||||+. .+|++++++| |||||||+|+.+
T Consensus 208 ~~~~~~~----~~~~~~~~~v~~~~~~G~~v~vWTVNd~------------~~~~~l~~~G---VdgIiTD~P~~~ 264 (264)
T cd08575 208 GEGASIV----AALLWWPNLFDHLRKRGIQVYLWVLNDE------------EDFEEAFDLG---ADGVMTDSPTKL 264 (264)
T ss_pred ccccchh----hhhhcCHHHHHHHHhcCCcEEEEEECCH------------HHHHHHHhcC---CCEEEeCCcccC
Confidence 0000 0112357899999999999999999754 7899999888 999999999853
No 29
>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional
Probab=100.00 E-value=1.4e-40 Score=355.34 Aligned_cols=256 Identities=22% Similarity=0.274 Sum_probs=189.6
Q ss_pred cccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccc
Q 005970 402 ASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIM 481 (667)
Q Consensus 402 ~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~ 481 (667)
..+..+|+||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|+... .|+++.+.
T Consensus 21 ~~~~~~pliiAHRGas~~~PENTl~Af~~A~~~GaD~IE~DV~lTkDg~lVv~HD~~l~rtT~~~~-~~~~~~~~----- 94 (355)
T PRK11143 21 AADSAEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDQLVVLHDHYLDRVTDVAE-RFPDRARK----- 94 (355)
T ss_pred hhcCCCcEEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEeeeEccCCcEEEeCCchhcccCCccc-cccccccc-----
Confidence 346778999999999999999999999999999999999999999999999999999999999553 36665432
Q ss_pred cCCCcccccCCHHHHcccCCCccCCcc-ccc----ccCCCCCCCCccccCHHHHHHHHHhcC----CcceEEEEeecchh
Q 005970 482 AGSGIFSFSLIWDEIQTLIPQISNPYF-KFK----LFRNPKNKNAGKFMKLSDFLEMAKNAN----SLSGVLISIENAVY 552 (667)
Q Consensus 482 ~~~g~~i~d~t~~EL~~L~~~~~~p~~-~~~----~~~~~~~~~~~~iPtL~EvL~~~~~~~----~~~~l~iEiK~~~~ 552 (667)
.+.+ +|.++||+||++|+++.++... +.. ..+.+.+..+++||||+|+|++++..+ ..++++||||.+..
T Consensus 95 ~g~~-~v~dlT~aEL~~ld~~~~f~~~~g~~~~~~~~~~~~~~~~~~IPTL~Evl~~~~~~~~~~~~~~~l~IEiK~~~~ 173 (355)
T PRK11143 95 DGRY-YAIDFTLDEIKSLKFTEGFDIENGKKVQVYPGRFPMGKSDFRVHTFEEEIEFIQGLNHSTGKNIGIYPEIKAPWF 173 (355)
T ss_pred CCce-eEeeCcHHHHhhCCCCCCcccccccccccccccccccCCCCccCCHHHHHHHHHHhhhhcCCCceeeEeccCccc
Confidence 1334 4999999999999998643100 000 011122223589999999999998631 12579999998654
Q ss_pred hhhhhcccHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHh-c-cC----CcEEEEecc-chhh------------
Q 005970 553 LAEKQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLRE-K-TS----YELVYKVKE-NIRD------------ 613 (667)
Q Consensus 553 ~~~~~~~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~-~-p~----~~~~~L~~~-~~~~------------ 613 (667)
.. ..+.+++++|+++|+++++... .++++|+|||+++|+++++ + |+ +++++++.. .+..
T Consensus 174 ~~-~~~~~~~~~v~~~l~~~g~~~~-~~~v~i~SFd~~~L~~~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 251 (355)
T PRK11143 174 HH-QEGKDIAAKVLEVLKKYGYTGK-DDKVYLQCFDANELKRIKNELEPKMGMDLKLVQLIAYTDWNETQEKQPDGKWVN 251 (355)
T ss_pred cc-ccchhHHHHHHHHHHHhCCCCC-CCCEEEeCCCHHHHHHHHhhcCccccCCcceEEEeccCCCcccccccccCcccc
Confidence 21 1235689999999999998521 1589999999999999998 6 87 488888742 1100
Q ss_pred --h----hHHHHHHHHHhhhhcCCC-eeEEeC---CCCCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 614 --A----LNQTIEDIKKFADSVVLT-MSLYLK---RGTSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 614 --~----~~~~l~~~~~~a~~i~~~-~~i~~~---~~~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
. +...+.++..++..++|+ ..+... +...+++++|+++|++|++|++||||++
T Consensus 252 ~~~~~~~~~~~~~~~~~~a~~i~p~~~~l~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTVn~~ 314 (355)
T PRK11143 252 YNYDWMFKPGAMKEVAKYADGIGPDYHMLVDETSTPGNIKLTGMVKEAHQAKLVVHPYTVRAD 314 (355)
T ss_pred cchhhhcChhhHHHHHhhceeecCChhheeeccccCCccChHHHHHHHHHcCCEEEEEEeccc
Confidence 0 112345566678888877 333321 1234567999999999999999999974
No 30
>cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo
Probab=100.00 E-value=6e-41 Score=344.64 Aligned_cols=226 Identities=20% Similarity=0.220 Sum_probs=164.7
Q ss_pred ceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCc
Q 005970 407 NLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGI 486 (667)
Q Consensus 407 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~ 486 (667)
++.||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+||... .++++ ..+
T Consensus 1 ~~~iiAHRG~~~~aPENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVV~HD~~l~Rtt~~~g-~~~~~---------~~~- 69 (252)
T cd08574 1 KPALIGHRGAPMLAPENTLMSFEKALEHGVYGLETDVTISYDGVPFLMHDRTLRRTTNVAD-VFPER---------AHE- 69 (252)
T ss_pred CCeEEecCCCCCCCCccHHHHHHHHHHcCCCEEEEEEeEccCCcEEEeCCCcccccCCCCc-ccccc---------ccc-
Confidence 3689999999999999999999999999999999999999999999999999999999321 11111 123
Q ss_pred ccccCCHHHHcccCCCccCCc----cccc-c--cCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcc
Q 005970 487 FSFSLIWDEIQTLIPQISNPY----FKFK-L--FRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGM 559 (667)
Q Consensus 487 ~i~d~t~~EL~~L~~~~~~p~----~~~~-~--~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~ 559 (667)
.|.++||+||++|++|.++.. ..+. . +....|.+ ++||||+|+|+++++.+ ..++||||.+.... ....
T Consensus 70 ~v~~~T~~eL~~ld~g~~f~~~~~~~~~~~~~~~~~~~~~~-~~IPtL~evl~~~~~~~--~~l~iEiK~~~~~~-~~~~ 145 (252)
T cd08574 70 RASMFTWTDLQQLNAGQWFLKDDPFWTASSLSESDREEAGN-QSIPSLAELLRLAKKHN--KSVIFDLRRPPPNH-PYYQ 145 (252)
T ss_pred chhcCCHHHHhhCCCCCcccCCCccchhcccccchhhhcCC-CCCCCHHHHHHHHHHcC--CeEEEEecCCcccC-ccHH
Confidence 389999999999999976410 0000 0 00113454 89999999999998752 37999999753100 0123
Q ss_pred cHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeC
Q 005970 560 SVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLK 638 (667)
Q Consensus 560 ~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~ 638 (667)
.++++++++|+++++. ++++++||+.. ++.++++ |+++++++..... ..+.. +++. .+.+.
T Consensus 146 ~~~~~v~~~l~~~~~~----~~~v~~s~~~~-~~~~~~~~p~~~~~~~~~~~~--------~~~~~----~~~~-~~~~~ 207 (252)
T cd08574 146 SYVNITLDTILASGIP----QHQVFWLPDEY-RALVRKVAPGFQQVSGRKLPV--------ESLRE----NGIS-RLNLE 207 (252)
T ss_pred HHHHHHHHHHHHcCCC----cccEEEccHHH-HHHHHHHCCCCeEeeccccch--------HHHHh----cCCe-EEccC
Confidence 5889999999999986 46667666654 8999999 9999987543211 11111 2221 22221
Q ss_pred CCCCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 639 RGTSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 639 ~~~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
. ...++++|+.+|++|++|++||||++
T Consensus 208 ~-~~~~~~~v~~~~~~g~~v~~WTVn~~ 234 (252)
T cd08574 208 Y-SQLSAQEIREYSKANISVNLYVVNEP 234 (252)
T ss_pred c-ccCCHHHHHHHHHCCCEEEEEccCCH
Confidence 1 12356999999999999999999974
No 31
>cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G
Probab=100.00 E-value=1.9e-40 Score=341.89 Aligned_cols=215 Identities=16% Similarity=0.233 Sum_probs=169.2
Q ss_pred EEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcccc
Q 005970 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIFSF 489 (667)
Q Consensus 410 iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~i~ 489 (667)
||||||+++.+||||++||++|++.|||+||||||+||||++||+||.+|+|+|| ++|. |.
T Consensus 1 iiaHRG~~~~~pENTl~af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~l~R~t~------------------~~g~-v~ 61 (258)
T cd08573 1 IIGHRGAGHDAPENTLAAFRQAKKNGADGVEFDLEFTKDGVPVLMHDDTVDRTTD------------------GTGL-VA 61 (258)
T ss_pred CEecCCCCCCCCccHHHHHHHHHHcCCCEEEEEeeECCCCcEEEECCCCcceecC------------------CCce-Ee
Confidence 6899999999999999999999999999999999999999999999999999999 6775 99
Q ss_pred cCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHHHH
Q 005970 490 SLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEAL 569 (667)
Q Consensus 490 d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l 569 (667)
++||+||++|+++.+++. ...|.+ ++||||+|+|+.+++.. +.++||||.+.. .++++++++|
T Consensus 62 ~~t~~el~~l~~~~~~~~-------~~~~~~-~~iptL~evl~~~~~~~--~~l~iEiK~~~~-------~~~~~v~~~l 124 (258)
T cd08573 62 ELTWEELRKLNAAAKHRL-------SSRFPG-EKIPTLEEAVKECLENN--LRMIFDVKSNSS-------KLVDALKNLF 124 (258)
T ss_pred cCcHHHHhhCCCCCCCCC-------ccccCC-CCCCCHHHHHHHHHhcC--CEEEEEeCCCcH-------HHHHHHHHHH
Confidence 999999999999876532 234554 89999999999998642 479999997542 5778999999
Q ss_pred HhcC-CCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhh------------hH----HHHHHHHHh------
Q 005970 570 GNAG-YNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDA------------LN----QTIEDIKKF------ 625 (667)
Q Consensus 570 ~~~~-~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~------------~~----~~l~~~~~~------ 625 (667)
++++ +. ++++|+||++++|++++++ |+++++++++...... .. ..+..+..+
T Consensus 125 ~~~~~~~----~~v~v~SF~~~~l~~~~~~~p~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (258)
T cd08573 125 KKYPGLY----DKAIVCSFNPIVIYKVRKADPKILTGLTWRPWFLSYTDDEGGPRRKSGWKHFLYSMLDVILEWSLHSWL 200 (258)
T ss_pred HHCCCcc----CCEEEEECCHHHHHHHHHhCCCceEEEecCcchhcccccccCcccchHHHHHHHHHHHHHHHHHHHhhh
Confidence 9998 76 7999999999999999999 9999999985311000 00 001101101
Q ss_pred hhhcCCCeeEEeCCCCCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 626 ADSVVLTMSLYLKRGTSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 626 a~~i~~~~~i~~~~~~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
+..+++. .+.+. ....++++|+.+|++|++|++||||++
T Consensus 201 ~~~~~~~-~v~~~-~~~~~~~~v~~~~~~G~~v~vWTVn~~ 239 (258)
T cd08573 201 PYFLGVS-ALLIH-KDDISSAYVRYWRARGIRVIAWTVNTP 239 (258)
T ss_pred hhhcCee-EEEec-hHhcCHHHHHHHHHCCCEEEEEecCCH
Confidence 0122332 22222 222457999999999999999999974
No 32
>cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.
Probab=100.00 E-value=2e-41 Score=347.94 Aligned_cols=217 Identities=18% Similarity=0.154 Sum_probs=163.9
Q ss_pred eeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcc
Q 005970 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIF 487 (667)
Q Consensus 408 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~ 487 (667)
|+||||||+++.+||||++||++|+++|||+||+|||+||||++||+||.+|+|+|| ++|.
T Consensus 1 p~viaHRG~~~~~PENTl~Af~~A~~~G~d~iE~DV~lTkDg~lVv~HD~~l~R~t~------------------~~g~- 61 (263)
T cd08580 1 PLIVAHRGGTADAPENTLLAISKALANGADAIWLTVQLSKDGVPVLYRPSDLKSLTN------------------GSGA- 61 (263)
T ss_pred CeEEEcCCCCCCCCccHHHHHHHHHHcCCCEEEEEeEECCCCCEEEeCCCchhcccC------------------CCCC-
Confidence 578999999999999999999999999999999999999999999999999999999 7776
Q ss_pred cccCCHHHHcccCCCccCCcccccccCCCCCCC-CccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHH
Q 005970 488 SFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKN-AGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVM 566 (667)
Q Consensus 488 i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~-~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~ 566 (667)
|.++||+||++|++|.++... ....|.+ +++||||+|+|+.++.. .++||||.+.. ..+++.|+
T Consensus 62 v~~~t~~el~~ld~g~~~~~~-----~~~~~~~~~~~iPtL~evl~~~~~~----~l~iEiK~~~~------~~~~~~v~ 126 (263)
T cd08580 62 VSAYTAAQLATLNAGYNFKPE-----GGYPYRGKPVGIPTLEQVLRAFPDT----PFILDMKSLPA------DPQAKAVA 126 (263)
T ss_pred hhhCcHHHHhcCCCccccccc-----cCcccCCCCCcCccHHHHHHhhcCC----eEEEEECCCCc------HHHHHHHH
Confidence 999999999999998764210 0112332 25899999999999753 69999997542 26789999
Q ss_pred HHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cC-------CcEEEEeccchh---hhhH-----------HHHHHHHH
Q 005970 567 EALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TS-------YELVYKVKENIR---DALN-----------QTIEDIKK 624 (667)
Q Consensus 567 ~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~-------~~~~~L~~~~~~---~~~~-----------~~l~~~~~ 624 (667)
++|+++++. ++++|+|||+++|++++++ |+ +++++|.+.... +... ..+..+..
T Consensus 127 ~~i~~~~~~----~~v~v~SF~~~~l~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (263)
T cd08580 127 RVLERENAW----SRVRIYSTNADYQDALAPYPQARLFESRDVTRTRLANVAMAHQCDLPPDSGAWAGFELRRKVTVVET 202 (263)
T ss_pred HHHHhcCCC----CCEEEEECCHHHHHHHHhcCcccccccHHHHHHHHHhhhcccccccCccchhhccccccccchheee
Confidence 999999987 7999999999999999999 95 444444321100 0000 00000001
Q ss_pred hhhhcCCCeeEEeCCCCCccHHHHHHHHHc-CCcEEEEeccCC
Q 005970 625 FADSVVLTMSLYLKRGTSSQTQLWRSTHIT-RELVLMELLQNS 666 (667)
Q Consensus 625 ~a~~i~~~~~i~~~~~~~~~~~~v~~ah~~-Gl~V~vWTVn~e 666 (667)
+ .++.. . .+.+....++++|+.+|++ |++|++||||++
T Consensus 203 ~--~~~~~-~-~~~~~~l~t~~~V~~~h~~~gl~V~~WTVN~~ 241 (263)
T cd08580 203 F--TLGEG-R-SPVQATLWTPAAVDCFRRNSKVKIVLFGINTA 241 (263)
T ss_pred e--ccccc-c-cccccccCCHHHHHHHHhcCCcEEEEEEeCCH
Confidence 1 01111 1 1111123467999999999 999999999984
No 33
>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.
Probab=100.00 E-value=3.9e-40 Score=333.72 Aligned_cols=220 Identities=18% Similarity=0.170 Sum_probs=167.5
Q ss_pred EEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCcc
Q 005970 93 FVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGW 172 (667)
Q Consensus 93 ~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~ 172 (667)
+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|+|++. +
T Consensus 1 ~iiaHRG~~~~~pENTl~af~~A~~~Gad--~iE~DV~lT~Dg~~Vv~HD~~l~R~t~~~-------------------g 59 (226)
T cd08568 1 IILGHRGYRAKYPENTLEAFKKAIEYGAD--GVELDVWLTKDGKLVVLHDENLKRVGGVD-------------------L 59 (226)
T ss_pred CEEeccCCCCCCCcchHHHHHHHHHcCcC--EEEEEEEEcCCCCEEEECCCcccccCCCC-------------------c
Confidence 48999999999999999999999999999 99999999999999999999999999843 2
Q ss_pred ccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCC-CceEEeccCchhhhhcCCcHHHHHHHHHhhcCC-
Q 005970 173 FSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV- 250 (667)
Q Consensus 173 ~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~-~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~~- 250 (667)
.|.++||+||++++++ +++||||+|+|+++++ ..++||+|.+. ..+.++++++++++
T Consensus 60 ~v~~~t~~eL~~l~~~-------------g~~iPtL~evl~~~~~~~~l~iEiK~~~--------~~~~~~~~l~~~~~~ 118 (226)
T cd08568 60 KVKELTYKELKKLHPG-------------GELIPTLEEVFRALPNDAIINVEIKDID--------AVEPVLEIVEKFNAL 118 (226)
T ss_pred eeecCCHHHHhhCCCC-------------CCcCCCHHHHHHhcCCCcEEEEEECCcc--------HHHHHHHHHHHcCCC
Confidence 7999999999999875 2489999999999865 67999999642 35678888888874
Q ss_pred --ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHh-hcceecCCCccccccCCCCCCC
Q 005970 251 --NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDYIWPVDESLYLL 327 (667)
Q Consensus 251 --~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~~~~~~~~~~l~ 327 (667)
.+++||+++.|+++++.. | ..++.+ +..... . .... ...... .+..+.+.+..+. . .+ ..
T Consensus 119 ~~v~i~SF~~~~l~~~~~~~-p-~~~~~~-l~~~~~--~--~~~~------~~~~~~~~~~~~~~~~~~~~-~--~~-~~ 181 (226)
T cd08568 119 DRVIFSSFNHDALRELRKLD-P-DAKVGL-LIGEEE--E--GFSI------PELHEKLKLYSLHVPIDAIG-Y--IG-FE 181 (226)
T ss_pred CcEEEEECCHHHHHHHHHhC-C-CCcEEE-Eeeccc--c--ccCH------HHHHHhcCCcEeccchhhhc-c--cc-cc
Confidence 499999999999999986 3 567765 322110 0 0000 011111 1233343322210 0 00 11
Q ss_pred CChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCC
Q 005970 328 PHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLT 387 (667)
Q Consensus 328 ~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~ 387 (667)
.++++++.+|++|++|++||||++ ++++++.+ + |||||||+|+.
T Consensus 182 ~~~~~v~~~~~~G~~v~~WTvn~~------------~~~~~l~~-~---vdgiiTD~p~~ 225 (226)
T cd08568 182 KFVELLRLLRKLGLKIVLWTVNDP------------ELVPKLKG-L---VDGVITDDVEK 225 (226)
T ss_pred ccHHHHHHHHHCCCEEEEEcCCCH------------HHHHHHHh-h---CCEEEccCccc
Confidence 146899999999999999999753 67777763 4 99999999985
No 34
>cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=4.5e-40 Score=334.88 Aligned_cols=225 Identities=19% Similarity=0.216 Sum_probs=176.8
Q ss_pred EEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCccc
Q 005970 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (667)
Q Consensus 94 iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~~ 173 (667)
||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|+|++. +.
T Consensus 1 iiaHRG~~~~~pENTl~af~~A~~~G~~--~vE~Dv~lTkDg~~Vv~HD~~l~r~t~~~-------------------~~ 59 (233)
T cd08582 1 VIAHRGASAEAPENTLAAFELAWEQGAD--GIETDVRLTKDGELVCVHDPTLKRTSGGD-------------------GA 59 (233)
T ss_pred CEeCCCCCCCCCchHHHHHHHHHHcCCC--EEEEEEEEccCCCEEEecCCccccccCCC-------------------cc
Confidence 6899999999999999999999999999 99999999999999999999999999843 27
Q ss_pred cccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCC--CceEEeccCchhhhhcCCcHHHHHHHHHhhcC-C
Q 005970 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP--PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVV-V 250 (667)
Q Consensus 174 v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~--~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~-~ 250 (667)
|.++||+||++++++.++ ...|.+ ++||||+|+|+++++ ..++||+|.+ .....+++.+++++++++ .
T Consensus 60 i~~~t~~el~~l~~~~~~---~~~~~~--~~iptL~evl~~~~~~~~~l~ieiK~~----~~~~~~~~~~~~~~~~~~~~ 130 (233)
T cd08582 60 VSDLTLAELRKLDIGSWK---GESYKG--EKVPTLEEYLAIVPKYGKKLFIEIKHP----RRGPEAEEELLKLLKESGLL 130 (233)
T ss_pred hhhCCHHHHhcCCCCccc---CCCCCC--CcCCCHHHHHHHHHhcCceEEEEeCCC----ccCccHHHHHHHHHHHcCCC
Confidence 999999999999998764 234444 699999999999865 6799999975 122457888999999984 2
Q ss_pred ---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHH-hhcceecCCCccccccCCCCCC
Q 005970 251 ---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIK-TFASGILVPKDYIWPVDESLYL 326 (667)
Q Consensus 251 ---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~-~~a~~i~~~~~~~~~~~~~~~l 326 (667)
++++||++..++++++.. | ++++.+....... .... ..... ..+.++.+.+..
T Consensus 131 ~~~v~~~Sf~~~~l~~~~~~~-p-~~~~~~l~~~~~~------~~~~-----~~~~~~~~~~~i~~~~~~---------- 187 (233)
T cd08582 131 PEQIVIISFDAEALKRVRELA-P-TLETLWLRNYKSP------KEDP-----RPLAKSGGAAGLDLSYEK---------- 187 (233)
T ss_pred CCCEEEEecCHHHHHHHHHHC-C-CCcEEEEeccCcc------ccch-----hHHHHhhCceEEcccccc----------
Confidence 399999999999999986 3 5777753311110 0000 00111 124455543321
Q ss_pred CCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCC
Q 005970 327 LPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPL 386 (667)
Q Consensus 327 ~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~ 386 (667)
...+++++.+|++|++|++||||+. ++|++++++| ||||+||+|+
T Consensus 188 ~~~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~l~~~G---Vdgi~TD~p~ 232 (233)
T cd08582 188 KLNPAFIKALRDAGLKLNVWTVDDA------------EDAKRLIELG---VDSITTNRPG 232 (233)
T ss_pred cCCHHHHHHHHHCCCEEEEEeCCCH------------HHHHHHHHCC---CCEEEcCCCC
Confidence 1247899999999999999999753 7899999887 9999999997
No 35
>PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional
Probab=100.00 E-value=3.5e-40 Score=338.70 Aligned_cols=212 Identities=16% Similarity=0.116 Sum_probs=162.6
Q ss_pred CceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCC
Q 005970 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSG 485 (667)
Q Consensus 406 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g 485 (667)
..|.+|||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+|+|+|| ++|
T Consensus 6 ~~~~iiaHRG~~~~~pENT~~Af~~A~~~G~d~vE~DV~lT~Dg~lVV~HD~~l~R~t~------------------~~~ 67 (249)
T PRK09454 6 PYPRIVAHRGGGKLAPENTLAAIDVGARYGHRMIEFDAKLSADGEIFLLHDDTLERTSN------------------GWG 67 (249)
T ss_pred CCCeEEECCCCCCCCChHHHHHHHHHHHcCCCEEEEEeeECCCCCEEEECCCcccccCC------------------CCC
Confidence 45899999999999999999999999999999999999999999999999999999999 667
Q ss_pred cccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHH
Q 005970 486 IFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSV 565 (667)
Q Consensus 486 ~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v 565 (667)
. |.++||+||++++++.++ .+.|.+ ++||||+|+|+.++.. . +.++||||...... ....+.+
T Consensus 68 ~-v~~~t~~el~~l~~~~~~---------~~~~~~-~~iPtL~evl~~~~~~-~-~~l~iEiK~~~~~~----~~~~~~v 130 (249)
T PRK09454 68 V-AGELTWQDLAQLDAGSWF---------SAAFAG-EPLPTLSQVAARCRAH-G-MAANIEIKPTTGRE----AETGRVV 130 (249)
T ss_pred c-hhhCCHHHHHhcCCCCcc---------CCCCCC-CcCCCHHHHHHHHHhc-C-CEEEEEECCCCCcc----hhHHHHH
Confidence 5 999999999999998643 234554 8999999999999764 2 47999999643211 1233344
Q ss_pred HHHHHhc--CCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCC
Q 005970 566 MEALGNA--GYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTS 642 (667)
Q Consensus 566 ~~~l~~~--~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~ 642 (667)
..+++.. ++. ++++|+|||+++|++++++ |++++++++..... .....+. .++. ..+.+. ...
T Consensus 131 ~~~~~~~~~~~~----~~v~v~SF~~~~l~~l~~~~p~~~~~~l~~~~~~----~~~~~~~----~~~~-~~~~~~-~~~ 196 (249)
T PRK09454 131 ALAARALWAGAA----VPPLLSSFSEDALEAARQAAPELPRGLLLDEWPD----DWLELTR----RLGC-VSLHLN-HKL 196 (249)
T ss_pred HHHHHHHhcCCC----CCEEEEeCCHHHHHHHHHhCCCCcEEEEeccccc----cHHHHHH----hcCC-eEEecc-ccc
Confidence 4444443 333 5899999999999999999 99999999864211 1111111 1222 122221 112
Q ss_pred ccHHHHHHHHHcCCcEEEEeccCC
Q 005970 643 SQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 643 ~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
.++++++.+|++|++|++||||++
T Consensus 197 ~~~~~v~~~~~~g~~v~~WTvn~~ 220 (249)
T PRK09454 197 LDEARVAALKAAGLRILVYTVNDP 220 (249)
T ss_pred CCHHHHHHHHHCCCEEEEEeCCCH
Confidence 357999999999999999999974
No 36
>cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=1.9e-40 Score=342.35 Aligned_cols=222 Identities=22% Similarity=0.205 Sum_probs=171.5
Q ss_pred eEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccC--CCc
Q 005970 409 LVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG--SGI 486 (667)
Q Consensus 409 ~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~--~g~ 486 (667)
+||||||+++.+||||++||++|+++|||+||+|||+||||++||+||.+|+|+|| + +|.
T Consensus 2 ~iiaHRG~~~~~pENT~~af~~A~~~G~d~vE~DV~lTkDg~~Vv~HD~~l~r~t~------------------~~~~g~ 63 (256)
T cd08601 2 AVIAHRGASGYAPEHTFAAYDLAREMGADYIELDLQMTKDGVLVAMHDETLDRTTN------------------IERPGP 63 (256)
T ss_pred ceEEcCCCCCCCCCchHHHHHHHHHcCCCEEEEEeeECCCCeEEEeCCCccccccC------------------CCCCce
Confidence 58999999999999999999999999999999999999999999999999999999 4 565
Q ss_pred ccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHH
Q 005970 487 FSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVM 566 (667)
Q Consensus 487 ~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~ 566 (667)
|.++||+||++++.+.++... +...++..+. +++||||+|+|+.+++. ++++||||.+... ..+++.++
T Consensus 64 -v~~~t~~el~~l~~~~~~~~~-~~~~~~~~~~-~~~iptL~evl~~~~~~---~~l~IEiK~~~~~-----~~~~~~v~ 132 (256)
T cd08601 64 -VKDYTLAEIKQLDAGSWFNKA-YPEYARESYS-GLKVPTLEEVIERYGGR---ANYYIETKSPDLY-----PGMEEKLL 132 (256)
T ss_pred -eecCcHHHHHhcCCCcccccc-CccccccccC-CccCCCHHHHHHHhccC---ceEEEEeeCCCCC-----CCHHHHHH
Confidence 999999999999987643100 0000112234 48999999999999875 4899999975431 25788999
Q ss_pred HHHHhcCCCCCC--CceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchh-hhhHHHHHHHHHhhhhcCCCeeEEeCCCCC
Q 005970 567 EALGNAGYNKQT--ALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIR-DALNQTIEDIKKFADSVVLTMSLYLKRGTS 642 (667)
Q Consensus 567 ~~l~~~~~~~~~--~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~-~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~ 642 (667)
++++++++.... .++++|+||++++|++++++ |+++++++++.... ......+..+..++.++++. ...
T Consensus 133 ~~l~~~~~~~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 205 (256)
T cd08601 133 ATLDKYGLLTDNLKNGQVIIQSFSKESLKKLHQLNPNIPLVQLLWYGEGAETYDKWLDEIKEYAIGIGPS-------IAD 205 (256)
T ss_pred HHHHHcCCCcccCCCCCEEEecCCHHHHHHHHHhCCCCcEEEEeccCcccccchhHHHHHHhcCeEeCCc-------hhh
Confidence 999999875210 15899999999999999999 99999999864211 11112233333333344432 112
Q ss_pred ccHHHHHHHHHcCCcEEEEeccCC
Q 005970 643 SQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 643 ~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
.++++|+.+|++|++|++||||+.
T Consensus 206 ~~~~~v~~~~~~g~~v~~wTvn~~ 229 (256)
T cd08601 206 ADPWMVHLIHKKGLLVHPYTVNEK 229 (256)
T ss_pred cCHHHHHHHHHCCCEEEEEecCCH
Confidence 346899999999999999999973
No 37
>cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=2.5e-40 Score=335.30 Aligned_cols=209 Identities=14% Similarity=0.159 Sum_probs=160.3
Q ss_pred EEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcccc
Q 005970 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIFSF 489 (667)
Q Consensus 410 iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~i~ 489 (667)
||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|| ++|. |.
T Consensus 1 iiaHRG~~~~~PENTl~Af~~A~~~gad~iE~DV~lTkDg~~Vv~HD~~l~r~t~------------------~~~~-v~ 61 (229)
T cd08581 1 LVAHRGYPARYPENTLVGFRAAVDAGARFVEFDVQLSADGVPVVFHDDTLLRLTG------------------VEGL-LH 61 (229)
T ss_pred CEeCCCCCCCCCccHHHHHHHHHHcCCCEEEEeeeECCCCcEEEECCCccccccC------------------CCce-ec
Confidence 6899999999999999999999999999999999999999999999999999999 6675 99
Q ss_pred cCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHHHH
Q 005970 490 SLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEAL 569 (667)
Q Consensus 490 d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l 569 (667)
++||+||++|+++.... ..+.|.+ ++||||+|+|+.+++.+. ++++||||.+.... ..+.+.+.+++
T Consensus 62 ~~t~~el~~l~~~~~~~-------~~~~~~~-~~iptL~evl~~~~~~~~-~~l~iEiK~~~~~~----~~~~~~v~~~~ 128 (229)
T cd08581 62 ELEDAELDSLRVAEPAR-------FGSRFAG-EPLPSLAAVVQWLAQHPQ-VTLFVEIKTESLDR----FGLERVVDKVL 128 (229)
T ss_pred cCCHHHHhhcccccCcc-------cccccCC-ccCCCHHHHHHHHhhCCC-ceEEEEecCCcccc----cchhHHHHHHH
Confidence 99999999997643211 1244554 899999999999987312 47999999765321 23445555566
Q ss_pred HhcC-CCCCCCceEEEEeCCHHHHHHHHhccCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCCccHHHH
Q 005970 570 GNAG-YNKQTALKVMIQSTDSSVLMKLREKTSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTSSQTQLW 648 (667)
Q Consensus 570 ~~~~-~~~~~~~~v~i~SFd~~~L~~~~~~p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~~~~~~v 648 (667)
+.++ +. ++++|+|||+++|+++|++|.++++++..... ... ...+..+++. .+.+...+. ..+
T Consensus 129 ~~~~~~~----~~~~i~SF~~~~l~~~r~~~~~~~~~l~~~~~----~~~----~~~~~~~~~~-~~~~~~~~~---~~v 192 (229)
T cd08581 129 RALPAVA----AQRVLISFDYDLLALAKQQGGPRTGWVLPDWD----DAS----LAEADELQPD-YLFCDKNLL---PDT 192 (229)
T ss_pred HHHHhcc----CCeEEEeCCHHHHHHHHhcCCCCeEEEeccCC----hHH----HHHHHhhCCC-EEecccccC---hhh
Confidence 6554 44 68999999999999999998899999875311 011 1223334554 222221221 468
Q ss_pred HHHHHcCCcEEEEeccCC
Q 005970 649 RSTHITRELVLMELLQNS 666 (667)
Q Consensus 649 ~~ah~~Gl~V~vWTVn~e 666 (667)
+.+|++|++|++||||++
T Consensus 193 ~~~~~~G~~v~vWTVn~~ 210 (229)
T cd08581 193 GDLWAGTWKWVIYEVNEP 210 (229)
T ss_pred HHHHhCCceEEEEEcCCH
Confidence 889999999999999984
No 38
>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=3.8e-40 Score=341.60 Aligned_cols=249 Identities=18% Similarity=0.186 Sum_probs=182.0
Q ss_pred CCCEEEEeCCCCCC--CCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCC
Q 005970 90 DPPFVVARGGFSGI--FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGV 167 (667)
Q Consensus 90 ~~~~iiaHRG~~~~--~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~ 167 (667)
.+|+||||||+++. +||||++||+.|++.|+| +||+|||+||||++||+||.++++++...- .++. +|
T Consensus 2 ~~~~iiaHRG~~~~~~~pENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~~~~~~~~~~-----~~~~--~~- 71 (265)
T cd08564 2 VRPIIVGHRGAGCSTLYPENTLPSFRRALEIGVD--GVELDVFLTKDNEIVVFHGTEDDTNPDTSI-----QLDD--SG- 71 (265)
T ss_pred CCceEEEeCCCCCCCCCCchhHHHHHHHHHcCCC--EEEEeeEECCCCCEEEEcCCccccCccccc-----cccC--CC-
Confidence 36899999999988 999999999999999999 999999999999999999998776332000 0000 01
Q ss_pred CCCccccccCCHHhhccccccccccCCCC---CCCCCCCccCCHHHHHHhhCC-CceEEeccCchhhhhcCCcHHHHHHH
Q 005970 168 PTPGWFSIDYTLNDLSNIILNQGVYSRTD---KFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSFVLS 243 (667)
Q Consensus 168 ~~~g~~v~d~t~~el~~l~~~~~~~~~~~---~~~~~~~~iptL~e~l~~~~~-~~~~ieiK~~~~~~~~~~~~~~~l~~ 243 (667)
.+.|.++||+||++++++.++...+. .+. +++||||+|+|+++++ .+++||||.+. ..+++.+++
T Consensus 72 ---~~~v~~~t~~el~~l~~~~~~~~~~~~~~~~~--~~~iptL~evl~~~~~~~~l~iEiK~~~------~~~~~~v~~ 140 (265)
T cd08564 72 ---FKNINDLSLDEITRLHFKQLFDEKPCGADEIK--GEKIPTLEDVLVTFKDKLKYNIELKGRE------VGLGERVLN 140 (265)
T ss_pred ---ccchhhCcHHHHhhcccCcccccCcccccccC--CccCCCHHHHHHHhccCcEEEEEeCCCc------hhHHHHHHH
Confidence 14799999999999999988743211 122 4699999999999965 68999999653 246788999
Q ss_pred HHhhcCC---ceEecCCH-HHHHHHHhhhCCCC---CceEEEeccCCccCCCCCcchhHHhhcHHHHHh-hcceecCCCc
Q 005970 244 VSRSVVV---NYISSPEV-NFLRSIAARFRPSM---TKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKD 315 (667)
Q Consensus 244 ~l~~~~~---~~i~SFd~-~~L~~l~~~~~~~~---~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~ 315 (667)
++++++. ++|+||++ ++++++++.. + + +++.+ +..... ...+.+. +..... .+.++.+.+.
T Consensus 141 ~l~~~~~~~~v~i~SF~~~~~l~~~~~~~-~-~~~~~~~~~-l~~~~~-----~~~~~~~---~~~~~~~~~~~v~~~~~ 209 (265)
T cd08564 141 LVEKYGMILQVHFSSFLHYDRLDLLKALR-P-NKLNVPIAL-LFNEVK-----SPSPLDF---LEQAKYYNATWVNFSYD 209 (265)
T ss_pred HHHHcCCCCCEEEEecCchhHHHHHHHhC-c-CCCCceEEE-EecCCC-----CcccccH---HHHHHhcCCceeeechh
Confidence 9999886 49999999 9999999885 3 3 66665 322111 0011111 111121 1344444322
Q ss_pred cccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhh
Q 005970 316 YIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAV 392 (667)
Q Consensus 316 ~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l 392 (667)
.+ .+.+|+.+|++|++|++||.+.- .|+.++|++++++| |||||||+|+.+.+++
T Consensus 210 ~~-----------~~~~v~~~~~~Gl~v~~wT~~~~--------~n~~~~~~~l~~~G---vdgiiTD~p~~~~~~~ 264 (265)
T cd08564 210 FW-----------TEEFVKKAHENGLKVMTYFDEPV--------NDNEEDYKVYLELG---VDCICPNDPVLLVNFL 264 (265)
T ss_pred hh-----------hHHHHHHHHHcCCEEEEecCCCC--------CCCHHHHHHHHHcC---CCEEEcCCHHHHHHhh
Confidence 21 36799999999999999993210 13458999999888 9999999999888765
No 39
>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.
Probab=100.00 E-value=7.9e-40 Score=332.46 Aligned_cols=224 Identities=21% Similarity=0.290 Sum_probs=177.0
Q ss_pred CEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCc
Q 005970 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (667)
Q Consensus 92 ~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g 171 (667)
++||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|+|++.
T Consensus 1 ~~iiaHRG~~~~~pENT~~Af~~A~~~g~~--~vE~DV~~TkDg~~Vv~HD~~l~r~t~~~------------------- 59 (230)
T cd08563 1 TLIFAHRGYSGTAPENTLLAFKKAIEAGAD--GIELDVHLTKDGQLVVIHDETVDRTTNGK------------------- 59 (230)
T ss_pred CeEEEccCCCCCCCchhHHHHHHHHHcCCC--EEEEEeeEcCCCCEEEECCCCcccccCCC-------------------
Confidence 469999999999999999999999999999 99999999999999999999999999843
Q ss_pred cccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhC--CCceEEeccCchhhhhcCCcHHHHHHHHHhhcC
Q 005970 172 WFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVV 249 (667)
Q Consensus 172 ~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~--~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~ 249 (667)
+.|.++||+||++++.+.++. ..+. ..+||||+|+|++++ +..++||+|.+... ...+++.+++++++++
T Consensus 60 ~~i~~~t~~el~~l~~~~~~~---~~~~--~~~iptL~evl~~~~~~~~~l~leiK~~~~~---~~~~~~~l~~~l~~~~ 131 (230)
T cd08563 60 GYVKDLTLEELKKLDAGSWFD---EKFT--GEKIPTLEEVLDLLKDKDLLLNIEIKTDVIH---YPGIEKKVLELVKEYN 131 (230)
T ss_pred CchhhCCHHHHHhcCCCCccC---ccCC--CCcCCCHHHHHHHHHhcCcEEEEEECCCCCc---ChhHHHHHHHHHHHcC
Confidence 269999999999999987642 2333 359999999999986 46799999965422 1357788999999987
Q ss_pred C---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhh-cceecCCCccccccCCCCC
Q 005970 250 V---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF-ASGILVPKDYIWPVDESLY 325 (667)
Q Consensus 250 ~---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~~~~~~~~~~ 325 (667)
+ .+++||++..++++++.. | +.++.+ +.... ... ....+... +.++.+.+..
T Consensus 132 ~~~~v~~~Sf~~~~l~~~~~~~-p-~~~~~~-l~~~~-~~~-----------~~~~~~~~~~~~v~~~~~~--------- 187 (230)
T cd08563 132 LEDRVIFSSFNHESLKRLKKLD-P-KIKLAL-LYETG-LQD-----------PKDYAKKIGADSLHPDFKL--------- 187 (230)
T ss_pred CCCCEEEEcCCHHHHHHHHHHC-C-CCcEEE-EecCc-ccC-----------HHHHHHHhCCEEEccCchh---------
Confidence 5 399999999999999986 3 567765 32211 000 01111111 3344443321
Q ss_pred CCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCC
Q 005970 326 LLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (667)
Q Consensus 326 l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P 385 (667)
.++.+++.+|++|++|++||||+ .+++.+++++| ||||+||+|
T Consensus 188 --~~~~~i~~~~~~g~~v~~Wtvn~------------~~~~~~~~~~G---Vdgi~TD~P 230 (230)
T cd08563 188 --LTEEVVEELKKRGIPVRLWTVNE------------EEDMKRLKDLG---VDGIITNYP 230 (230)
T ss_pred --cCHHHHHHHHHCCCEEEEEecCC------------HHHHHHHHHCC---CCEEeCCCC
Confidence 24779999999999999999975 37899999888 999999998
No 40
>cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family.
Probab=100.00 E-value=4.5e-40 Score=346.57 Aligned_cols=227 Identities=16% Similarity=0.181 Sum_probs=169.1
Q ss_pred ccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCcccccccccc
Q 005970 403 SKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMA 482 (667)
Q Consensus 403 ~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~ 482 (667)
.....+.||||||+++.+||||++||++|+++|||+||+|||+||||++||+||.+++|+||
T Consensus 22 ~~~~~~~iiAHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVV~HD~~l~Rtt~------------------ 83 (300)
T cd08612 22 KSPFPCRHISHRGGSGENLENTMEAFEHAVKVGTDMLELDVHLTKDGQVVVSHDENLLRSCG------------------ 83 (300)
T ss_pred ccCCCCCEEECCCCCCCCCccHHHHHHHHHHcCCCEEEEEeeECcCCeEEEECCccccccCC------------------
Confidence 34567899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHH
Q 005970 483 GSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVT 562 (667)
Q Consensus 483 ~~g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~ 562 (667)
++|. |.++|++||++|+++...-+. .+..+.+.+.+ ++||||+|+|+.++. +.++||||.+.. .++
T Consensus 84 ~~g~-V~~~t~~eL~~l~~~~~~~~~-~~~~~~~~~~g-~~IPtL~EvL~~~~~----~~lnIEiK~~~~-------~~~ 149 (300)
T cd08612 84 VDKL-VSDLNYADLPPYLEKLEVTFS-PGDYCVPKGSD-RRIPLLEEVFEAFPD----TPINIDIKVEND-------ELI 149 (300)
T ss_pred CCcc-cccCCHHHHhhcccccccccc-CCccccccCCC-CCCCCHHHHHHhCCC----CeEEEEECCCch-------HHH
Confidence 7776 999999999999654210000 00012344554 899999999999854 379999997532 478
Q ss_pred HHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhh-------h------HH------HHHHH
Q 005970 563 NSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDA-------L------NQ------TIEDI 622 (667)
Q Consensus 563 ~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~-------~------~~------~l~~~ 622 (667)
++++++++++++. ++++|+|||+++|.+++++ |+++++++++...... . .. .....
T Consensus 150 ~~v~~~i~~~~~~----~~v~isSF~~~~L~~~~~~~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (300)
T cd08612 150 KKVSDLVRKYKRE----DITVWGSFNDEIVKKCHKENPNIPLFFSLKRVLLLLLLYYTGLLPFIPIKESFLEIPMPSIFL 225 (300)
T ss_pred HHHHHHHHHcCCC----CcEEEEeCCHHHHHHHHHhCCCccEEechHHHHHHHHHHHcccCccccCccccccccchhhhh
Confidence 8999999999987 7999999999999999999 9999999764310000 0 00 00000
Q ss_pred HHhhh----hcCCCeeEEeCCCCCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 623 KKFAD----SVVLTMSLYLKRGTSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 623 ~~~a~----~i~~~~~i~~~~~~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
..+.. .... ...++.+....++++|+.+|++|++|++||||++
T Consensus 226 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~G~~v~vWTVNd~ 272 (300)
T cd08612 226 KTYFPKSMSRLNR-FVLFLIDWLLMRPSLFRHLQKRGIQVYGWVLNDE 272 (300)
T ss_pred hhccccccccccc-ceecccccccCCHHHHHHHHHCCCEEEEeecCCH
Confidence 00000 0000 0111112223467999999999999999999974
No 41
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=100.00 E-value=5.8e-40 Score=331.17 Aligned_cols=215 Identities=17% Similarity=0.243 Sum_probs=171.6
Q ss_pred EEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCccc
Q 005970 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (667)
Q Consensus 94 iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~~ 173 (667)
||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|+|+.. +.
T Consensus 1 iiaHRG~~~~~pENT~~af~~A~~~Gad--~vE~DV~~T~Dg~~vv~HD~~l~r~t~~~-------------------~~ 59 (220)
T cd08579 1 IIAHRGVSSNGVENTLEALEAAIKAKPD--YVEIDVQETKDGQFVVMHDANLKRLAGVN-------------------KK 59 (220)
T ss_pred CeeccCCCCCCCccHHHHHHHHHHcCCC--EEEEEeeEcCCCCEEEEcCCchhhccCCC-------------------CC
Confidence 6899999999999999999999999999 99999999999999999999999999843 27
Q ss_pred cccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCC--CceEEeccCchhhhhcCCcHHHHHHHHHhhcCC-
Q 005970 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP--PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV- 250 (667)
Q Consensus 174 v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~--~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~~- 250 (667)
|.++||+||++++++.++ . +.+||||+|+|+++++ ..++||+|.+.. ....+.+.++++++++++
T Consensus 60 v~~~t~~el~~l~~~~~~-------~--~~~iptL~evl~~~~~~~~~l~iEiK~~~~---~~~~~~~~v~~~l~~~~~~ 127 (220)
T cd08579 60 VWDLTLEELKKLTIGENG-------H--GAKIPSLDEYLALAKGLKQKLLIELKPHGH---DSPDLVEKFVKLYKQNLIE 127 (220)
T ss_pred hhhCCHHHHhcCcCccCC-------C--CCcCCCHHHHHHHhhccCCeEEEEECCCCC---CCHHHHHHHHHHHHHcCCC
Confidence 999999999999987652 2 3599999999999964 679999996542 223577888999998875
Q ss_pred --ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecCCCccccccCCCCCCCC
Q 005970 251 --NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLP 328 (667)
Q Consensus 251 --~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~~~~~~~~~~l~~ 328 (667)
++++||++..++.+++.. | ..++.+.. ... .. . +. ...++.+++.+.. .
T Consensus 128 ~~v~v~Sf~~~~l~~~~~~~-p-~~~~~~~~-~~~-~~--------~----~~--~~~~~~~~~~~~~-----------~ 178 (220)
T cd08579 128 NQHQVHSLDYRVIEKVKKLD-P-KIKTGYIL-PFN-IG--------N----LP--KTNVDFYSIEYST-----------L 178 (220)
T ss_pred cCeEEEeCCHHHHHHHHHHC-C-CCeEEEEE-ecc-cC--------c----cc--ccCceEEeeehhh-----------c
Confidence 389999999999999875 3 56666522 111 00 0 00 1123334332211 2
Q ss_pred ChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCC
Q 005970 329 HTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (667)
Q Consensus 329 ~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P 385 (667)
++.+++.+|++|++|++||+|++ ++++.++++| ||||+||+|
T Consensus 179 ~~~~v~~~~~~G~~v~~wtvn~~------------~~~~~~~~~G---vd~i~TD~P 220 (220)
T cd08579 179 NKEFIRQAHQNGKKVYVWTVNDP------------DDMQRYLAMG---VDGIITDYP 220 (220)
T ss_pred CHHHHHHHHHCCCEEEEEcCCCH------------HHHHHHHHcC---CCEEeCCCC
Confidence 46799999999999999999753 7899999888 999999998
No 42
>cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG)
Probab=100.00 E-value=1.3e-39 Score=330.65 Aligned_cols=209 Identities=21% Similarity=0.208 Sum_probs=167.5
Q ss_pred EEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcccc
Q 005970 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIFSF 489 (667)
Q Consensus 410 iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~i~ 489 (667)
||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|| ++|. |+
T Consensus 1 iiaHRG~~~~~pENT~~af~~A~~~gad~iE~Dv~~TkDg~lvv~HD~~l~r~t~------------------~~~~-i~ 61 (229)
T cd08562 1 IIAHRGASSLAPENTLAAFRAAAELGVRWVEFDVKLSGDGTLVLIHDDTLDRTTN------------------GSGA-VT 61 (229)
T ss_pred CEeCCCCCCCCCchHHHHHHHHHHcCCCEEEEEEeECCCCCEEEEcCCCCccccC------------------CCce-ee
Confidence 6899999999999999999999999999999999999999999999999999999 6665 99
Q ss_pred cCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHHHH
Q 005970 490 SLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEAL 569 (667)
Q Consensus 490 d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l 569 (667)
++||+||++|+.+.++ .+.|. +++||||+|+|+++++.+ +.++||||.+... ...+++.|++++
T Consensus 62 ~lt~~el~~l~~~~~~---------~~~~~-~~~iptl~evl~~~~~~~--~~l~iEiK~~~~~----~~~~~~~v~~~l 125 (229)
T cd08562 62 ELTWAELAQLDAGSWF---------SPEFA-GEPIPTLADVLELARELG--LGLNLEIKPDPGD----EALTARVVAAAL 125 (229)
T ss_pred cCcHHHHhhcCCCccc---------CCCCC-CCCCCCHHHHHHHHHhcC--CEEEEEECCCCCc----cHHHHHHHHHHH
Confidence 9999999999987542 23444 389999999999998652 4799999975431 135788899999
Q ss_pred HhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCCccHHHH
Q 005970 570 GNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTSSQTQLW 648 (667)
Q Consensus 570 ~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~~~~~~v 648 (667)
++++... ++++|+||++++|..+++. |+++++++......+ .. ..+..+++. .+.+... ..+.++|
T Consensus 126 ~~~~~~~---~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~----~~----~~~~~~~~~-~~~~~~~-~~~~~~v 192 (229)
T cd08562 126 RELWPHA---SKLLLSSFSLEALRAARRAAPELPLGLLFDTLPAD----WL----ELLAALGAV-SIHLNYR-GLTEEQV 192 (229)
T ss_pred HHhcCCc---CCEEEECCCHHHHHHHHHhCCCCcEEEEecCCCcC----HH----HHHHHcCCe-EEecChh-hCCHHHH
Confidence 9998741 6999999999999999999 999999987542111 11 111222322 2222111 2356899
Q ss_pred HHHHHcCCcEEEEeccCC
Q 005970 649 RSTHITRELVLMELLQNS 666 (667)
Q Consensus 649 ~~ah~~Gl~V~vWTVn~e 666 (667)
+.+|++|++|++||||++
T Consensus 193 ~~~~~~g~~v~~wTvn~~ 210 (229)
T cd08562 193 KALKDAGYKLLVYTVNDP 210 (229)
T ss_pred HHHHHCCCEEEEEeCCCH
Confidence 999999999999999974
No 43
>cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=2.7e-39 Score=335.01 Aligned_cols=242 Identities=20% Similarity=0.184 Sum_probs=176.8
Q ss_pred EEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCC--CCC
Q 005970 93 FVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGV--PTP 170 (667)
Q Consensus 93 ~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~--~~~ 170 (667)
.||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|+... +|+ ...
