BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005977
(666 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255578453|ref|XP_002530091.1| conserved hypothetical protein [Ricinus communis]
gi|223530402|gb|EEF32290.1| conserved hypothetical protein [Ricinus communis]
Length = 697
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/702 (66%), Positives = 559/702 (79%), Gaps = 43/702 (6%)
Query: 1 MAVLLSTTITTTLNL----NVASKPE-IPETKVDFLAGNFTSPLHFPSLFNTC--LLPYL 53
MA+LLSTT T L+L N ++ E P F + + F T L+P +
Sbjct: 1 MAILLSTTAATKLSLKFLDNHGNRQEKSPTFHSIFTGKSLVHCISLKPFFFTLIHLVPKV 60
Query: 54 R-------------------NKKRLSLISLAVKNRSNSEATVNSYGKINKPRKGSGNTLI 94
R KR S ++ A+KN+++ + S+ KI PRKG G L+
Sbjct: 61 RPMVKKPLSLCSGWSIESKTENKRFSFVNFAIKNKTSIDLKQGSHSKI-APRKG-GRDLV 118
Query: 95 LSEGRDEDEHYGPVCPGCGIFMQDKDPNLPGYYKQKKDIERNEEFLEDEEGIENDIEGFE 154
LSEGRDED+ YG +CPGCGIFMQDKDP+LPGYY+++K + E +E+EE +D
Sbjct: 119 LSEGRDEDDKYGSICPGCGIFMQDKDPSLPGYYQKRKLTIESGEVVENEEMGFDDDFEGF 178
Query: 155 EDI-------VDGNFDQSDGKESDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPAG 207
E ++G F++SDG+ D +GD FD WDSDE+EA F E++D LDLDGFTPAG
Sbjct: 179 EGEEEGFESGIEGKFEKSDGERDDFEEGDEFD-WDSDEFEAMF--EEDDSLDLDGFTPAG 235
Query: 208 VGYGNITEELVERSKKKK----LSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNE 263
VGYGNITEE++E+ KKKK +SKAE+K++AREA+KEK EVTVCARCHSLRNYGQVK++
Sbjct: 236 VGYGNITEEIIEKEKKKKEERKVSKAEKKRRAREAKKEKDEVTVCARCHSLRNYGQVKSQ 295
Query: 264 VAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAK 323
AENLIPDFDFD++I+TRL+KPS NANA VV+MVVDCVDFDG FPK AA SLFK LE K
Sbjct: 296 TAENLIPDFDFDKLISTRLIKPSSNANATVVIMVVDCVDFDGSFPKLAAMSLFKALEGTK 355
Query: 324 DDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLG 383
+D K SK+LPKLVLV TKVDLLPSQ+SP RLD+WVRHRA+A GAPKL+GVYLVS+RKDLG
Sbjct: 356 NDPKTSKRLPKLVLVATKVDLLPSQISPARLDKWVRHRARAAGAPKLSGVYLVSSRKDLG 415
Query: 384 VRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILR 443
VRNLL+F+KELAGPRGNVWVIGAQNAGKSTLIN FAKKEG K+SKLTEAP+PGTTLGILR
Sbjct: 416 VRNLLSFVKELAGPRGNVWVIGAQNAGKSTLINAFAKKEGAKISKLTEAPVPGTTLGILR 475
Query: 444 IGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLM 503
IGGIL AKAK+YDTPGLLHP+LMSMRLNR+EQKMVEIRKELQ RTYR K GQAVHVGGL+
Sbjct: 476 IGGILSAKAKMYDTPGLLHPYLMSMRLNREEQKMVEIRKELQARTYRAKVGQAVHVGGLL 535
Query: 504 RLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWK 563
RLDL+QASVETIY+TVWASP+VSLHLGK+ENA++ WKNH G+RLQPP+G+DRASELG W+
Sbjct: 536 RLDLNQASVETIYITVWASPSVSLHLGKMENANDFWKNHAGVRLQPPVGEDRASELGEWE 595
Query: 564 DRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFL 623
+R++KV+GTSWDVN IDIA AGLGWFSL LKGEA+LTLW YDGI+ITLREPLVLDRA FL
Sbjct: 596 EREIKVTGTSWDVNHIDIAIAGLGWFSLCLKGEATLTLWIYDGIQITLREPLVLDRASFL 655
Query: 624 ERPGFWLPKAISDALGSKSKLEAKRRKKLE-ETEDFLSEVSA 664
ERPGFWLPKAISD +G+++K+E+++RKKLE E+ + LSEVSA
Sbjct: 656 ERPGFWLPKAISDTIGNQTKVESQKRKKLEQESMESLSEVSA 697
>gi|224090037|ref|XP_002308915.1| predicted protein [Populus trichocarpa]
gi|222854891|gb|EEE92438.1| predicted protein [Populus trichocarpa]
Length = 640
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/627 (73%), Positives = 531/627 (84%), Gaps = 20/627 (3%)
Query: 54 RNKKRLSLISLAVKNRSNSEATVNSYGKINKPRKGSGNTLILSEGRDEDEHYGPVCPGCG 113
++KKRL L++ KN+++ E + KI PR+G G L+LSEGR+EDE+YGP+CPGCG
Sbjct: 18 KHKKRLCLVNFVAKNQTSIETKQRGHAKIG-PRRG-GKDLVLSEGREEDENYGPICPGCG 75
Query: 114 IFMQDKDPNLPGYYKQKKDI-ERNEEFL----------EDEEGIENDIEGFEEDIVDGNF 162
+FMQDKDPNLPGYYK+++ I ERNE E E+G E D E E D V+G
Sbjct: 76 VFMQDKDPNLPGYYKKREVIVERNEVVEEGGEEEYVVDEFEDGFEGDEEKLE-DAVEGKL 134
Query: 163 DQSDGKESDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSK 222
++SDGKE + FD DSDE+E E+ DD DLDGF PAGVGYGNITEE++E+ +
Sbjct: 135 EKSDGKEGNLETWAGFD-LDSDEFEPFLEDEEGDDSDLDGFIPAGVGYGNITEEIIEKQR 193
Query: 223 KKK----LSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVI 278
+KK +SKAERK+ ARE++KEK EVTVCARCHSLRNYGQVKN+ AENLIPDFDFDR+I
Sbjct: 194 RKKEQKKVSKAERKRLARESKKEKDEVTVCARCHSLRNYGQVKNQTAENLIPDFDFDRLI 253
Query: 279 ATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLV 338
TRLMKPSG+ N VVVMVVDCVDFDG FPKRAA+SLFK LE KDD + SKKLPKLVLV
Sbjct: 254 TTRLMKPSGSGNVTVVVMVVDCVDFDGSFPKRAAQSLFKALEGVKDDPRTSKKLPKLVLV 313
Query: 339 GTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPR 398
GTKVDLLPSQ+SPTRLDRWVRHRA+A GAPKL+GVYLVS+ KD+GVRNLL+FIKELAGPR
Sbjct: 314 GTKVDLLPSQISPTRLDRWVRHRARAAGAPKLSGVYLVSSCKDVGVRNLLSFIKELAGPR 373
Query: 399 GNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTP 458
GNVWVIGAQNAGKSTLIN AKK G KV+KLTEAP+PGTT+GILRIGGIL AKAK+YDTP
Sbjct: 374 GNVWVIGAQNAGKSTLINALAKKGGAKVTKLTEAPVPGTTVGILRIGGILSAKAKMYDTP 433
Query: 459 GLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVT 518
GLLHP+LMSMRLNRDEQKMVEIRKELQPRTYRVK GQ +HVGGL+RLDL+QASV+TIYVT
Sbjct: 434 GLLHPYLMSMRLNRDEQKMVEIRKELQPRTYRVKAGQTIHVGGLLRLDLNQASVQTIYVT 493
Query: 519 VWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNG 578
VWASPNVSLH+GK+ENADE WKNH+G+RLQPP G+DRASELG W++R++KVSGTSWD N
Sbjct: 494 VWASPNVSLHIGKMENADEFWKNHIGVRLQPPTGEDRASELGKWEEREIKVSGTSWDANS 553
Query: 579 IDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDAL 638
IDI+ AGLGWFS+GLKGEA+LTLWTYDGIEITLREPLVLDRAPFLERPGF LPKAISDA+
Sbjct: 554 IDISIAGLGWFSVGLKGEATLTLWTYDGIEITLREPLVLDRAPFLERPGFLLPKAISDAI 613
Query: 639 GSKSKLEAKRRKKLEETE-DFLSEVSA 664
G+++KLEAK RKKL+E+ DFLSEVS
Sbjct: 614 GNQTKLEAKIRKKLQESSLDFLSEVST 640
>gi|359481892|ref|XP_002274571.2| PREDICTED: uncharacterized protein yqeH-like [Vitis vinifera]
Length = 641
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/602 (74%), Positives = 519/602 (86%), Gaps = 13/602 (2%)
Query: 72 SEATVNSYGKIN--KPRKGSGNTLILSEGRDEDEHYGPVCPGCGIFMQDKDPNLPGYYKQ 129
S+ T+ K N PRK GN ILSEG+DEDE YG +CPGCG++MQD+DPNLPGYY++
Sbjct: 42 SKYTIQETQKNNWKNPRKVGGNP-ILSEGKDEDESYGQICPGCGVYMQDEDPNLPGYYQK 100
Query: 130 KK-DIERNEEFLEDEEGIENDIEGFEE-DIVD---GNFDQSDGKESDSG--DGDVFDDWD 182
+K + E ED EG+ D G EE D+VD F+ SDG+ES+ G DG+ FD WD
Sbjct: 101 RKLTLTEMPEGQEDMEGLWVDELGSEEEDVVDDIESKFEGSDGEESNLGTEDGNEFD-WD 159
Query: 183 SDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEK 242
SDEWE++ GED+D F PAGVGYGNITEE + + KKK++SK+E+K+ AREA+KE+
Sbjct: 160 SDEWESELEGEDDDLDLDG-FAPAGVGYGNITEETINKRKKKRVSKSEKKRMAREAEKER 218
Query: 243 GEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVD 302
EVTVCARCHSLRNYGQVKN++AENLIPDFDFDR+IATRLMKP+G A+A VVVMVVDCVD
Sbjct: 219 EEVTVCARCHSLRNYGQVKNQMAENLIPDFDFDRLIATRLMKPTGTADATVVVMVVDCVD 278
Query: 303 FDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA 362
FDG FPKRAAKSLFK LE ++ AK+S+KLPKLVLV TKVDLLPSQ+SPTRLDRWVR+RA
Sbjct: 279 FDGSFPKRAAKSLFKALEGSRVGAKVSRKLPKLVLVATKVDLLPSQISPTRLDRWVRNRA 338
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE 422
KAGGAPKL+GVYLVSARKDLGVRNLL+FIKELAGPRGNVWVIG+QNAGKSTLINTFAK+E
Sbjct: 339 KAGGAPKLSGVYLVSARKDLGVRNLLSFIKELAGPRGNVWVIGSQNAGKSTLINTFAKRE 398
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
GVK++KLTEA +PGTTLGILRIGGIL AKAK+YDTPGLLHP+LMSMRLNRDEQKM EIRK
Sbjct: 399 GVKLTKLTEAAVPGTTLGILRIGGILSAKAKMYDTPGLLHPYLMSMRLNRDEQKMAEIRK 458
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
ELQPRTYR+K GQAVHVGGLMRLDL+QASVETIYVT+WASPNVSLH+GKIENADEIW+ H
Sbjct: 459 ELQPRTYRMKAGQAVHVGGLMRLDLNQASVETIYVTIWASPNVSLHMGKIENADEIWRKH 518
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
VG+RLQPP+ DR SE+G W+++++KVSG SWDVN IDIA AGLGWFSLGLKGEA+L LW
Sbjct: 519 VGVRLQPPVRVDRVSEIGKWEEQEIKVSGASWDVNSIDIAVAGLGWFSLGLKGEATLALW 578
Query: 603 TYDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRRKK-LEETEDFLSE 661
TYDGIE+ LREPLVLDRAPFLERPGFWLPKAISDA+G++SKLEA+ RK+ EE+ LSE
Sbjct: 579 TYDGIEVILREPLVLDRAPFLERPGFWLPKAISDAIGNQSKLEAEARKRDQEESTKSLSE 638
Query: 662 VS 663
+S
Sbjct: 639 MS 640
>gi|449446267|ref|XP_004140893.1| PREDICTED: uncharacterized protein YqeH-like [Cucumis sativus]
Length = 648
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/597 (71%), Positives = 499/597 (83%), Gaps = 12/597 (2%)
Query: 62 ISLAVKNRSNSEATVNSYGKINKPRKGSGNTLILSEGRDEDEHYGPVCPGCGIFMQDKDP 121
ISLAVK++ + + KI KG +LSEGRDEDE G +CPGCG+FMQD+DP
Sbjct: 49 ISLAVKSQ---QIVRTTSSKIQG--KGRTKDSVLSEGRDEDEQNGDICPGCGVFMQDEDP 103
Query: 122 NLPGYYKQKKDIERNEEFLEDEEGIENDIEGF-EEDIVDGNFDQSDGKESDSGDGDVFDD 180
N+ G+Y QK+ + E +ED E +E++ G + D+VD + E ++ D + +D
Sbjct: 104 NVLGFY-QKRKVSLTEP-MEDGEDVEDEFYGIVDSDVVDEEENSDVVDEEENSDAEEIED 161
Query: 181 ---WDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKARE 237
WDSDEWEAK + ++E++L+LDGF PA VGYGNITEE V+R++KK++SK+E+K++ARE
Sbjct: 162 GFDWDSDEWEAKLMEDEENNLELDGFAPADVGYGNITEETVKRAEKKRISKSEKKRRARE 221
Query: 238 AQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMV 297
AQKE EVTVCARCHSLRNYGQVKN+ AENLIPDFDFDR++A RLMK + N N VVVMV
Sbjct: 222 AQKEIEEVTVCARCHSLRNYGQVKNQAAENLIPDFDFDRLMANRLMKSTSNLN-NVVVMV 280
Query: 298 VDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
VDCVDFDG FPKRAAKSLFK LE K+D K+ KKLPKLVLV TKVDLLPSQ+SPTRLDRW
Sbjct: 281 VDCVDFDGSFPKRAAKSLFKALEGNKNDPKMGKKLPKLVLVATKVDLLPSQISPTRLDRW 340
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
VRHRAKA GAPKL GVYLVS+RKD+GV+NLL+FIKELAGPRGNVWVIGAQNAGKSTLIN
Sbjct: 341 VRHRAKAAGAPKLAGVYLVSSRKDVGVKNLLSFIKELAGPRGNVWVIGAQNAGKSTLINA 400
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
AKKE KV+KLTEAPIPGTTLGILRIGGIL AKAKL+DTPGLLHP+L+SMRLNR+EQKM
Sbjct: 401 LAKKERAKVTKLTEAPIPGTTLGILRIGGILSAKAKLFDTPGLLHPYLVSMRLNREEQKM 460
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
VEIRKELQPRTYRVK Q VHVGGL+RLDL+QASVETIYVTVWASPNVSLHLGKIENADE
Sbjct: 461 VEIRKELQPRTYRVKARQTVHVGGLVRLDLNQASVETIYVTVWASPNVSLHLGKIENADE 520
Query: 538 IWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEA 597
IWK H GIRLQPPIG DRASE+G W +R++K+SGTSW VN IDI+ AGLGWFSLGLKGEA
Sbjct: 521 IWKKHAGIRLQPPIGVDRASEIGKWAEREVKISGTSWVVNSIDISIAGLGWFSLGLKGEA 580
Query: 598 SLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRRKKLEE 654
+LTLW +GIE+T+REPLVLDRA F+ERPGFWL KAIS+ +G+++KL+A+RR +EE
Sbjct: 581 TLTLWIDNGIEVTMREPLVLDRATFIERPGFWLSKAISNTIGNETKLDAQRRISVEE 637
>gi|297739886|emb|CBI30068.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/666 (68%), Positives = 541/666 (81%), Gaps = 33/666 (4%)
Query: 1 MAVLLSTTITTTLNLNVASKPEIPETKVDFLAGNFTSPLHFPSLFNTCLLPYLRNKKRLS 60
MA+LLS+ + ++ P + E V + GN T+ LF +N + S
Sbjct: 1 MAILLSSVSLHSTGAKLS--PVLFEDGV--IEGNSTATFR---LFTGMRKNSRKNDIKFS 53
Query: 61 LISLAVKNRSNSEATVNSYGKINKPRKGSGNTLILSEGRDEDEHYGPVCPGCGIFMQDKD 120
++L+VK++ + T + K PRK GN ILSEG+DEDE YG +CPGCG++MQD+D
Sbjct: 54 FVALSVKSKYTIQETQKNNWK--NPRKVGGNP-ILSEGKDEDESYGQICPGCGVYMQDED 110
Query: 121 PNLPGYYKQKKDIERNEEFLEDEEGIENDIEGFEEDIVDGNFDQSDGKESDSG--DGDVF 178
PNLPGYY+++K E EG E D+EG SDG+ES+ G DG+ F
Sbjct: 111 PNLPGYYQKRKLT-----LTEMPEGQE-DMEG------------SDGEESNLGTEDGNEF 152
Query: 179 DDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREA 238
D WDSDEWE++ GED+D F PAGVGYGNITEE + + KKK++SK+E+K+ AREA
Sbjct: 153 D-WDSDEWESELEGEDDDLDLDG-FAPAGVGYGNITEETINKRKKKRVSKSEKKRMAREA 210
Query: 239 QKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVV 298
+KE+ EVTVCARCHSLRNYGQVKN++AENLIPDFDFDR+IATRLMKP+G A+A VVVMVV
Sbjct: 211 EKEREEVTVCARCHSLRNYGQVKNQMAENLIPDFDFDRLIATRLMKPTGTADATVVVMVV 270
Query: 299 DCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWV 358
DCVDFDG FPKRAAKSLFK LE ++ AK+S+KLPKLVLV TKVDLLPSQ+SPTRLDRWV
Sbjct: 271 DCVDFDGSFPKRAAKSLFKALEGSRVGAKVSRKLPKLVLVATKVDLLPSQISPTRLDRWV 330
Query: 359 RHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF 418
R+RAKAGGAPKL+GVYLVSARKDLGVRNLL+FIKELAGPRGNVWVIG+QNAGKSTLINTF
Sbjct: 331 RNRAKAGGAPKLSGVYLVSARKDLGVRNLLSFIKELAGPRGNVWVIGSQNAGKSTLINTF 390
Query: 419 AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMV 478
AK+EGVK++KLTEA +PGTTLGILRIGGIL AKAK+YDTPGLLHP+LMSMRLNRDEQKM
Sbjct: 391 AKREGVKLTKLTEAAVPGTTLGILRIGGILSAKAKMYDTPGLLHPYLMSMRLNRDEQKMA 450
Query: 479 EIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEI 538
EIRKELQPRTYR+K GQAVHVGGLMRLDL+QASVETIYVT+WASPNVSLH+GKIENADEI
Sbjct: 451 EIRKELQPRTYRMKAGQAVHVGGLMRLDLNQASVETIYVTIWASPNVSLHMGKIENADEI 510
Query: 539 WKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEAS 598
W+ HVG+RLQPP+ DR SE+G W+++++KVSG SWDVN IDIA AGLGWFSLGLKGEA+
Sbjct: 511 WRKHVGVRLQPPVRVDRVSEIGKWEEQEIKVSGASWDVNSIDIAVAGLGWFSLGLKGEAT 570
Query: 599 LTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRRKK-LEETED 657
L LWTYDGIE+ LREPLVLDRAPFLERPGFWLPKAISDA+G++SKLEA+ RK+ EE+
Sbjct: 571 LALWTYDGIEVILREPLVLDRAPFLERPGFWLPKAISDAIGNQSKLEAEARKRDQEESTK 630
Query: 658 FLSEVS 663
LSE+S
Sbjct: 631 SLSEMS 636
>gi|449494174|ref|XP_004159469.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein YqeH-like
[Cucumis sativus]
Length = 648
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/597 (71%), Positives = 499/597 (83%), Gaps = 12/597 (2%)
Query: 62 ISLAVKNRSNSEATVNSYGKINKPRKGSGNTLILSEGRDEDEHYGPVCPGCGIFMQDKDP 121
ISLAVK++ T + KI KG +LSEGRDEDE G +CPGCG+FMQD+DP
Sbjct: 49 ISLAVKSQQIVRTTSS---KIQG--KGRTKDSVLSEGRDEDEQNGDICPGCGVFMQDEDP 103
Query: 122 NLPGYYKQKKDIERNEEFLEDEEGIENDIEGF-EEDIVDGNFDQSDGKESDSGDGDVFDD 180
N+ G+Y QK+ + E +ED E +E++ G + D+VD + E ++ D + +D
Sbjct: 104 NVLGFY-QKRKVSLTEP-MEDGEDVEDEFYGIVDSDVVDEEENSDVVDEEENSDAEEIED 161
Query: 181 ---WDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKARE 237
WDSDEWEAK + ++E++L+LDGF PA VGYGNITEE V+R++KK++SK+E+K++ARE
Sbjct: 162 GFDWDSDEWEAKLMEDEENNLELDGFAPADVGYGNITEETVKRAEKKRISKSEKKRRARE 221
Query: 238 AQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMV 297
AQKE EVTVCARCH LRNYGQVKN+ AENLIPDFDFDR++A RLMK + N N VVVMV
Sbjct: 222 AQKEIEEVTVCARCHXLRNYGQVKNQAAENLIPDFDFDRLMANRLMKSTSNLN-NVVVMV 280
Query: 298 VDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
VDCVDFDG FPKRAAKSLFK LE K+D K+ KKLPKLVLV TKVDLLPSQ+SPTRLDRW
Sbjct: 281 VDCVDFDGSFPKRAAKSLFKALEGNKNDPKMGKKLPKLVLVATKVDLLPSQISPTRLDRW 340
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
VRHRAKA GAPKL GVYLVS+RKD+GV+NLL+FIKELAGPRGNVWVIGAQNAGKSTLIN
Sbjct: 341 VRHRAKAAGAPKLAGVYLVSSRKDVGVKNLLSFIKELAGPRGNVWVIGAQNAGKSTLINA 400
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
AKK+G KV+KLTEAPIPGTTLGILRIGGIL AKAKL+DTPGLLHP+L+SMRLNR+EQKM
Sbjct: 401 LAKKKGXKVTKLTEAPIPGTTLGILRIGGILSAKAKLFDTPGLLHPYLVSMRLNREEQKM 460
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
VEIRKELQPRTYRVK Q VHVGGL+RLDL+QASVETIYVTVWASPNVSLHLGKIENADE
Sbjct: 461 VEIRKELQPRTYRVKARQTVHVGGLVRLDLNQASVETIYVTVWASPNVSLHLGKIENADE 520
Query: 538 IWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEA 597
IWK H GIRLQPPIG DRASE+G W +R++K+SGTSW VN IDI+ AGLGWFSLGLKGEA
Sbjct: 521 IWKKHAGIRLQPPIGVDRASEIGKWAEREVKISGTSWVVNSIDISIAGLGWFSLGLKGEA 580
Query: 598 SLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRRKKLEE 654
+LTLW +GIE+T+REPLVLDRA F+ERPGFWL KAIS+ +G+++KL+A+RR +EE
Sbjct: 581 TLTLWIDNGIEVTMREPLVLDRATFIERPGFWLSKAISNTIGNETKLDAQRRISVEE 637
>gi|357509569|ref|XP_003625073.1| hypothetical protein MTR_7g090640 [Medicago truncatula]
gi|355500088|gb|AES81291.1| hypothetical protein MTR_7g090640 [Medicago truncatula]
Length = 631
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/657 (67%), Positives = 522/657 (79%), Gaps = 43/657 (6%)
Query: 1 MAVLLSTTITTTLNLNVASKPEIPETKVDFLAGNFTSPLHFPSLF--NTCLLPYLRNKKR 58
MA+L ST + N+ +K+ L N TS H F NT R K
Sbjct: 1 MAILFSTIALPSTNVT---------SKLSIL--NNTSHSHALRHFSGNTTK----RFHKA 45
Query: 59 LSLISLAVKNRSNSEATVNSYGKINKPRKGSGNTLILSEGRDEDEHYGPVCPGCGIFMQD 118
S I+ AVKN T PR+ S N L LSEGRDEDE GP+CPGCGIFMQD
Sbjct: 46 SSFIAFAVKNNPTIRKTT--------PRRDSRNPL-LSEGRDEDEALGPICPGCGIFMQD 96
Query: 119 KDPNLPGYYKQKKDIERNEEFLEDEEGIENDIEGFEEDIVDGNFDQSDGKESDSGDGDVF 178
DPNLPG+Y+QK E IE F E+ + + ++ DG+E D+G D
Sbjct: 97 NDPNLPGFYQQK----------------EVKIETFSEEDYELDDEEDDGEEEDNGSIDDE 140
Query: 179 DDWDSDEWEAKFLGEDEDD-LDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKARE 237
DWDS+E EA LGE+ DD +DLDGFT AGVGYGN+TEE++ER+KKKK+SKAE+K+ ARE
Sbjct: 141 SDWDSEELEAMLLGEENDDKVDLDGFTHAGVGYGNVTEEVLERAKKKKVSKAEKKRMARE 200
Query: 238 AQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMV 297
A+K K EVTVCARCHSLRNYGQVKN +AENLIPDFDFDR+I TRLM P+G+ ++ VVVMV
Sbjct: 201 AEKVKEEVTVCARCHSLRNYGQVKNYMAENLIPDFDFDRLITTRLMNPAGSGSSTVVVMV 260
Query: 298 VDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
VDCVDFDG FP+ A KSLFK LE +++ K KKLPKLVLV TKVDLLPSQVSPTRLDRW
Sbjct: 261 VDCVDFDGSFPRTAVKSLFKALEGMQENTKKGKKLPKLVLVATKVDLLPSQVSPTRLDRW 320
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
VRHRA AGGAPKL+ VYLVS+RKDLGVRN+L+F+K+LAGPRGNVWVIGAQNAGKSTLIN
Sbjct: 321 VRHRASAGGAPKLSAVYLVSSRKDLGVRNVLSFVKDLAGPRGNVWVIGAQNAGKSTLINA 380
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
FAKKEG KV+KLTEAP+PGTTLGILRI GIL AKAK++DTPGLLHP+L+SMRLNR+EQKM
Sbjct: 381 FAKKEGAKVTKLTEAPVPGTTLGILRIAGILSAKAKMFDTPGLLHPYLLSMRLNREEQKM 440
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
VEIRKEL+PR+YR+K GQA+HVGGL RLDL +ASV+T+YVTVWASPNVSLH+GKIENA+E
Sbjct: 441 VEIRKELKPRSYRIKAGQAIHVGGLARLDLIEASVQTMYVTVWASPNVSLHMGKIENANE 500
Query: 538 IWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEA 597
IW NHVG+RLQPPIG DRA+ELGTWK+R++KVSG+SWDVN +D++ AGLGWFSLG++GEA
Sbjct: 501 IWNNHVGVRLQPPIGNDRAAELGTWKEREVKVSGSSWDVNCMDVSIAGLGWFSLGIQGEA 560
Query: 598 SLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRRKKLEE 654
++ LWT DGIEITLREPLVLDRAP LE+PGFWLPKAIS+ +G+++KLEA+RRKKLE+
Sbjct: 561 TMKLWTNDGIEITLREPLVLDRAPSLEKPGFWLPKAISEVIGNQTKLEAQRRKKLED 617
>gi|356503413|ref|XP_003520504.1| PREDICTED: uncharacterized protein yqeH-like [Glycine max]
Length = 635
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/658 (65%), Positives = 511/658 (77%), Gaps = 38/658 (5%)
Query: 1 MAVLLSTTITTTLNLNVASKPEIPETKVDFLAGNFTSPLHFPSLFNTCLLPYLRNKKRLS 60
M +LLST I +P TK+ N T P+ F R +K S
Sbjct: 1 MTMLLSTII-------------VPSTKLIIFNNNNTQERALPT-FRHFSDSSKRFEKVSS 46
Query: 61 LISLAVKNRSNSEATVNSYGKINKPRKGSGNTLILSEGRDEDEHYGPVCPGCGIFMQDKD 120
I+ AV S ++ K R GS N L +SEGRDEDE GP+CPGCG+FMQDKD
Sbjct: 47 FIAFAVNGGS-------AHVKATHRRDGSRNPL-MSEGRDEDEARGPICPGCGVFMQDKD 98
Query: 121 PNLPGYYKQKK-DIERNEEFLEDEEGIENDIEGFEEDIVDGNFDQSDGKESDSGDGDVFD 179
PN GYY+ +K +E E +D+ G N E + +G D+ D
Sbjct: 99 PNFLGYYQPRKMKMEEFSEEEDDDVGFLNGSESELGEESEGLIDELD------------- 145
Query: 180 DWDSDEWEAKFLGEDEDD-LDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREA 238
WDSD+ E + LGED+++ L+LDGFTPAGVGYGNITEE +ER KKKK+SKAE+K+ A+EA
Sbjct: 146 -WDSDDLEDELLGEDDNEKLELDGFTPAGVGYGNITEEYLERVKKKKVSKAEKKRMAKEA 204
Query: 239 QKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVV 298
KEK E TVCARCHSLRNYGQVKN+ ENLIPDFDFDR+I+TRLM PSG+ +A VVVMVV
Sbjct: 205 DKEKEEATVCARCHSLRNYGQVKNQTVENLIPDFDFDRLISTRLMNPSGSGSATVVVMVV 264
Query: 299 DCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWV 358
DCVDFDG FP+ A KSLF+ LE +D++K SKKLPKLVLV TKVDLLPSQVSP RLDRWV
Sbjct: 265 DCVDFDGSFPRTAVKSLFQALERIQDNSKRSKKLPKLVLVATKVDLLPSQVSPARLDRWV 324
Query: 359 RHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF 418
R+RA++GGAPKLNGVY+VS++KDLGVRNLL+F+K+LAGPRGNVWVIGAQNAGKSTLIN F
Sbjct: 325 RNRARSGGAPKLNGVYMVSSKKDLGVRNLLSFVKDLAGPRGNVWVIGAQNAGKSTLINAF 384
Query: 419 AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMV 478
AKK+G KV+KLTEAPIPGTTLGILRI G+LPAK K++DTPGLLHP+LMSMRLNRDEQKMV
Sbjct: 385 AKKQGAKVTKLTEAPIPGTTLGILRIAGVLPAKTKMFDTPGLLHPYLMSMRLNRDEQKMV 444
Query: 479 EIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEI 538
EIRKEL+PRTYR+K QA+H+GGL RLDL +ASVETIY TVWAS NVSLH+GKIENADE+
Sbjct: 445 EIRKELRPRTYRIKARQAIHIGGLTRLDLVEASVETIYATVWASLNVSLHMGKIENADEV 504
Query: 539 WKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEAS 598
W+NHVGIRLQPP G DRA+ELGTW++R++KVSGTSWDVN IDIA AGLGWFSL LKGEA+
Sbjct: 505 WRNHVGIRLQPPTGNDRAAELGTWQEREVKVSGTSWDVNTIDIAIAGLGWFSLCLKGEAT 564
Query: 599 LTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRRKKLEETE 656
LW + G+E+TLREPLVLDRAP LE+PGFWLPKAISDA+G+++KLEA+RRK+ E E
Sbjct: 565 TKLWVFHGVEVTLREPLVLDRAPSLEKPGFWLPKAISDAIGNQTKLEAQRRKQQLEDE 622
>gi|334186050|ref|NP_191277.4| GTP binding protein [Arabidopsis thaliana]
gi|17064928|gb|AAL32618.1| putative protein [Arabidopsis thaliana]
gi|28059086|gb|AAO29986.1| putative protein [Arabidopsis thaliana]
gi|332646103|gb|AEE79624.1| GTP binding protein [Arabidopsis thaliana]
Length = 660
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/689 (61%), Positives = 533/689 (77%), Gaps = 54/689 (7%)
Query: 1 MAVLLSTTITTTLNLNVASKPEIPETKVDFLAGNF--TSPLHFPSL-FNTCLLPYLRNKK 57
M VL+S+T+T NV KP++ + GNF + +H P + F + L + K
Sbjct: 1 MVVLISSTVTIC---NV--KPKLED-------GNFRVSRLIHRPEVPFFSGLSNEKKKKC 48
Query: 58 RLSLISLAVKNRSNSEATVNSYGKINKPRKGSGNTLILSEGRDEDEHYGPV-CPGCGIFM 116
+S++ LAVK ++ + G I P+K LI+SEGRDEDE YG + CPGCGIFM
Sbjct: 49 AVSVMCLAVKKEQVVQSVESVNGTIF-PKKS--KNLIMSEGRDEDEDYGKIICPGCGIFM 105
Query: 117 QDKDPNLPGYYKQKKDIERNEEFLEDEEGIEND-IEGFEEDIVDG--------------- 160
QD DP+LPGYY+++K I N LE +E +END + GFE D
Sbjct: 106 QDNDPDLPGYYQKRKVIANN---LEGDEHVENDELAGFEMVDDDADEEEEGEDDEMDDEI 162
Query: 161 -NFDQSDGKESDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVE 219
N + ES+SG +W+SDEWE K ++ +D++LDGF PAGVGYGN+TEE
Sbjct: 163 KNAIEGSNSESESGF-----EWESDEWEEK---KEVNDVELDGFAPAGVGYGNVTEE--- 211
Query: 220 RSKKKKLSKAERKKKAREAQKEKG--EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRV 277
+ KKK++SK ERKK ARE K+ +VTVCARCHSLRNYGQVKN+ AENL+PDFDFDR+
Sbjct: 212 KEKKKRVSKTERKKIAREEAKKDNYDDVTVCARCHSLRNYGQVKNQAAENLLPDFDFDRL 271
Query: 278 IATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVL 337
I+TRL+KP N++ VVVMVVDCVDFDG FPKRAAKSLF+ L++A++D K SK LPKLVL
Sbjct: 272 ISTRLIKPMSNSSTTVVVMVVDCVDFDGSFPKRAAKSLFQVLQKAENDPKGSKNLPKLVL 331
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
V TKVDLLP+Q+SP RLDRWVRHRAKAGGAPKL+GVY+VSARKD+GV+NLLA+IKELAGP
Sbjct: 332 VATKVDLLPTQISPARLDRWVRHRAKAGGAPKLSGVYMVSARKDIGVKNLLAYIKELAGP 391
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
RGNVWVIGAQNAGKSTLIN +KK+G KV++LTEAP+PGTTLGIL+IGGIL AKAK+YDT
Sbjct: 392 RGNVWVIGAQNAGKSTLINALSKKDGAKVTRLTEAPVPGTTLGILKIGGILSAKAKMYDT 451
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PGLLHP+LMS+RLN +E+KMVEIRKE+QPR+YRVK GQ+VH+GGL+RLDL ASVETIY+
Sbjct: 452 PGLLHPYLMSLRLNSEERKMVEIRKEVQPRSYRVKAGQSVHIGGLVRLDLVSASVETIYI 511
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
T+WAS +VSLHLGK ENA+EI+K H G+RLQPPIG++RASELGTW++++++VSG SWDV
Sbjct: 512 TIWASHSVSLHLGKTENAEEIFKGHSGLRLQPPIGENRASELGTWEEKEIQVSGNSWDVK 571
Query: 578 GIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDA 637
IDI+ AGLGW SLGLKG A+L LWTY GI++TLREPLV+DRAP+LERPGFWLPKAI++
Sbjct: 572 SIDISVAGLGWLSLGLKGAATLALWTYQGIDVTLREPLVIDRAPYLERPGFWLPKAITEV 631
Query: 638 LGSKSK--LEAKRRKKLEETEDFLSEVSA 664
LG+ S ++A+RRKK +++ DFLS+ A
Sbjct: 632 LGTHSSKLVDARRRKKQQDSTDFLSDSVA 660
>gi|87241448|gb|ABD33306.1| Protein C4orf14 homolog, related [Medicago truncatula]
Length = 616
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/657 (65%), Positives = 507/657 (77%), Gaps = 58/657 (8%)
Query: 1 MAVLLSTTITTTLNLNVASKPEIPETKVDFLAGNFTSPLHFPSLF--NTCLLPYLRNKKR 58
MA+L ST + N+ +K+ L N TS H F NT R K
Sbjct: 1 MAILFSTIALPSTNVT---------SKLSIL--NNTSHSHALRHFSGNTTK----RFHKA 45
Query: 59 LSLISLAVKNRSNSEATVNSYGKINKPRKGSGNTLILSEGRDEDEHYGPVCPGCGIFMQD 118
S I+ AVKN T PR+ S N L LSEGRDEDE GP+CPGCGIFMQD
Sbjct: 46 SSFIAFAVKNNPTIRKTT--------PRRDSRNPL-LSEGRDEDEALGPICPGCGIFMQD 96
Query: 119 KDPNLPGYYKQKKDIERNEEFLEDEEGIENDIEGFEEDIVDGNFDQSDGKESDSGDGDVF 178
DPNLPG+Y+QK E IE F E+ + + ++ DG+E D+G D
Sbjct: 97 NDPNLPGFYQQK----------------EVKIETFSEEDYELDDEEDDGEEEDNGSIDDE 140
Query: 179 DDWDSDEWEAKFLGEDEDD-LDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKARE 237
DWDS+E EA LGE+ DD +DLDGFT AGVGYGN+TEE++ER+KKKK+SKAE+K+ ARE
Sbjct: 141 SDWDSEELEAMLLGEENDDKVDLDGFTHAGVGYGNVTEEVLERAKKKKVSKAEKKRMARE 200
Query: 238 AQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMV 297
A+K K EVTVCARCHSLRNYGQVKN +AENLIPDFDFDR+I TRLM P+G+ ++ VVVMV
Sbjct: 201 AEKVKEEVTVCARCHSLRNYGQVKNYMAENLIPDFDFDRLITTRLMNPAGSGSSTVVVMV 260
Query: 298 VDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
VDCVDFDG FP+ A KSLFK LE +++ K KKLPKLVLV TKVDLLPSQVSPTRLDRW
Sbjct: 261 VDCVDFDGSFPRTAVKSLFKALEGMQENTKKGKKLPKLVLVATKVDLLPSQVSPTRLDRW 320
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
VRHRA AGGAPKL+ VYLVS+RKDLGVRN+L+F+K+LAGPRGNVWVIGAQNAGKSTLIN
Sbjct: 321 VRHRASAGGAPKLSAVYLVSSRKDLGVRNVLSFVKDLAGPRGNVWVIGAQNAGKSTLINA 380
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
FAKKEG KV+KLTEAP+PGTTLGILRI GIL AKAK++DTPGLLHP+L+SMRLNR+EQKM
Sbjct: 381 FAKKEGAKVTKLTEAPVPGTTLGILRIAGILSAKAKMFDTPGLLHPYLLSMRLNREEQKM 440
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
GQA+HVGGL RLDL +ASV+T+YVTVWASPNVSLH+GKIENA+E
Sbjct: 441 ---------------AGQAIHVGGLARLDLIEASVQTMYVTVWASPNVSLHMGKIENANE 485
Query: 538 IWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEA 597
IW NHVG+RLQPPIG DRA+ELGTWK+R++KVSG+SWDVN +D++ AGLGWFSLG++GEA
Sbjct: 486 IWNNHVGVRLQPPIGNDRAAELGTWKEREVKVSGSSWDVNCMDVSIAGLGWFSLGIQGEA 545
Query: 598 SLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRRKKLEE 654
++ LWT DGIEITLREPLVLDRAP LE+PGFWLPKAIS+ +G+++KLEA+RRKKLE+
Sbjct: 546 TMKLWTNDGIEITLREPLVLDRAPSLEKPGFWLPKAISEVIGNQTKLEAQRRKKLED 602
>gi|297820508|ref|XP_002878137.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297323975|gb|EFH54396.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/688 (59%), Positives = 513/688 (74%), Gaps = 74/688 (10%)
Query: 1 MAVLLSTTITTTLNLNVASKPE---------IPETKVDFLAGNFTSPLHFPSLFNTCLLP 51
M VL+S+T+T V K E IP +V F +G L
Sbjct: 1 MVVLISSTVTIC---RVKPKLEDGSFRVSRLIPRPEVPFFSG----------------LS 41
Query: 52 YLRNKKRLSLI--SLAVKNRSNSEATVNSYGKINKPRKGSGNTLILSEGRDEDEHYGPV- 108
+ KK+ +++ LAVK ++ + G I P+K LI+SEG+DEDE YG +
Sbjct: 42 DEKKKKKCAVLVTCLAVKKEQVVQSVESVKGTIF-PKKS--KNLIMSEGKDEDEEYGKII 98
Query: 109 CPGCGIFMQDKDPNLPGYYKQKKDIERNEEFLEDEEGIENDIEGFEEDIVDGNFDQS--- 165
CPGCGIFMQD DP+LPG+Y+++K I +N E E+EE E++++GFE D ++
Sbjct: 99 CPGCGIFMQDNDPDLPGFYQKRKVIAKNLEVDEEEE--EDELDGFEMVDDDELEEEEEDD 156
Query: 166 -------DGKESDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELV 218
+ E + + + DW+SDEWE K E+ +D++LD
Sbjct: 157 EMDDEIKNAMEGSNSESESQFDWESDEWEDK---EEVNDVELD----------------- 196
Query: 219 ERSKKKKLSKAERKKKAREAQKEKG--EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDR 276
KKK++SK ERKK ARE K+ +VTVCARCHSLRNYGQVKN+ AENL+PDFDFDR
Sbjct: 197 --EKKKRVSKTERKKIAREEAKKDNYDDVTVCARCHSLRNYGQVKNQAAENLLPDFDFDR 254
Query: 277 VIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV 336
+I+TRL+KP N++ VVVMVVDCVDFDG FPKRAAKSLF+ L++A++D K SK LPKLV
Sbjct: 255 LISTRLIKPMSNSSTTVVVMVVDCVDFDGSFPKRAAKSLFQVLQKAENDPKGSKNLPKLV 314
Query: 337 LVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAG 396
LV TKVDLLP+Q+SP RLDRWVRHRAKAGGAPKL+GVY+VSARKDLGV+NLLA+IKELAG
Sbjct: 315 LVATKVDLLPTQISPARLDRWVRHRAKAGGAPKLSGVYMVSARKDLGVKNLLAYIKELAG 374
Query: 397 PRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
PRGNVWVIGAQNAGKSTLIN +KK+G KV++LTEAP+PGTTLGILRIGGIL AKAK+YD
Sbjct: 375 PRGNVWVIGAQNAGKSTLINALSKKDGAKVTRLTEAPVPGTTLGILRIGGILSAKAKMYD 434
Query: 457 TPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIY 516
TPGLLHP+LMS+RLN +E+KMVEIRKELQPR+YR GQ+VH+GGL+RLDL ASVETIY
Sbjct: 435 TPGLLHPYLMSLRLNPEERKMVEIRKELQPRSYR--AGQSVHIGGLVRLDLVSASVETIY 492
Query: 517 VTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDV 576
+T+WAS +VSLHLGK ENA+EI+K H G+RLQPPIG++RASELGTW++++++VSG SWDV
Sbjct: 493 ITIWASHSVSLHLGKTENAEEIFKGHSGLRLQPPIGENRASELGTWEEKEIQVSGNSWDV 552
Query: 577 NGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISD 636
IDI+ AGLGW SLGLKG A+L LWTY GI++TLREPLV+DRAPFLERPGFWLPKAI++
Sbjct: 553 KSIDISVAGLGWLSLGLKGAATLALWTYQGIDVTLREPLVIDRAPFLERPGFWLPKAITE 612
Query: 637 ALGS-KSKL-EAKRRKKLEETEDFLSEV 662
LG+ SKL +A+RRKK +++ DFLS++
Sbjct: 613 VLGTHSSKLDDARRRKKQQDSTDFLSDI 640
>gi|6735297|emb|CAB68124.1| putative protein [Arabidopsis thaliana]
Length = 629
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/689 (58%), Positives = 503/689 (73%), Gaps = 85/689 (12%)
Query: 1 MAVLLSTTITTTLNLNVASKPEIPETKVDFLAGNF--TSPLHFPSL-FNTCLLPYLRNKK 57
M VL+S+T+T NV KP++ + GNF + +H P + F + L + K
Sbjct: 1 MVVLISSTVTIC---NV--KPKLED-------GNFRVSRLIHRPEVPFFSGLSNEKKKKC 48
Query: 58 RLSLISLAVKNRSNSEATVNSYGKINKPRKGSGNTLILSEGRDEDEHYGPV-CPGCGIFM 116
+S++ LAVK ++ + G I P+K LI+SEGRDEDE YG + CPGCGIFM
Sbjct: 49 AVSVMCLAVKKEQVVQSVESVNGTIF-PKKS--KNLIMSEGRDEDEDYGKIICPGCGIFM 105
Query: 117 QDKDPNLPGYYKQKKDIERNEEFLEDEEGIEND-IEGFEEDIVDG--------------- 160
QD DP+LPGYY+++K I N LE +E +END + GFE D
Sbjct: 106 QDNDPDLPGYYQKRKVIANN---LEGDEHVENDELAGFEMVDDDADEEEEGEDDEMDDEI 162
Query: 161 -NFDQSDGKESDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVE 219
N + ES+SG +W+SDEWE K ++ +D++LD
Sbjct: 163 KNAIEGSNSESESGF-----EWESDEWEEK---KEVNDVELD------------------ 196
Query: 220 RSKKKKLSKAERKKKAREAQKEKG--EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRV 277
KKK++SK ERKK ARE K+ +VTVCARCHSLRNYGQVKN+ AENL+PDFDFDR+
Sbjct: 197 -EKKKRVSKTERKKIAREEAKKDNYDDVTVCARCHSLRNYGQVKNQAAENLLPDFDFDRL 255
Query: 278 IATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVL 337
I+TRL+KP N++ VVVMVVDCVDFDG FPKRAAKSLF+ L++A++D K SK LPKLVL
Sbjct: 256 ISTRLIKPMSNSSTTVVVMVVDCVDFDGSFPKRAAKSLFQVLQKAENDPKGSKNLPKLVL 315
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
V TKVDLLP+Q+SP RLDRWVRHRAKAGGAPKL+GVY+VSARKD+GV+NLLA+IKELAGP
Sbjct: 316 VATKVDLLPTQISPARLDRWVRHRAKAGGAPKLSGVYMVSARKDIGVKNLLAYIKELAGP 375
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
RGNVWVIGAQNAGKSTLIN +KK+G KV++LTEAP+PGTTLGIL+IGGIL AKAK+YDT
Sbjct: 376 RGNVWVIGAQNAGKSTLINALSKKDGAKVTRLTEAPVPGTTLGILKIGGILSAKAKMYDT 435
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PGLLHP+LMS+RLN +E+KM GQ+VH+GGL+RLDL ASVETIY+
Sbjct: 436 PGLLHPYLMSLRLNSEERKM---------------AGQSVHIGGLVRLDLVSASVETIYI 480
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
T+WAS +VSLHLGK ENA+EI+K H G+RLQPPIG++RASELGTW++++++VSG SWDV
Sbjct: 481 TIWASHSVSLHLGKTENAEEIFKGHSGLRLQPPIGENRASELGTWEEKEIQVSGNSWDVK 540
Query: 578 GIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDA 637
IDI+ AGLGW SLGLKG A+L LWTY GI++TLREPLV+DRAP+LERPGFWLPKAI++
Sbjct: 541 SIDISVAGLGWLSLGLKGAATLALWTYQGIDVTLREPLVIDRAPYLERPGFWLPKAITEV 600
Query: 638 LGSKSK--LEAKRRKKLEETEDFLSEVSA 664
LG+ S ++A+RRKK +++ DFLS+ A
Sbjct: 601 LGTHSSKLVDARRRKKQQDSTDFLSDSVA 629
>gi|115468206|ref|NP_001057702.1| Os06g0498900 [Oryza sativa Japonica Group]
gi|52076484|dbj|BAD45363.1| putative GTPase [Oryza sativa Japonica Group]
gi|113595742|dbj|BAF19616.1| Os06g0498900 [Oryza sativa Japonica Group]
gi|125555454|gb|EAZ01060.1| hypothetical protein OsI_23088 [Oryza sativa Indica Group]
gi|215686793|dbj|BAG89643.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635637|gb|EEE65769.1| hypothetical protein OsJ_21450 [Oryza sativa Japonica Group]
Length = 681
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/612 (58%), Positives = 448/612 (73%), Gaps = 51/612 (8%)
Query: 94 ILSEGRD-EDEHYG-PVCPGCGIFMQDKDPNLPGYYKQKKDIERNEEFLEDEEGIENDIE 151
++SEGRD ED G PVCPGCG+FMQD DPNLPG++K + +E + + + +
Sbjct: 72 VISEGRDDEDAAVGRPVCPGCGVFMQDADPNLPGFFKNPSRLSDDEMGEDGSPPLAAEPD 131
Query: 152 GFEEDIVDGNFDQSDGKESDSGDGDVFDDWDSD--------------------EWEAKFL 191
GF D D+ DG S+S D DSD + +AK
Sbjct: 132 GFLGD------DEEDGAPSESDLAAELDGLDSDLDEFLEEEDENGEDGAEMKADIDAKID 185
Query: 192 GEDED----------------DLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKA 235
G D +LDGFTP GVGYG ITEE +ER KK+KLSK+ERK++A
Sbjct: 186 GFSSDWDSDWDEEMEDEEEKWRKELDGFTPPGVGYGKITEETLERWKKEKLSKSERKRRA 245
Query: 236 REAQKEKGE---VTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
REA+K + E VCARCHSLRNYG VKN+ AENLIPDFDFDR I++RLMK S A
Sbjct: 246 REAKKAEAEEDAAVVCARCHSLRNYGHVKNDKAENLIPDFDFDRFISSRLMKRS--AGTP 303
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
V+VMV DC DFDG FPKRAAKSLFK LE + +KLS+ P+LVLVGTKVDLLP Q
Sbjct: 304 VIVMVADCADFDGSFPKRAAKSLFKALE-GRGTSKLSET-PRLVLVGTKVDLLPWQQMGV 361
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
RL++WVR RAKA GAPKL+ V+L+S KDL VRNL++++KELAGPR NVWVIGAQNAGKS
Sbjct: 362 RLEKWVRGRAKAFGAPKLDAVFLISVHKDLSVRNLISYVKELAGPRSNVWVIGAQNAGKS 421
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN FAKK+GVK+++LTEA +PGTTLGILRI G+LPAKAK+YDTPGLLHP++MSMRLN
Sbjct: 422 TLINAFAKKQGVKITRLTEAAVPGTTLGILRITGVLPAKAKMYDTPGLLHPYIMSMRLNS 481
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+E+KMVEIRKEL+PR +RVK GQ+VH+GGL RLD+ +ASV+TIY+TVWASP+VSLHLGK
Sbjct: 482 EERKMVEIRKELRPRCFRVKAGQSVHIGGLTRLDVLKASVQTIYITVWASPSVSLHLGKT 541
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
ENA+E+ H GIRLQPPI +R +ELG W +R++ VSG SWDVN +DIA +GLGW+SLG
Sbjct: 542 ENAEELRDKHFGIRLQPPIRPERVAELGHWTERQIDVSGVSWDVNSMDIAISGLGWYSLG 601
Query: 593 LKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRRKKL 652
LKG A++ +WT+DGI++T R+ ++L RA FLERPGFWLP AI++A+G +++ + +RRKK
Sbjct: 602 LKGNATVAVWTFDGIDVTRRDAMILHRAQFLERPGFWLPIAIANAIGEETRKKNERRKKA 661
Query: 653 EETEDFLSEVSA 664
E+ +D L E SA
Sbjct: 662 EQRDDLLLEESA 673
>gi|226499582|ref|NP_001147795.1| IMP dehydrogenase/GMP reductase [Zea mays]
gi|195613790|gb|ACG28725.1| IMP dehydrogenase/GMP reductase [Zea mays]
gi|223944539|gb|ACN26353.1| unknown [Zea mays]
gi|413924785|gb|AFW64717.1| IMP dehydrogenase/GMP reductase [Zea mays]
Length = 668
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/623 (57%), Positives = 461/623 (73%), Gaps = 50/623 (8%)
Query: 66 VKNRSNSEATVNSYGKINKPRKGSGNTLILSEGRD-EDEHYG-PVCPGCGIFMQDKDPNL 123
++ RS S +TV + R+ S ++SEGRD ED G PVCPGCG+FMQD+DPNL
Sbjct: 41 LQRRSLSASTVPAG------RRSSPPAPVISEGRDDEDAAVGRPVCPGCGVFMQDEDPNL 94
Query: 124 PGYYKQKKDIERNE--------------EFLEDE-----------------EGIENDIEG 152
PG++K ++E FLE+E EG+++DI+
Sbjct: 95 PGFFKNPSRSSQDETGGSGEVLLAADTDAFLEEEDDNDDRRVADDASDAELEGLDSDIDE 154
Query: 153 FEEDIVDGNFDQSDGKESDSG-DGDVF-DDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGY 210
F E+ G D+ DG S D D F DWDSD E + +++ +LDGFT GVGY
Sbjct: 155 FLEEFDKG--DEDDGLPVKSATDTDAFASDWDSDWEEMEEDEDEKWRKELDGFTLPGVGY 212
Query: 211 GNITEELVERSKKKKLSKAERKKKAREAQKEKGE---VTVCARCHSLRNYGQVKNEVAEN 267
GNITEE +ER KK+KLSK++RK++AREA++ + E VC+RCHSLRNYG VKN+ AEN
Sbjct: 213 GNITEETIERMKKEKLSKSQRKRQAREAKRAEAEEDSALVCSRCHSLRNYGLVKNDKAEN 272
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
LIPDFDFDR I++RLMK S A V+VMVVDC DFDG FPKRAAKSLF+ LE + ++K
Sbjct: 273 LIPDFDFDRFISSRLMKRS--AGTPVIVMVVDCADFDGSFPKRAAKSLFEALE-GRRNSK 329
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNL 387
S+ P+LVLVGTKVDLLP Q RLD+WVR RAKA GAPKL+GV+L+S +DL VRNL
Sbjct: 330 ASET-PRLVLVGTKVDLLPWQQMGVRLDKWVRGRAKALGAPKLDGVFLISVHRDLAVRNL 388
Query: 388 LAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGI 447
+ +IKE AGPR NVWVIGAQNAGKSTLIN FAKK+GVK+++LTEA +PGTTLGILR+ G+
Sbjct: 389 ITYIKESAGPRSNVWVIGAQNAGKSTLINAFAKKQGVKITRLTEAAVPGTTLGILRVTGV 448
Query: 448 LPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDL 507
LPAKAK+YDTPGLLHP++M+MRLN +E+KMVEIRKE++PR++RVK GQ+VH+GGL RLD+
Sbjct: 449 LPAKAKMYDTPGLLHPYIMAMRLNNEERKMVEIRKEMRPRSFRVKVGQSVHIGGLARLDV 508
Query: 508 DQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKL 567
++SV+TIY+TVWAS NV LHLGK EN+DE+ H GIRLQPPIG +R ELG W R +
Sbjct: 509 LKSSVQTIYITVWASSNVPLHLGKTENSDELRDKHFGIRLQPPIGPERVDELGHWTGRSI 568
Query: 568 KVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPG 627
+VSG SWDVN +DIA +GLGW+SLGLKG A+++LWT++GI +T R+ ++L RA FLERPG
Sbjct: 569 EVSGASWDVNSMDIAVSGLGWYSLGLKGTATVSLWTFEGIGVTERDAMILHRAQFLERPG 628
Query: 628 FWLPKAISDALGSKSKLEAKRRK 650
FWLP AI++A+G +++ + ++RK
Sbjct: 629 FWLPIAIANAIGEETRKKNEKRK 651
>gi|242067315|ref|XP_002448934.1| hypothetical protein SORBIDRAFT_05g001920 [Sorghum bicolor]
gi|241934777|gb|EES07922.1| hypothetical protein SORBIDRAFT_05g001920 [Sorghum bicolor]
Length = 666
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/592 (59%), Positives = 451/592 (76%), Gaps = 39/592 (6%)
Query: 94 ILSEGRDEDEHY--GPVCPGCGIFMQDKDPNLPGYYKQKKDIERNE-------------- 137
++SEGRD++E PVCPGCG+FMQD DPNLPG++K ++E
Sbjct: 62 VISEGRDDEEAAVGRPVCPGCGVFMQDADPNLPGFFKNPSRSSQDETGGGGEVLLAAADT 121
Query: 138 -EFLEDE--------------EGIENDIEGFEEDIVDGNFDQSDGKESDSGDGDVF-DDW 181
FLEDE EG+++DI+ F ED DG+ + + D D F DW
Sbjct: 122 DAFLEDEKEGVVAEDALDAELEGLDSDIDEFLEDFEDGDEEDDGSPVKGATDIDAFASDW 181
Query: 182 DSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKE 241
DSD E + +++ +LDGFTP GVGYGNITEE ++R KK+KLSK+ERK++AREA++
Sbjct: 182 DSDWEEMEEDEDEKWRKELDGFTPPGVGYGNITEETIQRLKKEKLSKSERKRQAREAKRA 241
Query: 242 KGE---VTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVV 298
+ E VC+RCHSLRNYG VKN+ AENLIPDFDFDR I++R+MK S A V+VMVV
Sbjct: 242 EAEEDSALVCSRCHSLRNYGLVKNDKAENLIPDFDFDRFISSRVMKRS--AGTPVIVMVV 299
Query: 299 DCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWV 358
DC DFDG FPKRAAKSLF+ LE + ++K+S+ P+LVLVGTKVDLLP Q RLDRWV
Sbjct: 300 DCADFDGSFPKRAAKSLFEALE-GRRNSKVSET-PRLVLVGTKVDLLPWQQMGVRLDRWV 357
Query: 359 RHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF 418
R RAKA GAPKL+ V+L+S +DL VRNL+++IKE AGPR NVWVIGAQNAGKSTLIN F
Sbjct: 358 RGRAKAFGAPKLDAVFLISVHRDLAVRNLISYIKESAGPRSNVWVIGAQNAGKSTLINAF 417
Query: 419 AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMV 478
AKK+GVK+++LTEA +PGTTLGILR+ G+LPAKAK+YDTPGLLHP++M+MRLN +E+KMV
Sbjct: 418 AKKQGVKITRLTEAAVPGTTLGILRVTGVLPAKAKMYDTPGLLHPYIMAMRLNNEERKMV 477
Query: 479 EIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEI 538
EIRKEL+PR++RVK GQ+VH+GGL RLD+ ++S +TIYVTVWAS NV LHLGK ENADE+
Sbjct: 478 EIRKELRPRSFRVKVGQSVHIGGLTRLDVLKSSAQTIYVTVWASSNVPLHLGKTENADEL 537
Query: 539 WKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEAS 598
+ H GIRLQPPIG +R +ELG W +R ++VSG SWDVN +DIA +GLGW+SLGLKG A+
Sbjct: 538 REKHFGIRLQPPIGPERVNELGHWTERHIEVSGASWDVNSMDIAVSGLGWYSLGLKGTAT 597
Query: 599 LTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRRK 650
++LWT++GI +T R+ ++L RA FLERPGFWLP AI++ALG +++ + ++RK
Sbjct: 598 VSLWTFEGIGVTERDAMILHRAQFLERPGFWLPIAIANALGEETRKKNEKRK 649
>gi|357161135|ref|XP_003578990.1| PREDICTED: uncharacterized protein LOC100844826 [Brachypodium
distachyon]
Length = 668
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/658 (55%), Positives = 469/658 (71%), Gaps = 47/658 (7%)
Query: 38 PLHFPSLFNTCLLPYLRNKKRLSLISLAVKNRSNSEATVNSYGKINKPRKGSGNTLILSE 97
P+ F L +T LR LS LA+ N A V++ + P + ++SE
Sbjct: 21 PVRF--LLHTTPPLRLRLHPFLSPPPLALPQSLNLSAAVSTTKRARPP---TNPGQVISE 75
Query: 98 GRDEDEHYGPVCPGCGIFMQDKDPNLPGYYKQKKDIERNEE---------------FLE- 141
GRD D VCPGCG+FMQD DP+LPG++ R+ + FLE
Sbjct: 76 GRDVDARRA-VCPGCGVFMQDDDPDLPGFFTSPSSPRRSPQDEMGEEEEEAGSPDAFLEE 134
Query: 142 DEEGIENDIEG----FEEDIVD---------GNFDQSDGKESDSGDGDVFD--DWDSDEW 186
D+EG+ +EG E D+ G+F + +G + +SG DWDSD
Sbjct: 135 DDEGL---LEGGDLPSESDLAAELHGLGTGFGDFVEEEGSDGESGSPPAMAGIDWDSDWD 191
Query: 187 EAKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGE-- 244
E ED+ +LDGFTP GVGYGNITEE +ER KK+KLSK+ERK++AREA++ + E
Sbjct: 192 EEMEDEEDKWSRELDGFTPPGVGYGNITEETLERMKKEKLSKSERKQRAREAKRAEAEED 251
Query: 245 -VTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
VCARCHSLRNYG VKN+ A+NLIPDFDFDR I++RLMK S A V+VMVVDC DF
Sbjct: 252 SAVVCARCHSLRNYGHVKNDKADNLIPDFDFDRFISSRLMKRS--AGTPVIVMVVDCADF 309
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
DG FPKRAAKSLFK LE + +KLS+ P+LVLVGTKVDLLP + RL++WVR RAK
Sbjct: 310 DGSFPKRAAKSLFKALE-GRGTSKLSET-PRLVLVGTKVDLLPWEQMGVRLEKWVRGRAK 367
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
A GAPKL+ V+L+S KDL VRNL++++KELAGPR NVWVIGAQNAGKSTLIN FAKK+G
Sbjct: 368 AFGAPKLDAVFLISVHKDLSVRNLISYVKELAGPRSNVWVIGAQNAGKSTLINAFAKKQG 427
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
VK+++LTEA +PGTTLGILR+ G+LPAKAK+YDTPGLLHP+++SMRLN +E+KMVEIRKE
Sbjct: 428 VKITRLTEAAVPGTTLGILRMTGVLPAKAKMYDTPGLLHPYIISMRLNSEERKMVEIRKE 487
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+RVK GQ+VH+GGL RLD+ +ASV+TIYVTVW S N+SLHLGK ENA+E+ H+
Sbjct: 488 LRPRTFRVKAGQSVHIGGLTRLDVLEASVQTIYVTVWVSCNISLHLGKTENAEELRSKHI 547
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
GIRLQPP+ +R +ELG W +R++ VSG SWDVN DIA +GLGW+SLGLKG A++ ++T
Sbjct: 548 GIRLQPPVCAERVAELGQWTERRIDVSGISWDVNSTDIAVSGLGWYSLGLKGNATVAVFT 607
Query: 604 YDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRRKKLEETEDFLSE 661
+DGI++T R+ ++L RA FLERPGFWLP AI++A+G +++ + + K + +D L E
Sbjct: 608 FDGIDVTRRDAMILHRAKFLERPGFWLPIAIANAIGEETRKKNESMKAEQSDDDLLEE 665
>gi|326495204|dbj|BAJ85698.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 351/600 (58%), Positives = 441/600 (73%), Gaps = 48/600 (8%)
Query: 94 ILSEGRDEDEHYGPVCPGCGIFMQDKDPNLPGYYKQKKDIERNEEFLEDEEGIENDIEGF 153
++SEGRDED VCPGCG+FMQD DP+LPG++ +E EEG + +EGF
Sbjct: 72 VISEGRDEDARRA-VCPGCGVFMQDADPDLPGFFTSPSRRPPEDEL--GEEGSVDSLEGF 128
Query: 154 ----EEDIVDGNFDQSD-GKESDSGDG--------------------------DVFDDWD 182
EED DG +SD E DS D D WD
Sbjct: 129 VGDDEED--DGLPWESDLAAELDSLDTGFLESLEEEEDEEDEEDGGGEAEAGMDAGSGWD 186
Query: 183 SDEWEAKFLGEDED-DLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKE 241
SD E E+E +LDGFTP GVGYG+ITEE +ER +K+KLSKAERK++AREA++
Sbjct: 187 SDWDEGMEEDEEEKWSKELDGFTPPGVGYGSITEETLERMRKEKLSKAERKRRAREARQA 246
Query: 242 K----GEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMV 297
+ VCARCHSLRNYG VKN+ A+NLIPDFDFDR I++RLMK S A V+VMV
Sbjct: 247 EAREDSSAVVCARCHSLRNYGHVKNDRADNLIPDFDFDRFISSRLMKRS--AGTPVIVMV 304
Query: 298 VDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
VDC DFDG FPKRAAKSLF+ LE + +KLS+ P+LVLVGTKVDLLP + RL++W
Sbjct: 305 VDCADFDGSFPKRAAKSLFRALE-GRGSSKLSET-PRLVLVGTKVDLLPWEQMGVRLEKW 362
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
VR RAKA GAPKL+ VYLVS KDL VRNL++++K+LAGPR NVWVIGAQNAGKSTLIN
Sbjct: 363 VRGRAKAFGAPKLDAVYLVSVHKDLSVRNLISYVKDLAGPRSNVWVIGAQNAGKSTLING 422
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
FAKK+GV +++LTEA +PGTTLGILR+ G+LPAKAK+YDTPGLLHP++MSMRLN +E+KM
Sbjct: 423 FAKKQGVNITRLTEAAVPGTTLGILRMTGVLPAKAKMYDTPGLLHPYIMSMRLNTEERKM 482
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
VEIRKEL+PRT+RVK GQ+VH+GGL RLD+ +ASV+TIYVTVWAS N+SLHLGK ENA+E
Sbjct: 483 VEIRKELRPRTFRVKAGQSVHIGGLTRLDVLEASVQTIYVTVWASANISLHLGKTENAEE 542
Query: 538 IWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEA 597
+ HVGIRLQPP+ +RA+ELG W +R++ VSG SWDV+ DIA +GLGW+SLGLKG+A
Sbjct: 543 LRDKHVGIRLQPPVVPERAAELGQWTERRIDVSGLSWDVSSTDIAVSGLGWYSLGLKGKA 602
Query: 598 SLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRRKKLEETED 657
++ + T+DGI++T R+ ++L RA FLERPGF LP AI++A+G +++ K+ KL ++
Sbjct: 603 TVAVHTFDGIDVTQRDAMILHRAKFLERPGFLLPIAIANAIGEETR---KKNAKLNAQQE 659
>gi|449503485|ref|XP_004162026.1| PREDICTED: uncharacterized protein YqeH-like [Cucumis sativus]
Length = 568
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/507 (46%), Positives = 336/507 (66%), Gaps = 13/507 (2%)
Query: 159 DGNFDQSDGKESDSGDGDVFDDWDSDEWEAKFL----GEDEDDLDLDGFTPAGVGYGNIT 214
DGNFD++ + S G DS+ F +D + L P +
Sbjct: 62 DGNFDETTSRFSLVCPGCGVHMQDSNPKHPGFFIKPSKKDSNYRLLTHLVPV-----DDE 116
Query: 215 EELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDF 274
E E K+ + + E++K + ++ + TVC+RCHSLR+YG+VK+ ENL+PDFDF
Sbjct: 117 SECSEFLKRGLVIEPEKEKTEEDVNEKPQKPTVCSRCHSLRHYGKVKDPSVENLLPDFDF 176
Query: 275 DRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKK--L 332
+ + RL+ +G + VV++VVD DFDG FPK+ A + +E K K +
Sbjct: 177 NHTLGGRLVSTTGTRS--VVLIVVDAADFDGSFPKKVANLVSASIENNSAAWKQGKSGNV 234
Query: 333 PKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIK 392
P++VLV TK DLLPS +SP + + WVR RA+ GG K+ +++VS+ +D G++NL+ +
Sbjct: 235 PRVVLVVTKTDLLPSSLSPEKFEHWVRQRAREGGINKITSLHMVSSIRDWGIKNLVEDVI 294
Query: 393 ELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKA 452
ELAG RGNVW IGAQNAGKSTLIN+ K G K+++LTEAP+PGTTLGI+R+ GI PA+A
Sbjct: 295 ELAGARGNVWAIGAQNAGKSTLINSIGKHVGGKITQLTEAPVPGTTLGIIRVEGIFPAQA 354
Query: 453 KLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASV 512
KL+DTPGLL+PH ++ RL R+EQK+V I KEL+PRTYR+K G +HV GLMRLD+++ ++
Sbjct: 355 KLFDTPGLLNPHQITTRLTREEQKLVHISKELKPRTYRIKVGHTIHVAGLMRLDVEETNL 414
Query: 513 ETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGT 572
+TIYVTVWASP + LH+GK ENA ++ ++H GI+LQPPIG+DR ELG W R+ +V GT
Sbjct: 415 DTIYVTVWASPYLPLHMGKTENATKMQEDHFGIQLQPPIGKDRVEELGKWVRREFRVCGT 474
Query: 573 SWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPK 632
SWD + +D A AGLGWF++GLKGE L++WTY+G++I LR ++ RA F E GF + K
Sbjct: 475 SWDSSCVDAAVAGLGWFAIGLKGEVVLSIWTYEGVDIVLRSSVIPHRANFFEDAGFTVSK 534
Query: 633 AISDALGSKSKLEAKRRKKLEETEDFL 659
+S A + +K + KK T F+
Sbjct: 535 IVSKADQASNKPLGQSEKKKRVTPRFM 561
Score = 42.4 bits (98), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 19/88 (21%)
Query: 89 SGNTLILSEGRDEDE---HYGPVCPGCGIFMQDKDPNLPGYYKQKKDIERN--------- 136
S L LS + DE + VCPGCG+ MQD +P PG++ + + N
Sbjct: 53 SPQALSLSRDGNFDETTSRFSLVCPGCGVHMQDSNPKHPGFFIKPSKKDSNYRLLTHLVP 112
Query: 137 -------EEFLEDEEGIENDIEGFEEDI 157
EFL+ IE + E EED+
Sbjct: 113 VDDESECSEFLKRGLVIEPEKEKTEEDV 140
>gi|449448988|ref|XP_004142247.1| PREDICTED: uncharacterized protein YqeH-like [Cucumis sativus]
Length = 566
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/499 (47%), Positives = 333/499 (66%), Gaps = 13/499 (2%)
Query: 159 DGNFDQSDGKESDSGDGDVFDDWDSDEWEAKFL----GEDEDDLDLDGFTPAGVGYGNIT 214
DGNFD++ + S G DS+ F +D + L P +
Sbjct: 62 DGNFDETTSRFSLVCPGCGVHMQDSNPKHPGFFIKPSKKDSNYRLLTHLVPV-----DDE 116
Query: 215 EELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDF 274
E E K+ + + E++K + ++ + TVC+RCHSLR+YG+VK+ ENL+PDFDF
Sbjct: 117 SECSEFLKRGLVIEPEKEKTEEDVNEKPQKPTVCSRCHSLRHYGKVKDPSVENLLPDFDF 176
Query: 275 DRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKK--L 332
+ + RL+ +G + VV++VVD DFDG FPK+ A + +E K K +
Sbjct: 177 NHTLGGRLVSTTGTRS--VVLIVVDAADFDGSFPKKVANLVSASIENNSAAWKQGKSGNV 234
Query: 333 PKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIK 392
P++VLV TK DLLPS +SP + + WVR RA+ GG K+ +++VS+ +D G++NL+ +
Sbjct: 235 PRVVLVVTKTDLLPSSLSPEKFEHWVRQRAREGGINKITSLHMVSSIRDWGIKNLVEDVI 294
Query: 393 ELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKA 452
ELAG RGNVW IGAQNAGKSTLIN+ K G K+++LTEAP+PGTTLGI+R+ GI PA+A
Sbjct: 295 ELAGARGNVWAIGAQNAGKSTLINSIGKHVGGKITQLTEAPVPGTTLGIIRVEGIFPAQA 354
Query: 453 KLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASV 512
KL+DTPGLL+PH ++ RL R+EQK+V I KEL+PRTYR+K G +HV GLMRLD+++ ++
Sbjct: 355 KLFDTPGLLNPHQITTRLTREEQKLVHISKELKPRTYRIKVGHTIHVAGLMRLDVEETNL 414
Query: 513 ETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGT 572
+TIYVTVWASP + LH+GK ENA ++ ++H GI+LQPPIG+DR ELG W R+ +V GT
Sbjct: 415 DTIYVTVWASPYLPLHMGKTENATKMQEDHFGIQLQPPIGKDRVEELGKWVRREFRVCGT 474
Query: 573 SWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPK 632
SWD + +D A AGLGWF++GLKGE L++WTY+G++I LR ++ RA F E GF + K
Sbjct: 475 SWDSSCVDAAVAGLGWFAIGLKGEVVLSIWTYEGVDIVLRSSVIPHRANFFEDAGFTVSK 534
Query: 633 AISDALGSKSKLEAKRRKK 651
+S A + +K + KK
Sbjct: 535 IVSKADQASNKPLGQSEKK 553
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 16/69 (23%)
Query: 105 YGPVCPGCGIFMQDKDPNLPGYYKQKKDIERN----------------EEFLEDEEGIEN 148
+ VCPGCG+ MQD +P PG++ + + N EFL+ IE
Sbjct: 72 FSLVCPGCGVHMQDSNPKHPGFFIKPSKKDSNYRLLTHLVPVDDESECSEFLKRGLVIEP 131
Query: 149 DIEGFEEDI 157
+ E EED+
Sbjct: 132 EKEKTEEDV 140
>gi|357473899|ref|XP_003607234.1| hypothetical protein MTR_4g074870 [Medicago truncatula]
gi|355508289|gb|AES89431.1| hypothetical protein MTR_4g074870 [Medicago truncatula]
Length = 575
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 216/412 (52%), Positives = 305/412 (74%), Gaps = 4/412 (0%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
VCARCHSLR+YG+VK+ ENL+PDFDFD + +L S + VV+MVVD VDFDG
Sbjct: 149 VCARCHSLRHYGKVKDPTVENLLPDFDFDHTVGRKLA--SASRTRSVVLMVVDAVDFDGS 206
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKK--LPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
FP++ + + K +E+ K K +P++VLV TK+DLLPS +SPTRL+ W+R RA+
Sbjct: 207 FPRKVSNLVSKTIEDNYTAWKQGKSGNVPRVVLVVTKIDLLPSSLSPTRLEHWIRQRARE 266
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGV 424
GG K+ +++VS+ +D G++NL+ I ELAG RGNVW +GAQNAGKSTLIN+ K G
Sbjct: 267 GGIIKITSLHMVSSLRDWGLKNLVEDIVELAGSRGNVWTVGAQNAGKSTLINSIGKHVGG 326
Query: 425 KVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKEL 484
K+S LTEAP+PGTTLGI+R+ G LP++AKL+DTPGLLHP+ ++ RL R+EQK+V + KEL
Sbjct: 327 KISHLTEAPVPGTTLGIVRVEGALPSQAKLFDTPGLLHPYQITTRLMREEQKLVYMTKEL 386
Query: 485 QPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+PRTYR+K G ++H+ GLMRLD+++ S++TIYVTVWASP + LH+GKIENA +++K++ G
Sbjct: 387 KPRTYRIKAGHSIHIAGLMRLDVEETSLDTIYVTVWASPYLPLHMGKIENASKMFKDYFG 446
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
+LQPPIG++R ELG W R+ V G SWD + +DIAAAGLGWF++GLKGEA L+ WTY
Sbjct: 447 HQLQPPIGEERVKELGNWVRREFHVCGNSWDSSSVDIAAAGLGWFAIGLKGEAVLSAWTY 506
Query: 605 DGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRRKKLEETE 656
+G+++ R L+ R+ E GF + K +S + + +K + ++ K +++
Sbjct: 507 EGVDVVQRNSLIPYRSNTFEVAGFTVSKIVSQSDRASNKPRSDKKAKRNDSK 558
>gi|297746417|emb|CBI16473.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/435 (52%), Positives = 310/435 (71%), Gaps = 6/435 (1%)
Query: 220 RSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIA 279
RS+ + AE + + +K + VCARCHSLR+YG+VK+ ENL+P+FDFD +
Sbjct: 158 RSRIDRRPVAEEPEISDSLKKGLLKPVVCARCHSLRHYGKVKDPTVENLLPEFDFDHTVG 217
Query: 280 TRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKK--LPKLVL 337
RL+ SG + VV+MVVD DFDG FPKR AK + ++E K+ K +P++VL
Sbjct: 218 RRLVSTSGTRS--VVLMVVDASDFDGSFPKRVAKMVSTTIDENYTAWKMGKSGNVPRVVL 275
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
V TK+DLLPS +SPTR + WVR RA+ GGA KL V+LVS+ +D G++NL+ I +L G
Sbjct: 276 VVTKIDLLPSSLSPTRFEHWVRQRAREGGANKLTSVHLVSSVRDWGLKNLVDDIVQLVGR 335
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
RGNVW IGAQNAGKSTLIN+ K G K++ LTEAP+PGTTLGI+R+ G+L AKL+DT
Sbjct: 336 RGNVWAIGAQNAGKSTLINSIGKHAGGKLTHLTEAPVPGTTLGIVRVEGVLTGAAKLFDT 395
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PGLL+PH ++ RL +EQK+V + KEL+PRTYR+K G +VH+ GL RLD+++ SV+T+Y+
Sbjct: 396 PGLLNPHQITTRLTGEEQKLVHVSKELKPRTYRIKAGHSVHIAGLARLDVEELSVDTVYI 455
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
TVWASP + LH+GK ENA + ++H G +LQPPIG+ R ELG W+ ++ +VSGTSWD +
Sbjct: 456 TVWASPYLPLHMGKTENACTMVEDHFGRQLQPPIGERRVKELGKWERKEFRVSGTSWDSS 515
Query: 578 GIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAIS-- 635
+D+A AGLGWF++GLKGEA L +WTYDG+++ LR L+ R+ E GF + K +S
Sbjct: 516 SVDVAVAGLGWFAVGLKGEAVLGVWTYDGVDLILRNSLLPYRSQNFEVAGFTVSKIVSKA 575
Query: 636 DALGSKSKLEAKRRK 650
D +KS KRRK
Sbjct: 576 DQASNKSGQSQKRRK 590
>gi|225435640|ref|XP_002285660.1| PREDICTED: uncharacterized protein yqeH-like [Vitis vinifera]
Length = 584
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/408 (54%), Positives = 299/408 (73%), Gaps = 6/408 (1%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
VCARCHSLR+YG+VK+ ENL+P+FDFD + RL+ SG + VV+MVVD DFDG
Sbjct: 159 VCARCHSLRHYGKVKDPTVENLLPEFDFDHTVGRRLVSTSGTRS--VVLMVVDASDFDGS 216
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKK--LPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
FPKR AK + ++E K+ K +P++VLV TK+DLLPS +SPTR + WVR RA+
Sbjct: 217 FPKRVAKMVSTTIDENYTAWKMGKSGNVPRVVLVVTKIDLLPSSLSPTRFEHWVRQRARE 276
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGV 424
GGA KL V+LVS+ +D G++NL+ I +L G RGNVW IGAQNAGKSTLIN+ K G
Sbjct: 277 GGANKLTSVHLVSSVRDWGLKNLVDDIVQLVGRRGNVWAIGAQNAGKSTLINSIGKHAGG 336
Query: 425 KVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKEL 484
K++ LTEAP+PGTTLGI+R+ G+L AKL+DTPGLL+PH ++ RL +EQK+V + KEL
Sbjct: 337 KLTHLTEAPVPGTTLGIVRVEGVLTGAAKLFDTPGLLNPHQITTRLTGEEQKLVHVSKEL 396
Query: 485 QPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+PRTYR+K G +VH+ GL RLD+++ SV+T+Y+TVWASP + LH+GK ENA + ++H G
Sbjct: 397 KPRTYRIKAGHSVHIAGLARLDVEELSVDTVYITVWASPYLPLHMGKTENACTMVEDHFG 456
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
+LQPPIG+ R ELG W+ ++ +VSGTSWD + +D+A AGLGWF++GLKGEA L +WTY
Sbjct: 457 RQLQPPIGERRVKELGKWERKEFRVSGTSWDSSSVDVAVAGLGWFAVGLKGEAVLGVWTY 516
Query: 605 DGIEITLREPLVLDRAPFLERPGFWLPKAIS--DALGSKSKLEAKRRK 650
DG+++ LR L+ R+ E GF + K +S D +KS KRRK
Sbjct: 517 DGVDLILRNSLLPYRSQNFEVAGFTVSKIVSKADQASNKSGQSQKRRK 564
>gi|297809289|ref|XP_002872528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318365|gb|EFH48787.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 597
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/431 (50%), Positives = 304/431 (70%), Gaps = 7/431 (1%)
Query: 226 LSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKP 285
++ ++ K E + VCARCHSLR+YG+VK+ ENL+PDFDFD + RL
Sbjct: 141 INSSDLNPKDHEETDQDSRPLVCARCHSLRHYGKVKDPTVENLLPDFDFDHTVGRRLGSA 200
Query: 286 SGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKK--LPKLVLVGTKVD 343
SG VV+MVVD DFDG FPKR AK + + ++E K K +P++V+V TK+D
Sbjct: 201 SGART--VVLMVVDASDFDGSFPKRVAKLVSRTIDENNMAWKEGKSGNVPRVVVVVTKID 258
Query: 344 LLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWV 403
LLPS +SPTR + WVR RA+ GG K+ ++ VS K+ G+++L+ + +AG RG+VW
Sbjct: 259 LLPSSLSPTRFEHWVRLRAREGGLSKITKLHFVSPIKNWGIKDLVEDVAAMAGKRGHVWA 318
Query: 404 IGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHP 463
+G+QNAGKSTLIN K G KV LTEAP+PGTTLGI+RI G+LP +AKL+DTPGLL+P
Sbjct: 319 VGSQNAGKSTLINAVGKVVGGKVWHLTEAPVPGTTLGIIRIEGVLPFEAKLFDTPGLLNP 378
Query: 464 HLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASP 523
H ++ RL R+EQ++V I KEL+PRTYR+K G VH+GGLMRLD+D++SV+++YVTVWASP
Sbjct: 379 HQITTRLTREEQRLVHISKELKPRTYRIKEGYTVHIGGLMRLDIDESSVDSLYVTVWASP 438
Query: 524 NVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAA 583
V LH+GK ENA + ++H G RLQPPIG+ R ELG W ++ +VSG+SWD + +DIA
Sbjct: 439 YVPLHMGKKENAYKTLEDHFGCRLQPPIGEKRVEELGKWVRKEFRVSGSSWDTSSVDIAV 498
Query: 584 AGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDA---LGS 640
+GLGWF++GLKGEA L +WT++GI++ R+ L+ RA E GF + K ++ A
Sbjct: 499 SGLGWFAIGLKGEAILGVWTHEGIDVFCRDSLLPQRANTFEDSGFTVSKIVAKADRNFNQ 558
Query: 641 KSKLEAKRRKK 651
K+E ++++K
Sbjct: 559 IHKVETQKKRK 569
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 108 VCPGCGIFMQDKDPNLPGYY------KQKKDIE-RNEEFLEDE-EGIENDIEGF-EEDIV 158
VCPGCG+ MQ+ +P PG++ KQ+ D+ RN + E E I++ GF E I
Sbjct: 83 VCPGCGVHMQNSNPKHPGFFIKPSTEKQRNDLNLRNLVPISQEPEFIDSIKRGFIIEPIN 142
Query: 159 DGNFDQSDGKESD 171
+ + D +E+D
Sbjct: 143 SSDLNPKDHEETD 155
>gi|168011635|ref|XP_001758508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690118|gb|EDQ76486.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 456
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/390 (54%), Positives = 291/390 (74%), Gaps = 8/390 (2%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
+V VCARCH+LRNYG+VK+E ENL+PDFDF+RV+ RL K G VV+MVVD DF
Sbjct: 59 KVVVCARCHALRNYGKVKDESVENLLPDFDFERVVGARLKKAYGRR--AVVLMVVDGSDF 116
Query: 304 DGMFPKRAAKSLFKKLEE---AKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DG FP++AA+ L + EE A + K S P+L++V K+DLLP Q+S RL++WVR
Sbjct: 117 DGSFPRKAAEVLAEADEELGTAWQEGK-SGNTPRLLVVMNKIDLLPKQISANRLEQWVRR 175
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
R+KAGG ++ GV+ VSA K G+ L IK+LAGPRG+ WV+GAQNAGKS+LIN+ AK
Sbjct: 176 RSKAGGVTRIAGVHTVSAFKGWGIEQLADHIKQLAGPRGDCWVVGAQNAGKSSLINSLAK 235
Query: 421 KEGVK--VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMV 478
G K V+ LTEA +PGTTLG+L++ GILPA+A+L+DTPGL+HPH +S +LNR+E K+V
Sbjct: 236 FAGEKRRVTALTEAAVPGTTLGVLKLEGILPARARLFDTPGLIHPHQLSTKLNREELKLV 295
Query: 479 EIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEI 538
E+RKEL+PRT+RVK G VHV GL+RLD+ +A E+IYVTVWAS +S H+GK E A+E+
Sbjct: 296 EVRKELKPRTFRVKVGSTVHVAGLLRLDVMEAPSESIYVTVWASALLSCHMGKTEKAEEL 355
Query: 539 WKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEAS 598
++ H+G RL PP+ ++RA+E+G W R++ V+G SW+ + +D+A AGLGW +G+KG A
Sbjct: 356 FEKHLGDRLAPPVDKERAAEIGRWVARRVTVTGDSWEHSSVDVAVAGLGWVGIGVKGIAV 415
Query: 599 LTLWTYDGIEITLREPLVLDRAPFLERPGF 628
L WTY+G+++T E +V D A E+PGF
Sbjct: 416 LQAWTYEGVQVTTHEAMVFDMAAIFEKPGF 445
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 13/52 (25%)
Query: 109 CPGCGIFMQDKDPNLPGYYKQKKDIERNEEFLEDEEGIENDIEGFEEDIVDG 160
CPGCG++MQD DP PGY+K + ++ +DE FEE++V G
Sbjct: 1 CPGCGVYMQDTDPKRPGYFKMPANFGKS----DDE---------FEENVVGG 39
>gi|18413362|ref|NP_567364.1| GTPase YqeH-like protein [Arabidopsis thaliana]
gi|4115915|gb|AAD03426.1| contains similarity to Helix pomatia br-1 protein (GB: X96994)
[Arabidopsis thaliana]
gi|15293099|gb|AAK93660.1| unknown protein [Arabidopsis thaliana]
gi|21281233|gb|AAM45035.1| unknown protein [Arabidopsis thaliana]
gi|332657510|gb|AEE82910.1| GTPase YqeH-like protein [Arabidopsis thaliana]
Length = 597
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/431 (51%), Positives = 305/431 (70%), Gaps = 5/431 (1%)
Query: 236 REAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVV 295
R+ + VCARCHSLR+YG+VK+ ENL+PDFDFD + RL SG VV+
Sbjct: 151 RDDEPSDSRPLVCARCHSLRHYGRVKDPTVENLLPDFDFDHTVGRRLGSASGART--VVL 208
Query: 296 MVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKK--LPKLVLVGTKVDLLPSQVSPTR 353
MVVD DFDG FPKR AK + + ++E K K +P++V+V TK+DLLPS +SP R
Sbjct: 209 MVVDASDFDGSFPKRVAKLVSRTIDENNMAWKEGKSGNVPRVVVVVTKIDLLPSSLSPNR 268
Query: 354 LDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
++WVR RA+ GG K+ ++ VS K+ G+++L+ + +AG RG+VW +G+QNAGKST
Sbjct: 269 FEQWVRLRAREGGLSKITKLHFVSPVKNWGIKDLVEDVAAMAGKRGHVWAVGSQNAGKST 328
Query: 414 LINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
LIN K G KV LTEAP+PGTTLGI+RI G+LP +AKL+DTPGLL+PH ++ RL R+
Sbjct: 329 LINAVGKVVGGKVWHLTEAPVPGTTLGIIRIEGVLPFEAKLFDTPGLLNPHQITTRLTRE 388
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIE 533
EQ++V I KEL+PRTYR+K G VH+GGLMRLD+D+ASV+++YVTVWASP V LH+GK E
Sbjct: 389 EQRLVHISKELKPRTYRIKEGYTVHIGGLMRLDIDEASVDSLYVTVWASPYVPLHMGKKE 448
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGL 593
NA + ++H G RLQPPIG+ R ELG W ++ +VSGTSWD + +DIA +GLGWF+LGL
Sbjct: 449 NAYKTLEDHFGCRLQPPIGEKRVEELGKWVRKEFRVSGTSWDTSSVDIAVSGLGWFALGL 508
Query: 594 KGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKR-RKKL 652
KG+A L +WT++GI++ R+ L+ RA E GF + K ++ A + +++ + +KK
Sbjct: 509 KGDAILGVWTHEGIDVFCRDSLLPQRAHTFEDSGFTVSKIVAKADRNFNQIHKEETQKKR 568
Query: 653 EETEDFLSEVS 663
+ + F VS
Sbjct: 569 KPNKSFSDSVS 579
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 108 VCPGCGIFMQDKDPNLPGYY-KQKKDIERNEEFLEDEEGIENDIEGFE--------EDIV 158
VCPGCG+ MQ+ +P PG++ K + +RN+ L D I + E + E I
Sbjct: 85 VCPGCGVHMQNSNPKHPGFFIKPSTEKQRNDLNLRDLTPISQEPEFIDSIKRGFIIEPIS 144
Query: 159 DGNFDQSDGKESDS 172
+ + D + SDS
Sbjct: 145 SSDLNPRDDEPSDS 158
>gi|4539440|emb|CAB40028.1| putative protein [Arabidopsis thaliana]
gi|7267759|emb|CAB78185.1| putative protein [Arabidopsis thaliana]
Length = 605
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/439 (50%), Positives = 305/439 (69%), Gaps = 13/439 (2%)
Query: 236 REAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVV 295
R+ + VCARCHSLR+YG+VK+ ENL+PDFDFD + RL SG VV+
Sbjct: 151 RDDEPSDSRPLVCARCHSLRHYGRVKDPTVENLLPDFDFDHTVGRRLGSASGART--VVL 208
Query: 296 MVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKK--LPKLVLVGTKVDLLPSQVSPTR 353
MVVD DFDG FPKR AK + + ++E K K +P++V+V TK+DLLPS +SP R
Sbjct: 209 MVVDASDFDGSFPKRVAKLVSRTIDENNMAWKEGKSGNVPRVVVVVTKIDLLPSSLSPNR 268
Query: 354 LDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
++WVR RA+ GG K+ ++ VS K+ G+++L+ + +AG RG+VW +G+QNAGKST
Sbjct: 269 FEQWVRLRAREGGLSKITKLHFVSPVKNWGIKDLVEDVAAMAGKRGHVWAVGSQNAGKST 328
Query: 414 LINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
LIN K G KV LTEAP+PGTTLGI+RI G+LP +AKL+DTPGLL+PH ++ RL R+
Sbjct: 329 LINAVGKVVGGKVWHLTEAPVPGTTLGIIRIEGVLPFEAKLFDTPGLLNPHQITTRLTRE 388
Query: 474 EQKMVEIRKELQPRTYRVK--------GGQAVHVGGLMRLDLDQASVETIYVTVWASPNV 525
EQ++V I KEL+PRTYR+K G VH+GGLMRLD+D+ASV+++YVTVWASP V
Sbjct: 389 EQRLVHISKELKPRTYRIKVWFNIIECEGYTVHIGGLMRLDIDEASVDSLYVTVWASPYV 448
Query: 526 SLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAG 585
LH+GK ENA + ++H G RLQPPIG+ R ELG W ++ +VSGTSWD + +DIA +G
Sbjct: 449 PLHMGKKENAYKTLEDHFGCRLQPPIGEKRVEELGKWVRKEFRVSGTSWDTSSVDIAVSG 508
Query: 586 LGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLE 645
LGWF+LGLKG+A L +WT++GI++ R+ L+ RA E GF + K ++ A + +++
Sbjct: 509 LGWFALGLKGDAILGVWTHEGIDVFCRDSLLPQRAHTFEDSGFTVSKIVAKADRNFNQIH 568
Query: 646 AKR-RKKLEETEDFLSEVS 663
+ +KK + + F VS
Sbjct: 569 KEETQKKRKPNKSFSDSVS 587
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 108 VCPGCGIFMQDKDPNLPGYY-KQKKDIERNEEFLEDEEGIENDIEGFE--------EDIV 158
VCPGCG+ MQ+ +P PG++ K + +RN+ L D I + E + E I
Sbjct: 85 VCPGCGVHMQNSNPKHPGFFIKPSTEKQRNDLNLRDLTPISQEPEFIDSIKRGFIIEPIS 144
Query: 159 DGNFDQSDGKESDS 172
+ + D + SDS
Sbjct: 145 SSDLNPRDDEPSDS 158
>gi|356538577|ref|XP_003537779.1| PREDICTED: uncharacterized protein yqeH-like [Glycine max]
Length = 592
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/408 (51%), Positives = 299/408 (73%), Gaps = 4/408 (0%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
VCARCHSLR+YG+VK+ ENL+PDFDFD + +L SG + ++V+ V DFDG
Sbjct: 163 VVCARCHSLRHYGKVKDPTVENLLPDFDFDHTVGRKLASASGTRSVVLMVVDVV--DFDG 220
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKK--LPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
FP++ AK + K +E+ K K +P++VLV TK+DLLPS +SPTRL+ W+R RA+
Sbjct: 221 SFPRKVAKLVSKTIEDHSAAWKQGKSGNVPRVVLVVTKIDLLPSSLSPTRLEHWIRQRAR 280
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
GG K++ +++VSA +D G++NL+ I +LAGPRGNVW +GAQNAGKSTLIN+ K G
Sbjct: 281 EGGINKVSSLHMVSALRDWGLKNLVDNIVDLAGPRGNVWAVGAQNAGKSTLINSIGKYAG 340
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
K++ LTEAP+PGTTLGI+R+ G+ ++AKL+DTPGLLHP+ ++ RL R+EQK+V + KE
Sbjct: 341 GKITHLTEAPVPGTTLGIVRVEGVFSSQAKLFDTPGLLHPYQITTRLMREEQKLVHVGKE 400
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRTYR+K G ++H+ GL+RLD+++ +++IYVTVWASP + LH+GKIENA +++++H
Sbjct: 401 LKPRTYRIKAGHSIHIAGLVRLDIEETPLDSIYVTVWASPYLPLHMGKIENACKMFQDHF 460
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G +LQPPIG+ R ELG W R+ VSG SW+ + +DIA AGLGWF+ GLKG+A L +WT
Sbjct: 461 GCQLQPPIGEKRVQELGNWVRREFHVSGNSWESSSVDIAVAGLGWFAFGLKGDAVLGVWT 520
Query: 604 YDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRRKK 651
Y+G++ LR L+ R+ E GF + K +S + + +K + + KK
Sbjct: 521 YEGVDAVLRNALIPYRSNTFEIAGFTVSKIVSQSDQALNKSKQRNDKK 568
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 45 FNTCLLPY----LRNKKRLSLISLAVKNRSNSEATVNSYGKINKPRKGSGNTLILSEGRD 100
F++ L+PY L+N + R S +S K N P GN E
Sbjct: 28 FHSSLIPYSKPHLQNFPKFYPQPSTNLFRFFSSQPADSTEKQNLPLSREGN---YDEVNS 84
Query: 101 EDEHYGPVCPGCGIFMQDKDPNLPGYYKQKKDIERNEEFLEDEEGIENDIE 151
+ H VCPGCG++MQD +P PGY+ + + + + + E + + E
Sbjct: 85 QSLH---VCPGCGVYMQDSNPKHPGYFIKPSEKDLSYRLYNNLEPVAQEPE 132
>gi|302768775|ref|XP_002967807.1| hypothetical protein SELMODRAFT_62387 [Selaginella moellendorffii]
gi|302799922|ref|XP_002981719.1| hypothetical protein SELMODRAFT_52473 [Selaginella moellendorffii]
gi|300150551|gb|EFJ17201.1| hypothetical protein SELMODRAFT_52473 [Selaginella moellendorffii]
gi|300164545|gb|EFJ31154.1| hypothetical protein SELMODRAFT_62387 [Selaginella moellendorffii]
Length = 459
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/528 (43%), Positives = 316/528 (59%), Gaps = 78/528 (14%)
Query: 108 VCPGCGIFMQDKDPNLPGYYKQKKDIERNEEFLEDEEGIENDIEGFEE---DIVDGNFDQ 164
+CPGCG++MQD DP PGY++ F + +ND++ EE DI+DG
Sbjct: 1 ICPGCGVYMQDTDPLQPGYFR----------FTPPSDYHKNDVKSLEETWEDIIDG---- 46
Query: 165 SDGKESDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKK 224
EE ER K++
Sbjct: 47 -------------------------------------------------AEEADERKKRR 57
Query: 225 KLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMK 284
+ K+ +++K E + + VCARCHSL+ YG+VK + AE L+P FDFD+++ RL
Sbjct: 58 DMLKSFKREKPSEER-----LVVCARCHSLKYYGRVKEKTAETLLPTFDFDKMVGQRLKT 112
Query: 285 PSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEE---AKDDAKLSKKLPKLVLVGTK 341
G VV+MVVD DFDG FP++ AK L ++E A + P+L++ TK
Sbjct: 113 AYGKR--AVVLMVVDSSDFDGSFPRQVAK-LISEVEAQMAATYRTGFTGNSPRLIVAATK 169
Query: 342 VDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNV 401
VDLLP Q+SP RL++W+R R GGAP+ V+LVSA K+ GV+ L I ++AGPRG+V
Sbjct: 170 VDLLPPQLSPMRLEQWIRKRVIIGGAPRPTAVHLVSATKNWGVQALTERITKVAGPRGDV 229
Query: 402 WVIGAQNAGKSTLINTFAK-KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGL 460
WV+GAQNAGKS+LIN A+ G S+LTEA PGTT+GIL+I GILP KLYDTPG+
Sbjct: 230 WVVGAQNAGKSSLINALARFNVGKHESRLTEAAHPGTTIGILKITGILPQNIKLYDTPGI 289
Query: 461 LHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVW 520
H H ++MRLN ++ K V++RKEL+PRT+R+K G ++ VGG +RLDL +A TIY+TVW
Sbjct: 290 FHSHQLTMRLNEEDFKSVQMRKELKPRTFRIKVGHSIQVGGYLRLDLLEAPARTIYMTVW 349
Query: 521 ASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGID 580
ASP +SLH+GK E A +++K H+G+ L+PP E G + +K +V G W+ + +D
Sbjct: 350 ASPFISLHMGKTERALDVFKKHIGVELKPPSSLKSWIEQGQFVSQKFRVHGDDWEASTVD 409
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGF 628
IA AGLGW LGLKGEA + +WTY+G+ ++ RE LV D A E PGF
Sbjct: 410 IAVAGLGWVGLGLKGEAVIEVWTYEGVAVSTREALVYDYARIFETPGF 457
>gi|242044516|ref|XP_002460129.1| hypothetical protein SORBIDRAFT_02g023120 [Sorghum bicolor]
gi|241923506|gb|EER96650.1| hypothetical protein SORBIDRAFT_02g023120 [Sorghum bicolor]
Length = 597
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/543 (43%), Positives = 322/543 (59%), Gaps = 65/543 (11%)
Query: 108 VCPGCGIFMQDKDPNLPGYYKQKKDIERNEEFLEDEEGIENDIEGFEEDIVDGNFDQSDG 167
VCPGCGI MQ DP LP G F
Sbjct: 81 VCPGCGISMQSSDPALP-----------------------------------GFFLLPSA 105
Query: 168 KESDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLS 227
K D + A+ DD + A + G++ E+L K +
Sbjct: 106 KSPD--------------YRARLAPVTTDDTRIS----ASLKSGHLREDLEPSGSDKPAA 147
Query: 228 KAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSG 287
A + K +G+V VCARCHSLR+YG+VK+ AE L+PDFDF + RL PSG
Sbjct: 148 AAAEMADS----KGEGKVLVCARCHSLRHYGRVKHPDAERLLPDFDFVAAVGPRLASPSG 203
Query: 288 NANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK--LSKKLPKLVLVGTKVDLL 345
+ +V+++ D DFDG FP+ A+ + E D K LP+ +LV TK+DLL
Sbjct: 204 ARS--LVLLLADASDFDGSFPRAVARLVAAAGEAHSADWKHGAPANLPRALLVVTKLDLL 261
Query: 346 PS-QVSPTRLDRWVRHRAKAGGAP--KLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVW 402
P+ +SP + W RA+AG +L GV+LVSA + GVR+LL ++ELAG RGNVW
Sbjct: 262 PTPSLSPDDVHAWAHSRARAGAGSDLRLAGVHLVSAARGWGVRDLLEHVRELAGTRGNVW 321
Query: 403 VIGAQNAGKSTLINTFAKKEGVK-VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLL 461
+GA+N GKSTL+N A+ G+ LTEAP+PGTTL ++++ G+L A+AKL+DTPGLL
Sbjct: 322 AVGARNVGKSTLLNAIARCSGIAGRPTLTEAPVPGTTLDVIKLDGVLGAQAKLFDTPGLL 381
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWA 521
H H ++ RL +E K+V++RKE+ PRTYR+K GQ++H+GGL+RLD+++ +V +IYVTVWA
Sbjct: 382 HGHQLTSRLTSEEMKLVQVRKEMSPRTYRIKTGQSIHIGGLVRLDVEELTVGSIYVTVWA 441
Query: 522 SPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDI 581
+P V LH+GK ENA + K H G++LQPPIGQ++ ELG W ++ KVSG SWD+N DI
Sbjct: 442 APLVPLHMGKTENAAALMKEHFGLQLQPPIGQEQVKELGKWVRKQFKVSGNSWDMNSKDI 501
Query: 582 AAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSK 641
A AG+GWF +GLKGEA L LWTYDG+++ R LV +RA E GF + + +S A
Sbjct: 502 AIAGIGWFGIGLKGEAVLGLWTYDGVDVISRSSLVHERASIFEEAGFTVSQIVSKADSMT 561
Query: 642 SKL 644
+KL
Sbjct: 562 NKL 564
>gi|125605432|gb|EAZ44468.1| hypothetical protein OsJ_29085 [Oryza sativa Japonica Group]
Length = 596
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/408 (52%), Positives = 288/408 (70%), Gaps = 9/408 (2%)
Query: 236 REAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVV 295
+E +KE +V VCARCHSLR+YG VK AE L+PDFDF + RL PSG + +V+
Sbjct: 152 KEGKKEN-KVVVCARCHSLRHYGVVKRPEAEPLLPDFDFVAAVGPRLASPSGARS--LVL 208
Query: 296 MVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK--LSKKLPKLVLVGTKVDLLPS-QVSPT 352
++ D DFDG FP+ A+ + E D K LP+ +LV TK+DLLP+ +SP
Sbjct: 209 LLADASDFDGSFPRAVARLVAAAGEAHGSDWKHGAPANLPRALLVVTKLDLLPTPSLSPD 268
Query: 353 RLDRWV--RHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
+ W R RA AGG +L GV+LVSA + GVR+LL +++LAG RGNVW +GA+N G
Sbjct: 269 DVHAWAHSRARAGAGGDLRLAGVHLVSAARGWGVRDLLDHVRQLAGSRGNVWAVGARNVG 328
Query: 411 KSTLINTFAKKEGVKVS-KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMR 469
KSTL+N A+ G++ LTEAP+PGTTL ++++ G+L ++AKL+DTPGLLH H ++ R
Sbjct: 329 KSTLLNAIARCSGIEGGPTLTEAPVPGTTLDVIQVDGVLGSQAKLFDTPGLLHGHQLTSR 388
Query: 470 LNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHL 529
L R+EQK+V + KE++PRTYR+K GQ+VH+GGL+RLD+++ +V ++YVTVWASP V LH+
Sbjct: 389 LTREEQKLVRVSKEMRPRTYRLKPGQSVHIGGLVRLDIEELTVGSVYVTVWASPLVPLHM 448
Query: 530 GKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWF 589
GK ENA + K+H G++LQPPIGQ R +ELG W ++ KVSG SWDVN DIA AGLGWF
Sbjct: 449 GKTENAAAMVKDHFGLQLQPPIGQQRVNELGKWVRKQFKVSGNSWDVNSKDIAIAGLGWF 508
Query: 590 SLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDA 637
+GLKGEA L LWTYDG+++ R LV +RA E GF + K +S A
Sbjct: 509 GIGLKGEAVLGLWTYDGVDVVSRNSLVHERATIFEEAGFTVSKIVSQA 556
>gi|50725922|dbj|BAD33450.1| GTP-binding protein-like [Oryza sativa Japonica Group]
gi|50726207|dbj|BAD33726.1| GTP-binding protein-like [Oryza sativa Japonica Group]
gi|215769235|dbj|BAH01464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218202025|gb|EEC84452.1| hypothetical protein OsI_31074 [Oryza sativa Indica Group]
Length = 604
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/408 (52%), Positives = 288/408 (70%), Gaps = 9/408 (2%)
Query: 236 REAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVV 295
+E +KE +V VCARCHSLR+YG VK AE L+PDFDF + RL PSG + +V+
Sbjct: 160 KEGKKEN-KVVVCARCHSLRHYGVVKRPEAEPLLPDFDFVAAVGPRLASPSGARS--LVL 216
Query: 296 MVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK--LSKKLPKLVLVGTKVDLLPS-QVSPT 352
++ D DFDG FP+ A+ + E D K LP+ +LV TK+DLLP+ +SP
Sbjct: 217 LLADASDFDGSFPRAVARLVAAAGEAHGSDWKHGAPANLPRALLVVTKLDLLPTPSLSPD 276
Query: 353 RLDRWV--RHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
+ W R RA AGG +L GV+LVSA + GVR+LL +++LAG RGNVW +GA+N G
Sbjct: 277 DVHAWAHSRARAGAGGDLRLAGVHLVSAARGWGVRDLLDHVRQLAGSRGNVWAVGARNVG 336
Query: 411 KSTLINTFAKKEGVKVS-KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMR 469
KSTL+N A+ G++ LTEAP+PGTTL ++++ G+L ++AKL+DTPGLLH H ++ R
Sbjct: 337 KSTLLNAIARCSGIEGGPTLTEAPVPGTTLDVIQVDGVLGSQAKLFDTPGLLHGHQLTSR 396
Query: 470 LNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHL 529
L R+EQK+V + KE++PRTYR+K GQ+VH+GGL+RLD+++ +V ++YVTVWASP V LH+
Sbjct: 397 LTREEQKLVRVSKEMRPRTYRLKPGQSVHIGGLVRLDIEELTVGSVYVTVWASPLVPLHM 456
Query: 530 GKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWF 589
GK ENA + K+H G++LQPPIGQ R +ELG W ++ KVSG SWDVN DIA AGLGWF
Sbjct: 457 GKTENAAAMVKDHFGLQLQPPIGQQRVNELGKWVRKQFKVSGNSWDVNSKDIAIAGLGWF 516
Query: 590 SLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDA 637
+GLKGEA L LWTYDG+++ R LV +RA E GF + K +S A
Sbjct: 517 GIGLKGEAVLGLWTYDGVDVVSRNSLVHERATIFEEAGFTVSKIVSQA 564
>gi|357153475|ref|XP_003576463.1| PREDICTED: uncharacterized protein yqeH-like [Brachypodium
distachyon]
Length = 584
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/426 (51%), Positives = 303/426 (71%), Gaps = 9/426 (2%)
Query: 237 EAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVM 296
EA++E +V VCARCHSLR+YG VK AE L+PDFDF + RL PSG + +V++
Sbjct: 145 EAKRES-KVLVCARCHSLRHYGHVKRPDAEVLLPDFDFVAAVGPRLASPSGARS--LVLL 201
Query: 297 VVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK--LSKKLPKLVLVGTKVDLLPS-QVSPTR 353
+ D DFDG FP+ A+ + E ++D K LP+ VLV TK+DLLP+ +SP
Sbjct: 202 LADASDFDGSFPRAVARLVAAAGEAHQEDWKRGAPANLPRAVLVVTKLDLLPTPSLSPDD 261
Query: 354 LDRWVRHRAKAGGAP--KLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
+ W + RA+AG +L GV+LVSA + GVR+LL ++ELAG RG VW +GA+N GK
Sbjct: 262 VHAWAQARARAGAGADLQLAGVHLVSAARGWGVRDLLNHVRELAGARGKVWAVGARNVGK 321
Query: 412 STLINTFAKKEGVKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRL 470
STL+N A+ G + K LTEAP+PGTTLG++R+ GIL A+AKL+DTPGLLH H ++ RL
Sbjct: 322 STLLNAIARCSGAEGGKILTEAPVPGTTLGVIRVDGILGAQAKLFDTPGLLHGHQLTSRL 381
Query: 471 NRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLG 530
+EQK+V++RKE+QPRTYR+K GQ++H+GGL+RLD+++ +V +IYVTVWASP V LH+G
Sbjct: 382 TLEEQKIVQVRKEMQPRTYRIKAGQSIHIGGLVRLDIEELTVGSIYVTVWASPLVPLHMG 441
Query: 531 KIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFS 590
K ENA + K+H G++LQPPIGQ R SELG W ++ KVSG SWD N +DIA +GLGW+
Sbjct: 442 KTENAASMMKDHFGLQLQPPIGQKRVSELGKWVRKQFKVSGNSWDSNSMDIAISGLGWYG 501
Query: 591 LGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRRK 650
+GLKGE+ L LWTYDG+++ R LV +RA E PGF + K +S A +K+++ ++
Sbjct: 502 IGLKGESVLGLWTYDGVDVVPRSSLVHERASIFEEPGFSVSKIVSQADSMTNKVKSSKKA 561
Query: 651 KLEETE 656
+E++
Sbjct: 562 NKKESK 567
>gi|293335703|ref|NP_001168377.1| uncharacterized protein LOC100382146 [Zea mays]
gi|223947863|gb|ACN28015.1| unknown [Zea mays]
gi|414885176|tpg|DAA61190.1| TPA: hypothetical protein ZEAMMB73_567116 [Zea mays]
Length = 585
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/404 (51%), Positives = 281/404 (69%), Gaps = 8/404 (1%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVD 299
K +G+V VCARCHSLR+YG+VK+ AE L+PDFDF + RL PSG + +V+++ D
Sbjct: 156 KGEGKVLVCARCHSLRHYGRVKHPDAERLLPDFDFVAAVGPRLASPSGARS--LVLLLAD 213
Query: 300 CVDFDGMFPKRAAKSLFKKLEEAKDDAK--LSKKLPKLVLVGTKVDLLPS-QVSPTRLDR 356
DFDG FP+ A+ + E + D K LP+ +LV TK+DLLP+ +SP +
Sbjct: 214 ASDFDGSFPRAVARLVAAAGEAHRADWKHGAPANLPRALLVVTKLDLLPTPSLSPDDVHA 273
Query: 357 WVRHRAKAGGAP--KLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
W RA+AG +L GV+LVSA + GVR+LL ++ELAG RGNVW +GA+N GKSTL
Sbjct: 274 WAHSRARAGAGADLRLAGVHLVSATRGWGVRDLLEHVRELAGTRGNVWAVGARNVGKSTL 333
Query: 415 INTFAKKEG-VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
+N A+ G V LTEAP+PGTTL ++++ G+L A+AKL+DTPGLLH H ++ RL +
Sbjct: 334 LNAIARCCGIVGRPTLTEAPVPGTTLDVIKLDGVLGAQAKLFDTPGLLHGHQLTSRLTSE 393
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIE 533
E K+V++RKE+ PRTYR+K ++H+GGL+RLD+++ +V +IYVTVWASP V LH+GK E
Sbjct: 394 EMKLVQVRKEMSPRTYRIKTEHSIHIGGLVRLDVEELTVGSIYVTVWASPLVPLHMGKTE 453
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGL 593
N + K H G++LQPPIGQ+R ELG W ++ KVSG SWD N DIA AGLGWF +GL
Sbjct: 454 NTTTLIKEHFGLQLQPPIGQERVKELGKWVRKQFKVSGNSWDTNSKDIAIAGLGWFGIGL 513
Query: 594 KGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDA 637
KGEA L LWTYDG+++ R LV +RA E GF + + +S A
Sbjct: 514 KGEAVLGLWTYDGVDVISRSSLVHERASVFEEAGFTVSQIVSKA 557
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 104 HYGPVCPGCGIFMQDKDPNLPGYY 127
H VCPGCGI MQ DP LPG++
Sbjct: 77 HVNEVCPGCGIAMQSSDPELPGFF 100
>gi|224057138|ref|XP_002299138.1| predicted protein [Populus trichocarpa]
gi|222846396|gb|EEE83943.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/427 (49%), Positives = 292/427 (68%), Gaps = 19/427 (4%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
VCARCHSLR+YG+VK+ ENL+P+FDF + RL+ SG ++V+ DFDG
Sbjct: 167 VVCARCHSLRHYGKVKDPTVENLLPEFDFYHTVGRRLVSSSGARTVVLLVVDAV--DFDG 224
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKK--LPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
FPK+ AK + +EE K K + ++VLV TK+DLLPS +SP ++WVR RA+
Sbjct: 225 SFPKKVAKLVSDSIEENFTAWKEGKSGNVARIVLVVTKIDLLPSSLSPLGFEQWVRRRAR 284
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
GGA + V+LVS+ ++ G++NL + ELAG RG+VW +GAQNAGKSTL+N AK G
Sbjct: 285 EGGASVIKKVHLVSSVRNWGLKNLAEDVIELAGARGHVWAVGAQNAGKSTLLNAMAKCVG 344
Query: 424 ---VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
KVS LTEAP+PGTTLGI+R+ G+LP +AKL+DTPGLL+P ++ RLNR+EQ++V I
Sbjct: 345 GNERKVSYLTEAPVPGTTLGIVRVEGVLPGQAKLFDTPGLLNPQQITTRLNREEQRLVHI 404
Query: 481 RKELQPRTYRVK--------GGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
KEL+PRTYR+K G +VH+GGLMRLD+ + SV+++YV+VWASP + LH+GK
Sbjct: 405 SKELKPRTYRIKVSFLELRPEGHSVHIGGLMRLDIVELSVDSLYVSVWASPYLPLHMGKT 464
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
EN + ++H G +LQPPIG R +LG W ++ +VSG WD + +D+AAAGLGWF +G
Sbjct: 465 ENVSTMVEDHFGRQLQPPIGDKRVKDLGKWVRQEFRVSGNRWDSSSVDVAAAGLGWFGIG 524
Query: 593 LKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDA----LGSKSKLEAKR 648
LKGEA L +WTY+G+ + LR+ L+ RA E GF + K +S A S S+ E KR
Sbjct: 525 LKGEAILGVWTYEGVGVVLRDALIPYRAQSFEVTGFTVSKIVSKADQALNKSLSQSEKKR 584
Query: 649 RKKLEET 655
++ +E
Sbjct: 585 KQSNQEV 591
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 83 NKPRKGSGNTLILSEGRDEDEHYGP--VCPGCGIFMQDKDPNLPGYYKQKKDIERNEEFL 140
N P+ + +L L+ + D+ P VCPGCG+ MQ +P PG+YK+ ++ ++
Sbjct: 62 NPPKHQTFPSLHLTRDGNYDDATPPATVCPGCGVHMQYTNPKHPGFYKEPS--VKDPDYK 119
Query: 141 EDEEGIENDIEG-FEEDIVDGNFDQSDGKESD 171
D + +E F + G F + D + D
Sbjct: 120 SDAHLVPISLESEFPGSLKRGFFVEPDSQNPD 151
>gi|255581678|ref|XP_002531642.1| conserved hypothetical protein [Ricinus communis]
gi|223528727|gb|EEF30738.1| conserved hypothetical protein [Ricinus communis]
Length = 745
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/396 (48%), Positives = 270/396 (68%), Gaps = 14/396 (3%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
VCARCHSLR+YG+VK+ ENL+P+FDFD + RL+ SG + ++V+ DFDG
Sbjct: 323 VCARCHSLRHYGKVKDPTVENLLPEFDFDSTVGKRLVSASGARSVVLLVVDAV--DFDGS 380
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKK--LPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
FPK+ AK + +EE + K K +P++VLV TK+DLLP+ +SPTR + WVR RA+
Sbjct: 381 FPKKVAKLVSSAIEENFNSWKEGKSGNVPRIVLVVTKIDLLPTTLSPTRFEHWVRQRARE 440
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG- 423
GGA + V+ VSA +D G+++L+ + ++AG RGNVW +G QNAGKSTLIN K G
Sbjct: 441 GGASVIKKVHFVSAVRDWGLKDLVDDVIKMAGARGNVWAVGMQNAGKSTLINAMGKWTGG 500
Query: 424 --VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIR 481
K++ LTEAP+PGTTLGI+R+ G+LP +AKL+DTPGLL+PH ++ RL RDEQK+V I
Sbjct: 501 GERKLTHLTEAPVPGTTLGIVRVEGVLPGQAKLFDTPGLLNPHQITTRLTRDEQKLVHIS 560
Query: 482 KELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKN 541
KEL+ RTYR+K V +L D A + ++ P + LH+GK ENA + +
Sbjct: 561 KELKARTYRIK-----IVCVTFQLQHDVA--DNFLGVNFSXPYLPLHMGKTENASTMLAD 613
Query: 542 HVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTL 601
H G +LQPPIG+ R ELG W R+ +SG++WD + +DI+AAGLGW+++GLKGEA + +
Sbjct: 614 HFGHQLQPPIGEKRVEELGRWVRREFSISGSNWDSSSVDISAAGLGWYAIGLKGEAVVGV 673
Query: 602 WTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDA 637
WTY+G+++ LR PL+ R+ E GF + K +S A
Sbjct: 674 WTYEGVDVVLRNPLIPFRSQTFEVAGFTVSKIVSKA 709
>gi|307103636|gb|EFN51894.1| hypothetical protein CHLNCDRAFT_139489 [Chlorella variabilis]
Length = 648
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 207/586 (35%), Positives = 317/586 (54%), Gaps = 76/586 (12%)
Query: 109 CPGCGIFMQDKDPNLPGYYKQKKDIERNEEFLEDEEGIENDIEG--FEEDIVDGNFD--- 163
C GCG+ +Q ++P PG+++ K L ++ E D++G EED + FD
Sbjct: 86 CSGCGVELQQEEPEAPGFFQVPKR-------LLEQLAAEGDLDGAGLEEDDSELVFDDVG 138
Query: 164 --------------------------QSDGKESDSGDGDVFDDWDSDEWEAKFLGEDED- 196
+ +E+ S G D +E EAK+ DE
Sbjct: 139 LEADEAGAEAAAGQEQAGVAGEAAAGPGEVQEAASTSGR-----DPEE-EAKWAAFDEMV 192
Query: 197 DLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRN 256
+ L G PA V + E+ E Q G +CARC SLR+
Sbjct: 193 ESWLGGSKPARVEVASYAEQ-------------------EEGQGTGGSSVLCARCFSLRH 233
Query: 257 YGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLF 316
YG VK+E AE +P FDF+R + ++ + VV+ VVD DFDG P++A +S+
Sbjct: 234 YGSVKSEAAEAELPAFDFERRVGLKIQLQKFRRS--VVLCVVDVADFDGSLPRQALRSIL 291
Query: 317 KK-LEEAKDDAKLSKKLP---KLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNG 372
L++ D + + LP +L++ K DLLP QV+P RL++WVR R G P+ +
Sbjct: 292 PPDLQQGPLD--VGRPLPLGFRLLVAVNKADLLPKQVTPARLEKWVRRRMAQAGLPRPSA 349
Query: 373 VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSK-LTE 431
V++VS+ K GVR LL+ ++ G RG+VWV+GAQNAGKS+LIN + + K +T
Sbjct: 350 VHVVSSTKQRGVRELLSDLQAAVGVRGDVWVVGAQNAGKSSLINAMRQVARLPRDKDVTT 409
Query: 432 APIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRV 491
AP+PGTTLG+LR+ G+LP K+ DTPG+ H H +S L DE +MV R++L+PRT+R+
Sbjct: 410 APLPGTTLGMLRVTGLLPTGCKMLDTPGVPHAHQLSGHLTADEMRMVLPRRQLKPRTFRI 469
Query: 492 KGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPI 551
GQ V +GGL R+D+ + T+Y++V+AS + HLGK E A+E + H G +L PP+
Sbjct: 470 GAGQTVMIGGLARVDVVDSPGATLYLSVFASDEIVCHLGKTETAEERYAMHAGGKLCPPL 529
Query: 552 -GQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEIT 610
G+ R + + ++ G SW + D+A AGLGW +G+ G A+L +W G+ +T
Sbjct: 530 GGEQRMAAFPPLRPTEVTAEGDSWKASSKDVAIAGLGWVGVGVSGTAALRVWAPPGVAVT 589
Query: 611 LREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRRKKLEETE 656
+ LV D A LERPGF + A+++ ++ + EA++ K ++ +
Sbjct: 590 THDALVPDYARDLERPGFGV--ALTEVGKNRREEEARQFKAAKQQQ 633
>gi|384251297|gb|EIE24775.1| hypothetical protein COCSUDRAFT_10321, partial [Coccomyxa
subellipsoidea C-169]
Length = 386
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/385 (42%), Positives = 240/385 (62%), Gaps = 8/385 (2%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
+CARC+SL +YGQVK+ AE +P FD + + ++ VV+ VVD DFDG
Sbjct: 8 VLCARCYSLSHYGQVKSARAEADLPQFDLGQKVGRKIGLT--RHRRAVVLCVVDAADFDG 65
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
P+ A ++LF +E + L K + VL K DLLP+Q + RL++W+R RAK G
Sbjct: 66 SLPRTALQALFSNIEGYQ--VILGKGDVRFVLAVNKADLLPAQATAERLEKWIRMRAKQG 123
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF--AKKEG 423
G PK V LVSA K GV LL + G G+VWV+GAQNAGKS+LIN A + G
Sbjct: 124 GMPKPTSVELVSALKGWGVEQLLVRLHREVGTTGDVWVVGAQNAGKSSLINAMKRAVRHG 183
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
++LT A +PGTTLG+L++ G++P + ++DTPG+ H +S RL+ DE K++ ++
Sbjct: 184 KPRNELTTAALPGTTLGMLKVPGLMPPRCNMFDTPGVPHDFQLSSRLSADEVKLLLPKRR 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+R GQ V VGG+ R+D+ + T+Y+TVWAS +++ H GK E A+E ++ +
Sbjct: 244 LKPRTFRAAAGQTVFVGGVARIDVLTSPGATLYLTVWASDDLTCHFGKTEGAEERYEKSL 303
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP+ Q+ +LG ++ GT+W + DIA AGLGWF++G+ GEA +WT
Sbjct: 304 GTMLVPPLEQEH--KLGPLVPCQVTAQGTNWRQSSTDIAVAGLGWFAVGVSGEAEFNVWT 361
Query: 604 YDGIEITLREPLVLDRAPFLERPGF 628
++G+ IT R ++ D A LERPGF
Sbjct: 362 HEGVAITTRAAVLPDYARDLERPGF 386
>gi|145347663|ref|XP_001418282.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578511|gb|ABO96575.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 604
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 166/419 (39%), Positives = 248/419 (59%), Gaps = 15/419 (3%)
Query: 236 REAQKEKGEVTV-CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
R A+K++G TV CARC +LR G+VKN AE L+P FDF RV+ + +G A VV
Sbjct: 168 RRAKKKRGPPTVVCARCFALRTSGRVKNAAAEVLLPSFDFARVVGDSFERLTGEGRA-VV 226
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
+++VD +DFDG FP A + +E+ D ++LV KVDL+P+Q + TRL
Sbjct: 227 LLMVDLLDFDGSFPVDAIDVIEPYVEKGVVD---------VLLVANKVDLMPTQCTRTRL 277
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
+VR R+K G + GV+LVSA+ +GV L ++++ V+V+GAQNAGKS+L
Sbjct: 278 TSFVRRRSKDFGLSRCAGVHLVSAKAGMGVAILAQQLEDMLDRGKEVYVVGAQNAGKSSL 337
Query: 415 INTFAKK---EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
IN +++ G + +P+PGTTLG++++ +LP + +YDTPGLL P +S RLN
Sbjct: 338 INRLSQRYGGPGEEDGGPIASPLPGTTLGMVKLPALLPNSSDVYDTPGLLQPFQLSSRLN 397
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
DE K+V K + PRTYR++ G +H+GGL R+D+ ++ T+Y+TVWAS V+ H +
Sbjct: 398 GDEMKVVLPNKRVTPRTYRIEVGGTIHIGGLARIDVLESPQRTLYLTVWASNKVATHYAR 457
Query: 532 -IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFS 590
+ AD + H G ++ PPIG+ R + G W R + + G W + DI+ AGL W
Sbjct: 458 TTKGADTFLEKHGGTKMTPPIGEARMRQFGAWGSRVVNIYGEDWQASTRDISIAGLCWIG 517
Query: 591 LGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRR 649
+G G AS +WT++G+++ RE LV D A L PGF D+ + A R+
Sbjct: 518 VGCNGNASFKIWTHEGVQVVTREALVPDMAKSLMSPGFSFENVGGDSSNKRPNDRANRQ 576
>gi|308805346|ref|XP_003079985.1| Predicted GTPases (ISS) [Ostreococcus tauri]
gi|116058442|emb|CAL53631.1| Predicted GTPases (ISS) [Ostreococcus tauri]
Length = 519
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/403 (40%), Positives = 238/403 (59%), Gaps = 14/403 (3%)
Query: 245 VTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFD 304
V VCARC +LR G+VKNE E+L+P FDF+RVI R + N+ VV+++VD +D+D
Sbjct: 94 VIVCARCFALRTSGRVKNEAGESLLPSFDFERVIGDRFNRLR-EKNSAVVLLMVDLIDYD 152
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G FP A + + + K + +++LV KVDL+P+Q + TRL +VR R+K
Sbjct: 153 GSFPVDAVDVI---------EPYVQKGVLEVLLVANKVDLMPAQCTRTRLTSFVRQRSKD 203
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK--- 421
G + +GV+LVSA+ +G+ L ++E+ V+V+GAQNAGKS+LIN + K
Sbjct: 204 FGLSRCSGVHLVSAKAGMGMEILANQLEEMLDRGKEVYVVGAQNAGKSSLINRLSSKYGG 263
Query: 422 EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIR 481
G + +P+PGTTLG++++ +LP + +YDTPGLL P +S RL +E KMV
Sbjct: 264 PGEEDGGPIASPLPGTTLGMVKLASLLPNGSDVYDTPGLLQPFQLSARLTGEEMKMVLPN 323
Query: 482 KELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLG-KIENADEIWK 540
K L PRTYR++ G +H+G L R+DL ++ T+Y+TVWAS V H + AD +
Sbjct: 324 KRLTPRTYRIQVGGTIHIGALARIDLLESPQRTLYLTVWASNKVPTHYSTSAKAADTFLE 383
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H G ++ PP+GQ+R + G W R + V G W + DI+ AGL W +G G AS
Sbjct: 384 KHAGTKMTPPLGQERMQQFGQWGSRLVNVYGEDWQKSTRDISIAGLCWIGVGCNGNASFR 443
Query: 601 LWTYDGIEITLREPLVLDRAPFLERPGFWLPKAISDALGSKSK 643
+WT++G+++ RE LV D L PGF + GS K
Sbjct: 444 VWTHEGVQVVTREALVPDMDKQLMSPGFSFENVGGGSSGSNKK 486
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 106 GPVCPGCGIFMQDKDPNLPGYYKQKKDI 133
G CPGCG+ +QD D N PG+Y K +
Sbjct: 7 GSACPGCGVGLQDVDANAPGFYVTPKKM 34
>gi|412993269|emb|CCO16802.1| predicted protein [Bathycoccus prasinos]
Length = 644
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 205/565 (36%), Positives = 296/565 (52%), Gaps = 69/565 (12%)
Query: 109 CPGCGIFMQDKDPNLPGYYKQKKDIERNEEFLEDEEGIENDIEGFEEDIVDGNFDQSDGK 168
CPGCG +Q D NLPG+Y + ++ E+ EG + D E + ++ + K
Sbjct: 45 CPGCGTALQRADKNLPGFY-----VVPSKLLEEETEGEDVDEEEYMRLMMKEGKKEKKKK 99
Query: 169 ESDSGDGDVFDDWDS---DEWEAKFLGEDE------------DDLDLDGFT--------- 204
++ +DW DE + + E+ DD D + T
Sbjct: 100 KTP-------EDWSQLSPDELARRIMAENSSVHEGGGEEESEDDFDFEDVTFVKDDEIED 152
Query: 205 ---PAGVGYGNITEELVERSKKKK------LSKAERKKKAREAQKEKGEVTVCARCHSLR 255
E+ K+ L A KK R K K VCARC SLR
Sbjct: 153 EDEDGKEAIDAFESLFFEKDDGKEIDEDYELEMAALKKMNR--LKRKPPAIVCARCFSLR 210
Query: 256 NYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSL 315
N G+ KN AE L+P FDF R + T++ + N+ GVV++VVD VDFDG FP A +L
Sbjct: 211 NTGRPKNVNAEILLPSFDFKRSVGTQMERYPNNSKKGVVLVVVDLVDFDGSFPVDAVDAL 270
Query: 316 FKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYL 375
E + +VLV KVDL+P+Q + RL ++VR RAKA G + V L
Sbjct: 271 EPHAERGAIE---------IVLVANKVDLMPAQATRARLTQFVRRRAKAFGMQSASEVLL 321
Query: 376 VSARKDLGVRNLLAFIKELAGPRG-----NVWVIGAQNAGKSTLINTFAKKEGVKVSKLT 430
SA +G+R L ++++ RG +V+V+GAQNAGKS+LIN + + K T
Sbjct: 322 ASATAGMGIRVLSDELEDILRNRGGHKKKDVYVVGAQNAGKSSLINRLSSRYDGPTDK-T 380
Query: 431 EAP----IPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
P +PGTT+G+L++ GILP + +YDTPGLL PH +S R+ DE K++ +K + P
Sbjct: 381 GGPLASHVPGTTIGVLKLEGILPNETDVYDTPGLLQPHQLSARMTADEAKIILPKKRMIP 440
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK--IENADEIWKNHVG 544
RTYR++ G +H+GG+ R+DL A TIYVTVW S +V LH +N DEI+ H G
Sbjct: 441 RTYRIQIGGTIHIGGVSRIDLLDAPQRTIYVTVWCSNDVPLHYTTNGAKNGDEIYAKHAG 500
Query: 545 IRLQPPI-GQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
+L PP+ G++ A LG W RK+ V G SW + DI+ AG+GW ++ G A +WT
Sbjct: 501 TKLTPPLGGEEGALRLGRWGSRKVSVYGDSWSESTRDISIAGVGWVAIACVGNADFKVWT 560
Query: 604 YDGIEITLREPLVLDRAPFLERPGF 628
++G+++ RE LV D + + +PGF
Sbjct: 561 HEGVQLETREALVPDISKSMMKPGF 585
>gi|255081316|ref|XP_002507880.1| predicted protein [Micromonas sp. RCC299]
gi|226523156|gb|ACO69138.1| predicted protein [Micromonas sp. RCC299]
Length = 668
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/393 (44%), Positives = 241/393 (61%), Gaps = 21/393 (5%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRL--MKPSGNANAGVVVMVVDCV 301
E VCARC+SLRNYG+VKNE AE L+P FDF RV+ RL + P G VV+ +VD V
Sbjct: 252 ETVVCARCYSLRNYGKVKNEAAEILMPSFDFGRVVGDRLSRLGPGG----AVVLCLVDLV 307
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DFDG FP A L + D ++LVGTKVDLLP+Q + R+ +VR R
Sbjct: 308 DFDGSFPVDAVDILSPYVANESVD---------VLLVGTKVDLLPTQCTRARVTSFVRRR 358
Query: 362 AKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK 421
AK G + +GV+LVSA +GV L ++ L VWV+GAQNAGKS+LIN +KK
Sbjct: 359 AKDLGLRRASGVHLVSAHSGMGVNILSEQLETLLDEGREVWVVGAQNAGKSSLINRLSKK 418
Query: 422 EGVKVSKLT---EAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMV 478
G + + +PGTTLG++++ G+LP + +YDTPGLL P +S RL +E + V
Sbjct: 419 YGGPGPEDGGPLASHLPGTTLGVVKLPGLLPNGSDVYDTPGLLQPFQVSGRLTAEEARAV 478
Query: 479 EIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHL---GKIENA 535
RK L PRTYR + G +VH+GGL R+D+ T+Y+TVWAS +V H G+ A
Sbjct: 479 LPRKRLAPRTYRAEIGSSVHIGGLARIDVVDGPQRTLYLTVWASHDVPTHYMVKGEGGKA 538
Query: 536 DEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKG 595
D ++ H G +L PP+G++R ++LG W R + V G SW + DI+ GLGW +G+ G
Sbjct: 539 DAFYEKHAGGKLSPPVGENRVAQLGEWGCRTVTVYGESWQRSDRDISIGGLGWVGVGVSG 598
Query: 596 EASLTLWTYDGIEITLREPLVLDRAPFLERPGF 628
AS +WT++G+++ RE LV D + L RPGF
Sbjct: 599 NASFRVWTHEGVQVETREALVPDMSRDLCRPGF 631
>gi|303285748|ref|XP_003062164.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456575|gb|EEH53876.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 527
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 180/464 (38%), Positives = 271/464 (58%), Gaps = 20/464 (4%)
Query: 174 DGDVFDDWDSDEWEAKF---LGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAE 230
DG +DD ++ E A F LGED ++D D A + ++ +R ++ +
Sbjct: 28 DGISYDDDETFELPADFDDGLGEDAIEVDEDAALGALNAMFDDDDDRRDRDDDEEEEEDR 87
Query: 231 RKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNAN 290
R+++ + A+K+ + CARC+SLR++G VKN+ AE L+P FDF RV+ +L K +G
Sbjct: 88 RREERKAARKKNPNLVTCARCYSLRHHGVVKNQAAEILMPSFDFGRVVGNKL-KRTGPGG 146
Query: 291 AGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVS 350
A V++++VD VDFD FP A L D + + ++LV KVDLLP++ +
Sbjct: 147 A-VILLLVDIVDFDASFPIDAVDFL---------DPYVKDETVDVLLVANKVDLLPTRCT 196
Query: 351 PTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
R+ + R RAK+ G K GV+LVSA +G+ L + +L VWV+GAQN G
Sbjct: 197 RARVSSFARRRAKSHGLRKAAGVHLVSAHTGMGINTLSEQLMQLLEDGREVWVVGAQNVG 256
Query: 411 KSTLINTFAKK---EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMS 467
KS+LI +++ G + + +PGTTLG++++ +LP +YDTPGLL P +S
Sbjct: 257 KSSLIVRLSRRFDGPGPEDGGPLASHLPGTTLGVVKLPKLLPNGTDVYDTPGLLQPFQVS 316
Query: 468 MRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSL 527
RL +E +MV R+ L PRTYRV+ G ++H+GGL R+D T+Y+TVW S +V
Sbjct: 317 SRLTGEEARMVLPRRRLSPRTYRVEVGGSIHLGGLARVDYLDGPQRTVYLTVWVSDDVVS 376
Query: 528 HL---GKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAA 584
H G+ AD +++ H G +L PPIG++R +LG W R + V GT W+ + DI+
Sbjct: 377 HYVVRGENGKADALYEKHAGGKLSPPIGENRVKQLGEWGSRTVTVYGTDWNTSTRDISIG 436
Query: 585 GLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERPGF 628
GLGW +G+ GEAS +WT++G+ + RE LV D A L RPGF
Sbjct: 437 GLGWVGVGVNGEASFRVWTHEGVNVETREALVPDMARALHRPGF 480
>gi|159485524|ref|XP_001700794.1| NO synthase-like protein [Chlamydomonas reinhardtii]
gi|158281293|gb|EDP07048.1| NO synthase-like protein [Chlamydomonas reinhardtii]
Length = 733
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/416 (38%), Positives = 237/416 (56%), Gaps = 17/416 (4%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
+C RC SL++ G+VK + AE +PDFD + + ++ VV+ VVD DFDG
Sbjct: 253 VLCQRCFSLKHSGKVKVQAAETALPDFDLGKKVGRKIHL--QKDRRAVVLCVVDMWDFDG 310
Query: 306 MFPKRAAKSLF----KKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
P+ A +SL A +D K S L++ K DLLP Q +P R+ +WVR R
Sbjct: 311 SLPRAALRSLLPPGVTSEAAAPEDLKFS-----LMVAANKFDLLPPQATPARVQQWVRLR 365
Query: 362 AKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK 421
K G P + V+LVSA K GV++++ +++ G RG++WV+GAQNAGKS+LI +
Sbjct: 366 LKQAGLPPPDKVFLVSAAKGTGVKDMVQDVRQALGYRGDLWVVGAQNAGKSSLIAAMKRL 425
Query: 422 EGVK-VSKLTEAPIPGTTLGILRIGGI-LPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
G + T AP+PGTTLG+L++ G+ L K + +DTPG+ H H ++ RL ++ K V
Sbjct: 426 AGTAGKGEPTIAPVPGTTLGLLQVPGLPLGPKHRAFDTPGVPHGHQLTSRLGLEDVKQVL 485
Query: 480 IRKELQPRTYRVKGGQAVHV-GGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEI 538
K L+ RTYR+ G + + GGL RLD+ + T+Y+TV+ S +V+LHLGK E A+E
Sbjct: 486 PSKPLKGRTYRLAPGNTLLIGGGLARLDVVSSPGATLYLTVFVSHHVNLHLGKTEGAEER 545
Query: 539 WKNHV-GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEA 597
V G L PP RA +L ++V GT W + +D+A AGLGW +G G A
Sbjct: 546 LPRLVEGGLLTPPDDPARAEQLPPLVPLDVEVEGTDWRRSTVDVAIAGLGWVGVGCAGRA 605
Query: 598 SLTLWTYDGIEITLREPLVLDRAPFLERPGF--WLPKAISDALGSKSKLEAKRRKK 651
LWT G+ +T L+ D A ERPG LPKA + A + + +A+R ++
Sbjct: 606 GFRLWTLPGVAVTTHAALIPDMAEMFERPGVSSLLPKAQTRAHAAVKEKKAERAER 661
>gi|414885177|tpg|DAA61191.1| TPA: hypothetical protein ZEAMMB73_567116 [Zea mays]
Length = 454
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/395 (38%), Positives = 212/395 (53%), Gaps = 65/395 (16%)
Query: 104 HYGPVCPGCGIFMQDKDPNLPGYYKQKKDIERNEEFLEDEEGIENDIEGFEEDIVDGNFD 163
H VCPGCGI MQ DP ++ GF
Sbjct: 77 HVNEVCPGCGIAMQSSDP---------------------------ELPGFF--------- 100
Query: 164 QSDGKESDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKK 223
+ S + A+ DD + A + G++ E++ +
Sbjct: 101 -------------LLPSAKSPNYRARLAPVTADDTRIS----ASLKSGHLREDI----QP 139
Query: 224 KKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLM 283
K K +G+V VCARCHSLR+YG+VK+ AE L+PDFDF + RL
Sbjct: 140 SGGDKPAAAAAEMAEAKGEGKVLVCARCHSLRHYGRVKHPDAERLLPDFDFVAAVGPRLA 199
Query: 284 KPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK--LSKKLPKLVLVGTK 341
PSG + +V+++ D DFDG FP+ A+ + E + D K LP+ +LV TK
Sbjct: 200 SPSGARS--LVLLLADASDFDGSFPRAVARLVAAAGEAHRADWKHGAPANLPRALLVVTK 257
Query: 342 VDLLPS-QVSPTRLDRWVRHRAKAGGAP--KLNGVYLVSARKDLGVRNLLAFIKELAGPR 398
+DLLP+ +SP + W RA+AG +L GV+LVSA + GVR+LL ++ELAG R
Sbjct: 258 LDLLPTPSLSPDDVHAWAHSRARAGAGADLRLAGVHLVSATRGWGVRDLLEHVRELAGTR 317
Query: 399 GNVWVIGAQNAGKSTLINTFAKKEG-VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
GNVW +GA+N GKSTL+N A+ G V LTEAP+PGTTL ++++ G+L A+AKL+DT
Sbjct: 318 GNVWAVGARNVGKSTLLNAIARCCGIVGRPTLTEAPVPGTTLDVIKLDGVLGAQAKLFDT 377
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVK 492
PGLLH H ++ RL +E K+V++RKE+ PRTYR+K
Sbjct: 378 PGLLHGHQLTSRLTSEEMKLVQVRKEMSPRTYRIK 412
>gi|297609351|ref|NP_001063000.2| Os09g0364500 [Oryza sativa Japonica Group]
gi|255678838|dbj|BAF24914.2| Os09g0364500 [Oryza sativa Japonica Group]
Length = 434
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 178/259 (68%), Gaps = 8/259 (3%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVD 299
K++ +V VCARCHSLR+YG VK AE L+PDFDF + RL PSG + +V+++ D
Sbjct: 163 KKENKVVVCARCHSLRHYGVVKRPEAEPLLPDFDFVAAVGPRLASPSGARS--LVLLLAD 220
Query: 300 CVDFDGMFPKRAAKSLFKKLEEAKDDAK--LSKKLPKLVLVGTKVDLLPS-QVSPTRLDR 356
DFDG FP+ A+ + E D K LP+ +LV TK+DLLP+ +SP +
Sbjct: 221 ASDFDGSFPRAVARLVAAAGEAHGSDWKHGAPANLPRALLVVTKLDLLPTPSLSPDDVHA 280
Query: 357 WV--RHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
W R RA AGG +L GV+LVSA + GVR+LL +++LAG RGNVW +GA+N GKSTL
Sbjct: 281 WAHSRARAGAGGDLRLAGVHLVSAARGWGVRDLLDHVRQLAGSRGNVWAVGARNVGKSTL 340
Query: 415 INTFAKKEGVKVS-KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
+N A+ G++ LTEAP+PGTTL ++++ G+L ++AKL+DTPGLLH H ++ RL R+
Sbjct: 341 LNAIARCSGIEGGPTLTEAPVPGTTLDVIQVDGVLGSQAKLFDTPGLLHGHQLTSRLTRE 400
Query: 474 EQKMVEIRKELQPRTYRVK 492
EQK+V + KE++PRTYR+K
Sbjct: 401 EQKLVRVSKEMRPRTYRLK 419
>gi|302845529|ref|XP_002954303.1| hypothetical protein VOLCADRAFT_118673 [Volvox carteri f.
