Query 005970
Match_columns 667
No_of_seqs 467 out of 2916
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 12:28:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005970.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005970hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydy_A Glycerophosphoryl diest 100.0 1.9E-47 6.5E-52 411.3 23.6 286 89-392 28-355 (356)
2 3qvq_A Phosphodiesterase OLEI0 100.0 6.1E-45 2.1E-49 373.5 22.4 242 84-395 2-250 (252)
3 2pz0_A Glycerophosphoryl diest 100.0 6.8E-45 2.3E-49 373.1 21.3 235 90-394 10-250 (252)
4 2oog_A Glycerophosphoryl diest 100.0 7.9E-45 2.7E-49 379.7 19.6 249 83-394 14-280 (287)
5 2otd_A Glycerophosphodiester p 100.0 7.9E-44 2.7E-48 364.2 23.0 233 91-393 6-245 (247)
6 3l12_A Putative glycerophospho 100.0 4.5E-43 1.5E-47 370.8 23.4 263 90-395 16-308 (313)
7 3ks6_A Glycerophosphoryl diest 100.0 2.3E-43 8E-48 361.2 18.4 239 91-396 2-245 (250)
8 3ch0_A Glycerophosphodiester p 100.0 9.9E-43 3.4E-47 361.1 22.6 246 91-390 8-271 (272)
9 2o55_A Putative glycerophospho 100.0 1.3E-42 4.5E-47 357.4 22.2 238 90-395 5-256 (258)
10 2pz0_A Glycerophosphoryl diest 100.0 1.1E-42 3.8E-47 356.7 21.1 212 406-666 10-222 (252)
11 3qvq_A Phosphodiesterase OLEI0 100.0 3.6E-42 1.2E-46 352.9 22.6 217 402-666 4-221 (252)
12 2oog_A Glycerophosphoryl diest 100.0 1.9E-42 6.5E-47 361.7 18.8 223 404-666 20-252 (287)
13 1zcc_A Glycerophosphodiester p 100.0 3.3E-43 1.1E-47 359.7 10.5 229 92-397 2-237 (248)
14 3mz2_A Glycerophosphoryl diest 100.0 1.1E-41 3.9E-46 355.5 21.8 245 83-396 23-279 (292)
15 3l12_A Putative glycerophospho 100.0 1.3E-41 4.5E-46 359.6 21.9 255 396-666 6-279 (313)
16 2otd_A Glycerophosphodiester p 100.0 1.5E-41 5.3E-46 347.2 21.5 213 406-666 5-218 (247)
17 3ks6_A Glycerophosphoryl diest 100.0 1E-41 3.5E-46 349.0 19.3 213 407-666 2-215 (250)
18 3no3_A Glycerophosphodiester p 100.0 6.8E-42 2.3E-46 347.7 17.5 225 90-395 3-236 (238)
19 1ydy_A Glycerophosphoryl diest 100.0 1.2E-41 4.2E-46 366.0 18.5 253 405-666 28-318 (356)
20 3ch0_A Glycerophosphodiester p 100.0 6.7E-41 2.3E-45 347.4 21.0 228 406-666 7-247 (272)
21 1vd6_A Glycerophosphoryl diest 100.0 1.5E-40 5.3E-45 334.8 20.0 215 90-392 6-223 (224)
22 1o1z_A GDPD, glycerophosphodie 100.0 6.5E-41 2.2E-45 339.6 17.4 222 90-392 11-234 (234)
23 2o55_A Putative glycerophospho 100.0 1.9E-40 6.3E-45 341.4 20.6 212 405-665 4-226 (258)
24 1zcc_A Glycerophosphodiester p 100.0 2.2E-41 7.4E-46 346.2 8.0 202 408-666 2-205 (248)
25 3no3_A Glycerophosphodiester p 100.0 9.9E-40 3.4E-44 331.8 18.0 201 406-666 3-207 (238)
26 3mz2_A Glycerophosphoryl diest 100.0 4.3E-39 1.5E-43 336.0 21.2 206 403-665 27-238 (292)
27 1o1z_A GDPD, glycerophosphodie 100.0 1.3E-39 4.4E-44 330.1 14.4 195 405-666 10-209 (234)
28 3i10_A Putative glycerophospho 100.0 3.4E-38 1.2E-42 326.2 20.7 251 88-395 14-274 (278)
29 1vd6_A Glycerophosphoryl diest 100.0 5.6E-38 1.9E-42 316.1 18.5 192 404-666 4-197 (224)
30 3i10_A Putative glycerophospho 100.0 1.8E-37 6E-42 320.8 18.6 212 403-663 13-226 (278)
31 1xx1_A Smase I, sphingomyelina 100.0 1.4E-32 4.8E-37 286.7 7.1 228 90-395 4-264 (285)
32 1xx1_A Smase I, sphingomyelina 99.9 4.5E-29 1.5E-33 260.2 6.3 200 406-666 4-235 (285)
33 3rlg_A Sphingomyelin phosphodi 99.8 1.1E-20 3.6E-25 192.3 13.3 226 89-395 25-281 (302)
34 3rlg_A Sphingomyelin phosphodi 99.6 1.7E-15 5.7E-20 154.3 12.6 137 405-598 26-168 (302)
35 1djx_A PLC-D1, phosphoinositid 92.4 0.073 2.5E-06 60.6 4.0 53 409-461 175-230 (624)
36 2zkm_X 1-phosphatidylinositol- 91.1 0.14 4.7E-06 60.0 4.4 55 407-461 321-380 (799)
37 3qr0_A Phospholipase C-beta (P 90.5 0.16 5.6E-06 59.2 4.3 54 407-460 332-388 (816)
38 1djx_A PLC-D1, phosphoinositid 88.6 0.3 1E-05 55.5 4.5 49 95-145 177-228 (624)
39 3ohm_B 1-phosphatidylinositol- 88.0 0.22 7.5E-06 58.6 3.0 53 408-460 326-383 (885)
40 3h4x_A Phosphatidylinositol-sp 87.1 1.3 4.4E-05 45.5 7.6 53 405-461 29-82 (339)
41 2zkm_X 1-phosphatidylinositol- 86.9 0.41 1.4E-05 56.0 4.4 50 94-145 324-378 (799)
42 3qr0_A Phospholipase C-beta (P 85.8 0.49 1.7E-05 55.2 4.3 50 94-145 335-387 (816)
43 3ohm_B 1-phosphatidylinositol- 78.5 0.98 3.3E-05 53.1 3.1 50 94-145 328-382 (885)
44 3glc_A Aldolase LSRF; TIM barr 75.2 11 0.00037 38.4 9.5 89 331-439 162-254 (295)
45 2qjg_A Putative aldolase MJ040 73.7 11 0.00037 37.5 9.1 101 330-441 135-236 (273)
46 3h4x_A Phosphatidylinositol-sp 70.9 3.7 0.00013 42.1 4.7 50 92-147 32-82 (339)
47 3fok_A Uncharacterized protein 68.1 9.9 0.00034 38.7 7.1 93 330-440 166-271 (307)
48 3nvt_A 3-deoxy-D-arabino-heptu 63.2 1.2E+02 0.004 32.0 14.6 21 328-348 237-257 (385)
49 3qja_A IGPS, indole-3-glycerol 59.5 89 0.003 31.1 12.4 139 205-384 40-190 (272)
50 1to3_A Putative aldolase YIHT; 55.7 25 0.00087 35.8 7.7 96 330-439 145-251 (304)
51 1zco_A 2-dehydro-3-deoxyphosph 52.6 1.5E+02 0.0052 29.2 12.7 19 329-347 119-137 (262)
52 3tsm_A IGPS, indole-3-glycerol 52.3 1.9E+02 0.0064 28.8 14.9 188 204-439 42-246 (272)
53 3f4w_A Putative hexulose 6 pho 40.9 96 0.0033 29.0 8.9 42 330-383 93-134 (211)
54 3g8r_A Probable spore coat pol 38.9 2.2E+02 0.0074 29.5 11.6 32 90-121 4-36 (350)
55 1yxy_A Putative N-acetylmannos 34.9 70 0.0024 30.6 6.9 98 330-444 8-110 (234)
56 3a24_A Alpha-galactosidase; gl 34.4 18 0.00062 40.8 2.7 74 330-413 350-424 (641)
57 1w8s_A FBP aldolase, fructose- 33.9 1.5E+02 0.0053 29.1 9.3 100 330-439 128-228 (263)
58 3o27_A Putative uncharacterize 33.4 22 0.00076 27.4 2.2 44 95-140 14-59 (68)
59 1i4n_A Indole-3-glycerol phosp 32.2 1.5E+02 0.0052 29.1 8.8 140 207-387 30-182 (251)
60 1vs1_A 3-deoxy-7-phosphoheptul 29.1 4.3E+02 0.015 26.1 12.8 29 239-267 92-121 (276)
61 3tha_A Tryptophan synthase alp 26.8 3.2E+02 0.011 26.7 10.1 119 524-658 24-144 (252)
62 3vnd_A TSA, tryptophan synthas 26.2 20 0.00068 35.9 1.1 33 420-452 28-65 (267)
63 1xfj_A Conserved hypothetical 25.8 16 0.00055 36.4 0.4 57 376-437 94-155 (261)
64 1tqj_A Ribulose-phosphate 3-ep 25.7 30 0.001 33.5 2.3 29 421-452 16-44 (230)
65 1vli_A Spore coat polysacchari 24.2 4.7E+02 0.016 27.3 11.3 35 90-126 27-62 (385)
66 1rpx_A Protein (ribulose-phosp 22.4 33 0.0011 32.9 1.9 29 421-452 22-50 (230)
67 2p10_A MLL9387 protein; putati 21.7 1E+02 0.0035 30.9 5.3 87 330-439 153-256 (286)
68 2d73_A Alpha-glucosidase SUSB; 21.2 48 0.0016 37.9 3.1 51 330-385 421-471 (738)
69 3ble_A Citramalate synthase fr 20.8 1.1E+02 0.0038 31.4 5.6 96 330-443 140-246 (337)
70 2obb_A Hypothetical protein; s 20.4 1E+02 0.0034 27.5 4.5 50 330-388 30-79 (142)
71 1tqj_A Ribulose-phosphate 3-ep 20.1 49 0.0017 32.0 2.5 30 104-138 15-44 (230)
72 1h1y_A D-ribulose-5-phosphate 20.0 43 0.0015 32.2 2.1 29 421-452 18-46 (228)
No 1
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=100.00 E-value=1.9e-47 Score=411.28 Aligned_cols=286 Identities=20% Similarity=0.331 Sum_probs=215.7
Q ss_pred CCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCC
Q 005970 89 GDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVP 168 (667)
Q Consensus 89 ~~~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~ 168 (667)
+.+|+||||||+++.+||||++||+.|+++|+| +||+|||+||||++||+||.+|+|||++.+.|+.+++. +|.
T Consensus 28 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~f~~~~~~---~g~- 101 (356)
T 1ydy_A 28 SNEKIVIAHRGASGYLPEHTLPAKAMAYAQGAD--YLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARK---DGR- 101 (356)
T ss_dssp -CCCEEEETTTTTTTSSTTCHHHHHHHHHTTCS--EEEEEEEECTTSCEEECSSSBCTTTBSHHHHSTTCCCT---TSC-
T ss_pred CCCceEEEeCCCCCCCCcchHHHHHHHHHcCCC--EEEeeeEECCCCcEEEeCCChHHhhcCccccccccccc---CCC-
Confidence 457999999999999999999999999999999 99999999999999999999999999988878776543 333
Q ss_pred CCccccccCCHHhhccccccccccC--------CCCCCC---CCCCccCCHHHHHHhhC--------CCceEEeccCchh
Q 005970 169 TPGWFSIDYTLNDLSNIILNQGVYS--------RTDKFD---GNGFQILTVQDMARQIK--------PPGLWLNIQHDAF 229 (667)
Q Consensus 169 ~~g~~v~d~t~~el~~l~~~~~~~~--------~~~~~~---~~~~~iptL~e~l~~~~--------~~~~~ieiK~~~~ 229 (667)
++|.|+||+||++|+++.|+.. ++..|. + +++||||+|+|++++ +.+++||+|.+..
T Consensus 102 ---~~v~d~T~~eL~~l~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~iptL~evl~~~~~~~~~~~~~~~l~iEiK~~~~ 177 (356)
T 1ydy_A 102 ---YYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKS-DFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWF 177 (356)
T ss_dssp ---CBGGGSCHHHHHHSCBCSCEEEETTEEEESSTTSSCTTCS-CCCCCBHHHHHHHHHHHHHHHSCCCEEEEEECCHHH
T ss_pred ---cchhhCcHHHHHhCCCCccccccccccccccccccccccC-CCcCCCHHHHHHHHHHhhhcccCCceEEEeecCccc
Confidence 6899999999999999987631 122332 2 469999999999985 4789999998765
Q ss_pred hhhcCCcHHHHHHHHHhhcCC------ceEecCCHHHHHHHHhhh----CCCCCceEEEeccCCccCC---------CCC
Q 005970 230 YAQHNLSMRSFVLSVSRSVVV------NYISSPEVNFLRSIAARF----RPSMTKLVFRFLGKSEIEP---------TTN 290 (667)
Q Consensus 230 ~~~~~~~~~~~l~~~l~~~~~------~~i~SFd~~~L~~l~~~~----~~~~~~~~~~l~~~~~~~~---------~~~ 290 (667)
....+..+++.++++++++++ ++|+|||+..|+++++.. .| +.++++ ++....+.. ..+
T Consensus 178 ~~~~~~~~~~~v~~~l~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~p~~~p-~~~~~~-L~~~~~~~~~~~~~~~~~~~~ 255 (356)
T 1ydy_A 178 HHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGM-ELNLVQ-LIAYTDWNETQQKQPDGSWVN 255 (356)
T ss_dssp HHHTTCCHHHHHHHHHHHTTCCSTTSSBEEEESCHHHHHHHHHTHHHHHTC-CCEEEE-EECCGGGCCCEEECTTSCEEE
T ss_pred ccccchhHHHHHHHHHHHcCCCCCCCCEEEEcCCHHHHHHHHhhcccccCC-CceEEE-EeccCcccccccccccccccc
Confidence 544455788999999999875 499999999999999972 23 577776 433221110 011
Q ss_pred cchhHHh--hcHHHHHhhcceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHH-H
Q 005970 291 QTYGSLL--KNLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEY-L 367 (667)
Q Consensus 291 ~~y~~~~--~~l~~i~~~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~-~ 367 (667)
..|.++. ..+..+..++.+++|.+..+.+.........++++|+.+|++|++|++||||++... .|..|+ .++ +
T Consensus 256 ~~~~~~~~~~~l~~~~~~a~~i~p~~~~~~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~l~--~~~~d~-~~~~~ 332 (356)
T 1ydy_A 256 YNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLP--EYTPDV-NQLYD 332 (356)
T ss_dssp CCCGGGGSTTHHHHHTTTCSEEEEBGGGTBCTTCBTTBCCBCSHHHHHHHTTCEECCBCBCTTSCC--TTCSSH-HHHHH
T ss_pred cchhhhcchhhHHHHHhhCeEEccCHHHhccccccccccCCHHHHHHHHHCCCEEEEEEECccccc--ccccCH-HHHHH
Confidence 2344432 246777778999999877665321111112346799999999999999999987321 223344 555 6
Q ss_pred H-HHhCCCcccceEecCCCCCchhhh
Q 005970 368 S-FIDNGDFSVDGVLSDFPLTPSAAV 392 (667)
Q Consensus 368 ~-li~~G~~gVDGIiTD~P~~~~~~l 392 (667)
+ ++++| |||||||+|+++++++
T Consensus 333 ~~l~~~G---VDgIiTD~P~~~~~~l 355 (356)
T 1ydy_A 333 ALYNKAG---VNGLFTDFPDKAVKFL 355 (356)
T ss_dssp HHHTTSC---CSEEEESCHHHHHHHH
T ss_pred HHHHHcC---CCEEEeCCHHHHHHhh
Confidence 5 55666 9999999999887765
No 2
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=100.00 E-value=6.1e-45 Score=373.47 Aligned_cols=242 Identities=19% Similarity=0.167 Sum_probs=191.5
Q ss_pred ccccCCCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccc
Q 005970 84 WQTLTGDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYL 163 (667)
Q Consensus 84 ~~~~~~~~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~ 163 (667)
|++..+..|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|+|++.
T Consensus 2 ~~~~~~~~p~iiaHRG~~~~~pENTl~af~~A~~~G~d--~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~----------- 68 (252)
T 3qvq_A 2 MQSAYSFLPQVIAHRGSSGQAPENTLASLHLAGQQGIK--WVEIDVMLSGDGIPVIFHDDYLSRTTDGD----------- 68 (252)
T ss_dssp CSSGGGGCCSEEEETTTTTTSCTTSHHHHHHHHHTTCS--EEEEEEEECTTSCEEECCCSBSTTTSSCC-----------
T ss_pred CcccCCCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEEECCCCcEEEECCCccccccCCC-----------
Confidence 45555667999999999999999999999999999999 99999999999999999999999999943
Q ss_pred cCCCCCCccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhC--CCceEEeccCchhhhhcCCcHHHHH
Q 005970 164 VNGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFV 241 (667)
Q Consensus 164 ~~g~~~~g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~--~~~~~ieiK~~~~~~~~~~~~~~~l 241 (667)
+.|.++||+||++|+++.|+ ++.|.+ ++||||+|+|++++ +..++||+|...... ..+++.+
T Consensus 69 --------~~v~~~t~~el~~l~~~~~~---~~~~~~--~~iptL~evl~~~~~~~~~l~iEiK~~~~~~---~~~~~~v 132 (252)
T 3qvq_A 69 --------GLIYKTPLAELKQLDAGSWK---GQEYQQ--ETIPTLLEAIEVISQYGMGLNLELKPCEGLE---EETIAAS 132 (252)
T ss_dssp --------SBGGGSCHHHHTTSCSSTTT---CGGGTT--CCCCBHHHHHHHHHHTTCEEEEEECCCTTCH---HHHHHHH
T ss_pred --------ceeecCcHHHHhcCCCCCcc---CccCCC--CcCcCHHHHHHHHhccCcEEEEEecCCCCcc---HHHHHHH
Confidence 37999999999999999875 445665 69999999999985 578999999432111 1356677
Q ss_pred HHHHhhcCC----ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHh-hcceecCCCcc
Q 005970 242 LSVSRSVVV----NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDY 316 (667)
Q Consensus 242 ~~~l~~~~~----~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~ 316 (667)
.+++++++. ++++||++..|+++++.. | +.++.+ +.... +..+ ...+.. -+.++.+.+..
T Consensus 133 ~~~l~~~~~~~~~vii~SF~~~~l~~~~~~~-p-~~~~~~-l~~~~------~~~~------~~~~~~~~~~~i~~~~~~ 197 (252)
T 3qvq_A 133 VEVLKQHWPQDLPLLFSSFNYFALVSAKALW-P-EIARGY-NVSAI------PSAW------QERLEHLDCAGLHIHQSF 197 (252)
T ss_dssp HHHHHHHSCTTSCEEEEESCHHHHHHHHHHC-T-TSCEEE-ECSSC------CTTH------HHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHhCcccCCEEEEeCCHHHHHHHHHHC-C-CCcEEE-EEecC------chhH------HHHHHHcCCeEEecchhh
Confidence 888887653 499999999999999985 3 678776 43211 1111 111111 14444443322
Q ss_pred ccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhhhhh
Q 005970 317 IWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCF 395 (667)
Q Consensus 317 ~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~~~ 395 (667)
.++.+|+.+|++|++|++||||+ .++|++++++| |||||||+|+.+++++++.
T Consensus 198 -----------~~~~~v~~~~~~G~~v~~WTvn~------------~~~~~~l~~~G---VdgIiTD~P~~~~~~l~~~ 250 (252)
T 3qvq_A 198 -----------FDVQQVSDIKAAGYKVLAFTIND------------ESLALKLYNQG---LDAVFSDYPQKIQSAIDSH 250 (252)
T ss_dssp -----------CCHHHHHHHHHTTCEEEEECCCC------------HHHHHHHHHTT---CCEEEESSHHHHHHHHHHC
T ss_pred -----------CCHHHHHHHHHCCCEEEEEcCCC------------HHHHHHHHHcC---CCEEEeCCHHHHHHHHHHh
Confidence 24779999999999999999975 37899999888 9999999999999888664
No 3
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=100.00 E-value=6.8e-45 Score=373.14 Aligned_cols=235 Identities=21% Similarity=0.189 Sum_probs=188.6
Q ss_pred CCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCC
Q 005970 90 DPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPT 169 (667)
Q Consensus 90 ~~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~ 169 (667)
-+|.||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+||||+.
T Consensus 10 ~~p~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~----------------- 70 (252)
T 2pz0_A 10 MKTLVIAHRGDSKNVPENTIAAFKRAMELGAD--GIELDVQLTKDGHLVVIHDETVDRTTNGE----------------- 70 (252)
T ss_dssp -CCEEEEETTTTTTSCTTSHHHHHHHHHHTCS--EEEEEEEECTTCCEEECSSSBSTTTSSCC-----------------
T ss_pred CCceEEEcCCCCCCCCcchHHHHHHHHHcCCC--EEEEEEEEecCCeEEEEcCCcccccCCCC-----------------
Confidence 36999999999999999999999999999999 99999999999999999999999999943
Q ss_pred CccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCC--CceEEeccCchhhhhcCCcHHHHHHHHHhh
Q 005970 170 PGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP--PGLWLNIQHDAFYAQHNLSMRSFVLSVSRS 247 (667)
Q Consensus 170 ~g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~--~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~ 247 (667)
+.|.++||+||++|+++.|+ ++.|.+ ++||||+|+|+++++ ..++||+|.+... ...+++.+++++++
T Consensus 71 --g~v~~~t~~eL~~l~~~~~~---~~~~~~--~~iPtL~evL~~~~~~~~~l~iEiK~~~~~---~~~~~~~v~~~l~~ 140 (252)
T 2pz0_A 71 --GFVKDFTLEEIKKLDAGIKF---GEKFAG--ERIPTLYEVFELIGDKDFLVNIEIKSGIVL---YPGIEEKLIKAIKE 140 (252)
T ss_dssp --SBGGGSCHHHHTTSCSSTTT---CGGGTT--CCCCBHHHHHHHHTTSCCEEEEEECCSSCC---CTTHHHHHHHHHHH
T ss_pred --cchhhCcHHHHhhcCCCCCC---CCCCCC--CcCCCHHHHHHHhhhcCCeEEEEeCCCCcc---cHHHHHHHHHHHHh
Confidence 27999999999999999875 345665 699999999999964 6899999965321 13578899999999
Q ss_pred cCC---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHh-hcceecCCCccccccCCC
Q 005970 248 VVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDYIWPVDES 323 (667)
Q Consensus 248 ~~~---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~~~~~~~~ 323 (667)
++. ++++||++..|+++++.. | +.++.+.+ .... ..+ ...++. .+.++++.+..+
T Consensus 141 ~~~~~~vii~SF~~~~l~~~~~~~-p-~~~~~~l~-~~~~------~~~------~~~~~~~~~~~i~~~~~~~------ 199 (252)
T 2pz0_A 141 YNFEERVIISSFNHYSLRDVKKMA-P-HLKIGLLY-QCGL------VEP------WHMALRMEAYSLHPFYFNI------ 199 (252)
T ss_dssp TTCTTTEEEEESBHHHHHHHHHHC-T-TSEEEEEE-CSBC------SST------HHHHHHTTCSEEEEBGGGC------
T ss_pred cCCCCCEEEEeCCHHHHHHHHHHC-C-CCCEEEEe-cCcc------ccH------HHHHHHcCCeEEecchhcC------
Confidence 875 389999999999999985 3 57777533 2110 011 111111 245555543322
Q ss_pred CCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhhhh
Q 005970 324 LYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDC 394 (667)
Q Consensus 324 ~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~~ 394 (667)
++.+|+.+|++|++|++||||++ .++++++++| |||||||+|+.++++++.
T Consensus 200 -----~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~l~~~G---vdgIiTD~P~~~~~~l~~ 250 (252)
T 2pz0_A 200 -----IPELVEGCKKNGVKLFPWTVDRK------------EDMERMIKAG---VDGIITDDPETLINLVRK 250 (252)
T ss_dssp -----CHHHHHHHHHTTCEECCBCCCSH------------HHHHHHHHHT---CSEEEESCHHHHHHHHC-
T ss_pred -----CHHHHHHHHHCCCEEEEECCCCH------------HHHHHHHHcC---CCEEEcCCHHHHHHHHhh
Confidence 47799999999999999999753 7899999888 999999999998887754
No 4
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=100.00 E-value=7.9e-45 Score=379.72 Aligned_cols=249 Identities=19% Similarity=0.241 Sum_probs=197.0
Q ss_pred ccc-ccCCCCCEEEEeCCCCCCCCccHHHHHHHH-HHcCCCCcEEEeeeeEecCCeEEEccCCCCccccccccccccccc
Q 005970 83 RWQ-TLTGDPPFVVARGGFSGIFPDSSSIAYSLT-LITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQK 160 (667)
Q Consensus 83 ~~~-~~~~~~~~iiaHRG~~~~~pENTl~a~~~A-~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~ 160 (667)
.|. +..+.+|+||||||+++.+||||++||+.| ++.|+| +||+|||+||||++||+||.+|+|||++.
T Consensus 14 ~~~~~~~~~~~~iiAHRG~~~~~PENTl~Af~~A~~~~Gad--~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~-------- 83 (287)
T 2oog_A 14 QWHTNLTNERFTTIAHRGASGYAPEHTFQAYDKSHNELKAS--YIEIDLQRTKDGHLVAMHDETVNRTTNGH-------- 83 (287)
T ss_dssp CCCCCTTSCSSEEEETTTTTTTSCSSSHHHHHHHHHTSCCS--EEEEEEEECTTCCEEECSSSBSTTTSSCC--------
T ss_pred cccccCCCCcceEEecCCCCCCCCchhHHHHHHHHHHcCCC--EEEEEeeEccCCcEEEECCChhcccCCCC--------
Confidence 444 445678999999999999999999999999 699999 99999999999999999999999999943
Q ss_pred ccccCCCCCCccccccCCHHhhccccccccccCC-----CCCCCCCCCccCCHHHHHHhhC-CCceEEeccCchhhhhcC
Q 005970 161 NYLVNGVPTPGWFSIDYTLNDLSNIILNQGVYSR-----TDKFDGNGFQILTVQDMARQIK-PPGLWLNIQHDAFYAQHN 234 (667)
Q Consensus 161 ~~~~~g~~~~g~~v~d~t~~el~~l~~~~~~~~~-----~~~~~~~~~~iptL~e~l~~~~-~~~~~ieiK~~~~~~~~~ 234 (667)
+.|.|+||+||++|+++.|+... ...|.+ ++||||+|+|++++ +.+++||+|.+...