T Consensus 2 ~iiaHRG~~~~~pENT~~Af~~A~~~Gad--~vE~DV~~TkDg~~Vv~HD~~l~r~~~r~~-----------~~~~~~~~ 68 (263)
T cd08567 2 DLQGHRGARGLLPENTLPAFAKALDLGVD--TLELDLVLTKDGVIVVSHDPKLNPDITRDP-----------DGAWLPYE 68 (263)
T ss_pred ceEeccCCCCCCCcchHHHHHHHHHcCCC--EEEEEEEEcCCCCEEEeCCCccCcceeecC-----------CCCccccc
Confidence 58999999999999999999999999999 999999999999999999999998764111 011 112
Q ss_pred ccccccCCHHhhccccccccccC--CCCCCCCC----CCccCCHHHHHHhhCC-----CceEEeccCchhhh---hcCCc
Q 005970 171 GWFSIDYTLNDLSNIILNQGVYS--RTDKFDGN----GFQILTVQDMARQIKP-----PGLWLNIQHDAFYA---QHNLS 236 (667)
Q Consensus 171 g~~v~d~t~~el~~l~~~~~~~~--~~~~~~~~----~~~iptL~e~l~~~~~-----~~~~ieiK~~~~~~---~~~~~ 236 (667)
++.|+++||+||++|+++.++.. ....|.+. +.+||||+|+|+++++ ..++||+|.+.... .....
T Consensus 69 ~~~v~~~t~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~~iptL~evl~~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~ 148 (263)
T cd08567 69 GPALYELTLAEIKQLDVGEKRPGSDYAKLFPEQIPVPGTRIPTLEEVFALVEKYGNQKVRFNIETKSDPDRDILHPPPEE 148 (263)
T ss_pred CcchhcCCHHHHHhcCCCccccCcCcccCCCccccCccccCCCHHHHHHHHHHhccCCceEEEEEcCCCCccccCccHHH
Confidence 35899999999999999876411 12222210 2689999999999964 67999999653221 11235
Q ss_pred HHHHHHHHHhhcCC---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHh-hcceecC
Q 005970 237 MRSFVLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILV 312 (667)
Q Consensus 237 ~~~~l~~~l~~~~~---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~ 312 (667)
+++.++++++++++ ++++||+++.++.+++.. | +.++.+.. .... ...+. ..+.. -+..+.+
T Consensus 149 ~~~~v~~~l~~~~~~~~v~~~Sf~~~~l~~~~~~~-p-~~~~~~l~-~~~~-----~~~~~------~~~~~~~~~~~~~ 214 (263)
T cd08567 149 FVDAVLAVIRKAGLEDRVVLQSFDWRTLQEVRRLA-P-DIPTVALT-EETT-----LGNLP------RAAKKLGADIWSP 214 (263)
T ss_pred HHHHHHHHHHHcCCCCceEEEeCCHHHHHHHHHHC-C-CccEEEEe-cCCc-----ccCHH------HHHHHhCCcEEec
Confidence 77889999998876 399999999999999885 3 56776533 1110 00111 11111 1222333
Q ss_pred CCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCC
Q 005970 313 PKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLT 387 (667)
Q Consensus 313 ~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~ 387 (667)
.+ ...++.+++.+|++|+.|++||||+ ..+|..++++| ||||+||+|++
T Consensus 215 ~~-----------~~~~~~~i~~~~~~G~~v~vwtvn~------------~~~~~~~~~~G---vdgi~TD~P~~ 263 (263)
T cd08567 215 YF-----------TLVTKELVDEAHALGLKVVPWTVND------------PEDMARLIDLG---VDGIITDYPDL 263 (263)
T ss_pred ch-----------hhcCHHHHHHHHHCCCEEEEecCCC------------HHHHHHHHHcC---CCEEEcCCCCC
Confidence 21 1225789999999999999999974 36889999888 99999999974
No 44
>cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G
Probab=100.00 E-value=3.2e-39 Score=332.76 Aligned_cols=231 Identities=15% Similarity=0.130 Sum_probs=172.9
Q ss_pred EEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCccc
Q 005970 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (667)
Q Consensus 94 iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~~ 173 (667)
||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|+|++. +.
T Consensus 1 iiaHRG~~~~~pENTl~af~~A~~~Gad--~iE~DV~lTkDg~~Vv~HD~~l~R~t~~~-------------------g~ 59 (258)
T cd08573 1 IIGHRGAGHDAPENTLAAFRQAKKNGAD--GVEFDLEFTKDGVPVLMHDDTVDRTTDGT-------------------GL 59 (258)
T ss_pred CEecCCCCCCCCccHHHHHHHHHHcCCC--EEEEEeeECCCCcEEEECCCCcceecCCC-------------------ce
Confidence 6899999999999999999999999999 99999999999999999999999999943 26
Q ss_pred cccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhC--CCceEEeccCchhhhhcCCcHHHHHHHHHhhcC-C
Q 005970 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVV-V 250 (667)
Q Consensus 174 v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~--~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~-~ 250 (667)
|+++||+||++++++.++.. ...|.+ ++||||+|+|++++ +..++||+|.+.. .+++.+.+++++++ .
T Consensus 60 v~~~t~~el~~l~~~~~~~~-~~~~~~--~~iptL~evl~~~~~~~~~l~iEiK~~~~------~~~~~v~~~l~~~~~~ 130 (258)
T cd08573 60 VAELTWEELRKLNAAAKHRL-SSRFPG--EKIPTLEEAVKECLENNLRMIFDVKSNSS------KLVDALKNLFKKYPGL 130 (258)
T ss_pred EecCcHHHHhhCCCCCCCCC-ccccCC--CCCCCHHHHHHHHHhcCCEEEEEeCCCcH------HHHHHHHHHHHHCCCc
Confidence 99999999999999877532 234555 69999999999985 4679999996531 46778889999888 4
Q ss_pred ---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCC----CCcc---hhHHhh-cHHHHH-----------hhcc
Q 005970 251 ---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPT----TNQT---YGSLLK-NLTFIK-----------TFAS 308 (667)
Q Consensus 251 ---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~----~~~~---y~~~~~-~l~~i~-----------~~a~ 308 (667)
.+++||++..|+++++.. | +.++.+ ++........ .+.. +..... -+..+. .-++
T Consensus 131 ~~~v~v~SF~~~~l~~~~~~~-p-~~~~g~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (258)
T cd08573 131 YDKAIVCSFNPIVIYKVRKAD-P-KILTGL-TWRPWFLSYTDDEGGPRRKSGWKHFLYSMLDVILEWSLHSWLPYFLGVS 207 (258)
T ss_pred cCCEEEEECCHHHHHHHHHhC-C-CceEEE-ecCcchhcccccccCcccchHHHHHHHHHHHHHHHHHHHhhhhhhcCee
Confidence 499999999999999986 3 566664 3321110000 0010 110000 000000 0122
Q ss_pred eecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHh-CCCcccceEecCC
Q 005970 309 GILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFID-NGDFSVDGVLSDF 384 (667)
Q Consensus 309 ~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~-~G~~gVDGIiTD~ 384 (667)
.+++.+.. .++.+|+.+|++|++|++||||+ ..+|+++++ +| || ||||+
T Consensus 208 ~v~~~~~~-----------~~~~~v~~~~~~G~~v~vWTVn~------------~~~~~~l~~~~G---Vd-iiTD~ 257 (258)
T cd08573 208 ALLIHKDD-----------ISSAYVRYWRARGIRVIAWTVNT------------PTEKQYFAKTLN---VP-YITDS 257 (258)
T ss_pred EEEechHh-----------cCHHHHHHHHHCCCEEEEEecCC------------HHHHHHHHHHhC---CC-eecCC
Confidence 23332221 25779999999999999999975 378999998 88 99 99997
No 45
>cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=3.5e-39 Score=338.19 Aligned_cols=253 Identities=16% Similarity=0.134 Sum_probs=180.7
Q ss_pred EEEEeCCCC--------CCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCccccccccccccccccccc
Q 005970 93 FVVARGGFS--------GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLV 164 (667)
Q Consensus 93 ~iiaHRG~~--------~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~ 164 (667)
+||||||++ +.+||||++||+.|+++|+| +||+|||+||||++||+||.+++|+|++...+
T Consensus 1 ~viaHRG~~~~~~~~~~~~~pENTl~Af~~A~~~Gad--~vE~DV~lTkDG~lVv~HD~~l~r~~~~~~~~--------- 69 (293)
T cd08572 1 LVIGHRGLGKNYASGSLAGIRENTIASFLAAAKHGAD--MVEFDVQLTKDGVPVIYHDFTISVSEKSKTGS--------- 69 (293)
T ss_pred CceEecCCCCCcCcccccCcCcccHHHHHHHHHcCCC--EEEEEEEEccCCeEEEEcCCcceeeccccccc---------
Confidence 589999997 68999999999999999999 99999999999999999999999999864321
Q ss_pred CCCCCCccccccCCHHhhccccccccccCCCCCC-------------CCCCCccCCHHHHHHhhCC-CceEEeccCchhh
Q 005970 165 NGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKF-------------DGNGFQILTVQDMARQIKP-PGLWLNIQHDAFY 230 (667)
Q Consensus 165 ~g~~~~g~~v~d~t~~el~~l~~~~~~~~~~~~~-------------~~~~~~iptL~e~l~~~~~-~~~~ieiK~~~~~ 230 (667)
++....+++|.+|||+||++++++.++..+.+.+ ...+.+||||+|+|+++++ .+++||||.+...
T Consensus 70 ~~~~g~~~~v~~lT~~eL~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iptL~evL~~~~~~~~l~IEiK~~~~~ 149 (293)
T cd08572 70 DEGELIEVPIHDLTLEQLKELGLQHISALKRKALTRKAKGPKPNPWGMDEHDPFPTLQEVLEQVPKDLGFNIEIKYPQLL 149 (293)
T ss_pred ccCcceeeehhhCcHHHHHhccccccccccccccccccccCCccccchhhccCCCCHHHHHHhCCCccceEEEEecCCcc
Confidence 1222223589999999999999987642211110 0113689999999999864 7899999965432
Q ss_pred hhc---------CCcHHHHHHHHHhhcCC---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHh-
Q 005970 231 AQH---------NLSMRSFVLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLL- 297 (667)
Q Consensus 231 ~~~---------~~~~~~~l~~~l~~~~~---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~- 297 (667)
... ...+++.+++++++++. ++++||++.+|+.+++.. | +.++++.+ .... .. ..+.+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~vl~~i~~~~~~~~vv~~SF~~~~l~~l~~~~-p-~~~~~~l~-~~~~-~~---~~~~~~~~ 222 (293)
T cd08572 150 EDGEGELTPYFERNAFVDTILAVVFEHAGGRRIIFSSFDPDICIMLRLKQ-N-KYPVLFLT-NGGT-NE---VEHMDPRR 222 (293)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHhCCCCcEEEECCCHHHHHHHHhhC-c-cCCEEEEe-cCCC-Cc---ccccchhh
Confidence 210 12467888999999876 399999999999999985 3 67887633 2111 00 0000000
Q ss_pred hcHHHHHhh-----cceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhC
Q 005970 298 KNLTFIKTF-----ASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDN 372 (667)
Q Consensus 298 ~~l~~i~~~-----a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~ 372 (667)
..+..+..+ +.++.+.... +..++.+|+.+|++|+.|++|||+| |..++|+.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~v~~~~~~Gl~v~~wTv~~----------n~~~~~~~l~~~ 283 (293)
T cd08572 223 RSLQAAVNFALAEGLLGVVLHAED---------LLKNPSLISLVKALGLVLFTYGDDN----------NDPENVKKQKEL 283 (293)
T ss_pred hhHHHHHHHHHHCCCeEEEechHH---------hhcCcHHHHHHHHcCcEEEEECCCC----------CCHHHHHHHHHc
Confidence 012222222 2233332221 1224679999999999999999943 234789999988
Q ss_pred CCcccceEecCCC
Q 005970 373 GDFSVDGVLSDFP 385 (667)
Q Consensus 373 G~~gVDGIiTD~P 385 (667)
| |||||||+|
T Consensus 284 G---VdgIiTD~~ 293 (293)
T cd08572 284 G---VDGVIYDRV 293 (293)
T ss_pred C---CCEEEecCC
Confidence 8 999999997
No 46
>cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=8.2e-40 Score=332.78 Aligned_cols=209 Identities=18% Similarity=0.172 Sum_probs=163.0
Q ss_pred EEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcccc
Q 005970 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIFSF 489 (667)
Q Consensus 410 iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~i~ 489 (667)
||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+++|+|+ ++|. |.
T Consensus 1 iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~~TkDg~~Vv~HD~~l~r~t~------------------~~g~-v~ 61 (235)
T cd08565 1 IAGHRGGRNLWPENTLEGFRKALELGVDAVEFDVHLTADGEVVVIHDPTLDRTTH------------------GTGA-VR 61 (235)
T ss_pred CEecCCCCCCCCccHHHHHHHHHHcCCCEEEEeEEEccCCCEEEECCChhhcccC------------------CCCc-ee
Confidence 6899999999999999999999999999999999999999999999999999999 6775 99
Q ss_pred cCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHHHH
Q 005970 490 SLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEAL 569 (667)
Q Consensus 490 d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l 569 (667)
++|++||++|+++.++ +++||||+|+|++++... +.++||||.+... .....+++.+++++
T Consensus 62 ~~t~~el~~l~~~~~~---------------~~~iptL~evl~~~~~~~--~~l~iEiK~~~~~--~~~~~~~~~v~~~i 122 (235)
T cd08565 62 DLTLAERKALRLRDSF---------------GEKIPTLEEVLALFAPSG--LELHVEIKTDADG--TPYPGAAALAAATL 122 (235)
T ss_pred eccHHHHhcCCCCCCC---------------CCCCCCHHHHHHHhhccC--cEEEEEECCCCCC--CccHHHHHHHHHHH
Confidence 9999999999987532 378999999999997642 4799999965310 01136889999999
Q ss_pred HhcCCCCCCCceEEEEeCCHHHHHHHHhccCCcEEEEeccchhhhhH--HHHHHHH-HhhhhcCCCeeEEeCCCCCccHH
Q 005970 570 GNAGYNKQTALKVMIQSTDSSVLMKLREKTSYELVYKVKENIRDALN--QTIEDIK-KFADSVVLTMSLYLKRGTSSQTQ 646 (667)
Q Consensus 570 ~~~~~~~~~~~~v~i~SFd~~~L~~~~~~p~~~~~~L~~~~~~~~~~--~~l~~~~-~~a~~i~~~~~i~~~~~~~~~~~ 646 (667)
+++++. ++++|+||++++|++++++|+++++++++........ ..+.... ..+..+++. +. ....+++
T Consensus 123 ~~~~~~----~~v~~~Sf~~~~l~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~ 193 (235)
T cd08565 123 RRHGLL----ERSVLTSFDPAVLTEVRKHPGVRTLGSVDEDMLERLGGELPFLTATALKAHIVAVE----QS-LLAATWE 193 (235)
T ss_pred HhCCCc----CCEEEEECCHHHHHHHHhCCCCcEEEEeccccccccccccchhhhhhccCcEEccC----cc-cccCCHH
Confidence 999987 7999999999999999999999999998632110000 0001111 111112221 11 0123568
Q ss_pred HHHHHHHcCCcEEEEeccCC
Q 005970 647 LWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 647 ~v~~ah~~Gl~V~vWTVn~e 666 (667)
+|+++|+ |++|++||||++
T Consensus 194 ~v~~~~~-g~~v~~WTVn~~ 212 (235)
T cd08565 194 LVRAAVP-GLRLGVWTVNDD 212 (235)
T ss_pred HHHHHhC-CCEEEEEccCCH
Confidence 9999975 999999999974
No 47
>cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=2.4e-39 Score=332.85 Aligned_cols=240 Identities=20% Similarity=0.229 Sum_probs=176.7
Q ss_pred EEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCccc
Q 005970 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (667)
Q Consensus 94 iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~~ 173 (667)
||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|+|++. ..
T Consensus 1 iiaHRG~~~~~pENT~~af~~A~~~g~d--~vE~Dv~~TkDg~~Vv~HD~~l~r~t~~~-------------------~~ 59 (249)
T cd08561 1 VIAHRGGAGLAPENTLLAFEDAVELGAD--VLETDVHATKDGVLVVIHDETLDRTTDGT-------------------GP 59 (249)
T ss_pred CcccCCCCCCCCccHHHHHHHHHHhCCC--EEEEEeeECCCCCEEEECCCccccccCCC-------------------Cc
Confidence 6899999999999999999999999999 99999999999999999999999999953 26
Q ss_pred cccCCHHhhccccccccccCCCC---CCCCCCCccCCHHHHHHhhCCCceEEeccCchhhhhcCCcHHHHHHHHHhhcCC
Q 005970 174 SIDYTLNDLSNIILNQGVYSRTD---KFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV 250 (667)
Q Consensus 174 v~d~t~~el~~l~~~~~~~~~~~---~~~~~~~~iptL~e~l~~~~~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~~ 250 (667)
|.++||+||++++.+.++...+. .+...++++|||+|+|+++++..++||+|.+. ..+++.+++++++++.
T Consensus 60 i~~~t~~el~~l~~~~~~~~~~~~~~~~~~~~~~iptL~evl~~~~~~~~~ieiK~~~------~~~~~~~~~~l~~~~~ 133 (249)
T cd08561 60 VADLTLAELRRLDAGYHFTDDGGRTYPYRGQGIRIPTLEELFEAFPDVRLNIEIKDDG------PAAAAALADLIERYGA 133 (249)
T ss_pred hhhCCHHHHhhcCcCccccCccccccccCCCCccCCCHHHHHHhCcCCcEEEEECCCc------hhHHHHHHHHHHHcCC
Confidence 89999999999998876522111 11222369999999999998889999999653 2467889999998875
Q ss_pred ---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhh-cHHH-HHhhcceecCCCccccccCCCCC
Q 005970 251 ---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLK-NLTF-IKTFASGILVPKDYIWPVDESLY 325 (667)
Q Consensus 251 ---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~-~l~~-i~~~a~~i~~~~~~~~~~~~~~~ 325 (667)
.+++||+...|.++++.. | +.++.+ +. .+ .. ....... ++.. .......+.++... .++
T Consensus 134 ~~~~~~~Sf~~~~l~~~~~~~-p-~~~~~~-~~-~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 197 (249)
T cd08561 134 QDRVLVASFSDRVLRRFRRLC-P-RVATSA-GE-GE-VA-----AFVLASRLGLGSLYSPPYDALQIPVRY------GGV 197 (249)
T ss_pred CCcEEEEECCHHHHHHHHHHC-C-Ccceec-cH-HH-HH-----HHHHHhhcccccccCCCCcEEEcCccc------CCe
Confidence 399999999999999985 2 445443 11 00 00 0000000 0000 00001122221110 011
Q ss_pred CCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhh
Q 005970 326 LLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAA 391 (667)
Q Consensus 326 l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~ 391 (667)
....+.+++.+|++|+.|++||||+. ++|+.++++| ||||+||+|+.+.++
T Consensus 198 ~~~~~~~v~~~~~~G~~v~vWTVN~~------------~~~~~l~~~g---VdgIiTD~p~~~~~~ 248 (249)
T cd08561 198 PLVTPRFVRAAHAAGLEVHVWTVNDP------------AEMRRLLDLG---VDGIITDRPDLLLEV 248 (249)
T ss_pred ecCCHHHHHHHHHCCCEEEEEecCCH------------HHHHHHHhcC---CCEEEcCCHHHHHhh
Confidence 12357899999999999999999753 7899999888 999999999987654
No 48
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=100.00 E-value=1.2e-39 Score=328.95 Aligned_cols=200 Identities=19% Similarity=0.212 Sum_probs=165.2
Q ss_pred EEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcccc
Q 005970 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIFSF 489 (667)
Q Consensus 410 iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~i~ 489 (667)
||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|| ++|. |.
T Consensus 1 iiaHRG~~~~~pENT~~af~~A~~~Gad~vE~DV~~T~Dg~~vv~HD~~l~r~t~------------------~~~~-v~ 61 (220)
T cd08579 1 IIAHRGVSSNGVENTLEALEAAIKAKPDYVEIDVQETKDGQFVVMHDANLKRLAG------------------VNKK-VW 61 (220)
T ss_pred CeeccCCCCCCCccHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEEcCCchhhccC------------------CCCC-hh
Confidence 6899999999999999999999999999999999999999999999999999999 5665 99
Q ss_pred cCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHHHH
Q 005970 490 SLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEAL 569 (667)
Q Consensus 490 d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l 569 (667)
++||+||++++.+.++ . +++||||+|+|+.++++. +.++||||.+.. ....+++.+++++
T Consensus 62 ~~t~~el~~l~~~~~~-------------~-~~~iptL~evl~~~~~~~--~~l~iEiK~~~~----~~~~~~~~v~~~l 121 (220)
T cd08579 62 DLTLEELKKLTIGENG-------------H-GAKIPSLDEYLALAKGLK--QKLLIELKPHGH----DSPDLVEKFVKLY 121 (220)
T ss_pred hCCHHHHhcCcCccCC-------------C-CCcCCCHHHHHHHhhccC--CeEEEEECCCCC----CCHHHHHHHHHHH
Confidence 9999999999987531 2 378999999999998742 479999997653 1246889999999
Q ss_pred HhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCCccHHHH
Q 005970 570 GNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTSSQTQLW 648 (667)
Q Consensus 570 ~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~~~~~~v 648 (667)
+++++. ++++|+||+++.++.+++. |++++++++....... . ...++.+++. ....++++|
T Consensus 122 ~~~~~~----~~v~v~Sf~~~~l~~~~~~~p~~~~~~~~~~~~~~~-----~--~~~~~~~~~~-------~~~~~~~~v 183 (220)
T cd08579 122 KQNLIE----NQHQVHSLDYRVIEKVKKLDPKIKTGYILPFNIGNL-----P--KTNVDFYSIE-------YSTLNKEFI 183 (220)
T ss_pred HHcCCC----cCeEEEeCCHHHHHHHHHHCCCCeEEEEEecccCcc-----c--ccCceEEeee-------hhhcCHHHH
Confidence 999987 7999999999999999999 9999999986432211 0 0111222221 112346999
Q ss_pred HHHHHcCCcEEEEeccCC
Q 005970 649 RSTHITRELVLMELLQNS 666 (667)
Q Consensus 649 ~~ah~~Gl~V~vWTVn~e 666 (667)
+.+|++|++|++||||++
T Consensus 184 ~~~~~~G~~v~~wtvn~~ 201 (220)
T cd08579 184 RQAHQNGKKVYVWTVNDP 201 (220)
T ss_pred HHHHHCCCEEEEEcCCCH
Confidence 999999999999999974
No 49
>cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip
Probab=100.00 E-value=4.4e-39 Score=327.74 Aligned_cols=219 Identities=19% Similarity=0.209 Sum_probs=167.1
Q ss_pred EEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCccc
Q 005970 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (667)
Q Consensus 94 iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~~ 173 (667)
||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|+|++. |+.
T Consensus 1 iiAHRG~~~~~pENT~~af~~a~~~g~d--~vE~Dv~lTkDg~~vv~HD~~l~R~t~~~------------------~~~ 60 (234)
T cd08570 1 VIGHRGYKAKYPENTLLAFEKAVEAGAD--AIETDVHLTKDGVVVISHDPNLKRCFGKD------------------GLI 60 (234)
T ss_pred CEeCCCCCCCCCccHHHHHHHHHHhCCC--EEEEEeeEccCCcEEEeCCCccceeeCCC------------------CCE
Confidence 6899999999999999999999999999 99999999999999999999999999843 137
Q ss_pred cccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhC-----CCceEEeccCchhhhhcCCcHHHHHHHHHhhc
Q 005970 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK-----PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV 248 (667)
Q Consensus 174 v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~-----~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~ 248 (667)
|+++||+||++++++.. + .++||||+|+|++++ +..++||+|..... ..+++.+.++++++
T Consensus 61 v~~~t~~eL~~l~~~~~---------~-~~~iptL~evl~~~~~~~~~~~~l~iEiK~~~~~----~~~~~~v~~~i~~~ 126 (234)
T cd08570 61 IDDSTWDELSHLRTIEE---------P-HQPMPTLKDVLEWLVEHELPDVKLMLDIKRDNDP----EILFKLIAEMLAVK 126 (234)
T ss_pred eccCCHHHHhhcccccC---------C-CccCCcHHHHHHHHHhcCCCCeEEEEEECCCCCH----HHHHHHHHHHHHhc
Confidence 99999999999988632 2 358999999999984 45799999954211 24566777778776
Q ss_pred C-------CceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhh---cceecCCCcccc
Q 005970 249 V-------VNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF---ASGILVPKDYIW 318 (667)
Q Consensus 249 ~-------~~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~---a~~i~~~~~~~~ 318 (667)
+ .++++||++..++.+++.. | +.++++...... . ...+..+ +.++.+.+..+.
T Consensus 127 ~~~~~~~~~v~i~Sf~~~~l~~l~~~~-p-~~~~~~l~~~~~-----------~----~~~~~~~~~~~~~~~~~~~~~~ 189 (234)
T cd08570 127 PDLDFWRERIILGLWHLDFLKYGKEVL-P-GFPVFHIGFSLD-----------Y----ARHFLNYSEKLVGISMHFVSLW 189 (234)
T ss_pred CCcccccCCEEEEeCCHHHHHHHHHhC-C-CCCeEEEEcCHH-----------H----HHHHhccccccceEEeeeehhh
Confidence 4 2389999999999999985 3 566664221100 0 0111111 223333221110
Q ss_pred ccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCC
Q 005970 319 PVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (667)
Q Consensus 319 ~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P 385 (667)
. . .++++++.+|++|++|++||||++ .+|++++++| |||||||+|
T Consensus 190 -----~-~-~~~~~v~~~~~~gl~v~~wTvn~~------------~~~~~l~~~g---vdgiiTD~P 234 (234)
T cd08570 190 -----G-P-FGQAFLPELKKNGKKVFVWTVNTE------------EDMRYAIRLG---VDGVITDDP 234 (234)
T ss_pred -----c-c-cCHHHHHHHHHCCCEEEEEecCCH------------HHHHHHHHCC---CCEEEeCCC
Confidence 0 0 257899999999999999999754 7899999888 999999998
No 50
>cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism.
Probab=100.00 E-value=7.5e-39 Score=336.46 Aligned_cols=252 Identities=15% Similarity=0.131 Sum_probs=175.3
Q ss_pred EEEEeCCCC-------CCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccC
Q 005970 93 FVVARGGFS-------GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVN 165 (667)
Q Consensus 93 ~iiaHRG~~-------~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~ 165 (667)
+.|||||++ +.+||||++||+.|+++|+| +||+|||+||||++||+||.+|+|+|+..+.. +
T Consensus 1 ~~iaHRG~~~~~~~~~~~~PENTl~af~~A~~~Gad--~iE~DV~lTkDg~~VV~HD~~l~r~~~~~~~~---------~ 69 (290)
T cd08607 1 LDVGHRGAGNSYTAASAVVRENTIASFLQAAEHGAD--MVEFDVQLTKDLVPVVYHDFTLRVSLKSKGDS---------D 69 (290)
T ss_pred CceecCCCCcCcccccCCCCccHHHHHHHHHHcCCC--EEEEEEEEccCCeEEEEcCCeeEeeccCcccc---------C
Confidence 468999984 89999999999999999999 99999999999999999999999999853211 1
Q ss_pred CCCCCccccccCCHHhhccccccccccCCCCCCCC--------CCCccCCHHHHHHhhC-CCceEEeccCchhhhhc---
Q 005970 166 GVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDG--------NGFQILTVQDMARQIK-PPGLWLNIQHDAFYAQH--- 233 (667)
Q Consensus 166 g~~~~g~~v~d~t~~el~~l~~~~~~~~~~~~~~~--------~~~~iptL~e~l~~~~-~~~~~ieiK~~~~~~~~--- 233 (667)
+.+..++.|.++||+||++++++.++......|.+ .+.+||||+|+|++++ +.+++||||.+......
T Consensus 70 ~~~~~~~~v~~lt~~eL~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~iPtL~evl~~~~~~~~lnIEiK~~~~~~~~~~~ 149 (290)
T cd08607 70 RDDLLEVPVKDLTYEQLKLLKLFHISALKVKEYKSVEEDEDPPEHQPFPTLSDVLESVPEDVGFNIEIKWPQQQKDGSWE 149 (290)
T ss_pred ccceEEEecccCCHHHHhhcCcccccccccccccccccccccccccCCCCHHHHHHhCCCccceEEEEecCccccccccc
Confidence 11122357999999999999987543222222321 1358999999999986 46799999965421110
Q ss_pred --------CCcHHHHHHHHHhhcCC---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhh-cHH
Q 005970 234 --------NLSMRSFVLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLK-NLT 301 (667)
Q Consensus 234 --------~~~~~~~l~~~l~~~~~---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~-~l~ 301 (667)
...+++.+++.+.+++. ++++||++.+|..+++.. | ..++.+ +..... . ....+.+... .+.
T Consensus 150 ~~~~~~~~~~~~~~~v~~~i~~~~~~~~v~isSF~~~~l~~~~~~~-p-~~~~~~-l~~~~~-~--~~~~~~~~~~~~~~ 223 (290)
T cd08607 150 SELFTYFDRNLFVDIILKIVLEHAGKRRIIFSSFDADICTMLRFKQ-N-KYPVLF-LTQGKT-Q--RYPEFMDLRTRTFE 223 (290)
T ss_pred cccccccchhHHHHHHHHHHHHhCCCCCEEEEcCCHHHHHHHHHhC-c-CCCEEE-EecCCC-C--ccccccchHHHhHH
Confidence 01366778888887764 499999999999999986 3 577775 332111 0 0000111100 011
Q ss_pred HHHhh-----cceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEec--cCCCCcccCCCCChHHHHHHHHhCCC
Q 005970 302 FIKTF-----ASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNF--ANDIPISFNYSYDPLTEYLSFIDNGD 374 (667)
Q Consensus 302 ~i~~~-----a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTv--n~~~~~~~~~~~d~~~e~~~li~~G~ 374 (667)
....+ +.++.+... ++...+.+|+.+|++|++|++||| |+ .++|++++++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~v~~~~~~Gl~v~~wTv~~n~------------~~~~~~l~~~G- 281 (290)
T cd08607 224 IAVNFAQAEELLGVNLHSE---------DLLKDPSQIELAKSLGLVVFCWGDDLND------------PENRKKLKELG- 281 (290)
T ss_pred HHHHHHHHcCCceeEechh---------hhhcChHHHHHHHHcCCEEEEECCCCCC------------HHHHHHHHHcC-
Confidence 11111 122222111 122357899999999999999999 53 47899999888
Q ss_pred cccceEecCCC
Q 005970 375 FSVDGVLSDFP 385 (667)
Q Consensus 375 ~gVDGIiTD~P 385 (667)
|||||||++
T Consensus 282 --VdgIiTD~~ 290 (290)
T cd08607 282 --VDGLIYDRI 290 (290)
T ss_pred --CCEEEecCC
Confidence 999999986
No 51
>cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism.
Probab=100.00 E-value=4e-39 Score=338.53 Aligned_cols=235 Identities=17% Similarity=0.131 Sum_probs=168.5
Q ss_pred eEEEecCCC-------CCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccc
Q 005970 409 LVISKNGAS-------GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIM 481 (667)
Q Consensus 409 ~iiaHRG~~-------~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~ 481 (667)
+.|||||++ +.+||||++||+.|+++|||+||+|||+||||++||+||.+|+|+++... ..++.
T Consensus 1 ~~iaHRG~~~~~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTkDg~~VV~HD~~l~r~~~~~~---------~~~~~ 71 (290)
T cd08607 1 LDVGHRGAGNSYTAASAVVRENTIASFLQAAEHGADMVEFDVQLTKDLVPVVYHDFTLRVSLKSKG---------DSDRD 71 (290)
T ss_pred CceecCCCCcCcccccCCCCccHHHHHHHHHHcCCCEEEEEEEEccCCeEEEEcCCeeEeeccCcc---------ccCcc
Confidence 368999984 89999999999999999999999999999999999999999999987210 00000
Q ss_pred cCCCcccccCCHHHHcccCCCccCCcccccccCCCCCC---------CCccccCHHHHHHHHHhcCCcceEEEEeecchh
Q 005970 482 AGSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNK---------NAGKFMKLSDFLEMAKNANSLSGVLISIENAVY 552 (667)
Q Consensus 482 ~~~g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~---------~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~ 552 (667)
.+....|.++||+||++|+++.+..+ + .+.|. .+++||||+|+|+.++.. ++++||||.+..
T Consensus 72 ~~~~~~v~~lt~~eL~~l~~~~~~~~--~----~~~~~~~~~~~~~~~~~~iPtL~evl~~~~~~---~~lnIEiK~~~~ 142 (290)
T cd08607 72 DLLEVPVKDLTYEQLKLLKLFHISAL--K----VKEYKSVEEDEDPPEHQPFPTLSDVLESVPED---VGFNIEIKWPQQ 142 (290)
T ss_pred ceEEEecccCCHHHHhhcCccccccc--c----cccccccccccccccccCCCCHHHHHHhCCCc---cceEEEEecCcc
Confidence 11122499999999999998753211 1 11121 147899999999999764 579999997542
Q ss_pred hhhh----------hcccHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccch------hhhh
Q 005970 553 LAEK----------QGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENI------RDAL 615 (667)
Q Consensus 553 ~~~~----------~~~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~------~~~~ 615 (667)
.... ....+++.+++++.++++. ++++|+|||+++|..++++ |++++++|+.... .+..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~----~~v~isSF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~ 218 (290)
T cd08607 143 QKDGSWESELFTYFDRNLFVDIILKIVLEHAGK----RRIIFSSFDADICTMLRFKQNKYPVLFLTQGKTQRYPEFMDLR 218 (290)
T ss_pred ccccccccccccccchhHHHHHHHHHHHHhCCC----CCEEEEcCCHHHHHHHHHhCcCCCEEEEecCCCCccccccchH
Confidence 1100 0113778999999998876 6999999999999999999 9999999986421 0111
Q ss_pred HHHHHHHHHhhhhcCCCeeEEeCCCCCccHHHHHHHHHcCCcEEEEec--cC
Q 005970 616 NQTIEDIKKFADSVVLTMSLYLKRGTSSQTQLWRSTHITRELVLMELL--QN 665 (667)
Q Consensus 616 ~~~l~~~~~~a~~i~~~~~i~~~~~~~~~~~~v~~ah~~Gl~V~vWTV--n~ 665 (667)
...+.....++...++............++++|+.+|++|+.|++||| |+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Gl~v~~wTv~~n~ 270 (290)
T cd08607 219 TRTFEIAVNFAQAEELLGVNLHSEDLLKDPSQIELAKSLGLVVFCWGDDLND 270 (290)
T ss_pred HHhHHHHHHHHHHcCCceeEechhhhhcChHHHHHHHHcCCEEEEECCCCCC
Confidence 111222233444444331111112233467999999999999999999 76
No 52
>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.
Probab=100.00 E-value=6.4e-39 Score=325.80 Aligned_cols=210 Identities=22% Similarity=0.246 Sum_probs=169.9
Q ss_pred eeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcc
Q 005970 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIF 487 (667)
Q Consensus 408 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~ 487 (667)
++||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|| ++|.
T Consensus 1 ~~iiaHRG~~~~~pENT~~Af~~A~~~g~~~vE~DV~~TkDg~~Vv~HD~~l~r~t~------------------~~~~- 61 (230)
T cd08563 1 TLIFAHRGYSGTAPENTLLAFKKAIEAGADGIELDVHLTKDGQLVVIHDETVDRTTN------------------GKGY- 61 (230)
T ss_pred CeEEEccCCCCCCCchhHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCCCcccccC------------------CCCc-
Confidence 478999999999999999999999999999999999999999999999999999998 6665
Q ss_pred cccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHH
Q 005970 488 SFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVME 567 (667)
Q Consensus 488 i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~ 567 (667)
|.++||+||++++.+..+. +.+. +++||||+|+|+.+++.+ +.++||+|.+.... ..+++.+++
T Consensus 62 i~~~t~~el~~l~~~~~~~---------~~~~-~~~iptL~evl~~~~~~~--~~l~leiK~~~~~~----~~~~~~l~~ 125 (230)
T cd08563 62 VKDLTLEELKKLDAGSWFD---------EKFT-GEKIPTLEEVLDLLKDKD--LLLNIEIKTDVIHY----PGIEKKVLE 125 (230)
T ss_pred hhhCCHHHHHhcCCCCccC---------ccCC-CCcCCCHHHHHHHHHhcC--cEEEEEECCCCCcC----hhHHHHHHH
Confidence 9999999999999876431 2333 478999999999998642 47999999765421 357899999
Q ss_pred HHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCCccHH
Q 005970 568 ALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTSSQTQ 646 (667)
Q Consensus 568 ~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~~~~~ 646 (667)
+++++++. ++++++||+++.|..+++. |++++++++...... ...++...++. .+.+. ....+++
T Consensus 126 ~l~~~~~~----~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~--------~~~~~~~~~~~-~v~~~-~~~~~~~ 191 (230)
T cd08563 126 LVKEYNLE----DRVIFSSFNHESLKRLKKLDPKIKLALLYETGLQD--------PKDYAKKIGAD-SLHPD-FKLLTEE 191 (230)
T ss_pred HHHHcCCC----CCEEEEcCCHHHHHHHHHHCCCCcEEEEecCcccC--------HHHHHHHhCCE-EEccC-chhcCHH
Confidence 99999977 7999999999999999999 999999988642211 11222222221 12221 1123579
Q ss_pred HHHHHHHcCCcEEEEeccCC
Q 005970 647 LWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 647 ~v~~ah~~Gl~V~vWTVn~e 666 (667)
+++.+|++|++|++||||+.
T Consensus 192 ~i~~~~~~g~~v~~Wtvn~~ 211 (230)
T cd08563 192 VVEELKKRGIPVRLWTVNEE 211 (230)
T ss_pred HHHHHHHCCCEEEEEecCCH
Confidence 99999999999999999974
No 53
>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp
Probab=100.00 E-value=1e-38 Score=334.73 Aligned_cols=247 Identities=15% Similarity=0.186 Sum_probs=176.4
Q ss_pred CEEEEeCCCCCCCC--------ccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccc
Q 005970 92 PFVVARGGFSGIFP--------DSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYL 163 (667)
Q Consensus 92 ~~iiaHRG~~~~~p--------ENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~ 163 (667)
+.||||||+++.+| |||++||+.|+++|+| +||+|||+||||++||+||.+++|| +..
T Consensus 2 ~~iiaHRG~~~~~p~~~~~~~pENTl~af~~A~~~g~d--~vE~DV~lTkDg~~VV~HD~~l~rt-~~~----------- 67 (286)
T cd08606 2 VQVIGHRGLGKNTAERKSLQLGENTVESFILAASLGAS--YVEVDVQLTKDLVPVIYHDFLVSET-GTD----------- 67 (286)
T ss_pred ceEEEeCCCCCCcccccccCcCcchHHHHHHHHHcCCC--EEEEEEEEccCCEEEEeCCCeeccC-CCC-----------
Confidence 67999999999999 9999999999999999 9999999999999999999999995 421
Q ss_pred cCCCCCCccccccCCHHhhcccccc---ccccCCCCCCC----CC--CCccCCHHHHHHhhCC-CceEEeccCchhhhhc
Q 005970 164 VNGVPTPGWFSIDYTLNDLSNIILN---QGVYSRTDKFD----GN--GFQILTVQDMARQIKP-PGLWLNIQHDAFYAQH 233 (667)
Q Consensus 164 ~~g~~~~g~~v~d~t~~el~~l~~~---~~~~~~~~~~~----~~--~~~iptL~e~l~~~~~-~~~~ieiK~~~~~~~~ 233 (667)
+.|.++||+||++++.. .++ ....|. |. ..+||||+|+|+.++. .+++||||.+......
T Consensus 68 --------~~v~~lt~~eL~~ld~~~~~~~~--~~~~~~~~~~g~~~~~~iptL~evl~~~~~~~~l~IEiK~~~~~~~~ 137 (286)
T cd08606 68 --------VPIHDLTLEQFLHLSRMKYTVDF--KKKGFKGNSRGHSIQAPFTTLEELLKKLPKSVGFNIELKYPMLHEAE 137 (286)
T ss_pred --------CccccCCHHHHHhhhcccccccc--cccCCCCcccccccccCCCcHHHHHHhCCCccceEEEEecCCcchhh
Confidence 26999999999999743 222 122232 21 1369999999999864 6899999975422110
Q ss_pred C----------CcHHHHHHHHHhhcCC---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcH
Q 005970 234 N----------LSMRSFVLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNL 300 (667)
Q Consensus 234 ~----------~~~~~~l~~~l~~~~~---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l 300 (667)
. ..+++.+++++++++. ++++||++..|+.+++.. | ..++.+ +..... .+....... .+
T Consensus 138 ~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~vi~sSF~~~~l~~~~~~~-p-~~~~~~-l~~~~~-~~~~~~~~~----~~ 209 (286)
T cd08606 138 EEEVAPVAIELNAFVDTVLEKVFDYGAGRNIIFSSFTPDICILLSLKQ-P-GYPVLF-LTEAGK-APDMDVRAA----SL 209 (286)
T ss_pred hcccccchhHHHHHHHHHHHHHHhcCCCCceEEEcCCHHHHHHHHhhC-c-CCCEEE-EeCCCC-CccCCchhh----cH
Confidence 0 1356788999998875 489999999999999986 3 577775 332111 000000000 01
Q ss_pred HHHHhh-----cceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCc
Q 005970 301 TFIKTF-----ASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDF 375 (667)
Q Consensus 301 ~~i~~~-----a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~ 375 (667)
.....+ +.++.+.... +...+.+|+.+|++|++|++|||.+ |+.++|++++++|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~v~~~~~~Gl~v~~WTv~~----------n~~~~~~~l~~~G-- 268 (286)
T cd08606 210 QEAIRFAKQWNLLGLVSAAEP---------LVMCPRLIQVVKRSGLVCVSYGVLN----------NDPENAKTQVKAG-- 268 (286)
T ss_pred HHHHHHHHHCCCeEEEechHH---------hhhChHHHHHHHHCCcEEEEECCcc----------CCHHHHHHHHHcC--
Confidence 111111 2222221111 1224679999999999999999932 1247899999888
Q ss_pred ccceEecCCCCCchhhh
Q 005970 376 SVDGVLSDFPLTPSAAV 392 (667)
Q Consensus 376 gVDGIiTD~P~~~~~~l 392 (667)
|||||||+|+.+++.+
T Consensus 269 -VdgIiTD~p~~~~~~~ 284 (286)
T cd08606 269 -VDAVIVDSVLAIRRGL 284 (286)
T ss_pred -CCEEEECCHHHHHHHh
Confidence 9999999999887765
No 54
>cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=1.1e-38 Score=324.63 Aligned_cols=210 Identities=20% Similarity=0.260 Sum_probs=166.4
Q ss_pred EEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcccc
Q 005970 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIFSF 489 (667)
Q Consensus 410 iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~i~ 489 (667)
||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+++|+|| ++|. |.
T Consensus 1 iiaHRG~~~~~pENTl~af~~A~~~G~~~vE~Dv~lTkDg~~Vv~HD~~l~r~t~------------------~~~~-i~ 61 (233)
T cd08582 1 VIAHRGASAEAPENTLAAFELAWEQGADGIETDVRLTKDGELVCVHDPTLKRTSG------------------GDGA-VS 61 (233)
T ss_pred CEeCCCCCCCCCchHHHHHHHHHHcCCCEEEEEEEEccCCCEEEecCCccccccC------------------CCcc-hh
Confidence 6899999999999999999999999999999999999999999999999999999 6665 99
Q ss_pred cCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHHHH
Q 005970 490 SLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEAL 569 (667)
Q Consensus 490 d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l 569 (667)
++||+||++++++.++ ...+. +++||||+|+|+.+++.+ +.++||||.+. ....+++.+++++
T Consensus 62 ~~t~~el~~l~~~~~~---------~~~~~-~~~iptL~evl~~~~~~~--~~l~ieiK~~~-----~~~~~~~~~~~~~ 124 (233)
T cd08582 62 DLTLAELRKLDIGSWK---------GESYK-GEKVPTLEEYLAIVPKYG--KKLFIEIKHPR-----RGPEAEEELLKLL 124 (233)
T ss_pred hCCHHHHhcCCCCccc---------CCCCC-CCcCCCHHHHHHHHHhcC--ceEEEEeCCCc-----cCccHHHHHHHHH
Confidence 9999999999987643 23344 389999999999998852 47999999751 1246889999999
Q ss_pred HhcC-CCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCCccHHH
Q 005970 570 GNAG-YNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTSSQTQL 647 (667)
Q Consensus 570 ~~~~-~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~~~~~~ 647 (667)
++++ +. ++++++||++..|..+++. |++++++++......... .. .+...++. .+.+......++++
T Consensus 125 ~~~~~~~----~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~---~~---~~~~~~~~-~i~~~~~~~~~~~~ 193 (233)
T cd08582 125 KESGLLP----EQIVIISFDAEALKRVRELAPTLETLWLRNYKSPKEDP---RP---LAKSGGAA-GLDLSYEKKLNPAF 193 (233)
T ss_pred HHcCCCC----CCEEEEecCHHHHHHHHHHCCCCcEEEEeccCccccch---hH---HHHhhCce-EEcccccccCCHHH
Confidence 9995 44 6999999999999999999 999999998642110000 00 11111221 11111111245799
Q ss_pred HHHHHHcCCcEEEEeccCC
Q 005970 648 WRSTHITRELVLMELLQNS 666 (667)
Q Consensus 648 v~~ah~~Gl~V~vWTVn~e 666 (667)
|+.+|++|++|++||||+.
T Consensus 194 v~~~~~~G~~v~~wTvn~~ 212 (233)
T cd08582 194 IKALRDAGLKLNVWTVDDA 212 (233)
T ss_pred HHHHHHCCCEEEEEeCCCH
Confidence 9999999999999999974
No 55
>cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation.
Probab=100.00 E-value=3.4e-39 Score=338.92 Aligned_cols=230 Identities=19% Similarity=0.213 Sum_probs=165.1
Q ss_pred ccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCcccccccccc
Q 005970 403 SKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMA 482 (667)
Q Consensus 403 ~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~ 482 (667)
...+++.||||||+++.+||||++||++|+++|||+||+|||+||||++||+||.+|+|+||... .++++
T Consensus 18 ~~~~~~~IiAHRGa~~~aPENTl~AF~~A~~~Gad~IE~DV~lTkDG~lVV~HD~tL~Rtt~~~~-~~~~~--------- 87 (316)
T cd08610 18 TLGPKPTIIGHRGAPMLAPENTMMSFEKAIEHGAHGLETDVTLSYDGVPFLMHDFTLKRTTNIGE-VQPES--------- 87 (316)
T ss_pred ccCCCCeEEECCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEEccCCCEEEeCCCccccccCCCC-ccccc---------
Confidence 34566889999999999999999999999999999999999999999999999999999999432 12222
Q ss_pred CCCcccccCCHHHHcccCCCccCC----ccccc-c--cCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhh
Q 005970 483 GSGIFSFSLIWDEIQTLIPQISNP----YFKFK-L--FRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAE 555 (667)
Q Consensus 483 ~~g~~i~d~t~~EL~~L~~~~~~p----~~~~~-~--~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~ 555 (667)
..|. |.++||+||+++++|.++. |...+ . +....+.+ ++||||+|+|+++++.+ ..++||||.+....
T Consensus 88 ~~~~-V~~~TlaEL~~ld~g~wf~~~~~~~~~~~~~~~~~~~~~~-e~IPTLeEvL~~~~~~~--~~l~IEIK~~~~~~- 162 (316)
T cd08610 88 ACEN-PAFFNWDFLSTLNAGKWFVKPRPFYNMKPLSEADKERARN-QSIPKLSNFLRLAEKEN--KLVIFDLYRPPPKH- 162 (316)
T ss_pred cccc-hhhCCHHHHhhCCCCCccCcccccccccccccccccccCC-CCCCCHHHHHHHhHhcC--ceEEEEeCCCcccC-
Confidence 2343 9999999999999997652 10000 0 00113343 89999999999998742 36999999642110
Q ss_pred hhcccHHHHHHHHH-HhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCe
Q 005970 556 KQGMSVTNSVMEAL-GNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTM 633 (667)
Q Consensus 556 ~~~~~~~~~v~~~l-~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~ 633 (667)
.....+++.+++++ +++++. +++++ ||+++++..+++. |++++++.... . +..+. ..++.