nagariensis]
gi|300260508|gb|EFJ44727.1| hypothetical protein VOLCADRAFT_118673 [Volvox carteri f.
nagariensis]
Length = 722
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 217/386 (56%), Gaps = 28/386 (7%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC+ L + G++K+ E +P FD + + ++ VV+ VVD DFDG
Sbjct: 343 LCQRCYWLTHAGKLKSYEGEAALPTFDLSKKVGRKIHL--QKDRKAVVLCVVDLWDFDGS 400
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
P++A +L + D+A K KL++ K DLLPS + R+ +WVR R K G
Sbjct: 401 LPRQAISALLPP--GSGDEAPQELKF-KLMVAANKFDLLPSVATVPRVQQWVRTRLKQAG 457
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK- 425
P + V++VSA K LGV+++ I++ G RG++WV+GAQNAGKS+LI + G
Sbjct: 458 LPHADKVFMVSAAKGLGVKDM--DIRQALGFRGDLWVVGAQNAGKSSLIRAMKRLAGTDG 515
Query: 426 VSKLTEAPIPGTTLGILRIGGI-LPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKEL 484
T AP+PGTTLG+L++ GI L K + +DTPG+ H H ++ LN + K
Sbjct: 516 KGDPTVAPVPGTTLGLLQVPGIPLGPKHRTFDTPGVPHTHQLTSHLNPEVVK-------- 567
Query: 485 QPRTYRVKGGQAVHVG-GLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
K G +V +G GL R+D+ A +T+Y+TV+ S +V+LH+GK E AD+ K+
Sbjct: 568 -------KPGHSVLLGAGLARVDVVSAPGQTLYLTVFVSAHVNLHMGKTEGADDKVKSLT 620
Query: 544 --GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTL 601
G+ L PP + + L W+ +++V GT W + +D+A AGLGW +G +G+A L
Sbjct: 621 QNGL-LSPPESPEEVAALPKWQPVEVEVEGTDWSRSTVDVAVAGLGWVGVGCRGKAHLRF 679
Query: 602 WTYDGIEITLREPLVLDRAPFLERPG 627
WT G+ +T L+ D A E+ G
Sbjct: 680 WTLPGVAVTTHAALIPDYAKEFEKKG 705
>gi|397620424|gb|EJK65712.1| hypothetical protein THAOC_13399 [Thalassiosira oceanica]
Length = 613
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 160/572 (27%), Positives = 245/572 (42%), Gaps = 123/572 (21%)
Query: 76 VNSYGKINKPRKGSGNTLILSEGRDEDEHYGPVCPGCGIFMQDKDPNLPGYY-------- 127
N +G PR+ L S CP CG QD D PGY
Sbjct: 99 ANPFGSDETPRRAKFQILTGSM----------TCPACGSDFQDTDEMKPGYLPPDKFETQ 148
Query: 128 ---KQKKDIERNEEFLEDEEGIENDIEGFEEDIVDGNFDQSDGKESDSGDGDVFDDWDSD 184
KQ +DI+R +E ++ E ED VD QS + D
Sbjct: 149 VKLKQIEDIQRQQE-------KDDSDEWSPEDEVDWLLRQSGVEGQD------------- 188
Query: 185 EWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGE 244
D +D+D + +L E +KKK
Sbjct: 189 ---------DSSSIDIDALA------DEMGLDLEELAKKK-------------------- 213
Query: 245 VTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFD 304
+C RCH L+N+G V+ + + + +L+ P N A V++ +VD DF
Sbjct: 214 -VICKRCHGLQNFGTVEKNLRPGWTDEPTLSQEQFRKLLMPLQNKVA-VIIALVDLFDFS 271
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR--- 361
G S+ +L++ D + +L K DLLPS++ R + WVR
Sbjct: 272 G--------SVLPELDKIAGDNPV-------ILAANKADLLPSEMGHVRAENWVRRELEY 316
Query: 362 ------AKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPR-GNVWVIGAQNAGKSTL 414
A GGA V LVS + G+ L+ + LA + +++V+GA NAGKS
Sbjct: 317 LDVNSIANIGGA-----VRLVSCKTGYGISALMEKAQSLAEEKECDIYVVGAANAGKS-- 369
Query: 415 INTFAKKEGVKVS--------KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
+ +KK G + +T +P+PGTTL +++ L LYDTPGLL P +
Sbjct: 370 YDGASKKNGKMRAGNANKWKGSVTTSPLPGTTLQFIKVD--LSGGKVLYDTPGLLVPGCL 427
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ RL +E K+V +K ++P T+R++ G+ VGGL R++L + T + + +
Sbjct: 428 TERLTPEELKIVVPKKRVEPVTFRIQAGKCALVGGLARVEL-IGDCKPFLFTFFVANEIK 486
Query: 527 LHLGKIENADEIWKNHVGIRLQPPI--GQDRASELGTWKDRKLKVSGTSWDVNGIDIAAA 584
LHL AD+ +HVG L PP+ GQ R E+G ++ +++V G W DI
Sbjct: 487 LHLTSSLKADDFISSHVGKLLTPPLEPGQARLEEIGEFEYHEIEVQGEGWKQAAADITLR 546
Query: 585 GLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GLGW ++ G A + + GI ++LR PL+
Sbjct: 547 GLGWVAVTGAGRAKVRIGVPKGIGVSLRPPLM 578
>gi|219127817|ref|XP_002184124.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404355|gb|EEC44302.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 710
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 202/399 (50%), Gaps = 50/399 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEV-----AENLIPDFDFDRVIATRLMKPSGNANAGVVVMVV 298
++ +C RCH L+N+G+V++ + E L+ F ++ KP+ V+V +V
Sbjct: 309 KMVICKRCHGLQNFGKVQDSLRPGWTKEPLLSQEKFRELLRPIKEKPA------VIVALV 362
Query: 299 DCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWV 358
D DF G S+ +L+E ++ + P ++L K DLLPS++ R + WV
Sbjct: 363 DLFDFSG--------SVLPELDE------IAGENP-VILAANKADLLPSEMGRVRAESWV 407
Query: 359 RHRAKAGGAPKLNG----VYLVSARKDLGVRNLLAFIKELAGP-RGNVWVIGAQNAGKST 413
R + G L G V LVS + G+ +LL + LA G+++V+GA NAGKST
Sbjct: 408 RRELEYLGVKSLAGMRGAVRLVSCKTGAGINDLLEKARGLAEEIDGDIYVVGAANAGKST 467
Query: 414 LINTFAKKEGVKVS--------------KLTEAPIPGTTLGILRIGGILPAKAKLYDTPG 459
L+N ++ V S +T +P+PGTTL +++ L LYDTPG
Sbjct: 468 LLNFVLGQDKVNRSPGKARAGNRNAFKGAVTTSPLPGTTLKFIKVD--LGGGRSLYDTPG 525
Query: 460 LLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTV 519
LL ++ L +E K+V +K ++P T R+ G+ V VGGL R++L S ++ T
Sbjct: 526 LLVLGTVTQLLTPEELKIVVPKKPIEPVTLRLSTGKCVLVGGLARIELIGDSRPFMF-TF 584
Query: 520 WASPNVSLHLGKIENADEIWKNHVGIRLQPPI--GQDRASELGTWKDRKLKVSGTSWDVN 577
+ + + LH IE ADE H G L PP+ G R E+G ++D + + G W
Sbjct: 585 FVANEIKLHPTDIERADEFVLKHAGGMLTPPLAPGPKRMEEIGEFEDHIVDIQGAGWKEA 644
Query: 578 GIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
DI+ GLGW ++ G A + + GI +++R PL+
Sbjct: 645 AADISLTGLGWVAVTGAGTAQVKISVPKGIGVSVRPPLM 683
>gi|433462862|ref|ZP_20420433.1| GTPase YqeH [Halobacillus sp. BAB-2008]
gi|432188318|gb|ELK45522.1| GTPase YqeH [Halobacillus sp. BAB-2008]
Length = 366
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 197/374 (52%), Gaps = 40/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NEV + D DF M +A G++V +VD DF
Sbjct: 32 EDIICKRCFRLKHY----NEVQDVPYQDDDFLE------MLNQISATDGLIVQLVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + L+ P L LVG K+D+LP V+ ++ W++ A+
Sbjct: 82 NGSFIPGLKR--------------LTGNNPVL-LVGNKMDVLPKSVNHGKVKHWLKRSAR 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF-AKKE 422
G ++ VYL+SA K+ G+ L A I G+V+V+G N GKST INT +
Sbjct: 127 ENGL-EVEDVYLISAEKNEGIETLSAAIDRYRN-GGDVYVVGTTNVGKSTFINTLISNTS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
GVK +T + PGTTLG + I L + LYDTPG++H H M+ ++ + K++ RK
Sbjct: 185 GVK-DAITTSYFPGTTLGFIDIP--LDNDSSLYDTPGVIHRHQMAHYVSDKDLKLITPRK 241
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P+ Y++ Q + +GGL RLD + S + + S +S+H K+E AD++++NH
Sbjct: 242 EVKPKVYQLNEEQTLFIGGLARLDFEAGSRSSF--ICYVSNELSIHRTKLEKADDLYQNH 299
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
+G L PP + +L K LK+ + DI +GLGW ++ +G ++ +
Sbjct: 300 LGELLSPPDAATK-EKLPPLKGHTLKIKE-----DKTDIVFSGLGWITVP-EGGVTVQAY 352
Query: 603 TYDGIEITLREPLV 616
+G++++LRE L+
Sbjct: 353 APEGVKVSLRESLI 366
>gi|311031591|ref|ZP_07709681.1| GTP-binding protein YqeH [Bacillus sp. m3-13]
Length = 367
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 188/373 (50%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ S G+VV +VD DF
Sbjct: 33 EAVICKRCFRLKHY----NEIQDVSLTDDDFIRILN------SIGQTQGLVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
DG + + + K++LVG KVDLLP V P ++ W++ AK
Sbjct: 83 DGSWLPGLHRFVGNN---------------KVLLVGNKVDLLPKSVKPNKVINWMKQAAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K GV+ L I++ + +V+V+G N GKST IN ++
Sbjct: 128 ELGL-KPEDVFLISADKGTGVKELAQAIEDYRDGK-DVYVVGCTNVGKSTFINRIIREFS 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L A L+DTPG+++ H M+ +++ E K++ +KE
Sbjct: 186 GEEDVITTSQFPGTTLDMIDIP--LDNGASLFDTPGIINRHQMAHFIDKTELKVISPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P+ +++ GQ + GGL R D + + T + S ++ +H K+ENAD ++K H+
Sbjct: 244 IKPKIFQLNEGQTLFFGGLARFDYVKGGRNSF--TCYVSNDLYIHRTKLENADNVYKEHL 301
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G LQPP GQD + + DI +GLGW ++ G +
Sbjct: 302 GDLLQPP-GQDVVESFPELVAHEFTIKEEK-----TDIVFSGLGWVTINEPG-IKVVAHV 354
Query: 604 YDGIEITLREPLV 616
G+ + +R+ L+
Sbjct: 355 PKGVGVMVRKSLI 367
>gi|440803475|gb|ELR24376.1| ribosome biogenesis GTPase YqeH, putative [Acanthamoeba castellanii
str. Neff]
Length = 578
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 206/413 (49%), Gaps = 69/413 (16%)
Query: 239 QKEKGEVTVCARCHSLRNYGQVK------NEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
Q+E+G VC RCHSLR++G V EV E+L ++I+ + +
Sbjct: 36 QEERGLAPVCQRCHSLRHHGIVTPLKVPYEEVKEHL-------KLISDQ---------SC 79
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV +VD DF G F D ++ P +VLVG K+DLLP P
Sbjct: 80 LVVKIVDIFDFSGSF--------------INDFRGITGNNP-VVLVGNKLDLLPVGAKPE 124
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
R+ W++ A G + V+L+SA+ GV +L I++L R +V+V+G N GKS
Sbjct: 125 RIQIWLKRLATEMGLKNVRSVHLISAKSGEGVHSLSRKIEQLRKER-DVYVVGCTNVGKS 183
Query: 413 TLIN--------------TFAKKEGVKVSKL-TEAPIPGTTLGILR--IGGI----LPAK 451
TLIN T +G K L T + +PGTTL ++ +GG + +
Sbjct: 184 TLINRLISINTKGTYNSLTVHIVQGPKKRNLITTSIVPGTTLNLISFPLGGKKAFKMGKR 243
Query: 452 AKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQAS 511
A LYDTPG+++ H M+ LN +E + ++ +QP TYR+ G+A+ GGL RLD
Sbjct: 244 AFLYDTPGVINKHQMANLLNMEELSITLPKRRIQPVTYRLVPGKALFFGGLGRLDYVDGP 303
Query: 512 VETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSG 571
+Y+T++ S + +H I AD++ H G L PP+G++RA +L + + + +
Sbjct: 304 -GPLYLTLFLSKELKVHPTSIAKADDVMSKHAGTLLVPPLGEERAKQLPEFIAKDIHIEA 362
Query: 572 TSWDVNGI-----DIAAAGLGWFSL---GLKGEASLTLWTYDGIEITLREPLV 616
+ G+ DI +GLGW SL + L + +G+ I LREPL+
Sbjct: 363 DE-ERGGLKKSFADIVFSGLGWTSLVTPTFDRDIHLRSLSPEGVGIFLREPLM 414
>gi|410460447|ref|ZP_11314125.1| GTPase YqeH [Bacillus azotoformans LMG 9581]
gi|409927062|gb|EKN64208.1| GTPase YqeH [Bacillus azotoformans LMG 9581]
Length = 369
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/375 (32%), Positives = 194/375 (51%), Gaps = 41/375 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
EV +C RC L++Y NE+ + + D DF +++ G+++A +VV +VD DF
Sbjct: 34 EVLICQRCFRLKHY----NEIQDVSLTDDDF-----LKILNGIGDSDA-LVVKIVDIFDF 83
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA- 362
+G + + + K K++LVG KVDLLP V ++L W+++ A
Sbjct: 84 NGSWLPGLHRFVGKN---------------KVLLVGNKVDLLPKSVKNSKLIHWMKYSAS 128
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK- 421
+ G PK VYL+SA K GV+ L A I + NV+V+G N GKST IN K+
Sbjct: 129 QLGLKPK--DVYLISAAKGEGVQELAAAI-DFHREGKNVYVVGCTNVGKSTFINKIIKEF 185
Query: 422 EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIR 481
GV +T + PGTTL ++ I L L+DTPG+++ H M+ +N KM+ R
Sbjct: 186 SGVTDDVITTSQFPGTTLDLIDIP--LDDGTSLFDTPGIINHHQMAHFVNEKGLKMISPR 243
Query: 482 KELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKN 541
KE++PR +++ GQ ++ GGL R D ++ T + S +++H K+E AD+++++
Sbjct: 244 KEIKPRVFQLNEGQTLYFGGLARFDYISGGRKSF--TCYVSNELNIHRTKLEKADKLYED 301
Query: 542 HVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTL 601
HVG L PP ++ E ++ + DI GLGW + G A +
Sbjct: 302 HVGELLFPPF-EEEVKEFPPLVKQEFMIREAK-----TDIVFHGLGWVTCNEPG-AKIVA 354
Query: 602 WTYDGIEITLREPLV 616
G+ +T+R+ L+
Sbjct: 355 HVPKGVGVTIRQSLI 369
>gi|398818043|ref|ZP_10576642.1| ribosome biogenesis GTPase YqeH [Brevibacillus sp. BC25]
gi|398028841|gb|EJL22344.1| ribosome biogenesis GTPase YqeH [Brevibacillus sp. BC25]
Length = 373
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 201/392 (51%), Gaps = 35/392 (8%)
Query: 226 LSKAERKKKAREAQKEKG-EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMK 284
+ A+ KK + G +V +C RC+ +++Y NEVA + D DF +++
Sbjct: 16 IQTADAKKPGYAPESALGRKVVICQRCYRIKHY----NEVAPVGMGDDDF-----LKILD 66
Query: 285 PSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDL 344
G+ A +VVMVVD DF G + K + + K ++LVG KVDL
Sbjct: 67 GIGSTQA-LVVMVVDIFDFQGSWLKGLPRFVGKN---------------PILLVGNKVDL 110
Query: 345 LPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVI 404
LP ++ R+ W++H AK G + V L+SA+K L + LL I EL R +V+++
Sbjct: 111 LPKNINLNRVRNWMQHEAKERGL-RPEDVVLISAQKGLHIDELLNRIGELRKGR-DVYIV 168
Query: 405 GAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPH 464
G N GKST+IN G ++T +P PGTTL + I L ++DTPG+++
Sbjct: 169 GVTNVGKSTMINRILHDYGAAELEITTSPFPGTTLDKIEIP--LEDGRSIFDTPGIINRD 226
Query: 465 LMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPN 524
+ ++ + + + + + Y++ GQ++ +GGL R+D + + + V+A +
Sbjct: 227 QIGHMVSPTDLRKITPTSRINSKVYQLDDGQSLFLGGLARIDFVRGERQPL--IVYADND 284
Query: 525 VSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAA 584
+ +H K+E ADE+ + H G L PP G++ A L + K++ ++ DI +
Sbjct: 285 LYIHRTKLEKADEVMEKHHGTLLVPPTGEEAAKALPPFVKHTFKINKSTMTT---DIVIS 341
Query: 585 GLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GLGW S+ K EAS+ + G+ + +R+ L+
Sbjct: 342 GLGWVSIQGKHEASVVVHAPKGVSVGMRKGLI 373
>gi|452822685|gb|EME29702.1| GTP-binding protein [Galdieria sulphuraria]
Length = 547
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 200/411 (48%), Gaps = 58/411 (14%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPD-FDFDRVIATRLMKP---SGNANAGVVVMVVDCVD 302
VC RC+ + + V++++ D + D + + +L + + + ++V +VD D
Sbjct: 137 VCQRCYYMVHRTLVEDQLKIGATEDSTNKDILHSLKLFEQRLENICSKRCIIVYMVDIFD 196
Query: 303 FDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA 362
FDG F R ++ P ++L+ K+DLLP ++ RL W++++
Sbjct: 197 FDGSFVSRLPF--------------ITGNNP-VILIVNKIDLLPKDINIGRLYVWLKNQC 241
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLA-FIKELAGPRGNVWVIGAQNAGKSTLIN----- 416
+A G K++ ++ VS KD + A I+ + +V+V+G N GKST IN
Sbjct: 242 EARGLTKIHRIHFVSCTKDYRMGETKADIIRLVQYLNADVYVVGCTNVGKSTFINRLLSN 301
Query: 417 TFAKKEGVKV-------------------------SKLTEAPIPGTTLGILRIGGILPAK 451
T KK G ++ +LT + PGTTL +RI
Sbjct: 302 TVEKKTGQELLNYLGLKQGQFSLTELKRAFKDKKDPQLTTSCFPGTTLNPIRIH--FGRS 359
Query: 452 AKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQAS 511
+YDTPG++ PH ++ L +E KMV +K ++ ++R+ G+ +H GGL RL++ Q
Sbjct: 360 HSMYDTPGIIQPHQITHLLTSEEIKMVLPKKRVRVVSFRLMEGKCIHFGGLARLEMLQG- 418
Query: 512 VETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSG 571
+ + TV+ S V +H A+E+ + HVG LQPPI + ELG +K ++ +V G
Sbjct: 419 -KPFFFTVFMSNEVKVHPSTTAKAEELLETHVGGLLQPPISWRKYKELGNFKAKEFEVDG 477
Query: 572 TSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPF 622
W + DI +GLGW ++ G + + G+ + LREP+ APF
Sbjct: 478 VGWLQSSHDIVISGLGWVAVTGCGRLKVRVVAPKGVGVFLREPI----APF 524
>gi|259503609|ref|ZP_05746511.1| GTP-binding protein [Lactobacillus antri DSM 16041]
gi|259168433|gb|EEW52928.1| GTP-binding protein [Lactobacillus antri DSM 16041]
Length = 372
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 190/369 (51%), Gaps = 40/369 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+A + D DF RL+ +ANA ++V VVD DF+G
Sbjct: 44 CQRCFRLRHY----NEIAPVSLTDDDF-----LRLLGQIRDANA-LIVYVVDIFDFNG-- 91
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
SL L D + +LVG K DLLP + +L W+R +A G
Sbjct: 92 ------SLIPGLHRFVGDNPV-------LLVGNKEDLLPRSLRRPKLCDWIRQQANQAGI 138
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
++ V LVSA+K+ + LLA I++ R +V+V+G N GKSTLIN K+
Sbjct: 139 RPVDTV-LVSAKKNHEIDELLATIEKYRHDR-DVYVVGVTNVGKSTLINQIIKQRTGVQD 196
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL + I L +L DTPG++HPH M+ L+ + K+V +KE++PR
Sbjct: 197 LITTSRFPGTTLDEIEIP--LDDGHRLVDTPGIIHPHQMAHVLSAKDLKIVAPQKEIKPR 254
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ GQ V +GG+ R D ++ + +VT + + N++LH K+ NAD ++ H G L
Sbjct: 255 TYQLDPGQTVFIGGVARFDFEKGP-HSGFVTYFDN-NLTLHRTKLVNADRFYEKHRGGLL 312
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
PP D + + +V+ S DI GLGW + + + ++ W G+
Sbjct: 313 TPPTA-DELAAFPPLVREEFRVTEKS------DIVFEGLGWVT--VPADVTVAAWVPKGV 363
Query: 608 EITLREPLV 616
+R+ ++
Sbjct: 364 AALVRKAMI 372
>gi|392531382|ref|ZP_10278519.1| GTPase YqeH [Carnobacterium maltaromaticum ATCC 35586]
Length = 377
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 192/386 (49%), Gaps = 48/386 (12%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A E E GEV C RC LR+Y NE+ + + D DF RL+ G +A ++
Sbjct: 36 ALEKGLENGEV-YCQRCFRLRHY----NEIQDVQLTDDDF-----LRLLNEIGAEDA-LI 84
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
V V+D DF+G SL L + P L LVG KVDLLP + ++
Sbjct: 85 VNVIDIFDFNG--------SLIPGLH------RFVGNNPVL-LVGNKVDLLPHSLKRGKM 129
Query: 355 DRWVRHRAKAGGA-PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
+W+R RA G PK V L SA K + +LL I++ R +V+V+G N GKST
Sbjct: 130 TQWLRERAHEEGLRPK--DVILTSAMKPKEMDDLLKTIEKYREGR-DVFVVGVTNVGKST 186
Query: 414 LINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
LIN K +T + PGTTL RI L L DTPG++H H M+ L
Sbjct: 187 LINQIIKNTAGVADVITTSQFPGTTLD--RIEIPLDDGKSLIDTPGIIHRHQMAHVLGDK 244
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIE 533
+ K++ +KE++P Y++ GQ + GG+ R D Q + T + S ++ +H K+E
Sbjct: 245 DLKLIAPKKEIKPMVYQLNEGQTLFFGGVARFDYIQGGRRSF--TCYTSNDLKIHRTKLE 302
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDR---KLKVSGTSWDVNGIDIAAAGLGWFS 590
ADE++ NHVG LQPP R E+G + + + V S DI AGLGW +
Sbjct: 303 KADELYANHVGEMLQPP----RKDEVGNFPELVRFEFSVKERS------DIVFAGLGWVT 352
Query: 591 LGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W G+++ +R+ L+
Sbjct: 353 VNEPG-AVVAGWAPKGVDVVIRKSLI 377
>gi|317495823|ref|ZP_07954186.1| ribosome biogenesis GTPase YqeH [Gemella morbillorum M424]
gi|316914000|gb|EFV35483.1| ribosome biogenesis GTPase YqeH [Gemella morbillorum M424]
Length = 373
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 191/370 (51%), Gaps = 36/370 (9%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
VC RC L+NY NEV++ + DF ++I T K G++V VVD DF G
Sbjct: 40 VCKRCFRLKNY----NEVSDVELGAEDFYKLIKTLSKKD------GLIVKVVDIFDFSGS 89
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
+ +E+ D +K + VLV K+DLLP V ++ +W+ KA G
Sbjct: 90 W-----------IEDVIDIVGNNKDI---VLVANKLDLLPKSVKQNKIKQWLFKMLKAKG 135
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
K+ V L+SA K+ G+ A I EL + +V++IGA N GKST IN +
Sbjct: 136 I-KVKDVLLISAIKNHGIEEAAARIDELRNGK-DVYIIGATNVGKSTFINKLIELTTGDK 193
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+ +T + PGTTLG++ I L +YDTPG++ + ++ L+ K+V +KE++
Sbjct: 194 NVITTSHFPGTTLGMIEIP--LDRATSIYDTPGIILDYDIAHYLDAKSLKLVMPKKEIKA 251
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
R +++ Q++ GG+ R+D + ++ T++AS V +H K+ NAD +++ H+G
Sbjct: 252 RVFQLNAEQSLFFGGMARVDFVKGERQSF--TLYASNLVDIHRTKLSNADALFEKHLGTL 309
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L+PP +D S + K+ D IDI +GLGW ++ + ++ +
Sbjct: 310 LKPPF-EDNISIFKNQVKKNFKI-----DDRKIDIVISGLGWITVNSDSGCEIDIYVPEE 363
Query: 607 IEITLREPLV 616
IE+ +RE ++
Sbjct: 364 IEVFVRESII 373
>gi|392957245|ref|ZP_10322769.1| GTPase YqeH [Bacillus macauensis ZFHKF-1]
gi|391876652|gb|EIT85248.1| GTPase YqeH [Bacillus macauensis ZFHKF-1]
Length = 366
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 197/376 (52%), Gaps = 41/376 (10%)
Query: 242 KGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCV 301
K E +C RC L++Y NE+ + + D D+ ++++ S +VV +VD
Sbjct: 31 KKEAVICQRCFRLKHY----NEIQDVNLTDDDYRKILS------SIGDTQSLVVKIVDIF 80
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DF+G + + + K KL+LVG KVDLLP V+ RL +W+
Sbjct: 81 DFNGSWLPGIHRYIGKN---------------KLMLVGNKVDLLPKSVNKNRLKQWMATM 125
Query: 362 AKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK 421
AK G K V+LVS+ K G++ + I EL + +V+V+G N GKST IN K+
Sbjct: 126 AKEYGV-KAEEVHLVSSAKGTGLQEVAEQIDELREGK-DVYVVGCTNVGKSTFINGLIKQ 183
Query: 422 EGVKVSKL-TEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
G + + T + PGTTL ++ I L + L+DTPG+++ H M+ +++DE K++
Sbjct: 184 LGTEQQDIITTSYFPGTTLNLIDIP--LDEETALFDTPGIINHHQMAHFVSKDELKIIMP 241
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P Y++ Q++ +GGL R D + + + S ++++H K+E AD++++
Sbjct: 242 KKEIKPLVYQLNEEQSLFLGGLARFDYIKGGRRSFVCHI--SNDLNIHRTKLERADDLYE 299
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H+G L PP QDR +L K + + DI +GLGW S+ G A +
Sbjct: 300 KHLGELLTPP--QDR-EKLPPLKRYEFMIKEKD-----TDIVFSGLGWISVKEAG-AKVA 350
Query: 601 LWTYDGIEITLREPLV 616
+ +G+ +TLR L+
Sbjct: 351 AYAPEGVAVTLRPSLI 366
>gi|366052989|ref|ZP_09450711.1| GTPase YqeH [Lactobacillus suebicus KCTC 3549]
Length = 374
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 186/369 (50%), Gaps = 40/369 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+A + D DF RL+ +ANA ++V VVD DF+G
Sbjct: 46 CQRCFRLRHY----NEIAPVSLTDDDF-----LRLLNQIRDANA-LIVYVVDIFDFNG-- 93
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
S+ L D + +LVG K DLLP + T+L W+R + A G
Sbjct: 94 ------SIIPGLHRFVGDNPV-------LLVGNKEDLLPRSLRRTKLTDWMRQQTNANGI 140
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
++ V LVSA+K+ + +LL I++ G R +V+V+G N GKSTLIN ++
Sbjct: 141 RPVD-VTLVSAKKNHQISSLLELIEKHRGKR-DVYVVGVTNVGKSTLINQIIRQTTGVQE 198
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL + I L +L DTPG++HP M+ L D K V +KE++PR
Sbjct: 199 LITTSRFPGTTLDKIEIP--LDDGKQLVDTPGIIHPDQMAHVLPADALKYVAPQKEIKPR 256
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
T+++ Q + +GG+ R D + I + N++LH K+ENAD + HVG L
Sbjct: 257 TFQLNEQQTIFLGGVARFDYVRGDRNGI--VAYFDNNLNLHRTKLENADAFYDKHVGGLL 314
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
PP G++ ++ + + + S D+ GLGW + + G ++ W G+
Sbjct: 315 TPP-GENELNDFPELERHEFHLEQKS------DLVIEGLGWIT--VPGNTTIAGWAPKGV 365
Query: 608 EITLREPLV 616
+ +R ++
Sbjct: 366 SVIVRRAMI 374
>gi|386714891|ref|YP_006181214.1| GTPase family protein [Halobacillus halophilus DSM 2266]
gi|384074447|emb|CCG45940.1| GTPase familiy protein [Halobacillus halophilus DSM 2266]
Length = 366
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 197/374 (52%), Gaps = 40/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y +V++ +P ++ D + M + G+++ +VD DF
Sbjct: 32 EDVICKRCFRLKHYNEVQD------VP-YNADDFLE---MLHQISDTKGLIIQLVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F +L+ P ++LVG K+D+LP V+ ++ W++ AK
Sbjct: 82 NGSF--------------ISGLKRLTGNNP-VILVGNKMDVLPKSVNHEKVKHWLKRSAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V+L+SA K+ G+ L + G+V+V+G N GKST INT
Sbjct: 127 EQGL-IVEDVFLISAEKNQGITELSKAMDHYR-KGGDVYVVGTTNVGKSTFINTLISNTS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTLG + I L + L+DTPG++ H M+ ++ + K++ R+E
Sbjct: 185 GEKDAITTSYFPGTTLGFIDIP--LDENSSLFDTPGVIQRHQMAHYVSEQDLKVITPRRE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P+ Y++ Q ++ GGL RLD + S T +V + S +++H K+E AD++++NH+
Sbjct: 243 VKPKIYQLNEAQTLYFGGLARLDFESGS-RTSFV-CYFSNEINIHRTKLEKADDLYQNHL 300
Query: 544 GIRLQPPIGQDRASE-LGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP R E L K + ++ + DI +GLGW ++ +G ++T+
Sbjct: 301 GELLVPP--DSRTMEKLPPLKKQTFRIKE-----DKTDIVFSGLGWITVP-EGHINVTVH 352
Query: 603 TYDGIEITLREPLV 616
+G++++LRE L+
Sbjct: 353 VPEGVKVSLRESLI 366
>gi|226311575|ref|YP_002771469.1| GTP-binding protein YqeH [Brevibacillus brevis NBRC 100599]
gi|226094523|dbj|BAH42965.1| GTP binding protein [Brevibacillus brevis NBRC 100599]
Length = 373
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 197/392 (50%), Gaps = 35/392 (8%)
Query: 226 LSKAERKKKAREAQKEKG-EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMK 284
+ A+ KK + G +V +C RC+ +++Y NEVA + D DF +++
Sbjct: 16 IQTADAKKPGYAPESALGRKVIICQRCYRIKHY----NEVAPVGMGDDDFLKILD----- 66
Query: 285 PSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDL 344
+ +VVMVVD DF G + K + + K ++LVG KVDL
Sbjct: 67 -GIGSTESLVVMVVDIFDFQGSWLKGLPRFVGKN---------------PILLVGNKVDL 110
Query: 345 LPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVI 404
LP ++ R+ W++H AK G + V L+SA+K L + LL I EL R +V+++
Sbjct: 111 LPRNINLNRVRNWMQHEAKERGL-RPEDVVLISAQKGLHIDELLNRIGELRKGR-DVYIV 168
Query: 405 GAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPH 464
G N GKST+IN G ++T +P PGTTL + I L ++DTPG+++
Sbjct: 169 GVTNVGKSTMINRILHDYGAAELEITTSPFPGTTLDKIEIP--LEDGRSIFDTPGIINRD 226
Query: 465 LMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPN 524
+ ++ + + + + + Y++ GQ++ +GGL R+D + + V+ +
Sbjct: 227 QIGHMVSPTDLRKITPTSRINSKVYQLDDGQSLFLGGLARIDFVRGERQPF--IVYVDND 284
Query: 525 VSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAA 584
+ +H K+E ADE+ + H G L PP G++ A L + K++ ++ DI +
Sbjct: 285 LYIHRTKLEKADEVMQKHHGTLLVPPTGEEAAKALPPFVKHTFKINKSTMTT---DIVIS 341
Query: 585 GLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GLGW S+ K EAS+ + G+ + +R+ L+
Sbjct: 342 GLGWVSIQGKHEASVVVHAPKGVSVGMRKGLI 373
>gi|352517436|ref|YP_004886753.1| putative GTP-binding protein [Tetragenococcus halophilus NBRC
12172]
gi|348601543|dbj|BAK94589.1| putative GTP-binding protein [Tetragenococcus halophilus NBRC
12172]
Length = 369
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 193/384 (50%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K E E GEV C RC LR+Y NE+ + + D DF RL+ G +A
Sbjct: 27 KSVLEKGMESGEV-YCQRCFRLRHY----NEIQDVSLTDDDF-----LRLLNEIGQKDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G S+ L D + +LVG KVD+LP + T
Sbjct: 76 LIVNVVDIFDFNG--------SIIPGLHRFVGDNPV-------LLVGNKVDVLPKSLKKT 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L +W++ +A G ++ V L SA+++ + LL I++ R +V+++G N GKS
Sbjct: 121 KLKQWMKEQAHDKGLRPVD-VLLTSAKRNDELDALLDMIEKYREGR-DVYIVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN +K +T + PGTTL + I L L DTPG++H H M+ L
Sbjct: 179 TLINQIVQKTADVKELITTSKFPGTTLDKIEIP--LEDGQFLIDTPGIIHRHQMAHFLGE 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ GQ + +GGL R D + E TV+ S ++ +H K+
Sbjct: 237 KDLKIIAPQKEIKPKIYQLNAGQTLFLGGLARFDFVKG--EKSSFTVFVSNDLMIHRTKL 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
ENAD+ ++ H+G LQPP D + + + + DI AGLGW +
Sbjct: 295 ENADKFYEKHLGELLQPP-RNDEKEHFPELERFEFSIKEKT------DIVFAGLGWVT-- 345
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+K ++ W G+++ R+ LV
Sbjct: 346 VKDPVVVSGWAPKGVDVITRQALV 369
>gi|373859118|ref|ZP_09601850.1| ribosome biogenesis GTPase YqeH [Bacillus sp. 1NLA3E]
gi|372451209|gb|EHP24688.1| ribosome biogenesis GTPase YqeH [Bacillus sp. 1NLA3E]
Length = 367
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 189/375 (50%), Gaps = 42/375 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NEV + + D DF +++ G +A ++V +VD DF
Sbjct: 33 ETIICQRCFRLKNY----NEVQDVHLTDDDF-----LKILNEIGTKDA-LIVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L + K+ +L+G KVDLLP V P +L W++H AK
Sbjct: 83 NG--------SWLPGLHRFVGNNKI-------LLIGNKVDLLPKSVKPAKLIHWMKHEAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+LVSA + ++ +A I++ + +V+V+G N GKST IN K+
Sbjct: 128 EQGL-KPEDVFLVSAARGQFIQEAVAAIEKHRDGK-DVYVVGCTNVGKSTFINRVIKEFS 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+T + PGTTL I+ I L L DTPG+++ H M+ +++ + K + +KE
Sbjct: 186 GGEDVITTSHFPGTTLDIIEIP--LSDGKALIDTPGIINHHQMAHFIDKRDLKFITPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P+ Y+V GQ + GGL R D + + S + +H KIE ADE+++NHV
Sbjct: 244 IKPKIYQVNEGQTLFFGGLARFDYLSGGRRSF--VCYISNELGIHRTKIEKADELYQNHV 301
Query: 544 GIRLQPPI--GQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTL 601
G L PP G D EL + +K T D+ +GLGW ++ G A +
Sbjct: 302 GEMLTPPRKEGLDEFPEL-VRHEFMIKEGKT-------DVVFSGLGWVTINDPG-AKVAA 352
Query: 602 WTYDGIEITLREPLV 616
+ G+++ +R+ L+
Sbjct: 353 YVPKGVQVMIRKSLI 367
>gi|312868748|ref|ZP_07728940.1| ribosome biogenesis GTPase YqeH [Lactobacillus oris PB013-T2-3]
gi|311095734|gb|EFQ53986.1| ribosome biogenesis GTPase YqeH [Lactobacillus oris PB013-T2-3]
Length = 372
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 189/369 (51%), Gaps = 40/369 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+A + D DF RL+ +ANA ++V VVD DF+G
Sbjct: 44 CQRCFRLRHY----NEIAPVSLTDDDF-----LRLLGQIRDANA-LIVYVVDIFDFNG-- 91
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
SL L D + +LVG K DLLP + +L W+R +A G
Sbjct: 92 ------SLIPGLHRFVGDNPV-------LLVGNKEDLLPRSLRRPKLCDWIRQQANQAGI 138
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
++ V LVSA+K+ + LLA I++ R +V+V+G N GKSTLIN K+
Sbjct: 139 RPVDTV-LVSAKKNHEIDELLATIEKYRHDR-DVYVVGVTNVGKSTLINQIIKQRTGVQD 196
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL + I L KL DTPG++HPH M+ L+ + K+V +KE++PR
Sbjct: 197 LITTSRFPGTTLDEIEIP--LDDGHKLVDTPGIIHPHQMAHVLSAKDLKIVAPQKEIKPR 254
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ GQ V +GG+ R D + + +VT + + N++LH K+ NAD ++ H G L
Sbjct: 255 TYQLDPGQTVFIGGVARFDFETGP-HSGFVTYFDN-NLTLHRTKLSNADSFYEKHRGDLL 312
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
PP ++ ++ + V+ S D+ GLGW + + ++ W G+
Sbjct: 313 TPPTAEE-LNDFPPLVREEFHVNEKS------DVVFEGLGWVT--VPAGVTVAAWVPKGV 363
Query: 608 EITLREPLV 616
+R+ ++
Sbjct: 364 AALVRKAMI 372
>gi|414083274|ref|YP_006991982.1| ribosome biogenesis GTPase YqeH [Carnobacterium maltaromaticum
LMA28]
gi|412996858|emb|CCO10667.1| ribosome biogenesis GTPase YqeH [Carnobacterium maltaromaticum
LMA28]
Length = 377
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 188/383 (49%), Gaps = 42/383 (10%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A E E GEV C RC LR+Y NE+ + + D DF RL+ G +A ++
Sbjct: 36 ALEKGLENGEV-YCQRCFRLRHY----NEIQDVQLTDDDF-----LRLLNEIGAEDA-LI 84
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
V V+D DF+G SL L + P L LVG KVDLLP + ++
Sbjct: 85 VNVIDIFDFNG--------SLIPGLH------RFVGNNPVL-LVGNKVDLLPHSLKRGKM 129
Query: 355 DRWVRHRAKAGGA-PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
+W+R RA G PK V L SA K + +LL I++ R +V+V+G N GKST
Sbjct: 130 TQWLRERAHEEGLRPK--DVILTSAMKPKEMDDLLKTIEKYREGR-DVFVVGVTNVGKST 186
Query: 414 LINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
LIN K +T + PGTTL RI L L DTPG++H H M+ L
Sbjct: 187 LINQIIKNTAGVADVITTSQFPGTTLD--RIEIPLDDGKSLIDTPGIIHRHQMAHVLGDK 244
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIE 533
+ K++ +KE++P Y++ GQ + GG+ R D Q + T + S ++ +H K+E
Sbjct: 245 DLKLIAPKKEIKPMVYQLNEGQTLFFGGVARFDYIQGGRRSF--TCYTSNDLKIHRTKLE 302
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGL 593
ADE++ NHVG LQPP +D + V S DI AGLGW ++
Sbjct: 303 KADELYANHVGEMLQPP-RKDEVDNFPELVRFEFSVKERS------DIVFAGLGWVTVNE 355
Query: 594 KGEASLTLWTYDGIEITLREPLV 616
G A + W G+++ +R+ L+
Sbjct: 356 PG-AVVAGWAPKGVDVVIRKSLI 377
>gi|334881686|emb|CCB82584.1| GTPase [Lactobacillus pentosus MP-10]
gi|339636928|emb|CCC15753.1| GTPase [Lactobacillus pentosus IG1]
Length = 378
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 132/415 (31%), Positives = 209/415 (50%), Gaps = 51/415 (12%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G + ++ + A +K A +AQ C RC LR+Y NE+
Sbjct: 12 IGCGAAIQTTDPKAAGYTPNSALQKSLASDAQD-----LYCQRCFRLRHY----NEIVPV 62
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ D DF R++AT +ANA +VV VVD D +G S+ L+ D
Sbjct: 63 GLTDDDFRRLLAT-----IRDANA-LVVYVVDIFDLNG--------SIIPGLQRFVGDNP 108
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNL 387
+ +LVG K D+LP Q+ T+L W+ + +A G ++ V L SA+K + +L
Sbjct: 109 V-------LLVGNKEDVLPRQLRRTKLREWMNQQVRAQGIKPVD-VALTSAKKGHAIDDL 160
Query: 388 LAFIKELAGPRGNVWVIGAQNAGKSTLIN-TFAKKEGVKVSKLTEAPIPGTTLGILRIGG 446
LA I++ R +V+V+G N GKSTLIN A G+K +T + PGTTL + I
Sbjct: 161 LAMIEKYRRGR-DVYVVGVTNVGKSTLINRIIANNTGLK-DLITTSRFPGTTLDKIEIP- 217
Query: 447 ILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLD 506
L K+ DTPG++HP M+ L+ D+ K+V +KE++P+ +++ GQ + +GG+ RLD
Sbjct: 218 -LDDGHKMVDTPGIIHPEQMAHVLSGDDLKLVSPQKEIRPKGFQLGNGQTLFLGGVARLD 276
Query: 507 LDQASVETIYV--TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKD 564
+ V+T+ TV+ N++LH + ENAD + HVG + PP G ++
Sbjct: 277 I----VDTLKPTGTVYVDNNLTLHRTRTENADNFYTKHVGELITPPTGA-AVADFPPLVR 331
Query: 565 RKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDR 619
+ KV+ TS DI GLGW ++ + + W G+ + R ++ R
Sbjct: 332 HEFKVTETS------DIVFEGLGWVTVA--ADTRVAGWAPKGVAVLTRPAMINKR 378
>gi|295706670|ref|YP_003599745.1| GTP-binding protein [Bacillus megaterium DSM 319]
gi|294804329|gb|ADF41395.1| GTP-binding protein [Bacillus megaterium DSM 319]
Length = 368
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 194/373 (52%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
EV +C RC L++Y NEV + + D DF +++ G + G+VV VVD DF
Sbjct: 34 EVIICQRCFRLKHY----NEVQDVSLTDDDF-----LKILNGIGQTD-GLVVKVVDIFDF 83
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DLLP + +L W++ AK
Sbjct: 84 NGSWLPGLHRFVGNN---------------KVLLVGNKADLLPKSIKKNKLIHWMKREAK 128
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+L+SA+K G+R + I+ + +V+V+G N GKST IN K+
Sbjct: 129 ELGLKSVD-VFLMSAQKGQGIREIAEAIEHYREGK-DVYVVGCTNVGKSTFINAIIKEVT 186
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L A LYDTPG+++ H M+ +++ + K++ +KE
Sbjct: 187 GEKDIITTSQYPGTTLDMIDIP--LDNGASLYDTPGIINHHQMAHYVDKRDLKLISPKKE 244
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P+ Y++ GQ ++ GGL RLD Q +++ T + S ++ +H K+E ADE+++
Sbjct: 245 IKPKVYQLNEGQTLYFGGLARLDYVQGGRKSL--TCYVSNDLHIHRTKLEKADELYEKQA 302
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G LQPP R ++ + + L + DI +GLGW ++ G + +
Sbjct: 303 GELLQPP----RPEQMDEFPE--LVAHEFTIKNEKTDIVFSGLGWVTVNESG-SKVVAHA 355
Query: 604 YDGIEITLREPLV 616
G+ + +R+ L+
Sbjct: 356 PKGVGVFVRDSLI 368
>gi|392948629|ref|ZP_10314234.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus pentosus
KCA1]
gi|392436134|gb|EIW14053.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus pentosus
KCA1]
Length = 378
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 132/415 (31%), Positives = 209/415 (50%), Gaps = 51/415 (12%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G + ++ + A +K A +AQ C RC LR+Y NE+
Sbjct: 12 IGCGAAIQTTDPKAAGYTPNSALQKSLASDAQD-----LYCQRCFRLRHY----NEIVPV 62
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ D DF R++AT +ANA +VV VVD D +G S+ L+ D
Sbjct: 63 GLTDDDFRRLLAT-----IRDANA-LVVYVVDIFDLNG--------SIIPGLQRFVGDNP 108
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNL 387
+ +LVG K D+LP Q+ T+L W+ + +A G ++ V L SA+K + +L
Sbjct: 109 V-------LLVGNKEDVLPRQLRRTKLREWMNQQVRAQGIKPVD-VALTSAKKGHAIDDL 160
Query: 388 LAFIKELAGPRGNVWVIGAQNAGKSTLIN-TFAKKEGVKVSKLTEAPIPGTTLGILRIGG 446
LA I++ R +V+V+G N GKSTLIN A G+K +T + PGTTL + I
Sbjct: 161 LAMIEKYRRGR-DVFVVGVTNVGKSTLINRIIANNTGLK-DLITTSRFPGTTLDKIEIP- 217
Query: 447 ILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLD 506
L K+ DTPG++HP M+ L+ D+ K+V +KE++P+ +++ GQ + +GG+ RLD
Sbjct: 218 -LDDGHKMVDTPGIIHPEQMAHVLSGDDLKLVSPQKEIRPKGFQLGNGQTLFLGGVARLD 276
Query: 507 LDQASVETIYV--TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKD 564
+ V+T+ TV+ N++LH + ENAD + HVG + PP G ++
Sbjct: 277 I----VDTLKPTGTVYVDNNLTLHRTRTENADNFYTKHVGELITPPTGA-AVADFPPLVR 331
Query: 565 RKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDR 619
+ KV+ TS DI GLGW ++ + + W G+ + R ++ R
Sbjct: 332 HEFKVTETS------DIVFEGLGWVTVA--ADTRVAGWAPKGVAVLTRPAMINKR 378
>gi|400289434|ref|ZP_10791463.1| GTP-binding protein YqeH [Streptococcus ratti FA-1 = DSM 20564]
gi|399922072|gb|EJN94887.1| GTP-binding protein YqeH [Streptococcus ratti FA-1 = DSM 20564]
Length = 368
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 192/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + I D +F +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVHISDDEF-----LKLLHEVGDSSA- 74
Query: 293 VVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV VVD DF+G + P + D L+LVG K D+LP V
Sbjct: 75 LVVNVVDIFDFNGSVIPG------LPRFISGND----------LLLVGNKADILPKSVKA 118
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
+++ +W+ RA G L+ V L SA+ ++ L+A I++L R +V+V+G N GK
Sbjct: 119 SKVKQWLTERAHEEGLRPLD-VLLTSAQNHYAIKELIASIEKLRKGR-DVYVVGVTNVGK 176
Query: 412 STLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
STLIN ++ +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 177 STLINAIIREITGDKDVITTSRFPGTTLDKIEIP--LDDGSYIFDTPGIIHRHQMAHYLS 234
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
K + +KE++P+TY++ Q + +GGL R D Q + + T + N+ +H K
Sbjct: 235 AKALKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFLQGNKQGF--TAYFDNNLKVHRTK 292
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ AD +K H G L PP ++ ++ + V G + DI +GLGW L
Sbjct: 293 LAGADAFYKKHAGELLTPP-DKEELADFPQLVRHEFAVDGKT------DIVFSGLGWIRL 345
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
G+A + W G+ + R+ L+
Sbjct: 346 A--GQAKIAAWAPQGVAVVTRKALI 368
>gi|312866371|ref|ZP_07726589.1| ribosome biogenesis GTPase YqeH [Streptococcus downei F0415]
gi|311098065|gb|EFQ56291.1| ribosome biogenesis GTPase YqeH [Streptococcus downei F0415]
Length = 368
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 194/380 (51%), Gaps = 41/380 (10%)
Query: 237 EAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVM 296
E +E GE+ C RC LR+Y NE+ + I D DF +L+ G++ A +VV
Sbjct: 30 EKSQETGEL-YCQRCFRLRHY----NEIVDVAITDDDF-----LKLLHEVGDSQA-LVVN 78
Query: 297 VVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR 356
VVD DF+G ++ + A +D ++LVG K D+LP V ++ +
Sbjct: 79 VVDIFDFNGSVIPGLSRFV------AGND---------VLLVGNKKDILPKSVKDGKVTQ 123
Query: 357 WVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN 416
W+ RA G ++ V L SA+ ++ L+A I+EL R +V+V+G N GKSTLIN
Sbjct: 124 WLTERAHEEGLRPVD-VLLTSAQNGQAIKELIARIEELRAGR-DVYVVGVTNVGKSTLIN 181
Query: 417 TFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQK 476
K+ +T + PGTTL + I L + ++DTPG++H H M+ L+ + K
Sbjct: 182 AIIKEITGNQEIITTSRFPGTTLDKIEIP--LDDGSYIFDTPGIIHRHQMAHYLSAKDLK 239
Query: 477 MVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENAD 536
V +KE++P+TY++ Q + +GGL R D Q + T + N+ LH K+E AD
Sbjct: 240 YVSPKKEIKPKTYQLNPSQTLFLGGLGRFDFLQGDKQGF--TAYFDNNLKLHRTKLEGAD 297
Query: 537 EIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
+ + H G L PP ++ A+ + + G + D+ +GLGW + + G
Sbjct: 298 DFYLKHAGSLLTPPSAKEVAN-FPKLVRHEFTIMGKT------DVVFSGLGW--VRVNGS 348
Query: 597 ASLTLWTYDGIEITLREPLV 616
A + W +G+ + +R+ ++
Sbjct: 349 ARVAAWAPEGVGVMVRKAII 368
>gi|365925269|ref|ZP_09448032.1| GTPase YqeH [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 372
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 192/382 (50%), Gaps = 41/382 (10%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A + Q E E+ C RC LR+Y NEV++ + D DF +++ G+ +A ++
Sbjct: 32 ALKKQVETKEL-YCKRCFRLRHY----NEVSDVNLTDDDF-----LKILTQIGDTDA-LI 80
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
V V+D DF G + + K +++VG K DLLP + T+L
Sbjct: 81 VNVIDIFDFSGSIIPGIQRYVGKN---------------PILMVGNKEDLLPKSLKRTKL 125
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
W+R A G + V LVSA K+ G+ LL+ I++ R +V+V+G N GKSTL
Sbjct: 126 KDWIRQSANLVGLRPAD-VALVSAGKNHGIATLLSLIEKYREGR-DVYVVGVTNVGKSTL 183
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN K++ +T + PGTTL + I L + L DTPG++H H M+ L+ E
Sbjct: 184 INQIIKQQTGINELITTSRFPGTTLDKIEIP--LDDEHFLIDTPGIIHQHQMAHFLSGKE 241
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
+ +KE++PR Y++ GQ + +GGL R D + I V+ N+ LH K+EN
Sbjct: 242 LNVASPQKEIKPRVYQLNAGQTLFLGGLARFDYITGEKDGI--VVYTDNNLMLHRTKLEN 299
Query: 535 ADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
AD +++ HVG LQPP ++ ++L + K S D+ +GLGW + +
Sbjct: 300 ADTLYEKHVGELLQPP-SEETLTKLPKLVRFEFKTVQKS------DLVFSGLGWIT--VS 350
Query: 595 GEASLTLWTYDGIEITLREPLV 616
A + W G+ +T+R ++
Sbjct: 351 AGAVVAGWAPKGVSVTIRRAMI 372
>gi|384044834|ref|YP_005492851.1| GTPase family protein [Bacillus megaterium WSH-002]
gi|345442525|gb|AEN87542.1| GTPase family protein [Bacillus megaterium WSH-002]
Length = 368
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 192/373 (51%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NEV + + D DF +++ G + G+VV VVD DF
Sbjct: 34 EAIICQRCFRLKHY----NEVQDVSLTDDDF-----LKILNGIGQTD-GLVVKVVDIFDF 83
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DLLP + +L W++ AK
Sbjct: 84 NGSWLPGLHRFVGNN---------------KVLLVGNKADLLPKSIKKNKLIHWMKREAK 128
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+L+SA+K G+R + I+ + +V+V+G N GKST IN K+
Sbjct: 129 ELGLKSVD-VFLMSAQKGQGIREIAEAIEHYREGK-DVYVVGCTNVGKSTFINAIIKEVT 186
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L A LYDTPG+++ H M+ +++ + K++ +KE
Sbjct: 187 GEKDIITTSQYPGTTLDMIDIP--LDNGASLYDTPGIINHHQMAHYVDKRDLKLISPKKE 244
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P+ Y++ GQ ++ GGL RLD Q +++ T + S ++ +H K+E ADE+++
Sbjct: 245 IKPKVYQLNEGQTLYFGGLARLDYVQGGRKSL--TCYVSNDLHIHRTKLEKADELYEKQA 302
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G LQPP ++ SE + + DI +GLGW ++ G + +
Sbjct: 303 GELLQPP-RPEQMSEFPELVAHEFTIKNEK-----TDIVFSGLGWVTVNESG-SKVVAHA 355
Query: 604 YDGIEITLREPLV 616
G+ + +R+ L+
Sbjct: 356 PKGVGVFVRDSLI 368
>gi|403070192|ref|ZP_10911524.1| GTPase YqeH [Oceanobacillus sp. Ndiop]
Length = 366
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 185/373 (49%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + I D DF ++++ S G+VV V+D D
Sbjct: 32 EDILCKRCFRLKHY----NEIQDVSITDDDFLQMVS------SIREANGLVVHVIDIFDV 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
DG SL K L D + +LVG K+DLLP + +L++W+R AK
Sbjct: 82 DG--------SLIKSLPRITGDNPI-------ILVGNKLDLLPKSTNRNKLEQWLRTEAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K+ V+L+S+ K G+ L I E NV+++G N GKST IN K+
Sbjct: 127 DAGI-KVKDVFLISSVKGTGIEELTEQI-EWYRNNKNVYIVGTTNVGKSTFINRLIKQST 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+T + PGTTLG + I L L DTPG+++ M+ ++ ++ K++ +KE
Sbjct: 185 GMGEVITTSYFPGTTLGFIEIP--LDENTSLIDTPGIVNKQQMAHYISDEDLKIITPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ Q ++ GGL R+D + ++ + S + +H K+E ADE+++NH
Sbjct: 243 IKARVYQLNSQQTLYFGGLARIDFIKGDRQSF--VCYFSNELPIHRTKLEKADELYENHA 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP + +L + K+ G DI GLGW S+ ++T +
Sbjct: 301 GELLSPP-NEKTLEQLPKLVESTFKIDGEK-----TDIVFPGLGWVSIA-GANTTVTAHS 353
Query: 604 YDGIEITLREPLV 616
G+ ++ R+ L+
Sbjct: 354 PKGVAVSKRKSLL 366
>gi|410456867|ref|ZP_11310718.1| GTPase YqeH [Bacillus bataviensis LMG 21833]
gi|409927249|gb|EKN64392.1| GTPase YqeH [Bacillus bataviensis LMG 21833]
Length = 368
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 188/373 (50%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NEV + + D DF +++ G +A ++VM+VD DF
Sbjct: 34 ETIICQRCFRLKHY----NEVQDVNLTDDDF-----LKILNEMGRTDA-LIVMIVDIFDF 83
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG KVDLLP V +L W++H AK
Sbjct: 84 NGSWLPGLHRFVGHN---------------KVLLVGNKVDLLPKSVKHNKLIHWMKHEAK 128
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V+LVSA K + V+ A I EL + +V+V+G N GKST IN K+
Sbjct: 129 ELGL-RPEEVFLVSAAKGVNVKETAAAIDELRNGK-DVYVVGCTNVGKSTFINRIIKEVT 186
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL I++I L + L D+PG+++ H M+ +++ + K++ +KE
Sbjct: 187 GEADVITTSHFPGTTLDIIKIP--LDDEKSLIDSPGIINHHQMAHFVDKKDLKIITPKKE 244
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P +++ GQ + GGL R D + + S +++H K ENA E+++ HV
Sbjct: 245 IKPMVFQLNEGQTLFFGGLARFDYISGGRRSF--VCYVSNELNIHRTKTENASELYEKHV 302
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP G ++ ++ + DI +GLGW ++ G A + +
Sbjct: 303 GEMLTPP-GSEQVETFPELVKQEFIIKEAK-----TDIVFSGLGWITVNEPG-AKVAAYV 355
Query: 604 YDGIEITLREPLV 616
G++ +R+ L+
Sbjct: 356 PKGVQTLIRKSLI 368
>gi|430821234|ref|ZP_19439846.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0045]
gi|430438671|gb|ELA49082.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0045]
Length = 369
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 193/385 (50%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E GEV C RC LR+Y NE+ + + D DF RL+ G +A
Sbjct: 27 QTALEKGLASGEV-YCQRCFRLRHY----NEIQDVSLTDDDF-----LRLLNELGQKDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP + T
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKVDILPKSLKKT 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L +W++ RA G ++ V L+SA+K + LL I+E R +V+++G N GKS
Sbjct: 121 KLTQWMKERAYEAGIRPVD-VLLISAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIKNTAGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ +++ KE++P+ Y++ GQ + +GGL R D + + + S +V++H K+
Sbjct: 237 KDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSNDVNIHRTKL 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
E ADE ++ HVG LQPP R +E+ + + + + V DI AGLGW +
Sbjct: 295 EKADEFYQKHVGGLLQPP----RPNEVEEFPE----LVRFEFSVKEKTDIVFAGLGWIT- 345
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ A + W G+++ R+ L+
Sbjct: 346 -VTAPAVIAGWAPKGVDVLKRKALI 369
>gi|257869176|ref|ZP_05648829.1| GTP-binding protein YqeH [Enterococcus gallinarum EG2]
gi|357050059|ref|ZP_09111271.1| hypothetical protein HMPREF9478_01254 [Enterococcus saccharolyticus
30_1]
gi|257803340|gb|EEV32162.1| GTP-binding protein YqeH [Enterococcus gallinarum EG2]
gi|355382229|gb|EHG29330.1| hypothetical protein HMPREF9478_01254 [Enterococcus saccharolyticus
30_1]
Length = 370
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 186/382 (48%), Gaps = 41/382 (10%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A E E GEV C RC LR+Y NE+ + + D DF RL+ G +A ++
Sbjct: 30 ALEKGLETGEV-YCQRCFRLRHY----NEIQDVSLTDDDF-----LRLLNELGQKDA-LI 78
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
V VVD DF+G SL L D + +LVG KVD+LP + +++
Sbjct: 79 VNVVDIFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKVDILPKSLKKSKM 123
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
+W+R RA G ++ V L SA+K + LL I R +V+V+G N GKSTL
Sbjct: 124 TQWMRERAHEAGLRPID-VLLTSAKKAAEMTELLQAIDHYREGR-DVYVVGVTNVGKSTL 181
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN K+ +T + PGTTL + I L L DTPG++H H M+ L + +
Sbjct: 182 INQIIKQTAGVQELITTSRFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGKKD 239
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
K+V KE++P++Y++ GQ + GG+ R D Q E + + +V LH K+E
Sbjct: 240 LKIVAPNKEIKPKSYQLNAGQTLFFGGVARFDFIQG--ERSSFIAYVANDVVLHRTKLEK 297
Query: 535 ADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
AD ++ HVG LQPP R EL + + V DI AGLGW ++
Sbjct: 298 ADAFYQKHVGGLLQPP----RPDELADFPEL---VRFEFSIKEKTDIVFAGLGWITVTKP 350
Query: 595 GEASLTLWTYDGIEITLREPLV 616
G + W G+++ R+ L+
Sbjct: 351 G--VVAGWAPKGVDVIKRKALI 370
>gi|294501323|ref|YP_003565023.1| GTP-binding protein [Bacillus megaterium QM B1551]
gi|294351260|gb|ADE71589.1| GTP-binding protein [Bacillus megaterium QM B1551]
Length = 368
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 193/373 (51%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NEV + + D DF +++ G + G+VV VVD DF
Sbjct: 34 EAIICQRCFRLKHY----NEVQDVSLTDDDF-----LKILNGIGQTD-GLVVKVVDIFDF 83
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DLLP + +L W++ AK
Sbjct: 84 NGSWLPGLHRFVGNN---------------KVLLVGNKADLLPKSIKKNKLIHWMKREAK 128
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+L+SA+K G+R + I+ + +V+V+G N GKST IN K+
Sbjct: 129 ELGLKSVD-VFLMSAQKGQGIREIAEAIEHYREGK-DVYVVGCTNVGKSTFINAIIKEVT 186
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L A LYDTPG+++ H M+ +++ + K++ +KE
Sbjct: 187 GEKDIITTSQYPGTTLDMIDIP--LDNGASLYDTPGIINHHQMAHYVDKRDLKLISPKKE 244
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P+ Y++ GQ ++ GGL RLD Q +++ T + S ++ +H K+E ADE+++
Sbjct: 245 IKPKVYQLNEGQTLYFGGLARLDYVQGGRKSL--TCYVSNDLHIHRTKLEKADELYEKQA 302
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G LQPP R ++ + + L + DI +GLGW ++ G + +
Sbjct: 303 GELLQPP----RPEQMDEFPE--LVAHEFTIKNEKTDIVFSGLGWVTVNESG-SKVVAHA 355
Query: 604 YDGIEITLREPLV 616
G+ + +R+ L+
Sbjct: 356 PKGVGVFVRDSLI 368
>gi|339010606|ref|ZP_08643176.1| GTP binding protein [Brevibacillus laterosporus LMG 15441]
gi|338772761|gb|EGP32294.1| GTP binding protein [Brevibacillus laterosporus LMG 15441]
Length = 379
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 192/380 (50%), Gaps = 38/380 (10%)
Query: 238 AQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMV 297
A K EV +C RC +++Y NEVA + D DF R++ G+ +VVMV
Sbjct: 37 ASALKREVVICQRCFRIKHY----NEVAPVEMHDDDF-----LRILNGIGSTKC-LVVMV 86
Query: 298 VDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
VD DF G + + + + + ++LVG KVDLLP ++ R+ W
Sbjct: 87 VDLFDFQGSWLRGLPRFVGQN---------------PILLVGNKVDLLPRNINLNRVKNW 131
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
++H AK G K N V LVSA K +G+ LLA I E R +V+++G N GKSTLIN
Sbjct: 132 IQHEAKERGL-KPNEVVLVSAEKGIGIDELLARIGEFRKGR-DVYIVGVTNVGKSTLINR 189
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
G ++T +P PGTTL + I L ++DTPG+++ + ++ ++ +
Sbjct: 190 ILHDYGAADMEITTSPFPGTTLDKIEIP--LEDGRSIFDTPGIINRDQIGHLVSPEDLRK 247
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
+ + + PR +++ Q + GGL R+D + + + + ++ +H K++NA+E
Sbjct: 248 LTPKSRINPRVFQLNDKQTLFFGGLARVDYVRGERQPF--ACYLANDLYIHRTKLDNAEE 305
Query: 538 IWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNG-IDIAAAGLGWFSLGLKGE 596
+ + H G L PP G+ A L + LK+ D NG DI AGLGW +L K +
Sbjct: 306 VLEKHHGEMLAPPSGE-AAKALLPFTRYTLKI-----DTNGPTDIVIAGLGWIALQGKVK 359
Query: 597 ASLTLWTYDGIEITLREPLV 616
+ + G+ + LR+ L+
Sbjct: 360 GVVEVHVPKGVSVGLRKGLI 379
>gi|380032375|ref|YP_004889366.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
WCFS1]
gi|342241618|emb|CCC78852.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
WCFS1]
Length = 378
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 206/415 (49%), Gaps = 51/415 (12%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G + ++ + A +K A EAQ C RC LR+Y NE+
Sbjct: 12 IGCGAAIQTTDPKAAGYTPNSALQKSLASEAQD-----LYCQRCFRLRHY----NEIVPV 62
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ D DF ++AT +ANA +VV VVD D +G S+ L+ D
Sbjct: 63 GLTDDDFRHLLAT-----IRDANA-LVVYVVDIFDLNG--------SIIPGLQRFVGDNP 108
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNL 387
+ +LVG K D+LP Q+ T+L W+ + +A G ++ V L SA+K + L
Sbjct: 109 V-------LLVGNKEDVLPRQLRRTKLREWMNQQVRAQGIKPVD-VALTSAKKGHSIDEL 160
Query: 388 LAFIKELAGPRGNVWVIGAQNAGKSTLIN-TFAKKEGVKVSKLTEAPIPGTTLGILRIGG 446
LA I++ R +V+V+G N GKSTLIN A G+K +T + PGTTL + I
Sbjct: 161 LAMIEKYRRGR-DVYVVGVTNVGKSTLINRIIANNTGLK-DLITTSRFPGTTLDKIEIP- 217
Query: 447 ILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLD 506
L + DTPG++HP M+ L+ D+ K+V ++E++P+ +++ GQ + +GG+ RLD
Sbjct: 218 -LDDGHMMVDTPGIIHPEQMAHVLSGDDLKLVSPQREIRPKGFQLGNGQTLFLGGVARLD 276
Query: 507 LDQASVETIYV--TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKD 564
+ V+T+ TV+ N++LH + ENAD + HVG + PP G D ++
Sbjct: 277 I----VDTLKATGTVYVDNNLTLHRTRTENADNFYTKHVGELITPPTG-DAVADFPPLVR 331
Query: 565 RKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDR 619
+ KV+ S DI GLGW ++ + + W G+ + R ++ R
Sbjct: 332 HEFKVTEIS------DIVFEGLGWVTVA--ADTRVAAWAPKGVAVLTRPAMINKR 378
>gi|357235992|ref|ZP_09123335.1| GTP-binding protein [Streptococcus criceti HS-6]
gi|356883974|gb|EHI74174.1| GTP-binding protein [Streptococcus criceti HS-6]
Length = 368
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 196/380 (51%), Gaps = 41/380 (10%)
Query: 237 EAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVM 296
E +E GE+ C RC LR+Y NE+ + I D DF +L+ G+++A +++
Sbjct: 30 EKSQETGEL-YCQRCFRLRHY----NEIVDVAISDDDF-----LKLLHEVGDSDA-LILN 78
Query: 297 VVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR 356
VVD DF+G ++ + A +D ++LVG K D+LP V ++ +
Sbjct: 79 VVDIFDFNGSVIPSLSRFV------AGND---------VLLVGNKKDILPKSVKNGKVTQ 123
Query: 357 WVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN 416
W+ RA G ++ V L SA+ ++ L+A I++L R +V+V+G N GKSTLIN
Sbjct: 124 WLTERAHEEGLRPVD-VLLTSAQNGQAIKELIARIEKLRAGR-DVYVVGVTNVGKSTLIN 181
Query: 417 TFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQK 476
K+ +T + PGTTL + I L A ++DTPG++H H M+ L+ + K
Sbjct: 182 AIIKEITGDQEVITTSRFPGTTLDKIEIP--LDDGAYIFDTPGIIHRHQMAHYLSAKDLK 239
Query: 477 MVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENAD 536
V +KE++P+TY++ Q + +GGL R D + + T + N+ LH K+E AD
Sbjct: 240 FVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVEGDKQGF--TAYFDNNLKLHRTKLEGAD 297
Query: 537 EIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
+ + H G L PP ++ A+ + ++G + D+ +GLGW + + G
Sbjct: 298 DFYLKHAGSLLTPPSAKEVAN-FPKLVRHEFTITGKT------DVVFSGLGW--VRVNGS 348
Query: 597 ASLTLWTYDGIEITLREPLV 616
A + W +G+ + +R+ ++
Sbjct: 349 ARVAAWAPEGVGVMVRKAII 368
>gi|317128279|ref|YP_004094561.1| ribosome biogenesis GTPase YqeH [Bacillus cellulosilyticus DSM
2522]
gi|315473227|gb|ADU29830.1| ribosome biogenesis GTPase YqeH [Bacillus cellulosilyticus DSM
2522]
Length = 372
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 192/380 (50%), Gaps = 59/380 (15%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
EV +C RC L++Y NEV + + D DF +++ G NA ++V VVD DF
Sbjct: 37 EVIICQRCFKLKHY----NEVQDVPLTDDDF-----LKILNELGKKNA-LIVKVVDIFDF 86
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLPSQVSPTRLDRW 357
DG + + LP+ V LVG KVDLLP V +L W
Sbjct: 87 DGSW---------------------LQGLPRFVGNNPILLVGNKVDLLPKSVKRNKLVNW 125
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
++ +K G K ++L+SA GV + I + R +V+V+G+ N GKST IN
Sbjct: 126 MKWASKNYGL-KPADIHLMSAETGEGVMETASLIDKWREGR-DVYVVGSTNVGKSTFINR 183
Query: 418 FAKKEGVKVSKL-TEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQK 476
K+ G L T + IPGTTL ++ I L A L+DTPG+++ H M+ RLN++E K
Sbjct: 184 LLKEFGADDEFLITTSNIPGTTLDMIDIP--LDDGASLFDTPGIINHHQMAHRLNKNELK 241
Query: 477 MVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENAD 536
++ RKE++P +++ Q + GGL RLD Q E + S +++H K+E AD
Sbjct: 242 VISPRKEVKPTVFQLNDQQTLFFGGLARLDFLQG--EGRSFVCYFSNELNIHRTKLEKAD 299
Query: 537 EIWKNHVGIRLQPPIGQ--DRASEL--GTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
++++NH+G L PP + D EL WK + K DI +GLGW ++
Sbjct: 300 QLFENHLGELLTPPFKENVDSFPELVKKEWKLTEEKQ----------DIVISGLGWVTVH 349
Query: 593 LKGEASLTLWTYDGIEITLR 612
KG A + + G+ +++R
Sbjct: 350 GKG-AQIRTFAPKGVHVSIR 368
>gi|417885655|ref|ZP_12529807.1| ribosome biogenesis GTPase YqeH [Lactobacillus oris F0423]
gi|341595151|gb|EGS37826.1| ribosome biogenesis GTPase YqeH [Lactobacillus oris F0423]
Length = 372
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 189/369 (51%), Gaps = 40/369 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+A + D DF RL+ +ANA ++V VVD DF+G
Sbjct: 44 CQRCFRLRHY----NEIAPVSLTDDDF-----LRLLGQIRDANA-LIVYVVDIFDFNG-- 91
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
SL L D + +LVG K DLLP + +L W+R +A G
Sbjct: 92 ------SLIPGLHRFVGDNPV-------LLVGNKEDLLPRSLRRPKLCDWIRQQANQAGI 138
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
++ V LVSA+K+ + LLA I++ R +V+V+G N GKSTLIN K+
Sbjct: 139 RPVDTV-LVSAKKNHEIDELLATIEKYRHDR-DVYVVGVTNVGKSTLINQIIKQRTGVQD 196
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL + I L KL DTPG++HPH M+ L+ + K+V +KE++PR
Sbjct: 197 LITTSRFPGTTLDEIEIP--LDDGHKLVDTPGIIHPHQMAHVLSAKDLKIVAPQKEIKPR 254
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ GQ V +GG+ R D + + +VT + + N++LH K+ NAD ++ + G L
Sbjct: 255 TYQLDPGQTVFIGGVARFDFETGP-HSGFVTYFDN-NLTLHRTKLSNADSFYEKYRGGLL 312
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
PP ++ ++ + V+ S D+ GLGW + + ++ W G+
Sbjct: 313 TPPTAEE-LNDFPPLVREEFHVNEKS------DVVFEGLGWVT--VPAGVTVAAWVPKGV 363
Query: 608 EITLREPLV 616
+R+ ++
Sbjct: 364 AALVRKAMI 372
>gi|427395311|ref|ZP_18888233.1| ribosome biogenesis GTPase YqeH [Enterococcus durans FB129-CNAB-4]
gi|430862527|ref|ZP_19479844.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1573]
gi|430963077|ref|ZP_19487369.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1576]
gi|431010994|ref|ZP_19489738.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1578]
gi|431263923|ref|ZP_19505811.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1623]
gi|425723811|gb|EKU86697.1| ribosome biogenesis GTPase YqeH [Enterococcus durans FB129-CNAB-4]
gi|430549105|gb|ELA88952.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1573]
gi|430555502|gb|ELA95039.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1576]
gi|430560016|gb|ELA99322.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1578]
gi|430576359|gb|ELB15010.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1623]
Length = 369
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 191/387 (49%), Gaps = 47/387 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E GEV C RC LR+Y NE+ + + D DF RL+ G +A
Sbjct: 27 QTALEKGLASGEV-YCQRCFRLRHY----NEIQDVSLTDDDF-----LRLLNELGQKDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP + T
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKVDILPKSLKKT 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L +W++ RA G ++ V L SA+K + LL I+E R +V+++G N GKS
Sbjct: 121 KLTQWMKERAYEAGIRPVD-VLLTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIKNTAGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ +++ KE++P+ Y++ GQ + +GGL R D + + + S +V++H K+
Sbjct: 237 KDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSNDVNIHRTKL 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN---GIDIAAAGLGWF 589
E ADE ++ HVG LQPP R E+ + + +D + DI AGLGW
Sbjct: 295 EKADEFYQKHVGGLLQPP----RPDEVEAFPEL------VRFDFSVKEKTDIVFAGLGWI 344
Query: 590 SLGLKGEASLTLWTYDGIEITLREPLV 616
+ + A + W G+++ R+ L+
Sbjct: 345 T--VTAPAVIAGWAPKGVDVLKRKALI 369
>gi|347522463|ref|YP_004780034.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|385833847|ref|YP_005871622.1| GTP-binding protein [Lactococcus garvieae Lg2]
gi|343181031|dbj|BAK59370.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|343183000|dbj|BAK61338.1| GTP-binding protein [Lactococcus garvieae Lg2]
Length = 368
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 192/379 (50%), Gaps = 40/379 (10%)
Query: 238 AQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMV 297
A++ + + C RC LR+Y NE+A+ + D DF RL+ G +A ++V V
Sbjct: 30 AKRGEDDALYCQRCFRLRHY----NEIADVSLTDDDF-----LRLLSEIGEHDA-LIVNV 79
Query: 298 VDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
VD DF+G SL L + L +LV K D+LP + ++ W
Sbjct: 80 VDIFDFNG--------SLIPSLHRFTGNNDL-------LLVANKKDILPHSLKVGKMSAW 124
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
++ +AK G L+ V + SA+ VR L+ I+++ R +V+V+G N GKSTLIN
Sbjct: 125 LKEQAKRAGLRPLD-VLVTSAKNQDDVRELMEKIEKMRKGR-DVYVVGVTNVGKSTLINA 182
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
K + +T + PGTTL + I L + L DTPG++H M+ L + K+
Sbjct: 183 IIKLVTGDDNVITTSRFPGTTLDKIEIP--LDDDSLLIDTPGIIHRGQMAHYLEAKDLKL 240
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
V +KE++P+TY++ GQ + +GGL R D Q + + TV+ + +H K+E A E
Sbjct: 241 VSPKKEIKPKTYQLNAGQTLFLGGLARFDYIQGEKQGL--TVFCDNELDIHRTKLEGATE 298
Query: 538 IWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEA 597
++ H G LQPP ++ S+ ++ V S DI +GLGW + +G
Sbjct: 299 FYEKHAGGLLQPPRAKN-LSDFPKLIRKEFSVKEKS------DIVFSGLGWIRVAERG-- 349
Query: 598 SLTLWTYDGIEITLREPLV 616
+T W +G+++ LR+ LV
Sbjct: 350 VVTAWVPEGVDVVLRKALV 368
>gi|293556693|ref|ZP_06675257.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1039]
gi|291601155|gb|EFF31443.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1039]
Length = 369
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 191/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E GEV C RC LR+Y NE+ + + D DF RL+ G +A
Sbjct: 27 QTALEKGLASGEV-YCQRCFRLRHY----NEIQDVSLTDDDF-----LRLLNELGQKDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP + T
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKVDILPKSLKKT 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L +W++ RA G ++ V L SA+K + LL I+E R +V+++G N GKS
Sbjct: 121 KLTQWMKERAYEAGIRPVD-VLLTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIKNTAGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ +++ KE++P+ Y++ GQ + +GGL R D + + + S +V++H K+
Sbjct: 237 KDLRIIAPLKEIKPKVYQMNEGQTLFLGGLARFDFISGNRASF--IAYVSNDVNIHRTKL 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
E ADE ++ HVG LQPP R E+ + + + + V DI AGLGW +
Sbjct: 295 EKADEFYQKHVGGLLQPP----RPDEVEAFPE----LVRFEFSVKEKTDIVFAGLGWIT- 345
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ A + W G+++ R+ L+
Sbjct: 346 -VTAPAVIAGWAPKGVDVLKRKALI 369
>gi|293569277|ref|ZP_06680575.1| nitric-oxide synthase [Enterococcus faecium E1071]
gi|406579805|ref|ZP_11055032.1| GTPase YqeH [Enterococcus sp. GMD4E]
gi|406582233|ref|ZP_11057362.1| GTPase YqeH [Enterococcus sp. GMD3E]
gi|406584274|ref|ZP_11059308.1| GTPase YqeH [Enterococcus sp. GMD2E]
gi|406589173|ref|ZP_11063616.1| GTPase YqeH [Enterococcus sp. GMD1E]
gi|410936072|ref|ZP_11367943.1| GTPase YqeH [Enterococcus sp. GMD5E]
gi|425057709|ref|ZP_18461115.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 504]
gi|430824166|ref|ZP_19442733.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0120]
gi|430844678|ref|ZP_19462575.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1050]
gi|430867479|ref|ZP_19482473.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1574]
gi|431235846|ref|ZP_19503129.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1622]
gi|431382667|ref|ZP_19511260.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1627]
gi|431446124|ref|ZP_19513806.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1630]
gi|431523905|ref|ZP_19516930.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1634]
gi|431743338|ref|ZP_19532218.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2071]
gi|431760682|ref|ZP_19549279.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3346]
gi|447912726|ref|YP_007394138.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Enterococcus faecium NRRL B-2354]
gi|291587983|gb|EFF19833.1| nitric-oxide synthase [Enterococcus faecium E1071]
gi|403040021|gb|EJY51128.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 504]
gi|404455024|gb|EKA01896.1| GTPase YqeH [Enterococcus sp. GMD4E]
gi|404458385|gb|EKA04819.1| GTPase YqeH [Enterococcus sp. GMD3E]
gi|404464320|gb|EKA09868.1| GTPase YqeH [Enterococcus sp. GMD2E]
gi|404471251|gb|EKA15801.1| GTPase YqeH [Enterococcus sp. GMD1E]
gi|410735535|gb|EKQ77445.1| GTPase YqeH [Enterococcus sp. GMD5E]
gi|430441550|gb|ELA51647.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0120]
gi|430496109|gb|ELA72214.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1050]
gi|430550490|gb|ELA90286.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1574]
gi|430572783|gb|ELB11629.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1622]
gi|430581038|gb|ELB19485.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1627]
gi|430584863|gb|ELB23177.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1634]
gi|430585768|gb|ELB24040.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1630]
gi|430607172|gb|ELB44500.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2071]
gi|430623767|gb|ELB60445.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3346]
gi|445188435|gb|AGE30077.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Enterococcus faecium NRRL B-2354]
Length = 369
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 191/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E GEV C RC LR+Y NE+ + + D DF RL+ G +A
Sbjct: 27 QTALEKGLASGEV-YCQRCFRLRHY----NEIQDVSLTDDDF-----LRLLNELGQKDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP + T
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKVDILPKSLKKT 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L +W++ RA G ++ V L SA+K + LL I+E R +V+++G N GKS
Sbjct: 121 KLTQWMKERAYEAGIRPVD-VLLTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIKNTAGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ +++ KE++P+ Y++ GQ + +GGL R D + + + S +V++H K+
Sbjct: 237 KDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSNDVNIHRTKL 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
E ADE ++ HVG LQPP R E+ + + + + V DI AGLGW +
Sbjct: 295 EKADEFYQKHVGGLLQPP----RPDEVEAFPE----LVRFEFSVKEKTDIVFAGLGWIT- 345
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ A + W G+++ R+ L+
Sbjct: 346 -VTAPAVIAGWAPKGVDVLKRKALI 369
>gi|293571008|ref|ZP_06682051.1| nitric-oxide synthase [Enterococcus faecium E980]
gi|424833434|ref|ZP_18258158.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R501]
gi|424984138|ref|ZP_18396689.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV69]
gi|424987609|ref|ZP_18399980.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV38]
gi|430829410|ref|ZP_19447503.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0269]
gi|430833624|ref|ZP_19451635.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0679]
gi|430836932|ref|ZP_19454908.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0680]
gi|430839014|ref|ZP_19456956.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0688]
gi|430840824|ref|ZP_19458746.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1007]
gi|430859776|ref|ZP_19477385.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1552]
gi|430869739|ref|ZP_19482939.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1575]
gi|431067593|ref|ZP_19494012.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1604]
gi|431099487|ref|ZP_19496653.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1613]
gi|431188241|ref|ZP_19500153.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1620]
gi|431738177|ref|ZP_19527122.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1972]
gi|431741776|ref|ZP_19530677.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2039]
gi|431745631|ref|ZP_19534475.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2134]
gi|291608934|gb|EFF38213.1| nitric-oxide synthase [Enterococcus faecium E980]
gi|402922555|gb|EJX42921.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R501]
gi|402969777|gb|EJX86163.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV69]
gi|402974021|gb|EJX90095.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV38]
gi|430480849|gb|ELA58020.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0269]
gi|430486029|gb|ELA62897.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0679]
gi|430487713|gb|ELA64421.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0680]
gi|430491011|gb|ELA67493.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0688]
gi|430494780|gb|ELA71009.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1007]
gi|430543313|gb|ELA83388.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1552]
gi|430559428|gb|ELA98778.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1575]
gi|430568018|gb|ELB07076.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1604]
gi|430570988|gb|ELB09927.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1613]
gi|430572523|gb|ELB11375.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1620]
gi|430597615|gb|ELB35398.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1972]
gi|430601118|gb|ELB38734.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2039]
gi|430610387|gb|ELB47539.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2134]
Length = 369
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 192/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E GEV C RC LR+Y NE+ + + D DF RL+ G +A
Sbjct: 27 QTALEKGLASGEV-YCQRCFRLRHY----NEIQDVSLTDDDF-----LRLLNELGQKDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP + T
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKVDILPKSLKKT 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L +W++ RA G ++ V L SA+K + LL I+E R +V+++G N GKS
Sbjct: 121 KLTQWMKERAYEAGIRPVD-VLLTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIKNTAGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ +++ KE++P+ Y++ GQ + +GGL R D + + + S +V++H K+
Sbjct: 237 KDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSNDVNIHRTKL 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
E ADE ++ HVG LQPP R +E+ + + + + V DI AGLGW +
Sbjct: 295 EKADEFYQKHVGGLLQPP----RPNEVEEFPE----LVRFEFSVKEKTDIVFAGLGWIT- 345
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ A + W G+++ R+ L+
Sbjct: 346 -VTAPAVIAGWAPKGVDVLKRKALI 369
>gi|23099443|ref|NP_692909.1| GTP-binding protein YqeH [Oceanobacillus iheyensis HTE831]
gi|22777672|dbj|BAC13944.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 366
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 195/373 (52%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E+ +C RC L++Y NE+ + I D DF ++++ S G++V ++D D
Sbjct: 32 EIVLCKRCFRLKHY----NEIQDVNISDDDFLQMVS------SIRDTDGLIVHLIDIFDV 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
DG +L K L +++ P ++LVG K+DLLP + +L W++ A
Sbjct: 82 DG--------TLLKSL------PRITGANP-ILLVGNKLDLLPKSTNVNKLKNWLQREAS 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K+ + +S++K G+ +L I+ G + +V+++G N GKST IN ++
Sbjct: 127 QLGI-KVKDIAFISSKKGTGIDSLKQLIETYRGKK-DVFIVGTTNVGKSTFINKLIEQST 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTLG + I L + L DTPG+++ M+ ++ + K + KE
Sbjct: 185 GEANAITTSYFPGTTLGFIEIP--LDERNVLVDTPGIVNKQQMAHYVSDKDLKTITPNKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y+++ Q + +GGL RLD + ++ + S +S+H K+E AD ++++H+
Sbjct: 243 IKARVYQLQDQQTLFIGGLARLDFLKGEKQSF--VCYFSNELSIHRTKLEKADALYEDHL 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP + + L + + K++ DI GLGW S+ KG A++ T
Sbjct: 301 GALLSPP-DSESVNNLPEFVGKTFKLNDEK-----TDIVFPGLGWISVQGKG-ATVQAHT 353
Query: 604 YDGIEITLREPLV 616
+ GI IT+R+ L+
Sbjct: 354 WKGISITVRKSLI 366
>gi|260584202|ref|ZP_05851950.1| ribosome biogenesis GTPase YqeH [Granulicatella elegans ATCC
700633]
gi|260158828|gb|EEW93896.1| ribosome biogenesis GTPase YqeH [Granulicatella elegans ATCC
700633]
Length = 371
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 179/376 (47%), Gaps = 40/376 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
EK E C RC LRNY NE+ + D DF ++++ S +VV VVD
Sbjct: 36 EKEEPVYCQRCFRLRNY----NELQSASLSDDDFLKMLS------SIAEEDALVVYVVDL 85
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
D G S+ L+ + + + V KVDL P V+ RL W+
Sbjct: 86 FDLYG--------SMISGLKRFIGNNPV-------LFVANKVDLYPKSVNRNRLKNWIER 130
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
AK G ++ + LVSA K + + LL I E + + +V+G N GKSTLIN +
Sbjct: 131 FAKEYGIRPVDTI-LVSANKRIQIDELLDKINEYRQGK-DAYVVGVTNVGKSTLINKLIQ 188
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
G +T + PGTTLG + I K+ L DTPG++H H ++ L E K V
Sbjct: 189 SIGGTKDVITTSQFPGTTLGQIYIP--FDEKSSLIDTPGIIHRHQIAHYLAEKEVKKVLP 246
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KELQP+T+++ Q + +GGL+R+D + ++ T + + LH K+E ADE +
Sbjct: 247 QKELQPKTFQLNAEQTIFIGGLVRVDYTKGERNSL--TFYTPQTIELHRTKLEKADEFYA 304
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H G L PP G D + T + V S DI AGLGW ++ G ++
Sbjct: 305 RHNGTILTPPTG-DNVKQYPTLQKIVFSVKEKS------DIVIAGLGWVTIQKPG--TIE 355
Query: 601 LWTYDGIEITLREPLV 616
+W+ +++ R ++
Sbjct: 356 IWSPKEVDVIKRPSII 371
>gi|254556448|ref|YP_003062865.1| GTP-binding protein YqeH [Lactobacillus plantarum JDM1]
gi|254045375|gb|ACT62168.1| GTP-binding protein YqeH [Lactobacillus plantarum JDM1]
Length = 378
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 206/415 (49%), Gaps = 51/415 (12%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G + ++ + A +K A +AQ C RC LR+Y NE+
Sbjct: 12 IGCGAAIQTTNPKAAGYTPNSALQKSLASDAQD-----LYCQRCFRLRHY----NEIVPV 62
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ D DF ++AT +ANA +VV VVD D +G S+ L+ D
Sbjct: 63 GLTDDDFRHLLAT-----IRDANA-LVVYVVDIFDLNG--------SIIPGLQRFVGDNP 108
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNL 387
+ +LVG K D+LP Q+ T+L W+ + +A G ++ V L SA+K + L
Sbjct: 109 V-------LLVGNKEDVLPRQLRRTKLREWMNQQVRAQGIKPVD-VALTSAKKGHSIDEL 160
Query: 388 LAFIKELAGPRGNVWVIGAQNAGKSTLIN-TFAKKEGVKVSKLTEAPIPGTTLGILRIGG 446
LA I++ R +V+V+G N GKSTLIN A G+K +T + PGTTL + I
Sbjct: 161 LAMIEKYRRGR-DVYVVGVTNVGKSTLINRIIANNTGLK-DLITTSRFPGTTLDKIEIP- 217
Query: 447 ILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLD 506
L + DTPG++HP M+ L+ D+ K+V ++E++P+ +++ GQ + +GG+ RLD
Sbjct: 218 -LDDGHMMVDTPGIIHPEQMAHVLSGDDLKLVSPQREIRPKGFQLGNGQTLFLGGVARLD 276
Query: 507 LDQASVETIYV--TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKD 564
+ V+T+ TV+ N++LH + ENAD + HVG + PP G D ++
Sbjct: 277 I----VDTLKATGTVYVDNNLTLHRTRTENADNFYTKHVGELITPPTG-DAVADFPPLVR 331
Query: 565 RKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDR 619
+ KV+ S DI GLGW ++ + + W G+ + R ++ R
Sbjct: 332 HEFKVTEIS------DIVFEGLGWVTVA--ADTRVAAWAPKGVAVLTRPAMINKR 378
>gi|300767171|ref|ZP_07077083.1| ribosome biogenesis GTPase YqeH [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308180390|ref|YP_003924518.1| ribosome biogenesis GTPase YqeH [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|418275051|ref|ZP_12890463.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448821057|ref|YP_007414219.1| Ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
ZJ316]
gi|300494990|gb|EFK30146.1| ribosome biogenesis GTPase YqeH [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308045881|gb|ADN98424.1| ribosome biogenesis GTPase YqeH [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|376009522|gb|EHS82850.1| ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448274554|gb|AGE39073.1| Ribosome biogenesis GTPase, YqeH family [Lactobacillus plantarum
ZJ316]
Length = 378
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 206/415 (49%), Gaps = 51/415 (12%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G + ++ + A +K A +AQ C RC LR+Y NE+
Sbjct: 12 IGCGAAIQTTDPKAAGYTPNSALQKSLASDAQD-----LYCQRCFRLRHY----NEIVPV 62
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ D DF ++AT +ANA +VV VVD D +G S+ L+ D
Sbjct: 63 GLTDDDFRHLLAT-----IRDANA-LVVYVVDIFDLNG--------SIIPGLQRFVGDNP 108
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNL 387
+ +LVG K D+LP Q+ T+L W+ + +A G ++ V L SA+K + L
Sbjct: 109 V-------LLVGNKEDVLPRQLRRTKLREWMNQQVRAQGIKPVD-VALTSAKKGHSIDEL 160
Query: 388 LAFIKELAGPRGNVWVIGAQNAGKSTLIN-TFAKKEGVKVSKLTEAPIPGTTLGILRIGG 446
LA I++ R +V+V+G N GKSTLIN A G+K +T + PGTTL + I
Sbjct: 161 LAMIEKYRRGR-DVYVVGVTNVGKSTLINRIIANNTGLK-DLITTSRFPGTTLDKIEIP- 217
Query: 447 ILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLD 506
L + DTPG++HP M+ L+ D+ K+V ++E++P+ +++ GQ + +GG+ RLD
Sbjct: 218 -LDDGHMMVDTPGIIHPEQMAHVLSGDDLKLVSPQREIRPKGFQLGNGQTLFLGGVARLD 276
Query: 507 LDQASVETIYV--TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKD 564
+ V+T+ TV+ N++LH + ENAD + HVG + PP G D ++
Sbjct: 277 I----VDTLKATGTVYVDNNLTLHRTRTENADNFYTKHVGELITPPTG-DAVADFPPLVR 331
Query: 565 RKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDR 619
+ KV+ S DI GLGW ++ + + W G+ + R ++ R
Sbjct: 332 HEFKVTEIS------DIVFEGLGWVTVA--ADTRVAAWAPKGVAVLTRPAMINKR 378
>gi|430827026|ref|ZP_19445194.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0164]
gi|431765842|ref|ZP_19554343.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E4215]
gi|430444572|gb|ELA54410.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0164]
gi|430627559|gb|ELB64050.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E4215]
Length = 369
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 192/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E GEV C RC LR+Y NE+ + + D DF RL+ G +A
Sbjct: 27 QTALEKGLASGEV-YCQRCFRLRHY----NEIQDVSLTDDDF-----LRLLNELGQKDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP + T
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKVDILPKSLKKT 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L +W++ RA G ++ V L SA+K + LL I+E R +V+++G N GKS
Sbjct: 121 KLTQWMKERAYEAGIRPVD-VLLTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIKNTAGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ +++ KE++P+ Y++ GQ + +GGL R D + + + S +V++H K+
Sbjct: 237 KDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSNDVNIHRTKL 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
E ADE ++ H+G LQPP R +E+ + + + + V DI AGLGW +
Sbjct: 295 EKADEFYQKHIGGLLQPP----RPNEVEEFPE----LVRFEFSVKEKTDIVFAGLGWIT- 345
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ A + W G+++ R+ L+
Sbjct: 346 -VTAPAVIAGWAPKGVDVLKRKALI 369
>gi|421873989|ref|ZP_16305598.1| ribosome biogenesis GTPase YqeH [Brevibacillus laterosporus GI-9]
gi|372457100|emb|CCF15147.1| ribosome biogenesis GTPase YqeH [Brevibacillus laterosporus GI-9]
Length = 379
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 191/380 (50%), Gaps = 38/380 (10%)
Query: 238 AQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMV 297
A K EV +C RC +++Y NEVA + D DF R++ G+ +VVMV
Sbjct: 37 ASALKREVVICQRCFRIKHY----NEVAPVEMHDDDF-----LRILNGIGSTKC-LVVMV 86
Query: 298 VDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
VD DF G + + + + + ++LVG KVDLLP ++ R+ W
Sbjct: 87 VDLFDFQGSWLRGLPRFVGQN---------------PILLVGNKVDLLPRNINLNRVKNW 131
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
++H AK G K N V LVSA K G+ LLA I E R +V+++G N GKSTLIN
Sbjct: 132 IQHEAKERGL-KPNEVVLVSAEKGTGIDELLARIGEFRKGR-DVYIVGVTNVGKSTLINR 189
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
G ++T +P PGTTL + I L ++DTPG+++ + ++ ++ +
Sbjct: 190 ILHDYGAADMEITTSPFPGTTLDKIEIP--LEDGRSIFDTPGIINRDQIGHLVSPEDLRK 247
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
+ + + PR +++ Q + GGL R+D + + + + ++ +H K++NA+E
Sbjct: 248 LTPKSRINPRVFQLNDKQTLFFGGLARVDYVRGERQPF--ACYLANDLYIHRTKLDNAEE 305
Query: 538 IWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNG-IDIAAAGLGWFSLGLKGE 596
+ + H G L PP G+ A L + LK+ D NG DI AGLGW +L K +
Sbjct: 306 VLEKHHGEMLAPPSGE-AAKALLPFTRYTLKI-----DTNGPTDIVIAGLGWIALQGKVK 359
Query: 597 ASLTLWTYDGIEITLREPLV 616
+ + G+ + LR+ L+
Sbjct: 360 GVVEVHVPKGVSVGLRKGLI 379
>gi|297584672|ref|YP_003700452.1| ribosome biogenesis GTPase YqeH [Bacillus selenitireducens MLS10]
gi|297143129|gb|ADH99886.1| ribosome biogenesis GTPase YqeH [Bacillus selenitireducens MLS10]
Length = 373
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 194/375 (51%), Gaps = 43/375 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
EV +C RC+ L++Y NEV + + D DF R++ A G+VV VVD DF
Sbjct: 38 EVVICQRCYRLKHY----NEVQDVSLTDDDFLRILNQL------GARDGLVVKVVDIFDF 87
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
DG + + + + ++L+G KVDLLP V ++ W++ AK
Sbjct: 88 DGSWLNGLQRYVGEN---------------PVLLIGNKVDLLPKSVKRPKVIHWMKRAAK 132
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+L+SA GV I+E + +V++ G+ N GKST IN K+ G
Sbjct: 133 EKGLKPVD-VHLMSAETGEGVLEAADLIEEYRNGK-DVFIAGSTNTGKSTFINRLLKEYG 190
Query: 424 VKVS-KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+T + IPGTTL ++ + L + LYDTPG+++ H M+ R++R K + RK
Sbjct: 191 AADELMITTSNIPGTTLDMIDVP--LDDGSSLYDTPGIINTHQMAHRVDRSTLKTILPRK 248
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P+ +++ Q++ GL R+D + ++ V+ S ++ +H K+E AD +++
Sbjct: 249 EVKPKIFQLSEEQSIFFAGLGRIDFLKGDRQSF--IVFMSNDLYIHRTKLEKADRLYETQ 306
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNG--IDIAAAGLGWFSLGLKGEASLT 600
+G +L PP G SEL + K K W V+ DI +GLGW ++ G A +
Sbjct: 307 LGDQLSPPSG----SELDHFPPLKRK----EWKVDAGKFDIVYSGLGWVTVDGPG-AIVA 357
Query: 601 LWTYDGIEITLREPL 615
+ +G+E+++R L
Sbjct: 358 SYVPEGVEVSIRPSL 372
>gi|357636021|ref|ZP_09133896.1| ribosome biogenesis GTPase YqeH [Streptococcus macacae NCTC 11558]
gi|357584475|gb|EHJ51678.1| ribosome biogenesis GTPase YqeH [Streptococcus macacae NCTC 11558]
Length = 368
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 193/385 (50%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GE+ C RC LR+Y N++ + + D DF +++ G++NA
Sbjct: 26 KSALEKGLESGEL-YCQRCFRLRHY----NDIMDVHLSDDDF-----LKILHEVGDSNA- 74
Query: 293 VVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV VVD DF+G + P ++ D L+LVG K D+LP V
Sbjct: 75 LVVNVVDIFDFNGSVIPG------LQRFISGND----------LLLVGNKSDILPRSVKT 118
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
+++ +W+ RA G L+ V L SA+ +++L+A I+ R +V+V+G N GK
Sbjct: 119 SKVRQWLTERAHEEGLHPLD-VMLTSAQNKQAIKDLIAAIETFRQGR-DVYVVGVTNVGK 176
Query: 412 STLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
STLIN ++ +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 177 STLINAMIQELTGDKDVITASRFPGTTLDKIEIP--LDDGSYIFDTPGIIHRHQMAHYLS 234
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
+ K + +KEL+P+TY++ Q + +GGL R D + + T + N+ LH K