T Consensus 84 -----------g~v~d~T~~eL~~l~~~~~f~~~~p~~~~~~~~~--~~iPtL~evL~~~~~~~~l~IEiK~~~~~---- 146 (287)
T 2oog_A 84 -----------GKVEDYTLDELKQLDAGSWFNKKYPKYARASYKN--AKVPTLDEILERYGPNANYYIETKSPDVY---- 146 (287)
T ss_dssp -----------SBGGGSCHHHHTTSCSSHHHHHHCGGGCCGGGTT--CCCCBHHHHHHHHCTTSCEEEECCCTTTS----
T ss_pred -----------eehhhCcHHHHHhcCCCcccCccCccccccccCC--ccCCCHHHHHHhhCcCceEEEEECCCCCc----
Confidence 37999999999999998775321 123444 69999999999986 47899999975421
Q ss_pred CcHHHHHHHHHhhcCC----------ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHH
Q 005970 235 LSMRSFVLSVSRSVVV----------NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIK 304 (667)
Q Consensus 235 ~~~~~~l~~~l~~~~~----------~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~ 304 (667)
..+++.++++++++++ ++|+||++..|.++++.. | +.++++ ++....... ... ..++.+.
T Consensus 147 ~~~~~~v~~~l~~~~~~~~~~~~~~~vii~SF~~~~l~~~~~~~-p-~~~~~~-l~~~~~~~~---~~~----~~~~~~~ 216 (287)
T 2oog_A 147 PGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQN-K-HVPLVK-LVDKGELQQ---FND----QRLKEIR 216 (287)
T ss_dssp TTHHHHHHHHHHHTTCSSHHHHHTTSEEEEESCHHHHHHHHHHC-T-TSCEEE-EECTTTGGG---CCH----HHHHHHH
T ss_pred chHHHHHHHHHHHcCCcccccCCCCCEEEEeCCHHHHHHHHHhC-C-CCcEEE-EecCCcccc---cCH----HHHHHHh
Confidence 2477889999998876 489999999999999985 3 678776 333221100 000 1244555
Q ss_pred hhcceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCC
Q 005970 305 TFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDF 384 (667)
Q Consensus 305 ~~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~ 384 (667)
.++.++++.+..+ ++.+|+.+|++|++|++||||++ ++|++++++| |||||||+
T Consensus 217 ~~~~~v~~~~~~~-----------~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~l~~~G---VdgIiTD~ 270 (287)
T 2oog_A 217 SYAIGLGPDYTDL-----------TEQNTHHLKDLGFIVHPYTVNEK------------ADMLRLNKYG---VDGVFTNF 270 (287)
T ss_dssp TTCSEEEEBGGGC-----------CHHHHHHHHHTTCEECCBCCCSH------------HHHHHHHHHT---CSEEEESC
T ss_pred hhheEEcccHhhc-----------CHHHHHHHHHCCCeEEEEeCCCH------------HHHHHHHHcC---CCEEEeCC
Confidence 6677777654332 46799999999999999999753 7899999888 99999999
Q ss_pred CCCchhhhhh
Q 005970 385 PLTPSAAVDC 394 (667)
Q Consensus 385 P~~~~~~l~~ 394 (667)
|+.+++++..
T Consensus 271 P~~~~~~~~~ 280 (287)
T 2oog_A 271 ADKYKEVIKE 280 (287)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 9988777643
No 5
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=100.00 E-value=7.9e-44 Score=364.20 Aligned_cols=233 Identities=15% Similarity=0.127 Sum_probs=184.8
Q ss_pred CCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCC
Q 005970 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (667)
Q Consensus 91 ~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~ 170 (667)
.|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|+|++.
T Consensus 6 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~R~t~~~------------------ 65 (247)
T 2otd_A 6 YPRIVAHRGGGKLAPENTLAAIDVGAKYGHK--MIEFDAKLSKDGEIFLLHDDNLERTSNGW------------------ 65 (247)
T ss_dssp CCSEEETTTTTTSSCSSSHHHHHHHHHTTCS--EEEEEEEECTTCCEEECSSSBSSTTSSCC------------------
T ss_pred CCeEEECCCCCCCCCchhHHHHHHHHHcCCC--EEEEEeeEccCCcEEEECCCCccccCCCC------------------
Confidence 5789999999999999999999999999999 99999999999999999999999999943
Q ss_pred ccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhC--CCceEEeccCchhhhhcCCcHHHHHHHHHhhc
Q 005970 171 GWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV 248 (667)
Q Consensus 171 g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~--~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~ 248 (667)
+.|.|+||+||++|+++.|+ .+.|.+ ++||||+|+|++++ +..++||+|.+.... ..+++.++++++++
T Consensus 66 -g~v~~~t~~eL~~l~~g~~~---~~~~~~--~~iptL~evl~~~~~~~~~l~iEiK~~~~~~---~~~~~~v~~~l~~~ 136 (247)
T 2otd_A 66 -GVAGELNWQDLLRVDAGSWY---SKAFKG--EPLPLLSQVAERCREHGMMANIEIKPTTGTG---PLTGKMVALAARQL 136 (247)
T ss_dssp -SBGGGSCHHHHTTCCSSTTT---CGGGTT--CCCCBHHHHHHHHHHTTCEEEEEECCCTTCH---HHHHHHHHHHHHHH
T ss_pred -ccHhhCcHHHHhhCCCCCcc---CCCCCC--CcCCCHHHHHHHHHhcCCEEEEEECCCCCcc---hHHHHHHHHHHHHH
Confidence 27999999999999999875 345665 69999999999985 578999999654221 12456778888765
Q ss_pred --C--CceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHh-hcceecCCCccccccCCC
Q 005970 249 --V--VNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDYIWPVDES 323 (667)
Q Consensus 249 --~--~~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~~~~~~~~ 323 (667)
+ .++++||++..|.++++.. | +.++.+ +.... +..+. +.+.. .+.++.+.+..+
T Consensus 137 ~~~~~~v~i~Sf~~~~l~~~~~~~-p-~~~~~~-l~~~~------~~~~~------~~~~~~~~~~i~~~~~~~------ 195 (247)
T 2otd_A 137 WAGMTPPLLSSFEIDALEAAQQAA-P-ELPRGL-LLDEW------RDDWR------ELTARLGCVSIHLNHKLL------ 195 (247)
T ss_dssp TTTSCCCEEEESCHHHHHHHHHHC-T-TSCEEE-EESSC------CTTHH------HHHHHHTCSEEEEEGGGC------
T ss_pred hcCcCCEEEEcCCHHHHHHHHHHC-C-CCCEEE-EecCC------cccHH------HHHHHcCCeEEecChHhC------
Confidence 3 3589999999999999985 3 577775 32211 11111 11111 145555543221
Q ss_pred CCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhhh
Q 005970 324 LYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVD 393 (667)
Q Consensus 324 ~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~ 393 (667)
++.+|+.+|++|++|++||+|++ .++++++++| |||||||+|+.+.++++
T Consensus 196 -----~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~l~~~G---vdgI~TD~p~~~~~~l~ 245 (247)
T 2otd_A 196 -----DKARVMQLKDAGLRILVYTVNKP------------QHAAELLRWG---VDCICTDAIDVIGPNFT 245 (247)
T ss_dssp -----CHHHHHHHHHTTCEEEEECCCCH------------HHHHHHHHHT---CSEEEESCTTTSCTTCC
T ss_pred -----CHHHHHHHHHCCCEEEEEccCCH------------HHHHHHHHcC---CCEEEeCCHHHHHHHHh
Confidence 47799999999999999999753 7899999888 99999999999887764
No 6
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=100.00 E-value=4.5e-43 Score=370.83 Aligned_cols=263 Identities=16% Similarity=0.160 Sum_probs=191.2
Q ss_pred CCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCC
Q 005970 90 DPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPT 169 (667)
Q Consensus 90 ~~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~ 169 (667)
.++.||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|||+... +|...
T Consensus 16 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d--~iE~DV~lTkDg~~Vv~HD~~l~rtt~~~~-----------~G~~~ 82 (313)
T 3l12_A 16 SVVRVIGHRGARGVMPENTLEGFAFTLAAGVR--ALEFDVVMTADGVPVVTHNHHLANAMTRDG-----------QGHWL 82 (313)
T ss_dssp TBCEEEEETTTTTTSCTTCHHHHHHHHHTTCC--EEEEEEEECTTSCEEECSSSBCCTTTCBCT-----------TSCBC
T ss_pred CCeEEEEcCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEEECCCCCEEEECCchhcccccccC-----------CCccc
Confidence 46889999999999999999999999999999 999999999999999999999999965321 12111
Q ss_pred --CccccccCCHHhhcccccccccc------CC--CCCCCCCCCccCCHHHHHHhhC-----CCceEEeccCchhhhhc-
Q 005970 170 --PGWFSIDYTLNDLSNIILNQGVY------SR--TDKFDGNGFQILTVQDMARQIK-----PPGLWLNIQHDAFYAQH- 233 (667)
Q Consensus 170 --~g~~v~d~t~~el~~l~~~~~~~------~~--~~~~~~~~~~iptL~e~l~~~~-----~~~~~ieiK~~~~~~~~- 233 (667)
.++.|.++||+||++|+++.+.. .+ ...+.| ++||||+|+|++++ +..++||||.+......
T Consensus 83 ~~~~~~v~~~t~~eL~~l~~~~~~~~~~~~~~~~~~~~~~g--~~iptL~evl~~~~~~~~~~~~l~IEiK~~~~~~~~~ 160 (313)
T 3l12_A 83 TGAERQVAEMTYAEIRALDVGGLDGRTVYGRRFPDQAFLTG--IHVPRLGELLDLCAGYGDQAPYLLLELKSDPALMHDH 160 (313)
T ss_dssp CSSCCBGGGSCHHHHHTSBCSSCCTTSHHHHHSTTSCCCSS--CCCCBHHHHHHHHHTTGGGCCEEEEEECCCGGGTTCH
T ss_pred CCCCcchhcCcHHHHhhCCCCCccccccccccCccccccCC--CcCCCHHHHHHHHHhcCCCCceEEEEEccCCcccccc
Confidence 12589999999999999987311 00 112233 69999999999985 46899999976432210
Q ss_pred --CCcHHHHHHHHHhhcCC---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCC------C-CCcchhHHhhcH-
Q 005970 234 --NLSMRSFVLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEP------T-TNQTYGSLLKNL- 300 (667)
Q Consensus 234 --~~~~~~~l~~~l~~~~~---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~------~-~~~~y~~~~~~l- 300 (667)
...+++.++++++++++ ++++||++..|+++++.. | ++++.+.......+.. . ....|..+...+
T Consensus 161 ~~~~~~~~~v~~~l~~~~~~~~v~i~SF~~~~l~~~~~~~-p-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 238 (313)
T 3l12_A 161 AARAEMVAAVLADVRRYRMEPRTVMHSFDWALLGECRRQA-P-DLPTSYLSQLPENADDPGEDSAKPVGPDYDRMTESLP 238 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHC-T-TSCEEEEECCCC-------------CCCTTTCCSCHH
T ss_pred ccHHHHHHHHHHHHHHcCCCCCEEEEcCCHHHHHHHHHHC-C-CCcEEEEeccccccccccccccccccccchhccccHH
Confidence 12578889999999876 399999999999999985 3 6788763321110000 0 000010000001
Q ss_pred HHHHhh-cceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccce
Q 005970 301 TFIKTF-ASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDG 379 (667)
Q Consensus 301 ~~i~~~-a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDG 379 (667)
..++.. +..+++.+.. .++++|+.+|++|++|++||||++ .+|++++++| |||
T Consensus 239 ~~~~~~~~~~~~~~~~~-----------~~~~~v~~~~~~Gl~V~~WTVn~~------------~~~~~l~~~G---VDg 292 (313)
T 3l12_A 239 QAVASAGGQLWCPYFLD-----------VTPELVAEAHDLGLIVLTWTVNEP------------EDIRRMATTG---VDG 292 (313)
T ss_dssp HHHHHHTCSEEEEBGGG-----------CCHHHHHHHHHTTCEEEEBCCCSH------------HHHHHHHHHT---CSE
T ss_pred HHHHHhCCcEEecchhc-----------CCHHHHHHHHHCCCEEEEEcCCCH------------HHHHHHHHcC---CCE
Confidence 111111 4555554322 247899999999999999999753 7899999888 999
Q ss_pred EecCCCCCchhhhhhh
Q 005970 380 VLSDFPLTPSAAVDCF 395 (667)
Q Consensus 380 IiTD~P~~~~~~l~~~ 395 (667)
||||+|+.+++++++.
T Consensus 293 IiTD~P~~~~~~l~~~ 308 (313)
T 3l12_A 293 IVTDYPGRTQRILIDM 308 (313)
T ss_dssp EEESCHHHHHHHHHHT
T ss_pred EEeCCHHHHHHHHHhc
Confidence 9999999999988764
No 7
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=100.00 E-value=2.3e-43 Score=361.20 Aligned_cols=239 Identities=14% Similarity=0.047 Sum_probs=185.1
Q ss_pred CCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCC
Q 005970 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (667)
Q Consensus 91 ~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~ 170 (667)
.|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++|+|++.
T Consensus 2 mp~iiaHRG~~~~~pENTl~af~~A~~~G~d--~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~------------------ 61 (250)
T 3ks6_A 2 MTRIASHRGGTLEFGDSTPHGFTATAAMALE--EVEFDLHPTADGAIVVHHDPTLDATTDMT------------------ 61 (250)
T ss_dssp CCEEEEETTTHHHHCTTCHHHHHHHHTSSSS--EEEEEEEECTTSCEEECSSSBSTTTBSCC------------------
T ss_pred CceEEECCCCCCCCCcchHHHHHHHHHcCCC--EEEEEEeEccCCCEEEECCCccccccCCC------------------
Confidence 4899999999999999999999999999999 99999999999999999999999999943
Q ss_pred ccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhC--CCceEEeccCchhhhhcCCcHHHHHHHHHhhc
Q 005970 171 GWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV 248 (667)
Q Consensus 171 g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~--~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~ 248 (667)
+.|.++||+||++|+++.+ . +++||||+|+|++++ +..++||+|.+.... ....+++.++++++++
T Consensus 62 -g~v~~~t~~el~~l~~~~~--------~--~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~-~~~~~~~~v~~~l~~~ 129 (250)
T 3ks6_A 62 -GAIVDMTLAKVKTATIRYG--------A--GSHPMTLEELCALYVDSHVNFRCEIKPGVDGL-PYEGFVALVIAGLERH 129 (250)
T ss_dssp -SBGGGSCHHHHHHCCBTTS--------T--TCCCEEHHHHHHHHTTCSCEEEEEECCCTTSC-CCTTHHHHHHHHHHHT
T ss_pred -CeeecCcHHHHhcCCCCCC--------C--CccCcCHHHHHHHHhccCcEEEEEeCCCcccC-cchHHHHHHHHHHHhc
Confidence 2799999999999999865 2 369999999999995 578999999643111 1236788999999998
Q ss_pred CC---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecCCCccccccCCCCC
Q 005970 249 VV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLY 325 (667)
Q Consensus 249 ~~---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~~~~~~~~~~ 325 (667)
++ .+++||++..|+++++.. | +.++.+ +.. .. .... ++..+..++...++. .+.+. +
T Consensus 130 ~~~~~v~~~SF~~~~l~~~~~~~-p-~~~~~l-~~~-~~------~~~~----~~~~~~~~~~~~~~~--~~~~~----~ 189 (250)
T 3ks6_A 130 SMLERTTFSSFLLASMDELWKAT-T-RPRLWL-VSP-SV------LQQL----GPGAVIETAIAHSIH--EIGVH----I 189 (250)
T ss_dssp TCGGGEEEEESCHHHHHHHHHHC-C-SCEEEE-ECH-HH------HHHH----HHHHHHHHHHHTTCC--EEEEE----G
T ss_pred CCCCCEEEEeCCHHHHHHHHHHC-C-CCcEEE-Eec-cc------cccc----chhHHHHHHHhcCCC--EEecc----h
Confidence 76 389999999999999985 3 566543 211 00 0000 112222222212211 11111 0
Q ss_pred CCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhhhhhh
Q 005970 326 LLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFA 396 (667)
Q Consensus 326 l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~~~~ 396 (667)
...++++|+.+|++|++|++||||++ ++|++++++| |||||||+|+.++++++...
T Consensus 190 ~~~~~~~v~~~~~~G~~V~~WTvn~~------------~~~~~l~~~G---VDgIiTD~P~~~~~~~~~~~ 245 (250)
T 3ks6_A 190 DTADAGLMAQVQAAGLDFGCWAAHTP------------SQITKALDLG---VKVFTTDRPTLAIALRTEHR 245 (250)
T ss_dssp GGCCHHHHHHHHHTTCEEEEECCCSH------------HHHHHHHHHT---CSEEEESCHHHHHHHHHHHH
T ss_pred hhCCHHHHHHHHHCCCEEEEEeCCCH------------HHHHHHHHcC---CCEEEcCCHHHHHHHHHHhh
Confidence 12257899999999999999999753 7899999888 99999999999999987664
No 8
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=9.9e-43 Score=361.12 Aligned_cols=246 Identities=14% Similarity=0.155 Sum_probs=183.9
Q ss_pred CCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCccc----ccccccccccccccccCC
Q 005970 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNA----SNIAQIFKTQQKNYLVNG 166 (667)
Q Consensus 91 ~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rt----t~~~~~~~~~~~~~~~~g 166 (667)
.+.||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+ |++.+.. +
T Consensus 8 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~r~~~~tt~g~~~~----------~ 75 (272)
T 3ch0_A 8 SFDIQGHRGCRGLLPENTIAAFTKALLLGVT--TLEFDLVISKDNRVVVSHDTFFHHEITMMVDGEDVT----------E 75 (272)
T ss_dssp TCEEEETTTTTTTSSTTSHHHHHHHHHHTCS--EEEEEEEECTTCCEEECSSSBCCTTTCCEETTEECC----------T
T ss_pred cccEEecCCCCCCCCcccHHHHHHHHHcCCC--EEEEeeeEcCCCcEEEeCCCcccccccccCCCcccc----------c
Confidence 5789999999999999999999999999999 9999999999999999999999994 4432111 1
Q ss_pred CCCCccccccCCHHhhccccccccccCCCCCCCCC---CCccCCHHHHHHhhC----CCceEEeccCchhhhh----cCC
Q 005970 167 VPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGN---GFQILTVQDMARQIK----PPGLWLNIQHDAFYAQ----HNL 235 (667)
Q Consensus 167 ~~~~g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~---~~~iptL~e~l~~~~----~~~~~ieiK~~~~~~~----~~~ 235 (667)
....++.|.|+||+||++|+++.|+ ++.|++. ..+||||+|+|++++ +..++||+|.+..... ...
T Consensus 76 ~~~~~~~v~d~t~~eL~~l~~~~~~---~~~~~~~~~~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~ 152 (272)
T 3ch0_A 76 ANEKNFNLYAMNYADIKEIDVGMKT---HPRFKSQKKVPAVKPLFRELIETAEKLSAKIQYNGEIKSTVEGDNIDHPNIA 152 (272)
T ss_dssp TTGGGSBGGGSCHHHHTTSCCSSSC---CTTCTTSCCCCCCCCBHHHHHHHHHHHCSSCEEEEEECCCGGGBTTTBCCHH
T ss_pred ccccCceeecCCHHHHHhcCCCCcc---CccCcccccCCCCCcCHHHHHHHHHHhCCCceEEEEECCCcCcccccCccHH
Confidence 1122358999999999999999876 3344431 138999999999985 5789999997653211 112
Q ss_pred cHHHHHHHHHhhcCCc---eEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecC
Q 005970 236 SMRSFVLSVSRSVVVN---YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILV 312 (667)
Q Consensus 236 ~~~~~l~~~l~~~~~~---~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~ 312 (667)
.+++.++++++++++. +++||++..|+++++.. | +.++.+.. ... ..+..+ ++.+..++.++++
T Consensus 153 ~~~~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~-p-~~~~~~l~-~~~-------~~~~~~---~~~~~~~~~~i~~ 219 (272)
T 3ch0_A 153 LFCDLVVAEIKKAHITDRFTLQSFDVRALEYMHSQY-P-DIKLSYLV-ETK-------GTLKKQ---LEKLSFTPAVYSP 219 (272)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHC-T-TSEEEEEE-CSS-------CCHHHH---HTTSSSCCSEEEE
T ss_pred HHHHHHHHHHHHcCCCCcEEEEeCCHHHHHHHHHHC-C-CCcEEEEe-cCC-------CCHHHH---HHHcCCCCcEEcc
Confidence 4678899999998763 89999999999999985 3 57777633 211 011100 0000001134444
Q ss_pred CCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchh
Q 005970 313 PKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSA 390 (667)
Q Consensus 313 ~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~ 390 (667)
.+.. .++.+|+.+|++|++|++||||++ ++|++++++| |||||||+|+.+++
T Consensus 220 ~~~~-----------~~~~~v~~~~~~Gl~v~~wTvn~~------------~~~~~l~~~G---vdgIiTD~P~~~~~ 271 (272)
T 3ch0_A 220 DVTL-----------VSKKDIDAAHKLGMRVIPWTVNTK------------EEIETLISLG---VDGIITDYPDLFFE 271 (272)
T ss_dssp BGGG-----------CCHHHHHHHHHTTCEECCBCCCSH------------HHHHHHHHHT---CSEEEESCGGGGTC
T ss_pred chhh-----------cCHHHHHHHHHcCCEEEEeccCCH------------HHHHHHHHcC---CCEEEeCCHHHHhh
Confidence 3221 247899999999999999999753 7899999888 99999999998754
No 9
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=100.00 E-value=1.3e-42 Score=357.43 Aligned_cols=238 Identities=16% Similarity=0.165 Sum_probs=185.8
Q ss_pred CCCEEEEeCCCC--CCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCC---CCccccccccccccccccccc
Q 005970 90 DPPFVVARGGFS--GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDL---KLDNASNIAQIFKTQQKNYLV 164 (667)
Q Consensus 90 ~~~~iiaHRG~~--~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~---~l~rtt~~~~~~~~~~~~~~~ 164 (667)
.+|+||||||++ +.+||||++||+.|++.|+| +||+|||+||||++||+||. +|+||||+.
T Consensus 5 ~~~~iiaHRG~~~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~~~~l~Rtt~~~------------ 70 (258)
T 2o55_A 5 IIPKIVGHRGVGKEGLAPENTLRSFVLCMERNIP--YIETDLRVCKTGEIVLFHGTPEGTIPFYKDGT------------ 70 (258)
T ss_dssp CCCEEEEETTTTTSTTSCTTCHHHHHHHHHTTCC--EEEEEEEECTTSCEEECCCSTTSBCTTSTTTT------------
T ss_pred cCceEEECCCCCCCCCCCccHHHHHHHHHHcCcC--EEEEEEEEecCCeEEEEeCCCCccceeeCCCC------------
Confidence 478999999999 99999999999999999999 99999999999999999999 999999843
Q ss_pred CCCCCCccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhC----CCceEEeccCchhhhhcCCcHHHH
Q 005970 165 NGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK----PPGLWLNIQHDAFYAQHNLSMRSF 240 (667)
Q Consensus 165 ~g~~~~g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~----~~~~~ieiK~~~~~~~~~~~~~~~ 240 (667)
+.|.++||+||++|+++. +++||||+|+|++++ +..++||+|.+.... ....+++.
T Consensus 71 -------g~v~~~t~~eL~~l~~~~------------~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~-~~~~~~~~ 130 (258)
T 2o55_A 71 -------SRIGDLSLEELKRLDVGG------------GHTIPSLEELFVAIEEQKFNLKLNLELKGEEWKR-KESGDHQR 130 (258)
T ss_dssp -------CBGGGSCHHHHTTCBSSS------------SCBCCBHHHHHHHHHHSCSCCEEEEEECCSSSSS-TTSSHHHH
T ss_pred -------eehhhCcHHHHhhcCCCC------------CCccCCHHHHHHHhhhhcCceEEEEEEccCCccc-cchHHHHH
Confidence 379999999999999862 369999999999985 578999999653210 12357889
Q ss_pred HHHHHhhcCCc---eEecCCHHHHHHHHhhhCCCCCceEEEec-cCCccCCCCCcchhHHhhcHHHHHh-hcceecCCCc
Q 005970 241 VLSVSRSVVVN---YISSPEVNFLRSIAARFRPSMTKLVFRFL-GKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKD 315 (667)
Q Consensus 241 l~~~l~~~~~~---~i~SFd~~~L~~l~~~~~~~~~~~~~~l~-~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~ 315 (667)
++++++++++. +++||++..|+++++.. | ..++.+ +. ..... .+..+ +..... .+.++++.+.
T Consensus 131 v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~-p-~~~~~~-l~~~~~~~---~~~~~------~~~~~~~~~~~v~~~~~ 198 (258)
T 2o55_A 131 LLLLVEKYHMQERVDYCSFHHEALAHLKALC-P-DVKITY-LFNYMGQP---TPLDF------VEQACYGDANGVSMLFH 198 (258)
T ss_dssp HHHHHHTTTCGGGEEEEESSHHHHHHHHHHC-T-TCEEEE-ECCTTSCC---CCTTH------HHHHHHTTCSEEEEEGG
T ss_pred HHHHHHHcCCCCCEEEEeCCHHHHHHHHHHC-C-CCcEEE-EEeCCCCC---CHHHH------HHHHHhcCCeEEecChh
Confidence 99999998763 89999999999999985 3 577775 43 21110 11111 111111 2445555432
Q ss_pred cccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhhhhh
Q 005970 316 YIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCF 395 (667)
Q Consensus 316 ~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~~~ 395 (667)
. .++.+|+.+|++|++|++|||.+. .|+..+|++++++| |||||||+|+.++++++..