T Consensus 163 ~~~~~~~~~v~~~i~~~~~~~----~~~v~-sf~~~~l~~~~~~~P~~~~~l~~~~-----~---~~~l~----~~~~~- 224 (316)
T cd08610 163 PYRHTWIRRVLEVILNEVGIE----QHLVL-WLPAHDRQYVQSVAPGFKQHVGRKV-----P---IETLL----KNNIS- 224 (316)
T ss_pred cchhHHHHHHHHHHHHHcCCC----CCEEE-EcCHHHHHHHHHHCcchhhhhcccc-----c---HHHHH----HcCCe-
Confidence 01124778888886 677886 56655 6999999999999 99986653221 0 11111 12221
Q ss_pred eEEeCCCCCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 634 SLYLKRGTSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 634 ~i~~~~~~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
.+.+.. ...++++|+++|++|++|++||||++
T Consensus 225 ~l~~~~-~~l~~~~v~~a~~~Gl~V~vWTVNd~ 256 (316)
T cd08610 225 ILNLAY-KKLFSNDIRDYKAANIHTNVYVINEP 256 (316)
T ss_pred EEccch-hhCCHHHHHHHHHCCCEEEEECCCCH
Confidence 222211 12356999999999999999999974
No 56
>cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=8.6e-39 Score=335.24 Aligned_cols=240 Identities=16% Similarity=0.184 Sum_probs=174.8
Q ss_pred eEEEecCCC--------CCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCcccccccc
Q 005970 409 LVISKNGAS--------GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEI 480 (667)
Q Consensus 409 ~iiaHRG~~--------~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~ 480 (667)
+||||||++ +.+||||++||+.|+++|||+||+|||+||||++||+||.+|+|+++.... .++
T Consensus 1 ~viaHRG~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDG~lVv~HD~~l~r~~~~~~~---------~~~ 71 (293)
T cd08572 1 LVIGHRGLGKNYASGSLAGIRENTIASFLAAAKHGADMVEFDVQLTKDGVPVIYHDFTISVSEKSKTG---------SDE 71 (293)
T ss_pred CceEecCCCCCcCcccccCcCcccHHHHHHHHHcCCCEEEEEEEEccCCeEEEEcCCcceeecccccc---------ccc
Confidence 589999997 789999999999999999999999999999999999999999999984321 111
Q ss_pred ccCCCcccccCCHHHHcccCCCccCCccc---cc---ccCC---CCCCCCccccCHHHHHHHHHhcCCcceEEEEeecch
Q 005970 481 MAGSGIFSFSLIWDEIQTLIPQISNPYFK---FK---LFRN---PKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAV 551 (667)
Q Consensus 481 ~~~~g~~i~d~t~~EL~~L~~~~~~p~~~---~~---~~~~---~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~ 551 (667)
..+.+..|.++|++||++|+++.+.+... ++ .... ..+. +++||||+|+|+.++.. ++++||||.+.
T Consensus 72 ~~g~~~~v~~lT~~eL~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~iptL~evL~~~~~~---~~l~IEiK~~~ 147 (293)
T cd08572 72 GELIEVPIHDLTLEQLKELGLQHISALKRKALTRKAKGPKPNPWGMDE-HDPFPTLQEVLEQVPKD---LGFNIEIKYPQ 147 (293)
T ss_pred CcceeeehhhCcHHHHHhccccccccccccccccccccCCccccchhh-ccCCCCHHHHHHhCCCc---cceEEEEecCC
Confidence 11223359999999999999986532100 00 0000 0122 37899999999999764 57999999755
Q ss_pred hhhh--------hhcccHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchh-----hhhHH
Q 005970 552 YLAE--------KQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIR-----DALNQ 617 (667)
Q Consensus 552 ~~~~--------~~~~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~-----~~~~~ 617 (667)
.... .....+++.++++++++++. ++++++|||+++|..+++. |+++++++++.... +....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~vl~~i~~~~~~----~~vv~~SF~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~ 223 (293)
T cd08572 148 LLEDGEGELTPYFERNAFVDTILAVVFEHAGG----RRIIFSSFDPDICIMLRLKQNKYPVLFLTNGGTNEVEHMDPRRR 223 (293)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHhCCC----CcEEEECCCHHHHHHHHhhCccCCEEEEecCCCCcccccchhhh
Confidence 3210 00125789999999999987 7999999999999999999 99999999864221 11122
Q ss_pred HHHHHHHhhhhcCCCeeEEeCCCCCccHHHHHHHHHcCCcEEEEec--cC
Q 005970 618 TIEDIKKFADSVVLTMSLYLKRGTSSQTQLWRSTHITRELVLMELL--QN 665 (667)
Q Consensus 618 ~l~~~~~~a~~i~~~~~i~~~~~~~~~~~~v~~ah~~Gl~V~vWTV--n~ 665 (667)
.+..+..++...++.........+..++++|+.+|++|+.|++||| |+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Gl~v~~wTv~~n~ 273 (293)
T cd08572 224 SLQAAVNFALAEGLLGVVLHAEDLLKNPSLISLVKALGLVLFTYGDDNND 273 (293)
T ss_pred hHHHHHHHHHHCCCeEEEechHHhhcCcHHHHHHHHcCcEEEEECCCCCC
Confidence 2344445555555442111111123456999999999999999999 65
No 57
>cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function.
Probab=100.00 E-value=2.1e-38 Score=323.64 Aligned_cols=232 Identities=20% Similarity=0.170 Sum_probs=171.3
Q ss_pred EEEEeCCCCCC-CCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCc
Q 005970 93 FVVARGGFSGI-FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (667)
Q Consensus 93 ~iiaHRG~~~~-~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g 171 (667)
+||||||+++. +||||++||+.|++.|+| +||+|||+||||++||+||.+++|+|++.
T Consensus 1 ~iiaHRG~~~~~~pENTl~af~~A~~~g~d--~iE~DV~~T~Dg~~vv~HD~~l~r~t~~~------------------- 59 (240)
T cd08566 1 LVVAHRGGWGAGAPENSLAAIEAAIDLGAD--IVEIDVRRTKDGVLVLMHDDTLDRTTNGK------------------- 59 (240)
T ss_pred CeEecCCCCCCCCCccHHHHHHHHHHcCCC--EEEEEeeEcCCCCEEEECCCCCccccCCC-------------------
Confidence 48999999999 999999999999999999 99999999999999999999999999943
Q ss_pred cccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCC-CceEEeccCchhhhhcCCcHHHHHHHHHhhcCC
Q 005970 172 WFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV 250 (667)
Q Consensus 172 ~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~-~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~~ 250 (667)
+.|.++||+||++++++.++ ..|.+ ++||||+|+|+++++ ..++||+|.+ ..+.+++++++++.
T Consensus 60 ~~v~~~t~~el~~l~~~~~~----~~~~~--~~iptL~evl~~~~~~~~l~iEiK~~---------~~~~~~~~~~~~~~ 124 (240)
T cd08566 60 GKVSDLTLAEIRKLRLKDGD----GEVTD--EKVPTLEEALAWAKGKILLNLDLKDA---------DLDEVIALVKKHGA 124 (240)
T ss_pred CchhhCcHHHHHhCCcCCCc----CCCCC--CCCCCHHHHHHhhhcCcEEEEEECch---------HHHHHHHHHHHcCC
Confidence 27999999999999998874 33444 699999999999865 6799999964 24668888888876
Q ss_pred c---eEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHh-hcceecCCCccccccCCCCCC
Q 005970 251 N---YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDYIWPVDESLYL 326 (667)
Q Consensus 251 ~---~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~~~~~~~~~~l 326 (667)
. +++||++..++.+++.. | .+++.+ +.... . ...... ...+.. .+.++.+.+...
T Consensus 125 ~~~v~~~sf~~~~l~~~~~~~-p-~~~~~~-l~~~~--~----~~~~~~---~~~~~~~~~~~~~~~~~~~--------- 183 (240)
T cd08566 125 LDQVIFKSYSEEQAKELRALA-P-EVMLMP-IVRDA--E----DLDEEE---ARAIDALNLLAFEITFDDL--------- 183 (240)
T ss_pred cccEEEEECCHHHHHHHHHhC-C-CCEEEE-EEccC--c----chhHHH---HhcccccceEEEEEecccc---------
Confidence 3 99999999999999985 3 566664 32211 0 000000 000000 012222211110
Q ss_pred CCChHHHHHHHHc-CCeEEEEeccCCCCcc-cCCCCChHHHHHHHHhCCCcccceEecCCC
Q 005970 327 LPHTTIVLDAHKE-RLEVFASNFANDIPIS-FNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (667)
Q Consensus 327 ~~~~~~v~~ah~~-Gl~V~~WTvn~~~~~~-~~~~~d~~~e~~~li~~G~~gVDGIiTD~P 385 (667)
.....+..+|+. |++|++||+|++.... -....++..+|++++++| ||||+||+|
T Consensus 184 -~~~~~~~~~~~~~Gl~v~~wTvn~~~~~~~~~~~~~~~~~~~~l~~~G---vd~I~TD~P 240 (240)
T cd08566 184 -DLPPLFDELLRALGIRVWVNTLGDDDTAGLDRALSDPREVWGELVDAG---VDVIQTDRP 240 (240)
T ss_pred -ccHHHHHHHHHhCCCEEEEECCCcccccchhhhhhCchhHHHHHHHcC---CCEEecCCC
Confidence 135678888887 9999999998631100 001113468899999888 999999998
No 58
>cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=5.3e-39 Score=326.91 Aligned_cols=207 Identities=16% Similarity=0.064 Sum_probs=160.4
Q ss_pred eeEEEecCCCCC---CCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCC
Q 005970 408 LLVISKNGASGD---YPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGS 484 (667)
Q Consensus 408 ~~iiaHRG~~~~---~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~ 484 (667)
..+|||||+++. +||||++||++|++.|+ +||+|||+||||++||+||.+|+|+|| ++
T Consensus 4 ~~~iaHRG~~~~~~~~pENTl~af~~A~~~G~-~iE~DV~lT~Dg~lVv~HD~~l~r~t~------------------~~ 64 (237)
T cd08585 4 DRPIAHRGLHDRDAGIPENSLSAFRAAAEAGY-GIELDVQLTADGEVVVFHDDNLKRLTG------------------VE 64 (237)
T ss_pred CCceECCCCCCCCCCCCccHHHHHHHHHHcCC-cEEEEeeECCCCCEEEeccchHhhhcC------------------CC
Confidence 457899999874 79999999999999999 899999999999999999999999999 66
Q ss_pred CcccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHH
Q 005970 485 GIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNS 564 (667)
Q Consensus 485 g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~ 564 (667)
|. |.++||+||++|+++. . +++||||+|+|+.++.. +.++||||.+.. ....+++.
T Consensus 65 ~~-v~~~t~~eL~~l~~~~---------------~-~~~iPtL~evl~~~~~~---~~l~iEiK~~~~----~~~~l~~~ 120 (237)
T cd08585 65 GR-VEELTAAELRALRLLG---------------T-DEHIPTLDEVLELVAGR---VPLLIELKSCGG----GDGGLERR 120 (237)
T ss_pred Cc-cccCCHHHHhcCCCCC---------------C-CCCCCCHHHHHHHhccC---ceEEEEEccCCc----cchHHHHH
Confidence 75 9999999999999863 1 37899999999999754 479999997543 12468889
Q ss_pred HHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHH-----HHHHHHhhhhcCCCeeEEeC
Q 005970 565 VMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQT-----IEDIKKFADSVVLTMSLYLK 638 (667)
Q Consensus 565 v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~-----l~~~~~~a~~i~~~~~i~~~ 638 (667)
+++++++++ .+++|+|||+++|+++++. |++++++++........... ...+. .....++. .+.+.
T Consensus 121 v~~~l~~~~------~~v~i~SF~~~~l~~l~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~ 192 (237)
T cd08585 121 VLAALKDYK------GPAAIMSFDPRVVRWFRKLAPGIPRGQLSEGSNDEADPAFWNEALLSALF-SNLLTRPD-FIAYH 192 (237)
T ss_pred HHHHHHhcC------CCEEEEECCHHHHHHHHHHCCCCCEEEEecCCcccccccchhHHHHHhhh-hhhccCCC-EEEeC
Confidence 999998763 4899999999999999999 99999999864211100000 00110 01112332 12221
Q ss_pred CCCCccHHHHHHHHHc-CCcEEEEeccCC
Q 005970 639 RGTSSQTQLWRSTHIT-RELVLMELLQNS 666 (667)
Q Consensus 639 ~~~~~~~~~v~~ah~~-Gl~V~vWTVn~e 666 (667)
.. ..+.++|+.+|++ |++|++||||++
T Consensus 193 ~~-~~~~~~v~~~~~~~G~~v~vWTVnd~ 220 (237)
T cd08585 193 LD-DLPNPFVTLARALLGMPVIVWTVRTE 220 (237)
T ss_pred hh-hCcCHHHHHHHHhcCCcEEEEeCCCH
Confidence 11 2345899999999 999999999974
No 59
>cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4.
Probab=100.00 E-value=1.1e-38 Score=330.32 Aligned_cols=225 Identities=18% Similarity=0.199 Sum_probs=165.6
Q ss_pred eeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcc
Q 005970 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIF 487 (667)
Q Consensus 408 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~ 487 (667)
|+||||||+++.+||||++||++|+++|||+||+|||+||||++||+||.+|+|+|| ++|.
T Consensus 1 p~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~------------------~~~~- 61 (264)
T cd08575 1 PLHIAHRGGAAEFPENTIAAFRHAVKNGADMLELDVQLTKDGQVVVFHDWDLDRLTG------------------GSGL- 61 (264)
T ss_pred CeEEEeCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEEcCCcccceeC------------------CceE-
Confidence 579999999999999999999999999999999999999999999999999999999 6675
Q ss_pred cccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHH
Q 005970 488 SFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVME 567 (667)
Q Consensus 488 i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~ 567 (667)
|.++|++||++++++.++..........+.+. +++||||+|+|+.+++ +.++||||.+.. ..+++.+++
T Consensus 62 v~~~t~~el~~l~~~~~~~~~~~~~~~~~~~~-~~~iptL~evl~~~~~----~~l~iEiK~~~~------~~~~~~v~~ 130 (264)
T cd08575 62 VSDLTYAELPPLDAGYGYTFDGGKTGYPRGGG-DGRIPTLEEVFKAFPD----TPINIDIKSPDA------EELIAAVLD 130 (264)
T ss_pred EecCCHHHHHhcccCCccccCCCCcccccCCC-CCcCCcHHHHHHhCCC----CeEEEEECCCCH------HHHHHHHHH
Confidence 99999999999999865421100000111233 4799999999999865 379999997542 268899999
Q ss_pred HHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhh---HHH-H--HHHHHhhhhcCCC-eeE----
Q 005970 568 ALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDAL---NQT-I--EDIKKFADSVVLT-MSL---- 635 (667)
Q Consensus 568 ~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~---~~~-l--~~~~~~a~~i~~~-~~i---- 635 (667)
+++++++. ++++|+|||+++|++++++ |+++++++......... ... . ...+..+..+++. ..+
T Consensus 131 ~i~~~~~~----~~~~~~Sf~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (264)
T cd08575 131 LLEKYKRE----DRTVWGSTNPEYLRALHPENPNLFESFSMTRCLLLYLALGYTGLLPFVPIKESFFEIPRPVIVLETFT 206 (264)
T ss_pred HHHhcccc----ceEEEEeCCHHHHHHHHHhCcccccccCchhHHHHHHHhheeccCCCCCCCceEEEeecccEEEEEec
Confidence 99999987 7999999999999999999 99888776542110000 000 0 0000000001100 000
Q ss_pred -----EeCCCCCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 636 -----YLKRGTSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 636 -----~~~~~~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
...+....++++|+.+|++|++|++||||+.
T Consensus 207 ~~~~~~~~~~~~~~~~~v~~~~~~G~~v~vWTVNd~ 242 (264)
T cd08575 207 LGEGASIVAALLWWPNLFDHLRKRGIQVYLWVLNDE 242 (264)
T ss_pred cccccchhhhhhcCHHHHHHHHhcCCcEEEEEECCH
Confidence 0001123467999999999999999999974
No 60
>cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti
Probab=100.00 E-value=9.7e-39 Score=338.88 Aligned_cols=226 Identities=20% Similarity=0.218 Sum_probs=162.0
Q ss_pred ceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCc
Q 005970 407 NLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGI 486 (667)
Q Consensus 407 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~ 486 (667)
+|.||||||+++.+||||++||++|+++|||+||+|||+||||+|||+||.+|+||||.... ++++. ..
T Consensus 1 ~p~IIAHRGas~~aPENTL~AF~~A~~~GaD~IElDV~lTkDGvlVV~HD~tL~RtTn~~g~-v~~~~----------~~ 69 (351)
T cd08608 1 KPAIIGHRGAPMLAPENTLMSFQKALEQKVYGLQADVTISLDGVPFLMHDRTLRRTTNVDRV-FPERQ----------YE 69 (351)
T ss_pred CCeEEEcCCCCCCCCcchHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCccccccCCCCc-ccccc----------cc
Confidence 36899999999999999999999999999999999999999999999999999999993210 11110 01
Q ss_pred ccccCCHHHHcccCCCccC----Cccccc-ccC-C-CCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcc
Q 005970 487 FSFSLIWDEIQTLIPQISN----PYFKFK-LFR-N-PKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGM 559 (667)
Q Consensus 487 ~i~d~t~~EL~~L~~~~~~----p~~~~~-~~~-~-~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~ 559 (667)
.++++||+||++|++|.++ ||+... .++ + ..+. +++||||+|+|+++++.+ ..++||||.+.... ....
T Consensus 70 ~~~~~TlaEL~~LdaG~wf~~~~p~~~~~~~~~~~~~~~~-ge~IPTL~EvL~~~~~~~--~~l~iEIK~~~~~~-~~~~ 145 (351)
T cd08608 70 DASMFNWTDLERLNAGQWFLKDDPFWTAQSLSPSDRKEAG-NQSVCSLAELLELAKRYN--ASVLLNLRRPPPNH-PYHQ 145 (351)
T ss_pred ccccCCHHHHhhCCCCcccccCCccccccccccccccccC-CCCCCCHHHHHHHHHhcC--CeEEEEECCCcccC-cchh
Confidence 2578999999999999764 222111 111 1 1344 489999999999998752 36999999653110 1123
Q ss_pred cHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeC
Q 005970 560 SVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLK 638 (667)
Q Consensus 560 ~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~ 638 (667)
.+++.+++++.++++.. ++++++||+. ++.+|++ |+++++.... .....+ ..+++. .+.+.
T Consensus 146 ~~~~~v~~~i~~~~~~~---~~vi~sSf~~--~~~vr~l~P~~~~~~~~~--------~~~~~~----~~~~~~-~l~~~ 207 (351)
T cd08608 146 SWINLTLKTILASGIPQ---EQVMWTPDWQ--RKLVRKVAPGFQQTSGEK--------LPVASL----RERGIT-RLNLR 207 (351)
T ss_pred HHHHHHHHHHHHhCCCc---CeEEEEcchH--HHHHHHHCCCCeeecccc--------chHHHH----HHcCCe-EEccc
Confidence 67788999999998752 5788899976 4789999 9998753211 011111 122332 22222
Q ss_pred CCCCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 639 RGTSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 639 ~~~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
.. ..++++|+.+|++|++|++||||++
T Consensus 208 ~~-~lt~~~v~~~~~~Gl~V~vWTVN~~ 234 (351)
T cd08608 208 YT-QASAQEIRDYSASNLSVNLYTVNEP 234 (351)
T ss_pred hh-hcCHHHHHHHHHCCCEEEEEecCCH
Confidence 11 2356999999999999999999974
No 61
>cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs.
Probab=100.00 E-value=2.6e-38 Score=330.93 Aligned_cols=232 Identities=15% Similarity=0.133 Sum_probs=166.3
Q ss_pred EEEecCCCC-C----------CCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCcccccc
Q 005970 410 VISKNGASG-D----------YPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIP 478 (667)
Q Consensus 410 iiaHRG~~~-~----------~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~ 478 (667)
||||||+.. . +||||++||++|++.|||+||+|||+||||+|||+||.+|+|+++-.
T Consensus 2 ~ighrg~~~~~~~~~~~~~~~~~ENTl~Af~~A~~~Gad~vE~DV~lTkDg~~VV~HD~~l~r~~~g~------------ 69 (282)
T cd08605 2 VIGHRGLGMNRASHQPSVGPGIRENTIASFIAASKFGADFVEFDVQVTRDGVPVIWHDDFIVVERGGE------------ 69 (282)
T ss_pred eEeccCCCcCcccccccccCCCCCcHHHHHHHHHHcCCCEEEEEEEECcCCeEEEECCCceecccCCC------------
Confidence 799999765 3 45999999999999999999999999999999999999999998810
Q ss_pred ccccCCCcccccCCHHHHcccCCCccCCccc----ccccCCCC---C--CCCccccCHHHHHHHHHhcCCcceEEEEeec
Q 005970 479 EIMAGSGIFSFSLIWDEIQTLIPQISNPYFK----FKLFRNPK---N--KNAGKFMKLSDFLEMAKNANSLSGVLISIEN 549 (667)
Q Consensus 479 ~~~~~~g~~i~d~t~~EL~~L~~~~~~p~~~----~~~~~~~~---~--~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~ 549 (667)
...|. |.++||+||++|+++.++.... ......+. + ..+++||||+|+|+.++.. ++++||||.
T Consensus 70 ---~~~~~-V~dlT~~EL~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPtL~evl~~~~~~---~~l~IEiK~ 142 (282)
T cd08605 70 ---VESSR-IRDLTLAELKALGPQAESTKTSTVALYRKAKDPEPEPWIMDVEDSIPTLEEVFSEVPPS---LGFNIELKF 142 (282)
T ss_pred ---cCccc-hhhCcHHHHHhccccccccccCcchhhccccccccccccccccCCCCCHHHHHHhCCCC---ccEEEEEec
Confidence 01454 9999999999999975431100 00000010 1 1247999999999999654 479999996
Q ss_pred chhhh--hhhcccHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccch---hhhhHHHHHHHH
Q 005970 550 AVYLA--EKQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENI---RDALNQTIEDIK 623 (667)
Q Consensus 550 ~~~~~--~~~~~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~---~~~~~~~l~~~~ 623 (667)
+.... ...-..++++++++++++++. ++++|+|||+++|+.++++ |++++++|++... .+.....+....
T Consensus 143 ~~~~~~~~~~~~~~~~~v~~~i~~~~~~----~~viisSF~~~~l~~l~~~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~ 218 (282)
T cd08605 143 GDDNKTEAEELVRELRAILAVCKQHAPG----RRIMFSSFDPDAAVLLRALQSLYPVMFLTDCGPYTHNDPRRNSIEAAI 218 (282)
T ss_pred CccccchHHHHHHHHHHHHHHHHhcCCC----CeEEEEeCCHHHHHHHHhcCccCCEEEEecCCCccccCchhhhHHHHH
Confidence 53210 000012457889999999886 7999999999999999999 9999999986421 111111222333
Q ss_pred HhhhhcCCCeeEEeCCC-CCccHHHHHHHHHcCCcEEEEec--cC
Q 005970 624 KFADSVVLTMSLYLKRG-TSSQTQLWRSTHITRELVLMELL--QN 665 (667)
Q Consensus 624 ~~a~~i~~~~~i~~~~~-~~~~~~~v~~ah~~Gl~V~vWTV--n~ 665 (667)
.++..+++. .+.+... +..++++|+++|++|+.|++||| |+
T Consensus 219 ~~~~~~~~~-~~~~~~~~l~~~~~~v~~~~~~Gl~v~vWTv~~n~ 262 (282)
T cd08605 219 QVALEGGLQ-GIVSEVKVLLRNPTAVSLVKASGLELGTYGKLNND 262 (282)
T ss_pred HHHHHcCCc-eEEecHHHhhcCcHHHHHHHHcCcEEEEeCCCCCC
Confidence 344444553 2222212 22467999999999999999999 86
No 62
>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp
Probab=100.00 E-value=3.4e-38 Score=330.75 Aligned_cols=230 Identities=14% Similarity=0.139 Sum_probs=167.3
Q ss_pred eeEEEecCCCCCCC--------chhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccc
Q 005970 408 LLVISKNGASGDYP--------SCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPE 479 (667)
Q Consensus 408 ~~iiaHRG~~~~~P--------ENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~ 479 (667)
+.||||||+++.+| |||++||++|+++|||+||+|||+||||++||+||.+|+|+ |
T Consensus 2 ~~iiaHRG~~~~~p~~~~~~~pENTl~af~~A~~~g~d~vE~DV~lTkDg~~VV~HD~~l~rt-~--------------- 65 (286)
T cd08606 2 VQVIGHRGLGKNTAERKSLQLGENTVESFILAASLGASYVEVDVQLTKDLVPVIYHDFLVSET-G--------------- 65 (286)
T ss_pred ceEEEeCCCCCCcccccccCcCcchHHHHHHHHHcCCCEEEEEEEEccCCEEEEeCCCeeccC-C---------------
Confidence 57999999999999 99999999999999999999999999999999999999995 6
Q ss_pred cccCCCcccccCCHHHHcccCCCccCCcccccccCCCCCCCC---ccccCHHHHHHHHHhcCCcceEEEEeecchhhhhh
Q 005970 480 IMAGSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNA---GKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEK 556 (667)
Q Consensus 480 ~~~~~g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~---~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~ 556 (667)
++|. |.++|++||++|+.+...+. +........+.|. ++||||+|+|+.++.. ++++||||.+......
T Consensus 66 ---~~~~-v~~lt~~eL~~ld~~~~~~~-~~~~~~~~~~~g~~~~~~iptL~evl~~~~~~---~~l~IEiK~~~~~~~~ 137 (286)
T cd08606 66 ---TDVP-IHDLTLEQFLHLSRMKYTVD-FKKKGFKGNSRGHSIQAPFTTLEELLKKLPKS---VGFNIELKYPMLHEAE 137 (286)
T ss_pred ---CCCc-cccCCHHHHHhhhccccccc-ccccCCCCcccccccccCCCcHHHHHHhCCCc---cceEEEEecCCcchhh
Confidence 4564 99999999999985421110 0000011111221 4699999999999754 4799999975421100
Q ss_pred ---------hcccHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhh---hhHHHHHHHH
Q 005970 557 ---------QGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRD---ALNQTIEDIK 623 (667)
Q Consensus 557 ---------~~~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~---~~~~~l~~~~ 623 (667)
....+++.++++|+++++. ++++|+|||+++|+.++++ |+++++++++..... ..........
T Consensus 138 ~~~~~~~~~~~~~~~~~v~~~i~~~~~~----~~vi~sSF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~ 213 (286)
T cd08606 138 EEEVAPVAIELNAFVDTVLEKVFDYGAG----RNIIFSSFTPDICILLSLKQPGYPVLFLTEAGKAPDMDVRAASLQEAI 213 (286)
T ss_pred hcccccchhHHHHHHHHHHHHHHhcCCC----CceEEEcCCHHHHHHHHhhCcCCCEEEEeCCCCCccCCchhhcHHHHH
Confidence 0014678999999999886 7999999999999999999 999999998642110 1111122223
Q ss_pred HhhhhcCCCeeEEeCCCCCccHHHHHHHHHcCCcEEEEec--cC
Q 005970 624 KFADSVVLTMSLYLKRGTSSQTQLWRSTHITRELVLMELL--QN 665 (667)
Q Consensus 624 ~~a~~i~~~~~i~~~~~~~~~~~~v~~ah~~Gl~V~vWTV--n~ 665 (667)
.++...+.............++++|+.+|++|+.|++||| |+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Gl~v~~WTv~~n~ 257 (286)
T cd08606 214 RFAKQWNLLGLVSAAEPLVMCPRLIQVVKRSGLVCVSYGVLNND 257 (286)
T ss_pred HHHHHCCCeEEEechHHhhhChHHHHHHHHCCcEEEEECCccCC
Confidence 3444444432111112123457999999999999999999 76
No 63
>cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia
Probab=100.00 E-value=2.2e-38 Score=333.03 Aligned_cols=224 Identities=18% Similarity=0.186 Sum_probs=160.9
Q ss_pred CceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCC
Q 005970 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSG 485 (667)
Q Consensus 406 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g 485 (667)
..+.||||||+++.+||||++||++|+++|||+||+|||+||||++||+||++|+|+||.... ++.+ ..
T Consensus 25 ~~~~IIAHRGas~~aPENTl~AF~~Ai~~GaD~IE~DV~lTkDG~lVV~HD~tL~Rtt~~~g~-~~~~---------~~- 93 (315)
T cd08609 25 PKPALVGHRGAPMLAPENTLMSLRKSLECGVVVFETDVMVSKDGVPFLMHDEGLLRTTNVKDV-FPGR---------DA- 93 (315)
T ss_pred CCCeEEECCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEeCCCcccccCCCCCC-cccc---------cc-
Confidence 357999999999999999999999999999999999999999999999999999999993210 0000 00
Q ss_pred cccccCCHHHHcccCCCccCCcc----cc-cc--cCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhc
Q 005970 486 IFSFSLIWDEIQTLIPQISNPYF----KF-KL--FRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQG 558 (667)
Q Consensus 486 ~~i~d~t~~EL~~L~~~~~~p~~----~~-~~--~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~ 558 (667)
.+|.++||+||++|++|.++... .. .. +....+. +++||||+|+|+.+++.+ ..++||||...... ...
T Consensus 94 ~~V~dlTlaEL~~ld~g~wf~~~~~~~~~~~~~~~~~~~~~-ge~IPTL~EvL~~~~~~~--~~l~IEIK~~~~~~-~~~ 169 (315)
T cd08609 94 AGSNNFTWTELKTLNAGSWFLERRPFWTLSSLSEEDRREAD-NQTVPSLSELLDLAKKHN--VSIMFDLRNENNSH-VFY 169 (315)
T ss_pred ccHhhCCHHHHhhCCCCcccCcccccccccccccccccccC-CCCCCCHHHHHHHHHhcC--CEEEEEeCCCCCCC-ccH
Confidence 13899999999999998754210 00 00 0001234 489999999999998752 36999999753100 011
Q ss_pred ccHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEe
Q 005970 559 MSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYL 637 (667)
Q Consensus 559 ~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~ 637 (667)
..+++.++++++++++.. .+++ +|++..++.++++ |+++++++... . . ....+..+++.
T Consensus 170 ~~f~~~vl~~i~~~~~~~---~~v~--~~~~~~l~~~~~~~P~~~~~~~~~~-------~-~--~~~~~~~i~~~----- 229 (315)
T cd08609 170 SSFVFYTLETILKLGIPP---DKVW--WLPDEYRHDVMKMEPGFKQVYGRQK-------E-M--LMDGGNFMNLP----- 229 (315)
T ss_pred HHHHHHHHHHHHHcCCCc---ceEE--EeCHHHHHHHHHhCcCceeecccch-------h-h--HhcCCeEEecc-----
Confidence 367889999999998752 3444 4578999999999 99998764321 0 0 01112222221
Q ss_pred CCCCCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 638 KRGTSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 638 ~~~~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
. ...++++|+.+|++|++|++||||++
T Consensus 230 -~-~~l~~~~v~~~~~~G~~v~vWTVNd~ 256 (315)
T cd08609 230 -Y-QDLSALEIKELRKDNVSVNLWVVNEP 256 (315)
T ss_pred -c-ccCCHHHHHHHHHCCCEEEEECCCCH
Confidence 1 12356899999999999999999974
No 64
>cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip
Probab=100.00 E-value=1.1e-37 Score=317.54 Aligned_cols=208 Identities=16% Similarity=0.138 Sum_probs=160.2
Q ss_pred EEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCC-Cccc
Q 005970 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGS-GIFS 488 (667)
Q Consensus 410 iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~-g~~i 488 (667)
|+||||+++.+||||++||+.|++.|+|+||+|||+||||++||+||.+++|+|| ++ + .|
T Consensus 1 iiAHRG~~~~~pENT~~af~~a~~~g~d~vE~Dv~lTkDg~~vv~HD~~l~R~t~------------------~~~~-~v 61 (234)
T cd08570 1 VIGHRGYKAKYPENTLLAFEKAVEAGADAIETDVHLTKDGVVVISHDPNLKRCFG------------------KDGL-II 61 (234)
T ss_pred CEeCCCCCCCCCccHHHHHHHHHHhCCCEEEEEeeEccCCcEEEeCCCccceeeC------------------CCCC-Ee
Confidence 6899999999999999999999999999999999999999999999999999999 56 4 49
Q ss_pred ccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhc--CCcceEEEEeecchhhhhhhcccHHHHHH
Q 005970 489 FSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNA--NSLSGVLISIENAVYLAEKQGMSVTNSVM 566 (667)
Q Consensus 489 ~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~--~~~~~l~iEiK~~~~~~~~~~~~~~~~v~ 566 (667)
+++|++||++|+++.. +.++||||+|+|++++.. +. +.++||||..... ..+++.+.
T Consensus 62 ~~~t~~eL~~l~~~~~---------------~~~~iptL~evl~~~~~~~~~~-~~l~iEiK~~~~~-----~~~~~~v~ 120 (234)
T cd08570 62 DDSTWDELSHLRTIEE---------------PHQPMPTLKDVLEWLVEHELPD-VKLMLDIKRDNDP-----EILFKLIA 120 (234)
T ss_pred ccCCHHHHhhcccccC---------------CCccCCcHHHHHHHHHhcCCCC-eEEEEEECCCCCH-----HHHHHHHH
Confidence 9999999999998631 136899999999999764 22 4799999964321 25677888
Q ss_pred HHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHh---hhhcCCCeeEEeCCCCC
Q 005970 567 EALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKF---ADSVVLTMSLYLKRGTS 642 (667)
Q Consensus 567 ~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~---a~~i~~~~~i~~~~~~~ 642 (667)
+++++++......++++|+||+++.|+.+++. |+++++++..... ....+..+ +..+++. +......
T Consensus 121 ~~i~~~~~~~~~~~~v~i~Sf~~~~l~~l~~~~p~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~---~~~~~~~ 191 (234)
T cd08570 121 EMLAVKPDLDFWRERIILGLWHLDFLKYGKEVLPGFPVFHIGFSLD------YARHFLNYSEKLVGISMH---FVSLWGP 191 (234)
T ss_pred HHHHhcCCcccccCCEEEEeCCHHHHHHHHHhCCCCCeEEEEcCHH------HHHHHhccccccceEEee---eehhhcc
Confidence 88888753211116999999999999999999 9999999864311 01111111 1111111 1000001
Q ss_pred ccHHHHHHHHHcCCcEEEEeccCC
Q 005970 643 SQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 643 ~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
.++++++.+|++|++|++||||++
T Consensus 192 ~~~~~v~~~~~~gl~v~~wTvn~~ 215 (234)
T cd08570 192 FGQAFLPELKKNGKKVFVWTVNTE 215 (234)
T ss_pred cCHHHHHHHHHCCCEEEEEecCCH
Confidence 357999999999999999999974
No 65
>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=4e-38 Score=326.48 Aligned_cols=214 Identities=18% Similarity=0.114 Sum_probs=164.4
Q ss_pred CceeEEEecCCCCC--CCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccc--------cccCCCCccCCccc
Q 005970 406 ANLLVISKNGASGD--YPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN--------STNAAQSKFNSITT 475 (667)
Q Consensus 406 ~~~~iiaHRG~~~~--~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r--------~t~v~~~~~~~~~~ 475 (667)
.+|+||||||+++. +||||++||++|++.|||+||+|||+||||++||+||.++++ +++
T Consensus 2 ~~~~iiaHRG~~~~~~~pENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~~~~~~~~~~~~----------- 70 (265)
T cd08564 2 VRPIIVGHRGAGCSTLYPENTLPSFRRALEIGVDGVELDVFLTKDNEIVVFHGTEDDTNPDTSIQLDDS----------- 70 (265)
T ss_pred CCceEEEeCCCCCCCCCCchhHHHHHHHHHcCCCEEEEeeEECCCCCEEEEcCCccccCccccccccCC-----------
Confidence 45899999999988 999999999999999999999999999999999999987665 444
Q ss_pred cccccccCCCcccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhh
Q 005970 476 TIPEIMAGSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAE 555 (667)
Q Consensus 476 ~~~~~~~~~g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~ 555 (667)
+.|. |.++|++||++++++.++.-. ......+. +++||||+|+|+.++.. ++++||||.+.
T Consensus 71 -------~~~~-v~~~t~~el~~l~~~~~~~~~---~~~~~~~~-~~~iptL~evl~~~~~~---~~l~iEiK~~~---- 131 (265)
T cd08564 71 -------GFKN-INDLSLDEITRLHFKQLFDEK---PCGADEIK-GEKIPTLEDVLVTFKDK---LKYNIELKGRE---- 131 (265)
T ss_pred -------Cccc-hhhCcHHHHhhcccCcccccC---cccccccC-CccCCCHHHHHHHhccC---cEEEEEeCCCc----
Confidence 5665 999999999999998754210 00001133 48999999999999874 58999999654
Q ss_pred hhcccHHHHHHHHHHhcCCCCCCCceEEEEeCCH-HHHHHHHhc-cC---CcEEEEeccchhhhhHHHHHHHHHhhhhcC
Q 005970 556 KQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDS-SVLMKLREK-TS---YELVYKVKENIRDALNQTIEDIKKFADSVV 630 (667)
Q Consensus 556 ~~~~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~-~~L~~~~~~-p~---~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~ 630 (667)
..+++.++++|+++++. ++++|+||++ ++|.+++++ |+ ++++++++..... ...+....+...+
T Consensus 132 ---~~~~~~v~~~l~~~~~~----~~v~i~SF~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~ 200 (265)
T cd08564 132 ---VGLGERVLNLVEKYGMI----LQVHFSSFLHYDRLDLLKALRPNKLNVPIALLFNEVKSP----SPLDFLEQAKYYN 200 (265)
T ss_pred ---hhHHHHHHHHHHHcCCC----CCEEEEecCchhHHHHHHHhCcCCCCceEEEEecCCCCc----ccccHHHHHHhcC
Confidence 25789999999999987 7999999999 999999999 98 9999998642100 0011111222223
Q ss_pred CCeeEEeCCCCCccHHHHHHHHHcCCcEEEEe
Q 005970 631 LTMSLYLKRGTSSQTQLWRSTHITRELVLMEL 662 (667)
Q Consensus 631 ~~~~i~~~~~~~~~~~~v~~ah~~Gl~V~vWT 662 (667)
+. .+.+... ..++++|+.+|++|++|++||
T Consensus 201 ~~-~v~~~~~-~~~~~~v~~~~~~Gl~v~~wT 230 (265)
T cd08564 201 AT-WVNFSYD-FWTEEFVKKAHENGLKVMTYF 230 (265)
T ss_pred Cc-eeeechh-hhhHHHHHHHHHcCCEEEEec
Confidence 32 1222111 134689999999999999999
No 66
>cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=9.1e-38 Score=323.63 Aligned_cols=233 Identities=17% Similarity=0.126 Sum_probs=168.3
Q ss_pred eEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCC-ccCCccccccccccCCCcc
Q 005970 409 LVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQS-KFNSITTTIPEIMAGSGIF 487 (667)
Q Consensus 409 ~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~-~~~~~~~~~~~~~~~~g~~ 487 (667)
.||||||+++.+||||++||++|+++|||+||+|||+||||++||+||.+|+|+|+.... .|+ ....+ .
T Consensus 2 ~iiaHRG~~~~~pENT~~Af~~A~~~Gad~vE~DV~~TkDg~~Vv~HD~~l~r~~~r~~~~~~~---------~~~~~-~ 71 (263)
T cd08567 2 DLQGHRGARGLLPENTLPAFAKALDLGVDTLELDLVLTKDGVIVVSHDPKLNPDITRDPDGAWL---------PYEGP-A 71 (263)
T ss_pred ceEeccCCCCCCCcchHHHHHHHHHcCCCEEEEEEEEcCCCCEEEeCCCccCcceeecCCCCcc---------cccCc-c
Confidence 689999999999999999999999999999999999999999999999999987641100 000 00124 4
Q ss_pred cccCCHHHHcccCCCccCCccccc--ccCCCCCCCCccccCHHHHHHHHHhcC-CcceEEEEeecchhhh--hhhcccHH
Q 005970 488 SFSLIWDEIQTLIPQISNPYFKFK--LFRNPKNKNAGKFMKLSDFLEMAKNAN-SLSGVLISIENAVYLA--EKQGMSVT 562 (667)
Q Consensus 488 i~d~t~~EL~~L~~~~~~p~~~~~--~~~~~~~~~~~~iPtL~EvL~~~~~~~-~~~~l~iEiK~~~~~~--~~~~~~~~ 562 (667)
|+++||+||++|+.+.+++....+ .+....+. +++||||+|+|+.++..+ ..++++||+|.+.... ......++
T Consensus 72 v~~~t~~el~~l~~~~~~~~~~~~~~~~~~~~~~-~~~iptL~evl~~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~ 150 (263)
T cd08567 72 LYELTLAEIKQLDVGEKRPGSDYAKLFPEQIPVP-GTRIPTLEEVFALVEKYGNQKVRFNIETKSDPDRDILHPPPEEFV 150 (263)
T ss_pred hhcCCHHHHHhcCCCccccCcCcccCCCccccCc-cccCCCHHHHHHHHHHhccCCceEEEEEcCCCCccccCccHHHHH
Confidence 999999999999988653110000 00011122 278999999999998742 1257999999754310 00123688
Q ss_pred HHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccch-hhhhHHHHHHHHHhhhhcCCCeeEEeCCC
Q 005970 563 NSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENI-RDALNQTIEDIKKFADSVVLTMSLYLKRG 640 (667)
Q Consensus 563 ~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~-~~~~~~~l~~~~~~a~~i~~~~~i~~~~~ 640 (667)
+.++++|+++++. ++++|+||+++.|+.++++ |++++++++.... .. +.. .+...++. .+.+. .
T Consensus 151 ~~v~~~l~~~~~~----~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~-----~~~---~~~~~~~~-~~~~~-~ 216 (263)
T cd08567 151 DAVLAVIRKAGLE----DRVVLQSFDWRTLQEVRRLAPDIPTVALTEETTLGN-----LPR---AAKKLGAD-IWSPY-F 216 (263)
T ss_pred HHHHHHHHHcCCC----CceEEEeCCHHHHHHHHHHCCCccEEEEecCCcccC-----HHH---HHHHhCCc-EEecc-h
Confidence 9999999999987 7999999999999999999 9999999986421 01 111 11222332 12211 1
Q ss_pred CCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 641 TSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 641 ~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
...++++++.+|++|++|++||||+.
T Consensus 217 ~~~~~~~i~~~~~~G~~v~vwtvn~~ 242 (263)
T cd08567 217 TLVTKELVDEAHALGLKVVPWTVNDP 242 (263)
T ss_pred hhcCHHHHHHHHHCCCEEEEecCCCH
Confidence 22456999999999999999999973
No 67
>cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs.
Probab=100.00 E-value=1.2e-37 Score=325.98 Aligned_cols=246 Identities=16% Similarity=0.110 Sum_probs=170.4
Q ss_pred EEEeCCCCC-C----------CCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCccccccccccccccccc
Q 005970 94 VVARGGFSG-I----------FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNY 162 (667)
Q Consensus 94 iiaHRG~~~-~----------~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~ 162 (667)
||||||+.. . +||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|++..
T Consensus 2 ~ighrg~~~~~~~~~~~~~~~~~ENTl~Af~~A~~~Gad--~vE~DV~lTkDg~~VV~HD~~l~r~~~g~~--------- 70 (282)
T cd08605 2 VIGHRGLGMNRASHQPSVGPGIRENTIASFIAASKFGAD--FVEFDVQVTRDGVPVIWHDDFIVVERGGEV--------- 70 (282)
T ss_pred eEeccCCCcCcccccccccCCCCCcHHHHHHHHHHcCCC--EEEEEEEECcCCeEEEECCCceecccCCCc---------
Confidence 799999655 2 469999999999999999 999999999999999999999999988310
Q ss_pred ccCCCCCCccccccCCHHhhccccccccccCCC----------CC----CCCCCCccCCHHHHHHhhCC-CceEEeccCc
Q 005970 163 LVNGVPTPGWFSIDYTLNDLSNIILNQGVYSRT----------DK----FDGNGFQILTVQDMARQIKP-PGLWLNIQHD 227 (667)
Q Consensus 163 ~~~g~~~~g~~v~d~t~~el~~l~~~~~~~~~~----------~~----~~~~~~~iptL~e~l~~~~~-~~~~ieiK~~ 227 (667)
. .+.|.++||+||++|+++.++.... +. +...+++||||+|+|++++. .+++||||.+
T Consensus 71 -~------~~~V~dlT~~EL~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPtL~evl~~~~~~~~l~IEiK~~ 143 (282)
T cd08605 71 -E------SSRIRDLTLAELKALGPQAESTKTSTVALYRKAKDPEPEPWIMDVEDSIPTLEEVFSEVPPSLGFNIELKFG 143 (282)
T ss_pred -C------ccchhhCcHHHHHhccccccccccCcchhhccccccccccccccccCCCCCHHHHHHhCCCCccEEEEEecC
Confidence 0 1379999999999999976542100 00 01014699999999999854 5799999965
Q ss_pred hhhhh---cCCcHHHHHHHHHhhcCC---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHH
Q 005970 228 AFYAQ---HNLSMRSFVLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLT 301 (667)
Q Consensus 228 ~~~~~---~~~~~~~~l~~~l~~~~~---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~ 301 (667)
..... .-..+++.+++++++++. ++|+|||+.+|++++++. | ..++.+ ++............ ..+.....
T Consensus 144 ~~~~~~~~~~~~~~~~v~~~i~~~~~~~~viisSF~~~~l~~l~~~~-p-~~~~~~-L~~~~~~~~~~~~~-~~~~~~~~ 219 (282)
T cd08605 144 DDNKTEAEELVRELRAILAVCKQHAPGRRIMFSSFDPDAAVLLRALQ-S-LYPVMF-LTDCGPYTHNDPRR-NSIEAAIQ 219 (282)
T ss_pred ccccchHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhcC-c-cCCEEE-EecCCCccccCchh-hhHHHHHH
Confidence 32110 001134667888888765 499999999999999986 3 677776 43211100000000 00000011
Q ss_pred HHHh-hcceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEec--cCCCCcccCCCCChHHHHHHHHhCCCcccc
Q 005970 302 FIKT-FASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNF--ANDIPISFNYSYDPLTEYLSFIDNGDFSVD 378 (667)
Q Consensus 302 ~i~~-~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTv--n~~~~~~~~~~~d~~~e~~~li~~G~~gVD 378 (667)
.... .+.++.+.+.. +...+++|+.+|++|++|++||| |+ .++|++++++| ||
T Consensus 220 ~~~~~~~~~~~~~~~~---------l~~~~~~v~~~~~~Gl~v~vWTv~~n~------------~~~~~~l~~~G---Vd 275 (282)
T cd08605 220 VALEGGLQGIVSEVKV---------LLRNPTAVSLVKASGLELGTYGKLNND------------AEAVERQADLG---VD 275 (282)
T ss_pred HHHHcCCceEEecHHH---------hhcCcHHHHHHHHcCcEEEEeCCCCCC------------HHHHHHHHHcC---CC
Confidence 1111 23344443321 11246799999999999999998 64 37899999888 99
Q ss_pred eEecCCC
Q 005970 379 GVLSDFP 385 (667)
Q Consensus 379 GIiTD~P 385 (667)
|||||++
T Consensus 276 gIiTD~~ 282 (282)
T cd08605 276 GVIVDHV 282 (282)
T ss_pred EEEeCCC
Confidence 9999986
No 68
>cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function.
Probab=100.00 E-value=1.4e-37 Score=317.43 Aligned_cols=204 Identities=22% Similarity=0.209 Sum_probs=162.9
Q ss_pred eEEEecCCCCC-CCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcc
Q 005970 409 LVISKNGASGD-YPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIF 487 (667)
Q Consensus 409 ~iiaHRG~~~~-~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~ 487 (667)
+||||||+++. +||||++||++|+++|+|+||+|||+||||++||+||.+|+|+|| ++|.
T Consensus 1 ~iiaHRG~~~~~~pENTl~af~~A~~~g~d~iE~DV~~T~Dg~~vv~HD~~l~r~t~------------------~~~~- 61 (240)
T cd08566 1 LVVAHRGGWGAGAPENSLAAIEAAIDLGADIVEIDVRRTKDGVLVLMHDDTLDRTTN------------------GKGK- 61 (240)
T ss_pred CeEecCCCCCCCCCccHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCCCCccccC------------------CCCc-
Confidence 48999999999 999999999999999999999999999999999999999999999 6775
Q ss_pred cccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHH
Q 005970 488 SFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVME 567 (667)
Q Consensus 488 i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~ 567 (667)
|.++||+||++++++.++ ..+. +++||||+|+|+.+++. +.++||||.. .++.+++
T Consensus 62 v~~~t~~el~~l~~~~~~----------~~~~-~~~iptL~evl~~~~~~---~~l~iEiK~~----------~~~~~~~ 117 (240)
T cd08566 62 VSDLTLAEIRKLRLKDGD----------GEVT-DEKVPTLEEALAWAKGK---ILLNLDLKDA----------DLDEVIA 117 (240)
T ss_pred hhhCcHHHHHhCCcCCCc----------CCCC-CCCCCCHHHHHHhhhcC---cEEEEEECch----------HHHHHHH
Confidence 999999999999998643 2344 38999999999999875 4799999964 2467899
Q ss_pred HHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCCccHH
Q 005970 568 ALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTSSQTQ 646 (667)
Q Consensus 568 ~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~~~~~ 646 (667)
+++++++. ++++|+||++++|+.++++ |++++++++...... ..........+++. .+.+.........