Sbjct: 235 AKDLKYINPKKELKPKTYQLNAEQTLFLGGLARFDFIEGERQGF--TAYFDNNLKLHRTK 292
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ AD + HVG L PP ++ A+ +L++ + D+ +GLGW +
Sbjct: 293 LAFADAFYDKHVGSLLTPPDKKEVAA-FPQLVRHELRIEEKT------DLVFSGLGW--I 343
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
KG A L W G+ + R+ L+
Sbjct: 344 CAKGPARLAAWAPKGVAVVTRKALI 368
>gi|148544461|ref|YP_001271831.1| GTP-binding protein YqeH [Lactobacillus reuteri DSM 20016]
gi|184153826|ref|YP_001842167.1| GTP-binding protein YqeH [Lactobacillus reuteri JCM 1112]
gi|227363111|ref|ZP_03847246.1| GTP-binding protein YqeH [Lactobacillus reuteri MM2-3]
gi|325682783|ref|ZP_08162299.1| GTP-binding protein [Lactobacillus reuteri MM4-1A]
gi|148531495|gb|ABQ83494.1| Nitric-oxide synthase [Lactobacillus reuteri DSM 20016]
gi|183225170|dbj|BAG25687.1| GTPase [Lactobacillus reuteri JCM 1112]
gi|227071829|gb|EEI10117.1| GTP-binding protein YqeH [Lactobacillus reuteri MM2-3]
gi|324977133|gb|EGC14084.1| GTP-binding protein [Lactobacillus reuteri MM4-1A]
Length = 375
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 192/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E KE GE+ C RC LR+Y NE+A + D DF RL+ +ANA
Sbjct: 33 KSALEKGKETGEL-YCQRCFRLRHY----NEIAPVSLTDDDF-----LRLLNQIRDANA- 81
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG K DLLP +
Sbjct: 82 LIVYVVDVFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKEDLLPRSLRRP 126
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L W+R +A G ++ V LVSA+K+ + +LL I++ R +V+V+G N GKS
Sbjct: 127 KLTDWIRQQANIAGLRPIDTV-LVSAKKNHQIDHLLDVIEKYRHNR-DVYVVGVTNVGKS 184
Query: 413 TLINTFAK-KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
TLIN K + GVK +T + PGTTL + I L L DTPG++H M+ L+
Sbjct: 185 TLINQIIKQRTGVK-ELITTSRFPGTTLDKIEIP--LDDGHVLVDTPGIIHQEQMAHVLS 241
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
+ K+V +KE++P+TY++ GQ + +GG+ R D E + + N+ +H K
Sbjct: 242 PKDLKIVAPQKEIKPKTYQLNDGQTLFLGGVARFDYLHG--ERAGMVAYFDNNLPIHRTK 299
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ NAD + H+G L PP D +E + + ++ S DI GLGW ++
Sbjct: 300 LNNADNFYAKHLGDLLTPPTS-DEKNEFPPLERYEFHITEKS------DIVFEGLGWITV 352
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
K ++ W G+ +R ++
Sbjct: 353 PAK--TTVAAWVPKGVGALVRRAMI 375
>gi|315641160|ref|ZP_07896238.1| GTP-binding protein [Enterococcus italicus DSM 15952]
gi|315483084|gb|EFU73602.1| GTP-binding protein [Enterococcus italicus DSM 15952]
Length = 375
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 196/384 (51%), Gaps = 45/384 (11%)
Query: 237 EAQKEKG---EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGV 293
+A EKG E C RC LR+Y NE+ + + D DF +L+ G +A +
Sbjct: 33 KAAIEKGLENEEMYCQRCFRLRHY----NEIQDVALTDNDF-----LQLLNEIGKTDA-L 82
Query: 294 VVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTR 353
+V VVD DF+G SL L D + ++VG KVD+LP + +
Sbjct: 83 IVNVVDIFDFNG--------SLIPGLHRFVGDNPI-------IMVGNKVDVLPKSLKKPK 127
Query: 354 LDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
L +W++ RA G + V L SA+K+ + LLA I++ R +V+++G N GKST
Sbjct: 128 LIQWMKERAFEEGLRPVE-VLLTSAKKNQEITRLLATIEQYRKGR-DVYIVGVTNVGKST 185
Query: 414 LINTFAKK-EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
LIN ++ GVK +T + PGTTL + I L A + DTPG++H H M+ L +
Sbjct: 186 LINQIIQQATGVK-ELITTSRFPGTTLDKIEIP--LEDGAVMIDTPGIIHRHQMAHYLGK 242
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K+V +KE++P+TY+++ Q + +GG+ R D + E T + + ++ +H K+
Sbjct: 243 KDLKIVAPQKEIKPKTYQLQPQQTLFLGGIARFDFIKG--EKSSFTAYLANDLLIHRTKL 300
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
E AD ++ HVG LQPP +D +E + + S D+ AGLGW ++
Sbjct: 301 EKADAFYEKHVGRLLQPP-AEDELAEFPELVRFEFSIKERS------DLVFAGLGWITIT 353
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
G + W G+ + +R+ L+
Sbjct: 354 KPG--VIAGWAPKGVNVVIRKALI 375
>gi|423335620|ref|ZP_17313395.1| GTPase [Lactobacillus reuteri ATCC 53608]
gi|337728850|emb|CCC03969.1| GTPase [Lactobacillus reuteri ATCC 53608]
Length = 375
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 192/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E KE GE+ C RC LR+Y NE+A + D DF RL+ +ANA
Sbjct: 33 KSALEKGKETGEL-YCQRCFRLRHY----NEIAPVSLTDDDF-----LRLLNQIRDANA- 81
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG K DLLP +
Sbjct: 82 LIVYVVDVFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKEDLLPRSLRRP 126
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L W+R +A G ++ V LVSA+K+ + +LL I++ R +V+V+G N GKS
Sbjct: 127 KLTDWIRQQANIAGLRPIDTV-LVSAKKNHQIDHLLDVIEKYRHNR-DVYVVGVTNVGKS 184
Query: 413 TLINTFAK-KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
TLIN K + GVK +T + PGTTL + I L L DTPG++H M+ L+
Sbjct: 185 TLINQIIKQRTGVK-ELITTSRFPGTTLDKIEIP--LDDGHVLVDTPGIIHQEQMAHVLS 241
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
+ K+V +KE++P+TY++ GQ + +GG+ R D E + + N+ +H K
Sbjct: 242 PKDLKIVAPQKEIKPKTYQLNDGQTLFLGGVARFDYLHG--ERAGMVAYFDNNLPIHRTK 299
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ NAD + H+G L PP D +E + + ++ S DI GLGW ++
Sbjct: 300 LSNADNFYAKHLGDLLTPPTS-DEKNEFPPLERYEFHITEKS------DIVFEGLGWITV 352
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
K ++ W G+ +R ++
Sbjct: 353 PAK--TTVAAWVPKGVGALVRRAMI 375
>gi|425050125|ref|ZP_18453893.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 509]
gi|403024624|gb|EJY36769.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 509]
Length = 369
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 190/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E GEV C RC LR+Y NE+ + + D DF RL+ G +A
Sbjct: 27 QTALEKGLASGEV-YCQRCFRLRHY----NEIQDVSLTDDDF-----LRLLNELGQKDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP + T
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKVDILPKSLKKT 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L +W++ RA G ++ V L SA+K + LL I+E R +V+++G N GKS
Sbjct: 121 KLTQWMKERAYEAGIRPVD-VLLTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIKNTAGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ +++ KE++P+ Y++ GQ + +GGL R D + + + S +V++H K+
Sbjct: 237 KDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSNDVNIHRTKL 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
E ADE ++ HVG LQPP R E+ + + + + V DI AGLGW +
Sbjct: 295 EKADEFYQKHVGGLLQPP----RPDEVEAFPE----LVRFEFSVKEKTDIVFAGLGWIT- 345
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ + W G+++ R+ L+
Sbjct: 346 -VTAPVVIAGWAPKGVDVLKRKALI 369
>gi|408356444|ref|YP_006844975.1| GTP-binding protein [Amphibacillus xylanus NBRC 15112]
gi|407727215|dbj|BAM47213.1| putative GTP-binding protein [Amphibacillus xylanus NBRC 15112]
Length = 369
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 181/354 (51%), Gaps = 45/354 (12%)
Query: 242 KGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDC 300
+ EV +C RC L+NY NEV + D DF +++ S AN ++V +VD
Sbjct: 33 ENEVIICQRCFRLKNY----NEVQDVPYTDGDFLQMV-------SQIANTKSLIVKMVDI 81
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G F + L + K+ +++G KVDLLP + +R+ +W++
Sbjct: 82 FDFNGSF--------IRGLHRLTGNNKV-------IIIGNKVDLLPKSTNLSRVRQWIKK 126
Query: 361 RAKAGGAPKLNGVYLVSARKDLG---VRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
A G + VYL+SA+ G V+ + + +E +V+V+G+ N GKST IN
Sbjct: 127 EAADLGV-TVQDVYLISAKTGQGFDEVKQAIEYHRE----GQDVYVVGSTNVGKSTFINY 181
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
+T + PGTTLG + I L + LYDTPG+++ + L +++ K+
Sbjct: 182 LINDSVGTKDAITTSYFPGTTLGFIDIP--LDDHSSLYDTPGVVNRGQLVHYLAKEDIKL 239
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
+ KE++PRTY++ Q + +GGL R D + ++ T + V LH K+E AD+
Sbjct: 240 ITPNKEIKPRTYQLNSQQTLFIGGLARFDFIKGERQSF--TCYFPNRVELHRTKLEKADQ 297
Query: 538 IWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
++ +H+G L PP G++ A + ++ +K+SG +D+ GLGW SL
Sbjct: 298 LYLDHLGTMLTPP-GENTAKDYPKLVEQTIKLSGEK-----VDLVFPGLGWISL 345
>gi|241888775|ref|ZP_04776081.1| ribosome biogenesis GTPase YqeH [Gemella haemolysans ATCC 10379]
gi|241864451|gb|EER68827.1| ribosome biogenesis GTPase YqeH [Gemella haemolysans ATCC 10379]
Length = 372
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 195/370 (52%), Gaps = 36/370 (9%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
VC RC L+NY NEV++ + DF ++I T K + ++V VVD DF G
Sbjct: 39 VCKRCFRLKNY----NEVSDVQLGAEDFYQLIKTLSKKDA------LIVKVVDIFDFSGS 88
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
+ +E+ D +K + VLV K+DLLP V ++ +W+ KA G
Sbjct: 89 W-----------IEDVVDIVGNNKDI---VLVANKLDLLPKSVKQNKVKQWLFKMLKAKG 134
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
K+ + L+SA K+ GV + I EL + +V+++GA N GKST IN +
Sbjct: 135 I-KVKDILLISAIKNQGVEEAASRIDELRNGK-DVYIVGATNVGKSTFINKLIELTTGDK 192
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+ +T + PGTTLG++ I L +YDTPG++ + ++ L+ K+V +KE++
Sbjct: 193 NVITTSHFPGTTLGMIEIP--LDRATSIYDTPGIILDYDIAHYLDAQSLKLVMPKKEIKA 250
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
R +++ Q++ GG+ R+D + ++ T++AS V +H K+ NAD++++ H+G
Sbjct: 251 RVFQLNAEQSLFFGGMARMDFVEGERQSF--TLYASNLVEIHRTKLGNADQLFEKHLGTL 308
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L+PP +D S ++++K S T D +DI +GLGW ++ + + +
Sbjct: 309 LKPPF-EDNISIF----NKQVKKSFT-IDSRKMDIVISGLGWITVNSDSGCKIDIHVPEE 362
Query: 607 IEITLREPLV 616
IE+ +RE ++
Sbjct: 363 IEVFVRESII 372
>gi|69245736|ref|ZP_00603602.1| GTP-binding protein, HSR1-related [Enterococcus faecium DO]
gi|257880239|ref|ZP_05659892.1| GTP-binding protein YqeH [Enterococcus faecium 1,230,933]
gi|257885285|ref|ZP_05664938.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,501]
gi|257891377|ref|ZP_05671030.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,410]
gi|257893626|ref|ZP_05673279.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,408]
gi|260560463|ref|ZP_05832637.1| GTP-binding protein YqeH [Enterococcus faecium C68]
gi|261208980|ref|ZP_05923385.1| GTP-binding protein YqeH [Enterococcus faecium TC 6]
gi|289565208|ref|ZP_06445660.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium D344SRF]
gi|293563281|ref|ZP_06677731.1| nitric-oxide synthase [Enterococcus faecium E1162]
gi|294619096|ref|ZP_06698591.1| nitric-oxide synthase [Enterococcus faecium E1679]
gi|314939219|ref|ZP_07846473.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133a04]
gi|314942037|ref|ZP_07848895.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133C]
gi|314948390|ref|ZP_07851779.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0082]
gi|314951244|ref|ZP_07854299.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133A]
gi|314991667|ref|ZP_07857137.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133B]
gi|314996793|ref|ZP_07861806.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133a01]
gi|383328631|ref|YP_005354515.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium Aus0004]
gi|389868163|ref|YP_006375586.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium DO]
gi|415896213|ref|ZP_11550763.1| nitric-oxide synthase [Enterococcus faecium E4453]
gi|416138301|ref|ZP_11599017.1| nitric-oxide synthase [Enterococcus faecium E4452]
gi|424793013|ref|ZP_18219180.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium V689]
gi|424901319|ref|ZP_18324838.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R497]
gi|424953629|ref|ZP_18368580.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R494]
gi|424963303|ref|ZP_18377537.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1190]
gi|424970373|ref|ZP_18383892.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1139]
gi|424974410|ref|ZP_18387642.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1137]
gi|424979477|ref|ZP_18392326.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1123]
gi|424982654|ref|ZP_18395295.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV99]
gi|424991594|ref|ZP_18403734.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV26]
gi|425007563|ref|ZP_18418686.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV1]
gi|425014430|ref|ZP_18425105.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E417]
gi|425019732|ref|ZP_18430073.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C497]
gi|425022790|ref|ZP_18432945.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C1904]
gi|425034138|ref|ZP_18439049.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 514]
gi|425040464|ref|ZP_18444932.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 513]
gi|425043017|ref|ZP_18447289.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 511]
gi|425044850|ref|ZP_18448978.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 510]
gi|425052567|ref|ZP_18456167.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 506]
gi|425059881|ref|ZP_18463197.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 503]
gi|430831715|ref|ZP_19449764.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0333]
gi|430848438|ref|ZP_19466255.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1133]
gi|430850943|ref|ZP_19468699.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1185]
gi|430853384|ref|ZP_19471112.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1258]
gi|430857116|ref|ZP_19474787.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1392]
gi|431301203|ref|ZP_19507522.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1626]
gi|431538220|ref|ZP_19517570.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1731]
gi|431679745|ref|ZP_19524501.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1904]
gi|431749190|ref|ZP_19537934.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2297]
gi|431754258|ref|ZP_19542922.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2883]
gi|431769159|ref|ZP_19557585.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1321]
gi|431770242|ref|ZP_19558645.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1644]
gi|431773801|ref|ZP_19562117.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2369]
gi|431779479|ref|ZP_19567674.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E4389]
gi|68195629|gb|EAN10069.1| GTP-binding protein, HSR1-related [Enterococcus faecium DO]
gi|257814467|gb|EEV43225.1| GTP-binding protein YqeH [Enterococcus faecium 1,230,933]
gi|257821137|gb|EEV48271.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,501]
gi|257827737|gb|EEV54363.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,410]
gi|257830005|gb|EEV56612.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,408]
gi|260073465|gb|EEW61793.1| GTP-binding protein YqeH [Enterococcus faecium C68]
gi|260077019|gb|EEW64741.1| GTP-binding protein YqeH [Enterococcus faecium TC 6]
gi|289163029|gb|EFD10877.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium D344SRF]
gi|291594757|gb|EFF26139.1| nitric-oxide synthase [Enterococcus faecium E1679]
gi|291604733|gb|EFF34217.1| nitric-oxide synthase [Enterococcus faecium E1162]
gi|313589088|gb|EFR67933.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133a01]
gi|313593758|gb|EFR72603.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133B]
gi|313596596|gb|EFR75441.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133A]
gi|313599163|gb|EFR78008.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133C]
gi|313641470|gb|EFS06050.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0133a04]
gi|313645182|gb|EFS09762.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX0082]
gi|364091097|gb|EHM33601.1| nitric-oxide synthase [Enterococcus faecium E4452]
gi|364091181|gb|EHM33679.1| nitric-oxide synthase [Enterococcus faecium E4453]
gi|378938325|gb|AFC63397.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium Aus0004]
gi|388533412|gb|AFK58604.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium DO]
gi|402916877|gb|EJX37709.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium V689]
gi|402930713|gb|EJX50343.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R497]
gi|402938628|gb|EJX57616.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R494]
gi|402949758|gb|EJX67797.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1190]
gi|402956415|gb|EJX73877.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1137]
gi|402957907|gb|EJX75265.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1123]
gi|402960308|gb|EJX77464.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV99]
gi|402962021|gb|EJX79003.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1139]
gi|402976381|gb|EJX92277.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV26]
gi|402994712|gb|EJY09225.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV1]
gi|402998680|gb|EJY12924.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E417]
gi|403010909|gb|EJY24250.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C497]
gi|403011880|gb|EJY25159.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C1904]
gi|403012771|gb|EJY25951.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 513]
gi|403021277|gb|EJY33745.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 514]
gi|403021500|gb|EJY33956.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 511]
gi|403028500|gb|EJY40320.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 510]
gi|403033853|gb|EJY45337.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 506]
gi|403043186|gb|EJY54110.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 503]
gi|430481096|gb|ELA58261.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E0333]
gi|430534700|gb|ELA75135.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1185]
gi|430534881|gb|ELA75313.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1133]
gi|430540465|gb|ELA80667.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1258]
gi|430542841|gb|ELA82934.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1392]
gi|430580393|gb|ELB18860.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1626]
gi|430594762|gb|ELB32725.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1731]
gi|430598810|gb|ELB36538.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1904]
gi|430611952|gb|ELB49019.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2297]
gi|430619865|gb|ELB56677.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2883]
gi|430627934|gb|ELB64398.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1321]
gi|430635135|gb|ELB71233.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2369]
gi|430635995|gb|ELB72074.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1644]
gi|430642334|gb|ELB78115.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E4389]
Length = 369
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 190/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E GEV C RC LR+Y NE+ + + D DF RL+ G +A
Sbjct: 27 QTALEKGLASGEV-YCQRCFRLRHY----NEIQDVSLTDDDF-----LRLLNELGQKDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP + T
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKVDILPKSLKKT 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L +W++ RA G ++ V L SA+K + LL I+E R +V+++G N GKS
Sbjct: 121 KLTQWMKERAYEAGIRPVD-VLLTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIKNTAGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ +++ KE++P+ Y++ GQ + +GGL R D + + + S +V++H K+
Sbjct: 237 KDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSNDVNIHRTKL 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
E ADE ++ HVG LQPP R E+ + + + + V DI AGLGW +
Sbjct: 295 EKADEFYQKHVGGLLQPP----RPDEVEAFPE----LVRFEFSVKEKTDIVFAGLGWIT- 345
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ + W G+++ R+ L+
Sbjct: 346 -VTAPVVIAGWAPKGVDVLKRKALI 369
>gi|229552536|ref|ZP_04441261.1| GTP-binding protein [Lactobacillus rhamnosus LMS2-1]
gi|258539909|ref|YP_003174408.1| GTP-binding protein YqeH [Lactobacillus rhamnosus Lc 705]
gi|385835558|ref|YP_005873332.1| ribosome biogenesis GTPase YqeH [Lactobacillus rhamnosus ATCC 8530]
gi|229314088|gb|EEN80061.1| GTP-binding protein [Lactobacillus rhamnosus LMS2-1]
gi|257151585|emb|CAR90557.1| GTP-binding protein [Lactobacillus rhamnosus Lc 705]
gi|355395049|gb|AER64479.1| ribosome biogenesis GTPase YqeH [Lactobacillus rhamnosus ATCC 8530]
Length = 374
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 190/384 (49%), Gaps = 44/384 (11%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A A+ E + C RC LR+Y NE+A + D DF RL+ G +NA ++
Sbjct: 33 ATLAKAEADDDIYCQRCFRLRHY----NEIAPVTLTDDDF-----LRLLNAIGESNA-LI 82
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
V V+D DF+G S+ L D + +LVG K D+LP ++P +L
Sbjct: 83 VNVIDIFDFNG--------SVIPGLHRFVGDNPV-------ILVGNKADVLPKSLNPNKL 127
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
W++ +AKA G + + L SA+K GV LL I++ R +V+V+G N GKSTL
Sbjct: 128 KNWLQQQAKAQGLRPVTTL-LASAKKGFGVDELLTAIEKYREHR-DVYVVGVTNTGKSTL 185
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN K+ +T + PGTTL RI L L DTPG++H H M+ + +
Sbjct: 186 INRIIKQLTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRHQMAHFVGSKD 243
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
K+V ++P TY++ GQ + +GGL R D + ++ ++A + LH K+ N
Sbjct: 244 LKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRQSF--VIYADTQLPLHRTKLIN 301
Query: 535 ADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
ADE ++ HVG L PP +A E+ +D V D+ AGLGW ++
Sbjct: 302 ADEFYQKHVGGLLAPP----QADEV---RDFPPLVRFEFTPKEKSDLVFAGLGWITV--- 351
Query: 595 GEASLTLWTY--DGIEITLREPLV 616
A +T+ Y G+++ LR+ +
Sbjct: 352 -PAGVTIAGYAPKGVDVLLRKAFI 374
>gi|329767815|ref|ZP_08259331.1| ribosome biogenesis GTPase YqeH [Gemella haemolysans M341]
gi|328838916|gb|EGF88510.1| ribosome biogenesis GTPase YqeH [Gemella haemolysans M341]
Length = 372
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 189/370 (51%), Gaps = 36/370 (9%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
VC RC L+NY NEV++ + DF ++I T K + ++V VVD DF G
Sbjct: 39 VCKRCFRLKNY----NEVSDVQLGAEDFYQLIKTLSKKDA------LIVKVVDIFDFSGS 88
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
+ +E+ D +K + VLV K+DLLP V ++ +W+ KA G
Sbjct: 89 W-----------IEDVVDIVGNNKDI---VLVANKLDLLPKSVKQNKVKQWLFKMLKAKG 134
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
K+ + L+SA K+ GV + I EL + +V+++GA N GKST IN +
Sbjct: 135 I-KVKDILLISAIKNQGVEEAASRIDELRNGK-DVYIVGATNVGKSTFINKLIELTTGDK 192
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+ +T + PGTTLG++ I L +YDTPG++ + ++ L+ K+V +KE++
Sbjct: 193 NVITTSHFPGTTLGMIEIP--LDRATSIYDTPGIILDYDIAHYLDAQSLKLVMPKKEIKA 250
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
R +++ Q++ GG+ R+D + ++ T++AS V +H K+ NAD +++ H+G
Sbjct: 251 RVFQLNAEQSLFFGGMARMDFVEGERQSF--TLYASNLVEIHRTKLSNADALFEKHLGTL 308
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L+PP +D S + + D +DI +GLGW ++ + + +
Sbjct: 309 LKPPF-EDNISIFNNQVKKSFTI-----DSRKMDIVISGLGWITVNSDSGCKIDIHVPEE 362
Query: 607 IEITLREPLV 616
IE+ +RE ++
Sbjct: 363 IEVFVRESII 372
>gi|420143153|ref|ZP_14650656.1| GTP-binding protein [Lactococcus garvieae IPLA 31405]
gi|391856958|gb|EIT67492.1| GTP-binding protein [Lactococcus garvieae IPLA 31405]
Length = 368
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 191/379 (50%), Gaps = 40/379 (10%)
Query: 238 AQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMV 297
A++ + + C RC LR+Y NE+A+ + D DF RL+ G +A ++V V
Sbjct: 30 AKRGEDDALYCQRCFRLRHY----NEIADVSLTDDDF-----LRLLSEIGEHDA-LIVNV 79
Query: 298 VDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
VD DF+G SL L + L +LV K D+LP + ++ W
Sbjct: 80 VDIFDFNG--------SLIPSLHRFTGNNDL-------LLVANKKDILPHSLKVGKMSAW 124
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
++ +AK G L+ V + SA+ VR L+ I+++ R +V+V+G N GKSTLIN
Sbjct: 125 LKEQAKRAGLRPLD-VLVTSAKNQDDVRELMEKIEKMRKGR-DVYVVGVTNVGKSTLINA 182
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
K + +T + PGTTL + I L + L DTPG++H M+ L + K+
Sbjct: 183 IIKLVTGDDNVITTSRFPGTTLDKIEIP--LDDDSLLIDTPGIIHRGQMAHYLEAKDLKL 240
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
V +KE++P+TY++ GQ + +GGL R D Q + + TV+ + +H K+E A E
Sbjct: 241 VSPKKEIKPKTYQLNAGQTLFLGGLARFDYIQGEKQGL--TVFCDNELDIHRTKLEGATE 298
Query: 538 IWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEA 597
++ H G LQPP ++ S+ ++ V S DI +GLGW + +G
Sbjct: 299 FYEKHAGGLLQPPRAKN-LSDFPKLIRKEFSVKEKS------DIVFSGLGWIRVAERG-- 349
Query: 598 SLTLWTYDGIEITLREPLV 616
+ W +G+++ LR+ LV
Sbjct: 350 VVAAWVPEGVDVVLRKALV 368
>gi|403384197|ref|ZP_10926254.1| GTPase YqeH [Kurthia sp. JC30]
Length = 368
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 185/376 (49%), Gaps = 38/376 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
EK + +C RC L+NY NE+ + D DF R++ G++V +VD
Sbjct: 31 EKSDEIICKRCFRLKNY----NELQPVSLTDDDFLRILN------GLGTQKGLIVKIVDI 80
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G S L + + +L+ KVDLLP ++P ++ W+RH
Sbjct: 81 FDFNG--------SWLPGLHRFVGNNPV-------LLIANKVDLLPKSINPKKVINWLRH 125
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
AK G ++ V LVSA K GV+ +A I E +V+V+G N GKST IN K
Sbjct: 126 EAKQLGLKPVD-VLLVSAHKGTGVQEAMAKIDEYRDGE-DVYVVGCTNVGKSTFINRIIK 183
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ + +T + PGTTL ++ I L + ++DTPG+++ H M+ ++ E K +
Sbjct: 184 QATGQGDIITTSYFPGTTLDMIEIP--LDDEKAIFDTPGIINHHQMAHYIDPSELKYITP 241
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+T+++ Q + +G L R D Q TV S +++H K+E ADE+++
Sbjct: 242 KKEIKPKTFQLNAEQTLFIGALARFDFIQGMRSNF--TVHISNELNIHRTKLERADELYE 299
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H G L PP S+ + KL S DI +GLGW ++ + +
Sbjct: 300 THKGELLAPP------SKQFIEQLPKLVRHEFSIKEGKTDIVFSGLGWITVQ-NPDVVIA 352
Query: 601 LWTYDGIEITLREPLV 616
+ +G+E+ LR L+
Sbjct: 353 AYAPEGVEVMLRPSLI 368
>gi|403668289|ref|ZP_10933564.1| GTPase YqeH [Kurthia sp. JC8E]
Length = 367
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 189/377 (50%), Gaps = 41/377 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
EK E+ +C RC L+NY NE+ + D DF R++ G++V +VD
Sbjct: 31 EKEEI-ICKRCFRLKNY----NELQPVSLTDDDFLRILN------GLGTQKGLIVKIVDI 79
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF G S L + + +L+ KVDLLP ++P ++ W+R
Sbjct: 80 FDFTG--------SWLPGLHRFVGNNPV-------LLIANKVDLLPKSINPKKVINWIRQ 124
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRG-NVWVIGAQNAGKSTLINTFA 419
AK G ++ V LVSA K G+ + I+E RG +V+V+G N GKST IN
Sbjct: 125 EAKQLGLKPVD-VLLVSAHKGNGIEEAMEKIEEYR--RGEDVYVVGCTNVGKSTFINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + +T + PGTTL ++ I L + +YDTPG+++ H M+ ++ E K +
Sbjct: 182 KQATGQGDVITTSYFPGTTLDMIEIP--LDDEKAIYDTPGIINHHQMAHHIDAKELKYIM 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P+T+++ Q + +G L R D Q TV + ++++H K+ENADE++
Sbjct: 240 PKKEIKPKTFQLNAEQTLFIGALARFDFIQGHRSNF--TVHIANDLNIHRTKLENADELY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ H G L PP ++ +L + + + IDI +GLGW ++ +
Sbjct: 298 ETHKGELLAPPT-KEFIDQLPPLVRHEFSIKE-----DKIDIVYSGLGWITVQ-NANVVV 350
Query: 600 TLWTYDGIEITLREPLV 616
+ +G+E+T+R L+
Sbjct: 351 AAYAPEGVEVTIRPSLI 367
>gi|227550575|ref|ZP_03980624.1| GTP-binding protein [Enterococcus faecium TX1330]
gi|257888600|ref|ZP_05668253.1| GTP-binding protein YqeH [Enterococcus faecium 1,141,733]
gi|257897022|ref|ZP_05676675.1| GTP-binding protein YqeH [Enterococcus faecium Com12]
gi|257898963|ref|ZP_05678616.1| GTP-binding protein YqeH [Enterococcus faecium Com15]
gi|293378715|ref|ZP_06624873.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium PC4.1]
gi|424763232|ref|ZP_18190711.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX1337RF]
gi|425055202|ref|ZP_18458687.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 505]
gi|431030888|ref|ZP_19490597.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1590]
gi|431595404|ref|ZP_19522164.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1861]
gi|431751398|ref|ZP_19540088.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2620]
gi|431758519|ref|ZP_19547146.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3083]
gi|431763994|ref|ZP_19552541.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3548]
gi|227180283|gb|EEI61255.1| GTP-binding protein [Enterococcus faecium TX1330]
gi|257824654|gb|EEV51586.1| GTP-binding protein YqeH [Enterococcus faecium 1,141,733]
gi|257833587|gb|EEV60008.1| GTP-binding protein YqeH [Enterococcus faecium Com12]
gi|257836875|gb|EEV61949.1| GTP-binding protein YqeH [Enterococcus faecium Com15]
gi|292642643|gb|EFF60795.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium PC4.1]
gi|402423043|gb|EJV55263.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium TX1337RF]
gi|403034406|gb|EJY45858.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 505]
gi|430565063|gb|ELB04233.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1590]
gi|430590638|gb|ELB28694.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E1861]
gi|430615514|gb|ELB52463.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2620]
gi|430617577|gb|ELB54450.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3083]
gi|430621450|gb|ELB58212.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E3548]
Length = 369
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 190/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E GEV C RC LR+Y NE+ + + D DF RL+ G +A
Sbjct: 27 QTALEKGLASGEV-YCQRCFRLRHY----NEIQDVSLTDDDF-----LRLLNELGQKDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP +
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKVDILPKSLKKP 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L +W++ RA G ++ V L SA+K + LL I+E R +V+++G N GKS
Sbjct: 121 KLTQWMKERAHEAGIRPVD-VLLTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIKNTAGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ +++ KE++P+ Y++ GQ + +GGL R D + + + S +V++H K+
Sbjct: 237 KDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSNDVNIHRTKL 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
E ADE ++ HVG LQPP R E+ + + + + V DI AGLGW +
Sbjct: 295 EKADEFYQKHVGGLLQPP----RPDEVEAFPE----LVRFEFSVKEKTDIVFAGLGWIT- 345
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ A + W G+++ R+ L+
Sbjct: 346 -VTAPAVIAGWAPKGVDVLKRKALI 369
>gi|427392284|ref|ZP_18886289.1| ribosome biogenesis GTPase YqeH [Alloiococcus otitis ATCC 51267]
gi|425731551|gb|EKU94367.1| ribosome biogenesis GTPase YqeH [Alloiococcus otitis ATCC 51267]
Length = 381
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 182/369 (49%), Gaps = 40/369 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+A+ + DF ++ + +VV VVD +D +G F
Sbjct: 53 CKRCFRLRHY----NELADVQVTSDDFLNMLGEI------SQEEALVVNVVDILDVNGSF 102
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
+L+ P L++VG K DLLP + +L +W+ + G
Sbjct: 103 --------------VPGIGRLTGNNP-LIIVGNKFDLLPKSLKRGKLRQWLEEVSYDMGV 147
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L V L+SA + V +LL I E G R +V+++G N GKSTLIN +
Sbjct: 148 KPL-AVDLISAVRQGSVAHLLDLINEYRGDR-DVYIVGTTNVGKSTLINQIINLASQEED 205
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTLG + I L KL DTPG+ P + +LN E K V RKEL+PR
Sbjct: 206 VVTTSYFPGTTLGKIEIP--LDDGHKLVDTPGIFRPGQVVHQLNPQEVKTVIPRKELKPR 263
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ GQ++ +GGL R D Q + + V+A+P++S+H K E AD+++++ +G L
Sbjct: 264 TYQLNPGQSLFIGGLGRFDYVQGPGKA-SIVVYAAPSLSIHRTKREKADDLYQSQLGKDL 322
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
PP + + T R KV S D+ +GLGW + G + G
Sbjct: 323 TPPFD---SKDKKTLTKRTFKVDQAS------DLVYSGLGWVKINASG-VEVEGHIIQGA 372
Query: 608 EITLREPLV 616
+I +R+P++
Sbjct: 373 DIFIRKPMI 381
>gi|418008288|ref|ZP_12648155.1| GTP-binding protein [Lactobacillus casei UW4]
gi|410546966|gb|EKQ21209.1| GTP-binding protein [Lactobacillus casei UW4]
Length = 374
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 188/385 (48%), Gaps = 44/385 (11%)
Query: 234 KAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGV 293
KA ++ + + C RC LR+Y NE+A + D DF RL+ G +NA +
Sbjct: 32 KATLSKADPDDEIYCQRCFRLRHY----NEIAPVTLTDDDF-----LRLLNAIGESNA-L 81
Query: 294 VVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTR 353
+V V+D DF+G S+ L D + +LVG K D+LP ++P R
Sbjct: 82 IVNVIDIFDFNG--------SIIPGLHRFVGDNPV-------ILVGNKADVLPKSLNPNR 126
Query: 354 LDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
L W++ +AKA G + L SA+K GV LL I++ R +V+V+G N GKST
Sbjct: 127 LKNWLQQQAKAQGLRPV-ATMLASAKKGFGVDELLDAIEKYRDHR-DVYVVGVTNTGKST 184
Query: 414 LINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
LIN K+ +T + PGTTL RI L L DTPG++H H M+ +
Sbjct: 185 LINRIIKELTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRHQMAHFVGPK 242
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIE 533
+ K+V ++P TY++ GQ + +GGL R D + + V+ ++LH K+E
Sbjct: 243 DLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRNSF--VVYTDNQLTLHRTKLE 300
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGL 593
NAD+ ++ HVG L PP +A E+ D V D+ AGLGW ++
Sbjct: 301 NADDFYQKHVGRLLSPP----QADEV---PDFPPLVRFEFTPKEKADLVFAGLGWITV-- 351
Query: 594 KGEASLTLWTY--DGIEITLREPLV 616
A +T+ Y G+++ LR +
Sbjct: 352 --PAGVTVAGYAPKGVDVLLRRAFI 374
>gi|315222440|ref|ZP_07864341.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus F0211]
gi|315188464|gb|EFU22178.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus F0211]
Length = 368
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 190/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + + D DF RL+ G++NA
Sbjct: 26 QSALEKGMETGEL-YCQRCFRLRHY----NEITDVQLTDDDF-----LRLLHEVGDSNA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ ++ L+ I++ R +V+V+G N
Sbjct: 116 VKTSKVAQWLTERAHEEGLRPVD-VVLTSAQNKQAIKELIEKIEQYRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKEIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K + +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+ A E ++ HVG L PP + S+ +LK+ + D+ +GLGW
Sbjct: 290 RTKLAGAGEFYEKHVGSLLTPP-SKKEVSDFPQLVKHELKIEAKT------DVVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ + G A + W DG+ + +R+ ++
Sbjct: 343 --IRVTGPAKIAAWAPDGVAVVIRKAII 368
>gi|199597217|ref|ZP_03210649.1| Predicted GTPase [Lactobacillus rhamnosus HN001]
gi|258508733|ref|YP_003171484.1| GTP-binding protein YqeH [Lactobacillus rhamnosus GG]
gi|385828394|ref|YP_005866166.1| GTP-binding protein [Lactobacillus rhamnosus GG]
gi|199592021|gb|EDZ00096.1| Predicted GTPase [Lactobacillus rhamnosus HN001]
gi|257148660|emb|CAR87633.1| GTP-binding protein [Lactobacillus rhamnosus GG]
gi|259650039|dbj|BAI42201.1| GTP-binding protein [Lactobacillus rhamnosus GG]
Length = 374
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 190/384 (49%), Gaps = 44/384 (11%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A A+ E + C RC LR+Y NE+A + D DF RL+ G +NA ++
Sbjct: 33 ATLAKAEADDDIYCQRCFRLRHY----NEIAPVTLTDDDF-----LRLLNAIGESNA-LI 82
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
V V+D DF+G S+ L D + +LVG K D+LP ++P +L
Sbjct: 83 VNVIDIFDFNG--------SVIPGLHRFVGDNPV-------ILVGNKADVLPKSLNPNKL 127
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
W++ +AKA G + + L SA+K GV LL I++ R +V+V+G N GKSTL
Sbjct: 128 KNWLQQQAKAQGLRPVTTL-LASAKKGFGVDELLTAIEKYREHR-DVYVVGVTNTGKSTL 185
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN K+ +T + PGTTL RI L L DTPG++H H M+ + +
Sbjct: 186 INRIIKQLTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRHQMAHFVGPKD 243
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
K+V ++P TY++ GQ + +GGL R D + ++ ++A + LH K+ N
Sbjct: 244 LKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRQSF--VIYADTQLPLHRTKLIN 301
Query: 535 ADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
ADE ++ HVG L PP +A E+ +D V D+ AGLGW ++
Sbjct: 302 ADEFYQRHVGGLLAPP----QADEV---RDFPPLVRFEFTPKEKSDLVFAGLGWITV--- 351
Query: 595 GEASLTLWTY--DGIEITLREPLV 616
A +T+ Y G+++ LR+ +
Sbjct: 352 -PAGVTIAGYAPKGVDVLLRKAFI 374
>gi|424993575|ref|ZP_18405561.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV168]
gi|402982222|gb|EJX97701.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV168]
Length = 369
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 189/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E GEV C RC LR+Y NE + + D DF RL+ G +A
Sbjct: 27 QTALEKGLASGEV-YCQRCFRLRHY----NETQDVSLTDDDF-----LRLLNELGQKDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP + T
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKVDILPKSLKKT 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L +W++ RA G ++ V L SA+K + LL I+E R +V+++G N GKS
Sbjct: 121 KLTQWMKERAYEAGIRPVD-VLLTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIKNTAGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ +++ KE++P+ Y++ GQ + +GGL R D + + + S +V++H K+
Sbjct: 237 KDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSNDVNIHRTKL 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
E ADE ++ HVG LQPP R E+ + + + + V DI AGLGW +
Sbjct: 295 EKADEFYQKHVGGLLQPP----RPDEVEAFPE----LVRFEFSVKEKTDIVFAGLGWIT- 345
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ + W G+++ R+ L+
Sbjct: 346 -VTAPVVIVGWAPKGVDVLKRKALI 369
>gi|257883040|ref|ZP_05662693.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,502]
gi|294621391|ref|ZP_06700563.1| nitric-oxide synthase [Enterococcus faecium U0317]
gi|424802804|ref|ZP_18228264.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium S447]
gi|424856100|ref|ZP_18280363.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R499]
gi|424949331|ref|ZP_18365015.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R496]
gi|424957745|ref|ZP_18372453.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R446]
gi|424962572|ref|ZP_18376901.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1986]
gi|424967486|ref|ZP_18381182.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1140]
gi|424997646|ref|ZP_18409392.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV165]
gi|425002928|ref|ZP_18414329.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV161]
gi|425003344|ref|ZP_18414719.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV102]
gi|425010809|ref|ZP_18421741.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E422]
gi|425017430|ref|ZP_18427934.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C621]
gi|425033754|ref|ZP_18438701.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 515]
gi|431777226|ref|ZP_19565481.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2560]
gi|431783316|ref|ZP_19571434.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E6012]
gi|431785164|ref|ZP_19573195.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E6045]
gi|257818698|gb|EEV46026.1| GTP-binding protein YqeH [Enterococcus faecium 1,231,502]
gi|291599038|gb|EFF30083.1| nitric-oxide synthase [Enterococcus faecium U0317]
gi|402919187|gb|EJX39812.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium S447]
gi|402930526|gb|EJX50173.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R499]
gi|402934665|gb|EJX53986.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R496]
gi|402940056|gb|EJX58914.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1986]
gi|402942813|gb|EJX61369.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium R446]
gi|402954340|gb|EJX71973.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium P1140]
gi|402981963|gb|EJX97464.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV161]
gi|402985706|gb|EJY00893.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV165]
gi|402992292|gb|EJY07009.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium ERV102]
gi|402998745|gb|EJY12988.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E422]
gi|403004336|gb|EJY18151.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium C621]
gi|403008623|gb|EJY22118.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium 515]
gi|430639710|gb|ELB75576.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E2560]
gi|430645517|gb|ELB81031.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E6012]
gi|430648061|gb|ELB83486.1| ribosome biogenesis GTPase YqeH [Enterococcus faecium E6045]
Length = 369
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 189/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E GEV C RC LR+Y NE + + D DF RL+ G +A
Sbjct: 27 QTALEKGLASGEV-YCQRCFRLRHY----NETQDVSLTDDDF-----LRLLNELGQKDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP + T
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKVDILPKSLKKT 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L +W++ RA G ++ V L SA+K + LL I+E R +V+++G N GKS
Sbjct: 121 KLTQWMKERAYEAGIRPVD-VLLTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIKNTAGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ +++ KE++P+ Y++ GQ + +GGL R D + + + S +V++H K+
Sbjct: 237 KDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSNDVNIHRTKL 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
E ADE ++ HVG LQPP R E+ + + + + V DI AGLGW +
Sbjct: 295 EKADEFYQKHVGGLLQPP----RPDEVEAFPE----LVRFEFSVKEKTDIVFAGLGWIT- 345
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ + W G+++ R+ L+
Sbjct: 346 -VTAPVVIAGWAPKGVDVLKRKALI 369
>gi|336395193|ref|ZP_08576592.1| GTPase YqeH [Lactobacillus farciminis KCTC 3681]
Length = 370
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 185/372 (49%), Gaps = 47/372 (12%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC LRNY NE+ + + D DF +++ S ++ +VV VVD D++G
Sbjct: 44 LCKRCFRLRNY----NEITDVDVSDDDFLKLL------DSISSKDALVVNVVDIFDYEG- 92
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
S+ L+ D K+ ++VG KVDLLP+ V+ RL W++ ++K G
Sbjct: 93 -------SVIPGLQRFVGDKKI-------LMVGNKVDLLPASVNQNRLLNWLQQKSKENG 138
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
++ + +VSA K + + L+ I++ + +V+V+G N GKSTLIN
Sbjct: 139 IKSVDQI-MVSAVKGINIDKLMEMIEKYRDGK-DVYVVGTTNTGKSTLINRIISSNSDIK 196
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+T + PGTTL RI L L DTPG++H + ++ LN + K V +K L+P
Sbjct: 197 DLITTSRFPGTTLD--RIDIPLDDGHSLIDTPGIIHRYQLAHFLNAKDLKTVTPKKPLRP 254
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
T++++ GQ + V GL RLD E VT + + + LH K NADE ++ H+G
Sbjct: 255 ATFQLRDGQTIFVAGLARLDFLN---ERTNVTFYVNQGLPLHRTKTVNADEFYEKHLGDI 311
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL--GLKGEASLTLWTY 604
L PP E +K + S DI GLGW ++ G K +A +
Sbjct: 312 LTPPTD---IKEFPKFKSQIFSAHEKS------DIVIYGLGWVTIPAGTKVKA----YVP 358
Query: 605 DGIEITLREPLV 616
DG+ +++R ++
Sbjct: 359 DGVHVSIRNAII 370
>gi|301066734|ref|YP_003788757.1| GTPase [Lactobacillus casei str. Zhang]
gi|417980881|ref|ZP_12621558.1| GTP-binding protein YqeH [Lactobacillus casei 12A]
gi|417983709|ref|ZP_12624345.1| GTP-binding protein YqeH [Lactobacillus casei 21/1]
gi|300439141|gb|ADK18907.1| Predicted GTPase [Lactobacillus casei str. Zhang]
gi|410523817|gb|EKP98736.1| GTP-binding protein YqeH [Lactobacillus casei 12A]
gi|410527978|gb|EKQ02840.1| GTP-binding protein YqeH [Lactobacillus casei 21/1]
Length = 374
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 188/385 (48%), Gaps = 44/385 (11%)
Query: 234 KAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGV 293
KA ++ + + C RC LR+Y NE+A + D DF RL+ G +NA +
Sbjct: 32 KATLSKADPDDEIYCQRCFRLRHY----NEIAPVTLTDDDF-----LRLLNAIGESNA-L 81
Query: 294 VVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTR 353
+V V+D DF+G S+ L D + +LVG K D+LP ++P R
Sbjct: 82 IVNVIDIFDFNG--------SVIPGLHRFVGDNPV-------ILVGNKADVLPKSLNPNR 126
Query: 354 LDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
L W++ +AKA G + L SA+K GV LL I++ R +V+V+G N GKST
Sbjct: 127 LKNWLQQQAKAQGLRPV-ATMLASAKKGFGVDELLDAIEQYRDHR-DVYVVGVTNTGKST 184
Query: 414 LINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
LIN K+ +T + PGTTL RI L L DTPG++H H M+ +
Sbjct: 185 LINRIIKELTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRHQMAHFVGPK 242
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIE 533
+ K+V ++P TY++ GQ + +GGL R D + + ++ ++LH K+E
Sbjct: 243 DLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRNSF--VIYTDNQLTLHRTKLE 300
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGL 593
NAD+ ++ HVG L PP +A E+ D V D+ AGLGW ++
Sbjct: 301 NADDFYQKHVGGLLSPP----QADEV---PDFPPLVRFEFTPKEKADLVFAGLGWITV-- 351
Query: 594 KGEASLTLWTY--DGIEITLREPLV 616
A +T+ Y G+++ LR +
Sbjct: 352 --PAGVTVAGYAPKGVDVLLRRAFI 374
>gi|209870498|pdb|3EC1|A Chain A, Structure Of Yqeh Gtpase From Geobacillus
Stearothermophilus (An Atnos1 ATNOA1 ORTHOLOG)
gi|209870499|pdb|3EC1|B Chain B, Structure Of Yqeh Gtpase From Geobacillus
Stearothermophilus (An Atnos1 ATNOA1 ORTHOLOG)
Length = 369
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 189/378 (50%), Gaps = 46/378 (12%)
Query: 243 GEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVD 302
E +C RC L++Y NEV + + D DF ++ G + A +VV +VD D
Sbjct: 34 AEEVICQRCFRLKHY----NEVQDVPLDDDDF-----LSMLHRIGESKA-LVVNIVDIFD 83
Query: 303 FDGMF----PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWV 358
F+G F P+ AA + ++LVG K DLLP V +L RW+
Sbjct: 84 FNGSFIPGLPRFAADN-------------------PILLVGNKADLLPRSVKYPKLLRWM 124
Query: 359 RHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF 418
R A+ G ++ V LVSA K +G+ ++ I G+V+V+G N GKST IN
Sbjct: 125 RRMAEELGLCPVD-VCLVSAAKGIGMAKVMEAINRYR-EGGDVYVVGCTNVGKSTFINRI 182
Query: 419 AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMV 478
++ K + +T + PGTTL ++ I L + A LYDTPG+++ H M+ ++ + K++
Sbjct: 183 IEEATGKGNVITTSYFPGTTLDMIEIP--LESGATLYDTPGIINHHQMAHFVDARDLKII 240
Query: 479 EIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEI 538
++E+ PR Y++ GQ + GGL RLD + + + + +++H K+E AD +
Sbjct: 241 TPKREIHPRVYQLNEGQTLFFGGLARLDYIKGGRRSF--VCYMANELTVHRTKLEKADSL 298
Query: 539 WKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEAS 598
+ N +G L PP + A+E R L V DI +GLGW + G A
Sbjct: 299 YANQLGELLSPP-SKRYAAEFPPLVPRSLSVKERK-----TDIVFSGLGWVTCNDPG-AQ 351
Query: 599 LTLWTYDGIEITLREPLV 616
L + G+++ +R+ L+
Sbjct: 352 LVVHAPKGVDVFIRQSLI 369
>gi|385265566|ref|ZP_10043653.1| hypothetical protein MY7_2332 [Bacillus sp. 5B6]
gi|385150062|gb|EIF13999.1| hypothetical protein MY7_2332 [Bacillus sp. 5B6]
Length = 366
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 190/373 (50%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ T G+ ++ ++V VVD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDFLNILHT-----IGDTDS-LIVKVVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + ++LVG K D+LP V RL +W++ AK
Sbjct: 82 NGSWINGLNRFVGGN---------------PIILVGNKADILPKSVKRERLVQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G L+ V+L+SA + G++ ++ I+ R +V+V+G N GKST IN K+
Sbjct: 127 EYGLKPLD-VFLISASRGQGMKEVIDAIEHYREDR-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L + LYDTPG+++ H M+ +++ + K++ +KE
Sbjct: 185 GEENIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVDKRDLKVLTPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S + + + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYMPNELMIHRTKLENADALYEKHA 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP G+D E +L+ S DI +GLGW ++ + + +T +
Sbjct: 301 GELLTPP-GKDHLDEFP-----ELQPHTFSIKEGKTDIVFSGLGWVTVQ-QADKKITAYA 353
Query: 604 YDGIEITLREPLV 616
G+ + +R L+
Sbjct: 354 PKGVHVFVRRSLI 366
>gi|116872920|ref|YP_849701.1| GTP-binding protein YqeH [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741798|emb|CAK20922.1| GTPase family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 366
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 185/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G LL I+EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLAATD-VVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E AD+++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKADDLY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ G LQPP +D L V + DI +GLGW ++ +G A +
Sbjct: 298 EKQAGFVLQPPT-EDGMKTLPKLVPYSFTVKEKA------DIVFSGLGWITIP-EGGAKV 349
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 350 TAWVPEGVSATIRTSLV 366
>gi|289434771|ref|YP_003464643.1| GTPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289171015|emb|CBH27557.1| GTPase, putative [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 366
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 187/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ K + ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILNQISTKQA------LIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGNN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA + G LL I+EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLSATD-VVLVSAERGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ D K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTDTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E AD ++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKADALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ G LQPP +E G KL V T DI +GLGW ++ +G A +
Sbjct: 298 EKQAGFVLQPP------TEEGMKTLPKL-VPYTFNVKEKADIVFSGLGWVTIP-EGGAKV 349
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 350 TAWVPEGVSATIRTSLV 366
>gi|194466643|ref|ZP_03072630.1| Nitric-oxide synthase [Lactobacillus reuteri 100-23]
gi|194453679|gb|EDX42576.1| Nitric-oxide synthase [Lactobacillus reuteri 100-23]
Length = 375
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 192/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E KE GE+ C RC LR+Y NE+A + D DF RL+ +ANA
Sbjct: 33 KSALEKGKETGEL-YCQRCFRLRHY----NEIAPVSLTDDDF-----LRLLNQIRDANA- 81
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG K DLLP +
Sbjct: 82 LIVYVVDVFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKEDLLPRSLRRP 126
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L W+R +A G ++ V LVSA+K+ + +LL I++ R +V+V+G N GKS
Sbjct: 127 KLTDWIRQQANIAGLRPIDTV-LVSAKKNHQIDHLLDVIEKYRHNR-DVYVVGVTNVGKS 184
Query: 413 TLINTFAK-KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
TLIN K + GVK +T + PGTTL + I L L DTPG++H M+ L+
Sbjct: 185 TLINQIIKQRTGVK-ELITTSRFPGTTLDKIEIP--LDDGHVLVDTPGIIHQEQMAHVLS 241
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
+ K+V +KE++P+TY++ GQ + +GG+ R D E + + N+ +H K
Sbjct: 242 PKDLKIVAPQKEIKPKTYQLNDGQTLFLGGVARFDYLHG--ERAGMVAYFDNNLPIHRTK 299
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ NAD + H+G L PP ++ S + + ++ S DI GLGW ++
Sbjct: 300 LSNADNFYAKHLGDLLTPPTSDEKDS-FPPLERYEFHITEKS------DIVFEGLGWITV 352
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
K ++ W G+ +R ++
Sbjct: 353 PAK--TTVAAWVPKGVGALVRRAMI 375
>gi|450131395|ref|ZP_21869464.1| GTP-binding protein YqeH [Streptococcus mutans NLML8]
gi|449153855|gb|EMB57487.1| GTP-binding protein YqeH [Streptococcus mutans NLML8]
Length = 368
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 191/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTLG + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLGKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 ARADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|386319137|ref|YP_006015300.1| GTP-binding protein [Staphylococcus pseudintermedius ED99]
gi|323464308|gb|ADX76461.1| GTP-binding protein, putative [Staphylococcus pseudintermedius
ED99]
Length = 366
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 193/380 (50%), Gaps = 40/380 (10%)
Query: 237 EAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVM 296
+A EK +V +C RC L+NY NEV + + DF +++ KP G+VV
Sbjct: 27 KASLEKEDV-ICRRCFRLKNY----NEVQDVGMESDDFLKLLNGLSDKP------GIVVN 75
Query: 297 VVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR 356
+VD DF+G F + + K K++LV K+DLLP Q++ R+
Sbjct: 76 LVDVFDFEGSFIHAVKRIVGNK---------------KIILVANKIDLLPKQINKRRVSE 120
Query: 357 WVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN 416
W+R AK G V L+SA K +G+ LL I++ + +V+++G N GKSTLIN
Sbjct: 121 WLRRLAKEYGLYP-EDVCLISAYKGIGIDGLLQTIEKHRNGQ-DVYIVGTTNVGKSTLIN 178
Query: 417 TFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQK 476
++ + + +T + IPGTTL ++ I + +YDTPG++ H M+ ++
Sbjct: 179 KLIEQTVGEKNVVTTSRIPGTTLDMIDIP--IDDNHYMYDTPGIIQEHQMTHYVSTKALN 236
Query: 477 MVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENAD 536
+ +KE++ R Y++ Q++ +GGL R+D + + + S +++H K+E AD
Sbjct: 237 TIMPKKEIKQRVYQLNEAQSLFIGGLARVDYLKGGKRPL--VCYFSNELNIHRTKLEKAD 294
Query: 537 EIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
E+W+ +G L PP +DR + +LK + + DI +GLG+ + +
Sbjct: 295 ELWRKQIGTLLSPPSPKDR------FDFEQLKTVRLTTENEKKDIMISGLGFVT--VDAG 346
Query: 597 ASLTLWTYDGIEITLREPLV 616
A L + +E+TLR ++
Sbjct: 347 AELQVIVPQNVEVTLRPSIM 366
>gi|418070903|ref|ZP_12708178.1| GTPase YqeH [Lactobacillus rhamnosus R0011]
gi|423078757|ref|ZP_17067434.1| ribosome biogenesis GTPase YqeH [Lactobacillus rhamnosus ATCC
21052]
gi|357540323|gb|EHJ24340.1| GTPase YqeH [Lactobacillus rhamnosus R0011]
gi|357549045|gb|EHJ30893.1| ribosome biogenesis GTPase YqeH [Lactobacillus rhamnosus ATCC
21052]
Length = 374
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 188/382 (49%), Gaps = 40/382 (10%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A A+ E + C RC LR+Y NE+A + D DF RL+ G +NA ++
Sbjct: 33 ATLAKAEADDDIYCQRCFRLRHY----NEIAPVTLTDDDF-----LRLLNAIGESNA-LI 82
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
V V+D DF+G S+ L D + +LVG K D+LP ++P +L
Sbjct: 83 VNVIDIFDFNG--------SVIPGLHRFVGDNPV-------ILVGNKADVLPKSLNPNKL 127
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
W++ +AKA G + + L SA+K GV LL I++ R +V+V+G N GKSTL
Sbjct: 128 KNWLQQQAKAQGLRPVTTL-LASAKKGFGVDELLTAIEKYREHR-DVYVVGVTNTGKSTL 185
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN K+ +T + PGTTL RI L L DTPG++H H M+ + +
Sbjct: 186 INRIIKQLTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRHQMAHFVGPKD 243
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
K+V ++P TY++ GQ + +GGL R D + ++ ++A + LH K+ N
Sbjct: 244 LKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRQSF--VIYADTQLPLHRTKLIN 301
Query: 535 ADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
ADE ++ HVG L PP +A E+ +D V D+ AGLGW + +
Sbjct: 302 ADEFYQKHVGGLLAPP----QADEV---RDFPPLVRFEFTPKEKSDLVFAGLGWIT--VP 352
Query: 595 GEASLTLWTYDGIEITLREPLV 616
++ + G+++ LR+ +
Sbjct: 353 SGVTIAGYAPKGVDVLLRKAFI 374
>gi|424780547|ref|ZP_18207420.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Catellicoccus marimammalium M35/04/3]
gi|422842949|gb|EKU27396.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Catellicoccus marimammalium M35/04/3]
Length = 371
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 196/387 (50%), Gaps = 46/387 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K + + +E G+ C RC LR+Y NE+ + + D DF R++ K +
Sbjct: 28 KSSLQKSEESGKALYCQRCFRLRHY----NEIQDVSLTDDDFLRLLNEIRTKDA------ 77
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+++ VVD DF+G S+ K L D +L +LVG K DLLP +
Sbjct: 78 LIINVVDIFDFNG--------SIIKGLHRFIGDNEL-------LLVGNKRDLLPKSLKKG 122
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
RL +W++ RA G + V L SA+K V LL+ I+E R +V+++G N GKS
Sbjct: 123 RLIQWMKERAHEIGL-RPEEVLLTSAKKKEDVLELLSTIEEYRQGR-DVYIVGVTNVGKS 180
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN + + S +T + PGTTL ++ I L + DTPG++H M+ L+
Sbjct: 181 TLINAIIQAAVGEESVITTSQFPGTTLDLIEIP--LDDGHYIIDTPGIIHREQMAHYLSP 238
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDL---DQASVETIYVTVWASPNVSLHL 529
++ K + +KEL+P+TY++ GQ + +GGL R D D+ S V+ + ++ +H
Sbjct: 239 NDLKAITPKKELKPKTYQLNAGQTLFLGGLARFDYLEGDKGS-----FVVYTARDLMIHR 293
Query: 530 GKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWF 589
K+E AD ++ HVG LQPP ++L + +L V +DI +GLGW
Sbjct: 294 TKLEKADAFYQKHVGELLQPP------TDLEHYPLPEL-VRFEFTAKEKMDIVFSGLGWI 346
Query: 590 SLGLKGEASLTLWTYDGIEITLREPLV 616
++ KG + + W G+ + R+ L+
Sbjct: 347 TVP-KG-SKIAGWAPKGVAVIRRKALI 371
>gi|288555654|ref|YP_003427589.1| GTPase YqeH [Bacillus pseudofirmus OF4]
gi|288546814|gb|ADC50697.1| GTP-binding protein YqeH putative GTPase [Bacillus pseudofirmus
OF4]
Length = 370
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 195/374 (52%), Gaps = 39/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
EV +C RC L++Y NEV + + D DF +L+ G+ ++ ++V VVD DF
Sbjct: 34 EVIICQRCFRLKHY----NEVQDVSLTDDDF-----LKLLNTLGHTDS-LIVKVVDIFDF 83
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + +D ++LVG KVDLLP + RL W++ AK
Sbjct: 84 NGSWLPGLHRFV------GNND---------VLLVGNKVDLLPKSLKRNRLINWMKKSAK 128
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V L+SA K GV ++ + I L R +V+V+G N GKST IN K+ G
Sbjct: 129 ENGLKPVD-VLLMSAEKGEGVLDIASEIDRLRDGR-DVYVVGCTNVGKSTFINRIIKEFG 186
Query: 424 VKVSKL-TEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+L T + PGTTL ++ I L + LYDTPG+++ H M+ +++ E K + +K
Sbjct: 187 GDTEQLITTSHFPGTTLDMIDIP--LDDGSALYDTPGIINHHQMAHFVDKKELKQITPKK 244
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ GQ ++ GG+ R D + E T + S ++++H K E A+E+++NH
Sbjct: 245 EIKPMVFQLNEGQTLYFGGMARFDF--VAGERSSFTCFTSNDLNIHRTKREKAEELYQNH 302
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
+G L PP G++ + + + T DI +GLGW ++ + + +
Sbjct: 303 LGELLTPP-GKESMVDFPPLVKHEFTIKDTKS-----DIVISGLGWITVNDRN-VKVEAY 355
Query: 603 TYDGIEITLREPLV 616
G+ +++R+ ++
Sbjct: 356 APKGVGVSIRDSII 369
>gi|222100701|ref|YP_002535269.1| GTP-binding protein, HSR1-related [Thermotoga neapolitana DSM 4359]
gi|221573091|gb|ACM23903.1| GTP-binding protein, HSR1-related [Thermotoga neapolitana DSM 4359]
Length = 363
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 196/384 (51%), Gaps = 47/384 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
++A E + E+G+ +C RC +++YG++ E + D+DF + + L
Sbjct: 23 REAFEKRLEEGKEILCQRCFRIKHYGKL-----EPIEYDWDFRNQLKSYL------GGFE 71
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
VV+ V+D DF+G + + A L E KD +V V K+DLLP V+
Sbjct: 72 VVLWVIDIFDFEGTYREDIANLL-----EGKD----------VVYVINKLDLLPRAVTVK 116
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+ WV+ R KA ++ +VSA K+ G+++L +K LA VIG N GKS
Sbjct: 117 EVKEWVKKRIKAKDPERIR---IVSAEKNYGLKSL---VKLLARLTDKALVIGVTNVGKS 170
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
+L+N E T + PGTTLGILR + LYDTPG++ + L+
Sbjct: 171 SLLNRICTHEN------TISSFPGTTLGILR-RKVKGENLYLYDTPGIMTKDRILDLLDP 223
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ QK + ++EL +T++ + + + +GGL R D+D + + +++S V+ H +
Sbjct: 224 ECQKTILPKEELSRKTFKPERNRTIFMGGLCRFDVDYETERSPIFLLFSSREVTFHETRR 283
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
E ADE+ KN +G L+PP + R + TWK K ++ G ++A AGLGW S+
Sbjct: 284 ERADELMKNRLGDLLKPPCSKARYEDF-TWKKEKFVLN------EGEELAVAGLGWMSVR 336
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+G ++ + + +++ +RE LV
Sbjct: 337 -RGPLTVEVTVPENVKLVVREALV 359
>gi|418011123|ref|ZP_12650889.1| GTP-binding protein YqeH [Lactobacillus casei Lc-10]
gi|410552760|gb|EKQ26774.1| GTP-binding protein YqeH [Lactobacillus casei Lc-10]
Length = 374
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 188/385 (48%), Gaps = 44/385 (11%)
Query: 234 KAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGV 293
KA ++ + + C RC LR+Y NE+A + D DF RL+ G +NA +
Sbjct: 32 KATLSKADPDDEIYCQRCFRLRHY----NEIAPVTLTDDDF-----LRLLNAIGESNA-L 81
Query: 294 VVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTR 353
+V V+D DF+G S+ L D + +LVG K D+LP ++P R
Sbjct: 82 IVNVIDIFDFNG--------SVIPGLHRFVGDNPV-------ILVGNKADVLPKSLNPNR 126
Query: 354 LDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
L W++ +AKA G + L SA+K GV LL I++ R +V+V+G N GKST
Sbjct: 127 LKNWLQQQAKAQGLRPV-ATMLASAKKGFGVDELLDAIEKYRDHR-DVYVVGVTNTGKST 184
Query: 414 LINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
LIN K+ +T + PGTTL RI L L DTPG++H H M+ +
Sbjct: 185 LINRIIKELTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRHQMAHFVGPK 242
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIE 533
+ K+V ++P TY++ GQ + +GGL R D + + ++ ++LH K+E
Sbjct: 243 DLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRNSF--VIYTDNQLTLHRTKLE 300
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGL 593
NAD+ ++ HVG L PP +A E+ D V D+ AGLGW ++
Sbjct: 301 NADDFYQKHVGGLLSPP----QADEV---PDFPPLVRFEFTPKEKADLVFAGLGWITV-- 351
Query: 594 KGEASLTLWTY--DGIEITLREPLV 616
A +T+ Y G+++ LR +
Sbjct: 352 --PAGVTVAGYAPKGVDVLLRRAFI 374
>gi|254852115|ref|ZP_05241463.1| GTP-binding protein YqeH [Listeria monocytogenes FSL R2-503]
gi|300764844|ref|ZP_07074834.1| GTPase [Listeria monocytogenes FSL N1-017]
gi|404281049|ref|YP_006681947.1| GTPase [Listeria monocytogenes SLCC2755]
gi|404286913|ref|YP_006693499.1| GTPase [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|258605417|gb|EEW18025.1| GTP-binding protein YqeH [Listeria monocytogenes FSL R2-503]
gi|300514520|gb|EFK41577.1| GTPase [Listeria monocytogenes FSL N1-017]
gi|404227684|emb|CBY49089.1| putative GTPase [Listeria monocytogenes SLCC2755]
gi|404245842|emb|CBY04067.1| GTPase, putative [Listeria monocytogenes serotype 7 str. SLCC2482]
Length = 366
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 188/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP ++ +L RW+R
Sbjct: 83 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLNRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G LL I+EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLAATD-VVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E AD ++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKADALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ GI LQPP +E G KL V + DI +GLGW ++ +G A +
Sbjct: 298 EKQAGIVLQPP------TEEGMETLPKL-VPYSFTIKEKADIVFSGLGWVTIP-EGGAKV 349
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 350 TAWVPEGVSATIRTSLV 366
>gi|399046901|ref|ZP_10739089.1| ribosome biogenesis GTPase YqeH [Brevibacillus sp. CF112]
gi|433545543|ref|ZP_20501896.1| GTPase YqeH [Brevibacillus agri BAB-2500]
gi|398055051|gb|EJL47143.1| ribosome biogenesis GTPase YqeH [Brevibacillus sp. CF112]
gi|432183198|gb|ELK40746.1| GTPase YqeH [Brevibacillus agri BAB-2500]
Length = 373
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 185/379 (48%), Gaps = 46/379 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
+V +C RC+ +++Y NEVA + D DF +++ + +VVMVVD DF
Sbjct: 35 KVVICQRCYRIKHY----NEVAPVAMGDDDFLKILD------GIGSTQSLVVMVVDIFDF 84
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLPSQVSPTRLDRW 357
G + + LP+ V LVG KVDLLP ++ R+ W
Sbjct: 85 QGSW---------------------LRGLPRFVGNNPILLVGNKVDLLPRNINLNRVRNW 123
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
++H AK G + + L+SA+K + LL I EL R +V+++G N GKST+IN
Sbjct: 124 MQHEAKERGL-RPEDIVLISAQKGQHIDELLNRIGELRKGR-DVYIVGVTNVGKSTMINR 181
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
G +T +P PGTTL + I L ++DTPG+++ + ++ + +
Sbjct: 182 ILHDYGAAELTITTSPFPGTTLDKIEIP--LEDGRSIFDTPGIINRDQIGHMISPSDLRK 239
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
+ + + + Y+++ GQ + +GGL R+D + + V+ ++ +H K+E ADE
Sbjct: 240 ITPKSRINSKVYQLEDGQTLFLGGLARIDFVRGPKQPF--VVYVDNDLYIHRTKLEKADE 297
Query: 538 IWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEA 597
+ + H G L PP G++ A L + KV + DI +GLGW ++ K EA
Sbjct: 298 VLQKHHGTLLVPPTGEEAAKALPPFVKHSFKVKQSQIPT---DIVISGLGWVTIQGKYEA 354
Query: 598 SLTLWTYDGIEITLREPLV 616
++ + G+ + +R L+
Sbjct: 355 NVVVHAPKGVSVGMRRGLI 373
>gi|154686827|ref|YP_001421988.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens FZB42]
gi|154352678|gb|ABS74757.1| YqeH [Bacillus amyloliquefaciens FZB42]
Length = 366
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 188/373 (50%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ T G+ ++ ++V VVD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDFLNILHT-----IGDTDS-LIVKVVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + ++LVG K D+LP V RL +W++ AK
Sbjct: 82 NGSWINGLNRFVGGN---------------PIILVGNKADILPKSVKRERLVQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G L+ V+L+SA + G++ ++ I+ R +V+V+G N GKST IN K+
Sbjct: 127 EYGLKPLD-VFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L + LYDTPG+++ H M+ +++ + K++ +KE
Sbjct: 185 GEENIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVDKRDLKVLTPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S + + + +H K+ENAD++++ H
Sbjct: 243 LKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYMPNELMIHRTKLENADDLYEKHA 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP G+D E + DI +GLGW ++ + + +T +
Sbjct: 301 GELLTPP-GKDHLDEFPELTPHTFTIKE-----GKTDIVFSGLGWVTVQ-QADKKITAYA 353
Query: 604 YDGIEITLREPLV 616
G+ + +R L+
Sbjct: 354 PKGVHVFVRRSLI 366
>gi|270290433|ref|ZP_06196658.1| ribosome biogenesis GTPase YqeH [Pediococcus acidilactici 7_4]
gi|270281214|gb|EFA27047.1| ribosome biogenesis GTPase YqeH [Pediococcus acidilactici 7_4]
Length = 369
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 186/377 (49%), Gaps = 44/377 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E G++ C RC LR+Y NE+A I D DF ++++ + + +VV VVD
Sbjct: 36 ESGQL-YCQRCFRLRHY----NEIAPVSISDDDFRKLLS------QISDSDSLVVYVVDM 84
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G SL L D + +LVG K D+ P + R+ W+R
Sbjct: 85 FDFNG--------SLIPGLHRFVGDNPV-------LLVGNKADVFPKSIKRHRMREWLRQ 129
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF-A 419
+AKA G ++ V + SA++ V L I++L G R +V+V+G N GKSTLIN+ A
Sbjct: 130 QAKANGIEPVD-VMITSAKQRPAVEQLFDKIEQLRGGR-DVYVVGVTNVGKSTLINSLIA 187
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
+ G+K +T + PGTTL RI +K+ DTPG++H M+ L ++ K +
Sbjct: 188 LRNGIK-DVITTSRFPGTTLD--RIEIPFDDHSKMIDTPGIVHNDQMAHVLTTEDLKYIS 244
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+K ++PR Y++ Q + G L R D + + T VT + N+ +H K+ NAD +
Sbjct: 245 PKKTIKPRVYQLGDEQTLFAGALARFDYENS---TGSVTAYFDNNLMIHRTKLANADHFY 301
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ H G L PP ++ A+ L K+ S D+ GLGW + + + +
Sbjct: 302 EKHAGELLTPPAAENLAN-LPELARHHFKIEEDS------DVVFEGLGW--IAVPAGSVV 352
Query: 600 TLWTYDGIEITLREPLV 616
T W GI + +R L+
Sbjct: 353 TAWAPKGISVVIRRALI 369
>gi|315282397|ref|ZP_07870817.1| ribosome biogenesis GTPase YqeH [Listeria marthii FSL S4-120]
gi|313613949|gb|EFR87673.1| ribosome biogenesis GTPase YqeH [Listeria marthii FSL S4-120]
Length = 366
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 188/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G LL I EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLAATD-VVLVSAEKGHGFDTLLEKIDELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ + K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTNTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E A+ ++
Sbjct: 240 PKKEIKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKAEALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+N G+ LQPP +E G KL V + DI +GLGW ++ +G A +
Sbjct: 298 ENQAGLVLQPP------TEEGMKTLPKL-VPYSFTVKEKADIVFSGLGWVTIP-EGGAKV 349
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 350 TAWVPEGVSATIRTSLV 366
>gi|319892654|ref|YP_004149529.1| GTP-binding protein YqeH [Staphylococcus pseudintermedius HKU10-03]
gi|317162350|gb|ADV05893.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Staphylococcus pseudintermedius HKU10-03]
Length = 366
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 188/373 (50%), Gaps = 39/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NEV + + DF +++ KP G+VV +VD DF
Sbjct: 33 EDVICRRCFRLKNY----NEVQDVGMESDDFLKLLNGLSDKP------GIVVNLVDVFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++LV K+DLLP Q++ R+ W+R AK
Sbjct: 83 EGSFIHAVKRIVGNK---------------KIILVANKIDLLPKQINKRRVSEWLRRLAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G V L+SA K +G+ LL I++ + +V+++G N GKSTLIN ++
Sbjct: 128 EYGLYP-EDVCLISAYKGIGIDGLLQTIEKHRNGQ-DVYIVGTTNVGKSTLINKLIEQTV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + IPGTTL ++ I + +YDTPG++ H M+ ++ + +KE
Sbjct: 186 GEKNVVTTSRIPGTTLDMIDIP--IDDNHYMYDTPGIIQEHQMTHYVSTKALNTIMPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ Q++ +GGL R+D + + + S +++H K+E ADE+W+ +
Sbjct: 244 IKQRVYQLNEAQSLFIGGLARVDYLKGGKRPL--VCYFSNELNIHRTKLEKADELWRKQI 301
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP +DR + +LK + + DI +GLG+ + + A L +
Sbjct: 302 GTLLSPPSPKDR------FDFEQLKTVRLTTENEKKDIMISGLGFVT--VDAGAELQVIV 353
Query: 604 YDGIEITLREPLV 616
+E+TLR ++
Sbjct: 354 PQNVEVTLRPSIM 366
>gi|16800594|ref|NP_470862.1| GTP-binding protein YqeH [Listeria innocua Clip11262]
gi|422412980|ref|ZP_16489939.1| ribosome biogenesis GTPase YqeH [Listeria innocua FSL S4-378]
gi|423100573|ref|ZP_17088280.1| ribosome biogenesis GTPase YqeH [Listeria innocua ATCC 33091]
gi|16413999|emb|CAC96757.1| lin1526 [Listeria innocua Clip11262]
gi|313618857|gb|EFR90732.1| ribosome biogenesis GTPase YqeH [Listeria innocua FSL S4-378]
gi|370792797|gb|EHN60640.1| ribosome biogenesis GTPase YqeH [Listeria innocua ATCC 33091]
Length = 366
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 187/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G LL I+EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLAATD-VVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E AD ++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKADALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ G LQPP +E G KL V T + DI +GLGW ++ +G A +
Sbjct: 298 EKQAGFVLQPP------TEEGMKTLPKL-VPYTFTVKDKADIVFSGLGWVTIP-EGGAKV 349
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 350 TAWVPEGVSATIRTSLV 366
>gi|212638655|ref|YP_002315175.1| GTP-binding protein YqeH [Anoxybacillus flavithermus WK1]
gi|212560135|gb|ACJ33190.1| Predicted GTPase [Anoxybacillus flavithermus WK1]
Length = 372
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 188/370 (50%), Gaps = 38/370 (10%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC L++Y NEV + + D DF ++ G A+ G+VV +VD DF+G
Sbjct: 41 ICQRCFRLKHY----NEVQDVSLTDDDF-----LNILHGIGQAD-GLVVKIVDIFDFNGS 90
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
+ + + KK ++LVG KVDLLP V ++ RW++ A+ G
Sbjct: 91 WLPGLHRFVGKK---------------DVLLVGNKVDLLPKSVKHEKITRWMKQTARELG 135
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
+ V+LVSA K G++ ++ I E + +V+V+G N GKST IN K+ K
Sbjct: 136 L-QPRDVFLVSAHKGYGMKEVMTAIDEYRNEK-DVYVVGCTNVGKSTFINRIIKEATGKG 193
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+ +T + PGTTL ++ I L + LYDTPG+++ H M+ +++ + K++ +KE++P
Sbjct: 194 NVITTSYFPGTTLDMIEIP--LDDGSALYDTPGIINHHQMAHFVDKKDLKVITPKKEIKP 251
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
+ Y++ Q + GGL RLD + + S + +H K E+ADE+++ H+G
Sbjct: 252 KVYQLNEQQTLFFGGLARLDYVSGGRRSF--VCYMSNELFIHRTKREHADELYERHLGEL 309
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
LQPP + +L + DI +GLGW + G A + + +G
Sbjct: 310 LQPP-RKSYCEQLPPLVAHHFTLKEPK-----TDIVFSGLGWVTCHEPG-AQVIAYVPEG 362
Query: 607 IEITLREPLV 616
+ + LR+ L+
Sbjct: 363 VGVVLRKSLI 372
>gi|222152534|ref|YP_002561709.1| GTP-binding protein YqeH [Streptococcus uberis 0140J]
gi|222113345|emb|CAR40947.1| GTP-binding protein [Streptococcus uberis 0140J]
Length = 372
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 198/387 (51%), Gaps = 43/387 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GE+ C RC LR+Y NE+ + I D +F +L+ G+++A
Sbjct: 26 KAALEKGLESGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV VVD DF+G ++ + A +D ++LVG K D+LP V +
Sbjct: 75 LVVNVVDIFDFNGSIIPGLSRFV------AGND---------VLLVGNKKDILPKSVKDS 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G ++ V+L SA+ ++ L++ I +L R +V+V+G N GKS
Sbjct: 120 KVTQWLIERAYEEGLRPVD-VFLTSAQNKYAIKELISRIDQLRKGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LDDGSFIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K V +KE++P+TY++ Q + +GGL R D S E T + N+ +H K+
Sbjct: 236 KDLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--VSGEKQGFTAYFDNNLKIHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNG-IDIAAAGLGWFSL 591
E A + ++ H+G L PP D+ S K+S + +N +D+ +GLGW +
Sbjct: 294 EGASDFYQKHLGSLLLPPNHIDKES--------FPKLSSFDFTINSKMDLVFSGLGWIRI 345
Query: 592 GLKGE--ASLTLWTYDGIEITLREPLV 616
+ +T W +G+ + R+ ++
Sbjct: 346 NGSEDKPVKITAWAPEGVAVLTRKAII 372
>gi|422809570|ref|ZP_16857981.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Listeria monocytogenes FSL J1-208]
gi|378753184|gb|EHY63769.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Listeria monocytogenes FSL J1-208]
Length = 366
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 187/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G LL I+EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLAATD-VVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E AD ++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKADALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ GI LQPP +E G KL V + DI +GLGW ++ +G A +
Sbjct: 298 EKQAGIVLQPP------TEEGMETLPKL-VPYSFTIKEKADIVFSGLGWVTIP-EGGAKV 349
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 350 TAWVPEGVSATIRTSLV 366
>gi|450121839|ref|ZP_21866478.1| GTP-binding protein YqeH [Streptococcus mutans ST6]
gi|449228725|gb|EMC28079.1| GTP-binding protein YqeH [Streptococcus mutans ST6]
Length = 368
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 192/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV V+D DFDG + P ++ + D L+LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFDGSVIPG------LQRFISSND----------LLLVGNKADILPKSVKS 118
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GK
Sbjct: 119 GKITQWLMERAHEEGLWPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGK 176
Query: 412 STLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
STLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 177 STLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLS 234
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K
Sbjct: 235 DKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTK 292
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 293 LAGADTFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--I 343
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ G A + +W +G+ + R+ L+
Sbjct: 344 RINGRAKIAVWAPEGVAVVTRKSLI 368
>gi|315303239|ref|ZP_07873887.1| ribosome biogenesis GTPase YqeH [Listeria ivanovii FSL F6-596]
gi|313628396|gb|EFR96881.1| ribosome biogenesis GTPase YqeH [Listeria ivanovii FSL F6-596]
Length = 366
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 188/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+ Y NE+ + + D DF R++ K + ++V VVD DF
Sbjct: 33 EQVICKRCFRLKYY----NEIQDVALTDDDFLRILNQISTKQA------LIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGNN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G +LL I+EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLVATD-VVLVSAEKGHGFDSLLEKIEELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+AS N+ +H K+E AD ++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYASNNLPIHRTKLEKADALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ G+ LQPP +E G KL V T DI +GLGW ++ +G A +
Sbjct: 298 EKQAGLVLQPP------TEEGMKTLPKL-VPYTFNVKEKADIVFSGLGWVTIP-EGGAKI 349
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 350 TAWVPEGVSATIRTSLV 366
>gi|323353254|ref|ZP_08087787.1| GTP-binding protein [Streptococcus sanguinis VMC66]
gi|322121200|gb|EFX92963.1| GTP-binding protein [Streptococcus sanguinis VMC66]
Length = 368
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 192/388 (49%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDSKVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K + +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYISPKKEIKPKTYQLNPNQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+E A + + HVG L PP+G+++ E T + + + DI +GLGW
Sbjct: 290 RTKLEGASDFYDKHVGGLLVPPVGKEK-EEFPTLVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
L + G A + W +G+ + R+ ++
Sbjct: 343 --LRVSGPARVAGWAPEGVAVVTRKAII 368
>gi|196248991|ref|ZP_03147691.1| Nitric-oxide synthase [Geobacillus sp. G11MC16]
gi|196211867|gb|EDY06626.1| Nitric-oxide synthase [Geobacillus sp. G11MC16]
Length = 369
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 195/395 (49%), Gaps = 50/395 (12%)
Query: 230 ERKKKAREAQK----EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKP 285
E KKA A K ++ E +C RC L++Y NEV + + D DF ++
Sbjct: 17 EDPKKAGYAPKSVLEKETEEIICQRCFRLKHY----NEVQDVPLDDNDF-----LHMLHR 67
Query: 286 SGNANAGVVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTK 341
G + A +VV +VD DF+G P+ A + ++LVG K
Sbjct: 68 IGESKA-LVVYIVDIFDFNGSWIPGLPRFAVNN-------------------PILLVGNK 107
Query: 342 VDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNV 401
DLLP V +L +W+R A+ G ++ V LVSA K +G+ ++ I R +V
Sbjct: 108 ADLLPRSVKYPKLLQWMRRMAEELGLCPID-VRLVSAAKGIGMTGVMETIDRYREGR-DV 165
Query: 402 WVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLL 461
+V+G N GKST IN K+ K + +T + PGTTL ++ I L A LYDTPG++
Sbjct: 166 YVVGCTNVGKSTFINRIIKEATGKGNVITTSYFPGTTLDMIEIP--LEGGASLYDTPGII 223
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWA 521
+ H M+ ++ + K++ ++E+ PR Y++ GQ + GGL RLD + + +
Sbjct: 224 NHHQMAHFVDARDLKIITPKREIHPRVYQLNEGQTLFFGGLARLDYVKGGRRSF--VCYV 281
Query: 522 SPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDI 581
+ ++++H K+E AD ++ N +G L PP + A E R L V +DI
Sbjct: 282 ANDLTIHRTKLEKADSLYANQLGSLLAPP-SKRYADEFPPLVSRPLSVKERK-----MDI 335
Query: 582 AAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+GLGW + G A L + G+++ +R+ L+
Sbjct: 336 VFSGLGWVTCNDPG-AQLVVHAPKGVDVFIRQSLI 369
>gi|450089114|ref|ZP_21855043.1| GTP-binding protein YqeH [Streptococcus mutans NV1996]
gi|449215966|gb|EMC16128.1| GTP-binding protein YqeH [Streptococcus mutans NV1996]
Length = 368
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 190/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ GN+ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGNSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 ARADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|387760687|ref|YP_006067664.1| ribosome biogenesis GTPase YqeH [Streptococcus salivarius 57.I]
gi|339291454|gb|AEJ52801.1| ribosome biogenesis GTPase YqeH [Streptococcus salivarius 57.I]
Length = 372
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 197/401 (49%), Gaps = 47/401 (11%)
Query: 219 ERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVI 278
E +K + A KKA E GE+ C RC LR+Y NE+ + I D +F
Sbjct: 16 EDKEKAGFTPASSIKKAEET----GEL-YCQRCFRLRHY----NEIVDVHITDDEF---- 62
Query: 279 ATRLMKPSGNANAGVVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVL 337
+L+ G+++A +VV VVD DF+G + P + D ++L
Sbjct: 63 -LKLLHEVGDSDA-LVVNVVDIFDFNGSIIPG------LSRFVSGND----------VLL 104
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
VG K D+LP V ++ +W+ RA G ++ V L SA+ ++ L+ I++L
Sbjct: 105 VGNKKDILPKSVKDGKVTQWLTERAHEEGMRPVD-VMLTSAQNHHAIKELIQRIEKLRKG 163
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
R +V+V+G N GKSTLIN K+ +T + PGTTL + I L + ++DT
Sbjct: 164 R-DVYVVGVTNVGKSTLINAIIKEITGDKDVITTSRFPGTTLDKIEIP--LDDGSYIFDT 220
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PG++H H M+ L+ + K V +KE++P+TY++ GQ + +GGL R D + +
Sbjct: 221 PGIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQTLFLGGLGRFDFIDGNKQGF-- 278
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
T + N+ LH K+E AD + HVG L PP +D A + + V +
Sbjct: 279 TAFFDNNLKLHRTKLEGADAFYDKHVGSLLMPPGPKDLA-DFPKLVRHEFTVKDKT---- 333
Query: 578 GIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
DI +GLGW + K E + W +G+ + +R+ ++
Sbjct: 334 --DIVFSGLGWIRVQGKAEQPTIVAAWAPEGVGVVVRKAII 372
>gi|46907719|ref|YP_014108.1| GTP-binding protein YqeH [Listeria monocytogenes serotype 4b str.