T Consensus 199 ~-----------~~~~~v~~~~~~G~~v~~wTv~~~--------~n~~~~~~~l~~~G---vdgI~TD~p~~~~~~l~~~ 256 (258)
T 2o55_A 199 Y-----------LTKEQVCTAHEKGLSVTVWMPWIF--------DDSEEDWKKCLELQ---VDLICSNYPFGLMNFLSNI 256 (258)
T ss_dssp G-----------CCHHHHHHHHHTTCEEEEECCTTC--------CCCHHHHHHHHHHT---CSEEEESCHHHHHHHHTC-
T ss_pred h-----------cCHHHHHHHHHCCCEEEEeeCCCC--------CCCHHHHHHHHHcC---CCEEEeCCHHHHHHHHHHh
Confidence 2 247799999999999999999321 13458899999888 9999999999998887643
No 10
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=100.00 E-value=1.1e-42 Score=356.68 Aligned_cols=212 Identities=19% Similarity=0.201 Sum_probs=175.0
Q ss_pred CceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCC
Q 005970 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSG 485 (667)
Q Consensus 406 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g 485 (667)
-+|.||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|| ++|
T Consensus 10 ~~p~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~------------------~~g 71 (252)
T 2pz0_A 10 MKTLVIAHRGDSKNVPENTIAAFKRAMELGADGIELDVQLTKDGHLVVIHDETVDRTTN------------------GEG 71 (252)
T ss_dssp -CCEEEEETTTTTTSCTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBSTTTSS------------------CCS
T ss_pred CCceEEEcCCCCCCCCcchHHHHHHHHHcCCCEEEEEEEEecCCeEEEEcCCcccccCC------------------CCc
Confidence 35899999999999999999999999999999999999999999999999999999999 777
Q ss_pred cccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHH
Q 005970 486 IFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSV 565 (667)
Q Consensus 486 ~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v 565 (667)
. |.++||+||++|+++.++ ++.|.+ ++||||+|+|+.+++. . +.++||||.+... ...+++.+
T Consensus 72 ~-v~~~t~~eL~~l~~~~~~---------~~~~~~-~~iPtL~evL~~~~~~-~-~~l~iEiK~~~~~----~~~~~~~v 134 (252)
T 2pz0_A 72 F-VKDFTLEEIKKLDAGIKF---------GEKFAG-ERIPTLYEVFELIGDK-D-FLVNIEIKSGIVL----YPGIEEKL 134 (252)
T ss_dssp B-GGGSCHHHHTTSCSSTTT---------CGGGTT-CCCCBHHHHHHHHTTS-C-CEEEEEECCSSCC----CTTHHHHH
T ss_pred c-hhhCcHHHHhhcCCCCCC---------CCCCCC-CcCCCHHHHHHHhhhc-C-CeEEEEeCCCCcc----cHHHHHHH
Confidence 5 999999999999998653 345664 8999999999999763 2 5899999976432 13688999
Q ss_pred HHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCCcc
Q 005970 566 MEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTSSQ 644 (667)
Q Consensus 566 ~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~~~ 644 (667)
+++|+++++. ++++|+|||+++|.+++++ |++++++++.....+. ..++..+++. .+.+... ..+
T Consensus 135 ~~~l~~~~~~----~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~--------~~~~~~~~~~-~i~~~~~-~~~ 200 (252)
T 2pz0_A 135 IKAIKEYNFE----ERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVEP--------WHMALRMEAY-SLHPFYF-NII 200 (252)
T ss_dssp HHHHHHTTCT----TTEEEEESBHHHHHHHHHHCTTSEEEEEECSBCSST--------HHHHHHTTCS-EEEEBGG-GCC
T ss_pred HHHHHhcCCC----CCEEEEeCCHHHHHHHHHHCCCCCEEEEecCccccH--------HHHHHHcCCe-EEecchh-cCC
Confidence 9999999987 7999999999999999999 9999999987532111 1122333443 2332221 235
Q ss_pred HHHHHHHHHcCCcEEEEeccCC
Q 005970 645 TQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 645 ~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
+++|+.+|++|++|++||||++
T Consensus 201 ~~~v~~~~~~G~~v~~wTvn~~ 222 (252)
T 2pz0_A 201 PELVEGCKKNGVKLFPWTVDRK 222 (252)
T ss_dssp HHHHHHHHHTTCEECCBCCCSH
T ss_pred HHHHHHHHHCCCEEEEECCCCH
Confidence 7999999999999999999974
No 11
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=100.00 E-value=3.6e-42 Score=352.90 Aligned_cols=217 Identities=17% Similarity=0.179 Sum_probs=175.6
Q ss_pred cccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccc
Q 005970 402 ASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIM 481 (667)
Q Consensus 402 ~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~ 481 (667)
...++.|.||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+||
T Consensus 4 ~~~~~~p~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~----------------- 66 (252)
T 3qvq_A 4 SAYSFLPQVIAHRGSSGQAPENTLASLHLAGQQGIKWVEIDVMLSGDGIPVIFHDDYLSRTTD----------------- 66 (252)
T ss_dssp SGGGGCCSEEEETTTTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECCCSBSTTTSS-----------------
T ss_pred ccCCCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCcEEEECCCccccccC-----------------
Confidence 345667999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccH
Q 005970 482 AGSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSV 561 (667)
Q Consensus 482 ~~~g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~ 561 (667)
++|. |.++||+||++|+++.++ ++.|.+ ++||||+|+|+.+++.. +.++||||...... ..+
T Consensus 67 -~~~~-v~~~t~~el~~l~~~~~~---------~~~~~~-~~iptL~evl~~~~~~~--~~l~iEiK~~~~~~----~~~ 128 (252)
T 3qvq_A 67 -GDGL-IYKTPLAELKQLDAGSWK---------GQEYQQ-ETIPTLLEAIEVISQYG--MGLNLELKPCEGLE----EET 128 (252)
T ss_dssp -CCSB-GGGSCHHHHTTSCSSTTT---------CGGGTT-CCCCBHHHHHHHHHHTT--CEEEEEECCCTTCH----HHH
T ss_pred -CCce-eecCcHHHHhcCCCCCcc---------CccCCC-CcCcCHHHHHHHHhccC--cEEEEEecCCCCcc----HHH
Confidence 6775 999999999999998654 345665 89999999999998642 48999999643211 257
Q ss_pred HHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCC
Q 005970 562 TNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRG 640 (667)
Q Consensus 562 ~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~ 640 (667)
++.+.+++++++... ++++++|||+++|.+++++ |++++++++.....+ ...++..+++. .+.+..
T Consensus 129 ~~~v~~~l~~~~~~~---~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~--------~~~~~~~~~~~-~i~~~~- 195 (252)
T 3qvq_A 129 IAASVEVLKQHWPQD---LPLLFSSFNYFALVSAKALWPEIARGYNVSAIPSA--------WQERLEHLDCA-GLHIHQ- 195 (252)
T ss_dssp HHHHHHHHHHHSCTT---SCEEEEESCHHHHHHHHHHCTTSCEEEECSSCCTT--------HHHHHHHHTCS-EEEEEG-
T ss_pred HHHHHHHHHHhCccc---CCEEEEeCCHHHHHHHHHHCCCCcEEEEEecCchh--------HHHHHHHcCCe-EEecch-
Confidence 788899999987531 5899999999999999999 999999998642111 11223334443 222211
Q ss_pred CCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 641 TSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 641 ~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
...++++|+.+|++|++|++||||++
T Consensus 196 ~~~~~~~v~~~~~~G~~v~~WTvn~~ 221 (252)
T 3qvq_A 196 SFFDVQQVSDIKAAGYKVLAFTINDE 221 (252)
T ss_dssp GGCCHHHHHHHHHTTCEEEEECCCCH
T ss_pred hhCCHHHHHHHHHCCCEEEEEcCCCH
Confidence 13457999999999999999999974
No 12
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=100.00 E-value=1.9e-42 Score=361.70 Aligned_cols=223 Identities=21% Similarity=0.197 Sum_probs=176.5
Q ss_pred cCCceeEEEecCCCCCCCchhHHHHHHH-HHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCcccccccccc
Q 005970 404 KSANLLVISKNGASGDYPSCTNLAYQKA-ISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMA 482 (667)
Q Consensus 404 ~~~~~~iiaHRG~~~~~PENTl~Af~~A-~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~ 482 (667)
...++.||||||+++.+||||++||++| ++.|||+||+|||+||||++||+||.+|+|+||
T Consensus 20 ~~~~~~iiAHRG~~~~~PENTl~Af~~A~~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~------------------ 81 (287)
T 2oog_A 20 TNERFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTN------------------ 81 (287)
T ss_dssp TSCSSEEEETTTTTTTSCSSSHHHHHHHHHTSCCSEEEEEEEECTTCCEEECSSSBSTTTSS------------------
T ss_pred CCCcceEEecCCCCCCCCchhHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCChhcccCC------------------
Confidence 3567899999999999999999999999 699999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHH
Q 005970 483 GSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVT 562 (667)
Q Consensus 483 ~~g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~ 562 (667)
++|. |.++||+||++|+++.++... ......+.|.+ ++||||+|+|+.++.. ++++||||.+... ..++
T Consensus 82 ~~g~-v~d~T~~eL~~l~~~~~f~~~-~p~~~~~~~~~-~~iPtL~evL~~~~~~---~~l~IEiK~~~~~-----~~~~ 150 (287)
T 2oog_A 82 GHGK-VEDYTLDELKQLDAGSWFNKK-YPKYARASYKN-AKVPTLDEILERYGPN---ANYYIETKSPDVY-----PGME 150 (287)
T ss_dssp CCSB-GGGSCHHHHTTSCSSHHHHHH-CGGGCCGGGTT-CCCCBHHHHHHHHCTT---SCEEEECCCTTTS-----TTHH
T ss_pred CCee-hhhCcHHHHHhcCCCcccCcc-CccccccccCC-ccCCCHHHHHHhhCcC---ceEEEEECCCCCc-----chHH
Confidence 7775 999999999999998643100 00011223454 8999999999999654 5799999976432 2578
Q ss_pred HHHHHHHHhcCC-------CCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccch-hhhhHHHHHHHHHhhhhcCCCe
Q 005970 563 NSVMEALGNAGY-------NKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENI-RDALNQTIEDIKKFADSVVLTM 633 (667)
Q Consensus 563 ~~v~~~l~~~~~-------~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~-~~~~~~~l~~~~~~a~~i~~~~ 633 (667)
++|+++|+++++ . ++++|+|||+++|.+++++ |++++++|+.... .......++.+..++.++++.
T Consensus 151 ~~v~~~l~~~~~~~~~~~~~----~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~- 225 (287)
T 2oog_A 151 EQLLASLKKHHLLNNNKLKN----GHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPD- 225 (287)
T ss_dssp HHHHHHHHHTTCSSHHHHHT----TSEEEEESCHHHHHHHHHHCTTSCEEEEECTTTGGGCCHHHHHHHHTTCSEEEEB-
T ss_pred HHHHHHHHHcCCcccccCCC----CCEEEEeCCHHHHHHHHHhCCCCcEEEEecCCcccccCHHHHHHHhhhheEEccc-
Confidence 999999999988 5 7999999999999999999 9999999986421 112223334444444333332
Q ss_pred eEEeCCCCCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 634 SLYLKRGTSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 634 ~i~~~~~~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
. ...++++|+.+|++|++|++||||++
T Consensus 226 -----~-~~~~~~~v~~~~~~G~~v~~wTvn~~ 252 (287)
T 2oog_A 226 -----Y-TDLTEQNTHHLKDLGFIVHPYTVNEK 252 (287)
T ss_dssp -----G-GGCCHHHHHHHHHTTCEECCBCCCSH
T ss_pred -----H-hhcCHHHHHHHHHCCCeEEEEeCCCH
Confidence 1 12346899999999999999999984
No 13
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=100.00 E-value=3.3e-43 Score=359.68 Aligned_cols=229 Identities=15% Similarity=0.062 Sum_probs=183.5
Q ss_pred CEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCCCc
Q 005970 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (667)
Q Consensus 92 ~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~~g 171 (667)
|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|++.
T Consensus 2 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~Rtt~~~------------------- 60 (248)
T 1zcc_A 2 TKIVSHRGANRFAPENTFAAADLALQQGAD--YIELDVRESADGVLYVIHDETLDRTTNGT------------------- 60 (248)
T ss_dssp CEEEETTTTTTTSCSSSHHHHHHHHHTTCS--EEEEEEEECTTCCEEECSSSBTTTTSSCC-------------------
T ss_pred CeEEECCCCCCCCCchHHHHHHHHHHcCCC--EEEEEeeEcCCCCEEEECCCccccccCCC-------------------
Confidence 689999999999999999999999999999 99999999999999999999999999943
Q ss_pred cccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCC--CceEEeccCchhhhhcCCcHHHHHHHHHhhcC
Q 005970 172 WFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP--PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVV 249 (667)
Q Consensus 172 ~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~--~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~~ 249 (667)
+.|.++||+||++|+++.+ ++||||+|+|+++++ ..++||+|.+... .. .+++.+++++++++
T Consensus 61 g~v~~~t~~eL~~l~~g~~------------~~iptL~evl~~~~~~~~~l~iEiK~~~~~-~~--~~~~~v~~~l~~~~ 125 (248)
T 1zcc_A 61 GPVGHMLSSEIDTLDAGGW------------FDDRFKGAIVPRLDAYLEHLRGRAGVYIEL-KY--CDPAKVAALVRHLG 125 (248)
T ss_dssp SBSTTSCHHHHTTSCSSTT------------TCGGGTTCCCCBHHHHHHHHTTTCEEEEEE-EE--SCHHHHHHHHHHHT
T ss_pred cchhhCCHHHHHhCCCCCC------------CCCCCHHHHHHHHHhcCcEEEEEeCCCCCc-cc--HHHHHHHHHHHHhC
Confidence 2799999999999998753 499999999999864 6789999965321 11 15778999999887
Q ss_pred C---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHh-hcceecCCCccccccCCCCC
Q 005970 250 V---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDYIWPVDESLY 325 (667)
Q Consensus 250 ~---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~~~~~~~~~~ 325 (667)
+ ++++||++..|+++++.. | +.++.+ +.... . . . ...... .+.++.+.+..+
T Consensus 126 ~~~~v~i~Sf~~~~l~~~~~~~-p-~~~~~~-l~~~~--~---~--~------~~~~~~~~~~~i~~~~~~~-------- 181 (248)
T 1zcc_A 126 MVRDTFYFSFSEEMRQGLQSIA-P-EFRRMM-TLDIA--K---S--P------SLVGAVHHASIIEITPAQM-------- 181 (248)
T ss_dssp CSTTEEEECSCHHHHHHHHHHC-T-TSEEEE-EHHHH--S---S--T------HHHHHTTCCSEEEECHHHH--------
T ss_pred CCCCEEEEECCHHHHHHHHHHC-C-CCcEEE-EecCC--c---c--H------HHHHHHcCCCEEEecHHHh--------
Confidence 5 389999999999999985 3 577765 32211 0 0 0 111121 245555544332
Q ss_pred CCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHH-HHhCCCcccceEecCCCCCchhhhhhhhh
Q 005970 326 LLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLS-FIDNGDFSVDGVLSDFPLTPSAAVDCFAH 397 (667)
Q Consensus 326 l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~-li~~G~~gVDGIiTD~P~~~~~~l~~~~~ 397 (667)
.++.+|+.+|++|++|++||||++ .++++ ++++| |||||||+|+.++++++....
T Consensus 182 --~~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~~l~~~G---vdgIiTD~p~~~~~~~~~~~~ 237 (248)
T 1zcc_A 182 --RRPGIIEASRKAGLEIMVYYGGDD------------MAVHREIATSD---VDYINLDRPDLFAAVRSGMAE 237 (248)
T ss_dssp --HSHHHHHHHHHHTCEEEEECCCCC------------HHHHHHHHHSS---CSEEEESCHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHCCCEEEEECCCCH------------HHHHHHHHHcC---CCEEEECCHHHHHHHHHHhcc
Confidence 136799999999999999999865 78899 99888 999999999999998876543
No 14
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=100.00 E-value=1.1e-41 Score=355.51 Aligned_cols=245 Identities=19% Similarity=0.178 Sum_probs=187.9
Q ss_pred cccccCCCCCEEEEeCCCCC-CCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccc
Q 005970 83 RWQTLTGDPPFVVARGGFSG-IFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKN 161 (667)
Q Consensus 83 ~~~~~~~~~~~iiaHRG~~~-~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~ 161 (667)
.|...+..+|+||||||+++ .+||||++||+.|++.|+| +||+|||+||||++||+||.+++|||++.
T Consensus 23 ~~~~~~~~~~~iiaHRG~~~~~~pENTl~af~~A~~~g~d--~iE~Dv~~TkDg~~Vv~HD~~l~rtt~~~--------- 91 (292)
T 3mz2_A 23 FYQYADDRIPLISGHRGGRGKGYPENSMETFENTLSYTPA--TFEIDPRLTKDSVIVLFHDDTLERTSNGT--------- 91 (292)
T ss_dssp HTBCCTTCCCEEEEGGGCCBTTBCTTCHHHHHHHHHHCCC--EEEECEEECTTCCEEECCSSSSTTTBSCC---------
T ss_pred HHhCCCCCCCEEEECCCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEeECCCCcEEEECCchhcccCCCC---------
Confidence 34445667899999999985 7999999999999999999 99999999999999999999999999943
Q ss_pred cccCCCCCCccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCC-CceEEeccCchhhhhcCCcHHHH
Q 005970 162 YLVNGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSF 240 (667)
Q Consensus 162 ~~~~g~~~~g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~-~~~~ieiK~~~~~~~~~~~~~~~ 240 (667)
+.|.++||+||++|+++.+. ..|.+ ++||||+|+|+++++ ..++||+|... .+.
T Consensus 92 ----------g~v~~~t~~el~~l~~~~~~----~~~~~--~~iptL~evl~~~~~~~~l~iE~K~~~---------~~~ 146 (292)
T 3mz2_A 92 ----------GKVSDYTWEELQNFRLKDPE----GNITN--YRIPTLEEAIRWARGKTILILDKKDVP---------MER 146 (292)
T ss_dssp ----------SCGGGSCHHHHTTSCBBCTT----CCBCS--CCCCBHHHHHHHHTTTCCEEECCSSSC---------HHH
T ss_pred ----------CchhhCcHHHHhcCCCCCCC----CccCC--cCCCCHHHHHHHhCCCcEEEEEECCCc---------HHH
Confidence 27999999999999998653 23444 699999999999864 67999999642 257
Q ss_pred HHHHHhhcCC---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhh-------ccee
Q 005970 241 VLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF-------ASGI 310 (667)
Q Consensus 241 l~~~l~~~~~---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~-------a~~i 310 (667)
++++++++++ ++++||++..|+++++.. | +.++.+ +.. . +. .+..+... +..+
T Consensus 147 v~~~l~~~~~~~~vii~Sf~~~~l~~~~~~~-p-~~~~~~-l~~-~------~~-------~l~~~~~~g~~~~~~~~~~ 209 (292)
T 3mz2_A 147 TAQLITDMQAEPYVMITVHDGASARFFYEKN-P-NFMFEA-FVK-T------KE-------AVQDYEDNGIPWSHIMAYV 209 (292)
T ss_dssp HHHHHHHTTCTTTEEEEESSHHHHHHHHHHC-T-TCCEEE-ECC-S------HH-------HHHHHHHTTCCGGGEEEEE
T ss_pred HHHHHHHcCCCCCEEEEECCHHHHHHHHHHC-C-CCeEEE-EeC-C------HH-------HHHHHHHhCCChhheeeee
Confidence 8888998876 499999999999999985 3 577775 321 1 00 12222111 1112
Q ss_pred cCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchh
Q 005970 311 LVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSA 390 (667)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~ 390 (667)
++.+ ...++++|+.+|++|++|++||+|+..... ...|+.++|++++++| |||||||+|+.+.+
T Consensus 210 ~~~~-----------~~~~~~~V~~ah~~G~~V~vWTv~t~d~~~--~~~~~~~~~~~L~~~G---VDgIiTD~P~~l~~ 273 (292)
T 3mz2_A 210 GPKI-----------TPEVREVIDMLHERGVMCMISTAPSDDKLS--TPESRAEAYRMIIRQG---VDIIESDRPIEVAE 273 (292)
T ss_dssp ESSC-----------CHHHHHHHHHHHHTTBCEEEECTTTGGGSS--SHHHHHHHHHHHHHTT---CCEEEESCHHHHHH
T ss_pred cccc-----------cccCHHHHHHHHHCCCEEEEEeCCCcchhh--hccccHHHHHHHHHcC---CCEEEeCCHHHHHH
Confidence 2211 112467999999999999999998631000 0012357899999988 99999999999999
Q ss_pred hhhhhh
Q 005970 391 AVDCFA 396 (667)
Q Consensus 391 ~l~~~~ 396 (667)
+++...
T Consensus 274 ~L~~~~ 279 (292)
T 3mz2_A 274 AISSLI 279 (292)
T ss_dssp HHGGGS
T ss_pred HHHHhc
Confidence 998764
No 15
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=100.00 E-value=1.3e-41 Score=359.59 Aligned_cols=255 Identities=15% Similarity=0.142 Sum_probs=181.5
Q ss_pred hhcCcCcccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccc
Q 005970 396 AHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITT 475 (667)
Q Consensus 396 ~~~~~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~ 475 (667)
.++........++.||||||+++.+||||++||++|+++|||+||+|||+||||++||+||.+|+|+|+.+..
T Consensus 6 ~~~~~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d~iE~DV~lTkDg~~Vv~HD~~l~rtt~~~~~------- 78 (313)
T 3l12_A 6 SQLEGLRGHPSVVRVIGHRGARGVMPENTLEGFAFTLAAGVRALEFDVVMTADGVPVVTHNHHLANAMTRDGQ------- 78 (313)
T ss_dssp GGGGGTCCBTTBCEEEEETTTTTTSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECSSSBCCTTTCBCTT-------
T ss_pred ccccccccCCCCeEEEEcCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEECCchhcccccccCC-------
Confidence 3444445566779999999999999999999999999999999999999999999999999999999753210
Q ss_pred cccccccCCCcccccCCHHHHcccCCCccCCccccc--ccCCCCCCCCccccCHHHHHHHHHhcC-CcceEEEEeecchh
Q 005970 476 TIPEIMAGSGIFSFSLIWDEIQTLIPQISNPYFKFK--LFRNPKNKNAGKFMKLSDFLEMAKNAN-SLSGVLISIENAVY 552 (667)
Q Consensus 476 ~~~~~~~~~g~~i~d~t~~EL~~L~~~~~~p~~~~~--~~~~~~~~~~~~iPtL~EvL~~~~~~~-~~~~l~iEiK~~~~ 552 (667)
..+..+.+..|.++||+||++|+++.+.+..|++ .+....+.| ++||||+|+|+.+++.+ ..++++||||.+..
T Consensus 79 --G~~~~~~~~~v~~~t~~eL~~l~~~~~~~~~~~~~~~~~~~~~~g-~~iptL~evl~~~~~~~~~~~~l~IEiK~~~~ 155 (313)
T 3l12_A 79 --GHWLTGAERQVAEMTYAEIRALDVGGLDGRTVYGRRFPDQAFLTG-IHVPRLGELLDLCAGYGDQAPYLLLELKSDPA 155 (313)
T ss_dssp --SCBCCSSCCBGGGSCHHHHHTSBCSSCCTTSHHHHHSTTSCCCSS-CCCCBHHHHHHHHHTTGGGCCEEEEEECCCGG
T ss_pred --CcccCCCCcchhcCcHHHHhhCCCCCccccccccccCccccccCC-CcCCCHHHHHHHHHhcCCCCceEEEEEccCCc
Confidence 0000111235999999999999998632211111 111122343 89999999999998731 02589999997654
Q ss_pred hhh--hhcccHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchh--h---hhHH--HH---
Q 005970 553 LAE--KQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIR--D---ALNQ--TI--- 619 (667)
Q Consensus 553 ~~~--~~~~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~--~---~~~~--~l--- 619 (667)
... .....++++|+++|+++++. ++++|+|||+++|.+++++ |++++++|+..... + .... .+
T Consensus 156 ~~~~~~~~~~~~~~v~~~l~~~~~~----~~v~i~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 231 (313)
T 3l12_A 156 LMHDHAARAEMVAAVLADVRRYRME----PRTVMHSFDWALLGECRRQAPDLPTSYLSQLPENADDPGEDSAKPVGPDYD 231 (313)
T ss_dssp GTTCHHHHHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHCTTSCEEEEECCCC-------------CCCTT
T ss_pred cccccccHHHHHHHHHHHHHHcCCC----CCEEEEcCCHHHHHHHHHHCCCCcEEEEeccccccccccccccccccccch
Confidence 210 01136899999999999987 7999999999999999999 99999999875321 0 0000 00
Q ss_pred ---HHHHHhhhhcCCCeeEEeCCCCCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 620 ---EDIKKFADSVVLTMSLYLKRGTSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 620 ---~~~~~~a~~i~~~~~i~~~~~~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
..+..++..+++. .+.+.. ...++++|+.+|++|++|++||||++
T Consensus 232 ~~~~~l~~~~~~~~~~-~~~~~~-~~~~~~~v~~~~~~Gl~V~~WTVn~~ 279 (313)
T 3l12_A 232 RMTESLPQAVASAGGQ-LWCPYF-LDVTPELVAEAHDLGLIVLTWTVNEP 279 (313)
T ss_dssp TCCSCHHHHHHHHTCS-EEEEBG-GGCCHHHHHHHHHTTCEEEEBCCCSH
T ss_pred hccccHHHHHHHhCCc-EEecch-hcCCHHHHHHHHHCCCEEEEEcCCCH
Confidence 0011222233433 233221 13457999999999999999999984
No 16
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=100.00 E-value=1.5e-41 Score=347.24 Aligned_cols=213 Identities=16% Similarity=0.091 Sum_probs=171.1
Q ss_pred CceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCC
Q 005970 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSG 485 (667)
Q Consensus 406 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g 485 (667)
+.|.||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|| ++|
T Consensus 5 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~R~t~------------------~~g 66 (247)
T 2otd_A 5 PYPRIVAHRGGGKLAPENTLAAIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNLERTSN------------------GWG 66 (247)
T ss_dssp CCCSEEETTTTTTSSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBSSTTSS------------------CCS
T ss_pred CCCeEEECCCCCCCCCchhHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCccccCC------------------CCc
Confidence 45789999999999999999999999999999999999999999999999999999999 777
Q ss_pred cccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHH
Q 005970 486 IFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSV 565 (667)
Q Consensus 486 ~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v 565 (667)
. |.++||+||++|+++.++ ++.|.+ ++||||+|+|+.+++.. +.++||||.+.... ..+++.+
T Consensus 67 ~-v~~~t~~eL~~l~~g~~~---------~~~~~~-~~iptL~evl~~~~~~~--~~l~iEiK~~~~~~----~~~~~~v 129 (247)
T 2otd_A 67 V-AGELNWQDLLRVDAGSWY---------SKAFKG-EPLPLLSQVAERCREHG--MMANIEIKPTTGTG----PLTGKMV 129 (247)
T ss_dssp B-GGGSCHHHHTTCCSSTTT---------CGGGTT-CCCCBHHHHHHHHHHTT--CEEEEEECCCTTCH----HHHHHHH
T ss_pred c-HhhCcHHHHhhCCCCCcc---------CCCCCC-CcCCCHHHHHHHHHhcC--CEEEEEECCCCCcc----hHHHHHH
Confidence 5 999999999999998653 345665 89999999999998542 48999999765421 2467889
Q ss_pred HHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCCcc
Q 005970 566 MEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTSSQ 644 (667)
Q Consensus 566 ~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~~~ 644 (667)
+++|+++... . ++++|+||+++.|..++++ |++++++++.....+. ..++..+++. .+.+... ..+
T Consensus 130 ~~~l~~~~~~-~--~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~--------~~~~~~~~~~-~i~~~~~-~~~ 196 (247)
T 2otd_A 130 ALAARQLWAG-M--TPPLLSSFEIDALEAAQQAAPELPRGLLLDEWRDDW--------RELTARLGCV-SIHLNHK-LLD 196 (247)
T ss_dssp HHHHHHHTTT-S--CCCEEEESCHHHHHHHHHHCTTSCEEEEESSCCTTH--------HHHHHHHTCS-EEEEEGG-GCC
T ss_pred HHHHHHHhcC-c--CCEEEEcCCHHHHHHHHHHCCCCCEEEEecCCcccH--------HHHHHHcCCe-EEecChH-hCC
Confidence 9999887211 1 3899999999999999999 9999999987422111 1122333443 2222111 235
Q ss_pred HHHHHHHHHcCCcEEEEeccCC
Q 005970 645 TQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 645 ~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
+++|+.+|++|++|++||||++
T Consensus 197 ~~~v~~~~~~G~~v~~wTvn~~ 218 (247)
T 2otd_A 197 KARVMQLKDAGLRILVYTVNKP 218 (247)
T ss_dssp HHHHHHHHHTTCEEEEECCCCH
T ss_pred HHHHHHHHHCCCEEEEEccCCH
Confidence 7999999999999999999974
No 17
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=100.00 E-value=1e-41 Score=349.04 Aligned_cols=213 Identities=10% Similarity=0.034 Sum_probs=174.5
Q ss_pred ceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCc
Q 005970 407 NLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGI 486 (667)
Q Consensus 407 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~ 486 (667)
.|+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|+ ++|.