T Consensus 118 ~~~~~~~~----~~v~~~sf~~~~l~~~~~~~p~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 187 (240)
T cd08566 118 LVKKHGAL----DQVIFKSYSEEQAKELRALAPEVMLMPIVRDAEDL-----DEEEARAIDALNLL-AFEITFDDLDLPP 187 (240)
T ss_pred HHHHcCCc----ccEEEEECCHHHHHHHHHhCCCCEEEEEEccCcch-----hHHHHhcccccceE-EEEEeccccccHH
Confidence 99999987 7999999999999999999 999999998642111 00011122222322 2222111102457
Q ss_pred HHHHHHHc-CCcEEEEeccC
Q 005970 647 LWRSTHIT-RELVLMELLQN 665 (667)
Q Consensus 647 ~v~~ah~~-Gl~V~vWTVn~ 665 (667)
.+.++|++ |++|++||||+
T Consensus 188 ~~~~~~~~~Gl~v~~wTvn~ 207 (240)
T cd08566 188 LFDELLRALGIRVWVNTLGD 207 (240)
T ss_pred HHHHHHHhCCCEEEEECCCc
Confidence 88888888 99999999995
No 69
>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.
Probab=100.00 E-value=5.9e-37 Score=316.92 Aligned_cols=258 Identities=12% Similarity=0.127 Sum_probs=180.6
Q ss_pred cccccCCCCCEEEEeCCCCCC----------------------CCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEc
Q 005970 83 RWQTLTGDPPFVVARGGFSGI----------------------FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICF 140 (667)
Q Consensus 83 ~~~~~~~~~~~iiaHRG~~~~----------------------~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~ 140 (667)
.+.......|+||||||++.. |||||++||+.|++.|+| +||+|||+||||++||+
T Consensus 15 ~~~~~~~~~p~iiaHRG~~~~~~~~~v~~~~~t~~~~~~~~~~~pENTl~Af~~A~~~Gad--~IE~DV~lTkDg~lVV~ 92 (309)
T cd08613 15 LLAPPPGGKPKLLAHRGLAQTFDREGVENDTCTAERIDPPTHDYLENTIASMQAAFDAGAD--VVELDVHPTKDGEFAVF 92 (309)
T ss_pred hhccCCCCCceEEeccCCCcccccccccccccccccccCcCCCCCchHHHHHHHHHHcCCC--EEEEEEEEccCCeEEEE
Confidence 334445668999999998664 499999999999999999 99999999999999999
Q ss_pred cCCCCcccccccccccccccccccCCCCCCccccccCCHHhhccccccccccCC-CC--CCCCC-CCccCCHHHHHHhhC
Q 005970 141 PDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWFSIDYTLNDLSNIILNQGVYSR-TD--KFDGN-GFQILTVQDMARQIK 216 (667)
Q Consensus 141 HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~~v~d~t~~el~~l~~~~~~~~~-~~--~~~~~-~~~iptL~e~l~~~~ 216 (667)
||.+|+|+|++. +.|+|+||+||++|+++.++... .. .|.+. ..+||||+|+|++++
T Consensus 93 HD~tL~R~T~g~-------------------g~V~dlTlaEL~~Ld~g~~~~~~~g~~~p~~~~~~~~IPTL~EvL~~~~ 153 (309)
T cd08613 93 HDWTLDCRTDGS-------------------GVTRDHTMAELKTLDIGYGYTADGGKTFPFRGKGVGMMPTLDEVFAAFP 153 (309)
T ss_pred ecCccccccCCC-------------------CchhhCCHHHHhhCCcCcccccccccccccccCCCCCCcCHHHHHHhcC
Confidence 999999999843 27999999999999998876321 11 23321 247999999999998
Q ss_pred CCceEEeccCchhhhhcCCcHHHHHHHHHhhcCCc--eEecCC--HHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcc
Q 005970 217 PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVVN--YISSPE--VNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQT 292 (667)
Q Consensus 217 ~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~~~--~i~SFd--~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 292 (667)
+.+++||||.+. ....+.+.+++++++.. .+.||+ ...|++++++. | +.++. ..... .
T Consensus 154 ~~~l~IEiK~~~------~~~~~~v~~~i~~~~~~r~~v~sf~s~~~~l~~~r~l~-P-~~~~~----s~~~~-----~- 215 (309)
T cd08613 154 DRRFLINFKSDD------AAEGELLAEKLATLPRKRLQVLTVYGGDKPIAALRELT-P-DLRTL----SKASM-----K- 215 (309)
T ss_pred CCcEEEEeCCCC------ccHHHHHHHHHHhcCccceEEEEEECCHHHHHHHHHHC-C-CCcee----cccch-----H-
Confidence 889999999653 12356788888888763 566776 78899999985 2 33332 11100 0
Q ss_pred hhHHhhcHHHHHhhcceecCCC----ccccccCCCCCCCC-ChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHH
Q 005970 293 YGSLLKNLTFIKTFASGILVPK----DYIWPVDESLYLLP-HTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYL 367 (667)
Q Consensus 293 y~~~~~~l~~i~~~a~~i~~~~----~~~~~~~~~~~l~~-~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~ 367 (667)
...+..+.....+..|.. ...+|......+.. +..|++++|+.|.+|++|.-... ..+..+.|+.++|.
T Consensus 216 ----~~~~~~~~~~~~g~~p~~~~~~~~~vP~~~~~~~~~w~~~f~~~~~~~g~~V~~~~~~~~--~~~~~~~d~~~~~~ 289 (309)
T cd08613 216 ----DCLIEYLALGWTGYVPDSCRNTTLLIPLNYAPWLWGWPNRFLARMEAAGTRVILVGPYTG--GEFSEGFDTPEDLK 289 (309)
T ss_pred ----HHHHHHHhhcccccCCccccCCeEecCccccceEEeCCHHHHHHHHHcCCeEEEEecccC--CcccCCCCCHHHHH
Confidence 001111111112233322 12233332222333 67899999999999999931100 00111236679999
Q ss_pred HHHhCCCcccceEecCCCCCc
Q 005970 368 SFIDNGDFSVDGVLSDFPLTP 388 (667)
Q Consensus 368 ~li~~G~~gVDGIiTD~P~~~ 388 (667)
++.+.| +|||+||+|+.+
T Consensus 290 ~l~~~~---~~gi~T~r~~~l 307 (309)
T cd08613 290 RLPEGF---TGYIWTNKIEAL 307 (309)
T ss_pred HHHhhC---CCeEEeCCHhhc
Confidence 999887 999999999865
No 70
>cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=3.8e-37 Score=316.50 Aligned_cols=217 Identities=18% Similarity=0.164 Sum_probs=162.6
Q ss_pred EEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcccc
Q 005970 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIFSF 489 (667)
Q Consensus 410 iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~i~ 489 (667)
||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|| ++|. |.
T Consensus 1 iiaHRG~~~~~pENT~~af~~A~~~g~d~vE~Dv~~TkDg~~Vv~HD~~l~r~t~------------------~~~~-i~ 61 (249)
T cd08561 1 VIAHRGGAGLAPENTLLAFEDAVELGADVLETDVHATKDGVLVVIHDETLDRTTD------------------GTGP-VA 61 (249)
T ss_pred CcccCCCCCCCCccHHHHHHHHHHhCCCEEEEEeeECCCCCEEEECCCccccccC------------------CCCc-hh
Confidence 6899999999999999999999999999999999999999999999999999999 5665 99
Q ss_pred cCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHHHH
Q 005970 490 SLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEAL 569 (667)
Q Consensus 490 d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l 569 (667)
++||+||++|+++.++.... +......+. ++++|||+|+|+.+++ +.++||+|.+. ..+++++++++
T Consensus 62 ~~t~~el~~l~~~~~~~~~~-~~~~~~~~~-~~~iptL~evl~~~~~----~~~~ieiK~~~-------~~~~~~~~~~l 128 (249)
T cd08561 62 DLTLAELRRLDAGYHFTDDG-GRTYPYRGQ-GIRIPTLEELFEAFPD----VRLNIEIKDDG-------PAAAAALADLI 128 (249)
T ss_pred hCCHHHHhhcCcCccccCcc-ccccccCCC-CccCCCHHHHHHhCcC----CcEEEEECCCc-------hhHHHHHHHHH
Confidence 99999999999875431000 000001223 3799999999999865 37999999754 25789999999
Q ss_pred HhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhh--cCCCeeEEeCC---CCCc
Q 005970 570 GNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADS--VVLTMSLYLKR---GTSS 643 (667)
Q Consensus 570 ~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~--i~~~~~i~~~~---~~~~ 643 (667)
+++++. ++++|+||++++|..+++. |+++++++..... .+ ........... .+......+.. ....
T Consensus 129 ~~~~~~----~~~~~~Sf~~~~l~~~~~~~p~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (249)
T cd08561 129 ERYGAQ----DRVLVASFSDRVLRRFRRLCPRVATSAGEGEVA-AF---VLASRLGLGSLYSPPYDALQIPVRYGGVPLV 200 (249)
T ss_pred HHcCCC----CcEEEEECCHHHHHHHHHHCCCcceeccHHHHH-HH---HHHhhcccccccCCCCcEEEcCcccCCeecC
Confidence 999876 7999999999999999999 9999998764310 00 00000000000 01110001111 0134
Q ss_pred cHHHHHHHHHcCCcEEEEeccCC
Q 005970 644 QTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 644 ~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
++++|+.+|++|+.|++||||+.
T Consensus 201 ~~~~v~~~~~~G~~v~vWTVN~~ 223 (249)
T cd08561 201 TPRFVRAAHAAGLEVHVWTVNDP 223 (249)
T ss_pred CHHHHHHHHHCCCEEEEEecCCH
Confidence 57999999999999999999973
No 71
>cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=100.00 E-value=2.4e-36 Score=307.49 Aligned_cols=225 Identities=16% Similarity=0.086 Sum_probs=164.2
Q ss_pred CEEEEeCCCCCC---CCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCC
Q 005970 92 PFVVARGGFSGI---FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVP 168 (667)
Q Consensus 92 ~~iiaHRG~~~~---~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~ 168 (667)
+.+|||||+++. +||||++||+.|++.|+ +||+|||+||||++||+||.+|+|+|++.
T Consensus 4 ~~~iaHRG~~~~~~~~pENTl~af~~A~~~G~---~iE~DV~lT~Dg~lVv~HD~~l~r~t~~~---------------- 64 (237)
T cd08585 4 DRPIAHRGLHDRDAGIPENSLSAFRAAAEAGY---GIELDVQLTADGEVVVFHDDNLKRLTGVE---------------- 64 (237)
T ss_pred CCceECCCCCCCCCCCCccHHHHHHHHHHcCC---cEEEEeeECCCCCEEEeccchHhhhcCCC----------------
Confidence 458999999874 79999999999999995 79999999999999999999999999843
Q ss_pred CCccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCC-CceEEeccCchhhhhcCCcHHHHHHHHHhh
Q 005970 169 TPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSFVLSVSRS 247 (667)
Q Consensus 169 ~~g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~-~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~ 247 (667)
+.|.++||+||++++++. . +++||||+|+|+++++ ..++||+|.+.. ....+++.+.+++++
T Consensus 65 ---~~v~~~t~~eL~~l~~~~---------~--~~~iPtL~evl~~~~~~~~l~iEiK~~~~---~~~~l~~~v~~~l~~ 127 (237)
T cd08585 65 ---GRVEELTAAELRALRLLG---------T--DEHIPTLDEVLELVAGRVPLLIELKSCGG---GDGGLERRVLAALKD 127 (237)
T ss_pred ---CccccCCHHHHhcCCCCC---------C--CCCCCCHHHHHHHhccCceEEEEEccCCc---cchHHHHHHHHHHHh
Confidence 269999999999999863 1 3699999999999864 579999996532 123577888888887
Q ss_pred cCC-ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchh-HHhhcHH-HHHhhcceecCCCccccccCCCC
Q 005970 248 VVV-NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYG-SLLKNLT-FIKTFASGILVPKDYIWPVDESL 324 (667)
Q Consensus 248 ~~~-~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~-~~~~~l~-~i~~~a~~i~~~~~~~~~~~~~~ 324 (667)
++. ++++||++..|+++++.. | +.++.+ +..... ......... .+...+. .....++.+.+.+.
T Consensus 128 ~~~~v~i~SF~~~~l~~l~~~~-p-~~~~~~-l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 194 (237)
T cd08585 128 YKGPAAIMSFDPRVVRWFRKLA-P-GIPRGQ-LSEGSN-DEADPAFWNEALLSALFSNLLTRPDFIAYHLD--------- 194 (237)
T ss_pred cCCCEEEEECCHHHHHHHHHHC-C-CCCEEE-EecCCc-ccccccchhHHHHHhhhhhhccCCCEEEeChh---------
Confidence 753 489999999999999985 3 677775 332110 000000000 0000000 00001222222211
Q ss_pred CCCCChHHHHHHHHc-CCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEec
Q 005970 325 YLLPHTTIVLDAHKE-RLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLS 382 (667)
Q Consensus 325 ~l~~~~~~v~~ah~~-Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiT 382 (667)
..+.++|+.+|++ |++|++||||++ ++|++++++| +++||-
T Consensus 195 --~~~~~~v~~~~~~~G~~v~vWTVnd~------------~~~~~l~~~G---~~~i~~ 236 (237)
T cd08585 195 --DLPNPFVTLARALLGMPVIVWTVRTE------------EDIARLKQYA---DNIIFE 236 (237)
T ss_pred --hCcCHHHHHHHHhcCCcEEEEeCCCH------------HHHHHHHHhC---CeeEeC
Confidence 1146799999999 999999999753 7899999887 999984
No 72
>COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=100.00 E-value=4.9e-36 Score=309.69 Aligned_cols=242 Identities=24% Similarity=0.306 Sum_probs=187.7
Q ss_pred CCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCC
Q 005970 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (667)
Q Consensus 91 ~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~ 170 (667)
.|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|||+..
T Consensus 5 ~~~iiaHRG~s~~~PENTl~Af~~A~~~gad--~iE~Dv~lTkDg~lVv~HD~~~drt~~~~------------------ 64 (257)
T COG0584 5 MPLIIAHRGASGYAPENTLAAFELAAEQGAD--YIELDVQLTKDGVLVVIHDETLDRTTNGL------------------ 64 (257)
T ss_pred ceEEEeccCcCCCCCcchHHHHHHHHHcCCC--EEEeeccCccCCcEEEecccchhhhccCc------------------
Confidence 5899999999999999999999999999999 99999999999999999999999999943
Q ss_pred ccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhC-CCceEEeccCchhhhhcCCcHHHHHHHHHhhcC
Q 005970 171 GWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK-PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVV 249 (667)
Q Consensus 171 g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~-~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~ 249 (667)
..+.++|++|+++++.+.+. ...+ + ..+|+|+|+++.+. +.++++|+|.+........ +...++..+.+..
T Consensus 65 -~~~~~~~~~~~~~~~~~~~~---~~~~-~--~~ip~l~~~l~~~~~~~~l~ieiK~~~~~~~~~~-~~~~~~~~~~~~~ 136 (257)
T COG0584 65 -GTVRDLTLAELKRLDAGSFR---IPTF-G--EEIPTLEELLEATGRKIGLYIEIKSPGFHPQEGK-ILAALLALLKRYG 136 (257)
T ss_pred -cccccCChhhhcCcccCccc---CCCC-C--CccCCHHHHHHHhcccCCeEEEecCCCcccchhh-hHHHHHHHHHHhc
Confidence 25779999999999965542 3344 3 59999999999884 6899999998765433221 3455666655543
Q ss_pred ------CceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHh--hcHHHHHhhcceecCCCccccccC
Q 005970 250 ------VNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLL--KNLTFIKTFASGILVPKDYIWPVD 321 (667)
Q Consensus 250 ------~~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~--~~l~~i~~~a~~i~~~~~~~~~~~ 321 (667)
.++++||+...+.++++..+ ..++++.+ .... . |.++. ..+..+..++.++++.+..+.+.
T Consensus 137 ~~~~~~~v~~~Sf~~~~l~~~~~~~p--~~~~~~l~-~~~~------~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~- 205 (257)
T COG0584 137 GTAADDRVILSSFDHAALKRIKRLAP--DLPLGLLL-DATD------Q-YDWMELPRALKEVALYADGVGPDWAMLAEL- 205 (257)
T ss_pred ccCCCCceEEEecCHHHHHHHHHhCc--CCceEEEE-cccc------h-hhhhhccchhhHHHhhhcccCcccceeccc-
Confidence 34999999999999999863 57777633 2210 0 22221 14666777888888766544321
Q ss_pred CCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhhh
Q 005970 322 ESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVD 393 (667)
Q Consensus 322 ~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~ 393 (667)
.+.++..+|..|+.|++||||++ +.+..+.+.| ||||+||+|+.+.+.+.
T Consensus 206 -------~~~~v~~~~~~gl~v~~~tv~~~------------~~~~~~~~~g---vd~i~td~p~~~~~~~~ 255 (257)
T COG0584 206 -------LTELVDDAHAAGLKVHVWTVNEE------------DDIRLLLEAG---VDGLITDFPDLAVAFLN 255 (257)
T ss_pred -------ccHHHHHHHhCCCeEEEEecCcH------------HHHHHHHHcC---CCEEEcCCHHHHHHhhc
Confidence 35699999999999999999865 3378888777 99999999998877653
No 73
>cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=100.00 E-value=4.4e-36 Score=306.27 Aligned_cols=225 Identities=11% Similarity=0.169 Sum_probs=161.4
Q ss_pred EEEeCCC--CCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCc
Q 005970 94 VVARGGF--SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (667)
Q Consensus 94 iiaHRG~--~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g 171 (667)
+|||||+ ++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|+.+... ...
T Consensus 1 ~~aHRG~G~~~~~pENTl~Af~~A~~~G~d--~iE~DV~lTkDg~lVv~HD~~~~r~~~~g~---------------~~~ 63 (237)
T cd08583 1 LIAHAMGGIDGKTYTNSLDAFEHNYKKGYR--VFEVDLSLTSDGVLVARHSWDESLLKQLGL---------------PTS 63 (237)
T ss_pred CeeecCCCCCCCCCccHHHHHHHHHHhCCC--EEEEEeeEccCCCEEEEECCcCchhhhcCC---------------ccc
Confidence 4899996 788999999999999999999 999999999999999999999988633110 001
Q ss_pred cccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCC---CceEEeccCchhhhhcCCcHHHHHHHHHhhc
Q 005970 172 WFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP---PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV 248 (667)
Q Consensus 172 ~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~---~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~ 248 (667)
..+.++|++||++++.. + +++||||+|+|+++++ ..++||+|.... .....++..+++.++++
T Consensus 64 ~~i~~~t~~el~~~~~~----------~--~~~iptL~evl~~~~~~~~~~l~iEiK~~~~--~~~~~~~~~l~~~~~~~ 129 (237)
T cd08583 64 KNTKPLSYEEFKSKKIY----------G--KYTPMDFKDVIDLLKKYPDVYIVTDTKQDDD--NDIKKLYEYIVKEAKEV 129 (237)
T ss_pred ccccCCCHHHHhhcccc----------C--CCCCCCHHHHHHHHHhCCCeEEEEEecCCCc--ccHHHHHHHHHHHHHhh
Confidence 25889999999987643 2 3699999999999853 468999995432 11113556788888775
Q ss_pred C--C---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhh-cceecCCCccccccCC
Q 005970 249 V--V---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF-ASGILVPKDYIWPVDE 322 (667)
Q Consensus 249 ~--~---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~~~~~~~ 322 (667)
+ + ++++||++..|+.+++.. | .....+.+..... ...... ...+..+ +..+.+.+..
T Consensus 130 ~~~~~~~v~~~SF~~~~L~~~~~~~-p-~~~~~~~~~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~------ 192 (237)
T cd08583 130 DPDLLDRVIPQIYNEEMYEAIMSIY-P-FKSVIYTLYRQDS------IRLDEI---IAFCYENGIKAVTISKNY------ 192 (237)
T ss_pred cccccceeEEEecCHHHHHHHHHhC-C-CcceeeEeccccc------cchHHH---HHHHHHcCCcEEEechhh------
Confidence 2 3 489999999999999985 3 2233332211100 000000 1111211 3334443321
Q ss_pred CCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCC
Q 005970 323 SLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPL 386 (667)
Q Consensus 323 ~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~ 386 (667)
.++.+++.+|++|++|++||||++ .+|++++++| |||||||+|.
T Consensus 193 -----~~~~~v~~~~~~Gl~v~vwTVn~~------------~~~~~l~~~G---VdgiiTD~~~ 236 (237)
T cd08583 193 -----VNDKLIEKLNKAGIYVYVYTINDL------------KDAQEYKKLG---VYGIYTDFLT 236 (237)
T ss_pred -----cCHHHHHHHHHCCCEEEEEeCCCH------------HHHHHHHHcC---CCEEEeCCCC
Confidence 147899999999999999999753 7899999888 9999999985
No 74
>cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=100.00 E-value=2.1e-35 Score=301.24 Aligned_cols=211 Identities=9% Similarity=0.090 Sum_probs=155.9
Q ss_pred EEEecCC--CCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcc
Q 005970 410 VISKNGA--SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIF 487 (667)
Q Consensus 410 iiaHRG~--~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~ 487 (667)
+|||||+ ++.+||||++||++|++.|||+||+|||+||||++||+||.+++|+.+.. ....+.
T Consensus 1 ~~aHRG~G~~~~~pENTl~Af~~A~~~G~d~iE~DV~lTkDg~lVv~HD~~~~r~~~~g--------------~~~~~~- 65 (237)
T cd08583 1 LIAHAMGGIDGKTYTNSLDAFEHNYKKGYRVFEVDLSLTSDGVLVARHSWDESLLKQLG--------------LPTSKN- 65 (237)
T ss_pred CeeecCCCCCCCCCccHHHHHHHHHHhCCCEEEEEeeEccCCCEEEEECCcCchhhhcC--------------Cccccc-
Confidence 4899996 78899999999999999999999999999999999999999998863310 001343
Q ss_pred cccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHH
Q 005970 488 SFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVME 567 (667)
Q Consensus 488 i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~ 567 (667)
+.++|++||++++.. . +++||||+|+|++++..+. +.++||||..... ....++..+++
T Consensus 66 i~~~t~~el~~~~~~----------------~-~~~iptL~evl~~~~~~~~-~~l~iEiK~~~~~---~~~~~~~~l~~ 124 (237)
T cd08583 66 TKPLSYEEFKSKKIY----------------G-KYTPMDFKDVIDLLKKYPD-VYIVTDTKQDDDN---DIKKLYEYIVK 124 (237)
T ss_pred ccCCCHHHHhhcccc----------------C-CCCCCCHHHHHHHHHhCCC-eEEEEEecCCCcc---cHHHHHHHHHH
Confidence 899999999987643 2 3789999999999986422 4789999964321 11246678899
Q ss_pred HHHhc--CCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCCcc
Q 005970 568 ALGNA--GYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTSSQ 644 (667)
Q Consensus 568 ~l~~~--~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~~~ 644 (667)
.++++ ++. +|++|+|||+++|+.++++ |....+++..... ...+.....++..+++. .+.+... ..+
T Consensus 125 ~~~~~~~~~~----~~v~~~SF~~~~L~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~-~~~ 194 (237)
T cd08583 125 EAKEVDPDLL----DRVIPQIYNEEMYEAIMSIYPFKSVIYTLYRQD----SIRLDEIIAFCYENGIK-AVTISKN-YVN 194 (237)
T ss_pred HHHhhccccc----ceeEEEecCHHHHHHHHHhCCCcceeeEecccc----ccchHHHHHHHHHcCCc-EEEechh-hcC
Confidence 99886 355 7999999999999999999 9866666543210 00111222333444443 2222211 235
Q ss_pred HHHHHHHHHcCCcEEEEeccCC
Q 005970 645 TQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 645 ~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
+++|+++|++|++|++||||++
T Consensus 195 ~~~v~~~~~~Gl~v~vwTVn~~ 216 (237)
T cd08583 195 DKLIEKLNKAGIYVYVYTINDL 216 (237)
T ss_pred HHHHHHHHHCCCEEEEEeCCCH
Confidence 7999999999999999999974
No 75
>COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=100.00 E-value=1.5e-34 Score=298.67 Aligned_cols=219 Identities=22% Similarity=0.286 Sum_probs=172.7
Q ss_pred ceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCc
Q 005970 407 NLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGI 486 (667)
Q Consensus 407 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~ 486 (667)
.++||||||+++.+||||++||++|+++|+|+||+|||+||||++||+||.+++||++ +.|.
T Consensus 5 ~~~iiaHRG~s~~~PENTl~Af~~A~~~gad~iE~Dv~lTkDg~lVv~HD~~~drt~~------------------~~~~ 66 (257)
T COG0584 5 MPLIIAHRGASGYAPENTLAAFELAAEQGADYIELDVQLTKDGVLVVIHDETLDRTTN------------------GLGT 66 (257)
T ss_pred ceEEEeccCcCCCCCcchHHHHHHHHHcCCCEEEeeccCccCCcEEEecccchhhhcc------------------Cccc
Confidence 5799999999999999999999999999999999999999999999999999999998 6665
Q ss_pred ccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhccc-HHHHH
Q 005970 487 FSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMS-VTNSV 565 (667)
Q Consensus 487 ~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~-~~~~v 565 (667)
+.++|++|+++++.+.+. .+.+ .+.+|||+|+++.+ +. .+++++|||.+..... .. .+..+
T Consensus 67 -~~~~~~~~~~~~~~~~~~---------~~~~--~~~ip~l~~~l~~~-~~--~~~l~ieiK~~~~~~~---~~~~~~~~ 128 (257)
T COG0584 67 -VRDLTLAELKRLDAGSFR---------IPTF--GEEIPTLEELLEAT-GR--KIGLYIEIKSPGFHPQ---EGKILAAL 128 (257)
T ss_pred -cccCChhhhcCcccCccc---------CCCC--CCccCCHHHHHHHh-cc--cCCeEEEecCCCcccc---hhhhHHHH
Confidence 889999999999965432 2334 38999999999999 42 1589999998775321 12 45666
Q ss_pred HHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccch---hhhhHHHHHHHHHhhhhcCCCeeEEeCCCC
Q 005970 566 MEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENI---RDALNQTIEDIKKFADSVVLTMSLYLKRGT 641 (667)
Q Consensus 566 ~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~---~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~ 641 (667)
+..+.+..... ..++++++||++..+..+++. |.+++++++.... ....+..+..+..++..+++.......
T Consensus 129 ~~~~~~~~~~~-~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--- 204 (257)
T COG0584 129 LALLKRYGGTA-ADDRVILSSFDHAALKRIKRLAPDLPLGLLLDATDQYDWMELPRALKEVALYADGVGPDWAMLAE--- 204 (257)
T ss_pred HHHHHHhcccC-CCCceEEEecCHHHHHHHHHhCcCCceEEEEcccchhhhhhccchhhHHHhhhcccCcccceecc---
Confidence 66666664311 126999999999999999999 9999999998641 122234455566777776665222210
Q ss_pred CccHHHHHHHHHcCCcEEEEeccCC
Q 005970 642 SSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 642 ~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
..+..+..+|..|+.|++||||++
T Consensus 205 -~~~~~v~~~~~~gl~v~~~tv~~~ 228 (257)
T COG0584 205 -LLTELVDDAHAAGLKVHVWTVNEE 228 (257)
T ss_pred -cccHHHHHHHhCCCeEEEEecCcH
Confidence 024799999999999999999986
No 76
>PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme.; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B ....
Probab=100.00 E-value=2.2e-34 Score=295.08 Aligned_cols=239 Identities=24% Similarity=0.287 Sum_probs=150.1
Q ss_pred eCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCcccccc
Q 005970 97 RGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWFSID 176 (667)
Q Consensus 97 HRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~~v~d 176 (667)
|||+++.+||||++||+.|++.|++ +||+|||+||||++||+||.+++|+|++.+ .|.+
T Consensus 1 HRG~~~~~pENTl~af~~A~~~G~~--~iE~Dv~lTkDg~~Vv~HD~~l~r~~~~~~-------------------~i~~ 59 (256)
T PF03009_consen 1 HRGASGNAPENTLAAFRAAIELGAD--GIELDVQLTKDGVPVVFHDDTLDRTTGGDG-------------------PISD 59 (256)
T ss_dssp TTTTTTTSSTTSHHHHHHHHHTTSS--EEEEEEEE-TTS-EEE-SSSBSTTTSSTES-------------------BGGG
T ss_pred CCCCCCCChhhHHHHHHHHHHhCCC--eEcccccccCCceeEeccCCeeeeecCCCc-------------------eecc
Confidence 9999999999999999999999999 999999999999999999999999999542 7999
Q ss_pred CCHHhhcccc-ccccc--cCCCCCCCCCCCccCCHHHHHHhhCCCceEE--eccCch-hhhhcCCcHHHHHHHHHhhcC-
Q 005970 177 YTLNDLSNII-LNQGV--YSRTDKFDGNGFQILTVQDMARQIKPPGLWL--NIQHDA-FYAQHNLSMRSFVLSVSRSVV- 249 (667)
Q Consensus 177 ~t~~el~~l~-~~~~~--~~~~~~~~~~~~~iptL~e~l~~~~~~~~~i--eiK~~~-~~~~~~~~~~~~l~~~l~~~~- 249 (667)
+||+||++++ ++.+. ..+...+++ ..+||||+|+|+++...++.+ ++|... ........+...+...+....
T Consensus 60 ~t~~el~~l~~~~~~~~~~~~~~~~~~-~~~i~tl~e~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (256)
T PF03009_consen 60 LTYAELKKLRTLGSKNSPPFRGQRIPG-KQKIPTLEEVLELCAKVKLNLEIKIKSKDEIKDPEFLKIVKDIVESVSDILK 138 (256)
T ss_dssp S-HHHHTTSBESSTTTTCGGTTTTSCT-CB--EBHHHHHHHHHTTTSEEEEEEEECTTSHHHHHHHHHHHHHHHHHHCHH
T ss_pred CCHHHHhhCcccccCCcccccccceec-ccccCcHHHHHHhhhhccceeEEEEeecccccchhhcccccccccccccccc
Confidence 9999999999 43321 223333443 358999999999965555444 444211 111000023333333333332
Q ss_pred --------CceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhH--HhhcHHHHHhhcceecCCCccccc
Q 005970 250 --------VNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGS--LLKNLTFIKTFASGILVPKDYIWP 319 (667)
Q Consensus 250 --------~~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~--~~~~l~~i~~~a~~i~~~~~~~~~ 319 (667)
.++++||++..|..+++..+ ..++.+.... .. ..+.+ .......+. ...+........
T Consensus 139 ~~~~~~~~~i~~~sf~~~~l~~l~~~~~--~~~~~~l~~~-~~------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~- 206 (256)
T PF03009_consen 139 NSKQALSRRIIISSFDPEALKQLKQRAP--RYPVGFLFEQ-DD------EAPADISLFELYKFVK--CPGFLASVWNYA- 206 (256)
T ss_dssp HHHHHHCTSEEEEESCHHHHHHHHHHCT--TSEEEEEESS-CH------HHHHH-CCHHHHHHHT--TTEEEEEHGGGG-
T ss_pred ccccccccccccccCcHHHHHHHHhcCC--CceEEEEecc-Cc------cccccchhhHHHHhhc--cccccccccccc-
Confidence 34899999999999999862 4677653321 11 01111 000111111 111111100000
Q ss_pred cCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCC
Q 005970 320 VDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLT 387 (667)
Q Consensus 320 ~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~ 387 (667)
. ...++++++.+|++|+.|++||||++ ...+++.++++| |||||||+|++
T Consensus 207 ----~-~~~~~~~v~~~~~~g~~v~~wtvn~~----------~~~~~~~l~~~g---vdgIiTD~P~~ 256 (256)
T PF03009_consen 207 ----D-RLGNPRLVQEAHKAGLKVYVWTVNDP----------DVEDMKRLLDLG---VDGIITDFPDT 256 (256)
T ss_dssp ----H-HCEBHHHHHHHHHTT-EEEEBSB-SH----------SHHHHHHHHHHT----SEEEES-HHH
T ss_pred ----c-ccccHHHHHHHHHCCCEEEEEecCCc----------HHHHHHHHHhCC---CCEEEEcCCCC
Confidence 0 00135699999999999999999753 137899999888 99999999963
No 77
>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.
Probab=100.00 E-value=9.2e-34 Score=293.21 Aligned_cols=216 Identities=15% Similarity=0.128 Sum_probs=159.0
Q ss_pred ccCCceeEEEecCCCCC----------------------CCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCccc
Q 005970 403 SKSANLLVISKNGASGD----------------------YPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (667)
Q Consensus 403 ~~~~~~~iiaHRG~~~~----------------------~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~ 460 (667)
.....|+||||||++.. +||||++||++|++.|+|+||||||+||||++||+||.+|+
T Consensus 19 ~~~~~p~iiaHRG~~~~~~~~~v~~~~~t~~~~~~~~~~~pENTl~Af~~A~~~Gad~IE~DV~lTkDg~lVV~HD~tL~ 98 (309)
T cd08613 19 PPGGKPKLLAHRGLAQTFDREGVENDTCTAERIDPPTHDYLENTIASMQAAFDAGADVVELDVHPTKDGEFAVFHDWTLD 98 (309)
T ss_pred CCCCCceEEeccCCCcccccccccccccccccccCcCCCCCchHHHHHHHHHHcCCCEEEEEEEEccCCeEEEEecCccc
Confidence 44567899999998765 49999999999999999999999999999999999999999
Q ss_pred ccccCCCCccCCccccccccccCCCcccccCCHHHHcccCCCccCCcccccccCCCCCCC--CccccCHHHHHHHHHhcC
Q 005970 461 NSTNAAQSKFNSITTTIPEIMAGSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKN--AGKFMKLSDFLEMAKNAN 538 (667)
Q Consensus 461 r~t~v~~~~~~~~~~~~~~~~~~~g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~--~~~iPtL~EvL~~~~~~~ 538 (667)
|+|| ++|. |.++|++||++|+++.+++... .....|.+ ..+||||+|+|+.++..
T Consensus 99 R~T~------------------g~g~-V~dlTlaEL~~Ld~g~~~~~~~---g~~~p~~~~~~~~IPTL~EvL~~~~~~- 155 (309)
T cd08613 99 CRTD------------------GSGV-TRDHTMAELKTLDIGYGYTADG---GKTFPFRGKGVGMMPTLDEVFAAFPDR- 155 (309)
T ss_pred cccC------------------CCCc-hhhCCHHHHhhCCcCccccccc---ccccccccCCCCCCcCHHHHHHhcCCC-
Confidence 9999 7776 9999999999999986542100 00111222 24799999999999763
Q ss_pred CcceEEEEeecchhhhhhhcccHHHHHHHHHHhcCCCCCCCceEEEEeCC--HHHHHHHHhc-cCCcEEEEeccchhhhh
Q 005970 539 SLSGVLISIENAVYLAEKQGMSVTNSVMEALGNAGYNKQTALKVMIQSTD--SSVLMKLREK-TSYELVYKVKENIRDAL 615 (667)
Q Consensus 539 ~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd--~~~L~~~~~~-p~~~~~~L~~~~~~~~~ 615 (667)
.++||||.+.. ...+.++++|+++++. ++.+.||+ ++.|++++++ |++++.---...
T Consensus 156 ---~l~IEiK~~~~-------~~~~~v~~~i~~~~~~-----r~~v~sf~s~~~~l~~~r~l~P~~~~~s~~~~~----- 215 (309)
T cd08613 156 ---RFLINFKSDDA-------AEGELLAEKLATLPRK-----RLQVLTVYGGDKPIAALRELTPDLRTLSKASMK----- 215 (309)
T ss_pred ---cEEEEeCCCCc-------cHHHHHHHHHHhcCcc-----ceEEEEEECCHHHHHHHHHHCCCCceecccchH-----
Confidence 69999997642 3467899999998774 67778887 8889999999 999775221110
Q ss_pred HHHHHHHHHhhh----hcCCC-----eeEEeCCC---CCc-cHHHHHHHHHcCCcEEEE----------eccC
Q 005970 616 NQTIEDIKKFAD----SVVLT-----MSLYLKRG---TSS-QTQLWRSTHITRELVLME----------LLQN 665 (667)
Q Consensus 616 ~~~l~~~~~~a~----~i~~~-----~~i~~~~~---~~~-~~~~v~~ah~~Gl~V~vW----------TVn~ 665 (667)
.....|+. +.-+. ....|.+. +-. +..+++++|++|.+|++| |||+
T Consensus 216 ----~~~~~~~~~~~~g~~p~~~~~~~~~vP~~~~~~~~~w~~~f~~~~~~~g~~V~~~~~~~~~~~~~~~d~ 284 (309)
T cd08613 216 ----DCLIEYLALGWTGYVPDSCRNTTLLIPLNYAPWLWGWPNRFLARMEAAGTRVILVGPYTGGEFSEGFDT 284 (309)
T ss_pred ----HHHHHHHhhcccccCCccccCCeEecCccccceEEeCCHHHHHHHHHcCCeEEEEecccCCcccCCCCC
Confidence 00111111 00010 11122221 112 568999999999999999 8887
No 78
>PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme.; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B ....
Probab=100.00 E-value=3.4e-33 Score=286.26 Aligned_cols=220 Identities=21% Similarity=0.312 Sum_probs=145.3
Q ss_pred ecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcccccCC
Q 005970 413 KNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIFSFSLI 492 (667)
Q Consensus 413 HRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~i~d~t 492 (667)
|||+++.+||||++||++|++.|+|+||+|||+||||+|||+||.+|.|+++ +.+. |.++|
T Consensus 1 HRG~~~~~pENTl~af~~A~~~G~~~iE~Dv~lTkDg~~Vv~HD~~l~r~~~------------------~~~~-i~~~t 61 (256)
T PF03009_consen 1 HRGASGNAPENTLAAFRAAIELGADGIELDVQLTKDGVPVVFHDDTLDRTTG------------------GDGP-ISDLT 61 (256)
T ss_dssp TTTTTTTSSTTSHHHHHHHHHTTSSEEEEEEEE-TTS-EEE-SSSBSTTTSS------------------TESB-GGGS-
T ss_pred CCCCCCCChhhHHHHHHHHHHhCCCeEcccccccCCceeEeccCCeeeeecC------------------CCce-eccCC
Confidence 9999999999999999999999999999999999999999999999999999 4554 99999
Q ss_pred HHHHcccC-CCcc--CCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHHHH
Q 005970 493 WDEIQTLI-PQIS--NPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEAL 569 (667)
Q Consensus 493 ~~EL~~L~-~~~~--~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l 569 (667)
|+||++++ .+.. .|+ ++..+.+..+||||+|+|+.+.... ..+.+++|............+.+.++..+
T Consensus 62 ~~el~~l~~~~~~~~~~~------~~~~~~~~~~i~tl~e~l~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 133 (256)
T PF03009_consen 62 YAELKKLRTLGSKNSPPF------RGQRIPGKQKIPTLEEVLELCAKVK--LNLEIKIKSKDEIKDPEFLKIVKDIVESV 133 (256)
T ss_dssp HHHHTTSBESSTTTTCGG------TTTTSCTCB--EBHHHHHHHHHTTT--SEEEEEEEECTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCcccccCCcccc------cccceecccccCcHHHHHHhhhhcc--ceeEEEEeecccccchhhccccccccccc
Confidence 99999999 4332 121 2333333468999999999955542 25666666433211000002444555555
Q ss_pred HhcC------CCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCC
Q 005970 570 GNAG------YNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTS 642 (667)
Q Consensus 570 ~~~~------~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~ 642 (667)
.... .. .+++++||+++.|..+++. |.+++++++.................++ .............
T Consensus 134 ~~~~~~~~~~~~----~~i~~~sf~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 206 (256)
T PF03009_consen 134 SDILKNSKQALS----RRIIISSFDPEALKQLKQRAPRYPVGFLFEQDDEAPADISLFELYKFV---KCPGFLASVWNYA 206 (256)
T ss_dssp HHCHHHHHHHHC----TSEEEEESCHHHHHHHHHHCTTSEEEEEESSCHHHHHH-CCHHHHHHH---TTTEEEEEHGGGG
T ss_pred cccccccccccc----cccccccCcHHHHHHHHhcCCCceEEEEeccCccccccchhhHHHHhh---ccccccccccccc
Confidence 5543 23 6899999999999999999 9999999987421110000001112222 2221111111111
Q ss_pred ---ccHHHHHHHHHcCCcEEEEeccCC
Q 005970 643 ---SQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 643 ---~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
.++++|+.+|++|+.|++||||++
T Consensus 207 ~~~~~~~~v~~~~~~g~~v~~wtvn~~ 233 (256)
T PF03009_consen 207 DRLGNPRLVQEAHKAGLKVYVWTVNDP 233 (256)
T ss_dssp HHCEBHHHHHHHHHTT-EEEEBSB-SH
T ss_pred cccccHHHHHHHHHCCCEEEEEecCCc
Confidence 135799999999999999999985
No 79
>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins. The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho
Probab=99.97 E-value=1.3e-30 Score=255.91 Aligned_cols=185 Identities=22% Similarity=0.196 Sum_probs=144.0
Q ss_pred EEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCccc
Q 005970 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (667)
Q Consensus 94 iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~~ 173 (667)
||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||
T Consensus 1 i~aHRG~~~~~pent~~a~~~a~~~g~~--~iE~Dv~~tkDg~~vv~Hd------------------------------- 47 (189)
T cd08556 1 IIAHRGASGEAPENTLAAFRKALEAGAD--GVELDVQLTKDGVLVVIHD------------------------------- 47 (189)
T ss_pred CEeCCCCCCCCCchHHHHHHHHHHcCCC--EEEEEeeEcCCCCEEEEcC-------------------------------
Confidence 5899999999999999999999999999 9999999999999999999
Q ss_pred cccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhC-CCceEEeccCchhhhhcCCcHHHHHHHHHhhcCC--
Q 005970 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK-PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV-- 250 (667)
Q Consensus 174 v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~-~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~~-- 250 (667)
+|||+|+|++++ +..+++|+|.+.. ...+++.+++++++++.
T Consensus 48 -------------------------------i~tL~e~l~~~~~~~~i~leiK~~~~----~~~~~~~l~~~i~~~~~~~ 92 (189)
T cd08556 48 -------------------------------IPTLEEVLELVKGGVGLNIELKEPTR----YPGLEAKVAELLREYGLEE 92 (189)
T ss_pred -------------------------------CCCHHHHHHhcccCcEEEEEECCCCC----chhHHHHHHHHHHHcCCcC
Confidence 469999999997 4789999997532 23567889999999864
Q ss_pred -ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecCCCccccccCCCCCCCCC
Q 005970 251 -NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPH 329 (667)
Q Consensus 251 -~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~~~~~~~~~~l~~~ 329 (667)
++++||++..+.++++.. | +.++.+.. .... . .+... .......+.++.+.+.. ..
T Consensus 93 ~v~i~s~~~~~l~~~~~~~-p-~~~~~~~~-~~~~-~-----~~~~~---~~~~~~~~~~v~~~~~~-----------~~ 149 (189)
T cd08556 93 RVVVSSFDHEALRALKELD-P-EVPTGLLV-DKPP-L-----DPLLA---ELARALGADAVNPHYKL-----------LT 149 (189)
T ss_pred CEEEEeCCHHHHHHHHHhC-C-CCcEEEEe-ecCc-c-----cchhh---hHHHhcCCeEEccChhh-----------CC
Confidence 499999999999999986 3 56766533 2111 0 00000 00111124444443322 24
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCC
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDF 384 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~ 384 (667)
+.+++.+|++|++|++||+|+ .++++.++++| ||||+||+
T Consensus 150 ~~~i~~~~~~g~~v~~wtvn~------------~~~~~~~~~~G---VdgI~TD~ 189 (189)
T cd08556 150 PELVRAAHAAGLKVYVWTVND------------PEDARRLLALG---VDGIITDD 189 (189)
T ss_pred HHHHHHHHHcCCEEEEEcCCC------------HHHHHHHHHCC---CCEEecCC
Confidence 679999999999999999975 37899999887 99999996
No 80
>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins. The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho
Probab=99.97 E-value=7.4e-30 Score=250.62 Aligned_cols=170 Identities=25% Similarity=0.317 Sum_probs=136.7
Q ss_pred EEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcccc
Q 005970 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIFSF 489 (667)
Q Consensus 410 iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~i~ 489 (667)
||||||+++.+||||++||++|++.|||+||+|||+||||++||+||
T Consensus 1 i~aHRG~~~~~pent~~a~~~a~~~g~~~iE~Dv~~tkDg~~vv~Hd--------------------------------- 47 (189)
T cd08556 1 IIAHRGASGEAPENTLAAFRKALEAGADGVELDVQLTKDGVLVVIHD--------------------------------- 47 (189)
T ss_pred CEeCCCCCCCCCchHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEEcC---------------------------------
Confidence 58999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHHHH
Q 005970 490 SLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEAL 569 (667)
Q Consensus 490 d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l 569 (667)
+|||+|+|+.+++. +.+++|+|.+.. ...+++.+++++
T Consensus 48 ----------------------------------i~tL~e~l~~~~~~---~~i~leiK~~~~-----~~~~~~~l~~~i 85 (189)
T cd08556 48 ----------------------------------IPTLEEVLELVKGG---VGLNIELKEPTR-----YPGLEAKVAELL 85 (189)
T ss_pred ----------------------------------CCCHHHHHHhcccC---cEEEEEECCCCC-----chhHHHHHHHHH
Confidence 28999999999873 479999998653 136789999999
Q ss_pred HhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCCccHHHH
Q 005970 570 GNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTSSQTQLW 648 (667)
Q Consensus 570 ~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~~~~~~v 648 (667)
+++++. ++++|+||+++.+.++++. |++++++++........ .. ..+...++. .+.+ ......++++
T Consensus 86 ~~~~~~----~~v~i~s~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~---~~---~~~~~~~~~-~v~~-~~~~~~~~~i 153 (189)
T cd08556 86 REYGLE----ERVVVSSFDHEALRALKELDPEVPTGLLVDKPPLDPL---LA---ELARALGAD-AVNP-HYKLLTPELV 153 (189)
T ss_pred HHcCCc----CCEEEEeCCHHHHHHHHHhCCCCcEEEEeecCcccch---hh---hHHHhcCCe-EEcc-ChhhCCHHHH
Confidence 999876 7999999999999999999 99999999875221110 00 011122322 1111 1112346999
Q ss_pred HHHHHcCCcEEEEeccCC
Q 005970 649 RSTHITRELVLMELLQNS 666 (667)
Q Consensus 649 ~~ah~~Gl~V~vWTVn~e 666 (667)
+.+|++|++|++||||+.
T Consensus 154 ~~~~~~g~~v~~wtvn~~ 171 (189)
T cd08556 154 RAAHAAGLKVYVWTVNDP 171 (189)
T ss_pred HHHHHcCCEEEEEcCCCH
Confidence 999999999999999973
No 81
>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily. The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph
Probab=99.96 E-value=1.5e-29 Score=247.11 Aligned_cols=165 Identities=25% Similarity=0.256 Sum_probs=130.0
Q ss_pred EEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCccc
Q 005970 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (667)
Q Consensus 94 iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~~ 173 (667)
||||||+++.+||||++||+.|++.|++ +||+|||+|+||++|++||.+++|+|.
T Consensus 1 iiaHRG~~~~~peNT~~af~~a~~~G~~--~iE~DV~lt~Dg~lvv~HD~~~~r~~~----------------------- 55 (179)
T cd08555 1 VLSHRGYSQNGQENTLEAFYRALDAGAR--GLELDVRLTKDGELVVYHGPTLDRTTA----------------------- 55 (179)
T ss_pred CEecCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEeEcCCCeEEEECCCccccccC-----------------------
Confidence 5899999999999999999999999999 999999999999999999999999862
Q ss_pred cccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCC--------CceEEeccCchhhhhcCCcHHHHHHHHH
Q 005970 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP--------PGLWLNIQHDAFYAQHNLSMRSFVLSVS 245 (667)
Q Consensus 174 v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~--------~~~~ieiK~~~~~~~~~~~~~~~l~~~l 245 (667)
++++|||+|+|+++++ ..++||+|.+.. ....+.+.+++.+
T Consensus 56 ----------------------------~~~~ptl~evl~~~~~~~~~~~~~~~l~iEiK~~~~---~~~~~~~~~~~~~ 104 (179)
T cd08555 56 ----------------------------GILPPTLEEVLELIADYLKNPDYTIILSLEIKQDSP---EYDEFLAKVLKEL 104 (179)
T ss_pred ----------------------------CCCCCCHHHHHHHHHhhhhcCCCceEEEEEeCCCCC---cchHHHHHHHHHH
Confidence 2489999999999864 568999996532 1235677888888
Q ss_pred hhcC---C---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecCCCccccc
Q 005970 246 RSVV---V---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWP 319 (667)
Q Consensus 246 ~~~~---~---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~~~~ 319 (667)
++++ . ++++|| ....+ . .+ . .. . .
T Consensus 105 ~~~~~~~~~~~v~i~sf---------~~~~~---~-~~------------------------~---~~----~-~----- 134 (179)
T cd08555 105 RVYFDYDLRGKVVLSSF---------NALGV---D-YY------------------------N---FS----S-K----- 134 (179)
T ss_pred HHcCCcccCCCEEEEee---------cccCC---C-hh------------------------c---cc----c-h-----
Confidence 8876 3 388898 10000 0 00 0 00 0 0
Q ss_pred cCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCC
Q 005970 320 VDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDF 384 (667)
Q Consensus 320 ~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~ 384 (667)
....+++|+.+|++|++|++||+|+ ..++|++++++| ||||+||+
T Consensus 135 ------~~~~~~~v~~~~~~g~~v~~wtvn~-----------~~~~~~~l~~~G---vd~i~TD~ 179 (179)
T cd08555 135 ------LIKDTELIASANKLGLLSRIWTVND-----------NNEIINKFLNLG---VDGLITDF 179 (179)
T ss_pred ------hhcCHHHHHHHHHCCCEEEEEeeCC-----------hHHHHHHHHHcC---CCEEeCCC
Confidence 1124679999999999999999974 148899999887 99999996
No 82
>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily. The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph
Probab=99.95 E-value=5.4e-28 Score=236.11 Aligned_cols=151 Identities=19% Similarity=0.110 Sum_probs=119.9
Q ss_pred EEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcccc
Q 005970 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIFSF 489 (667)
Q Consensus 410 iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~i~ 489 (667)
|+||||+++.+||||++||+.|++.||++||+|||+|+||++||+||.+++|++.