F2365]
gi|217964363|ref|YP_002350041.1| GTP-binding protein YqeH [Listeria monocytogenes HCC23]
gi|226224092|ref|YP_002758199.1| hypothetical protein Lm4b_01501b [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|254931426|ref|ZP_05264785.1| GTP-binding protein YqeH [Listeria monocytogenes HPB2262]
gi|290893851|ref|ZP_06556829.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J2-071]
gi|386008262|ref|YP_005926540.1| GTPase, putative [Listeria monocytogenes L99]
gi|386026863|ref|YP_005947639.1| putative ribosome biogenesis GTP-binding protein [Listeria
monocytogenes M7]
gi|386732230|ref|YP_006205726.1| GTPase YqeH [Listeria monocytogenes 07PF0776]
gi|404407929|ref|YP_006690644.1| GTPase [Listeria monocytogenes SLCC2376]
gi|405749835|ref|YP_006673301.1| GTPase [Listeria monocytogenes ATCC 19117]
gi|405752711|ref|YP_006676176.1| GTPase [Listeria monocytogenes SLCC2378]
gi|405755649|ref|YP_006679113.1| GTPase [Listeria monocytogenes SLCC2540]
gi|406704264|ref|YP_006754618.1| GTPase, putative [Listeria monocytogenes L312]
gi|417316034|ref|ZP_12102692.1| GTPase YqeH [Listeria monocytogenes J1816]
gi|417317609|ref|ZP_12104221.1| GTPase YqeH [Listeria monocytogenes J1-220]
gi|424823253|ref|ZP_18248266.1| GTP-binding protein [Listeria monocytogenes str. Scott A]
gi|46880988|gb|AAT04285.1| putative GTPase [Listeria monocytogenes serotype 4b str. F2365]
gi|217333633|gb|ACK39427.1| GTPase family protein [Listeria monocytogenes HCC23]
gi|225876554|emb|CAS05263.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|290556568|gb|EFD90104.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J2-071]
gi|293582976|gb|EFF95008.1| GTP-binding protein YqeH [Listeria monocytogenes HPB2262]
gi|307571072|emb|CAR84251.1| GTPase, putative [Listeria monocytogenes L99]
gi|328465531|gb|EGF36760.1| GTPase YqeH [Listeria monocytogenes J1816]
gi|328474857|gb|EGF45657.1| GTPase YqeH [Listeria monocytogenes J1-220]
gi|332311933|gb|EGJ25028.1| GTP-binding protein [Listeria monocytogenes str. Scott A]
gi|336023444|gb|AEH92581.1| putative ribosome biogenesis GTP-binding protein [Listeria
monocytogenes M7]
gi|384390988|gb|AFH80058.1| GTPase YqeH [Listeria monocytogenes 07PF0776]
gi|404219035|emb|CBY70399.1| GTPase, putative [Listeria monocytogenes ATCC 19117]
gi|404221911|emb|CBY73274.1| putative GTPase [Listeria monocytogenes SLCC2378]
gi|404224849|emb|CBY76211.1| putative GTPase [Listeria monocytogenes SLCC2540]
gi|404242078|emb|CBY63478.1| putative GTPase [Listeria monocytogenes SLCC2376]
gi|406361294|emb|CBY67567.1| GTPase, putative [Listeria monocytogenes L312]
Length = 366
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 187/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G LL I+EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLAATD-VVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E AD ++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKADALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ GI LQPP +E G KL V + DI +GLGW ++ +G A +
Sbjct: 298 EKQAGIVLQPP------TEEGMETLPKL-VPYSFTIKEKADIVFSGLGWVTIP-EGGAKV 349
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 350 TAWVPEGVSATIRTSLV 366
>gi|254827779|ref|ZP_05232466.1| GTP-binding protein YqeH [Listeria monocytogenes FSL N3-165]
gi|258600159|gb|EEW13484.1| GTP-binding protein YqeH [Listeria monocytogenes FSL N3-165]
Length = 366
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 188/378 (49%), Gaps = 49/378 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G LL I+EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLAATD-VVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E A+ ++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKAEALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSLGLKGEAS 598
+ G+ LQPP +D + K+ S+ V DI +GLGW ++ +G A
Sbjct: 298 EKQAGLVLQPPTEEDMKT--------LPKLVPYSFTVKEKADIVFSGLGWVTIP-EGGAK 348
Query: 599 LTLWTYDGIEITLREPLV 616
+T W +G+ T+R LV
Sbjct: 349 VTAWVPEGVSATIRTSLV 366
>gi|423069216|ref|ZP_17058003.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius F0395]
gi|355365104|gb|EHG12830.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius F0395]
Length = 368
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + + D DF RL+ G++NA
Sbjct: 26 QSALEKGMETGEL-YCQRCFRLRHY----NEITDVQLTDDDF-----LRLLHEVGDSNA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V ++ +W+ RA G ++ V L SA+ ++ L+ I++ R +V+V+G N
Sbjct: 116 VKSNKVTQWLTERAHEEGLRPID-VVLTSAQNKQAIKELMEKIEQYRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKEVITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K + +KE++P+TY++ Q + +GGL R D + + T + + LH
Sbjct: 232 YLSAKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGNKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
++ A E ++ HVG L PP + S+ +LK+ + D+ +GLGW
Sbjct: 290 RTRLAGAGEFYEKHVGSLLTPP-SKKEVSDFPQLVKHELKIEAKT------DVVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ + G A + W +G+ + +R+ ++
Sbjct: 343 --IRVTGPAKIAAWAPEGVAVVIRKAII 368
>gi|308174356|ref|YP_003921061.1| GTPase [Bacillus amyloliquefaciens DSM 7]
gi|307607220|emb|CBI43591.1| GTPase involved in ribosome 30S assembly [Bacillus
amyloliquefaciens DSM 7]
Length = 366
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 189/373 (50%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ T G+ ++ ++V VVD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDFLNILHT-----IGDTDS-LIVKVVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + ++LVG K D+LP V RL +W++ AK
Sbjct: 82 NGSWINGLNRFVGGN---------------PIILVGNKADILPKSVKRERLVQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G L+ V+L+SA + G++ ++ I+ R +V+V+G N GKST IN K+
Sbjct: 127 EYGLKPLD-VFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L + LYDTPG+++ H M+ +++ + K++ +KE
Sbjct: 185 GEENIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVDKRDLKVLTPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S + + + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYMPNELMIHRTKLENADALYEKHA 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP G+D E +L + DI +GLGW ++ + + +T +
Sbjct: 301 GELLTPP-GKDHLDEF-----PELTAHTFTIKEGKTDIVFSGLGWVTVQ-QADKKITAYA 353
Query: 604 YDGIEITLREPLV 616
G+ + +R L+
Sbjct: 354 PKGVHVFVRRSLI 366
>gi|163790555|ref|ZP_02184984.1| hypothetical protein CAT7_08240 [Carnobacterium sp. AT7]
gi|159874158|gb|EDP68233.1| hypothetical protein CAT7_08240 [Carnobacterium sp. AT7]
Length = 377
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/385 (33%), Positives = 192/385 (49%), Gaps = 46/385 (11%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A E +EKGE+ C RC LR+Y NE+ + + D DF +L+ G+ +A ++
Sbjct: 36 ALEKGQEKGEI-YCQRCFRLRHY----NEIQDVQLTDDDF-----LKLLNELGSEDA-LI 84
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
V V+D DF+G SL L + K P L LVG KVDLLP + ++
Sbjct: 85 VNVIDIFDFNG--------SLIPGLH------RFVGKNPVL-LVGNKVDLLPKSLKRGKM 129
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
+W+R RA G + V L SA K + LL I++ R NV+V+G N GKSTL
Sbjct: 130 TQWLRERAHEEGL-RPEDVLLTSAMKPAEMEVLLDTIEKHRKGR-NVFVVGVTNVGKSTL 187
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN K +T + PGTTL RI L L DTPG++H H M+ L +
Sbjct: 188 INQIIKSTAGVQDLITTSQFPGTTLD--RIEIPLDDGKFLIDTPGIIHRHQMAHVLGDKD 245
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
K++ +KE++P Y++ GQ + GG+ R D + + T + S ++ +H K+E
Sbjct: 246 LKLIAPKKEIKPIVYQLNEGQTLFFGGVARFDYLKGGRHSF--TCFTSNDLLIHRTKLEK 303
Query: 535 ADEIWKNHVGIRLQPPIGQDRASELGTWKDR---KLKVSGTSWDVNGIDIAAAGLGWFSL 591
ADE+++ VG LQPP R +E+ + + + V S DI AGLGW ++
Sbjct: 304 ADELYQKQVGKLLQPP----RENEIENFPELVRFEFSVKEKS------DIVFAGLGWVTV 353
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
G + W GI++ +R+ L+
Sbjct: 354 NEPG-CVVAGWAPKGIDVLIRKSLI 377
>gi|375363100|ref|YP_005131139.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|451346227|ref|YP_007444858.1| GTPase YqeH [Bacillus amyloliquefaciens IT-45]
gi|452856330|ref|YP_007498013.1| GTPase involved in ribosome 30S assembly [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|371569094|emb|CCF05944.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|449849985|gb|AGF26977.1| GTPase YqeH [Bacillus amyloliquefaciens IT-45]
gi|452080590|emb|CCP22353.1| GTPase involved in ribosome 30S assembly [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 366
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 189/373 (50%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ T G+ ++ ++V VVD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDFLNILHT-----IGDTDS-LIVKVVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + ++LVG K D+LP V RL +W++ AK
Sbjct: 82 NGSWINGLNRFVGGN---------------PIILVGNKADILPKSVKRERLVQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G L+ V+L+SA + G++ ++ I+ R +V+V+G N GKST IN K+
Sbjct: 127 EYGLKPLD-VFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L + LYDTPG+++ H M+ +++ + K++ +KE
Sbjct: 185 GEENIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVDKRDLKVLTPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S + + + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYMPNELMIHRTKLENADALYEKHA 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP G+D E +L + DI +GLGW ++ + + +T +
Sbjct: 301 GELLTPP-GKDHLDEF-----PELTAHTFTIKEGKTDIVFSGLGWVTVQ-QADKKITAYA 353
Query: 604 YDGIEITLREPLV 616
G+ + +R L+
Sbjct: 354 PKGVHVFVRRSLI 366
>gi|239632052|ref|ZP_04675083.1| nitric-oxide synthase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|239526517|gb|EEQ65518.1| nitric-oxide synthase [Lactobacillus paracasei subsp. paracasei
8700:2]
Length = 374
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 188/385 (48%), Gaps = 44/385 (11%)
Query: 234 KAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGV 293
KA ++ + + C RC LR+Y NE+A + D DF RL+ G +NA +
Sbjct: 32 KATLSKADPDDEIYCQRCFRLRHY----NEIAPVTLTDDDF-----LRLLNAIGESNA-L 81
Query: 294 VVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTR 353
+V V+D DF+G S+ L D + +LVG K D+LP ++P R
Sbjct: 82 IVNVIDIFDFNG--------SVIPGLHRFVGDNPV-------ILVGNKADVLPKSLNPNR 126
Query: 354 LDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
L W++ +AKA G + L SA+K GV LL I++ R +V+V+G N GKST
Sbjct: 127 LKNWLQQQAKAQGLRPV-ATMLASAKKGFGVDELLDAIEQYRDHR-DVYVVGVTNTGKST 184
Query: 414 LINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
LIN K+ +T + PGTTL RI L L DTPG++H H M+ +
Sbjct: 185 LINRIIKELTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRHQMAHFVGPK 242
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIE 533
+ K+V ++P TY++ GQ + +GGL + D + + ++ ++LH K+E
Sbjct: 243 DLKLVSPTSVIKPATYQLNEGQTIFLGGLAQFDYLRGGRNSF--VIYTDNQLTLHRTKLE 300
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGL 593
NAD+ ++ HVG L PP +A E+ D V D+ AGLGW ++
Sbjct: 301 NADDFYQKHVGGLLSPP----QADEV---PDFPPLVRFEFTPKEKADLVFAGLGWITV-- 351
Query: 594 KGEASLTLWTY--DGIEITLREPLV 616
A +T+ Y G+++ LR +
Sbjct: 352 --PAGVTVAGYAPKGVDVLLRRAFI 374
>gi|335031074|ref|ZP_08524532.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus SK52 = DSM
20563]
gi|333770542|gb|EGL47570.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus SK52 = DSM
20563]
Length = 368
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + + D DF RL+ G++NA
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEITDVQLTDDDF-----LRLLHEVGDSNA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ ++ L+ I++ R +V+V+G N
Sbjct: 116 VKTSKVTQWLMERAHEEGLRPVD-VVLTSAQNKQAIKELIEKIEQYRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKEVITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K + +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+ A E ++ HVG L PP + S+ +LK+ + D+ +GLGW
Sbjct: 290 RTKLAGAGEFYEKHVGSLLTPP-SKKEVSDFPQLVKHELKIEAKT------DVVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ + G A + +W +G+ + R+ ++
Sbjct: 343 --IRVTGPAQIAVWAPEGVAVVTRKAII 368
>gi|448238803|ref|YP_007402861.1| GTPase [Geobacillus sp. GHH01]
gi|445207645|gb|AGE23110.1| GTPase [Geobacillus sp. GHH01]
Length = 369
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 189/377 (50%), Gaps = 46/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NEV + + D DF ++ G + A +VV +VD DF
Sbjct: 35 EEIICQRCFRLKHY----NEVQDVPLDDSDF-----LNMLHRIGESKA-LVVNIVDIFDF 84
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
+G P+ AA++ ++LVG K DLLP V +L RW+R
Sbjct: 85 NGSWIPGLPRFAAEN-------------------PILLVGNKADLLPRSVKYPKLLRWMR 125
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
A+ G ++ V LVSA K +G+ ++ I G+V+V+G N GKST IN
Sbjct: 126 RMAEELGLCPVD-VCLVSAAKGIGMAKVMEAINRYR-EGGDVYVVGCTNVGKSTFINRII 183
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
++ K + +T + PGTTL ++ I L + A LYDTPG+++ H M+ ++ + K++
Sbjct: 184 EEATGKGNVITTSYFPGTTLDMIEIP--LESGATLYDTPGIINHHQMAHFVDARDLKIIT 241
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
++E+ PR Y++ GQ + GGL RLD + + + + +++H K+E AD ++
Sbjct: 242 PKREIHPRVYQLNEGQTLFFGGLARLDYIKGGRRSF--VCYMANELTVHRTKLEKADSLY 299
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
N +G L PP + A+E R L V DI +GLGW + G A L
Sbjct: 300 ANQLGDLLSPP-NKRYAAEFPPLVPRSLSVKERK-----TDIVFSGLGWVTCNDPG-AQL 352
Query: 600 TLWTYDGIEITLREPLV 616
+ G+++ +R+ L+
Sbjct: 353 VVHAPKGVDVFIRQSLI 369
>gi|47093412|ref|ZP_00231177.1| GTPase, putative [Listeria monocytogenes str. 4b H7858]
gi|424714366|ref|YP_007015081.1| Uncharacterized protein yqeH [Listeria monocytogenes serotype 4b
str. LL195]
gi|47018191|gb|EAL08959.1| GTPase, putative [Listeria monocytogenes str. 4b H7858]
gi|424013550|emb|CCO64090.1| Uncharacterized protein yqeH [Listeria monocytogenes serotype 4b
str. LL195]
Length = 371
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 187/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 38 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 87
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 88 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 128
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G LL I+EL + +V+V+G N GKSTLIN
Sbjct: 129 TRAKEQGLAATD-VVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLINRII 186
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 187 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 244
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E AD ++
Sbjct: 245 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKADALY 302
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ GI LQPP +E G KL V + DI +GLGW ++ +G A +
Sbjct: 303 EKQAGIVLQPP------TEEGMETLPKL-VPYSFTIKEKADIVFSGLGWVTIP-EGGAKV 354
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 355 TAWVPEGVSATIRTSLV 371
>gi|421768868|ref|ZP_16205578.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus rhamnosus LRHMDP2]
gi|421770979|ref|ZP_16207640.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus rhamnosus LRHMDP3]
gi|411185717|gb|EKS52844.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus rhamnosus LRHMDP2]
gi|411186414|gb|EKS53538.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus rhamnosus LRHMDP3]
Length = 374
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 190/384 (49%), Gaps = 44/384 (11%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A A+ E + C RC LR+Y NE+A + D DF RL+ G +NA ++
Sbjct: 33 ATLAKAEADDDIYCQRCFRLRHY----NEIAPVTLTDDDF-----LRLLNAIGESNA-LI 82
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
V V+D DF+G S+ L D + +LVG K D+LP ++P +L
Sbjct: 83 VNVIDIFDFNG--------SVIPGLHRFVGDNPV-------ILVGNKADVLPKSLNPNKL 127
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
W++ +AKA G + + L SA+K GV LL I++ R +V+V+G N GKSTL
Sbjct: 128 KNWLQQQAKAQGLRPVTTL-LASAKKGFGVDELLTAIEKYREHR-DVYVVGVTNTGKSTL 185
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN K+ +T + PGTTL RI L L DTPG++H H M+ + +
Sbjct: 186 INRIIKQLIGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRHQMAHFVGPKD 243
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
K+V ++P TY++ GQ + +GGL R D + ++ ++A + LH K+ N
Sbjct: 244 LKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRQSF--VIYADTQLPLHRTKLIN 301
Query: 535 ADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
AD+ ++ HVG L PP +A E+ +D V D+ AGLGW ++
Sbjct: 302 ADDFYQKHVGGLLAPP----QADEV---RDFPPLVRFEFTPKEKSDLVFAGLGWITV--- 351
Query: 595 GEASLTLWTY--DGIEITLREPLV 616
A +T+ Y G+++ LR+ +
Sbjct: 352 -PAGVTIAGYAPKGVDVLLRKAFI 374
>gi|25011748|ref|NP_736143.1| GTP-binding protein YqeH [Streptococcus agalactiae NEM316]
gi|77414364|ref|ZP_00790520.1| GTP-binding protein [Streptococcus agalactiae 515]
gi|24413288|emb|CAD47367.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159599|gb|EAO70754.1| GTP-binding protein [Streptococcus agalactiae 515]
Length = 372
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 193/386 (50%), Gaps = 41/386 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + I D +F +L+ G+++A
Sbjct: 26 RAALEKGLETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G ++ + A +D ++LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNGSIIPGLSRFV------AGND---------VLLVGNKKDILPKSVKDG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G N GKS
Sbjct: 120 KVTQWLTERAHEEGLRPVD-VILTSAQNHHAIKDLIDTIEKYRHGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L + ++DTPG++H H M+ L
Sbjct: 178 TLINAIIREITGSRDVITTSRFPGTTLDKIEIP--LDDGSYIFDTPGIIHRHQMAHYLTA 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K V +KE++P+TY++ Q + + GL R D + T + N++LH K+
Sbjct: 236 KNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGF--TAYFDNNLNLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
ADE + HVG L PP G++ S+ + + N +DI +GLGW +
Sbjct: 294 VGADEFYTKHVGKLLTPPTGKE-VSDFPKLVRHEFTIK------NKMDIVYSGLGWIRVK 346
Query: 593 LKGEASLTL--WTYDGIEITLREPLV 616
+ E + + W +G+ + LR+ L+
Sbjct: 347 SEAENPVVVAAWAPEGVAVVLRKALI 372
>gi|138896098|ref|YP_001126551.1| GTP-binding protein YqeH [Geobacillus thermodenitrificans NG80-2]
gi|134267611|gb|ABO67806.1| GTPase family protein [Geobacillus thermodenitrificans NG80-2]
Length = 371
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 195/395 (49%), Gaps = 50/395 (12%)
Query: 230 ERKKKAREAQK----EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKP 285
E KKA A K ++ E +C RC L++Y NEV + + D DF ++
Sbjct: 19 EDPKKAGYAPKSVLEKETEEIICQRCFRLKHY----NEVQDVPLDDNDF-----LHMLHR 69
Query: 286 SGNANAGVVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTK 341
G + A +VV +VD DF+G P+ A + ++LVG K
Sbjct: 70 IGESKA-LVVYIVDIFDFNGSWIPGLPRFAVNN-------------------PILLVGNK 109
Query: 342 VDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNV 401
DLLP V +L +W+R A+ G ++ V LVSA K +G+ ++ I R +V
Sbjct: 110 ADLLPRSVKYPKLLQWMRRMAEELGLRPID-VRLVSAAKGIGMTGVMETIDRYREGR-DV 167
Query: 402 WVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLL 461
+V+G N GKST IN K+ K + +T + PGTTL ++ I L A LYDTPG++
Sbjct: 168 YVVGCTNVGKSTFINRIIKEATGKGNVITTSYFPGTTLDMIEIP--LEGGASLYDTPGII 225
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWA 521
+ H M+ ++ + K++ ++E+ PR Y++ GQ + GGL RLD + + +
Sbjct: 226 NHHQMAHFVDARDLKIITPKREIHPRVYQLNEGQTLFFGGLARLDYVKGGRRSF--VCYV 283
Query: 522 SPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDI 581
+ ++++H K+E AD ++ N +G L PP + A E R L V +DI
Sbjct: 284 ANDLTIHRTKLEKADSLYANQLGSLLAPP-SKRYADEFPPLVSRPLSVKERK-----MDI 337
Query: 582 AAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+GLGW + G A L + G+++ +R+ L+
Sbjct: 338 VFSGLGWVTCNDPG-AQLVVHAPKGVDVFIRQSLI 371
>gi|422409721|ref|ZP_16486682.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes FSL F2-208]
gi|313608710|gb|EFR84539.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes FSL F2-208]
Length = 371
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 187/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 38 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 87
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 88 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 128
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G LL I+EL + +V+V+G N GKSTLIN
Sbjct: 129 TRAKEQGLAATD-VVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLINRII 186
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 187 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 244
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E AD ++
Sbjct: 245 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKADALY 302
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ GI LQPP +E G KL V + DI +GLGW ++ +G A +
Sbjct: 303 EKQAGIVLQPP------TEEGMETLPKL-VPYSFTIKEKADIVFSGLGWVTIP-EGGAKV 354
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 355 TAWVPEGVSATIRTSLV 371
>gi|47095444|ref|ZP_00233054.1| GTPase, putative [Listeria monocytogenes str. 1/2a F6854]
gi|254912165|ref|ZP_05262177.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254936493|ref|ZP_05268190.1| GTP-binding protein YqeH [Listeria monocytogenes F6900]
gi|386047143|ref|YP_005965475.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes J0161]
gi|47016265|gb|EAL07188.1| GTPase, putative [Listeria monocytogenes serotype 1/2a str. F6854]
gi|258609086|gb|EEW21694.1| GTP-binding protein YqeH [Listeria monocytogenes F6900]
gi|293590137|gb|EFF98471.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|345534134|gb|AEO03575.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes J0161]
Length = 366
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 186/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G LL I EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLAATD-VVLVSAEKGHGFDTLLEKIDELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E AD ++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKADALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ GI LQPP +E G KL V + DI +GLGW ++ +G A +
Sbjct: 298 EKQAGIVLQPP------TEEGMETLPKL-VPYSFTIKEKADIVFSGLGWVTIP-EGGAKV 349
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 350 TAWVPEGVSATIRTSLV 366
>gi|227534814|ref|ZP_03964863.1| GTP-binding protein [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|418002385|ref|ZP_12642504.1| GTP-binding protein YqeH [Lactobacillus casei UCD174]
gi|227187570|gb|EEI67637.1| GTP-binding protein [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|410544288|gb|EKQ18622.1| GTP-binding protein YqeH [Lactobacillus casei UCD174]
Length = 374
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 189/385 (49%), Gaps = 44/385 (11%)
Query: 234 KAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGV 293
KA ++ + + C RC LR+Y NE+A + D DF RL+ G +NA +
Sbjct: 32 KATLSKADPDDEIYCQRCFRLRHY----NEIAPVTLTDDDF-----LRLLNAIGESNA-L 81
Query: 294 VVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTR 353
+V V+D DF+G S+ L D + +LVG K D+LP ++P R
Sbjct: 82 IVNVIDIFDFNG--------SVIPGLHRFVGDNPV-------ILVGNKADVLPKSLNPNR 126
Query: 354 LDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
L W++ +AKA G + + L SA+K GV LL I++ R +V+V+G N GKST
Sbjct: 127 LKNWLQQQAKAQGLRPVVTM-LASAKKGFGVDELLDAIEKYRDHR-DVYVVGVTNTGKST 184
Query: 414 LINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
LIN K+ +T + PGTTL RI L L DTPG++H H M+ +
Sbjct: 185 LINRIIKELTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRHQMAHFVGPK 242
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIE 533
+ K+V ++P TY++ GQ + +GGL R D + + ++ ++LH K+E
Sbjct: 243 DLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRNSF--VIYTDNQLTLHRTKLE 300
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGL 593
NAD+ ++ HVG L PP +A E+ D V D+ AGLGW ++
Sbjct: 301 NADDFYQKHVGGLLSPP----QADEV---PDFPPLVRFEFTPKEKADLVFAGLGWITV-- 351
Query: 594 KGEASLTLWTY--DGIEITLREPLV 616
A +T+ Y G+++ LR +
Sbjct: 352 --PAGVTVAGYAPKGVDVLLRRAFI 374
>gi|227543936|ref|ZP_03973985.1| GTP-binding protein [Lactobacillus reuteri CF48-3A]
gi|338202609|ref|YP_004648754.1| GTP-binding protein [Lactobacillus reuteri SD2112]
gi|227186087|gb|EEI66158.1| GTP-binding protein [Lactobacillus reuteri CF48-3A]
gi|336447849|gb|AEI56464.1| GTP-binding protein [Lactobacillus reuteri SD2112]
Length = 375
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 190/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E KE GE+ C RC LR+Y NE+A + D DF RL+ +ANA
Sbjct: 33 KSALERGKETGEL-YCQRCFRLRHY----NEIAPVSLTDDDF-----LRLLNQIRDANA- 81
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG K DLLP +
Sbjct: 82 LIVYVVDVFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKEDLLPRSLRRP 126
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L W+R +A G ++ V LVSA+K+ + +LL I++ R +V+V+G N GKS
Sbjct: 127 KLTDWIRQQANIAGLRPIDTV-LVSAKKNHQIDHLLDVIEKYRHNR-DVYVVGVTNVGKS 184
Query: 413 TLINTFAK-KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
TLIN K + GVK +T + PGTTL + I L L DTPG++H M+ L+
Sbjct: 185 TLINQIIKQRTGVK-ELITTSRFPGTTLDKIEIP--LDDGHVLVDTPGIIHQEQMAHVLS 241
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
+ K+V +KE++P+TY++ GQ + +GG+ R D E + + N+ +H K
Sbjct: 242 PKDLKIVAPQKEIKPKTYQLNDGQTLFLGGVARFDYLHG--ERAGMVAYFDNNLPIHRTK 299
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ NAD + H+G L PP D + + ++ S DI GLGW ++
Sbjct: 300 LSNADNFYAKHLGDLLTPPTS-DEKDGFPPLERYEFHITEKS------DIVFEGLGWITV 352
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
K ++ W G+ +R ++
Sbjct: 353 PAK--TTVAAWVPKGVGALVRRAMI 375
>gi|16803531|ref|NP_465016.1| GTP-binding protein YqeH [Listeria monocytogenes EGD-e]
gi|386043802|ref|YP_005962607.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes 10403S]
gi|386050467|ref|YP_005968458.1| GTP-binding protein YqeH [Listeria monocytogenes FSL R2-561]
gi|404283983|ref|YP_006684880.1| GTPase [Listeria monocytogenes SLCC2372]
gi|404410792|ref|YP_006696380.1| GTPase [Listeria monocytogenes SLCC5850]
gi|405758539|ref|YP_006687815.1| GTPase [Listeria monocytogenes SLCC2479]
gi|16410920|emb|CAC99569.1| lmo1491 [Listeria monocytogenes EGD-e]
gi|345537036|gb|AEO06476.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes 10403S]
gi|346424313|gb|AEO25838.1| GTP-binding protein YqeH [Listeria monocytogenes FSL R2-561]
gi|404230618|emb|CBY52022.1| putative GTPase [Listeria monocytogenes SLCC5850]
gi|404233485|emb|CBY54888.1| putative GTPase [Listeria monocytogenes SLCC2372]
gi|404236421|emb|CBY57823.1| putative GTPase [Listeria monocytogenes SLCC2479]
Length = 366
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 187/378 (49%), Gaps = 49/378 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G LL I EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLAATD-VVLVSAEKGHGFDTLLEKIDELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E A+ ++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKAEALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSLGLKGEAS 598
+ G+ LQPP +D + K+ S+ V DI +GLGW ++ +G A
Sbjct: 298 EKQAGLVLQPPTEEDMKT--------LPKLVPYSFTVKEKADIVFSGLGWVTIP-EGGAK 348
Query: 599 LTLWTYDGIEITLREPLV 616
+T W +G+ T+R LV
Sbjct: 349 VTAWVPEGVSATIRTSLV 366
>gi|394992033|ref|ZP_10384826.1| GTPase YqeH [Bacillus sp. 916]
gi|393807049|gb|EJD68375.1| GTPase YqeH [Bacillus sp. 916]
Length = 366
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 187/373 (50%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ T G+ ++ ++V VVD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDFLNILHT-----IGDTDS-LIVKVVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + ++LVG K D+LP V RL +W++ AK
Sbjct: 82 NGSWINGLNRFVGGN---------------PIILVGNKADILPKSVKRERLVQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G L+ V+L+SA + G++ ++ I+ R +V+V+G N GKST IN K+
Sbjct: 127 EYGLKPLD-VFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L + LYDTPG+++ H M+ +++ + K++ +KE
Sbjct: 185 GEENIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVDKRDLKVLTPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S + + + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYMPNELMIHRTKLENADALYEKHA 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP G+D E + DI +GLGW ++ + + +T +
Sbjct: 301 GELLTPP-GKDHLDEFPELTPHTFTIKE-----GKTDIVFSGLGWVTVQ-QADKKITAYA 353
Query: 604 YDGIEITLREPLV 616
G+ + +R L+
Sbjct: 354 PKGVHVFVRRSLI 366
>gi|422419093|ref|ZP_16496048.1| ribosome biogenesis GTPase YqeH [Listeria seeligeri FSL N1-067]
gi|313633186|gb|EFS00066.1| ribosome biogenesis GTPase YqeH [Listeria seeligeri FSL N1-067]
Length = 366
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 187/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ K + ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILNQISTKQA------LIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGNN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA + G LL I+EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLSATD-VVLVSAERGHGFDILLEKIEELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ D K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTDTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E AD ++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKADALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ G LQPP +E G KL V T DI +GLGW ++ +G A +
Sbjct: 298 EKQAGFVLQPP------TEEGMKTLPKL-VPYTFNVKEKADIVFSGLGWVTIP-EGGAKV 349
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 350 TAWVPEGVSATIRTSLV 366
>gi|384266179|ref|YP_005421886.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|380499532|emb|CCG50570.1| GTP-binding protein YqeH [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
Length = 366
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 187/373 (50%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ T G+ ++ ++V VVD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDFLNILHT-----IGDTDS-LIVKVVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + ++LVG K D+LP V RL +W++ AK
Sbjct: 82 NGSWINGLNRFVGGN---------------PIILVGNKADILPKSVKRERLVQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G L+ V+L+SA + G++ ++ I+ R +V+V+G N GKST IN K+
Sbjct: 127 EYGLKPLD-VFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L + LYDTPG+++ H M+ +++ + K++ +KE
Sbjct: 185 GEENIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVDKRDLKVLTPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S + + + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYMPNELMIHRTKLENADALYEKHA 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP G+D E + DI +GLGW ++ + + +T +
Sbjct: 301 GELLTPP-GKDHLDEFPELTPHTFTIKEGK-----TDIVFSGLGWVTVQ-QADKKITAYA 353
Query: 604 YDGIEITLREPLV 616
G+ + +R L+
Sbjct: 354 PKGVHVFVRRSLI 366
>gi|398311510|ref|ZP_10514984.1| GTPase YqeH [Bacillus mojavensis RO-H-1]
Length = 366
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 189/373 (50%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ G ++ +VV +VD DF
Sbjct: 32 ESVICQRCFRLKNY----NEIQDVSLTDDDF-----LNILHGIGETDS-LVVKIVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L+ +L P ++LVG K D+LP + RL +W++ AK
Sbjct: 82 NG--------SWINGLQ------RLVGGNP-ILLVGNKADILPKSLKRERLIQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+LVSA + G+R ++ I+ + +V+V+G N GKST IN K+
Sbjct: 127 ELGLKPID-VFLVSAGRGQGIREVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L + LYDTPG+++ H M+ +N+ + K++ +KE
Sbjct: 185 GEDNIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVNKKDLKVLSPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S E + + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNDQQTLYFGGLARFDY--VSGERAAFVCYMPNELMIHRTKLENADALYEKHA 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP G+D E +L + DI +GLGW ++ + +T +
Sbjct: 301 GELLTPP-GKDDMDEF-----PELVAHTFTMKEQKTDIVFSGLGWVTVH-DADKKITAYA 353
Query: 604 YDGIEITLREPLV 616
G+ + +R L+
Sbjct: 354 PKGVHVFVRRSLI 366
>gi|116492472|ref|YP_804207.1| GTP-binding protein YqeH [Pediococcus pentosaceus ATCC 25745]
gi|116102622|gb|ABJ67765.1| Predicted GTPase [Pediococcus pentosaceus ATCC 25745]
Length = 370
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 124/378 (32%), Positives = 187/378 (49%), Gaps = 46/378 (12%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E G++ C RC LR+Y NE+A I D DF +L+ ++N+ +VV VVD
Sbjct: 37 ESGQL-YCQRCFRLRHY----NEIAPVDISDDDF-----RKLLSQISDSNS-LVVYVVDM 85
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G SL L D + +LVG K D+ P + R+ W+R
Sbjct: 86 FDFNG--------SLIPGLHRFIGDNPV-------LLVGNKEDVFPKSIKRHRMKEWLRQ 130
Query: 361 RAKAGGA-PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
+AKA G P+ V + SA+ V L +++L R +V+V+G N GKSTLIN+
Sbjct: 131 QAKANGILPE--DVVITSAKNASSVEALFNAVEKLRKGR-DVYVVGVTNVGKSTLINSLI 187
Query: 419 AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMV 478
A + G+K +T + PGTTL RI + L DTPG++H M+ L ++ K V
Sbjct: 188 AIRNGIK-DVITTSRFPGTTLD--RIEIPFDDHSNLIDTPGIIHADQMAHVLAAEDLKYV 244
Query: 479 EIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEI 538
+K ++PR +++ Q + VG L R D + + VT + N+ +H K+ENAD
Sbjct: 245 SPQKTIKPRVFQLNSQQTLFVGALARFDYEHSEGS---VTAYFDNNLMVHRTKLENADNF 301
Query: 539 WKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEAS 598
++ H G L PP + A K KL S D + DI GLGW S + ++
Sbjct: 302 YEKHAGELLTPPTADNLA------KMPKLVAHQFSADQDS-DIVFEGLGWIS--VPEGST 352
Query: 599 LTLWTYDGIEITLREPLV 616
+T W +GI + +R L+
Sbjct: 353 ITAWAPEGISVVIRRSLI 370
>gi|261418457|ref|YP_003252139.1| GTP-binding protein YqeH [Geobacillus sp. Y412MC61]
gi|319767582|ref|YP_004133083.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y412MC52]
gi|261374914|gb|ACX77657.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y412MC61]
gi|317112448|gb|ADU94940.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y412MC52]
Length = 369
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 188/377 (49%), Gaps = 46/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NEV + + D DF ++ G + A +VV +VD DF
Sbjct: 35 EEIICQRCFRLKHY----NEVQDVPLDDSDF-----LNMLHRIGESKA-LVVNIVDIFDF 84
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
+G P+ AA++ ++LVG K DLLP V +L RW+R
Sbjct: 85 NGSWIPGLPRFAAEN-------------------PILLVGNKADLLPRSVKYPKLLRWMR 125
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
A+ G ++ V LVSA K +G+ ++ I G+V+V+G N GKST IN
Sbjct: 126 RMAEELGLCPVD-VCLVSAAKGIGMAKVMEAINRYR-EGGDVYVVGCTNVGKSTFINRII 183
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
++ K + +T + PGTTL ++ I L A LYDTPG+++ H M+ ++ + K++
Sbjct: 184 EEATGKGNVITTSYFPGTTLDMIEIP--LEGGATLYDTPGIINHHQMAHFVDARDLKIIT 241
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
++E+ PR Y++ GQ + GGL RLD + + + + +++H K+E AD ++
Sbjct: 242 PKREIHPRVYQLNEGQTLFFGGLARLDYIKGGRRSF--VCYMANELTVHRTKLEKADSLY 299
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
N +G L PP + A+E R L V DI +GLGW + G A L
Sbjct: 300 ANQLGDLLSPP-NKRYAAEFPPLVPRSLSVKERK-----TDIVFSGLGWVTCNDPG-AQL 352
Query: 600 TLWTYDGIEITLREPLV 616
+ G+++ +R+ L+
Sbjct: 353 VVHAPKGVDVFIRQSLI 369
>gi|422738398|ref|ZP_16793595.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2141]
gi|315145751|gb|EFT89767.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2141]
Length = 369
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 192/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GEV C RC LR+Y N++ + + D DF RL+ G +A
Sbjct: 27 KTAFEKGMETGEV-YCQRCFRLRHY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP + T
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKT 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R RA G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 121 KMVQWMRERAHEAGLRPVD-VLLTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S +++LH K
Sbjct: 237 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLNLHRTKT 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDR-KLKVSGTSWDVNGIDIAAAGLGWFSL 591
AD ++ HVG LQPP RA E+ + + + + S DI AGLGW ++
Sbjct: 295 ATADAFYEKHVGGLLQPP----RADEVAEFPELVRFEFSVKE----KTDIVFAGLGWITV 346
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
G + W G+++ R+ L+
Sbjct: 347 TEPG--VVAGWAPKGVDVLRRKALI 369
>gi|421730914|ref|ZP_16170040.1| GTPase YqeH [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|407075068|gb|EKE48055.1| GTPase YqeH [Bacillus amyloliquefaciens subsp. plantarum M27]
Length = 366
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 188/373 (50%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ T G+ ++ ++V VVD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDFLNILHT-----IGDTDS-LIVKVVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + ++LVG K D+LP V RL +W++ AK
Sbjct: 82 NGSWINGLNRFVGGN---------------PIILVGNKADILPKSVKRERLVQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G L+ V+L+SA + G++ ++ I+ R +V+V+G N GKST IN K+
Sbjct: 127 EYGLKPLD-VFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L + LYDTPG+++ H M+ +++ + K++ +KE
Sbjct: 185 GEENIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVDKRDLKVLTPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S + + + +H K+ENAD ++ H
Sbjct: 243 LKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYMPNELMIHRTKLENADALYDKHA 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP G+D E +L + DI +GLGW ++ + + +T +
Sbjct: 301 GELLTPP-GKDHLDEF-----PELTAHTFTIKEGKTDIVFSGLGWVTVQ-QADKKITAYA 353
Query: 604 YDGIEITLREPLV 616
G+ + +R L+
Sbjct: 354 PKGVHVFVRRSLI 366
>gi|421453058|ref|ZP_15902414.1| GTP-binding protein [Streptococcus salivarius K12]
gi|400181367|gb|EJO15634.1| GTP-binding protein [Streptococcus salivarius K12]
Length = 372
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 197/401 (49%), Gaps = 47/401 (11%)
Query: 219 ERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVI 278
E +K + A KKA E GE+ C RC LR+Y NE+ + I D +F
Sbjct: 16 EDKEKAGFTPASSIKKAEET----GEL-YCQRCFRLRHY----NEIVDVHITDDEF---- 62
Query: 279 ATRLMKPSGNANAGVVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVL 337
+L+ G+++A +VV VVD DF+G + P + D ++L
Sbjct: 63 -LKLLHEVGDSDA-LVVNVVDIFDFNGSIIPG------LSRFVSGND----------VLL 104
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
VG K D+LP V ++ +W+ RA G ++ V L SA+ ++ L+ I++L
Sbjct: 105 VGNKKDILPKSVKDGKVTQWLTERAHEEGMRPVD-VMLTSAQNHHAIKELIQRIEKLRKG 163
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
R +V+V+G N GKSTLIN K+ +T + PGTTL + I L + ++DT
Sbjct: 164 R-DVYVVGVTNVGKSTLINAIIKEITGDKDVITTSRFPGTTLDKIEIP--LDDGSYIFDT 220
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PG++H H M+ L+ + K V +KE++P+TY++ GQ++ +GGL R D + +
Sbjct: 221 PGIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQSLFLGGLGRFDFIDGNKQGF-- 278
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
T + N+ LH K+E AD + HVG L PP G ++ + V +
Sbjct: 279 TAFFDNNLKLHRTKLEGADAFYDKHVGSLLMPP-GPKELADFPKLVRHEFTVKDKT---- 333
Query: 578 GIDIAAAGLGWFSLGLKGE--ASLTLWTYDGIEITLREPLV 616
DI +GLGW + K + + W +G+ + +R+ ++
Sbjct: 334 --DIVFSGLGWIRVQGKADQPTIVAAWAPEGVGVAVRKAII 372
>gi|450137692|ref|ZP_21871776.1| GTP-binding protein YqeH [Streptococcus mutans NLML1]
gi|449234970|gb|EMC33952.1| GTP-binding protein YqeH [Streptococcus mutans NLML1]
Length = 368
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 191/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHCHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL+R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLVRFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIVAWAPEGVAVVTRKSLI 368
>gi|420262361|ref|ZP_14765002.1| GTP-binding protein [Enterococcus sp. C1]
gi|394770118|gb|EJF49922.1| GTP-binding protein [Enterococcus sp. C1]
Length = 372
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 188/384 (48%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF RL+ G +A
Sbjct: 30 QSALEKGLESGEV-YCQRCFRLRHY----NEIQDVALTDDDF-----LRLLNEIGEKDA- 78
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP + +
Sbjct: 79 LIVNVVDIFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKVDILPKSLKKS 123
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W++ RA G ++ V L SA+K + LL I+ R +V+V+G N GKS
Sbjct: 124 KMTQWMKERAYEVGLRPVD-VLLTSAKKPGETQALLQAIETYREGR-DVYVVGVTNVGKS 181
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K+ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 182 TLINQIIKQTAGINELITTSRFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 239
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K+V KE++P+ Y++ Q + +GGL R D Q E + + +V++H K+
Sbjct: 240 KDLKIVAPAKEIKPKVYQLNPEQTLFLGGLARFDFIQG--ERSSFVAYVANDVAIHRTKL 297
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
ADE ++ HVG LQPP RA E+ + + V DI AGLGW +
Sbjct: 298 SKADEFYEKHVGGLLQPP----RADEVADFPEL---VRFEFSIKEKTDIVFAGLGWIT-- 348
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ + W G+++ R+ LV
Sbjct: 349 ITKPCVIAGWAPKGVDVLRRKALV 372
>gi|387899200|ref|YP_006329496.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
gi|387173310|gb|AFJ62771.1| GTP-binding protein [Bacillus amyloliquefaciens Y2]
Length = 371
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 187/373 (50%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ T G+ ++ ++V VVD DF
Sbjct: 37 ENVICQRCFRLKNY----NEIQDVSLTDDDFLNILHT-----IGDTDS-LIVKVVDIFDF 86
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + ++LVG K D+LP V RL +W++ AK
Sbjct: 87 NGSWINGLNRFVGGN---------------PIILVGNKADILPKSVKRERLVQWMKREAK 131
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G L+ V+L+SA + G++ ++ I+ R +V+V+G N GKST IN K+
Sbjct: 132 EYGLKPLD-VFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGKSTFINRIIKEVS 189
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L + LYDTPG+++ H M+ +++ + K++ +KE
Sbjct: 190 GEENIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVDKRDLKVLTPKKE 247
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S + + + +H K+ENAD +++ H
Sbjct: 248 LKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYMPNELMIHRTKLENADALYEKHA 305
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP G+D E + DI +GLGW ++ + + +T +
Sbjct: 306 GELLTPP-GKDHLDEFPELTPHTFTIKEGK-----TDIVFSGLGWVTVQ-QADKKITAYA 358
Query: 604 YDGIEITLREPLV 616
G+ + +R L+
Sbjct: 359 PKGVHVFVRRSLI 371
>gi|56421060|ref|YP_148378.1| GTP-binding protein YqeH [Geobacillus kaustophilus HTA426]
gi|375009615|ref|YP_004983248.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56380902|dbj|BAD76810.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
gi|359288464|gb|AEV20148.1| hypothetical protein GTCCBUS3UF5_28450 [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 369
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 188/377 (49%), Gaps = 46/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NEV + + D DF ++ G + A +VV +VD DF
Sbjct: 35 EEIICQRCFRLKHY----NEVQDVPLDDSDF-----LNMLHRIGESKA-LVVNIVDIFDF 84
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
+G P+ AA++ ++LVG K DLLP V +L RW+R
Sbjct: 85 NGSWIPGLPRFAAEN-------------------PILLVGNKADLLPRSVKYPKLLRWMR 125
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
A+ G ++ V LVSA K +G+ ++ I G+V+V+G N GKST IN
Sbjct: 126 RMAEELGLRPVD-VCLVSAAKGIGMAKVMEAINRYR-EGGDVYVVGCTNVGKSTFINRII 183
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
++ K + +T + PGTTL ++ I L A LYDTPG+++ H M+ ++ + K++
Sbjct: 184 EEATGKGNVITTSYFPGTTLDMIEIP--LEGGATLYDTPGIINHHQMAHFVDARDLKIIT 241
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
++E+ PR Y++ GQ + GGL RLD + + + + +++H K+E AD ++
Sbjct: 242 PKREIHPRVYQLNEGQTLFFGGLARLDYIKGGRRSF--VCYMANELTVHRTKLEKADSLY 299
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
N +G L PP + A+E R L V DI +GLGW + G A L
Sbjct: 300 ANQLGDLLSPP-NKRYAAEFPPLVPRSLSVKERK-----TDIVFSGLGWVTCNDPG-AQL 352
Query: 600 TLWTYDGIEITLREPLV 616
+ G+++ +R+ L+
Sbjct: 353 VVHAPKGVDVFIRQSLI 369
>gi|350266771|ref|YP_004878078.1| hypothetical protein GYO_2837 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599658|gb|AEP87446.1| YqeH [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 366
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 187/373 (50%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ G ++ +VV +VD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDF-----LNILHGIGETDS-LVVKIVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L+ +L P ++LVG K D+LP + RL +W++ AK
Sbjct: 82 NG--------SWINGLQ------RLVGGNP-ILLVGNKADILPKSLKRERLIQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+LVSA + G+R ++ I+ + +V+V+G N GKST IN K+
Sbjct: 127 ELGLKPVD-VFLVSAGRGQGIREVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRVIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL + I L + LYDTPG+++ H M+ +N+ + K++ +KE
Sbjct: 185 GEEDIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVNKKDLKILSPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S E + + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNDQQTLYFGGLARFDY--VSGERSPFICYMPNELMIHRTKLENADALYEKHA 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP G+D E + T DI +GLGW ++ + +T +
Sbjct: 301 GELLTPP-GKDEMDEFPELVAHTFTIKDTK-----TDIVFSGLGWVTVH-DADKKVTAYA 353
Query: 604 YDGIEITLREPLV 616
G+ + +R L+
Sbjct: 354 PKGVHVFVRRSLI 366
>gi|429505976|ref|YP_007187160.1| GTPase YqeH [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|429487566|gb|AFZ91490.1| GTPase YqeH [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
Length = 366
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 189/373 (50%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ T G+ ++ ++V VVD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDFLNILHT-----IGDTDS-LIVKVVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + ++LVG K D+LP V RL +W++ AK
Sbjct: 82 NGSWINGLNRFVGGN---------------PIILVGNKADILPKSVKRERLVQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G L+ V+L+SA + G++ ++ I+ R +V+V+G N GKST IN K+
Sbjct: 127 EYGLKPLD-VFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L + LYDTPG+++ H M+ +++ + K++ +KE
Sbjct: 185 GEENIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVDKRDLKVLTPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S + + + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNEKQTLYFGGLARFDY--VSGDKTAFVCYMPNELMIHRTKLENADALYEKHA 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP G+D E +L + DI +GLGW ++ + + +T +
Sbjct: 301 GELLTPP-GKDHLDEF-----PELTAHTFTIKEGKTDIVFSGLGWVTVQ-QEDKKITAYA 353
Query: 604 YDGIEITLREPLV 616
G+ + +R L+
Sbjct: 354 PKGVHVFVRRSLI 366
>gi|392989973|ref|YP_006488566.1| GTPase YqeH [Enterococcus hirae ATCC 9790]
gi|392337393|gb|AFM71675.1| GTPase YqeH [Enterococcus hirae ATCC 9790]
Length = 369
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 186/384 (48%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GEV C RC LR+Y NE+ + + D DF RL+ G +A
Sbjct: 27 KAALEKGLESGEV-YCQRCFRLRHY----NEIQDVSLTDDDF-----LRLLNELGQEDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L + + +LVG KVD+LP +
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFVGNNPV-------LLVGNKVDILPKSLKKP 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W++ RA G + V L SA+K + NLL I+E R +V+++G N GKS
Sbjct: 121 KMIQWMKERAHEAGLRPVE-VLLTSAKKANEMENLLKKIEEYREGR-DVYIVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIKNTAGVKDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ +++ KE++P+ Y++ GQ + +GGL R D S + + S +V++H K+
Sbjct: 237 KDLRIIAPTKEIKPKGYQLNEGQTLFLGGLARFDF--ISGQRGSFIAYVSNDVTIHRTKL 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
ADE + HVG LQPP D +E + V + DI AGLGW +
Sbjct: 295 AKADEFYVKHVGGLLQPP-RPDEVNEFPELVRFEFSVKEKT------DIVFAGLGWIT-- 345
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ A + W G+ + R+ L+
Sbjct: 346 VTQPAVVAGWAPKGVNVMKRKALI 369
>gi|337281510|ref|YP_004620981.1| GTP-binding protein [Streptococcus parasanguinis ATCC 15912]
gi|387879069|ref|YP_006309372.1| hypothetical protein Spaf_0549 [Streptococcus parasanguinis FW213]
gi|335369103|gb|AEH55053.1| GTP-binding protein [Streptococcus parasanguinis ATCC 15912]
gi|386792524|gb|AFJ25559.1| hypothetical protein Spaf_0549 [Streptococcus parasanguinis FW213]
Length = 368
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 191/394 (48%), Gaps = 61/394 (15%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVHLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G N
Sbjct: 116 VKDSKVTHWLMERAHEEGMRPVD-VVLTSAQNKSAIKDLMEKIEQYRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L K V +KE++P+TY++ GQ + +GGL R D + + T + + LH
Sbjct: 232 YLTAKNLKYVSPKKEIKPKTYQLNPGQTLFLGGLGRFDFIKGEKQGF--TAFFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGIDIA 582
K+E A + HVG L PP +++ S T KD+ D+
Sbjct: 290 RTKLEGATAFYDKHVGGLLTPPNSKEKEEFPPLVSHEFTIKDKT-------------DLV 336
Query: 583 AAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+GLGW + + GEA + +W +G+ + R+ ++
Sbjct: 337 ISGLGW--IRVNGEAKVAVWAPEGVAVVTRKAII 368
>gi|256616683|ref|ZP_05473529.1| nitric-oxide synthase [Enterococcus faecalis ATCC 4200]
gi|256596210|gb|EEU15386.1| nitric-oxide synthase [Enterococcus faecalis ATCC 4200]
Length = 375
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 191/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GEV C RC LR+Y N++ + + D DF RL+ G +A
Sbjct: 33 KTAFEKGMETGEV-YCQRCFRLRHY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 81
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP + T
Sbjct: 82 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKT 126
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R RA G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 127 KMVQWMRERAHEAGLRPVD-VLLTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKS 184
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 185 TLINQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 242
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S ++ LH K
Sbjct: 243 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLKLHRTKT 300
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
AD ++ HVG LQPP RA E+ + + + + V DI AGLGW ++
Sbjct: 301 ATADAFYEKHVGGLLQPP----RADEVAEFPE----LVRFEFSVKEKTDIVFAGLGWITV 352
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
G + W G+++ R+ L+
Sbjct: 353 TEPG--VVAGWAPKGVDVLRRKALI 375
>gi|417917766|ref|ZP_12561325.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis SK236]
gi|342830403|gb|EGU64742.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis SK236]
Length = 368
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 191/394 (48%), Gaps = 61/394 (15%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVHLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G N
Sbjct: 116 VKDSKVTHWLMERAHEEGMRPVD-VVLTSAQNKSAIKDLMEKIEQYRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L K V +KE++P+TY++ GQ + +GGL R D + + T + + LH
Sbjct: 232 YLTAKNLKYVSPKKEIKPKTYQLNPGQTLFLGGLGRFDFIKGEKQGF--TAFFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGIDIA 582
K+E A + HVG L PP +++ S T KD+ D+
Sbjct: 290 RTKLEGATAFYDKHVGGLLTPPNSKEKEEFPPLVSHEFTIKDKT-------------DLV 336
Query: 583 AAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+GLGW + + GEA + +W +G+ + R+ ++
Sbjct: 337 ISGLGW--IRVSGEAKVAVWAPEGVAVVTRKAII 368
>gi|386726062|ref|YP_006192388.1| hypothetical protein B2K_28655 [Paenibacillus mucilaginosus K02]
gi|384093187|gb|AFH64623.1| hypothetical protein B2K_28655 [Paenibacillus mucilaginosus K02]
Length = 368
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 193/372 (51%), Gaps = 38/372 (10%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
+C RC ++NY NE + + DF +L+ G ++ +VV +VD DF+G
Sbjct: 34 VICQRCFRIKNY----NEASGITLNQDDF-----LKLLGHVGTTDS-LVVNIVDLFDFEG 83
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
S+ L A+ P ++LV K+DLLP + R+ WV+ +AK
Sbjct: 84 --------SMISGL------ARFVGNNP-IILVVNKIDLLPKVTNYNRILNWVQRQAKEA 128
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G K+ + L SARK++G ++ + E R +++V+GA N GKSTLIN
Sbjct: 129 GL-KVADIVLCSARKNMGFERVIEALDEHRKGR-DIYVVGATNVGKSTLINRLIHDYSDL 186
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
++LT + PGTTL ++RI L + DTPG+++ H ++ +N+ + V K ++
Sbjct: 187 DAELTVSQYPGTTLDLVRIP--LDDGGSIIDTPGIVYKHRLTELVNKKDLMKVMPDKPMK 244
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P +++ GQ+V+ G L R D Q ++ T + S ++ H K+E ADE+++NH G+
Sbjct: 245 PLVFQLNSGQSVYFGALARFDFLQGERQSF--TFYVSNSLEAHRTKLEKADELYENHKGV 302
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL-GLKGEASLTLWTY 604
LQPP+ ++ EL +++ +D++ +GLGW G++G A L +
Sbjct: 303 LLQPPVLEN-LDELPKLTKHAIRIPKGG----NLDVSISGLGWVKANGVQG-AELAIHVP 356
Query: 605 DGIEITLREPLV 616
G+++ +RE L+
Sbjct: 357 RGVKVAVRESLI 368
>gi|366085737|ref|ZP_09452222.1| GTPase YqeH [Lactobacillus zeae KCTC 3804]
Length = 374
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 187/371 (50%), Gaps = 44/371 (11%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+A + D DF RL+ G +NA ++V V+D DF+G
Sbjct: 46 CQRCFRLRHY----NEIAPVTLTDDDF-----LRLLNAIGESNA-LIVNVIDIFDFNG-- 93
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
S+ L D + +LVG K D+LP ++P RL W++ +AKA G
Sbjct: 94 ------SVIPGLHRFVGDNPV-------ILVGNKADVLPKSLNPNRLKNWLQQQAKAQGL 140
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
+ L SA+K GV LL+ I++ R +V+V+G N GKSTLIN K+ +
Sbjct: 141 RPV-ATMLASAKKGFGVDELLSAIEKYREHR-DVYVVGVTNTGKSTLINRIIKELTGVEN 198
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL RI L L DTPG++H H M+ + + K+V ++P
Sbjct: 199 LITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRHQMAHFVGPKDLKLVSPTSVIKPA 256
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ GQ + +GGL R D + ++ ++ + LH K+ NAD+ + HVG L
Sbjct: 257 TYQLNEGQTIFLGGLARFDYLRGGRQSF--VIYTDNQLPLHRTKLINADDFYHKHVGGLL 314
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY--D 605
PP +A E+ + ++ T + + D+ AGLGW ++ A +T+ Y
Sbjct: 315 APP----QADEVAQFPPL-VRFEFTPKEKS--DLVFAGLGWITV----PAGVTIAGYAPK 363
Query: 606 GIEITLREPLV 616
G+++ LR+ +
Sbjct: 364 GVDVLLRKAFI 374
>gi|116495171|ref|YP_806905.1| GTP-binding protein YqeH [Lactobacillus casei ATCC 334]
gi|385820393|ref|YP_005856780.1| hypothetical protein LC2W_1864 [Lactobacillus casei LC2W]
gi|385823580|ref|YP_005859922.1| hypothetical protein LCBD_1885 [Lactobacillus casei BD-II]
gi|417987069|ref|ZP_12627631.1| GTP-binding protein YqeH [Lactobacillus casei 32G]
gi|417989965|ref|ZP_12630460.1| GTP-binding protein YqeH [Lactobacillus casei A2-362]
gi|417993212|ref|ZP_12633561.1| GTP-binding protein YqeH [Lactobacillus casei CRF28]
gi|417996556|ref|ZP_12636835.1| GTP-binding protein YqeH [Lactobacillus casei M36]
gi|417999427|ref|ZP_12639636.1| GTP-binding protein YqeH [Lactobacillus casei T71499]
gi|418005414|ref|ZP_12645407.1| GTP-binding protein YqeH [Lactobacillus casei UW1]
gi|418013175|ref|ZP_12652828.1| GTP-binding protein YqeH [Lactobacillus casei Lpc-37]
gi|116105321|gb|ABJ70463.1| Predicted GTPase [Lactobacillus casei ATCC 334]
gi|327382720|gb|AEA54196.1| hypothetical protein LC2W_1864 [Lactobacillus casei LC2W]
gi|327385907|gb|AEA57381.1| hypothetical protein LCBD_1885 [Lactobacillus casei BD-II]
gi|410524133|gb|EKP99050.1| GTP-binding protein YqeH [Lactobacillus casei 32G]
gi|410531684|gb|EKQ06400.1| GTP-binding protein YqeH [Lactobacillus casei CRF28]
gi|410535402|gb|EKQ10027.1| GTP-binding protein YqeH [Lactobacillus casei M36]
gi|410536787|gb|EKQ11378.1| GTP-binding protein YqeH [Lactobacillus casei A2-362]
gi|410539058|gb|EKQ13596.1| GTP-binding protein YqeH [Lactobacillus casei T71499]
gi|410546811|gb|EKQ21055.1| GTP-binding protein YqeH [Lactobacillus casei UW1]
gi|410556122|gb|EKQ30044.1| GTP-binding protein YqeH [Lactobacillus casei Lpc-37]
Length = 374
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 187/385 (48%), Gaps = 44/385 (11%)
Query: 234 KAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGV 293
KA ++ + + C RC LR+Y NE+A + D DF RL+ G +NA +
Sbjct: 32 KATLSKADPDDEIYCQRCFRLRHY----NEIAPVTLTDDDF-----LRLLNAIGESNA-L 81
Query: 294 VVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTR 353
+V V+D DF+G S+ L D + +LVG K D+LP ++P R
Sbjct: 82 IVNVIDIFDFNG--------SVIPGLHRFVGDNPV-------ILVGNKADVLPKSLNPNR 126
Query: 354 LDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
L W++ +AKA G + L SA+K GV LL I++ R +V+V+G N GKST
Sbjct: 127 LKNWLQQQAKAQGLRPV-ATMLASAKKGFGVDELLDAIEKYRDHR-DVYVVGVTNTGKST 184
Query: 414 LINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
LIN K+ +T + PGTTL RI L L DTPG++H H M+ +
Sbjct: 185 LINRIIKELTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRHQMAHFVGPK 242
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIE 533
+ K+V ++P TY++ GQ + +GGL R D + + ++ ++LH K+E
Sbjct: 243 DLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRNSF--VIYTDNQLTLHRTKLE 300
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGL 593
NAD+ ++ HVG L PP + E+ D V D+ AGLGW ++
Sbjct: 301 NADDFYQKHVGGLLSPP----QPDEV---PDFPPLVRFEFTPKEKADLVFAGLGWITV-- 351
Query: 594 KGEASLTLWTY--DGIEITLREPLV 616
A +T+ Y G+++ LR +
Sbjct: 352 --PAGVTVAGYAPKGVDVLLRRAFI 374
>gi|450092066|ref|ZP_21855759.1| GTP-binding protein YqeH [Streptococcus mutans W6]
gi|450150197|ref|ZP_21876491.1| GTP-binding protein YqeH [Streptococcus mutans 14D]
gi|449218759|gb|EMC18758.1| GTP-binding protein YqeH [Streptococcus mutans W6]
gi|449233832|gb|EMC32879.1| GTP-binding protein YqeH [Streptococcus mutans 14D]
Length = 368
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 190/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGVRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADTFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|422719674|ref|ZP_16776305.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0017]
gi|315033123|gb|EFT45055.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0017]
Length = 369
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 191/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GEV C RC LR+Y N++ + + D DF RL+ G +A
Sbjct: 27 KTAFEKGMETGEV-YCQRCFRLRHY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP + T
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKT 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R RA G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 121 KMVQWMRERAHEAGLRPVD-VLLTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S ++ LH K
Sbjct: 237 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLKLHRTKT 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
AD ++ HVG LQPP RA E+ + + + + V DI AGLGW ++
Sbjct: 295 ATADAFYEKHVGGLLQPP----RADEVAEFPE----LVRFEFSVKEKTDIVFAGLGWITV 346
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
G + W G+++ R+ L+
Sbjct: 347 TEPG--VVAGWAPKGVDVLRRKALI 369
>gi|194017759|ref|ZP_03056369.1| ribosome biogenesis GTPase YqeH [Bacillus pumilus ATCC 7061]
gi|194010659|gb|EDW20231.1| ribosome biogenesis GTPase YqeH [Bacillus pumilus ATCC 7061]
Length = 366
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 190/374 (50%), Gaps = 40/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + + DF ++ G ++ ++V VVD DF
Sbjct: 32 EDVICQRCFRLKNY----NEIQDVSLTEDDF-----LNILHSIGETDS-LIVKVVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + ++ + ++LVG KVD+LP V RL W++ AK
Sbjct: 82 NGSWINGLSRIVGGN---------------PILLVGNKVDILPKSVKKDRLIHWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+L+SA + GV ++ I R NV+V+G N GKST IN K+
Sbjct: 127 ENGLNPID-VFLISASRGQGVPEVMEAIDHYREGR-NVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
K + +T + PGTTL + I L + L+DTPG+++ H M+ +++++ K++ +KE
Sbjct: 185 GKENVITTSQYPGTTLDAIEIP--LDDGSALFDTPGIINRHQMAHYVSKNDLKILTPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPN-VSLHLGKIENADEIWKNH 542
L+PRT+++ Q ++ GGL R D + + V PN +++H K+ENAD++++ H
Sbjct: 243 LKPRTFQLNEAQTLYFGGLARFDYVKGGRTSF---VCYMPNELNIHRTKLENADDLYEKH 299
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP S+ G L + D +DI +GLGW + G+ + ++
Sbjct: 300 AGELLSPP------SKEGMEDFPPLVPHTFTIDQPKMDIVFSGLGWITANDAGK-QIKVY 352
Query: 603 TYDGIEITLREPLV 616
G+ + +R L+
Sbjct: 353 APKGVHVFMRRSLI 366
>gi|450125814|ref|ZP_21867843.1| GTP-binding protein YqeH [Streptococcus mutans U2A]
gi|449232058|gb|EMC31197.1| GTP-binding protein YqeH [Streptococcus mutans U2A]
Length = 368
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 189/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G + C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGRI-YCQRCFRLRHY----NEITDVYISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDQQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|422879449|ref|ZP_16925915.1| GTP-binding protein [Streptococcus sanguinis SK1059]
gi|422929294|ref|ZP_16962236.1| GTP-binding protein [Streptococcus sanguinis ATCC 29667]
gi|422932265|ref|ZP_16965196.1| GTP-binding protein [Streptococcus sanguinis SK340]
gi|332366161|gb|EGJ43917.1| GTP-binding protein [Streptococcus sanguinis SK1059]
gi|339615110|gb|EGQ19793.1| GTP-binding protein [Streptococcus sanguinis ATCC 29667]
gi|339619049|gb|EGQ23639.1| GTP-binding protein [Streptococcus sanguinis SK340]
Length = 368
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 190/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDSKVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEYCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K V +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+E A + + HVG L PP+G++R E + + + DI +GLGW
Sbjct: 290 RTKLEGASDFYDKHVGSLLVPPVGKER-EEFPALVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 343 IR--VSGPARVAGWAPEGVAVVTRKAII 368
>gi|296333274|ref|ZP_06875727.1| GTP-binding protein YqeH [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675222|ref|YP_003866894.1| ribosome 30S assembly GTPase [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296149472|gb|EFG90368.1| GTP-binding protein YqeH [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413466|gb|ADM38585.1| GTPase involved in ribosome 30S assembly [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 366
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 187/373 (50%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ G ++ +VV +VD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDF-----LNILHGIGETDS-LVVKIVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L+ +L P ++LVG K D+LP + RL +W++ AK
Sbjct: 82 NG--------SWINGLQ------RLVGGNP-ILLVGNKADILPKSLKRERLIQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+LVSA + G+R ++ I+ + +V+V+G N GKST IN K+
Sbjct: 127 ELGLKPVD-VFLVSAGRGQGIREVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRVIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL + I L + LYDTPG+++ H M+ +N+ + K++ +KE
Sbjct: 185 GEEDIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVNKKDLKILSPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S E + + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNDQQTLYFGGLARFDY--ISGERSPFICYMPNELMIHRTKLENADALYEKHA 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP G+D E + T DI +GLGW ++ + +T +
Sbjct: 301 GELLTPP-GKDEMDEFPELVAHTFTIKDTK-----TDIVFSGLGWVTVH-DADKKVTAYA 353
Query: 604 YDGIEITLREPLV 616
G+ + +R L+
Sbjct: 354 PKGVHVFVRRSLI 366
>gi|297529309|ref|YP_003670584.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. C56-T3]
gi|297252561|gb|ADI26007.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. C56-T3]
Length = 369
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 188/377 (49%), Gaps = 46/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NEV + + D DF ++ G + A +VV +VD DF
Sbjct: 35 EEIICQRCFRLKHY----NEVQDVPLDDSDF-----LNMLHRIGESKA-LVVNIVDIFDF 84
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
+G P+ AA++ ++LVG K DLLP V +L RW+R
Sbjct: 85 NGSWIPGLPRFAAEN-------------------PILLVGNKADLLPRSVKYPKLLRWMR 125
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
A+ G ++ V LVSA K +G+ ++ I G+V+V+G N GKST IN
Sbjct: 126 RMAEELGLCPVD-VCLVSAAKGIGMAKVMEAINRYR-EGGDVYVVGCTNVGKSTFINRII 183
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
++ K + +T + PGTTL ++ I L A LYDTPG+++ H M+ ++ + K++
Sbjct: 184 EEATGKGNVITTSYFPGTTLDMIEIP--LEGGATLYDTPGIINHHQMAHFVDARDLKIIT 241
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
++E+ PR Y++ GQ + GGL RLD + + + + +++H K+E AD ++
Sbjct: 242 PKREIHPRVYQLNEGQTLFFGGLARLDYIKGGRRSF--VCYMANELTVHRTKLEKADSLY 299
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
N +G L PP + A+E R L V DI +GLGW + G A L
Sbjct: 300 ANQLGDLLSPP-NKRYAAEFPPLVPRSLSVKERK-----TDIVFSGLGWVTCNDLG-AQL 352
Query: 600 TLWTYDGIEITLREPLV 616
+ G+++ +R+ L+
Sbjct: 353 VVHAPKGVDVFIRQSLI 369
>gi|157693068|ref|YP_001487530.1| GTP-binding protein YqeH [Bacillus pumilus SAFR-032]
gi|157681826|gb|ABV62970.1| GTP-binding protein [Bacillus pumilus SAFR-032]
Length = 366
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 190/374 (50%), Gaps = 40/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + + DF ++ G ++ ++V VVD DF
Sbjct: 32 EDVICQRCFRLKNY----NEIQDVSLTEDDF-----LNILHSIGETDS-LIVKVVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + ++ + ++LVG KVD+LP V RL W++ AK
Sbjct: 82 NGSWINGLSRIVGGN---------------PILLVGNKVDILPKSVKKDRLVHWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V+L+SA + GV ++ I R NV+V+G N GKST IN K+
Sbjct: 127 ENGLNPI-AVFLISASRGQGVPEVMEAIDHYREGR-NVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L + L+DTPG+++ H M+ +++++ K++ +KE
Sbjct: 185 GEENVITTSQYPGTTLDAIEIP--LDDGSALFDTPGIINRHQMAHYVSKNDLKILTPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPN-VSLHLGKIENADEIWKNH 542
L+PRT+++ Q ++ GGL R D + + V PN +++H K+ENAD++++ H
Sbjct: 243 LKPRTFQLNEAQTLYFGGLARFDYVKGGRTSF---VCYMPNELNIHRTKLENADDLYEKH 299
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP S+ G L ++D +DI +GLGW + G+ + ++
Sbjct: 300 AGELLSPP------SKEGMEDFPPLVPHTFTFDQPKMDIVFSGLGWITANDAGK-QIKVY 352
Query: 603 TYDGIEITLREPLV 616
G+ + +R L+
Sbjct: 353 APKGVHVFMRRSLI 366
>gi|191638679|ref|YP_001987845.1| GTP-binding protein YqeH [Lactobacillus casei BL23]
gi|190712981|emb|CAQ66987.1| Predicted GTPase [Lactobacillus casei BL23]
Length = 356
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 186/385 (48%), Gaps = 44/385 (11%)
Query: 234 KAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGV 293
KA ++ + + C RC LR+Y NE+A + D DF RL+ G +NA +
Sbjct: 14 KATLSKADPDDEIYCQRCFRLRHY----NEIAPVTLTDDDF-----LRLLNAIGESNA-L 63
Query: 294 VVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTR 353
+V V+D DF+G S+ L D + +LVG K D+LP ++P R
Sbjct: 64 IVNVIDIFDFNG--------SVIPGLHRFVGDNPV-------ILVGNKADVLPKSLNPNR 108
Query: 354 LDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
L W++ +AKA G + L SA+K GV LL I++ R +V+V+G N GKST
Sbjct: 109 LKNWLQQQAKAQGLRPV-ATMLASAKKGFGVDELLDAIEKYRDHR-DVYVVGVTNTGKST 166
Query: 414 LINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
LIN K+ +T + PGTTL RI L L DTPG++H H M+ +
Sbjct: 167 LINRIIKELTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRHQMAHFVGPK 224
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIE 533
+ K+V ++P TY++ GQ + +GGL R D + + ++ ++LH K+E
Sbjct: 225 DLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRNSF--VIYTDNQLTLHRTKLE 282
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGL 593
NAD+ ++ HVG L PP D + + + D+ AGLGW ++
Sbjct: 283 NADDFYQKHVGGLLSPP-QPDEVPDFPPLVRFEFTPKEKA------DLVFAGLGWITV-- 333
Query: 594 KGEASLTLWTY--DGIEITLREPLV 616
A +T+ Y G+++ LR +
Sbjct: 334 --PAGVTVAGYAPKGVDVLLRRAFI 356
>gi|311069170|ref|YP_003974093.1| GTP-binding protein YqeH [Bacillus atrophaeus 1942]
gi|419820180|ref|ZP_14343793.1| GTPase YqeH [Bacillus atrophaeus C89]
gi|310869687|gb|ADP33162.1| GTP-binding protein YqeH [Bacillus atrophaeus 1942]
gi|388475692|gb|EIM12402.1| GTPase YqeH [Bacillus atrophaeus C89]
Length = 366
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 188/374 (50%), Gaps = 40/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ G ++ ++V +VD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDF-----LNILHGIGETDS-LIVKIVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L +L P ++LVG K D+LP + RL +W++ AK
Sbjct: 82 NG--------SWINGLN------RLVGGNP-ILLVGNKADILPKSLKRERLIQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G L+ V+LVSA + G++ ++ I+ R +V+V+G N GKST IN K+
Sbjct: 127 EYGLKPLD-VFLVSASRGQGIKEVIDAIEHYRQGR-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L + LYDTPG+++ H M+ +N+ + K++ +KE
Sbjct: 185 GEENIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINRHQMAHYVNKRDLKVLTPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPN-VSLHLGKIENADEIWKNH 542
L+PRT+++ Q ++ GGL R D + V PN + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNDQQTLYFGGLARFDYVSGARSAF---VCYMPNDLLIHRTKLENADALYEKH 299
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP G+D E + DI +GLGW ++ + E +T +
Sbjct: 300 AGELLTPP-GKDDMDEFPELTAHTFTIKEPK-----TDIVFSGLGWVTVQ-EAEKKITAY 352
Query: 603 TYDGIEITLREPLV 616
G+ + +R L+
Sbjct: 353 APKGVHVFVRRSLI 366
>gi|450061597|ref|ZP_21843908.1| GTP-binding protein YqeH [Streptococcus mutans NLML5]
gi|449207028|gb|EMC07711.1| GTP-binding protein YqeH [Streptococcus mutans NLML5]
Length = 368
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 190/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAYYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 ARADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|379723335|ref|YP_005315466.1| hypothetical protein PM3016_5625 [Paenibacillus mucilaginosus 3016]
gi|378572007|gb|AFC32317.1| YqeH [Paenibacillus mucilaginosus 3016]
Length = 368
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 192/372 (51%), Gaps = 38/372 (10%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
+C RC+ ++NY NE + + DF +L+ G ++ +VV +VD DF+G
Sbjct: 34 VICQRCYRIKNY----NEASGITLNQDDF-----LKLLGHVGTTDS-LVVNIVDLFDFEG 83
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
S+ L + + +LV K+DLLP + R+ WV+ +AK
Sbjct: 84 --------SMISGLPRFVGNNPI-------ILVVNKIDLLPKVTNYNRILNWVQRQAKEA 128
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G K+ + L SARK++G ++ + E R +++V+GA N GKSTLIN
Sbjct: 129 GL-KVANIVLCSARKNMGFERVIEALDEHRKGR-DIYVVGATNVGKSTLINRLIHDYSDL 186
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
++LT + PGTTL ++RI L + DTPG+++ H ++ +N+ + V K ++
Sbjct: 187 DAELTVSQYPGTTLDLVRIP--LDDGGSIIDTPGIVYKHRLTELVNKKDLMKVMPDKPMK 244
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P +++ GQ+V+ G L R D Q ++ T + S ++ H K+E ADE+++NH G+
Sbjct: 245 PLVFQLNSGQSVYFGALARFDFLQGERQSF--TFYVSNSLEAHRTKLEKADELYENHKGV 302
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL-GLKGEASLTLWTY 604
LQPP+ ++ EL +++ +D++ +GLGW G++G A L +
Sbjct: 303 LLQPPVLEN-LDELPKLTKHAIRIPKGG----NLDVSISGLGWVKANGVQG-AELAIHVP 356
Query: 605 DGIEITLREPLV 616
G+++ +RE L+
Sbjct: 357 RGVKVAVRESLI 368
>gi|358464171|ref|ZP_09174137.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 058
str. F0407]
gi|357067199|gb|EHI77325.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 058
str. F0407]
Length = 368
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 190/391 (48%), Gaps = 55/391 (14%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV V+D DF+G + P + D ++LVG K D+LP V P
Sbjct: 75 LVVNVIDIFDFNGSVIPG------LSRFVSGND----------VLLVGNKKDILPKSVKP 118
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G N GK
Sbjct: 119 GKISQWLVERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGK 176
Query: 412 STLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
STLIN ++ + +T + PGTTL + I L A +YDTPG++H H M+ L
Sbjct: 177 STLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGAYIYDTPGIIHRHQMAHYLT 234
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
K V +KE++P+TY++ Q + +GGL R D S E T + + LH K
Sbjct: 235 AKNLKYVSPKKEIKPKTYQLNSEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELKLHRTK 292
Query: 532 IENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGIDIAAAG 585
+E A + H+GI L PP +++ + T KD+ D+ +G
Sbjct: 293 LEGASAFYDKHLGILLTPPNSKEKEDFPKLVQHVFTIKDKT-------------DLVISG 339
Query: 586 LGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
LGW + + G A + +W +G+ + R+ ++
Sbjct: 340 LGW--IRVTGTAKVAVWVPEGVAVVTRKAII 368
>gi|262282075|ref|ZP_06059844.1| GTP-binding protein YqeH [Streptococcus sp. 2_1_36FAA]
gi|262262529|gb|EEY81226.1| GTP-binding protein YqeH [Streptococcus sp. 2_1_36FAA]
Length = 368
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDSKVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K V +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K++ A E + HVG L PP+G+++ E + + + DI +GLGW
Sbjct: 290 RTKLQGASEFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 343 IR--VSGPARVAGWAPEGVAVVTRKAII 368
>gi|449897616|ref|ZP_21790107.1| GTP-binding protein YqeH [Streptococcus mutans R221]
gi|449261150|gb|EMC58634.1| GTP-binding protein YqeH [Streptococcus mutans R221]
Length = 368
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 191/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGNKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|398307026|ref|ZP_10510612.1| GTPase YqeH [Bacillus vallismortis DV1-F-3]
Length = 366
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 189/380 (49%), Gaps = 52/380 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ G ++ +VV +VD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDF-----LNILHGIGETDS-LVVKIVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L+ +L P L LVG K D+LP + RL +W++ AK
Sbjct: 82 NG--------SWINGLQ------RLVGGNPVL-LVGNKADILPKSLKRERLIQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+LVSA + G+R ++ I+ + +V+V+G N GKST IN K+
Sbjct: 127 ELGLKPVD-VFLVSAGRGQGIREVIDAIEHYRNDK-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL + I L + LYDTPG+++ H M+ +N+ + K++ +KE
Sbjct: 185 GEEDIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVNKKDLKILSPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S E + + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNDQQTLYFGGLARFDY--VSGERAPFICYMPNELMIHRTKLENADALYEKHA 300
Query: 544 GIRLQPPIGQDRASELG-------TWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
G L PP G+D E T KD+K DI +GLGW ++ +
Sbjct: 301 GELLTPP-GKDEMGEFPELVAHTFTIKDKK------------TDIVFSGLGWVTVH-DAD 346
Query: 597 ASLTLWTYDGIEITLREPLV 616
+T + G+ + +R L+
Sbjct: 347 KKVTAYAPKGVHVFVRRSLI 366
>gi|321312052|ref|YP_004204339.1| GTPase YqeH [Bacillus subtilis BSn5]
gi|320018326|gb|ADV93312.1| GTPase YqeH [Bacillus subtilis BSn5]
Length = 366
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 190/380 (50%), Gaps = 52/380 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ G ++ +VV +VD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDF-----LNILHGIGETDS-LVVKIVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L+ +L P ++LVG K D+LP + RL +W++ AK
Sbjct: 82 NG--------SWINGLQ------RLVGGNP-ILLVGNKADILPKSLKRERLIQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+LVSA + G+R ++ I+ + +V+V+G N GKST IN K+
Sbjct: 127 ELGLKPVD-VFLVSAGRGQGIREVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL + I L + LYDTPG+++ H M+ +N+ + K++ +KE
Sbjct: 185 GEEDIITTSQFPGTTLDAIEIP--LDDGSSLYDTPGIINNHQMAHYVNKKDLKILSPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S E + + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNDQQTLYFGGLARFDY--VSGERSPFICYMPNELMIHRTKLENADALYEKHA 300
Query: 544 GIRLQPPIGQDRASELG-------TWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
G L PP G+D E T KD+K DI +GLGW ++ +
Sbjct: 301 GELLTPP-GKDEMDEFPELVAHTFTIKDKK------------TDIVFSGLGWVTVH-DAD 346
Query: 597 ASLTLWTYDGIEITLREPLV 616
+T + G+ + +R L+
Sbjct: 347 KKVTAYAPKGVHVFIRRSLI 366
>gi|77411900|ref|ZP_00788232.1| GTP-binding protein [Streptococcus agalactiae CJB111]
gi|77162060|gb|EAO73039.1| GTP-binding protein [Streptococcus agalactiae CJB111]
Length = 372
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 193/386 (50%), Gaps = 41/386 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + I D +F +L+ G+++A
Sbjct: 26 RAALEKGLETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G ++ + A +D ++LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNGSIIPGLSRFV------AGND---------VLLVGNKKDILPKSVKDG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G N GKS
Sbjct: 120 KVTQWLTERAHEEGLRPVD-VILTSAQNHHAIKDLIDTIEKYRHGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L + ++DTPG++H H M+ L
Sbjct: 178 TLINAIIREITGSRDVITTSRFPGTTLDKIEIP--LDDGSYIFDTPGIIHRHQMAHYLTA 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K V +KE++P+TY++ Q + + GL R D + T + N++LH K+
Sbjct: 236 KNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGF--TAYFDNNLNLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
ADE + HVG L PP G++ S+ + + + +DI +GLGW +
Sbjct: 294 VGADEFYTKHVGKLLTPPTGKE-VSDFPKLVRHEFTIK------DKMDIVYSGLGWIRVK 346
Query: 593 LKGE--ASLTLWTYDGIEITLREPLV 616
+ E + +W +G+ + LR+ L+
Sbjct: 347 SEAENPVVVAVWAPEGVAVVLRKALI 372
>gi|450044471|ref|ZP_21837871.1| GTP-binding protein YqeH [Streptococcus mutans N34]
gi|449201640|gb|EMC02626.1| GTP-binding protein YqeH [Streptococcus mutans N34]
Length = 368
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 189/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSV 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIDELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 ARADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKSLI 368
>gi|449961116|ref|ZP_21810793.1| GTP-binding protein YqeH [Streptococcus mutans 4VF1]
gi|449166974|gb|EMB69883.1| GTP-binding protein YqeH [Streptococcus mutans 4VF1]
Length = 368
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 190/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 ARADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|409387283|ref|ZP_11239523.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactococcus raffinolactis 4877]
gi|399205590|emb|CCK20438.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactococcus raffinolactis 4877]
Length = 378
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 193/391 (49%), Gaps = 55/391 (14%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GE+ C RC LR+Y NE+A I D +F RL+ GN NA
Sbjct: 36 KSALEKGLETGEL-YCQRCFRLRHY----NEIAAVNISDDEF-----LRLLTEVGNTNA- 84
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEE--AKDDAKLSKKLPKLVLVGTKVDLLPSQVS 350
+VV VVD DF+G S+ L A +D ++LVG K D+LP V
Sbjct: 85 LVVNVVDIFDFNG--------SVIPGLHRFVAGND---------VLLVGNKRDILPKSVK 127
Query: 351 PTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRG--NVWVIGAQN 408
+++ W+R RA G ++ V + +D + L + E+ R +V+V+G N
Sbjct: 128 ESKVRNWLRERAHEEGLRPVDVVLTSAYNRD----DTLDLVDEIENYREGRDVYVVGVTN 183
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN K +T + PGTTL + I L + + DTPG++H H M+
Sbjct: 184 VGKSTLINAIIKNATGDSDVITTSRFPGTTLDKIEIP--LDDGSFIIDTPGIIHRHQMAH 241
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
+ ++ K+V +KE++P+TY++ GQ + +GGL R D + + T + ++ +H
Sbjct: 242 FIGPEDLKLVSPKKEIKPKTYQLNEGQTLFMGGLARFDYLKGDKQGF--TGFFDNHLMIH 299
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKD---RKLKVSGTSWDVNGIDIAAAG 585
K+E ADE + H G L PP R +++ T+ ++ + G S DI +G
Sbjct: 300 RTKLEKADEFYVKHKGSLLVPP----READMATFPKLVRKEFTIKGKS------DIVFSG 349
Query: 586 LGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
LGW + A + W +G+++ +R+ L+
Sbjct: 350 LGWIRVA--KPAIIAAWVPEGVDVVIRKSLI 378
>gi|422871490|ref|ZP_16917983.1| GTP-binding protein [Streptococcus sanguinis SK1087]
gi|328945658|gb|EGG39809.1| GTP-binding protein [Streptococcus sanguinis SK1087]
Length = 368
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLEAGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDSFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ RW+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDSKVTRWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K + +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K++ A + + HVG L PP+G+++ E + + + DI +GLGW
Sbjct: 290 RTKLQGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 343 IR--VSGPARVAGWAPEGVAVVTRKAII 368
>gi|384160215|ref|YP_005542288.1| GTPase YqeH [Bacillus amyloliquefaciens TA208]
gi|384165144|ref|YP_005546523.1| ribosome 30S assembly GTPase [Bacillus amyloliquefaciens LL3]
gi|384169285|ref|YP_005550663.1| GTP-binding protein [Bacillus amyloliquefaciens XH7]
gi|328554303|gb|AEB24795.1| GTPase YqeH [Bacillus amyloliquefaciens TA208]
gi|328912699|gb|AEB64295.1| GTPase involved in ribosome 30S assembly [Bacillus
amyloliquefaciens LL3]
gi|341828564|gb|AEK89815.1| GTP-binding protein [Bacillus amyloliquefaciens XH7]
Length = 366
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 188/374 (50%), Gaps = 40/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ T G+ ++ ++V VVD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDFLNILHT-----IGDTDS-LIVKVVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + ++LVG K D+LP V RL +W++ AK
Sbjct: 82 NGSWINGLNRFVGGN---------------PIILVGNKADILPKSVKRERLVQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G L+ V+L+SA + G++ ++ I+ R +V+V+G N GKST IN K+
Sbjct: 127 EYGLKPLD-VFLISASRGQGMKEVIDAIEHYREGR-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L + LYDTPG+++ H M+ +++ + K++ +KE
Sbjct: 185 GEENIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVDKRDLKVLTPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPN-VSLHLGKIENADEIWKNH 542
L+PRT+++ Q ++ GGL R D V PN + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNEKQTLYFGGLARFDYVSGDKSAF---VCYMPNELMIHRTKLENADALYEKH 299
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP G+D E +L + DI +GLGW ++ + +T +
Sbjct: 300 AGELLTPP-GKDHLDEF-----PELTAHTFTIKEGKTDIVFSGLGWVTVQ-NADKKITAY 352
Query: 603 TYDGIEITLREPLV 616
G+ + +R L+
Sbjct: 353 APKGVHVFVRRSLI 366
>gi|387785525|ref|YP_006250621.1| putative GTP-binding protein [Streptococcus mutans LJ23]
gi|450169919|ref|ZP_21883266.1| GTP-binding protein YqeH [Streptococcus mutans SM4]
gi|379131926|dbj|BAL68678.1| putative GTP-binding protein [Streptococcus mutans LJ23]
gi|449246500|gb|EMC44803.1| GTP-binding protein YqeH [Streptococcus mutans SM4]
Length = 368
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 190/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDQQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|422849255|ref|ZP_16895931.1| GTP-binding protein [Streptococcus sanguinis SK115]
gi|422877039|ref|ZP_16923509.1| GTP-binding protein [Streptococcus sanguinis SK1056]
gi|325690276|gb|EGD32280.1| GTP-binding protein [Streptococcus sanguinis SK115]
gi|332360512|gb|EGJ38322.1| GTP-binding protein [Streptococcus sanguinis SK1056]
Length = 368
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 191/388 (49%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ RW+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDSKVTRWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K + +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K++ A + + HVG L PP+G+++ E + + + DI +GLGW
Sbjct: 290 RTKLQGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ + G A + W +G+ + R+ ++
Sbjct: 343 --IRVSGPARVAGWAPEGVAVVTRKAII 368
>gi|450006352|ref|ZP_21827181.1| GTP-binding protein YqeH [Streptococcus mutans NMT4863]
gi|449187647|gb|EMB89415.1| GTP-binding protein YqeH [Streptococcus mutans NMT4863]
Length = 368
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 190/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDQQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADTFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|387784745|ref|YP_006070828.1| putative GTP binding protein [Streptococcus salivarius JIM8777]
gi|338745627|emb|CCB95993.1| putative GTP binding protein [Streptococcus salivarius JIM8777]
Length = 372
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 196/401 (48%), Gaps = 47/401 (11%)
Query: 219 ERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVI 278
E +K + A KKA E GE+ C RC LR+Y NE+ + I D +F
Sbjct: 16 EDKEKAGYTPASSIKKAEET----GEL-YCQRCFRLRHY----NEIVDVHITDDEF---- 62
Query: 279 ATRLMKPSGNANAGVVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVL 337
+L+ G+++A +VV VVD DF+G + P + D ++L
Sbjct: 63 -LKLLHEVGDSDA-LVVNVVDIFDFNGSIIPG------LSRFVSGND----------VLL 104
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
VG K D+LP V ++ +W+ RA G ++ V L SA+ ++ L+ I++L
Sbjct: 105 VGNKKDILPKSVKDGKVTQWLTERAHEEGMRPVD-VMLTSAQNHHAIKELIQRIEKLRKG 163
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
R +V+V+G N GKSTLIN K+ +T + PGTTL + I L ++DT
Sbjct: 164 R-DVYVVGVTNVGKSTLINAIIKEITGDKDIITTSRFPGTTLDKIEIP--LDDGTYIFDT 220
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PG++H H M+ L+ + K V +KE++P+TY++ GQ + +GGL R D + +
Sbjct: 221 PGIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQTLFLGGLGRFDFIDGNKQGF-- 278
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
T + N+ LH K+E AD + HVG L PP +D A + + V +
Sbjct: 279 TAFFDNNLKLHRTKLEGADAFYDKHVGSLLVPPGPKDLA-DFPKLVRHEFTVKDKT---- 333
Query: 578 GIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
DI +GLGW + K E + W +G+ + +R+ ++
Sbjct: 334 --DIVFSGLGWIRVQGKAEQPTIVAAWAPEGVGVVVRKAII 372
>gi|421766272|ref|ZP_16203047.1| GTP-binding protein YqeH [Lactococcus garvieae DCC43]
gi|407625279|gb|EKF51990.1| GTP-binding protein YqeH [Lactococcus garvieae DCC43]
Length = 375
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 190/379 (50%), Gaps = 40/379 (10%)
Query: 238 AQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMV 297
A++ + + C RC LR+Y NE+A+ + D DF RL+ G +A ++V V
Sbjct: 37 AKRGEDDALYCQRCFRLRHY----NEIADVSLTDDDF-----LRLLSEIGEHDA-LIVNV 86
Query: 298 VDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
VD DF+G SL L + L +LV K D+LP + ++ W
Sbjct: 87 VDIFDFNG--------SLIPSLHRFTGNNDL-------LLVANKKDILPHSLKVGKMTAW 131
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
++ +AK G L+ V + SA+ VR L+ I+ R +V+V+G N GKSTLIN
Sbjct: 132 LKEQAKKAGLRPLD-VLVTSAKNQEDVRELMEKIERRRKGR-DVYVVGVTNVGKSTLINA 189
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
K + +T + PGTTL + I L + L DTPG++H M+ L + K+
Sbjct: 190 IIKLVTGDDNVITTSRFPGTTLDKIEIP--LDDDSLLIDTPGIIHRGQMAHYLEAKDLKL 247
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
V +KE++P+TY++ GQ + +GGL R D + + + TV+ +++H K++ A E
Sbjct: 248 VSPKKEIKPKTYQLNAGQTLFLGGLARFDYIKGEKQGL--TVFCDNELNIHRTKLDGATE 305
Query: 538 IWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEA 597
++ HVG L PP +D A+ ++ V S DI +GLGW + +G
Sbjct: 306 FYEKHVGSLLVPPGAKDLAA-FPKLIRKEFSVKEKS------DIVFSGLGWIRVAERG-- 356
Query: 598 SLTLWTYDGIEITLREPLV 616
+ W +G+++ LR+ LV
Sbjct: 357 VVAAWVPEGVDVVLRKALV 375
>gi|389571867|ref|ZP_10161955.1| ribosome biogenesis GTPase YqeH [Bacillus sp. M 2-6]
gi|388428353|gb|EIL86150.1| ribosome biogenesis GTPase YqeH [Bacillus sp. M 2-6]
Length = 366
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 190/374 (50%), Gaps = 40/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + + DF ++ G ++ ++V VVD DF
Sbjct: 32 EDVICQRCFRLKNY----NEIQDVSLTEDDF-----LNILHSIGETDS-LIVKVVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + ++ + ++LVG KVD+LP V RL +W++ AK
Sbjct: 82 NGSWINGLSRIVGGN---------------PILLVGNKVDILPKSVKKDRLVQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+L+SA + GV ++ I R NV+V+G N GKST IN K+
Sbjct: 127 ENGLNPID-VFLISASRGQGVPEVMEAIDHYREGR-NVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L + L+DTPG+++ H M+ + +++ K++ +KE
Sbjct: 185 GEENVITTSQYPGTTLDAIEIP--LDDGSALFDTPGIINRHQMAHYVGKNDLKILTPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPN-VSLHLGKIENADEIWKNH 542
L+PRT+++ Q ++ GGL R D + + V PN +++H K+ENADE+++ H
Sbjct: 243 LKPRTFQLNEAQTLYFGGLARFDYVKGGRTSF---VCYMPNELNIHRTKLENADELYEKH 299
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP S+ G L + D +DI +GLGW + G+ + ++
Sbjct: 300 AGELLSPP------SKEGMEDFPPLVPHTFTIDQPKMDIVFSGLGWVTANDAGK-QIKVY 352
Query: 603 TYDGIEITLREPLV 616
G+ + +R L+
Sbjct: 353 APKGVHVFMRRSLI 366
>gi|337748425|ref|YP_004642587.1| hypothetical protein KNP414_04185 [Paenibacillus mucilaginosus
KNP414]
gi|336299614|gb|AEI42717.1| YqeH [Paenibacillus mucilaginosus KNP414]
Length = 368
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 192/372 (51%), Gaps = 38/372 (10%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
+C RC+ ++NY NE + + DF +L+ G ++ +VV +VD DF+G
Sbjct: 34 VICQRCYRIKNY----NEASGITLNQDDF-----LKLLGHVGTTDS-LVVNIVDLFDFEG 83
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
S+ L + + +LV K+DLLP + R+ WV+ +AK
Sbjct: 84 --------SMISGLPRFVGNNPI-------ILVVNKIDLLPKVTNYNRILNWVQRQAKEA 128
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G K+ + L SARK++G ++ + E R +++V+GA N GKSTLIN
Sbjct: 129 GL-KVADIVLCSARKNMGFERVIEALDEHRKGR-DIYVVGATNVGKSTLINRLIHDYSDL 186
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
++LT + PGTTL ++RI L + DTPG+++ H ++ +N+ + V K ++
Sbjct: 187 DAELTVSQYPGTTLDLVRIP--LDDGGSIIDTPGIVYKHRLTELVNKKDLMKVMPDKPMK 244
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P +++ GQ+V+ G L R D Q ++ T + S ++ H K+E ADE+++NH G+
Sbjct: 245 PLVFQLNSGQSVYFGALARFDFLQGERQSF--TFYVSNSLEAHRTKLEKADELYENHKGV 302
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL-GLKGEASLTLWTY 604
LQPP+ ++ EL +++ +D++ +GLGW G++G A L +
Sbjct: 303 LLQPPVLEN-LDELPKLTKHAIRIPKGG----NLDVSISGLGWVKANGVQG-AELAIHVP 356
Query: 605 DGIEITLREPLV 616
G+++ +RE L+
Sbjct: 357 RGVKVAVRESLI 368
>gi|15643611|ref|NP_228657.1| hypothetical protein TM0848 [Thermotoga maritima MSB8]
gi|403252589|ref|ZP_10918898.1| hypothetical protein EMP_02399 [Thermotoga sp. EMP]
gi|418044982|ref|ZP_12683078.1| ribosome biogenesis GTPase YqeH [Thermotoga maritima MSB8]
gi|4981381|gb|AAD35930.1|AE001751_10 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351678064|gb|EHA61211.1| ribosome biogenesis GTPase YqeH [Thermotoga maritima MSB8]
gi|402812079|gb|EJX26559.1| hypothetical protein EMP_02399 [Thermotoga sp. EMP]
Length = 363
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 187/380 (49%), Gaps = 47/380 (12%)
Query: 237 EAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVM 296
E + E+G+ +C RC +++YG++ E + D+DF + + L VVV
Sbjct: 27 EKRLEEGKEILCQRCFRMKHYGKL-----EPVEFDWDFKNQLKSYL------GGFDVVVW 75
Query: 297 VVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR 356
V+D DF+G + + A+ L K +++ V K+DLLP V+ +
Sbjct: 76 VIDIFDFEGTYREDIAEIL---------------KGKRVIYVINKIDLLPRAVTVKEIKE 120
Query: 357 WVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN 416
WV+ R K + + +VSA K+ G+ +L+ ++ L V+G N GKS+L+N
Sbjct: 121 WVKKRIKTKNT---DDIRIVSAEKNFGLTSLVKYLSRLTD---KALVVGVTNVGKSSLLN 174
Query: 417 TFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQK 476
E T +P PGTTLGIL+ + A LYDTPG++ + L+ + QK
Sbjct: 175 KICTHEN------TISPFPGTTLGILK-RKVKEANLYLYDTPGIMTSDRILDLLDPECQK 227
Query: 477 MVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENAD 536
V R+EL +T++ G+ + +GGL R D+ + + +++S V+ H + E AD
Sbjct: 228 RVLPREELSRKTFKPDNGRTIFMGGLCRFDIHFETEKNPIFLLFSSKEVTFHETRRERAD 287
Query: 537 EIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
E+ +N +G L PP + + WK + G ++A AGLGW S+ +G
Sbjct: 288 ELMRNRLGDLLIPPCSKTKFENF-KWKRETFTLK------EGEELAVAGLGWMSVR-RGP 339
Query: 597 ASLTLWTYDGIEITLREPLV 616
++ + D +++ +RE LV
Sbjct: 340 FTVEVTVPDSVKLVVREALV 359
>gi|422859067|ref|ZP_16905717.1| GTP-binding protein [Streptococcus sanguinis SK1057]
gi|327458847|gb|EGF05195.1| GTP-binding protein [Streptococcus sanguinis SK1057]
Length = 368
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDSKMTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K + +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+E A + + HVG L PP+G+++ E + + + DI +GLGW
Sbjct: 290 RTKLEGASDFYDKHVGGLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ I R+ ++
Sbjct: 343 IR--VSGPARVAGWAPEGVAIVTRKAII 368
>gi|449982204|ref|ZP_21818184.1| GTP-binding protein YqeH [Streptococcus mutans 5SM3]
gi|450036899|ref|ZP_21835667.1| GTP-binding protein YqeH [Streptococcus mutans M21]
gi|450107703|ref|ZP_21861140.1| GTP-binding protein YqeH [Streptococcus mutans SF14]
gi|450110540|ref|ZP_21862154.1| GTP-binding protein YqeH [Streptococcus mutans SM6]
gi|450160189|ref|ZP_21879859.1| GTP-binding protein YqeH [Streptococcus mutans 66-2A]
gi|449175079|gb|EMB77524.1| GTP-binding protein YqeH [Streptococcus mutans 5SM3]
gi|449193095|gb|EMB94490.1| GTP-binding protein YqeH [Streptococcus mutans M21]
gi|449221545|gb|EMC21314.1| GTP-binding protein YqeH [Streptococcus mutans SF14]
gi|449225021|gb|EMC24640.1| GTP-binding protein YqeH [Streptococcus mutans SM6]
gi|449240379|gb|EMC39058.1| GTP-binding protein YqeH [Streptococcus mutans 66-2A]
Length = 368
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 190/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|421894614|ref|ZP_16325101.1| ribosome biogenesis GTPase YqeH [Pediococcus pentosaceus IE-3]
gi|385272529|emb|CCG90473.1| ribosome biogenesis GTPase YqeH [Pediococcus pentosaceus IE-3]
Length = 370
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 187/378 (49%), Gaps = 46/378 (12%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E G++ C RC LR+Y NE+A I D DF +L+ ++N+ +VV VVD
Sbjct: 37 ESGQL-YCQRCFRLRHY----NEIAPVDISDDDF-----RKLLSQISDSNS-LVVYVVDM 85
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G SL L D + +LVG K D+ P + R+ W+R
Sbjct: 86 FDFNG--------SLIPGLHRFIGDNPV-------LLVGNKEDVFPKSIKRHRMKEWLRQ 130
Query: 361 RAKAGGA-PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
+AKA G P+ V + SA+ V L +++L R +V+V+G N GKSTLIN+
Sbjct: 131 QAKANGILPE--DVVITSAKNASSVEALFNAVEKLRKGR-DVYVVGVTNVGKSTLINSLI 187
Query: 419 AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMV 478
A + G+K +T + PGTTL RI + L DTPG++H M+ L ++ K V
Sbjct: 188 AIRNGIK-DVITTSRFPGTTLD--RIEIPFDDHSNLIDTPGIIHADQMAHVLAAEDLKYV 244
Query: 479 EIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEI 538
+K ++PR +++ Q + +G L R D + + VT + N+ +H K+ENAD
Sbjct: 245 SPQKTIKPRVFQLNSQQTLFLGALARFDYEHSEGS---VTAYFDNNLMVHRTKLENADNF 301
Query: 539 WKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEAS 598
++ H G L PP + A K KL S D + DI GLGW S + ++
Sbjct: 302 YEKHAGELLTPPTADNLA------KMPKLVAHQFSADQDS-DIVFEGLGWIS--VPEGST 352
Query: 599 LTLWTYDGIEITLREPLV 616
+T W +GI + +R L+
Sbjct: 353 ITAWAPEGISVVIRRSLI 370
>gi|450072630|ref|ZP_21848694.1| GTP-binding protein YqeH [Streptococcus mutans M2A]
gi|449210944|gb|EMC11369.1| GTP-binding protein YqeH [Streptococcus mutans M2A]
Length = 368
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 189/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 FVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKTDILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKSLI 368
>gi|409997539|ref|YP_006751940.1| hypothetical protein BN194_18740 [Lactobacillus casei W56]
gi|406358551|emb|CCK22821.1| Uncharacterized protein yqeH [Lactobacillus casei W56]
Length = 409
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 186/385 (48%), Gaps = 44/385 (11%)
Query: 234 KAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGV 293
KA ++ + + C RC LR+Y NE+A + D DF RL+ G +NA +
Sbjct: 67 KATLSKADPDDEIYCQRCFRLRHY----NEIAPVTLTDDDF-----LRLLNAIGESNA-L 116
Query: 294 VVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTR 353
+V V+D DF+G S+ L D + +LVG K D+LP ++P R
Sbjct: 117 IVNVIDIFDFNG--------SVIPGLHRFVGDNPV-------ILVGNKADVLPKSLNPNR 161
Query: 354 LDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
L W++ +AKA G + L SA+K GV LL I++ R +V+V+G N GKST
Sbjct: 162 LKNWLQQQAKAQGLRPV-ATMLASAKKGFGVDELLDAIEKYRDHR-DVYVVGVTNTGKST 219
Query: 414 LINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
LIN K+ +T + PGTTL RI L L DTPG++H H M+ +
Sbjct: 220 LINRIIKELTGVEDLITTSRFPGTTLD--RIMIPLDDGQSLIDTPGIIHRHQMAHFVGPK 277
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIE 533
+ K+V ++P TY++ GQ + +GGL R D + + ++ ++LH K+E
Sbjct: 278 DLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRNSF--VIYTDNQLTLHRTKLE 335
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGL 593
NAD+ ++ HVG L PP D + + + D+ AGLGW ++
Sbjct: 336 NADDFYQKHVGGLLSPP-QPDEVPDFPPLVRFEFTPKEKA------DLVFAGLGWITV-- 386
Query: 594 KGEASLTLWTY--DGIEITLREPLV 616
A +T+ Y G+++ LR +
Sbjct: 387 --PAGVTVAGYAPKGVDVLLRRAFI 409
>gi|284801878|ref|YP_003413743.1| GTP-binding protein YqeH [Listeria monocytogenes 08-5578]
gi|284995020|ref|YP_003416788.1| GTP-binding protein YqeH [Listeria monocytogenes 08-5923]
gi|284057440|gb|ADB68381.1| GTP-binding protein YqeH [Listeria monocytogenes 08-5578]
gi|284060487|gb|ADB71426.1| GTP-binding protein YqeH [Listeria monocytogenes 08-5923]
Length = 366
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 187/374 (50%), Gaps = 41/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
DG S L + + P L LVG K D+LP + +L RW+R RAK
Sbjct: 83 DG--------SWLPGLH------RFAGSNPVL-LVGNKEDVLPKSLKRDKLTRWMRTRAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V LVSA K G LL I EL + +V+V+G N GKSTLIN K+
Sbjct: 128 EQGLAATD-VVLVSAEKGHGFDTLLEKIDELRNGQ-DVYVVGCTNVGKSTLINRIIKQAS 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L L DTPG+++ H M+ ++ K + +KE
Sbjct: 186 GENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAITPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P +++ Q + +G L RLD +++ V+ S N+ +H K+E A+ +++
Sbjct: 244 VKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKAEALYEKQA 301
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSLGLKGEASLTLW 602
G+ LQPP +D + K+ S+ V DI +GLGW ++ +G A +T W
Sbjct: 302 GLVLQPPTEEDMKT--------LPKLVPYSFTVKEKADIVFSGLGWVTIP-EGGAKVTAW 352
Query: 603 TYDGIEITLREPLV 616
+G+ T+R LV
Sbjct: 353 VPEGVSATIRTSLV 366
>gi|16079621|ref|NP_390445.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
168]
gi|221310492|ref|ZP_03592339.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
168]
gi|221314816|ref|ZP_03596621.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319738|ref|ZP_03601032.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324016|ref|ZP_03605310.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
SMY]
gi|418032254|ref|ZP_12670737.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|428280060|ref|YP_005561795.1| GTP-binding protein YqeH [Bacillus subtilis subsp. natto BEST195]
gi|430756354|ref|YP_007208893.1| hypothetical protein A7A1_0862 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449095062|ref|YP_007427553.1| GTP-binding protein [Bacillus subtilis XF-1]
gi|452915399|ref|ZP_21964025.1| ribosome biogenesis GTPase YqeH [Bacillus subtilis MB73/2]
gi|1730981|sp|P54453.1|YQEH_BACSU RecName: Full=Uncharacterized protein YqeH
gi|1303788|dbj|BAA12444.1| YqeH [Bacillus subtilis]
gi|2635013|emb|CAB14509.1| GTPase involved in ribosome 30S assembly [Bacillus subtilis subsp.