T Consensus 2 mp~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~------------------~~g~ 63 (250)
T 3ks6_A 2 MTRIASHRGGTLEFGDSTPHGFTATAAMALEEVEFDLHPTADGAIVVHHDPTLDATTD------------------MTGA 63 (250)
T ss_dssp CCEEEEETTTHHHHCTTCHHHHHHHHTSSSSEEEEEEEECTTSCEEECSSSBSTTTBS------------------CCSB
T ss_pred CceEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEEEeEccCCCEEEECCCccccccC------------------CCCe
Confidence 3789999999999999999999999999999999999999999999999999999999 6775
Q ss_pred ccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHH
Q 005970 487 FSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVM 566 (667)
Q Consensus 487 ~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~ 566 (667)
|.++||+||++|+++.+ . +++||||+|+|+.+++.+ +.++||||.+.... ....++++++
T Consensus 64 -v~~~t~~el~~l~~~~~--------------~-~~~iptL~evl~~~~~~~--~~l~iEiK~~~~~~--~~~~~~~~v~ 123 (250)
T 3ks6_A 64 -IVDMTLAKVKTATIRYG--------------A-GSHPMTLEELCALYVDSH--VNFRCEIKPGVDGL--PYEGFVALVI 123 (250)
T ss_dssp -GGGSCHHHHHHCCBTTS--------------T-TCCCEEHHHHHHHHTTCS--CEEEEEECCCTTSC--CCTTHHHHHH
T ss_pred -eecCcHHHHhcCCCCCC--------------C-CccCcCHHHHHHHHhccC--cEEEEEeCCCcccC--cchHHHHHHH
Confidence 99999999999999853 1 389999999999997532 58999999753210 1236899999
Q ss_pred HHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCCccH
Q 005970 567 EALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTSSQT 645 (667)
Q Consensus 567 ~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~~~~ 645 (667)
++|+++++. ++++++|||++.|.+++++ |+++++++..... ....+..+..++..+++. .+.+.. ...++
T Consensus 124 ~~l~~~~~~----~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~ 194 (250)
T 3ks6_A 124 AGLERHSML----ERTTFSSFLLASMDELWKATTRPRLWLVSPSVL---QQLGPGAVIETAIAHSIH-EIGVHI-DTADA 194 (250)
T ss_dssp HHHHHTTCG----GGEEEEESCHHHHHHHHHHCCSCEEEEECHHHH---HHHHHHHHHHHHHHTTCC-EEEEEG-GGCCH
T ss_pred HHHHhcCCC----CCEEEEeCCHHHHHHHHHHCCCCcEEEEecccc---cccchhHHHHHHHhcCCC-EEecch-hhCCH
Confidence 999999987 7999999999999999999 9999987764211 111233344556666664 233221 23467
Q ss_pred HHHHHHHHcCCcEEEEeccCC
Q 005970 646 QLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 646 ~~v~~ah~~Gl~V~vWTVn~e 666 (667)
++|+.+|++|++|++||||++
T Consensus 195 ~~v~~~~~~G~~V~~WTvn~~ 215 (250)
T 3ks6_A 195 GLMAQVQAAGLDFGCWAAHTP 215 (250)
T ss_dssp HHHHHHHHTTCEEEEECCCSH
T ss_pred HHHHHHHHCCCEEEEEeCCCH
Confidence 999999999999999999984
No 18
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=100.00 E-value=6.8e-42 Score=347.70 Aligned_cols=225 Identities=16% Similarity=0.159 Sum_probs=178.5
Q ss_pred CCCEEEEeCCC--CCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCC
Q 005970 90 DPPFVVARGGF--SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGV 167 (667)
Q Consensus 90 ~~~~iiaHRG~--~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~ 167 (667)
.+|.||||||+ ++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++| .
T Consensus 3 ~~~~iiaHRG~~~~~~~pENTl~Af~~A~~~G~d--~iE~DV~lT~Dg~~Vv~HD~~l~~--~----------------- 61 (238)
T 3no3_A 3 DNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAY--GSEFDVHLTADNVLVVYHDNDIQG--K----------------- 61 (238)
T ss_dssp CCCEEEETTSSCSSTTCCTTSHHHHHHHHHTTCS--EEEEEEEECTTSCEEECSSSEETT--E-----------------
T ss_pred CCCeEEeCCCCCCCCCCCccHHHHHHHHHHcCCC--EEEEEeeEccCCcEEEECCCCCCC--C-----------------
Confidence 46899999999 689999999999999999999 999999999999999999999986 1
Q ss_pred CCCccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhC---CCceEEeccCchhhhhcCCcHHHHHHHH
Q 005970 168 PTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK---PPGLWLNIQHDAFYAQHNLSMRSFVLSV 244 (667)
Q Consensus 168 ~~~g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~---~~~~~ieiK~~~~~~~~~~~~~~~l~~~ 244 (667)
.|.++||+||++|+++. +++||||+|+|++++ +..++||+|.+.... ....+++.++++
T Consensus 62 -----~v~~~t~~el~~l~~~~------------~~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~-~~~~~~~~v~~~ 123 (238)
T 3no3_A 62 -----HIQSCTYDELKDLQLSN------------GEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPE-RNRDAARLSVQM 123 (238)
T ss_dssp -----EGGGSCHHHHTTCBCTT------------SCBCCBHHHHHHHHHHCTTCEEEEEECCCSSHH-HHHHHHHHHHHH
T ss_pred -----ChHhCCHHHHhhCCCCC------------CCcCCcHHHHHHHHhhcCCceEEEEeCCCCCcc-hhHHHHHHHHHH
Confidence 68999999999999763 369999999999985 368999999654221 112477889999
Q ss_pred HhhcCC---ceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHh-hcceecCCCcccccc
Q 005970 245 SRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDYIWPV 320 (667)
Q Consensus 245 l~~~~~---~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~~~~~ 320 (667)
++++++ ++++||++..|.++++.. | +.++.+ +.... . ...++. .+.++.+.+..+
T Consensus 124 l~~~~~~~~v~~~Sf~~~~l~~~~~~~-p-~~~~~~-l~~~~--~-------------~~~~~~~~~~~~~~~~~~~--- 182 (238)
T 3no3_A 124 VKRMKLAKRTDYISFNMDACKEFIRLC-P-KSEVSY-LNGEL--S-------------PMELKELGFTGLDYHYKVL--- 182 (238)
T ss_dssp HHHTTCGGGEEEEESCHHHHHHHHHHC-T-TSCEEE-CSSCS--C-------------HHHHHHTTCCEEEEEHHHH---
T ss_pred HHHcCCcCCEEEEECCHHHHHHHHHHC-C-CCeEEE-EeCCC--C-------------HHHHHHCCCceEeccHHhh---
Confidence 999876 389999999999999986 3 577775 32211 0 111221 133343322211
Q ss_pred CCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhhhhh
Q 005970 321 DESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCF 395 (667)
Q Consensus 321 ~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~~~ 395 (667)
..++++|+.+|++|++|++||||++ .+|++++++| |||||||+|+.+++++++.
T Consensus 183 ------~~~~~~v~~~~~~G~~v~~WTVn~~------------~~~~~l~~~G---VdgIiTD~P~~~~~~l~~r 236 (238)
T 3no3_A 183 ------QSHPDWVKDCKVLGMTSNVWTVDDP------------KLMEEMIDMG---VDFITTDLPEETQKILHSR 236 (238)
T ss_dssp ------HHSTTHHHHHHHTTCEEEEECCCSH------------HHHHHHHHHT---CSEEEESCHHHHHHHHHHH
T ss_pred ------hCCHHHHHHHHHCCCEEEEECCCCH------------HHHHHHHHcC---CCEEECCCHHHHHHHHHhc
Confidence 1135699999999999999999753 7899999888 9999999999999988765
No 19
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=100.00 E-value=1.2e-41 Score=366.02 Aligned_cols=253 Identities=20% Similarity=0.223 Sum_probs=186.9
Q ss_pred CCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCC
Q 005970 405 SANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGS 484 (667)
Q Consensus 405 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~ 484 (667)
+.++.||||||+++.+||||++||++|+++|||+||+|||+||||++||+||.+|+|+||+.. .|++|.+. .++
T Consensus 28 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~-~f~~~~~~-----~g~ 101 (356)
T 1ydy_A 28 SNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVAD-RFPDRARK-----DGR 101 (356)
T ss_dssp -CCCEEEETTTTTTTSSTTCHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBCTTTBSHHH-HSTTCCCT-----TSC
T ss_pred CCCceEEEeCCCCCCCCcchHHHHHHHHHcCCCEEEeeeEECCCCcEEEeCCChHHhhcCccc-cccccccc-----CCC
Confidence 567899999999999999999999999999999999999999999999999999999998543 36655431 245
Q ss_pred CcccccCCHHHHcccCCCccCCcc-cc----cccCCCCCCCCccccCHHHHHHHHHhc----CCcceEEEEeecchhhhh
Q 005970 485 GIFSFSLIWDEIQTLIPQISNPYF-KF----KLFRNPKNKNAGKFMKLSDFLEMAKNA----NSLSGVLISIENAVYLAE 555 (667)
Q Consensus 485 g~~i~d~t~~EL~~L~~~~~~p~~-~~----~~~~~~~~~~~~~iPtL~EvL~~~~~~----~~~~~l~iEiK~~~~~~~ 555 (667)
|. |.++||+||++|+++.++.-. +. ...+.+.+.++++||||+|+|+++++. +..++++||||.+....
T Consensus 102 ~~-v~d~T~~eL~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~iptL~evl~~~~~~~~~~~~~~~l~iEiK~~~~~~- 179 (356)
T 1ydy_A 102 YY-AIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHH- 179 (356)
T ss_dssp CB-GGGSCHHHHHHSCBCSCEEEETTEEEESSTTSSCTTCSCCCCCBHHHHHHHHHHHHHHHSCCCEEEEEECCHHHHH-
T ss_pred cc-hhhCcHHHHHhCCCCccccccccccccccccccccccCCCcCCCHHHHHHHHHHhhhcccCCceEEEeecCccccc-
Confidence 54 999999999999998653100 00 000111112358999999999999862 11258999999876432
Q ss_pred hhcccHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc------cCCcEEEEeccch------------------
Q 005970 556 KQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK------TSYELVYKVKENI------------------ 611 (667)
Q Consensus 556 ~~~~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~------p~~~~~~L~~~~~------------------ 611 (667)
..+..++++|+++|+++++... .++++|+|||+++|+++|++ |++++++|+....
T Consensus 180 ~~~~~~~~~v~~~l~~~~~~~~-~~~v~i~SF~~~~l~~~~~~~~p~~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 258 (356)
T 1ydy_A 180 QEGKDIAAKTLEVLKKYGYTGK-DDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNY 258 (356)
T ss_dssp HTTCCHHHHHHHHHHHTTCCST-TSSBEEEESCHHHHHHHHHTHHHHHTCCCEEEEEECCGGGCCCEEECTTSCEEECCC
T ss_pred ccchhHHHHHHHHHHHcCCCCC-CCCEEEEcCCHHHHHHHHhhcccccCCCceEEEEeccCcccccccccccccccccch
Confidence 1335689999999999998421 16899999999999999996 7899999986321
Q ss_pred hh-hhHHHHHHHHHhhhhcCCC-eeEEeCC---CCCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 612 RD-ALNQTIEDIKKFADSVVLT-MSLYLKR---GTSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 612 ~~-~~~~~l~~~~~~a~~i~~~-~~i~~~~---~~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
.. ..+..+.++..+++.++++ ..+.+.. ....++++|+.+|++|++|++||||++
T Consensus 259 ~~~~~~~~l~~~~~~a~~i~p~~~~~~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~ 318 (356)
T 1ydy_A 259 DWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSD 318 (356)
T ss_dssp GGGGSTTHHHHHTTTCSEEEEBGGGTBCTTCBTTBCCBCSHHHHHHHTTCEECCBCBCTT
T ss_pred hhhcchhhHHHHHhhCeEEccCHHHhccccccccccCCHHHHHHHHHCCCEEEEEEECcc
Confidence 00 1123455556667666665 2222100 011336899999999999999999974
No 20
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=6.7e-41 Score=347.36 Aligned_cols=228 Identities=15% Similarity=0.136 Sum_probs=173.5
Q ss_pred CceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCccccc----ccCCCCccCCccccccccc
Q 005970 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINS----TNAAQSKFNSITTTIPEIM 481 (667)
Q Consensus 406 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~----t~v~~~~~~~~~~~~~~~~ 481 (667)
.++.||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+ |+-. ... +.
T Consensus 7 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~r~~~~tt~g~---------~~~-~~ 76 (272)
T 3ch0_A 7 ASFDIQGHRGCRGLLPENTIAAFTKALLLGVTTLEFDLVISKDNRVVVSHDTFFHHEITMMVDGE---------DVT-EA 76 (272)
T ss_dssp TTCEEEETTTTTTTSSTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBCCTTTCCEETTE---------ECC-TT
T ss_pred ccccEEecCCCCCCCCcccHHHHHHHHHcCCCEEEEeeeEcCCCcEEEeCCCcccccccccCCCc---------ccc-cc
Confidence 457899999999999999999999999999999999999999999999999999994 3300 000 00
Q ss_pred cCCCcccccCCHHHHcccCCCccCCcccccccCCCCCCC----CccccCHHHHHHHHHhcCCcceEEEEeecchhhhh--
Q 005970 482 AGSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKN----AGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAE-- 555 (667)
Q Consensus 482 ~~~g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~----~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~-- 555 (667)
.+.+..|.++||+||++|+++.++ ++.|.+ ..+||||+|+|+++++.+..+.++||||.+.....
T Consensus 77 ~~~~~~v~d~t~~eL~~l~~~~~~---------~~~~~~~~~~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~~~~ 147 (272)
T 3ch0_A 77 NEKNFNLYAMNYADIKEIDVGMKT---------HPRFKSQKKVPAVKPLFRELIETAEKLSAKIQYNGEIKSTVEGDNID 147 (272)
T ss_dssp TGGGSBGGGSCHHHHTTSCCSSSC---------CTTCTTSCCCCCCCCBHHHHHHHHHHHCSSCEEEEEECCCGGGBTTT
T ss_pred cccCceeecCCHHHHHhcCCCCcc---------CccCcccccCCCCCcCHHHHHHHHHHhCCCceEEEEECCCcCccccc
Confidence 122335999999999999998754 123332 13899999999999874222589999997653110
Q ss_pred -hhcccHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCC-
Q 005970 556 -KQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLT- 632 (667)
Q Consensus 556 -~~~~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~- 632 (667)
.....++++++++|+++++. ++++|+|||+++|.+++++ |++++++++... .+ +..++..+++.
T Consensus 148 ~~~~~~~~~~v~~~l~~~~~~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~-~~--------~~~~~~~~~~~~ 214 (272)
T 3ch0_A 148 HPNIALFCDLVVAEIKKAHIT----DRFTLQSFDVRALEYMHSQYPDIKLSYLVETK-GT--------LKKQLEKLSFTP 214 (272)
T ss_dssp BCCHHHHHHHHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHCTTSEEEEEECSS-CC--------HHHHHTTSSSCC
T ss_pred CccHHHHHHHHHHHHHHcCCC----CcEEEEeCCHHHHHHHHHHCCCCcEEEEecCC-CC--------HHHHHHHcCCCC
Confidence 01124789999999999987 7999999999999999999 999999998742 11 11233444542
Q ss_pred eeEEeCCCCCccHHHHHHHHHcCCcEEEEeccCC
Q 005970 633 MSLYLKRGTSSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 633 ~~i~~~~~~~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
..+.+... ..++++|+.+|++|++|++||||++
T Consensus 215 ~~i~~~~~-~~~~~~v~~~~~~Gl~v~~wTvn~~ 247 (272)
T 3ch0_A 215 AVYSPDVT-LVSKKDIDAAHKLGMRVIPWTVNTK 247 (272)
T ss_dssp SEEEEBGG-GCCHHHHHHHHHTTCEECCBCCCSH
T ss_pred cEEccchh-hcCHHHHHHHHHcCCEEEEeccCCH
Confidence 23433222 2357999999999999999999984
No 21
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=100.00 E-value=1.5e-40 Score=334.84 Aligned_cols=215 Identities=14% Similarity=0.053 Sum_probs=170.5
Q ss_pred CCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCC
Q 005970 90 DPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPT 169 (667)
Q Consensus 90 ~~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~ 169 (667)
.+|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+++ +
T Consensus 6 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d--~iE~DV~lT~Dg~lVv~HD~~l~---~------------------- 61 (224)
T 1vd6_A 6 QRPLRLGHRGAPLKAKENTLESFRLALEAGLD--GVELDVWPTRDGVFAVRHDPDTP---L------------------- 61 (224)
T ss_dssp -CCEEEEETSCTTTSCTTSHHHHHHHHHTTCS--EEEEEEEECTTSCEEECSCSEET---T-------------------
T ss_pred CCceEEECCCCCCCCCcchHHHHHHHHHcCCC--EEEEEeeEecCCcEEEECCCccC---C-------------------
Confidence 46899999999999999999999999999999 99999999999999999999997 2
Q ss_pred CccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhC---CCceEEeccCchhhhhcCCcHHHHHHHHHh
Q 005970 170 PGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK---PPGLWLNIQHDAFYAQHNLSMRSFVLSVSR 246 (667)
Q Consensus 170 ~g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~---~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~ 246 (667)
+.|.++||+||++|+ ++||||+|+|++++ +..++||+|.+.... ..+++.++++++
T Consensus 62 --g~v~~~t~~eL~~l~----------------~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~---~~~~~~v~~~l~ 120 (224)
T 1vd6_A 62 --GPVFQVDYADLKAQE----------------PDLPRLEEVLALKEAFPQAVFNVELKSFPGLG---EEAARRLAALLR 120 (224)
T ss_dssp --EEGGGSCHHHHHHHS----------------TTCCBHHHHHGGGGTCTTCEEEEEECCCTTSH---HHHHHHHHHHTT
T ss_pred --CChhhCCHHHHHhcC----------------CCCCCHHHHHHhhhccCCceEEEEECCCCCcc---HHHHHHHHHHHh
Confidence 168999999999887 28999999999997 367999999653211 135678888888
Q ss_pred hcCCceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecCCCccccccCCCCCC
Q 005970 247 SVVVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYL 326 (667)
Q Consensus 247 ~~~~~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~~~~~~~~~~~~l 326 (667)
+.+.++++||++..|.++++.. | +.++.+ +..... . .. ++. ..+.++++.+..
T Consensus 121 ~~~~v~i~Sf~~~~l~~~~~~~-p-~~~~~~-l~~~~~------~---~~---~~~--~~~~~i~~~~~~---------- 173 (224)
T 1vd6_A 121 GREGVWVSSFDPLALLALRKAA-P-GLPLGF-LMAEDH------S---AL---LPC--LGVEAVHPHHAL---------- 173 (224)
T ss_dssp TCSSEEEEESCHHHHHHHHHHC-T-TSCEEE-EESSCC------G---GG---GGG--SCCSEEEEBGGG----------
T ss_pred cCCcEEEEeCCHHHHHHHHHHC-C-CCCEEE-Eecccc------H---HH---HHH--cCCcEEecCccc----------
Confidence 8555699999999999999985 3 577775 322110 0 00 000 124445443322
Q ss_pred CCChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhh
Q 005970 327 LPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAV 392 (667)
Q Consensus 327 ~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l 392 (667)
.++.+++.+|++|++|++||||+ ..++++++++| ||||+||+|+.+++++
T Consensus 174 -~~~~~v~~~~~~G~~v~~wtvn~------------~~~~~~l~~~G---vdgI~TD~p~~~~~~~ 223 (224)
T 1vd6_A 174 -VTEEAVAGWRKRGLFVVAWTVNE------------EGEARRLLALG---LDGLIGDRPEVLLPLG 223 (224)
T ss_dssp -CCHHHHHHHHHTTCEEEEECCCC------------HHHHHHHHHTT---CSEEEESCHHHHTTSC
T ss_pred -CCHHHHHHHHHCCCEEEEEeCCC------------HHHHHHHHhcC---CCEEEcCCHHHHHHhc
Confidence 24779999999999999999975 37899999888 9999999999877654
No 22
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=100.00 E-value=6.5e-41 Score=339.62 Aligned_cols=222 Identities=17% Similarity=0.181 Sum_probs=172.2
Q ss_pred CCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCCCC
Q 005970 90 DPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPT 169 (667)
Q Consensus 90 ~~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~~~ 169 (667)
..++||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+||||+.
T Consensus 11 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~----------------- 71 (234)
T 1o1z_A 11 HHVIVLGHRGYSAKYLENTLEAFMKAIEAGAN--GVELDVRLSKDGKVVVSHDEDLKRLFGLD----------------- 71 (234)
T ss_dssp CCCEEEEETTTTTTSCTTSHHHHHHHHHTTCS--EEEEEEEECTTSCEEECSSSEEHHHHCEE-----------------
T ss_pred ceEEEEEcCCCCCCCCCchHHHHHHHHHcCCC--EEEEEeeEecCCCEEEEcCCcHHhcCCcC-----------------
Confidence 46899999999999999999999999999999 99999999999999999999999999953
Q ss_pred CccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCC-CceEEeccCchhhhhcCCcHHHHHHHHHhhc
Q 005970 170 PGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV 248 (667)
Q Consensus 170 ~g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~-~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~~ 248 (667)
+.|.++||+||++|+ + ++||||+|+|+++++ ..++||+|.+. .++.+++++++.
T Consensus 72 --g~v~d~T~~eL~~l~-------------~--~~iptL~evL~~~~~~~~l~iEiK~~~--------~~~~v~~~l~~~ 126 (234)
T 1o1z_A 72 --VKIRDATVSELKELT-------------D--GKITTLKEVFENVSDDKIINIEIKERE--------AADAVLEISKKR 126 (234)
T ss_dssp --EEGGGSCHHHHHHHT-------------T--TCCCBHHHHHHHSCTTSEEEEEECCGG--------GHHHHHHHHTTC
T ss_pred --cCcccCcHHHHhcCC-------------C--CCCCCHHHHHHhcccCCeEEEEeCCcc--------HHHHHHHHHhcc
Confidence 379999999999988 2 499999999999975 78999999653 356788888874
Q ss_pred CCceEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHH-hhcceecCCCccccccCCCCCCC
Q 005970 249 VVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIK-TFASGILVPKDYIWPVDESLYLL 327 (667)
Q Consensus 249 ~~~~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~-~~a~~i~~~~~~~~~~~~~~~l~ 327 (667)
+.++++||+ |+++++.. | +.++.+ +...... ..+..+ +..+. .+..++.+.+..+. +.
T Consensus 127 ~~vii~Sf~---l~~~~~~~-p-~~~~~~-l~~~~~~-----~~~~~~---~~~~~~~~~~~i~~~~~~~g-------~~ 185 (234)
T 1o1z_A 127 KNLIFSSFD---LDLLDEKF-K-GTKYGY-LIDEENY-----GSIENF---VERVEKERPYSLHVPYQAFE-------LE 185 (234)
T ss_dssp CSEEEEESC---HHHHHHHC-T-TSCEEE-ECCTTTT-----CSHHHH---HHHHHHHCCSEEEEEGGGGG-------SH
T ss_pred CCEEEEchh---HHHHHhhC-C-CCcEEE-Eeccccc-----cCHHHH---HHHcCCCCCCEEEeCHHHhc-------CC
Confidence 456999999 88898885 3 677775 3322110 011111 11221 12255665544330 00
Q ss_pred CChHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhh
Q 005970 328 PHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAV 392 (667)
Q Consensus 328 ~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l 392 (667)
..+.+++.+|++|++|++||||++ ++|++++ ++ ||||+||+|+.+++++
T Consensus 186 ~~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~l~---~~-vdgIiTD~P~~~~~~~ 234 (234)
T 1o1z_A 186 YAVEVLRSFRKKGIVIFVWTLNDP------------EIYRKIR---RE-IDGVITDEVELFVKLR 234 (234)
T ss_dssp HHHHHHHHHHHTTCEEEEESCCCH------------HHHHHHG---GG-CSEEEESCHHHHHHTC
T ss_pred ccHHHHHHHHHcCCEEEEeCCCCH------------HHHHHHH---Hh-CCEEEcCCHHHHhhcC
Confidence 116799999999999999999753 7888888 56 9999999999877653
No 23
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=100.00 E-value=1.9e-40 Score=341.42 Aligned_cols=212 Identities=10% Similarity=0.053 Sum_probs=170.8
Q ss_pred CCceeEEEecCCC--CCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccC---cccccccCCCCccCCccccccc
Q 005970 405 SANLLVISKNGAS--GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFI---NLINSTNAAQSKFNSITTTIPE 479 (667)
Q Consensus 405 ~~~~~iiaHRG~~--~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~---~L~r~t~v~~~~~~~~~~~~~~ 479 (667)
..+|+||||||++ +.+||||++||++|++.|||+||+|||+||||++||+||. +|+|+||
T Consensus 4 ~~~~~iiaHRG~~~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~l~Rtt~--------------- 68 (258)
T 2o55_A 4 VIIPKIVGHRGVGKEGLAPENTLRSFVLCMERNIPYIETDLRVCKTGEIVLFHGTPEGTIPFYKD--------------- 68 (258)
T ss_dssp CCCCEEEEETTTTTSTTSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECCCSTTSBCTTSTT---------------
T ss_pred ccCceEEECCCCCCCCCCCccHHHHHHHHHHcCcCEEEEEEEEecCCeEEEEeCCCCccceeeCC---------------
Confidence 4568999999999 9999999999999999999999999999999999999999 9999999
Q ss_pred cccCCCcccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcc
Q 005970 480 IMAGSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGM 559 (667)
Q Consensus 480 ~~~~~g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~ 559 (667)
++|. |.++||+||++|+++. +++||||+|+|+.+++.+..+.++||||.+.... ...