T Consensus 1 iiaHRG~~~~~peNT~~af~~a~~~G~~~iE~DV~lt~Dg~lvv~HD~~~~r~~~------------------------- 55 (179)
T cd08555 1 VLSHRGYSQNGQENTLEAFYRALDAGARGLELDVRLTKDGELVVYHGPTLDRTTA------------------------- 55 (179)
T ss_pred CEecCCCCCCCCccHHHHHHHHHHcCCCEEEEEEeEcCCCeEEEECCCccccccC-------------------------
Confidence 5899999999999999999999999999999999999999999999999988652
Q ss_pred cCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcC----CcceEEEEeecchhhhhhhcccHHHHH
Q 005970 490 SLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNAN----SLSGVLISIENAVYLAEKQGMSVTNSV 565 (667)
Q Consensus 490 d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~----~~~~l~iEiK~~~~~~~~~~~~~~~~v 565 (667)
++++|||+|+|+.+++.. ..+.++||+|.+.. ....+++++
T Consensus 56 -------------------------------~~~~ptl~evl~~~~~~~~~~~~~~~l~iEiK~~~~----~~~~~~~~~ 100 (179)
T cd08555 56 -------------------------------GILPPTLEEVLELIADYLKNPDYTIILSLEIKQDSP----EYDEFLAKV 100 (179)
T ss_pred -------------------------------CCCCCCHHHHHHHHHhhhhcCCCceEEEEEeCCCCC----cchHHHHHH
Confidence 257999999999998730 12479999997543 123678899
Q ss_pred HHHHHhcC---CCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCC
Q 005970 566 MEALGNAG---YNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGT 641 (667)
Q Consensus 566 ~~~l~~~~---~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~ 641 (667)
++.+++++ +. ++++++||. .. +.. ..+.. ..
T Consensus 101 ~~~~~~~~~~~~~----~~v~i~sf~--------~~~~~~-------------------------------~~~~~--~~ 135 (179)
T cd08555 101 LKELRVYFDYDLR----GKVVLSSFN--------ALGVDY-------------------------------YNFSS--KL 135 (179)
T ss_pred HHHHHHcCCcccC----CCEEEEeec--------ccCCCh-------------------------------hcccc--hh
Confidence 99999998 54 699999990 00 110 00000 01
Q ss_pred CccHHHHHHHHHcCCcEEEEeccC
Q 005970 642 SSQTQLWRSTHITRELVLMELLQN 665 (667)
Q Consensus 642 ~~~~~~v~~ah~~Gl~V~vWTVn~ 665 (667)
..++++|+++|++|++|++||||+
T Consensus 136 ~~~~~~v~~~~~~g~~v~~wtvn~ 159 (179)
T cd08555 136 IKDTELIASANKLGLLSRIWTVND 159 (179)
T ss_pred hcCHHHHHHHHHCCCEEEEEeeCC
Confidence 124689999999999999999997
No 83
>cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins. This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos
Probab=99.94 E-value=1.2e-25 Score=234.12 Aligned_cols=217 Identities=12% Similarity=0.089 Sum_probs=164.9
Q ss_pred hHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcccccCCHHHHcccCCCc
Q 005970 424 TNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIFSFSLIWDEIQTLIPQI 503 (667)
Q Consensus 424 Tl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~i~d~t~~EL~~L~~~~ 503 (667)
+..+|..|.++|||+||+|||+||||+|||+||.++.|+ + +.+. |.++||+||++++.+.
T Consensus 17 ~~~sfvtAsslgad~VE~DVqLTkDgvpVV~HD~~i~~t-~------------------~~~~-V~dlTleqL~~l~~~~ 76 (300)
T cd08578 17 DGNSFVTASSLSGEYLRVKVCVLKDGTPVVAPEWFVPVG-G------------------IKLL-VSDLTAEQLESILDYS 76 (300)
T ss_pred CchhHHHHHHcCCCEEEEEEEECcCCEEEEECCCceEec-C------------------CcEE-eecCcHHHHhccCCcc
Confidence 467999999999999999999999999999999999775 5 4454 9999999999999875
Q ss_pred cCCc-cccc-ccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhh----------hcccHHHHHHHHHHh
Q 005970 504 SNPY-FKFK-LFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEK----------QGMSVTNSVMEALGN 571 (667)
Q Consensus 504 ~~p~-~~~~-~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~----------~~~~~~~~v~~~l~~ 571 (667)
+... .... ...-..+. +.++|||+|+|+.++.. ++++||||.|...... .-..+++.|++.+-+
T Consensus 77 ~~~~~~~~~~~~~~~~~~-~~~~pTL~evL~~lp~~---iglNIEIK~P~~~e~~~~~~~~~~~~d~N~fvD~IL~~Vf~ 152 (300)
T cd08578 77 LDDLNSEISDMVDLKRLL-SSRVVSLETLLELLPPS---IQLDIQVLFPTAAEIASIPVKGSPLVDLNKFIDTVLLVVFD 152 (300)
T ss_pred cccccccccccchhhhhc-CCcCCCHHHHHHhhccC---CeEEEEECCCChHHhhhccccccchhHHHHHHHHHHHHHHH
Confidence 4211 0000 00001233 37899999999999765 6899999987653210 013578889888887
Q ss_pred cCCC-C---CCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccc--------------------------hhhhhHHHHH
Q 005970 572 AGYN-K---QTALKVMIQSTDSSVLMKLREK-TSYELVYKVKEN--------------------------IRDALNQTIE 620 (667)
Q Consensus 572 ~~~~-~---~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~--------------------------~~~~~~~~l~ 620 (667)
+.-. + ...++|+|+||||++|..++.+ |.+|+.|+++.. +.|.+...++
T Consensus 153 har~~~~~~~~~R~IiFSSf~pdiC~~L~~KQp~yPV~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~Si~ 232 (300)
T cd08578 153 HARYLRHTPGSTRSIVFSSCNPEVCTILNWKQPNFPVFFAMNGLVRNNDTLSFDTPHHLDSLAVDPQKLNEADPRSRSIK 232 (300)
T ss_pred HhhhhcccCCCCCceEEeeCCHHHHHHHHhcCCCCCEEEEecCCccccccccccccccccccccccccccccCchhhhHH
Confidence 6310 0 0126899999999999999999 999999998752 2334456778
Q ss_pred HHHHhhhhcCCCeeEEeCCCCCccHHHHHHHHHcCCcEEEEecc
Q 005970 621 DIKKFADSVVLTMSLYLKRGTSSQTQLWRSTHITRELVLMELLQ 664 (667)
Q Consensus 621 ~~~~~a~~i~~~~~i~~~~~~~~~~~~v~~ah~~Gl~V~vWTVn 664 (667)
++.++|...++.+.+.+...+...+.+|+.++++|+-+++|+-.
T Consensus 233 ~Av~fA~~~nL~Giv~~~~~L~~~P~lV~~ik~~GL~lv~~g~~ 276 (300)
T cd08578 233 EAVRFAKNNNLLGLILPYSLLNIVPQLVESIKSRGLLLIASGEP 276 (300)
T ss_pred HHHHHHHHcCCcEEEecHHHHhhChHHHHHHHHcCCEEEEECCC
Confidence 88889988777666665444666789999999999999999863
No 84
>KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=99.93 E-value=1.2e-26 Score=246.75 Aligned_cols=284 Identities=35% Similarity=0.472 Sum_probs=211.3
Q ss_pred HHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhhhhhhhcCcCcccCCceeEEEe
Q 005970 334 LDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSANLLVISK 413 (667)
Q Consensus 334 ~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~~~~iiaH 413 (667)
..+|..|+.+++|.+.+...+.++|..+...++...+..+...++++..|+|-.....+.++.+.+ ...+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~i~~~ 74 (341)
T KOG2258|consen 2 DDAHIAGLEVFASGFANDFSLAFNYSYALILVTLAFLLNVLFSLLFLFSDPPPTASAHKNLFLHIG-------GWLIIAH 74 (341)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHhhhhhhhHhhhcCCccchhhhHHHhcCCC-------CceeEec
Confidence 356778888888888777667777777776777777777788899999999999888888875422 6899999
Q ss_pred cCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcccccCCH
Q 005970 414 NGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIFSFSLIW 493 (667)
Q Consensus 414 RG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~i~d~t~ 493 (667)
||+++.+||||++||++|++.|||.|||||++|+||++|++||.+..|++++ +.. +.++||
T Consensus 75 rga~g~~penT~~A~~~a~~~Gad~ie~dV~~TsDg~~v~l~d~~~~r~~~v------------------~~~-~~~lt~ 135 (341)
T KOG2258|consen 75 RGASGDAPENTLAAYKKAIADGADLIELDVQMTSDGVPVILHDSTTVRVTGV------------------PEI-VFDLTW 135 (341)
T ss_pred cCCCCCCCcccHHHHHHHHHcCCcEEEeccccCCCCceEEeecCcceeeecc------------------eee-eccCCH
Confidence 9999999999999999999999999999999999999999999999999994 333 899999
Q ss_pred HHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHHHHHhcC
Q 005970 494 DEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEALGNAG 573 (667)
Q Consensus 494 ~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~ 573 (667)
.|++++......++ ..+.+. .+++|+|+|....+-+.+ +.+..|.| + .+.+.+++.+.+.+
T Consensus 136 ~e~~~l~~~~~~~~------~~~~~~-~~~~~~l~e~v~~~~~~n--~~~l~d~~---~-------~~~~~vl~~l~~~~ 196 (341)
T KOG2258|consen 136 MELRKLGPKIENPF------AGPIIT-LEKLLTLAEAVASVVGNN--VAMLNDVK---L-------LVVDKVLEALKNAT 196 (341)
T ss_pred HHHhccCccccCcc------cccccc-hhhhccHHHHHHHHHcCC--hhhhhhhh---h-------hhHHHHHHHHHHHh
Confidence 99999998765432 112222 378999999999998762 23455555 1 45677777777776
Q ss_pred CCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCC-eeEEeCCC---CCccHHHH
Q 005970 574 YNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLT-MSLYLKRG---TSSQTQLW 648 (667)
Q Consensus 574 ~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~-~~i~~~~~---~~~~~~~v 648 (667)
...+..+++++|||++.+|.++++. |.+.++..+... ......++++++..+.++ ..+.+... ....+.++
T Consensus 197 ~~~~~~~kv~v~s~~~~~l~~~~~~~~~~~i~~~~~~~----~ls~~~dik~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 272 (341)
T KOG2258|consen 197 SDFSLYDKVLVQSFNPIVLYRLKKLDPFILIGDTWRFT----FLSGIEDIKKRAFAVVSSKLAIFPVSDSLVLAITKNVV 272 (341)
T ss_pred cCCCccceEEEEecCcHHHHHhccCCceEEecceecch----hhccchhhhcccceeeechHHHHHHHHHHhhhhhccee
Confidence 6544447899999999999999999 885444443321 111223444554444433 22222111 11223678
Q ss_pred HHHHHcCCcEEEEeccCC
Q 005970 649 RSTHITRELVLMELLQNS 666 (667)
Q Consensus 649 ~~ah~~Gl~V~vWTVn~e 666 (667)
...++.++.|++|..|+|
T Consensus 273 ~~~~~~~~~v~~~~~~~e 290 (341)
T KOG2258|consen 273 APLQKLNLVVYVEVFNNE 290 (341)
T ss_pred eehhcCCcEEEEEEeecc
Confidence 888889999999988876
No 85
>KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=99.89 E-value=1.8e-23 Score=222.52 Aligned_cols=274 Identities=20% Similarity=0.257 Sum_probs=194.9
Q ss_pred hhcccCCCcCccccccCCCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccc
Q 005970 72 QVSAQGSNATSRWQTLTGDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNI 151 (667)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~ 151 (667)
..+.+.+....++.+.. ...|++|||+++.+||||++||++|++.|+| .||+||++|+||++|++||.+.+|++++
T Consensus 51 ~~~~~~~~~~~~~~~~~--~~~i~~~rga~g~~penT~~A~~~a~~~Gad--~ie~dV~~TsDg~~v~l~d~~~~r~~~v 126 (341)
T KOG2258|consen 51 DPPPTASAHKNLFLHIG--GWLIIAHRGASGDAPENTLAAYKKAIADGAD--LIELDVQMTSDGVPVILHDSTTVRVTGV 126 (341)
T ss_pred CCccchhhhHHHhcCCC--CceeEeccCCCCCCCcccHHHHHHHHHcCCc--EEEeccccCCCCceEEeecCcceeeecc
Confidence 33444344444444433 6889999999999999999999999999999 9999999999999999999999999986
Q ss_pred cccccccccccccCCCCCCccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCCC--ceEEeccCchh
Q 005970 152 AQIFKTQQKNYLVNGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPP--GLWLNIQHDAF 229 (667)
Q Consensus 152 ~~~~~~~~~~~~~~g~~~~g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~~--~~~ieiK~~~~ 229 (667)
.. .+.++||.|++++..........+.+. ..++|+|+|....+-+. .+.-|.|
T Consensus 127 ~~-------------------~~~~lt~~e~~~l~~~~~~~~~~~~~~--~~~~~~l~e~v~~~~~~n~~~l~d~~---- 181 (341)
T KOG2258|consen 127 PE-------------------IVFDLTWMELRKLGPKIENPFAGPIIT--LEKLLTLAEAVASVVGNNVAMLNDVK---- 181 (341)
T ss_pred ee-------------------eeccCCHHHHhccCccccCcccccccc--hhhhccHHHHHHHHHcCChhhhhhhh----
Confidence 43 489999999999987654322111122 25899999999887543 2223333
Q ss_pred hhhcCCcHHHHHHHHHhhcCC-------ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHH
Q 005970 230 YAQHNLSMRSFVLSVSRSVVV-------NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTF 302 (667)
Q Consensus 230 ~~~~~~~~~~~l~~~l~~~~~-------~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~ 302 (667)
..+.+.+++.+++.+. +++|||++.+|.++++.. + . + +. .+.+.. ......+.
T Consensus 182 -----~~~~~~vl~~l~~~~~~~~~~~kv~v~s~~~~~l~~~~~~~-~-~----~-~i-~~~~~~-------~~ls~~~d 241 (341)
T KOG2258|consen 182 -----LLVVDKVLEALKNATSDFSLYDKVLVQSFNPIVLYRLKKLD-P-F----I-LI-GDTWRF-------TFLSGIED 241 (341)
T ss_pred -----hhhHHHHHHHHHHHhcCCCccceEEEEecCcHHHHHhccCC-c-e----E-Ee-cceecc-------hhhccchh
Confidence 2456667777776543 499999999999999874 1 1 1 11 111111 01112445
Q ss_pred HHhhcceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEec
Q 005970 303 IKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLS 382 (667)
Q Consensus 303 i~~~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiT 382 (667)
+++++.++.+++..+.+......+...+.++...++.++.|+++..+++....+++..++.-++..++. ..|++|.+|
T Consensus 242 ik~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~e~~~~~d~~~~~~~~~~~~~~--~~~~~~~~~ 319 (341)
T KOG2258|consen 242 IKKRAFAVVSSKLAIFPVSDSLVLAITKNVVAPLQKLNLVVYVEVFNNEVVLAVDFSAAPTIELAGWIT--NVGIDGYIT 319 (341)
T ss_pred hhcccceeeechHHHHHHHHHHhhhhhcceeeehhcCCcEEEEEEeeccceeeccccccCceEeeeeec--cccccCcee
Confidence 666777777776666554322222223368999999999999999999866777777777777777776 557999999
Q ss_pred CCCCCchhhhhhhh
Q 005970 383 DFPLTPSAAVDCFA 396 (667)
Q Consensus 383 D~P~~~~~~l~~~~ 396 (667)
++|-.+..+.+..+
T Consensus 320 ~~~~~~~~l~~~~~ 333 (341)
T KOG2258|consen 320 DFHLTAPRLTDNPC 333 (341)
T ss_pred eccchhhHhhcccc
Confidence 99988877776543
No 86
>cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins. This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos
Probab=99.89 E-value=3e-22 Score=208.64 Aligned_cols=231 Identities=13% Similarity=0.076 Sum_probs=155.3
Q ss_pred HHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCccccccCCHHhhccccc
Q 005970 108 SSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWFSIDYTLNDLSNIIL 187 (667)
Q Consensus 108 Tl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~~v~d~t~~el~~l~~ 187 (667)
+..+|-.|.++|+| +||+|||+||||+|||+||.++.|+ ++. ++|.|+||+||++++.
T Consensus 17 ~~~sfvtAsslgad--~VE~DVqLTkDgvpVV~HD~~i~~t-~~~-------------------~~V~dlTleqL~~l~~ 74 (300)
T cd08578 17 DGNSFVTASSLSGE--YLRVKVCVLKDGTPVVAPEWFVPVG-GIK-------------------LLVSDLTAEQLESILD 74 (300)
T ss_pred CchhHHHHHHcCCC--EEEEEEEECcCCEEEEECCCceEec-CCc-------------------EEeecCcHHHHhccCC
Confidence 46699999999999 9999999999999999999999775 421 3799999999999998
Q ss_pred cccccCCC--------CCCCCCCCccCCHHHHHHhhC-CCceEEeccCchhhhhcC-----------CcHHHHHHHHHhh
Q 005970 188 NQGVYSRT--------DKFDGNGFQILTVQDMARQIK-PPGLWLNIQHDAFYAQHN-----------LSMRSFVLSVSRS 247 (667)
Q Consensus 188 ~~~~~~~~--------~~~~~~~~~iptL~e~l~~~~-~~~~~ieiK~~~~~~~~~-----------~~~~~~l~~~l~~ 247 (667)
+.++.... ..+. +.++|||+|+|+.+. ..+++||||.|...+... -.+++.+++.+-+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~--~~~~pTL~evL~~lp~~iglNIEIK~P~~~e~~~~~~~~~~~~d~N~fvD~IL~~Vf~ 152 (300)
T cd08578 75 YSLDDLNSEISDMVDLKRLL--SSRVVSLETLLELLPPSIQLDIQVLFPTAAEIASIPVKGSPLVDLNKFIDTVLLVVFD 152 (300)
T ss_pred cccccccccccccchhhhhc--CCcCCCHHHHHHhhccCCeEEEEECCCChHHhhhccccccchhHHHHHHHHHHHHHHH
Confidence 76542100 1122 358999999999884 478999999987653211 1245556666554
Q ss_pred cC-----------CceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCC-----------------CCCcchhHHhh-
Q 005970 248 VV-----------VNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEP-----------------TTNQTYGSLLK- 298 (667)
Q Consensus 248 ~~-----------~~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~-----------------~~~~~y~~~~~- 298 (667)
+. .++++|||++++..++.++ | ++|+.| ++....-.. .....|.+.+.
T Consensus 153 har~~~~~~~~~R~IiFSSf~pdiC~~L~~KQ-p-~yPV~f-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~ 229 (300)
T cd08578 153 HARYLRHTPGSTRSIVFSSCNPEVCTILNWKQ-P-NFPVFF-AMNGLVRNNDTLSFDTPHHLDSLAVDPQKLNEADPRSR 229 (300)
T ss_pred HhhhhcccCCCCCceEEeeCCHHHHHHHHhcC-C-CCCEEE-EecCCccccccccccccccccccccccccccccCchhh
Confidence 41 2399999999999999886 3 688887 433221100 01113555544
Q ss_pred cHHHHHhhcceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccc
Q 005970 299 NLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVD 378 (667)
Q Consensus 299 ~l~~i~~~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVD 378 (667)
.+++..++|...+. .+.+.+. ..+...+.+|+.++++||.+++|+-.... .+ .... +.|||
T Consensus 230 Si~~Av~fA~~~nL-~Giv~~~---~~L~~~P~lV~~ik~~GL~lv~~g~~~~~-----------~~-~~~~---~~~vn 290 (300)
T cd08578 230 SIKEAVRFAKNNNL-LGLILPY---SLLNIVPQLVESIKSRGLLLIASGEPESL-----------IE-VAEA---GDGIN 290 (300)
T ss_pred hHHHHHHHHHHcCC-cEEEecH---HHHhhChHHHHHHHHcCCEEEEECCCCcc-----------cc-cccc---ccCCc
Confidence 56666666543222 1112111 11334578999999999999999864210 00 1122 34599
Q ss_pred eEecCC
Q 005970 379 GVLSDF 384 (667)
Q Consensus 379 GIiTD~ 384 (667)
|++.|.
T Consensus 291 G~~~~~ 296 (300)
T cd08578 291 GVVTED 296 (300)
T ss_pred eEEeCC
Confidence 999875
No 87
>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=99.83 E-value=2.5e-19 Score=173.05 Aligned_cols=187 Identities=12% Similarity=0.079 Sum_probs=127.2
Q ss_pred EEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCccc
Q 005970 94 VVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWF 173 (667)
Q Consensus 94 iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~~ 173 (667)
|||||| ||++||++|++. | +||+|||+| ||++||+||.+++
T Consensus 1 IiAHRG-------NTl~AF~~A~~~--d--gvE~DVr~t-Dg~lVV~HD~~l~--------------------------- 41 (192)
T cd08584 1 IIAHRG-------NTITALKRTFEN--F--GVETDIRDY-GGQLVISHDPFVK--------------------------- 41 (192)
T ss_pred CCccch-------HHHHHHHHHHHC--C--EEEEEEEee-CCeEEEECCCCCC---------------------------
Confidence 589999 999999999999 8 999999999 9999999998752
Q ss_pred cccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCCCceEEeccCchhhhhcCCcHHHHHHHHHhhcCCc--
Q 005970 174 SIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVVN-- 251 (667)
Q Consensus 174 v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~~~-- 251 (667)
++|||+|+|+++++..+++|||.+ .+++.+.+++++++..
T Consensus 42 ------------------------------~~PtLeEvL~~~~~~~l~inIK~~--------~l~~~l~~li~~~~~~~~ 83 (192)
T cd08584 42 ------------------------------NGELLEDWLKEYNHGTLILNIKAE--------GLELRLKKLLAEYGITNY 83 (192)
T ss_pred ------------------------------CCCCHHHHHHhcccccEEEEECch--------hHHHHHHHHHHhcCCcce
Confidence 468999999999887899999943 3678899999998764
Q ss_pred -eEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecCCCccccccCCCCCCCCCh
Q 005970 252 -YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPHT 330 (667)
Q Consensus 252 -~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~~~~~~~~~~l~~~~ 330 (667)
+++||++..+++++.-. .+..... ++. +.. ..+-.+...+.++..+...-.+ -+.
T Consensus 84 vi~ssf~~~~l~~~~~~~----~~i~tr~-Se~--E~~---------~~~~~~~~~~~~VW~D~f~~~~--------~~~ 139 (192)
T cd08584 84 FFLDMSVPDIIKYLENGE----KRTATRV-SEY--EPI---------PTALSLYEKADWVWIDSFTSLW--------LDN 139 (192)
T ss_pred EEEEcCCHHHHHHHhcCC----CeeEEee-ccc--ccc---------hHHHHhhccccEEEEecccccC--------CCH
Confidence 89999999999997742 1222212 111 110 0111122335555554332221 246
Q ss_pred HHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHH--HhCCCcccceEecCCCCCc
Q 005970 331 TIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSF--IDNGDFSVDGVLSDFPLTP 388 (667)
Q Consensus 331 ~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~l--i~~G~~gVDGIiTD~P~~~ 388 (667)
..++...++|.+|..= -.|. .+-|-.++++.+ ++..+.--++|+||+|+.+
T Consensus 140 ~~~~~~~~~~~~~c~V--SpEL-----h~~~~~~~~~~~~~~~~~~~~~~~~CT~~p~~~ 192 (192)
T cd08584 140 DLILKLLKAGKKICLV--SPEL-----HGRDHLAEWEAKQYIEFLKENFDALCTKVPDLW 192 (192)
T ss_pred HHHHHHHHCCcEEEEE--CHHH-----cCCChHHHHHHHHhhhhccccCeeEeccCcccC
Confidence 7899999999998653 2331 111223344422 2222112579999999863
No 88
>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=99.82 E-value=1.3e-19 Score=175.02 Aligned_cols=152 Identities=10% Similarity=0.068 Sum_probs=111.9
Q ss_pred EEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcccc
Q 005970 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIFSF 489 (667)
Q Consensus 410 iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~i~ 489 (667)
|+|||| ||++||++|++. |+||+|||+| ||++||+||.+++
T Consensus 1 IiAHRG-------NTl~AF~~A~~~--dgvE~DVr~t-Dg~lVV~HD~~l~----------------------------- 41 (192)
T cd08584 1 IIAHRG-------NTITALKRTFEN--FGVETDIRDY-GGQLVISHDPFVK----------------------------- 41 (192)
T ss_pred CCccch-------HHHHHHHHHHHC--CEEEEEEEee-CCeEEEECCCCCC-----------------------------
Confidence 589999 999999999999 9999999999 9999999999763
Q ss_pred cCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHHHH
Q 005970 490 SLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEAL 569 (667)
Q Consensus 490 d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l 569 (667)
++|||+|+|+.++.. .++||||.. .+++++++++
T Consensus 42 ---------------------------------~~PtLeEvL~~~~~~----~l~inIK~~---------~l~~~l~~li 75 (192)
T cd08584 42 ---------------------------------NGELLEDWLKEYNHG----TLILNIKAE---------GLELRLKKLL 75 (192)
T ss_pred ---------------------------------CCCCHHHHHHhcccc----cEEEEECch---------hHHHHHHHHH
Confidence 149999999999754 589999943 4678999999
Q ss_pred HhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCC-eeEEeCCCCCccHHH
Q 005970 570 GNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLT-MSLYLKRGTSSQTQL 647 (667)
Q Consensus 570 ~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~-~~i~~~~~~~~~~~~ 647 (667)
+++++. ++++|+||++.++.+++.- +.+.+.+.-.+ ..+..+. -|...-++| .... ..-.+.+.
T Consensus 76 ~~~~~~----~~vi~ssf~~~~l~~~~~~~~~i~tr~Se~E----~~~~~~~---~~~~~~~VW~D~f~---~~~~~~~~ 141 (192)
T cd08584 76 AEYGIT----NYFFLDMSVPDIIKYLENGEKRTATRVSEYE----PIPTALS---LYEKADWVWIDSFT---SLWLDNDL 141 (192)
T ss_pred HhcCCc----ceEEEEcCCHHHHHHHhcCCCeeEEeecccc----cchHHHH---hhccccEEEEeccc---ccCCCHHH
Confidence 999987 7999999999999999976 54444332111 1112111 111222333 2111 11234578
Q ss_pred HHHHHHcCCcEEE
Q 005970 648 WRSTHITRELVLM 660 (667)
Q Consensus 648 v~~ah~~Gl~V~v 660 (667)
+....++|.+|..
T Consensus 142 ~~~~~~~~~~~c~ 154 (192)
T cd08584 142 ILKLLKAGKKICL 154 (192)
T ss_pred HHHHHHCCcEEEE
Confidence 8888888888764
No 89
>cd08576 GDPD_like_SMaseD_PLD Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase-like domain (GDPD-like) present in sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.4) from spider venom, the Corynebacterium pseudotuberculosis Phospholipase D (PLD)-like protein from pathogenic bacteria, and the Ajellomyces capsulatus H143 PLD-like protein from ascomycetes. Spider SMases D and bacterial PLD proteins catalyze the Mg2+-dependent hydrolysis of sphingomyelin producing choline and ceramide 1-phosphate (C1P), which possess a number of biological functions, such as regulating cell proliferation and apoptosis, participating in inflammatory responses, and playing a key role in phagocytosis. In the presence of Mg2+, SMases D can function as lysophospholipase D and hydrolyze lysophosphatidylcholine (LPC) to choline
Probab=99.17 E-value=3.6e-10 Score=115.03 Aligned_cols=53 Identities=13% Similarity=0.207 Sum_probs=46.2
Q ss_pred CChHHHHHHHHcCC-----eEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhhhhh
Q 005970 328 PHTTIVLDAHKERL-----EVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCF 395 (667)
Q Consensus 328 ~~~~~v~~ah~~Gl-----~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~~~ 395 (667)
...++++.+|++|. +|++||||+ .+++++++++| |||||||+|+.+.++++..
T Consensus 192 ~~~~lv~~~~~rd~~g~i~kV~vWTVn~------------~~~~~~ll~~G---VDGIITD~P~~i~~~l~~~ 249 (265)
T cd08576 192 TCARLREAIKKRDTPGYLGKVYGWTSDK------------GSSVRKLLRLG---VDGIITNYPKRIIDVLKES 249 (265)
T ss_pred ccHHHHHHHHHcCCCCcCCeEEEEeCCC------------HHHHHHHHhcC---CCEEEECCHHHHHHHHHhc
Confidence 35789999999999 999999965 37899999887 9999999999888877654
No 90
>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=99.16 E-value=2e-10 Score=116.02 Aligned_cols=93 Identities=17% Similarity=0.062 Sum_probs=63.6
Q ss_pred HHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCccccccCCHHhhccccccccc
Q 005970 112 YSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPGWFSIDYTLNDLSNIILNQGV 191 (667)
Q Consensus 112 ~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g~~v~d~t~~el~~l~~~~~~ 191 (667)
|..|++.|++ +||.||+++ ||+++|.||..+.|... -+.++++++|.++--...
T Consensus 15 l~~Al~~g~~--svEaDV~l~-dg~l~V~Hd~~~l~~~~----------------------tl~~Lyl~pL~~~l~~~n- 68 (228)
T cd08577 15 LYDALSAGFG--SIEADVWLV-NGDLLVAHDEVDLSPAR----------------------TLESLYLDPLLEILDQNN- 68 (228)
T ss_pred hHHHHHcCCC--EEEEeEEEE-CCEEEEEcChhHcCccC----------------------CHHHHhHHHHHHHHHHcC-
Confidence 6789999999 999999999 99999999999877622 478999999987543321
Q ss_pred cCCCCCCCCCCCccCCHHHHHHhh-CCCceEEeccCchhhhhcCCcHHHHHHHHHhhcCC
Q 005970 192 YSRTDKFDGNGFQILTVQDMARQI-KPPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVV 250 (667)
Q Consensus 192 ~~~~~~~~~~~~~iptL~e~l~~~-~~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~~ 250 (667)
+ ... ... ....++||+|..... ...++..+++.+++.+.
T Consensus 69 --------~---~~~------~~~~~~l~LlIDiKt~g~~---t~~~l~~~L~~~~~~~~ 108 (228)
T cd08577 69 --------G---QAY------NDPEQPLQLLIDIKTDGES---TYPALEEVLKPYIDIGY 108 (228)
T ss_pred --------C---CCC------CCCCCceEEEEEECCCChH---HHHHHHHHHHHHHhcCc
Confidence 1 111 211 235799999954321 12345555666665544
No 91
>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=99.07 E-value=3.9e-10 Score=113.84 Aligned_cols=95 Identities=17% Similarity=0.153 Sum_probs=69.4
Q ss_pred HHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcccccCCHHHHcccCCCccCCc
Q 005970 428 YQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIFSFSLIWDEIQTLIPQISNPY 507 (667)
Q Consensus 428 f~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~i~d~t~~EL~~L~~~~~~p~ 507 (667)
|..|++.||++||+||+++ ||+++|.||..+.+... .+.++++++|.++..+..
T Consensus 15 l~~Al~~g~~svEaDV~l~-dg~l~V~Hd~~~l~~~~----------------------tl~~Lyl~pL~~~l~~~n--- 68 (228)
T cd08577 15 LYDALSAGFGSIEADVWLV-NGDLLVAHDEVDLSPAR----------------------TLESLYLDPLLEILDQNN--- 68 (228)
T ss_pred hHHHHHcCCCEEEEeEEEE-CCEEEEEcChhHcCccC----------------------CHHHHhHHHHHHHHHHcC---
Confidence 7789999999999999999 99999999999987622 388999999998664421
Q ss_pred ccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHHHHHhcCCC
Q 005970 508 FKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEALGNAGYN 575 (667)
Q Consensus 508 ~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~~~ 575 (667)
+. .. ....+...|+||||...... ..++..+++.+++.++.
T Consensus 69 --------~~------~~---------~~~~~~l~LlIDiKt~g~~t----~~~l~~~L~~~~~~~~~ 109 (228)
T cd08577 69 --------GQ------AY---------NDPEQPLQLLIDIKTDGEST----YPALEEVLKPYIDIGYL 109 (228)
T ss_pred --------CC------CC---------CCCCCceEEEEEECCCChHH----HHHHHHHHHHHHhcCce
Confidence 11 11 22112257999999765421 25667777777777765
No 92
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl
Probab=98.20 E-value=1.3e-06 Score=87.24 Aligned_cols=53 Identities=19% Similarity=0.184 Sum_probs=44.8
Q ss_pred eEEEecCC---CCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccc
Q 005970 409 LVISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN 461 (667)
Q Consensus 409 ~iiaHRG~---~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r 461 (667)
+..+|.-+ .-..+|||+.||++|++.||++||+||+-++||+|||+||.++..
T Consensus 13 I~SSHNTYL~g~Ql~~ess~eay~~AL~~GcR~vElDvwdg~dgePvV~HG~tlts 68 (229)
T cd08592 13 IASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPDGMPIIYHGHTLTS 68 (229)
T ss_pred eeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCCCCEEEEeCCcCCC
Confidence 33445442 346899999999999999999999999999999999999988753
No 93
>cd08576 GDPD_like_SMaseD_PLD Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase-like domain (GDPD-like) present in sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.4) from spider venom, the Corynebacterium pseudotuberculosis Phospholipase D (PLD)-like protein from pathogenic bacteria, and the Ajellomyces capsulatus H143 PLD-like protein from ascomycetes. Spider SMases D and bacterial PLD proteins catalyze the Mg2+-dependent hydrolysis of sphingomyelin producing choline and ceramide 1-phosphate (C1P), which possess a number of biological functions, such as regulating cell proliferation and apoptosis, participating in inflammatory responses, and playing a key role in phagocytosis. In the presence of Mg2+, SMases D can function as lysophospholipase D and hydrolyze lysophosphatidylcholine (LPC) to choline
Probab=98.14 E-value=3.3e-05 Score=79.04 Aligned_cols=43 Identities=14% Similarity=0.145 Sum_probs=36.4
Q ss_pred EEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeE-EEeccCcc
Q 005970 410 VISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVP-FCLSFINL 459 (667)
Q Consensus 410 iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~-Vv~HD~~L 459 (667)
+|||| =||+.....|+++||..||+||...++|.+ ..+||--.
T Consensus 2 ~iaHm-------Vn~~~~v~~~l~~GANaiE~Dv~f~~~~~~~~~~Hg~pc 45 (265)
T cd08576 2 AIAHM-------VNDLEGVDDALDHGANAIEIDVTFWSNGTGWWADHDVPC 45 (265)
T ss_pred cchhh-------hccHHHHHHHHHcCCCceeEEEEEccCCcEEEeeCCCcc
Confidence 46776 399999999999999999999999999877 67777543
No 94
>PF13653 GDPD_2: Glycerophosphoryl diester phosphodiesterase family; PDB: 3RLG_A 2F9R_B 1XX1_A 3RLH_A.
Probab=98.09 E-value=1.2e-06 Score=58.65 Aligned_cols=30 Identities=27% Similarity=0.562 Sum_probs=22.4
Q ss_pred eEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCC
Q 005970 342 EVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPL 386 (667)
Q Consensus 342 ~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~ 386 (667)
+|+.||+++ .+.++.++++| ||||+||+|+
T Consensus 1 kV~~WT~d~------------~~~~~~~l~~G---VDgI~Td~p~ 30 (30)
T PF13653_consen 1 KVYFWTPDK------------PASWRELLDLG---VDGIMTDYPD 30 (30)
T ss_dssp EEEEET--S------------HHHHHHHHHHT----SEEEES-HH
T ss_pred CeEEecCCC------------HHHHHHHHHcC---CCEeeCCCCC
Confidence 689999965 47899999888 9999999984
No 95
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=98.06 E-value=3.9e-06 Score=83.49 Aligned_cols=44 Identities=18% Similarity=0.170 Sum_probs=41.1
Q ss_pred CCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccc
Q 005970 418 GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN 461 (667)
Q Consensus 418 ~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r 461 (667)
-..+|||+.||.+|+..||++||+||+-++||+|||+||.++..
T Consensus 25 Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~dgePvV~Hg~tlts 68 (229)
T cd08627 25 QFSSESSLEAYARCLRMGCRCIELDCWDGPDGMPVIYHGHTLTT 68 (229)
T ss_pred ccCCcccHHHHHHHHHhCCCEEEEEeecCCCCCEEEEeCCcCCC
Confidence 45789999999999999999999999999999999999998753
No 96
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl
Probab=97.98 E-value=7.8e-06 Score=81.66 Aligned_cols=51 Identities=18% Similarity=0.066 Sum_probs=43.9
Q ss_pred EEEeCC---CCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCc
Q 005970 94 VVARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLD 146 (667)
Q Consensus 94 iiaHRG---~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~ 146 (667)
-.+|.- |.-.++|||++||..|+..|++ .||+||+-++||+|||+||.++.
T Consensus 14 ~SSHNTYL~g~Ql~~ess~eay~~AL~~GcR--~vElDvwdg~dgePvV~HG~tlt 67 (229)
T cd08592 14 ASSHNTYLTGDQLSSESSLEAYARCLRMGCR--CIELDCWDGPDGMPIIYHGHTLT 67 (229)
T ss_pred eccccccccCCccCCccCHHHHHHHHHhCCC--EEEEEeecCCCCCEEEEeCCcCC
Confidence 345553 2356899999999999999999 99999999999999999998763
No 97
>KOG2421 consensus Predicted starch-binding protein [General function prediction only]
Probab=97.82 E-value=3.2e-06 Score=92.73 Aligned_cols=59 Identities=22% Similarity=0.223 Sum_probs=51.4
Q ss_pred CceeEEEecCCCC-------CCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCccccccc
Q 005970 406 ANLLVISKNGASG-------DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTN 464 (667)
Q Consensus 406 ~~~~iiaHRG~~~-------~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~ 464 (667)
...+.++|||... ..+|||+..+..|++.|+|++|+|||+|+|.++||+||..+...-.
T Consensus 323 ~~~l~~g~rg~g~sy~~~~~~~~ent~~~~~~~~~~~ad~ve~dvqlt~D~~~vvyh~f~~~~~~~ 388 (417)
T KOG2421|consen 323 GLSLNTGHRGNGTSYTVLSQVLRENTIVIVDNVLELGADLVEMDVQLTKDLVPVVYHDFVLLVSVI 388 (417)
T ss_pred chhhhccCCcCCchhhhhhhhhccceeeeehhHHHhhhhHHHhhcccccCCceeeeccceeEEeec
Confidence 3457899999653 3579999999999999999999999999999999999999876543
No 98
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=97.79 E-value=2.5e-05 Score=77.75 Aligned_cols=43 Identities=19% Similarity=0.096 Sum_probs=40.4
Q ss_pred CCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 101 SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 101 ~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
.-..+|||++||..|+..|++ .||+||+-++||+|||+||.++
T Consensus 24 ~Ql~~~ss~e~y~~aL~~GcR--~vElD~wdg~dgePvV~Hg~tl 66 (229)
T cd08627 24 DQFSSESSLEAYARCLRMGCR--CIELDCWDGPDGMPVIYHGHTL 66 (229)
T ss_pred CccCCcccHHHHHHHHHhCCC--EEEEEeecCCCCCEEEEeCCcC
Confidence 346799999999999999999 9999999999999999999887
No 99
>KOG2421 consensus Predicted starch-binding protein [General function prediction only]
Probab=97.64 E-value=6.3e-06 Score=90.41 Aligned_cols=59 Identities=20% Similarity=0.209 Sum_probs=51.5
Q ss_pred CCCEEEEeCCCCC-------CCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCccccc
Q 005970 90 DPPFVVARGGFSG-------IFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASN 150 (667)
Q Consensus 90 ~~~~iiaHRG~~~-------~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~ 150 (667)
...+.++|||... ..+|||+..+..+++.|+| ++|+|||+|+|.++|++||..+...-.
T Consensus 323 ~~~l~~g~rg~g~sy~~~~~~~~ent~~~~~~~~~~~ad--~ve~dvqlt~D~~~vvyh~f~~~~~~~ 388 (417)
T KOG2421|consen 323 GLSLNTGHRGNGTSYTVLSQVLRENTIVIVDNVLELGAD--LVEMDVQLTKDLVPVVYHDFVLLVSVI 388 (417)
T ss_pred chhhhccCCcCCchhhhhhhhhccceeeeehhHHHhhhh--HHHhhcccccCCceeeeccceeEEeec
Confidence 4568899999643 3579999999999999999 999999999999999999998866533
No 100
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein. This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment
Probab=97.40 E-value=0.00013 Score=74.60 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=38.7
Q ss_pred CCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccc
Q 005970 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN 461 (667)
Q Consensus 419 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r 461 (667)
..-+-|+.+|.+|+..||++||+||+-++||+|||+||.++..
T Consensus 26 l~~~ss~~~y~~aL~~GcR~vElD~w~g~~gepvV~Hg~tlts 68 (260)
T cd08597 26 LRGPSSVEGYVRALQRGCRCVELDCWDGPNGEPVIYHGHTLTS 68 (260)
T ss_pred ecCccCHHHHHHHHHhCCCEEEEEeEcCCCCCEEEEeCCcccc
Confidence 3456789999999999999999999999999999999988643
No 101
>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=97.06 E-value=0.00065 Score=63.17 Aligned_cols=43 Identities=14% Similarity=0.176 Sum_probs=39.6
Q ss_pred CCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcc
Q 005970 417 SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINL 459 (667)
Q Consensus 417 ~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L 459 (667)
...+.+|+..+|..+++.|++++|+||+.++||.++|+|+.++
T Consensus 23 ~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~~~~~~v~Hg~~~ 65 (135)
T smart00148 23 KQLWGESSVEGYIQALDHGCRCVELDCWDGPDGEPVIYHGHTF 65 (135)
T ss_pred ccccCcccHHHHHHHHHhCCCEEEEEcccCCCCCEEEEECCcc
Confidence 3567899999999999999999999999999999999999864
No 102
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein. This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment
Probab=96.95 E-value=0.00087 Score=68.59 Aligned_cols=41 Identities=15% Similarity=0.042 Sum_probs=38.0
Q ss_pred CCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 103 IFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 103 ~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
..-+-|+++|..|+..|++ .||+||+-++||.|||+||.++
T Consensus 26 l~~~ss~~~y~~aL~~GcR--~vElD~w~g~~gepvV~Hg~tl 66 (260)
T cd08597 26 LRGPSSVEGYVRALQRGCR--CVELDCWDGPNGEPVIYHGHTL 66 (260)
T ss_pred ecCccCHHHHHHHHHhCCC--EEEEEeEcCCCCCEEEEeCCcc
Confidence 4567799999999999999 9999999999999999999875
No 103
>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=96.60 E-value=0.0027 Score=59.01 Aligned_cols=43 Identities=14% Similarity=0.099 Sum_probs=39.7
Q ss_pred CCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 101 SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 101 ~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
...+.+|+..+|..+++.|+. ++|+||+.++||.++++|+.++
T Consensus 23 ~~~~~~~q~~~i~~qL~~GvR--~~dirv~~~~~~~~~v~Hg~~~ 65 (135)
T smart00148 23 KQLWGESSVEGYIQALDHGCR--CVELDCWDGPDGEPVIYHGHTF 65 (135)
T ss_pred ccccCcccHHHHHHHHHhCCC--EEEEEcccCCCCCEEEEECCcc
Confidence 356789999999999999999 9999999999999999999764
No 104
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=95.66 E-value=0.012 Score=58.91 Aligned_cols=42 Identities=14% Similarity=0.164 Sum_probs=37.5
Q ss_pred CCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCccc
Q 005970 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (667)
Q Consensus 419 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~ 460 (667)
..-+.|..+|.+|+..||..||+|++=-.||+|||+|..++.
T Consensus 26 l~~~ss~e~Y~~aL~~GcRcvElD~wdg~~~ePvV~HG~tlt 67 (227)
T cd08594 26 LLSQSRVDMYARVLQAGCRCVEVDCWDGPDGEPVVHHGYTLT 67 (227)
T ss_pred ccCcccHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCCcc
Confidence 455788899999999999999999999899999999987653
No 105
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=95.38 E-value=0.017 Score=58.72 Aligned_cols=43 Identities=14% Similarity=0.125 Sum_probs=38.4
Q ss_pred CCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccc
Q 005970 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN 461 (667)
Q Consensus 419 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r 461 (667)
..-+-+..+|.+|+..||..||+|++=-.||+|||+|..++..
T Consensus 26 l~~~ss~e~y~~aL~~GcRcvElD~Wdg~~~eP~V~HG~tlts 68 (254)
T cd08633 26 LMSQSRVDMYAWVLQAGCRCVEVDCWDGPDGEPIVHHGYTLTS 68 (254)
T ss_pred cCCccCHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCCccc
Confidence 4567789999999999999999999988899999999988743
No 106
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi
Probab=95.36 E-value=0.025 Score=56.96 Aligned_cols=53 Identities=15% Similarity=0.058 Sum_probs=41.1
Q ss_pred ceeEEEecCC---CCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcc
Q 005970 407 NLLVISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINL 459 (667)
Q Consensus 407 ~~~iiaHRG~---~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L 459 (667)
-.+.-.|.-+ .-..-+-|..+|..|++.||..||+||+=..||+|+|+|..++
T Consensus 11 YfI~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~~ep~V~HG~t~ 66 (228)
T cd08599 11 YFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGRGDICVLHGGTL 66 (228)
T ss_pred hEEeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCCCCeEEEeCCCC
Confidence 3445556432 1234466788999999999999999999888999999998764
No 107
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins. This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki
Probab=95.28 E-value=0.021 Score=57.33 Aligned_cols=41 Identities=20% Similarity=0.167 Sum_probs=37.3
Q ss_pred CCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcc
Q 005970 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINL 459 (667)
Q Consensus 419 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L 459 (667)
..-+-|..+|..|+..||..||+|++=-.||+|||+|..++
T Consensus 26 l~~~Ss~~~y~~aL~~GcRcvElD~wdg~~~eP~v~HG~t~ 66 (226)
T cd08558 26 LTGESSVEAYIRALLRGCRCVELDCWDGPDGEPVVYHGHTL 66 (226)
T ss_pred cCCccCHHHHHHHHHhCCcEEEEEeecCCCCCeEEeeCCCC
Confidence 45678899999999999999999999999999999997764
No 108
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=95.25 E-value=0.016 Score=59.20 Aligned_cols=42 Identities=14% Similarity=0.093 Sum_probs=38.0
Q ss_pred CCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCccc
Q 005970 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (667)
Q Consensus 419 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~ 460 (667)
..-+-+..+|.+|+..||..||+||+=-.||+|||+|..++.
T Consensus 26 l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~tlt 67 (257)
T cd08595 26 LVGPSDLDGYVSALRKGCRCLEIDCWDGADNEPVVYHGYTLT 67 (257)
T ss_pred ccCcccHHHHHHHHHhCCcEEEEEeecCCCCCcEEecCCCcc
Confidence 445788999999999999999999999889999999998774
No 109
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=95.19 E-value=0.018 Score=58.89 Aligned_cols=42 Identities=14% Similarity=0.210 Sum_probs=37.7
Q ss_pred CCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccc
Q 005970 420 YPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN 461 (667)
Q Consensus 420 ~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r 461 (667)
.-+-|..+|.+|+..||..||+|++=-.||+|||+|..++..
T Consensus 27 ~~~ss~e~y~~aL~~GcRcvElD~wdg~~~eP~V~HG~tlts 68 (258)
T cd08631 27 RGQSSVEGYIRALKRGCRCVEVDVWDGPNGEPIVYHGHTFTS 68 (258)
T ss_pred cCccCHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCcccC
Confidence 446699999999999999999999988899999999988743
No 110
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=95.18 E-value=0.021 Score=57.95 Aligned_cols=42 Identities=14% Similarity=0.205 Sum_probs=37.3
Q ss_pred CCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccc
Q 005970 420 YPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN 461 (667)
Q Consensus 420 ~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r 461 (667)
.-+-+..+|.+|+..||..||+|++=-.||+|||+|..++..
T Consensus 27 ~~~ss~e~y~~aL~~GcRcvElD~Wdg~~~eP~V~HG~Tlts 68 (253)
T cd08632 27 LSQSKVDMYARVLQAGCRCVEVDCWDGPDGEPVVHHGYTLTS 68 (253)
T ss_pred cCcccHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCCCcc
Confidence 446688999999999999999999998999999999987643
No 111
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core
Probab=95.13 E-value=0.023 Score=57.93 Aligned_cols=43 Identities=14% Similarity=0.155 Sum_probs=38.2
Q ss_pred CCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccc
Q 005970 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN 461 (667)
Q Consensus 419 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r 461 (667)
..-+-|..+|.+|+..||..||+|++=-.||+|||+|..++..
T Consensus 26 l~~~ss~~~y~~aL~~GcRcvElD~wdG~~~eP~V~HG~tlts 68 (254)
T cd08596 26 LKGESSVELYSQVLLTGCRCVELDCWDGDDGMPIIYHGHTLTT 68 (254)
T ss_pred cCCccCHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCCccc
Confidence 3456789999999999999999999998899999999988743
No 112
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=95.12 E-value=0.019 Score=58.80 Aligned_cols=42 Identities=17% Similarity=0.190 Sum_probs=37.8
Q ss_pred CCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccc
Q 005970 420 YPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN 461 (667)
Q Consensus 420 ~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r 461 (667)
.-+-|..+|.+|+..||..||+|++=-.||+|||+|..++..