subtilis str. 168]
gi|291485017|dbj|BAI86092.1| GTP-binding protein YqeH [Bacillus subtilis subsp. natto BEST195]
gi|351471117|gb|EHA31238.1| GTP-binding protein YqeH [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|407959815|dbj|BAM53055.1| GTP-binding protein YqeH [Bacillus subtilis BEST7613]
gi|407965390|dbj|BAM58629.1| GTP-binding protein YqeH [Bacillus subtilis BEST7003]
gi|430020874|gb|AGA21480.1| Hypothetical protein YqeH [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|449028977|gb|AGE64216.1| GTP-binding protein [Bacillus subtilis XF-1]
gi|452115747|gb|EME06143.1| ribosome biogenesis GTPase YqeH [Bacillus subtilis MB73/2]
Length = 366
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 190/380 (50%), Gaps = 52/380 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ G ++ +VV +VD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDF-----LNILHGIGETDS-LVVKIVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L+ +L P ++LVG K D+LP + RL +W++ AK
Sbjct: 82 NG--------SWINGLQ------RLVGGNP-ILLVGNKADILPKSLKRERLIQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+LVSA + G+R ++ I+ + +V+V+G N GKST IN K+
Sbjct: 127 ELGLKPVD-VFLVSAGRGQGIREVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL + I L + LYDTPG+++ H M+ +N+ + K++ +KE
Sbjct: 185 GEEDIITTSQFPGTTLDAIEIP--LDDGSSLYDTPGIINNHQMAHYVNKKDLKILSPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S E + + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNDQQTLYFGGLARFDY--VSGERSPFICYMPNELMIHRTKLENADALYEKHA 300
Query: 544 GIRLQPPIGQDRASELG-------TWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
G L PP G+D E T KD+K DI +GLGW ++ +
Sbjct: 301 GELLTPP-GKDEMDEFPELVAHTFTIKDKK------------TDIVFSGLGWVTVH-DAD 346
Query: 597 ASLTLWTYDGIEITLREPLV 616
+T + G+ + +R L+
Sbjct: 347 KKVTAYAPKGVHVFVRRSLI 366
>gi|450000106|ref|ZP_21824925.1| GTP-binding protein YqeH [Streptococcus mutans N29]
gi|449186162|gb|EMB88005.1| GTP-binding protein YqeH [Streptococcus mutans N29]
Length = 368
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 190/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQSFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADTFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|281411522|ref|YP_003345601.1| ribosome biogenesis GTPase YqeH [Thermotoga naphthophila RKU-10]
gi|281372625|gb|ADA66187.1| ribosome biogenesis GTPase YqeH [Thermotoga naphthophila RKU-10]
Length = 363
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 189/384 (49%), Gaps = 47/384 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
++ E + E+G+ +C RC +++YG++ E + ++DF + + L
Sbjct: 23 REVYERRLEEGKEILCQRCFRMKHYGKL-----EPVEFNWDFKNQLKSYL------GGFD 71
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
VVV V+D DF+G + + A+ L K +++ V K+DLLP V+
Sbjct: 72 VVVWVIDIFDFEGTYREDIAEIL---------------KGKRVIYVINKIDLLPRAVTVK 116
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+ WV+ R K + + +VSA K+ G+ +L+ ++ L V+G N GKS
Sbjct: 117 EIKEWVKKRIKTKNT---DDIRIVSAEKNFGLTSLVKYLSRLTD---KALVVGVTNVGKS 170
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
+L+N E T +P PGTTLGILR + A LYDTPG++ + L+
Sbjct: 171 SLLNKICTHEN------TISPFPGTTLGILR-RKVKEANLYLYDTPGIMTNDRILDLLDP 223
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ QK V R+EL +T++ G+ + +GGL R D+ + + +++S V+ H K
Sbjct: 224 ECQKRVLPREELSRKTFKPDNGRTIFMGGLCRFDIHFETEKNPIFLLFSSKEVTFHETKR 283
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
E ADE+ +N +G L PP + + WK + G ++A AGLGW S+
Sbjct: 284 ERADELMRNRLGDLLIPPCSKTKFENF-KWKRETFTLK------EGEELAVAGLGWMSVR 336
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+G ++ + D +++ +RE LV
Sbjct: 337 -RGPFTVEVTVPDSVKLVVREALV 359
>gi|418963084|ref|ZP_13514926.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383343950|gb|EID22121.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 368
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 188/390 (48%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + + D DF RL+ G++NA
Sbjct: 26 QSALEKGMETGEL-YCQRCFRLRHY----NEITDVQLTDDDF-----LRLLHEVGDSNA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV VVD DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNG---------------------SVIPGLPRFVAGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V +++ +W+ RA G ++ V L SA+ ++ L+ I++ R +V+V+G
Sbjct: 114 KSVKTSKVTQWLMERAHEEGLRPVD-VVLTSAQNKQAIKELIEKIEQYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDKEVITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L+ K + +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLSAKNLKYISPKKEIKPKTYQLNREQTLFLGGLGRFDFVSGDKQGF--TAYFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+ A E ++ HVG L PP + ++ +LK+ + D+ +GL
Sbjct: 288 LHRTKLAGAGEFYEKHVGSLLTPP-SKKEVADFPQLVKHELKIEAKT------DVVFSGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + W +G+ + R+ ++
Sbjct: 341 GW--IRVTGPAKIAAWVPEGVAVVTRKAII 368
>gi|290579863|ref|YP_003484255.1| GTP-binding protein [Streptococcus mutans NN2025]
gi|449971650|ref|ZP_21814481.1| GTP-binding protein YqeH [Streptococcus mutans 2VS1]
gi|450029763|ref|ZP_21832865.1| GTP-binding protein YqeH [Streptococcus mutans G123]
gi|450057387|ref|ZP_21842554.1| GTP-binding protein YqeH [Streptococcus mutans NLML4]
gi|450163520|ref|ZP_21880832.1| GTP-binding protein YqeH [Streptococcus mutans B]
gi|254996762|dbj|BAH87363.1| putative GTP-binding protein [Streptococcus mutans NN2025]
gi|449171756|gb|EMB74404.1| GTP-binding protein YqeH [Streptococcus mutans 2VS1]
gi|449193955|gb|EMB95324.1| GTP-binding protein YqeH [Streptococcus mutans G123]
gi|449205315|gb|EMC06067.1| GTP-binding protein YqeH [Streptococcus mutans NLML4]
gi|449242684|gb|EMC41244.1| GTP-binding protein YqeH [Streptococcus mutans B]
Length = 368
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 190/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADTFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|449976730|ref|ZP_21816343.1| GTP-binding protein YqeH [Streptococcus mutans 11VS1]
gi|449175269|gb|EMB77696.1| GTP-binding protein YqeH [Streptococcus mutans 11VS1]
Length = 368
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 191/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV V+D DF+G + P ++ + D L+LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNGSVIPG------LQRFISSND----------LLLVGNKADILPKSVKS 118
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GK
Sbjct: 119 GKITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGK 176
Query: 412 STLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
STLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 177 STLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLS 234
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K
Sbjct: 235 DKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTK 292
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 293 LAGADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--I 343
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 344 RINGRAKIAAWAPEGVAVVTRKALI 368
>gi|328957108|ref|YP_004374494.1| GTP-binding protein YqeH [Carnobacterium sp. 17-4]
gi|328673432|gb|AEB29478.1| GTP-binding protein YqeH [Carnobacterium sp. 17-4]
Length = 377
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 189/382 (49%), Gaps = 40/382 (10%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A E EKGEV C RC LR+Y NE+ + + D DF +L+ G+ +A ++
Sbjct: 36 ALEKGLEKGEV-YCQRCFRLRHY----NEIQDVQLTDDDF-----LKLLNELGSEDA-LI 84
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
V V+D DF+G SL L + K P L LVG KVDLLP + ++
Sbjct: 85 VNVIDIFDFNG--------SLIPGLH------RFVGKNPVL-LVGNKVDLLPKSLKRGKM 129
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
+W+R RA G + V L SA K + LL I++ R +V+V+G N GKSTL
Sbjct: 130 TQWLRERAHEEGL-RPEDVLLTSAMKPAEMEILLDAIEKHRKGR-DVFVVGVTNVGKSTL 187
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN K +T + PGTTL RI L L DTPG++H H M+ L +
Sbjct: 188 INQIIKSTAGVQDLITTSQFPGTTLD--RIEIPLDDGKNLIDTPGIIHRHQMAHVLGDKD 245
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
K++ +KE++P Y++ GQ + GG+ R D + + + T + S ++++H K+E
Sbjct: 246 LKLIAPKKEIKPIVYQLNEGQTLFFGGVARFDYLKGARHSF--TCFVSNDLNIHRTKLEK 303
Query: 535 ADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
ADE+++ VG LQPP +D + V + DI AGLGW ++
Sbjct: 304 ADELYQKQVGKLLQPP-REDEVDGFPELVRFEFSVKEKA------DIVFAGLGWVTVNEP 356
Query: 595 GEASLTLWTYDGIEITLREPLV 616
G + W GI++ +R+ L+
Sbjct: 357 G-CVVAGWAPKGIDVLIRKSLI 377
>gi|228477071|ref|ZP_04061709.1| ribosome biogenesis GTPase YqeH [Streptococcus salivarius SK126]
gi|228251090|gb|EEK10261.1| ribosome biogenesis GTPase YqeH [Streptococcus salivarius SK126]
Length = 372
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 196/401 (48%), Gaps = 47/401 (11%)
Query: 219 ERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVI 278
E +K + A KKA E GE+ C RC LR+Y NE+ + I D +F
Sbjct: 16 EDKEKAGYTPASSIKKAEET----GEL-YCQRCFRLRHY----NEIVDVHITDDEF---- 62
Query: 279 ATRLMKPSGNANAGVVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVL 337
+L+ G+++A +VV VVD DF+G + P + D ++L
Sbjct: 63 -LKLLHEVGDSDA-LVVNVVDIFDFNGSIIPG------LSRFVSGND----------VLL 104
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
VG K D+LP V ++ +W+ RA G ++ V L SA+ ++ L+ I++L
Sbjct: 105 VGNKKDILPKSVKDGKVTQWLTERAHEEGMRPVD-VMLTSAQNHHAIKELIQRIEKLRKS 163
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
R +V+V+G N GKSTLIN K+ +T + PGTTL + I L ++DT
Sbjct: 164 R-DVYVVGVTNVGKSTLINAIIKEITGDKDIITTSRFPGTTLDKIEIP--LDDGTYIFDT 220
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PG++H H M+ L+ + K V +KE++P+TY++ GQ + +GGL R D + +
Sbjct: 221 PGIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQTLFLGGLGRFDFIDGNKQGF-- 278
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
T + N+ LH K+E AD + HVG L PP +D A + + V +
Sbjct: 279 TAFFDNNLKLHRTKLEGADAFYDKHVGSLLMPPGPKDLA-DFPKLVRHEFTVKDKT---- 333
Query: 578 GIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
DI +GLGW + K + + W +G+ + +R+ ++
Sbjct: 334 --DIVFSGLGWIRVQGKADQPTIVAAWAPEGVGVVVRKAII 372
>gi|449919675|ref|ZP_21798074.1| GTP-binding protein YqeH [Streptococcus mutans 1SM1]
gi|449159247|gb|EMB62607.1| GTP-binding protein YqeH [Streptococcus mutans 1SM1]
Length = 368
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 191/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV V+D DF+G + P ++ + D L+LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNGSVIPG------LQRFISSND----------LLLVGNKADILPKSVKS 118
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GK
Sbjct: 119 GKITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGK 176
Query: 412 STLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
STLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 177 STLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLS 234
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K
Sbjct: 235 DKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTK 292
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 293 LAGADTFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--I 343
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 344 RINGRAKIAAWAPEGVTVVTRKALI 368
>gi|422853681|ref|ZP_16900345.1| GTP-binding protein [Streptococcus sanguinis SK160]
gi|325696992|gb|EGD38879.1| GTP-binding protein [Streptococcus sanguinis SK160]
Length = 368
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 189/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDSKVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEYCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L K + +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLTAKNLKYISPKKEIKPKTYQLNPNQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+E A + + HVG L PP+G+++ E + + + DI +GLGW
Sbjct: 290 RTKLEGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ I R+ ++
Sbjct: 343 IR--VSGPARVAGWAPEGVAIVTRKAII 368
>gi|172056802|ref|YP_001813262.1| GTP-binding protein YqeH [Exiguobacterium sibiricum 255-15]
gi|171989323|gb|ACB60245.1| Nitric-oxide synthase [Exiguobacterium sibiricum 255-15]
Length = 374
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 198/374 (52%), Gaps = 38/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E+ +C RC L++Y Q++ +VA + D DF +++ G +A +VV +VD DF
Sbjct: 38 EMVICQRCFKLKHYNQIQ-DVA---LTDDDF-----VKILDGIGQKDA-LVVKIVDIFDF 87
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K+D ++LVG K DLLP ++P RL W+R +K
Sbjct: 88 NGSWLPGLHRFV------GKND---------VLLVGNKADLLPKSLNPNRLMNWMRQTSK 132
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+L+SA+K GV L I R +V+V+G N GKSTLIN K+ G
Sbjct: 133 ELGLRPVD-VHLISAKKGHGVDELAEKIDYYRKGR-DVYVVGCTNVGKSTLINQVIKRFG 190
Query: 424 VKV-SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ + +T + PGTTL ++ I L LYDTPG+++ H M+ ++ + K++ +K
Sbjct: 191 EEEEAVITVSHFPGTTLDLIDIP--LDDNCNLYDTPGIINHHQMAHYVDARDLKLITPKK 248
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P+ +++ Q + GGL RLD + + + ++ S ++ +H K++ AD+++ NH
Sbjct: 249 EIKPQVFQIHPQQTLFFGGLARLDYMEGNKRSF--VIYMSNDLKVHRTKLDKADDLYANH 306
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP ++ E+ R + D DI +GLGW ++ KG + +
Sbjct: 307 NGELLSPP--NEKTLEMLPPLVRH---EFSLRDNMKTDIVFSGLGWVAVHGKG-GRVAAY 360
Query: 603 TYDGIEITLREPLV 616
G+ ++LRE LV
Sbjct: 361 APKGVAVSLREALV 374
>gi|449876633|ref|ZP_21782890.1| GTP-binding protein YqeH [Streptococcus mutans S1B]
gi|449252026|gb|EMC50018.1| GTP-binding protein YqeH [Streptococcus mutans S1B]
Length = 368
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 188/376 (50%), Gaps = 41/376 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E G++ C RC LR+Y NE+ + I D DF +L+ G++ A +VV V+D
Sbjct: 34 ESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA-LVVNVIDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G + S ++ + D L+LVG K D+LP V ++ +W+
Sbjct: 83 FDFNG-----SVISGLQRFISSND----------LLLVGNKADILPKSVKSGKITQWLME 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ + +T + PGTTL + I L + ++DTPG++H H M+ L+ K +
Sbjct: 186 EITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSDKALKYISP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GGL R D + T + N+ LH K+ AD +
Sbjct: 244 KKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKLAGADTFYD 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H+G L PP ++ A+ + + + D+ +GLGW + + G A +
Sbjct: 302 KHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IRINGRAKIA 352
Query: 601 LWTYDGIEITLREPLV 616
W +G+ + R+ L+
Sbjct: 353 AWAPEGVAVVTRKSLI 368
>gi|429205409|ref|ZP_19196686.1| GTPase YqeH [Lactobacillus saerimneri 30a]
gi|428146481|gb|EKW98720.1| GTPase YqeH [Lactobacillus saerimneri 30a]
Length = 369
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 182/377 (48%), Gaps = 44/377 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E G++ C RC LR+Y NEV + I D DF RL+ GN ++ ++V VVD
Sbjct: 36 ESGQL-YCQRCFRLRHY----NEVTDVNITDKDF-----LRLLDNIGNTDS-LIVNVVDI 84
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G SL L+ D + +LVG K DLLP + ++L W+R
Sbjct: 85 FDFNG--------SLIPGLQRFVGDNPI-------ILVGNKEDLLPKSLKRSKLQDWMRQ 129
Query: 361 RA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
A K G P+ V L SA+K + LL I + R +V V+G N GKSTLIN
Sbjct: 130 EANKQGLYPE--AVILTSAKKGFAIERLLRLIDKYRQGR-DVQVVGVTNVGKSTLINRII 186
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + +T + PGTTL RI + DTPG++H M+ L K+
Sbjct: 187 KQRIGIQNLITTSRFPGTTLD--RIEIPFGDGKNMIDTPGIIHKGQMAHYLTGKALKLAT 244
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P+ Y++ G Q + +G L R D VTV+ N+ +H K+ NAD +
Sbjct: 245 PQKEIKPKVYQLNGEQTLFLGALARFDFISGPKG---VTVYVDNNLMIHRTKMANADNFY 301
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
H G LQPP +D A+ K + VS + DI AGLGW + +K A +
Sbjct: 302 TKHAGELLQPPNQEDMAA-FPPLKRFEFTVSEKT------DIVFAGLGWIT--VKPGAKV 352
Query: 600 TLWTYDGIEITLREPLV 616
W + +++ +R ++
Sbjct: 353 AAWAPENVDVVVRRAMI 369
>gi|384176191|ref|YP_005557576.1| YqeH [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|349595415|gb|AEP91602.1| YqeH [Bacillus subtilis subsp. subtilis str. RO-NN-1]
Length = 366
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 186/373 (49%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ G ++ +VV +VD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDF-----LNILHGIGETDS-LVVKIVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L+ +L P ++LVG K D+LP + RL +W++ AK
Sbjct: 82 NG--------SWINGLQ------RLVGGNP-ILLVGNKADILPKSLKRERLIQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+LVSA + G+R ++ I+ + +V+V+G N GKST IN K+
Sbjct: 127 ELGLKPVD-VFLVSAGRGQGIREVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL + I L + LYDTPG+++ H M+ +N+ + K++ +KE
Sbjct: 185 GEEDIITTSQFPGTTLDAIEIP--LDDGSSLYDTPGIINNHQMAHYVNKKDLKILSPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S E + + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNDQQTLYFGGLARFDY--VSGERSPFICYMPNELMIHRTKLENADALYEKHA 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP G+D E + DI +GLGW ++ + +T +
Sbjct: 301 GELLTPP-GKDEMDEFPELVAHTFTIKAKK-----TDIVFSGLGWVTVH-DADKKVTAYA 353
Query: 604 YDGIEITLREPLV 616
G+ + +R L+
Sbjct: 354 PKGVHVFVRRSLI 366
>gi|422863178|ref|ZP_16909810.1| GTP-binding protein [Streptococcus sanguinis SK408]
gi|327473478|gb|EGF18898.1| GTP-binding protein [Streptococcus sanguinis SK408]
Length = 368
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 189/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDSKVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEYCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSHFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L K + +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLTAKNLKYISPKKEIKPKTYQLNPNQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+E A + + HVG L PP+G+++ E + + + DI +GLGW
Sbjct: 290 RTKLEGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 343 IR--VSGPARVAGWAPEGVAVVTRKAII 368
>gi|373464479|ref|ZP_09556017.1| ribosome biogenesis GTPase YqeH [Lactobacillus kisonensis F0435]
gi|371762400|gb|EHO50931.1| ribosome biogenesis GTPase YqeH [Lactobacillus kisonensis F0435]
Length = 378
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 189/376 (50%), Gaps = 40/376 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GEV C RC LR+Y NE+A + D DF +++ S + ++V VVD
Sbjct: 43 ENGEV-YCQRCFRLRHY----NEIAPVSLSDDDFLKLLT------SISDTDSLIVYVVDI 91
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
D +G S+ L + + +LVG K+D+LP+++ T++ W+R
Sbjct: 92 FDVNG--------SMIPGLHRFVGNNPI-------LLVGNKLDVLPARLKKTKVKDWLRQ 136
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
+A A G ++ V L+SA+ +L V LL I++ + +V+V+G N GKSTLIN+ +
Sbjct: 137 QANAAGIRPVD-VELISAKTNLDVDRLLDQIEKYRQGK-DVYVVGVTNVGKSTLINSIVR 194
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL RI L L DTPG++ P M+ L E +V
Sbjct: 195 QSTGIKELITTSRFPGTTLD--RIDIPLKDGKLLVDTPGIIQPEQMAHHLVGKELNLVTP 252
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+K ++P+ Y++ Q + GG+ R D + + TV+A N+ +H K+ENAD+ +
Sbjct: 253 QKRIKPKEYQLNPEQTLFFGGVARFDYNAGEGRRGF-TVYAENNLFIHRTKLENADDFYT 311
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
NHVG L PP +D + + K K++ S D+ GLGW + + S++
Sbjct: 312 NHVGSFLTPP-SEDDKDDFPPLEGHKFKITQKS------DLVIEGLGWIT--VPEGVSVS 362
Query: 601 LWTYDGIEITLREPLV 616
W G+ + +R ++
Sbjct: 363 GWAPTGVSVLIRPAMI 378
>gi|24380165|ref|NP_722120.1| GTPase YqeH [Streptococcus mutans UA159]
gi|449866835|ref|ZP_21779649.1| GTP-binding protein YqeH [Streptococcus mutans U2B]
gi|449869935|ref|ZP_21780374.1| GTP-binding protein YqeH [Streptococcus mutans 8ID3]
gi|449987024|ref|ZP_21820328.1| GTP-binding protein YqeH [Streptococcus mutans NFSM2]
gi|450081504|ref|ZP_21851769.1| GTP-binding protein YqeH [Streptococcus mutans N66]
gi|24378167|gb|AAN59426.1|AE015007_13 putative GTP-binding protein [Streptococcus mutans UA159]
gi|449157405|gb|EMB60847.1| GTP-binding protein YqeH [Streptococcus mutans 8ID3]
gi|449176868|gb|EMB79194.1| GTP-binding protein YqeH [Streptococcus mutans NFSM2]
gi|449215208|gb|EMC15419.1| GTP-binding protein YqeH [Streptococcus mutans N66]
gi|449263590|gb|EMC60960.1| GTP-binding protein YqeH [Streptococcus mutans U2B]
Length = 368
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 190/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRT- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L+SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILISAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLNKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|170287886|ref|YP_001738124.1| HSR1-like GTP-binding protein [Thermotoga sp. RQ2]
gi|170175389|gb|ACB08441.1| GTP-binding protein HSR1-related [Thermotoga sp. RQ2]
Length = 363
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 188/384 (48%), Gaps = 47/384 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
++ E + E+G+ +C RC +++YG++ E + D+DF + + L
Sbjct: 23 REVYERRLEEGKEILCQRCFRMKHYGKL-----EPVEFDWDFKNQLKSYL------GGFD 71
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
VVV V+D DF+G + + + L E K ++V K+DLLP ++
Sbjct: 72 VVVWVIDIFDFEGTYREDIVEIL-----EGK----------RVVYAINKIDLLPKAITVK 116
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+ WV+ R K + + +VSA K+ G+ +L+ ++ L V+G N GKS
Sbjct: 117 EIKEWVKKRIKVKNT---DDIRIVSAEKNFGLNSLVKYLSRLTD---KALVVGVTNVGKS 170
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
+L+N E T +P PGTTLGILR + A LYDTPG++ + L+
Sbjct: 171 SLLNKICTHEN------TISPFPGTTLGILR-RKVKEANLYLYDTPGIMTNDRILDLLDP 223
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ QK V R+EL +T++ G+ + +GGL R D+ + + +++S V+ H K
Sbjct: 224 ECQKRVLPREELSRKTFKPDNGRTIFMGGLCRFDIHFETEKNPIFLLFSSKEVTFHETKR 283
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
E ADE+ +N +G L PP + + WK + G ++A AGLGW S+
Sbjct: 284 ERADELMRNRLGDLLIPPCSKTKFENF-KWKRETFTLK------EGEELAVAGLGWMSVR 336
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+G ++ + D +++ +RE LV
Sbjct: 337 -RGPFTVVVTVPDNVKLVVREALV 359
>gi|77408261|ref|ZP_00785004.1| GTP-binding protein [Streptococcus agalactiae COH1]
gi|339300938|ref|ZP_08650063.1| GTP-binding protein [Streptococcus agalactiae ATCC 13813]
gi|421148017|ref|ZP_15607689.1| GTPase YqeH [Streptococcus agalactiae GB00112]
gi|77173119|gb|EAO76245.1| GTP-binding protein [Streptococcus agalactiae COH1]
gi|319745586|gb|EFV97887.1| GTP-binding protein [Streptococcus agalactiae ATCC 13813]
gi|401685355|gb|EJS81363.1| GTPase YqeH [Streptococcus agalactiae GB00112]
Length = 372
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 193/386 (50%), Gaps = 41/386 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + I D +F +L+ G+++A
Sbjct: 26 RAALEKGLETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G ++ + A +D ++LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNGSIIPGLSRFV------AGND---------VLLVGNKKDILPKSVKDG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G N GKS
Sbjct: 120 KVTQWLTERAHEEGLRPVD-VILTSAQNHHAIKDLIDTIEKYRHGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L + ++DTPG++H H M+ L
Sbjct: 178 TLINAIIREITGSRDVITTSRFPGTTLDKIEIP--LDDGSYIFDTPGIIHRHQMAHYLTA 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K V +KE++P+TY++ Q + + GL R D + T + N++LH K+
Sbjct: 236 KNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGF--TAYFDNNLNLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
ADE + HVG L PP G++ S+ + + + +DI +GLGW +
Sbjct: 294 VGADEFYTKHVGKLLTPPTGKE-VSDFPKLVRHEFTIK------DKMDIVYSGLGWIRVK 346
Query: 593 LKGEASLTL--WTYDGIEITLREPLV 616
+ E + + W +G+ + LR+ L+
Sbjct: 347 SEAENPVVVAAWAPEGVAVVLRKALI 372
>gi|422860728|ref|ZP_16907372.1| GTP-binding protein [Streptococcus sanguinis SK330]
gi|327469111|gb|EGF14583.1| GTP-binding protein [Streptococcus sanguinis SK330]
Length = 368
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDSKVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K + +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+E A + + HVG L PP+G+++ E + + + DI +GLGW
Sbjct: 290 RTKLEGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 343 IR--VSGPARIAGWAPEGVAVVTRKAII 368
>gi|449926275|ref|ZP_21800673.1| GTP-binding protein YqeH [Streptococcus mutans 4SM1]
gi|449160747|gb|EMB63989.1| GTP-binding protein YqeH [Streptococcus mutans 4SM1]
Length = 368
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 190/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSKA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAYEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|325569902|ref|ZP_08145896.1| GTP-binding protein [Enterococcus casseliflavus ATCC 12755]
gi|325157025|gb|EGC69193.1| GTP-binding protein [Enterococcus casseliflavus ATCC 12755]
Length = 377
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 186/384 (48%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF RL+ G A
Sbjct: 35 QSALEKGLESGEV-YCQRCFRLRHY----NEIQDVSLTDDDF-----LRLLNEIGEKEA- 83
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L + + +LVG KVD+LP + +
Sbjct: 84 LIVNVVDIFDFNG--------SLIPGLHRFVGNNPV-------LLVGNKVDILPKSLKKS 128
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W++ RA G ++ V L SA+K LL I+ R +V+V+G N GKS
Sbjct: 129 KMTQWMKERAHEAGLRPVD-VLLTSAKKPGETEALLQAIETYREGR-DVYVVGVTNVGKS 186
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K+ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 187 TLINQIIKQTAGINELITTSRFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 244
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K+V KE++P+ Y++ Q + +GGL R D Q E + + +V++H K+
Sbjct: 245 KDLKIVAPAKEIKPKVYQLNPEQTLFLGGLARFDFIQG--ERSSFIAYVANDVAIHRTKL 302
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
ADE ++ HVG LQPP RA E+ + + V DI AGLGW +
Sbjct: 303 SKADEFYEKHVGGLLQPP----RADEVADFPEL---VRFEFSIKEKTDIVFAGLGWIT-- 353
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ + W G+++ R+ LV
Sbjct: 354 ITKPCVIAGWAPKGVDVLRRKALV 377
>gi|422821793|ref|ZP_16869986.1| GTP-binding protein [Streptococcus sanguinis SK353]
gi|324990744|gb|EGC22680.1| GTP-binding protein [Streptococcus sanguinis SK353]
Length = 368
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDSKVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K + +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYISPKKEIKPKTYQLNPNQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+E A + + HVG L PP+G+++ E + + + DI +GLGW
Sbjct: 290 RTKLEGASDFYDKHVGGLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 343 IR--VSGPARVAGWAPEGVAVVTRKAII 368
>gi|449932299|ref|ZP_21802790.1| GTP-binding protein YqeH [Streptococcus mutans 3SN1]
gi|449161478|gb|EMB64664.1| GTP-binding protein YqeH [Streptococcus mutans 3SN1]
Length = 368
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 189/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF + + G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKFLHEVGDSKA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SIIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADTFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKSLI 368
>gi|422422215|ref|ZP_16499168.1| ribosome biogenesis GTPase YqeH [Listeria seeligeri FSL S4-171]
gi|313637776|gb|EFS03129.1| ribosome biogenesis GTPase YqeH [Listeria seeligeri FSL S4-171]
Length = 366
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 185/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ K + ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILNQISTKQA------LIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGNN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA + G LL I+EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLSATD-VVLVSAERGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H ++ D K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQXXXFIDTDTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E AD ++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKADALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ G LQPP +E G KL V T DI +GLGW ++ +G A +
Sbjct: 298 EKQAGFVLQPP------TEEGMKTLPKL-VPYTFNVKEKADIVFSGLGWVTIP-EGGAKV 349
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 350 TAWVPEGVSATIRTSLV 366
>gi|125717436|ref|YP_001034569.1| GTP-binding protein YqeH [Streptococcus sanguinis SK36]
gi|125497353|gb|ABN44019.1| Conserved GTPase, putative [Streptococcus sanguinis SK36]
Length = 368
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDSKVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K + +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+E A + + HVG L PP+G+++ E + + + DI +GLGW
Sbjct: 290 RTKLEGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 343 IR--VSGPARVAGWAPEGVAVVTRKAII 368
>gi|257087775|ref|ZP_05582136.1| nitric-oxide synthase [Enterococcus faecalis D6]
gi|256995805|gb|EEU83107.1| nitric-oxide synthase [Enterococcus faecalis D6]
Length = 375
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 192/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GEV C RC LR+Y N++ + + D DF RL+ G +A
Sbjct: 33 KTAFEKGMETGEV-YCQRCFRLRHY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 81
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP +
Sbjct: 82 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKP 126
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R RA G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 127 KMVQWMRERAHEAGLRPVD-VLLTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKS 184
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 185 TLINQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 242
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S +++LH K
Sbjct: 243 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLNLHRTKT 300
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDV-NGIDIAAAGLGWFSL 591
AD ++ HVG LQPP RA E+ + + + + V DI AGLGW ++
Sbjct: 301 ATADAFYEKHVGGLLQPP----RADEVAEFPE----LVRFEFSVKEKTDIVFAGLGWITV 352
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
G + W +G+++ R+ L+
Sbjct: 353 TEPG--VVAGWAPEGVDVLRRKALI 375
>gi|449887306|ref|ZP_21786721.1| GTP-binding protein YqeH [Streptococcus mutans SA41]
gi|449904711|ref|ZP_21792811.1| GTP-binding protein YqeH [Streptococcus mutans M230]
gi|449938690|ref|ZP_21805016.1| GTP-binding protein YqeH [Streptococcus mutans 2ST1]
gi|449942606|ref|ZP_21806101.1| GTP-binding protein YqeH [Streptococcus mutans 11A1]
gi|450039516|ref|ZP_21836227.1| GTP-binding protein YqeH [Streptococcus mutans T4]
gi|450078570|ref|ZP_21851060.1| GTP-binding protein YqeH [Streptococcus mutans N3209]
gi|450154621|ref|ZP_21877857.1| GTP-binding protein YqeH [Streptococcus mutans 21]
gi|450181255|ref|ZP_21887717.1| GTP-binding protein YqeH [Streptococcus mutans 24]
gi|449150345|gb|EMB54113.1| GTP-binding protein YqeH [Streptococcus mutans 11A1]
gi|449162533|gb|EMB65664.1| GTP-binding protein YqeH [Streptococcus mutans 2ST1]
gi|449200330|gb|EMC01363.1| GTP-binding protein YqeH [Streptococcus mutans T4]
gi|449209880|gb|EMC10376.1| GTP-binding protein YqeH [Streptococcus mutans N3209]
gi|449237723|gb|EMC36538.1| GTP-binding protein YqeH [Streptococcus mutans 21]
gi|449246925|gb|EMC45219.1| GTP-binding protein YqeH [Streptococcus mutans 24]
gi|449253035|gb|EMC51000.1| GTP-binding protein YqeH [Streptococcus mutans SA41]
gi|449259062|gb|EMC56610.1| GTP-binding protein YqeH [Streptococcus mutans M230]
Length = 368
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 190/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRT- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L+SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILISAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADTFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|422883434|ref|ZP_16929883.1| GTP-binding protein [Streptococcus sanguinis SK49]
gi|332363372|gb|EGJ41157.1| GTP-binding protein [Streptococcus sanguinis SK49]
Length = 368
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 189/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV V+D DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V ++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDGKVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K V +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K++ A E + HVG L PP+G++R E + + + DI +GLGW
Sbjct: 290 RTKLQGASEFYDKHVGSLLVPPVGKER-EEFPALVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 343 IR--VSGPARVAGWVPEGVAVVTRKAII 368
>gi|422723394|ref|ZP_16779930.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2137]
gi|424671902|ref|ZP_18108889.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis 599]
gi|315026558|gb|EFT38490.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2137]
gi|402357870|gb|EJU92567.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis 599]
Length = 369
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 189/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GEV C RC LR+Y N++ + + D DF RL+ G +A
Sbjct: 27 KTAFEKGMETGEV-YCQRCFRLRHY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP +
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKP 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R RA G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 121 KMVQWMRERAHEAGLRPVD-VLLTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S +++LH K
Sbjct: 237 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLNLHRTKT 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD ++ HVG LQPP D +E + V + DI AGLGW ++
Sbjct: 295 ATADAFYEKHVGGLLQPPRA-DEVAEFPELVRFEFSVKEKT------DIVFAGLGWITVT 347
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
G + W +G+++ R+ L+
Sbjct: 348 EPG--VVAGWAPEGVDVLRRKALI 369
>gi|304384686|ref|ZP_07367032.1| ribosome biogenesis GTPase YqeH [Pediococcus acidilactici DSM
20284]
gi|304328880|gb|EFL96100.1| ribosome biogenesis GTPase YqeH [Pediococcus acidilactici DSM
20284]
Length = 369
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 185/377 (49%), Gaps = 44/377 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E G++ C RC LR+Y NE+A I D DF ++++ + + +VV VVD
Sbjct: 36 ESGQL-YCQRCFRLRHY----NEIAPVSISDDDFRKLLS------QISDSDSLVVYVVDM 84
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G SL L D + +LVG K D+ P + R+ W+R
Sbjct: 85 FDFNG--------SLIPGLHRFVGDNPV-------LLVGNKADVFPKSIKRHRMREWLRQ 129
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF-A 419
+AKA G ++ V + SA++ V L I++L R +V+V+G N GKSTLIN+ A
Sbjct: 130 QAKANGIEPVD-VMITSAKQRPAVEQLFDKIEQLRDGR-DVYVVGVTNVGKSTLINSLIA 187
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
+ G+K +T + PGTTL RI +K+ DTPG++H M+ L ++ K +
Sbjct: 188 LRNGIK-DVITTSRFPGTTLD--RIEIPFDDHSKMIDTPGIVHNDQMAHVLTAEDLKYIS 244
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+K ++PR Y++ Q + G L R D + + T VT + N+ +H K+ NAD +
Sbjct: 245 PKKTIKPRVYQLGDEQTLFAGALARFDYENS---TGSVTAYFDNNLMIHRTKLANADHFY 301
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ H G L PP ++ A+ L K+ S D+ GLGW + + + +
Sbjct: 302 EKHAGELLTPPAAENLAN-LPELARHHFKIEEDS------DVVFEGLGW--IAVPAGSVV 352
Query: 600 TLWTYDGIEITLREPLV 616
T W GI + +R L+
Sbjct: 353 TAWAPKGISVVIRRALI 369
>gi|422824158|ref|ZP_16872346.1| GTP-binding protein [Streptococcus sanguinis SK405]
gi|422856095|ref|ZP_16902753.1| GTP-binding protein [Streptococcus sanguinis SK1]
gi|422866065|ref|ZP_16912690.1| GTP-binding protein [Streptococcus sanguinis SK1058]
gi|324993485|gb|EGC25405.1| GTP-binding protein [Streptococcus sanguinis SK405]
gi|327461756|gb|EGF08087.1| GTP-binding protein [Streptococcus sanguinis SK1]
gi|327489041|gb|EGF20836.1| GTP-binding protein [Streptococcus sanguinis SK1058]
Length = 368
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 189/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDSKVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEYCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L K + +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLTAKNLKYISPKKEIKPKTYQLNPNQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+E A + + HVG L PP+G+++ E + + + DI +GLGW
Sbjct: 290 RTKLEGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 343 IR--VSGPARVAGWAPEGVAVVTRKAII 368
>gi|407476612|ref|YP_006790489.1| ribosome biogenesis protein GTPase YqeH [Exiguobacterium
antarcticum B7]
gi|407060691|gb|AFS69881.1| Ribosome biogenesis protein GTPase YqeH [Exiguobacterium
antarcticum B7]
Length = 368
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 198/374 (52%), Gaps = 38/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E+ +C RC L++Y Q++ +VA + D DF +++ G +A +VV +VD DF
Sbjct: 32 EMVICQRCFKLKHYNQIQ-DVA---LTDDDF-----VKILDGIGQKDA-LVVKIVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K+D ++LVG K DLLP ++P RL W+R +K
Sbjct: 82 NGSWLPGLHRFV------GKND---------VLLVGNKADLLPKSLNPNRLMNWMRQTSK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+L+SA+K GV L I R +V+V+G N GKSTLIN K+ G
Sbjct: 127 ELGLRPVD-VHLISAKKGHGVDELAEKIDYYRKGR-DVYVVGCTNVGKSTLINQVIKRFG 184
Query: 424 VKV-SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ + +T + PGTTL ++ I L LYDTPG+++ H M+ ++ + K++ +K
Sbjct: 185 EEEEAVITVSHFPGTTLDLIDIP--LDDNCNLYDTPGIINHHQMAHYVDGRDLKLITPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P+ +++ Q + GGL RLD + + + ++ S ++ +H K++ AD+++ NH
Sbjct: 243 EIKPQVFQIHPQQTLFFGGLARLDYMEGNKRSF--VIYMSNDLKVHRTKLDKADDLYANH 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP ++ E+ R + D DI +GLGW ++ KG + +
Sbjct: 301 NGELLSPP--NEKTLEMLPPLVRH---EFSLRDNMKTDIVFSGLGWVAVHGKG-GRVAAY 354
Query: 603 TYDGIEITLREPLV 616
G+ ++LRE LV
Sbjct: 355 APKGVAVSLREALV 368
>gi|397650376|ref|YP_006490903.1| GTPase YqeH [Streptococcus mutans GS-5]
gi|449893715|ref|ZP_21788892.1| GTP-binding protein YqeH [Streptococcus mutans SF12]
gi|450098940|ref|ZP_21858241.1| GTP-binding protein YqeH [Streptococcus mutans SF1]
gi|392603945|gb|AFM82109.1| GTPase YqeH [Streptococcus mutans GS-5]
gi|449221126|gb|EMC20928.1| GTP-binding protein YqeH [Streptococcus mutans SF1]
gi|449255714|gb|EMC53558.1| GTP-binding protein YqeH [Streptococcus mutans SF12]
Length = 368
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 190/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRT- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L+SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILISAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|449915664|ref|ZP_21796411.1| GTP-binding protein YqeH [Streptococcus mutans 15JP3]
gi|449156142|gb|EMB59622.1| GTP-binding protein YqeH [Streptococcus mutans 15JP3]
Length = 368
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 189/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF + + G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKFLHEVGDSKA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SIIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADTFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|340399488|ref|YP_004728513.1| nitric-oxide synthase (GTPase) [Streptococcus salivarius CCHSS3]
gi|338743481|emb|CCB93991.1| nitric-oxide synthase (GTPase) [Streptococcus salivarius CCHSS3]
Length = 372
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 196/401 (48%), Gaps = 47/401 (11%)
Query: 219 ERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVI 278
E +K + A KKA E GE+ C RC LR+Y NE+ + I D +F
Sbjct: 16 EDKEKAGYTPASSIKKAEET----GEL-YCQRCFRLRHY----NEIVDVHITDDEF---- 62
Query: 279 ATRLMKPSGNANAGVVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVL 337
+L+ G+++A +VV VVD DF+G + P + D ++L
Sbjct: 63 -LKLLHEVGDSDA-LVVNVVDIFDFNGSIIPG------LSRFVSGND----------VLL 104
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
VG K D+LP V ++ +W+ RA G ++ V L SA+ ++ L+ I++L
Sbjct: 105 VGNKKDILPKSVKDGKVTQWLTERAHEEGMRPVD-VMLTSAQNHHAIKELIQRIEKLRKG 163
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
R +V+V+G N GKSTLIN K+ +T + PGTTL + I L ++DT
Sbjct: 164 R-DVYVVGVTNVGKSTLINAIIKEITGDKDIITTSRFPGTTLDKIEIP--LDDGTYIFDT 220
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PG++H H M+ L+ + K V +KE++P+TY++ GQ + +GGL R D + +
Sbjct: 221 PGIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQTLFLGGLGRFDFIDGNKQGF-- 278
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
T + N+ LH K+E AD + HVG L PP +D A + + V +
Sbjct: 279 TAFFDNNLKLHRTKLEGADAFYDKHVGSLLMPPGPKDLA-DFPKLIRHEFTVKDKT---- 333
Query: 578 GIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
DI +GLGW + K + + W +G+ + +R+ ++
Sbjct: 334 --DIVFSGLGWIRVQGKADQPTIVAAWAPEGVGVVVRKAII 372
>gi|401682347|ref|ZP_10814241.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. AS14]
gi|400184783|gb|EJO19021.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. AS14]
Length = 368
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDSKVTQWLMERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEYCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K + +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYISPKKEIKPKTYQLNPNQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+E A + + HVG L PP+G+++ E + + + DI +GLGW
Sbjct: 290 RTKLEGASDFYDKHVGSLLVPPVGKEK-KEFPALVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 343 IR--VSGPARVAGWAPEGVAVVTRKAII 368
>gi|254824450|ref|ZP_05229451.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J1-194]
gi|254992210|ref|ZP_05274400.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J2-064]
gi|255520851|ref|ZP_05388088.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J1-175]
gi|293593687|gb|EFG01448.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J1-194]
Length = 366
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 186/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G L I+EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLAATD-VVLVSAEKGHGFDTLSEKIEELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E AD ++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKADALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ GI LQPP +E G KL V + DI +GLGW ++ +G A +
Sbjct: 298 EKQAGIVLQPP------TEEGMETLPKL-VPYSFTIKEKADIVFSGLGWVTIP-EGGAKV 349
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 350 TAWVPEGVSATIRTSLV 366
>gi|229918235|ref|YP_002886881.1| GTP-binding protein YqeH [Exiguobacterium sp. AT1b]
gi|229469664|gb|ACQ71436.1| Nitric-oxide synthase [Exiguobacterium sp. AT1b]
Length = 370
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 191/374 (51%), Gaps = 38/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E+ +C RC L++Y N+V + + D DF R++ ++ +V+ +VD DF
Sbjct: 34 EIVICQRCFKLKHY----NQVQDVELSDDDFLRILN------GISSKEALVIKIVDIFDF 83
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + +S+ ++LVG KVDLLP V+P R+ W++ AK
Sbjct: 84 NGSWLPGLQRSVGSN---------------PVLLVGNKVDLLPKSVNPNRMANWMKAEAK 128
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+L+SA+K G+ L I E +V+V+G N GKSTLIN K+ G
Sbjct: 129 ELGLNPID-VHLISAKKGHGIDELAEKI-EYYRKGKDVFVVGCTNVGKSTLINQVIKRFG 186
Query: 424 VK-VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ + +T + PGTTL ++ I A LYDTPG+++ H M+ ++ + K + +K
Sbjct: 187 EEDEAIITVSHFPGTTLDLIDIPLD--DDANLYDTPGIINRHQMAHYVDAKDLKTITPKK 244
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q ++ GGL RLD + + + ++ S + H K+E ADE++ H
Sbjct: 245 EIKPHVFQLNPQQTLYFGGLARLDYLEGNKRSF--VIYMSNELKAHRTKLERADELYDQH 302
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
+G L PP ++ E+ R + D DI +GLGW ++ KG + W
Sbjct: 303 IGKMLNPP--NEKTLEILPPLVRH---EFSLRDGVKTDIVFSGLGWVAIHGKG-GRIAAW 356
Query: 603 TYDGIEITLREPLV 616
G+ +TLRE LV
Sbjct: 357 APKGVAVTLREALV 370
>gi|94993651|ref|YP_601749.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS10750]
gi|94547159|gb|ABF37205.1| GTP-binding protein [Streptococcus pyogenes MGAS10750]
Length = 372
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 190/378 (50%), Gaps = 41/378 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+ + I D +F RL+ G+++A +VV V+D
Sbjct: 34 ETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LRLLHEVGDSDA-LVVNVIDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G ++ + + +D ++LVG K D+LP V ++ +W+
Sbjct: 83 FDFNGSIIPGLSRFI------SGND---------VLLVGNKKDILPKSVKDGKVTQWLTE 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G L+ V L SA+ +++L+ I EL R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGLRPLD-VMLTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL + I L + ++DTPG++H H M+ L+ E K+V
Sbjct: 186 EITGDKDVITTSRFPGTTLDKIEIP--LDDGSFIFDTPGIIHRHQMAHYLSPKELKIVSP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GGL R D + T + + LH K++ AD +
Sbjct: 244 KKEIKPKTYQLNSEQTLFLGGLSRFDFINGERQGF--TAFFDNQLELHRTKLDGADAFYD 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL-GLK-GEAS 598
HVG L PP G+ + + + +DI +GLGW + G K +A
Sbjct: 302 KHVGTLLTPP-GKKELTAFPKLVRHEFTID------QKMDIVFSGLGWIRVNGQKDSKAI 354
Query: 599 LTLWTYDGIEITLREPLV 616
+ W +G+ + +R+ ++
Sbjct: 355 VAAWAPEGVAVIVRKAII 372
>gi|433444333|ref|ZP_20409252.1| ribosome biogenesis GTPase YqeH [Anoxybacillus flavithermus
TNO-09.006]
gi|432001625|gb|ELK22498.1| ribosome biogenesis GTPase YqeH [Anoxybacillus flavithermus
TNO-09.006]
Length = 367
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 186/370 (50%), Gaps = 38/370 (10%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC L++Y NEV + + D DF ++ G A+ G+VV +VD DF+G
Sbjct: 36 ICQRCFRLKHY----NEVQDVSLTDDDF-----LNILHGIGQAD-GLVVKIVDIFDFNGS 85
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
+ + + KK ++LVG KVDLLP V ++ RW++ A+ G
Sbjct: 86 WLPGLHRFVGKK---------------DVLLVGNKVDLLPKSVKHEKVTRWMKQTARELG 130
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
+ V+LVSA K G++ ++ I E + +V+V+G N GKST IN K+ K
Sbjct: 131 L-QPRDVFLVSAHKGYGMKEVMTAIDEYRNGK-DVYVVGCTNVGKSTFINRIIKEATGKG 188
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+ +T + PGTTL ++ I L + LYDTPG+++ H M+ +++ + K++ +KE++P
Sbjct: 189 NVITTSYFPGTTLDMIEIP--LDDGSALYDTPGIINHHQMAHFVDKKDLKVITPKKEIKP 246
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
+ Y++ Q + GGL RLD + S + +H K E+ADE+++ H+G
Sbjct: 247 KVYQLNEQQTLFFGGLARLDYVSGGRRPF--VCYMSNELFIHRTKREHADELYERHLGEL 304
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
LQPP + +L + DI +GLGW + G A + + G
Sbjct: 305 LQPP-RKSYCEQLPPLVAHHFTLKEPK-----TDIVFSGLGWVTCHEPG-AQVIAYAPKG 357
Query: 607 IEITLREPLV 616
+ + LR+ L+
Sbjct: 358 VGVMLRKSLI 367
>gi|251781782|ref|YP_002996084.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390411|dbj|BAH80870.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
Length = 372
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 189/378 (50%), Gaps = 41/378 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+ + I D +F RL+ G+++A +VV V+D
Sbjct: 34 ETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LRLLHEVGDSDA-LVVNVIDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G ++ + + +D ++LVG K D+LP V ++ +W+
Sbjct: 83 FDFNGSIIPGLSRFI------SGND---------VLLVGNKKDILPKSVKDGKVTQWLTE 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G L+ V L SA+ +++L+ I EL R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGLRPLD-VMLTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL + I L + ++DTPG++H H M+ L+ E K+V
Sbjct: 186 EITGDKDVITTSRFPGTTLDKIEIP--LDDGSFIFDTPGIIHRHQMAHYLSPKELKIVSP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GGL R D + T + + LH K+ AD +
Sbjct: 244 KKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TAFFDNQLELHRTKLAGADAFYD 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK--GEAS 598
HVG L PP G+ + + + +DI +GLGW + ++ +A
Sbjct: 302 KHVGTLLTPP-GKKELTAFPKLVRHEFTID------QKMDIVFSGLGWIRVNVQKDSKAI 354
Query: 599 LTLWTYDGIEITLREPLV 616
+ W +G+ + +R+ ++
Sbjct: 355 VAAWAPEGVAVIVRKAII 372
>gi|450067533|ref|ZP_21846692.1| GTP-binding protein YqeH [Streptococcus mutans NLML9]
gi|449207955|gb|EMC08597.1| GTP-binding protein YqeH [Streptococcus mutans NLML9]
Length = 368
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 189/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF + + G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDNDF-----LKFLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADTFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|307286839|ref|ZP_07566921.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0109]
gi|306502054|gb|EFM71340.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0109]
Length = 369
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 191/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GEV C RC LR+Y N++ + + D DF RL+ G +A
Sbjct: 27 KTAFEKGMETGEV-YCQRCFRLRHY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP +
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKP 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R RA G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 121 KMVQWMRERAHEAGLRPVD-VLLTSGKKPQEMQELLDTIEKYREDR-DVYVVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S +++LH K
Sbjct: 237 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLNLHRTKT 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDR-KLKVSGTSWDVNGIDIAAAGLGWFSL 591
AD ++ HVG LQPP RA E+ + + + + S DI AGLGW ++
Sbjct: 295 ATADAFYEKHVGGLLQPP----RADEVAEFPELVRFEFSVKE----KTDIVFAGLGWITV 346
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
G + W G+++ R+ L+
Sbjct: 347 TEPG--VVAGWAPKGVDVLRRKALI 369
>gi|322386055|ref|ZP_08059694.1| GTP-binding protein [Streptococcus cristatus ATCC 51100]
gi|417922565|ref|ZP_12566053.1| ribosome biogenesis GTPase YqeH [Streptococcus cristatus ATCC
51100]
gi|321269899|gb|EFX52820.1| GTP-binding protein [Streptococcus cristatus ATCC 51100]
gi|342832662|gb|EGU66957.1| ribosome biogenesis GTPase YqeH [Streptococcus cristatus ATCC
51100]
Length = 368
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLEIGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDSKVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDVITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K V +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+E A + HVG L PP+G+++ E + + + + DI +GLGW
Sbjct: 290 RTKLEGASGFYDKHVGSLLVPPVGKEK-EEFPSLVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ A + W G+++ LR+ ++
Sbjct: 343 IR--VNDRAKVAAWAPKGVDVVLRKAII 368
>gi|326803787|ref|YP_004321605.1| ribosome biogenesis GTPase YqeH [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650122|gb|AEA00305.1| ribosome biogenesis GTPase YqeH [Aerococcus urinae
ACS-120-V-Col10a]
Length = 370
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 188/384 (48%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A + E G++ C RC LR+Y Q+ E + +F R + + +
Sbjct: 28 KSAYDKGVESGDL-YCQRCFKLRHYNQL--EKVQMTPAEF--------RQILHEISEDDA 76
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V V+D D ++ LE + + V V KVDLLPS V +
Sbjct: 77 LIVNVIDIFD--------VQSTIIPALERLVGNNDI-------VFVANKVDLLPSDVKSS 121
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+++ W+R K G K V+L SA K+ + +L +FI + R NV+++G N GKS
Sbjct: 122 KIEAWLRKYLKDQGF-KARNVFLTSAVKNKAIDDLFSFIDQHRKGR-NVYIVGVSNVGKS 179
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN+ + +G S +T + PGTTL +++I + L DTPG+L M+ L+
Sbjct: 180 TLINSMLRAQGFSDSVITTSQFPGTTLDLIKIP--FDEASDLIDTPGILKDSQMTTLLDY 237
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ + +K ++PRT+++ GQ++ +GG+ R D + + + VTV+ S V +H K
Sbjct: 238 KSIEQILPQKRIKPRTFQLNPGQSLFLGGMARFDYLEGAKQG--VTVYLSNQVDIHRRKT 295
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
E +DE H G L PP ASE+ + D VS D+ AGLGW S+
Sbjct: 296 EGSDEFLAKHQGDLLTPP----SASEVERFPDL---VSQVYTIKEPCDLVIAGLGWLSIK 348
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
G+ + ++ ++I R+PL+
Sbjct: 349 KPGKVA--IYAPKAVDIFQRKPLI 370
>gi|407978439|ref|ZP_11159270.1| GTPase YqeH [Bacillus sp. HYC-10]
gi|407414997|gb|EKF36613.1| GTPase YqeH [Bacillus sp. HYC-10]
Length = 366
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 190/374 (50%), Gaps = 40/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + + DF ++ G ++ ++V VVD DF
Sbjct: 32 EDVICQRCFRLKNY----NEIQDVSLTEDDF-----LNILHSIGETDS-LIVKVVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + ++ + ++LVG KVD+LP V RL +W++ AK
Sbjct: 82 NGSWINGLSRIVGGN---------------PILLVGNKVDILPKSVKKDRLVQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+L+SA + GV ++ I R NV+V+G N GKST IN K+
Sbjct: 127 ENGLNPID-VFLISASRGQGVPEVMEAIDHYRDGR-NVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L + L+DTPG+++ H M+ +++++ K++ +KE
Sbjct: 185 GEENVITTSQYPGTTLDAIEIP--LDDGSALFDTPGIINRHQMAHYVDKNDLKILTPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPN-VSLHLGKIENADEIWKNH 542
L+PRT+++ Q ++ GGL R D + + V PN +++H K+ENAD++++ H
Sbjct: 243 LKPRTFQLNEAQTLYFGGLARFDYVKGGRTSF---VCYMPNELNIHRTKLENADDLYEKH 299
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP S+ G L + D DI +GLGW + G+ + ++
Sbjct: 300 AGELLSPP------SKEGMEDFPPLVPHTFTIDQPKTDIVFSGLGWVTANDAGK-QIKVY 352
Query: 603 TYDGIEITLREPLV 616
G+ + +R L+
Sbjct: 353 APKGVHVFMRRSLI 366
>gi|422702221|ref|ZP_16760059.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1302]
gi|315166303|gb|EFU10320.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1302]
Length = 369
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 191/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GEV C RC LR+Y N++ + + D DF RL+ G +A
Sbjct: 27 KTAFEKGMETGEV-YCQRCFRLRHY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP +
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKP 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R RA G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 121 KMVQWMRERAHEAGLRPVD-VLLTSGKKPQEMQELLDTIEKYREDR-DVYVVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S +++LH K
Sbjct: 237 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLNLHRTKT 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDV-NGIDIAAAGLGWFSL 591
AD ++ HVG LQPP RA E+ + + + + V DI AGLGW ++
Sbjct: 295 ATADAFYEKHVGGLLQPP----RADEVAEFPE----LVRFEFSVKEKTDIVFAGLGWITV 346
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
G + W G+++ R+ L+
Sbjct: 347 TEPG--VVAGWAPKGVDVLRRKALI 369
>gi|422881687|ref|ZP_16928143.1| GTP-binding protein [Streptococcus sanguinis SK355]
gi|332363929|gb|EGJ41708.1| GTP-binding protein [Streptococcus sanguinis SK355]
Length = 368
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 191/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV VVD DF+G + + A +D ++LVG K D+LP V +
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFI------AGND---------VLLVGNKKDILPKSVKDS 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N GKS
Sbjct: 120 KVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L + +YDTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAHYLSA 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K + +KE++P+TY++ Q + +GGL R D + T + + LH K+
Sbjct: 236 NNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
E A + HVG L PP+G+++ E + + + DI +GLGW
Sbjct: 294 EGASGFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGWIR-- 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 345 VSGPARVAGWAPEGVTVVTRKAII 368
>gi|257875519|ref|ZP_05655172.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC20]
gi|257809685|gb|EEV38505.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC20]
Length = 372
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 186/384 (48%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF RL+ G A
Sbjct: 30 QSALEKGLESGEV-YCQRCFRLRHY----NEIQDVSLTDDDF-----LRLLNEIGEKEA- 78
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L + + +LVG KVD+LP + +
Sbjct: 79 LIVNVVDIFDFNG--------SLIPGLHRFVGNNPV-------LLVGNKVDILPKSLKKS 123
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W++ RA G ++ V L SA+K LL I+ R +V+V+G N GKS
Sbjct: 124 KMTQWMKERAHEAGLRPVD-VLLTSAKKPGETEALLQAIETYREGR-DVYVVGVTNVGKS 181
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K+ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 182 TLINQIIKQTAGINELITTSRFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 239
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K+V KE++P+ Y++ Q + +GGL R D Q E + + +V++H K+
Sbjct: 240 KDLKIVAPAKEIKPKVYQLNPEQTLFLGGLARFDFIQG--ERSSFIAYVANDVAIHRTKL 297
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
ADE ++ HVG LQPP RA E+ + + V DI AGLGW +
Sbjct: 298 TKADEFYEKHVGGLLQPP----RADEVADFPEL---VRFEFSIKEKTDIVFAGLGWIT-- 348
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ + W G+++ R+ LV
Sbjct: 349 ITKPCVIAGWAPKGVDVLRRKALV 372
>gi|387929813|ref|ZP_10132490.1| GTPase YqeH [Bacillus methanolicus PB1]
gi|387586631|gb|EIJ78955.1| GTPase YqeH [Bacillus methanolicus PB1]
Length = 368
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 190/376 (50%), Gaps = 39/376 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
EK +V +C RC L++Y NE+ + + D DF +++ G +++ ++V +VD
Sbjct: 32 EKDQV-ICQRCFRLKHY----NEIQDVNLTDDDF-----LKILNKIGKSDS-LIVKIVDI 80
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G S L K++LVG KVDLLP V +L W++
Sbjct: 81 FDFNG--------SWLPGLHRFAGGN-------KILLVGNKVDLLPKSVKHNKLIHWMKQ 125
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
A+ G K V+LVSA K ++ A I + + +V+V+G N GKST IN K
Sbjct: 126 EARELGL-KPEEVFLVSAAKGHFIKKTAAAIDDYRQGK-DVYVVGCTNVGKSTFINRIIK 183
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ + +T + PGTTL I++I L L DTPG+++ H M+ +++ + K +
Sbjct: 184 EVSGEGDIITTSHFPGTTLDIIKIP--LDDDKFLMDTPGIINHHQMAHFVDKRDLKTITP 241
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+ Y++ GQ + GGL R D + T + S ++ +H K+ENA E++
Sbjct: 242 KKEIKPKVYQLNEGQTLFFGGLARFDYLTGGRRSF--TCYLSNDLLIHRTKLENASELYN 299
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
NHVG L PP R +L ++ KL DI +GLGW ++ G A++
Sbjct: 300 NHVGEMLSPP----RKEQLDSFP--KLVRHEFMIKEGKTDIVFSGLGWVTVNEPG-ANVA 352
Query: 601 LWTYDGIEITLREPLV 616
+ G+ + LR+ L+
Sbjct: 353 AYVPKGVHVVLRKSLI 368
>gi|450010364|ref|ZP_21828633.1| GTP-binding protein YqeH [Streptococcus mutans A19]
gi|450023323|ref|ZP_21830536.1| GTP-binding protein YqeH [Streptococcus mutans U138]
gi|450116249|ref|ZP_21864385.1| GTP-binding protein YqeH [Streptococcus mutans ST1]
gi|449190218|gb|EMB91807.1| GTP-binding protein YqeH [Streptococcus mutans A19]
gi|449193636|gb|EMB95015.1| GTP-binding protein YqeH [Streptococcus mutans U138]
gi|449227139|gb|EMC26583.1| GTP-binding protein YqeH [Streptococcus mutans ST1]
Length = 368
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 188/384 (48%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP + + + + + D+ +GLGW +
Sbjct: 294 AGADAFYDKHIGSLLTPP-DKKEMTAFPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 345 INGRAKIAAWAPEGVAVVTRKALI 368
>gi|422846086|ref|ZP_16892769.1| GTP-binding protein [Streptococcus sanguinis SK72]
gi|325688137|gb|EGD30156.1| GTP-binding protein [Streptococcus sanguinis SK72]
Length = 368
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 189/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLEAGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ ++ L+ I+ R +V+V+G N
Sbjct: 116 VKDSKVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKELIDKIEHCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K + +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+E A + + HVG L PP+G+++ E + + + DI +GLGW
Sbjct: 290 RTKLEGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 343 IRVS--GPARVAGWAPEGVAVVTRKAII 368
>gi|410595040|ref|YP_006951767.1| GTP-binding protein, riobosome biogenesis, YqeH [Streptococcus
agalactiae SA20-06]
gi|421532122|ref|ZP_15978491.1| GTPase YqeH [Streptococcus agalactiae STIR-CD-17]
gi|403642630|gb|EJZ03456.1| GTPase YqeH [Streptococcus agalactiae STIR-CD-17]
gi|410518679|gb|AFV72823.1| GTP-binding protein, riobosome biogenesis, YqeH [Streptococcus
agalactiae SA20-06]
Length = 372
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 193/386 (50%), Gaps = 41/386 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + + D +F +L+ G+++A
Sbjct: 26 RAALEKGLETGEL-YCQRCFRLRHY----NEITDVHVTDDEF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G ++ + A +D ++LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNGSIIPGLSRFV------AGND---------VLLVGNKKDILPKSVKDG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G N GKS
Sbjct: 120 KVTQWLTERAHEEGLRPVD-VILTSAQNHHAIKDLIDTIEKYRHGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L + ++DTPG++H H M+ L
Sbjct: 178 TLINAIIREITGSRDVITTSRFPGTTLDKIEIP--LDDGSYIFDTPGIIHRHQMAHYLTA 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K V +KE++P+TY++ Q + + GL R D + T + N++LH K+
Sbjct: 236 KNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGF--TAYFDNNLNLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
ADE + HVG L PP G++ S+ + + + +DI +GLGW +
Sbjct: 294 IGADEFYTKHVGKLLTPPTGKE-VSDFPKLVRHEFTIK------DKMDIVYSGLGWIRVK 346
Query: 593 LKGEASLTL--WTYDGIEITLREPLV 616
+ E + + W +G+ + LR+ L+
Sbjct: 347 SEAENPVVVAAWAPEGVAVVLRKALI 372
>gi|227519403|ref|ZP_03949452.1| GTP-binding protein [Enterococcus faecalis TX0104]
gi|424678029|ref|ZP_18114874.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV103]
gi|424679267|ref|ZP_18116094.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV116]
gi|424682894|ref|ZP_18119652.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV129]
gi|424686799|ref|ZP_18123464.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV25]
gi|424692181|ref|ZP_18128694.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV31]
gi|424692416|ref|ZP_18128905.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV37]
gi|424696110|ref|ZP_18132475.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV41]
gi|424699535|ref|ZP_18135748.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV62]
gi|424704721|ref|ZP_18140815.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV63]
gi|424706899|ref|ZP_18142894.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV65]
gi|424717576|ref|ZP_18146858.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV68]
gi|424720418|ref|ZP_18149521.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV72]
gi|424726104|ref|ZP_18154788.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV73]
gi|424734049|ref|ZP_18162599.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV81]
gi|424738078|ref|ZP_18166523.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV85]
gi|424755413|ref|ZP_18183290.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV93]
gi|227073157|gb|EEI11120.1| GTP-binding protein [Enterococcus faecalis TX0104]
gi|402352576|gb|EJU87421.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV103]
gi|402357395|gb|EJU92105.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV116]
gi|402360424|gb|EJU95024.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV31]
gi|402366220|gb|EJV00614.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV129]
gi|402366736|gb|EJV01097.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV25]
gi|402375829|gb|EJV09800.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV62]
gi|402378146|gb|EJV12025.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV37]
gi|402378563|gb|EJV12405.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV41]
gi|402381158|gb|EJV14871.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV63]
gi|402384280|gb|EJV17839.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV68]
gi|402386585|gb|EJV20090.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV65]
gi|402389753|gb|EJV23138.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV73]
gi|402390667|gb|EJV23996.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV81]
gi|402393490|gb|EJV26714.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV72]
gi|402400961|gb|EJV33765.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV93]
gi|402403484|gb|EJV36151.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis ERV85]
Length = 369
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 188/384 (48%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GEV C RC LR+Y N++ + + D DF RL+ G +A
Sbjct: 27 KTAFEKGMETGEV-YCQRCFRLRHY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP +
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKP 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R RA G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 121 KMVQWMRERAHEAGLRPVD-VLLTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S +++LH K
Sbjct: 237 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLNLHRTKT 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD ++ HVG LQPP D +E + V + DI AGLGW ++
Sbjct: 295 ATADAFYEKHVGGLLQPP-RTDEVAEFPELVRFEFSVKEKT------DIVFAGLGWITVT 347
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
G + W G+++ R+ L+
Sbjct: 348 EPG--VVAGWAPKGVDVLRRKALI 369
>gi|257865892|ref|ZP_05645545.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC30]
gi|257872225|ref|ZP_05651878.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC10]
gi|257799826|gb|EEV28878.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC30]
gi|257806389|gb|EEV35211.1| GTP-binding protein YqeH [Enterococcus casseliflavus EC10]
Length = 372
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 186/384 (48%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF RL+ G A
Sbjct: 30 QSALEKGLESGEV-YCQRCFRLRHY----NEIQDVSLTDDDF-----LRLLNEIGEKEA- 78
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L + + +LVG KVD+LP + +
Sbjct: 79 LIVNVVDIFDFNG--------SLIPGLHRFVGNNPV-------LLVGNKVDILPKSLKKS 123
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W++ RA G ++ V L SA+K LL I+ R +V+V+G N GKS
Sbjct: 124 KMTQWMKERAHEAGLRPVD-VLLTSAKKPGETEALLQAIETYREGR-DVYVVGVTNVGKS 181
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K+ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 182 TLINQIIKQTAGINELITTSRFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 239
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K+V KE++P+ Y++ Q + +GGL R D Q E + + +V++H K+
Sbjct: 240 KDLKIVAPAKEIKPKVYQLNPEQTLFLGGLARFDFIQG--ERSSFIAYVANDVAIHRTKL 297
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
ADE ++ HVG LQPP RA E+ + + V DI AGLGW +
Sbjct: 298 TKADEFYEKHVGGLLQPP----RADEVADFPEL---VRFEFSIKEKTDIVFAGLGWIT-- 348
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ + W G+++ R+ LV
Sbjct: 349 ITKPCVIAGWAPKGVDVLKRKALV 372
>gi|422825769|ref|ZP_16873948.1| GTP-binding protein [Streptococcus sanguinis SK678]
gi|324995205|gb|EGC27117.1| GTP-binding protein [Streptococcus sanguinis SK678]
Length = 368
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 188/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V ++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDGKVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K V +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+E A + + HVG L PP+G+++ K + T DI +GLGW
Sbjct: 290 RTKLEGASDFYDKHVGSLLVPPVGKEKEEFPALVKHEFIIKDKT-------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 343 IR--VSGPARVASWAPEGVAVVTRKAII 368
>gi|331701565|ref|YP_004398524.1| ribosome biogenesis GTPase YqeH [Lactobacillus buchneri NRRL
B-30929]
gi|329128908|gb|AEB73461.1| ribosome biogenesis GTPase YqeH [Lactobacillus buchneri NRRL
B-30929]
Length = 378
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 186/376 (49%), Gaps = 40/376 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GEV C RC LR+Y NE+A + D DF +++ S + ++V VVD
Sbjct: 43 ENGEV-YCQRCFRLRHY----NEIAPVSLSDDDFLKLLT------SISDTDSLIVYVVDI 91
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
D +G SL L + + +LVG K+D+LP + ++ W+R
Sbjct: 92 FDVNG--------SLIPGLHRFVGNNPV-------LLVGNKLDILPKALKHNKVKDWLRQ 136
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
+A A G ++ V L+SA+ + + LL I++ + +V+V+G N GKSTLIN+ +
Sbjct: 137 QANAAGIRPID-VELISAKTNFDIDRLLDQIEKYRQGK-DVYVVGVTNVGKSTLINSIVR 194
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL RI L L DTPG++ P M+ L+ E +V
Sbjct: 195 QSTGIKELITTSRFPGTTLD--RIDIPLNDGHNLVDTPGIIQPEQMAHHLSGKELNLVTP 252
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+K ++P+ Y++ GQ + GG+ R D + + TV+A N+ +H K+ENADE +
Sbjct: 253 QKTIKPKGYQLNPGQTLFFGGVARFDYNSGEKRHGF-TVYAENNLFIHRTKLENADEFYA 311
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
HVG L PP +D+ ++ + K + S D+ GLGW + + S+T
Sbjct: 312 THVGSFLTPPT-EDQKADFPALEPHAFKSTEKS------DLVIEGLGWVT--VPEGVSVT 362
Query: 601 LWTYDGIEITLREPLV 616
W G+ + +R ++
Sbjct: 363 GWAPKGVSVLMRPAMI 378
>gi|294615006|ref|ZP_06694895.1| nitric-oxide synthase [Enterococcus faecium E1636]
gi|291592137|gb|EFF23757.1| nitric-oxide synthase [Enterococcus faecium E1636]
Length = 340
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 163/318 (51%), Gaps = 32/318 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E GEV C RC LR+Y NE+ + + D DF RL+ G +A
Sbjct: 27 QTALEKGLASGEV-YCQRCFRLRHY----NEIQDVSLTDDDF-----LRLLNELGQKDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP + T
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKVDILPKSLKKT 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L +W++ RA G ++ V L SA+K + LL I+E R +V+++G N GKS
Sbjct: 121 KLTQWMKERAYEAGIRPVD-VLLTSAKKSHEMTELLEKIEEYRDGR-DVYIVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIKNTAGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ +++ KE++P+ Y++ GQ + +GGL R D + + + S +V++H K+
Sbjct: 237 KDLRIIAPLKEIKPKVYQLNEGQTLFLGGLARFDFISGNRASF--IAYVSNDVNIHRTKL 294
Query: 533 ENADEIWKNHVGIRLQPP 550
E ADE ++ HVG LQPP
Sbjct: 295 EKADEFYQKHVGGLLQPP 312
>gi|404413570|ref|YP_006699157.1| GTPase [Listeria monocytogenes SLCC7179]
gi|404239269|emb|CBY60670.1| putative GTPase [Listeria monocytogenes SLCC7179]
Length = 366
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 186/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G LL I EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLAATD-VVLVSAEKGHGFDTLLEKIDELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E A+ ++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKAEALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ G+ LQPP +E G KL V + DI +GLGW ++ +G A +
Sbjct: 298 EKQAGLVLQPP------TEEGMKTLPKL-VPYSFTVKEKADIVFSGLGWVTIP-EGGAKV 349
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 350 TAWVPEGVSATIRTSLV 366
>gi|418018489|ref|ZP_12658045.1| putative GTPase YqeH [Streptococcus salivarius M18]
gi|345527338|gb|EGX30649.1| putative GTPase YqeH [Streptococcus salivarius M18]
Length = 372
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 196/401 (48%), Gaps = 47/401 (11%)
Query: 219 ERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVI 278
E +K + A KKA E GE+ C RC LR+Y NE+ + I D +F
Sbjct: 16 EDKEKAGYTPASSIKKAEET----GEL-YCQRCFRLRHY----NEIVDVHITDDEF---- 62
Query: 279 ATRLMKPSGNANAGVVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVL 337
+L+ G+++A +VV VVD DF+G + P + D ++L
Sbjct: 63 -LKLLHEVGDSDA-LVVNVVDIFDFNGSIIPG------LLRFVSGND----------VLL 104
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
VG K D+LP V ++ +W+ RA G ++ V L SA+ ++ L+ I++L
Sbjct: 105 VGNKKDILPKSVKDGKVTQWLTERAHEEGMRPVD-VMLTSAQNHHAIKELIQRIEKLRKG 163
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
R +V+V+G N GKSTLIN K+ +T + PGTTL + I L ++DT
Sbjct: 164 R-DVYVVGVTNVGKSTLINAIIKEITGDKDIITTSRFPGTTLDKIEIP--LDDGTYIFDT 220
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PG++H H M+ L+ + K V +KE++P+TY++ GQ + +GGL R D + +
Sbjct: 221 PGIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQTLFLGGLGRFDFIDGNKQGF-- 278
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
T + N+ LH K+E AD + HVG L PP +D A + + V +
Sbjct: 279 TAFFDNNLKLHRTKLEGADAFYDKHVGSLLMPPRPKDLA-DFPKLVRHEFTVKDKT---- 333
Query: 578 GIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
DI +GLGW + K + + W +G+ + +R+ ++
Sbjct: 334 --DIVFSGLGWIRVQGKADQPTIVAAWAPEGVGVVVRKAII 372
>gi|415885594|ref|ZP_11547522.1| GTP-binding protein YqeH [Bacillus methanolicus MGA3]
gi|387591263|gb|EIJ83582.1| GTP-binding protein YqeH [Bacillus methanolicus MGA3]
Length = 368
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 185/373 (49%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NEV + + D DF +++ G ++A ++V +VD DF
Sbjct: 34 EQVICQRCFRLKHY----NEVQDVNLTDDDF-----LKILNEIGKSDA-LIVKIVDIFDF 83
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L + K++LVG KVDLLP V +L W++ A+
Sbjct: 84 NG--------SWLPGLHRFAGNN-------KILLVGNKVDLLPKSVKHNKLIHWMKQEAR 128
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+LVSA K ++ A I E + +V+V+G N GKST IN K+
Sbjct: 129 ELGL-KPEEVFLVSAAKGHFIKETAAAIDEYRQGK-DVYVVGCTNVGKSTFINRMIKEVT 186
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL I++I L L DTPG+++ H M+ +++ + K++ +KE
Sbjct: 187 GEGDLITTSHFPGTTLDIIKIP--LDDGKFLMDTPGIINHHQMAHYVDKRDLKIITPKKE 244
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P+ Y++ GQ + GGL R D + T + S + +H K+E A E++ NHV
Sbjct: 245 IKPKVYQLNEGQTLFFGGLARFDYLTGGRRSF--TCYLSNELIVHRTKLEKASELYNNHV 302
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP R +L ++ KL DI +GLGW + G A + +
Sbjct: 303 GEMLSPP----RKEQLDSFP--KLVRHEFMIKEGKTDIVFSGLGWVTANEPG-AKVAAYV 355
Query: 604 YDGIEITLREPLV 616
G+ + LR+ L+
Sbjct: 356 PKGVHVMLRKSLI 368
>gi|255971788|ref|ZP_05422374.1| nitric-oxide synthase [Enterococcus faecalis T1]
gi|255974786|ref|ZP_05425372.1| nitric-oxide synthase [Enterococcus faecalis T2]
gi|256958094|ref|ZP_05562265.1| nitric-oxide synthase [Enterococcus faecalis DS5]
gi|256960940|ref|ZP_05565111.1| nitric-oxide synthase [Enterococcus faecalis Merz96]
gi|256963921|ref|ZP_05568092.1| nitric-oxide synthase [Enterococcus faecalis HIP11704]
gi|257079982|ref|ZP_05574343.1| nitric-oxide synthase [Enterococcus faecalis JH1]
gi|257081574|ref|ZP_05575935.1| nitric-oxide synthase [Enterococcus faecalis E1Sol]
gi|257084223|ref|ZP_05578584.1| nitric-oxide synthase [Enterococcus faecalis Fly1]
gi|257091097|ref|ZP_05585458.1| nitric-oxide synthase [Enterococcus faecalis CH188]
gi|257417044|ref|ZP_05594038.1| nitric-oxide synthase [Enterococcus faecalis ARO1/DG]
gi|257420198|ref|ZP_05597192.1| nitric-oxide synthase [Enterococcus faecalis T11]
gi|255962806|gb|EET95282.1| nitric-oxide synthase [Enterococcus faecalis T1]
gi|255967658|gb|EET98280.1| nitric-oxide synthase [Enterococcus faecalis T2]
gi|256948590|gb|EEU65222.1| nitric-oxide synthase [Enterococcus faecalis DS5]
gi|256951436|gb|EEU68068.1| nitric-oxide synthase [Enterococcus faecalis Merz96]
gi|256954417|gb|EEU71049.1| nitric-oxide synthase [Enterococcus faecalis HIP11704]
gi|256988012|gb|EEU75314.1| nitric-oxide synthase [Enterococcus faecalis JH1]
gi|256989604|gb|EEU76906.1| nitric-oxide synthase [Enterococcus faecalis E1Sol]
gi|256992253|gb|EEU79555.1| nitric-oxide synthase [Enterococcus faecalis Fly1]
gi|256999909|gb|EEU86429.1| nitric-oxide synthase [Enterococcus faecalis CH188]
gi|257158872|gb|EEU88832.1| nitric-oxide synthase [Enterococcus faecalis ARO1/DG]
gi|257162026|gb|EEU91986.1| nitric-oxide synthase [Enterococcus faecalis T11]
Length = 375
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 191/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GEV C RC LR+Y N++ + + D DF RL+ G +A
Sbjct: 33 KTAFEKGMETGEV-YCQRCFRLRHY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 81
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP +
Sbjct: 82 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKP 126
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R RA G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 127 KMVQWMRERAHEAGLRPVD-VLLTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKS 184
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 185 TLINQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 242
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S +++LH K
Sbjct: 243 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLNLHRTKT 300
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
AD ++ HVG LQPP RA E+ + + + + V DI AGLGW ++
Sbjct: 301 ATADAFYEKHVGGLLQPP----RADEVAEFPE----LVRFEFSVKEKTDIVFAGLGWITV 352
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
G + W G+++ R+ L+
Sbjct: 353 TEPG--VVAGWAPKGVDVLRRKALI 375
>gi|229549019|ref|ZP_04437744.1| GTP-binding protein [Enterococcus faecalis ATCC 29200]
gi|257421576|ref|ZP_05598566.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|293382471|ref|ZP_06628406.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis R712]
gi|293387145|ref|ZP_06631706.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis S613]
gi|294779514|ref|ZP_06744909.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis PC1.1]
gi|300860377|ref|ZP_07106464.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TUSoD Ef11]
gi|307268318|ref|ZP_07549699.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4248]
gi|307272112|ref|ZP_07553375.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0855]
gi|307276172|ref|ZP_07557303.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2134]
gi|307280576|ref|ZP_07561624.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0860]
gi|307289801|ref|ZP_07569737.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0411]
gi|312901412|ref|ZP_07760689.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0470]
gi|312904375|ref|ZP_07763536.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0635]
gi|312906526|ref|ZP_07765528.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis DAPTO 512]
gi|312910471|ref|ZP_07769317.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis DAPTO 516]
gi|312951126|ref|ZP_07770031.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0102]
gi|384514140|ref|YP_005709233.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis OG1RF]
gi|384519605|ref|YP_005706910.1| GTPase [Enterococcus faecalis 62]
gi|397701049|ref|YP_006538837.1| GTPase [Enterococcus faecalis D32]
gi|421512806|ref|ZP_15959601.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Enterococcus faecalis ATCC 29212]
gi|422690220|ref|ZP_16748278.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0630]
gi|422691066|ref|ZP_16749105.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0031]
gi|422693689|ref|ZP_16751697.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4244]
gi|422697540|ref|ZP_16755476.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1346]
gi|422706087|ref|ZP_16763792.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0043]
gi|422709128|ref|ZP_16766641.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0027]
gi|422726077|ref|ZP_16782532.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0312]
gi|422731150|ref|ZP_16787525.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0645]
gi|422734052|ref|ZP_16790349.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1341]
gi|424757360|ref|ZP_18185109.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis R508]
gi|428767963|ref|YP_007154074.1| GTP-binding protein YqeH [Enterococcus faecalis str. Symbioflor 1]
gi|430359132|ref|ZP_19425748.1| nitric-oxide synthase [Enterococcus faecalis OG1X]
gi|430370883|ref|ZP_19429290.1| nitric-oxide synthase [Enterococcus faecalis M7]
gi|229305812|gb|EEN71808.1| GTP-binding protein [Enterococcus faecalis ATCC 29200]
gi|257163400|gb|EEU93360.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|291080155|gb|EFE17519.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis R712]
gi|291083416|gb|EFE20379.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis S613]
gi|294453393|gb|EFG21800.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis PC1.1]
gi|300849416|gb|EFK77166.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TUSoD Ef11]
gi|306499135|gb|EFM68614.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0411]
gi|306503942|gb|EFM73159.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0860]
gi|306507166|gb|EFM76305.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX2134]
gi|306511228|gb|EFM80235.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0855]
gi|306515344|gb|EFM83878.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4248]
gi|310627469|gb|EFQ10752.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis DAPTO 512]
gi|310630902|gb|EFQ14185.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0102]
gi|310632274|gb|EFQ15557.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0635]
gi|311289243|gb|EFQ67799.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis DAPTO 516]
gi|311291488|gb|EFQ70044.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0470]
gi|315036287|gb|EFT48219.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0027]
gi|315148844|gb|EFT92860.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4244]
gi|315154134|gb|EFT98150.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0031]
gi|315156471|gb|EFU00488.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0043]
gi|315159003|gb|EFU03020.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0312]
gi|315162818|gb|EFU06835.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0645]
gi|315169160|gb|EFU13177.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1341]
gi|315173920|gb|EFU17937.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1346]
gi|315576864|gb|EFU89055.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0630]
gi|323481738|gb|ADX81177.1| GTPase of unknown function family protein [Enterococcus faecalis
62]
gi|327536029|gb|AEA94863.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis OG1RF]
gi|397337688|gb|AFO45360.1| GTPase of unknown function family protein [Enterococcus faecalis
D32]
gi|401674071|gb|EJS80434.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Enterococcus faecalis ATCC 29212]
gi|402407202|gb|EJV39737.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis R508]
gi|427186136|emb|CCO73360.1| GTP-binding protein YqeH [Enterococcus faecalis str. Symbioflor 1]
gi|429513487|gb|ELA03068.1| nitric-oxide synthase [Enterococcus faecalis OG1X]
gi|429515248|gb|ELA04766.1| nitric-oxide synthase [Enterococcus faecalis M7]
Length = 369
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 188/384 (48%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GEV C RC LR+Y N++ + + D DF RL+ G +A
Sbjct: 27 KTAFEKGMETGEV-YCQRCFRLRHY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP +
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKP 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R RA G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 121 KMVQWMRERAHEAGLRPVD-VLLTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S +++LH K
Sbjct: 237 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLNLHRTKT 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD ++ HVG LQPP D +E + V + DI AGLGW ++
Sbjct: 295 ATADAFYEKHVGGLLQPPRA-DEVAEFPELVRFEFSVKEKT------DIVFAGLGWITVT 347
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
G + W G+++ R+ L+
Sbjct: 348 EPG--VVAGWAPKGVDVLRRKALI 369
>gi|229086906|ref|ZP_04219065.1| hypothetical protein bcere0022_34800 [Bacillus cereus Rock3-44]
gi|228696416|gb|EEL49242.1| hypothetical protein bcere0022_34800 [Bacillus cereus Rock3-44]
Length = 368
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 185/378 (48%), Gaps = 47/378 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKNY----NEIQDVSLTDDDF-----LRILNGIGQSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L + K+ +LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NG--------SWLPGLHRFVGNNKV-------LLVGNKSDLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K G++L+SA K G+R L I++ + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEGIFLISAAKGQGIRELAEAIEQYRDGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L K+ LYDTPG+++ H M+ + + K++ K
Sbjct: 186 EETENVITTSHFPGTTLDLIDIP--LDEKSSLYDTPGIINHHQMAHYVGKQSLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GGL R D T S + +H K+E ADE+++ H
Sbjct: 244 EIKPMVFQLNEEQTLFFGGLARFDYISGGRRAF--TCHFSNRLPIHRTKLEKADELYEKH 301
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN----GIDIAAAGLGWFSLGLKGEAS 598
G L PP ++ + G K ++ N D+ +GLGW ++ G A
Sbjct: 302 AGELLNPPTPEEIENMPGLVK----------YEFNIREPKTDVVFSGLGWVTVNESG-AK 350
Query: 599 LTLWTYDGIEITLREPLV 616
+ G+ ++LR+ L+
Sbjct: 351 IVAHVPKGVSVSLRKSLI 368
>gi|259047030|ref|ZP_05737431.1| ribosome biogenesis protein GTPase YqeH [Granulicatella adiacens
ATCC 49175]
gi|259036349|gb|EEW37604.1| ribosome biogenesis protein GTPase YqeH [Granulicatella adiacens
ATCC 49175]
Length = 375
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 173/369 (46%), Gaps = 40/369 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LRNY NE+ + D DF ++++ S +VV VVD D G
Sbjct: 47 CQRCFRLRNY----NELQPASLTDDDFLKMLS------SIADEDALVVFVVDLFDLYG-- 94
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
S+ L+ D + + V KVDL P V+ RL W+ AK G
Sbjct: 95 ------SMISGLKRFVGDNPI-------LFVANKVDLYPKSVNRNRLKAWIERHAKEYGI 141
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
++ + LVS K + + LL I E + + +V+G N GKSTLIN + G
Sbjct: 142 KPVDTL-LVSGHKRIQIDELLEKINEYRKGK-DAYVVGVTNVGKSTLINKLIQSIGETGE 199
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTLG + I + L DTPG++H H ++ L E K V +KELQP+
Sbjct: 200 VITTSQYPGTTLGQIDIP--FDEHSSLVDTPGIIHRHQITHYLAEKEMKKVLPQKELQPK 257
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
T+++ Q + +GGL+R+D +Q + T + + LH K+E A E + H G L
Sbjct: 258 TFQLNSEQTIFIGGLIRVDYEQGERNSF--TFYTPQTIDLHRTKLEKATEFYAKHAGTLL 315
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
PP G + K V T D+ AGLGW ++ G ++++W+ +
Sbjct: 316 TPPTGDN-------MKLYPKLVKKTFTIKEKTDLVIAGLGWVTIQKPG--TVSVWSPKEV 366
Query: 608 EITLREPLV 616
++ R+ ++
Sbjct: 367 DVIQRQSII 375
>gi|329770262|ref|ZP_08261651.1| ribosome biogenesis GTPase YqeH [Gemella sanguinis M325]
gi|328836966|gb|EGF86612.1| ribosome biogenesis GTPase YqeH [Gemella sanguinis M325]
Length = 372
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 190/379 (50%), Gaps = 36/379 (9%)
Query: 238 AQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMV 297
+K + VC RC L+NY NEV++ + DF ++I + K + ++ V
Sbjct: 30 VEKSEDSQLVCKRCFRLKNY----NEVSDVELGADDFYQLIKSLSKKDA------LIAKV 79
Query: 298 VDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
VD DF G + +E+ D +K + VL+ K+DLLP V ++ +W
Sbjct: 80 VDIFDFSGSW-----------IEDVVDIVGNNKDI---VLIANKLDLLPKSVKQNKIKQW 125
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
+ K G K+ + LVSA K+ GV + +L + +V++IGA N GKST IN
Sbjct: 126 LFKVLKEKGI-KVKDILLVSAIKNQGVEEAAVRLDQLRNGK-DVYIIGATNVGKSTFINK 183
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
+ + +T + PGTTLG++ I L +YDTPG++ + ++ L+ K+
Sbjct: 184 LIELTSGDKNVITTSHFPGTTLGMIEIP--LDRATSIYDTPGIILDYDIAHYLDAKSLKL 241
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
V +KE++ R +++ Q++ GG+ R+D + ++ T++AS V +H K+ NAD
Sbjct: 242 VMPKKEIKARIFQLNAEQSLFFGGMARMDFVKGERQSF--TLYASNLVEIHRTKLSNADA 299
Query: 538 IWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEA 597
+++ H+G L+PP +D S G + K+ D DI +GLGW ++
Sbjct: 300 LFEKHLGQMLKPPF-EDNISIFGKQVRKSFKI-----DNRKTDIVISGLGWITVNSDSGC 353
Query: 598 SLTLWTYDGIEITLREPLV 616
+ + + IE+ +RE ++
Sbjct: 354 KIDILVPEEIEVFVRESII 372
>gi|443631866|ref|ZP_21116046.1| hypothetical protein BSI_11170 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347981|gb|ELS62038.1| hypothetical protein BSI_11170 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 366
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 190/380 (50%), Gaps = 52/380 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ G ++ +VV +VD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDF-----LNILHGIGETDS-LVVKIVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L+ +L P ++LVG K D+LP + RL +W++ AK
Sbjct: 82 NG--------SWINGLQ------RLVGGNP-ILLVGNKADILPKSLKRERLIQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+LVSA + G++ ++ I+ + +V+V+G N GKST IN K+
Sbjct: 127 ELGLKPVD-VFLVSAGRGQGIKEVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL + I L + LYDTPG+++ H M+ +N+ + K++ +KE
Sbjct: 185 GEEDIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINHHQMAHYVNKKDLKILSPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S E + + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNDQQTLYFGGLARFDY--VSGERSPFICYMPNELMIHRTKLENADALYEKHA 300
Query: 544 GIRLQPPIGQDRASELG-------TWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
G L PP G+D E T KD+K DI +GLGW ++ +
Sbjct: 301 GELLTPP-GKDEMDEFPELVAHTFTIKDKK------------TDIVFSGLGWVTVH-DAD 346
Query: 597 ASLTLWTYDGIEITLREPLV 616
+T + G+ + +R L+
Sbjct: 347 KKVTAYAPKGVHVFVRRSLI 366
>gi|419778100|ref|ZP_14304002.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK10]
gi|383187853|gb|EIC80297.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK10]
Length = 368
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 190/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P+++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPSKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN+ ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINSIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|422758292|ref|ZP_16812054.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322411127|gb|EFY02035.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 372
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 186/371 (50%), Gaps = 40/371 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+ + I D +F RL+ GN++A +VV V+D DF+G
Sbjct: 40 CQRCFRLRHY----NEITDVHITDDEF-----LRLLHEVGNSDA-LVVNVIDIFDFNGSI 89
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
++ + + +D ++LVG K D+LP V ++ +W+ RA G
Sbjct: 90 IPGLSRFI------SGND---------VLLVGNKKDILPKSVKNGKVTQWLTERAHEEGL 134
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ V L SA+ +++L+ I EL R +V+V+G N GKSTLIN ++
Sbjct: 135 RPLD-VMLTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLINAIIQEITGDKD 192
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL + I L + ++DTPG++H H M+ L+ E K+V +KE++P+
Sbjct: 193 VITTSRFPGTTLDKIEIP--LDDGSFIFDTPGIIHRHQMAHYLSPKELKIVSPKKEIKPK 250
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ Q + +GGL R D + T + + LH K+ AD + HVG L
Sbjct: 251 TYQLNPEQTLFLGGLARFDFINGERQGF--TAFFDNQLELHRTKLAGADAFYDKHVGTLL 308
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL-GLK-GEASLTLWTYD 605
PP G+ + L + + +DI +GLGW + G K +A + W +
Sbjct: 309 TPP-GKKELTALPKLVRHEFTID------QKMDIVFSGLGWIRVNGQKDSKAIVAAWAPE 361
Query: 606 GIEITLREPLV 616
G+ + +R+ ++
Sbjct: 362 GVAVIVRKAII 372
>gi|386053744|ref|YP_005971302.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes Finland
1998]
gi|346646395|gb|AEO39020.1| ribosome biogenesis GTPase YqeH [Listeria monocytogenes Finland
1998]
Length = 366
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 186/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G LL I EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLAATD-VVLVSAEKGHGFDTLLEKIDELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E A+ ++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKAEALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ G+ LQPP +E G KL V + DI +GLGW ++ +G A +
Sbjct: 298 EKQAGLVLQPP------TEEGMKTLPKL-VPYSFTVKEKADIVFSGLGWVTIP-EGGAKV 349
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 350 TAWVPEGVSATIRTSLV 366
>gi|319939798|ref|ZP_08014154.1| GTP-binding protein [Streptococcus anginosus 1_2_62CV]
gi|319811011|gb|EFW07326.1| GTP-binding protein [Streptococcus anginosus 1_2_62CV]
Length = 368
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 187/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + + D DF RL+ G++NA
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEITDVQLTDDDF-----LRLLHEVGDSNA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV VVD DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNG---------------------SIIPGLPRFVVGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V +++ +W+ RA G ++ V L SA+ ++ L+ I+ R +V+V+G
Sbjct: 114 KSVKTSKVAQWLTERAHEEGLRPVD-VVLTSAQNKQAIKELIEKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDKEVITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L+ K + +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLSAKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGDKQGF--TAYFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+ A E ++ HVG L PP + ++ +LK+ + D+ +GL
Sbjct: 288 LHRTKLARAGEFYEKHVGSLLTPP-SKKEVADFPKLVKHELKIEAKT------DVVFSGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + W +G+ + R+ ++
Sbjct: 341 GW--IRVIGPAKIAAWAPEGVAVVTRKAII 368
>gi|29377339|ref|NP_816493.1| GTP-binding protein YqeH [Enterococcus faecalis V583]
gi|227554296|ref|ZP_03984343.1| GTP-binding protein [Enterococcus faecalis HH22]
gi|422712679|ref|ZP_16769442.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0309A]
gi|422716477|ref|ZP_16773181.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0309B]
gi|29344806|gb|AAO82563.1| GTPase of unknown function [Enterococcus faecalis V583]
gi|227176586|gb|EEI57558.1| GTP-binding protein [Enterococcus faecalis HH22]
gi|315575232|gb|EFU87423.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0309B]
gi|315582408|gb|EFU94599.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0309A]
Length = 369
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 190/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GEV C RC LR+Y N++ + + D DF RL+ G +A
Sbjct: 27 KTAFEKGMETGEV-YCQRCFRLRHY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP +
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKP 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R RA G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 121 KMVQWMRERAHEAGLRPVD-VLLTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S ++ LH K
Sbjct: 237 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLKLHRTKT 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
AD ++ HVG LQPP RA E+ + + + + V DI AGLGW ++
Sbjct: 295 ATADAFYEKHVGGLLQPP----RADEVAEFPE----LVRFEFSVKEKTDIVFAGLGWITV 346
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
G + W G+++ R+ L+
Sbjct: 347 TEPG--VVAGWAPKGVDVLRRKALI 369
>gi|449883956|ref|ZP_21785426.1| GTP-binding protein YqeH [Streptococcus mutans SA38]
gi|449249416|gb|EMC47546.1| GTP-binding protein YqeH [Streptococcus mutans SA38]
Length = 368
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 190/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRT- 74
Query: 293 VVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV V+D DF+G + P ++ + D L+LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNGSVIPG------LQRFISSND----------LLLVGNKADILPKSVKS 118
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GK
Sbjct: 119 GKITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGK 176
Query: 412 STLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
STLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 177 STLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLS 234
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K
Sbjct: 235 DKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTK 292
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 293 LAGADTFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--I 343
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 344 RINGRAKIAAWAPEGVAVVTRKALI 368
>gi|422699648|ref|ZP_16757511.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1342]
gi|315171886|gb|EFU15903.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1342]
Length = 369
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 191/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GEV C RC LR+Y N++ + + D DF RL+ G +A
Sbjct: 27 KTAFEKGMETGEV-YCQRCFRLRHY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP +
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKP 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R RA G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 121 KMVQWMRERAHEAGLRPVD-VLLTSGKKPEEMQELLDTIEKYREGR-DVYVVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S +++LH K
Sbjct: 237 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLNLHRTKT 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDV-NGIDIAAAGLGWFSL 591
AD ++ HVG LQPP RA E+ + + + + V DI AGLGW ++
Sbjct: 295 ATADAFYEKHVGGLLQPP----RADEVAEFPE----LVRFEFSVKEKTDIVFAGLGWITV 346
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
G + W G+++ R+ L+
Sbjct: 347 TEPG--VVAGWAPKGVDVLRRKALI 369
>gi|256763435|ref|ZP_05504015.1| nitric-oxide synthase [Enterococcus faecalis T3]
gi|256684686|gb|EEU24381.1| nitric-oxide synthase [Enterococcus faecalis T3]
Length = 375
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 191/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GE+ C RC LR+Y N++ + + D DF RL+ G +A
Sbjct: 33 KTAFEKGMETGEI-YCQRCFRLRHY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 81
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP +
Sbjct: 82 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKP 126
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R RA G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 127 KMVQWMRERAHEAGLRPVD-VLLTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKS 184
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 185 TLINQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 242
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S +++LH K
Sbjct: 243 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLNLHRTKT 300
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
AD ++ HVG LQPP RA E+ + + + + V DI AGLGW ++
Sbjct: 301 ATADAFYEKHVGGLLQPP----RADEVAEFPE----LVRFEFSVKEKTDIVFAGLGWITV 352
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
G + W G+++ R+ L+
Sbjct: 353 TEPG--VVAGWAPKGVDVLRRKALI 375
>gi|450052101|ref|ZP_21841149.1| GTP-binding protein YqeH [Streptococcus mutans NFSM1]
gi|449201224|gb|EMC02230.1| GTP-binding protein YqeH [Streptococcus mutans NFSM1]
Length = 368
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 189/377 (50%), Gaps = 43/377 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E G++ C RC LR+Y NE+ + I D DF +L+ G++ A +VV V+D
Sbjct: 34 ESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA-LVVNVIDI 82
Query: 301 VDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DF+G + P ++ + D L+LVG K D+LP V ++ +W+
Sbjct: 83 FDFNGSVIPG------LQRFISSND----------LLLVGNKADILPKSVKSGKITQWLI 126
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKSTLIN
Sbjct: 127 ERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAII 184
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
++ + +T + PGTTL + I L + ++DTPG++H H M+ L+ K +
Sbjct: 185 QEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSDKALKYIS 242
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P+TY++ Q + +GGL R D + T + N+ LH K+ AD +
Sbjct: 243 PKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKLAGADAFY 300
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
H+G L PP ++ A+ + + + D+ +GLGW + + G A +
Sbjct: 301 DKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IRINGRAKI 351
Query: 600 TLWTYDGIEITLREPLV 616
+W +G+ + R+ L+
Sbjct: 352 AVWAPEGVAVVTRKSLI 368
>gi|406587446|ref|ZP_11062332.1| GTPase YqeH [Streptococcus sp. GMD1S]
gi|419814222|ref|ZP_14339020.1| GTPase YqeH [Streptococcus sp. GMD2S]
gi|419816835|ref|ZP_14341007.1| GTPase YqeH [Streptococcus sp. GMD4S]
gi|404466599|gb|EKA11917.1| GTPase YqeH [Streptococcus sp. GMD4S]
gi|404472084|gb|EKA16530.1| GTPase YqeH [Streptococcus sp. GMD2S]
gi|404473066|gb|EKA17431.1| GTPase YqeH [Streptococcus sp. GMD1S]
Length = 368
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 190/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P+++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPSKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN+ ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINSIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|342164515|ref|YP_004769154.1| GTPase YqeH [Streptococcus pseudopneumoniae IS7493]
gi|341934397|gb|AEL11294.1| GTPase YqeH [Streptococcus pseudopneumoniae IS7493]
Length = 368
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 189/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + HVG L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASAFYDKHVGTLLTPPNSKEKEDFPKLIEHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + +R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVIRKAII 368
>gi|313890885|ref|ZP_07824509.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudoporcinus SPIN
20026]
gi|416852866|ref|ZP_11910011.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudoporcinus LQ
940-04]
gi|313120783|gb|EFR43898.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudoporcinus SPIN
20026]
gi|356740355|gb|EHI65587.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudoporcinus LQ
940-04]
Length = 371
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 191/378 (50%), Gaps = 42/378 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+++ + D DF +L+ G ++A +VV VVD
Sbjct: 34 ETGEL-YCQRCFRLRHY----NEISDVQMSDDDF-----LKLLHEVGESDA-LVVNVVDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G ++ + A +D ++LVG K D+LP +++++W+
Sbjct: 83 FDFNGSVIPGLSRFV------AGND---------VLLVGNKKDILPKSTKDSKVNQWLLE 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G ++ V L SA+ + +++L+A I +L R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGLRPID-VMLTSAQNNYAIKDLIASIDKLRRGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ + +T + PGTTL + I L ++DTPG++H H M+ L+ K +
Sbjct: 186 EISGNKNIITTSRFPGTTLDKIEIP--LEDGTYIFDTPGIIHRHQMAHYLSAKNLKYISP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ GQ + + GL R D + T + N++LH K+E AD +
Sbjct: 244 KKEIKPKTYQLNPGQTLFLAGLGRFDFISGLKQGF--TAYFDNNLTLHRTKLEGADAFYH 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H G L PP ++R D +S + + +D+ +GLGW + E +
Sbjct: 302 KHRGSLLTPPDNENR--------DFPELISYEFFIDSKMDLVFSGLGWICINGSKENPVK 353
Query: 601 L--WTYDGIEITLREPLV 616
+ W G+ + R+ ++
Sbjct: 354 IAGWAPKGVAVVTRKAII 371
>gi|295113743|emb|CBL32380.1| ribosome biogenesis GTPase YqeH [Enterococcus sp. 7L76]
Length = 369
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 188/384 (48%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GE+ C RC LR+Y N++ + + D DF RL+ G +A
Sbjct: 27 KTAFEKGMETGEI-YCQRCFRLRHY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP +
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKP 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R RA G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 121 KMVQWMRERAHEAGLRPVD-VLLTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S +++LH K
Sbjct: 237 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLNLHRTKT 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD ++ HVG LQPP D +E + V + DI AGLGW ++
Sbjct: 295 ATADAFYEKHVGGLLQPPRA-DEVAEFPELVRFEFSVKEKT------DIVFAGLGWITVT 347
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
G + W G+++ R+ L+
Sbjct: 348 EPG--VVAGWAPKGVDVLRRKALI 369
>gi|116511050|ref|YP_808266.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris SK11]
gi|116106704|gb|ABJ71844.1| Predicted GTPase [Lactococcus lactis subsp. cremoris SK11]
Length = 401
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 204/430 (47%), Gaps = 58/430 (13%)
Query: 188 AKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTV 247
AK ED++ L GF PAG + +++ ER + + + + +A K E
Sbjct: 28 AKIQTEDKNAL---GFLPAGA----LKKKIAERDQMEAVQAGDEGSEAFV----KNEDLY 76
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG-M 306
C RC LR+Y NE+A + D DF RL+K G NA ++V VVD DF+G +
Sbjct: 77 CQRCFRLRHY----NEIAPTSLTDADF-----LRLLKEIGQHNA-LIVNVVDIFDFNGSL 126
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
P KL D L++V K D+LP + ++ W+R +A + G
Sbjct: 127 IPN------LHKLTGGND----------LLMVANKRDVLPKSLKVGKMTAWLREQAASRG 170
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
K + + SA+ V L+ I+ R +V+V+G N GKSTLIN K
Sbjct: 171 L-KPKDILVTSAQNKDDVAELMEAIEHYRRGR-DVYVVGVTNVGKSTLINAIIKSASGSE 228
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+T + PGTTL + I L + L DTPG++H M+ L ++ K V RKE++P
Sbjct: 229 DVITTSRFPGTTLDKIEIP--LDEDSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEIKP 286
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
+TY++ Q + GGL R D S E +T + +++H K+E A E ++ H G
Sbjct: 287 KTYQLNPEQTLFFGGLARFDF--ISGERQGMTAYFDNEINVHRTKLEGATEFYEKHKGEL 344
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L P + + R+ K++ S DI +GLGW + K A + W +G
Sbjct: 345 LAPALVGAKLVR------REFKITDKS------DIVFSGLGWVRVPQK--AVVAAWVPEG 390
Query: 607 IEITLREPLV 616
+++ +R+ L+
Sbjct: 391 VDVVVRKALI 400
>gi|418068958|ref|ZP_12706238.1| GTPase YqeH [Pediococcus acidilactici MA18/5M]
gi|357537691|gb|EHJ21714.1| GTPase YqeH [Pediococcus acidilactici MA18/5M]
Length = 369
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 185/377 (49%), Gaps = 44/377 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E G++ C RC LR+Y NE+A I D DF ++++ + + +VV VVD
Sbjct: 36 ESGQL-YCQRCFRLRHY----NEIAPVSISDDDFRKLLS------QISDSDSLVVYVVDM 84
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G SL L D + +LVG K D+ P + R+ W+R
Sbjct: 85 FDFNG--------SLIPGLHRFVGDNPV-------LLVGNKADVFPKSIKRHRMREWLRQ 129
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF-A 419
+AKA G ++ V + SA++ V L I++L R +V+V+G N GKSTLIN+ A
Sbjct: 130 QAKANGIEPVD-VMITSAKQRPAVEQLFDKIEQLRDGR-DVYVVGVTNVGKSTLINSLIA 187
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
+ G+K +T + PGTTL RI +K+ DTPG++H M+ L ++ K +
Sbjct: 188 LRNGIK-DVITTSRFPGTTLD--RIEIPFDDHSKMIDTPGIVHNDQMAHVLTAEDLKYIS 244
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+K ++PR Y++ Q + G L R D + + T VT + N+ +H K+ NAD +
Sbjct: 245 PKKTIKPRVYQLGDEQTLFAGALARFDYENS---TGSVTAYFDNNLMIHRTKLANADHFY 301
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ H G L PP ++ A+ L K+ S D+ GLGW + + + +
Sbjct: 302 EKHAGELLTPPAAENLAN-LPELARHHFKIEEDS------DVVFEGLGW--IAVPAGSVV 352
Query: 600 TLWTYDGIEITLREPLV 616
T W GI + +R L+
Sbjct: 353 TAWAPKGISVVIRWALI 369
>gi|422867666|ref|ZP_16914236.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1467]
gi|329577181|gb|EGG58651.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX1467]
Length = 375
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 191/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GEV C RC LR+Y N++ + + D DF RL+ G +A
Sbjct: 33 KTAFEKGMETGEV-YCQRCFRLRHY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 81
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP +
Sbjct: 82 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKP 126
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R RA G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 127 KMVQWMRERAHEAGLRPVD-VLLTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKS 184
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TL+N ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 185 TLVNQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 242
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S +++LH K
Sbjct: 243 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLNLHRTKT 300
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
AD ++ HVG LQPP RA E+ + + + + V DI AGLGW ++
Sbjct: 301 ATADAFYEKHVGGLLQPP----RADEVAEFPE----LVRFEFSVKEKTDIVFAGLGWITV 352
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
G + W G+++ R+ L+
Sbjct: 353 TEPG--VVAGWAPKGVDVLRRKALI 375
>gi|22537804|ref|NP_688655.1| GTP-binding protein YqeH [Streptococcus agalactiae 2603V/R]
gi|76786933|ref|YP_330278.1| GTP-binding protein YqeH [Streptococcus agalactiae A909]
gi|77406588|ref|ZP_00783636.1| GTP-binding protein [Streptococcus agalactiae H36B]
gi|406710043|ref|YP_006764769.1| GTP-binding protein YqeH [Streptococcus agalactiae GD201008-001]
gi|424048892|ref|ZP_17786443.1| GTPase YqeH [Streptococcus agalactiae ZQ0910]
gi|22534697|gb|AAN00528.1|AE014267_11 GTP-binding protein [Streptococcus agalactiae 2603V/R]
gi|76561990|gb|ABA44574.1| GTP-binding protein [Streptococcus agalactiae A909]
gi|77174813|gb|EAO77634.1| GTP-binding protein [Streptococcus agalactiae H36B]
gi|389649661|gb|EIM71137.1| GTPase YqeH [Streptococcus agalactiae ZQ0910]
gi|406650928|gb|AFS46329.1| GTP-binding protein YqeH [Streptococcus agalactiae GD201008-001]
Length = 372
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 193/386 (50%), Gaps = 41/386 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + I D +F +L+ G+++A
Sbjct: 26 RAALEKGLETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G ++ + A +D ++LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNGSIIPGLSRFV------AGND---------VLLVGNKKDILPKSVKDG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G ++ V L SA+ +++L+ I++ + +V+V+G N GKS
Sbjct: 120 KVTQWLTERAHEEGLRPVD-VILTSAQNHHAIKDLIDTIEKYRHGQ-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L + ++DTPG++H H M+ L
Sbjct: 178 TLINAIIREITGSRDVITTSRFPGTTLDKIEIP--LDDGSYIFDTPGIIHRHQMAHYLTA 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K V +KE++P+TY++ Q + + GL R D + T + N++LH K+
Sbjct: 236 KNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGF--TAYFDNNLNLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
ADE + HVG L PP G++ S+ + + + +DI +GLGW +
Sbjct: 294 VGADEFYTKHVGKLLTPPTGKE-VSDFPKLVRHEFTIK------DKMDIVYSGLGWIRVK 346
Query: 593 LKGEASLTL--WTYDGIEITLREPLV 616
+ E + + W +G+ + LR+ L+
Sbjct: 347 SEAENPVVVAAWAPEGVAVVLRKALI 372
>gi|347548874|ref|YP_004855202.1| hypothetical protein LIV_1447 [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346981945|emb|CBW85930.1| Putative unknown protein [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 366
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 186/377 (49%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGNN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA + G LL I+EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLSATD-VVLVSAERGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+ AD ++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLGKADALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ G+ LQPP +E G KL V T DI +GLGW ++ +G A +
Sbjct: 298 EKQAGLVLQPP------TEEGMKTLPKL-VPYTFNVKEKADIVFSGLGWVTIP-EGGAKI 349
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 350 TAWVPEGVSATIRTSLV 366
>gi|312867215|ref|ZP_07727425.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis F0405]
gi|419799139|ref|ZP_14324507.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis F0449]
gi|311097344|gb|EFQ55578.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis F0405]
gi|385698679|gb|EIG29026.1| ribosome biogenesis GTPase YqeH [Streptococcus parasanguinis F0449]
Length = 368
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 190/394 (48%), Gaps = 61/394 (15%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVHLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G N
Sbjct: 116 VKDSKVTHWLMERAHEEGMRPVD-VVLTSAQNKSAIKDLMEKIEQYRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L K V +KE++P+TY++ Q + +GGL R D + + T + + LH
Sbjct: 232 YLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIKGEKQGF--TAFFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGIDIA 582
K+E A + HVG L PP +++ S T KD+ D+
Sbjct: 290 RTKLEGATAFYNKHVGGLLTPPNSKEKEEFPPLVSHEFTIKDKT-------------DLV 336
Query: 583 AAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+GLGW + + GEA + +W +G+ + R+ ++
Sbjct: 337 ISGLGW--IRVNGEAKVAVWAPEGVAVVTRKAII 368
>gi|306834207|ref|ZP_07467327.1| ribosome biogenesis GTPase YqeH [Streptococcus bovis ATCC 700338]
gi|304423780|gb|EFM26926.1| ribosome biogenesis GTPase YqeH [Streptococcus bovis ATCC 700338]
Length = 372
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 193/393 (49%), Gaps = 55/393 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GE+ C RC LR+Y NE+ + I D +F +L+ G+++A
Sbjct: 26 KAALEKGLESGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV VVD DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V +++ +W+ RA G ++ V L SA+ +++L+ I++L R +V+V+G
Sbjct: 114 KSVKDSKVTQWLTERAHEEGLRPVD-VILTSAQNHQAIKDLIEKIEKLRRGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN K+ + +T + PGTTL + I L + ++DTPG++H H M
Sbjct: 172 TNVGKSTLINAIIKEITGEKDIITTSRFPGTTLDKIEIP--LDDGSYIFDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K + +KE++P+TY++ Q + + GL R D + T + N+
Sbjct: 230 AHYLGDKNLKYISPKKEIKPKTYQLNPEQTLFLAGLGRFDFISGDKQGF--TAYFDNNLK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNG-IDIAAAG 585
LH K+ AD + HVG L PPI + EL + K+ + + +D+ +G
Sbjct: 288 LHRTKLAGADAFYDKHVGSLLTPPIDK----ELADFP----KLVRHEFTIKAKMDVVYSG 339
Query: 586 LGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
LGW + ++S+ + W +G+ + LR+ L+
Sbjct: 340 LGWIRIKASQDSSVKIAAWAPEGVAVLLRKALI 372
>gi|339634961|ref|YP_004726602.1| GTPase YqeH [Weissella koreensis KACC 15510]
gi|338854757|gb|AEJ23923.1| GTPase YqeH [Weissella koreensis KACC 15510]
Length = 380
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 181/377 (48%), Gaps = 42/377 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GEV +C RC LR+Y NE+ + D DF R++ + +VV V+D
Sbjct: 45 ENGEV-LCQRCFRLRHY----NEIQPVDLTDDDFRRLLD------QISTTDSLVVYVMDV 93
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF G SL L + P L LVG KVD+LP + ++ W+R
Sbjct: 94 FDFSG--------SLIPGLH------RFVGSNPVL-LVGNKVDILPHALRRAKIKEWMRQ 138
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
+A G ++ + L S + V LL I++ R +V+V+G N GKSTLIN K
Sbjct: 139 QANRAGLRPID-IALTSGKNGDDVPALLDMIEKYRAGR-SVYVVGVTNVGKSTLINQIIK 196
Query: 421 K-EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
G K +T + PGTTL + I L ++ + DTPG++HP M+ L + K V
Sbjct: 197 DVTGEKNDVITTSRFPGTTLDRIEIS--LDDQSNIIDTPGIIHPDQMAHYLTPQDLKYVS 254
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KEL+PRTY++ Q + +G + R D Q I T + N+ +H K++NAD+ +
Sbjct: 255 PQKELKPRTYQLNAEQTLFMGAMARFDFIQGPKSGI--TAYFENNLPIHRTKLDNADQFY 312
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
H G+ L PP + +L K + K + + DI GLGW + + G+ +
Sbjct: 313 AKHAGVLLTPP-EKVNLEDLPPLKRHEFKTTEKT------DIVIDGLGWVT--VPGQVVV 363
Query: 600 TLWTYDGIEITLREPLV 616
W G+ + R+ ++
Sbjct: 364 AAWAPKGVSVLTRKAMI 380
>gi|357639081|ref|ZP_09136954.1| ribosome biogenesis GTPase YqeH [Streptococcus urinalis 2285-97]
gi|418417147|ref|ZP_12990345.1| ribosome biogenesis GTPase YqeH [Streptococcus urinalis
FB127-CNA-2]
gi|357587535|gb|EHJ56943.1| ribosome biogenesis GTPase YqeH [Streptococcus urinalis 2285-97]
gi|410873203|gb|EKS21139.1| ribosome biogenesis GTPase YqeH [Streptococcus urinalis
FB127-CNA-2]
Length = 370
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 188/384 (48%), Gaps = 39/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GE+ C RC LR+Y NE+ + I D +F L+ G+++A
Sbjct: 26 KAALEKGMETGEL-YCQRCFRLRHY----NEIVDVNITDDEF-----LTLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV VVD DF+G ++ + + +D ++LVG K D+LP V
Sbjct: 75 LVVNVVDIFDFNGSVIPGLSRFI------SGND---------VLLVGNKKDILPKSVKNQ 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ V L SA+ + ++ L+ I +L R +V+V+G N GKS
Sbjct: 120 KVTQWLTERAHEEGMRPLD-VILTSAQNNEAIKELITKINQLRKGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L + ++DTPG++H H M+ L
Sbjct: 178 TLINAIIQEITGDKDVITTSRFPGTTLDKIEIP--LDDGSFIFDTPGIIHRHQMAHYLGA 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + + GL R D S E T + N+ +H K+
Sbjct: 236 RNLKYISPKKEIKPKTYQLNPEQTLFLAGLARFDF--VSGEKQGFTAYFDNNLKIHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
E A ++ HVG L PP ++ SE + + + DI +GLGW +
Sbjct: 294 EGATAFYEKHVGHLLVPPTDKE-LSEFPKLIRHEFTIHEKT------DIVYSGLGWIRVN 346
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
K + W +G+ + +R+ L+
Sbjct: 347 PKSATVVAAWAPEGVSVIIRKALI 370
>gi|345020328|ref|ZP_08783941.1| GTPase YqeH [Ornithinibacillus scapharcae TW25]
Length = 366
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 185/373 (49%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + I D DF ++++ S G+VV ++D D
Sbjct: 32 ENILCKRCFRLKHY----NEIQDVSIHDDDFLKMVS------SIRDREGLVVHIIDIFDV 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G ++ K L D + +LVG K+DLLP + +L +W+R AK
Sbjct: 82 NG--------TMIKSLPRIVGDNPI-------ILVGNKMDLLPKSTNQNKLVQWLRSSAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K+ V+L+S+ K G+ L + I E +V+++G N GKST IN K+
Sbjct: 127 EIGL-KVQDVFLISSVKGFGIEELTSQI-EYYRENKDVFIVGTTNVGKSTFINRLIKQSI 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTLG + I L A L DTPG+++ ++ ++ + K+V KE
Sbjct: 185 GESDVITTSYFPGTTLGFIEIP--LDDDAALIDTPGIVNQEQIAHYISDKDLKIVTPTKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++PR Y++ Q + GGL RLD + ++ + S + +H K+E ADE+++NHV
Sbjct: 243 IKPRVYQLNPQQTLFFGGLARLDFIKGDRQSF--VCYFSNQLPIHRTKLEKADELYENHV 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP ++ L K+ G DI GLGW ++ + ++ +
Sbjct: 301 GELLSPP-DEESIKLLPEMTSSAFKLQG-----EKTDIVFPGLGWVTV-MGTNTTVVAHS 353
Query: 604 YDGIEITLREPLV 616
+ +++R+ L+
Sbjct: 354 PKEVAVSIRKSLI 366
>gi|407796155|ref|ZP_11143111.1| GTPase YqeH [Salimicrobium sp. MJ3]
gi|407019509|gb|EKE32225.1| GTPase YqeH [Salimicrobium sp. MJ3]
Length = 366
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 188/373 (50%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NEV + D DF M N +VV ++D DF
Sbjct: 32 ETVICKRCFRLKHY----NEVQDVDYDDDDFLE------MLQQINDTDSLVVQLIDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G SL L +L+ P ++L K+DLLP V+ ++++W+R AK
Sbjct: 82 NG--------SLIPGLN------RLTGNNP-VILAANKMDLLPKSVNLNKVEKWLRREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V+L+SA + G+ L I++ R +V+V+G N GKSTLIN +
Sbjct: 127 EAGL-LVEDVHLISASTNQGIDELAKAIEQ-KRSRKDVFVVGTTNVGKSTLINELINRST 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+T + PGTTLG + I L + LYDTPG++ H ++ ++ ++ K++ +KE
Sbjct: 185 GIKDAITTSYFPGTTLGFIDIP--LDDHSSLYDTPGVIQRHQLAHYVSDEDLKLITPQKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ + Y++ Q + GGL R+D + E + S + +H K+E A I +N +
Sbjct: 243 IKAKIYQLNEEQTLFFGGLARMDFVKG--EHSSFVCYLSNRIPIHRTKMEKAGHITENRI 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP ++ S+L WK + ++ DV +GLGW + +GE ++ +
Sbjct: 301 GEMLVPP-DENSLSKLPQWKRQTFRIPEGKHDV-----VISGLGWIMIP-EGEVTVHIHA 353
Query: 604 YDGIEITLREPLV 616
+G++I+LRE L+
Sbjct: 354 PEGVKISLRESLI 366
>gi|227510525|ref|ZP_03940574.1| GTP-binding protein [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227190177|gb|EEI70244.1| GTP-binding protein [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 378
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 204/422 (48%), Gaps = 46/422 (10%)
Query: 195 EDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSL 254
E+++ +DG +G G V+ + K L K A E + GEV C RC L
Sbjct: 3 ENEVLVDGEVVHCIGCG----AKVQTTNKDALGYT--PKSALEKGLQNGEV-YCQRCFRL 55
Query: 255 RNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKS 314
R+Y NE+A + D DF +++ S + ++V VVD D +G S
Sbjct: 56 RHY----NEIAPVSLSDDDFLKLLT------SISGTDSLIVYVVDIFDVNG--------S 97
Query: 315 LFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVY 374
L L D + +LVG K+D+LP+ + ++ W+R RA A G ++ V
Sbjct: 98 LIPGLHRFVGDNPV-------LLVGNKLDVLPASIKERKVRDWLRQRANAAGIRPID-VE 149
Query: 375 LVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPI 434
L+SA+ + V +LL I++ + +V+V+G N GKSTLIN ++ +T +
Sbjct: 150 LISAKTNFDVDHLLDQIEKYRDGK-DVYVVGVTNVGKSTLINAVIRQSTGIKELITTSRF 208
Query: 435 PGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGG 494
PGTTL RI L + DTPG++ P M+ L E +V +K ++P+ Y++
Sbjct: 209 PGTTLD--RIDIPLNDGHSIVDTPGIIQPEQMAHHLVGKELNLVTPQKTIKPKIYQLNPE 266
Query: 495 QAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQD 554
Q + GG+ R D D + + TV+A N+ +H K+ENA+ ++ H+G L PP ++
Sbjct: 267 QTLFFGGVARFDYDSGDGKHGF-TVYAENNLYIHRTKLENAEAFYEKHLGDLLSPP-SEN 324
Query: 555 RASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREP 614
R + + + K S S D+ GLGW + + + ++ W G+ + +R
Sbjct: 325 RKDDFPPLERHEFKTSQKS------DVVIEGLGWVT--VPSDVVVSGWAPKGVSVLIRPA 376
Query: 615 LV 616
++
Sbjct: 377 MI 378
>gi|90961476|ref|YP_535392.1| GTP-binding protein YqeH [Lactobacillus salivarius UCC118]
gi|301300328|ref|ZP_07206533.1| ribosome biogenesis GTPase YqeH [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|385840205|ref|YP_005863529.1| GTP-binding protein [Lactobacillus salivarius CECT 5713]
gi|90820670|gb|ABD99309.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|300214326|gb|ADJ78742.1| GTP-binding protein [Lactobacillus salivarius CECT 5713]
gi|300852064|gb|EFK79743.1| ribosome biogenesis GTPase YqeH [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 373
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 180/371 (48%), Gaps = 44/371 (11%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+A+ + D DF RL+ G +++ ++V VVD DF+G
Sbjct: 45 CQRCFRLRHY----NEIADVSLTDDDF-----LRLLNQIGESDS-LIVNVVDIFDFNG-- 92
Query: 308 PKRAAKSLFKKLEE--AKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
S+ L K+D ++LVG K DLLP + +R+ W+R A
Sbjct: 93 ------SVIPGLHRFVGKND---------VLLVGNKSDLLPKSLKRSRIKDWLRQEANKQ 137
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G ++ V L SA K + NLL I + R +V+V+G N GKSTLIN K++
Sbjct: 138 GLRPID-VALTSASKGYEIDNLLELIDKYRKGR-DVYVVGVTNVGKSTLINRIIKQQTGI 195
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
+T + PGTTL + I L DTPG++H M+ L K +KE++
Sbjct: 196 SELITTSRFPGTTLDKIEIP--FDDGKNLIDTPGIIHKQQMAHYLTGKSLKFASPQKEIK 253
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P+ Y++ GQ + +G L R D + V + N+ LH K++NAD+ ++ H G
Sbjct: 254 PKVYQLNEGQTIFLGSLARFDYISGGRTS--VIAYFDNNLPLHRTKLQNADKFYEKHAGE 311
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
LQPP ++ ++ + KVS S D+ +GLGW SL + W +
Sbjct: 312 LLQPPT-REELKKMPKLTRFEFKVSEKS------DLVFSGLGWISLS--PNTIVAGWAPE 362
Query: 606 GIEITLREPLV 616
G+ + +R+ ++
Sbjct: 363 GVGVLIRKAMI 373
>gi|256847505|ref|ZP_05552951.1| ribosome biogenesis GTPase YqeH [Lactobacillus coleohominis
101-4-CHN]
gi|256716169|gb|EEU31144.1| ribosome biogenesis GTPase YqeH [Lactobacillus coleohominis
101-4-CHN]
Length = 375
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 174/355 (49%), Gaps = 42/355 (11%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+A + D DF +L+ ANA ++V VVD DF+G
Sbjct: 47 CQRCFRLRHY----NEIAPVSLTDDDF-----LQLLNHIREANA-LIVYVVDIFDFNG-- 94
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
SL L + + +LVG K DLLP + T+L W+R +A G
Sbjct: 95 ------SLIPGLHRFVGNNPV-------LLVGNKEDLLPHSLRRTKLRDWIRQQANVAGI 141
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK-KEGVKV 426
++ + LVSA+K+ + LL I++ R +V+V+G N GKSTLIN K + GVK
Sbjct: 142 RPIDTL-LVSAKKNHQIEELLNTIEKYRQHR-DVYVVGVTNVGKSTLINQIIKQRTGVK- 198
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+T + PGTTL + I L +L DTPG++H H M+ L + K+V +KE++P
Sbjct: 199 DLITTSRFPGTTLDKIEIP--LDDGQELIDTPGIIHQHQMAHVLPAQDLKLVAPQKEIKP 256
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
RTY++ GQ + +GG+ R D + + V + N+ LH K NAD ++ H+G
Sbjct: 257 RTYQLSDGQTIFMGGIARFDYLKGP--KVGVVAYFDNNLQLHRTKFSNADTFYEKHLGDL 314
Query: 547 LQPPIGQDRAS-------ELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
L PP + E T + L G W IA A GW G++
Sbjct: 315 LTPPTKTTKGQIPSLERFEFSTDEKTDLVYEGLGWITVPAGIAVA--GWAPQGVR 367
>gi|322388976|ref|ZP_08062546.1| GTP-binding protein [Streptococcus parasanguinis ATCC 903]
gi|321144281|gb|EFX39689.1| GTP-binding protein [Streptococcus parasanguinis ATCC 903]
Length = 368
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 190/394 (48%), Gaps = 61/394 (15%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVHLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G N
Sbjct: 116 VKDSKVTHWLMERAHEEGMRPVD-VVLTSAQNKSAIKDLMEKIEQHRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L K V +KE++P+TY++ Q + +GGL R D + + T + + LH
Sbjct: 232 YLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIKGEKQGF--TAFFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGIDIA 582
K+E A + HVG L PP +++ S T KD+ D+
Sbjct: 290 RTKLEGATAFYDKHVGSLLTPPNSKEKEEFPPLVSHEFTIKDKT-------------DLV 336
Query: 583 AAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+GLGW + + GEA + +W +G+ + R+ ++
Sbjct: 337 ISGLGW--IRVNGEAKVAVWAPEGVAVVTRKAII 368
>gi|229544804|ref|ZP_04433529.1| GTP-binding protein [Enterococcus faecalis TX1322]
gi|256854161|ref|ZP_05559526.1| GTP-binding protein YqeH [Enterococcus faecalis T8]
gi|422684471|ref|ZP_16742707.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4000]
gi|229310076|gb|EEN76063.1| GTP-binding protein [Enterococcus faecalis TX1322]
gi|256711104|gb|EEU26147.1| GTP-binding protein YqeH [Enterococcus faecalis T8]
gi|315030785|gb|EFT42717.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX4000]
Length = 369
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 190/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GEV C RC LR Y N++ + + D DF RL+ G +A
Sbjct: 27 KTAFEKGMETGEV-YCQRCFRLRYY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP +
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKP 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R RA G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 121 KMVQWMRERAHEAGLRPVD-VLLTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S +++LH K
Sbjct: 237 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLNLHRTKT 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
AD ++ HVG LQPP RA E+ + + + + V DI AGLGW ++
Sbjct: 295 ATADAFYEKHVGGLLQPP----RADEVAEFPE----LVRFEFSVKEKTDIVFAGLGWITV 346
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
G + W G+++ R+ L+
Sbjct: 347 TEPG--VVAGWAPKGVDVLRRKALI 369
>gi|227513534|ref|ZP_03943583.1| GTP-binding protein [Lactobacillus buchneri ATCC 11577]
gi|227083407|gb|EEI18719.1| GTP-binding protein [Lactobacillus buchneri ATCC 11577]
Length = 378
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 204/422 (48%), Gaps = 46/422 (10%)
Query: 195 EDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSL 254
E+++ +DG +G G V+ + K L K A E + GEV C RC L
Sbjct: 3 ENEVVVDGEVVHCIGCG----AKVQTTNKDALGYT--PKSALEKGLQNGEV-YCQRCFRL 55
Query: 255 RNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKS 314
R+Y NE+A + D DF +++ S + ++V VVD D +G S
Sbjct: 56 RHY----NEIAPVSLSDDDFLKLLT------SISGTDSLIVYVVDIFDVNG--------S 97
Query: 315 LFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVY 374
L L D + +LVG K+D+LP+ + ++ W+R RA + G ++ V
Sbjct: 98 LIPGLHRFVGDNPV-------LLVGNKLDVLPASIKERKVRDWLRQRANSAGIRPID-VE 149
Query: 375 LVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPI 434
L+SA+ + V +LL I++ + +V+V+G N GKSTLIN ++ +T +
Sbjct: 150 LISAKTNFDVDHLLDQIEKYRDGK-DVYVVGVTNVGKSTLINAVIRQSTGIKELITTSRF 208
Query: 435 PGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGG 494
PGTTL RI L + DTPG++ P M+ L E +V +K ++P+ Y++
Sbjct: 209 PGTTLD--RIDIPLNDGHSIVDTPGIIQPEQMAHHLVGKELNLVTPQKTIKPKIYQLNPE 266
Query: 495 QAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQD 554
Q + GG+ R D D + + TV+A N+ +H K+ENA+ ++ H+G L PP ++
Sbjct: 267 QTLFFGGVARFDYDSGDGKHGF-TVYAENNLYIHRTKLENAEAFYEKHLGDLLSPP-SEN 324
Query: 555 RASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREP 614
R + + + K S S D+ GLGW + + + ++ W G+ + +R
Sbjct: 325 RKDDFPPLEHHEFKTSQKS------DVVIEGLGWVT--VPSDVVVSGWAPKGVSVLIRPA 376
Query: 615 LV 616
++
Sbjct: 377 MI 378
>gi|449997466|ref|ZP_21824018.1| GTP-binding protein YqeH [Streptococcus mutans A9]
gi|449181814|gb|EMB83875.1| GTP-binding protein YqeH [Streptococcus mutans A9]
Length = 368
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 188/377 (49%), Gaps = 43/377 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E G++ C RC LR+Y NE+ + I D DF +L+ G++ A +VV V+D
Sbjct: 34 ESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA-LVVNVIDI 82
Query: 301 VDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DF+G + P ++ + D L+LVG K D+LP V ++ +W+
Sbjct: 83 FDFNGSVIPG------LQRFISSND----------LLLVGNKADILPKSVKSGKITQWLM 126
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKSTLIN
Sbjct: 127 ERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAII 184
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
++ + +T + PGTTL + I L + ++DTPG++H H M+ L+ K +
Sbjct: 185 QEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSDKALKYIS 242
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P+TY++ Q + +GGL R D + T + N+ LH K+ AD +
Sbjct: 243 PKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKLAGADAFY 300
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
H+G L PP ++ A+ + + + D+ +GLGW + + G A +
Sbjct: 301 DKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IRINGRAKI 351
Query: 600 TLWTYDGIEITLREPLV 616
W +G+ + R+ L+
Sbjct: 352 AAWAPEGVAVVTRKALI 368
>gi|339639756|ref|ZP_08661200.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 056
str. F0418]
gi|339453025|gb|EGP65640.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 056
str. F0418]
Length = 368
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 190/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV V+D DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDSKVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K V +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYVSPKKEIKPKTYQLHPEQTLFLGGLGRFDFVVGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K++ A + + HVG L PP+G+++ E + + + DI +GLGW
Sbjct: 290 RTKLQGASDFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTLKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 343 IR--VSGPAQVAGWAPEGVAVVTRKAII 368
>gi|421489789|ref|ZP_15937165.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus SK1138]
gi|400374377|gb|EJP27296.1| ribosome biogenesis GTPase YqeH [Streptococcus anginosus SK1138]
Length = 368
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 188/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + + D DF RL+ G++NA
Sbjct: 26 QSALEKGMETGEL-YCQRCFRLRHY----NEITDVQLTDDDF-----LRLLHEVGDSNA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ ++ L+ I++ R +V+V+G N
Sbjct: 116 VKTSKVAQWLTERAHEEGLRPVD-VVLTSAQNKQAIKELIEKIEQYRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H ++
Sbjct: 174 VGKSTLINAIIQEITGDKEIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQIAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K V +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+ A E ++ HVG L PP + ++ +LK+ + D+ +GLGW
Sbjct: 290 RSKLLGAGEFYEKHVGSLLAPP-SKKEVADFPQLVKHELKIETKT------DVVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 343 IR--VTGPAKIVAWAPEGVAVVTRKAII 368
>gi|419781006|ref|ZP_14306838.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK100]
gi|383184398|gb|EIC76912.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK100]
Length = 368
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 188/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ +R ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIREVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNNKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|423071276|ref|ZP_17060051.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius F0413]
gi|355364638|gb|EHG12370.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius F0413]
Length = 368
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 189/393 (48%), Gaps = 59/393 (15%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + + D DF RL+ G++NA
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEITDVQLTDDDF-----LRLLHEVGDSNA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV VVD DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNG---------------------SVIPGLPRFVTGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V +++ +W+ RA G ++ V L SA+ ++ L+ I++ R +V+V+G
Sbjct: 114 KSVKTSKVTQWLTERAHEEGLRPID-VVLTSAQNKQAIKELMEKIEQYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H + M
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LDDGSHIYDTPGIIHRYQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L+ K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLSAKHLKYVSPKKEIKPKTYQLNPKQTLFLGGLGRFDFVSGDKQGF--TAYFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWK---DRKLKVSGTSWDVNGIDIAA 583
LH K+ A E + HVG L PP Q EL T+ +LK+ ID+
Sbjct: 288 LHRTKLAGAGEFYNKHVGSLLTPPSKQ----ELPTFPKLVKHELKIE------TKIDVVF 337
Query: 584 AGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+GLGW + + G A + W +G+ + R+ ++
Sbjct: 338 SGLGW--IRVVGPAQVAAWVPEGVAVVTRKAII 368
>gi|55823525|ref|YP_141966.1| GTP-binding protein YqeH [Streptococcus thermophilus CNRZ1066]
gi|116628312|ref|YP_820931.1| GTP-binding protein YqeH [Streptococcus thermophilus LMD-9]
gi|386087223|ref|YP_006003097.1| Ribosome biogenesis GTPase YqeH [Streptococcus thermophilus ND03]
gi|386345319|ref|YP_006041483.1| hypothetical protein STH8232_1866 [Streptococcus thermophilus JIM
8232]
gi|387910325|ref|YP_006340631.1| GTP-binding protein YqeH [Streptococcus thermophilus MN-ZLW-002]
gi|445382105|ref|ZP_21427172.1| GTPase YqeH [Streptococcus thermophilus MTCC 5460]
gi|445394858|ref|ZP_21428906.1| GTPase YqeH [Streptococcus thermophilus MTCC 5461]
gi|55739510|gb|AAV63151.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
gi|116101589|gb|ABJ66735.1| Predicted GTPase [Streptococcus thermophilus LMD-9]
gi|312278936|gb|ADQ63593.1| Ribosome biogenesis GTPase YqeH [Streptococcus thermophilus ND03]
gi|339278780|emb|CCC20528.1| hypothetical protein STH8232_1866 [Streptococcus thermophilus JIM
8232]
gi|387575260|gb|AFJ83966.1| GTP-binding protein YqeH [Streptococcus thermophilus MN-ZLW-002]
gi|444748731|gb|ELW73685.1| GTPase YqeH [Streptococcus thermophilus MTCC 5461]
gi|444748809|gb|ELW73759.1| GTPase YqeH [Streptococcus thermophilus MTCC 5460]
Length = 372
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 194/401 (48%), Gaps = 47/401 (11%)
Query: 219 ERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVI 278
E +K + A KKA E GE+ C RC LR+Y NE+ + I D +F
Sbjct: 16 EDKEKAGFTPASSIKKAEET----GEL-YCQRCFRLRHY----NEIVDVHITDDEF---- 62
Query: 279 ATRLMKPSGNANAGVVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVL 337
+L+ G+++A +VV VVD DF+G + P + D ++L
Sbjct: 63 -LKLLHEVGDSDA-LVVNVVDIFDFNGSIIPG------LSRFVSGND----------VLL 104
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
VG K D+LP V ++ +W+ RA G ++ V L SA+ ++ L+ I+ L
Sbjct: 105 VGNKKDILPKSVKDGKVTQWLTERAHEEGMRPVD-VMLTSAQNHHAIKELIQRIEALRKG 163
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
R +V+V+G N GKSTLIN K+ +T + PGTTL + I L + ++DT
Sbjct: 164 R-DVYVVGVTNVGKSTLINAIIKEITGDKDVITTSRFPGTTLDKIEIP--LDDGSYIFDT 220
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PG++H H M+ L+ + K V +KE++P+TY++ GQ + +GGL R D +
Sbjct: 221 PGIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQTLFLGGLGRFDFIDGDKQGF-- 278
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
T + N+ LH K++ AD + HVG L PP G ++ + + +
Sbjct: 279 TAFFDNNLKLHRTKLDGADAFYDKHVGSLLMPP-GPKELADFPKLVRHEFTIKDKT---- 333
Query: 578 GIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
D+ +GLGW + K + + W +G+ + +R+ ++
Sbjct: 334 --DVVFSGLGWIRVQGKADQPTIVAAWAPEGVGVVVRKAII 372
>gi|420160958|ref|ZP_14667729.1| GTP-binding protein [Weissella koreensis KCTC 3621]
gi|394745708|gb|EJF34526.1| GTP-binding protein [Weissella koreensis KCTC 3621]
Length = 380
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 181/377 (48%), Gaps = 42/377 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GEV +C RC LR+Y NE+ + D DF R++ + +VV V+D
Sbjct: 45 ENGEV-LCQRCFRLRHY----NEIQPVDLTDDDFRRLLD------QISTTDSLVVYVMDV 93
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF G SL L + P L LVG KVD+LP + ++ W+R
Sbjct: 94 FDFSG--------SLIPGLH------RFVGSNPVL-LVGNKVDILPHALRRAKIKEWMRQ 138
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
+A G ++ + L S + V LL I++ R +V+V+G N GKSTLIN K
Sbjct: 139 QANRAGLRPID-IALTSGKNGDDVPALLDMIEKYRAGR-SVYVVGVTNVGKSTLINQIIK 196
Query: 421 K-EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
G K +T + PGTTL + I L ++ + DTPG++HP M+ L + K V
Sbjct: 197 DVTGEKNDVITTSRFPGTTLDRIEIS--LDDQSNIIDTPGIIHPDQMAHYLTPQDLKYVS 254
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KEL+PRTY++ Q + +G + R D Q I T + N+ +H K++NAD+ +
Sbjct: 255 PQKELKPRTYQLNAEQTLFMGAMARFDFIQGPKSGI--TAYFENNLPIHRTKLDNADQFY 312
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
H G+ L PP + +L K + K + + DI GLGW + + G+ +
Sbjct: 313 VKHAGVLLTPP-EKVNLEDLPPLKRHEFKTTEKT------DIVIDGLGWVT--VPGQVVV 363
Query: 600 TLWTYDGIEITLREPLV 616
W G+ + R+ ++
Sbjct: 364 AAWAPKGVSVLTRKAMI 380
>gi|331266921|ref|YP_004326551.1| GTP-binding protein [Streptococcus oralis Uo5]
gi|326683593|emb|CBZ01211.1| GTP-binding protein [Streptococcus oralis Uo5]
Length = 368
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 187/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ +T + PGTTL + I L A +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQDVITTSRFPGTTLDKIEIP--LDDGAYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASAFYNKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGSAKVAVWAPEGVAVVTRKAII 368
>gi|322516195|ref|ZP_08069128.1| GTP-binding protein [Streptococcus vestibularis ATCC 49124]
gi|322125371|gb|EFX96726.1| GTP-binding protein [Streptococcus vestibularis ATCC 49124]
Length = 372
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 193/401 (48%), Gaps = 47/401 (11%)
Query: 219 ERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVI 278
E +K + A KKA E GE+ C RC LR+Y NE+ + I D +F
Sbjct: 16 EDKEKAGFTPASSIKKAEET----GEL-YCQRCFRLRHY----NEIVDVHITDDEF---- 62
Query: 279 ATRLMKPSGNANAGVVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVL 337
+L+ G+++A +VV VVD DF+G + P + D ++L
Sbjct: 63 -LKLLHEVGDSDA-LVVNVVDIFDFNGSIIPG------LSRFVSGND----------VLL 104
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
VG K D+LP V ++ +W+ RA G ++ V L SA+ ++ L+ I++L
Sbjct: 105 VGNKKDILPKSVKDGKVTQWLTERAHEEGMRPVD-VMLTSAQNHHAIKELIQRIEKLRKG 163
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
R +V+V+G N GKSTLIN K+ +T + PGTTL + I L ++DT
Sbjct: 164 R-DVYVVGVTNVGKSTLINAIIKEITGDKDIITTSRFPGTTLDKIEIP--LDDGTYIFDT 220
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PG++H H M+ L+ + K V +KE++P+TY++ Q + +GGL R D +
Sbjct: 221 PGIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNASQTLFLGGLGRFDFIDGDKQGF-- 278
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
T + N+ LH K+E AD + HVG L PP +D A D V +
Sbjct: 279 TAFFDNNLKLHRTKLEGADAFYDKHVGSLLMPPGPKDLA-------DFPKLVRHEFTIKD 331
Query: 578 GIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
DI +GLGW + K + + W +G+ + +R+ ++
Sbjct: 332 KTDIVFSGLGWIRVQGKADQPTIVAAWAPEGVGVVVRKAII 372
>gi|418965891|ref|ZP_13517649.1| ribosome biogenesis GTPase YqeH [Streptococcus constellatus subsp.