T Consensus 69 ---~~g~-v~~~t~~eL~~l~~~~-----------------~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~--~~~ 125 (258)
T 2o55_A 69 ---GTSR-IGDLSLEELKRLDVGG-----------------GHTIPSLEELFVAIEEQKFNLKLNLELKGEEWKR--KES 125 (258)
T ss_dssp ---TTCB-GGGSCHHHHTTCBSSS-----------------SCBCCBHHHHHHHHHHSCSCCEEEEEECCSSSSS--TTS
T ss_pred ---CCee-hhhCcHHHHhhcCCCC-----------------CCccCCHHHHHHHhhhhcCceEEEEEEccCCccc--cch
Confidence 7775 9999999999999862 3799999999999987421258999999754210 113
Q ss_pred cHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEe-ccchhhhhHHHHHHHHHhhhhcCCCeeEEe
Q 005970 560 SVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKV-KENIRDALNQTIEDIKKFADSVVLTMSLYL 637 (667)
Q Consensus 560 ~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~-~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~ 637 (667)
.+++.++++|+++++. ++++|+||+++.|..++++ |++++++++ .....+.. ..+. .+..+++. .+.+
T Consensus 126 ~~~~~v~~~l~~~~~~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~-~~~~----~~~~~~~~-~v~~ 195 (258)
T 2o55_A 126 GDHQRLLLLVEKYHMQ----ERVDYCSFHHEALAHLKALCPDVKITYLFNYMGQPTPL-DFVE----QACYGDAN-GVSM 195 (258)
T ss_dssp SHHHHHHHHHHTTTCG----GGEEEEESSHHHHHHHHHHCTTCEEEEECCTTSCCCCT-THHH----HHHHTTCS-EEEE
T ss_pred HHHHHHHHHHHHcCCC----CCEEEEeCCHHHHHHHHHHCCCCcEEEEEeCCCCCCHH-HHHH----HHHhcCCe-EEec
Confidence 6889999999999987 7999999999999999999 999999998 43211100 1111 12233443 2222
Q ss_pred CCCCCccHHHHHHHHHcCCcEEEEec----cC
Q 005970 638 KRGTSSQTQLWRSTHITRELVLMELL----QN 665 (667)
Q Consensus 638 ~~~~~~~~~~v~~ah~~Gl~V~vWTV----n~ 665 (667)
... ..++++|+.+|++|++|++||| |+
T Consensus 196 ~~~-~~~~~~v~~~~~~G~~v~~wTv~~~~n~ 226 (258)
T 2o55_A 196 LFH-YLTKEQVCTAHEKGLSVTVWMPWIFDDS 226 (258)
T ss_dssp EGG-GCCHHHHHHHHHTTCEEEEECCTTCCCC
T ss_pred Chh-hcCHHHHHHHHHCCCEEEEeeCCCCCCC
Confidence 111 2357999999999999999999 86
No 24
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=100.00 E-value=2.2e-41 Score=346.25 Aligned_cols=202 Identities=14% Similarity=0.066 Sum_probs=167.4
Q ss_pred eeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCCCcc
Q 005970 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGSGIF 487 (667)
Q Consensus 408 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~g~~ 487 (667)
|.||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|| ++|.
T Consensus 2 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~Rtt~------------------~~g~- 62 (248)
T 1zcc_A 2 TKIVSHRGANRFAPENTFAAADLALQQGADYIELDVRESADGVLYVIHDETLDRTTN------------------GTGP- 62 (248)
T ss_dssp CEEEETTTTTTTSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBTTTTSS------------------CCSB-
T ss_pred CeEEECCCCCCCCCchHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCCccccccC------------------CCcc-
Confidence 579999999999999999999999999999999999999999999999999999999 7776
Q ss_pred cccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHHHHH
Q 005970 488 SFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNSVME 567 (667)
Q Consensus 488 i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~v~~ 567 (667)
|.++||+||++|+++. .++||||+|+|+.+++.. +.++||||.+... ...+++.+++
T Consensus 63 v~~~t~~eL~~l~~g~-----------------~~~iptL~evl~~~~~~~--~~l~iEiK~~~~~----~~~~~~~v~~ 119 (248)
T 1zcc_A 63 VGHMLSSEIDTLDAGG-----------------WFDDRFKGAIVPRLDAYL--EHLRGRAGVYIEL----KYCDPAKVAA 119 (248)
T ss_dssp STTSCHHHHTTSCSST-----------------TTCGGGTTCCCCBHHHHH--HHHTTTCEEEEEE----EESCHHHHHH
T ss_pred hhhCCHHHHHhCCCCC-----------------CCCCCCHHHHHHHHHhcC--cEEEEEeCCCCCc----ccHHHHHHHH
Confidence 9999999999999874 258999999999998731 4789999976431 0126789999
Q ss_pred HHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCCc-cH
Q 005970 568 ALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTSS-QT 645 (667)
Q Consensus 568 ~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~~-~~ 645 (667)
+|+++++. ++++|+|||++.|.+++++ |++++++++..... ...++...++. .+.+... .. ++
T Consensus 120 ~l~~~~~~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~---------~~~~~~~~~~~-~i~~~~~-~~~~~ 184 (248)
T 1zcc_A 120 LVRHLGMV----RDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAKS---------PSLVGAVHHAS-IIEITPA-QMRRP 184 (248)
T ss_dssp HHHHHTCS----TTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHSS---------THHHHHTTCCS-EEEECHH-HHHSH
T ss_pred HHHHhCCC----CCEEEEECCHHHHHHHHHHCCCCcEEEEecCCcc---------HHHHHHHcCCC-EEEecHH-HhCCH
Confidence 99999987 7999999999999999999 99999999764210 11233334543 2222111 23 56
Q ss_pred HHHHHHHHcCCcEEEEeccCC
Q 005970 646 QLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 646 ~~v~~ah~~Gl~V~vWTVn~e 666 (667)
++|+.+|++|++|++||||++
T Consensus 185 ~~v~~~~~~G~~v~~wTvn~~ 205 (248)
T 1zcc_A 185 GIIEASRKAGLEIMVYYGGDD 205 (248)
T ss_dssp HHHHHHHHHTCEEEEECCCCC
T ss_pred HHHHHHHHCCCEEEEECCCCH
Confidence 899999999999999999985
No 25
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=100.00 E-value=9.9e-40 Score=331.79 Aligned_cols=201 Identities=12% Similarity=0.090 Sum_probs=163.5
Q ss_pred CceeEEEecCC--CCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccC
Q 005970 406 ANLLVISKNGA--SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG 483 (667)
Q Consensus 406 ~~~~iiaHRG~--~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~ 483 (667)
.+|.||||||+ ++.+||||++||++|++.|||+||+|||+||||++||+||.+++| +
T Consensus 3 ~~~~iiaHRG~~~~~~~pENTl~Af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~~--~------------------- 61 (238)
T 3no3_A 3 DNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQG--K------------------- 61 (238)
T ss_dssp CCCEEEETTSSCSSTTCCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEETT--E-------------------
T ss_pred CCCeEEeCCCCCCCCCCCccHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCCCC--C-------------------
Confidence 46899999999 689999999999999999999999999999999999999999997 3
Q ss_pred CCcccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHH
Q 005970 484 SGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTN 563 (667)
Q Consensus 484 ~g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~ 563 (667)
.|.++||+||++|+++. +++||||+|+|+.+++.+. +.++||||.+.... ....+++
T Consensus 62 ---~v~~~t~~el~~l~~~~-----------------~~~iptL~evl~~~~~~~~-~~l~iEiK~~~~~~--~~~~~~~ 118 (238)
T 3no3_A 62 ---HIQSCTYDELKDLQLSN-----------------GEKLPTLEQYLKRAKKLKN-IRLIFELKSHDTPE--RNRDAAR 118 (238)
T ss_dssp ---EGGGSCHHHHTTCBCTT-----------------SCBCCBHHHHHHHHHHCTT-CEEEEEECCCSSHH--HHHHHHH
T ss_pred ---ChHhCCHHHHhhCCCCC-----------------CCcCCcHHHHHHHHhhcCC-ceEEEEeCCCCCcc--hhHHHHH
Confidence 39999999999999862 3789999999999987532 48999999765321 1236889
Q ss_pred HHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCC-C
Q 005970 564 SVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRG-T 641 (667)
Q Consensus 564 ~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~-~ 641 (667)
.++++|+++++. ++++++||+++.|.+++++ |++++++++... .+ ..+ ...++. .+.+... +
T Consensus 119 ~v~~~l~~~~~~----~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~----~~---~~~----~~~~~~-~~~~~~~~~ 182 (238)
T 3no3_A 119 LSVQMVKRMKLA----KRTDYISFNMDACKEFIRLCPKSEVSYLNGEL----SP---MEL----KELGFT-GLDYHYKVL 182 (238)
T ss_dssp HHHHHHHHTTCG----GGEEEEESCHHHHHHHHHHCTTSCEEECSSCS----CH---HHH----HHTTCC-EEEEEHHHH
T ss_pred HHHHHHHHcCCc----CCEEEEECCHHHHHHHHHHCCCCeEEEEeCCC----CH---HHH----HHCCCc-eEeccHHhh
Confidence 999999999987 7999999999999999999 999999997642 11 111 222332 1111111 1
Q ss_pred CccHHHHHHHHHcCCcEEEEeccCC
Q 005970 642 SSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 642 ~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
..++++|+.+|++|++|++||||++
T Consensus 183 ~~~~~~v~~~~~~G~~v~~WTVn~~ 207 (238)
T 3no3_A 183 QSHPDWVKDCKVLGMTSNVWTVDDP 207 (238)
T ss_dssp HHSTTHHHHHHHTTCEEEEECCCSH
T ss_pred hCCHHHHHHHHHCCCEEEEECCCCH
Confidence 2245899999999999999999984
No 26
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=100.00 E-value=4.3e-39 Score=336.01 Aligned_cols=206 Identities=15% Similarity=0.201 Sum_probs=167.7
Q ss_pred ccCCceeEEEecCCCC-CCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccc
Q 005970 403 SKSANLLVISKNGASG-DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIM 481 (667)
Q Consensus 403 ~~~~~~~iiaHRG~~~-~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~ 481 (667)
....+|+||||||+++ .+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|+
T Consensus 27 ~~~~~~~iiaHRG~~~~~~pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~Vv~HD~~l~rtt~----------------- 89 (292)
T 3mz2_A 27 ADDRIPLISGHRGGRGKGYPENSMETFENTLSYTPATFEIDPRLTKDSVIVLFHDDTLERTSN----------------- 89 (292)
T ss_dssp CTTCCCEEEEGGGCCBTTBCTTCHHHHHHHHHHCCCEEEECEEECTTCCEEECCSSSSTTTBS-----------------
T ss_pred CCCCCCEEEECCCCCCCCCCccHHHHHHHHHHcCCCEEEEEEeECCCCcEEEECCchhcccCC-----------------
Confidence 3456799999999985 7999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccH
Q 005970 482 AGSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSV 561 (667)
Q Consensus 482 ~~~g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~ 561 (667)
++|. |.++||+||++|+++.+. ..|. .++||||+|+|+.++.. +.++||+|...
T Consensus 90 -~~g~-v~~~t~~el~~l~~~~~~----------~~~~-~~~iptL~evl~~~~~~---~~l~iE~K~~~---------- 143 (292)
T 3mz2_A 90 -GTGK-VSDYTWEELQNFRLKDPE----------GNIT-NYRIPTLEEAIRWARGK---TILILDKKDVP---------- 143 (292)
T ss_dssp -CCSC-GGGSCHHHHTTSCBBCTT----------CCBC-SCCCCBHHHHHHHHTTT---CCEEECCSSSC----------
T ss_pred -CCCc-hhhCcHHHHhcCCCCCCC----------CccC-CcCCCCHHHHHHHhCCC---cEEEEEECCCc----------
Confidence 6775 999999999999987532 2244 37999999999999865 47999998642
Q ss_pred HHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCC----eeEE
Q 005970 562 TNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLT----MSLY 636 (667)
Q Consensus 562 ~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~----~~i~ 636 (667)
.+.++++|+++++. ++++++||+++.|++++++ |++++++++.. ...+..+.. .++. ....
T Consensus 144 ~~~v~~~l~~~~~~----~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~------~~~l~~~~~----~g~~~~~~~~~~ 209 (292)
T 3mz2_A 144 MERTAQLITDMQAE----PYVMITVHDGASARFFYEKNPNFMFEAFVKT------KEAVQDYED----NGIPWSHIMAYV 209 (292)
T ss_dssp HHHHHHHHHHTTCT----TTEEEEESSHHHHHHHHHHCTTCCEEEECCS------HHHHHHHHH----TTCCGGGEEEEE
T ss_pred HHHHHHHHHHcCCC----CCEEEEECCHHHHHHHHHHCCCCeEEEEeCC------HHHHHHHHH----hCCChhheeeee
Confidence 26889999999987 7999999999999999999 99999999753 122222221 1221 1111
Q ss_pred eCCCCCccHHHHHHHHHcCCcEEEEeccC
Q 005970 637 LKRGTSSQTQLWRSTHITRELVLMELLQN 665 (667)
Q Consensus 637 ~~~~~~~~~~~v~~ah~~Gl~V~vWTVn~ 665 (667)
.......++++|+.+|++|++|++||||+
T Consensus 210 ~~~~~~~~~~~V~~ah~~G~~V~vWTv~t 238 (292)
T 3mz2_A 210 GPKITPEVREVIDMLHERGVMCMISTAPS 238 (292)
T ss_dssp ESSCCHHHHHHHHHHHHTTBCEEEECTTT
T ss_pred cccccccCHHHHHHHHHCCCEEEEEeCCC
Confidence 22222346799999999999999999986
No 27
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=100.00 E-value=1.3e-39 Score=330.14 Aligned_cols=195 Identities=21% Similarity=0.216 Sum_probs=156.0
Q ss_pred CCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccCC
Q 005970 405 SANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGS 484 (667)
Q Consensus 405 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~~ 484 (667)
....+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|| ++
T Consensus 10 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~------------------~~ 71 (234)
T 1o1z_A 10 HHHVIVLGHRGYSAKYLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDEDLKRLFG------------------LD 71 (234)
T ss_dssp CCCCEEEEETTTTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEEHHHHC------------------EE
T ss_pred cceEEEEEcCCCCCCCCCchHHHHHHHHHcCCCEEEEEeeEecCCCEEEEcCCcHHhcCC------------------cC
Confidence 346899999999999999999999999999999999999999999999999999999999 67
Q ss_pred CcccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHHHH
Q 005970 485 GIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVTNS 564 (667)
Q Consensus 485 g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~ 564 (667)
|. |.++||+||++|+ + ++||||+|+|+.+++. +.++||||.+. .+++
T Consensus 72 g~-v~d~T~~eL~~l~-~-------------------~~iptL~evL~~~~~~---~~l~iEiK~~~---------~~~~ 118 (234)
T 1o1z_A 72 VK-IRDATVSELKELT-D-------------------GKITTLKEVFENVSDD---KIINIEIKERE---------AADA 118 (234)
T ss_dssp EE-GGGSCHHHHHHHT-T-------------------TCCCBHHHHHHHSCTT---SEEEEEECCGG---------GHHH
T ss_pred cC-cccCcHHHHhcCC-C-------------------CCCCCHHHHHHhcccC---CeEEEEeCCcc---------HHHH
Confidence 75 9999999999987 2 6899999999999875 58999999643 4678
Q ss_pred HHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchh-hhhHHHHHHHHHhhhhcCCCeeEEeCCC-C
Q 005970 565 VMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIR-DALNQTIEDIKKFADSVVLTMSLYLKRG-T 641 (667)
Q Consensus 565 v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~-~~~~~~l~~~~~~a~~i~~~~~i~~~~~-~ 641 (667)
+++++++ . ++++++||+ |.+++++ |++++++++..... +. ......+. + -++. .+.+... +
T Consensus 119 v~~~l~~---~----~~vii~Sf~---l~~~~~~~p~~~~~~l~~~~~~~~~-~~~~~~~~--~--~~~~-~i~~~~~~~ 182 (234)
T 1o1z_A 119 VLEISKK---R----KNLIFSSFD---LDLLDEKFKGTKYGYLIDEENYGSI-ENFVERVE--K--ERPY-SLHVPYQAF 182 (234)
T ss_dssp HHHHHTT---C----CSEEEEESC---HHHHHHHCTTSCEEEECCTTTTCSH-HHHHHHHH--H--HCCS-EEEEEGGGG
T ss_pred HHHHHhc---c----CCEEEEchh---HHHHHhhCCCCcEEEEeccccccCH-HHHHHHcC--C--CCCC-EEEeCHHHh
Confidence 8888887 3 699999999 9999999 99999999875211 11 01111111 1 0112 2222111 2
Q ss_pred Ccc--HHHHHHHHHcCCcEEEEeccCC
Q 005970 642 SSQ--TQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 642 ~~~--~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
..+ +++|+.+|++|++|++||||++
T Consensus 183 g~~~~~~~v~~~~~~G~~v~~wTvn~~ 209 (234)
T 1o1z_A 183 ELEYAVEVLRSFRKKGIVIFVWTLNDP 209 (234)
T ss_dssp GSHHHHHHHHHHHHTTCEEEEESCCCH
T ss_pred cCCccHHHHHHHHHcCCEEEEeCCCCH
Confidence 013 7899999999999999999984
No 28
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=3.4e-38 Score=326.17 Aligned_cols=251 Identities=16% Similarity=0.154 Sum_probs=180.8
Q ss_pred CCCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCCcccccccccccccccccccCCC
Q 005970 88 TGDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGV 167 (667)
Q Consensus 88 ~~~~~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l~rtt~~~~~~~~~~~~~~~~g~ 167 (667)
.+++|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|++.
T Consensus 14 ~~~~~~iiaHRG~~~~~pENTl~af~~A~~~g~d--~iE~Dv~~TkDg~~vv~HD~~l~r~t~~~--------------- 76 (278)
T 3i10_A 14 KSNKVLVVAHRGNWRSAPENSTAAIDSAIAMKVD--IVEIDIQKTKDGQLILMHDNTLDRTTTGK--------------- 76 (278)
T ss_dssp TCCSCEEEEETSCTTTSCTTSHHHHHHHHHTTCS--EEEEEEEECTTSCEEECSSSBSTTTBSCC---------------
T ss_pred CCCCCEEEECCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEEECCCCeEEEecCcchhhcCCCC---------------
Confidence 4567999999999999999999999999999999 99999999999999999999999999943
Q ss_pred CCCccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCCCceEEeccCchhhhhcCCcHHHHHHHHHhh
Q 005970 168 PTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQHNLSMRSFVLSVSRS 247 (667)
Q Consensus 168 ~~~g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~~~~~ieiK~~~~~~~~~~~~~~~l~~~l~~ 247 (667)
+.|.++||+||++|+++.++. .+. +++||||+|+|+++++ ++.++|+.. ..+++.+++++++
T Consensus 77 ----g~v~~~t~~el~~l~~~~~~~----~~~--~~~iptL~evl~~~~~-~~~~nie~~-------~~~~~~v~~~l~~ 138 (278)
T 3i10_A 77 ----GEIKNWTLADIKKLKLKDKDG----KVT--NYVVPTLEEALLTAKG-KIMVNLDKA-------YDIFDDVYAILEK 138 (278)
T ss_dssp ----SBGGGSCHHHHTTSCBBCTTS----CBC--SCCCCBHHHHHHHHTT-TSEEEEESC-------GGGHHHHHHHHHH
T ss_pred ----ceeecCcHHHHhcCCCCCCCc----ccC--CCCCCCHHHHHHHhcC-CeEEEEecC-------chHHHHHHHHHHH
Confidence 379999999999999987642 233 3699999999999975 344444421 2367889999999
Q ss_pred cCCc---eEecCCHHHHHHHHhhhCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHhhcceecCCC-ccccccCCC
Q 005970 248 VVVN---YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPK-DYIWPVDES 323 (667)
Q Consensus 248 ~~~~---~i~SFd~~~L~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~~a~~i~~~~-~~~~~~~~~ 323 (667)
+++. +++|+ ..++++++..+ +.+..+.++.. +....+. ..+.+..|+..+.|.. ...++. .
T Consensus 139 ~~~~~~v~i~s~--~~l~~~~~~~p--~~~~~~l~~p~--i~~~~~~-------~~~~i~~~~~~~~p~~~~~~~~~-~- 203 (278)
T 3i10_A 139 TETQNQVIMKGG--QPIETVKREFG--SYLDKVLYMPV--IDLGNKE-------AEKIITDYLKELRPAAFEIIYSD-P- 203 (278)
T ss_dssp HTCGGGEEEEES--SCHHHHHHHHG--GGTTTSEEEEE--EETTSTT-------HHHHHHHHHHHTCCSEEEEEBCC-T-
T ss_pred cCCCCeEEEEEh--HHHHHHHHHCc--CCccceEEEee--ecccccc-------hHHHHHHHHHhcCceEEEEeecC-C-
Confidence 9874 78884 34777777642 23222211100 0000000 1344555554444432 222221 1
Q ss_pred CCCCCChHHHHHHHHcCCeEEEEeccCCCCcccCCC-----CChHHHHHHHHhC-CCcccceEecCCCCCchhhhhhh
Q 005970 324 LYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYS-----YDPLTEYLSFIDN-GDFSVDGVLSDFPLTPSAAVDCF 395 (667)
Q Consensus 324 ~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~-----~d~~~e~~~li~~-G~~gVDGIiTD~P~~~~~~l~~~ 395 (667)
....+.+++.+|++|++|++||+.++.. ..+. .|+...|..++++ | ||||+||+|+.+.++++..
T Consensus 204 --~~~~~~~v~~~~~~g~~v~~nTlw~~~~--~g~~d~~a~~d~~~~~~~l~~~~G---vd~I~TD~P~~l~~yL~~~ 274 (278)
T 3i10_A 204 --KNPLPPKIKQLLFKKSLIWYNTLWGSLA--GNHDDNLALTDPEKSYGYLIEQLG---ARILQTDQPAYLLDYLRKK 274 (278)
T ss_dssp --TCSSHHHHHHHHTTTSEEEEECSSGGGB--TTCCHHHHHHCHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHH
T ss_pred --ccchHHHHHHHHHCCCEEEEEecccccc--cCccchhhccChHHHHHHHHhcCC---CCEEEeCCHHHHHHHHhhc
Confidence 1223679999999999999999865421 1111 1566789999998 8 9999999999999999765
No 29
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=100.00 E-value=5.6e-38 Score=316.13 Aligned_cols=192 Identities=13% Similarity=0.106 Sum_probs=156.0
Q ss_pred cCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCccccccccccC
Q 005970 404 KSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG 483 (667)
Q Consensus 404 ~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~~ 483 (667)
...++.||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+ ++
T Consensus 4 ~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d~iE~DV~lT~Dg~lVv~HD~~l~--~g------------------- 62 (224)
T 1vd6_A 4 FRQRPLRLGHRGAPLKAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTP--LG------------------- 62 (224)
T ss_dssp ---CCEEEEETSCTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCSEET--TE-------------------
T ss_pred CCCCceEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEEeeEecCCcEEEECCCccC--CC-------------------
Confidence 345689999999999999999999999999999999999999999999999999998 33
Q ss_pred CCcccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHH-hcCCcceEEEEeecchhhhhhhcccHH
Q 005970 484 SGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAK-NANSLSGVLISIENAVYLAEKQGMSVT 562 (667)
Q Consensus 484 ~g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~-~~~~~~~l~iEiK~~~~~~~~~~~~~~ 562 (667)
.|.++||+||++|+ ++||||+|+|+.++ .. .+.++||||...... ..++
T Consensus 63 ---~v~~~t~~eL~~l~---------------------~~iptL~evl~~~~~~~--~~~l~iEiK~~~~~~----~~~~ 112 (224)
T 1vd6_A 63 ---PVFQVDYADLKAQE---------------------PDLPRLEEVLALKEAFP--QAVFNVELKSFPGLG----EEAA 112 (224)
T ss_dssp ---EGGGSCHHHHHHHS---------------------TTCCBHHHHHGGGGTCT--TCEEEEEECCCTTSH----HHHH
T ss_pred ---ChhhCCHHHHHhcC---------------------CCCCCHHHHHHhhhccC--CceEEEEECCCCCcc----HHHH
Confidence 39999999999986 36999999999998 32 258999999765421 2467
Q ss_pred HHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCC
Q 005970 563 NSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGT 641 (667)
Q Consensus 563 ~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~ 641 (667)
++++++|++ . ++++|+|||++.|..++++ |++++++++.... ..++..+++. .+.+...
T Consensus 113 ~~v~~~l~~---~----~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~-----------~~~~~~~~~~-~i~~~~~- 172 (224)
T 1vd6_A 113 RRLAALLRG---R----EGVWVSSFDPLALLALRKAAPGLPLGFLMAEDH-----------SALLPCLGVE-AVHPHHA- 172 (224)
T ss_dssp HHHHHHTTT---C----SSEEEEESCHHHHHHHHHHCTTSCEEEEESSCC-----------GGGGGGSCCS-EEEEBGG-
T ss_pred HHHHHHHhc---C----CcEEEEeCCHHHHHHHHHHCCCCCEEEEecccc-----------HHHHHHcCCc-EEecCcc-
Confidence 888888876 3 6899999999999999999 9999999987421 1233344543 2333222
Q ss_pred CccHHHHHHHHHcCCcEEEEeccCC
Q 005970 642 SSQTQLWRSTHITRELVLMELLQNS 666 (667)
Q Consensus 642 ~~~~~~v~~ah~~Gl~V~vWTVn~e 666 (667)
..++++|+.+|++|++|++||||++
T Consensus 173 ~~~~~~v~~~~~~G~~v~~wtvn~~ 197 (224)
T 1vd6_A 173 LVTEEAVAGWRKRGLFVVAWTVNEE 197 (224)
T ss_dssp GCCHHHHHHHHHTTCEEEEECCCCH
T ss_pred cCCHHHHHHHHHCCCEEEEEeCCCH
Confidence 2357999999999999999999974
No 30
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=1.8e-37 Score=320.82 Aligned_cols=212 Identities=18% Similarity=0.178 Sum_probs=169.5
Q ss_pred ccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccccccCCCCccCCcccccccccc
Q 005970 403 SKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMA 482 (667)
Q Consensus 403 ~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r~t~v~~~~~~~~~~~~~~~~~ 482 (667)
....+++||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|+
T Consensus 13 ~~~~~~~iiaHRG~~~~~pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~vv~HD~~l~r~t~------------------ 74 (278)
T 3i10_A 13 PKSNKVLVVAHRGNWRSAPENSTAAIDSAIAMKVDIVEIDIQKTKDGQLILMHDNTLDRTTT------------------ 74 (278)
T ss_dssp TTCCSCEEEEETSCTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBSTTTBS------------------
T ss_pred CCCCCCEEEECCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCeEEEecCcchhhcCC------------------
Confidence 45567999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhhhcccHH
Q 005970 483 GSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEKQGMSVT 562 (667)
Q Consensus 483 ~~g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~ 562 (667)
+.|. |.++||+||++|+++.++ ..+. .++||||+|+|+.+++. +.++||. . . .++
T Consensus 75 ~~g~-v~~~t~~el~~l~~~~~~----------~~~~-~~~iptL~evl~~~~~~---~~~nie~--~-~-------~~~ 129 (278)
T 3i10_A 75 GKGE-IKNWTLADIKKLKLKDKD----------GKVT-NYVVPTLEEALLTAKGK---IMVNLDK--A-Y-------DIF 129 (278)
T ss_dssp CCSB-GGGSCHHHHTTSCBBCTT----------SCBC-SCCCCBHHHHHHHHTTT---SEEEEES--C-G-------GGH
T ss_pred CCce-eecCcHHHHhcCCCCCCC----------cccC-CCCCCCHHHHHHHhcCC---eEEEEec--C-c-------hHH
Confidence 7775 999999999999998643 1233 48999999999999864 3555553 1 1 467
Q ss_pred HHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCCcEEEEeccchhhhhHHHHHHHHHhhhhcCCC-eeEEeCCC
Q 005970 563 NSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSYELVYKVKENIRDALNQTIEDIKKFADSVVLT-MSLYLKRG 640 (667)
Q Consensus 563 ~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~-~~i~~~~~ 640 (667)
++|+++|+++++. ++++++|+ ..+..++++ |++++++++...+....+...+.+.+|+..+++. ..+.....