T Consensus 27 ~~~ss~~~y~~aL~~GcRcvElD~wdg~~~eP~V~HG~tlts 68 (258)
T cd08630 27 GGPSSTEAYVRAFAQGCRCVELDCWEGPGGEPVIYHGHTLTS 68 (258)
T ss_pred cCcccHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCcccc
Confidence 446789999999999999999999998999999999987654
No 113
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=95.10 E-value=0.021 Score=58.34 Aligned_cols=41 Identities=17% Similarity=0.172 Sum_probs=36.7
Q ss_pred CCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCccc
Q 005970 420 YPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (667)
Q Consensus 420 ~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~ 460 (667)
.-+-|..+|..|+..||..||+|++=-.||+|||+|..++.
T Consensus 27 ~~~ss~~~y~~aL~~GcRcvElD~Wdg~~~eP~V~HG~t~t 67 (254)
T cd08628 27 RSESSTEAYIRCLRMGCRCIELDCWDGPDGKPIIYHGWTRT 67 (254)
T ss_pred ecCCCHHHHHHHHHcCCcEEEEEeecCCCCCeEEeeCCCcc
Confidence 34667899999999999999999998889999999998764
No 114
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=94.89 E-value=0.029 Score=57.31 Aligned_cols=43 Identities=12% Similarity=0.121 Sum_probs=37.9
Q ss_pred CCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccc
Q 005970 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN 461 (667)
Q Consensus 419 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r 461 (667)
..-+-|..+|.+|+..||..||+|++=-.||+|||+|..++..
T Consensus 26 l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~eP~V~HG~tlts 68 (258)
T cd08629 26 LTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTFTS 68 (258)
T ss_pred cCCccCHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCCCcc
Confidence 3456689999999999999999999988899999999987643
No 115
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=94.82 E-value=0.032 Score=56.23 Aligned_cols=42 Identities=19% Similarity=0.202 Sum_probs=37.1
Q ss_pred CCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCccc
Q 005970 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (667)
Q Consensus 419 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~ 460 (667)
..-+-|..+|.+|+..||..||+||+=-.||+|||+|..++.
T Consensus 26 l~~~ss~~~y~~aL~~GcRcvElD~wdg~~~ep~V~HG~t~t 67 (231)
T cd08598 26 LAGDSSVEGYIRALQRGCRCVEIDVWDGDDGEPVVTHGYTLT 67 (231)
T ss_pred cCCccCHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCCCc
Confidence 345678999999999999999999998888999999987664
No 116
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=94.74 E-value=0.032 Score=57.21 Aligned_cols=43 Identities=19% Similarity=0.204 Sum_probs=38.1
Q ss_pred CCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccc
Q 005970 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN 461 (667)
Q Consensus 419 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r 461 (667)
..-+-|..+|.+|+..||..||+|++=-.||+|||+|..++..
T Consensus 26 l~~~ss~~~y~~aL~~GcRcvElD~wdg~~~eP~v~HG~t~t~ 68 (257)
T cd08593 26 LKGPSSTEAYIRALKKGCRCVELDCWDGPDGEPIIYHGHTLTS 68 (257)
T ss_pred ccCCccHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCcccc
Confidence 3556789999999999999999999988899999999987653
No 117
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=94.64 E-value=0.033 Score=56.88 Aligned_cols=43 Identities=14% Similarity=0.060 Sum_probs=36.9
Q ss_pred CCCchhHHHHHHHHHCCCCeEEcceeeec--CCeEEEeccCcccc
Q 005970 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSK--DGVPFCLSFINLIN 461 (667)
Q Consensus 419 ~~PENTl~Af~~A~~~Gad~iE~DV~lTk--Dg~~Vv~HD~~L~r 461 (667)
..-+-+..+|.+|+..||..||+||+=-. ||+|||+|..++..
T Consensus 26 l~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~eP~V~HG~tlts 70 (257)
T cd08626 26 FGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEPIITHGKAMCT 70 (257)
T ss_pred ccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCCcc
Confidence 34567899999999999999999999654 78999999988743
No 118
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=94.42 E-value=0.05 Score=54.58 Aligned_cols=42 Identities=14% Similarity=0.098 Sum_probs=38.2
Q ss_pred CCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 102 ~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
-..-+.|.++|..|+..|+. .||+|++=-.||.|||+|..++
T Consensus 25 Ql~~~ss~e~Y~~aL~~GcR--cvElD~wdg~~~ePvV~HG~tl 66 (227)
T cd08594 25 QLLSQSRVDMYARVLQAGCR--CVEVDCWDGPDGEPVVHHGYTL 66 (227)
T ss_pred cccCcccHHHHHHHHHhCCc--EEEEEeecCCCCCcEEeeCCCc
Confidence 35678889999999999999 9999999999999999998764
No 119
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=94.31 E-value=0.045 Score=55.96 Aligned_cols=42 Identities=7% Similarity=0.139 Sum_probs=36.1
Q ss_pred CCchhHHHHHHHHHCCCCeEEcceeeec--CCeEEEeccCcccc
Q 005970 420 YPSCTNLAYQKAISDGVDFIDCPVQMSK--DGVPFCLSFINLIN 461 (667)
Q Consensus 420 ~PENTl~Af~~A~~~Gad~iE~DV~lTk--Dg~~Vv~HD~~L~r 461 (667)
.-+-|..+|.+|+..||..||+|++=-. ||.|||+|..++..
T Consensus 27 ~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~ePiV~HG~tlts 70 (258)
T cd08623 27 AGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTT 70 (258)
T ss_pred CCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCCCEEeeCCCccc
Confidence 3466899999999999999999999665 68999999987753
No 120
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=94.29 E-value=0.045 Score=56.09 Aligned_cols=43 Identities=9% Similarity=0.087 Sum_probs=36.7
Q ss_pred CCCchhHHHHHHHHHCCCCeEEcceeee--cCCeEEEeccCcccc
Q 005970 419 DYPSCTNLAYQKAISDGVDFIDCPVQMS--KDGVPFCLSFINLIN 461 (667)
Q Consensus 419 ~~PENTl~Af~~A~~~Gad~iE~DV~lT--kDg~~Vv~HD~~L~r 461 (667)
..-+-|..+|.+|+..||..||+|++=- .||+|||+|..++..
T Consensus 26 l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~ePvV~HG~tlts 70 (261)
T cd08624 26 FSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTT 70 (261)
T ss_pred cCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCccc
Confidence 3456789999999999999999999954 378999999988743
No 121
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=93.90 E-value=0.061 Score=54.99 Aligned_cols=43 Identities=12% Similarity=0.039 Sum_probs=37.1
Q ss_pred CCCchhHHHHHHHHHCCCCeEEcceeeecC--CeEEEeccCcccc
Q 005970 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKD--GVPFCLSFINLIN 461 (667)
Q Consensus 419 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD--g~~Vv~HD~~L~r 461 (667)
..-+-|..+|..|+..||..||+|++=-.| |+|||+|..++..
T Consensus 26 l~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tlts 70 (257)
T cd08591 26 FGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTMCT 70 (257)
T ss_pred ccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCCcc
Confidence 345778899999999999999999997664 9999999988753
No 122
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=93.70 E-value=0.083 Score=53.83 Aligned_cols=42 Identities=17% Similarity=0.114 Sum_probs=38.3
Q ss_pred CCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 102 ~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
-...+-|.++|..|+..|+. .||+||+=-.||.|||+|..++
T Consensus 25 Ql~~~ss~e~y~~aL~~GcR--cvElD~Wdg~~~eP~V~HG~tl 66 (254)
T cd08633 25 QLMSQSRVDMYAWVLQAGCR--CVEVDCWDGPDGEPIVHHGYTL 66 (254)
T ss_pred ccCCccCHHHHHHHHHcCCc--EEEEEeecCCCCCcEEeeCCCc
Confidence 35667889999999999999 9999999999999999999876
No 123
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=93.60 E-value=0.072 Score=54.72 Aligned_cols=43 Identities=12% Similarity=0.115 Sum_probs=36.6
Q ss_pred CCCchhHHHHHHHHHCCCCeEEcceeee--cCCeEEEeccCcccc
Q 005970 419 DYPSCTNLAYQKAISDGVDFIDCPVQMS--KDGVPFCLSFINLIN 461 (667)
Q Consensus 419 ~~PENTl~Af~~A~~~Gad~iE~DV~lT--kDg~~Vv~HD~~L~r 461 (667)
..-+-|..||..|+..||..||+|++=- .|+.|||+|..++..
T Consensus 26 l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~eP~v~Hg~t~t~ 70 (258)
T cd08625 26 LTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFITHGFTMTT 70 (258)
T ss_pred cCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCCCEEeeCCcccc
Confidence 3557789999999999999999999954 357999999988754
No 124
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins. This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki
Probab=93.59 E-value=0.098 Score=52.59 Aligned_cols=42 Identities=19% Similarity=0.143 Sum_probs=38.2
Q ss_pred CCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 102 ~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
-.+.+-|.++|..|+..|+. .||+|++=-.||.|||+|..++
T Consensus 25 Ql~~~Ss~~~y~~aL~~GcR--cvElD~wdg~~~eP~v~HG~t~ 66 (226)
T cd08558 25 QLTGESSVEAYIRALLRGCR--CVELDCWDGPDGEPVVYHGHTL 66 (226)
T ss_pred ccCCccCHHHHHHHHHhCCc--EEEEEeecCCCCCeEEeeCCCC
Confidence 35678899999999999999 9999999999999999998764
No 125
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi
Probab=93.45 E-value=0.11 Score=52.36 Aligned_cols=51 Identities=10% Similarity=0.055 Sum_probs=40.8
Q ss_pred EEEEeCCC---CCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 93 FVVARGGF---SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 93 ~iiaHRG~---~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
+..+|.-+ .-..-+-|.++|..|+..|+. .||+||+=..||.|+|+|..++
T Consensus 13 I~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR--cvElD~Wdg~~~ep~V~HG~t~ 66 (228)
T cd08599 13 IFSSHNSYLTGNQLSSRSSTAPIIEALLRGCR--VIELDLWPGGRGDICVLHGGTL 66 (228)
T ss_pred EeccccccccCCccCCccCHHHHHHHHHhCCC--EEEEEeecCCCCCeEEEeCCCC
Confidence 34555432 223456788999999999999 9999999999999999998763
No 126
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=93.37 E-value=0.097 Score=53.56 Aligned_cols=42 Identities=17% Similarity=0.107 Sum_probs=38.2
Q ss_pred CCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 102 ~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
-..-+-|.++|..|+..|+. .||+||+=-.||.|||+|-.++
T Consensus 25 Ql~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~ep~v~HG~tl 66 (257)
T cd08595 25 QLVGPSDLDGYVSALRKGCR--CLEIDCWDGADNEPVVYHGYTL 66 (257)
T ss_pred cccCcccHHHHHHHHHhCCc--EEEEEeecCCCCCcEEecCCCc
Confidence 34568899999999999999 9999999999999999998775
No 127
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core
Probab=93.31 E-value=0.11 Score=53.19 Aligned_cols=42 Identities=24% Similarity=0.160 Sum_probs=38.0
Q ss_pred CCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 102 ~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
-..-+-|.++|..|+..|+. .||+|++=-+||.|||+|..++
T Consensus 25 Ql~~~ss~~~y~~aL~~GcR--cvElD~wdG~~~eP~V~HG~tl 66 (254)
T cd08596 25 QLKGESSVELYSQVLLTGCR--CVELDCWDGDDGMPIIYHGHTL 66 (254)
T ss_pred ccCCccCHHHHHHHHHcCCc--EEEEEeecCCCCCcEEeeCCCc
Confidence 34567889999999999999 9999999999999999999875
No 128
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=93.30 E-value=0.11 Score=53.00 Aligned_cols=41 Identities=15% Similarity=0.111 Sum_probs=37.1
Q ss_pred CCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 103 IFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 103 ~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
..-+-|.++|..|+..|+. .||+|++=-.||.|||+|-.|+
T Consensus 26 l~~~ss~e~y~~aL~~GcR--cvElD~Wdg~~~eP~V~HG~Tl 66 (253)
T cd08632 26 LLSQSKVDMYARVLQAGCR--CVEVDCWDGPDGEPVVHHGYTL 66 (253)
T ss_pred ccCcccHHHHHHHHHcCCc--EEEEEeecCCCCCcEEeeCCCC
Confidence 3556789999999999999 9999999999999999998765
No 129
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=93.23 E-value=0.11 Score=53.30 Aligned_cols=41 Identities=17% Similarity=0.087 Sum_probs=37.4
Q ss_pred CCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 103 IFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 103 ~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
..-+-|.++|..|+..|+. .||+||+=-.||.|||+|..++
T Consensus 26 l~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~eP~V~HG~tl 66 (258)
T cd08631 26 LRGQSSVEGYIRALKRGCR--CVEVDVWDGPNGEPIVYHGHTF 66 (258)
T ss_pred ccCccCHHHHHHHHHcCCc--EEEEEeecCCCCCcEEeeCCcc
Confidence 3557799999999999999 9999999999999999999876
No 130
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=93.17 E-value=0.11 Score=53.32 Aligned_cols=41 Identities=17% Similarity=0.059 Sum_probs=37.4
Q ss_pred CCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 103 IFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 103 ~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
..-+-|.++|..|+..|+. .||+||+=-.||.|||+|-.++
T Consensus 26 l~~~ss~~~y~~aL~~GcR--cvElD~wdg~~~eP~V~HG~tl 66 (258)
T cd08630 26 IGGPSSTEAYVRAFAQGCR--CVELDCWEGPGGEPVIYHGHTL 66 (258)
T ss_pred ccCcccHHHHHHHHHcCCc--EEEEEeecCCCCCcEEeeCCcc
Confidence 4556799999999999999 9999999999999999998865
No 131
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=92.91 E-value=0.14 Score=51.77 Aligned_cols=42 Identities=21% Similarity=0.102 Sum_probs=37.6
Q ss_pred CCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 102 ~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
-.+-+-|.++|..|+..|+. .||+||+=-.||.|||+|..++
T Consensus 25 Ql~~~ss~~~y~~aL~~GcR--cvElD~wdg~~~ep~V~HG~t~ 66 (231)
T cd08598 25 QLAGDSSVEGYIRALQRGCR--CVEIDVWDGDDGEPVVTHGYTL 66 (231)
T ss_pred ccCCccCHHHHHHHHHhCCc--EEEEEeecCCCCCcEEeeCCCC
Confidence 34567889999999999999 9999999988999999998765
No 132
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=92.87 E-value=0.13 Score=52.58 Aligned_cols=41 Identities=20% Similarity=0.133 Sum_probs=37.4
Q ss_pred CCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 103 IFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 103 ~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
..-+-|.++|..|+..|+. .||+|++=-.||.|||+|..++
T Consensus 26 l~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~eP~V~HG~tl 66 (258)
T cd08629 26 LTGPSSTEAYIRALCKGCR--CLELDCWDGPNQEPIIYHGYTF 66 (258)
T ss_pred cCCccCHHHHHHHHHhCCc--EEEEEeecCCCCCcEEeeCCCC
Confidence 4567789999999999999 9999999999999999998765
No 133
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=92.81 E-value=0.13 Score=52.59 Aligned_cols=41 Identities=20% Similarity=0.091 Sum_probs=37.0
Q ss_pred CCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 103 IFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 103 ~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
..-+-|.++|..|+..|+. .||+||+=-.||.|||+|..++
T Consensus 26 l~~~ss~~~y~~aL~~GcR--cvElD~Wdg~~~eP~V~HG~t~ 66 (254)
T cd08628 26 LRSESSTEAYIRCLRMGCR--CIELDCWDGPDGKPIIYHGWTR 66 (254)
T ss_pred eecCCCHHHHHHHHHcCCc--EEEEEeecCCCCCeEEeeCCCc
Confidence 3456788999999999999 9999999999999999998775
No 134
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=92.69 E-value=0.14 Score=52.62 Aligned_cols=41 Identities=22% Similarity=0.099 Sum_probs=37.5
Q ss_pred CCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 103 IFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 103 ~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
..-+-|.++|..|+..|+. .||+|++=-.||.|||+|-.++
T Consensus 26 l~~~ss~~~y~~aL~~GcR--cvElD~wdg~~~eP~v~HG~t~ 66 (257)
T cd08593 26 LKGPSSTEAYIRALKKGCR--CVELDCWDGPDGEPIIYHGHTL 66 (257)
T ss_pred ccCCccHHHHHHHHHhCCc--EEEEEeecCCCCCcEEeeCCcc
Confidence 4567899999999999999 9999999999999999998765
No 135
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=92.52 E-value=0.085 Score=60.54 Aligned_cols=42 Identities=17% Similarity=0.112 Sum_probs=39.4
Q ss_pred CCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCccc
Q 005970 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (667)
Q Consensus 419 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~ 460 (667)
..-|.++.||.+|+.+||.+||+|.+=-.||.||++|..|+.
T Consensus 333 lrSESSleaYar~LrMGCRCIELDCWdGpd~~pvIyHG~T~T 374 (1267)
T KOG1264|consen 333 LRSESSLEAYARCLRMGCRCIELDCWDGPDGKPVIYHGHTRT 374 (1267)
T ss_pred cccccCHHHHHHHHHhCCeEEEeecccCCCCCceEEecccee
Confidence 467999999999999999999999999999999999998853
No 136
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=92.26 E-value=0.16 Score=51.97 Aligned_cols=41 Identities=20% Similarity=0.075 Sum_probs=36.5
Q ss_pred CCCccHHHHHHHHHHcCCCCcEEEeeeeEec--CCeEEEccCCCC
Q 005970 103 IFPDSSSIAYSLTLITSAPSVILWCDVQLTK--DEAGICFPDLKL 145 (667)
Q Consensus 103 ~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTk--Dg~~vv~HD~~l 145 (667)
..-+-|.++|..|+..|+. .||+||+=-. ||.|||+|-.++
T Consensus 26 l~~~ss~~~y~~aL~~GcR--cvElD~wdg~~~~~eP~V~HG~tl 68 (257)
T cd08626 26 FGGKSSVEMYRQVLLAGCR--CIELDCWDGKGEDQEPIITHGKAM 68 (257)
T ss_pred ccCCccHHHHHHHHHcCCc--EEEEEecCCCCCCCCCEEeeCCCC
Confidence 4567889999999999999 9999999765 789999998876
No 137
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=91.67 E-value=0.21 Score=51.16 Aligned_cols=41 Identities=15% Similarity=0.166 Sum_probs=36.1
Q ss_pred CCCccHHHHHHHHHHcCCCCcEEEeeeeEec--CCeEEEccCCCC
Q 005970 103 IFPDSSSIAYSLTLITSAPSVILWCDVQLTK--DEAGICFPDLKL 145 (667)
Q Consensus 103 ~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTk--Dg~~vv~HD~~l 145 (667)
..-+-|.++|..|+..|+. .||+|++=-. ||.|||+|..++
T Consensus 26 l~g~ss~e~y~~aL~~GcR--cvElD~wdG~~~~~ePiV~HG~tl 68 (258)
T cd08623 26 LAGNSSVEMYRQVLLSGCR--CVELDCWKGRTAEEEPVITHGFTM 68 (258)
T ss_pred cCCccCHHHHHHHHHcCCC--EEEEEeeCCCCCCCCCEEeeCCCc
Confidence 4457789999999999999 9999999776 689999999865
No 138
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=91.60 E-value=0.21 Score=51.27 Aligned_cols=42 Identities=21% Similarity=0.125 Sum_probs=36.7
Q ss_pred CCCCccHHHHHHHHHHcCCCCcEEEeeeeEec--CCeEEEccCCCC
Q 005970 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLTK--DEAGICFPDLKL 145 (667)
Q Consensus 102 ~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTk--Dg~~vv~HD~~l 145 (667)
-..-+-|.++|..|+..|+. .||+||+=-. ||.|||+|..++
T Consensus 25 Ql~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~~~ePvV~HG~tl 68 (261)
T cd08624 25 QFSGLSSPEMYRQVLLSGCR--CVELDCWKGKPPDEEPIITHGFTM 68 (261)
T ss_pred ccCCccCHHHHHHHHHcCCc--EEEEEecCCCCCCCCCEEeeCCCc
Confidence 34567799999999999999 9999999653 789999999876
No 139
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=91.02 E-value=0.27 Score=50.34 Aligned_cols=41 Identities=20% Similarity=0.064 Sum_probs=36.8
Q ss_pred CCCccHHHHHHHHHHcCCCCcEEEeeeeEecC--CeEEEccCCCC
Q 005970 103 IFPDSSSIAYSLTLITSAPSVILWCDVQLTKD--EAGICFPDLKL 145 (667)
Q Consensus 103 ~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkD--g~~vv~HD~~l 145 (667)
..-+-|.++|..|+..|+. .||+||+=-.| |.|||+|-.++
T Consensus 26 l~g~ss~e~y~~aL~~GcR--cvElD~Wdg~~~~~eP~V~HG~tl 68 (257)
T cd08591 26 FGGKSSVEMYRQVLLSGCR--CIELDCWDGKGEDEEPIITHGKTM 68 (257)
T ss_pred ccCcccHHHHHHHHHhCCc--EEEEEeecCCCCCCCCEEeeCCCC
Confidence 4567889999999999999 99999998875 99999998876
No 140
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=90.14 E-value=0.34 Score=49.82 Aligned_cols=42 Identities=17% Similarity=0.079 Sum_probs=36.3
Q ss_pred CCCCccHHHHHHHHHHcCCCCcEEEeeeeEe--cCCeEEEccCCCC
Q 005970 102 GIFPDSSSIAYSLTLITSAPSVILWCDVQLT--KDEAGICFPDLKL 145 (667)
Q Consensus 102 ~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lT--kDg~~vv~HD~~l 145 (667)
-..-+-|.+||..|+..|+. .||+||+=- .|+.|||+|..++
T Consensus 25 Ql~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~~~eP~v~Hg~t~ 68 (258)
T cd08625 25 QLTGLSSVEMYRQVLLTGCR--CIELDCWKGRPPEEEPFITHGFTM 68 (258)
T ss_pred ccCCccCHHHHHHHHHcCCC--EEEEEecCCCCCCCCCEEeeCCcc
Confidence 34568889999999999999 999999965 3579999999875
No 141
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=89.52 E-value=0.26 Score=56.79 Aligned_cols=49 Identities=14% Similarity=0.019 Sum_probs=42.5
Q ss_pred EEeCC---CCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 95 VARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 95 iaHRG---~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
..|-- |--..-|.|++||.+|+.+|+. .||+|.+=-.||.+|++|..|+
T Consensus 322 SSHNTYLTGDQlrSESSleaYar~LrMGCR--CIELDCWdGpd~~pvIyHG~T~ 373 (1267)
T KOG1264|consen 322 SSHNTYLTGDQLRSESSLEAYARCLRMGCR--CIELDCWDGPDGKPVIYHGHTR 373 (1267)
T ss_pred ccCcceecccccccccCHHHHHHHHHhCCe--EEEeecccCCCCCceEEeccce
Confidence 45554 2334689999999999999999 9999999999999999999985
No 142
>PLN02230 phosphoinositide phospholipase C 4
Probab=89.45 E-value=0.4 Score=55.04 Aligned_cols=55 Identities=13% Similarity=0.135 Sum_probs=43.1
Q ss_pred ceeEEEecCC---CCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccc
Q 005970 407 NLLVISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN 461 (667)
Q Consensus 407 ~~~iiaHRG~---~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r 461 (667)
-.+-.+|.-+ .-..-+-|..+|.+|+..||..||+|++=-.+|.|||+|..++..
T Consensus 124 YfI~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~t~t~ 181 (598)
T PLN02230 124 YFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLWPRGTDDVCVKHGRTLTK 181 (598)
T ss_pred heeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEeccCCCCCCcEEeeCCCCcC
Confidence 3445556532 234456688999999999999999999987788999999988754
No 143
>PF10223 DUF2181: Uncharacterized conserved protein (DUF2181); InterPro: IPR019356 This is region of approximately 250 residues with no known function.
Probab=87.72 E-value=2.5 Score=43.23 Aligned_cols=36 Identities=19% Similarity=0.331 Sum_probs=30.1
Q ss_pred chhHHHHHHHHHCCCCeEEcceeeec------CCeEEEeccC
Q 005970 422 SCTNLAYQKAISDGVDFIDCPVQMSK------DGVPFCLSFI 457 (667)
Q Consensus 422 ENTl~Af~~A~~~Gad~iE~DV~lTk------Dg~~Vv~HD~ 457 (667)
=|+.+..+.|+...+.+||.||.+-+ +++||..|-+
T Consensus 11 vNsk~~L~~aL~~~~~miEaDV~l~~~~~~~~~~~PIMahPP 52 (244)
T PF10223_consen 11 VNSKAELEEALSSDIMMIEADVLLGGLNTGNEDGIPIMAHPP 52 (244)
T ss_pred cCCHHHHHHHhCCCCCEEEEEEEeecccCCCCCCCceeeCCC
Confidence 38889999999999999999999984 6677777754
No 144
>PLN02228 Phosphoinositide phospholipase C
Probab=86.94 E-value=0.74 Score=52.62 Aligned_cols=43 Identities=14% Similarity=0.047 Sum_probs=36.3
Q ss_pred CCCchhHHHHHHHHHCCCCeEEcceeeecCCe-EEEeccCcccc
Q 005970 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGV-PFCLSFINLIN 461 (667)
Q Consensus 419 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~-~Vv~HD~~L~r 461 (667)
..-+-|..+|.+|+..||..||+|++=-.||. |||+|..++..
T Consensus 130 l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~p~v~Hg~t~ts 173 (567)
T PLN02228 130 VNSRSSVEPIVQALRKGVKVIELDLWPNPSGNAAEVRHGRTLTS 173 (567)
T ss_pred ccCccCHHHHHHHHHcCCcEEEEEeccCCCCCCCEEEeCCcccC
Confidence 45677899999999999999999999555565 89999988754
No 145
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=85.44 E-value=0.92 Score=52.52 Aligned_cols=59 Identities=15% Similarity=0.117 Sum_probs=46.6
Q ss_pred ccCCceeEEEecCC---CCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccc
Q 005970 403 SKSANLLVISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN 461 (667)
Q Consensus 403 ~~~~~~~iiaHRG~---~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r 461 (667)
+...-.+--+|--+ .-..-+-++.+|-.|++.||..||+|++=-.+|.|||+|-.|+.-
T Consensus 294 PLsHYFI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD~Wdg~~~epvV~HG~TlTs 355 (746)
T KOG0169|consen 294 PLSHYFISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELDCWDGPNGEPVVYHGHTLTS 355 (746)
T ss_pred cchhheEeccccceecccccCCccccHHHHHHHHhCCeEEEEecccCCCCCeeEecCccccc
Confidence 33444555666642 223458899999999999999999999999999999999998753
No 146
>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
Probab=84.86 E-value=14 Score=38.07 Aligned_cols=185 Identities=13% Similarity=0.130 Sum_probs=95.5
Q ss_pred HHHHHHHhhcCCceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhH-HhhcHHHHHh-hcceecCCCcc
Q 005970 239 SFVLSVSRSVVVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGS-LLKNLTFIKT-FASGILVPKDY 316 (667)
Q Consensus 239 ~~l~~~l~~~~~~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~-~~~~l~~i~~-~a~~i~~~~~~ 316 (667)
+.+++.+.+.+...+++ .+..++...+... .+.+++..+.....+.+.. |.. +...+++..+ -+++++... +
T Consensus 46 e~~v~~v~~~g~dav~~-~~G~~~~~~~~y~-~dvplivkl~~~t~l~~~~---~~~~~~~~ve~ai~lgadAV~~~V-y 119 (265)
T COG1830 46 ENIVAKVAEAGADAVAM-TPGIARSVHRGYA-HDVPLIVKLNGSTSLSPDP---NDQVLVATVEDAIRLGADAVGATV-Y 119 (265)
T ss_pred HHHHHHHHhcCCCEEEe-cHhHHhhcCcccc-CCcCEEEEeccccccCCCc---ccceeeeeHHHHHhCCCcEEEEEE-e
Confidence 34566666666654433 5556666655432 2566666554443333222 221 1123443332 244443211 1
Q ss_pred ccccCCCCCCCCChHHHHHHHHcCCeEEEEeccC-CCC-cccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhhhh
Q 005970 317 IWPVDESLYLLPHTTIVLDAHKERLEVFASNFAN-DIP-ISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDC 394 (667)
Q Consensus 317 ~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~-~~~-~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~~ 394 (667)
+........+..-...++.||+.|+.+..|..-. ... ..+....|-.....++-. ++|+|.|=|+||..-..+.+-
T Consensus 120 ~Gse~e~~~i~~~~~v~~~a~~~Gmp~v~~~YpRg~~~~~~~~~d~~~v~~aaRlaa--elGADIiK~~ytg~~e~F~~v 197 (265)
T COG1830 120 VGSETEREMIENISQVVEDAHELGMPLVAWAYPRGPAIKDEYHRDADLVGYAARLAA--ELGADIIKTKYTGDPESFRRV 197 (265)
T ss_pred cCCcchHHHHHHHHHHHHHHHHcCCceEEEEeccCCcccccccccHHHHHHHHHHHH--HhcCCeEeecCCCChHHHHHH
Confidence 1111111112222458899999999999997642 211 111111122222222322 566999999999755444433
Q ss_pred hhhcCcCcccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeE
Q 005970 395 FAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFI 439 (667)
Q Consensus 395 ~~~~~~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~i 439 (667)
... . +-|.|++ -|.++.-++..+..-..|++.||.++
T Consensus 198 v~~-----~--~vpVvia-GG~k~~~~~~~l~~~~~ai~aGa~G~ 234 (265)
T COG1830 198 VAA-----C--GVPVVIA-GGPKTETEREFLEMVTAAIEAGAMGV 234 (265)
T ss_pred HHh-----C--CCCEEEe-CCCCCCChHHHHHHHHHHHHccCcch
Confidence 221 1 1355554 23344588999999999999999875
No 147
>PLN02952 phosphoinositide phospholipase C
Probab=84.28 E-value=1.2 Score=51.25 Aligned_cols=54 Identities=17% Similarity=0.213 Sum_probs=41.2
Q ss_pred eeEEEecC---CCCCCCchhHHHHHHHHHCCCCeEEcceeeecCC-eEEEeccCcccc
Q 005970 408 LLVISKNG---ASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDG-VPFCLSFINLIN 461 (667)
Q Consensus 408 ~~iiaHRG---~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg-~~Vv~HD~~L~r 461 (667)
.+-.+|.- +.-..-+-|..+|.+|+..||..||+|++=-.|| .|||+|..++..
T Consensus 133 fI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~p~v~Hg~t~ts 190 (599)
T PLN02952 133 FIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDLWPGSTKDEILVLHGRTLTT 190 (599)
T ss_pred eeeccccccccCCccCCcCCHHHHHHHHHcCCcEEEEEeecCCCCCCCEEEeCCcccc
Confidence 44455653 2234567789999999999999999999966655 489999988754
No 148
>PF10223 DUF2181: Uncharacterized conserved protein (DUF2181); InterPro: IPR019356 This is region of approximately 250 residues with no known function.
Probab=83.94 E-value=4.6 Score=41.30 Aligned_cols=36 Identities=19% Similarity=0.063 Sum_probs=31.5
Q ss_pred ccHHHHHHHHHHcCCCCcEEEeeeeEec------CCeEEEccCC
Q 005970 106 DSSSIAYSLTLITSAPSVILWCDVQLTK------DEAGICFPDL 143 (667)
Q Consensus 106 ENTl~a~~~A~~~g~d~~~vE~Dv~lTk------Dg~~vv~HD~ 143 (667)
=|+.+.++.|++..+. +||.||.+-+ +++||+.|.+
T Consensus 11 vNsk~~L~~aL~~~~~--miEaDV~l~~~~~~~~~~~PIMahPP 52 (244)
T PF10223_consen 11 VNSKAELEEALSSDIM--MIEADVLLGGLNTGNEDGIPIMAHPP 52 (244)
T ss_pred cCCHHHHHHHhCCCCC--EEEEEEEeecccCCCCCCCceeeCCC
Confidence 3889999999999998 9999999984 7888888875
No 149
>PRK06852 aldolase; Validated
Probab=82.60 E-value=7.3 Score=41.21 Aligned_cols=98 Identities=16% Similarity=0.140 Sum_probs=57.9
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCCh--HH-HHHHHHhCCCcccceEecCCC-----CCchhhhhhhhhcCcC
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDP--LT-EYLSFIDNGDFSVDGVLSDFP-----LTPSAAVDCFAHLGKN 401 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~--~~-e~~~li~~G~~gVDGIiTD~P-----~~~~~~l~~~~~~~~~ 401 (667)
.++++.||+.|+.+.+|..-...... -..|+ .. ..+... +||+|.|=|+|| .....+.+....
T Consensus 157 ~~v~~ea~~~GlPll~~~yprG~~i~--~~~~~~~ia~aaRiaa---ELGADIVKv~y~~~~~~g~~e~f~~vv~~---- 227 (304)
T PRK06852 157 AQIIYEAHKHGLIAVLWIYPRGKAVK--DEKDPHLIAGAAGVAA---CLGADFVKVNYPKKEGANPAELFKEAVLA---- 227 (304)
T ss_pred HHHHHHHHHhCCcEEEEeeccCcccC--CCccHHHHHHHHHHHH---HHcCCEEEecCCCcCCCCCHHHHHHHHHh----
Confidence 45789999999999999874321110 00111 11 123334 455999999999 433333332211
Q ss_pred cccCCceeEEEecCCCCCCCchhHHHHHHHHH-CCCCeEE
Q 005970 402 ASKSANLLVISKNGASGDYPSCTNLAYQKAIS-DGVDFID 440 (667)
Q Consensus 402 ~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~-~Gad~iE 440 (667)
-++.|.+|+ |++..-.+-.+.-.+.|++ .||.++=
T Consensus 228 --~g~vpVvia--GG~k~~~~e~L~~v~~ai~~aGa~Gv~ 263 (304)
T PRK06852 228 --AGRTKVVCA--GGSSTDPEEFLKQLYEQIHISGASGNA 263 (304)
T ss_pred --CCCCcEEEe--CCCCCCHHHHHHHHHHHHHHcCCceee
Confidence 123455554 5555555667788888989 8988763
No 150
>PLN02230 phosphoinositide phospholipase C 4
Probab=81.96 E-value=1.5 Score=50.54 Aligned_cols=52 Identities=8% Similarity=-0.005 Sum_probs=43.2
Q ss_pred EEEEeCC---CCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCc
Q 005970 93 FVVARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLD 146 (667)
Q Consensus 93 ~iiaHRG---~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~ 146 (667)
+-.+|.- |.-..-+-|.++|..|+..|+. .||+|++=-.+|.|||+|..++-
T Consensus 126 I~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~ep~v~HG~t~t 180 (598)
T PLN02230 126 IFTGHNSYLTGNQLSSNCSELPIADALRRGVR--VVELDLWPRGTDDVCVKHGRTLT 180 (598)
T ss_pred eecccCccccCCcccCccCHHHHHHHHHcCCc--EEEEeccCCCCCCcEEeeCCCCc
Confidence 4567774 2345667799999999999999 99999998788999999998863
No 151
>PLN02223 phosphoinositide phospholipase C
Probab=81.29 E-value=1.3 Score=50.18 Aligned_cols=39 Identities=10% Similarity=-0.010 Sum_probs=33.4
Q ss_pred chhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCccc
Q 005970 422 SCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (667)
Q Consensus 422 ENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~ 460 (667)
+-|..+|.+|+..||..||+|++=-.++.++|.|-.++.
T Consensus 134 ~ss~e~y~~aL~~GcRcvElD~W~~~~~~~~v~hG~tlt 172 (537)
T PLN02223 134 LYSIEPIIDALEQGVRVVELDLLPDGKDGICVRPKWNFE 172 (537)
T ss_pred cccHHHHHHHHHcCCcEEEEEecCCCCCCCeEeeCCcee
Confidence 378999999999999999999995455567899998864
No 152
>PLN02222 phosphoinositide phospholipase C 2
Probab=81.27 E-value=1.7 Score=49.79 Aligned_cols=55 Identities=16% Similarity=0.201 Sum_probs=40.8
Q ss_pred ceeEEEecCC---CCCCCchhHHHHHHHHHCCCCeEEcceeeecCCe-EEEeccCcccc
Q 005970 407 NLLVISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGV-PFCLSFINLIN 461 (667)
Q Consensus 407 ~~~iiaHRG~---~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~-~Vv~HD~~L~r 461 (667)
-.+-.+|.-+ .-..-+-|..+|.+|+..||..||+|++=-.||. |+|+|-.++..
T Consensus 112 YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~~~v~HG~tlt~ 170 (581)
T PLN02222 112 YFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSDKDDIDVLHGMTLTT 170 (581)
T ss_pred heeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccCCCCCCCeEeeCCcccC
Confidence 3444556531 2345577889999999999999999999655654 57999987654
No 153
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a
Probab=80.35 E-value=2.3 Score=44.46 Aligned_cols=40 Identities=13% Similarity=0.129 Sum_probs=36.4
Q ss_pred CchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCccc
Q 005970 421 PSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (667)
Q Consensus 421 PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~ 460 (667)
-.....++..+++.|+.++|+||+-.+|+.++|+|..++.
T Consensus 33 ~~tq~~~~~~qL~~G~R~lDir~~~~~~~~~~v~HG~~~~ 72 (274)
T cd00137 33 GLTQTEMYRQQLLSGCRCVDIRCWDGKPEEPIIYHGPTFL 72 (274)
T ss_pred CcCcHHHHHHHHHcCCcEEEEEeecCCCCCeEEEECCccc
Confidence 5788999999999999999999999999999999987654
No 154
>PRK08227 autoinducer 2 aldolase; Validated
Probab=78.73 E-value=8.2 Score=40.04 Aligned_cols=94 Identities=11% Similarity=0.008 Sum_probs=57.6
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHH-HHHHHHhCCCcccceEecCCCC-CchhhhhhhhhcCcCcccCCc
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLT-EYLSFIDNGDFSVDGVLSDFPL-TPSAAVDCFAHLGKNASKSAN 407 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~-e~~~li~~G~~gVDGIiTD~P~-~~~~~l~~~~~~~~~~~~~~~ 407 (667)
..+++.||+.|+.+.+|.-..+... + ..|-.+ ..+... +||+|-|=|+||. ...++.+ -.+.
T Consensus 130 ~~v~~ea~~~G~Plla~~prG~~~~--~-~~~~ia~aaRiaa---ELGADiVK~~y~~~~f~~vv~----------a~~v 193 (264)
T PRK08227 130 IQLVDAGLRYGMPVMAVTAVGKDMV--R-DARYFSLATRIAA---EMGAQIIKTYYVEEGFERITA----------GCPV 193 (264)
T ss_pred HHHHHHHHHhCCcEEEEecCCCCcC--c-hHHHHHHHHHHHH---HHcCCEEecCCCHHHHHHHHH----------cCCC
Confidence 4578999999999999986543211 0 001111 123334 4559999999996 1222221 1133
Q ss_pred eeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEc
Q 005970 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDC 441 (667)
Q Consensus 408 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~ 441 (667)
|.+|+ |++..-.+-.+.-.+.|++.||.++=+
T Consensus 194 PVvia--GG~k~~~~~~L~~v~~ai~aGa~Gv~~ 225 (264)
T PRK08227 194 PIVIA--GGKKLPERDALEMCYQAIDEGASGVDM 225 (264)
T ss_pred cEEEe--CCCCCCHHHHHHHHHHHHHcCCceeee
Confidence 56554 555554466888889999999988743
No 155
>PLN02228 Phosphoinositide phospholipase C
Probab=78.65 E-value=2.2 Score=48.82 Aligned_cols=51 Identities=10% Similarity=0.018 Sum_probs=41.2
Q ss_pred EEEEeCCC---CCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCe-EEEccCCCC
Q 005970 93 FVVARGGF---SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEA-GICFPDLKL 145 (667)
Q Consensus 93 ~iiaHRG~---~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~-~vv~HD~~l 145 (667)
+-.+|.-+ .-...+-|.++|..|+..|+. .||+|++=-.||. |||+|..++
T Consensus 117 I~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~~~p~v~Hg~t~ 171 (567)
T PLN02228 117 VYTGHNSYLTGNQVNSRSSVEPIVQALRKGVK--VIELDLWPNPSGNAAEVRHGRTL 171 (567)
T ss_pred eecccCccccCCcccCccCHHHHHHHHHcCCc--EEEEEeccCCCCCCCEEEeCCcc
Confidence 35677652 345678899999999999999 9999999666665 899999876
No 156
>PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B ....
Probab=78.33 E-value=2.9 Score=39.17 Aligned_cols=39 Identities=15% Similarity=0.252 Sum_probs=31.3
Q ss_pred CchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcc
Q 005970 421 PSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINL 459 (667)
Q Consensus 421 PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L 459 (667)
..+.-.++..+++.|+.++|+||+...++.++++|....
T Consensus 25 ~~~Q~~~i~~QL~~GiR~lDlrv~~~~~~~~~v~Hg~~~ 63 (146)
T PF00388_consen 25 SKTQSWSIREQLESGIRYLDLRVWDGNDGELVVYHGITS 63 (146)
T ss_dssp C-B-SHHHHHHHHTT--EEEEEEEEETTSSEEEEETTSE
T ss_pred cCcchHhHHHHHhccCceEEEEEEcCCCCceEEEeCCEe
Confidence 567778999999999999999999999999999996554
No 157
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=75.93 E-value=2.4 Score=49.31 Aligned_cols=50 Identities=12% Similarity=0.048 Sum_probs=42.2
Q ss_pred EEEeCCC---CCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 94 VVARGGF---SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 94 iiaHRG~---~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
-.+|--+ .-..-+-|+++|-.|++.|+. .||+|++--.+|.|||+|-.|+
T Consensus 301 ~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR--~vElD~Wdg~~~epvV~HG~Tl 353 (746)
T KOG0169|consen 301 SSSHNTYLTGDQLGGPSSVEGYIRALKKGCR--CVELDCWDGPNGEPVVYHGHTL 353 (746)
T ss_pred eccccceecccccCCccccHHHHHHHHhCCe--EEEEecccCCCCCeeEecCccc
Confidence 3556542 233568899999999999999 9999999999999999999887
No 158
>PLN02952 phosphoinositide phospholipase C
Probab=74.82 E-value=3.5 Score=47.59 Aligned_cols=51 Identities=10% Similarity=0.060 Sum_probs=41.4
Q ss_pred EEEEeCC---CCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCC-eEEEccCCCC
Q 005970 93 FVVARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDE-AGICFPDLKL 145 (667)
Q Consensus 93 ~iiaHRG---~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg-~~vv~HD~~l 145 (667)
+-.+|.- |.-...+-|.++|..|+..|+. .||+|++=-.|| .|||+|-.++
T Consensus 134 I~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR--cvElD~wdg~~~~~p~v~Hg~t~ 188 (599)
T PLN02952 134 IYTGHNSYLTGNQLSSDCSEVPIVKALQRGVR--VIELDLWPGSTKDEILVLHGRTL 188 (599)
T ss_pred eeccccccccCCccCCcCCHHHHHHHHHcCCc--EEEEEeecCCCCCCCEEEeCCcc
Confidence 4567774 3445678899999999999999 999999976665 4899999876
No 159
>PRK09250 fructose-bisphosphate aldolase; Provisional
Probab=70.98 E-value=19 Score=38.68 Aligned_cols=190 Identities=11% Similarity=0.041 Sum_probs=91.7
Q ss_pred HHHHHHHhhcCCceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhh-cceecCCCccc
Q 005970 239 SFVLSVSRSVVVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF-ASGILVPKDYI 317 (667)
Q Consensus 239 ~~l~~~l~~~~~~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~-a~~i~~~~~~~ 317 (667)
+.+++.+.+.|..-+.. ....++...... ..+.+++..+.....+.... .....+...+++..+. |++++.. +
T Consensus 94 ~~~i~~a~~~g~dAv~~-~~G~l~~~~~~~-~~~iplIlkln~~t~l~~~~-~~~~~l~~sVedAlrLGAdAV~~t---v 167 (348)
T PRK09250 94 ENIVKLAIEAGCNAVAS-TLGVLEAVARKY-AHKIPFILKLNHNELLSYPN-TYDQALTASVEDALRLGAVAVGAT---I 167 (348)
T ss_pred HHHHHHHHhcCCCEEEe-CHHHHHhccccc-cCCCCEEEEeCCCCCCCCCC-CCcccceecHHHHHHCCCCEEEEE---E
Confidence 34566666666542222 255555532222 12467776554332220101 1122233345554444 6665541 1
Q ss_pred cccCC--CCCCCCChHHHHHHHHcCCeEEEEeccCC-CC-cccCCCCCh--HHH-HHHHHhCCCcccceEecCCCCCchh
Q 005970 318 WPVDE--SLYLLPHTTIVLDAHKERLEVFASNFAND-IP-ISFNYSYDP--LTE-YLSFIDNGDFSVDGVLSDFPLTPSA 390 (667)
Q Consensus 318 ~~~~~--~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~-~~-~~~~~~~d~--~~e-~~~li~~G~~gVDGIiTD~P~~~~~ 390 (667)
.+-+. ...+..-..+++.||+.|+.+.+|..-.. .. ...+|..++ .+. ..... ++|+|-|=|++|.....
T Consensus 168 y~Gs~~E~~ml~~l~~i~~ea~~~GlPlv~~~YpRG~~i~~~~d~~~~~d~Ia~AaRiaa---ELGADIVKv~yp~~~~~ 244 (348)
T PRK09250 168 YFGSEESRRQIEEISEAFEEAHELGLATVLWSYLRNSAFKKDGDYHTAADLTGQANHLAA---TIGADIIKQKLPTNNGG 244 (348)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecccCcccCCcccccccHHHHHHHHHHHH---HHcCCEEEecCCCChhh
Confidence 11111 00111224578999999999999987432 11 111111111 121 23333 55699999999975433
Q ss_pred hhhh---------------------hhhcCcCcccCCceeEEEecCCCCCCCchhHHHHHHH---HHCCCCeE
Q 005970 391 AVDC---------------------FAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKA---ISDGVDFI 439 (667)
Q Consensus 391 ~l~~---------------------~~~~~~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A---~~~Gad~i 439 (667)
+.+- ....-..-..++.|.+++ |++..-.+..+...+.| ++.|+.++
T Consensus 245 f~~v~~~~~~~~~~~~~~~~~~~~~~~~~V~ac~ag~vpVviA--GG~k~~~~e~L~~v~~a~~~i~aGa~Gv 315 (348)
T PRK09250 245 YKAINFGKTDDRVYSKLTSDHPIDLVRYQVANCYMGRRGLINS--GGASKGEDDLLDAVRTAVINKRAGGMGL 315 (348)
T ss_pred HHHhhcccccccccccccccchHHHHHHHHHhhccCCceEEEe--CCCCCCHHHHHHHHHHHHHhhhcCCcch
Confidence 2221 000000011124455554 55554556788888889 99998776
No 160
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a
Probab=69.29 E-value=7.4 Score=40.68 Aligned_cols=40 Identities=13% Similarity=0.083 Sum_probs=36.2
Q ss_pred CCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 104 FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 104 ~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
+......++..++..|+. ++|+||+-.+|+.++++|-.++
T Consensus 32 ~~~tq~~~~~~qL~~G~R--~lDir~~~~~~~~~~v~HG~~~ 71 (274)
T cd00137 32 WGLTQTEMYRQQLLSGCR--CVDIRCWDGKPEEPIIYHGPTF 71 (274)
T ss_pred cCcCcHHHHHHHHHcCCc--EEEEEeecCCCCCeEEEECCcc
Confidence 357889999999999999 9999999999999999998654
No 161
>PLN02222 phosphoinositide phospholipase C 2
Probab=67.34 E-value=6 Score=45.56 Aligned_cols=51 Identities=12% Similarity=0.088 Sum_probs=40.4
Q ss_pred EEEEeCC---CCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCe-EEEccCCCC
Q 005970 93 FVVARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEA-GICFPDLKL 145 (667)
Q Consensus 93 ~iiaHRG---~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~-~vv~HD~~l 145 (667)
+-.+|.- |.-..-+-|.++|..|+..|+. .||+|++=-.||. ++|+|-.++
T Consensus 114 I~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR--cvElD~wdg~~~~~~~v~HG~tl 168 (581)
T PLN02222 114 IFTGHNSYLTGNQLSSDCSEVPIIDALKKGVR--VIELDIWPNSDKDDIDVLHGMTL 168 (581)
T ss_pred eecccCccccCCcccCccCHHHHHHHHHcCCc--EEEEEeccCCCCCCCeEeeCCcc
Confidence 4567774 2345678889999999999999 9999999766665 579998775
No 162
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=65.82 E-value=26 Score=35.77 Aligned_cols=39 Identities=13% Similarity=0.020 Sum_probs=31.5
Q ss_pred ChHHHHHHHHc---CCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEec
Q 005970 329 HTTIVLDAHKE---RLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLS 382 (667)
Q Consensus 329 ~~~~v~~ah~~---Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiT 382 (667)
..+.++.++.. |+.|++++.+ +..+.+++.+.| ++.|+.
T Consensus 109 ~~~tv~aa~~L~~~Gf~vlpyc~d------------d~~~ar~l~~~G---~~~vmP 150 (248)
T cd04728 109 PIETLKAAEILVKEGFTVLPYCTD------------DPVLAKRLEDAG---CAAVMP 150 (248)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCC------------CHHHHHHHHHcC---CCEeCC
Confidence 35578888888 9999999984 347788888776 999965
No 163
>PLN02223 phosphoinositide phospholipase C
Probab=65.25 E-value=5.8 Score=44.98 Aligned_cols=51 Identities=10% Similarity=0.064 Sum_probs=38.4
Q ss_pred EEEEeCCC---CCCCCc-cHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 93 FVVARGGF---SGIFPD-SSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 93 ~iiaHRG~---~~~~pE-NTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
+-.+|.-+ .-..-+ -|.++|..|+..|+. .||+|++--.++.+++.|-.++
T Consensus 117 I~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcR--cvElD~W~~~~~~~~v~hG~tl 171 (537)
T PLN02223 117 IHTSLKSYFTGNNVFGKLYSIEPIIDALEQGVR--VVELDLLPDGKDGICVRPKWNF 171 (537)
T ss_pred eeccccccccCCcccCCcccHHHHHHHHHcCCc--EEEEEecCCCCCCCeEeeCCce
Confidence 34667652 223344 899999999999999 9999999545556788998775
No 164
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea. Catalysis of the enzymes proceeds via a Schiff-base mechanism like other class I aldolases, although this subfamily is clearly divergent based on sequence similarity to other class I and class II (metal dependent) aldolase subfamilies.