constellatus SK53]
gi|383341525|gb|EID19784.1| ribosome biogenesis GTPase YqeH [Streptococcus constellatus subsp.
constellatus SK53]
Length = 368
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + + D DF RL+ G++NA
Sbjct: 26 QSALEKGTEIGEL-YCQRCFRLRHY----NEITDVQLTDDDF-----LRLLHEVGDSNA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ +W+ RA G ++ V L SA+ ++ L+ I++ R +V+V+G N
Sbjct: 116 VKTSKVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKELIEKIEQYRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LVDGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K V +KE++P+TY++ Q + +GGL R D + + T + + LH
Sbjct: 232 YLSAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGNKQGF--TAYFDNELQLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+ A E ++ HVG L PP + ++ +LK+ + D+ +GLGW
Sbjct: 290 RTKLAGAGEFYEKHVGSLLTPP-SKKEVADFPQLVKHELKIETKT------DVVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ + G A + +W + + + R+ ++
Sbjct: 343 --IRVIGPAQIAVWAPEEVAVVTRKAII 368
>gi|299535723|ref|ZP_07049044.1| GTP-binding protein YqeH [Lysinibacillus fusiformis ZC1]
gi|298728923|gb|EFI69477.1| GTP-binding protein YqeH [Lysinibacillus fusiformis ZC1]
Length = 367
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 178/373 (47%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
+V +C RC L+NY NE+ + D DF R++ G++V +VD DF
Sbjct: 33 DVVICQRCFRLKNY----NEIQPVSLTDDDFLRILNGL------GTQQGLIVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L + K P L L+ K DLLP V P ++ W++ AK
Sbjct: 83 NG--------SWLPGLH------RFVGKNPVL-LIANKADLLPKSVKPKKVINWLKREAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
A G ++ V LVSA K G+ + I E + NV+V+G N GKST IN K+
Sbjct: 128 ALGLQPVD-VLLVSAHKGKGMAEAMEAIDEYRKGQ-NVYVVGCTNVGKSTFINRIIKQAT 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L + LYDTPG+++ H M+ ++ E K + +KE
Sbjct: 186 GEGEVITTSHFPGTTLDMIDIP--LDDGSALYDTPGIINHHQMAHHIDSSELKYIMPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P+ Y+ GQ + +G L R D Q T+ + ++ +H K+E AD +++ H
Sbjct: 244 IKPKVYQQNAGQTLFIGALARFDFIQGDRSAF--TIHVANDLPIHRTKLEKADALYEEHK 301
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP D +L + + DV +GLGW ++ + +
Sbjct: 302 GELLAPPTA-DFIDQLPPLVRHEFSIKEAKTDV-----VFSGLGWITVQ-HANVVVAAYA 354
Query: 604 YDGIEITLREPLV 616
G+++++R L+
Sbjct: 355 PKGVQVSIRPSLI 367
>gi|449988609|ref|ZP_21820627.1| GTP-binding protein YqeH [Streptococcus mutans NVAB]
gi|449183787|gb|EMB85761.1| GTP-binding protein YqeH [Streptococcus mutans NVAB]
Length = 368
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 190/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV V+D DF+G + P ++ + D L+LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNGSVIPG------LQRFISSND----------LLLVGNKADILPKSVKS 118
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
++ +W+ RA G + + L SA+ ++ L+A I+EL R +V+V+G N GK
Sbjct: 119 GKITQWLMERAHEEGLRPFD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGK 176
Query: 412 STLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
STLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 177 STLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLS 234
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K
Sbjct: 235 DKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTK 292
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 293 LAGADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGWIRI 345
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
++ A + W +G+ + R+ L+
Sbjct: 346 NVR--AKIAAWAPEGVAVVTRKALI 368
>gi|424788334|ref|ZP_18215089.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius BA1]
gi|422112837|gb|EKU16599.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius BA1]
Length = 368
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 188/393 (47%), Gaps = 59/393 (15%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + + D DF RL+ G++NA
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEITDVQLTDDDF-----LRLLHEVGDSNA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV VVD DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNG---------------------SIIPGLPRFVAGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ L+ I++ R +V+V+G
Sbjct: 114 KSVKSNKVTQWLTERAHEEGLRPID-VVLTSAQNKQAIKELMEKIEQYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H + M
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRYQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L+ K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLSAKHLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGDKQGF--TAYFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWK---DRKLKVSGTSWDVNGIDIAA 583
LH K+ A E + HVG L PP Q EL T+ +LK+ ID+
Sbjct: 288 LHRTKLAGAGEFYNKHVGSLLTPPSKQ----ELPTFPKLVKHELKIE------TKIDVVF 337
Query: 584 AGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+GLGW + + G A + W +G+ + R+ ++
Sbjct: 338 SGLGW--IRVVGPAQVAAWVPEGVAVVTRKAII 368
>gi|422852211|ref|ZP_16898881.1| GTP-binding protein [Streptococcus sanguinis SK150]
gi|325693537|gb|EGD35456.1| GTP-binding protein [Streptococcus sanguinis SK150]
Length = 368
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 191/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV VVD DF+G + + A +D ++LVG K D+LP V +
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFI------AGND---------VLLVGNKKDILPKSVKDS 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N GKS
Sbjct: 120 KVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEHCRKGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L + +YDTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAHYLSA 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + + LH K+
Sbjct: 236 KNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+ A + HVG L PP+G+++ E + + + +DI +GLGW
Sbjct: 294 QGASGFYDKHVGSLLVPPVGKEK-EEFPALVKHEFTIK------DKMDIVFSGLGWIR-- 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 345 VSGPARVAGWAPEGVAVVTRKAII 368
>gi|227890565|ref|ZP_04008370.1| GTP-binding protein [Lactobacillus salivarius ATCC 11741]
gi|417810594|ref|ZP_12457273.1| GTP-binding protein [Lactobacillus salivarius GJ-24]
gi|227867503|gb|EEJ74924.1| GTP-binding protein [Lactobacillus salivarius ATCC 11741]
gi|335349390|gb|EGM50890.1| GTP-binding protein [Lactobacillus salivarius GJ-24]
Length = 373
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 180/371 (48%), Gaps = 44/371 (11%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+A+ + D DF RL+ G +++ ++V VVD DF+G
Sbjct: 45 CQRCFRLRHY----NEIADVSLTDDDF-----LRLLNQIGESDS-LIVNVVDIFDFNG-- 92
Query: 308 PKRAAKSLFKKLEE--AKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
S+ L K+D ++LVG K DLLP + +R+ W+R A
Sbjct: 93 ------SVIPGLHRFVGKND---------VLLVGNKSDLLPKSLKRSRIKDWLRQEANKQ 137
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G ++ V L SA K + NLL I + R +V+V+G N GKSTLIN K++
Sbjct: 138 GLRPID-VALTSASKGYEIDNLLELIDKYRKGR-DVYVVGVTNVGKSTLINRIIKQQTGI 195
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
+T + PGTTL + I L DTPG++H M+ L K +KE++
Sbjct: 196 SELITTSRFPGTTLDKIEIP--FDDGKNLIDTPGIIHKQQMAHYLTGKSLKFASPQKEIK 253
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P+ Y++ GQ + +G L R D + V + N+ LH K++NAD+ ++ H G
Sbjct: 254 PKVYQLNEGQTIFLGSLARFDYISGGRTS--VIAYFDNNLPLHRTKLQNADKFYEKHAGE 311
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
LQPP ++ ++ + K+S S D+ +GLGW SL + W +
Sbjct: 312 LLQPPT-REELEKMPKLTRFEFKISEKS------DLVFSGLGWISLS--PNTIVAGWAPE 362
Query: 606 GIEITLREPLV 616
G+ + +R+ ++
Sbjct: 363 GVGVLIRKAMI 373
>gi|422727775|ref|ZP_16784205.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0012]
gi|315151732|gb|EFT95748.1| ribosome biogenesis GTPase YqeH [Enterococcus faecalis TX0012]
Length = 369
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 188/384 (48%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GEV C RC LR+Y N++ + + D DF RL+ G +A
Sbjct: 27 KTAFEKGMETGEV-YCQRCFRLRHY----NDIQDVQLTDDDF-----LRLLNGLGTEDA- 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG KVD+LP +
Sbjct: 76 LIVNVVDIFDFNG--------SLIPGLHRFIGDNPV-------LLVGNKVDILPKSLKKP 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+R +A G ++ V L S +K ++ LL I++ R +V+V+G N GKS
Sbjct: 121 KMVQWMREQAHEAGLRPVD-VLLTSGKKPQEMQELLDTIEKYREGR-DVYVVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL + I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIQQTVGVQDVITTSQFPGTTLDKIEIP--LDDGHFLIDTPGIIHRHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K++ +KE++P+ Y++ Q + +GGL R D Q + + + S +++LH K
Sbjct: 237 KDLKIIAPQKEIKPKVYQLNAEQTLFLGGLARFDYVQGAKSSF--IAYVSNDLNLHRTKT 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD ++ HVG LQPP D +E + V + DI AGLGW ++
Sbjct: 295 ATADAFYEKHVGGLLQPPRA-DEVAEFPELVRFEFSVKEKT------DIVFAGLGWITVT 347
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
G + W G+++ R+ L+
Sbjct: 348 EPG--VVAGWAPKGVDVLRRKALI 369
>gi|449908951|ref|ZP_21794064.1| GTP-binding protein YqeH [Streptococcus mutans OMZ175]
gi|449262015|gb|EMC59473.1| GTP-binding protein YqeH [Streptococcus mutans OMZ175]
Length = 368
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 188/377 (49%), Gaps = 43/377 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E G++ C RC LR+Y NE+ + I D DF +L+ G++ A +VV V+D
Sbjct: 34 ESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA-LVVNVIDI 82
Query: 301 VDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DF+G + P ++ + D L+LVG K D+LP V ++ +W+
Sbjct: 83 FDFNGSVIPG------LQRFISSND----------LLLVGNKADILPKSVKSGKITQWLM 126
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKSTLIN
Sbjct: 127 ERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAII 184
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
++ + +T + PGTTL + I L + ++DTPG++H H M+ L+ K +
Sbjct: 185 QEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSDKALKYIS 242
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P+TY++ Q + +GGL R D + T + N+ LH K+ AD +
Sbjct: 243 PKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKLVGADTFY 300
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
H+G L PP ++ A+ + + + D+ +GLGW + + G A +
Sbjct: 301 DKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IRINGRAKI 351
Query: 600 TLWTYDGIEITLREPLV 616
W +G+ + R+ L+
Sbjct: 352 AAWAPEGVAVVTRKSLI 368
>gi|417788024|ref|ZP_12435707.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus salivarius NIAS840]
gi|334308201|gb|EGL99187.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus salivarius NIAS840]
Length = 373
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 180/371 (48%), Gaps = 44/371 (11%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+A+ + D DF RL+ G +++ ++V VVD DF+G
Sbjct: 45 CQRCFRLRHY----NEIADVSLTDDDF-----LRLLNQIGESDS-LIVNVVDIFDFNG-- 92
Query: 308 PKRAAKSLFKKLEE--AKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
S+ L K+D ++LVG K DLLP + +R+ W+R A
Sbjct: 93 ------SVIPGLHRFVGKND---------VLLVGNKSDLLPKSLKRSRIKDWLRQEANKQ 137
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G ++ V L SA K + NLL I + R +V+V+G N GKSTLIN K++
Sbjct: 138 GLRPID-VALTSASKGYEIDNLLELIDKYRKGR-DVYVVGVTNVGKSTLINRIIKQQTGI 195
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
+T + PGTTL + I L DTPG++H M+ L K +KE++
Sbjct: 196 SELITTSRFPGTTLDKIEIP--FDDGKNLIDTPGIIHKQQMAHYLTGKSLKFASPQKEIK 253
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P+ Y++ GQ + +G L R D + V + N+ LH K++NAD+ ++ H G
Sbjct: 254 PKVYQLNEGQTIFLGSLARFDYISGGRTS--VIAYFDNNLPLHRTKLQNADKFYEKHAGE 311
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
LQPP ++ ++ + K+S S D+ +GLGW SL + W +
Sbjct: 312 LLQPPT-REELEKIPKLTRFEFKISEKS------DLVFSGLGWISLS--PNTIVAGWAPE 362
Query: 606 GIEITLREPLV 616
G+ + +R+ ++
Sbjct: 363 GVGVLIRKAMI 373
>gi|450145066|ref|ZP_21874391.1| GTP-binding protein YqeH [Streptococcus mutans 1ID3]
gi|449149787|gb|EMB53574.1| GTP-binding protein YqeH [Streptococcus mutans 1ID3]
Length = 368
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 189/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W + + + R+ L+
Sbjct: 345 INGRAKIAAWAPEEVAVVTRKALI 368
>gi|450175542|ref|ZP_21885246.1| GTP-binding protein YqeH [Streptococcus mutans SM1]
gi|449246628|gb|EMC44927.1| GTP-binding protein YqeH [Streptococcus mutans SM1]
Length = 368
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 189/384 (49%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D DF +L+ G++ A
Sbjct: 26 KSALEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G S+ L+ + L +LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKS
Sbjct: 120 KITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 178 TLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K+
Sbjct: 236 KALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 294 AGADAFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IR 344
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+ G A + W + + + R+ L+
Sbjct: 345 INGRAKIAAWAPERVAVVTRKALI 368
>gi|406027117|ref|YP_006725949.1| GTP-binding protein [Lactobacillus buchneri CD034]
gi|405125606|gb|AFS00367.1| GTP-binding protein [Lactobacillus buchneri CD034]
Length = 378
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 186/376 (49%), Gaps = 40/376 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GEV C RC LR+Y NE+A + D DF +++ S + ++V VVD
Sbjct: 43 ENGEV-YCQRCFRLRHY----NEIAPVSLSDDDFLKLLT------SISDTDSLIVYVVDI 91
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
D +G SL L + P L LVG K+D+LP + ++ W+R
Sbjct: 92 FDVNG--------SLIPGLH------RFVGSNPVL-LVGNKLDILPKALKHNKVKDWLRQ 136
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
+A A G ++ V L+SA+ + + LL I++ + +V+V+G N GKSTLIN+ +
Sbjct: 137 QANAAGIRPID-VELISAKTNFDIDRLLDQIEKYRQGK-DVYVVGVTNVGKSTLINSIVR 194
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL RI L L DTPG++ P M+ L+ E +V
Sbjct: 195 QSTGIKELITTSRFPGTTLD--RIDIPLNDGHNLVDTPGIIQPEQMAHHLSGKELNLVTP 252
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+K ++P+ Y++ GQ + G+ R D + + TV+A N+ +H K+ENADE +
Sbjct: 253 QKTIKPKGYQLNPGQTLFFAGVARFDYNSGDKRHGF-TVYAENNLFIHRTKLENADEFYA 311
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
HVG L PP +D+ ++ + + K + S D+ GLGW + + S+T
Sbjct: 312 THVGSFLTPPT-EDQKADFPALEPHEFKSTEKS------DLVIEGLGWVT--VPEGVSVT 362
Query: 601 LWTYDGIEITLREPLV 616
W G+ + +R ++
Sbjct: 363 GWAPKGVSVLMRPAMI 378
>gi|19745428|ref|NP_606564.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS8232]
gi|71902919|ref|YP_279722.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS6180]
gi|139474400|ref|YP_001129116.1| GTP-binding protein YqeH [Streptococcus pyogenes str. Manfredo]
gi|306827997|ref|ZP_07461264.1| ribosome biogenesis GTPase YqeH [Streptococcus pyogenes ATCC 10782]
gi|386316307|ref|YP_006012471.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|417752128|ref|ZP_12400359.1| ribosome biogenesis GTPase YqeH [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|19747540|gb|AAL97063.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
gi|71802014|gb|AAX71367.1| GTP-binding protein [Streptococcus pyogenes MGAS6180]
gi|134272647|emb|CAM30914.1| GTP-binding protein [Streptococcus pyogenes str. Manfredo]
gi|304429916|gb|EFM32958.1| ribosome biogenesis GTPase YqeH [Streptococcus pyogenes ATCC 10782]
gi|323126594|gb|ADX23891.1| GTP-binding protein YqeH [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333772086|gb|EGL48968.1| ribosome biogenesis GTPase YqeH [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
Length = 372
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 189/378 (50%), Gaps = 41/378 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+ + I D +F RL+ G+++A +VV V+D
Sbjct: 34 ETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LRLLHEVGDSDA-LVVNVIDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G ++ + + +D ++LVG K D+LP V ++ +W+
Sbjct: 83 FDFNGSIIPGLSRFI------SGND---------VLLVGNKKDILPKSVKDGKVTQWLTE 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G L+ V L SA+ +++L+ I EL R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGLRPLD-VMLTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL + I L + ++DTPG++H H M+ L+ E K+V
Sbjct: 186 EITGDKDVITTSRFPGTTLDKIEIP--LDDGSFIFDTPGIIHRHQMAHYLSPKELKIVSP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GGL R D + T + + LH K+ AD +
Sbjct: 244 KKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TAFFDNQLELHRTKLAGADAFYD 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL-GLK-GEAS 598
HVG L PP G+ + + + +DI +GLGW + G K +A
Sbjct: 302 KHVGTLLTPP-GKKELTAFPKLVRHEFTID------QKMDIVFSGLGWIRVNGQKDSKAI 354
Query: 599 LTLWTYDGIEITLREPLV 616
+ W +G+ + +R+ ++
Sbjct: 355 VAAWAPEGVAVIVRKAII 372
>gi|227524677|ref|ZP_03954726.1| GTP-binding protein [Lactobacillus hilgardii ATCC 8290]
gi|227088161|gb|EEI23473.1| GTP-binding protein [Lactobacillus hilgardii ATCC 8290]
Length = 378
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 204/422 (48%), Gaps = 46/422 (10%)
Query: 195 EDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSL 254
E+++ +DG +G G V+ + K L K A E + GEV C RC L
Sbjct: 3 ENEVVVDGEVVHCIGCG----AKVQTTNKDALGYT--PKSALEKGLQNGEV-YCQRCFRL 55
Query: 255 RNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKS 314
R+Y NE+A + D DF +++ S + ++V VVD D +G S
Sbjct: 56 RHY----NEIAPVSLSDDDFLKLLT------SISGTDSLIVYVVDIFDVNG--------S 97
Query: 315 LFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVY 374
L L D + +LVG K+D+LP+ + ++ W+R RA + G ++ V
Sbjct: 98 LIPGLHRFVGDNPV-------LLVGNKLDVLPASIKERKVRDWLRQRANSAGIRPID-VE 149
Query: 375 LVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPI 434
L+SA+ + V +LL I++ + +V+V+G N GKSTLIN ++ +T +
Sbjct: 150 LISAKTNFDVDHLLDQIEKYRDGK-DVYVVGVTNVGKSTLINAVIRQSTGIKELITTSRF 208
Query: 435 PGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGG 494
PGTTL RI L + DTPG++ P M+ L E +V +K ++P+ Y++
Sbjct: 209 PGTTLD--RIDIPLNDGHSIVDTPGIIQPEQMAHHLVGKELNLVTPQKTIKPKIYQLNPE 266
Query: 495 QAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQD 554
Q + GG+ R D D + + TV+A N+ +H K+ENA+ ++ H+G L PP ++
Sbjct: 267 QTLFFGGVARFDYDSGDGKHGF-TVYAENNLYIHRTKLENAEAFYEKHLGDLLSPP-SEN 324
Query: 555 RASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREP 614
R + + + K S S D+ GLGW + + + ++ W G+ + +R
Sbjct: 325 RKDDFPPLERHEFKTSQKS------DVVIEGLGWVT--VPSDVVVSGWAPKGVSVLIRPA 376
Query: 615 LV 616
++
Sbjct: 377 MI 378
>gi|408401050|ref|YP_006859013.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
gi|407967278|dbj|BAM60516.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
Length = 372
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 188/378 (49%), Gaps = 41/378 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+ + I D +F RL+ G+++A +VV V+D
Sbjct: 34 ETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LRLLHEVGDSDA-LVVNVIDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G ++ + + +D ++LVG K D+LP V ++ +W+
Sbjct: 83 FDFNGSIIPGLSRFI------SGND---------VLLVGNKKDILPKSVKDGKVTQWLTE 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G L+ V L SA+ +++L+ I EL R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGLRPLD-VMLTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL + I L ++DTPG++H H M+ L+ E K+V
Sbjct: 186 EITGNKDVITTSRFPGTTLDKIEIP--LDDGTFIFDTPGIIHRHQMAHYLSPKELKIVSP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GGL R D + T + + LH K+ AD +
Sbjct: 244 KKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TAFFDNQLELHRTKLAGADAFYD 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL-GLK-GEAS 598
HVG L PP G+ + + + +DI +GLGW + G K +A
Sbjct: 302 KHVGTLLTPP-GKKELTAFPKLVRHEFTID------QKMDIVFSGLGWIRVNGQKDSKAI 354
Query: 599 LTLWTYDGIEITLREPLV 616
+ W +G+ + +R+ ++
Sbjct: 355 VAAWAPEGVAVIVRKAII 372
>gi|392429164|ref|YP_006470175.1| GTP-binding protein [Streptococcus intermedius JTH08]
gi|419776069|ref|ZP_14301992.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius SK54]
gi|383846277|gb|EID83676.1| ribosome biogenesis GTPase YqeH [Streptococcus intermedius SK54]
gi|391758310|dbj|BAM23927.1| GTP-binding protein [Streptococcus intermedius JTH08]
Length = 368
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 188/393 (47%), Gaps = 59/393 (15%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + + D DF RL+ G++NA
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEITDVQLTDDDF-----LRLLHEVGDSNA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV VVD DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNG---------------------SIIPGLPRFVAGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ L+ I++ R +V+V+G
Sbjct: 114 KSVKSNKVTQWLTERAHEEGLRPID-VVLTSAQNKQAIKELMEKIEQYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H + M
Sbjct: 172 TNVGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LDDGSHIYDTPGIIHRYQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L+ K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLSAKHLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFVSGDKQGF--TAYFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWK---DRKLKVSGTSWDVNGIDIAA 583
LH K+ A E + HVG L PP Q EL T+ +LK+ ID+
Sbjct: 288 LHRTKLAGAGEFYNKHVGSLLTPPSKQ----ELPTFPKLVKHELKIE------TKIDVVF 337
Query: 584 AGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+GLGW + + G A + W +G+ + R+ ++
Sbjct: 338 SGLGW--IRVVGPAQVAAWVPEGVAVVTRKAII 368
>gi|157149789|ref|YP_001449761.1| GTP-binding protein YqeH [Streptococcus gordonii str. Challis
substr. CH1]
gi|157074583|gb|ABV09266.1| GTP-binding protein [Streptococcus gordonii str. Challis substr.
CH1]
Length = 368
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 189/388 (48%), Gaps = 49/388 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+++ + D DF RL+ G+++A
Sbjct: 26 QSALEKGLETGEL-YCQRCFRLRHY----NEISDVQLTDDDF-----LRLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V ++ +W+ RA G ++ V L SA+ +++L+ I+ R +V+V+G N
Sbjct: 116 VKDGKVTQWLTERAHEEGLRPVD-VVLTSAQNKQAIKDLIDKIEHSRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LADGSHIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L+ K + +KE++P+TY++ Q + +GGL R D + T + + LH
Sbjct: 232 YLSAKNLKYISPKKEIKPKTYQLNPEQTLFLGGLGRFDFVAGDKQGF--TAYFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K+E A + + HVG L PP+G+++ E + + + DI +GLGW
Sbjct: 290 RTKLEGASDFYDKHVGGLLVPPVGKEK-EEFPALVKHEFTIKDKT------DIVFSGLGW 342
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ ++
Sbjct: 343 IR--VSGPARVAGWAPEGVAVVTRKAII 368
>gi|421487827|ref|ZP_15935225.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK304]
gi|400369789|gb|EJP22786.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK304]
Length = 368
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 188/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P+++ +W+ A G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPSKISQWLMEHAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + HVG L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASAFYDKHVGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|389853433|ref|YP_006355677.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
NZ9000]
gi|300069855|gb|ADJ59255.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 401
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 205/437 (46%), Gaps = 72/437 (16%)
Query: 188 AKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAER-KKKAREAQKEKGEVT 246
AK ED++ L GF PAG + KKK KAER + +A +A E E
Sbjct: 28 AKIQTEDKNAL---GFLPAG-------------ALKKK--KAERDQMEAVQAGDEGSEAF 69
Query: 247 V------CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
V C RC LR+Y NE+A + D DF RL+K G NA ++V VVD
Sbjct: 70 VKNEDLYCQRCFRLRHY----NEIAPTSLTDADF-----LRLLKEIGQHNA-LIVNVVDI 119
Query: 301 VDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DF+G + P KL D L++V K D+LP + ++ W+R
Sbjct: 120 FDFNGSLIPN------LHKLTGGND----------LLMVANKRDVLPKSLKVGKMTAWLR 163
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
+A + G K + + SA+ V L+ I+ R +V+V+G N GKSTLIN
Sbjct: 164 EQAASRGL-KPKDILITSAQNKDDVAELMEAIEHYRRGR-DVYVVGVTNVGKSTLINAII 221
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K +T + PGTTL + I L + L DTPG++H M+ L ++ K V
Sbjct: 222 KSASGSEDVITTSRFPGTTLDKIEIP--LDEDSALIDTPGIIHRGQMAHYLEPEDLKYVS 279
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
RKE+ P+TY++ Q + GGL R D S E +T + +++H K+E A E +
Sbjct: 280 PRKEINPKTYQLNPEQTLFFGGLARFDF--ISGERQGMTAYFDNEINVHRTKLEGATEFY 337
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ H G L P + + R+ K++ S DI +GLGW + K A +
Sbjct: 338 EKHKGELLAPALVGAKLVR------REFKITDKS------DIVFSGLGWVRVPQK--AVV 383
Query: 600 TLWTYDGIEITLREPLV 616
W +G+++ +R+ L+
Sbjct: 384 AAWVPEGVDVVVRKALI 400
>gi|449963594|ref|ZP_21810888.1| GTP-binding protein YqeH [Streptococcus mutans 15VF2]
gi|449173369|gb|EMB75946.1| GTP-binding protein YqeH [Streptococcus mutans 15VF2]
Length = 368
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 189/385 (49%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K E E G++ C RC LR+Y NE+ + I D DF +L+ G++
Sbjct: 26 KSTLEKGLESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRT- 74
Query: 293 VVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV V+D DF+G + P ++ + D L+LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNGSVIPG------LQRFISSND----------LLLVGNKADILPKSVKS 118
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
++ +W+ RA G L+ + L SA+ ++ L+A I+EL R +V+V+G N GK
Sbjct: 119 GKITQWLMERAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGK 176
Query: 412 STLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
STLIN ++ + +T + PGTTL + I L + ++DTPG++H H M+ L+
Sbjct: 177 STLINAIIQEITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLS 234
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
K + +KE++P+TY++ Q + +GGL R D + T + N+ LH K
Sbjct: 235 DKALKYISPKKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTK 292
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ AD + H+G L PP ++ A+ + + + D+ +GLGW +
Sbjct: 293 LAGADTFYDKHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--I 343
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ G A + W +G+ + R+ L+
Sbjct: 344 RINGRAKIAAWAPEGVAVVTRKALI 368
>gi|418961114|ref|ZP_13513001.1| GTPase YqeH [Lactobacillus salivarius SMXD51]
gi|380344781|gb|EIA33127.1| GTPase YqeH [Lactobacillus salivarius SMXD51]
Length = 373
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 180/371 (48%), Gaps = 44/371 (11%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+A+ + D DF RL+ G +++ ++V VVD DF+G
Sbjct: 45 CQRCFRLRHY----NEIADVSLTDDDF-----LRLLNQIGESDS-LIVNVVDIFDFNG-- 92
Query: 308 PKRAAKSLFKKLEE--AKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
S+ L K+D ++LVG K DLLP + +R+ W+R A
Sbjct: 93 ------SVIPGLHRFVGKND---------VLLVGNKSDLLPKSLKRSRIKDWLRQEANKQ 137
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G ++ V L SA K + NLL I + R +V+V+G N GKSTLIN K++
Sbjct: 138 GLRPVD-VALTSASKGYEIDNLLELIDKYRKGR-DVYVVGVTNVGKSTLINRIIKQQTGI 195
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
+T + PGTTL + I L DTPG++H M+ L K +KE++
Sbjct: 196 SELITTSRFPGTTLDKIEIP--FDDGKNLIDTPGIIHKQQMAHYLTGKSLKFASPQKEIK 253
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P+ Y++ GQ + +G L R D + V + N+ LH K++NAD+ ++ H G
Sbjct: 254 PKVYQLNEGQTIFLGSLARFDYISGGRTS--VIAYFDNNLPLHRTKLQNADKFYEKHAGE 311
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
LQPP ++ ++ + K+S S D+ +GLGW SL + W +
Sbjct: 312 LLQPPT-REELEKMPKLTRFEFKISEKS------DLVFSGLGWISLS--PNTIVAGWAPE 362
Query: 606 GIEITLREPLV 616
G+ + +R+ ++
Sbjct: 363 GVGVLIRKAMI 373
>gi|228993078|ref|ZP_04153001.1| hypothetical protein bpmyx0001_38150 [Bacillus pseudomycoides DSM
12442]
gi|228999128|ref|ZP_04158710.1| hypothetical protein bmyco0003_36850 [Bacillus mycoides Rock3-17]
gi|229006676|ref|ZP_04164310.1| hypothetical protein bmyco0002_35780 [Bacillus mycoides Rock1-4]
gi|228754537|gb|EEM03948.1| hypothetical protein bmyco0002_35780 [Bacillus mycoides Rock1-4]
gi|228760745|gb|EEM09709.1| hypothetical protein bmyco0003_36850 [Bacillus mycoides Rock3-17]
gi|228766726|gb|EEM15366.1| hypothetical protein bpmyx0001_38150 [Bacillus pseudomycoides DSM
12442]
Length = 368
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 184/378 (48%), Gaps = 47/378 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKNY----NEIQDVSLTDDDF-----LRILNGIGQSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L + K+ +LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NG--------SWLPGLHRFVGNNKV-------LLVGNKSDLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+R L I++ G + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIRELAEAIEQYRGGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + LYDTPG+++ H M+ + + K++ K
Sbjct: 186 EETENVITTSHFPGTTLDLIDIP--LDETSSLYDTPGIINHHQMAHYVGKQSLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GGL R D T S + +H K+E ADE+++ H
Sbjct: 244 EIKPMVFQLNEEQTLFFGGLARFDYISGGRRAF--TCHLSNRLPIHRTKLEKADELYEKH 301
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN----GIDIAAAGLGWFSLGLKGEAS 598
G L PP ++ + G K ++ N D+ +GLGW ++ G A
Sbjct: 302 AGELLNPPTPEELENMPGLVK----------YEFNIREPKTDVVFSGLGWVTVNEPG-AK 350
Query: 599 LTLWTYDGIEITLREPLV 616
+ G+ ++LR+ L+
Sbjct: 351 IVAHVPKGVSVSLRKSLI 368
>gi|209558820|ref|YP_002285292.1| GTP-binding protein YqeH [Streptococcus pyogenes NZ131]
gi|209540021|gb|ACI60597.1| GTP-binding protein [Streptococcus pyogenes NZ131]
Length = 373
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 189/378 (50%), Gaps = 40/378 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+ + I D +F RL+ G+++A +VV V+D
Sbjct: 34 ETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LRLLHEVGDSDA-LVVNVIDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G ++ + + +D ++LVG K D+LP V ++ +W+
Sbjct: 83 FDFNGSIIPGLSRFI------SGND---------VLLVGNKKDILPKSVKDGKVTQWLTE 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G + V L SA+ +++L+ I EL R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGRLRPLDVMLTSAQNKYAIKDLIGRINELRNGR-DVYVVGVTNVGKSTLINAIIQ 186
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL + I L ++DTPG++H H M+ L+ E K+V
Sbjct: 187 EITGNKDVITTSRFPGTTLDKIEIP--LDDGTFIFDTPGIIHRHQMAHYLSPKELKIVSP 244
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GGL R D + T + + LH K+ AD +
Sbjct: 245 KKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TAFFDNQLELHRTKLAGADAFYD 302
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL-GLK-GEAS 598
HVG L PP EL + KL + D +DI +GLGW + G K +A
Sbjct: 303 KHVGTLLTPP----DKKELTAFP--KLVRHEFTID-QKMDIVFSGLGWIRVNGQKDSKAI 355
Query: 599 LTLWTYDGIEITLREPLV 616
+ W +G+ + +R+ ++
Sbjct: 356 VAAWAPEGVAVIVRKAII 373
>gi|410494094|ref|YP_006903940.1| GTP-binding protein engA [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417927491|ref|ZP_12570879.1| ribosome biogenesis GTPase YqeH [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340765365|gb|EGR87891.1| ribosome biogenesis GTPase YqeH [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|410439254|emb|CCI61882.1| GTP-binding protein engA [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 372
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 189/378 (50%), Gaps = 41/378 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+ + I D +F RL+ G+++A +VV V+D
Sbjct: 34 ETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LRLLHEVGDSDA-LVVNVIDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G ++ + + +D ++LVG K D+LP V ++ +W+
Sbjct: 83 FDFNGSIIPGLSRFI------SGND---------VLLVGNKKDILPKSVKDGKVTQWLTE 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G L+ V L SA+ +++L+ I EL R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGLRPLD-VMLTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL + I L + ++DTPG++H H M+ L+ E K+V
Sbjct: 186 EITGDKDVITTSRFPGTTLYKIEIP--LDDGSFIFDTPGIIHRHQMAHYLSPKELKIVSP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GGL R D + T + + LH K+ AD +
Sbjct: 244 KKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TAFFDNQLELHRTKLAGADAFYD 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL-GLK-GEAS 598
HVG L PP G+ + + + +DI +GLGW + G K +A
Sbjct: 302 KHVGTLLTPP-GKKELTAFPKLVRHEFTID------QKMDIVFSGLGWIRVNGQKDSKAI 354
Query: 599 LTLWTYDGIEITLREPLV 616
+ W +G+ + +R+ ++
Sbjct: 355 VAAWAPEGVAVIVRKAII 372
>gi|322388318|ref|ZP_08061922.1| GTP-binding protein [Streptococcus infantis ATCC 700779]
gi|419842394|ref|ZP_14365742.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis ATCC
700779]
gi|321140990|gb|EFX36491.1| GTP-binding protein [Streptococcus infantis ATCC 700779]
gi|385703871|gb|EIG40973.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis ATCC
700779]
Length = 368
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 187/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G +L V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGL-RLVDVVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGSAKVAVWAPEGVAVVTRKAII 368
>gi|15674473|ref|NP_268647.1| GTP-binding protein YqeH [Streptococcus pyogenes SF370]
gi|21909760|ref|NP_664028.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS315]
gi|28896548|ref|NP_802898.1| GTP-binding protein YqeH [Streptococcus pyogenes SSI-1]
gi|71910075|ref|YP_281625.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS5005]
gi|386362126|ref|YP_006071457.1| hypothetical protein SPYALAB49_000294 [Streptococcus pyogenes
Alab49]
gi|410679949|ref|YP_006932351.1| ribosome biogenesis GTPase YqeH [Streptococcus pyogenes A20]
gi|421891703|ref|ZP_16322471.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Streptococcus pyogenes NS88.2]
gi|13621572|gb|AAK33368.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|21903945|gb|AAM78831.1| putative GTP-binding protein [Streptococcus pyogenes MGAS315]
gi|28811802|dbj|BAC64731.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
gi|71852857|gb|AAZ50880.1| GTP-binding protein [Streptococcus pyogenes MGAS5005]
gi|350276535|gb|AEQ23903.1| hypothetical protein SPYALAB49_000294 [Streptococcus pyogenes
Alab49]
gi|379982527|emb|CCG26193.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Streptococcus pyogenes NS88.2]
gi|395453320|dbj|BAM29659.1| GTP-binding protein [Streptococcus pyogenes M1 476]
gi|409692538|gb|AFV37398.1| ribosome biogenesis GTPase YqeH [Streptococcus pyogenes A20]
Length = 372
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 190/378 (50%), Gaps = 41/378 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+ + I D +F RL+ G+++A +VV V+D
Sbjct: 34 ETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LRLLHEVGDSDA-LVVNVIDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G ++ + + +D ++LVG K D+LP V ++ +W+
Sbjct: 83 FDFNGSIIPGLSRFI------SGND---------VLLVGNKKDILPKSVKDGKVTQWLTE 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G L+ V L SA+ +++L+ I EL R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGLRPLD-VMLTSAQNKYAIKDLIGRINELRNGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL + I L ++DTPG++H H M+ L+ E K+V
Sbjct: 186 EITGNKDVITTSRFPGTTLDKIEIP--LDDGTFIFDTPGIIHRHQMAHYLSPKELKIVSP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GGL R D + T + + LH K+ AD +
Sbjct: 244 KKEIKPKTYQLNPEQTLFLGGLARFDFINGERQGF--TAFFDNQLELHRTKLAGADAFYD 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL-GLK-GEAS 598
HVG L PP EL + KL + D +DI +GLGW + G K +A
Sbjct: 302 KHVGTLLTPP----DKKELTAFP--KLVRHEFTID-QKMDIVFSGLGWIRVNGQKDSKAI 354
Query: 599 LTLWTYDGIEITLREPLV 616
+ W +G+ + +R+ ++
Sbjct: 355 VAAWAPEGVAVIVRKAII 372
>gi|386759166|ref|YP_006232382.1| hypothetical protein MY9_2593 [Bacillus sp. JS]
gi|384932448|gb|AFI29126.1| hypothetical protein MY9_2593 [Bacillus sp. JS]
Length = 366
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 190/380 (50%), Gaps = 52/380 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ G ++ +VV +VD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDF-----LNILHGIGETDS-LVVKIVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L+ +L P ++LVG K D+LP + RL +W++ AK
Sbjct: 82 NG--------SWINGLQ------RLVGGNP-ILLVGNKADILPKSLKRERLIQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+LVSA + G++ ++ I+ + +V+V+G N GKST IN K+
Sbjct: 127 ELGLKPVD-VFLVSAGRGQGIKEVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL + I L + LYDTPG+++ H M+ +N+ + K++ +KE
Sbjct: 185 GEEDIITTSQFPGTTLDAIEIP--LDDGSALYDTPGIINNHQMAHYVNKKDLKILSPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S E + + +H K++NAD +++ H
Sbjct: 243 LKPRTFQLNDQQTLYFGGLARFDY--VSGERSPFICYMPNELMIHRTKLKNADALYEKHA 300
Query: 544 GIRLQPPIGQDRASELG-------TWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
G L PP G+D E T KD+K DI +GLGW ++ +
Sbjct: 301 GELLTPP-GKDEMDEFPELVAHTFTIKDKK------------TDIVFSGLGWVTVH-DAD 346
Query: 597 ASLTLWTYDGIEITLREPLV 616
+T + G+ + +R L+
Sbjct: 347 KKVTAYAPKGVHVFVRRSLI 366
>gi|401684247|ref|ZP_10816130.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. BS35b]
gi|400186552|gb|EJO20764.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. BS35b]
Length = 368
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 189/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKDR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E+A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLESASAFYDKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVITRKAII 368
>gi|421276677|ref|ZP_15727498.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SPAR10]
gi|395876883|gb|EJG87955.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SPAR10]
Length = 368
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 188/390 (48%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D DF+G + + D ++LVG K D+LP V P
Sbjct: 75 LVVNVIDIFDFNG-----SVIPGLPRFVSGND----------VILVGNKKDILPKSVKPG 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G N GKS
Sbjct: 120 KISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ + +T + PGTTL + I L + +YDTPG++H H M+ L
Sbjct: 178 TLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAHYLTA 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K V +KE++P+TY++ Q + +GGL R D + T + + LH K+
Sbjct: 236 KNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
E A + + H+G L PP +++ + T KD+ D+ +GL
Sbjct: 294 EGASDFYDKHLGTLLTPPNNKEKEDFPKLVQHVFTIKDKT-------------DLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + R+ ++
Sbjct: 341 GW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|55821597|ref|YP_140039.1| GTP-binding protein YqeH [Streptococcus thermophilus LMG 18311]
gi|55737582|gb|AAV61224.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
Length = 372
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 194/401 (48%), Gaps = 47/401 (11%)
Query: 219 ERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVI 278
E +K + A KKA E GE+ C RC LR+Y NE+ + I D +F
Sbjct: 16 EDKEKAGFTPASSIKKAEET----GEL-YCQRCFRLRHY----NEIVDVHITDDEF---- 62
Query: 279 ATRLMKPSGNANAGVVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVL 337
+L+ G+++A +VV VVD DF+G + P + D ++L
Sbjct: 63 -LKLLYEVGDSDA-LVVNVVDIFDFNGSIIPG------LSRFVSGND----------VLL 104
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
VG K D+LP V ++ +W+ RA G ++ V L SA+ ++ L+ I+ L
Sbjct: 105 VGNKKDILPKSVKDGKVTQWLTERAHEEGMRPVD-VMLTSAQNHHAIKELIQRIEALRKG 163
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
R +V+V+G N GKSTLIN K+ +T + PGTTL + I L + ++DT
Sbjct: 164 R-DVYVVGVTNVGKSTLINAIIKEITGDKDVITTSRFPGTTLDKIEIP--LDDGSYIFDT 220
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PG++H H M+ L+ + K V +KE++P+TY++ GQ + +GGL R D +
Sbjct: 221 PGIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQTLFLGGLGRFDFIDGDKQGF-- 278
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
T + N+ LH K++ AD + HVG L PP G ++ + + +
Sbjct: 279 TAFFDNNLKLHRTKLDGADAFYDKHVGSLLMPP-GPKELADFPKLVRHEFTIKDKT---- 333
Query: 578 GIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
D+ +GLGW + K + + W +G+ + +R+ ++
Sbjct: 334 --DVVFSGLGWIRVQGKTDQPTIVAAWAPEGVGVVVRKAII 372
>gi|125623108|ref|YP_001031591.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
MG1363]
gi|124491916|emb|CAL96837.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
Length = 381
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 205/437 (46%), Gaps = 72/437 (16%)
Query: 188 AKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAER-KKKAREAQKEKGEVT 246
AK ED++ L GF PAG + KKK KAER + +A +A E E
Sbjct: 8 AKIQTEDKNAL---GFLPAG-------------ALKKK--KAERDQMEAVQAGDEGSEAF 49
Query: 247 V------CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
V C RC LR+Y NE+A + D DF RL+K G NA ++V VVD
Sbjct: 50 VKNEDLYCQRCFRLRHY----NEIAPTSLTDADF-----LRLLKEIGQHNA-LIVNVVDI 99
Query: 301 VDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DF+G + P KL D L++V K D+LP + ++ W+R
Sbjct: 100 FDFNGSLIPN------LHKLTGGND----------LLMVANKRDVLPKSLKVGKMTAWLR 143
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
+A + G K + + SA+ V L+ I+ R +V+V+G N GKSTLIN
Sbjct: 144 EQAASRGL-KPKDILITSAQNKDDVAELMEAIEHYRRGR-DVYVVGVTNVGKSTLINAII 201
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K +T + PGTTL + I L + L DTPG++H M+ L ++ K V
Sbjct: 202 KSASGSEDVITTSRFPGTTLDKIEIP--LDEDSALIDTPGIIHRGQMAHYLEPEDLKYVS 259
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
RKE+ P+TY++ Q + GGL R D S E +T + +++H K+E A E +
Sbjct: 260 PRKEINPKTYQLNPEQTLFFGGLARFDF--ISGERQGMTAYFDNEINVHRTKLEGATEFY 317
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ H G L P + + R+ K++ S DI +GLGW + K A +
Sbjct: 318 EKHKGELLAPALVGAKLVR------REFKITDKS------DIVFSGLGWVRVPQK--AVV 363
Query: 600 TLWTYDGIEITLREPLV 616
W +G+++ +R+ L+
Sbjct: 364 AAWVPEGVDVVVRKALI 380
>gi|347534308|ref|YP_004840978.1| hypothetical protein LSA_06230 [Lactobacillus sanfranciscensis TMW
1.1304]
gi|345504364|gb|AEN99046.1| Uncharacterized protein yqeH [Lactobacillus sanfranciscensis TMW
1.1304]
Length = 368
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 189/383 (49%), Gaps = 43/383 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GE+ C RC LR+Y NE+ + D +F L+ G+ ++
Sbjct: 28 KSAIEKGLESGEL-YCQRCFRLRHY----NEIQPVDVSDDEF-----LHLLGKIGDTDS- 76
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV VVD D +G S+ ++ + P LV VG KVDLLPS +
Sbjct: 77 LVVYVVDIFDVNG--------SIIPGIQ------RFVGNNPILV-VGNKVDLLPSSFKES 121
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ W+R G ++ + LVSA+ + V +LL IK+ R +V+V+G N GKS
Sbjct: 122 KIKDWLRQMMNKAGIKPID-IELVSAKTNRSVDDLLEVIKKYQKNR-DVYVVGVTNVGKS 179
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN + + +T + PGTTL +++I L L DTPG++H M+ L+
Sbjct: 180 TLINQIIHQASGQEQVITTSKFPGTTLDMIKIP--LDDGHDLIDTPGVIHASQMAHYLSP 237
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K V +K ++P+ Y++ GQ + +G + R D + TV+ N+ +H K
Sbjct: 238 KDLKYVSPQKRIKPKVYQLNDGQTLFLGAIGRFDYVKGPKTGF--TVYVDNNLMIHRTKT 295
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
ENADE + H G L PP+G++ L + + KV TS D+ GLGW ++
Sbjct: 296 ENADEFFDKHAGELLNPPLGKENVVPL---QRHEFKVEDTS------DLVIEGLGWVTVP 346
Query: 593 LKGEASLTLWTYDGIEITLREPL 615
KG + + W G+ + +R+ +
Sbjct: 347 -KG-SIIAGWAPKGVSVLIRKAM 367
>gi|332524018|ref|ZP_08400270.1| ribosome biogenesis GTPase YqeH [Streptococcus porcinus str.
Jelinkova 176]
gi|332315282|gb|EGJ28267.1| ribosome biogenesis GTPase YqeH [Streptococcus porcinus str.
Jelinkova 176]
Length = 371
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 189/378 (50%), Gaps = 42/378 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+++ I D DF L+ G+++A +VV VVD
Sbjct: 34 ETGEL-YCQRCFRLRHY----NEISDVQISDDDF-----LTLLHEVGDSDA-LVVNVVDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G ++ + A +D ++LVG K D+LP +++++W+
Sbjct: 83 FDFNGSVIPGLSRFV------AGND---------VLLVGNKKDILPKSTKDSKVNQWLLE 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G ++ V L SA+ ++ L+A I + R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGLRPID-VMLTSAQNKYAIKELIALIDKFRRGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ + +T + PGTTL + I L ++DTPG++H H M+ L+ + K +
Sbjct: 186 EISGNKNIITTSRFPGTTLDKIEIP--LEDGTYIFDTPGIIHRHQMAHYLSAKDLKYISP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ GQ + + GL R D + T + N++LH K+E AD +
Sbjct: 244 KKEIKPKTYQLNAGQTLFLAGLGRFDFISGIKQGF--TAYFDNNLALHRTKLEGADAFYH 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H G L PP ++R D ++ + + +D+ +GLGW + E +
Sbjct: 302 KHRGSLLIPPDNENR--------DFPELINYEFFIDSKMDLVFSGLGWICINGSKENPVK 353
Query: 601 L--WTYDGIEITLREPLV 616
+ W G+ + R+ ++
Sbjct: 354 IAGWAPKGVAVMTRKAII 371
>gi|157931839|gb|ABW04999.1| GTP-binding protein [Lactobacillus reuteri]
Length = 375
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/359 (33%), Positives = 179/359 (49%), Gaps = 41/359 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E KE GE+ C RC LR+Y NE+A + D DF RL+ +ANA
Sbjct: 33 KSALERGKETGEL-YCQRCFRLRHY----NEIAPVSLTDDDF-----LRLLNQIRDANA- 81
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD DF+G SL L D + +LVG K DLLP +
Sbjct: 82 LIVYVVDVFDFNG--------SLIPGLHRFVGDNPV-------LLVGNKEDLLPRSLRRP 126
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L W+R +A G ++ V LVSA+K+ + +LL I++ R +V+V+G N GKS
Sbjct: 127 KLTDWIRQQANIAGLRPIDTV-LVSAKKNHQIDHLLDVIEKYRHNR-DVYVVGVTNVGKS 184
Query: 413 TLINTFAK-KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
TLIN K + GVK +T + PGTTL + I L L DTPG++H M+ L+
Sbjct: 185 TLINQIIKQRTGVK-ELITTSRFPGTTLDKIEIP--LDDGHVLVDTPGIIHQEQMAHVLS 241
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
+ K+V +KE++P+TY++ GQ + +GG+ R D E + + N+ +H K
Sbjct: 242 PKDLKIVAPQKEIKPKTYQLNDGQTLFLGGVARFDYLHG--ERAGMVAYFDNNLPIHRTK 299
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFS 590
+ NAD + H+G L PP D + + ++ S DI G+GW +
Sbjct: 300 LSNADNFYAKHLGDLLTPPT-SDEKDGFPPLERYEFHITEKS------DIVFEGVGWIT 351
>gi|94991776|ref|YP_599875.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS2096]
gi|417857511|ref|ZP_12502570.1| GTPase YqeH [Streptococcus pyogenes HKU QMH11M0907901]
gi|94545284|gb|ABF35331.1| GTP-binding protein [Streptococcus pyogenes MGAS2096]
gi|387934466|gb|EIK42579.1| GTPase YqeH [Streptococcus pyogenes HKU QMH11M0907901]
Length = 372
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 190/378 (50%), Gaps = 41/378 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+ + I D +F RL+ G+++A +VV V+D
Sbjct: 34 ETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LRLLHEVGDSDA-LVVNVIDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G ++ + + +D ++LVG K D+LP V ++ +W+
Sbjct: 83 FDFNGSIIPGLSRFI------SGND---------VLLVGNKKDILPKSVKDGKVTQWLTE 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G L+ V L SA+ +++L+ I EL R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGLRPLD-VMLTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL + I L ++DTPG++H H M+ L+ E K+V
Sbjct: 186 EITGNKDVITTSRFPGTTLDKIEIP--LDDGTFIFDTPGIIHRHQMAHYLSPKELKIVSP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GGL R D + T + + LH K+ AD +
Sbjct: 244 KKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TAFFDNQLELHRTKLAGADAFYD 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL-GLK-GEAS 598
HVG L PP EL + KL + D +DI +GLGW + G K +A
Sbjct: 302 KHVGTLLTPP----DKKELTAFP--KLVRHEFTID-QKMDIVFSGLGWIRVNGQKDSKAI 354
Query: 599 LTLWTYDGIEITLREPLV 616
+ W +G+ + +R+ ++
Sbjct: 355 VAAWAPEGVAVIVRKAII 372
>gi|365902898|ref|ZP_09440721.1| GTPase YqeH [Lactobacillus malefermentans KCTC 3548]
Length = 378
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 182/369 (49%), Gaps = 39/369 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+ + D DF +L+ +A+A ++V V+D DF+G
Sbjct: 49 CQRCFRLRHY----NEIVPVGLTDDDF-----LKLLSQIRDADA-LIVYVMDIFDFNG-- 96
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
S+ L + P L LVG K D+LP + ++L W+R RA G
Sbjct: 97 ------SVIPGLH------RFVGNNPVL-LVGNKEDILPKSLRRSKLKDWLRQRANEAGI 143
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
++ V LVSA+ + V +LL I + R +V+++G N GKSTLIN ++ K
Sbjct: 144 HPID-VALVSAKTNQSVDSLLVQIDKYRKNR-DVYIVGVTNVGKSTLINQIIRQNTGKAD 201
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL RI L L DTPG++H M+ LN ++ K+V +K ++P+
Sbjct: 202 LITTSRFPGTTLD--RIEIPLDDDHFLVDTPGIIHAEQMAHYLNGNDLKIVTPQKSIKPK 259
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
Y++ GQ + GG+ R D + TV+A N+ +H K+ENAD +++ +G L
Sbjct: 260 VYQLNEGQTLFFGGVARFDYENGPKNGF--TVYAENNLYIHRTKLENADSLYEAQLGKLL 317
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
PP ++ +LK + S D+ GLGW + + + W +G+
Sbjct: 318 SPPSTEEDIEAFPKLVRHELKTAKKS------DLVIEGLGWVT--VPEGVVVAGWAPEGV 369
Query: 608 EITLREPLV 616
+ LR+ ++
Sbjct: 370 AVILRDAMI 378
>gi|417937776|ref|ZP_12581076.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis SK970]
gi|343392040|gb|EGV04613.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis SK970]
Length = 368
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 189/391 (48%), Gaps = 55/391 (14%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV V+D DF+G + P + D ++LVG K D+LP V P
Sbjct: 75 LVVNVIDIFDFNGSVIPG------LTRFVSGND----------VLLVGNKKDILPKSVKP 118
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G N GK
Sbjct: 119 GKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGK 176
Query: 412 STLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
STLIN ++ + +T + PGTTL + I L + +YDTPG++H H M+ L
Sbjct: 177 STLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAHYLT 234
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
K V +KE++P+TY++ Q + +GGL R D S E T + + LH K
Sbjct: 235 AKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELKLHRTK 292
Query: 532 IENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGIDIAAAG 585
+E A + H+G L PP +++ + T KD+ D+ +G
Sbjct: 293 LEGASAFYDKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------DLVISG 339
Query: 586 LGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
LGW + + G A + +W +G+ + R+ ++
Sbjct: 340 LGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|414157031|ref|ZP_11413331.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. F0442]
gi|410868347|gb|EKS16312.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. F0442]
Length = 368
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 190/394 (48%), Gaps = 61/394 (15%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVHLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G N
Sbjct: 116 VKDSKVTHWLMERAHEEGMRPVD-VVLTSAQNKSAIKDLMEKIEQYRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L K V +KE++P+TY++ Q + +GGL R D + + T + + LH
Sbjct: 232 YLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIKGEKQGF--TAFFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGIDIA 582
K+E A + HVG L PP +++ S T KD+ D+
Sbjct: 290 RTKLEGATAFYDKHVGGLLTPPNSKEKEEFPPLVSHEFTIKDKT-------------DLV 336
Query: 583 AAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+GLGW + + G+A + +W +G+ + R+ ++
Sbjct: 337 ISGLGW--IRVNGKAKVAVWAPEGVTVVTRKAII 368
>gi|374672293|dbj|BAL50184.1| GTP-binding protein [Lactococcus lactis subsp. lactis IO-1]
Length = 401
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 204/430 (47%), Gaps = 58/430 (13%)
Query: 188 AKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTV 247
AK ED++ L GF PAG + +++ ER + + + + +A K E
Sbjct: 28 AKIQTEDKNAL---GFLPAGA----LKKKIAERDQMEAVQAGDEGSEA----SIKTEDLY 76
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG-M 306
C RC LR+Y NE+A + D DF RL+K G +A ++V VVD DF+G +
Sbjct: 77 CQRCFRLRHY----NEIAPTSLTDADF-----LRLLKEIGQHDA-LIVNVVDIFDFNGSL 126
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
P KL D L++V K D+LP + +L W+R +A A
Sbjct: 127 IPN------LHKLTGGND----------LLMVANKRDVLPKSLKVGKLTAWLREQA-ASR 169
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
+ K + + SA+ V L+ I+ R +V+V+G N GKSTLIN K
Sbjct: 170 SLKPKDILVTSAQNKDDVAELMEAIEYYRRGR-DVYVVGVTNVGKSTLINAIIKSASGSE 228
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+T + PGTTL + I L + L DTPG++H M+ L ++ K V RKE++P
Sbjct: 229 DVITTSRFPGTTLDKIEIP--LDEDSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEIKP 286
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
+TY++ Q + GGL R D S E +T + +++H K+E A E ++ H G
Sbjct: 287 KTYQLNPEQTLFFGGLARFDF--ISGERQGMTAYFDNEINVHRTKLEGATEFYEKHKGEL 344
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L P + + R+ K++ S DI +GLGW + K A + W +G
Sbjct: 345 LAPALVGAKLVR------REFKITDKS------DIVFSGLGWVRVPQK--AVVAAWVPEG 390
Query: 607 IEITLREPLV 616
++I +R+ L+
Sbjct: 391 VDIVVRKALI 400
>gi|418975267|ref|ZP_13523176.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK1074]
gi|383348638|gb|EID26597.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK1074]
Length = 368
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 189/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E+A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLESASAFYDKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVITRKAII 368
>gi|385829792|ref|YP_005867605.1| GTP-binding protein [Lactococcus lactis subsp. lactis CV56]
gi|418037128|ref|ZP_12675517.1| hypothetical protein LLCRE1631_00324 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|326405800|gb|ADZ62871.1| GTP-binding protein [Lactococcus lactis subsp. lactis CV56]
gi|354695007|gb|EHE94635.1| hypothetical protein LLCRE1631_00324 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
Length = 401
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 204/430 (47%), Gaps = 58/430 (13%)
Query: 188 AKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTV 247
AK ED++ L GF PAG + +++ ER + + + + +A K E
Sbjct: 28 AKIQTEDKNAL---GFLPAGA----LKKKIAERDQMEAVQAGDEGSEA----SIKTEDLY 76
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG-M 306
C RC LR+Y NE+A + D DF RL+K G +A ++V VVD DF+G +
Sbjct: 77 CQRCFRLRHY----NEIAPTSLTDADF-----LRLLKEIGQHDA-LIVNVVDIFDFNGSL 126
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
P KL D L++V K D+LP + +L W+R +A A
Sbjct: 127 IPN------LHKLTGGND----------LLMVANKRDVLPKSLKVGKLTAWLREQA-ASR 169
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
+ K + + SA+ V L+ I+ R +V+V+G N GKSTLIN K
Sbjct: 170 SLKPKDILVTSAQNKDDVAELMETIEYYRRGR-DVYVVGVTNVGKSTLINAIIKSASGSE 228
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+T + PGTTL + I L + L DTPG++H M+ L ++ K V RKE++P
Sbjct: 229 DVITTSRFPGTTLNKIEIP--LDEDSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEIKP 286
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
+TY++ Q + GGL R D S E +T + +++H K+E A E ++ H G
Sbjct: 287 KTYQLNPEQTLFFGGLARFDF--ISGERQGMTAYFDNEINVHRTKLEGATEFYEKHKGEL 344
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L P + + R+ K++ S DI +GLGW + K A + W +G
Sbjct: 345 LAPALVGAKLVR------REFKITDKS------DIVFSGLGWVRVPQK--AVVAAWVPEG 390
Query: 607 IEITLREPLV 616
+++ +R+ L+
Sbjct: 391 VDVVVRKALI 400
>gi|336064941|ref|YP_004559800.1| putative GTPase [Streptococcus pasteurianus ATCC 43144]
gi|334283141|dbj|BAK30714.1| putative GTPase [Streptococcus pasteurianus ATCC 43144]
Length = 372
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 193/393 (49%), Gaps = 55/393 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GE+ C RC LR+Y NE+ + I D +F +L+ G+++A
Sbjct: 26 KAALEKGLESGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV VVD DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V +++ +W+ RA G ++ V L SA+ +++L+ I++L R +V+V+G
Sbjct: 114 KSVKDSKVTQWLTERAHEEGLRPVD-VILTSAQNHQAIKDLIEKIEKLRRGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN K+ + +T + PGTTL + I L + ++DTPG++H H M
Sbjct: 172 TNVGKSTLINAIIKEITGEKDIITTSRFPGTTLDKIEIP--LDDGSYIFDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K + +KE++P+TY++ Q + + GL R D + T + N+
Sbjct: 230 AHYLGDKNLKYISPKKEIKPKTYQLNPEQTLFLAGLGRFDFISGDKQGF--TAYFDNNLK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNG-IDIAAAG 585
LH K+ AD ++ HVG L PPI + EL + K+ + + +D+ +G
Sbjct: 288 LHRTKLAGADALYDKHVGSLLTPPIDK----ELADFP----KLVRHEFTIKAKMDVVYSG 339
Query: 586 LGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
LGW + ++ + + W +G+ + LR+ L+
Sbjct: 340 LGWIRIKASQDSPVKIAAWAPEGVAVLLRKALI 372
>gi|306825774|ref|ZP_07459113.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|414157993|ref|ZP_11414287.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. F0441]
gi|304432135|gb|EFM35112.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|410870538|gb|EKS18495.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. F0441]
Length = 368
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 188/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|406577139|ref|ZP_11052757.1| GTPase YqeH [Streptococcus sp. GMD6S]
gi|404460314|gb|EKA06584.1| GTPase YqeH [Streptococcus sp. GMD6S]
Length = 368
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 188/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKVII 368
>gi|385837239|ref|YP_005874869.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris A76]
gi|414073525|ref|YP_006998742.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
UC509.9]
gi|358748467|gb|AEU39446.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris A76]
gi|413973445|gb|AFW90909.1| GTP-binding protein YqeH [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 391
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 204/430 (47%), Gaps = 58/430 (13%)
Query: 188 AKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTV 247
AK ED++ L GF PAG + +++ ER + + + + +A K E
Sbjct: 18 AKIQTEDKNAL---GFLPAGA----LKKKIAERDQMEAVQAGDEGSEA----SIKTEDLY 66
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG-M 306
C RC LR+Y NE+A + D DF RL+K G +A ++V VVD DF+G +
Sbjct: 67 CQRCFRLRHY----NEIAPTSLTDADF-----LRLLKEIGQHDA-LIVNVVDIFDFNGSL 116
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
P KL D L++V K D+LP + +L W+R +A A
Sbjct: 117 IPN------LHKLTGGND----------LLMVANKRDVLPKSLKVGKLTAWLREQA-ASR 159
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
+ K + + SA+ V L+ I+ R +V+V+G N GKSTLIN K
Sbjct: 160 SLKPKDILVTSAQNKDDVAELMEAIEYYRRGR-DVYVVGVTNVGKSTLINAIIKSASGSE 218
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+T + PGTTL + I L + L DTPG++H M+ L ++ K V RKE++P
Sbjct: 219 DVITTSRFPGTTLDKIEIP--LDEDSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEIKP 276
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
+TY++ Q + GGL R D S E +T + +++H K+E A E ++ H G
Sbjct: 277 KTYQLNPEQTLFFGGLARFDF--ISGERQGMTAYFDNEINVHRTKLEGATEFYEKHKGEL 334
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L P + + R+ K++ S DI +GLGW + K A + W +G
Sbjct: 335 LAPALVGAKLVR------REFKITDKS------DIVFSGLGWVRVPQK--AVVAAWVPEG 380
Query: 607 IEITLREPLV 616
+++ +R+ L+
Sbjct: 381 VDVVVRKALI 390
>gi|315612639|ref|ZP_07887551.1| ribosome biogenesis GTPase YqeH [Streptococcus sanguinis ATCC
49296]
gi|315315226|gb|EFU63266.1| ribosome biogenesis GTPase YqeH [Streptococcus sanguinis ATCC
49296]
Length = 368
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 188/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E+A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLESASAFYDKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGSAKVAVWAPEGVAVVTRKAII 368
>gi|417847402|ref|ZP_12493370.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK1073]
gi|339457050|gb|EGP69631.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK1073]
Length = 368
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 187/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVKLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPID-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIEGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + HVG L PP +++ +D V + D+ +GL
Sbjct: 288 LHRTKLEGASAFYDKHVGTLLTPPNSKEK-------EDFPKLVQHVFNIKDKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + R+ ++
Sbjct: 341 GW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|381182528|ref|ZP_09891330.1| GTPase YqeH [Listeriaceae bacterium TTU M1-001]
gi|380317578|gb|EIA20895.1| GTPase YqeH [Listeriaceae bacterium TTU M1-001]
Length = 366
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 181/373 (48%), Gaps = 39/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF +++ G+ A ++V VVD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LKILNDLGSQKA-LIVYVVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
DG S L + + +LVG K DLLP + +L R++R RAK
Sbjct: 83 DG--------SWLPGLHRFVGNNPV-------LLVGNKADLLPKSLKRDKLTRYMRTRAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G +L+ I+EL +V+V+G N GKSTLIN K
Sbjct: 128 DLGL-RATDVALISAEKGYGFESLMEQIEELRD-GADVFVVGCTNVGKSTLINRIIKFAT 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L L DTPG+++ H M+ + K++ +KE
Sbjct: 186 GENNVITTSQFPGTTLDKIEIP--LEGNRVLVDTPGIINHHQMAHFIGPKTLKLITPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P Y++ Q + G L RLD + E V+ S + H K+E A+ +++
Sbjct: 244 IKPVVYQLNQSQTLFFGALARLDFTEG--ERSSFIVYMSNQLEPHRTKLEKANHLYETQR 301
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G+ L PP +D A +L + + + DI +GLGW + G +T W
Sbjct: 302 GLILNPPSEEDVA-DLPELVPHQFVIREKA------DIVFSGLGWVCVP-SGHVKVTAWV 353
Query: 604 YDGIEITLREPLV 616
G+ +T+REPL+
Sbjct: 354 PKGVNVTIREPLI 366
>gi|383479447|ref|YP_005388341.1| GTP-binding protein [Streptococcus pyogenes MGAS15252]
gi|383493371|ref|YP_005411047.1| GTP-binding protein [Streptococcus pyogenes MGAS1882]
gi|378927437|gb|AFC65643.1| GTP-binding protein [Streptococcus pyogenes MGAS15252]
gi|378929099|gb|AFC67516.1| GTP-binding protein [Streptococcus pyogenes MGAS1882]
Length = 372
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 187/378 (49%), Gaps = 41/378 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+ + I D +F RL+ G+++A +VV V+D
Sbjct: 34 ETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LRLLHEVGDSDA-LVVNVIDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G ++ + + +D ++LVG K D+LP V ++ +W+
Sbjct: 83 FDFNGSIIPGLSRFI------SGND---------VLLVGNKKDILPKSVKDGKVTQWLTE 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G L+ V L SA+ ++ L+ I EL R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGLRPLD-VMLTSAQNKYAIKYLIERINELRNGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL + I L ++DTPG++H H M+ L+ E K+V
Sbjct: 186 EITGNKDVITTSRFPGTTLDKIEIP--LDDGTFIFDTPGIIHRHQMAHYLSPKELKIVSP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GGL R D + T + + LH K+ AD +
Sbjct: 244 KKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TAFFDNQLELHRTKLAGADAFYD 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL-GLK-GEAS 598
HVG L PP G+ + + + +DI +GLGW + G K +A
Sbjct: 302 KHVGTLLTPP-GKKELTAFPKLVRHEFTID------QKMDIVFSGLGWIRVNGQKDSKAI 354
Query: 599 LTLWTYDGIEITLREPLV 616
+ W +G+ + +R+ ++
Sbjct: 355 VAAWAPEGVAVIVRKAII 372
>gi|417006045|ref|ZP_11944615.1| GTP-binding protein YqeH [Streptococcus agalactiae FSL S3-026]
gi|341576226|gb|EGS26637.1| GTP-binding protein YqeH [Streptococcus agalactiae FSL S3-026]
Length = 372
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 190/387 (49%), Gaps = 43/387 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + I D +F +L+ G+++A
Sbjct: 26 RAALEKGLETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV V+D DF+G + P + D ++LVG K D+LP V
Sbjct: 75 LVVNVIDIFDFNGSIIPG------LSRFVSGND----------VLLVGNKKDILPKSVKD 118
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
++ +W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G N GK
Sbjct: 119 GKVTQWLTERAHEEGLRPVD-VILTSAQNHHAIKDLIDTIEKYRHGR-DVYVVGVTNVGK 176
Query: 412 STLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
STLIN ++ +T + PGTTL + I L + ++DTPG++H H M+ L
Sbjct: 177 STLINAIIREITGSRDVITTSRFPGTTLDKIEIP--LDDGSYIFDTPGIIHRHQMAHYLT 234
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
K V +KE++P+TY++ Q + + GL R D + T + N++LH K
Sbjct: 235 AKNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGF--TAYFDNNLNLHRTK 292
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ ADE + HVG L PP ++ S+ + + + +DI +GLGW +
Sbjct: 293 LVGADEFYTKHVGKLLIPPTSKE-VSDFPKLVRHEFTIK------DKMDIVYSGLGWIRV 345
Query: 592 GLKGEASLTL--WTYDGIEITLREPLV 616
+ E + + W +G+ + LR+ L+
Sbjct: 346 KSETENPVVVAAWAPEGVAVVLRKALI 372
>gi|417922946|ref|ZP_12566429.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK569]
gi|342837476|gb|EGU71661.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK569]
Length = 368
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 187/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + H+G L PP +++ +D V + D+ +GL
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEK-------EDFPKLVQHVFNIKDKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + R+ ++
Sbjct: 341 GW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|281490709|ref|YP_003352689.1| GTP-binding protein [Lactococcus lactis subsp. lactis KF147]
gi|281374478|gb|ADA63999.1| GTP-binding protein [Lactococcus lactis subsp. lactis KF147]
Length = 401
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 204/430 (47%), Gaps = 58/430 (13%)
Query: 188 AKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTV 247
AK ED++ L GF PAG + +++ ER + + + + +A K E
Sbjct: 28 AKIQTEDKNAL---GFLPAGA----LKKKIAERDQMEAVQAGDEGSEA----SIKTEDLY 76
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG-M 306
C RC LR+Y NE+A + D DF RL+K G +A ++V VVD DF+G +
Sbjct: 77 CQRCFRLRHY----NEIAPTSLTDADF-----LRLLKEIGQHDA-LIVNVVDIFDFNGSL 126
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
P KL D L++V K D+LP + +L W+R +A A
Sbjct: 127 IPN------LHKLTGGND----------LLMVANKRDVLPKSLKVGKLTAWLREQA-ASR 169
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
+ K + + SA+ V L+ I+ R +V+V+G N GKSTLIN K
Sbjct: 170 SLKPKDILVTSAQNKDDVAELMEAIEYYRRGR-DVYVVGVTNVGKSTLINAIIKSASGSE 228
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+T + PGTTL + I L + L DTPG++H M+ L ++ K V RKE++P
Sbjct: 229 DVITTSRFPGTTLDKIEIP--LDEDSALIDTPGIIHRGQMAHYLEPEDLKYVSPRKEIKP 286
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
+TY++ Q + GGL R D S E +T + +++H K+E A E ++ H G
Sbjct: 287 KTYQLNPEQTLFFGGLARFDF--ISGERQGMTAYFDNEINVHRTKLEGATEFYEKHKGEL 344
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L P + + R+ K++ S DI +GLGW + K A + W +G
Sbjct: 345 LAPALVGAKLVR------REFKITDKS------DIVFSGLGWVRVPQK--AVVAAWVPEG 390
Query: 607 IEITLREPLV 616
+++ +R+ L+
Sbjct: 391 VDVVVRKALI 400
>gi|319946393|ref|ZP_08020630.1| GTP-binding protein [Streptococcus australis ATCC 700641]
gi|417919967|ref|ZP_12563488.1| ribosome biogenesis GTPase YqeH [Streptococcus australis ATCC
700641]
gi|319747361|gb|EFV99617.1| GTP-binding protein [Streptococcus australis ATCC 700641]
gi|342831523|gb|EGU65839.1| ribosome biogenesis GTPase YqeH [Streptococcus australis ATCC
700641]
Length = 368
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 190/394 (48%), Gaps = 61/394 (15%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLEIGEV-YCQRCFRLRHY----NEITDVHLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
+VV VVD DF+G P+ A + ++LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNGSVIPGLPRFVAGN-------------------DVLLVGNKKDILPKS 115
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
V +++ W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G N
Sbjct: 116 VKDSKVTHWLMERAHEEGMRPVD-VVLTSAQNKSAIKDLMEKIEQHRKGR-DVYVVGVTN 173
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M+
Sbjct: 174 VGKSTLINAIIQEITGDKDIITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAH 231
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
L K V +KE++P+TY++ Q + +GGL R D + + T + + LH
Sbjct: 232 YLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIKGEKQGF--TAFFDNELKLH 289
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGIDIA 582
K+E A + HVG L PP +++ S T KD+ D+
Sbjct: 290 RTKLEGATAFYDKHVGGLLTPPNSKEKEEFPPLVSHEFTIKDKT-------------DLV 336
Query: 583 AAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+GLGW + + GEA + +W +G+ + R+ ++
Sbjct: 337 ISGLGW--IRVNGEARVAVWAPEGVAVVSRKAII 368
>gi|306829001|ref|ZP_07462192.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis ATCC 6249]
gi|304428806|gb|EFM31895.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis ATCC 6249]
Length = 368
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 187/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLLERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEKEDFPKLVEHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|424739106|ref|ZP_18167528.1| GTP-binding protein YqeH [Lysinibacillus fusiformis ZB2]
gi|422946971|gb|EKU41373.1| GTP-binding protein YqeH [Lysinibacillus fusiformis ZB2]
Length = 367
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 179/374 (47%), Gaps = 40/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
+V +C RC L+NY NE+ + D DF R++ G++V +VD DF
Sbjct: 33 DVVICQRCFRLKNY----NEIQPVSLTDDDFLRILNGL------GTQQGLIVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L + K P L L+ K DLLP V P ++ W++ AK
Sbjct: 83 NG--------SWLPGLH------RFVGKNPVL-LIANKADLLPKSVKPKKVINWLKREAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRG-NVWVIGAQNAGKSTLINTFAKKE 422
A G ++ V LVSA K G+ + I A +G NV+V+G N GKST IN K+
Sbjct: 128 ALGLQPVD-VLLVSAHKGKGMAEAMEAID--AYRKGQNVYVVGCTNVGKSTFINRIIKQA 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + LYDTPG+++ H M+ ++ E K + +K
Sbjct: 185 TGEGEVITTSHFPGTTLDMIDIP--LDDGSALYDTPGIINHHQMAHHIDSSELKYIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P+ Y+ GQ + +G L R D Q T+ + ++ +H K+E AD +++ H
Sbjct: 243 EIKPKVYQQNAGQTLFIGALARFDFIQGDRSAF--TIHVANDLPIHRTKLEKADALYEEH 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP D +L + + DV +GLGW ++ + +
Sbjct: 301 KGELLAPPTA-DFIDQLPPLVRHEFSIKEAKTDV-----VFSGLGWITVQ-HANVVVAAY 353
Query: 603 TYDGIEITLREPLV 616
G+++++R L+
Sbjct: 354 APKGVQVSIRPSLI 367
>gi|307704298|ref|ZP_07641216.1| conserved hypothetical protein [Streptococcus mitis SK597]
gi|307622134|gb|EFO01153.1| conserved hypothetical protein [Streptococcus mitis SK597]
Length = 368
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 187/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN+ ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINSIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + HVG L PP +++ +D V + D+ +GL
Sbjct: 288 LHRTKLEGASAFYDKHVGTLLTPPNSKEK-------EDFPKLVQHVFNIKDKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + R+ ++
Sbjct: 341 GW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|347753133|ref|YP_004860698.1| ribosome biogenesis GTPase YqeH [Bacillus coagulans 36D1]
gi|347585651|gb|AEP01918.1| ribosome biogenesis GTPase YqeH [Bacillus coagulans 36D1]
Length = 368
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 190/377 (50%), Gaps = 46/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NEV + + D DF +++ RL G +A +VV +VD DF
Sbjct: 34 EQVICQRCFRLKHY----NEVQDVPLTDDDFLKIL-NRL----GQVDA-LVVKIVDIFDF 83
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
+G F + A K+ ++L+G K DLLP V ++ W++
Sbjct: 84 NGSWLPGFHRFAGKN-------------------PVLLIGNKEDLLPKSVKRAKMANWMK 124
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
+AK G ++ V LVSA K G+ +A I++ + +V+V G N GKST IN
Sbjct: 125 QQAKELGLRPVD-VLLVSAAKGHGMDEAMAAIEQYRNGK-DVYVAGCTNVGKSTFINRII 182
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
++ + +T + PGTTL + IG L LYDTPG+++ H M+ + ++E K++
Sbjct: 183 RQATGEKEVITTSYFPGTTLDM--IGIPLDDGTSLYDTPGIINHHQMAHFVGKNELKVIT 240
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + GGL RLD + + + S + +H K+ENAD+++
Sbjct: 241 PKKEIKPTVFQLNEQQTLFFGGLARLDYIKGGRRSF--VCYVSNALKIHRTKLENADDLY 298
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+G LQPP G+ A++ + + DI +GLGW ++ G A +
Sbjct: 299 ARQLGELLQPP-GKAEAADFPALVRHEFSIKEGK-----TDIVFSGLGWVTVNEPG-AVV 351
Query: 600 TLWTYDGIEITLREPLV 616
+ G+++ LR+ L+
Sbjct: 352 AAYVPKGVQVMLRQSLI 368
>gi|307708267|ref|ZP_07644734.1| GTP-binding protein [Streptococcus mitis NCTC 12261]
gi|307615713|gb|EFN94919.1| GTP-binding protein [Streptococcus mitis NCTC 12261]
Length = 368
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 186/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + HVG L PP +++ +D V D+ +GL
Sbjct: 288 LHRTKLEGASAFYDKHVGTLLTPPNSKEK-------EDFPKLVQHVFNIKEKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + R+ ++
Sbjct: 341 GW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|169829302|ref|YP_001699460.1| GTP-binding protein YqeH [Lysinibacillus sphaericus C3-41]
gi|168993790|gb|ACA41330.1| Hypothetical yqeH protein [Lysinibacillus sphaericus C3-41]
Length = 367
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 181/375 (48%), Gaps = 42/375 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
+V +C RC L+NY NE+ + D DF R++ G++V +VD DF
Sbjct: 33 DVVICQRCFRLKNY----NEIQPVSLTDDDFLRILNGL------GTQQGLIVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L + K P L L+ K DLLP V P ++ W++ AK
Sbjct: 83 NG--------SWLPGLH------RFVGKNPVL-LIANKADLLPKSVKPKKVINWLKREAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
A G ++ V LVSA K G+ + I E + NV+V+G N GKST IN K+
Sbjct: 128 ALGLQPVD-VLLVSAHKGKGMAEAMEAIDEYRQGQ-NVYVVGCTNVGKSTFINRIIKQAT 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L + L+DTPG+++ H M+ ++ E K + +KE
Sbjct: 186 GEGEVITTSHFPGTTLDMIEIP--LDDGSALFDTPGIINHHQMAHHIDSSELKYIMPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P+ Y+ GQ + +G L R D Q T+ + ++ +H K+E AD ++ H
Sbjct: 244 IKPKVYQQNAGQTLFIGALARFDFIQGDRSAF--TIHVANDLPIHRTKLEKADTLYTEHK 301
Query: 544 GIRLQPPIGQ--DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTL 601
G L PP + D+ L + +K + T D+ +GLGW ++ +
Sbjct: 302 GDLLAPPTAEFIDQLPPL-VRHEFSIKEAKT-------DVVFSGLGWITVQ-HANVVVAA 352
Query: 602 WTYDGIEITLREPLV 616
+ G+++++R L+
Sbjct: 353 YAPKGVQVSIRPSLI 367
>gi|419706291|ref|ZP_14233817.1| Putative conserved GTP-binding protein [Streptococcus salivarius
PS4]
gi|383283961|gb|EIC81899.1| Putative conserved GTP-binding protein [Streptococcus salivarius
PS4]
Length = 372
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 193/401 (48%), Gaps = 47/401 (11%)
Query: 219 ERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVI 278
E +K + A KKA E G++ C RC LR+Y NE+ + I D +F
Sbjct: 16 EDKEKAGYTPASSIKKAEET----GDL-YCQRCFRLRHY----NEIVDVHITDDEF---- 62
Query: 279 ATRLMKPSGNANAGVVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVL 337
+L+ G+++A +VV VVD DF+G + P + D ++L
Sbjct: 63 -LKLLHEVGDSDA-LVVNVVDIFDFNGSIIPG------LSRFVSGND----------VLL 104
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
VG K D+LP V ++ +W+ RA G ++ V L SA+ ++ L+ I++L
Sbjct: 105 VGNKKDILPKSVKDGKVTQWLTERAYEEGMRPVD-VMLTSAQNHHAIKELIQRIEKLRKG 163
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
R +V+V+G N GKSTLIN K+ +T + PGTTL + I L ++DT
Sbjct: 164 R-DVYVVGVTNVGKSTLINAIIKEITGDKDVITTSRFPGTTLDKIEIP--LDDGTYIFDT 220
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PG++H H M+ L+ + K V +KE++P+TY++ Q + +GGL R D +
Sbjct: 221 PGIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNASQTLFLGGLGRFDFIDGDKQGF-- 278
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
T + N+ LH K+E AD + HVG L PP G ++ + V +
Sbjct: 279 TAFFDNNLKLHRTKLEGADTFYDKHVGSLLMPP-GPKDLTDFPKLVRHEFTVKDKT---- 333
Query: 578 GIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
DI +GLGW + K + + W +G+ + +R+ ++
Sbjct: 334 --DIVFSGLGWIRVQGKADQPTIVAAWAPEGVGVVVRKAII 372
>gi|393200248|ref|YP_006462090.1| GTPase [Solibacillus silvestris StLB046]
gi|406667405|ref|ZP_11075163.1| hypothetical protein B857_02989 [Bacillus isronensis B3W22]
gi|327439579|dbj|BAK15944.1| predicted GTPase [Solibacillus silvestris StLB046]
gi|405384773|gb|EKB44214.1| hypothetical protein B857_02989 [Bacillus isronensis B3W22]
Length = 367
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 180/373 (48%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E+ +C RC L+NY NE+ + D DF R++ G++V +VD DF
Sbjct: 33 EMIICQRCFRLKNY----NEIQPVSLTDDDFLRILNGL------GQQQGLIVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L + + +LV K DLLP V ++ W++ AK
Sbjct: 83 NG--------SWLPGLHRFVGNNPV-------LLVANKADLLPKSVKEKKVINWLKREAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
A G ++ V LVSA K LG++ ++ I+E + +V+V+G N GKST IN K+
Sbjct: 128 ALGLKPVD-VKLVSAHKGLGMQEVVEAIEEYRNGK-DVYVVGCTNVGKSTFINRIIKQAT 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL + IG L + LYDTPG+++ H M+ ++ E K + +KE
Sbjct: 186 GEGEIITTSHFPGTTLDM--IGIPLDDGSSLYDTPGIINHHQMAHHIDSSELKYIMPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P+ Y+ GQ + +G L R D Q E TV + ++ +H K+E AD++++ H
Sbjct: 244 IKPKVYQQNAGQTLFIGALARFDFIQG--ERSAFTVHVANDLPIHRTKLERADQLYEEHK 301
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP + +L + + DV +GLGW ++ +
Sbjct: 302 GELLAPPTSK-HIDQLPPLVRHEFSIKEPKTDV-----VISGLGWVTVQ-HANVVVAAHA 354
Query: 604 YDGIEITLREPLV 616
G+E+ +R L+
Sbjct: 355 PKGVEVFIRPSLI 367
>gi|94987891|ref|YP_595992.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS9429]
gi|94541399|gb|ABF31448.1| GTP-binding protein [Streptococcus pyogenes MGAS9429]
Length = 372
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 189/378 (50%), Gaps = 41/378 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+ + I D +F RL+ G+++A +VV V+D
Sbjct: 34 ETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LRLLHEVGDSDA-LVVNVIDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G ++ + + +D ++LVG K D+LP V ++ +W+
Sbjct: 83 FDFNGSIIPGLSRFI------SGND---------VLLVGNKKDILPKSVKDGKVTQWLTE 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G L+ V L SA+ +++L+ I EL R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGLRPLD-VMLTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL + I L ++DTPG++H H M+ L+ E K+V
Sbjct: 186 EITGNKDVITTSRFPGTTLDKIEIP--LDDGTFIFDTPGIIHRHQMAHYLSPKELKIVSP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GGL R D + T + LH K+ AD +
Sbjct: 244 KKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TALFDNQLELHRTKLAGADAFYD 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL-GLK-GEAS 598
HVG L PP EL + KL + D +DI +GLGW + G K +A
Sbjct: 302 KHVGTLLTPP----DKKELTAFP--KLVRHEFTID-QKMDIVFSGLGWIRVNGQKDSKAI 354
Query: 599 LTLWTYDGIEITLREPLV 616
+ W +G+ + +R+ ++
Sbjct: 355 VAAWAPEGVAVIVRKAII 372
>gi|322373553|ref|ZP_08048089.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. C150]
gi|321278595|gb|EFX55664.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. C150]
Length = 372
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 193/401 (48%), Gaps = 47/401 (11%)
Query: 219 ERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVI 278
E +K + A KKA E G++ C RC LR+Y NE+ + I D +F
Sbjct: 16 EDKEKAGYTPASSIKKAEET----GDL-YCQRCFRLRHY----NEIVDVHITDDEF---- 62
Query: 279 ATRLMKPSGNANAGVVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVL 337
+L+ G+++A +VV VVD DF+G + P + D ++L
Sbjct: 63 -LKLLHEVGDSDA-LVVNVVDIFDFNGSIIPG------LSRFVSGND----------VLL 104
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
VG K D+LP V ++ +W+ RA G ++ V L SA+ ++ L+ I++L
Sbjct: 105 VGNKKDILPKSVKDGKVTQWLTERAYEEGMRPVD-VMLTSAQNHHAIKELIKRIEKLRKG 163
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
R +V+V+G N GKSTLIN K+ +T + PGTTL + I L ++DT
Sbjct: 164 R-DVYVVGVTNVGKSTLINAIIKEITGDKDVITTSRFPGTTLDKIEIP--LDDGTYIFDT 220
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PG++H H M+ L+ + K V +KE++P+TY++ Q + +GGL R D +
Sbjct: 221 PGIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNASQTLFLGGLGRFDFIDGDKQGF-- 278
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
T + N+ LH K+E AD + HVG L PP G ++ + V +
Sbjct: 279 TAFFDNNLKLHRTKLEGADAFYDKHVGSLLMPP-GPKDLTDFPKLVRHEFTVKDKT---- 333
Query: 578 GIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
DI +GLGW + K + + W +G+ + +R+ ++
Sbjct: 334 --DIVFSGLGWIRVQGKADQPTIVAAWAPEGVGVVVRKAII 372
>gi|419783378|ref|ZP_14309166.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK610]
gi|383182262|gb|EIC74820.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK610]
Length = 368
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 187/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + H+G L PP +++ +D V + D+ +GL
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEK-------EDFPKLVQHVFIIKDKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + R+ ++
Sbjct: 341 GW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|385262972|ref|ZP_10041069.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. SK643]
gi|385188947|gb|EIF36417.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. SK643]
Length = 368
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 187/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEKEDFPKLVEHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|149183162|ref|ZP_01861611.1| YqeH [Bacillus sp. SG-1]
gi|148849145|gb|EDL63346.1| YqeH [Bacillus sp. SG-1]
Length = 371
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 187/376 (49%), Gaps = 39/376 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
EK E+ VC RC L++Y NEV + + D DF +++ G G++V VVD
Sbjct: 35 EKEEI-VCQRCFRLKHY----NEVQDVSLTDDDF-----LKILNEIGKGE-GLIVKVVDI 83
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G + + + ++L+G KVDLLP V P++L W++
Sbjct: 84 FDFNGSWLPGLHRFVGNN---------------PVLLIGNKVDLLPKSVKPSKLINWMKF 128
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
+AK G ++ V L+SA K + + I++ R +V+V+G N GKST IN
Sbjct: 129 QAKQLGLKPVD-VKLMSAEKGQYIEEAVEAIEQYRDGR-SVYVVGCTNVGKSTFINRVIH 186
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL ++ I L L DTPG+++ H M+ +++ + K +
Sbjct: 187 HVTGEKDIITTSHFPGTTLDMIEIP--LDDGEALIDTPGIINHHQMAHYVDKRDLKYITP 244
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+ +++ GQ + GGL R D + + S +++H K++ ADE+++
Sbjct: 245 KKEIKPKVFQLNEGQTLFFGGLSRFDYLSGGRRSF--VCYLSNELNIHRTKVDKADELYE 302
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
NH G+ LQPP +D E + +V DI +GLGW ++ G A++
Sbjct: 303 NHAGVMLQPP-RKDDMGEFPELVRHEFRVKEGK-----TDIVFSGLGWVTINDPG-ATIA 355
Query: 601 LWTYDGIEITLREPLV 616
G+ + LR+ L+
Sbjct: 356 AHVPKGVSVFLRKSLI 371
>gi|293364879|ref|ZP_06611596.1| GTP-binding protein [Streptococcus oralis ATCC 35037]
gi|307703131|ref|ZP_07640077.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|291316329|gb|EFE56765.1| GTP-binding protein [Streptococcus oralis ATCC 35037]
gi|307623206|gb|EFO02197.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
Length = 368
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 188/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V +++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSSKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|358061220|ref|ZP_09147884.1| GTP-binding protein YqeH [Staphylococcus simiae CCM 7213]
gi|357256313|gb|EHJ06697.1| GTP-binding protein YqeH [Staphylococcus simiae CCM 7213]
Length = 366
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 178/355 (50%), Gaps = 53/355 (14%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNAN-AGVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG AN +G++V VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLANKSGIIVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGV 424
G + + + L+SA K G+ +LL+ I ++ +V+V+G N GKSTLIN +
Sbjct: 129 YGL-EADDIVLISAEKGWGIEDLLSSIAKIR-QHEDVYVVGTTNVGKSTLINKLIEASVG 186
Query: 425 KVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKEL 484
+ +T + PGTTL ++ I L +YDTPG++ H M+ + E K + +KE+
Sbjct: 187 EKDVVTTSRFPGTTLDMIDIP--LDETTFMYDTPGIIQDHQMTHIVTEKELKTIMPKKEI 244
Query: 485 QPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+ R Y++ Q + GGL R+D + + + +++H K+E A+E+WK+ +G
Sbjct: 245 KQRVYQLNENQTLFFGGLARIDYISGGKRPL--ICFFANELNIHRTKLEKANELWKSQLG 302
Query: 545 IRLQPP-------IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
L PP + + +A L T K+++ DI +GLG+ ++G
Sbjct: 303 ELLTPPNNPENFDLSEVKAVRLETGKEKR-------------DIMISGLGFITIG 344
>gi|422415992|ref|ZP_16492949.1| ribosome biogenesis GTPase YqeH [Listeria innocua FSL J1-023]
gi|313623708|gb|EFR93856.1| ribosome biogenesis GTPase YqeH [Listeria innocua FSL J1-023]
Length = 366
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 184/377 (48%), Gaps = 47/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L R
Sbjct: 83 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLKRDKLTRXXX 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G LL I+EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLAATD-VVLVSAEKGHGFDTLLEKIEELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E AD ++
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKADALY 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+ G LQPP +E G KL V T + DI +GLGW ++ +G A +
Sbjct: 298 EKQAGFVLQPP------TEEGMKTLPKL-VPYTFTVKDKADIVFSGLGWVTIP-EGGAKV 349
Query: 600 TLWTYDGIEITLREPLV 616
T W +G+ T+R LV
Sbjct: 350 TAWVPEGVSATIRTSLV 366
>gi|403237575|ref|ZP_10916161.1| GTPase YqeH [Bacillus sp. 10403023]
Length = 369
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 187/372 (50%), Gaps = 39/372 (10%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
+C RC L++Y NEV + + D DF +++ G+ N+ ++V +VD DF+G
Sbjct: 36 VICQRCFKLKHY----NEVQDVSLTDDDF-----LKILHGIGSTNS-LIVKIVDIFDFNG 85
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
S L D + +LVG KVDLLP V +L W++ ++
Sbjct: 86 --------SWLPGLHRFVGDNTI-------LLVGNKVDLLPKSVKQKKLINWMKESSREL 130
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK-EGV 424
G ++ V+L+SA K G++ + I+ + +V+V+G N GKST IN K+ G
Sbjct: 131 GLKPVD-VFLISAEKGTGIKEVAEAIEHYRFGK-DVYVVGCTNVGKSTFINRLIKEFSGE 188
Query: 425 KVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKEL 484
K +T + PGTTL I+ I L + L+DTPG+++ H M+ +++ + K++ +KE+
Sbjct: 189 KEDFITTSHFPGTTLDIIDIP--LDEEHSLFDTPGIINHHQMAHFVSKQDLKVITPKKEI 246
Query: 485 QPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+P+ +++ Q + GGL R D + ++ S +++H K+ENADE+++NH G
Sbjct: 247 KPKVFQLNEQQTLFFGGLARFDFVTGNRQSF--VCHFSNLLNIHRTKLENADELYQNHKG 304
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
L PP G+ E + + DI +GLGW ++ + + +
Sbjct: 305 ELLNPP-GESELDEFPPLIAHEFMIKEAK-----TDIVFSGLGWVTIN-EPQTKIVAHVP 357
Query: 605 DGIEITLREPLV 616
G+ + +R+ L+
Sbjct: 358 KGVGVMVRKSLI 369
>gi|449947225|ref|ZP_21807268.1| GTP-binding protein YqeH [Streptococcus mutans 11SSST2]
gi|449168888|gb|EMB71686.1| GTP-binding protein YqeH [Streptococcus mutans 11SSST2]
Length = 368
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 186/376 (49%), Gaps = 41/376 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E G++ C RC LR+Y NE+ + I D DF +L+ G++ A +VV V+D
Sbjct: 34 ESGKI-YCQRCFRLRHY----NEITDVHISDDDF-----LKLLHEVGDSRA-LVVNVIDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G S+ L+ + L +LVG K D+LP V ++ +W+
Sbjct: 83 FDFNG--------SVIPGLQRFISSSDL-------LLVGNKADILPKSVKSGKITQWLME 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
A G L+ + L SA+ ++ L+A I+EL R +V+V+G N GKSTLIN +
Sbjct: 128 CAHEEGLRPLD-LILTSAQNKWAIKELIAKIEELRQGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ + +T + PGTTL + I L + ++DTPG++H H M+ L+ K +
Sbjct: 186 EITGDKNIITTSRFPGTTLDKIEIP--LNDGSYIFDTPGIIHRHQMAHYLSDKALKYISP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GGL R D + T + N+ LH K+ AD +
Sbjct: 244 KKEIKPKTYQLNPEQTLFLGGLARFDYVTGDKQGF--TAYFDNNLKLHRTKLAGADAFYD 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H+G L PP ++ A+ + + + D+ +GLGW + + G A +
Sbjct: 302 KHIGSLLTPPDKKEMAA-FPKLVRHEFTIKEKT------DLVFSGLGW--IRINGRAKIA 352
Query: 601 LWTYDGIEITLREPLV 616
W +G+ + R+ L+
Sbjct: 353 AWAPEGVAVVTRKSLI 368
>gi|50913635|ref|YP_059607.1| GTP-binding protein YqeH [Streptococcus pyogenes MGAS10394]
gi|50902709|gb|AAT86424.1| GTP-binding protein [Streptococcus pyogenes MGAS10394]
gi|94543275|gb|ABF33323.1| GTP-binding protein [Streptococcus pyogenes MGAS10270]
Length = 372
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 188/378 (49%), Gaps = 41/378 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+ + I D +F RL+ G+++A +VV V+D
Sbjct: 34 ETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LRLLHEVGDSDA-LVVNVIDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G ++ + + +D ++LVG K D+LP V ++ +W+
Sbjct: 83 FDFNGSIIPGLSRFI------SGND---------VLLVGNKKDILPKSVKDGKVTQWLAE 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G L+ V L SA+ +++L+ I EL R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGLRPLD-VMLTSAQNKYAIKDLIERINELRNGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL + I L ++DTPG++H H M+ L+ E K+V
Sbjct: 186 EITGNKDVITTSRFPGTTLDKIEIP--LDDGTFIFDTPGIIHRHQMAHYLSPKELKIVSP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GGL R D + T + + LH K+ A+ +
Sbjct: 244 KKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TAFFDNQLELHRTKLAGANAFYD 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL-GLK-GEAS 598
HVG L PP G+ + + + +DI +GLGW + G K +A
Sbjct: 302 KHVGTLLTPP-GKKELTAFPKLVRHEFTID------QKMDIVFSGLGWIRVNGQKDSKAI 354
Query: 599 LTLWTYDGIEITLREPLV 616
+ W +G+ + +R+ ++
Sbjct: 355 VAAWAPEGVAVIVRKAII 372
>gi|334137654|ref|ZP_08511083.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. HGF7]
gi|333604818|gb|EGL16203.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. HGF7]
Length = 371
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 190/379 (50%), Gaps = 36/379 (9%)
Query: 238 AQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMV 297
AQ + E +C RC ++NY NE + + DF +L+ G+ A +V+ +
Sbjct: 29 AQALEKEPVICQRCFRIKNY----NEASSITLNQDDF-----LKLLGHVGHKEA-LVINI 78
Query: 298 VDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
VD DF+G SL L A+ P ++LV K+DLLP + R+ W
Sbjct: 79 VDIFDFEG--------SLISGL------ARFVGGNP-IILVVNKIDLLPKVTNWNRIVNW 123
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
VR +AK G K+ V L SA+K++G +L + E + +V+V+GA N GKSTLIN
Sbjct: 124 VRKQAKEQGL-KVVEVVLCSAKKNMGFDRVLQAVDEHRNGK-DVYVVGATNVGKSTLINR 181
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
S+LT + PGTTL ++ I L + DTPG+++ H ++ +++ +
Sbjct: 182 LISDYSDLDSELTTSQYPGTTLDMVEIP--LDDGHFIIDTPGIVYKHRLTELVSKKDLGK 239
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
+ K L+P Y++ GQ + G L R D + ++ T+++S + +H K+E ADE
Sbjct: 240 LMPGKPLKPMVYQLNEGQTLFFGSLARFDFVRGERQSF--TIYSSGAIPIHRTKLEKADE 297
Query: 538 IWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEA 597
++ NH G L PP+ +D EL + + +S +D+ +GLGW + + A
Sbjct: 298 LYANHKGTLLTPPVVKD-LEELPPLVKQTIHISKG----KKLDVLISGLGWIKINSEAGA 352
Query: 598 SLTLWTYDGIEITLREPLV 616
L + G++I R+ L+
Sbjct: 353 ELAVHVPKGVKIVQRDSLI 371
>gi|89100814|ref|ZP_01173666.1| GTP-binding protein [Bacillus sp. NRRL B-14911]
gi|89084460|gb|EAR63609.1| GTP-binding protein [Bacillus sp. NRRL B-14911]
Length = 367
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 186/373 (49%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E VC RC L++Y NEV + + D DF +++ G ++A ++V +VD DF
Sbjct: 33 EAIVCQRCFRLKHY----NEVQDVSLTDDDF-----LKILNEIGRSDA-LIVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L + K++LVG K DLLP V +L W++ +K
Sbjct: 83 NG--------SWLPGLHRFTGNN-------KVLLVGNKADLLPKSVKRNKLINWMKQESK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V+LVSA K ++ + + I E + +V+V+G N GKST IN K+
Sbjct: 128 NLGL-RPEDVFLVSAAKGQSIQEVASAIDEYREGK-DVYVVGCTNVGKSTFINRILKEVT 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL I+ I L L DTPG+++ H M+ +++ + K++ +KE
Sbjct: 186 GEGDIITTSHFPGTTLDIIEIP--LEDGKALVDTPGIINHHQMAHFVDKRDFKVIMPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P+ Y++ GQ + GGL R D S + V S +++H K+ENADE+++ H
Sbjct: 244 IKPKVYQLNEGQTLFFGGLARFDFISGSRQAFICHV--SNEINIHRTKLENADELYEKHA 301
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP R ++ + + L + DI +GLGW ++ G + +
Sbjct: 302 GEMLTPP----RPEQMDEFPE--LVRHEFTVKEGKTDIVISGLGWVTVSEPG-TKVAAYV 354
Query: 604 YDGIEITLREPLV 616
G++ +R+ L+
Sbjct: 355 PKGVQAMVRKSLI 367
>gi|126653886|ref|ZP_01725733.1| YqeH [Bacillus sp. B14905]
gi|126589611|gb|EAZ83750.1| YqeH [Bacillus sp. B14905]
Length = 367
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 180/375 (48%), Gaps = 42/375 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
+ +C RC L+NY NE+ + D DF R++ G++V +VD DF
Sbjct: 33 DAVICQRCFRLKNY----NEIQPVSLTDDDFLRILNGL------GTQQGLIVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L + K P L L+ K DLLP V P ++ W++ AK
Sbjct: 83 NG--------SWLPGLH------RFVGKNPVL-LIANKADLLPKSVKPKKVINWLKREAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
A G ++ V LVSA K G+ + I E + NV+V+G N GKST IN K+
Sbjct: 128 ALGLQPVD-VLLVSAHKGKGMAEAMEAIDEYRQGQ-NVYVVGCTNVGKSTFINRIIKQAT 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L + LYDTPG+++ H M+ ++ E K + +KE
Sbjct: 186 GEGEVITTSHFPGTTLDMIEIP--LDDGSALYDTPGIINHHQMAHHIDSSELKYIMPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P+ Y+ GQ + +G L R D Q T+ + ++ +H K+E AD ++ H
Sbjct: 244 IKPKVYQQNAGQTLFIGALARFDFIQGDRSAF--TIHVANDLPIHRTKLEKADMLYAEHK 301
Query: 544 GIRLQPPIGQ--DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTL 601
G L PP + D+ L + +K + T D+ +GLGW ++ +
Sbjct: 302 GELLAPPTAEFIDQLPPL-VRHEFSIKEAKT-------DVVFSGLGWITVQ-HANVVVAA 352
Query: 602 WTYDGIEITLREPLV 616
+ G+++++R L+
Sbjct: 353 YAPKGVQVSIRPSLI 367
>gi|418228253|ref|ZP_12854870.1| hypothetical protein SPAR135_1637 [Streptococcus pneumoniae
3063-00]
gi|353880648|gb|EHE60463.1| hypothetical protein SPAR135_1637 [Streptococcus pneumoniae
3063-00]
Length = 368
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 192/391 (49%), Gaps = 55/391 (14%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G++++
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDS- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIDIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ITGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDV-NGIDIAAAG 585
LH K+E A + + HVG L PP ++ K+ K+ +++ + D+ +G
Sbjct: 288 LHRTKLEGASDFYDKHVGTLLTPPNSKE--------KEEFPKLVQHVFNIKDKTDLVISG 339
Query: 586 LGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
LGW + + G A + +W +G+ + +R+ ++
Sbjct: 340 LGW--IRVTGIAKVAVWAPEGVAVVIRKAII 368
>gi|354806742|ref|ZP_09040222.1| ribosome biogenesis GTPase YqeH [Lactobacillus curvatus CRL 705]
gi|354514717|gb|EHE86684.1| ribosome biogenesis GTPase YqeH [Lactobacillus curvatus CRL 705]
Length = 377
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 190/379 (50%), Gaps = 45/379 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E G++ C RC LR+Y NE+++ + D DF L+ G+++A ++V VVD
Sbjct: 41 ETGQL-YCQRCFRLRHY----NEISDIKLNDDDF-----LALLNQIGDSDA-LIVNVVDI 89
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G SL L D + +LVG KVD+LPS ++P ++ W++
Sbjct: 90 FDFNG--------SLIPGLHRFIGDNPV-------ILVGNKVDILPSALNPNKVINWIQK 134
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
AK G + + LVSA+K V LLA I+ R +V+V+G N GKSTLIN K
Sbjct: 135 EAKEHGLHPVETM-LVSAKKGNSVDELLAVIERERKGR-DVYVVGVTNVGKSTLINRIIK 192
Query: 421 KEGVKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
+ G+ S +T + PGTTL + I + L DTPG++H M+ L+ + +++
Sbjct: 193 QTGILDSDVITTSQFPGTTLDRIDIP-LYEDDHALIDTPGIMHAQQMAHYLHDKDLRLIA 251
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+K ++P+ Y++ Q + +GGL R D Q + + + +H K+ENAD+ +
Sbjct: 252 PQKRIKPKVYQLNEQQTLFLGGLARFDFIQGARHGF--VGYFDNELYIHRTKLENADQFY 309
Query: 540 KNHVGIRLQPPIGQDRAS--ELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEA 597
+G LQPP +D A EL ++ + S D+ AGLGW + L
Sbjct: 310 AKQLGDMLQPPHPEDLADFPELQRYEFSTKQKS---------DLVFAGLGWIT--LPENV 358
Query: 598 SLTLWTYDGIEITLREPLV 616
+ + G+ + +R+ L+
Sbjct: 359 VVAGYAPKGVSVMIRKALI 377
>gi|417934231|ref|ZP_12577551.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis bv. 2 str.
F0392]
gi|340770801|gb|EGR93316.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis bv. 2 str.