T Consensus 130 ~~v~~~l~~~~~~----~~v~i~s~--~~l~~~~~~~p~~~~~~l~~p~i~~~~~~~~~~i~~~~~~~~p~~~~~~~~~~ 203 (278)
T 3i10_A 130 DDVYAILEKTETQ----NQVIMKGG--QPIETVKREFGSYLDKVLYMPVIDLGNKEAEKIITDYLKELRPAAFEIIYSDP 203 (278)
T ss_dssp HHHHHHHHHHTCG----GGEEEEES--SCHHHHHHHHGGGTTTSEEEEEEETTSTTHHHHHHHHHHHTCCSEEEEEBCCT
T ss_pred HHHHHHHHHcCCC----CeEEEEEh--HHHHHHHHHCcCCccceEEEeeecccccchHHHHHHHHHhcCceEEEEeecCC
Confidence 8999999999998 79999994 469999999 9998877765422222223345567777777776 33332222
Q ss_pred CCccHHHHHHHHHcCCcEEEEec
Q 005970 641 TSSQTQLWRSTHITRELVLMELL 663 (667)
Q Consensus 641 ~~~~~~~v~~ah~~Gl~V~vWTV 663 (667)
....+++|+.+|++|++|++||+
T Consensus 204 ~~~~~~~v~~~~~~g~~v~~nTl 226 (278)
T 3i10_A 204 KNPLPPKIKQLLFKKSLIWYNTL 226 (278)
T ss_dssp TCSSHHHHHHHHTTTSEEEEECS
T ss_pred ccchHHHHHHHHHCCCEEEEEec
Confidence 23447899999999999999995
No 31
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=99.97 E-value=1.4e-32 Score=286.72 Aligned_cols=228 Identities=12% Similarity=0.035 Sum_probs=153.4
Q ss_pred CCC-EEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCC---CcccccccccccccccccccC
Q 005970 90 DPP-FVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLK---LDNASNIAQIFKTQQKNYLVN 165 (667)
Q Consensus 90 ~~~-~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~---l~rtt~~~~~~~~~~~~~~~~ 165 (667)
.+| +||||| |||++||+.|++.||| +||+|||+ |||++||+||.+ |+|||++.
T Consensus 4 ~~p~~iiaHr-------ENTl~Af~~A~~~Gad--~IE~DV~l-kDG~lVv~HD~~~~~l~Rtt~~~------------- 60 (285)
T 1xx1_A 4 RRPIWNLAHM-------VNAVAQIPDFLDLGAN--ALEADVTF-KGSVPTYTYHGTPCDFGRDCIRW------------- 60 (285)
T ss_dssp SEEEEEEESC-------CCSTTHHHHHHHHTCS--EEEEEEEE-ETTEEEEEECCSSCCTTSCSCCE-------------
T ss_pred CCCcEEEEeh-------hccHHHHHHHHHhCCC--EEEEEEEE-ECCEEEEEcCCcccccccccCCC-------------
Confidence 456 899999 9999999999999999 99999999 999999999999 99999943
Q ss_pred CCCCCccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCCCceEEeccCchhhhhc----CCcHHHHH
Q 005970 166 GVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQH----NLSMRSFV 241 (667)
Q Consensus 166 g~~~~g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~~~~~ieiK~~~~~~~~----~~~~~~~l 241 (667)
+.|.|+ |+||++|++ ++ .+.|.+ .|+ .++||||.+...... +..+++.+
T Consensus 61 ------g~v~d~-l~eL~~l~~--~~---~~~~~~----------~L~-----~l~iEiK~~~~~~~~~~~~~~~~~~~l 113 (285)
T 1xx1_A 61 ------EYFNVF-LKTLREYTT--PG---NAKYRD----------GFI-----LFVLDLKTGSLSNDQVRPAGENVAKEL 113 (285)
T ss_dssp ------EEHHHH-HHHHHHHTS--TT---CTTCCT----------TCC-----EEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred ------ccHHHH-HHHHHHccc--CC---CCcccc----------ccc-----EEEEecCCCcccccccchhhhhHHHHH
Confidence 379999 999999998 31 233333 222 799999976432110 11133333
Q ss_pred HHHHhhc----CC----ceEecCCHHHHHH-HHhh-------hCCCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHh
Q 005970 242 LSVSRSV----VV----NYISSPEVNFLRS-IAAR-------FRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT 305 (667)
Q Consensus 242 ~~~l~~~----~~----~~i~SFd~~~L~~-l~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~ 305 (667)
++.+... .. ++++||++..|.+ +++. . | ..++.+.+ ..... .+... +..+..
T Consensus 114 l~~~~~~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~~~~~~~~-p-~~~~~~l~-~~~~~--~~~~~-------~~~~~~ 181 (285)
T 1xx1_A 114 LQNYWNNGNNGGRAYVVLSLPDIGHYEFVRGFKEVLKKEGHED-L-LEKVGYDF-SGPYL--PSLPT-------LDATHE 181 (285)
T ss_dssp HHHTSGGGSSCCCCEEEEEESCGGGHHHHHHHHHHHHHTTCGG-G-GGGEEEEE-CCCCS--SSCCC-------HHHHHH
T ss_pred HHHHhhccccccccceeEEEEeCCHHHHHHHHHHHhhhccccC-c-ccceEEec-ccccc--cchhh-------HHHHHH
Confidence 3333332 23 5899999999999 9987 4 3 56777633 21100 00001 111222
Q ss_pred hcceecCCCcccc-ccCC------CCCCCCChHHHHHHHHcCC--eEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcc
Q 005970 306 FASGILVPKDYIW-PVDE------SLYLLPHTTIVLDAHKERL--EVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFS 376 (667)
Q Consensus 306 ~a~~i~~~~~~~~-~~~~------~~~l~~~~~~v~~ah~~Gl--~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~g 376 (667)
++..++... ..+ +... ..+...++.+++.+|++|+ +|++||||++ ++|++++++|
T Consensus 182 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Glg~~V~~WTvn~~------------~~~~~l~~~G--- 245 (285)
T 1xx1_A 182 AYKKAGVDG-HIWLSDGLTNFSPLGDMARLKEAIKSRDSANGFINKIYYWSVDKV------------STTKAALDVG--- 245 (285)
T ss_dssp HHHHHTCCS-CBEEEECSCCSSHHHHHHHHHHHHHHHTSTTCCCCEEEEECCCSH------------HHHHHHHHHT---
T ss_pred HHHHhCCCC-ccccccccccccccccHHHHhHHHHHHHHhcCCCCeEEEeeCCCH------------HHHHHHHhcC---
Confidence 222222111 000 0000 0000113668999999999 9999999754 7899999888
Q ss_pred cceEecCCCCCchhhhhhh
Q 005970 377 VDGVLSDFPLTPSAAVDCF 395 (667)
Q Consensus 377 VDGIiTD~P~~~~~~l~~~ 395 (667)
|||||||+|+.++++++..
T Consensus 246 VDgIiTD~P~~~~~~l~~~ 264 (285)
T 1xx1_A 246 VDGIMTNYPNVLIGVLKES 264 (285)
T ss_dssp CSEEEESCHHHHHHHHHST
T ss_pred CCEEEeCCHHHHHHHHhhh
Confidence 9999999999988888654
No 32
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=99.95 E-value=4.5e-29 Score=260.21 Aligned_cols=200 Identities=8% Similarity=0.027 Sum_probs=138.0
Q ss_pred Cce-eEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCc---ccccccCCCCccCCccccccccc
Q 005970 406 ANL-LVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFIN---LINSTNAAQSKFNSITTTIPEIM 481 (667)
Q Consensus 406 ~~~-~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~---L~r~t~v~~~~~~~~~~~~~~~~ 481 (667)
++| +||||| |||++||++|+++|||+||+|||+ |||++||+||.+ |+|+|+
T Consensus 4 ~~p~~iiaHr-------ENTl~Af~~A~~~Gad~IE~DV~l-kDG~lVv~HD~~~~~l~Rtt~----------------- 58 (285)
T 1xx1_A 4 RRPIWNLAHM-------VNAVAQIPDFLDLGANALEADVTF-KGSVPTYTYHGTPCDFGRDCI----------------- 58 (285)
T ss_dssp SEEEEEEESC-------CCSTTHHHHHHHHTCSEEEEEEEE-ETTEEEEEECCSSCCTTSCSC-----------------
T ss_pred CCCcEEEEeh-------hccHHHHHHHHHhCCCEEEEEEEE-ECCEEEEEcCCcccccccccC-----------------
Confidence 455 999999 999999999999999999999999 999999999999 999999
Q ss_pred cCCCcccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhhh---hc
Q 005970 482 AGSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAEK---QG 558 (667)
Q Consensus 482 ~~~g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~~---~~ 558 (667)
++|. |.++ ++||++|++. + ++.|.+ .|+ .++||||.+...... .+
T Consensus 59 -~~g~-v~d~-l~eL~~l~~~--~---------~~~~~~---------~L~---------~l~iEiK~~~~~~~~~~~~~ 106 (285)
T 1xx1_A 59 -RWEY-FNVF-LKTLREYTTP--G---------NAKYRD---------GFI---------LFVLDLKTGSLSNDQVRPAG 106 (285)
T ss_dssp -CEEE-HHHH-HHHHHHHTST--T---------CTTCCT---------TCC---------EEEEEECCTTCCHHHHHHHH
T ss_pred -CCcc-HHHH-HHHHHHcccC--C---------CCcccc---------ccc---------EEEEecCCCcccccccchhh
Confidence 7776 9999 9999999982 1 123332 221 599999986542100 00
Q ss_pred ccHHHHHHHHHHhcCCCCCCCce----EEEEeCCHHHHHH-HHhc--------cCCcEEEEeccchhhhhHHHHHHHHHh
Q 005970 559 MSVTNSVMEALGNAGYNKQTALK----VMIQSTDSSVLMK-LREK--------TSYELVYKVKENIRDALNQTIEDIKKF 625 (667)
Q Consensus 559 ~~~~~~v~~~l~~~~~~~~~~~~----v~i~SFd~~~L~~-~~~~--------p~~~~~~L~~~~~~~~~~~~l~~~~~~ 625 (667)
..+++. +++++++.....++ ++|+||++.+|.+ ++++ |.+++++++..... .+...+..+..+
T Consensus 107 ~~~~~~---ll~~~~~~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~~~~~~~~p~~~~~~l~~~~~~-~~~~~~~~~~~~ 182 (285)
T 1xx1_A 107 ENVAKE---LLQNYWNNGNNGGRAYVVLSLPDIGHYEFVRGFKEVLKKEGHEDLLEKVGYDFSGPYL-PSLPTLDATHEA 182 (285)
T ss_dssp HHHHHH---HHHHTSGGGSSCCCCEEEEEESCGGGHHHHHHHHHHHHHTTCGGGGGGEEEEECCCCS-SSCCCHHHHHHH
T ss_pred hhHHHH---HHHHHhhccccccccceeEEEEeCCHHHHHHHHHHHhhhccccCcccceEEecccccc-cchhhHHHHHHH
Confidence 113333 56666553111136 9999999999999 9986 88999999864310 000012223334
Q ss_pred hhhcCCCeeEE-eC--------C-CCCccHHHHHHHHHcCC--cEEEEeccCC
Q 005970 626 ADSVVLTMSLY-LK--------R-GTSSQTQLWRSTHITRE--LVLMELLQNS 666 (667)
Q Consensus 626 a~~i~~~~~i~-~~--------~-~~~~~~~~v~~ah~~Gl--~V~vWTVn~e 666 (667)
+..+++...++ +. . ....++.+|+++|++|+ +|++||||++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Glg~~V~~WTvn~~ 235 (285)
T 1xx1_A 183 YKKAGVDGHIWLSDGLTNFSPLGDMARLKEAIKSRDSANGFINKIYYWSVDKV 235 (285)
T ss_dssp HHHHTCCSCBEEEECSCCSSHHHHHHHHHHHHHHHTSTTCCCCEEEEECCCSH
T ss_pred HHHhCCCCccccccccccccccccHHHHhHHHHHHHHhcCCCCeEEEeeCCCH
Confidence 44444321110 00 0 01134678999999999 9999999984
No 33
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=99.84 E-value=1.1e-20 Score=192.33 Aligned_cols=226 Identities=14% Similarity=0.081 Sum_probs=141.1
Q ss_pred CCCC-EEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC---ccccccccccccccccccc
Q 005970 89 GDPP-FVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL---DNASNIAQIFKTQQKNYLV 164 (667)
Q Consensus 89 ~~~~-~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l---~rtt~~~~~~~~~~~~~~~ 164 (667)
..+| .+|||| |||++||+.|++.||+ +||+||++|+||++|++||... .|.+....
T Consensus 25 ~~rp~~~i~H~-------vNTl~~~~~a~~~GAn--~IE~DV~~~~dg~~v~~hhg~pcdc~r~C~~~~----------- 84 (302)
T 3rlg_A 25 NRRPIWIMGAM-------VNAIGQIDEFVNLGAN--SIETDVSFDDNANPEYTYHGIPCDCGRNCKKYE----------- 84 (302)
T ss_dssp CCEEEEEEESC-------CCSHHHHHHHHHTTCS--EEEEEECBCTTSCBCBCCCCSSCCTTCCSCCCC-----------
T ss_pred CCCceEEEeeh-------hhhHHHHHHHHHcCCC--EEEEEEEECCCCCEEEEECCCCcchhccCCCCc-----------
Confidence 3455 699997 9999999999999999 9999999999999999999844 45444211
Q ss_pred CCCCCCccccccCCHHhhccccccccccCCCCCCCCCCCccCCHHHHHHhhCCCceEEeccCchhhhh----cCCcHHHH
Q 005970 165 NGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQ----HNLSMRSF 240 (667)
Q Consensus 165 ~g~~~~g~~v~d~t~~el~~l~~~~~~~~~~~~~~~~~~~iptL~e~l~~~~~~~~~ieiK~~~~~~~----~~~~~~~~ 240 (667)
.+.+ .+++|+++..-. ++.|.. +=.-+++++|.+..... .+.++++.
T Consensus 85 --------~~~~-~l~~lr~~ttpg-----~~k~~~---------------~l~lv~~DlK~~~l~~~~~~~aG~~la~k 135 (302)
T 3rlg_A 85 --------NFND-FLKGLRSATTPG-----NSKYQE---------------KLVLVVFDLKTGSLYDNQANDAGKKLAKN 135 (302)
T ss_dssp --------BHHH-HHHHHHHHHSTT-----STTCCT---------------TCCEEEEEECGGGSCGGGHHHHHHHHHHH
T ss_pred --------cHHH-HHHHHHHhcCCC-----CCcccc---------------ceEEEEEEcCCCCCCHHHHHHhHHHHHHH
Confidence 3444 677776654311 122222 01347889996554332 35667777
Q ss_pred HHHHHhhcCC------ceEecCCHHHHHHHHhhh---CCCC-----CceEEEeccCCccCCCCCcchhHHhh--cHHHHH
Q 005970 241 VLSVSRSVVV------NYISSPEVNFLRSIAARF---RPSM-----TKLVFRFLGKSEIEPTTNQTYGSLLK--NLTFIK 304 (667)
Q Consensus 241 l~~~l~~~~~------~~i~SFd~~~L~~l~~~~---~~~~-----~~~~~~l~~~~~~~~~~~~~y~~~~~--~l~~i~ 304 (667)
+++.+-..|. +++|+|+...++.++... .... -+..|-+...++ ...+..+.+ ++....
T Consensus 136 Ll~~~w~~g~~~~ra~vilsi~~~~~~~~l~gf~~~l~~~g~~~LldkvG~Dfs~n~d-----l~~i~~~~~~~Gi~~h~ 210 (302)
T 3rlg_A 136 LLQHYWNNGNNGGRAYIVLSIPDLNHYPLIKGFKDQLTKDGHPELMDKVGHDFSGNDD-----IGDVGKAYKKAGITGHI 210 (302)
T ss_dssp HHHHTSGGGSSCCCCEEEEEESCGGGTHHHHHHHHHHHHTTCGGGGGGEEEEECSCCC-----HHHHHHHHHHTTCCSCB
T ss_pred HHHHHHhcCCCCceeEEEEecCcchHHHHHHHHHHHHhhcCHHHHhhhcCccccCCCC-----HHHHHHHHHhcCCcCcE
Confidence 7777765432 489999986555544331 0001 122332221111 112222221 222223
Q ss_pred hhcceecCCCccccccCCCCCCCCChHHHHHHHHc-----C--CeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCccc
Q 005970 305 TFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKE-----R--LEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSV 377 (667)
Q Consensus 305 ~~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~-----G--l~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gV 377 (667)
-+++|+.++. +. +...++.+.+. | ++|++||||++ ++|++++++| |
T Consensus 211 wqsDGItnC~--~r----------~~~rl~~ai~~RDs~~~~i~~V~vWTVNd~------------~~m~~l~~~G---V 263 (302)
T 3rlg_A 211 WQSDGITNCL--PR----------GLSRVNAAVANRDSANGFINKVYYWTVDKR------------STTRDALDAG---V 263 (302)
T ss_dssp EEEEECCTTS--CC----------CSHHHHHHHHHHTSTTCCCSEEEEECCCSH------------HHHHHHHHTT---C
T ss_pred EecCCcccce--ec----------cHHHHHHHHHhccCCCCceEEEEEEeCCCH------------HHHHHHHHcC---C
Confidence 3566777654 11 12233333333 3 79999999753 8899999988 9
Q ss_pred ceEecCCCCCchhhhhhh
Q 005970 378 DGVLSDFPLTPSAAVDCF 395 (667)
Q Consensus 378 DGIiTD~P~~~~~~l~~~ 395 (667)
||||||+|+.++++++..
T Consensus 264 DGIITD~Pd~l~~~l~~~ 281 (302)
T 3rlg_A 264 DGIMTNYPDVITDVLNEA 281 (302)
T ss_dssp SEEEESCHHHHHHHHTSH
T ss_pred CEEECCCHHHHHHHHHhc
Confidence 999999999999988654
No 34
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=99.62 E-value=1.7e-15 Score=154.27 Aligned_cols=137 Identities=9% Similarity=0.069 Sum_probs=96.0
Q ss_pred CCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcc---cccccCCCCccCCccccccccc
Q 005970 405 SANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINL---INSTNAAQSKFNSITTTIPEIM 481 (667)
Q Consensus 405 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L---~r~t~v~~~~~~~~~~~~~~~~ 481 (667)
.+++.+|||| |||++||+.|+++||++||+||++|+||+||++||... .|.++
T Consensus 26 ~rp~~~i~H~-------vNTl~~~~~a~~~GAn~IE~DV~~~~dg~~v~~hhg~pcdc~r~C~----------------- 81 (302)
T 3rlg_A 26 RRPIWIMGAM-------VNAIGQIDEFVNLGANSIETDVSFDDNANPEYTYHGIPCDCGRNCK----------------- 81 (302)
T ss_dssp CEEEEEEESC-------CCSHHHHHHHHHTTCSEEEEEECBCTTSCBCBCCCCSSCCTTCCSC-----------------
T ss_pred CCceEEEeeh-------hhhHHHHHHHHHcCCCEEEEEEEECCCCCEEEEECCCCcchhccCC-----------------
Confidence 3456899997 99999999999999999999999999999999999854 44443
Q ss_pred cCCCcccccCCHHHHcccCCCccCCcccccccCCCCCCCCccccCHHHHHHHHHhcCCcceEEEEeecchhhhh---hhc
Q 005970 482 AGSGIFSFSLIWDEIQTLIPQISNPYFKFKLFRNPKNKNAGKFMKLSDFLEMAKNANSLSGVLISIENAVYLAE---KQG 558 (667)
Q Consensus 482 ~~~g~~i~d~t~~EL~~L~~~~~~p~~~~~~~~~~~~~~~~~iPtL~EvL~~~~~~~~~~~l~iEiK~~~~~~~---~~~ 558 (667)
.+..+.+ .+++|+++... .+++|.. +.+-+.+++|......+ ..|
T Consensus 82 --~~~~~~~-~l~~lr~~ttp-----------g~~k~~~------------------~l~lv~~DlK~~~l~~~~~~~aG 129 (302)
T 3rlg_A 82 --KYENFND-FLKGLRSATTP-----------GNSKYQE------------------KLVLVVFDLKTGSLYDNQANDAG 129 (302)
T ss_dssp --CCCBHHH-HHHHHHHHHST-----------TSTTCCT------------------TCCEEEEEECGGGSCGGGHHHHH
T ss_pred --CCccHHH-HHHHHHHhcCC-----------CCCcccc------------------ceEEEEEEcCCCCCCHHHHHHhH
Confidence 1112555 67777765432 1233332 12458999997654332 245
Q ss_pred ccHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc
Q 005970 559 MSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK 598 (667)
Q Consensus 559 ~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~ 598 (667)
..+++++++.+-+.|..... -.|++|+|+.+-++.++..
T Consensus 130 ~~la~kLl~~~w~~g~~~~r-a~vilsi~~~~~~~~l~gf 168 (302)
T 3rlg_A 130 KKLAKNLLQHYWNNGNNGGR-AYIVLSIPDLNHYPLIKGF 168 (302)
T ss_dssp HHHHHHHHHHTSGGGSSCCC-CEEEEEESCGGGTHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCce-eEEEEecCcchHHHHHHHH
Confidence 66777777776665444322 4899999999766666543
No 35
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=92.37 E-value=0.073 Score=60.57 Aligned_cols=53 Identities=13% Similarity=0.110 Sum_probs=43.6
Q ss_pred eEEEecCC---CCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCcccc
Q 005970 409 LVISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN 461 (667)
Q Consensus 409 ~iiaHRG~---~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~r 461 (667)
+--+|--+ .-..-+-|..+|.+|+..||..||+|++=-.||.|||+|-.||..
T Consensus 175 i~SsHNTYL~G~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~tlts 230 (624)
T 1djx_A 175 VSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTFTS 230 (624)
T ss_dssp ECEESSTTBSSCSSSCCBCHHHHHHHHHTTCCEEEEEEECCGGGCCEECCTTSCCC
T ss_pred eecccchhhhcCcccCCcCHHHHHHHHHhCCcEEEEEeecCCCCCeEEecCCcccc
Confidence 33566542 334668899999999999999999999988899999999988743
No 36
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=91.08 E-value=0.14 Score=59.97 Aligned_cols=55 Identities=13% Similarity=0.108 Sum_probs=44.0
Q ss_pred ceeEEEecCC---CCCCCchhHHHHHHHHHCCCCeEEcceeeec--CCeEEEeccCcccc
Q 005970 407 NLLVISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMSK--DGVPFCLSFINLIN 461 (667)
Q Consensus 407 ~~~iiaHRG~---~~~~PENTl~Af~~A~~~Gad~iE~DV~lTk--Dg~~Vv~HD~~L~r 461 (667)
-.+--+|.-+ .-..-+-|..+|.+|+..||..||+|++=-. ||.|||+|-.||..
T Consensus 321 YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~ep~v~HG~Tlts 380 (799)
T 2zkm_X 321 YFINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTT 380 (799)
T ss_dssp EEECBBSSTTBSSCSSSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTTSSCC
T ss_pred heEeccccceeecCcccCcccHHHHHHHHHhCCCEEEEEeecCCCCCCCCEEEeCCcccc
Confidence 3444566542 2345688999999999999999999999776 89999999998743
No 37
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=90.45 E-value=0.16 Score=59.25 Aligned_cols=54 Identities=15% Similarity=0.123 Sum_probs=44.3
Q ss_pred ceeEEEecCC---CCCCCchhHHHHHHHHHCCCCeEEcceeeecCCeEEEeccCccc
Q 005970 407 NLLVISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (667)
Q Consensus 407 ~~~iiaHRG~---~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~L~ 460 (667)
-.+--+|.-+ .-..-+-|..+|.+|+..||..||+|++=-.||+|||+|-.||.
T Consensus 332 YfI~sshntyL~g~ql~g~ss~~~y~~aL~~gcRcvEld~wdg~~~ePvv~HG~Tlt 388 (816)
T 3qr0_A 332 YYINSSHNTYLTGHQLTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPIITHGFTMC 388 (816)
T ss_dssp EEECBBSSTTBSSCTTTSCBCSHHHHHHHHTTCCEEEEEEECCTTSSCEECCTTSSC
T ss_pred heecccccchhccccccCcccHHHHHHHHHhCCcEEEEEEecCCCCCceEccCCccc
Confidence 3444566542 23456888999999999999999999999999999999998875
No 38
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=88.58 E-value=0.3 Score=55.52 Aligned_cols=49 Identities=16% Similarity=0.082 Sum_probs=42.8
Q ss_pred EEeCC---CCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 95 VARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 95 iaHRG---~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
.+|-- |.-..-+-|.++|.+|+..|+. .||+|++=-.||.|||+|-.|+
T Consensus 177 SsHNTYL~G~Ql~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~ep~v~HG~tl 228 (624)
T 1djx_A 177 SSHNTYLLEDQLTGPSSTEAYIRALCKGCR--CLELDCWDGPNQEPIIYHGYTF 228 (624)
T ss_dssp EESSTTBSSCSSSCCBCHHHHHHHHHTTCC--EEEEEEECCGGGCCEECCTTSC
T ss_pred cccchhhhcCcccCCcCHHHHHHHHHhCCc--EEEEEeecCCCCCeEEecCCcc
Confidence 56754 3345678999999999999999 9999999999999999999987
No 39
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=87.99 E-value=0.22 Score=58.59 Aligned_cols=53 Identities=15% Similarity=0.131 Sum_probs=41.9
Q ss_pred eeEEEecCC---CCCCCchhHHHHHHHHHCCCCeEEcceeee--cCCeEEEeccCccc
Q 005970 408 LLVISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMS--KDGVPFCLSFINLI 460 (667)
Q Consensus 408 ~~iiaHRG~---~~~~PENTl~Af~~A~~~Gad~iE~DV~lT--kDg~~Vv~HD~~L~ 460 (667)
.+--+|.-+ .-..-+-|..+|.+|+..||..||+|++=- .||+|||+|..++.