Probab=64.41 E-value=49 Score=33.38 Aligned_cols=97 Identities=15% Similarity=0.071 Sum_probs=55.0
Q ss_pred hHHHHHHHHcCCeEEEEeccCCC-CcccCCCCChHHH-HHHHHhCCCcccceEecCCCCCchhhhhhhhhcCcCcccCCc
Q 005970 330 TTIVLDAHKERLEVFASNFANDI-PISFNYSYDPLTE-YLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSAN 407 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~-~~~~~~~~d~~~e-~~~li~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~~ 407 (667)
..+++.+++.|++++++...... ... ....+.... .+...+.| +|.|-|.+|... +.++..... . +.
T Consensus 112 ~~v~~~~~~~g~~~iie~~~~g~~~~~-~~~~~~i~~~~~~a~~~G---aD~Ik~~~~~~~-~~~~~i~~~----~--~~ 180 (235)
T cd00958 112 ARVAAEAHKYGLPLIAWMYPRGPAVKN-EKDPDLIAYAARIGAELG---ADIVKTKYTGDA-ESFKEVVEG----C--PV 180 (235)
T ss_pred HHHHHHHHHcCCCEEEEEeccCCcccC-ccCHHHHHHHHHHHHHHC---CCEEEecCCCCH-HHHHHHHhc----C--CC
Confidence 44677889999999997753210 000 000011222 34466666 999999877532 222222110 1 12
Q ss_pred eeEEEecCC-CCCCCchhHHHHHHHHHCCCCeE
Q 005970 408 LLVISKNGA-SGDYPSCTNLAYQKAISDGVDFI 439 (667)
Q Consensus 408 ~~iiaHRG~-~~~~PENTl~Af~~A~~~Gad~i 439 (667)
|.++. |+ ...-++-++.-.+.+++.||++|
T Consensus 181 pvv~~--GG~~~~~~~~~l~~~~~~~~~Ga~gv 211 (235)
T cd00958 181 PVVIA--GGPKKDSEEEFLKMVYDAMEAGAAGV 211 (235)
T ss_pred CEEEe--CCCCCCCHHHHHHHHHHHHHcCCcEE
Confidence 33333 44 34467778888899999999876
No 165
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=63.74 E-value=6.1 Score=46.63 Aligned_cols=37 Identities=11% Similarity=0.183 Sum_probs=34.0
Q ss_pred hHHHHHHHHHCCCCeEEccee--eecCCeEEEeccCccc
Q 005970 424 TNLAYQKAISDGVDFIDCPVQ--MSKDGVPFCLSFINLI 460 (667)
Q Consensus 424 Tl~Af~~A~~~Gad~iE~DV~--lTkDg~~Vv~HD~~L~ 460 (667)
+.+-|++++-.||.+||+|+| -++|++||+.|..+.-
T Consensus 343 SvEmYRQvLLsGcRCVELDcWdgk~~d~EPvITHG~tm~ 381 (1189)
T KOG1265|consen 343 SVEMYRQVLLSGCRCVELDCWDGKGEDEEPVITHGFTMT 381 (1189)
T ss_pred hHHHHHHHHHhcCceEEeeeecCCCCCCCceeecccchh
Confidence 889999999999999999999 6788999999998753
No 166
>PRK00208 thiG thiazole synthase; Reviewed
Probab=62.72 E-value=34 Score=35.06 Aligned_cols=39 Identities=10% Similarity=-0.012 Sum_probs=31.4
Q ss_pred ChHHHHHHHHc---CCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEec
Q 005970 329 HTTIVLDAHKE---RLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLS 382 (667)
Q Consensus 329 ~~~~v~~ah~~---Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiT 382 (667)
....++.++.. |+.|++++.+ +..+.+++.+.| ++.|+.
T Consensus 109 ~~~tv~aa~~L~~~Gf~vlpyc~~------------d~~~ak~l~~~G---~~~vmP 150 (250)
T PRK00208 109 PIETLKAAEILVKEGFVVLPYCTD------------DPVLAKRLEEAG---CAAVMP 150 (250)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCC------------CHHHHHHHHHcC---CCEeCC
Confidence 35578888888 9999999984 347788888777 999955
No 167
>PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B ....
Probab=62.14 E-value=12 Score=35.00 Aligned_cols=39 Identities=13% Similarity=0.069 Sum_probs=31.5
Q ss_pred CCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCC
Q 005970 104 FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLK 144 (667)
Q Consensus 104 ~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~ 144 (667)
+..+.-.++...++.|+. ++|+||+..+++.++++|...
T Consensus 24 ~~~~Q~~~i~~QL~~GiR--~lDlrv~~~~~~~~~v~Hg~~ 62 (146)
T PF00388_consen 24 WSKTQSWSIREQLESGIR--YLDLRVWDGNDGELVVYHGIT 62 (146)
T ss_dssp HC-B-SHHHHHHHHTT----EEEEEEEEETTSSEEEEETTS
T ss_pred ccCcchHhHHHHHhccCc--eEEEEEEcCCCCceEEEeCCE
Confidence 356778899999999999 999999999999999999754
No 168
>PF03060 NMO: Nitronate monooxygenase; InterPro: IPR004136 2-Nitropropane dioxygenase (1.13.11.32 from EC) catalyses the oxidation of nitroalkanes into their corresponding carbonyl compounds and nitrite using eithr FAD or FMN as a cofactor []. This entry also includes fatty acid synthase subunit beta (2.3.1.86 from EC), which catalyses the formation of long- chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. The beta subunit contains domains for: [acyl-carrier protein] acetyltransferase and malonyltransferase, S-acyl fatty acid synthase thioesterase, enoyl-[acyl-carrier protein] reductase, and 3-hydroxypalmitoyl-[acyl-carrier protein] dehydratase. ; GO: 0018580 nitronate monooxygenase activity, 0055114 oxidation-reduction process; PDB: 2Z6I_B 2Z6J_B 3BW2_A 3BW3_A 3BW4_A 2GJL_A 2GJN_A 3BO9_A.
Probab=61.30 E-value=32 Score=36.88 Aligned_cols=86 Identities=14% Similarity=0.215 Sum_probs=50.1
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCC----------chhhhhhhhhcC
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLT----------PSAAVDCFAHLG 399 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~----------~~~~l~~~~~~~ 399 (667)
...++.+|+.|+.|++ +|. ...+.+++.+.| +|+||.--++- ...++......
T Consensus 126 ~~~i~~l~~~gi~v~~-~v~------------s~~~A~~a~~~G---~D~iv~qG~eAGGH~g~~~~~~~~L~~~v~~~- 188 (330)
T PF03060_consen 126 PEVIERLHAAGIKVIP-QVT------------SVREARKAAKAG---ADAIVAQGPEAGGHRGFEVGSTFSLLPQVRDA- 188 (330)
T ss_dssp HHHHHHHHHTT-EEEE-EES------------SHHHHHHHHHTT----SEEEEE-TTSSEE---SSG-HHHHHHHHHHH-
T ss_pred HHHHHHHHHcCCcccc-ccC------------CHHHHHHhhhcC---CCEEEEeccccCCCCCccccceeeHHHHHhhh-
Confidence 6799999999999886 553 347888999888 99999664432 11111111110
Q ss_pred cCcccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEccee
Q 005970 400 KNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (667)
Q Consensus 400 ~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~ 444 (667)
-.+-||+=-|- .+-.+..+|+.+|||+|-+.-+
T Consensus 189 ------~~iPViaAGGI------~dg~~iaaal~lGA~gV~~GTr 221 (330)
T PF03060_consen 189 ------VDIPVIAAGGI------ADGRGIAAALALGADGVQMGTR 221 (330)
T ss_dssp -------SS-EEEESS--------SHHHHHHHHHCT-SEEEESHH
T ss_pred ------cCCcEEEecCc------CCHHHHHHHHHcCCCEeecCCe
Confidence 01333443332 2345677899999999977655
No 169
>cd00945 Aldolase_Class_I Class I aldolases. The class I aldolases use an active-site lysine which stablilzes a reaction intermediates via Schiff base formation, and have TIM beta/alpha barrel fold. The members of this family include 2-keto-3-deoxy-6-phosphogluconate (KDPG) and 2-keto-4-hydroxyglutarate (KHG) aldolases, transaldolase, dihydrodipicolinate synthase sub-family, Type I 3-dehydroquinate dehydratase, DeoC and DhnA proteins, and metal-independent fructose-1,6-bisphosphate aldolase. Although structurally similar, the class II aldolases use a different mechanism and are believed to have an independent evolutionary origin.
Probab=59.66 E-value=20 Score=34.59 Aligned_cols=67 Identities=21% Similarity=0.127 Sum_probs=45.0
Q ss_pred HHHHHHHHhCCCcccceEecCCCCCchhhhhhhhhcCcCcccCCceeEEEecCCCCCC--CchhHHHHHHHHHCCCCeEE
Q 005970 363 LTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSANLLVISKNGASGDY--PSCTNLAYQKAISDGVDFID 440 (667)
Q Consensus 363 ~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~~~~iiaHRG~~~~~--PENTl~Af~~A~~~Gad~iE 440 (667)
....+.+++.| ||||+..- ++++..... ..+.++.++++-|+.... .+.++..-+.|.+.|||++.
T Consensus 16 ~~~~~~~~~~g---v~gi~~~g-----~~i~~~~~~----~~~~~~~v~~~v~~~~~~~~~~~~~~~a~~a~~~Gad~i~ 83 (201)
T cd00945 16 AKLCDEAIEYG---FAAVCVNP-----GYVRLAADA----LAGSDVPVIVVVGFPTGLTTTEVKVAEVEEAIDLGADEID 83 (201)
T ss_pred HHHHHHHHHhC---CcEEEECH-----HHHHHHHHH----hCCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEE
Confidence 34556777766 99999985 233222110 111145567777765533 79999999999999999998
Q ss_pred c
Q 005970 441 C 441 (667)
Q Consensus 441 ~ 441 (667)
+
T Consensus 84 v 84 (201)
T cd00945 84 V 84 (201)
T ss_pred E
Confidence 7
No 170
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=59.22 E-value=88 Score=33.94 Aligned_cols=30 Identities=17% Similarity=0.090 Sum_probs=22.4
Q ss_pred CchhHHHHHHHHHCCCCeEEcceeeecCCe
Q 005970 421 PSCTNLAYQKAISDGVDFIDCPVQMSKDGV 450 (667)
Q Consensus 421 PENTl~Af~~A~~~Gad~iE~DV~lTkDg~ 450 (667)
.+.+.+.-.+|+.+|||++=+-+|.|.|.-
T Consensus 285 sd~~~~~a~AAva~GAdGliIE~H~~pd~A 314 (352)
T PRK13396 285 SEYVPSMAMAAIAAGTDSLMIEVHPNPAKA 314 (352)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEecCCcccC
Confidence 344557788999999997777777776654
No 171
>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins. This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy
Probab=58.33 E-value=10 Score=40.50 Aligned_cols=40 Identities=10% Similarity=0.008 Sum_probs=32.6
Q ss_pred CchhHHHHHHHHHCCCCeEEcceeeecC--------------------CeEEEeccCccc
Q 005970 421 PSCTNLAYQKAISDGVDFIDCPVQMSKD--------------------GVPFCLSFINLI 460 (667)
Q Consensus 421 PENTl~Af~~A~~~Gad~iE~DV~lTkD--------------------g~~Vv~HD~~L~ 460 (667)
.+|+-.++..+++.|+..||+||+-..+ +-+-|+|-.+++
T Consensus 43 ~~~s~~~i~~QLd~GvR~LELDv~~d~~gg~~a~P~~~~~~~~~~~~~~g~~V~H~~~~d 102 (324)
T cd08589 43 LDYSHPPLADQLDSGVRQLELDVWADPEGGRYAHPLGLAPDDAAVMKKPGWKVSHIPDLD 102 (324)
T ss_pred ccCCCccHHHHHhhCcceEEEEEeecCCcccccccccccccccccccCCCeEEEcCCCcC
Confidence 4577889999999999999999997654 457778877763
No 172
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=56.33 E-value=1.2e+02 Score=32.64 Aligned_cols=26 Identities=15% Similarity=0.105 Sum_probs=19.9
Q ss_pred HHHHHHHHHCCCCeEEcceeeecCCe
Q 005970 425 NLAYQKAISDGVDFIDCPVQMSKDGV 450 (667)
Q Consensus 425 l~Af~~A~~~Gad~iE~DV~lTkDg~ 450 (667)
...-.+|+.+|||++=+.+|.|.|.-
T Consensus 280 ~~~a~AAvA~GAdGliIE~H~~pd~a 305 (335)
T PRK08673 280 EPLALAAVAAGADGLIVEVHPDPEKA 305 (335)
T ss_pred HHHHHHHHHhCCCEEEEEecCCcccC
Confidence 34567788999998877788877765
No 173
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=56.29 E-value=17 Score=35.36 Aligned_cols=58 Identities=19% Similarity=0.074 Sum_probs=38.5
Q ss_pred ChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhhhh
Q 005970 329 HTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDC 394 (667)
Q Consensus 329 ~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~~ 394 (667)
-++.++.+|++|..|++..- +.-..+.| ..-++.+.+.+ ++|||||=+|..+..+.+.
T Consensus 33 l~~~v~~~~~~gK~vfVHiD-----li~Gl~~D-~~~i~~L~~~~--~~dGIISTk~~~i~~Ak~~ 90 (175)
T PF04309_consen 33 LKDIVKRLKAAGKKVFVHID-----LIEGLSRD-EAGIEYLKEYG--KPDGIISTKSNLIKRAKKL 90 (175)
T ss_dssp HHHHHHHHHHTT-EEEEECC-----GEETB-SS-HHHHHHHHHTT----SEEEESSHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCEEEEEeh-----hcCCCCCC-HHHHHHHHHcC--CCcEEEeCCHHHHHHHHHc
Confidence 36799999999999999852 11122334 35567777654 5999999999887766643
No 174
>COG2070 Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]
Probab=54.43 E-value=30 Score=37.27 Aligned_cols=43 Identities=21% Similarity=0.242 Sum_probs=34.9
Q ss_pred CChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCC
Q 005970 328 PHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPL 386 (667)
Q Consensus 328 ~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~ 386 (667)
.+.++++.+|..|..|..-..+ ..+.+++.+.| +|+||..-++
T Consensus 115 ~~~~~i~~~~~~g~~v~~~v~~-------------~~~A~~~~~~G---~d~vI~~g~e 157 (336)
T COG2070 115 PPAEFVARLKAAGIKVIHSVIT-------------VREALKAERAG---ADAVIAQGAE 157 (336)
T ss_pred CcHHHHHHHHHcCCeEEEEeCC-------------HHHHHHHHhCC---CCEEEecCCc
Confidence 3678999999999998887764 25778888777 9999988763
No 175
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=53.01 E-value=14 Score=39.93 Aligned_cols=109 Identities=15% Similarity=0.033 Sum_probs=64.5
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhhhhhhhc------CcCcc
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHL------GKNAS 403 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~~~~~~------~~~~~ 403 (667)
.+.++.+|++|.++++=. |.-. ..... ..-...+..+.+.| ||+||-..|..+.-+.+....+ ..+..
T Consensus 52 ~e~i~~ah~~gkk~~V~~-N~~~-~~~~~-~~~~~~l~~l~e~G---vDaviv~Dpg~i~l~~e~~p~l~ih~S~q~~v~ 125 (347)
T COG0826 52 AEAVELAHSAGKKVYVAV-NTLL-HNDEL-ETLERYLDRLVELG---VDAVIVADPGLIMLARERGPDLPIHVSTQANVT 125 (347)
T ss_pred HHHHHHHHHcCCeEEEEe-cccc-ccchh-hHHHHHHHHHHHcC---CCEEEEcCHHHHHHHHHhCCCCcEEEeeeEecC
Confidence 568999999999987743 3210 00000 01134567777766 9999999999776666555222 11111
Q ss_pred cCCceeEEEecCCCC--CCCchhHHHHHHHHHCCCCeEEcceee
Q 005970 404 KSANLLVISKNGASG--DYPSCTNLAYQKAISDGVDFIDCPVQM 445 (667)
Q Consensus 404 ~~~~~~iiaHRG~~~--~~PENTl~Af~~A~~~Gad~iE~DV~l 445 (667)
+......-+-+|+.- ..+|||+.-..+..+.-.| +|+-|..
T Consensus 126 N~~~~~f~~~~G~~rvVl~rEls~~ei~~i~~~~~~-veiEvfV 168 (347)
T COG0826 126 NAETAKFWKELGAKRVVLPRELSLEEIKEIKEQTPD-VEIEVFV 168 (347)
T ss_pred CHHHHHHHHHcCCEEEEeCccCCHHHHHHHHHhCCC-ceEEEEE
Confidence 111222223345332 4789999999999987433 6665553
No 176
>PF13653 GDPD_2: Glycerophosphoryl diester phosphodiesterase family; PDB: 3RLG_A 2F9R_B 1XX1_A 3RLH_A.
Probab=49.85 E-value=13 Score=25.09 Aligned_cols=20 Identities=20% Similarity=0.170 Sum_probs=15.8
Q ss_pred hhHHHHHHHHHCCCCeEEcc
Q 005970 423 CTNLAYQKAISDGVDFIDCP 442 (667)
Q Consensus 423 NTl~Af~~A~~~Gad~iE~D 442 (667)
|+-.+++.++++|+|+|=.|
T Consensus 8 d~~~~~~~~l~~GVDgI~Td 27 (30)
T PF13653_consen 8 DKPASWRELLDLGVDGIMTD 27 (30)
T ss_dssp -SHHHHHHHHHHT-SEEEES
T ss_pred CCHHHHHHHHHcCCCEeeCC
Confidence 56789999999999999765
No 177
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=46.26 E-value=16 Score=38.06 Aligned_cols=122 Identities=16% Similarity=0.105 Sum_probs=63.2
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhh-hhhhhcCcCcccCCce
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAV-DCFAHLGKNASKSANL 408 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l-~~~~~~~~~~~~~~~~ 408 (667)
+++|+-++++|..|..|.-.+......++.....+.+..+-++| |.||=+|+-+.-.+.. +-+... ....-..+.
T Consensus 76 ~elv~Ya~~KgVgi~lw~~~~~~~~~~~~~~~~~~~f~~~~~~G---v~GvKidF~~~d~Q~~v~~y~~i-~~~AA~~~L 151 (273)
T PF10566_consen 76 PELVDYAKEKGVGIWLWYHSETGGNVANLEKQLDEAFKLYAKWG---VKGVKIDFMDRDDQEMVNWYEDI-LEDAAEYKL 151 (273)
T ss_dssp HHHHHHHHHTT-EEEEEEECCHTTBHHHHHCCHHHHHHHHHHCT---EEEEEEE--SSTSHHHHHHHHHH-HHHHHHTT-
T ss_pred HHHHHHHHHcCCCEEEEEeCCcchhhHhHHHHHHHHHHHHHHcC---CCEEeeCcCCCCCHHHHHHHHHH-HHHHHHcCc
Confidence 67999999999999999876431000001112356778888777 9999999988754432 111111 012223456
Q ss_pred eEEEecC-----CCCCCC-chhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCccccccc
Q 005970 409 LVISKNG-----ASGDYP-SCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTN 464 (667)
Q Consensus 409 ~iiaHRG-----~~~~~P-ENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~ 464 (667)
+|.-|-- -+-.|| .-|. .|+.+.|..-. +.++..--.|+.+|-=|-+
T Consensus 152 mvnfHg~~kPtG~~RTyPN~mT~--------EgVrG~E~~~~-~~~~~~~p~h~~~lPFTR~ 204 (273)
T PF10566_consen 152 MVNFHGATKPTGLRRTYPNLMTR--------EGVRGQEYNKW-SGDGGNPPEHNTTLPFTRM 204 (273)
T ss_dssp EEEETTS---TTHHHCSTTEEEE----------S--GGGGGT-T-TTS-HCCHHCTCCCTCC
T ss_pred EEEecCCcCCCcccccCccHHHH--------HHhhhhhhccc-ccCCCCCCcceeeccchhc
Confidence 7777743 222355 2222 35677777322 3455556677777643333
No 178
>COG1456 CdhE CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein) [Energy production and conversion]
Probab=45.16 E-value=1.4e+02 Score=32.21 Aligned_cols=39 Identities=26% Similarity=0.362 Sum_probs=27.4
Q ss_pred HHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cC-CcEEEEe
Q 005970 563 NSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TS-YELVYKV 607 (667)
Q Consensus 563 ~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~-~~~~~L~ 607 (667)
.+.++.+.++++ .+++.|||+++++..-+. .+ =|+.|-.
T Consensus 149 a~ave~v~~~~~------pv~l~s~dpevmkaaLev~~dqkPllYaA 189 (467)
T COG1456 149 AEAVEKVAEAGL------PVILCSFDPEVMKAALEVVKDQKPLLYAA 189 (467)
T ss_pred HHHHHHHHhcCC------cEEEEeCCHHHHHHHHHHhhccCceeeec
Confidence 344566667765 499999999999988777 44 4555543
No 179
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II. This oxidoreductase of the 2-nitropropane dioxygenase family (pfam03060) is commonly found in apparent operons with genes involved in fatty acid biosynthesis. Furthermore, this genomic context generally includes the fabG 3-oxoacyl-[ACP] reductase and lacks the fabI enoyl-[ACP] reductase.
Probab=44.98 E-value=1.3e+02 Score=32.02 Aligned_cols=87 Identities=14% Similarity=0.162 Sum_probs=55.5
Q ss_pred ChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCC--------chhhhhhhhhcCc
Q 005970 329 HTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLT--------PSAAVDCFAHLGK 400 (667)
Q Consensus 329 ~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~--------~~~~l~~~~~~~~ 400 (667)
+.++++++|+.|+.|++ +|.+ .++.+++.+.| +|+|+..-.+. ...++.+...
T Consensus 98 p~~~i~~lk~~g~~v~~-~v~s------------~~~a~~a~~~G---aD~Ivv~g~eagGh~g~~~~~~ll~~v~~--- 158 (307)
T TIGR03151 98 PGKYIPRLKENGVKVIP-VVAS------------VALAKRMEKAG---ADAVIAEGMESGGHIGELTTMALVPQVVD--- 158 (307)
T ss_pred cHHHHHHHHHcCCEEEE-EcCC------------HHHHHHHHHcC---CCEEEEECcccCCCCCCCcHHHHHHHHHH---
Confidence 45699999999999885 5532 35678888777 99999633211 1222222221
Q ss_pred CcccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEccee
Q 005970 401 NASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (667)
Q Consensus 401 ~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~ 444 (667)
.-..-||+-.|-.. -..+.+|+..|||+|-+.-+
T Consensus 159 ----~~~iPviaaGGI~~------~~~~~~al~~GA~gV~iGt~ 192 (307)
T TIGR03151 159 ----AVSIPVIAAGGIAD------GRGMAAAFALGAEAVQMGTR 192 (307)
T ss_pred ----HhCCCEEEECCCCC------HHHHHHHHHcCCCEeecchH
Confidence 01234677776542 44577888899999988764
No 180
>PRK07226 fructose-bisphosphate aldolase; Provisional
Probab=43.49 E-value=1.6e+02 Score=30.51 Aligned_cols=99 Identities=11% Similarity=0.095 Sum_probs=51.0
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHH-HHHHHhCCCcccceEecCCCCCchhhhhhhhhcCcCcccCCce
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTE-YLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSANL 408 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e-~~~li~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~~~ 408 (667)
..+++.+|+.|+.+.+|......-..-.+..+...+ .+...+.| +|.|=|.++... +.++..... ..-++
T Consensus 129 ~~v~~~~~~~g~pl~vi~~~~g~~~e~~~~~~~i~~a~~~a~e~G---AD~vKt~~~~~~-~~l~~~~~~-----~~ipV 199 (267)
T PRK07226 129 GEVAEECEEWGMPLLAMMYPRGPGIKNEYDPEVVAHAARVAAELG---ADIVKTNYTGDP-ESFREVVEG-----CPVPV 199 (267)
T ss_pred HHHHHHHHHcCCcEEEEEecCCCccCCCccHHHHHHHHHHHHHHC---CCEEeeCCCCCH-HHHHHHHHh-----CCCCE
Confidence 447788899999999986321100000111111122 34445555 999999987532 223222211 11222
Q ss_pred eEEEecCCCCCCCchhHHHHHHHHHCCCCeE
Q 005970 409 LVISKNGASGDYPSCTNLAYQKAISDGVDFI 439 (667)
Q Consensus 409 ~iiaHRG~~~~~PENTl~Af~~A~~~Gad~i 439 (667)
++=-|-+..-.|-.+.-...|++.||+++
T Consensus 200 --~a~GGi~~~~~~~~l~~v~~~~~aGA~Gi 228 (267)
T PRK07226 200 --VIAGGPKTDTDREFLEMVRDAMEAGAAGV 228 (267)
T ss_pred --EEEeCCCCCCHHHHHHHHHHHHHcCCcEE
Confidence 33334333233445556678889999865
No 181
>PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac). It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesise the 9-phosphate form, Neu5Ac-9-P, and utilise ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family []. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.; GO: 0016051 carbohydrate biosynthetic process; PDB: 3G8R_B 1XUU_A 1XUZ_A 3CM4_A 2ZDR_A 1VLI_A 2WQP_A.
Probab=41.07 E-value=1.4e+02 Score=30.66 Aligned_cols=137 Identities=14% Similarity=0.155 Sum_probs=66.0
Q ss_pred HHHHHHHHhhcCCceEec-CCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecCCCcc
Q 005970 238 RSFVLSVSRSVVVNYISS-PEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDY 316 (667)
Q Consensus 238 ~~~l~~~l~~~~~~~i~S-Fd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~ 316 (667)
...+.+..++.|+.+++| ||.+.+..+.+.. .+.. .+-+.+
T Consensus 58 ~~~L~~~~~~~gi~f~stpfd~~s~d~l~~~~----~~~~-KIaS~d--------------------------------- 99 (241)
T PF03102_consen 58 HKELFEYCKELGIDFFSTPFDEESVDFLEELG----VPAY-KIASGD--------------------------------- 99 (241)
T ss_dssp HHHHHHHHHHTT-EEEEEE-SHHHHHHHHHHT-----SEE-EE-GGG---------------------------------
T ss_pred HHHHHHHHHHcCCEEEECCCCHHHHHHHHHcC----CCEE-Eecccc---------------------------------
Confidence 356778888889986665 9999999997762 3433 221100
Q ss_pred ccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHH---HHH-hCCCcccceE----ecCCCCCc
Q 005970 317 IWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYL---SFI-DNGDFSVDGV----LSDFPLTP 388 (667)
Q Consensus 317 ~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~---~li-~~G~~gVDGI----iTD~P~~~ 388 (667)
..+..+++.+-+.|++|..-|=. ...+|+. ..+ +.| +.+-+ ++.||...
T Consensus 100 ----------l~n~~lL~~~A~tgkPvIlSTG~-----------stl~EI~~Av~~~~~~~--~~~l~llHC~s~YP~~~ 156 (241)
T PF03102_consen 100 ----------LTNLPLLEYIAKTGKPVILSTGM-----------STLEEIERAVEVLREAG--NEDLVLLHCVSSYPTPP 156 (241)
T ss_dssp ----------TT-HHHHHHHHTT-S-EEEE-TT-------------HHHHHHHHHHHHHHC--T--EEEEEE-SSSS--G
T ss_pred ----------ccCHHHHHHHHHhCCcEEEECCC-----------CCHHHHHHHHHHHHhcC--CCCEEEEecCCCCCCCh
Confidence 01245788888888888887732 1223332 333 333 23333 46777765
Q ss_pred hhhh-hhhhhcCcCcccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceee
Q 005970 389 SAAV-DCFAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQM 445 (667)
Q Consensus 389 ~~~l-~~~~~~~~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~l 445 (667)
..+- +....+. ..-+..| |.|.+-..++. +. .|+.+||..||-=+.+
T Consensus 157 e~~NL~~i~~L~-----~~f~~~v---G~SDHt~g~~~-~~-~AvalGA~vIEKHfTl 204 (241)
T PF03102_consen 157 EDVNLRVIPTLK-----ERFGVPV---GYSDHTDGIEA-PI-AAVALGARVIEKHFTL 204 (241)
T ss_dssp GG--TTHHHHHH-----HHSTSEE---EEEE-SSSSHH-HH-HHHHTT-SEEEEEB-S
T ss_pred HHcChHHHHHHH-----HhcCCCE---EeCCCCCCcHH-HH-HHHHcCCeEEEEEEEC
Confidence 4432 1111110 0011233 67777665433 33 7889999999975544
No 182
>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins. This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy
Probab=39.23 E-value=36 Score=36.38 Aligned_cols=28 Identities=21% Similarity=0.017 Sum_probs=24.5
Q ss_pred CccHHHHHHHHHHcCCCCcEEEeeeeEecC
Q 005970 105 PDSSSIAYSLTLITSAPSVILWCDVQLTKD 134 (667)
Q Consensus 105 pENTl~a~~~A~~~g~d~~~vE~Dv~lTkD 134 (667)
.+|+-..+..+++.|+. .+|+||+-..+
T Consensus 43 ~~~s~~~i~~QLd~GvR--~LELDv~~d~~ 70 (324)
T cd08589 43 LDYSHPPLADQLDSGVR--QLELDVWADPE 70 (324)
T ss_pred ccCCCccHHHHHhhCcc--eEEEEEeecCC
Confidence 35777899999999999 99999998665
No 183
>PRK13307 bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase; Provisional
Probab=37.95 E-value=3.6e+02 Score=29.74 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=26.9
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceE
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGV 380 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGI 380 (667)
...++.+++.|+++.+=.+|.+ ++.+.++.+ ..+ +|.|
T Consensus 266 ~~ai~~akk~GikvgVD~lnp~---------tp~e~i~~l-~~~---vD~V 303 (391)
T PRK13307 266 EKAIHEAQKTGIYSILDMLNVE---------DPVKLLESL-KVK---PDVV 303 (391)
T ss_pred HHHHHHHHHcCCEEEEEEcCCC---------CHHHHHHHh-hCC---CCEE
Confidence 4589999999999999777643 344555555 444 8866
No 184
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=37.39 E-value=3.9e+02 Score=27.66 Aligned_cols=129 Identities=15% Similarity=0.091 Sum_probs=62.5
Q ss_pred HHHHHhhcceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccce
Q 005970 300 LTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDG 379 (667)
Q Consensus 300 l~~i~~~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDG 379 (667)
++.+..|++.+.++. +++.+.++++.+-+.|..|..= +.++.+.. +.....+++...|+ =+-
T Consensus 86 ~~~vae~vDilQIgA----------rn~rn~~LL~a~g~t~kpV~lK---rG~~~t~~---e~l~aaeyi~~~Gn--~~v 147 (258)
T TIGR01362 86 CEPVAEVVDIIQIPA----------FLCRQTDLLVAAAKTGRIVNVK---KGQFLSPW---DMKNVVEKVLSTGN--KNI 147 (258)
T ss_pred HHHHHhhCcEEEeCc----------hhcchHHHHHHHhccCCeEEec---CCCcCCHH---HHHHHHHHHHHcCC--CcE
Confidence 455666666655432 2445677888888888877642 22221111 12233455555552 334
Q ss_pred EecCCCCCchhhhh---hhhhcCcCcccCCceeE--EEec----C----CCCCCCchhHHHHHHHHHCCCCeEEcceeee
Q 005970 380 VLSDFPLTPSAAVD---CFAHLGKNASKSANLLV--ISKN----G----ASGDYPSCTNLAYQKAISDGVDFIDCPVQMS 446 (667)
Q Consensus 380 IiTD~P~~~~~~l~---~~~~~~~~~~~~~~~~i--iaHR----G----~~~~~PENTl~Af~~A~~~Gad~iE~DV~lT 446 (667)
|.+.+=-.. .+-+ .+++..-.... .-|.| ..|- | .++-..|=-.+--++|+..|||++-+.||-.
T Consensus 148 iLcERG~tf-~y~r~~~D~~~ip~~k~~-~~PVi~DpSHsvq~pg~~g~~s~G~r~~v~~la~AAvA~GaDGl~iEvHpd 225 (258)
T TIGR01362 148 LLCERGTSF-GYNNLVVDMRSLPIMREL-GCPVIFDATHSVQQPGGLGGASGGLREFVPTLARAAVAVGIDGLFMETHPD 225 (258)
T ss_pred EEEeCCCCc-CCCCcccchhhhHHHHhc-CCCEEEeCCccccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 444443221 1110 11111000001 12322 3553 2 2233445555555778999999988887755
Q ss_pred cC
Q 005970 447 KD 448 (667)
Q Consensus 447 kD 448 (667)
.|
T Consensus 226 P~ 227 (258)
T TIGR01362 226 PK 227 (258)
T ss_pred cc
Confidence 44
No 185
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=36.42 E-value=3e+02 Score=28.68 Aligned_cols=35 Identities=17% Similarity=0.096 Sum_probs=22.6
Q ss_pred EEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecC
Q 005970 411 ISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKD 448 (667)
Q Consensus 411 iaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkD 448 (667)
..|-.++. +=-++-..+|+..|||+|.+-||--.|
T Consensus 221 pSH~~Grr---~lv~pla~AA~AaGAdglmiEVHp~P~ 255 (286)
T COG2876 221 PSHATGRR---DLVEPLAKAAIAAGADGLMIEVHPDPE 255 (286)
T ss_pred CCCcccch---hhHHHHHHHHHhccCCeeEEEecCCcc
Confidence 34544433 334466778899999888887775443
No 186
>cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins. This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity.
Probab=34.86 E-value=41 Score=35.01 Aligned_cols=37 Identities=14% Similarity=0.100 Sum_probs=30.0
Q ss_pred chhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcc
Q 005970 422 SCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINL 459 (667)
Q Consensus 422 ENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L 459 (667)
-|--.++..+++.|+.++|+||+.. ++.+.++|-...
T Consensus 41 ~nQ~~sI~~QL~~GvR~LdLdv~~~-~~~l~v~Hg~~~ 77 (267)
T cd08590 41 PNQELSITDQLDLGARFLELDVHWT-TGDLRLCHGGDH 77 (267)
T ss_pred cccCcCHHHHHhhCCcEEEEeeeeC-CCCEEEEccCcc
Confidence 4556788999999999999999975 577788886543
No 187
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=34.71 E-value=31 Score=36.77 Aligned_cols=18 Identities=11% Similarity=-0.088 Sum_probs=16.9
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 005970 645 TQLWRSTHITRELVLMEL 662 (667)
Q Consensus 645 ~~~v~~ah~~Gl~V~vWT 662 (667)
..+|++||++||+||+|.
T Consensus 73 ~~~I~eaHkrGlevHAW~ 90 (311)
T PF02638_consen 73 EFMIEEAHKRGLEVHAWF 90 (311)
T ss_pred HHHHHHHHHcCCEEEEEE
Confidence 479999999999999997
No 188
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=34.10 E-value=3e+02 Score=28.43 Aligned_cols=39 Identities=21% Similarity=0.117 Sum_probs=22.8
Q ss_pred eeEE--EecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCC
Q 005970 408 LLVI--SKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDG 449 (667)
Q Consensus 408 ~~ii--aHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg 449 (667)
|.|+ .|=++...+ -...-.+|+..|||++=+.+|.+.|.
T Consensus 186 PVivd~SHs~G~r~~---v~~~a~AAvA~GAdGl~IE~H~~P~~ 226 (250)
T PRK13397 186 PIIVDVSHSTGRRDL---LLPAAKIAKAVGANGIMMEVHPDPDH 226 (250)
T ss_pred CeEECCCCCCcccch---HHHHHHHHHHhCCCEEEEEecCCccc
Confidence 4444 575543222 23556778899999666556655553
No 189
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=33.85 E-value=3.7e+02 Score=27.87 Aligned_cols=86 Identities=6% Similarity=0.070 Sum_probs=48.5
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCC--------CcccceEecCCCCCchhhhhhhhhcCcC
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNG--------DFSVDGVLSDFPLTPSAAVDCFAHLGKN 401 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G--------~~gVDGIiTD~P~~~~~~l~~~~~~~~~ 401 (667)
.++.+.++++|+....-.--+ .+.+.++.+.+.. ..|+.|.-++.|..+..+++...+.
T Consensus 134 ~~~~~~~~~~gi~~I~lv~Pt----------T~~eri~~i~~~a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ir~~--- 200 (263)
T CHL00200 134 DYLISVCNLYNIELILLIAPT----------SSKSRIQKIARAAPGCIYLVSTTGVTGLKTELDKKLKKLIETIKKM--- 200 (263)
T ss_pred HHHHHHHHHcCCCEEEEECCC----------CCHHHHHHHHHhCCCcEEEEcCCCCCCCCccccHHHHHHHHHHHHh---
Confidence 568899999999754443221 1234444444332 2457777777777766666655421
Q ss_pred cccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCe
Q 005970 402 ASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDF 438 (667)
Q Consensus 402 ~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~ 438 (667)
...|+++ |..- ||..-.+++.+.|||+
T Consensus 201 ---t~~Pi~v---GFGI----~~~e~~~~~~~~GADG 227 (263)
T CHL00200 201 ---TNKPIIL---GFGI----STSEQIKQIKGWNING 227 (263)
T ss_pred ---cCCCEEE---ECCc----CCHHHHHHHHhcCCCE
Confidence 1345555 3222 3334456677888765
No 190
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=31.97 E-value=35 Score=36.36 Aligned_cols=18 Identities=39% Similarity=0.392 Sum_probs=16.5
Q ss_pred hHHHHHHHHcCCeEEEEe
Q 005970 330 TTIVLDAHKERLEVFASN 347 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WT 347 (667)
.-+|+.||++||+||+|.
T Consensus 73 ~~~I~eaHkrGlevHAW~ 90 (311)
T PF02638_consen 73 EFMIEEAHKRGLEVHAWF 90 (311)
T ss_pred HHHHHHHHHcCCEEEEEE
Confidence 458999999999999998
No 191
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase. IMPDH catalyzes the NAD-dependent oxidation of inosine 5'-monophosphate (IMP) to xanthosine 5' monophosphate (XMP). It is a rate-limiting step in the de novo synthesis of the guanine nucleotides. There is often a CBS domain inserted in the middle of this domain, which is proposed to play a regulatory role. IMPDH is a key enzyme in the regulation of cell proliferation and differentiation. It has been identified as an attractive target for developing chemotherapeutic agents.
Probab=31.68 E-value=2.9e+02 Score=29.55 Aligned_cols=86 Identities=26% Similarity=0.307 Sum_probs=51.7
Q ss_pred hHHHHHHHHcC--CeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecC-CCCC--------------chhhh
Q 005970 330 TTIVLDAHKER--LEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSD-FPLT--------------PSAAV 392 (667)
Q Consensus 330 ~~~v~~ah~~G--l~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD-~P~~--------------~~~~l 392 (667)
.++++.+++.+ +.|.+.++.+ .+..+.+++.| +|+|+.- -|.. +..+.
T Consensus 123 ~~~i~~ik~~~p~v~Vi~G~v~t------------~~~A~~l~~aG---aD~I~vg~g~G~~~~t~~~~g~g~p~~~~i~ 187 (325)
T cd00381 123 IEMIKFIKKKYPNVDVIAGNVVT------------AEAARDLIDAG---ADGVKVGIGPGSICTTRIVTGVGVPQATAVA 187 (325)
T ss_pred HHHHHHHHHHCCCceEEECCCCC------------HHHHHHHHhcC---CCEEEECCCCCcCcccceeCCCCCCHHHHHH
Confidence 45788899887 7888777743 46778889877 9999742 1211 00001
Q ss_pred hhhhhcCcCcccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEc
Q 005970 393 DCFAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDC 441 (667)
Q Consensus 393 ~~~~~~~~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~ 441 (667)
+.... ......-|||--|.. |-....+|+.+|||++=+
T Consensus 188 ~v~~~-----~~~~~vpVIA~GGI~------~~~di~kAla~GA~~Vmi 225 (325)
T cd00381 188 DVAAA-----ARDYGVPVIADGGIR------TSGDIVKALAAGADAVML 225 (325)
T ss_pred HHHHH-----HhhcCCcEEecCCCC------CHHHHHHHHHcCCCEEEe
Confidence 11100 011123466665543 346678889999999877
No 192
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=31.51 E-value=5.4e+02 Score=26.76 Aligned_cols=130 Identities=13% Similarity=0.071 Sum_probs=61.9
Q ss_pred HHHHHhhcceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccce
Q 005970 300 LTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDG 379 (667)
Q Consensus 300 l~~i~~~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDG 379 (667)
++.+..|++.+.++. +++.++++++.+-+.|..|..= +.++.+.. +.....++....| .=+.
T Consensus 94 ~~~v~~~~DilQIgA----------rn~rn~~LL~a~g~t~kpV~lK---rG~~~t~~---e~~~aaeyi~~~G--n~~v 155 (264)
T PRK05198 94 AAPVAEVVDVLQIPA----------FLCRQTDLLVAAAKTGKVVNIK---KGQFLAPW---DMKNVVDKVREAG--NDKI 155 (264)
T ss_pred HHHHHhhCcEEEECc----------hhcchHHHHHHHhccCCeEEec---CCCcCCHH---HHHHHHHHHHHcC--CCeE
Confidence 555666676655432 2445677888888888877542 22221111 1223335555555 2344
Q ss_pred EecCCCCCchhhhh---hhhhcCcCccc-CCceeEEEec--------CCCCCCCchhHHHHHHHHHCCCCeEEcceeeec
Q 005970 380 VLSDFPLTPSAAVD---CFAHLGKNASK-SANLLVISKN--------GASGDYPSCTNLAYQKAISDGVDFIDCPVQMSK 447 (667)
Q Consensus 380 IiTD~P~~~~~~l~---~~~~~~~~~~~-~~~~~iiaHR--------G~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTk 447 (667)
|.+.+=-.. .+-+ .++...-.... -+-+.-..|- |.++-..|=-.+--++|+..|||++-+.||-..
T Consensus 156 ilcERG~tf-~y~r~~~D~~~vp~~k~~~lPVi~DpSHsvq~pg~~~~~s~G~r~~v~~la~AAvA~GadGl~iEvHpdP 234 (264)
T PRK05198 156 ILCERGTSF-GYNNLVVDMRGLPIMRETGAPVIFDATHSVQLPGGQGGSSGGQREFVPVLARAAVAVGVAGLFIETHPDP 234 (264)
T ss_pred EEEeCCCCc-CCCCeeechhhhHHHhhCCCCEEEeCCccccCCCCCCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeCCCc
Confidence 445543321 1110 11111000011 1112223553 223334554445556889999998888877544
Q ss_pred C
Q 005970 448 D 448 (667)
Q Consensus 448 D 448 (667)
|
T Consensus 235 ~ 235 (264)
T PRK05198 235 D 235 (264)
T ss_pred c
Confidence 4
No 193
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=30.68 E-value=6.3e+02 Score=26.23 Aligned_cols=38 Identities=16% Similarity=0.013 Sum_probs=26.1
Q ss_pred EEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeE
Q 005970 411 ISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVP 451 (667)
Q Consensus 411 iaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~ 451 (667)
..|-.+ ..|-....-.+|+.+||||+-+-+|.|.|.-+
T Consensus 203 ~sHs~G---~~~~v~~~~~aAva~Ga~Gl~iE~H~~pd~a~ 240 (266)
T PRK13398 203 PSHATG---RRELVIPMAKAAIAAGADGLMIEVHPEPEKAL 240 (266)
T ss_pred CCCccc---chhhHHHHHHHHHHcCCCEEEEeccCCccccC
Confidence 367543 23445677788999999977777777777653
No 194
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.
Probab=30.54 E-value=2.3e+02 Score=27.77 Aligned_cols=42 Identities=19% Similarity=0.090 Sum_probs=31.3
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecC
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSD 383 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD 383 (667)
.++++.++++|+++++-..+.. ++.++.+.+.+.| +|.|..+
T Consensus 92 ~~~i~~~~~~g~~~~~~~~~~~---------t~~~~~~~~~~~g---~d~v~~~ 133 (206)
T TIGR03128 92 KGAVKAAKKHGKEVQVDLINVK---------DKVKRAKELKELG---ADYIGVH 133 (206)
T ss_pred HHHHHHHHHcCCEEEEEecCCC---------ChHHHHHHHHHcC---CCEEEEc
Confidence 5689999999999998544432 3446777777666 9988875
No 195
>PF11814 DUF3335: Peptidase_C39 like family; InterPro: IPR021770 This family of proteins are functionally uncharacterised. This family is only found in bacteria. This presumed domain is typically between 226 to 230 amino acids in length.
Probab=29.80 E-value=3.8e+02 Score=26.83 Aligned_cols=23 Identities=13% Similarity=0.050 Sum_probs=18.7
Q ss_pred ChHHHHHHHHcCCeEEEEeccCC
Q 005970 329 HTTIVLDAHKERLEVFASNFAND 351 (667)
Q Consensus 329 ~~~~v~~ah~~Gl~V~~WTvn~~ 351 (667)
+-.+.-.|+++|++|-+|+-++.
T Consensus 56 P~GLAlAA~rrG~~vev~~~~~~ 78 (207)
T PF11814_consen 56 PFGLALAAARRGFKVEVWVSTDG 78 (207)
T ss_pred hHHHHHHHHHcCCceEEEECCCC
Confidence 45688899999999999986554
No 196
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=29.52 E-value=7.4e+02 Score=26.65 Aligned_cols=30 Identities=7% Similarity=0.040 Sum_probs=22.9
Q ss_pred HHHHHHHHhhcCCceEec-CCHHHHHHHHhh
Q 005970 238 RSFVLSVSRSVVVNYISS-PEVNFLRSIAAR 267 (667)
Q Consensus 238 ~~~l~~~l~~~~~~~i~S-Fd~~~L~~l~~~ 267 (667)
...+.+.-++.|+.+++| ||...+..+.+.
T Consensus 78 ~~~L~~~~~~~Gi~~~stpfd~~svd~l~~~ 108 (329)
T TIGR03569 78 HRELKEYCESKGIEFLSTPFDLESADFLEDL 108 (329)
T ss_pred HHHHHHHHHHhCCcEEEEeCCHHHHHHHHhc
Confidence 345677777888886665 899999888775
No 197
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=28.72 E-value=4.4e+02 Score=28.59 Aligned_cols=74 Identities=16% Similarity=0.240 Sum_probs=47.8
Q ss_pred ccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCc
Q 005970 524 FMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYE 602 (667)
Q Consensus 524 iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~ 602 (667)
..-|+|..+.+.+.+.++-+.+++=. .. ...+.....++.+.+.|.+ .++++ |+.++..+++. |+++
T Consensus 48 ~~~l~e~i~~ah~~gkk~~V~~N~~~--~~---~~~~~~~~~l~~l~e~GvD-----aviv~--Dpg~i~l~~e~~p~l~ 115 (347)
T COG0826 48 VEDLAEAVELAHSAGKKVYVAVNTLL--HN---DELETLERYLDRLVELGVD-----AVIVA--DPGLIMLARERGPDLP 115 (347)
T ss_pred HHHHHHHHHHHHHcCCeEEEEecccc--cc---chhhHHHHHHHHHHHcCCC-----EEEEc--CHHHHHHHHHhCCCCc
Confidence 34478888888887543233333321 10 1112235556666666664 78887 99999999999 9999
Q ss_pred EEEEecc
Q 005970 603 LVYKVKE 609 (667)
Q Consensus 603 ~~~L~~~ 609 (667)
+.+-+..
T Consensus 116 ih~S~q~ 122 (347)
T COG0826 116 IHVSTQA 122 (347)
T ss_pred EEEeeeE
Confidence 9877654
No 198
>PRK08649 inosine 5-monophosphate dehydrogenase; Validated
Probab=27.83 E-value=1.7e+02 Score=31.92 Aligned_cols=79 Identities=16% Similarity=0.127 Sum_probs=47.2
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCC-------------CCCchhhhhhhh
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDF-------------PLTPSAAVDCFA 396 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~-------------P~~~~~~l~~~~ 396 (667)
.++++.+++.|+.|-++.- +. +..+..+.+++.| ||.|+++- |..+.+.++..
T Consensus 121 ~~iv~~~~~~~V~v~vr~~-~~---------~~~e~a~~l~eaG---vd~I~vhgrt~~~~h~~~~~~~~~i~~~ik~~- 186 (368)
T PRK08649 121 TERIAEIRDAGVIVAVSLS-PQ---------RAQELAPTVVEAG---VDLFVIQGTVVSAEHVSKEGEPLNLKEFIYEL- 186 (368)
T ss_pred HHHHHHHHhCeEEEEEecC-Cc---------CHHHHHHHHHHCC---CCEEEEeccchhhhccCCcCCHHHHHHHHHHC-
Confidence 3478888888766655541 11 3446677788777 99999853 22222222211
Q ss_pred hcCcCcccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeE
Q 005970 397 HLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFI 439 (667)
Q Consensus 397 ~~~~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~i 439 (667)
...||+ |.- -|....+++++.|||+|
T Consensus 187 ----------~ipVIa--G~V-----~t~e~A~~l~~aGAD~V 212 (368)
T PRK08649 187 ----------DVPVIV--GGC-----VTYTTALHLMRTGAAGV 212 (368)
T ss_pred ----------CCCEEE--eCC-----CCHHHHHHHHHcCCCEE
Confidence 233455 432 24557788888999998
No 199
>cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins. This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X
Probab=27.69 E-value=52 Score=33.74 Aligned_cols=39 Identities=21% Similarity=0.370 Sum_probs=32.4
Q ss_pred chhHHHHHHHHHCCCCeEEcceeeec-CCeEEEeccCccc
Q 005970 422 SCTNLAYQKAISDGVDFIDCPVQMSK-DGVPFCLSFINLI 460 (667)
Q Consensus 422 ENTl~Af~~A~~~Gad~iE~DV~lTk-Dg~~Vv~HD~~L~ 460 (667)
.|--.++...++.|+.++|+||+... ++.+.++|.....