F0392]
Length = 368
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 187/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTSSAKVAVWAPEGVAVVTRKAII 368
>gi|319651635|ref|ZP_08005762.1| GTP-binding protein [Bacillus sp. 2_A_57_CT2]
gi|317396702|gb|EFV77413.1| GTP-binding protein [Bacillus sp. 2_A_57_CT2]
Length = 368
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 182/373 (48%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NEV + + D DF +++ G ++A ++V +VD DF
Sbjct: 34 ETIICQRCFRLKHY----NEVQDVSLTDDDF-----LKILNEIGQSDA-LIVKIVDIFDF 83
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG KVDLLP V +L W++ +K
Sbjct: 84 NGSWLPGLHRFVGNN---------------KILLVGNKVDLLPKSVKTNKLINWMKQESK 128
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K VYL SA K + + A I + +V+V+G N GKST IN K+
Sbjct: 129 QLGL-KPEEVYLASAAKGYSINEIAAAIDHYREGK-DVYVVGCTNVGKSTFINRILKEVT 186
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL I+ I L L DTPG+++ H M+ +++ + K++ +KE
Sbjct: 187 GEGDVITTSHFPGTTLDIIEIP--LSDGKALVDTPGIINHHQMAHYVDKRDLKVITPKKE 244
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P+ Y++ Q + GGL R D + S +++H K E ADE+++NH
Sbjct: 245 IKPKVYQLNEAQTLFFGGLARFDYIAGGRRSF--VCHFSNELTIHRTKTEKADELYRNHA 302
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP R ++ T+ + L + DI +GLGW ++ +G A + +
Sbjct: 303 GEMLTPP----REEQMETFPE--LVKHEFTIKEPKTDIVFSGLGWITVN-EGGAKVAAYV 355
Query: 604 YDGIEITLREPLV 616
G+ +R+ L+
Sbjct: 356 PKGVHAMIRKSLI 368
>gi|419460561|ref|ZP_14000489.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02270]
gi|379530697|gb|EHY95936.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02270]
Length = 368
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 187/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|383937703|ref|ZP_09990947.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudopneumoniae
SK674]
gi|418968494|ref|ZP_13520084.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383352598|gb|EID30283.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383715431|gb|EID71393.1| ribosome biogenesis GTPase YqeH [Streptococcus pseudopneumoniae
SK674]
Length = 368
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 187/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GE+ C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEI-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV VVD DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + H+G L PP +++ +D V + D+ +GL
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEK-------EDFPKLVQHVFNIKDKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + +R+ ++
Sbjct: 341 GW--IRVTGTAKVAVWAPEGVAVVIRKAII 368
>gi|304403895|ref|ZP_07385557.1| ribosome biogenesis GTPase YqeH [Paenibacillus curdlanolyticus YK9]
gi|304346873|gb|EFM12705.1| ribosome biogenesis GTPase YqeH [Paenibacillus curdlanolyticus YK9]
Length = 375
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 187/372 (50%), Gaps = 40/372 (10%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFDG 305
+C RC ++NY N+ + I DF R++ G A+ +VV +VD DF+G
Sbjct: 42 ICQRCFRIKNY----NDASTVTIDQDDFLRLLG-------GIASTDSLVVHIVDLFDFEG 90
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
S+ L+ + P L++V K+DLLP V+ R+ WV+ +AK
Sbjct: 91 --------SVISGLQ------RFVGSNPVLLVV-NKIDLLPKAVNYNRIRNWVQQQAKEQ 135
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G ++ V L SA++++G ++ I+ G R +V+V+GA N GKSTLIN +
Sbjct: 136 GLKTVD-VVLCSAKRNIGFDRVVEAIEHFRGRR-DVYVVGATNVGKSTLINRIIQDYSDL 193
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
++LT + PGTTL + I L + DTPG+++ H M+ + R + + K ++
Sbjct: 194 DAELTTSRYPGTTLDAVHIP--LDDGKSIIDTPGIVYSHRMTELVPRSVLQAILPDKPIK 251
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P Y++ GQ + VG L R D ++ T++ S + +H K+E A+E++ NH G+
Sbjct: 252 PLVYQLNEGQTMFVGALARFDFVSGDRQSF--TLYISNGLEVHRTKLERAEELYANHKGV 309
Query: 546 RLQPPIGQDRASELGTWKDRKLKV-SGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
L PP + EL W L++ G +DV +GLGW + A + ++
Sbjct: 310 LLSPP-SVEELDELPAWTRHSLRIPRGGDYDV-----FVSGLGWMQVNGTSGALVDVYVP 363
Query: 605 DGIEITLREPLV 616
G+++ +R+ L+
Sbjct: 364 KGVKVLVRDSLM 375
>gi|307710602|ref|ZP_07647036.1| conserved hypothetical protein [Streptococcus mitis SK564]
gi|307618647|gb|EFN97789.1| conserved hypothetical protein [Streptococcus mitis SK564]
Length = 368
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 185/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKQAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + HVG L PP +++ +D V D+ +GL
Sbjct: 288 LHRTKLEGASAFYNKHVGTLLTPPNSKEK-------EDFPKLVQHVFNIKEKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + R+ ++
Sbjct: 341 GW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|417849907|ref|ZP_12495822.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK1080]
gi|339455240|gb|EGP67847.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK1080]
Length = 368
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 185/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + HVG L PP +++ +D V D+ +GL
Sbjct: 288 LHRTKLEGASAFYDKHVGTLLTPPNSKEK-------EDFPKLVQHVFNIKEKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + R+ ++
Sbjct: 341 GW--IRVIGTAKVAVWAPEGVAVVTRKAII 368
>gi|418976181|ref|ZP_13524067.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK575]
gi|383351855|gb|EID29618.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK575]
Length = 368
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 186/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--IAGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + HVG L PP +++ +D V D+ +GL
Sbjct: 288 LHRTKLEGASAFYDKHVGTLLTPPNSKEK-------EDFPKLVQHVFNIKEKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + R+ ++
Sbjct: 341 GW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|374324962|ref|YP_005078091.1| hypothetical protein HPL003_25760 [Paenibacillus terrae HPL-003]
gi|357203971|gb|AET61868.1| hypothetical protein HPL003_25760 [Paenibacillus terrae HPL-003]
Length = 375
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 186/373 (49%), Gaps = 36/373 (9%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC ++NY NE + + +F +L+ G+ +A +V+ +VD DF
Sbjct: 39 EPVICQRCFRIKNY----NETSSVAVDQDEF-----LKLLSQIGDKDA-LVIHIVDIFDF 88
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G SL L+ + P +VL K DLLP + ++ WV+ +AK
Sbjct: 89 EG--------SLISGLQ------RFVGSNP-VVLAVNKTDLLPKVTNWNKVLNWVQKQAK 133
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + + L SA+K+ G LL + EL G R +V+V+GA N GKSTLIN +
Sbjct: 134 EQGL-RTADIVLCSAQKNQGFDRLLDVVSELRGNR-DVYVVGATNVGKSTLINRLIRDHS 191
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+LT + PGTTL ++ I L + DTPG+++P S ++R + + K
Sbjct: 192 DMEQELTTSRYPGTTLDMVNIP--LDDGKHIIDTPGIVYPWRFSEIVSRQDLSAIMPDKP 249
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+P Y++ GQ + GG+ R D + ++ T + + + +H K+E AD+++++H
Sbjct: 250 LKPAAYQLDPGQTLFFGGMARFDFVEGQHQSF--TCYINGGLKIHRTKLERADQLFEDHA 307
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP +D+ +++ W + +V S +DI +GLGW + + A + +
Sbjct: 308 GELLSPPT-RDQLADMPEWTRHEFRVPRKS----QLDIYISGLGWIRVNSENGALVAVHA 362
Query: 604 YDGIEITLREPLV 616
GI + LR L+
Sbjct: 363 PRGIRVLLRPSLI 375
>gi|417793547|ref|ZP_12440821.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK255]
gi|334272686|gb|EGL91046.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK255]
Length = 368
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 187/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G++++
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDS- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASTFYDKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|365850841|ref|ZP_09391295.1| ribosome biogenesis GTPase YqeH [Lactobacillus parafarraginis
F0439]
gi|363718090|gb|EHM01445.1| ribosome biogenesis GTPase YqeH [Lactobacillus parafarraginis
F0439]
Length = 378
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 202/425 (47%), Gaps = 52/425 (12%)
Query: 195 EDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAE---RKKKAREAQKEKGEVTVCARC 251
E D+ +DG VG G +K + ++K+E K A E + GEV C RC
Sbjct: 3 ETDIIVDGQVVHCVGCG---------AKVQTVNKSELGYTPKSALEKGLQNGEV-YCQRC 52
Query: 252 HSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRA 311
LR+Y NE+A + D DF +++ S +A +++ VVD D +G
Sbjct: 53 FRLRHY----NEIAPVSLSDDDFLKLLT------SISATDSLILYVVDIFDVNG------ 96
Query: 312 AKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLN 371
S+ L D + +LVG K+D+LP + ++ W+R +A A G ++
Sbjct: 97 --SMISGLHRFVGDNPV-------ILVGNKLDVLPKSLKKRKVRDWLRQQANAAGIRPID 147
Query: 372 GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTE 431
V L+SA+ + V +LL I++ + +V+V+G N GKSTLIN ++ +T
Sbjct: 148 -VELISAKTNYDVDHLLDQIEKYRNGK-DVYVVGVTNVGKSTLINGIIRQSTGIKELITT 205
Query: 432 APIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRV 491
+ PGTTL RI L L DTPG++ P M+ L E +V +K ++P+ Y++
Sbjct: 206 SRFPGTTLD--RIDIPLDDGHSLVDTPGIIQPEQMAHHLVGKELNLVTPQKTIKPKGYQL 263
Query: 492 KGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPI 551
Q + G+ R D + TV+A N+ LH K+ENAD + +H+G L PP
Sbjct: 264 NPAQTLFFAGVARFDYVTGDDREGF-TVYAENNLYLHRTKLENADSFYADHLGGLLNPP- 321
Query: 552 GQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITL 611
++R ++ + + K + S D+ GLGW + + + W G+ + L
Sbjct: 322 SEERKADFPALERHEFKTTQKS------DVVLEGLGWVT--VPAGVVVAGWAPKGVAVLL 373
Query: 612 REPLV 616
R ++
Sbjct: 374 RPAMI 378
>gi|148269224|ref|YP_001243684.1| HSR1-like GTP-binding protein [Thermotoga petrophila RKU-1]
gi|147734768|gb|ABQ46108.1| GTP-binding protein, HSR1-related [Thermotoga petrophila RKU-1]
Length = 363
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 185/384 (48%), Gaps = 47/384 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
++ E + E+G +C RC +++YG++ E + ++DF + + L
Sbjct: 23 REVYERRLEEGREILCQRCFRMKHYGKL-----EPVEFNWDFKNQLKSYL------GGFD 71
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
VVV V+D DF+G + + A+ L K +++ KVDLLP V+
Sbjct: 72 VVVWVIDIFDFEGTYREDIAEIL---------------KGKRVIYAINKVDLLPRVVTVK 116
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+ WV+ R + + + +VSA K G+ +L+ ++ L V+G N GKS
Sbjct: 117 EIKEWVKKRIRVHNP---DDIRIVSAEKSFGLSSLVKYLSLLTD---KALVVGVTNVGKS 170
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
+L+N E T +P PGTTLGILR + A LYDTPG++ + L+
Sbjct: 171 SLMNKICTHEN------TISPFPGTTLGILR-RKVREANLYLYDTPGIMTNDRILDLLDS 223
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ QK V R+EL +T++ G+ + +GGL R D+ + + +++S V+ H K
Sbjct: 224 ECQKRVLPREELSRKTFKPDNGRTIFMGGLCRFDIHFETEKNPIFLLFSSKEVTFHETKR 283
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
E ADE+ +N +G L PP + WK + G ++A AGLGW S+
Sbjct: 284 ERADELMRNRLGDLLIPPCSKTEFENF-KWKREIFTLK------EGEELAVAGLGWMSVR 336
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
+G ++ + D +++ +RE LV
Sbjct: 337 -RGPFTVEVTVPDNVKLVVREALV 359
>gi|229163284|ref|ZP_04291238.1| hypothetical protein bcere0009_40520 [Bacillus cereus R309803]
gi|228620191|gb|EEK77063.1| hypothetical protein bcere0009_40520 [Bacillus cereus R309803]
Length = 368
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 188/376 (50%), Gaps = 43/376 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGKSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ G + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + ++ K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKESLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 244 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 301
Query: 543 VGIRLQPPIGQDRAS--ELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
G L PP ++ A+ EL + + ++ T D+ +GLGW ++ G A +
Sbjct: 302 AGDLLSPPTPEELANIPELVKY-EFNIREPKT-------DVVFSGLGWVTVNEPG-AKIV 352
Query: 601 LWTYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 353 AHVPKGVSVSLRKSLI 368
>gi|408790073|ref|ZP_11201706.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus florum 2F]
gi|408520647|gb|EKK20682.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus florum 2F]
Length = 376
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 172/359 (47%), Gaps = 40/359 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E G C RC LR+Y NE+ + D +F R++ +R+ +
Sbjct: 35 KSALEKGLASGGDLYCQRCFRLRHY----NEIQPVALADDEFLRLL-SRIRE-----TKA 84
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV V+D D +G SL L+ D + + VG KVDLLP+ P
Sbjct: 85 LVVYVIDIFDVNG--------SLISGLQRFVGDNPI-------LAVGNKVDLLPASFKPK 129
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ W+R G + + LVSA+ + V LLA + + A R +V+V+G N GKS
Sbjct: 130 KMKDWLRQMLNQAGLRPV-AIELVSAKTNQAVDQLLAAVNQAANGR-DVYVVGVTNVGKS 187
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN ++ +T + PGTTL +++I L +L DTPG++ M+ L
Sbjct: 188 TLINQIIRESSGIKDVITTSKFPGTTLDLIKIP--LDNGRELIDTPGIIQESQMAHYLQP 245
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K V +K ++PR+Y++ GQ + +G L R D Q TV+A NV +H K+
Sbjct: 246 ADLKYVTPQKRIKPRSYQLNPGQTLFLGALGRFDFIQGQKSGF--TVFADNNVMVHRTKL 303
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
ENA + + H G L PP G L + + KV+ TS D+ GLGW ++
Sbjct: 304 ENATDFFAKHAGELLTPPTGNTTVQPL---QRHEFKVTDTS------DLVFEGLGWVTV 353
>gi|288906055|ref|YP_003431277.1| GTP-binding protein [Streptococcus gallolyticus UCN34]
gi|306832095|ref|ZP_07465249.1| ribosome biogenesis GTPase YqeH [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325979020|ref|YP_004288736.1| GTP-binding protein engA [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386338497|ref|YP_006034666.1| putative GTPase [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
gi|288732781|emb|CBI14355.1| putative conserved GTP-binding protein [Streptococcus gallolyticus
UCN34]
gi|304425534|gb|EFM28652.1| ribosome biogenesis GTPase YqeH [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325178948|emb|CBZ48992.1| GTP-binding protein engA [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334281133|dbj|BAK28707.1| putative GTPase [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
Length = 372
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 191/393 (48%), Gaps = 55/393 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GE+ C RC LR+Y NE+ + I D +F +L+ G+++A
Sbjct: 26 KAALEKGLESGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV VVD DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVVDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V +++ +W+ RA G ++ V L SA+ +++L+ I++L R +V+V+G
Sbjct: 114 KSVKDSKVTQWLTERAHEEGLRPVD-VILTSAQNHQAIKDLIEKIEKLRRGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN K+ + +T + PGTTL + I L + ++DTPG++H H M
Sbjct: 172 TNVGKSTLINAIIKEITGEKDIITTSRFPGTTLDKIEIP--LDDGSYIFDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K + +KE++P+TY++ Q + + GL R D + T + N+
Sbjct: 230 AHYLGDKNLKYISPKKEIKPKTYQLNPEQTLFLAGLGRFDFISGDKQGF--TAYFDNNLK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNG-IDIAAAG 585
LH K+ AD + HVG L PP + EL + K+ + + +D+ +G
Sbjct: 288 LHRTKLAGADAFYDKHVGSLLTPPTDK----ELADFP----KLVRHEFTIKAKMDVVYSG 339
Query: 586 LGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
LGW + ++ + + W +G+ + LR+ L+
Sbjct: 340 LGWIRIKASQDSPVKIAAWAPEGVAVLLRKALI 372
>gi|322377769|ref|ZP_08052258.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. M334]
gi|321281192|gb|EFX58203.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. M334]
Length = 368
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 187/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|229031986|ref|ZP_04187971.1| hypothetical protein bcere0028_40310 [Bacillus cereus AH1271]
gi|228729341|gb|EEL80333.1| hypothetical protein bcere0028_40310 [Bacillus cereus AH1271]
Length = 368
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 184/378 (48%), Gaps = 47/378 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGKSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ G + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + ++ K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKESLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 244 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 301
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN----GIDIAAAGLGWFSLGLKGEAS 598
G L PP + EL D ++ N D+ +GLGW ++ G A
Sbjct: 302 AGDLLSPPTPE----ELENMPDL------VKYEFNIREPKTDVVFSGLGWVTVNESG-AK 350
Query: 599 LTLWTYDGIEITLREPLV 616
+ G+ ++LR+ L+
Sbjct: 351 IVAHVPKGVSVSLRKSLI 368
>gi|312863524|ref|ZP_07723762.1| ribosome biogenesis GTPase YqeH [Streptococcus vestibularis F0396]
gi|311101060|gb|EFQ59265.1| ribosome biogenesis GTPase YqeH [Streptococcus vestibularis F0396]
Length = 372
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 191/401 (47%), Gaps = 47/401 (11%)
Query: 219 ERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVI 278
E +K + A KKA E GE+ C RC LR+Y NE+ + I D +F
Sbjct: 16 EDKEKAGFTPASSIKKAEET----GEL-YCQRCFRLRHY----NEIVDVHITDDEF---- 62
Query: 279 ATRLMKPSGNANAGVVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVL 337
+L+ G+++A +VV VVD DF+G + P + D ++L
Sbjct: 63 -LKLLHEVGDSDA-LVVNVVDIFDFNGSIIPG------LSRFVSGND----------VLL 104
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
VG K D+L V ++ +W+ RA G ++ V L SA+ ++ L+ I++L
Sbjct: 105 VGNKKDILSKSVKDGKVTQWLTERAHEEGMRPVD-VMLTSAQNHHAIKELIQRIEKLRKG 163
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
R +V+V+G N GKSTLIN K+ +T + PGTTL + I L ++DT
Sbjct: 164 R-DVYVVGVTNVGKSTLINAIIKEITGDKDIITTSRFPGTTLDKIEIP--LDDGTYIFDT 220
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PG++H H M+ L+ + K V +KE++P+TY++ Q + +GGL R D +
Sbjct: 221 PGIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNASQTLFLGGLGRFDFIDGDKQGF-- 278
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
T + N+ LH K+E AD + HVG L PP G + + V +
Sbjct: 279 TAFFDNNLKLHRTKLEGADAFYDKHVGSLLMPP-GPKELANFPKLVRHEFTVKDKT---- 333
Query: 578 GIDIAAAGLGWFSLGLKGE--ASLTLWTYDGIEITLREPLV 616
DI +GLGW + K + + W +G+ + +R+ ++
Sbjct: 334 --DIVFSGLGWIRVQGKADQPTIVAAWAPEGVGVVVRKAII 372
>gi|335029055|ref|ZP_08522567.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis SK1076]
gi|334269456|gb|EGL87873.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis SK1076]
Length = 368
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 188/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKAGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIEKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--IAGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASDFYDKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|385260249|ref|ZP_10038398.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. SK140]
gi|385192169|gb|EIF39579.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. SK140]
Length = 368
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 187/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ +R ++ I+ R +V+V+G
Sbjct: 114 KSVKQGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIREVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--IAGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|270293291|ref|ZP_06199500.1| GTP-binding protein [Streptococcus sp. M143]
gi|270278140|gb|EFA23988.1| GTP-binding protein [Streptococcus sp. M143]
Length = 368
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 188/385 (48%), Gaps = 43/385 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDIQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV V+D DF+G + P + D ++LVG K D+LP V P
Sbjct: 75 LVVNVIDIFDFNGSVIPG------LLRFVSGND----------VLLVGNKKDILPKSVKP 118
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G N GK
Sbjct: 119 GKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGK 176
Query: 412 STLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
STLIN ++ + +T + PGTTL + I L + +YDTPG++H H M+ L
Sbjct: 177 STLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAHYLT 234
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
K V +KE++P+TY++ Q + +GGL R D S E T + + LH K
Sbjct: 235 AKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELKLHRTK 292
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+E A + H+G L PP +++ +D V + D+ +GLGW +
Sbjct: 293 LEGASAFYDKHLGTLLTPPNSKEK-------EDFPKLVQHVFNIKDKTDLVISGLGW--I 343
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ G A + +W +G+ + R+ ++
Sbjct: 344 RVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|417915755|ref|ZP_12559360.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis bv. 2 str.
SK95]
gi|342832772|gb|EGU67062.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis bv. 2 str.
SK95]
Length = 368
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 187/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ITGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + H+G L PP +++ +D V + D+ +GL
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEK-------EDFPKLVQHVFNIKDKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + R+ ++
Sbjct: 341 GW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|308069994|ref|YP_003871599.1| hypothetical protein PPE_03243 [Paenibacillus polymyxa E681]
gi|305859273|gb|ADM71061.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length = 375
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 184/373 (49%), Gaps = 36/373 (9%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC ++NY NE + + +F +L+ G+ +A +V+ +VD DF
Sbjct: 39 EPVICQRCFRIKNY----NETSSVTVDQDEF-----LKLLSQIGDKDA-LVIHIVDIFDF 88
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G SL L+ + P ++L K DLLP + ++ WV+ +AK
Sbjct: 89 EG--------SLISGLQ------RFVGSNP-VILAVNKTDLLPKVTNWNKVRNWVQKQAK 133
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + + L SA+K+ G LL + EL G R +V+V+GA N GKSTLIN +
Sbjct: 134 EQGL-RTEEIVLCSAKKNQGFDRLLDVVSELRGNR-DVYVVGATNVGKSTLINRLIRDYS 191
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+LT + PGTTL ++ I L + DTPG+++P S ++R + + K
Sbjct: 192 DMEQELTTSRYPGTTLDMVNIP--LDDGKHIIDTPGIVYPWRFSEIVSRQDLSAIMPDKP 249
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+P Y++ GQ + GG+ R D + ++ T + + + +H K+E AD+++ +H
Sbjct: 250 LKPAAYQLDAGQTLFFGGMSRFDFVEGQHQSF--TCYINGGLKIHRTKLERADQLFADHA 307
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP +D+ +E+ W + +V S DI +GLGW + + A + +
Sbjct: 308 GELLSPPT-RDQLAEMPEWTRHEFRVPRKSPS----DIYISGLGWIRVNSENGALVAVHA 362
Query: 604 YDGIEITLREPLV 616
G+ + LR L+
Sbjct: 363 PRGVRVLLRPALI 375
>gi|389815855|ref|ZP_10207103.1| GTPase YqeH [Planococcus antarcticus DSM 14505]
gi|388465578|gb|EIM07894.1| GTPase YqeH [Planococcus antarcticus DSM 14505]
Length = 367
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 187/378 (49%), Gaps = 43/378 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
EK E+ +C RC L+NY NE+ + D DF R++ G + G++V +VD
Sbjct: 31 EKEEI-ICQRCFRLKNY----NELQPVSLTDDDF-----LRILNGLGERD-GLIVKIVDI 79
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G + + + +D ++L+ K DLLP V +L W++
Sbjct: 80 FDFNGSWLPGLHRFV------GNND---------ILLIANKADLLPKSVKQHKLIHWMKQ 124
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
A+ G ++ + VSA K G+ + I++ + +V+V+G N GKST IN K
Sbjct: 125 EARKLGLQPID-ILTVSAHKGTGIPEAMEAIEKYRKGK-DVYVVGCTNVGKSTFINRVIK 182
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ + +T + PGTTL ++ I L K L+DTPG+++ H ++ L + K +
Sbjct: 183 QATGQADVITTSHFPGTTLDMIEIP--LDDKRSLFDTPGIINHHQLAHHLQTADLKQIMP 240
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++PR +++ Q + +GGL R D Q E TV + ++ +H K++NAD +++
Sbjct: 241 KKEIKPRVFQLNAEQTLFIGGLARFDFIQG--ERSSFTVHIANDLPIHRTKLDNADALYE 298
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN--GIDIAAAGLGWFSLGLKGEAS 598
H+G L PP + +KD ++ + + DI +GLGW ++ G A
Sbjct: 299 QHLGDMLAPPSAE--------YKDDFPELVRHEFSIKEAKTDIVFSGLGWITIQ-HGNAV 349
Query: 599 LTLWTYDGIEITLREPLV 616
+ G+E+ LR L+
Sbjct: 350 IAAHAPKGVEVLLRPSLI 367
>gi|417936728|ref|ZP_12580035.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis X]
gi|343400244|gb|EGV12764.1| ribosome biogenesis GTPase YqeH [Streptococcus infantis X]
Length = 368
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 186/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + H+G L PP +++ +D V + D+ +GL
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEK-------EDFPKLVQHVFNIKDKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + R+ ++
Sbjct: 341 GW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|289168472|ref|YP_003446741.1| hypothetical protein smi_1639 [Streptococcus mitis B6]
gi|288908039|emb|CBJ22879.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 368
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 187/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEKEDFPKLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W + + + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEDVAVVTRKAII 368
>gi|377831709|ref|ZP_09814679.1| GTP-binding protein YqeH [Lactobacillus mucosae LM1]
gi|377554503|gb|EHT16212.1| GTP-binding protein YqeH [Lactobacillus mucosae LM1]
Length = 371
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 186/376 (49%), Gaps = 40/376 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+A + D DF RL+ +A+A ++V VVD
Sbjct: 36 ETGEL-YCQRCFRLRHY----NEIAPVSLTDDDF-----LRLLNHIRDAHA-LIVYVVDI 84
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G SL L + ++LVG K D+LP + +L W+R
Sbjct: 85 FDFNG--------SLIPGLHRFVGNDN------PVLLVGNKEDVLPRSLRRRKLTDWLRQ 130
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
+A G ++ + LVSA+K+ + LLA I++ R +V+V+G N GKSTLIN K
Sbjct: 131 QANLAGLRPIDTL-LVSAKKNHQIDQLLAEIEKHRADR-DVYVVGVTNVGKSTLINAIIK 188
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
++ +T + PGTTL + I L KL DTPG++H M+ L+ + K+V
Sbjct: 189 QQTGVQDLITTSRFPGTTLDKIEIP--LDDGHKLVDTPGIIHQEQMAHVLSAKDLKIVAP 246
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++PRT+++ Q + +GG+ R D + I + ++ LH K+ NADE +
Sbjct: 247 QKEIKPRTFQLNDSQTIFLGGVARFDYVKGPHAGI--VAYFENSLPLHRTKLVNADEFYA 304
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H G L PP D ++ + + + S D+ GLGW + + ++
Sbjct: 305 KHCGDLLTPPTS-DEMADFPPLERHEFAIKEKS------DLVFEGLGWIT--VPAGTTVA 355
Query: 601 LWTYDGIEITLREPLV 616
W G+++ +R ++
Sbjct: 356 GWAPKGVDVLVRRAMI 371
>gi|405760389|ref|YP_006700985.1| GTP-binding protein [Streptococcus pneumoniae SPNA45]
gi|404277278|emb|CCM07787.1| GTP-binding protein [Streptococcus pneumoniae SPNA45]
Length = 368
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 187/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ GQ + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPGQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|392330686|ref|ZP_10275301.1| GTP-binding protein YqeH [Streptococcus canis FSL Z3-227]
gi|391418365|gb|EIQ81177.1| GTP-binding protein YqeH [Streptococcus canis FSL Z3-227]
Length = 372
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 191/401 (47%), Gaps = 47/401 (11%)
Query: 219 ERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVI 278
E KK + A KK E GE+ C RC LR+Y N++ + I D +F
Sbjct: 16 EDKKKAGFTPAAALKKGLET----GEL-YCQRCFRLRHY----NDITDVHITDDEF---- 62
Query: 279 ATRLMKPSGNANAGVVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVL 337
RL+ G+++A +VV VVD DF+G + P + D ++L
Sbjct: 63 -LRLLHEVGDSDA-LVVNVVDIFDFNGSIIPG------LSRFVSGND----------VLL 104
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
VG K D+LP V ++ +W+ RA G L+ V L SA+ ++ L+ I L
Sbjct: 105 VGNKKDILPKSVKDGKVTQWLVERAHEEGLRPLD-VMLTSAQNKYAIKELIERINTLRKG 163
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
R NV+V+G N GKSTLIN ++ +T + PGTTL + I L ++DT
Sbjct: 164 R-NVYVVGVTNVGKSTLINAIIQEVTGDKDVITTSRFPGTTLDKIEIP--LDDGTFIFDT 220
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PG++H H M+ L+ + K+V +KE++P+TY++ Q + +GGL R D S E
Sbjct: 221 PGIIHRHQMAHYLSAKDLKVVSPKKEIKPKTYQLNPKQTLFLGGLARFDF--ISGERQGF 278
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
T + + LH K+ AD + H+G L PP GQ A + + +
Sbjct: 279 TAFFDNELGLHRTKLTGADTFYDKHLGGLLTPP-GQKEAVDFPKLVRHEFVID------Q 331
Query: 578 GIDIAAAGLGWFSLGLKGE--ASLTLWTYDGIEITLREPLV 616
+D+ +GLGW + + E + W +G+ + +R+ ++
Sbjct: 332 KMDLVFSGLGWIRINGQKELKTKIAAWAPEGVAVLVRKAII 372
>gi|75761260|ref|ZP_00741242.1| GTP-binding protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218899503|ref|YP_002447914.1| GTP-binding protein YqeH [Bacillus cereus G9842]
gi|228902861|ref|ZP_04067004.1| hypothetical protein bthur0014_40310 [Bacillus thuringiensis IBL
4222]
gi|228941502|ref|ZP_04104052.1| hypothetical protein bthur0008_41400 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228967402|ref|ZP_04128435.1| hypothetical protein bthur0004_42030 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228974432|ref|ZP_04135000.1| hypothetical protein bthur0003_41860 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981027|ref|ZP_04141329.1| hypothetical protein bthur0002_41890 [Bacillus thuringiensis Bt407]
gi|384188409|ref|YP_005574305.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402564188|ref|YP_006606912.1| GTPase YqeH [Bacillus thuringiensis HD-771]
gi|410676724|ref|YP_006929095.1| GTP-binding protein [Bacillus thuringiensis Bt407]
gi|423358628|ref|ZP_17336131.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD022]
gi|423385837|ref|ZP_17363093.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1X1-2]
gi|423527806|ref|ZP_17504251.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB1-1]
gi|423561196|ref|ZP_17537472.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-A1]
gi|434377503|ref|YP_006612147.1| GTPase YqeH [Bacillus thuringiensis HD-789]
gi|452200801|ref|YP_007480882.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|74491242|gb|EAO54476.1| GTP-binding protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|218541005|gb|ACK93399.1| GTPase family protein [Bacillus cereus G9842]
gi|228778687|gb|EEM26952.1| hypothetical protein bthur0002_41890 [Bacillus thuringiensis Bt407]
gi|228785268|gb|EEM33279.1| hypothetical protein bthur0003_41860 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228792290|gb|EEM39859.1| hypothetical protein bthur0004_42030 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228818152|gb|EEM64227.1| hypothetical protein bthur0008_41400 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228856785|gb|EEN01302.1| hypothetical protein bthur0014_40310 [Bacillus thuringiensis IBL
4222]
gi|326942118|gb|AEA18014.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401084500|gb|EJP92746.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD022]
gi|401201453|gb|EJR08318.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-A1]
gi|401635893|gb|EJS53648.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1X1-2]
gi|401792840|gb|AFQ18879.1| GTPase YqeH [Bacillus thuringiensis HD-771]
gi|401876060|gb|AFQ28227.1| GTPase YqeH [Bacillus thuringiensis HD-789]
gi|402451469|gb|EJV83288.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB1-1]
gi|409175853|gb|AFV20158.1| GTP-binding protein [Bacillus thuringiensis Bt407]
gi|452106194|gb|AGG03134.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 368
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 187/376 (49%), Gaps = 43/376 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGKSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L + K+ +LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NG--------SWLPGLHRFVGNNKV-------LLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ G + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + + K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKQSLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 244 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 301
Query: 543 VGIRLQPPIGQDRAS--ELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
G L PP ++ A+ EL + + ++ T D+ +GLGW ++ G A +
Sbjct: 302 AGDLLSPPTPEELANMPELVKY-EFNIREPKT-------DVVFSGLGWVTVNEPG-AKIV 352
Query: 601 LWTYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 353 AHVPKGVSVSLRKSLI 368
>gi|206969713|ref|ZP_03230667.1| GTPase family protein [Bacillus cereus AH1134]
gi|218233536|ref|YP_002369145.1| GTP-binding protein YqeH [Bacillus cereus B4264]
gi|228954622|ref|ZP_04116646.1| hypothetical protein bthur0006_39910 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228960605|ref|ZP_04122252.1| hypothetical protein bthur0005_40690 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229048042|ref|ZP_04193617.1| hypothetical protein bcere0027_40160 [Bacillus cereus AH676]
gi|229071842|ref|ZP_04205055.1| hypothetical protein bcere0025_40110 [Bacillus cereus F65185]
gi|229081599|ref|ZP_04214095.1| hypothetical protein bcere0023_42300 [Bacillus cereus Rock4-2]
gi|229111809|ref|ZP_04241355.1| hypothetical protein bcere0018_40530 [Bacillus cereus Rock1-15]
gi|229129616|ref|ZP_04258584.1| hypothetical protein bcere0015_40580 [Bacillus cereus BDRD-Cer4]
gi|229146907|ref|ZP_04275271.1| hypothetical protein bcere0012_40460 [Bacillus cereus BDRD-ST24]
gi|229152539|ref|ZP_04280729.1| hypothetical protein bcere0011_40750 [Bacillus cereus m1550]
gi|229180613|ref|ZP_04307954.1| hypothetical protein bcere0005_39570 [Bacillus cereus 172560W]
gi|229192548|ref|ZP_04319509.1| hypothetical protein bcere0002_41990 [Bacillus cereus ATCC 10876]
gi|296504828|ref|YP_003666528.1| GTP-binding protein YqeH [Bacillus thuringiensis BMB171]
gi|365158875|ref|ZP_09355065.1| ribosome biogenesis GTPase YqeH [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411868|ref|ZP_17388988.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3O-2]
gi|423426469|ref|ZP_17403500.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3X2-2]
gi|423432346|ref|ZP_17409350.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4O-1]
gi|423437781|ref|ZP_17414762.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4X12-1]
gi|423502979|ref|ZP_17479571.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HD73]
gi|423585185|ref|ZP_17561272.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD045]
gi|423631058|ref|ZP_17606805.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD154]
gi|423640584|ref|ZP_17616202.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD166]
gi|423650200|ref|ZP_17625770.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD169]
gi|423657291|ref|ZP_17632590.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD200]
gi|449091299|ref|YP_007423740.1| GTPase family protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|206735401|gb|EDZ52569.1| GTPase family protein [Bacillus cereus AH1134]
gi|218161493|gb|ACK61485.1| GTPase family protein [Bacillus cereus B4264]
gi|228590855|gb|EEK48713.1| hypothetical protein bcere0002_41990 [Bacillus cereus ATCC 10876]
gi|228602856|gb|EEK60336.1| hypothetical protein bcere0005_39570 [Bacillus cereus 172560W]
gi|228630905|gb|EEK87544.1| hypothetical protein bcere0011_40750 [Bacillus cereus m1550]
gi|228636506|gb|EEK92972.1| hypothetical protein bcere0012_40460 [Bacillus cereus BDRD-ST24]
gi|228653733|gb|EEL09603.1| hypothetical protein bcere0015_40580 [Bacillus cereus BDRD-Cer4]
gi|228671565|gb|EEL26863.1| hypothetical protein bcere0018_40530 [Bacillus cereus Rock1-15]
gi|228701705|gb|EEL54195.1| hypothetical protein bcere0023_42300 [Bacillus cereus Rock4-2]
gi|228711272|gb|EEL63234.1| hypothetical protein bcere0025_40110 [Bacillus cereus F65185]
gi|228723286|gb|EEL74656.1| hypothetical protein bcere0027_40160 [Bacillus cereus AH676]
gi|228799084|gb|EEM46054.1| hypothetical protein bthur0005_40690 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228805068|gb|EEM51663.1| hypothetical protein bthur0006_39910 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|296325880|gb|ADH08808.1| GTP-binding protein YqeH [Bacillus thuringiensis BMB171]
gi|363626245|gb|EHL77242.1| ribosome biogenesis GTPase YqeH [Bacillus sp. 7_6_55CFAA_CT2]
gi|401103936|gb|EJQ11913.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3O-2]
gi|401111216|gb|EJQ19115.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3X2-2]
gi|401117102|gb|EJQ24940.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4O-1]
gi|401120936|gb|EJQ28732.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4X12-1]
gi|401233828|gb|EJR40314.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD045]
gi|401264425|gb|EJR70537.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD154]
gi|401279645|gb|EJR85567.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD166]
gi|401282618|gb|EJR88517.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD169]
gi|401290034|gb|EJR95738.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD200]
gi|402459200|gb|EJV90937.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HD73]
gi|449025056|gb|AGE80219.1| GTPase family protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 368
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 187/376 (49%), Gaps = 43/376 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGKSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L + K+ +LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NG--------SWLPGLHRFVGNNKV-------LLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ G + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + + K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKQSLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 244 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 301
Query: 543 VGIRLQPPIGQDRAS--ELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
G L PP ++ A+ EL + + ++ T D+ +GLGW ++ G A +
Sbjct: 302 AGDLLSPPTPEELANMPELVKY-EFNIREPKT-------DVVFSGLGWVTVNEPG-AKIV 352
Query: 601 LWTYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 353 AHVPKGVSVSLRKSLI 368
>gi|310643106|ref|YP_003947864.1| ribosome biogenesis GTPase yqeh [Paenibacillus polymyxa SC2]
gi|309248056|gb|ADO57623.1| Ribosome biogenesis GTPase YqeH [Paenibacillus polymyxa SC2]
gi|392303906|emb|CCI70269.1| GTP-binding protein engA [Paenibacillus polymyxa M1]
Length = 375
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 183/373 (49%), Gaps = 36/373 (9%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC ++NY NE + + +F +L+ G+ +A +V+ +VD DF
Sbjct: 39 EPVICQRCFRIKNY----NETSSVTVDQDEF-----LKLLSQIGDKDA-LVIHIVDIFDF 88
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G SL L+ + P +VL K DLLP + ++ WV+ +AK
Sbjct: 89 EG--------SLISGLQ------RFVGSNP-VVLAVNKTDLLPKVTNWNKVRNWVQKQAK 133
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + + L SA+K+ G LL + EL G R +V+V+GA N GKSTLIN +
Sbjct: 134 EQGL-RTEEIVLCSAKKNQGFDRLLDVVSELRGNR-DVYVVGATNVGKSTLINRLIRDYS 191
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+LT + PGTTL ++ I L + DTPG+++P S ++R + + K
Sbjct: 192 DMEQELTTSRYPGTTLDMVNIP--LDDGKHIIDTPGIVYPWRFSEIVSRQDLSAIMPDKP 249
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+P Y++ GQ + GG+ R D ++ T + + + +H K+E AD+++ +H
Sbjct: 250 LKPAAYQLDAGQTLFFGGMARFDFVDGQHQSF--TCYINGGLKIHRTKLERADQLFADHA 307
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP +D+ +E+ W + +V S DI +GLGW + + A + +
Sbjct: 308 GELLSPPT-RDQLAEMPEWTRHEFRVPRKSPS----DIYISGLGWIRVNSENGALVAVHA 362
Query: 604 YDGIEITLREPLV 616
G+ + LR L+
Sbjct: 363 PRGVRVLLRPALI 375
>gi|419767751|ref|ZP_14293898.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK579]
gi|383352793|gb|EID30426.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK579]
Length = 368
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 186/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNIITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D S E T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + H+G L PP +++ +D + D+ +GL
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEQ-------EDFPKLIQHVFNIKEKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + R+ ++
Sbjct: 341 GW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|322374823|ref|ZP_08049337.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. C300]
gi|321280323|gb|EFX57362.1| ribosome biogenesis GTPase YqeH [Streptococcus sp. C300]
Length = 368
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 186/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEYYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L A +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGAYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + H+G L PP +++ +D V + D+ +GL
Sbjct: 288 LHRTKLEGACAFYDKHLGTLLTPPNSKEK-------EDFPKLVEHVFAIKDKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + R+ ++
Sbjct: 341 GW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|417940627|ref|ZP_12583915.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK313]
gi|343389508|gb|EGV02093.1| ribosome biogenesis GTPase YqeH [Streptococcus oralis SK313]
Length = 336
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 185/388 (47%), Gaps = 65/388 (16%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
+ GEV C RC LR+Y NE+ + + D DF +L+ G+++A +VV V+D
Sbjct: 2 DTGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA-LVVNVIDI 50
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLPSQVSPTRL 354
DF+G + LP+ V LVG K D+LP V P ++
Sbjct: 51 FDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILPKSVKPGKI 89
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
+W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G N GKSTL
Sbjct: 90 SQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTL 147
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN ++ + +T + PGTTL + I L + +YDTPG++H H M+ L
Sbjct: 148 INAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAHYLTAKN 205
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
K V +KE++P+TY++ Q + +GGL R D S E T + + LH K+E
Sbjct: 206 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDF--ISGEKQGFTAFFDNELKLHRTKLEG 263
Query: 535 ADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
A + H+G L PP +++ + T KD+ D+ +GLGW
Sbjct: 264 ASAFYDKHLGTLLTPPNSKEKEEFPKLVQHVFTIKDKT-------------DLVISGLGW 310
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ + G A + +W +G+ + R+ ++
Sbjct: 311 --IRVTGIAKVAVWAPEGVAVVTRKAII 336
>gi|229175010|ref|ZP_04302529.1| hypothetical protein bcere0006_40930 [Bacillus cereus MM3]
gi|423457416|ref|ZP_17434213.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5X2-1]
gi|228608471|gb|EEK65774.1| hypothetical protein bcere0006_40930 [Bacillus cereus MM3]
gi|401147800|gb|EJQ55293.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5X2-1]
Length = 368
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 186/376 (49%), Gaps = 43/376 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGKSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ G + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + ++ K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKESLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 244 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 301
Query: 543 VGIRLQPPIGQ--DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
G L PP + + EL + + ++ T D+ +GLGW ++ G A +
Sbjct: 302 AGDLLSPPTPEELENMPELVKY-EFNIREPKT-------DVVFSGLGWVTVNESG-AKIV 352
Query: 601 LWTYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 353 AHVPKGVSVSLRKSLI 368
>gi|227530476|ref|ZP_03960525.1| GTP-binding protein YqeH [Lactobacillus vaginalis ATCC 49540]
gi|227349581|gb|EEJ39872.1| GTP-binding protein YqeH [Lactobacillus vaginalis ATCC 49540]
Length = 375
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 178/369 (48%), Gaps = 40/369 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+A + D DF RL+ N +A ++V VVD DF+G
Sbjct: 47 CQRCFRLRHY----NEIAPVSLSDDDF-----LRLLSQIRNDDA-LIVYVVDIFDFNG-- 94
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
S+ L + P L LVG K DLLP + +L W+R +A G
Sbjct: 95 ------SIIPGLH------RFVGSNPVL-LVGNKEDLLPRSLRRPKLRDWLRQQANLAGL 141
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
++ V LVSA+K+ + LL I + R +V+ +G N GKSTL+N K++
Sbjct: 142 RPIDTV-LVSAKKNHQIDYLLEVIDKYRQGR-DVYFVGVTNVGKSTLVNQIIKRQTGIKE 199
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL + I L +L DTPG++H H M+ L+ + K V +KE++PR
Sbjct: 200 LITTSKFPGTTLDKIEIP--LDDGHQLIDTPGIIHQHQMAHVLSAKDLKYVSPQKEIKPR 257
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ Q + +GG+ R D I + N+ LH K+ NAD ++ H+G L
Sbjct: 258 TYQLDPEQTIFIGGVARFDYLTGHHAGI--IAYFDNNLPLHRTKLGNADRFYEKHLGELL 315
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
PP +D E + ++ +S S D+ GLGW + + ++ W G+
Sbjct: 316 TPPT-KDELKEFPPLERQEFHLSEKS------DVVFEGLGWIT--VPAGTTVAAWVPKGV 366
Query: 608 EITLREPLV 616
+R ++
Sbjct: 367 SSLVRRAMI 375
>gi|293374269|ref|ZP_06620597.1| ribosome biogenesis GTPase YqeH [Turicibacter sanguinis PC909]
gi|325844831|ref|ZP_08168283.1| ribosome biogenesis GTPase YqeH [Turicibacter sp. HGF1]
gi|292647102|gb|EFF65084.1| ribosome biogenesis GTPase YqeH [Turicibacter sanguinis PC909]
gi|325489018|gb|EGC91406.1| ribosome biogenesis GTPase YqeH [Turicibacter sp. HGF1]
Length = 369
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 193/387 (49%), Gaps = 48/387 (12%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A K + E+ C RC L++Y NEV + + DF ++++ G +A +V
Sbjct: 26 ASSISKMENEIIYCQRCFKLKHY----NEVQDVALTSDDF-----LKILQRVGETDA-LV 75
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLP--KLVLVGTKVDLLPSQVSPT 352
+ +VD DF G A LS+ + ++LVG KVDLLP V+ T
Sbjct: 76 INIVDIFDFSGSMV-----------------AGLSRHINGNDILLVGNKVDLLPKSVNKT 118
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L+ W+R K G L+ V LVSA K G+ L+ I++ R +V+++G N GKS
Sbjct: 119 KLNHWMRRSLKEYGLKPLD-VALVSAGKGFGIDELMEMIEKYRKGR-DVYIVGCTNVGKS 176
Query: 413 TLINTFAKK-EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
TL+N K+ + +T + PGTTL I+ I L + + DTPG+++ H ++ +
Sbjct: 177 TLVNRIIKRFTEEREDIITTSHFPGTTLDIIEIP--LDDCSAIVDTPGIINEHQLAHYVT 234
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
K + +KE++ Y++ Q + VGGL R+D + T +VT +A+ + +H K
Sbjct: 235 PKVLKEITPKKEIKAGVYQLNAEQTLFVGGLARMDFVKGE-RTSFVTHFAN-QLHIHRTK 292
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNG--IDIAAAGLGWF 589
+E AD +W G L+ P+ D D+ +++ ++ + D+ +GLGWF
Sbjct: 293 LEKADHLWATQAGAVLK-PVAMD--------NDQLMEMEKHTFHIGHEKTDLVISGLGWF 343
Query: 590 SLGLKGEASLTLWTYDGIEITLREPLV 616
+L G+ + ++ G+ + +R L+
Sbjct: 344 TLSGTGQ-DINIYAPKGVGVMIRPSLI 369
>gi|148989411|ref|ZP_01820779.1| GTP-binding protein [Streptococcus pneumoniae SP6-BS73]
gi|147925161|gb|EDK76241.1| GTP-binding protein [Streptococcus pneumoniae SP6-BS73]
Length = 368
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 187/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G++NA
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSNA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA+ G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAREEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|320547439|ref|ZP_08041726.1| GTP-binding protein [Streptococcus equinus ATCC 9812]
gi|320447916|gb|EFW88672.1| GTP-binding protein [Streptococcus equinus ATCC 9812]
Length = 372
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 187/387 (48%), Gaps = 43/387 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GE+ C RC LR+Y NE+ + I D +F +L+ G+++A
Sbjct: 26 KAALEKGLETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV VVD DF+G + P + D ++LVG K D+LP V
Sbjct: 75 LVVNVVDIFDFNGSVIPG------LSRFVSGND----------VLLVGNKKDILPKSVKT 118
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
++ +W+ RA G ++ V L SA+ +++L+ I++L R +V+V+G N GK
Sbjct: 119 GKVTQWLTERAHEEGLRPVD-VILTSAQNHQAIKDLIEKIEKLRKGR-DVYVVGVTNVGK 176
Query: 412 STLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
STLIN K+ + +T + PGTTL + I L + ++DTPG++H H M+ L
Sbjct: 177 STLINAIIKEITGEKDIITTSRFPGTTLDKIEIP--LDDGSYIFDTPGIIHRHQMAHYLG 234
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
K + +KE++P+TY++ Q + + GL R D + T + N+ LH K
Sbjct: 235 DKNLKYISPKKEIKPKTYQLNPEQTLFLAGLGRFDFISGDKQGF--TAYFDNNLKLHRTK 292
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ AD + HVG L PP ++ A E + + + +D+ +GLGW +
Sbjct: 293 LAGADAFYDKHVGSLLTPPSDKELA-EFPKLVRHEFTIK------DKMDVVYSGLGWIRI 345
Query: 592 GLKGE--ASLTLWTYDGIEITLREPLV 616
+ W +G+ + LR+ L+
Sbjct: 346 KASQAKPVKIAAWAPEGVSVVLRKALI 372
>gi|323490035|ref|ZP_08095256.1| GTPase YqeH [Planococcus donghaensis MPA1U2]
gi|323396331|gb|EGA89156.1| GTPase YqeH [Planococcus donghaensis MPA1U2]
Length = 367
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 187/378 (49%), Gaps = 43/378 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
EK E+ +C RC L+NY NE+ + D DF R++ G + G++V +VD
Sbjct: 31 EKEEI-ICQRCFRLKNY----NELQPVSLTDDDF-----LRILNGLGERD-GLIVKIVDI 79
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G + + + +D ++L+ K DLLP V +L W++
Sbjct: 80 FDFNGSWLPGLHRFV------GNND---------ILLIANKADLLPKSVKQHKLIHWMKQ 124
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
A+ G ++ V VSA + GV + I++ + +V+V+G N GKST IN K
Sbjct: 125 EARKLGLQPID-VLTVSAHRGTGVPEAMEAIEKYRKGK-DVYVVGCTNVGKSTFINRVIK 182
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ + +T + PGTTL ++ I L K L+DTPG+++ H ++ L + K +
Sbjct: 183 QATGQSDVITTSHFPGTTLDMIEIP--LDDKRSLFDTPGIINHHQLAHHLKTADLKQIMP 240
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++PR +++ Q + VGGL R D + E TV + ++ +H K+ENAD +++
Sbjct: 241 KKEIKPRVFQLNAEQTLFVGGLARFDFIKG--ERSSFTVHIANDLPIHRTKLENADALYE 298
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNG--IDIAAAGLGWFSLGLKGEAS 598
H+G L PP + +KD ++ + + DI +GLGW ++ G A
Sbjct: 299 QHLGDMLAPPSAE--------YKDEFPELVRHEFSIKDAKTDIVFSGLGWITIQ-HGNAV 349
Query: 599 LTLWTYDGIEITLREPLV 616
+ G+E+ LR L+
Sbjct: 350 VAAHAPKGVEVLLRPSLI 367
>gi|417694623|ref|ZP_12343810.1| GTPase family protein [Streptococcus pneumoniae GA47901]
gi|332201172|gb|EGJ15243.1| GTPase family protein [Streptococcus pneumoniae GA47901]
Length = 368
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 186/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G++NA
Sbjct: 26 QSALEKDLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSNA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|221232484|ref|YP_002511637.1| GTP-binding protein [Streptococcus pneumoniae ATCC 700669]
gi|415700216|ref|ZP_11457930.1| hypothetical protein CGSSp4595_1737 [Streptococcus pneumoniae
459-5]
gi|415750139|ref|ZP_11478083.1| hypothetical protein CGSSpSV35_1840 [Streptococcus pneumoniae SV35]
gi|415752954|ref|ZP_11479936.1| hypothetical protein CGSSpSV36_1553 [Streptococcus pneumoniae SV36]
gi|418079179|ref|ZP_12716401.1| hypothetical protein SPAR123_1626 [Streptococcus pneumoniae
4027-06]
gi|418081377|ref|ZP_12718587.1| hypothetical protein SPAR121_1674 [Streptococcus pneumoniae
6735-05]
gi|418124079|ref|ZP_12761010.1| hypothetical protein SPAR82_1748 [Streptococcus pneumoniae GA44378]
gi|418128623|ref|ZP_12765516.1| hypothetical protein SPAR144_1703 [Streptococcus pneumoniae NP170]
gi|418137820|ref|ZP_12774658.1| GTPase family protein [Streptococcus pneumoniae GA11663]
gi|418178799|ref|ZP_12815382.1| GTPase family protein [Streptococcus pneumoniae GA41565]
gi|419473808|ref|ZP_14013657.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13430]
gi|220674945|emb|CAR69522.1| GTP-binding protein [Streptococcus pneumoniae ATCC 700669]
gi|353746706|gb|EHD27366.1| hypothetical protein SPAR123_1626 [Streptococcus pneumoniae
4027-06]
gi|353752116|gb|EHD32747.1| hypothetical protein SPAR121_1674 [Streptococcus pneumoniae
6735-05]
gi|353795899|gb|EHD76245.1| hypothetical protein SPAR82_1748 [Streptococcus pneumoniae GA44378]
gi|353799122|gb|EHD79445.1| hypothetical protein SPAR144_1703 [Streptococcus pneumoniae NP170]
gi|353842858|gb|EHE22904.1| GTPase family protein [Streptococcus pneumoniae GA41565]
gi|353900775|gb|EHE76326.1| GTPase family protein [Streptococcus pneumoniae GA11663]
gi|379550972|gb|EHZ16068.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13430]
gi|381308601|gb|EIC49444.1| hypothetical protein CGSSpSV36_1553 [Streptococcus pneumoniae SV36]
gi|381314912|gb|EIC55678.1| hypothetical protein CGSSp4595_1737 [Streptococcus pneumoniae
459-5]
gi|381318433|gb|EIC59158.1| hypothetical protein CGSSpSV35_1840 [Streptococcus pneumoniae SV35]
Length = 368
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 187/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA+ G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAREEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|418968094|ref|ZP_13519722.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK616]
gi|383341384|gb|EID19644.1| ribosome biogenesis GTPase YqeH [Streptococcus mitis SK616]
Length = 368
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 185/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + H+G L PP +++ +D V D+ +GL
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEK-------EDFPKLVQHVFNIKEKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + R+ ++
Sbjct: 341 GW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|335040462|ref|ZP_08533590.1| ribosome biogenesis GTPase YqeH [Caldalkalibacillus thermarum
TA2.A1]
gi|334179651|gb|EGL82288.1| ribosome biogenesis GTPase YqeH [Caldalkalibacillus thermarum
TA2.A1]
Length = 365
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 185/375 (49%), Gaps = 42/375 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIP-DFDFDRVIATRLMKPSGNANAGVVVMVVDCVD 302
E +C RC +++Y +L P D D I ++ G A A +VV +VD D
Sbjct: 31 EQVICQRCFRIKHY--------NDLTPVPMDNDEFI--HILHRIGEARA-LVVKIVDLFD 79
Query: 303 FDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA 362
F+G + + + +VLV K DL P +V+ R+++WVR +A
Sbjct: 80 FNGSWLPGLMRFV---------------NFNPVVLVVNKTDLFP-RVNWVRIEQWVRRQA 123
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE 422
K GG ++ V+ SA K G++ L+ I++ G+V+V+GA N GKSTLIN K+
Sbjct: 124 KEGGLKPVDVVF-CSAEKGTGIQALMKSIEQ-HRQGGDVYVVGATNVGKSTLINQILKQA 181
Query: 423 GV-KVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIR 481
G K LT + PGTTL +++I L LYDTPG+++ H M+ + ++ K++
Sbjct: 182 GAEKAPVLTTSRFPGTTLDMIKIP--LDDGQALYDTPGVINDHQMAHYVASEDLKVILPN 239
Query: 482 KELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKN 541
K L+P+ Y++ Q + GGL RLD AS E + S + +H K+E ADE++
Sbjct: 240 KPLKPKVYQLNPRQTLFFGGLARLDF--ASGERQSFVCYMSNELPVHRTKLEKADELYSK 297
Query: 542 HVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTL 601
H+G L PP G + E G + DI +GLGW ++ G A LT
Sbjct: 298 HLGGMLSPP-GNESLKEWGPLDQHTFSLKDEP-----CDIVFSGLGWVAVKGTG-ARLTA 350
Query: 602 WTYDGIEITLREPLV 616
+ G + +R ++
Sbjct: 351 YAPKGAGVYVRPSMI 365
>gi|423400818|ref|ZP_17377991.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-2]
gi|423478477|ref|ZP_17455192.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6X1-1]
gi|401653808|gb|EJS71351.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-2]
gi|402428639|gb|EJV60736.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6X1-1]
Length = 368
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 186/376 (49%), Gaps = 43/376 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGKSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ G + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + ++ K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKESLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 244 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 301
Query: 543 VGIRLQPPIGQ--DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
G L PP + + EL + + ++ T D+ +GLGW ++ G A +
Sbjct: 302 AGDLLSPPTPEELENMPELVKY-EFNIREPKT-------DVVFSGLGWVTVNEPG-AKIV 352
Query: 601 LWTYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 353 AHVPKGVSVSLRKSLI 368
>gi|15613886|ref|NP_242189.1| GTP-binding protein YqeH [Bacillus halodurans C-125]
gi|10173939|dbj|BAB05042.1| BH1323 [Bacillus halodurans C-125]
Length = 367
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 192/376 (51%), Gaps = 41/376 (10%)
Query: 242 KGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCV 301
K +V +C RC +++Y NEV + + D DF +++ T G A ++V +VD
Sbjct: 32 KRDVIICQRCFRMQHY----NEVQDVSLTDDDFLKILHT-----IGERKA-LIVKLVDIF 81
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DF+G + + + +D ++L+G KVDLLP V+ R+ W+R
Sbjct: 82 DFNGSWLPGLHRFV------GGND---------VLLIGNKVDLLPKSVNRNRMINWMRKS 126
Query: 362 AKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK 421
AK G ++ V L+S K +GV+ + + I L + +V+V+GA N GKST IN +
Sbjct: 127 AKDLGLKPID-VALISGEKGIGVKEVASLIDRLRKGK-DVYVVGATNVGKSTFINKMIQI 184
Query: 422 EGVKVSKL-TEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
G ++ T + PGTTL ++ I L LYDTPG+++ H M+ + ++E K++
Sbjct: 185 FGGDEEQMITTSHFPGTTLDMIDIP--LDDGKTLYDTPGIINHHQMAHYVAKNELKLITP 242
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+ +++ Q + GGL R D + E + S ++ +H K+E ADE+++
Sbjct: 243 KKEIKPKVFQLNEEQTLFFGGLARFDFVKG--ERTSFVCYVSNDLFIHRTKLEKADELYE 300
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
+G L PP + L + + + V +D+ +GLGW ++ +
Sbjct: 301 KRLGDVLTPP---EDPQHLPSLVKHEFTIR-----VQKVDVVISGLGWVTVN-GTNVKVC 351
Query: 601 LWTYDGIEITLREPLV 616
+ +G+ +++RE L+
Sbjct: 352 AYAPEGVGVSIRESLI 367
>gi|195978787|ref|YP_002124031.1| GTP-binding protein YqeH [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975492|gb|ACG63018.1| GTPase [Streptococcus equi subsp. zooepidemicus MGCS10565]
Length = 372
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 183/376 (48%), Gaps = 50/376 (13%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y N++ + I D +F +L+ G+++A +VV VVD DF+G
Sbjct: 40 CQRCFRLRHY----NDITDVHITDDEF-----LKLLHEVGDSDA-LVVNVVDIFDFNGSV 89
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
++ + A +D ++LVG K D+LP V +++ +W+ RA G
Sbjct: 90 IPGLSRFV------AGND---------ILLVGNKKDILPKSVKDSKVTQWLTERAHEEGL 134
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ V L SA+ ++ L+ I +L R +V+V+G N GKSTLIN ++
Sbjct: 135 RPLD-VLLTSAQNKYAIKELIERIDQLR-QRRDVYVVGVTNVGKSTLINAIIQEITGDKD 192
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL + I L + ++DTPG++H H M+ L+ K + +KE++P+
Sbjct: 193 VITTSRFPGTTLDKIEIP--LDDGSFIFDTPGIIHRHQMAHYLSAKNLKFISPKKEIKPK 250
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ Q + +GGL R D S E T + + LH K+E AD + G+ L
Sbjct: 251 TYQLNPKQTLFLGGLARFDF--ISGERQGFTAYFDNQLLLHRTKLEGADAFYDKQAGLLL 308
Query: 548 QPPIGQD-----RASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEAS--LT 600
PP Q+ R D+K+ DI +GLGW + E + +
Sbjct: 309 TPPDKQELDDFPRLVRHEFLLDQKM------------DIVFSGLGWICVNANKETATKVA 356
Query: 601 LWTYDGIEITLREPLV 616
W DG+ + +R+ ++
Sbjct: 357 AWAPDGVAVVVRKAII 372
>gi|239827797|ref|YP_002950421.1| GTP-binding protein YqeH [Geobacillus sp. WCH70]
gi|239808090|gb|ACS25155.1| Nitric-oxide synthase [Geobacillus sp. WCH70]
Length = 370
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 192/382 (50%), Gaps = 47/382 (12%)
Query: 239 QKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVV 298
+KEK EV +C RC L++Y NEV + + D DF +++ G + A +VV +V
Sbjct: 32 EKEKEEV-ICQRCFRLKHY----NEVQDVALTDDDF-----LKILHRIGQSEA-LVVKIV 80
Query: 299 DCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWV 358
D DF+G + + + ++LVG KVDLLP V +L W+
Sbjct: 81 DIFDFNGSWLPGLHRFVANN---------------PIMLVGNKVDLLPKSVKYPKLIHWM 125
Query: 359 RHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF 418
+ A G ++ + LVSA K +G+ ++ I++ + +V+V+G N GKST IN
Sbjct: 126 KQSASDLGLKPID-ICLVSAVKGIGMAKVMEAIEKYRFGK-DVYVVGCTNVGKSTFINRI 183
Query: 419 AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMV 478
++ K + +T + PGTTL ++ I L A +YDTPG+++ H M+ +++ + K++
Sbjct: 184 IQEATGKGNVITTSYFPGTTLDMIEIP--LDDGAAIYDTPGIINHHQMAHFVDKKDLKII 241
Query: 479 EIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEI 538
++E+ P+ Y++ Q + GGL RLD + + + S + +H K+E AD +
Sbjct: 242 TPKREIHPKVYQLNEQQTLFFGGLARLDYIKGGRRSF--VCYFSNELLIHRTKLEKADAL 299
Query: 539 WKNHVGIRLQPP----IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
+ N +G L PP I Q E T+ ++ K DI +GLGW +
Sbjct: 300 YANQLGELLSPPRKHYIDQFPPLEAHTFTIKERKT----------DIVFSGLGWVTCNEP 349
Query: 595 GEASLTLWTYDGIEITLREPLV 616
G A + + G++I +R+ L+
Sbjct: 350 G-AQVVAYAPKGVDILIRKSLI 370
>gi|307706091|ref|ZP_07642910.1| conserved hypothetical protein [Streptococcus mitis SK321]
gi|307618491|gb|EFN97639.1| conserved hypothetical protein [Streptococcus mitis SK321]
Length = 368
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 185/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V P ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKPGKISQWLMERAYEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + H+G L PP +++ +D V D+ +GL
Sbjct: 288 LHRTKLEGASAFYDKHLGTLLTPPNSKEK-------EDFPKLVQHVFNIKEKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + R+ ++
Sbjct: 341 GW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|81429003|ref|YP_396003.1| GTP-binding protein YqeH [Lactobacillus sakei subsp. sakei 23K]
gi|78610645|emb|CAI55696.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K]
Length = 378
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 188/377 (49%), Gaps = 41/377 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E G++ C RC LR+Y NE+++ + D DF L+ G+++A ++V VVD
Sbjct: 42 ETGQL-YCQRCFRLRHY----NEISDIKLNDDDF-----LALLNQIGDSDA-LIVNVVDI 90
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G SL L D + +LVG KVD+LP+ ++P R+ W++
Sbjct: 91 FDFNG--------SLIPGLHRFIGDNPV-------ILVGNKVDILPTALNPNRVINWIQK 135
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
AK G + + LVSA+K V +LLA I+ R +V+V+G N GKSTLIN K
Sbjct: 136 EAKEHGLHPIETM-LVSAKKGNSVDDLLAVIERERKGR-DVYVVGVTNVGKSTLINRIIK 193
Query: 421 KEGVKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
+ G+ S +T + PGTTL + I + L DTPG++H M+ L+ + +++
Sbjct: 194 QTGILDSDVITTSQFPGTTLDRIDIP-LYEDDHALIDTPGIIHAQQMAHYLHDKDLRLIA 252
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+K+++P+ Y++ Q + +GGL R D Q + + +H K+ENAD +
Sbjct: 253 PQKQIKPKVYQLNEQQTLFLGGLARFDYLQGPRHGF--VGYFDNELYIHRTKLENADNFY 310
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+G LQPP +D A + + + S D+ AGLGW + L +
Sbjct: 311 VRQLGDLLQPPHPEDLA-DFPDLQRYEFSTKEKS------DLVFAGLGWIT--LPENVVV 361
Query: 600 TLWTYDGIEITLREPLV 616
+ G+ + +R+ L+
Sbjct: 362 AGYAPKGVSVMIRKALI 378
>gi|419443162|ref|ZP_13983188.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13224]
gi|379550627|gb|EHZ15724.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13224]
Length = 368
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 186/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|366089348|ref|ZP_09455821.1| GTPase YqeH [Lactobacillus acidipiscis KCTC 13900]
Length = 374
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 168/344 (48%), Gaps = 36/344 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NEV++ + D DF L+ G+A+A ++V V+D DF+G
Sbjct: 44 CQRCFRLRHY----NEVSDVSLTDDDF-----LALLNQIGSADA-LIVNVIDVFDFNG-- 91
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
SL + + + ++V K DLLP + ++L WVR RA A G
Sbjct: 92 ------SLIPGIHRFVGNNPV-------LMVANKEDLLPRSLKRSKLKDWVRQRANAEGI 138
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
++ V + SA K + LL I++ R +V+V+G N GKSTLIN K+
Sbjct: 139 HPVD-VIMTSATKQHALEELLKAIEKYREGR-DVYVVGVTNVGKSTLINQIIKRSTGMQD 196
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL + I L + DTPG++H M+ L+ E ++ +KE++P+
Sbjct: 197 LITTSSFPGTTLDKIEIP--LDDGRMIVDTPGIIHKDQMAHYLSAKELRLATPQKEIRPK 254
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
Y++ GGQ + GGL R DL V V+ N+ +H K+E AD + H G L
Sbjct: 255 VYQLAGGQTLFFGGLARFDLITGPSTRNGVVVYMENNLQVHRTKLEKADAFFVRHQGELL 314
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
QPP + S+ + + KV S DI GLGW ++
Sbjct: 315 QPPTTGE-LSDFPPMERFEFKVREKS------DIVFEGLGWVTV 351
>gi|171780310|ref|ZP_02921214.1| hypothetical protein STRINF_02098 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|379705906|ref|YP_005204365.1| GTP-binding protein [Streptococcus infantarius subsp. infantarius
CJ18]
gi|171281658|gb|EDT47093.1| ribosome biogenesis GTPase YqeH [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|374682605|gb|AEZ62894.1| GTP-binding protein [Streptococcus infantarius subsp. infantarius
CJ18]
Length = 372
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 188/387 (48%), Gaps = 43/387 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GE+ C RC LR+Y NE+ + I D +F +L+ G+++A
Sbjct: 26 KAALEKGLETGEL-YCQRCFRLRHY----NEITDVHITDDEF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV VVD DF+G + P + D ++LVG K D+LP V
Sbjct: 75 LVVNVVDIFDFNGSVIPG------LSRFVSGND----------VLLVGNKKDILPKSVKT 118
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
++ +W+ RA G ++ V L SA+ +++L+ I++L R +V+V+G N GK
Sbjct: 119 GKVTQWLTERAHEEGLRPVD-VILTSAQNHQAIKDLIEKIEKLRKGR-DVYVVGVTNVGK 176
Query: 412 STLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
STLIN K+ + +T + PGTTL + I L + ++DTPG++H H M+ L
Sbjct: 177 STLINAIIKEITGEKDIITTSRFPGTTLDKIEIP--LDDGSYIFDTPGIIHRHQMAHYLG 234
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
K + +KE++P+TY++ Q + + GL R D + T + N+ LH K
Sbjct: 235 DKNLKYISPKKEIKPKTYQLNPEQTLFLAGLGRFDFISGDKQGF--TAYFDNNLKLHRTK 292
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ AD + HVG L PP ++ A E + + + +D+ +GLGW +
Sbjct: 293 LAGADAFYDKHVGSLLIPPSDKELA-EFPKLVCHEFTIK------DKMDVVYSGLGWIRI 345
Query: 592 GLKGE--ASLTLWTYDGIEITLREPLV 616
+ + W +G+ + LR+ L+
Sbjct: 346 KASQDKPVKIAAWAPEGVAVLLRKALI 372
>gi|423634841|ref|ZP_17610494.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD156]
gi|401278827|gb|EJR84757.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD156]
Length = 368
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 185/376 (49%), Gaps = 43/376 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGKSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ G + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELAEAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + + K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKQSLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 244 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 301
Query: 543 VGIRLQPPIGQ--DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
G L PP + + EL + + ++ T D+ +GLGW ++ G A +
Sbjct: 302 AGDLLSPPTPEELENMPELVKY-EFNIREPKT-------DVVFSGLGWVTVNEPG-AKIV 352
Query: 601 LWTYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 353 AHVPKGVSVSLRKSLI 368
>gi|374338656|ref|YP_005095373.1| GTP-binding protein YqeH [Streptococcus macedonicus ACA-DC 198]
gi|372284773|emb|CCF03066.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Streptococcus macedonicus ACA-DC 198]
Length = 372
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 192/387 (49%), Gaps = 43/387 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E G++ C RC LR+Y NE+ + I D +F +L+ G+++A
Sbjct: 26 KAALEKGLESGKL-YCQRCFRLRHY----NEITDVHITDDEF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV VVD DF+G S+ L D + +LVG K D+LP V +
Sbjct: 75 LVVNVVDIFDFNG--------SVIPGLPRFVSDNDV-------LLVGNKKDILPKSVKDS 119
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ +W+ RA G ++ V L SA+ +++L+ I++L R +V+V+G N GKS
Sbjct: 120 KVTQWLTERAHEEGIRPVD-VVLTSAQNHQAIKDLIEKIEKLRRGR-DVYVVGVTNVGKS 177
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K+ + +T + PGTTL + I L + ++DTPG++H H M+ L
Sbjct: 178 TLINAIIKEITGEKDIITTSRFPGTTLDKIEIP--LDDGSYIFDTPGIIHRHQMAHYLGD 235
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
K + +KE++P+TY++ Q + + GL R D + T + N+ LH K+
Sbjct: 236 KNLKYISPKKEIKPKTYQLNPEQTLFLAGLGRFDFISGDKQGF--TAYFDNNLKLHRTKL 293
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNG-IDIAAAGLGWFSL 591
AD + HVG L PP + EL + K+ + + +D+ +GLGW +
Sbjct: 294 AGADAFYDKHVGSLLTPPTDK----ELVDFP----KLVRHEFTIKAKMDVVYSGLGWIRI 345
Query: 592 GLKGEASLTL--WTYDGIEITLREPLV 616
++ + + W +G+ + LR+ L+
Sbjct: 346 KASQDSPVKIAAWAPEGVAVLLRKALI 372
>gi|425737432|ref|ZP_18855705.1| GTPase YqeH [Staphylococcus massiliensis S46]
gi|425482780|gb|EKU49936.1| GTPase YqeH [Staphylococcus massiliensis S46]
Length = 366
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 188/380 (49%), Gaps = 53/380 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NEV + + DF ++ + G+VV V+D DF
Sbjct: 33 EDVICKRCFRLKHY----NEVQDVGMDSEDFLDLLT------GLSDKKGIVVNVIDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K ++L K+DLLP Q++ R+ W++ A+
Sbjct: 83 EGSFIHAIKRIVGNK---------------PIILAANKIDLLPKQINKRRVTEWIKRTAR 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
+ G + V L+SA K++G+ LL I++ G + +V+++G N GKSTLIN +
Sbjct: 128 SYGL-ETEVVVLLSAEKNIGLETLLETIEKYRG-QDDVYIVGTTNVGKSTLINKLIETSV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L + ++DTPG++ H M+ ++ E K++ +KE
Sbjct: 186 GEKDVVTTSRFPGTTLDMIDIP--LNDDSFMFDTPGIIQEHQMTHLVSDKELKIIMPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R +++ GQ ++ GGL R+D + + + S + +H K ENAD +W+ +
Sbjct: 244 IKQRVFQLNEGQTLYFGGLARIDYHEGGKRPL--VCYFSNELHIHRTKTENADRLWETKL 301
Query: 544 GIRLQPP-------IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
G L+PP + Q + +L T K +K D+ +GLG+ + ++
Sbjct: 302 GDVLEPPKDPSQFNLDQIKTVKLETGKHKK-------------DVMISGLGFIT--IESG 346
Query: 597 ASLTLWTYDGIEITLREPLV 616
A + +++TLR ++
Sbjct: 347 AKFVVKVPRNVDVTLRPSIM 366
>gi|421268909|ref|ZP_15719778.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR95]
gi|421307943|ref|ZP_15758585.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60132]
gi|395869163|gb|EJG80279.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR95]
gi|395907328|gb|EJH18222.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60132]
Length = 368
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 186/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G++NA
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSNA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|357238329|ref|ZP_09125666.1| ribosome biogenesis GTPase YqeH [Streptococcus ictaluri 707-05]
gi|356753052|gb|EHI70173.1| ribosome biogenesis GTPase YqeH [Streptococcus ictaluri 707-05]
Length = 372
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 195/398 (48%), Gaps = 44/398 (11%)
Query: 224 KKLSKAE---RKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIAT 280
+ LSK+E A E E GE+ C RC LR+Y N++ + I D +F
Sbjct: 14 QTLSKSEVGYTPLSALEKGLETGEL-YCQRCFRLRHY----NDITDVNITDDEF-----L 63
Query: 281 RLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGT 340
L+ G+++A +V+ V+D DF+G + + D ++LVG
Sbjct: 64 TLLHEVGDSDA-LVLNVIDIFDFNG-----SVIPGLSRFVSGND----------VLLVGN 107
Query: 341 KVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN 400
K D+LP V +L +W+ RA G ++ V L SA+ +++L+ I +L R +
Sbjct: 108 KKDILPKSVKDGKLTQWLTERAHEEGFRPVD-VLLTSAQNKYAIKDLMKRIDQLRKGR-D 165
Query: 401 VWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGL 460
V+V+G N GKSTLIN ++ +T + PGTTL + I L + ++DTPG+
Sbjct: 166 VYVVGVTNVGKSTLINAIIQEITGNKDLITTSRFPGTTLDKIEIP--LDDGSFIFDTPGI 223
Query: 461 LHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVW 520
+H H M+ L+ + K V +KE++P+TY++ Q++ +GGL R D + T +
Sbjct: 224 IHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNPEQSLFLGGLGRFDFINGDRQGF--TAF 281
Query: 521 ASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGID 580
N+ LH K+E A ++ H+G L PP G+ ++ + + + +D
Sbjct: 282 FDNNLLLHRTKLEGASTFYEKHLGTLLTPP-GKKEVADFPKLVRHEFTID------DKMD 334
Query: 581 IAAAGLGWFSLGLKGEAS--LTLWTYDGIEITLREPLV 616
I +GLGW + E+ + W +G+ + +R+ L+
Sbjct: 335 IVFSGLGWIRIQANKESKTRVAAWAPEGVAVLVRKALI 372
>gi|15903636|ref|NP_359186.1| GTP-binding protein YqeH [Streptococcus pneumoniae R6]
gi|116516270|ref|YP_817012.1| GTP-binding protein YqeH [Streptococcus pneumoniae D39]
gi|418200723|ref|ZP_12837166.1| hypothetical protein SPAR109_1706 [Streptococcus pneumoniae
GA47976]
gi|421211617|ref|ZP_15668599.1| hypothetical protein AMCSP03_001638 [Streptococcus pneumoniae
2070035]
gi|421232451|ref|ZP_15689092.1| hypothetical protein AMCSP16_001610 [Streptococcus pneumoniae
2080076]
gi|421266746|ref|ZP_15717626.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR27]
gi|15459261|gb|AAL00397.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116076846|gb|ABJ54566.1| GTP-binding protein [Streptococcus pneumoniae D39]
gi|353864264|gb|EHE44182.1| hypothetical protein SPAR109_1706 [Streptococcus pneumoniae
GA47976]
gi|395572725|gb|EJG33320.1| hypothetical protein AMCSP03_001638 [Streptococcus pneumoniae
2070035]
gi|395594954|gb|EJG55189.1| hypothetical protein AMCSP16_001610 [Streptococcus pneumoniae
2080076]
gi|395866814|gb|EJG77942.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR27]
Length = 368
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 186/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKYAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|229117833|ref|ZP_04247197.1| hypothetical protein bcere0017_41040 [Bacillus cereus Rock1-3]
gi|423377807|ref|ZP_17355091.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1O-2]
gi|423547638|ref|ZP_17523996.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB5-5]
gi|423622577|ref|ZP_17598355.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD148]
gi|228665630|gb|EEL21108.1| hypothetical protein bcere0017_41040 [Bacillus cereus Rock1-3]
gi|401179359|gb|EJQ86532.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB5-5]
gi|401260697|gb|EJR66865.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD148]
gi|401636073|gb|EJS53827.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1O-2]
Length = 368
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 186/376 (49%), Gaps = 43/376 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGRSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG KVDL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKVDLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRDGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + ++ K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKESLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 244 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 301
Query: 543 VGIRLQPPIGQ--DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
G L PP + + EL + + ++ T D+ +GLGW ++ G A +
Sbjct: 302 AGDLLSPPTPEELENMPELVKY-EFNIREPKT-------DVVFSGLGWVTVNESG-AKIV 352
Query: 601 LWTYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 353 AHVPKGVSVSLRKSLI 368
>gi|260663501|ref|ZP_05864391.1| ribosome biogenesis GTPase YqeH [Lactobacillus fermentum 28-3-CHN]
gi|260552042|gb|EEX25095.1| ribosome biogenesis GTPase YqeH [Lactobacillus fermentum 28-3-CHN]
Length = 374
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 187/378 (49%), Gaps = 45/378 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+A + D DF RL+ ANA ++V VVD
Sbjct: 40 ETGEL-YCQRCFRLRHY----NEIAPVSLTDDDF-----LRLLSHIREANA-LIVYVVDI 88
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G S+ L + K P L LVG K DLLP + ++L W+R
Sbjct: 89 FDFNG--------SIIPGLH------RFVGKNPVL-LVGNKEDLLPRSLRRSKLTDWLRQ 133
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
+A G L LVSA+K+ V LLA I++ R +V+V+G N GKSTLIN K
Sbjct: 134 QANQAGIRPLMTT-LVSAKKNHQVEELLATIEKYRQGR-DVYVVGVTNVGKSTLINQIIK 191
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL + I L +L DTPG++H M+ L ++ ++V
Sbjct: 192 QRTGVEDLITTSRFPGTTLDKIEIP--LEDGHELVDTPGIIHQEQMAHVLPAEDLRLVAP 249
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GG+ R D + + T + N+ LH K+ NAD ++
Sbjct: 250 QKEIKPKTYQLDEQQTIFLGGIARFDYLKGPRAGL--TAYFDNNLPLHRTKLANADAFYE 307
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H+G L PP Q+ + + + ++ S D+ GLGW ++ A L
Sbjct: 308 KHLGGLLVPP-HQNEIDQFPPLERFEFAITEKS------DLVFEGLGWITV----PAGLV 356
Query: 601 L--WTYDGIEITLREPLV 616
+ W G+ + +R ++
Sbjct: 357 VAGWAPKGVGVLVRRAMI 374
>gi|456370287|gb|EMF49183.1| GTP-binding protein [Streptococcus parauberis KRS-02109]
Length = 372
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 186/378 (49%), Gaps = 41/378 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+ + I D +F +L+ G+++A +V+ V+D
Sbjct: 34 ETGEL-YCQRCFRLRHY----NEITDVNISDEEF-----LKLLHEVGDSDA-LVINVIDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G + + D ++LVG K D+LP V ++ +W+
Sbjct: 83 FDFNG-----SVIPGLSRFVSGND----------VLLVGNKKDILPKSVKEGKVTQWLTE 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G L+ V L SA+ + ++ L+ I +L R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGLRPLD-VILTSAQNNNAIKELIEKINQLRKGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL + I L ++DTPG++H H M+ L + K +
Sbjct: 186 EITGDKDIITTSRFPGTTLDKIEIP--LDDGTFIFDTPGIIHRHQMAHFLTAKDLKYISP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GGL R D + T + N+++H K+E A E ++
Sbjct: 244 KKEIKPKTYQLNSEQTLFLGGLGRFDFISGDKQGF--TAYFDNNLTVHRTKLEGASEFYQ 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H+G+ L PP D+ + + +S + D+ +GLGW + +A +
Sbjct: 302 KHLGLLLTPPGPADK-EDFPKLVPHEFTISDKT------DLVFSGLGWLRINGSKDAPVR 354
Query: 601 L--WTYDGIEITLREPLV 616
+ W G+ + R+ ++
Sbjct: 355 IAGWAPKGVSVLTRKAII 372
>gi|30264407|ref|NP_846784.1| GTP-binding protein YqeH [Bacillus anthracis str. Ames]
gi|42783462|ref|NP_980709.1| GTP-binding protein YqeH [Bacillus cereus ATCC 10987]
gi|47569331|ref|ZP_00240015.1| GTPase of unknown function [Bacillus cereus G9241]
gi|47778309|ref|YP_021207.2| GTP-binding protein YqeH [Bacillus anthracis str. 'Ames Ancestor']
gi|49187229|ref|YP_030481.1| GTP-binding protein YqeH [Bacillus anthracis str. Sterne]
gi|49481394|ref|YP_038389.1| GTP-binding protein YqeH [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52141172|ref|YP_085660.1| GTP-binding protein YqeH [Bacillus cereus E33L]
gi|65321707|ref|ZP_00394666.1| COG1161: Predicted GTPases [Bacillus anthracis str. A2012]
gi|118479501|ref|YP_896652.1| GTP-binding protein YqeH [Bacillus thuringiensis str. Al Hakam]
gi|165873260|ref|ZP_02217870.1| GTPase family protein [Bacillus anthracis str. A0488]
gi|167634670|ref|ZP_02392990.1| GTPase family protein [Bacillus anthracis str. A0442]
gi|167638624|ref|ZP_02396900.1| GTPase family protein [Bacillus anthracis str. A0193]
gi|170687451|ref|ZP_02878668.1| GTPase family protein [Bacillus anthracis str. A0465]
gi|170707440|ref|ZP_02897894.1| GTPase family protein [Bacillus anthracis str. A0389]
gi|177653312|ref|ZP_02935564.1| GTPase family protein [Bacillus anthracis str. A0174]
gi|190567041|ref|ZP_03019957.1| GTPase family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|196034517|ref|ZP_03101926.1| GTPase family protein [Bacillus cereus W]
gi|196039178|ref|ZP_03106484.1| GTPase family protein [Bacillus cereus NVH0597-99]
gi|196044801|ref|ZP_03112035.1| GTPase family protein [Bacillus cereus 03BB108]
gi|206976038|ref|ZP_03236948.1| GTPase family protein [Bacillus cereus H3081.97]
gi|217961825|ref|YP_002340395.1| GTP-binding protein YqeH [Bacillus cereus AH187]
gi|218905472|ref|YP_002453306.1| GTP-binding protein YqeH [Bacillus cereus AH820]
gi|225866316|ref|YP_002751694.1| GTPase family protein [Bacillus cereus 03BB102]
gi|227817112|ref|YP_002817121.1| GTP-binding protein YqeH [Bacillus anthracis str. CDC 684]
gi|228916967|ref|ZP_04080528.1| hypothetical protein bthur0012_41800 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228929380|ref|ZP_04092403.1| hypothetical protein bthur0010_40660 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228935656|ref|ZP_04098470.1| hypothetical protein bthur0009_41020 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228948049|ref|ZP_04110334.1| hypothetical protein bthur0007_41760 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228987588|ref|ZP_04147704.1| hypothetical protein bthur0001_42580 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229093405|ref|ZP_04224510.1| hypothetical protein bcere0021_41310 [Bacillus cereus Rock3-42]
gi|229123874|ref|ZP_04253067.1| hypothetical protein bcere0016_41600 [Bacillus cereus 95/8201]
gi|229141073|ref|ZP_04269615.1| hypothetical protein bcere0013_41670 [Bacillus cereus BDRD-ST26]
gi|229157950|ref|ZP_04286022.1| hypothetical protein bcere0010_41300 [Bacillus cereus ATCC 4342]
gi|229186575|ref|ZP_04313736.1| hypothetical protein bcere0004_41180 [Bacillus cereus BGSC 6E1]
gi|229198463|ref|ZP_04325167.1| hypothetical protein bcere0001_39910 [Bacillus cereus m1293]
gi|229601475|ref|YP_002868625.1| GTP-binding protein YqeH [Bacillus anthracis str. A0248]
gi|254684092|ref|ZP_05147952.1| GTP-binding protein YqeH [Bacillus anthracis str. CNEVA-9066]
gi|254721926|ref|ZP_05183715.1| GTP-binding protein YqeH [Bacillus anthracis str. A1055]
gi|254741477|ref|ZP_05199164.1| GTP-binding protein YqeH [Bacillus anthracis str. Kruger B]
gi|254750916|ref|ZP_05202955.1| GTP-binding protein YqeH [Bacillus anthracis str. Vollum]
gi|254757756|ref|ZP_05209783.1| GTP-binding protein YqeH [Bacillus anthracis str. Australia 94]
gi|300118672|ref|ZP_07056400.1| GTP-binding protein YqeH [Bacillus cereus SJ1]
gi|301055827|ref|YP_003794038.1| GTPase [Bacillus cereus biovar anthracis str. CI]
gi|375286342|ref|YP_005106781.1| GTPase family protein [Bacillus cereus NC7401]
gi|376268233|ref|YP_005120945.1| GTP-binding protein YqeH like protein [Bacillus cereus F837/76]
gi|384182155|ref|YP_005567917.1| GTPase YqeH [Bacillus thuringiensis serovar finitimus YBT-020]
gi|386738225|ref|YP_006211406.1| GTP-binding protein [Bacillus anthracis str. H9401]
gi|402555530|ref|YP_006596801.1| GTPase YqeH [Bacillus cereus FRI-35]
gi|421506589|ref|ZP_15953512.1| GTPase YqeH [Bacillus anthracis str. UR-1]
gi|421638410|ref|ZP_16079006.1| GTPase YqeH [Bacillus anthracis str. BF1]
gi|423354828|ref|ZP_17332453.1| ribosome biogenesis GTPase YqeH [Bacillus cereus IS075]
gi|423373786|ref|ZP_17351125.1| ribosome biogenesis GTPase YqeH [Bacillus cereus AND1407]
gi|423549923|ref|ZP_17526250.1| ribosome biogenesis GTPase YqeH [Bacillus cereus ISP3191]
gi|423570575|ref|ZP_17546820.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-A12]
gi|423573985|ref|ZP_17550104.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-D12]
gi|423604015|ref|ZP_17579908.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD102]
gi|30259065|gb|AAP28270.1| ribosome biogenesis protein GTPase YqeH [Bacillus anthracis str.
Ames]
gi|42739391|gb|AAS43317.1| GTPase family protein [Bacillus cereus ATCC 10987]
gi|47552014|gb|AAT33682.2| GTPase family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|47554002|gb|EAL12369.1| GTPase of unknown function [Bacillus cereus G9241]
gi|49181156|gb|AAT56532.1| GTPase family protein [Bacillus anthracis str. Sterne]
gi|49332950|gb|AAT63596.1| GTP-binding protein [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|51974641|gb|AAU16191.1| GTP-binding protein [Bacillus cereus E33L]
gi|118418726|gb|ABK87145.1| GTP-binding protein [Bacillus thuringiensis str. Al Hakam]
gi|164711019|gb|EDR16586.1| GTPase family protein [Bacillus anthracis str. A0488]
gi|167513472|gb|EDR88842.1| GTPase family protein [Bacillus anthracis str. A0193]
gi|167530122|gb|EDR92857.1| GTPase family protein [Bacillus anthracis str. A0442]
gi|170127684|gb|EDS96557.1| GTPase family protein [Bacillus anthracis str. A0389]
gi|170668646|gb|EDT19392.1| GTPase family protein [Bacillus anthracis str. A0465]
gi|172081594|gb|EDT66666.1| GTPase family protein [Bacillus anthracis str. A0174]
gi|190562032|gb|EDV16001.1| GTPase family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|195993059|gb|EDX57018.1| GTPase family protein [Bacillus cereus W]
gi|196024289|gb|EDX62962.1| GTPase family protein [Bacillus cereus 03BB108]
gi|196029805|gb|EDX68406.1| GTPase family protein [Bacillus cereus NVH0597-99]
gi|206745790|gb|EDZ57187.1| GTPase family protein [Bacillus cereus H3081.97]
gi|217066660|gb|ACJ80910.1| GTPase family protein [Bacillus cereus AH187]
gi|218536686|gb|ACK89084.1| GTPase family protein [Bacillus cereus AH820]
gi|225786457|gb|ACO26674.1| GTPase family protein [Bacillus cereus 03BB102]
gi|227004029|gb|ACP13772.1| GTPase family protein [Bacillus anthracis str. CDC 684]
gi|228584966|gb|EEK43080.1| hypothetical protein bcere0001_39910 [Bacillus cereus m1293]
gi|228596834|gb|EEK54493.1| hypothetical protein bcere0004_41180 [Bacillus cereus BGSC 6E1]
gi|228625510|gb|EEK82265.1| hypothetical protein bcere0010_41300 [Bacillus cereus ATCC 4342]
gi|228642351|gb|EEK98640.1| hypothetical protein bcere0013_41670 [Bacillus cereus BDRD-ST26]
gi|228659588|gb|EEL15235.1| hypothetical protein bcere0016_41600 [Bacillus cereus 95/8201]
gi|228689999|gb|EEL43802.1| hypothetical protein bcere0021_41310 [Bacillus cereus Rock3-42]
gi|228772129|gb|EEM20579.1| hypothetical protein bthur0001_42580 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228811635|gb|EEM57971.1| hypothetical protein bthur0007_41760 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228824016|gb|EEM69834.1| hypothetical protein bthur0009_41020 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228830286|gb|EEM75900.1| hypothetical protein bthur0010_40660 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228842688|gb|EEM87775.1| hypothetical protein bthur0012_41800 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|229265883|gb|ACQ47520.1| GTPase family protein [Bacillus anthracis str. A0248]
gi|298723921|gb|EFI64635.1| GTP-binding protein YqeH [Bacillus cereus SJ1]
gi|300377996|gb|ADK06900.1| GTPase family protein [Bacillus cereus biovar anthracis str. CI]
gi|324328239|gb|ADY23499.1| GTPase YqeH [Bacillus thuringiensis serovar finitimus YBT-020]
gi|358354869|dbj|BAL20041.1| GTPase family protein [Bacillus cereus NC7401]
gi|364514033|gb|AEW57432.1| GTP-binding protein YqeH like protein [Bacillus cereus F837/76]
gi|384388077|gb|AFH85738.1| GTP-binding protein [Bacillus anthracis str. H9401]
gi|401085832|gb|EJP94066.1| ribosome biogenesis GTPase YqeH [Bacillus cereus IS075]
gi|401095187|gb|EJQ03247.1| ribosome biogenesis GTPase YqeH [Bacillus cereus AND1407]
gi|401189539|gb|EJQ96589.1| ribosome biogenesis GTPase YqeH [Bacillus cereus ISP3191]
gi|401203771|gb|EJR10606.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-A12]
gi|401212554|gb|EJR19297.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MSX-D12]
gi|401245701|gb|EJR52054.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD102]
gi|401796740|gb|AFQ10599.1| GTPase YqeH [Bacillus cereus FRI-35]
gi|401823582|gb|EJT22729.1| GTPase YqeH [Bacillus anthracis str. UR-1]
gi|403394836|gb|EJY92076.1| GTPase YqeH [Bacillus anthracis str. BF1]
Length = 368
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 185/376 (49%), Gaps = 43/376 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGKSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ G + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + + K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKQSLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 244 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 301
Query: 543 VGIRLQPPIGQ--DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
G L PP + + EL + + ++ T D+ +GLGW ++ G A +
Sbjct: 302 AGDLLSPPTPEELENMPELVKY-EFNIREPKT-------DVVFSGLGWVTVNEPG-AKIV 352
Query: 601 LWTYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 353 AHVPKGVSVSLRKSLI 368
>gi|184155783|ref|YP_001844123.1| GTP-binding protein YqeH [Lactobacillus fermentum IFO 3956]
gi|227515625|ref|ZP_03945674.1| GTP-binding protein [Lactobacillus fermentum ATCC 14931]
gi|385812532|ref|YP_005848923.1| GTP-binding protein [Lactobacillus fermentum CECT 5716]
gi|183227127|dbj|BAG27643.1| GTPase [Lactobacillus fermentum IFO 3956]
gi|227086055|gb|EEI21367.1| GTP-binding protein [Lactobacillus fermentum ATCC 14931]
gi|299783429|gb|ADJ41427.1| GTP-binding protein [Lactobacillus fermentum CECT 5716]
Length = 374
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/378 (32%), Positives = 187/378 (49%), Gaps = 45/378 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+A + D DF RL+ ANA ++V VVD
Sbjct: 40 ETGEL-YCQRCFRLRHY----NEIAPVSLTDDDF-----LRLLSHIREANA-LIVYVVDI 88
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G S+ L + K P L LVG K DLLP + ++L W+R
Sbjct: 89 FDFNG--------SIIPGLH------RFVGKNPVL-LVGNKEDLLPRSLRRSKLTDWLRQ 133
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
+A G L LVSA+K+ V LLA I++ R +V+V+G N GKSTLIN K
Sbjct: 134 QANQAGIRPLMTT-LVSAKKNHQVEELLATIEKYRQGR-DVYVVGVTNVGKSTLINQIIK 191
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL + I L +L DTPG++H M+ L ++ ++V
Sbjct: 192 QRTGVEDLITTSRFPGTTLDKIEIP--LDDGHELVDTPGIIHQEQMAHVLPAEDLRLVAP 249
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GG+ R D + + T + N+ LH K+ NAD ++
Sbjct: 250 QKEIKPKTYQLDEQQTIFLGGIARFDYLKGPRAGL--TAYFDNNLPLHRTKLANADAFYE 307
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H+G L PP Q+ + + + ++ S D+ GLGW ++ A L
Sbjct: 308 KHLGGLLVPP-HQNEIDQFPPLERFEFAITEKS------DLVFEGLGWITV----PAGLV 356
Query: 601 L--WTYDGIEITLREPLV 616
+ W G+ + +R ++
Sbjct: 357 VAGWAPKGVGVLVRRAMI 374
>gi|228923088|ref|ZP_04086380.1| hypothetical protein bthur0011_40680 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|423582543|ref|ZP_17558654.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD014]
gi|228836586|gb|EEM81935.1| hypothetical protein bthur0011_40680 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|401213422|gb|EJR20163.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD014]
Length = 368
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 185/376 (49%), Gaps = 43/376 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGKSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ G + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + + K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKQSLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 244 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 301
Query: 543 VGIRLQPPIGQ--DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
G L PP + + EL + + ++ T D+ +GLGW ++ G A +
Sbjct: 302 AGDLLSPPTPEELENMPELVKY-EFNIREPKT-------DVVFSGLGWVTVNEPG-AKIV 352
Query: 601 LWTYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 353 AHVPKGVSVSLRKSLI 368
>gi|222097780|ref|YP_002531837.1| GTP-binding protein yqeh [Bacillus cereus Q1]
gi|221241838|gb|ACM14548.1| GTP-binding protein [Bacillus cereus Q1]
Length = 347
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 185/376 (49%), Gaps = 43/376 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 12 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGKSDA-LVVKIVDIFDF 61
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L + K+ +LVG K DL+P V ++ W+R+ AK
Sbjct: 62 NG--------SWLPGLHRFVGNNKV-------LLVGNKADLIPKSVKHDKVKHWMRYSAK 106
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ G + +V+V+G N GKST IN K+
Sbjct: 107 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS 164
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + + K++ K
Sbjct: 165 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKQSLKLITPTK 222
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 223 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 280
Query: 543 VGIRLQPPIGQ--DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
G L PP + + EL + + ++ T D+ +GLGW ++ G A +
Sbjct: 281 AGDLLSPPTPEELENMPELVKY-EFNIREPKT-------DVVFSGLGWVTVNEPG-AKIV 331
Query: 601 LWTYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 332 AHVPKGVSVSLRKSLI 347
>gi|336114443|ref|YP_004569210.1| nitric-oxide synthase [Bacillus coagulans 2-6]
gi|335367873|gb|AEH53824.1| Nitric-oxide synthase [Bacillus coagulans 2-6]
Length = 368
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 187/377 (49%), Gaps = 46/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NEV + + D DF +++ RL G +A +VV +VD DF
Sbjct: 34 EQVICQRCFRLKHY----NEVQDVPLTDDDFLKIL-NRL----GQVDA-LVVKIVDIFDF 83
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
+G F + A K+ ++L+G K DLLP V ++ W++
Sbjct: 84 NGSWLPGFHRFAGKN-------------------PVLLIGNKEDLLPKSVKRAKMANWMK 124
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
+AK G + V LVSA K G+ +A I++ + +V+V G N GKST IN
Sbjct: 125 QQAKELGLRPAD-VLLVSAAKGHGMDEAMAAIEQYRNGK-DVYVAGCTNVGKSTFINRII 182
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
++ + +T + PGTTL + IG L LYDTPG+++ H M+ + ++E K++
Sbjct: 183 RQATGEKDVITTSYFPGTTLDM--IGIPLDDGTSLYDTPGIINHHQMAHFVGKNELKVIT 240
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P +++ Q + GGL RLD + + + S + +H K+ENAD+++
Sbjct: 241 PKKEIKPAVFQLNERQTLFFGGLARLDYIKGGRRSF--VCYVSNALKIHRTKLENADDLY 298
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+G LQPP G+ A++ + + DI +GLGW ++ G A +
Sbjct: 299 ARQLGELLQPP-GKAEAADFPALVRHEFSIKEGK-----TDIVFSGLGWVTVNEPG-AVV 351
Query: 600 TLWTYDGIEITLREPLV 616
+ G+ + LR L+
Sbjct: 352 AAYVPKGVRVMLRRSLI 368
>gi|15672203|ref|NP_266377.1| GTP-binding protein YqeH [Lactococcus lactis subsp. lactis Il1403]
gi|12723078|gb|AAK04319.1|AE006260_2 GTP-binding protein [Lactococcus lactis subsp. lactis Il1403]
Length = 381
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 197/416 (47%), Gaps = 55/416 (13%)
Query: 202 GFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVK 261
GF PAG + +++ ER + + + + +A K E C RC LR+Y
Sbjct: 19 GFLPAGA----LKKKIAERDQMEAVQAGDEGSEA----SIKTEDLYCQRCFRLRHY---- 66
Query: 262 NEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG-MFPKRAAKSLFKKLE 320
NE+A + D DF RL+K G +A ++V VVD DF+G + P KL
Sbjct: 67 NEIAPTSLTDADF-----LRLLKEIGQHDA-LIVNVVDIFDFNGSLIPN------LHKLT 114
Query: 321 EAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARK 380
D L++V K D+LP + +L W+R +A A + K + + SA+
Sbjct: 115 GGND----------LLMVANKRDVLPKSLKVGKLTAWLREQA-ASRSLKPKDILVTSAQN 163
Query: 381 DLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLG 440
V L+ I+ R +V+V+G N GKSTLIN K +T + PGTTL
Sbjct: 164 KDDVAELMEAIEYYRRGR-DVYVVGVTNVGKSTLINAIIKSASGSEDVITTSRFPGTTLD 222
Query: 441 ILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVG 500
+ I L + L DTPG++H ++ L ++ K V RKE++P+TY++ Q + G
Sbjct: 223 KIEIP--LDEDSALIDTPGIIHRGQIAHYLEPEDLKYVSPRKEIKPKTYQLDPEQTLFFG 280
Query: 501 GLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELG 560
GL R D S E +T + +++H K+E A E ++ H G L P + +
Sbjct: 281 GLARFDF--ISGERQGMTAYFDNEINVHRTKLEGATEFYEKHKGELLAPALVGAKLVR-- 336
Query: 561 TWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
R+ K++ S DI +GLGW + K A + W +G+++ +R+ L+
Sbjct: 337 ----REFKITDKS------DIVFSGLGWVRVPQK--AVVAAWVPEGVDVVVRKALI 380
>gi|322392356|ref|ZP_08065817.1| GTP-binding protein [Streptococcus peroris ATCC 700780]
gi|321144891|gb|EFX40291.1| GTP-binding protein [Streptococcus peroris ATCC 700780]
Length = 368
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 190/391 (48%), Gaps = 55/391 (14%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLEIGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ +R ++ I+ R +V+V+G
Sbjct: 114 KSVKHGKISQWLMERAHEEGLRPVD-VVLTSAQNKQAIREVIDKIEYYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDV-NGIDIAAAG 585
LH K+E A++ + H+G L PP ++ K+ K+ +++ + D+ +G
Sbjct: 288 LHRTKLEGANDFYDKHLGTLLTPPNSKE--------KEDFPKLVEYVFNIKDKTDLVISG 339
Query: 586 LGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
LGW + + G A + +W +G+ + R+ ++
Sbjct: 340 LGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|406659581|ref|ZP_11067719.1| ribosome biogenesis GTPase YqeH [Streptococcus iniae 9117]
gi|405577690|gb|EKB51838.1| ribosome biogenesis GTPase YqeH [Streptococcus iniae 9117]
Length = 372
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 181/371 (48%), Gaps = 40/371 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+ + I D +F +L+ G+++A +VV V+D DF+G
Sbjct: 40 CQRCFRLRHY----NEITDVHISDDEF-----LKLLHEVGDSDA-LVVNVIDIFDFNG-- 87
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
+ + D ++LVG K D+LP V ++ +W+ RA G
Sbjct: 88 ---SVIPGLSRFVSGND----------VLLVGNKKDILPKSVKDGKVSQWLIERAHEEGL 134
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
++ V L SA+ ++ L+ I +L R +V+V+G N GKSTLIN ++
Sbjct: 135 RPVD-VILTSAQNKYAIKELIEKINQLRKGR-DVYVVGVTNVGKSTLINAIIQEVSGDKE 192
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL + I L ++DTPG++H H M+ L + K+V KE++P+
Sbjct: 193 VITTSRFPGTTLDKIEIP--LDDGTFIFDTPGIIHRHQMAHYLTDKDLKIVSPSKEIKPK 250
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ Q + GGL R D + I T + N+ LH K+E ADE + H+G L
Sbjct: 251 TYQLNPEQTLFFGGLGRFDFISGQRQGI--TAYFDNNLDLHRTKLEKADEFYLKHLGGLL 308
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYD 605
PP ++ ++ + V + ID+ +GLGW + + + + W +
Sbjct: 309 TPP-NMEQKNKFPALVPYEFVVK------DKIDLVFSGLGWIKINGSKDNVVKVAGWAPN 361
Query: 606 GIEITLREPLV 616
G+ + +R+ ++
Sbjct: 362 GVSVVIRKAII 372
>gi|418167351|ref|ZP_12804005.1| GTPase family protein [Streptococcus pneumoniae GA17971]
gi|353828517|gb|EHE08655.1| GTPase family protein [Streptococcus pneumoniae GA17971]
Length = 368
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 186/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|148994934|ref|ZP_01823936.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68]
gi|418149106|ref|ZP_12785868.1| GTPase family protein [Streptococcus pneumoniae GA13856]
gi|419453700|ref|ZP_13993670.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP03]
gi|419506630|ref|ZP_14046291.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA49194]
gi|421220833|ref|ZP_15677672.1| hypothetical protein AMCSP05_001569 [Streptococcus pneumoniae
2070425]
gi|421223087|ref|ZP_15679869.1| hypothetical protein AMCSP14_001511 [Streptococcus pneumoniae
2070531]
gi|147926936|gb|EDK77982.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68]
gi|353811442|gb|EHD91684.1| GTPase family protein [Streptococcus pneumoniae GA13856]
gi|379608544|gb|EHZ73290.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA49194]
gi|379625770|gb|EHZ90396.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP03]
gi|395586743|gb|EJG47110.1| hypothetical protein AMCSP05_001569 [Streptococcus pneumoniae
2070425]
gi|395587067|gb|EJG47429.1| hypothetical protein AMCSP14_001511 [Streptococcus pneumoniae
2070531]
Length = 368
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 186/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G++NA
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSNA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|414160964|ref|ZP_11417227.1| ribosome biogenesis GTPase YqeH [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410876643|gb|EKS24541.1| ribosome biogenesis GTPase YqeH [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 365
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 185/380 (48%), Gaps = 53/380 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + DF ++ K G+VV VVD DF
Sbjct: 32 EDVICQRCFRLKNY----NEIQDVGMDSQDFLDLLNHLADK------KGLVVNVVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 82 EGSFINALKRIVGNK---------------KVILAANKIDLLPKQINKRRVKDWLKKSAR 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G+++LL I++ + +V+++G N GKSTLIN ++
Sbjct: 127 KYGL-EAEDVVLISAEKGYGIQDLLEAIQQ-HRKQEDVYIVGTTNVGKSTLINKLIEQSV 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K + KE
Sbjct: 185 GEKNVVTTSRFPGTTLDLIDIP--LDDHSFMYDTPGVIQDHQMTHYVSEKELKQIMPNKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ Q + GGL R+D + + S N+ +H K E A+E+W+ +
Sbjct: 243 VKQRVYQLNEEQTLFFGGLARIDYVSGGKRPL--VCYFSNNLPIHRTKTEKANELWRTQL 300
Query: 544 GIRLQPPIGQD-------RASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
G L PP +D +A L T K+++ D+ AGLG+ ++G
Sbjct: 301 GKLLAPPSNKDDFNLDEMKAVRLETGKEKR-------------DVMIAGLGFITIG--PG 345
Query: 597 ASLTLWTYDGIEITLREPLV 616
A + + +++ LR ++
Sbjct: 346 AKVIVRVPKSVDVVLRNSIM 365
>gi|332686084|ref|YP_004455858.1| GTP-binding protein YqeH [Melissococcus plutonius ATCC 35311]
gi|332370093|dbj|BAK21049.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Melissococcus plutonius ATCC 35311]
Length = 369
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 185/384 (48%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E KEK E+ C RC LR+Y NE+ + + DF R++ N
Sbjct: 27 KSAYEKGKEKQEI-YCQRCFRLRHY----NEIQSVDLTNDDFLRLLNEL------NKEDA 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+++ +VD DFDG SL L ++ P ++L+G K D+LP +
Sbjct: 76 LIINLVDIFDFDG--------SLISSL------SRFVGNNP-ILLIGNKRDILPKSLKKH 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L +W++ RA G ++ + L+SA+ + LL I+ R +V+++G N GKS
Sbjct: 121 KLIKWMKERAYDEGLRPID-IQLISAKNPSEIVELLETIEYYRNGR-DVYIVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K+ + +T + PGTTL ++I L L DTPG++H + M+ L +
Sbjct: 179 TLINQIIKQTSGEEEVITTSQFPGTTLDKIKIP--LADGQFLIDTPGIIHHYQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
E K + +KE++P+ Y++ GQ + GG+ R D + + + +++H K+
Sbjct: 237 KELKKIMPKKEIKPKIYQLNAGQTLFFGGMARFDFIMGDRNSF--IAYLANGLTIHRTKM 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
NAD ++ H+G L+PP Q ++ + + S DI +GLGW ++
Sbjct: 295 ANADAFYEKHLGGLLEPP-NQKEVADFPELVRYEFSIKEKS------DIVFSGLGWITVT 347
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
G + W G+ + R+ L+
Sbjct: 348 SPG--IVAGWAPKGVSVLKRKALI 369
>gi|70726319|ref|YP_253233.1| GTP-binding protein YqeH [Staphylococcus haemolyticus JCSC1435]
gi|68447043|dbj|BAE04627.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 366
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 183/380 (48%), Gaps = 53/380 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY +++ D D L+ + G++V VVD DF
Sbjct: 33 EDVICQRCFRLKNYNEIQ---------DVGMDSEDFLNLLNELSD-RKGIIVNVVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 83 EGSFINALKRIVGNK---------------KIILAANKLDLLPKQINKRRVKDWLKKTAR 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA+K G+ +LL I + + +V+++G N GKSTLIN ++
Sbjct: 128 KYGLDA-DDVILISAQKGWGIDDLLTSIDQNRN-KQDVYIVGTTNVGKSTLINKLIEQSV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L K +YDTPG++ H M+ ++ E K + + E
Sbjct: 186 GEKDVVTTSRFPGTTLDLIDIP--LDEKTFMYDTPGIIQSHQMTHYVSEKELKTIVPKNE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R +++ GQ + GGL R+D + + S ++++H K E A+++W+N +
Sbjct: 244 IKQRVFQLNEGQTLFFGGLSRIDYVSGGKRPL--VCYFSNDLNIHRTKTEKANDLWRNQI 301
Query: 544 GIRLQPPIGQD-------RASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
G L PP D +A L T K++K DI +GLG+ + ++
Sbjct: 302 GNVLTPPNNPDHFDMSDTKAVRLETGKEKK-------------DIMISGLGFIT--IEAG 346
Query: 597 ASLTLWTYDGIEITLREPLV 616
A + + +++ LR ++
Sbjct: 347 AKVIVRVPKNVDVILRNSIM 366
>gi|423395365|ref|ZP_17372566.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-1]
gi|423406240|ref|ZP_17383389.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-3]
gi|401654776|gb|EJS72315.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-1]
gi|401660234|gb|EJS77716.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG2X1-3]
Length = 368
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 186/376 (49%), Gaps = 43/376 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGKSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKDDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRDGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + + K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKQSLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 244 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 301
Query: 543 VGIRLQPPIGQDRAS--ELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
G L PP ++ A+ EL + + ++ T D+ +GLGW ++ G A +
Sbjct: 302 AGDLLSPPTPEELANMPELVKY-EFNIREPKT-------DVVFSGLGWVTVNEPG-AKIV 352
Query: 601 LWTYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 353 AHVPKGVSVSLRKSLI 368
>gi|390453028|ref|ZP_10238556.1| hypothetical protein PpeoK3_03290 [Paenibacillus peoriae KCTC 3763]
Length = 375
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 183/373 (49%), Gaps = 36/373 (9%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC ++NY NE + + +F +L+ G+ +A +V+ +VD DF
Sbjct: 39 EPVICQRCFRIKNY----NETSSVAVDQDEF-----LKLLSQIGDKDA-LVIHIVDIFDF 88
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G SL L+ + P ++L K DLLP + ++ WV+ +AK
Sbjct: 89 EG--------SLISGLQ------RFVGSNP-VILAVNKTDLLPKVTNWNKVRNWVQKQAK 133
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + + L SA+K+ G LL + EL G R +V+V+GA N GKSTLIN +
Sbjct: 134 EQGL-RTADIVLCSAKKNQGFDRLLDVVSELRGNR-DVYVVGATNVGKSTLINRLIRDYS 191
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+LT + PGTTL ++ I L + DTPG+++P S ++R + + K
Sbjct: 192 DMEQELTTSRYPGTTLDMVNIP--LDDGKHIIDTPGIVYPWRFSEIVSRQDLSAIMPDKP 249
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+P Y++ GQ + GG+ R D + ++ T + + + +H K+E AD+++ +H
Sbjct: 250 LKPAAYQLDFGQTLFFGGMGRFDFIEGQHQSF--TCYINGGLKIHRTKLERADQLFADHA 307
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP +D+ +E+ W + +V + DI +GLGW + A + +
Sbjct: 308 GELLSPPT-RDQLAEMPEWTRHEFRVPRKTPS----DIYISGLGWIRVNSDSGALVAVHV 362
Query: 604 YDGIEITLREPLV 616
GI + LR L+
Sbjct: 363 PRGIRVLLRPALI 375
>gi|152976765|ref|YP_001376282.1| GTP-binding protein YqeH [Bacillus cytotoxicus NVH 391-98]
gi|152025517|gb|ABS23287.1| Nitric-oxide synthase [Bacillus cytotoxicus NVH 391-98]
Length = 368
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 186/383 (48%), Gaps = 42/383 (10%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A QKE+ +C RC L+NY NE+ + + D DF R++ G + A +V
Sbjct: 27 ASSLQKEQ---VICQRCFRLKNY----NEIQDVSLTDDDF-----LRILNGIGQSEA-LV 73
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
V +VD DF+G S L + K+ +LVG K DL+P V ++
Sbjct: 74 VKIVDIFDFNG--------SWLPGLHRFVGNNKV-------LLVGNKADLIPKSVKHDKM 118
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
W+R+ AK G K V+L+SA K G++ L I++ + +V+V+G N GKST
Sbjct: 119 KHWMRYSAKQLGL-KAEDVFLISAAKGQGIQELAEAIEKYRNGK-DVYVVGCTNVGKSTF 176
Query: 415 INTFAKKEGVKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
IN K+ + +T + PGTTL ++ I L + LYDTPG+++ H M+ + +
Sbjct: 177 INRMIKEFSEETENVITTSHFPGTTLDLIDIP--LDDTSSLYDTPGIINHHQMAHYVGKQ 234
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIE 533
K++ KE++P +++ Q + GL R D + T + S +++H K+E
Sbjct: 235 SLKIITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRSF--TCYFSNRLTIHRTKLE 292
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGL 593
AD++ + H G L PP ++ S + + + + DV +GLGW ++
Sbjct: 293 KADQLHEKHAGELLNPPTPEELES-MPEFVKYEFNIREPKTDV-----VFSGLGWVTVNE 346
Query: 594 KGEASLTLWTYDGIEITLREPLV 616
G A + G+ ++LR+ L+
Sbjct: 347 PG-AKIVAHIPKGVSVSLRKSLI 368
>gi|333905648|ref|YP_004479519.1| GTP-binding protein [Streptococcus parauberis KCTC 11537]
gi|333120913|gb|AEF25847.1| GTP-binding protein [Streptococcus parauberis KCTC 11537]
gi|457096140|gb|EMG26611.1| GTP-binding protein [Streptococcus parauberis KRS-02083]
Length = 372
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 187/378 (49%), Gaps = 41/378 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+ + I D +F +L+ G+++A +V+ V+D
Sbjct: 34 ETGEL-YCQRCFRLRHY----NEITDVNISDEEF-----LKLLHEVGDSDA-LVINVIDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G + + D ++LVG K+D+LP V ++ +W+
Sbjct: 83 FDFNG-----SVIPGLSRFVSGND----------VLLVGNKMDILPKSVKEGKVTQWLTE 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G L+ V L SA+ + ++ L+ I +L R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGLRPLD-VILTSAQNNNAIKELIEKINQLRKGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL + I L ++DTPG++H + M+ L + K +
Sbjct: 186 EITGDKDIITTSRFPGTTLDKIEIP--LDDGTFIFDTPGIIHRYQMAHFLTAKDLKYISP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GGL R D + T + N+++H K+E A E ++
Sbjct: 244 KKEIKPKTYQLNSEQTLFLGGLGRFDFISGDKQGF--TAYFDNNLTVHRTKLEGASEFYQ 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H+G+ L PP D+ + + +S + D+ +GLGW + +A +
Sbjct: 302 KHLGLLLTPPGPADK-EDFPKLVPHEFTISDKT------DLVFSGLGWLRINGSKDAPVR 354
Query: 601 L--WTYDGIEITLREPLV 616
+ W G+ + R+ ++
Sbjct: 355 IAGWAPKGVSVLTRKAII 372
>gi|418325685|ref|ZP_12936891.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU071]
gi|365228287|gb|EHM69472.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU071]
Length = 366
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 174/348 (50%), Gaps = 37/348 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NEV + + DF ++ K G++V VVD DF
Sbjct: 33 EDVICRRCFRLKNY----NEVQDVGMESEDFLNLLTGLSEK------KGIIVNVVDVFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++LV K+DLLP Q++ R+ W+R A+
Sbjct: 83 EGSFINAIQRIVGNK---------------KIILVANKIDLLPKQINQRRVKEWLRKSAR 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G+ LL I + + +V+++G N GKSTLIN ++
Sbjct: 128 KYGL-EAEDVVLISANKGWGIDELLQSINHVRN-KDDVYIVGTTNVGKSTLINKLIEQSV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L K+ ++DTPG++ H M+ ++ +E K++ + E
Sbjct: 186 GEKDVVTTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQMTNYVSENELKIIIPKNE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ Q + GGL R+D + + S ++++H K E A+++WK+ +
Sbjct: 244 IKQRVYQLNEKQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWKSQL 301
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
G L PP + + L K +L+ T DI +GLG+ ++
Sbjct: 302 GALLSPP-QEAQQFNLNDVKAVRLETGKTKR-----DIMISGLGFITI 343
>gi|335357147|ref|ZP_08549017.1| GTPase YqeH [Lactobacillus animalis KCTC 3501]
Length = 371
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 174/370 (47%), Gaps = 42/370 (11%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NEVA+ + D DF RL+ G +A ++V VVD DF+G
Sbjct: 43 CQRCFRLRHY----NEVADVSLTDDDF-----LRLLNQIGQTDA-LIVNVVDIFDFNG-- 90
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
SL L D + +LVG K DLLP + +++ W+R A G
Sbjct: 91 ------SLIPGLHRFVGDNPV-------LLVGNKEDLLPHSLKRSKIKDWMRQEANKQGL 137
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE-GVKV 426
++ V L SA++ + +LL I + R +V+V+G N GKSTLIN + GVK
Sbjct: 138 RPVD-VALTSAKRGKDLEDLLELIDKYREGR-DVYVVGVTNVGKSTLINRIINQTTGVK- 194
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+T + PGTTL RI L DTPG++H H M+ L+ ++ +KE++P
Sbjct: 195 DLITTSRFPGTTLD--RIEIPFGDGHFLIDTPGIIHKHQMAHYLSPKALRLAAPQKEIKP 252
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
+ Y++ GQ + G L R D + V V+ N+ +H K E A E + H G
Sbjct: 253 KVYQLNEGQTLFFGALARFDYISGGKQG--VIVYTDNNLMIHRTKTEKATEFYAKHAGTL 310
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L PP ++ KD V D+ AGLGW + +K + + W +G
Sbjct: 311 LTPPTAEE-------MKDFPKLVRFEFKTTEKSDLVFAGLGWVT--VKANSVVAGWAPEG 361
Query: 607 IEITLREPLV 616
+ + LR +V
Sbjct: 362 VAVILRRAMV 371
>gi|417912142|ref|ZP_12555837.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU105]
gi|420187200|ref|ZP_14693221.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM039]
gi|341651153|gb|EGS74958.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU105]
gi|394256179|gb|EJE01112.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM039]
Length = 366
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 175/349 (50%), Gaps = 39/349 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NEV + + DF ++ K G++V VVD DF
Sbjct: 33 EDVICRRCFRLKNY----NEVQDVGMESEDFLNLLTGLSEK------KGIIVNVVDVFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++LV K+DLLP Q++ R+ W+R A+
Sbjct: 83 EGSFINAIQRIVGNK---------------KIILVANKIDLLPKQINHRRVKEWLRKSAR 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G+ LL I + + +V+++G N GKSTLIN ++
Sbjct: 128 KYGL-EAEDVVLISANKGWGIDELLQSINHVRN-KDDVYIVGTTNVGKSTLINKLIEQSV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L K+ ++DTPG++ H M+ ++ +E K++ + E
Sbjct: 186 GEKDVVTTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQMTNYVSENELKIIIPKNE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ Q + GGL R+D + + S ++++H K E A+++WK+ +
Sbjct: 244 IKQRVYQLNEKQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWKSQL 301
Query: 544 GIRLQPPIGQD-RASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
G L PP QD + L K +L+ T DI +GLG+ ++
Sbjct: 302 GALLSPP--QDAQQFNLNDVKAVRLETGKTKR-----DIMISGLGFITI 343
>gi|417647043|ref|ZP_12296892.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU144]
gi|329725392|gb|EGG61875.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU144]
Length = 366
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 175/349 (50%), Gaps = 39/349 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NEV + + DF ++ K G++V VVD DF
Sbjct: 33 EDVICRRCFRLKNY----NEVQDVGMESEDFLNLLTGLSEK------KGIIVNVVDVFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++LV K+DLLP Q++ R+ W+R A+
Sbjct: 83 EGSFINAIQRIVGNK---------------KIILVANKIDLLPKQINHRRVKEWLRKSAR 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G+ LL I + + +V+++G N GKSTLIN ++
Sbjct: 128 KYGL-EAEDVVLISANKGWGIDELLQSINHVRN-KDDVYIVGTTNVGKSTLINKLIEQSV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L K+ ++DTPG++ H M+ ++ +E K++ + E
Sbjct: 186 GEKDVVTTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQMTNYVSENELKIIIPKNE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ Q + GGL R+D + + S ++++H K E A+++WK+ +
Sbjct: 244 IKQRVYQLNEKQTLFFGGLARIDYVSGGNRPL--VCFFSNDLNIHRTKTEKANDLWKSQL 301
Query: 544 GIRLQPPIGQD-RASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
G L PP QD + L K +L+ T DI +GLG+ ++
Sbjct: 302 GALLSPP--QDAQQFNLNDVKAVRLETGKTKR-----DIMISGLGFITI 343
>gi|27468201|ref|NP_764838.1| GTP-binding protein YqeH [Staphylococcus epidermidis ATCC 12228]
gi|57867067|ref|YP_188740.1| GTP-binding protein YqeH [Staphylococcus epidermidis RP62A]
gi|251811013|ref|ZP_04825486.1| GTP-binding protein [Staphylococcus epidermidis BCM-HMP0060]
gi|282875975|ref|ZP_06284842.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis SK135]
gi|293366443|ref|ZP_06613120.1| GTP-binding protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|416125334|ref|ZP_11595932.1| putative GTPase [Staphylococcus epidermidis FRI909]