T Consensus 326 fI~ssHNtYL~g~Ql~~~ss~~~y~~aL~~gcRcvEld~wdg~~~~~ep~v~hg~t~t 383 (885)
T 3ohm_B 326 FINSSHNTYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITHGFTMT 383 (885)
T ss_dssp EECCBSSTTBSSCSSEECBCSHHHHHHHHTTCCEEEEEEECCCSSSCCCEECSTTSEE
T ss_pred eeeccccceeccccccCcCcHHHHHHHHHhCCCEEEEEeeCCCCCCCCCEEeeCCccc
Confidence 344556542 223457789999999999999999999954 78999999999874
No 40
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A
Probab=87.12 E-value=1.3 Score=45.47 Aligned_cols=53 Identities=11% Similarity=-0.004 Sum_probs=39.2
Q ss_pred CCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcceeeec-CCeEEEeccCcccc
Q 005970 405 SANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSK-DGVPFCLSFINLIN 461 (667)
Q Consensus 405 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTk-Dg~~Vv~HD~~L~r 461 (667)
..-..+-+|--+-... ...+.+|++.|+.+||+||+-.. .|.+-|+|...|..
T Consensus 29 s~~T~~g~HNSY~~g~----~~~i~~qLd~GVR~LELDIw~n~~~g~~~V~Hg~~l~~ 82 (339)
T 3h4x_A 29 GTSTSVGVHNAYEKEK----YRYFADALDSGAALLELDLWSNALGRSWRVSHSNPLGN 82 (339)
T ss_dssp TSEEEEEETTTTCTTT----CSSHHHHHTTCCSEEEEEEESSSSSSSCEECSSSCSSC
T ss_pred ccceEeeccccccccC----cccHHHHHHhCCCEEEEEeecCCCCCCeEEeCCCcccc
Confidence 3345677776543221 46889999999999999999774 56799999877643
No 41
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=86.91 E-value=0.41 Score=55.98 Aligned_cols=50 Identities=18% Similarity=0.083 Sum_probs=43.1
Q ss_pred EEEeCC---CCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEec--CCeEEEccCCCC
Q 005970 94 VVARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTK--DEAGICFPDLKL 145 (667)
Q Consensus 94 iiaHRG---~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTk--Dg~~vv~HD~~l 145 (667)
-.+|-- |.-+.-+-|.++|.+|+..|+. .||+|++=-. ||.|||+|-.|+
T Consensus 324 ~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcR--cvElD~Wdg~~~~~ep~v~HG~Tl 378 (799)
T 2zkm_X 324 NSSHNTYLTAGQFSGLSSAEMYRQVLLSGCR--CVELDCWKGKPPDEEPIITHGFTM 378 (799)
T ss_dssp CBBSSTTBSSCSSSSCBCTHHHHHHHHTTCC--EEEEEEECCCTTCCSCEECCTTSS
T ss_pred eccccceeecCcccCcccHHHHHHHHHhCCC--EEEEEeecCCCCCCCCEEEeCCcc
Confidence 456664 3445678999999999999999 9999999887 999999999987
No 42
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=85.84 E-value=0.49 Score=55.23 Aligned_cols=50 Identities=20% Similarity=0.070 Sum_probs=43.3
Q ss_pred EEEeCC---CCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEccCCCC
Q 005970 94 VVARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKL 145 (667)
Q Consensus 94 iiaHRG---~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~HD~~l 145 (667)
-.+|.- |.-+.-+-|.++|..|+..|+. .||+|++=-.||.|||+|-.|+
T Consensus 335 ~sshntyL~g~ql~g~ss~~~y~~aL~~gcR--cvEld~wdg~~~ePvv~HG~Tl 387 (816)
T 3qr0_A 335 NSSHNTYLTGHQLTGKSSVEIYRQVLLTGCR--CLELDCWDGKDGEPIITHGFTM 387 (816)
T ss_dssp CBBSSTTBSSCTTTSCBCSHHHHHHHHTTCC--EEEEEEECCTTSSCEECCTTSS
T ss_pred cccccchhccccccCcccHHHHHHHHHhCCc--EEEEEEecCCCCCceEccCCcc
Confidence 456664 2345678999999999999999 9999999999999999999986
No 43
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=78.52 E-value=0.98 Score=53.13 Aligned_cols=50 Identities=14% Similarity=0.046 Sum_probs=41.6
Q ss_pred EEEeCC---CCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEe--cCCeEEEccCCCC
Q 005970 94 VVARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLT--KDEAGICFPDLKL 145 (667)
Q Consensus 94 iiaHRG---~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lT--kDg~~vv~HD~~l 145 (667)
-.+|.- |.-+.-+-|.++|..|+..|+. .||+|++=- +||.|||+|-.|+
T Consensus 328 ~ssHNtYL~g~Ql~~~ss~~~y~~aL~~gcR--cvEld~wdg~~~~~ep~v~hg~t~ 382 (885)
T 3ohm_B 328 NSSHNTYLTAGQLAGTSSVEMYRQALLWGCR--CVELDVWKGRPPEEEPFITHGFTM 382 (885)
T ss_dssp CCBSSTTBSSCSSEECBCSHHHHHHHHTTCC--EEEEEEECCCSSSCCCEECSTTSE
T ss_pred eccccceeccccccCcCcHHHHHHHHHhCCC--EEEEEeeCCCCCCCCCEEeeCCcc
Confidence 355664 2334568899999999999999 999999965 7899999999987
No 44
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=75.20 E-value=11 Score=38.40 Aligned_cols=89 Identities=11% Similarity=-0.043 Sum_probs=53.7
Q ss_pred HHHHHHHHcCCeEEEEeccCCCCcccCCCCChH--H-HHHHHHhCCCcccceEecCCCC-CchhhhhhhhhcCcCcccCC
Q 005970 331 TIVLDAHKERLEVFASNFANDIPISFNYSYDPL--T-EYLSFIDNGDFSVDGVLSDFPL-TPSAAVDCFAHLGKNASKSA 406 (667)
Q Consensus 331 ~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~--~-e~~~li~~G~~gVDGIiTD~P~-~~~~~l~~~~~~~~~~~~~~ 406 (667)
.+++.+|+.|+.|.+|+...... ..|+. . ..+...++| +|.|-|.+|. .+.++.+. . +
T Consensus 162 ~v~~~a~~~GlpvIie~~~G~~~-----~~d~e~i~~aariA~elG---AD~VKt~~t~e~~~~vv~~--------~--~ 223 (295)
T 3glc_A 162 QLVDAGMKVGMPTMAVTGVGKDM-----VRDQRYFSLATRIAAEMG---AQIIKTYYVEKGFERIVAG--------C--P 223 (295)
T ss_dssp HHHHHHHTTTCCEEEEECC---------CCSHHHHHHHHHHHHHTT---CSEEEEECCTTTHHHHHHT--------C--S
T ss_pred HHHHHHHHcCCEEEEECCCCCcc-----CCCHHHHHHHHHHHHHhC---CCEEEeCCCHHHHHHHHHh--------C--C
Confidence 57889999999999998542211 12332 1 334445555 9999999983 22222211 0 1
Q ss_pred ceeEEEecCCCCCCCchhHHHHHHHHHCCCCeE
Q 005970 407 NLLVISKNGASGDYPSCTNLAYQKAISDGVDFI 439 (667)
Q Consensus 407 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~i 439 (667)
-|. ++ -|+...-++-.+...+.|++.||+++
T Consensus 224 vPV-v~-~GG~~~~~~~~l~~v~~ai~aGA~Gv 254 (295)
T 3glc_A 224 VPI-VI-AGGKKLPEREALEMCWQAIDQGASGV 254 (295)
T ss_dssp SCE-EE-ECCSCCCHHHHHHHHHHHHHTTCSEE
T ss_pred CcE-EE-EECCCCCHHHHHHHHHHHHHhCCeEE
Confidence 233 44 34433345778888889999998765
No 45
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=73.75 E-value=11 Score=37.53 Aligned_cols=101 Identities=10% Similarity=-0.006 Sum_probs=59.7
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHH-HHHHhCCCcccceEecCCCCCchhhhhhhhhcCcCcccCCce
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEY-LSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSANL 408 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~-~~li~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~~~ 408 (667)
..+++.+|+.|+++.+++..+..-..-....+...+. +...+.| +|.|.+.+|.. ...++..... ...
T Consensus 135 ~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~G---ad~i~~~~~~~-~~~l~~i~~~-------~~i 203 (273)
T 2qjg_A 135 GMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELG---ADIVKTSYTGD-IDSFRDVVKG-------CPA 203 (273)
T ss_dssp HHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTT---CSEEEECCCSS-HHHHHHHHHH-------CSS
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcC---CCEEEECCCCC-HHHHHHHHHh-------CCC
Confidence 3478889999999999863211100000111122344 6667666 99999997633 2333333211 124
Q ss_pred eEEEecCCCCCCCchhHHHHHHHHHCCCCeEEc
Q 005970 409 LVISKNGASGDYPSCTNLAYQKAISDGVDFIDC 441 (667)
Q Consensus 409 ~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~ 441 (667)
-+++|-|-+..-+|.-+..+..+++.||+++=+
T Consensus 204 pvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 204 PVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp CEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 567887765444666677788889999987754
No 46
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A
Probab=70.91 E-value=3.7 Score=42.09 Aligned_cols=50 Identities=14% Similarity=-0.016 Sum_probs=36.6
Q ss_pred CEEEEeCCCCCCCCccHHHHHHHHHHcCCCCcEEEeeeeEec-CCeEEEccCCCCcc
Q 005970 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTK-DEAGICFPDLKLDN 147 (667)
Q Consensus 92 ~~iiaHRG~~~~~pENTl~a~~~A~~~g~d~~~vE~Dv~lTk-Dg~~vv~HD~~l~r 147 (667)
.++-+|--+.... ...+..|++.|+. +||+||+-.. .|.+.|.|...+..
T Consensus 32 T~~g~HNSY~~g~----~~~i~~qLd~GVR--~LELDIw~n~~~g~~~V~Hg~~l~~ 82 (339)
T 3h4x_A 32 TSVGVHNAYEKEK----YRYFADALDSGAA--LLELDLWSNALGRSWRVSHSNPLGN 82 (339)
T ss_dssp EEEEETTTTCTTT----CSSHHHHHTTCCS--EEEEEEESSSSSSSCEECSSSCSSC
T ss_pred eEeeccccccccC----cccHHHHHHhCCC--EEEEEeecCCCCCCeEEeCCCcccc
Confidence 4566666432221 4678999999999 9999999874 45799999877644
No 47
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=68.05 E-value=9.9 Score=38.71 Aligned_cols=93 Identities=14% Similarity=0.135 Sum_probs=58.6
Q ss_pred hHHHHHHHHcCCeEEEEec---c-CCCCcccCCCCChH--H-HHHHHHhCCCcccc----eEecCCCCCchhhhhhhhhc
Q 005970 330 TTIVLDAHKERLEVFASNF---A-NDIPISFNYSYDPL--T-EYLSFIDNGDFSVD----GVLSDFPLTPSAAVDCFAHL 398 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTv---n-~~~~~~~~~~~d~~--~-e~~~li~~G~~gVD----GIiTD~P~~~~~~l~~~~~~ 398 (667)
...++.|++.|+.+.+|.+ + ..... ...|+. . -..... +||+| .|=|.||+...++.+.-
T Consensus 166 a~vv~ea~~~GlP~~~ep~~y~r~gg~v~---~~~dp~~Va~aaRiAa---ELGADs~~tivK~~y~e~f~~Vv~a~--- 236 (307)
T 3fok_A 166 AHAVNEAAAAQLPIMLEPFMSNWVNGKVV---NDLSTDAVIQSVAIAA---GLGNDSSYTWMKLPVVEEMERVMEST--- 236 (307)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEEETTEEE---ECCSHHHHHHHHHHHH---TCSSCCSSEEEEEECCTTHHHHGGGC---
T ss_pred HHHHHHHHHcCCcEEEEeeccccCCCCcC---CCCCHHHHHHHHHHHH---HhCCCcCCCEEEeCCcHHHHHHHHhC---
Confidence 4578999999999999832 1 11000 001221 1 122333 56699 99999996554444321
Q ss_pred CcCcccCCceeEEEecCCCC-CCCchhHHHHHHHHH-CCCCeEE
Q 005970 399 GKNASKSANLLVISKNGASG-DYPSCTNLAYQKAIS-DGVDFID 440 (667)
Q Consensus 399 ~~~~~~~~~~~iiaHRG~~~-~~PENTl~Af~~A~~-~Gad~iE 440 (667)
+.|.+++ |+.. .-+|.++...+.|++ .||.++=
T Consensus 237 -------~vPVVia--GG~k~~~~~e~L~~v~~A~~~aGa~Gv~ 271 (307)
T 3fok_A 237 -------TMPTLLL--GGEGGNDPDATFASWEHALTLPGVRGLT 271 (307)
T ss_dssp -------SSCEEEE--CCSCC--CHHHHHHHHHHTTSTTEEEEE
T ss_pred -------CCCEEEe--CCCCCCCHHHHHHHHHHHHHhCCCeEEe
Confidence 3567777 5554 478999999999999 7987763
No 48
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=63.23 E-value=1.2e+02 Score=31.97 Aligned_cols=21 Identities=5% Similarity=-0.015 Sum_probs=16.8
Q ss_pred CChHHHHHHHHcCCeEEEEec
Q 005970 328 PHTTIVLDAHKERLEVFASNF 348 (667)
Q Consensus 328 ~~~~~v~~ah~~Gl~V~~WTv 348 (667)
.+..+++.+-+.|++|..-|=
T Consensus 237 ~n~~LL~~~a~~gkPVilk~G 257 (385)
T 3nvt_A 237 QNFELLKAAGRVDKPILLKRG 257 (385)
T ss_dssp TCHHHHHHHHTSSSCEEEECC
T ss_pred cCHHHHHHHHccCCcEEEecC
Confidence 356788889899999988763
No 49
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=59.51 E-value=89 Score=31.11 Aligned_cols=139 Identities=11% Similarity=0.022 Sum_probs=73.6
Q ss_pred cCCHHHHHHhhCCCceEEeccCchhhhh---cCCcHHHHHHHHHhhcCCceEecC--------CHHHHHHHHhhhCCCCC
Q 005970 205 ILTVQDMARQIKPPGLWLNIQHDAFYAQ---HNLSMRSFVLSVSRSVVVNYISSP--------EVNFLRSIAARFRPSMT 273 (667)
Q Consensus 205 iptL~e~l~~~~~~~~~ieiK~~~~~~~---~~~~~~~~l~~~l~~~~~~~i~SF--------d~~~L~~l~~~~~~~~~ 273 (667)
...|.++|.. .+.++.-|+|....... ...+. ..+.....+.|...|+-- +.+.|+.+++.. +.
T Consensus 40 ~~~f~~al~~-~~~~~IaE~K~asPs~g~i~~~~~p-~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v---~l 114 (272)
T 3qja_A 40 PLDVMAALRE-PGIGVIAEVKRASPSAGALATIADP-AKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV---SI 114 (272)
T ss_dssp CCCHHHHHTS-SSCEEEEEEC-------------CH-HHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC---SS
T ss_pred CCCHHHHHhc-CCCeEEEEEecCCCCCCccCCCCCH-HHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC---CC
Confidence 3467777753 34688999995432221 11222 245566666777655532 356777887764 45
Q ss_pred ceEEEeccCCccCCCCCcchhHHhhcHHHHHh-hcceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCC
Q 005970 274 KLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDI 352 (667)
Q Consensus 274 ~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~ 352 (667)
|++. .+.+- ..| .++.... -|+++......+-+. .-..+++.+++.|+.+++-+-+
T Consensus 115 Pvl~----kdfii----d~~-----qv~~A~~~GAD~VlLi~a~l~~~-------~l~~l~~~a~~lGl~~lvev~t--- 171 (272)
T 3qja_A 115 PVLR----KDFVV----QPY-----QIHEARAHGADMLLLIVAALEQS-------VLVSMLDRTESLGMTALVEVHT--- 171 (272)
T ss_dssp CEEE----ESCCC----SHH-----HHHHHHHTTCSEEEEEGGGSCHH-------HHHHHHHHHHHTTCEEEEEESS---
T ss_pred CEEE----Ccccc----CHH-----HHHHHHHcCCCEEEEecccCCHH-------HHHHHHHHHHHCCCcEEEEcCC---
Confidence 6653 11111 011 0222222 266665421111000 0145789999999998876532
Q ss_pred CcccCCCCChHHHHHHHHhCCCcccceEecCC
Q 005970 353 PISFNYSYDPLTEYLSFIDNGDFSVDGVLSDF 384 (667)
Q Consensus 353 ~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~ 384 (667)
.+++....+.| +|.|-++.
T Consensus 172 ----------~ee~~~A~~~G---ad~IGv~~ 190 (272)
T 3qja_A 172 ----------EQEADRALKAG---AKVIGVNA 190 (272)
T ss_dssp ----------HHHHHHHHHHT---CSEEEEES
T ss_pred ----------HHHHHHHHHCC---CCEEEECC
Confidence 36777778777 99988773
No 50
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=55.72 E-value=25 Score=35.76 Aligned_cols=96 Identities=14% Similarity=0.032 Sum_probs=56.2
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCCh---HHH-HHHHHhCCCcccceEecCCC-------CCchhhhhhhhhc
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDP---LTE-YLSFIDNGDFSVDGVLSDFP-------LTPSAAVDCFAHL 398 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~---~~e-~~~li~~G~~gVDGIiTD~P-------~~~~~~l~~~~~~ 398 (667)
.++++.+++.|+.+++|........ .-..++ ..+ ++.+. ++|+|-|-+.+| +.+.++.+....
T Consensus 145 ~~v~~~~~~~G~p~lv~~~~~g~~v--~~~~~~~~~v~~aa~~a~---~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~- 218 (304)
T 1to3_A 145 KEFNELCHSNGLLSIIEPVVRPPRC--GDKFDREQAIIDAAKELG---DSGADLYKVEMPLYGKGARSDLLTASQRLNG- 218 (304)
T ss_dssp HHHHHHHHTTTCEEEEEEEECCCSS--CSCCCHHHHHHHHHHHHT---TSSCSEEEECCGGGGCSCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHcCCcEEEEEECCCCcc--ccCCChhHHHHHHHHHHH---HcCCCEEEeCCCcCCCCCHHHHHHHHHhccc-
Confidence 4578899999999999987432110 000123 333 44444 455999989887 233333332111
Q ss_pred CcCcccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeE
Q 005970 399 GKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFI 439 (667)
Q Consensus 399 ~~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~i 439 (667)
.-..|.|+.=.|. -+|..+..++.|++.|++++
T Consensus 219 -----~~~~P~Vv~aGG~---~~~~~~~~~~~a~~aGa~Gv 251 (304)
T 1to3_A 219 -----HINMPWVILSSGV---DEKLFPRAVRVAMEAGASGF 251 (304)
T ss_dssp -----TCCSCEEECCTTS---CTTTHHHHHHHHHHTTCCEE
T ss_pred -----cCCCCeEEEecCC---CHHHHHHHHHHHHHcCCeEE
Confidence 0122423333333 47788889999999998665
No 51
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=52.56 E-value=1.5e+02 Score=29.18 Aligned_cols=19 Identities=11% Similarity=0.100 Sum_probs=13.5
Q ss_pred ChHHHHHHHHcCCeEEEEe
Q 005970 329 HTTIVLDAHKERLEVFASN 347 (667)
Q Consensus 329 ~~~~v~~ah~~Gl~V~~WT 347 (667)
+..+++.+-+.|++|..-|
T Consensus 119 n~~ll~~~a~~~kPV~lk~ 137 (262)
T 1zco_A 119 NFELLKEVGKVENPVLLKR 137 (262)
T ss_dssp CHHHHHHHTTSSSCEEEEC
T ss_pred CHHHHHHHHhcCCcEEEec
Confidence 4567777777788887754
No 52
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=52.31 E-value=1.9e+02 Score=28.75 Aligned_cols=188 Identities=9% Similarity=-0.037 Sum_probs=100.4
Q ss_pred ccCCHHHHHHhh---CCCceEEeccCchhhhh---cCCcHHHHHHHHHhhcCCceEec------C--CHHHHHHHHhhhC
Q 005970 204 QILTVQDMARQI---KPPGLWLNIQHDAFYAQ---HNLSMRSFVLSVSRSVVVNYISS------P--EVNFLRSIAARFR 269 (667)
Q Consensus 204 ~iptL~e~l~~~---~~~~~~ieiK~~~~~~~---~~~~~~~~l~~~l~~~~~~~i~S------F--d~~~L~~l~~~~~ 269 (667)
+...|.++|... .+.++.-|+|....... ...+.+ .+.....+.|...|+- | +.+.|+.+++..
T Consensus 42 ~~~~f~~al~~~~~~~~~~vIaE~KraSPSkG~i~~~~dp~-~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v- 119 (272)
T 3tsm_A 42 APRGFLKALEAKRAAGQFALIAEIKKASPSKGLIRPDFDPP-ALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQAC- 119 (272)
T ss_dssp CCCCHHHHHHHHHHTTCCEEEEEECSEETTTEESCSSCCHH-HHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTS-
T ss_pred CCCCHHHHHhhccccCCceEEEEeccCCCCCCccCCCCCHH-HHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhc-
Confidence 345688888753 24689999995443321 122333 4566667777764443 2 667888888765
Q ss_pred CCCCceEEEeccCCccCCCCCcchhHHhhcHHHHHh-hcceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEec
Q 005970 270 PSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNF 348 (667)
Q Consensus 270 ~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTv 348 (667)
+.|++. .+.+. ..| .+.+... -|+++......+-+. .-..+++.+|+.|+.+.+=+-
T Consensus 120 --~lPVl~----Kdfi~----d~~-----qi~ea~~~GAD~VlLi~a~L~~~-------~l~~l~~~a~~lGl~~lvevh 177 (272)
T 3tsm_A 120 --SLPALR----KDFLF----DPY-----QVYEARSWGADCILIIMASVDDD-------LAKELEDTAFALGMDALIEVH 177 (272)
T ss_dssp --SSCEEE----ESCCC----STH-----HHHHHHHTTCSEEEEETTTSCHH-------HHHHHHHHHHHTTCEEEEEEC
T ss_pred --CCCEEE----CCccC----CHH-----HHHHHHHcCCCEEEEcccccCHH-------HHHHHHHHHHHcCCeEEEEeC
Confidence 466542 12111 111 1222222 266655432221100 014589999999999988764
Q ss_pred cCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchh--hhhhhhhcCcCcccCCceeEEEecCCCCCCCchhHH
Q 005970 349 ANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSA--AVDCFAHLGKNASKSANLLVISKNGASGDYPSCTNL 426 (667)
Q Consensus 349 n~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~--~l~~~~~~~~~~~~~~~~~iiaHRG~~~~~PENTl~ 426 (667)
+ .+|+.+.++.| +|-|=+|.-+.-.. -++....+. +.-.....+|+=-|-+ -||
T Consensus 178 ~-------------~eEl~~A~~~g---a~iIGinnr~l~t~~~dl~~~~~L~--~~ip~~~~vIaesGI~--t~e---- 233 (272)
T 3tsm_A 178 D-------------EAEMERALKLS---SRLLGVNNRNLRSFEVNLAVSERLA--KMAPSDRLLVGESGIF--THE---- 233 (272)
T ss_dssp S-------------HHHHHHHTTSC---CSEEEEECBCTTTCCBCTHHHHHHH--HHSCTTSEEEEESSCC--SHH----
T ss_pred C-------------HHHHHHHHhcC---CCEEEECCCCCccCCCChHHHHHHH--HhCCCCCcEEEECCCC--CHH----
Confidence 2 36788888766 99887774332100 011111110 0111234566655432 344
Q ss_pred HHHHHHHCCCCeE
Q 005970 427 AYQKAISDGVDFI 439 (667)
Q Consensus 427 Af~~A~~~Gad~i 439 (667)
-.+++.+.|||++
T Consensus 234 dv~~l~~~Ga~gv 246 (272)
T 3tsm_A 234 DCLRLEKSGIGTF 246 (272)
T ss_dssp HHHHHHTTTCCEE
T ss_pred HHHHHHHcCCCEE
Confidence 4556678898765
No 53
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=40.90 E-value=96 Score=28.96 Aligned_cols=42 Identities=14% Similarity=0.121 Sum_probs=31.3
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecC
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSD 383 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD 383 (667)
..+++.+++.|+++.+-.++.. ++.++++.+.+.| +|.|.++
T Consensus 93 ~~~~~~~~~~g~~~~v~~~~~~---------t~~~~~~~~~~~g---~d~i~v~ 134 (211)
T 3f4w_A 93 QSCIRAAKEAGKQVVVDMICVD---------DLPARVRLLEEAG---ADMLAVH 134 (211)
T ss_dssp HHHHHHHHHHTCEEEEECTTCS---------SHHHHHHHHHHHT---CCEEEEE
T ss_pred HHHHHHHHHcCCeEEEEecCCC---------CHHHHHHHHHHcC---CCEEEEc
Confidence 4689999999999987433321 3456788888777 9999876
No 54
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=38.88 E-value=2.2e+02 Score=29.47 Aligned_cols=32 Identities=3% Similarity=-0.061 Sum_probs=24.3
Q ss_pred CCCEEEEeCCCCCC-CCccHHHHHHHHHHcCCC
Q 005970 90 DPPFVVARGGFSGI-FPDSSSIAYSLTLITSAP 121 (667)
Q Consensus 90 ~~~~iiaHRG~~~~-~pENTl~a~~~A~~~g~d 121 (667)
.+|+|||==|.... --|--..=++.|.+.|+|
T Consensus 4 ~~~~IIAEig~NHnGdle~Ak~lI~~A~~aGad 36 (350)
T 3g8r_A 4 SKPLFIFEMANNHMGNVEHGVALIRAIRESCQG 36 (350)
T ss_dssp -CCEEEEECTTTTTTCSHHHHHHHHHHHHHTTT
T ss_pred CCCEEEEEECCCccCcHHHHHHHHHHHHHhCCc
Confidence 36899998886654 467777777888899997
No 55
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=34.93 E-value=70 Score=30.58 Aligned_cols=98 Identities=6% Similarity=-0.070 Sum_probs=58.3
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCC--ChHHHHHHHHhCCCcccceEecCCCCCchhhhhhhhhcCcCcccCCc
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSY--DPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSAN 407 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~--d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~~ 407 (667)
.++++.+ +.|+-+.+.+..++... ... +.....+.+.+.| +++|..|.|+.+..+++.. ..