T Consensus 37 ~~Q~~~i~~QL~~GiR~~dlr~~~~~~~~~~~~~H~~~~~ 76 (271)
T cd08557 37 KTQDLSITDQLDAGVRYLDLRVAYDPDDGDLYVCHGLFLL 76 (271)
T ss_pred hccCCCHHHHHhcCceEEEEEeeeecCCCcEEEEcccccc
Confidence 34445778899999999999999877 6899999987664
No 200
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=27.44 E-value=4.4e+02 Score=25.49 Aligned_cols=41 Identities=27% Similarity=0.264 Sum_probs=27.4
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecC
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSD 383 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD 383 (667)
.++++.++++|+++.+=.++-. ++ .+..++...| +|.|...
T Consensus 93 ~~~i~~~~~~g~~~~v~~~~~~---------t~-~e~~~~~~~~---~d~v~~~ 133 (202)
T cd04726 93 KKAVKAAKKYGKEVQVDLIGVE---------DP-EKRAKLLKLG---VDIVILH 133 (202)
T ss_pred HHHHHHHHHcCCeEEEEEeCCC---------CH-HHHHHHHHCC---CCEEEEc
Confidence 4689999999999987433221 22 4444567666 9988763
No 201
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=26.42 E-value=5.8e+02 Score=26.47 Aligned_cols=123 Identities=14% Similarity=0.034 Sum_probs=56.9
Q ss_pred ccCHHHHHHHHHhcCCcceE-EEEeecchhhhhhhcccHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhccCCc
Q 005970 524 FMKLSDFLEMAKNANSLSGV-LISIENAVYLAEKQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREKTSYE 602 (667)
Q Consensus 524 iPtL~EvL~~~~~~~~~~~l-~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~p~~~ 602 (667)
-|+++..++.+...... |. .|||=-|-.+.-..|..+.++-...| +.|+.-. . -.+.++++|+.+++|
T Consensus 25 ~P~~~~~~~~~~~l~~~-Gad~iElGiPfSDP~aDGpvIq~a~~rAL-~~g~~~~---~------~~~~~~~~r~~~~~p 93 (263)
T CHL00200 25 DPDIVITKKALKILDKK-GADIIELGIPYSDPLADGPIIQEASNRAL-KQGINLN---K------ILSILSEVNGEIKAP 93 (263)
T ss_pred CCCHHHHHHHHHHHHHC-CCCEEEECCCCCCCCccCHHHHHHHHHHH-HcCCCHH---H------HHHHHHHHhcCCCCC
Confidence 47777776655532110 22 68887543221113333444444444 3344310 1 234556666446777
Q ss_pred EEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCCccHHHHHHHHHcCCcEE
Q 005970 603 LVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTSSQTQLWRSTHITRELVL 659 (667)
Q Consensus 603 ~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~~~~~~v~~ah~~Gl~V~ 659 (667)
++++.-.+ ..-.-+++...+.|...|++..+.|.-......++.+.+++.|+...
T Consensus 94 ~vlm~Y~N--~i~~~G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I 148 (263)
T CHL00200 94 IVIFTYYN--PVLHYGINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELI 148 (263)
T ss_pred EEEEeccc--HHHHhCHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEE
Confidence 76544321 11111233333334445666444442222234466777777777644
No 202
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=25.93 E-value=7.9e+02 Score=25.80 Aligned_cols=31 Identities=10% Similarity=-0.040 Sum_probs=20.0
Q ss_pred CCCCchhHHHHHHHHHCCCCeEEcceeeecC
Q 005970 418 GDYPSCTNLAYQKAISDGVDFIDCPVQMSKD 448 (667)
Q Consensus 418 ~~~PENTl~Af~~A~~~Gad~iE~DV~lTkD 448 (667)
+-..|=-..=-++|+..|||++-+.||...|
T Consensus 213 ~G~re~v~~larAAvA~GaDGl~iEvHpdP~ 243 (281)
T PRK12457 213 GGRRRQVLDLARAGMAVGLAGLFLEAHPDPD 243 (281)
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEEecCCcc
Confidence 3344444444577889999988877665443
No 203
>PLN02591 tryptophan synthase
Probab=25.87 E-value=6.2e+02 Score=26.06 Aligned_cols=124 Identities=13% Similarity=0.038 Sum_probs=58.5
Q ss_pred ccCHHHHHHHHHhcCCcceE-EEEeecchhhhhhhcccHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhccCCc
Q 005970 524 FMKLSDFLEMAKNANSLSGV-LISIENAVYLAEKQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREKTSYE 602 (667)
Q Consensus 524 iPtL~EvL~~~~~~~~~~~l-~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~p~~~ 602 (667)
-|.++..++.+...... +. .|||=-|-.+.-..|..+.++-...|+ .|+.- ++ -.+.++.+|+.+++|
T Consensus 12 ~P~~e~~~~~~~~l~~~-Gad~iElGiPfSDP~aDGpvIq~a~~rAL~-~G~~~---~~------~~~~~~~~r~~~~~p 80 (250)
T PLN02591 12 DPDLDTTAEALRLLDAC-GADVIELGVPYSDPLADGPVIQAAATRALE-KGTTL---DS------VISMLKEVAPQLSCP 80 (250)
T ss_pred CCCHHHHHHHHHHHHHC-CCCEEEECCCCCCCcccCHHHHHHHHHHHH-cCCCH---HH------HHHHHHHHhcCCCCC
Confidence 47777666655532110 23 688875432211123333344344443 23331 01 134555555336677
Q ss_pred EEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCCccHHHHHHHHHcCCcEEE
Q 005970 603 LVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTSSQTQLWRSTHITRELVLM 660 (667)
Q Consensus 603 ~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~~~~~~v~~ah~~Gl~V~v 660 (667)
++++.-.+ ..-.-++++..+.|...|++..+.|.=.+....++.+.+++.|+....
T Consensus 81 ~ilm~Y~N--~i~~~G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~ 136 (250)
T PLN02591 81 IVLFTYYN--PILKRGIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVL 136 (250)
T ss_pred EEEEeccc--HHHHhHHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 66554322 111123334444445556665555532223345677777787777554
No 204
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=25.40 E-value=1.5e+02 Score=32.61 Aligned_cols=165 Identities=17% Similarity=0.124 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecCCCccccccCCCCCCCCChHHHHHHH
Q 005970 258 VNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAH 337 (667)
Q Consensus 258 ~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah 337 (667)
|+-|+++++..+ ++++-.++=+.+.+.. ..|.+-. ++....-+..-+.....++..-.+.+.+ ..-++.++
T Consensus 65 WeRLr~lk~~~~--nT~LQMLlRGQNlvGY---rhyaDDv--Ve~Fv~ka~~nGidvfRiFDAlND~RNl--~~ai~a~k 135 (472)
T COG5016 65 WERLRELKKAVP--NTKLQMLLRGQNLVGY---RHYADDV--VEKFVEKAAENGIDVFRIFDALNDVRNL--KTAIKAAK 135 (472)
T ss_pred HHHHHHHHHhCC--CcHHHHHHccCccccc---cCCchHH--HHHHHHHHHhcCCcEEEechhccchhHH--HHHHHHHH
Q ss_pred HcCCeEEEEeccCC-CCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhhhhhhhcCcCcccCCceeEEEecCC
Q 005970 338 KERLEVFASNFAND-IPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSANLLVISKNGA 416 (667)
Q Consensus 338 ~~Gl~V~~WTvn~~-~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~~~~iiaHRG~ 416 (667)
+.|..+..-+.=.- ......|+- +-.+++.++| ||.|+--.-.=++.-..++.-...-...-+-++..-----
T Consensus 136 k~G~h~q~~i~YT~sPvHt~e~yv---~~akel~~~g---~DSIciKDmaGlltP~~ayelVk~iK~~~~~pv~lHtH~T 209 (472)
T COG5016 136 KHGAHVQGTISYTTSPVHTLEYYV---ELAKELLEMG---VDSICIKDMAGLLTPYEAYELVKAIKKELPVPVELHTHAT 209 (472)
T ss_pred hcCceeEEEEEeccCCcccHHHHH---HHHHHHHHcC---CCEEEeecccccCChHHHHHHHHHHHHhcCCeeEEecccc
Q ss_pred CCCCCchhHHHHHHHHHCCCCeEEc
Q 005970 417 SGDYPSCTNLAYQKAISDGVDFIDC 441 (667)
Q Consensus 417 ~~~~PENTl~Af~~A~~~Gad~iE~ 441 (667)
+|.++ +++.+|+++|+|+|.+
T Consensus 210 sG~a~----m~ylkAvEAGvD~iDT 230 (472)
T COG5016 210 SGMAE----MTYLKAVEAGVDGIDT 230 (472)
T ss_pred cchHH----HHHHHHHHhCcchhhh
No 205
>PRK14040 oxaloacetate decarboxylase; Provisional
Probab=25.23 E-value=4.6e+02 Score=30.69 Aligned_cols=78 Identities=8% Similarity=-0.020 Sum_probs=44.2
Q ss_pred CHHHHHHHHhc-cCCcEEEEecc----chhhhhHHHHHHHHHhhhhcCCC--eeEEeCCCCCccHHHHHHHHHcCCcE--
Q 005970 588 DSSVLMKLREK-TSYELVYKVKE----NIRDALNQTIEDIKKFADSVVLT--MSLYLKRGTSSQTQLWRSTHITRELV-- 658 (667)
Q Consensus 588 d~~~L~~~~~~-p~~~~~~L~~~----~~~~~~~~~l~~~~~~a~~i~~~--~~i~~~~~~~~~~~~v~~ah~~Gl~V-- 658 (667)
+|+.|+.+++. |+.++..|.-+ .|..+.....+...+.+...|++ ....+.+++......++.++++|+.+
T Consensus 63 p~e~lr~l~~~~~~~~lqml~Rg~n~vg~~~ypddvv~~~v~~a~~~Gid~~rifd~lnd~~~~~~ai~~ak~~G~~~~~ 142 (593)
T PRK14040 63 PWERLRELKKAMPNTPQQMLLRGQNLLGYRHYADDVVERFVERAVKNGMDVFRVFDAMNDPRNLETALKAVRKVGAHAQG 142 (593)
T ss_pred HHHHHHHHHHhCCCCeEEEEecCcceeccccCcHHHHHHHHHHHHhcCCCEEEEeeeCCcHHHHHHHHHHHHHcCCeEEE
Confidence 68899999998 99888766643 12222222333323333333554 22233333333346888999999974
Q ss_pred -EEEeccC
Q 005970 659 -LMELLQN 665 (667)
Q Consensus 659 -~vWTVn~ 665 (667)
..+|...
T Consensus 143 ~i~yt~~p 150 (593)
T PRK14040 143 TLSYTTSP 150 (593)
T ss_pred EEEEeeCC
Confidence 4566544
No 206
>cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG).
Probab=25.07 E-value=55 Score=34.16 Aligned_cols=49 Identities=12% Similarity=0.072 Sum_probs=36.2
Q ss_pred eeEEEecCCCC-----CCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccC
Q 005970 408 LLVISKNGASG-----DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFI 457 (667)
Q Consensus 408 ~~iiaHRG~~~-----~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~ 457 (667)
..+-+|--+.. ...-|--.++...++.|+.++++||+.. |+.+.++|..
T Consensus 16 t~~gtHNS~~~~~~~~~~~~nQ~~si~~QL~~GiR~l~ld~~~~-~~~~~lcH~~ 69 (270)
T cd08588 16 TFLTTHNSFANSEDAFFLAPNQEDDITKQLDDGVRGLMLDIHDA-NGGLRLCHSV 69 (270)
T ss_pred eeEEeccCccccCCCcccccccCCCHHHHHHhCcceEeeeEEec-CCCEEEECCC
Confidence 34555654321 2345666788999999999999999985 7789999964
No 207
>PRK14864 putative biofilm stress and motility protein A; Provisional
Probab=24.82 E-value=3.2e+02 Score=24.22 Aligned_cols=11 Identities=9% Similarity=-0.064 Sum_probs=8.3
Q ss_pred HHHHHcCCCCcEE
Q 005970 113 SLTLITSAPSVIL 125 (667)
Q Consensus 113 ~~A~~~g~d~~~v 125 (667)
++|-+.||. +.
T Consensus 71 ~KAda~GA~--yY 81 (104)
T PRK14864 71 AKANAAGAD--YY 81 (104)
T ss_pred HHHHHcCCC--EE
Confidence 467789998 65
No 208
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=24.67 E-value=69 Score=38.37 Aligned_cols=37 Identities=19% Similarity=0.162 Sum_probs=33.5
Q ss_pred cHHHHHHHHHHcCCCCcEEEeeeeE--ecCCeEEEccCCCC
Q 005970 107 SSSIAYSLTLITSAPSVILWCDVQL--TKDEAGICFPDLKL 145 (667)
Q Consensus 107 NTl~a~~~A~~~g~d~~~vE~Dv~l--TkDg~~vv~HD~~l 145 (667)
-+.+-|++++-.|+. .||+|++- ++|+.||+.|-.+.
T Consensus 342 sSvEmYRQvLLsGcR--CVELDcWdgk~~d~EPvITHG~tm 380 (1189)
T KOG1265|consen 342 SSVEMYRQVLLSGCR--CVELDCWDGKGEDEEPVITHGFTM 380 (1189)
T ss_pred chHHHHHHHHHhcCc--eEEeeeecCCCCCCCceeecccch
Confidence 389999999999999 99999995 67889999999975
No 209
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=24.67 E-value=1.1e+02 Score=31.46 Aligned_cols=51 Identities=12% Similarity=0.094 Sum_probs=34.1
Q ss_pred CCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHH-HhCCCcccceEecCCCCC
Q 005970 327 LPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSF-IDNGDFSVDGVLSDFPLT 387 (667)
Q Consensus 327 ~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~l-i~~G~~gVDGIiTD~P~~ 387 (667)
..+.++++.+|+.|++|.+|+...- ..+. .+.++++ .+.| |||+-+|.-+-
T Consensus 66 pdp~~~i~~l~~~g~~~~~~~~P~v----~~w~---~~~~~~~~~~~G---vdg~w~D~~E~ 117 (265)
T cd06589 66 PNPKSMIDELHDNGVKLVLWIDPYI----REWW---AEVVKKLLVSLG---VDGFWTDMGEP 117 (265)
T ss_pred CCHHHHHHHHHHCCCEEEEEeChhH----HHHH---HHHHHHhhccCC---CCEEeccCCCC
Confidence 3467899999999999999985321 0111 1234444 5445 99999997553
No 210
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=24.65 E-value=5.8e+02 Score=28.89 Aligned_cols=160 Identities=17% Similarity=0.187 Sum_probs=0.0
Q ss_pred CHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecCCCccccccCCCCCCCCChHHHHHH
Q 005970 257 EVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDA 336 (667)
Q Consensus 257 d~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~a 336 (667)
+++-|+.+++.. | ++++..++-+.+.+.. ..|.+-....---.....|+....-.-...+.++ -...++.+
T Consensus 71 pwerlr~~r~~~-~-nt~lqmLlRG~n~vgy---~~ypddvv~~fv~~a~~~Gidi~Rifd~lnd~~n----~~~ai~~a 141 (468)
T PRK12581 71 PWERLRTLKKGL-P-NTRLQMLLRGQNLLGY---RHYADDIVDKFISLSAQNGIDVFRIFDALNDPRN----IQQALRAV 141 (468)
T ss_pred HHHHHHHHHHhC-C-CCceeeeeccccccCc---cCCcchHHHHHHHHHHHCCCCEEEEcccCCCHHH----HHHHHHHH
Q ss_pred HHcCCe---EEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCC------CCCchhhhhhhhhcCcCcccCCc
Q 005970 337 HKERLE---VFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDF------PLTPSAAVDCFAHLGKNASKSAN 407 (667)
Q Consensus 337 h~~Gl~---V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~------P~~~~~~l~~~~~~~~~~~~~~~ 407 (667)
++.|.. ..++|....-...|-. +..+.+.++| +|.|.-=. |..+...++... ....-+
T Consensus 142 k~~G~~~~~~i~yt~sp~~t~~y~~-----~~a~~l~~~G---ad~I~IkDtaG~l~P~~v~~Lv~alk-----~~~~~p 208 (468)
T PRK12581 142 KKTGKEAQLCIAYTTSPVHTLNYYL-----SLVKELVEMG---ADSICIKDMAGILTPKAAKELVSGIK-----AMTNLP 208 (468)
T ss_pred HHcCCEEEEEEEEEeCCcCcHHHHH-----HHHHHHHHcC---CCEEEECCCCCCcCHHHHHHHHHHHH-----hccCCe
Q ss_pred eeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcce
Q 005970 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPV 443 (667)
Q Consensus 408 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV 443 (667)
.-+-+| .-....++...+|+++|||.|++-+
T Consensus 209 i~~H~H-----nt~GlA~An~laAieAGad~vD~ai 239 (468)
T PRK12581 209 LIVHTH-----ATSGISQMTYLAAVEAGADRIDTAL 239 (468)
T ss_pred EEEEeC-----CCCccHHHHHHHHHHcCCCEEEeec
No 211
>PRK05848 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=24.61 E-value=3.6e+02 Score=28.20 Aligned_cols=84 Identities=19% Similarity=0.195 Sum_probs=49.7
Q ss_pred hHHHHHHHHc---CCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhhhhhhhcCcCcccCC
Q 005970 330 TTIVLDAHKE---RLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSA 406 (667)
Q Consensus 330 ~~~v~~ah~~---Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~ 406 (667)
...++.+++. ..+|.+-. +..+|....++.| +|.|.-|.++. ..+.+..... ....+
T Consensus 169 ~~~v~~~k~~~p~~~~I~VEv-------------~tleea~~A~~~G---aDiI~LDn~~~-e~l~~~v~~~---~~~~~ 228 (273)
T PRK05848 169 KEFIQHARKNIPFTAKIEIEC-------------ESLEEAKNAMNAG---ADIVMCDNMSV-EEIKEVVAYR---NANYP 228 (273)
T ss_pred HHHHHHHHHhCCCCceEEEEe-------------CCHHHHHHHHHcC---CCEEEECCCCH-HHHHHHHHHh---hccCC
Confidence 4578888775 35566643 3457888889877 99999999753 2222222111 11123
Q ss_pred ceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEE
Q 005970 407 NLLVISKNGASGDYPSCTNLAYQKAISDGVDFID 440 (667)
Q Consensus 407 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE 440 (667)
++.+.+--| .-++++.+| ++.|+|+|=
T Consensus 229 ~~~ieAsGg----It~~ni~~y---a~~GvD~Is 255 (273)
T PRK05848 229 HVLLEASGN----ITLENINAY---AKSGVDAIS 255 (273)
T ss_pred CeEEEEECC----CCHHHHHHH---HHcCCCEEE
Confidence 456666433 344455544 778998874
No 212
>PRK10302 hypothetical protein; Provisional
Probab=24.46 E-value=1.4e+02 Score=31.31 Aligned_cols=74 Identities=16% Similarity=0.229 Sum_probs=49.2
Q ss_pred cccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHHHHHhcCCCCCCCceEEEEeC-------CHHHHHHH
Q 005970 523 KFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVMEALGNAGYNKQTALKVMIQST-------DSSVLMKL 595 (667)
Q Consensus 523 ~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~v~i~SF-------d~~~L~~~ 595 (667)
.+..|+++|+.++.. ..+-+|+.++++.. .....+.+.++|+++|+. .|++-|- +.+.++..
T Consensus 110 ~~~~l~~fl~~l~~~---~~~AvEfRh~sW~~---~~~~~~~l~~lL~~~~~~-----~v~~D~~~~~~~~~~~~~~~da 178 (272)
T PRK10302 110 ELPALWQFLDALPAG---FTYGVEVRHPEFFA---KGEAEQALNRGLHQRGVN-----RVILDSRPVHAARPHSEAIRDA 178 (272)
T ss_pred cHHHHHHHHHhCCCC---CCEEEEccCHHHcC---CchhHHHHHHHHHHcCCE-----EEecCccccccCCCCcHHHHHH
Confidence 466777778877653 36899999999853 123555677899998764 5555442 33566777
Q ss_pred Hhc-cCCcEEEEe
Q 005970 596 REK-TSYELVYKV 607 (667)
Q Consensus 596 ~~~-p~~~~~~L~ 607 (667)
+.. |.+|....+
T Consensus 179 q~~~~~~P~~~~~ 191 (272)
T PRK10302 179 QRKKPKVPVHAVV 191 (272)
T ss_pred hhcCCCCCCCeec
Confidence 766 777765443
No 213
>PF06673 L_lactis_ph-MCP: Lactococcus lactis bacteriophage major capsid protein; InterPro: IPR009559 This family consists of several Lactococcus lactis bacteriophage major capsid proteins.
Probab=23.88 E-value=78 Score=31.03 Aligned_cols=47 Identities=23% Similarity=0.106 Sum_probs=37.4
Q ss_pred cCCCCCCCchhHHHH-HHHHHCCCCeEEcceeeecCCeEEEeccCccc
Q 005970 414 NGASGDYPSCTNLAY-QKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (667)
Q Consensus 414 RG~~~~~PENTl~Af-~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~ 460 (667)
.|..|++.=|-++.- +-|...||--+|.-|++-||.+.|-.||..+.
T Consensus 255 kgsdgharfnelatkaqiaqsfgavnletrvwmpkdevavynhdeyvl 302 (347)
T PF06673_consen 255 KGSDGHARFNELATKAQIAQSFGAVNLETRVWMPKDEVAVYNHDEYVL 302 (347)
T ss_pred cCCcchhHHHHHHHHHHHHHhcCccceeeeeeccccceeeecccceEE
Confidence 355667777777654 34556899999999999999999999998864
No 214
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed
Probab=23.85 E-value=8.1e+02 Score=25.21 Aligned_cols=136 Identities=13% Similarity=0.075 Sum_probs=75.9
Q ss_pred CHHHHHHhhCCCceEEeccCchhhh---hcCCcHHHHHHHHHhhcCCceEec--------CCHHHHHHHHhhhCCCCCce
Q 005970 207 TVQDMARQIKPPGLWLNIQHDAFYA---QHNLSMRSFVLSVSRSVVVNYISS--------PEVNFLRSIAARFRPSMTKL 275 (667)
Q Consensus 207 tL~e~l~~~~~~~~~ieiK~~~~~~---~~~~~~~~~l~~~l~~~~~~~i~S--------Fd~~~L~~l~~~~~~~~~~~ 275 (667)
.|.+.|. ..+..+.-|+|...... ....++ ..+.....+.|..-++. =+.+.++.+++.. +.|+
T Consensus 40 ~~~~~l~-~~~~~vIaeik~~sps~g~i~~~~~~-~~~A~~~~~~GA~aisvlte~~~f~g~~~~l~~v~~~v---~iPv 114 (260)
T PRK00278 40 DFAAALR-AGKPAVIAEVKKASPSKGVIREDFDP-VEIAKAYEAGGAACLSVLTDERFFQGSLEYLRAARAAV---SLPV 114 (260)
T ss_pred CHHHHHh-cCCCeEEEEeeCCCCCCCccCCCCCH-HHHHHHHHhCCCeEEEEecccccCCCCHHHHHHHHHhc---CCCE
Confidence 4666665 23467888999432111 112233 34556666667653332 4578888888875 4565
Q ss_pred EEEeccCCccCCCCCcchhHHhhcHHHHHh-hcceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCc
Q 005970 276 VFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPI 354 (667)
Q Consensus 276 ~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~ 354 (667)
+. .+.+.+ .| .+..... -|+.+......+-+ ..-.++++.+++.|+.+.+=+-+
T Consensus 115 l~----kdfi~~----~~-----qi~~a~~~GAD~VlLi~~~l~~-------~~l~~li~~a~~lGl~~lvevh~----- 169 (260)
T PRK00278 115 LR----KDFIID----PY-----QIYEARAAGADAILLIVAALDD-------EQLKELLDYAHSLGLDVLVEVHD----- 169 (260)
T ss_pred Ee----eeecCC----HH-----HHHHHHHcCCCEEEEEeccCCH-------HHHHHHHHHHHHcCCeEEEEeCC-----
Confidence 52 221111 11 1222222 25655543222111 01256999999999999988764
Q ss_pred ccCCCCChHHHHHHHHhCCCcccceEecC
Q 005970 355 SFNYSYDPLTEYLSFIDNGDFSVDGVLSD 383 (667)
Q Consensus 355 ~~~~~~d~~~e~~~li~~G~~gVDGIiTD 383 (667)
.+|.+++.+.| +|-|..+
T Consensus 170 --------~~E~~~A~~~g---adiIgin 187 (260)
T PRK00278 170 --------EEELERALKLG---APLIGIN 187 (260)
T ss_pred --------HHHHHHHHHcC---CCEEEEC
Confidence 25677788766 9999755
No 215
>PRK12330 oxaloacetate decarboxylase; Provisional
Probab=22.89 E-value=5.4e+02 Score=29.43 Aligned_cols=77 Identities=5% Similarity=0.016 Sum_probs=45.1
Q ss_pred CHHHHHHHHhc-cCCcEEEEeccc----hhhhhHHHHHHHHHhhhhcCCC--eeEEeCCCCCccHHHHHHHHHcCCcE--
Q 005970 588 DSSVLMKLREK-TSYELVYKVKEN----IRDALNQTIEDIKKFADSVVLT--MSLYLKRGTSSQTQLWRSTHITRELV-- 658 (667)
Q Consensus 588 d~~~L~~~~~~-p~~~~~~L~~~~----~~~~~~~~l~~~~~~a~~i~~~--~~i~~~~~~~~~~~~v~~ah~~Gl~V-- 658 (667)
+|+.|+.+++. |+.++..|.-.. +..+.....+...+.+...|++ ....+.+++......++.++++|..+
T Consensus 63 pwerlr~lr~~~~nt~lqmL~Rg~N~vGy~~y~ddvv~~fv~~a~~~Gidi~RIfd~lndv~nl~~ai~~vk~ag~~~~~ 142 (499)
T PRK12330 63 PWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYEDEVVDRFVEKSAENGMDVFRVFDALNDPRNLEHAMKAVKKVGKHAQG 142 (499)
T ss_pred HHHHHHHHHHhCCCCeEEEEEcccccCCccCcchhHHHHHHHHHHHcCCCEEEEEecCChHHHHHHHHHHHHHhCCeEEE
Confidence 68999999999 999988877431 2222222222222222233555 33344444434457888889998865
Q ss_pred -EEEecc
Q 005970 659 -LMELLQ 664 (667)
Q Consensus 659 -~vWTVn 664 (667)
.+||+.
T Consensus 143 ~i~yt~s 149 (499)
T PRK12330 143 TICYTVS 149 (499)
T ss_pred EEEEecC
Confidence 355654
No 216
>KOG4530 consensus Predicted flavoprotein [General function prediction only]
Probab=22.62 E-value=15 Score=34.78 Aligned_cols=57 Identities=16% Similarity=0.128 Sum_probs=35.2
Q ss_pred CCCCchhhhhhhhhcCcCcccCCceeEE---EecCCCCC-----------------CCchhHHHHHHHHHCCCCeEEcce
Q 005970 384 FPLTPSAAVDCFAHLGKNASKSANLLVI---SKNGASGD-----------------YPSCTNLAYQKAISDGVDFIDCPV 443 (667)
Q Consensus 384 ~P~~~~~~l~~~~~~~~~~~~~~~~~ii---aHRG~~~~-----------------~PENTl~Af~~A~~~Gad~iE~DV 443 (667)
||+.+..++... ...|.+++.+|+ ||.|++.. -||-|+.+|+---..-+.+.++|+
T Consensus 101 ypA~LKNAlD~l----yheW~gKPalivSyGGhGGg~c~~qL~~v~~fLkm~vai~~P~~Tlp~~~~pq~~v~~~~~~~~ 176 (199)
T KOG4530|consen 101 YPAPLKNALDWL----YHEWAGKPALIVSYGGHGGGRCQYQLRQVGVFLKMHVAINKPEFTLPAFQPPQKFVAEGNLVDE 176 (199)
T ss_pred CchHHHHHHHHh----hhhhcCCceEEEEecCCCCchHHHHHHHHHhhheeeeeccCcccccccccCchhccCchhhHHH
Confidence 344445555444 235777777766 46555422 388888888777666666677776
Q ss_pred e
Q 005970 444 Q 444 (667)
Q Consensus 444 ~ 444 (667)
+
T Consensus 177 h 177 (199)
T KOG4530|consen 177 H 177 (199)
T ss_pred H
Confidence 5
No 217
>PF12957 DUF3846: Domain of unknown function (DUF3846); InterPro: IPR024559 A family of uncharacterised proteins found by clustering human gut metagenomic sequences []. In a few cases it is found fused to the C terminus of ArdA (Pfam:PF07275). ArdA functions in bacterial conjugation to allow an unmodified plasmid to evade restriction in the recipient bacterium and yet acquire cognate modification [].
Probab=22.44 E-value=1.2e+02 Score=26.10 Aligned_cols=36 Identities=22% Similarity=0.137 Sum_probs=29.1
Q ss_pred CCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcc
Q 005970 419 DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINL 459 (667)
Q Consensus 419 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L 459 (667)
...+||+.++++++ ..+||+ |.+ .|+..++++|+-.
T Consensus 14 ~~i~~~l~~lq~~V---gG~ie~-v~l-~~~~~l~~neeGk 49 (95)
T PF12957_consen 14 IEIDNSLEALQKLV---GGYIEV-VYL-DDGVVLYCNEEGK 49 (95)
T ss_pred EecCCCHHHHHHHH---CCeEEE-Eec-CCCEEEEEeCccC
Confidence 35688899999999 578888 777 6788888888763
No 218
>PRK06806 fructose-bisphosphate aldolase; Provisional
Probab=21.76 E-value=6.2e+02 Score=26.52 Aligned_cols=101 Identities=18% Similarity=0.141 Sum_probs=56.6
Q ss_pred hHHHHHHHHcCCeEEEEec--c-CCCC-cccCCCCChHHHHHHHHhCCCcccceEec----------CCCCCchhhhhhh
Q 005970 330 TTIVLDAHKERLEVFASNF--A-NDIP-ISFNYSYDPLTEYLSFIDNGDFSVDGVLS----------DFPLTPSAAVDCF 395 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTv--n-~~~~-~~~~~~~d~~~e~~~li~~G~~gVDGIiT----------D~P~~~~~~l~~~ 395 (667)
.++++.+|+.|..|-+=.. . .+.. ..........++...+.+. .|||.+-- +.|..-...+++.
T Consensus 118 ~~v~~~a~~~gv~veaE~ghlG~~d~~~~~~g~s~t~~eea~~f~~~--tg~DyLAvaiG~~hg~~~~~~~l~~~~L~~i 195 (281)
T PRK06806 118 KEIVELAKQYGATVEAEIGRVGGSEDGSEDIEMLLTSTTEAKRFAEE--TDVDALAVAIGNAHGMYNGDPNLRFDRLQEI 195 (281)
T ss_pred HHHHHHHHHcCCeEEEEeeeECCccCCcccccceeCCHHHHHHHHHh--hCCCEEEEccCCCCCCCCCCCccCHHHHHHH
Confidence 4578888888887643322 1 1111 1111122345667777652 23887766 4455545555544
Q ss_pred hhcCcCcccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEccee
Q 005970 396 AHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (667)
Q Consensus 396 ~~~~~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~ 444 (667)
... .. .=+++|- +||.-+|| +.++++.|++.|-+.--
T Consensus 196 ~~~------~~-iPlV~hG-~SGI~~e~----~~~~i~~G~~kinv~T~ 232 (281)
T PRK06806 196 NDV------VH-IPLVLHG-GSGISPED----FKKCIQHGIRKINVATA 232 (281)
T ss_pred HHh------cC-CCEEEEC-CCCCCHHH----HHHHHHcCCcEEEEhHH
Confidence 321 01 2368885 46777777 67789999988765433
No 219
>COG2200 Rtn c-di-GMP phosphodiesterase class I (EAL domain) [Signal transduction mechanisms]
Probab=21.72 E-value=1.2e+02 Score=31.05 Aligned_cols=40 Identities=25% Similarity=0.218 Sum_probs=31.9
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCC
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDF 384 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~ 384 (667)
..++..+|+.|++|.+..|.++ .+.+.+.++| ||.+.=.+
T Consensus 196 ~~iv~la~~l~~~vvaEGVEt~------------~ql~~L~~~G---~~~~QGyl 235 (256)
T COG2200 196 RAIVALAHKLGLTVVAEGVETE------------EQLDLLRELG---CDYLQGYL 235 (256)
T ss_pred HHHHHHHHHCCCEEEEeecCCH------------HHHHHHHHcC---CCeEeecc
Confidence 4589999999999999999654 6788888777 87655443
No 220
>cd04731 HisF The cyclase subunit of imidazoleglycerol phosphate synthase (HisF). Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to imidazole glycerol phosphate (ImGP) and 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR). This conversion involves two tightly coupled reactions in distinct active sites of IGPS. The two catalytic domains can be fused, like in fungi and plants, or peformed by a heterodimer (HisH-glutaminase and HisF-cyclase), like in bacteria.
Probab=21.21 E-value=2e+02 Score=29.14 Aligned_cols=77 Identities=13% Similarity=0.016 Sum_probs=47.4
Q ss_pred hHHHHHHHHhCCCcccceEecCC-----CCCchhhhhhhhh--cCcC-cccCCce--eEEEecCCCCCCCchhHHHHHHH
Q 005970 362 PLTEYLSFIDNGDFSVDGVLSDF-----PLTPSAAVDCFAH--LGKN-ASKSANL--LVISKNGASGDYPSCTNLAYQKA 431 (667)
Q Consensus 362 ~~~e~~~li~~G~~gVDGIiTD~-----P~~~~~~l~~~~~--~~~~-~~~~~~~--~iiaHRG~~~~~PENTl~Af~~A 431 (667)
..++++.++..| +|+|+... |+.+.++.+.+.. ..-+ ....... .-+..||+....++.+..-.+.+
T Consensus 82 s~~d~~~~l~~G---~~~v~ig~~~~~~p~~~~~i~~~~~~~~i~~~ld~k~~~~~~~~v~~~~~~~~~~~~~~~~~~~l 158 (243)
T cd04731 82 SLEDARRLLRAG---ADKVSINSAAVENPELIREIAKRFGSQCVVVSIDAKRRGDGGYEVYTHGGRKPTGLDAVEWAKEV 158 (243)
T ss_pred CHHHHHHHHHcC---CceEEECchhhhChHHHHHHHHHcCCCCEEEEEEeeecCCCceEEEEcCCceecCCCHHHHHHHH
Confidence 346778888776 99998876 4444454444311 1000 0000111 34678888777788888777888
Q ss_pred HHCCCCeEEc
Q 005970 432 ISDGVDFIDC 441 (667)
Q Consensus 432 ~~~Gad~iE~ 441 (667)
.+.|+|+|.+
T Consensus 159 ~~~G~d~i~v 168 (243)
T cd04731 159 EELGAGEILL 168 (243)
T ss_pred HHCCCCEEEE
Confidence 8999887644
No 221
>PRK12858 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=21.03 E-value=5e+02 Score=28.08 Aligned_cols=105 Identities=12% Similarity=0.216 Sum_probs=57.0
Q ss_pred hHHHHHHHHcCCeEEEE--eccCCC--CcccCCCC-Ch--HHH-HHHHHhCCCcccceEecCCCCCchh-----------
Q 005970 330 TTIVLDAHKERLEVFAS--NFANDI--PISFNYSY-DP--LTE-YLSFIDNGDFSVDGVLSDFPLTPSA----------- 390 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~W--Tvn~~~--~~~~~~~~-d~--~~e-~~~li~~G~~gVDGIiTD~P~~~~~----------- 390 (667)
.++.+.|++.|+.++.. +..... .....|.. ++ ... ++.+.+ -++|||-+=+.+|..+..
T Consensus 146 ~rv~~ec~~~giPlllE~l~y~~~~~~~~~~~~a~~~p~~V~~a~r~~~~-~elGaDvlKve~p~~~~~veg~~~~~~~~ 224 (340)
T PRK12858 146 ERVGAECRANDIPFFLEPLTYDGKGSDKKAEEFAKVKPEKVIKTMEEFSK-PRYGVDVLKVEVPVDMKFVEGFDGFEEAY 224 (340)
T ss_pred HHHHHHHHHcCCceEEEEeccCCCccccccccccccCHHHHHHHHHHHhh-hccCCeEEEeeCCCCcccccccccccccc
Confidence 45788999999998874 543211 11101111 11 222 233332 025599999999965311
Q ss_pred ----hhhhhhhcCcCcccCCceeEEEecCCCCCCCchhHHHHHHHHHCCC--CeEEc
Q 005970 391 ----AVDCFAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGV--DFIDC 441 (667)
Q Consensus 391 ----~l~~~~~~~~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Ga--d~iE~ 441 (667)
+.+.+... ..-.+.|.|+.-.|. -.+--+...+.|++.|| .|+=|
T Consensus 225 ~~~~~~~~f~~~---~~a~~~P~vvlsgG~---~~~~f~~~l~~A~~aGa~f~Gvl~ 275 (340)
T PRK12858 225 TQEEAFKLFREQ---SDATDLPFIFLSAGV---SPELFRRTLEFACEAGADFSGVLC 275 (340)
T ss_pred cHHHHHHHHHHH---HhhCCCCEEEECCCC---CHHHHHHHHHHHHHcCCCccchhh
Confidence 11111111 111345788877764 33557788888999998 55533
No 222
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily. The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".
Probab=20.90 E-value=3.2e+02 Score=27.70 Aligned_cols=99 Identities=18% Similarity=0.072 Sum_probs=54.2
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCCh-HHHHHHHHhCCCcccceEec------CCCCCchhhhhhhhhcCcCc
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDP-LTEYLSFIDNGDFSVDGVLS------DFPLTPSAAVDCFAHLGKNA 402 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~-~~e~~~li~~G~~gVDGIiT------D~P~~~~~~l~~~~~~~~~~ 402 (667)
...++.+++.|+.|.+.+..--.+ .+..+. .+.++.+.+.| +|.|.- -.|....++++.....
T Consensus 118 ~~~i~~a~~~G~~v~~~~~~~~~~---~~~~~~l~~~~~~~~~~g---~~~i~l~Dt~G~~~P~~v~~li~~l~~~---- 187 (265)
T cd03174 118 EEAIEAAKEAGLEVEGSLEDAFGC---KTDPEYVLEVAKALEEAG---ADEISLKDTVGLATPEEVAELVKALREA---- 187 (265)
T ss_pred HHHHHHHHHCCCeEEEEEEeecCC---CCCHHHHHHHHHHHHHcC---CCEEEechhcCCcCHHHHHHHHHHHHHh----
Confidence 347889999999987776321100 010111 23445566555 987663 2355555555444321
Q ss_pred ccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcce
Q 005970 403 SKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPV 443 (667)
Q Consensus 403 ~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV 443 (667)
.+..+.-+-+|-- .|.+..|+++| ++.||++|+.-+
T Consensus 188 ~~~~~~~~H~Hn~-~gla~an~laA----~~aG~~~id~s~ 223 (265)
T cd03174 188 LPDVPLGLHTHNT-LGLAVANSLAA----LEAGADRVDGSV 223 (265)
T ss_pred CCCCeEEEEeCCC-CChHHHHHHHH----HHcCCCEEEecc
Confidence 1112333444432 45677888877 578998876544
No 223
>PF05399 EVI2A: Ectropic viral integration site 2A protein (EVI2A); InterPro: IPR008608 This family contains several mammalian ectropic viral integration site 2A (EVI2A) proteins. The function of this protein is unknown although it is thought to be a membrane protein and may function as an oncogene in retrovirus induced myeloid tumours [, ].; GO: 0016021 integral to membrane
Probab=20.77 E-value=1.3e+02 Score=29.93 Aligned_cols=14 Identities=29% Similarity=0.351 Sum_probs=9.2
Q ss_pred ccccceehhhhhcC
Q 005970 25 KEEKSRTFIKRIGG 38 (667)
Q Consensus 25 ~~~~~~~~~~~~~~ 38 (667)
.+.|..-|.+.+|+
T Consensus 109 ~k~~~~~~kk~~CE 122 (227)
T PF05399_consen 109 SKSQSEIFKKEICE 122 (227)
T ss_pred CCCcccccchhhhh
Confidence 34444578888887
No 224
>cd07938 DRE_TIM_HMGL 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain. 3-hydroxy-3-methylglutaryl-CoA lyase (HMGL) catalyzes the cleavage of HMG-CoA to acetyl-CoA and acetoacetate, one of the terminal steps in ketone body generation and leucine degradation, and is a key enzyme in the pathway that supplies metabolic fuel to extrahepatic tissues. Mutations in HMGL cause a human autosomal recessive disorder called primary metabolic aciduria that affects ketogenesis and leucine catabolism and can be fatal due to an inability to tolerate hypoglycemia. HMGL has a TIM barrel domain with a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. The cleavage of HMG-CoA requires the presence of a divalent cation like Mg2+ or Mn2+, and the reaction is thought to involve general acid/base catalysis. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropy
Probab=20.64 E-value=2.9e+02 Score=28.77 Aligned_cols=98 Identities=15% Similarity=0.119 Sum_probs=52.7
Q ss_pred hHHHHHHHHcCCeEEE---EeccCCCCcccCCCCCh-HHHHHHHHhCCCcccceEe-cCC-----CCCchhhhhhhhhcC
Q 005970 330 TTIVLDAHKERLEVFA---SNFANDIPISFNYSYDP-LTEYLSFIDNGDFSVDGVL-SDF-----PLTPSAAVDCFAHLG 399 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~---WTvn~~~~~~~~~~~d~-~~e~~~li~~G~~gVDGIi-TD~-----P~~~~~~l~~~~~~~ 399 (667)
...++.+++.|+.|.+ +++..+.... +..+. .+..+.+.+.| +|.|. .|- |..+.++.+....
T Consensus 117 ~~~v~~ak~~G~~v~~~i~~~f~~~~~~~--~~~~~~~~~~~~~~~~G---a~~i~l~DT~G~~~P~~v~~lv~~l~~-- 189 (274)
T cd07938 117 EPVAELAKAAGLRVRGYVSTAFGCPYEGE--VPPERVAEVAERLLDLG---CDEISLGDTIGVATPAQVRRLLEAVLE-- 189 (274)
T ss_pred HHHHHHHHHCCCeEEEEEEeEecCCCCCC--CCHHHHHHHHHHHHHcC---CCEEEECCCCCccCHHHHHHHHHHHHH--
Confidence 3479999999999852 2332210000 00011 23345566555 98764 332 5555555544432
Q ss_pred cCcccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEc
Q 005970 400 KNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDC 441 (667)
Q Consensus 400 ~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~ 441 (667)
..+..+.-+-+|-- .|.+.-|+++| ++.||++|+.
T Consensus 190 --~~~~~~i~~H~Hnd-~GlA~AN~laA----~~aGa~~id~ 224 (274)
T cd07938 190 --RFPDEKLALHFHDT-RGQALANILAA----LEAGVRRFDS 224 (274)
T ss_pred --HCCCCeEEEEECCC-CChHHHHHHHH----HHhCCCEEEE
Confidence 12223344556643 46678888776 6788887764
No 225
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=20.50 E-value=3.1e+02 Score=26.77 Aligned_cols=71 Identities=14% Similarity=0.191 Sum_probs=33.6
Q ss_pred ceEEEEeCCHHHHHHHHhc-c-CCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCCccHHHHHHHHHcCCc
Q 005970 580 LKVMIQSTDSSVLMKLREK-T-SYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTSSQTQLWRSTHITREL 657 (667)
Q Consensus 580 ~~v~i~SFd~~~L~~~~~~-p-~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~~~~~~v~~ah~~Gl~ 657 (667)
-+++++++.+.....+++. | .+...++=- | ....+.++.+.+.|...+....+ .=+.++..++++|++
T Consensus 51 ~~illT~~T~tg~~~~~~~~~~~v~~~~~P~----D----~~~~~~rfl~~~~P~~~i~~EtE--lWPnll~~a~~~~ip 120 (186)
T PF04413_consen 51 LRILLTTTTPTGREMARKLLPDRVDVQYLPL----D----FPWAVRRFLDHWRPDLLIWVETE--LWPNLLREAKRRGIP 120 (186)
T ss_dssp S-EEEEES-CCHHHHHHGG-GGG-SEEE-------S----SHHHHHHHHHHH--SEEEEES------HHHHHH-----S-
T ss_pred CeEEEEecCCchHHHHHHhCCCCeEEEEeCc----c----CHHHHHHHHHHhCCCEEEEEccc--cCHHHHHHHhhcCCC
Confidence 4899999988888888877 4 455554311 1 12234555566666633332222 124899999999998
Q ss_pred EEE
Q 005970 658 VLM 660 (667)
Q Consensus 658 V~v 660 (667)
+..
T Consensus 121 ~~L 123 (186)
T PF04413_consen 121 VVL 123 (186)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 226
>PRK05692 hydroxymethylglutaryl-CoA lyase; Provisional
Probab=20.38 E-value=3.2e+02 Score=28.66 Aligned_cols=98 Identities=10% Similarity=0.067 Sum_probs=53.5
Q ss_pred hHHHHHHHHcCCeEEE---EeccCCCCcccCCCCCh-HHHHHHHHhCCCcccceEe-cC-----CCCCchhhhhhhhhcC
Q 005970 330 TTIVLDAHKERLEVFA---SNFANDIPISFNYSYDP-LTEYLSFIDNGDFSVDGVL-SD-----FPLTPSAAVDCFAHLG 399 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~---WTvn~~~~~~~~~~~d~-~~e~~~li~~G~~gVDGIi-TD-----~P~~~~~~l~~~~~~~ 399 (667)
...|+.+++.|+.|.+ .++..+.... ...+. .+..+.+.+.| +|.|. .| .|..+.++++....
T Consensus 123 ~~~v~~ak~~g~~v~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~G---~d~i~l~DT~G~~~P~~v~~lv~~l~~-- 195 (287)
T PRK05692 123 EPVAEAAKQAGVRVRGYVSCVLGCPYEGE--VPPEAVADVAERLFALG---CYEISLGDTIGVGTPGQVRAVLEAVLA-- 195 (287)
T ss_pred HHHHHHHHHcCCEEEEEEEEEecCCCCCC--CCHHHHHHHHHHHHHcC---CcEEEeccccCccCHHHHHHHHHHHHH--
Confidence 3589999999999852 3332210000 00011 23456667666 99774 34 36555555554432
Q ss_pred cCcccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEc
Q 005970 400 KNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDC 441 (667)
Q Consensus 400 ~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~ 441 (667)
..+..+.-+-.|- -.|.+..|+++| ++.||++|+.
T Consensus 196 --~~~~~~i~~H~Hn-~~Gla~AN~laA----~~aG~~~id~ 230 (287)
T PRK05692 196 --EFPAERLAGHFHD-TYGQALANIYAS----LEEGITVFDA 230 (287)
T ss_pred --hCCCCeEEEEecC-CCCcHHHHHHHH----HHhCCCEEEE
Confidence 1111234455553 246677888766 6789997754
No 227
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=20.32 E-value=90 Score=34.67 Aligned_cols=30 Identities=27% Similarity=0.197 Sum_probs=24.8
Q ss_pred hHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCccccccc
Q 005970 424 TNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTN 464 (667)
Q Consensus 424 Tl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~ 464 (667)
++.|...|+.. -.-||+||.||..|-+-|+
T Consensus 739 SIDALaEAIne-----------y~GgVi~VsHDeRLi~eT~ 768 (807)
T KOG0066|consen 739 SIDALAEAINE-----------YNGGVIMVSHDERLIVETD 768 (807)
T ss_pred hHHHHHHHHHh-----------ccCcEEEEecccceeeecC
Confidence 66788888875 3679999999999988887
No 228
>PRK08195 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated
Probab=20.27 E-value=7.1e+02 Score=26.80 Aligned_cols=24 Identities=21% Similarity=0.415 Sum_probs=14.0
Q ss_pred ccCHHHHHHHHHhcCCcceE-EEEee
Q 005970 524 FMKLSDFLEMAKNANSLSGV-LISIE 548 (667)
Q Consensus 524 iPtL~EvL~~~~~~~~~~~l-~iEiK 548 (667)
-.+.++.++.++.... .|+ .||+=
T Consensus 21 ~f~~~~~~~i~~~L~~-aGv~~IEvg 45 (337)
T PRK08195 21 QYTLEQVRAIARALDA-AGVPVIEVT 45 (337)
T ss_pred ccCHHHHHHHHHHHHH-cCCCEEEee
Confidence 4556777777765422 255 67774
No 229
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=20.07 E-value=3.7e+02 Score=23.39 Aligned_cols=65 Identities=17% Similarity=0.109 Sum_probs=45.8
Q ss_pred hHHHHHHHHcCCeEEEEeccC-C-CCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhhhhhh
Q 005970 330 TTIVLDAHKERLEVFASNFAN-D-IPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFA 396 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~-~-~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~~~~ 396 (667)
.++...+...|+.|..-.+-+ . ....+..+.....++..++. ..++|.|+.|.+-...+.++--.
T Consensus 11 ~El~~L~~t~g~~vv~~~~q~~~~~~p~~~iG~GK~eei~~~~~--~~~~d~vvfd~~Lsp~Q~rNLe~ 77 (95)
T PF13167_consen 11 EELEELAETAGYEVVGTVVQKRRKPDPKTYIGSGKVEEIKELIE--ELDADLVVFDNELSPSQQRNLEK 77 (95)
T ss_pred HHHHHHHHHCCCeEEEEEEecCCCCCcceeechhHHHHHHHHHh--hcCCCEEEECCCCCHHHHHHHHH
Confidence 346777778888887655543 2 23455566777889988887 44799999999877776665433
Done!