T Consensus 8 ~~~~~~~-~~~~~~~~~~~~~~p~~---~~~~~~~~~~a~~~~~~G---~~~i~~~~~~~i~~i~~~~----------~~ 70 (234)
T 1yxy_A 8 EKLMEQL-KGGIIVSCQALPGEPLY---SETGGIMPLMAKAAQEAG---AVGIRANSVRDIKEIQAIT----------DL 70 (234)
T ss_dssp HHHHHHH-TTSCEEECCCCTTSTTC---CTTCCSHHHHHHHHHHHT---CSEEEEESHHHHHHHHTTC----------CS
T ss_pred HHHHHHH-hCCEEEEeeCCCCCCCc---CCccchHHHHHHHHHHCC---CcEeecCCHHHHHHHHHhC----------CC
Confidence 3467777 88888888887644111 011 2334556666655 9999998775544443221 12
Q ss_pred eeEEEecC---CCCCCCchhHHHHHHHHHCCCCeEEccee
Q 005970 408 LLVISKNG---ASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (667)
Q Consensus 408 ~~iiaHRG---~~~~~PENTl~Af~~A~~~Gad~iE~DV~ 444 (667)
|++-.=|+ .....-+++....+.+++.|||.|.++..
T Consensus 71 p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~ 110 (234)
T 1yxy_A 71 PIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCT 110 (234)
T ss_dssp CEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECC
T ss_pred CEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEccc
Confidence 33222122 12234456778889999999998877654
No 56
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=34.37 E-value=18 Score=40.78 Aligned_cols=74 Identities=12% Similarity=0.073 Sum_probs=49.3
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchhhh-hhhhhcCcCcccCCce
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAV-DCFAHLGKNASKSANL 408 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~~l-~~~~~~~~~~~~~~~~ 408 (667)
+++++-+|++|++++.|.--.. +..+-.++++.+-++| |+||=+|+-+.-.+.. +.+.... ...-..+.
T Consensus 350 ~~l~~Ya~~kgV~i~lw~~~~~------~~~~~~~~~~~~~~~G---v~gvK~Df~~~~~Q~~v~~y~~i~-~~aA~~~l 419 (641)
T 3a24_A 350 KELVDYAASKNVGIILWAGYHA------FERDMENVCRHYAEMG---VKGFKVDFMDRDDQEMTAFNYRAA-EMCAKYKL 419 (641)
T ss_dssp HHHHHHHHHTTCEEEEEEEHHH------HHTSHHHHHHHHHHHT---CCEEEEECCCCCSHHHHHHHHHHH-HHHHHTTC
T ss_pred HHHHHHHHhcCCEEEEEeeCcc------hHHHHHHHHHHHHHcC---CCEEEECCCCCCcHHHHHHHHHHH-HHHHHcCC
Confidence 6799999999999999986432 1223456788888777 9999999987654432 2221111 12223457
Q ss_pred eEEEe
Q 005970 409 LVISK 413 (667)
Q Consensus 409 ~iiaH 413 (667)
+|..|
T Consensus 420 ~V~fH 424 (641)
T 3a24_A 420 ILDLH 424 (641)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 88888
No 57
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=33.94 E-value=1.5e+02 Score=29.08 Aligned_cols=100 Identities=13% Similarity=0.075 Sum_probs=54.1
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHH-HHHHHhCCCcccceEecCCCCCchhhhhhhhhcCcCcccCCce
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTE-YLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSANL 408 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e-~~~li~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~~~ 408 (667)
..+++.+++.|+++..|+.-+.....-....+.... .+...+.| +|.|-|-+|..... ++..... . ..-|
T Consensus 128 ~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~G---AD~vkt~~~~~~e~-~~~~~~~----~-~~~p 198 (263)
T 1w8s_A 128 ARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELG---ADAMKIKYTGDPKT-FSWAVKV----A-GKVP 198 (263)
T ss_dssp HHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHT---CSEEEEECCSSHHH-HHHHHHH----T-TTSC
T ss_pred HHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcC---CCEEEEcCCCCHHH-HHHHHHh----C-CCCe
Confidence 346777889999999996532210000000011122 23445555 99999999843222 2222111 1 1212
Q ss_pred eEEEecCCCCCCCchhHHHHHHHHHCCCCeE
Q 005970 409 LVISKNGASGDYPSCTNLAYQKAISDGVDFI 439 (667)
Q Consensus 409 ~iiaHRG~~~~~PENTl~Af~~A~~~Gad~i 439 (667)
|++=-|-+..-+|-.+.-...+++.||+++
T Consensus 199 -V~asGGi~~~~~~~~l~~i~~~~~aGA~Gv 228 (263)
T 1w8s_A 199 -VLMSGGPKTKTEEDFLKQVEGVLEAGALGI 228 (263)
T ss_dssp -EEEECCSCCSSHHHHHHHHHHHHHTTCCEE
T ss_pred -EEEEeCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 334335544456777777888889999865
No 58
>3o27_A Putative uncharacterized protein; swapped-hairpin fold, transcription factor, DNA binding PROT; 2.80A {Sulfolobus islandicus}
Probab=33.41 E-value=22 Score=27.41 Aligned_cols=44 Identities=18% Similarity=0.019 Sum_probs=27.6
Q ss_pred EEeCCCCCC--CCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEEEc
Q 005970 95 VARGGFSGI--FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICF 140 (667)
Q Consensus 95 iaHRG~~~~--~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~vv~ 140 (667)
-+|+|+.|. |-=|=-+.+..|+..--+| .+|+-|- ++||.+|+.
T Consensus 14 ~~~kgg~g~etyYInIPaeI~kaLgIk~gD-~fel~ve-~kdgeIvLc 59 (68)
T 3o27_A 14 RAYKGGSGHTTFYLLIPKDIAEALDIKPDD-TFILNME-QKDGDIVLS 59 (68)
T ss_dssp EEC-----CCCEEEEECHHHHHHTTCCTTC-CEEEEEE-EETTEEEEE
T ss_pred eeeeCCCCceEEEEeCcHHHHHHhCCCCCC-EEEEEEe-cCCCeEEEE
Confidence 579998753 4455557788888766555 7777777 899977654
No 59
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=32.15 E-value=1.5e+02 Score=29.09 Aligned_cols=140 Identities=9% Similarity=0.010 Sum_probs=76.7
Q ss_pred CHHHHHHhhCCCceEEeccCchhhhh---cCCcHHHHHHHHHhhcCCceEec--------CCHHHHHHHHhhhCCCCCce
Q 005970 207 TVQDMARQIKPPGLWLNIQHDAFYAQ---HNLSMRSFVLSVSRSVVVNYISS--------PEVNFLRSIAARFRPSMTKL 275 (667)
Q Consensus 207 tL~e~l~~~~~~~~~ieiK~~~~~~~---~~~~~~~~l~~~l~~~~~~~i~S--------Fd~~~L~~l~~~~~~~~~~~ 275 (667)
.|.++|....+..+..|+|....... ...+.. .+.....+. ...|+. =+.+.|..+++.. +.|+
T Consensus 30 ~f~~al~~~~~~~vIaE~K~aSPSkG~i~~~~~~~-~iA~~y~~~-A~~IsVlTd~~~F~gs~~dL~~ir~~v---~lPv 104 (251)
T 1i4n_A 30 RFLEVLSGKERVKIIAEFKKASPSAGDINADASLE-DFIRMYDEL-ADAISILTEKHYFKGDPAFVRAARNLT---CRPI 104 (251)
T ss_dssp HHHHHHCCSSSCEEEEEECSBCSSSCBSCTTCCHH-HHHHHHHHH-CSEEEEECCCSSSCCCTHHHHHHHTTC---CSCE
T ss_pred CHHHHHhhCCCceEEEeecCCCCCCCccCCCCCHH-HHHHHHHHh-CCceEEEecccccCCCHHHHHHHHHhC---CCCE
Confidence 57777753222679999994322211 111332 233333333 333333 2667888888875 4565
Q ss_pred EEEeccCCccCCCCCcchhHHhhcHHHHHh-hcceecCCCccccccCCCCCCCCChHHHHHHHHcCCeEEEEeccCCCCc
Q 005970 276 VFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPI 354 (667)
Q Consensus 276 ~~~l~~~~~~~~~~~~~y~~~~~~l~~i~~-~a~~i~~~~~~~~~~~~~~~l~~~~~~v~~ah~~Gl~V~~WTvn~~~~~ 354 (667)
+. .+.+. ..|. +.+... -|+.+......+-.. .-..+++.+|+.|+.+.+=+-+
T Consensus 105 Lr----KDfi~----~~~q-----i~ea~~~GAD~ilLi~a~l~~~-------~l~~l~~~a~~lGl~~lvEv~~----- 159 (251)
T 1i4n_A 105 LA----KDFYI----DTVQ-----VKLASSVGADAILIIARILTAE-------QIKEIYEAAEELGMDSLVEVHS----- 159 (251)
T ss_dssp EE----ECCCC----STHH-----HHHHHHTTCSEEEEEGGGSCHH-------HHHHHHHHHHTTTCEEEEEECS-----
T ss_pred EE----eeCCC----CHHH-----HHHHHHcCCCEEEEecccCCHH-------HHHHHHHHHHHcCCeEEEEeCC-----
Confidence 42 22221 1121 222222 256555432221100 1256999999999999998753
Q ss_pred ccCCCCChHHHHHHHHhC-CCcccceEecCCCCC
Q 005970 355 SFNYSYDPLTEYLSFIDN-GDFSVDGVLSDFPLT 387 (667)
Q Consensus 355 ~~~~~~d~~~e~~~li~~-G~~gVDGIiTD~P~~ 387 (667)
.+|+...++. | +|-|-+|.++.
T Consensus 160 --------~eE~~~A~~l~g---~~iIGinnr~l 182 (251)
T 1i4n_A 160 --------REDLEKVFSVIR---PKIIGINTRDL 182 (251)
T ss_dssp --------HHHHHHHHTTCC---CSEEEEECBCT
T ss_pred --------HHHHHHHHhcCC---CCEEEEeCccc
Confidence 3678888877 7 99997777663
No 60
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=29.14 E-value=4.3e+02 Score=26.12 Aligned_cols=29 Identities=0% Similarity=0.090 Sum_probs=19.0
Q ss_pred HHHHHHHhhcCCceEec-CCHHHHHHHHhh
Q 005970 239 SFVLSVSRSVVVNYISS-PEVNFLRSIAAR 267 (667)
Q Consensus 239 ~~l~~~l~~~~~~~i~S-Fd~~~L~~l~~~ 267 (667)
..+.+..++.|+.++++ ||+..+..+.+.
T Consensus 92 ~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~ 121 (276)
T 1vs1_A 92 KLLRRAGDEAGLPVVTEVLDPRHVETVSRY 121 (276)
T ss_dssp HHHHHHHHHHTCCEEEECCCGGGHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEecCCHHHHHHHHHh
Confidence 34556666777765555 677777777665
No 61
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=26.81 E-value=3.2e+02 Score=26.72 Aligned_cols=119 Identities=17% Similarity=0.128 Sum_probs=61.3
Q ss_pred ccCHHHHHHHHHhcCCcceE-EEEeecchhhhhhhcccHHHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHhc-cCC
Q 005970 524 FMKLSDFLEMAKNANSLSGV-LISIENAVYLAEKQGMSVTNSVMEALGNAGYNKQTALKVMIQSTDSSVLMKLREK-TSY 601 (667)
Q Consensus 524 iPtL~EvL~~~~~~~~~~~l-~iEiK~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~v~i~SFd~~~L~~~~~~-p~~ 601 (667)
-|+++..++.++.... -|. .|||=-|-.+.-..|..+.++-...|+ .|+. -..++..+++. .++
T Consensus 24 ~P~~~~t~~~~~~l~~-~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~-~g~~------------~~~~~~~~~~~r~~~ 89 (252)
T 3tha_A 24 YPNLQTSEAFLQRLDQ-SPIDILELGVAYSDPIADGEIIADAAKIALD-QGVD------------IHSVFELLARIKTKK 89 (252)
T ss_dssp SSCHHHHHHHHHTGGG-SSCSEEEEECCCSCCCSCCCHHHHHHHHHHH-TTCC------------HHHHHHHHHHCCCSS
T ss_pred CCCHHHHHHHHHHHHH-cCCCEEEECCCCCCCCCCcHHHHHHHHHHHH-CCCC------------HHHHHHHHHHHhcCC
Confidence 5888888888765421 133 678875432211133444444444444 3444 24566677776 667
Q ss_pred cEEEEeccchhhhhHHHHHHHHHhhhhcCCCeeEEeCCCCCccHHHHHHHHHcCCcE
Q 005970 602 ELVYKVKENIRDALNQTIEDIKKFADSVVLTMSLYLKRGTSSQTQLWRSTHITRELV 658 (667)
Q Consensus 602 ~~~~L~~~~~~~~~~~~l~~~~~~a~~i~~~~~i~~~~~~~~~~~~v~~ah~~Gl~V 658 (667)
|++++.-.+ ..-.-+.+...+.|...|++..+.|.-......++.+.+++.|+.+
T Consensus 90 Pivlm~Y~N--~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~ 144 (252)
T 3tha_A 90 ALVFMVYYN--LIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIAL 144 (252)
T ss_dssp EEEEECCHH--HHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEE
T ss_pred CEEEEeccC--HHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeE
Confidence 777664321 1111123333334444566544544222223456777777777764
No 62
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=26.21 E-value=20 Score=35.88 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=0.0
Q ss_pred CC--chhHHHHHHHHHCCCCeEEcceee---ecCCeEE
Q 005970 420 YP--SCTNLAYQKAISDGVDFIDCPVQM---SKDGVPF 452 (667)
Q Consensus 420 ~P--ENTl~Af~~A~~~Gad~iE~DV~l---TkDg~~V 452 (667)
+| |.|....+...+.|||+||+++-. -.||..|
T Consensus 28 dP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~I 65 (267)
T 3vnd_A 28 DPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVI 65 (267)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHH
No 63
>1xfj_A Conserved hypothetical protein; structural genomics, protein structure initiative (PSI), HYP protein, alpha-beta-BETA-alpha; 1.75A {Caulobacter vibrioides} SCOP: d.194.1.2
Probab=25.81 E-value=16 Score=36.41 Aligned_cols=57 Identities=21% Similarity=0.215 Sum_probs=40.4
Q ss_pred ccceEecCCCCCchhhh--hhhhhcCcCcccCCceeEEEecCCCC---CCCchhHHHHHHHHHCCCC
Q 005970 376 SVDGVLSDFPLTPSAAV--DCFAHLGKNASKSANLLVISKNGASG---DYPSCTNLAYQKAISDGVD 437 (667)
Q Consensus 376 gVDGIiTD~P~~~~~~l--~~~~~~~~~~~~~~~~~iiaHRG~~~---~~PENTl~Af~~A~~~Gad 437 (667)
++||++||.|..+..++ .|..-+- ..+..+..-.+|=|.+| ...|||+.+|+. .|++
T Consensus 94 ~aDalvT~~~g~~l~v~tADC~PVll--~D~~~~~vaa~HAGWrGt~~gI~~~tv~~m~~---~G~~ 155 (261)
T 1xfj_A 94 EGDAVVSKTPGVICGAMAADCAPVLL--VDPEARIVAAAHAGWRGALDGVVQSAVDRMVE---LGAS 155 (261)
T ss_dssp BCSEEEECSTTCEEEEEESSSEEEEE--EETTTTEEEEEEECHHHHHHTHHHHHHHHHHH---TTCC
T ss_pred CCCEEEECCCCCEEEEEecCcccEEE--EeCCCCEEEEecCCchhhHhhHHHHHHHHHHH---cCCC
Confidence 39999999999987665 4554332 12234566788888766 468999999975 6764
No 64
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=25.74 E-value=30 Score=33.54 Aligned_cols=29 Identities=24% Similarity=0.179 Sum_probs=25.8
Q ss_pred CchhHHHHHHHHHCCCCeEEcceeeecCCeEE
Q 005970 421 PSCTNLAYQKAISDGVDFIDCPVQMSKDGVPF 452 (667)
Q Consensus 421 PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~V 452 (667)
.+|.....+.+.+.|+|++++|+ +||..|
T Consensus 16 ~~~l~~~i~~~~~~Gad~ihldi---~DG~fv 44 (230)
T 1tqj_A 16 FSRLGEEIKAVDEAGADWIHVDV---MDGRFV 44 (230)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEE---EBSSSS
T ss_pred HhHHHHHHHHHHHcCCCEEEEEE---EecCCC
Confidence 78999999999999999999999 588655
No 65
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=24.21 E-value=4.7e+02 Score=27.26 Aligned_cols=35 Identities=17% Similarity=0.152 Sum_probs=25.4
Q ss_pred CCCEEEEeCCCCC-CCCccHHHHHHHHHHcCCCCcEEE
Q 005970 90 DPPFVVARGGFSG-IFPDSSSIAYSLTLITSAPSVILW 126 (667)
Q Consensus 90 ~~~~iiaHRG~~~-~~pENTl~a~~~A~~~g~d~~~vE 126 (667)
.+|+|||==|... .--|.-+.-.+.|.+.||| +|-
T Consensus 27 ~~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAd--avK 62 (385)
T 1vli_A 27 APVFIIAEAGINHDGKLDQAFALIDAAAEAGAD--AVK 62 (385)
T ss_dssp SCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCS--EEE
T ss_pred CCcEEEEeecCcccccHHHHHHHHHHHHHhCCC--EEe
Confidence 4789999444222 2467888888999999999 764
No 66
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=22.38 E-value=33 Score=32.89 Aligned_cols=29 Identities=24% Similarity=0.166 Sum_probs=0.0
Q ss_pred CchhHHHHHHHHHCCCCeEEcceeeecCCeEE
Q 005970 421 PSCTNLAYQKAISDGVDFIDCPVQMSKDGVPF 452 (667)
Q Consensus 421 PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~V 452 (667)
++++....+.+.+.|+|+||+|+ +||..|
T Consensus 22 ~~~~~~~i~~~~~~G~d~i~l~~---~dg~f~ 50 (230)
T 1rpx_A 22 FSKLGEQVKAIEQAGCDWIHVDV---MDGRFV 50 (230)
T ss_dssp GGGHHHHHHHHHHTTCCCEEEEE---EBSSSS
T ss_pred HHHHHHHHHHHHHCCCCEEEEee---ccCCcc
No 67
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=21.75 E-value=1e+02 Score=30.88 Aligned_cols=87 Identities=15% Similarity=0.248 Sum_probs=53.7
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCchh---------------hhhh
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSA---------------AVDC 394 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~~~---------------~l~~ 394 (667)
-++++.||+.|+.-.++++|. ++.+.+.+.| +|.|+-.-|-+.-. +.+.
T Consensus 153 ve~I~~A~~~gL~Ti~~v~~~-------------eeA~amA~ag---pDiI~~h~glT~gglIG~~~avs~~~~~e~i~~ 216 (286)
T 2p10_A 153 VEMIAEAHKLDLLTTPYVFSP-------------EDAVAMAKAG---ADILVCHMGLTTGGAIGARSGKSMDDCVSLINE 216 (286)
T ss_dssp HHHHHHHHHTTCEECCEECSH-------------HHHHHHHHHT---CSEEEEECSCC---------CCCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEecCCH-------------HHHHHHHHcC---CCEEEECCCCCCCCcccCCCcccHHHhHHHHHH
Confidence 358999999999999998753 5667777766 99999999932111 1111
Q ss_pred hhhcCcCcccCCceeEEEecCCCCCCCchhHHHHHHHHHC--CCCeE
Q 005970 395 FAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISD--GVDFI 439 (667)
Q Consensus 395 ~~~~~~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~--Gad~i 439 (667)
.... -..-.+.++++.|-|. -..|| =.+++++. |++++
T Consensus 217 i~~a--~~~vnpdvivLc~gGp-Istpe----Dv~~~l~~t~G~~G~ 256 (286)
T 2p10_A 217 CIEA--ARTIRDDIIILSHGGP-IANPE----DARFILDSCQGCHGF 256 (286)
T ss_dssp HHHH--HHHHCSCCEEEEESTT-CCSHH----HHHHHHHHCTTCCEE
T ss_pred HHHH--HHHhCCCcEEEecCCC-CCCHH----HHHHHHhcCCCccEE
Confidence 1110 0122455788888762 22344 44555665 77664
No 68
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=21.22 E-value=48 Score=37.85 Aligned_cols=51 Identities=20% Similarity=0.212 Sum_probs=37.3
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCC
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFP 385 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P 385 (667)
+++++-|++.|+.++.|.--..... +|..+-.++++.+-++| |.||=+||-
T Consensus 421 ~eL~~YA~sKGV~iilw~~t~~~~~--n~e~~~d~~f~~~~~~G---v~GVKvdF~ 471 (738)
T 2d73_A 421 KEIHRYAARKGIKMMMHHETSASVR--NYERHMDKAYQFMADNG---YNSVKSGYV 471 (738)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTBHH--HHHHHHHHHHHHHHHTT---CCEEEEECC
T ss_pred HHHHHHHHhCCCEEEEEEcCCCchh--hHHHHHHHHHHHHHHcC---CCEEEeCcc
Confidence 6799999999999999986432100 01112345778888777 999999999
No 69
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=20.80 E-value=1.1e+02 Score=31.38 Aligned_cols=96 Identities=16% Similarity=0.134 Sum_probs=54.9
Q ss_pred hHHHHHHHHcCCeEEEEecc--CCCCcccCCCCCh---HHHHHHHHhCCCcccceE-ecCC-----CCCchhhhhhhhhc
Q 005970 330 TTIVLDAHKERLEVFASNFA--NDIPISFNYSYDP---LTEYLSFIDNGDFSVDGV-LSDF-----PLTPSAAVDCFAHL 398 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn--~~~~~~~~~~~d~---~~e~~~li~~G~~gVDGI-iTD~-----P~~~~~~l~~~~~~ 398 (667)
...++.+++.|++|.+.... +. ...++ .+..+.+.++| +|.| +-|- |..+.++++....-
T Consensus 140 ~~~v~~ak~~G~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~G---a~~i~l~DT~G~~~P~~v~~lv~~l~~~ 210 (337)
T 3ble_A 140 SFVIEYAIKSGLKINVYLEDWSNG------FRNSPDYVKSLVEHLSKEH---IERIFLPDTLGVLSPEETFQGVDSLIQK 210 (337)
T ss_dssp HHHHHHHHHTTCEEEEEEETHHHH------HHHCHHHHHHHHHHHHTSC---CSEEEEECTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEEEECCCC------CcCCHHHHHHHHHHHHHcC---CCEEEEecCCCCcCHHHHHHHHHHHHHh
Confidence 34789999999999876532 01 00011 23456666655 9988 5453 55555555544321
Q ss_pred CcCcccCCceeEEEecCCCCCCCchhHHHHHHHHHCCCCeEEcce
Q 005970 399 GKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPV 443 (667)
Q Consensus 399 ~~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV 443 (667)
.+.-+.-+-+|-- .|.+.-|+++| ++.||+.|+.=|
T Consensus 211 ----~p~~~i~~H~Hnd-~GlA~AN~laA----v~aGa~~vd~tv 246 (337)
T 3ble_A 211 ----YPDIHFEFHGHND-YDLSVANSLQA----IRAGVKGLHASI 246 (337)
T ss_dssp ----CTTSCEEEECBCT-TSCHHHHHHHH----HHTTCSEEEEBG
T ss_pred ----cCCCeEEEEecCC-cchHHHHHHHH----HHhCCCEEEEec
Confidence 1123344445542 35677777776 567999887543
No 70
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=20.45 E-value=1e+02 Score=27.49 Aligned_cols=50 Identities=10% Similarity=0.149 Sum_probs=33.0
Q ss_pred hHHHHHHHHcCCeEEEEeccCCCCcccCCCCChHHHHHHHHhCCCcccceEecCCCCCc
Q 005970 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTP 388 (667)
Q Consensus 330 ~~~v~~ah~~Gl~V~~WTvn~~~~~~~~~~~d~~~e~~~li~~G~~gVDGIiTD~P~~~ 388 (667)
.+.++.++++|..|..+|-+.. ....++..+++.-++..+.|.-|+|+..
T Consensus 30 ~~al~~l~~~G~~iii~TgR~~---------~~~~~~~~~l~~~gi~~~~I~~n~P~~~ 79 (142)
T 2obb_A 30 VETLKLLQQEKHRLILWSVREG---------ELLDEAIEWCRARGLEFYAANKDYPEEE 79 (142)
T ss_dssp HHHHHHHHHTTCEEEECCSCCH---------HHHHHHHHHHHTTTCCCSEESSSSTTC-
T ss_pred HHHHHHHHHCCCEEEEEeCCCc---------ccHHHHHHHHHHcCCCeEEEEcCCchhh
Confidence 5689999999999999998642 1234455555532233456777778753
No 71
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=20.07 E-value=49 Score=32.01 Aligned_cols=30 Identities=13% Similarity=-0.109 Sum_probs=25.6
Q ss_pred CCccHHHHHHHHHHcCCCCcEEEeeeeEecCCeEE
Q 005970 104 FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGI 138 (667)
Q Consensus 104 ~pENTl~a~~~A~~~g~d~~~vE~Dv~lTkDg~~v 138 (667)
..+|..+..+.+.+.|+| ++++|+ +||..|
T Consensus 15 D~~~l~~~i~~~~~~Gad--~ihldi---~DG~fv 44 (230)
T 1tqj_A 15 DFSRLGEEIKAVDEAGAD--WIHVDV---MDGRFV 44 (230)
T ss_dssp CGGGHHHHHHHHHHTTCS--EEEEEE---EBSSSS
T ss_pred CHhHHHHHHHHHHHcCCC--EEEEEE---EecCCC
Confidence 378999999999999999 999999 466544
No 72
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=20.03 E-value=43 Score=32.19 Aligned_cols=29 Identities=14% Similarity=0.188 Sum_probs=0.0
Q ss_pred CchhHHHHHHHHHCCCCeEEcceeeecCCeEE
Q 005970 421 PSCTNLAYQKAISDGVDFIDCPVQMSKDGVPF 452 (667)
Q Consensus 421 PENTl~Af~~A~~~Gad~iE~DV~lTkDg~~V 452 (667)
..|+....+.+.+.|+|++++|+ +||..|
T Consensus 18 ~~~l~~~i~~~~~~Gad~i~l~i---~Dg~fv 46 (228)
T 1h1y_A 18 FANLAAEADRMVRLGADWLHMDI---MDGHFV 46 (228)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEE---EBSSSS
T ss_pred HHHHHHHHHHHHHcCCCEEEEEE---ecCCcC
Done!