gi|417656084|ref|ZP_12305775.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU028]
gi|417659637|ref|ZP_12309237.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU045]
gi|417908576|ref|ZP_12552333.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU037]
gi|417913661|ref|ZP_12557324.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU109]
gi|418327846|ref|ZP_12938983.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
14.1.R1.SE]
gi|418605462|ref|ZP_13168786.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU041]
gi|418606028|ref|ZP_13169324.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU057]
gi|418609488|ref|ZP_13172640.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU065]
gi|418612812|ref|ZP_13175836.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU117]
gi|418616314|ref|ZP_13179239.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU120]
gi|418625289|ref|ZP_13187942.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU125]
gi|418626395|ref|ZP_13189007.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU126]
gi|418629354|ref|ZP_13191862.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU127]
gi|418631444|ref|ZP_13193907.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU128]
gi|418665185|ref|ZP_13226635.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU081]
gi|419771845|ref|ZP_14297891.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-K]
gi|420163034|ref|ZP_14669781.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM095]
gi|420167993|ref|ZP_14674645.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM087]
gi|420170303|ref|ZP_14676864.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM070]
gi|420172649|ref|ZP_14679148.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM067]
gi|420183258|ref|ZP_14689391.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM049]
gi|420194894|ref|ZP_14700691.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM021]
gi|420197475|ref|ZP_14703199.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM020]
gi|420199838|ref|ZP_14705508.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM031]
gi|420202364|ref|ZP_14707957.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM018]
gi|420209102|ref|ZP_14714540.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM003]
gi|420211258|ref|ZP_14716632.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM001]
gi|420214056|ref|ZP_14719336.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05005]
gi|420216206|ref|ZP_14721422.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05001]
gi|420220542|ref|ZP_14725501.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH04008]
gi|420221618|ref|ZP_14726545.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH08001]
gi|420225793|ref|ZP_14730620.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH06004]
gi|420227386|ref|ZP_14732155.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05003]
gi|420229700|ref|ZP_14734405.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH04003]
gi|420232111|ref|ZP_14736753.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH051668]
gi|420234758|ref|ZP_14739318.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH051475]
gi|421606909|ref|ZP_16048160.1| GTPase YqeH [Staphylococcus epidermidis AU12-03]
gi|27315747|gb|AAO04882.1|AE016748_116 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57637725|gb|AAW54513.1| GTP-binding protein, putative [Staphylococcus epidermidis RP62A]
gi|251805523|gb|EES58180.1| GTP-binding protein [Staphylococcus epidermidis BCM-HMP0060]
gi|281295000|gb|EFA87527.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis SK135]
gi|291319212|gb|EFE59581.1| GTP-binding protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|319400931|gb|EFV89150.1| putative GTPase [Staphylococcus epidermidis FRI909]
gi|329735274|gb|EGG71566.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU045]
gi|329737334|gb|EGG73588.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU028]
gi|341654683|gb|EGS78421.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU109]
gi|341655937|gb|EGS79660.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU037]
gi|365232624|gb|EHM73615.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
14.1.R1.SE]
gi|374402351|gb|EHQ73381.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU041]
gi|374407702|gb|EHQ78554.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU065]
gi|374409160|gb|EHQ79960.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU081]
gi|374409467|gb|EHQ80258.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU057]
gi|374817889|gb|EHR82064.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU117]
gi|374821140|gb|EHR85207.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU120]
gi|374825431|gb|EHR89367.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU125]
gi|374832829|gb|EHR96534.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU126]
gi|374834057|gb|EHR97717.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU127]
gi|374835335|gb|EHR98951.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU128]
gi|383360664|gb|EID38059.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-K]
gi|394234723|gb|EJD80297.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM095]
gi|394238021|gb|EJD83507.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM087]
gi|394240641|gb|EJD86064.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM070]
gi|394241810|gb|EJD87219.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM067]
gi|394249721|gb|EJD94934.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM049]
gi|394263954|gb|EJE08675.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM021]
gi|394266282|gb|EJE10928.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM020]
gi|394269772|gb|EJE14302.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM018]
gi|394271245|gb|EJE15741.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM031]
gi|394279330|gb|EJE23638.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM003]
gi|394281711|gb|EJE25937.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM001]
gi|394283978|gb|EJE28139.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05005]
gi|394285895|gb|EJE29961.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH04008]
gi|394290244|gb|EJE34108.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH08001]
gi|394292296|gb|EJE36055.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05001]
gi|394293227|gb|EJE36950.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH06004]
gi|394297192|gb|EJE40801.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH05003]
gi|394298994|gb|EJE42549.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH04003]
gi|394301833|gb|EJE45287.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH051668]
gi|394304001|gb|EJE47411.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIH051475]
gi|406657378|gb|EKC83766.1| GTPase YqeH [Staphylococcus epidermidis AU12-03]
Length = 366
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 175/349 (50%), Gaps = 39/349 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NEV + + DF ++ K G++V VVD DF
Sbjct: 33 EDVICRRCFRLKNY----NEVQDVGMESEDFLNLLTGLSEK------KGIIVNVVDVFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++LV K+DLLP Q++ R+ W+R A+
Sbjct: 83 EGSFINAIQRIVGNK---------------KIILVANKIDLLPKQINHRRVKEWLRKSAR 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G+ LL I + + +V+++G N GKSTLIN ++
Sbjct: 128 KYGL-EAEDVVLISANKGWGIDELLQSINHVRN-KDDVYIVGTTNVGKSTLINKLIEQSV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L K+ ++DTPG++ H M+ ++ +E K++ + E
Sbjct: 186 GEKDVVTTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQMTNYVSENELKIIIPKNE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ Q + GGL R+D + + S ++++H K E A+++WK+ +
Sbjct: 244 IKQRVYQLNEKQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWKSQL 301
Query: 544 GIRLQPPIGQD-RASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
G L PP QD + L K +L+ T DI +GLG+ ++
Sbjct: 302 GALLSPP--QDAQQFNLNDVKAVRLETGKTKR-----DIMISGLGFITI 343
>gi|299822864|ref|ZP_07054750.1| ribosome biogenesis GTPase YqeH [Listeria grayi DSM 20601]
gi|299816393|gb|EFI83631.1| ribosome biogenesis GTPase YqeH [Listeria grayi DSM 20601]
Length = 366
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 183/373 (49%), Gaps = 39/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
+ +C RC L++Y NE+ + + D DF +++ T A ++V VVD DF
Sbjct: 33 DTIICRRCFRLKHY----NEIQDVSLTDDDFLKILNTI------GAKKALIVYVVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
DG S L D + +LVG K DLLP + +L +W+R R++
Sbjct: 83 DG--------SWLPGLNRFAGDNPV-------LLVGNKADLLPKSLKHDKLIKWMRGRSR 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V LVSA K+ G LL I +L G +V+++G N GKSTLIN K+
Sbjct: 128 ELGLQAKDAV-LVSAEKNTGFDELLDTIDDLRGGE-DVYIVGCTNVGKSTLINQIIKRAS 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + +T + PGTTL + I L L DTPG+++ H M+ ++ K++ + E
Sbjct: 186 GESNVVTTSQFPGTTLDKIEIP--LADGKLLVDTPGIINHHQMAHFVSGKTLKLMMPKSE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P +++ Q + G L RLD + ++ V+ S + H K+E A ++++
Sbjct: 244 IKPLVFQLNEEQTLFFGALARLDYESGGRKSF--VVYMSNQLKTHRTKLEKATQLYETQA 301
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP ++ A +L + ++ DI +GLGW ++ +G A +T W
Sbjct: 302 GEVLAPPTKEEIA-DLPKLVPYQFQLKEKQ------DIVFSGLGWVTVP-EGNAKVTAWV 353
Query: 604 YDGIEITLREPLV 616
+G+ +++R LV
Sbjct: 354 PEGVNVSIRRSLV 366
>gi|229104967|ref|ZP_04235623.1| hypothetical protein bcere0019_41050 [Bacillus cereus Rock3-28]
gi|423615323|ref|ZP_17591157.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD115]
gi|228678461|gb|EEL32682.1| hypothetical protein bcere0019_41050 [Bacillus cereus Rock3-28]
gi|401261002|gb|EJR67169.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD115]
Length = 368
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 185/376 (49%), Gaps = 43/376 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGKSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRDGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + ++ K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKESLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 244 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 301
Query: 543 VGIRLQPPIGQ--DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
G L PP + + EL + + ++ T D+ +GLGW ++ G A +
Sbjct: 302 AGDLLSPPTPEELENMPELVKY-EFNIREPKT-------DVVFSGLGWVTVNESG-AKIV 352
Query: 601 LWTYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 353 AHVPKGVSVSLRKSLI 368
>gi|329116389|ref|ZP_08245106.1| ribosome biogenesis GTPase YqeH [Streptococcus parauberis NCFD
2020]
gi|326906794|gb|EGE53708.1| ribosome biogenesis GTPase YqeH [Streptococcus parauberis NCFD
2020]
Length = 372
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 185/378 (48%), Gaps = 41/378 (10%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+ + I D +F +L+ G+++A +V+ V+D
Sbjct: 34 ETGEL-YCQRCFRLRHY----NEITDVNISDEEF-----LKLLHEVGDSDA-LVINVIDI 82
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G + + D ++LVG K D+LP V ++ +W+
Sbjct: 83 FDFNG-----SVIPGLSRFVSGND----------VLLVGNKKDILPKSVKEGKVTQWLTE 127
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G L+ V L SA+ + ++ L+ I +L R +V+V+G N GKSTLIN +
Sbjct: 128 RAHEEGLRPLD-VILTSAQNNNAIKELIEKINQLRKGR-DVYVVGVTNVGKSTLINAIIQ 185
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ +T + PGTTL + I L ++DTPG++H H M+ L + K +
Sbjct: 186 EITGDKDIITTSRFPGTTLDKIEIP--LDDGTFIFDTPGIIHRHQMAHFLTAKDLKYISP 243
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P+TY++ Q + +GGL R D + T + N+ +H K+E A E ++
Sbjct: 244 KKEIKPKTYQLNSEQTLFLGGLGRFDFISGDKQGF--TAYFDNNLMVHRTKLEGASEFYQ 301
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H+G+ L PP D+ + + +S + D+ +GLGW + +A +
Sbjct: 302 KHLGLLLTPPGPADK-EDFPKLVPHEFTISDKT------DLVFSGLGWLRINGSKDAPVR 354
Query: 601 L--WTYDGIEITLREPLV 616
+ W G+ + R+ ++
Sbjct: 355 IAGWAPKGVSVLTRKAII 372
>gi|379727858|ref|YP_005320043.1| GTP-binding protein YqeH [Melissococcus plutonius DAT561]
gi|376318761|dbj|BAL62548.1| GTP-binding protein YqeH [Melissococcus plutonius DAT561]
Length = 369
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 184/384 (47%), Gaps = 41/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E KEK E+ C RC LR+Y NE+ + + DF R++ N
Sbjct: 27 KSAYEKGKEKQEI-YCQRCFRLRHY----NEIQSVDLTNDDFLRLLNEL------NKEDA 75
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+++ +VD DFDG SL L ++ P ++L+G K D+LP +
Sbjct: 76 LIINLVDIFDFDG--------SLISSL------SRFVGNNP-ILLIGNKRDILPKSLKKH 120
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L +W++ RA G ++ + L+SA+ + LL I+ R +V+++G N GKS
Sbjct: 121 KLIKWMKERAYDEGLRPID-IQLISAKNPSEIVELLETIEYYRNGR-DVYIVGVTNVGKS 178
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K+ + +T + PGTTL ++I L L DTPG++H H M+ L +
Sbjct: 179 TLINQIIKQTSGEEEVITTSQFPGTTLDKIKIP--LADGQFLIDTPGIIHHHQMAHYLGK 236
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
E K + +KE++P+ Y++ GQ + GG+ R D + + + ++++H K+
Sbjct: 237 KELKKIMPQKEIKPKIYQLNAGQILFFGGMARFDFIMGDRNSF--IAYLANDLTIHRTKM 294
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
NAD + H+G L+PP Q + + + S DI +GLGW ++
Sbjct: 295 ANADAFYGKHLGGLLEPP-NQKEVAGFPELVRYEFSIKEKS------DIVFSGLGWITVT 347
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
G + W G+ + R+ L+
Sbjct: 348 SPG--IVAGWAPKGVSVLKRKALI 369
>gi|418146990|ref|ZP_12783768.1| GTPase family protein [Streptococcus pneumoniae GA13637]
gi|353812565|gb|EHD92800.1| GTPase family protein [Streptococcus pneumoniae GA13637]
Length = 368
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 186/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMRRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|242242875|ref|ZP_04797320.1| GTP-binding protein [Staphylococcus epidermidis W23144]
gi|418615653|ref|ZP_13178592.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU118]
gi|418633478|ref|ZP_13195891.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU129]
gi|420174637|ref|ZP_14681086.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM061]
gi|420190211|ref|ZP_14696155.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM037]
gi|420192348|ref|ZP_14698208.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM023]
gi|420204515|ref|ZP_14710073.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM015]
gi|242233650|gb|EES35962.1| GTP-binding protein [Staphylococcus epidermidis W23144]
gi|374816703|gb|EHR80902.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU118]
gi|374839231|gb|EHS02749.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU129]
gi|394244868|gb|EJD90200.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM061]
gi|394259102|gb|EJE03972.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM037]
gi|394261559|gb|EJE06356.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM023]
gi|394273525|gb|EJE17956.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM015]
Length = 366
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 175/349 (50%), Gaps = 39/349 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NEV + + DF ++ K G++V VVD DF
Sbjct: 33 EDVICRRCFRLKNY----NEVQDVGMESEDFLNLLTGLSEK------KGIIVNVVDVFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++LV K+DLLP Q++ R+ W+R A+
Sbjct: 83 EGSFINAIQRIVGNK---------------KIILVANKIDLLPKQINHRRVKEWLRKSAR 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G+ LL I + + +V+++G N GKSTLIN ++
Sbjct: 128 KYGL-EAEDVVLISANKGWGIDELLQSINHVRN-KDDVYIVGTTNVGKSTLINKLIEQSV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L K+ ++DTPG++ H M+ ++ +E K++ + E
Sbjct: 186 GEKDVVTTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQMTNYVSENELKIIIPKNE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ Q + GGL R+D + + S ++++H K E A+++WK+ +
Sbjct: 244 VKQRVYQLNEKQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWKSQL 301
Query: 544 GIRLQPPIGQD-RASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
G L PP QD + L K +L+ T DI +GLG+ ++
Sbjct: 302 GALLSPP--QDAQQFNLNDVKAVRLETGKTKR-----DIMISGLGFITI 343
>gi|225861571|ref|YP_002743080.1| GTP-binding protein YqeH [Streptococcus pneumoniae Taiwan19F-14]
gi|298230643|ref|ZP_06964324.1| GTP-binding protein YqeH [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254887|ref|ZP_06978473.1| GTP-binding protein YqeH [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298503494|ref|YP_003725434.1| GTP-binding protein [Streptococcus pneumoniae TCH8431/19A]
gi|387788790|ref|YP_006253858.1| GTP-binding protein YqeH [Streptococcus pneumoniae ST556]
gi|417313225|ref|ZP_12099937.1| GTPase family protein [Streptococcus pneumoniae GA04375]
gi|417696913|ref|ZP_12346091.1| GTPase family protein [Streptococcus pneumoniae GA47368]
gi|418083554|ref|ZP_12720751.1| hypothetical protein SPAR81_1644 [Streptococcus pneumoniae GA44288]
gi|418085738|ref|ZP_12722917.1| hypothetical protein SPAR90_1643 [Streptococcus pneumoniae GA47281]
gi|418092354|ref|ZP_12729494.1| hypothetical protein SPAR84_1728 [Streptococcus pneumoniae GA44452]
gi|418094540|ref|ZP_12731667.1| hypothetical protein SPAR110_1668 [Streptococcus pneumoniae
GA49138]
gi|418101207|ref|ZP_12738290.1| hypothetical protein SPAR128_1626 [Streptococcus pneumoniae
7286-06]
gi|418110719|ref|ZP_12747738.1| hypothetical protein SPAR113_1792 [Streptococcus pneumoniae
GA49447]
gi|418119198|ref|ZP_12756155.1| hypothetical protein SPAR54_1239 [Streptococcus pneumoniae GA18523]
gi|418142264|ref|ZP_12779076.1| GTPase family protein [Streptococcus pneumoniae GA13455]
gi|418151253|ref|ZP_12787999.1| GTPase family protein [Streptococcus pneumoniae GA14798]
gi|418153491|ref|ZP_12790229.1| GTPase family protein [Streptococcus pneumoniae GA16121]
gi|418169850|ref|ZP_12806491.1| GTPase family protein [Streptococcus pneumoniae GA19077]
gi|418171883|ref|ZP_12808507.1| GTPase family protein [Streptococcus pneumoniae GA19451]
gi|418196404|ref|ZP_12832880.1| GTPase family protein [Streptococcus pneumoniae GA47688]
gi|418198573|ref|ZP_12835031.1| GTPase family protein [Streptococcus pneumoniae GA47778]
gi|418221782|ref|ZP_12848435.1| hypothetical protein SPAR104_1715 [Streptococcus pneumoniae
GA47751]
gi|418223946|ref|ZP_12850586.1| hypothetical protein SPAR127_1647 [Streptococcus pneumoniae
5185-06]
gi|419423654|ref|ZP_13963867.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA43264]
gi|419425687|ref|ZP_13965883.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 7533-05]
gi|419427799|ref|ZP_13967980.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 5652-06]
gi|419429945|ref|ZP_13970109.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA11856]
gi|419436543|ref|ZP_13976630.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 8190-05]
gi|419438785|ref|ZP_13978853.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13499]
gi|419445250|ref|ZP_13985265.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19923]
gi|419447406|ref|ZP_13987411.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 7879-04]
gi|419449531|ref|ZP_13989527.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 4075-00]
gi|419450874|ref|ZP_13990860.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP02]
gi|419489279|ref|ZP_14029028.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA44386]
gi|419502399|ref|ZP_14042083.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47628]
gi|419519457|ref|ZP_14059063.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA08825]
gi|419528086|ref|ZP_14067629.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17719]
gi|421273405|ref|ZP_15724245.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR55]
gi|421288015|ref|ZP_15738778.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58771]
gi|225726735|gb|ACO22586.1| GTP-binding protein [Streptococcus pneumoniae Taiwan19F-14]
gi|298239089|gb|ADI70220.1| GTP-binding protein [Streptococcus pneumoniae TCH8431/19A]
gi|327389933|gb|EGE88278.1| GTPase family protein [Streptococcus pneumoniae GA04375]
gi|332200311|gb|EGJ14384.1| GTPase family protein [Streptococcus pneumoniae GA47368]
gi|353754774|gb|EHD35386.1| hypothetical protein SPAR81_1644 [Streptococcus pneumoniae GA44288]
gi|353756447|gb|EHD37048.1| hypothetical protein SPAR90_1643 [Streptococcus pneumoniae GA47281]
gi|353763054|gb|EHD43611.1| hypothetical protein SPAR84_1728 [Streptococcus pneumoniae GA44452]
gi|353765036|gb|EHD45584.1| hypothetical protein SPAR110_1668 [Streptococcus pneumoniae
GA49138]
gi|353770707|gb|EHD51219.1| hypothetical protein SPAR128_1626 [Streptococcus pneumoniae
7286-06]
gi|353781340|gb|EHD61785.1| hypothetical protein SPAR113_1792 [Streptococcus pneumoniae
GA49447]
gi|353791150|gb|EHD71531.1| hypothetical protein SPAR54_1239 [Streptococcus pneumoniae GA18523]
gi|353804497|gb|EHD84778.1| GTPase family protein [Streptococcus pneumoniae GA13455]
gi|353814463|gb|EHD94689.1| GTPase family protein [Streptococcus pneumoniae GA14798]
gi|353817042|gb|EHD97250.1| GTPase family protein [Streptococcus pneumoniae GA16121]
gi|353833829|gb|EHE13937.1| GTPase family protein [Streptococcus pneumoniae GA19077]
gi|353835620|gb|EHE15714.1| GTPase family protein [Streptococcus pneumoniae GA19451]
gi|353860415|gb|EHE40360.1| GTPase family protein [Streptococcus pneumoniae GA47688]
gi|353861683|gb|EHE41618.1| GTPase family protein [Streptococcus pneumoniae GA47778]
gi|353875092|gb|EHE54946.1| hypothetical protein SPAR104_1715 [Streptococcus pneumoniae
GA47751]
gi|353878744|gb|EHE58574.1| hypothetical protein SPAR127_1647 [Streptococcus pneumoniae
5185-06]
gi|379138532|gb|AFC95323.1| GTP-binding protein YqeH [Streptococcus pneumoniae ST556]
gi|379537192|gb|EHZ02377.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA13499]
gi|379550123|gb|EHZ15225.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA11856]
gi|379566239|gb|EHZ31230.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17719]
gi|379572943|gb|EHZ37900.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19923]
gi|379586226|gb|EHZ51080.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA43264]
gi|379586821|gb|EHZ51671.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA44386]
gi|379600612|gb|EHZ65393.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47628]
gi|379612982|gb|EHZ77697.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 8190-05]
gi|379614946|gb|EHZ79656.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 7879-04]
gi|379617992|gb|EHZ82672.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 5652-06]
gi|379619148|gb|EHZ83822.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 7533-05]
gi|379622149|gb|EHZ86785.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae 4075-00]
gi|379622579|gb|EHZ87213.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP02]
gi|379641294|gb|EIA05832.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA08825]
gi|395873836|gb|EJG84926.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR55]
gi|395886578|gb|EJG97594.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58771]
Length = 368
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 187/396 (47%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + +R+ ++
Sbjct: 335 LVISGLGW--IRVTGIAKVAVWAPEGVAVVIRKAII 368
>gi|223932251|ref|ZP_03624255.1| Nitric-oxide synthase [Streptococcus suis 89/1591]
gi|223899232|gb|EEF65589.1| Nitric-oxide synthase [Streptococcus suis 89/1591]
Length = 368
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 187/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E G++ C RC LR+Y NE+++ I D DF +L+ G ++A
Sbjct: 26 QSALEKGLETGQL-YCQRCFRLRHY----NEISDVNISDDDF-----LKLLHSVGESDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ + LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFISGNDVLLVGNKQDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G
Sbjct: 114 KSVKTGKVTQWLTERAHEIGMRPVD-VVLTSAQNKQAIKDLIEKIEQHRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K + RKE++P+TY++ Q + + GL R D + E T + +
Sbjct: 230 AHYLTAKNLKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDF--VAGERQGFTAFFDNELQ 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K++ A E ++ H G L PPI ++ E + ++ + D+ +GL
Sbjct: 288 LHRTKLQGASEFYQKHAGSLLVPPISKE-LKEFPELVRHEFTINEKT------DVVFSGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + K A + W G+++ +R+ ++
Sbjct: 341 GWIRVNEK--AKIAAWAPKGVDVVIRKAII 368
>gi|415692715|ref|ZP_11454635.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS03]
gi|315129875|gb|EFT85865.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS03]
Length = 366
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 177/350 (50%), Gaps = 43/350 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD F+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFYFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLIEAS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDESSFMYDTPGIIQDHQMTHLVSEKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D + + S ++++H K E A+++W+N
Sbjct: 243 EIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+G L PP G + +L K +L+ DV +GLG+ ++G
Sbjct: 301 LGDLLTPP-GNPQNFDLNELKAVRLETGKEKRDV-----MISGLGFITIG 344
>gi|229076010|ref|ZP_04208983.1| hypothetical protein bcere0024_40490 [Bacillus cereus Rock4-18]
gi|229098807|ref|ZP_04229745.1| hypothetical protein bcere0020_40330 [Bacillus cereus Rock3-29]
gi|407706863|ref|YP_006830448.1| stage IV sporulation protein FA [Bacillus thuringiensis MC28]
gi|423440915|ref|ZP_17417821.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4X2-1]
gi|423448917|ref|ZP_17425796.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5O-1]
gi|423463980|ref|ZP_17440748.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6O-1]
gi|423533343|ref|ZP_17509761.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB2-9]
gi|423541402|ref|ZP_17517793.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB4-10]
gi|228684651|gb|EEL38591.1| hypothetical protein bcere0020_40330 [Bacillus cereus Rock3-29]
gi|228707122|gb|EEL59322.1| hypothetical protein bcere0024_40490 [Bacillus cereus Rock4-18]
gi|401129511|gb|EJQ37194.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5O-1]
gi|401172590|gb|EJQ79811.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB4-10]
gi|402417576|gb|EJV49876.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG4X2-1]
gi|402420247|gb|EJV52518.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6O-1]
gi|402463562|gb|EJV95262.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuB2-9]
gi|407384548|gb|AFU15049.1| Yqeh Gtpase [Bacillus thuringiensis MC28]
Length = 368
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 185/376 (49%), Gaps = 43/376 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGRSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRDGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + ++ K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKESLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 244 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 301
Query: 543 VGIRLQPPIGQ--DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
G L PP + + EL + + ++ T D+ +GLGW ++ G A +
Sbjct: 302 AGDLLSPPTPEELENMPELVKY-EFNIREPKT-------DVVFSGLGWVTVNESG-AKIV 352
Query: 601 LWTYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 353 AHVPKGVSVSLRKSLI 368
>gi|148984192|ref|ZP_01817487.1| GTP-binding protein [Streptococcus pneumoniae SP3-BS71]
gi|149006583|ref|ZP_01830282.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|169833423|ref|YP_001695124.1| GTP-binding protein YqeH [Streptococcus pneumoniae Hungary19A-6]
gi|182684693|ref|YP_001836440.1| GTP-binding protein YqeH [Streptococcus pneumoniae CGSP14]
gi|237649161|ref|ZP_04523413.1| GTP-binding protein YqeH [Streptococcus pneumoniae CCRI 1974]
gi|237820723|ref|ZP_04596568.1| GTP-binding protein YqeH [Streptococcus pneumoniae CCRI 1974M2]
gi|387757963|ref|YP_006064942.1| GTP-binding protein [Streptococcus pneumoniae OXC141]
gi|417677481|ref|ZP_12326888.1| GTPase family protein [Streptococcus pneumoniae GA17545]
gi|418113094|ref|ZP_12750094.1| hypothetical protein SPAR72_1797 [Streptococcus pneumoniae GA41538]
gi|418144919|ref|ZP_12781713.1| GTPase family protein [Streptococcus pneumoniae GA13494]
gi|418155739|ref|ZP_12792466.1| GTPase family protein [Streptococcus pneumoniae GA16242]
gi|418226137|ref|ZP_12852765.1| hypothetical protein SPAR141_1670 [Streptococcus pneumoniae NP112]
gi|418232747|ref|ZP_12859333.1| hypothetical protein SPAR13_1657 [Streptococcus pneumoniae GA07228]
gi|418237202|ref|ZP_12863768.1| hypothetical protein SPAR59_1756 [Streptococcus pneumoniae GA19690]
gi|419458338|ref|ZP_13998280.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02254]
gi|419467366|ref|ZP_14007247.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05248]
gi|419495933|ref|ZP_14035650.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47461]
gi|419513145|ref|ZP_14052777.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05578]
gi|419517352|ref|ZP_14056968.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02506]
gi|421234637|ref|ZP_15691255.1| putative GTP-binding protein [Streptococcus pneumoniae 2061617]
gi|421249979|ref|ZP_15706436.1| GTP-binding protein [Streptococcus pneumoniae 2082239]
gi|421283892|ref|ZP_15734678.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04216]
gi|421299211|ref|ZP_15749898.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60080]
gi|421302784|ref|ZP_15753448.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17484]
gi|147761881|gb|EDK68844.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|147923481|gb|EDK74594.1| GTP-binding protein [Streptococcus pneumoniae SP3-BS71]
gi|168995925|gb|ACA36537.1| GTP-binding protein [Streptococcus pneumoniae Hungary19A-6]
gi|182630027|gb|ACB90975.1| GTP-binding protein [Streptococcus pneumoniae CGSP14]
gi|301800552|emb|CBW33192.1| GTP-binding protein [Streptococcus pneumoniae OXC141]
gi|332072922|gb|EGI83403.1| GTPase family protein [Streptococcus pneumoniae GA17545]
gi|353783456|gb|EHD63885.1| hypothetical protein SPAR72_1797 [Streptococcus pneumoniae GA41538]
gi|353805212|gb|EHD85487.1| GTPase family protein [Streptococcus pneumoniae GA13494]
gi|353819988|gb|EHE00177.1| GTPase family protein [Streptococcus pneumoniae GA16242]
gi|353881334|gb|EHE61148.1| hypothetical protein SPAR141_1670 [Streptococcus pneumoniae NP112]
gi|353886060|gb|EHE65844.1| hypothetical protein SPAR13_1657 [Streptococcus pneumoniae GA07228]
gi|353891640|gb|EHE71394.1| hypothetical protein SPAR59_1756 [Streptococcus pneumoniae GA19690]
gi|379530002|gb|EHY95243.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02254]
gi|379543113|gb|EHZ08265.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05248]
gi|379594019|gb|EHZ58830.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47461]
gi|379634310|gb|EHZ98875.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05578]
gi|379639425|gb|EIA03969.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02506]
gi|395600491|gb|EJG60648.1| putative GTP-binding protein [Streptococcus pneumoniae 2061617]
gi|395613673|gb|EJG73701.1| GTP-binding protein [Streptococcus pneumoniae 2082239]
gi|395880578|gb|EJG91630.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04216]
gi|395900682|gb|EJH11620.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60080]
gi|395901406|gb|EJH12342.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17484]
gi|429319928|emb|CCP33247.1| GTP-binding protein [Streptococcus pneumoniae SPN034183]
gi|429321745|emb|CCP35221.1| GTP-binding protein [Streptococcus pneumoniae SPN994039]
gi|429323565|emb|CCP31262.1| GTP-binding protein [Streptococcus pneumoniae SPN994038]
Length = 368
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 186/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|419493875|ref|ZP_14033600.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47210]
gi|421290311|ref|ZP_15741061.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA54354]
gi|421305703|ref|ZP_15756357.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA62331]
gi|379592448|gb|EHZ57264.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47210]
gi|395887996|gb|EJG99010.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA54354]
gi|395904661|gb|EJH15575.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA62331]
Length = 368
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 185/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + H+G L PP +++ +D V N D+ +GL
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEK-------EDFPRLVQHVFTIKNKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + + G A + +W +G+ + R+ ++
Sbjct: 341 GW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|339448445|ref|ZP_08652001.1| GTPase YqeH [Lactobacillus fructivorans KCTC 3543]
Length = 372
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 152/281 (54%), Gaps = 17/281 (6%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKEL 394
++LVG K DLLPS + ++ W+R A G ++ + LVSA+ + V +LL I
Sbjct: 108 IILVGNKSDLLPSSFNHNKVKDWLRQMANKNGIRPID-IELVSAKTNQSVDDLLKAISNH 166
Query: 395 AGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKL 454
R NV+V+G N GKSTLIN ++ + +T + PGTTL +++I L +L
Sbjct: 167 QKGR-NVYVVGVTNVGKSTLINQIIQQSTGEKQVITTSKFPGTTLDLIKIP--LEDGREL 223
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
DTPG++H M+ L + K V +K ++P+TY++ GQ + +G + R D S E
Sbjct: 224 IDTPGVIHEGQMAHYLGSKDLKYVSPQKRIKPKTYQLDPGQTLFLGAIGRFDF--ISGER 281
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSW 574
TV+A N+ +H K+ENADE + H G L PP G+D EL + + KV+ S
Sbjct: 282 HGFTVYADNNLMIHRTKLENADEFFDKHAGELLTPPTGKDNVIELQRY---EFKVTDRS- 337
Query: 575 DVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPL 615
D+ GLGW ++ KG +++ + G+ + +R+ +
Sbjct: 338 -----DLVIEGLGWITVP-KG-STVAGYAPKGVSVLIRKAM 371
>gi|387626936|ref|YP_006063112.1| GTP-binding protein [Streptococcus pneumoniae INV104]
gi|444382383|ref|ZP_21180586.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS8106]
gi|444385619|ref|ZP_21183691.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS8203]
gi|301794722|emb|CBW37173.1| GTP-binding protein [Streptococcus pneumoniae INV104]
gi|444249689|gb|ELU56177.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS8203]
gi|444252657|gb|ELU59119.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS8106]
Length = 368
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 186/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVATRKAII 368
>gi|420206085|ref|ZP_14711595.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM008]
gi|394277924|gb|EJE22241.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM008]
Length = 366
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 174/349 (49%), Gaps = 39/349 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NEV + + DF ++ K G++V VVD DF
Sbjct: 33 EDVICRRCFRLKNY----NEVQDVGMESEDFLNLLTGLSEK------KGIIVNVVDVFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++LV K+DLLP Q++ R+ W+R A+
Sbjct: 83 EGSFINAIQRIVGNK---------------KIILVANKIDLLPKQINHRRVKEWLRKSAR 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G+ LL I + + +V+++G N GKSTLIN ++
Sbjct: 128 KYGL-EAEDVVLISANKGWGIDELLQSINHVRN-KDDVYIVGTTNVGKSTLINKLIEQSV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L K+ ++DTPG++ H M+ ++ +E K++ + E
Sbjct: 186 GEKDVVTTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQMTNYVSENELKIIIPKNE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ Q + GGL R+D + + S ++++H K E A+++WK +
Sbjct: 244 IKQRVYQLNEKQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWKAQL 301
Query: 544 GIRLQPPIGQD-RASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
G L PP QD + L K +L+ T DI +GLG+ ++
Sbjct: 302 GALLSPP--QDAQQFNLNDVKAVRLETGKTKR-----DIMISGLGFITI 343
>gi|309798779|ref|ZP_07693043.1| GTP-binding protein [Streptococcus infantis SK1302]
gi|308117596|gb|EFO55008.1| GTP-binding protein [Streptococcus infantis SK1302]
Length = 368
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 184/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + D DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTDDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKAGKISQWLMERAHEEGLRPVD-VILTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--IAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K+E A + + H+G L PP +++ +D V D+ +GL
Sbjct: 288 LHRTKLEGASDFYDKHLGTLLTPPNTKEK-------EDFPKLVQHVFTIKEKTDLVISGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + G A + +W +G+ + +R+ ++
Sbjct: 341 GWIRVA--GTAKVAVWAPEGVAVVVRKAII 368
>gi|406837396|ref|ZP_11096990.1| GTPase YqeH [Lactobacillus vini DSM 20605]
Length = 371
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 184/369 (49%), Gaps = 40/369 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+ + + DF +V+ +R+ + S +VV V+D D DG
Sbjct: 43 CQRCFRLRHY----NEIEPVSLTNDDFLKVL-SRISQQSA-----LVVNVIDIFDVDG-- 90
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
SL L D +LVG K DLLP + ++ W+R +A G
Sbjct: 91 ------SLLPALHRFIGDNPY-------ILVGNKEDLLPKSLKRAKIKDWLRQQANHFGL 137
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L V L+SA K+ G+ LL I + R +V+ +G N GKSTLIN ++ +
Sbjct: 138 KPL-AVVLLSAEKNRGIDELLEQINKYRQTR-DVYFVGVTNVGKSTLINHLLQQAAGIKN 195
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL +++ L L DTPG++ + + RL E K+++ KEL+P+
Sbjct: 196 LITVSRFPGTTLDFIKLP--LTDGGNLIDTPGIIQSNQIIHRLTTKEMKLIQPIKELKPK 253
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
Y++ GQ + +GGL R+D + S +++ ++ + + +H K ENA+ H+G L
Sbjct: 254 VYQLGAGQTLLLGGLARIDYLKCSKKSM--ILYLAGQLKVHRTKTENAEHFIDRHLGGLL 311
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
QPP ++ AS +++ + V T D+ +GLGW + + A++ W
Sbjct: 312 QPPFKENAAS----FRNLQRHVFKTQQKS---DLVFSGLGWVT--IPAGATVAAWVPKET 362
Query: 608 EITLREPLV 616
+T+R+ ++
Sbjct: 363 GVTIRKAMI 371
>gi|168493658|ref|ZP_02717801.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06]
gi|418074577|ref|ZP_12711828.1| GTPase family protein [Streptococcus pneumoniae GA11184]
gi|418076966|ref|ZP_12714199.1| hypothetical protein SPAR98_1893 [Streptococcus pneumoniae GA47502]
gi|418090106|ref|ZP_12727260.1| hypothetical protein SPAR77_1696 [Streptococcus pneumoniae GA43265]
gi|418099071|ref|ZP_12736168.1| hypothetical protein SPAR122_1653 [Streptococcus pneumoniae
6901-05]
gi|418105855|ref|ZP_12742911.1| hypothetical protein SPAR85_1783 [Streptococcus pneumoniae GA44500]
gi|418115265|ref|ZP_12752251.1| hypothetical protein SPAR125_1666 [Streptococcus pneumoniae
5787-06]
gi|418117423|ref|ZP_12754392.1| hypothetical protein SPAR124_1638 [Streptococcus pneumoniae
6963-05]
gi|418134603|ref|ZP_12771460.1| hypothetical protein SPAR23_0873 [Streptococcus pneumoniae GA11426]
gi|418174140|ref|ZP_12810752.1| GTPase family protein [Streptococcus pneumoniae GA41277]
gi|418217193|ref|ZP_12843873.1| GTPase family protein [Streptococcus pneumoniae Netherlands15B-37]
gi|419432124|ref|ZP_13972257.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP05]
gi|419434026|ref|ZP_13974144.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40183]
gi|419440933|ref|ZP_13980978.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40410]
gi|419465062|ref|ZP_14004953.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04175]
gi|419469549|ref|ZP_14009417.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA06083]
gi|419498116|ref|ZP_14037823.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47522]
gi|419535212|ref|ZP_14074711.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17457]
gi|421281736|ref|ZP_15732533.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04672]
gi|421310151|ref|ZP_15760776.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA62681]
gi|183576456|gb|EDT96984.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06]
gi|353747106|gb|EHD27764.1| hypothetical protein SPAR98_1893 [Streptococcus pneumoniae GA47502]
gi|353747178|gb|EHD27835.1| GTPase family protein [Streptococcus pneumoniae GA11184]
gi|353761297|gb|EHD41869.1| hypothetical protein SPAR77_1696 [Streptococcus pneumoniae GA43265]
gi|353769053|gb|EHD49575.1| hypothetical protein SPAR122_1653 [Streptococcus pneumoniae
6901-05]
gi|353776031|gb|EHD56510.1| hypothetical protein SPAR85_1783 [Streptococcus pneumoniae GA44500]
gi|353785349|gb|EHD65768.1| hypothetical protein SPAR125_1666 [Streptococcus pneumoniae
5787-06]
gi|353788104|gb|EHD68502.1| hypothetical protein SPAR124_1638 [Streptococcus pneumoniae
6963-05]
gi|353838096|gb|EHE18177.1| GTPase family protein [Streptococcus pneumoniae GA41277]
gi|353870466|gb|EHE50339.1| GTPase family protein [Streptococcus pneumoniae Netherlands15B-37]
gi|353901840|gb|EHE77370.1| hypothetical protein SPAR23_0873 [Streptococcus pneumoniae GA11426]
gi|379536662|gb|EHZ01848.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04175]
gi|379544353|gb|EHZ09498.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA06083]
gi|379563373|gb|EHZ28377.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17457]
gi|379577027|gb|EHZ41951.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40183]
gi|379578003|gb|EHZ42920.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40410]
gi|379598949|gb|EHZ63734.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47522]
gi|379629205|gb|EHZ93806.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP05]
gi|395881001|gb|EJG92052.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA04672]
gi|395909766|gb|EJH20641.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA62681]
Length = 368
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 186/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAYEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|224139766|ref|XP_002323266.1| predicted protein [Populus trichocarpa]
gi|222867896|gb|EEF05027.1| predicted protein [Populus trichocarpa]
Length = 176
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/240 (40%), Positives = 123/240 (51%), Gaps = 69/240 (28%)
Query: 303 FDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA 362
DG+ + + + LE KDD + S+KLPKLVLVG+K
Sbjct: 1 MDGIPLLFLIRVVVQGLEGVKDDPRASRKLPKLVLVGSK--------------------- 39
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE 422
D+GVRNL +FI+E+AGPRGNVWVI AQNAG+STLIN KK
Sbjct: 40 ------------------DVGVRNLSSFIEEVAGPRGNVWVIRAQNAGESTLINAL-KKG 80
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
G +V+KLTEA +PGTTLGI + +Y ++ P +
Sbjct: 81 GARVTKLTEASVPGTTLGI----------SAVYVEDPVIVPRALF--------------- 115
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E T ++ GQAV V + SV+TIYV VWASPN SLH G+IENADE WKNH
Sbjct: 116 EFLRATDLLQEGQAVLVAARPQ----STSVQTIYVIVWASPNFSLHTGEIENADEFWKNH 171
>gi|228475982|ref|ZP_04060690.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis SK119]
gi|314936283|ref|ZP_07843630.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis subsp.
hominis C80]
gi|418619924|ref|ZP_13182735.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis VCU122]
gi|228269805|gb|EEK11285.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis SK119]
gi|313654902|gb|EFS18647.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis subsp.
hominis C80]
gi|374823487|gb|EHR87482.1| ribosome biogenesis GTPase YqeH [Staphylococcus hominis VCU122]
Length = 366
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 181/378 (47%), Gaps = 53/378 (14%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
+C RC L+NY NE+ + + DF ++ + G++V V+D DF+G
Sbjct: 35 VICQRCFRLKNY----NEIQDVGMDSEDFLNLLN------GLSDRQGIIVNVIDVFDFEG 84
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 85 SFINALKRIVGNK---------------KIILAANKLDLLPRQINQRRVKEWLKRTARKY 129
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G + V L+SA K G+ LL I + +V+++G N GKSTLIN ++ +
Sbjct: 130 GL-EAEEVVLISAHKGWGIDALLESINRFRNHQ-DVYIVGTTNVGKSTLINKLIEQSVGE 187
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
+T + PGTTL ++ I L +YDTPG++ H M+ + E K++ R E++
Sbjct: 188 KDVVTTSRFPGTTLDMIDIP--LDENTFMYDTPGIIQAHQMTHYVTEKELKVIIPRNEIK 245
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
R +++ GQ + GGL R+D + + S ++++H K E A+++W+N +G
Sbjct: 246 QRVFQLNEGQTLFFGGLARIDYVSGGKRPL--VCYFSNDLNIHRTKTEKANDLWRNQIGH 303
Query: 546 RLQPP-------IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEAS 598
L PP I +A L T K+++ DI +GLG+ + L+ A
Sbjct: 304 LLSPPSNPEKFNISDMKAVRLETGKEKR-------------DIMISGLGFIT--LEAGAK 348
Query: 599 LTLWTYDGIEITLREPLV 616
+ + +++ LR+ ++
Sbjct: 349 VIVRVPKSVDVVLRQSIM 366
>gi|418412008|ref|ZP_12985274.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
BVS058A4]
gi|410891591|gb|EKS39388.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
BVS058A4]
Length = 366
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 174/348 (50%), Gaps = 37/348 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NEV + + DF ++ K G++V VVD DF
Sbjct: 33 EDVICRRCFRLKNY----NEVQDVGMESEDFLNLLTGLSEK------KGIIVNVVDVFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++LV K+DLLP Q++ R+ W+R A+
Sbjct: 83 EGSFINAIQRIVGNK---------------KIILVANKMDLLPKQINHRRVKEWLRKSAR 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G+ LL I + + +V+++G N GKSTLIN ++
Sbjct: 128 KYGL-EAEDVVLISANKGWGIDELLQSINHVRN-KDDVYIVGTTNVGKSTLINKLIEQSV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L K+ ++DTPG++ H M+ ++ +E K++ + E
Sbjct: 186 GEKDVVTTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQMTNYVSENELKIIIPKNE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ Q + GGL R+D + + S ++++H K E A+++WK+ +
Sbjct: 244 IKQRVYQLNEKQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWKSQL 301
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
G L PP + + L K +L+ T DI +GLG+ ++
Sbjct: 302 GALLSPP-QEAQQFNLNDVKAVRLETGKTKR-----DIMISGLGFITI 343
>gi|418165043|ref|ZP_12801711.1| GTPase family protein [Streptococcus pneumoniae GA17371]
gi|353828875|gb|EHE09011.1| GTPase family protein [Streptococcus pneumoniae GA17371]
Length = 336
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 184/388 (47%), Gaps = 65/388 (16%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GEV C RC LR+Y NE+ + + + DF +L+ G+++A +VV V+D
Sbjct: 2 ETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSDA-LVVNVIDI 50
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLPSQVSPTRL 354
DF+G + LP+ V LVG K D+LP V ++
Sbjct: 51 FDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILPKSVKSGKI 89
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
+W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G N GKSTL
Sbjct: 90 SQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTL 147
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN ++ + +T + PGTTL + I L + +YDTPG++H H M+ L
Sbjct: 148 INAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAHYLTAKN 205
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
K V +KE++P+TY++ Q + +GGL R D + T + + LH K+E
Sbjct: 206 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRSKLEG 263
Query: 535 ADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
A + H+G L PP +++ + T KD+ D+ +GLGW
Sbjct: 264 ASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------DLVISGLGW 310
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ + G A + +W +G+ + +R+ ++
Sbjct: 311 --IRVTGIAKVAVWAPEGVAVVIRKAII 336
>gi|309807137|ref|ZP_07701114.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LactinV
03V1-b]
gi|308166488|gb|EFO68690.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LactinV
03V1-b]
Length = 370
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 190/412 (46%), Gaps = 53/412 (12%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G+I ++ K KLS + +E C RC LR+Y ++ V EN
Sbjct: 9 IGCGSILQD-----KDSKLSGYMPHSAFNKMIQEPDTSVYCQRCFRLRHYNEI-TPVNEN 62
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ DF RL+ GN A ++V VVD DF+ SL L+ D +
Sbjct: 63 ---NDDF-----LRLLNSLGNKKA-LIVNVVDLFDFNN--------SLITSLDRFIGDNE 105
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA-PKLNGVYLVSARKDLGVRN 386
VLVG KVDL P +++ W+R A G PK ++L+SA K RN
Sbjct: 106 F-------VLVGNKVDLFPKNSKESKIKDWMRQEANRNGLFPK--KIFLLSAIKK---RN 153
Query: 387 LLAFIKELA--GPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRI 444
+ I LA G +++ +G N GKSTLIN + + +T + PGTTL ++I
Sbjct: 154 IDELINYLATKGKNEDIYFVGTTNVGKSTLINAIIETRSEYKNLITTSKFPGTTLDSIKI 213
Query: 445 GGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMR 504
L L DTPG+L M+ RL E ++V +K+L+P TY++ GQ + + GL R
Sbjct: 214 P--LNEGHYLVDTPGILSKKQMASRLTGSELELVAPKKQLKPATYQLLPGQTIFLAGLGR 271
Query: 505 LDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKD 564
+D + T++ + ++ LH K NADE + H L PP D +LG K
Sbjct: 272 IDFIKGPASGF--TIYVARDLYLHRTKTINADEFYLKHKSDLLNPPCDSD---DLGALKG 326
Query: 565 RKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ S S DI G+G+ + + + +T +GI + +R L+
Sbjct: 327 QIYSTSEKS------DILFGGVGFIT--VTSGVVIKAYTPEGIGLGIRRALI 370
>gi|421207182|ref|ZP_15664234.1| hypothetical protein AMCSP20_001750 [Streptococcus pneumoniae
2090008]
gi|421230360|ref|ZP_15687024.1| putative GTP-binding protein [Streptococcus pneumoniae 2061376]
gi|421292619|ref|ZP_15743353.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA56348]
gi|421312558|ref|ZP_15763160.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58981]
gi|395574518|gb|EJG35096.1| hypothetical protein AMCSP20_001750 [Streptococcus pneumoniae
2090008]
gi|395593886|gb|EJG54128.1| putative GTP-binding protein [Streptococcus pneumoniae 2061376]
gi|395891926|gb|EJH02920.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA56348]
gi|395909412|gb|EJH20288.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58981]
Length = 368
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 186/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPSLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|168486390|ref|ZP_02710898.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00]
gi|418185507|ref|ZP_12822047.1| GTPase family protein [Streptococcus pneumoniae GA47283]
gi|419511011|ref|ZP_14050652.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae NP141]
gi|419530906|ref|ZP_14070432.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40028]
gi|421215847|ref|ZP_15672768.1| hypothetical protein AMCSP04_001566 [Streptococcus pneumoniae
2070109]
gi|183570601|gb|EDT91129.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00]
gi|353848237|gb|EHE28253.1| GTPase family protein [Streptococcus pneumoniae GA47283]
gi|379571315|gb|EHZ36273.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40028]
gi|379631614|gb|EHZ96191.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae NP141]
gi|395580054|gb|EJG40549.1| hypothetical protein AMCSP04_001566 [Streptococcus pneumoniae
2070109]
Length = 368
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 186/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEYYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|259500527|ref|ZP_05743429.1| GTP-binding protein [Lactobacillus iners DSM 13335]
gi|302191217|ref|ZP_07267471.1| GTP-binding protein YqeH [Lactobacillus iners AB-1]
gi|325912153|ref|ZP_08174551.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 143-D]
gi|259167911|gb|EEW52406.1| GTP-binding protein [Lactobacillus iners DSM 13335]
gi|325476103|gb|EGC79271.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 143-D]
Length = 370
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 190/412 (46%), Gaps = 53/412 (12%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G+I ++ K KLS + +E C RC LR+Y ++ V EN
Sbjct: 9 IGCGSILQD-----KDSKLSGYMPHSAFNKMIQEPDTSVYCQRCFRLRHYNEI-TPVNEN 62
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ DF RL+ GN A ++V VVD DF+ SL L+ D +
Sbjct: 63 ---NDDF-----LRLLNSLGNKKA-LIVNVVDLFDFNN--------SLITSLDRFIGDNE 105
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA-PKLNGVYLVSARKDLGVRN 386
VLVG KVDL P +++ W+R A G PK ++L+SA K RN
Sbjct: 106 F-------VLVGNKVDLFPKNSKESKIKDWMRQEANRNGLFPK--KIFLLSAIKK---RN 153
Query: 387 LLAFIKELA--GPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRI 444
+ I LA G +++ +G N GKSTLIN + + +T + PGTTL ++I
Sbjct: 154 IDELINYLATKGKNEDIYFVGTTNVGKSTLINAIIETRSEYKNLITTSKFPGTTLDSIKI 213
Query: 445 GGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMR 504
L L DTPG+L M+ RL E ++V +K+L+P TY++ GQ + + GL R
Sbjct: 214 P--LNEGHYLVDTPGILSKKQMASRLTGSELELVAPKKQLKPATYQLLPGQTIFLAGLGR 271
Query: 505 LDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKD 564
+D + T++ + ++ LH K NADE + H L PP D +LG K
Sbjct: 272 IDFIKGPASGF--TIYVARDLYLHRTKTINADEFYLKHKSDLLNPPCDND---DLGALKG 326
Query: 565 RKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ S S DI G+G+ + + + +T +GI + +R L+
Sbjct: 327 QLYSTSEKS------DILFGGVGFIT--VPSGVVIKAYTPEGIGLGIRRALI 370
>gi|225867895|ref|YP_002743843.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus]
gi|225701171|emb|CAW98072.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus]
Length = 372
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 180/371 (48%), Gaps = 40/371 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y N++ + I D +F RL+ G+++A +VV V+D DF+G
Sbjct: 40 CQRCFRLRHY----NDITDVHITDEEF-----LRLLHEVGDSDA-LVVNVIDIFDFNGSV 89
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
++ + A +D ++LVG K D+LP V +++ +W+ RA G
Sbjct: 90 IPGLSRFV------AGND---------VLLVGNKKDILPKSVKDSKVTQWLTERAHEEGL 134
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ V L SA+ ++ L+ I +L R +V+V+G N GKSTLIN ++
Sbjct: 135 RPLD-VLLTSAQNKYAIKELIERIDQLRQGR-DVYVVGVTNVGKSTLINAIIQEITGDKD 192
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL + I L + ++DTPG++H H M+ L+ K + +KE++P+
Sbjct: 193 VITTSRFPGTTLDKIEIP--LDDGSFIFDTPGIIHRHQMAHYLSAKNLKFISPKKEIKPK 250
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ Q + +GGL R D S E T + + LH K+E AD + G L
Sbjct: 251 TYQLNPEQTLFLGGLARFDF--ISGERQGFTAYFDNQLLLHRTKLEGADAFYDKQAGQLL 308
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEAS--LTLWTYD 605
PP ++ D V +DI +GLGW + E + + W D
Sbjct: 309 TPPDKKE-------LDDFPRLVRHEFLLDQKVDIVFSGLGWIRVNANKETATKVAAWAPD 361
Query: 606 GIEITLREPLV 616
G+ + +R+ ++
Sbjct: 362 GVAVVVRKAII 372
>gi|417091550|ref|ZP_11956427.1| GTP-binding protein YqeH [Streptococcus suis R61]
gi|353533158|gb|EHC02825.1| GTP-binding protein YqeH [Streptococcus suis R61]
Length = 368
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 186/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E G++ C RC LR+Y NE+++ I D DF +L+ G ++A
Sbjct: 26 QSALEKGLETGQL-YCQRCFRLRHY----NEISDVNISDDDF-----LKLLHSVGESDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ + LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFISGNDVLLVGNKQDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G
Sbjct: 114 KSVKTGKVTQWLTERAHEIGMRPVD-VVLTSAQNKQAIKDLIEKIEQYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K + RKE++P+TY++ Q + + GL R D + E T + +
Sbjct: 230 AHYLTAKNLKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDF--VAGERQGFTAFFDNELQ 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K++ A E ++ H G L PP ++ E + ++ + D+ +GL
Sbjct: 288 LHRTKLQGASEFYQKHAGSLLVPPTSKE-LKEFPELVRHEFTINEKT------DVVFSGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + K A + W G+++ +R+ ++
Sbjct: 341 GWIRVNEK--AKIAAWAPKGVDVVIRKAII 368
>gi|149002055|ref|ZP_01827009.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS69]
gi|147759864|gb|EDK66854.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS69]
Length = 336
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 183/388 (47%), Gaps = 65/388 (16%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GEV C RC LR+Y NE+ + + + DF +L+ G+++A +VV V+D
Sbjct: 2 ETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSDA-LVVNVIDI 50
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLPSQVSPTRL 354
DF+G + LP+ V LVG K D+LP V ++
Sbjct: 51 FDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILPKSVKSGKI 89
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
+W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G N GKSTL
Sbjct: 90 SQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTL 147
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN ++ + +T + PGTTL + I L + +YDTPG++H H M+ L
Sbjct: 148 INAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAHYLTAKN 205
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
K V +KE++P+TY++ Q + +GGL R D + T + + LH K+E
Sbjct: 206 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRSKLEG 263
Query: 535 ADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
A + H+G L PP +++ + T KD+ D+ +GLGW
Sbjct: 264 ASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------DLVISGLGW 310
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ + G A + +W +G+ + R+ ++
Sbjct: 311 --IRVTGTAKVAVWAPEGVAVVTRKAII 336
>gi|15901581|ref|NP_346185.1| GTP-binding protein YqeH [Streptococcus pneumoniae TIGR4]
gi|111657472|ref|ZP_01408219.1| hypothetical protein SpneT_02001323 [Streptococcus pneumoniae
TIGR4]
gi|149011381|ref|ZP_01832628.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75]
gi|149020832|ref|ZP_01835361.1| GTP-binding protein [Streptococcus pneumoniae SP23-BS72]
gi|168483288|ref|ZP_02708240.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00]
gi|168488531|ref|ZP_02712730.1| GTP-binding protein [Streptococcus pneumoniae SP195]
gi|168491368|ref|ZP_02715511.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04]
gi|194396922|ref|YP_002038359.1| GTP-binding protein YqeH [Streptococcus pneumoniae G54]
gi|303254361|ref|ZP_07340469.1| GTP-binding protein YqeH [Streptococcus pneumoniae BS455]
gi|303258686|ref|ZP_07344666.1| GTP-binding protein [Streptococcus pneumoniae SP-BS293]
gi|303261849|ref|ZP_07347795.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS292]
gi|303263712|ref|ZP_07349634.1| GTP-binding protein [Streptococcus pneumoniae BS397]
gi|303266652|ref|ZP_07352536.1| GTP-binding protein [Streptococcus pneumoniae BS457]
gi|303268542|ref|ZP_07354335.1| GTP-binding protein [Streptococcus pneumoniae BS458]
gi|307127963|ref|YP_003879994.1| GTP-binding protein [Streptococcus pneumoniae 670-6B]
gi|387759860|ref|YP_006066838.1| GTP-binding protein [Streptococcus pneumoniae INV200]
gi|410477116|ref|YP_006743875.1| GTP-binding protein [Streptococcus pneumoniae gamPNI0373]
gi|417679716|ref|ZP_12329112.1| GTPase family protein [Streptococcus pneumoniae GA17570]
gi|417687199|ref|ZP_12336473.1| GTPase family protein [Streptococcus pneumoniae GA41301]
gi|418087420|ref|ZP_12724589.1| hypothetical protein SPAR87_1205 [Streptococcus pneumoniae GA47033]
gi|418103440|ref|ZP_12740512.1| hypothetical protein SPAR143_1719 [Streptococcus pneumoniae NP070]
gi|418121805|ref|ZP_12758748.1| hypothetical protein SPAR80_1676 [Streptococcus pneumoniae GA44194]
gi|418130897|ref|ZP_12767780.1| hypothetical protein SPAR14_1696 [Streptococcus pneumoniae GA07643]
gi|418133209|ref|ZP_12770079.1| hypothetical protein SPAR22_1792 [Streptococcus pneumoniae GA11304]
gi|418140074|ref|ZP_12776899.1| hypothetical protein SPAR28_1713 [Streptococcus pneumoniae GA13338]
gi|418162793|ref|ZP_12799474.1| GTPase family protein [Streptococcus pneumoniae GA17328]
gi|418176539|ref|ZP_12813130.1| GTPase family protein [Streptococcus pneumoniae GA41437]
gi|418181104|ref|ZP_12817673.1| GTPase family protein [Streptococcus pneumoniae GA41688]
gi|418187727|ref|ZP_12824250.1| hypothetical protein SPAR92_1701 [Streptococcus pneumoniae GA47360]
gi|418189987|ref|ZP_12826499.1| hypothetical protein SPAR94_1751 [Streptococcus pneumoniae GA47373]
gi|418192189|ref|ZP_12828691.1| hypothetical protein SPAR96_1722 [Streptococcus pneumoniae GA47388]
gi|418194316|ref|ZP_12830805.1| hypothetical protein SPAR119_1602 [Streptococcus pneumoniae
GA47439]
gi|418202958|ref|ZP_12839387.1| GTPase family protein [Streptococcus pneumoniae GA52306]
gi|418214947|ref|ZP_12841681.1| hypothetical protein SPAR118_1750 [Streptococcus pneumoniae
GA54644]
gi|418219476|ref|ZP_12846141.1| hypothetical protein SPAR145_1764 [Streptococcus pneumoniae NP127]
gi|418230522|ref|ZP_12857121.1| hypothetical protein SPAR136_1771 [Streptococcus pneumoniae
EU-NP01]
gi|418234949|ref|ZP_12861525.1| hypothetical protein SPAR17_1732 [Streptococcus pneumoniae GA08780]
gi|418239274|ref|ZP_12865825.1| hypothetical protein SPAR146_1731 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419456099|ref|ZP_13996056.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP04]
gi|419462910|ref|ZP_14002813.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02714]
gi|419476080|ref|ZP_14015916.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA14688]
gi|419478389|ref|ZP_14018212.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA18068]
gi|419482786|ref|ZP_14022573.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40563]
gi|419484978|ref|ZP_14024753.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA43257]
gi|419487226|ref|ZP_14026988.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA44128]
gi|419491647|ref|ZP_14031385.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47179]
gi|419508845|ref|ZP_14048496.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA49542]
gi|419515255|ref|ZP_14054880.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae
England14-9]
gi|419521681|ref|ZP_14061276.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05245]
gi|419526463|ref|ZP_14066021.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA14373]
gi|419532946|ref|ZP_14072461.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47794]
gi|421209516|ref|ZP_15666529.1| hypothetical protein AMCSP11_001704 [Streptococcus pneumoniae
2070005]
gi|421225586|ref|ZP_15682324.1| hypothetical protein AMCSP06_001724 [Streptococcus pneumoniae
2070768]
gi|421227944|ref|ZP_15684646.1| hypothetical protein AMCSP08_001763 [Streptococcus pneumoniae
2072047]
gi|421236837|ref|ZP_15693434.1| GTP-binding protein [Streptococcus pneumoniae 2071004]
gi|421241211|ref|ZP_15697756.1| GTP-binding protein [Streptococcus pneumoniae 2080913]
gi|421243681|ref|ZP_15700193.1| GTP-binding protein [Streptococcus pneumoniae 2081074]
gi|421248020|ref|ZP_15704498.1| GTP-binding protein [Streptococcus pneumoniae 2082170]
gi|421271160|ref|ZP_15722014.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR48]
gi|421275460|ref|ZP_15726289.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA52612]
gi|421279526|ref|ZP_15730332.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17301]
gi|421285894|ref|ZP_15736670.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60190]
gi|421294883|ref|ZP_15745604.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA56113]
gi|421296582|ref|ZP_15747291.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58581]
gi|421301603|ref|ZP_15752273.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19998]
gi|444387594|ref|ZP_21185613.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae
PCS125219]
gi|444389152|ref|ZP_21187069.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS70012]
gi|444392013|ref|ZP_21189773.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS81218]
gi|444394829|ref|ZP_21192379.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0002]
gi|444398200|ref|ZP_21195683.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0006]
gi|444399303|ref|ZP_21196771.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0007]
gi|444402501|ref|ZP_21199664.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0008]
gi|444405544|ref|ZP_21202419.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0009]
gi|444407818|ref|ZP_21204485.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0010]
gi|444415694|ref|ZP_21211923.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0199]
gi|444417246|ref|ZP_21213299.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0360]
gi|444419622|ref|ZP_21215470.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0427]
gi|14973245|gb|AAK75825.1| GTP-binding protein [Streptococcus pneumoniae TIGR4]
gi|147764371|gb|EDK71302.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75]
gi|147930473|gb|EDK81456.1| GTP-binding protein [Streptococcus pneumoniae SP23-BS72]
gi|172043326|gb|EDT51372.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00]
gi|183572678|gb|EDT93206.1| GTP-binding protein [Streptococcus pneumoniae SP195]
gi|183574264|gb|EDT94792.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04]
gi|194356589|gb|ACF55037.1| GTP-binding protein [Streptococcus pneumoniae G54]
gi|301802449|emb|CBW35205.1| GTP-binding protein [Streptococcus pneumoniae INV200]
gi|302598712|gb|EFL65750.1| GTP-binding protein YqeH [Streptococcus pneumoniae BS455]
gi|302636932|gb|EFL67421.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS292]
gi|302640187|gb|EFL70642.1| GTP-binding protein [Streptococcus pneumoniae SP-BS293]
gi|302641937|gb|EFL72291.1| GTP-binding protein [Streptococcus pneumoniae BS458]
gi|302643814|gb|EFL74077.1| GTP-binding protein [Streptococcus pneumoniae BS457]
gi|302646750|gb|EFL76975.1| GTP-binding protein [Streptococcus pneumoniae BS397]
gi|306485025|gb|ADM91894.1| GTP-binding protein [Streptococcus pneumoniae 670-6B]
gi|332072581|gb|EGI83064.1| GTPase family protein [Streptococcus pneumoniae GA17570]
gi|332074089|gb|EGI84567.1| GTPase family protein [Streptococcus pneumoniae GA41301]
gi|353758436|gb|EHD39028.1| hypothetical protein SPAR87_1205 [Streptococcus pneumoniae GA47033]
gi|353774741|gb|EHD55228.1| hypothetical protein SPAR143_1719 [Streptococcus pneumoniae NP070]
gi|353792641|gb|EHD73013.1| hypothetical protein SPAR80_1676 [Streptococcus pneumoniae GA44194]
gi|353802221|gb|EHD82521.1| hypothetical protein SPAR14_1696 [Streptococcus pneumoniae GA07643]
gi|353804651|gb|EHD84931.1| hypothetical protein SPAR22_1792 [Streptococcus pneumoniae GA11304]
gi|353826855|gb|EHE07012.1| GTPase family protein [Streptococcus pneumoniae GA17328]
gi|353840610|gb|EHE20674.1| GTPase family protein [Streptococcus pneumoniae GA41437]
gi|353843176|gb|EHE23221.1| GTPase family protein [Streptococcus pneumoniae GA41688]
gi|353849712|gb|EHE29717.1| hypothetical protein SPAR92_1701 [Streptococcus pneumoniae GA47360]
gi|353853714|gb|EHE33695.1| hypothetical protein SPAR94_1751 [Streptococcus pneumoniae GA47373]
gi|353855275|gb|EHE35245.1| hypothetical protein SPAR96_1722 [Streptococcus pneumoniae GA47388]
gi|353857894|gb|EHE37856.1| hypothetical protein SPAR119_1602 [Streptococcus pneumoniae
GA47439]
gi|353867515|gb|EHE47410.1| GTPase family protein [Streptococcus pneumoniae GA52306]
gi|353869677|gb|EHE49558.1| hypothetical protein SPAR118_1750 [Streptococcus pneumoniae
GA54644]
gi|353873836|gb|EHE53695.1| hypothetical protein SPAR145_1764 [Streptococcus pneumoniae NP127]
gi|353885403|gb|EHE65192.1| hypothetical protein SPAR136_1771 [Streptococcus pneumoniae
EU-NP01]
gi|353886571|gb|EHE66353.1| hypothetical protein SPAR17_1732 [Streptococcus pneumoniae GA08780]
gi|353892265|gb|EHE72014.1| hypothetical protein SPAR146_1731 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353904853|gb|EHE80303.1| hypothetical protein SPAR28_1713 [Streptococcus pneumoniae GA13338]
gi|379530342|gb|EHY95582.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA02714]
gi|379538981|gb|EHZ04161.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA05245]
gi|379557103|gb|EHZ22150.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA14373]
gi|379558862|gb|EHZ23894.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA14688]
gi|379564901|gb|EHZ29896.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA18068]
gi|379579378|gb|EHZ44285.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA40563]
gi|379581731|gb|EHZ46615.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA43257]
gi|379585595|gb|EHZ50451.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA44128]
gi|379593009|gb|EHZ57824.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47179]
gi|379605466|gb|EHZ70217.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47794]
gi|379610799|gb|EHZ75529.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA49542]
gi|379628075|gb|EHZ92681.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae EU-NP04]
gi|379635804|gb|EIA00363.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae
England14-9]
gi|395573612|gb|EJG34202.1| hypothetical protein AMCSP11_001704 [Streptococcus pneumoniae
2070005]
gi|395589073|gb|EJG49395.1| hypothetical protein AMCSP06_001724 [Streptococcus pneumoniae
2070768]
gi|395594228|gb|EJG54468.1| hypothetical protein AMCSP08_001763 [Streptococcus pneumoniae
2072047]
gi|395601600|gb|EJG61747.1| GTP-binding protein [Streptococcus pneumoniae 2071004]
gi|395606330|gb|EJG66437.1| GTP-binding protein [Streptococcus pneumoniae 2081074]
gi|395607589|gb|EJG67686.1| GTP-binding protein [Streptococcus pneumoniae 2080913]
gi|395612894|gb|EJG72928.1| GTP-binding protein [Streptococcus pneumoniae 2082170]
gi|395867374|gb|EJG78498.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae SPAR48]
gi|395873424|gb|EJG84516.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA52612]
gi|395879019|gb|EJG90081.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA17301]
gi|395885881|gb|EJG96902.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA60190]
gi|395893452|gb|EJH04439.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA56113]
gi|395895455|gb|EJH06430.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA58581]
gi|395899163|gb|EJH10107.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19998]
gi|406370061|gb|AFS43751.1| GTP-binding protein [Streptococcus pneumoniae gamPNI0373]
gi|444252472|gb|ELU58935.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae
PCS125219]
gi|444257752|gb|ELU64085.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS70012]
gi|444259447|gb|ELU65761.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0002]
gi|444260857|gb|ELU67165.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0006]
gi|444264172|gb|ELU70277.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PCS81218]
gi|444266357|gb|ELU72314.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0008]
gi|444268869|gb|ELU74693.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0007]
gi|444271414|gb|ELU77165.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0010]
gi|444273115|gb|ELU78796.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0009]
gi|444279221|gb|ELU84627.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0199]
gi|444284412|gb|ELU89560.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0360]
gi|444286444|gb|ELU91426.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0427]
Length = 368
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 186/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|315658127|ref|ZP_07910999.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis M23590]
gi|315496456|gb|EFU84779.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis M23590]
Length = 366
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 181/380 (47%), Gaps = 53/380 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY +V+ D D L+ + +G++V VVD DF
Sbjct: 33 EDVICRRCFRLKNYNEVQ---------DVGMDSEDFLNLLNGLSD-RSGIIVNVVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++LV K+DLLP Q++ R+ W++ AK
Sbjct: 83 EGSFINALKRIVGNK---------------KIILVANKLDLLPKQINHRRVKEWLKRSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G+ +LL I + +V+++G N GKSTLIN +
Sbjct: 128 KYGL-EAEEVVLISAEKGWGIEDLLTAINQ-NRDHDDVYIVGTTNVGKSTLINKLIELSV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L + +YDTPG++ H M+ + E K + +KE
Sbjct: 186 GEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQEHQMTHLVTEKELKTIIPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ Q + +GGL R+D + + S ++++H K E A+E+WKN +
Sbjct: 244 IKQRVYQLNESQTLFLGGLARIDYVSGGKRPL--ICFFSNDLNIHRTKTEKANELWKNQL 301
Query: 544 GIRLQPP-------IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
G L PP + +A L T K+++ DI +GLG+ + +
Sbjct: 302 GDLLTPPNNVSNFNLKDIKAVRLETGKEKR-------------DIMISGLGFIT--IDSG 346
Query: 597 ASLTLWTYDGIEITLREPLV 616
A + + +++ LR ++
Sbjct: 347 AKVIVRVPKNVDVVLRNSIL 366
>gi|419480588|ref|ZP_14020392.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19101]
gi|419500293|ref|ZP_14039987.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47597]
gi|379569757|gb|EHZ34724.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA19101]
gi|379599601|gb|EHZ64384.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47597]
gi|429316588|emb|CCP36296.1| GTP-binding protein [Streptococcus pneumoniae SPN034156]
Length = 368
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 185/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF + + G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKFLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 368
>gi|402815729|ref|ZP_10865321.1| ribosome biogenesis GTPase YqeH [Paenibacillus alvei DSM 29]
gi|402506769|gb|EJW17292.1| ribosome biogenesis GTPase YqeH [Paenibacillus alvei DSM 29]
Length = 372
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 182/371 (49%), Gaps = 36/371 (9%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
+C RC ++NY E + FD D + RL+ G +A +V+ +VD DFDG
Sbjct: 38 VICQRCFRIKNYN-------EAISVAFDQDEFL--RLLGRIGEEDA-LVIHIVDLFDFDG 87
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
S+ L+ + P L++V K+DLLP + R+ WV+ +AK
Sbjct: 88 --------SIISGLQ------RFVGNNPVLLVV-NKIDLLPKVTNWNRMINWVQRQAKEH 132
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G ++ + LVSA+++LG L+ + + G R +V+V+GA N GKSTLIN +
Sbjct: 133 GI-RIVDIALVSAKRNLGFDRLIEQVADWRGDR-DVYVVGATNVGKSTLINRLIRDYSDL 190
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
+LT + PGTTL ++ I L + DTPG+++ ++ +R++ + K L+
Sbjct: 191 DGELTTSRYPGTTLDMIHIP--LDDGKHIIDTPGIVYKSRLTELASREDLSALLPDKSLK 248
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P Y++ GQ + G R D + ++ T + S ++ +H K+E ADE++++H G
Sbjct: 249 PAVYQLNEGQTLFFGAFARFDFVEGERQSF--TCYLSNDLPIHRTKLERADELYRDHRGE 306
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
L PP ++R EL W + ++ D+ +GLGW A + +
Sbjct: 307 LLAPPT-RERIDELPAWTKHQFRIGRGG----ATDVFISGLGWIKCNGTTGALVEVHAPK 361
Query: 606 GIEITLREPLV 616
G+++ R L+
Sbjct: 362 GVKVLARHSLI 372
>gi|309810198|ref|ZP_07704043.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN
2503V10-D]
gi|312872993|ref|ZP_07733053.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2062A-h1]
gi|312874210|ref|ZP_07734244.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2052A-d]
gi|312875587|ref|ZP_07735588.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2053A-b]
gi|325912587|ref|ZP_08174970.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 60-B]
gi|308169470|gb|EFO71518.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN
2503V10-D]
gi|311088841|gb|EFQ47284.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2053A-b]
gi|311090280|gb|EFQ48690.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2052A-d]
gi|311091515|gb|EFQ49899.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2062A-h1]
gi|325478008|gb|EGC81137.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 60-B]
Length = 370
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 190/412 (46%), Gaps = 53/412 (12%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G+I ++ K KLS + +E C RC LR+Y ++ V EN
Sbjct: 9 IGCGSILQD-----KDSKLSGYMPHSAFNKMIQEPDTSVYCQRCFRLRHYNEI-TPVNEN 62
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ DF RL+ GN A ++V VVD DF+ SL L+ D +
Sbjct: 63 ---NDDF-----LRLLNSLGNKKA-LIVNVVDLFDFNN--------SLITSLDRFIGDNE 105
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA-PKLNGVYLVSARKDLGVRN 386
VLVG KVDL P +++ W+R A G PK ++L+SA K RN
Sbjct: 106 F-------VLVGNKVDLFPKNSKESKIKDWMRQEANRNGLFPK--KIFLLSAIKK---RN 153
Query: 387 LLAFIKELA--GPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRI 444
+ I LA G +++ +G N GKSTLIN + + +T + PGTTL ++I
Sbjct: 154 IDELINYLATKGKNEDIYFVGTTNVGKSTLINAIIETRSEYKNLITTSKFPGTTLDSIKI 213
Query: 445 GGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMR 504
L L DTPG+L M+ RL E ++V +K+L+P TY++ GQ + + GL R
Sbjct: 214 P--LNEGHYLVDTPGILSKKQMASRLTGSELELVAPKKQLKPATYQLLPGQTIFLAGLGR 271
Query: 505 LDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKD 564
+D + T++ + ++ LH K NADE + H L PP D +LG K
Sbjct: 272 IDFIKGPASGF--TIYVARDLYLHRTKTINADEFYLKHKSDLLNPPCDSD---DLGALKG 326
Query: 565 RKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ S S DI G+G+ + + + +T +GI + +R L+
Sbjct: 327 QIYSTSEKS------DILFGGVGFIT--VPSGVVIKAYTPEGIGLGIRRALI 370
>gi|386585533|ref|YP_006081935.1| GTP-binding protein YqeH [Streptococcus suis D12]
gi|353737679|gb|AER18687.1| GTP-binding protein YqeH [Streptococcus suis D12]
Length = 368
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 186/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E G++ C RC LR+Y NE+++ I D DF +L+ G ++A
Sbjct: 26 QSALEKGLETGQL-YCQRCFRLRHY----NEISDVNISDDDF-----LKLLHSVGESDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ + LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFISGNDVLLVGNKQDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G
Sbjct: 114 KSVKTGKVTQWLTERAHEIGMRPVD-VVLTSAQNKQAIKDLIEKIEQHRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K + RKE++P+TY++ Q + + GL R D + E T + +
Sbjct: 230 AHYLTAKNLKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDF--VAGERQGFTAFFDNELQ 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K++ A E ++ H G L PP ++ E + ++ + D+ +GL
Sbjct: 288 LHRTKLQGASEFYQKHAGTLLVPPTSKE-LKEFPELVRHEFTINEKT------DVVFSGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + K A + W G+++ +R+ ++
Sbjct: 341 GWIRVNEK--AKIAAWAPKGVDVVIRKAII 368
>gi|312871750|ref|ZP_07731838.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 3008A-a]
gi|329920071|ref|ZP_08276902.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN 1401G]
gi|311092692|gb|EFQ51048.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 3008A-a]
gi|328936525|gb|EGG32969.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN 1401G]
Length = 370
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 190/412 (46%), Gaps = 53/412 (12%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G+I ++ K KLS + +E C RC LR+Y ++ V EN
Sbjct: 9 IGCGSILQD-----KDSKLSGYMPHSAFNKMIQEPDTSVYCQRCFRLRHYNEI-TPVNEN 62
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ DF RL+ GN A ++V VVD DF+ SL L+ D +
Sbjct: 63 ---NDDF-----LRLLNSLGNKKA-LIVNVVDLFDFNN--------SLIASLDRFIGDNE 105
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA-PKLNGVYLVSARKDLGVRN 386
VLVG KVDL P +++ W+R A G PK ++L+SA K RN
Sbjct: 106 F-------VLVGNKVDLFPKNSKESKIKDWMRQEANRNGLFPK--KIFLLSAIKK---RN 153
Query: 387 LLAFIKELA--GPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRI 444
+ I LA G +++ +G N GKSTLIN + + +T + PGTTL ++I
Sbjct: 154 IDELINYLATKGKNEDIYFVGTTNVGKSTLINAIIETRSEYKNLITTSKFPGTTLDSIKI 213
Query: 445 GGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMR 504
L L DTPG+L M+ RL E ++V +K+L+P TY++ GQ + + GL R
Sbjct: 214 P--LNEGHYLVDTPGILSKKQMASRLTGSELELVAPKKQLKPATYQLLPGQTIFLAGLGR 271
Query: 505 LDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKD 564
+D + T++ + ++ LH K NADE + H L PP D +LG K
Sbjct: 272 IDFIKGPASGF--TIYVARDLYLHRTKTINADEFYLKHKSDLLNPPCDSD---DLGALKG 326
Query: 565 RKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ S S DI G+G+ + + + +T +GI + +R L+
Sbjct: 327 QLYSTSEKS------DILFGGVGFIT--VPSGVVIKAYTPEGIGLGIRRALI 370
>gi|427440016|ref|ZP_18924545.1| ribosome biogenesis GTPase YqeH [Pediococcus lolii NGRI 0510Q]
gi|425787848|dbj|GAC45333.1| ribosome biogenesis GTPase YqeH [Pediococcus lolii NGRI 0510Q]
Length = 322
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 178/364 (48%), Gaps = 43/364 (11%)
Query: 254 LRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAK 313
+R+Y NE+A I D DF ++++ + + +VV VVD DF+G
Sbjct: 1 MRHY----NEIAPVSISDDDFRKLLS------QISDSDSLVVYVVDMFDFNG-------- 42
Query: 314 SLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGV 373
SL L D + +LVG K D+ P + R+ W+R +AKA G ++ V
Sbjct: 43 SLIPGLHRFVGDNPV-------LLVGNKADVFPKSIKRHRMREWLRQQAKANGIEPVD-V 94
Query: 374 YLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF-AKKEGVKVSKLTEA 432
+ SA++ V L I++L R +V+V+G N GKSTLIN+ A + G+K +T +
Sbjct: 95 MITSAKQRPAVEQLFDKIEQLRDGR-DVYVVGVTNVGKSTLINSLIALRNGIK-DVITTS 152
Query: 433 PIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVK 492
PGTTL RI +K+ DTPG++H M+ L ++ K + +K ++PR Y++
Sbjct: 153 RFPGTTLD--RIEIPFDDHSKMIDTPGIVHNDQMAHVLTAEDLKYISPKKTIKPRVYQLG 210
Query: 493 GGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIG 552
Q + G L R D + + T VT + N+ +H K+ NAD ++ H G L PP
Sbjct: 211 DEQTLFAGALARFDYEHS---TGSVTAYFDNNLMIHRTKLANADHFYEKHAGELLTPPAA 267
Query: 553 QDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLR 612
++ A+ L K+ S D+ GLGW + + + +T W GI + +R
Sbjct: 268 ENLAN-LPELARHHFKIEEDS------DVVFEGLGW--IAVPAGSVVTAWAPKGISVVIR 318
Query: 613 EPLV 616
L+
Sbjct: 319 RALI 322
>gi|430750628|ref|YP_007213536.1| ribosome biogenesis GTPase YqeH [Thermobacillus composti KWC4]
gi|430734593|gb|AGA58538.1| ribosome biogenesis GTPase YqeH [Thermobacillus composti KWC4]
Length = 375
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 180/374 (48%), Gaps = 38/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVD 302
E +C RC +R+Y N+V + DF R++ SG A +VV +VD D
Sbjct: 39 EDAICRRCFRIRHY----NDVTHVAVDQDDFLRML-------SGIAGTDSLVVHIVDLFD 87
Query: 303 FDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA 362
F+G S+ L+ + + +LV K+DLLP + R+ WV+ +A
Sbjct: 88 FEG--------SVISGLQRFVGNNPV-------LLVVNKIDLLPKSTNWNRVRNWVQRQA 132
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE 422
K G K + L SA K G ++ I+ L G R +++V+GA N GKSTLIN +
Sbjct: 133 KLLGL-KPAEIVLCSAAKRTGFDRVIEAIQALRGGR-DIYVVGATNVGKSTLINRLIRDY 190
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+LT + PGTTL +RI L + DTPG+++P+ ++ + + + + K
Sbjct: 191 SDLDRELTVSRYPGTTLDQIRIP--LDDSRYIIDTPGIVYPYRLTETVPKGVLQRLLPEK 248
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
L+P Y++ Q + G L R D + ++ T++ SP++ +H K+E ADE++ H
Sbjct: 249 PLKPLVYQLNERQTLFFGALARFDFVRGEPQSF--TLYVSPSLYVHRTKLERADEVYAEH 306
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP D + W L++ S DI+ +GLGW A + ++
Sbjct: 307 KGELLAPP-NADELDAIAPWTRHSLRIPPGS----RTDISISGLGWIRANSSAGAFVEVY 361
Query: 603 TYDGIEITLREPLV 616
G+ + LRE ++
Sbjct: 362 APKGVHVILREAMI 375
>gi|148997805|ref|ZP_01825369.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70]
gi|168575059|ref|ZP_02721022.1| GTP-binding protein [Streptococcus pneumoniae MLV-016]
gi|307068375|ref|YP_003877341.1| putative GTPase [Streptococcus pneumoniae AP200]
gi|419471635|ref|ZP_14011494.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA07914]
gi|419504483|ref|ZP_14044151.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47760]
gi|421239079|ref|ZP_15695643.1| GTP-binding protein [Streptococcus pneumoniae 2071247]
gi|421314623|ref|ZP_15765210.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47562]
gi|147756304|gb|EDK63346.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70]
gi|183578795|gb|EDT99323.1| GTP-binding protein [Streptococcus pneumoniae MLV-016]
gi|306409912|gb|ADM85339.1| Predicted GTPase [Streptococcus pneumoniae AP200]
gi|379546351|gb|EHZ11490.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA07914]
gi|379605871|gb|EHZ70621.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47760]
gi|395600722|gb|EJG60877.1| GTP-binding protein [Streptococcus pneumoniae 2071247]
gi|395913308|gb|EJH24161.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae GA47562]
Length = 368
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 186/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAYEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|225857361|ref|YP_002738872.1| GTP-binding protein YqeH [Streptococcus pneumoniae P1031]
gi|444409512|ref|ZP_21206102.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0076]
gi|444412894|ref|ZP_21209213.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0153]
gi|444421884|ref|ZP_21217552.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0446]
gi|225725831|gb|ACO21683.1| GTP-binding protein [Streptococcus pneumoniae P1031]
gi|444274133|gb|ELU79788.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0153]
gi|444279361|gb|ELU84762.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0076]
gi|444288836|gb|ELU93725.1| ribosome biogenesis GTPase YqeH [Streptococcus pneumoniae PNI0446]
Length = 368
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 185/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKFEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|333395903|ref|ZP_08477720.1| GTPase YqeH [Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
gi|420146238|ref|ZP_14653668.1| GTP-binding protein [Lactobacillus coryniformis subsp. coryniformis
CECT 5711]
gi|398402054|gb|EJN55447.1| GTP-binding protein [Lactobacillus coryniformis subsp. coryniformis
CECT 5711]
Length = 373
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 189/382 (49%), Gaps = 41/382 (10%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A E GEV C RC LR+Y NE+++ + D DF +L+ G+ +A ++
Sbjct: 33 ALEKGLAAGEV-YCQRCFRLRHY----NEISDVRLTDDDF-----LKLLTQIGDTDA-LI 81
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
V V+D DF G S+ L + K P L LVG KVD+LP V ++
Sbjct: 82 VNVIDIFDFSG--------SIIPGLH------RFVGKNPVL-LVGNKVDVLPKSVKRGKV 126
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
W++ +A A G L+ V L SA+ + LLA I + R +V+V+G N GKSTL
Sbjct: 127 RHWLQEQAHAVGLRPLD-VLLTSAKSGYELDELLAAIDKYRAGR-DVYVVGVTNVGKSTL 184
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN K+ +T + PGTTL + I L +L DTPG++H M+ L +
Sbjct: 185 INQIIKRTTGTQDLITTSRFPGTTLDKIEIP--LDDGHQLIDTPGIIHREQMAYYLGPKD 242
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
++V +K ++P+T+++ Q + +GGL R D ++ T++ N+ +H K+ N
Sbjct: 243 LRLVAPQKPIKPKTFQLNSEQTLFLGGLARFDYERGPHTGF--TLYLDNNLLVHRTKLSN 300
Query: 535 ADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
AD+ + G LQPP R +EL + L + V D+ AGLGW + +
Sbjct: 301 ADDFYDRQAGKLLQPP----RPNELADFP--PLARIQFTPKVKS-DLVFAGLGWIT--VP 351
Query: 595 GEASLTLWTYDGIEITLREPLV 616
+++ W +G+ +T+R L+
Sbjct: 352 AGITVSGWAPEGVAVTMRPALI 373
>gi|418637114|ref|ZP_13199444.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis VCU139]
gi|374839804|gb|EHS03312.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis VCU139]
Length = 366
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 180/380 (47%), Gaps = 53/380 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY +V+ D D L+ + +G++V VVD DF
Sbjct: 33 EDVICRRCFRLKNYNEVQ---------DVGMDSEDFLNLLNGLSD-RSGIIVNVVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++LV K+DLLP Q++ R+ W++ AK
Sbjct: 83 EGSFINALKRIVGNK---------------KIILVANKLDLLPKQINHRRVKEWLKRSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G+ +LL I + +V+++G N GKSTLIN +
Sbjct: 128 KYGL-EAEEVVLISAEKGWGIEDLLTAINQ-NRDHDDVYIVGTTNVGKSTLINKLIELSV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L + +YDTPG++ H M+ + E K + +KE
Sbjct: 186 GEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQEHQMTHLVTEKELKTIIPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ Q + GGL R+D + + S ++++H K E A+E+WKN +
Sbjct: 244 IKQRVYQLNESQTLFFGGLARIDYVSGGKRPL--ICFFSNDLNIHRTKTEKANELWKNQL 301
Query: 544 GIRLQPP-------IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
G L PP + +A L T K+++ DI +GLG+ + +
Sbjct: 302 GDLLTPPNNVSNFNLKDIKAVRLETGKEKR-------------DIMISGLGFIT--IDSG 346
Query: 597 ASLTLWTYDGIEITLREPLV 616
A + + +++ LR ++
Sbjct: 347 AKVIVRVPKNVDVVLRNSIL 366
>gi|377809846|ref|YP_005005067.1| ribosome biogenesis GTPase YqeH [Pediococcus claussenii ATCC
BAA-344]
gi|361056587|gb|AEV95391.1| ribosome biogenesis GTPase YqeH [Pediococcus claussenii ATCC
BAA-344]
Length = 371
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 179/376 (47%), Gaps = 42/376 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GE+ C RC LR+Y NE+A + D DF R+++ + ++V V+D
Sbjct: 38 ESGEL-YCQRCFRLRHY----NEIAPVNLTDDDFRRLLS------QISETDSLIVYVMDL 86
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
D +G SL L D ++ +LVG K D+LP + R+ W+R
Sbjct: 87 FDVNG--------SLIPGLHRFIGDNEV-------LLVGNKEDILPKSLKRPRMKEWLRQ 131
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
+A A G ++ V L SA+ V NL I++ + +V+V+G N GKSTLIN
Sbjct: 132 QAFANGIRPID-VVLTSAKNRHEVNNLFEAIEKYRNGK-DVYVVGVTNVGKSTLINQLIA 189
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+T + PGTTL + I ++ L DTPG++H M+ L ++ K
Sbjct: 190 IRNDIKDLITTSRFPGTTLDKIEIP--FDEESSLIDTPGIVHREQMAHVLEPEDLKYAAP 247
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+K ++PR +++ G Q + +G L R D +++ V + N+++H K+ENAD+ ++
Sbjct: 248 QKTIKPRVFQLNGDQTLFMGALARFDYQRSNGP---VVAYFENNLNIHRTKLENADQFYE 304
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H G L PP + +L VS S DI GLGW S + A +T
Sbjct: 305 KHAGELLTPPTNGN-FEKLPKLIKHNFSVSEKS------DIVFEGLGWIS--VPAGAIIT 355
Query: 601 LWTYDGIEITLREPLV 616
W +GI + R+ ++
Sbjct: 356 GWAPEGISVITRKAMI 371
>gi|225871191|ref|YP_002747138.1| GTP-binding protein YqeH [Streptococcus equi subsp. equi 4047]
gi|225700595|emb|CAW95118.1| GTP-binding protein [Streptococcus equi subsp. equi 4047]
Length = 372
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 180/371 (48%), Gaps = 40/371 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y N++ + I D +F RL+ G+++A +VV V+D DF+G
Sbjct: 40 CQRCFRLRHY----NDITDVHITDEEF-----LRLLHEVGDSDA-LVVNVIDIFDFNGSV 89
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
++ + A +D ++LVG K D+LP V +++ +W+ RA G
Sbjct: 90 IPGLSRFV------AGND---------VLLVGNKKDILPKSVKDSKVTQWLTERAHEEGL 134
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ V L SA+ ++ L+ I +L R +V+V+G N GKSTLIN ++
Sbjct: 135 RPLD-VLLTSAQNKYAIKELIERIDQLRQGR-DVYVVGVTNVGKSTLINAIIQEITGDKD 192
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL + I L + ++DTPG++H H M+ L+ K + +KE++P+
Sbjct: 193 VITTSRFPGTTLDKIEIP--LDDGSFIFDTPGIIHRHQMAHYLSAKNLKFISPKKEIKPK 250
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ Q + +GGL R D S E T + + LH K+E AD + G L
Sbjct: 251 TYQLNPEQTLFLGGLARFDF--ISGERQGFTAYFDNQLLLHRTKLEGADAFYDKQAGQLL 308
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEAS--LTLWTYD 605
PP ++ D V +D+ +GLGW + E + + W D
Sbjct: 309 TPPDKKE-------LDDFPRLVRHEFLLDQKVDVVFSGLGWIRVNANKETATKVAAWAPD 361
Query: 606 GIEITLREPLV 616
G+ + +R+ ++
Sbjct: 362 GVAVVVRKAII 372
>gi|336394026|ref|ZP_08575425.1| GTPase YqeH [Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 373
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 189/382 (49%), Gaps = 41/382 (10%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A E GEV C RC LR+Y NE+++ + D DF +L+ G+ +A ++
Sbjct: 33 ALEKGLAAGEV-YCQRCFRLRHY----NEISDVRLTDDDF-----LKLLTQIGDTDA-LI 81
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
V V+D DF G S+ L + K P L LVG KVD+LP V ++
Sbjct: 82 VNVIDIFDFSG--------SIIPGLH------RFVGKNPVL-LVGNKVDVLPKSVKRGKV 126
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
W++ +A A G L+ V L SA+ + LLA I + R +V+V+G N GKSTL
Sbjct: 127 RHWLQEQAHAVGLRPLD-VLLTSAKSGYELDELLAAIDKYRAGR-DVYVVGVTNVGKSTL 184
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN K+ +T + PGTTL + I L +L DTPG++H M+ L +
Sbjct: 185 INQIIKRTTGTQDLITTSRFPGTTLDKIEIP--LDDGHQLIDTPGIIHREQMAYYLGPKD 242
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
++V +K ++P+T+++ Q + +GGL R D ++ T++ N+ +H K+ N
Sbjct: 243 LRLVAPQKPIKPKTFQLNSEQTLFLGGLARFDYERGPHTGF--TLYLDNNLLVHRTKLSN 300
Query: 535 ADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
AD+ + G LQPP R +EL + L + V D+ AGLGW + +
Sbjct: 301 ADDFYDRQAGKLLQPP----RPNELADFP--PLARIQFTPKVKS-DLVFAGLGWIT--VP 351
Query: 595 GEASLTLWTYDGIEITLREPLV 616
+++ W +G+ +T+R L+
Sbjct: 352 AGITVSGWAPEGVAVTMRPALI 373
>gi|420177913|ref|ZP_14684247.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM057]
gi|420181402|ref|ZP_14687603.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM053]
gi|394246318|gb|EJD91578.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM053]
gi|394247100|gb|EJD92348.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis
NIHLM057]
Length = 366
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 174/349 (49%), Gaps = 39/349 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NEV + + DF ++ K G++V VVD DF
Sbjct: 33 EDVICRRCFRLKNY----NEVQDVGMESEDFLNLLTGLSEK------KGIIVNVVDVFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++LV K+DLLP Q++ R+ W+R A+
Sbjct: 83 EGSFINAIQRIVGNK---------------KIILVANKIDLLPKQINHRRVKEWLRKSAR 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G+ LL I + + +V+++G N GKSTLIN ++
Sbjct: 128 KYGL-EAEDVVLISANKGWGIDELLQSINHVRN-KDDVYIVGTTNVGKSTLINKLIEQSV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L K+ ++DTPG++ H M+ ++ +E K++ + E
Sbjct: 186 GEKDVVTTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQMTNYVSENELKIIIPKNE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ Y++ Q + GGL R+D + + S ++++H K E A+++WK+ +
Sbjct: 244 IKQHVYQLNEKQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWKSQL 301
Query: 544 GIRLQPPIGQD-RASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
G L PP QD + L K +L+ T DI +GLG+ ++
Sbjct: 302 GALLSPP--QDAQQFNLNDVKAVRLETGKTKR-----DIMISGLGFITI 343
>gi|332638513|ref|ZP_08417376.1| GTPase YqeH [Weissella cibaria KACC 11862]
Length = 380
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 189/417 (45%), Gaps = 50/417 (11%)
Query: 201 DGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQV 260
DG G G L++ +K +L A + + E+ +C RC LR+Y
Sbjct: 13 DGLRCIGCG------ALIQTERKGELGYAPMSALLKGFENEE---VLCQRCFRLRHY--- 60
Query: 261 KNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLE 320
NE+ + D DF RL+ + +VV V+D DF G SL L
Sbjct: 61 -NEIQPVDLTDDDF------RLLLNEISTTDSLVVYVMDVFDFSG--------SLIPGLH 105
Query: 321 EAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARK 380
+ K P L LVG KVD+LP + +++ W+R +A G ++ V L S +
Sbjct: 106 ------RFVGKNPVL-LVGNKVDVLPKSLKRSKIKDWMRQQANVAGLRPID-VMLTSGKS 157
Query: 381 DLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK-KEGVKVSKLTEAPIPGTTL 439
V LL I++ R +V+V+G N GKSTLIN K G +T + PGTTL
Sbjct: 158 GDDVPELLDMIEKYREGR-SVYVVGVTNVGKSTLINQIIKDATGDSKDVITTSRFPGTTL 216
Query: 440 GILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHV 499
RI L + DTPG++H M+ L + K V +KEL+P+TY++ Q + +
Sbjct: 217 D--RIEIPLDDDTFIIDTPGIIHQDQMAHYLTPKDLKYVSPQKELKPKTYQLNPEQTLFM 274
Query: 500 GGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASEL 559
G L R D Q E +T + N+ +H K+E ADE + H G L PP ++ L
Sbjct: 275 GALARFDFIQG--EKAGITAYFENNLMIHRTKLEKADEFYSKHAGELLMPPTTEN-LDML 331
Query: 560 GTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ + KV+ + DI GLGW + + + W +G+ + R ++
Sbjct: 332 PPLQRHEFKVTEKT------DIVIDGLGWIT--VPANTVVAGWAPEGVSVLTRRAMI 380
>gi|389856062|ref|YP_006358305.1| GTP-binding protein YqeH [Streptococcus suis ST1]
gi|353739780|gb|AER20787.1| GTP-binding protein YqeH [Streptococcus suis ST1]
Length = 368
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 186/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E G++ C RC LR+Y NE+++ I D DF +L+ G ++A
Sbjct: 26 QSALEKGLETGQL-YCQRCFRLRHY----NEISDVNISDDDF-----LKLLHSVGESDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ + LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFISGNDVLLVGNKQDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G
Sbjct: 114 KSVKTGKVTQWLTERAHEIGMRPVD-VVLTSAQNKQAIKDLIEKIEQHRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K + RKE++P+TY++ Q + + GL R D + E T + +
Sbjct: 230 AHYLTAKNLKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDF--VAGERQGFTAFFDNELQ 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K++ A E ++ H G L PP ++ E + ++ + D+ +GL
Sbjct: 288 LHRTKLQGASEFYQKHAGSLLVPPTSKE-LKEFPELVRHEFTINEKT------DVVFSGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + K A + W G+++ +R+ ++
Sbjct: 341 GWIRVNEK--AKIAAWAPKGVDVVIRKAII 368
>gi|423612546|ref|ZP_17588407.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD107]
gi|401246135|gb|EJR52487.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD107]
Length = 368
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 180/374 (48%), Gaps = 39/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGQSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ G + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELAEAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + LYDTPG+++ H M+ + + K++
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEASSLYDTPGIINHHQMAHYVGKQSLKLITPTT 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GGL R D T S +++H K+E ADE+++ H
Sbjct: 244 EIKPMVFQLNEEQTLFFGGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYERH 301
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP ++ + + + + DV +GLGW ++ G A +
Sbjct: 302 AGELLNPPTPEE-LENMPEFVKYEFNIREPKTDV-----VFSGLGWVTVNESG-AKIVAH 354
Query: 603 TYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 355 VPKGVSVSLRKSLI 368
>gi|414564751|ref|YP_006043712.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus ATCC
35246]
gi|338847816|gb|AEJ26028.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus ATCC
35246]
Length = 372
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 180/371 (48%), Gaps = 40/371 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y N++ + I D +F RL+ G+++A +VV V+D DF+G
Sbjct: 40 CQRCFRLRHY----NDITDVHITDEEF-----LRLLHEVGDSDA-LVVNVIDIFDFNGSV 89
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
++ + A +D ++LVG K D+LP V +++ +W+ RA G
Sbjct: 90 IPGLSRFV------AGND---------VLLVGNKKDILPKSVKDSKVTQWLTERAHEEGL 134
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ V L SA+ ++ L+ I +L R +V+V+G N GKSTLIN ++
Sbjct: 135 RPLD-VLLTSAQNKYAIKELIERIDQLRQGR-DVYVVGVTNVGKSTLINAIIQEITGDKD 192
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL + I L + ++DTPG++H H M+ L+ K + +KE++P+
Sbjct: 193 VITTSRFPGTTLDKIEIP--LDDGSFIFDTPGIIHRHQMAHYLSAKNLKFISPKKEIKPK 250
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ Q + +GGL R D S E T + + LH K+E AD + G L
Sbjct: 251 TYQLNPEQTLFLGGLARFDF--ISGERQGFTAYFDNQLLLHRTKLEGADAFYDKQAGQLL 308
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEAS--LTLWTYD 605
PP ++ D V +D+ +GLGW + E + + W D
Sbjct: 309 TPPDKKE-------LDDFPRLVRHEFLLDQKVDVVFSGLGWIRVNANKETATKVAAWAPD 361
Query: 606 GIEITLREPLV 616
G+ + +R+ ++
Sbjct: 362 GVAVVVRKAII 372
>gi|418126403|ref|ZP_12763308.1| hypothetical protein SPAR86_1773 [Streptococcus pneumoniae GA44511]
gi|353795467|gb|EHD75815.1| hypothetical protein SPAR86_1773 [Streptococcus pneumoniae GA44511]
Length = 336
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 183/388 (47%), Gaps = 65/388 (16%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E GEV C RC LR+Y NE+ + + + DF +L+ G+++A +VV V+D
Sbjct: 2 ETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSDA-LVVNVIDI 50
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLPSQVSPTRL 354
DF+G + LP+ V LVG K D+LP V ++
Sbjct: 51 FDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILPKSVKSGKI 89
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
+W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G N GKSTL
Sbjct: 90 SQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTL 147
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN ++ + +T + PGTTL + I L + +YDTPG++H H M+ L
Sbjct: 148 INAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAHYLTAKN 205
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
K V +KE++P+TY++ Q + +GGL R D + T + + LH K+E
Sbjct: 206 LKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRSKLEG 263
Query: 535 ADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
A + H+G L PP +++ + T KD+ D+ +GLGW
Sbjct: 264 ASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------DLVISGLGW 310
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
+ + G A + +W +G+ + R+ ++
Sbjct: 311 --IRVTGIAKVAVWAPEGVAVVTRKAII 336
>gi|289550632|ref|YP_003471536.1| GTP-binding protein YqeH, possibly involved in replication
initiation [Staphylococcus lugdunensis HKU09-01]
gi|385784260|ref|YP_005760433.1| putative GTPase [Staphylococcus lugdunensis N920143]
gi|418413936|ref|ZP_12987152.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|289180164|gb|ADC87409.1| GTP-binding protein YqeH, possibly involved in replication
initiation [Staphylococcus lugdunensis HKU09-01]
gi|339894516|emb|CCB53797.1| putative GTPase [Staphylococcus lugdunensis N920143]
gi|410877574|gb|EKS25466.1| ribosome biogenesis GTPase YqeH [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 366
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 180/380 (47%), Gaps = 53/380 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY +V+ D D L+ + +G++V VVD DF
Sbjct: 33 EDVICRRCFRLKNYNEVQ---------DVGMDSEDFLNLLNGLSD-RSGIIVNVVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++LV K+DLLP Q++ R+ W++ AK
Sbjct: 83 EGSFINALKRIVGNK---------------KIILVANKLDLLPKQINHRRVKEWLKRSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G+ +LL I + +V+++G N GKSTLIN +
Sbjct: 128 KYGL-EAEEVVLISAEKGWGIEDLLTAINQ-NRDHEDVYIVGTTNVGKSTLINKLIELSV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L + +YDTPG++ H M+ + E K + +KE
Sbjct: 186 GEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQEHQMTHLVTEKELKTIIPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ Q + GGL R+D + + S ++++H K E A+E+WKN +
Sbjct: 244 IKQRVYQLNESQTLFFGGLARIDYVSGGKRPL--ICFFSNDLNIHRTKTEKANELWKNQL 301
Query: 544 GIRLQPP-------IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
G L PP + +A L T K+++ DI +GLG+ + +
Sbjct: 302 GDLLTPPNNVSNFNLKDIKAVRLETGKEKR-------------DIMISGLGFIT--IDSG 346
Query: 597 ASLTLWTYDGIEITLREPLV 616
A + + +++ LR ++
Sbjct: 347 AKVIVRVPKNVDVVLRNSIL 366
>gi|146320205|ref|YP_001199916.1| GTP-binding protein YqeH [Streptococcus suis 98HAH33]
gi|253751231|ref|YP_003024372.1| GTP-binding protein YqeH [Streptococcus suis SC84]
gi|253753132|ref|YP_003026272.1| GTP-binding protein YqeH [Streptococcus suis P1/7]
gi|253754955|ref|YP_003028095.1| GTP-binding protein YqeH [Streptococcus suis BM407]
gi|330832202|ref|YP_004401027.1| GTP-binding protein YqeH [Streptococcus suis ST3]
gi|386577334|ref|YP_006073739.1| GTP-binding protein [Streptococcus suis GZ1]
gi|386579314|ref|YP_006075719.1| GTP-binding protein YqeH [Streptococcus suis JS14]
gi|386581378|ref|YP_006077782.1| GTP-binding protein YqeH [Streptococcus suis SS12]
gi|386583488|ref|YP_006079891.1| GTP-binding protein YqeH [Streptococcus suis D9]
gi|386587609|ref|YP_006084010.1| GTP-binding protein YqeH [Streptococcus suis A7]
gi|145691011|gb|ABP91516.1| Predicted GTPase [Streptococcus suis 98HAH33]
gi|251815520|emb|CAZ51100.1| GTP-binding protein [Streptococcus suis SC84]
gi|251817419|emb|CAZ55157.1| GTP-binding protein [Streptococcus suis BM407]
gi|251819377|emb|CAR44789.1| GTP-binding protein [Streptococcus suis P1/7]
gi|292557796|gb|ADE30797.1| GTP-binding protein [Streptococcus suis GZ1]
gi|319757506|gb|ADV69448.1| GTP-binding protein YqeH [Streptococcus suis JS14]
gi|329306425|gb|AEB80841.1| GTP-binding protein YqeH [Streptococcus suis ST3]
gi|353733524|gb|AER14534.1| GTP-binding protein YqeH [Streptococcus suis SS12]
gi|353735634|gb|AER16643.1| GTP-binding protein YqeH [Streptococcus suis D9]
gi|354984770|gb|AER43668.1| GTP-binding protein YqeH [Streptococcus suis A7]
Length = 368
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 186/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E G++ C RC LR+Y NE+++ I D DF +L+ G ++A
Sbjct: 26 QSALEKGLETGQL-YCQRCFRLRHY----NEISDVNISDDDF-----LKLLHSVGESDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ + LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFISGNDVLLVGNKQDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G
Sbjct: 114 KSVKTGKVTQWLTERAHEIGMRPVD-VVLTSAQNKQAIKDLIEKIEQHRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K + RKE++P+TY++ Q + + GL R D + E T + +
Sbjct: 230 AHYLTAKNLKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDF--VAGERQGFTAFFDNELQ 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K++ A E ++ H G L PP ++ E + ++ + D+ +GL
Sbjct: 288 LHRTKLQGASEFYQKHAGSLLVPPTSKE-LKEFPELVRHEFTINEKT------DVVFSGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + K A + W G+++ +R+ ++
Sbjct: 341 GWIRVNEK--AKIAAWAPKGVDVVIRKAII 368
>gi|240104509|pdb|3H2Y|A Chain A, Crystal Structure Of Yqeh Gtpase From Bacillus Anthracis
With Dgdp Bound
Length = 368
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 183/376 (48%), Gaps = 43/376 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGKSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWXRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ G + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRXIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H + + + K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQXAHYVGKQSLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 244 EIKPXVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 301
Query: 543 VGIRLQPPIGQ--DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
G L PP + + EL + + ++ T D+ +GLGW ++ G A +
Sbjct: 302 AGDLLSPPTPEELENXPELVKY-EFNIREPKT-------DVVFSGLGWVTVNEPG-AKIV 352
Query: 601 LWTYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 353 AHVPKGVSVSLRKSLI 368
>gi|456011614|gb|EMF45351.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Planococcus halocryophilus Or1]
Length = 367
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 186/378 (49%), Gaps = 43/378 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
EK E+ +C RC L+NY NE+ + D DF R++ G + G++V +VD
Sbjct: 31 EKDEI-ICQRCFRLKNY----NELQPVSLTDDDF-----LRILNGLGERD-GLIVKIVDI 79
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G + + + +D ++L+ K DLLP V +L W++
Sbjct: 80 FDFNGSWLPGLHRFV------GNND---------ILLIANKADLLPKSVKQHKLIHWMKQ 124
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
A+ G ++ V VSA + GV + I++ + +V+V+G N GKST IN K
Sbjct: 125 EARKLGLQPID-VLTVSAHRGTGVPEAMEAIEKYRKGK-DVYVVGCTNVGKSTFINRVIK 182
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ + +T + PGTTL ++ I L + L+DTPG+++ H ++ L + K +
Sbjct: 183 QATGQSDVITTSHFPGTTLDMIEIP--LDDERSLFDTPGIINHHQLAHHLKTADLKQIMP 240
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++PR +++ Q + +GGL R D + E TV + ++ +H K++NAD ++
Sbjct: 241 KKEIKPRVFQLNAEQTLFIGGLARFDFIKG--ERSSFTVHIANDLPIHRTKLDNADALYA 298
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNG--IDIAAAGLGWFSLGLKGEAS 598
H+G L PP + +KD ++ + + DI +GLGW ++ G A
Sbjct: 299 QHLGDMLAPPSAE--------YKDDFPELVRHEFSIKDAKTDIVFSGLGWITIQ-HGNAV 349
Query: 599 LTLWTYDGIEITLREPLV 616
+ G+E+ LR L+
Sbjct: 350 VAAHAPKGVEVLLRPSLI 367
>gi|375309512|ref|ZP_09774793.1| hypothetical protein WG8_3318 [Paenibacillus sp. Aloe-11]
gi|375078821|gb|EHS57048.1| hypothetical protein WG8_3318 [Paenibacillus sp. Aloe-11]
Length = 375
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 182/373 (48%), Gaps = 36/373 (9%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC ++NY NE + + +F +L+ G+ +A +V+ +VD DF
Sbjct: 39 EPVICQRCFRIKNY----NETSSVTVDQDEF-----LKLLSQIGDKDA-LVIHIVDIFDF 88
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G SL L+ + P ++L K DLLP + ++ WV+ +AK
Sbjct: 89 EG--------SLISGLQ------RFVGSNP-VILAVNKTDLLPKVTNWNKVRNWVQKQAK 133
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + + L SA+K+ G LL + EL R +V+V+GA N GKSTLIN +
Sbjct: 134 EQGL-RTADIVLCSAKKNQGFDRLLDVVSELRDNR-DVYVVGATNVGKSTLINRLIRDYS 191
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+LT + PGTTL ++ I L + DTPG+++P S ++R + + K
Sbjct: 192 DMEQELTTSRYPGTTLDMVNIP--LDDGKHIIDTPGIVYPWRFSEIVSRRDLSAIMPDKP 249
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+P Y++ GQ + GG+ R D + ++ T + + + +H K+E AD+++ +H
Sbjct: 250 LKPAAYQLDSGQTLFFGGMGRFDFIEGQHQSF--TCYINGGLKIHRTKLERADQLFADHA 307
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP +D+ +E+ W + +V + DI +GLGW + A + +
Sbjct: 308 GELLSPPT-RDQLAEMPEWTRHEFRVPRKAPS----DIYISGLGWIRVNSDSGALVAVHV 362
Query: 604 YDGIEITLREPLV 616
GI + LR L+
Sbjct: 363 PRGIRVLLRPALI 375
>gi|403061018|ref|YP_006649234.1| GTPase YqeH [Streptococcus suis S735]
gi|402808344|gb|AFQ99835.1| GTPase YqeH [Streptococcus suis S735]
Length = 368
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 186/390 (47%), Gaps = 53/390 (13%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E G++ C RC LR+Y NE+++ I D DF +L+ G ++A
Sbjct: 26 QSALEKGLETGQL-YCQRCFRLRHY----NEISDVNISDDDF-----LKLLHSVGESDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ + LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFISGNDVLLVGNKQDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G
Sbjct: 114 KSVKTGKVTQWLTERAHEIGMRPVD-VVLTSAQNKQAIKDLIEKIEQHRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K + RKE++P+TY++ Q + + GL R D + E T + +
Sbjct: 230 AHYLTAKNLKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDF--VAGERKGFTAFFDNELQ 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH K++ A E ++ H G L PP ++ E + ++ + D+ +GL
Sbjct: 288 LHRTKLQGASEFYQKHAGSLLVPPTSKE-LKEFPELVRHEFTINEKT------DVVFSGL 340
Query: 587 GWFSLGLKGEASLTLWTYDGIEITLREPLV 616
GW + K A + W G+++ +R+ ++
Sbjct: 341 GWIRVNEK--AKIAAWAPKGVDVVIRKAII 368
>gi|402300001|ref|ZP_10819554.1| GTPase YqeH [Bacillus alcalophilus ATCC 27647]
gi|401724792|gb|EJS98121.1| GTPase YqeH [Bacillus alcalophilus ATCC 27647]
Length = 371
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 189/374 (50%), Gaps = 39/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
+V +C RC L++Y NEV + + D DF +++ T G +A ++V +VD DF
Sbjct: 34 DVVICQRCFRLKHY----NEVQDVSLTDDDFLKILNTL-----GEKDA-LIVKIVDVFDF 83
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + + K+D ++LV KVDLLP +L W++ AK
Sbjct: 84 NGSWLQGLHRFV------GKND---------VLLVANKVDLLPKSFKRNKLINWLKKSAK 128
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK-E 422
G ++ V L+SA K V + A I +L + +V+++GA N GKST IN + +
Sbjct: 129 ELGLRPVD-VCLMSAAKGESVIEIAATIDKLRQGK-DVYIVGATNVGKSTFINKMIQAFD 186
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
G + +T + PGTTL ++ I L LYDTPG+++ H M+ +++ E K++ +K
Sbjct: 187 GDEEQLITTSHFPGTTLDMIDIP--LDDGRTLYDTPGIINHHQMAHYIDKKELKLITPKK 244
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P ++ GQA+ GGL RLD Q E + S + +H K+E AD+++ NH
Sbjct: 245 EIKPIVNQLNEGQALFFGGLARLDFKQG--ERSSFVSYFSNELQIHRTKVEKADQLYANH 302
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
+G L PP G + + ++ +D+ +GLG+ ++ +
Sbjct: 303 LGELLAPP-GPKSKEDFPPLVKKDFRIKDKK-----VDLVFSGLGFVTIN-GTNLDIAAH 355
Query: 603 TYDGIEITLREPLV 616
G+ +++R+ ++
Sbjct: 356 VPKGVTVSIRDSII 369
>gi|349611531|ref|ZP_08890766.1| ribosome biogenesis GTPase YqeH [Lactobacillus sp. 7_1_47FAA]
gi|348608624|gb|EGY58604.1| ribosome biogenesis GTPase YqeH [Lactobacillus sp. 7_1_47FAA]
Length = 370
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 190/412 (46%), Gaps = 53/412 (12%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G+I ++ K KLS + +E C RC LR+Y ++ V EN
Sbjct: 9 IGCGSILQD-----KDSKLSGYMPHSAFNKMIQEPDTSVYCQRCFRLRHYNEI-TPVNEN 62
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ DF RL+ GN A ++V VVD DF+ SL L+ D +
Sbjct: 63 ---NDDF-----LRLLNSLGNKKA-LIVNVVDLFDFNN--------SLIASLDRFIGDNE 105
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA-PKLNGVYLVSARKDLGVRN 386
VLVG KVDL P +++ W+R A G PK ++L+SA K RN
Sbjct: 106 F-------VLVGNKVDLFPKNSKESKIKDWMRQEANRNGLFPK--KIFLLSAIKK---RN 153
Query: 387 LLAFIKELA--GPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRI 444
+ I LA G +++ +G N GKSTLIN + + +T + PGTTL ++I
Sbjct: 154 IDELINYLATKGKNEDIYFVGTTNVGKSTLINAIIETRSEYKNLITTSKFPGTTLDSIKI 213
Query: 445 GGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMR 504
L L DTPG+L M+ RL + ++V +K+L+P TY++ GQ + + GL R
Sbjct: 214 P--LNEGHYLVDTPGILSKKQMASRLTGSDLELVAPKKQLKPATYQLLPGQTIFLAGLGR 271
Query: 505 LDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKD 564
+D + T++ + ++ LH K NADE + H L PP D +LG K
Sbjct: 272 IDFIKGPASGF--TIYVARDLYLHRTKTINADEFYLKHKSDLLNPPCDSD---DLGALKG 326
Query: 565 RKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ S S DI G+G+ + + + +T +GI + +R L+
Sbjct: 327 QLYSTSEKS------DILFGGVGFIT--VPSGVVIKAYTPEGIGLGIRRALI 370
>gi|116333668|ref|YP_795195.1| GTP-binding protein YqeH [Lactobacillus brevis ATCC 367]
gi|116099015|gb|ABJ64164.1| Predicted GTPase [Lactobacillus brevis ATCC 367]
Length = 380
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 183/377 (48%), Gaps = 43/377 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
EK EV C RC LR+Y NE+ + D DF L+ +ANA ++V VVD
Sbjct: 46 EKQEV-YCQRCFRLRHY----NEIVPVGLTDDDF-----LNLLTQIQDANA-LIVYVVDI 94
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G S+ L D + +LVG K DLLP + ++L W+R
Sbjct: 95 FDFNG--------SVIPGLHRFVGDNPI-------LLVGNKEDLLPRSLRRSKLRDWLRQ 139
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
RA G ++ V L+SA+ + V LL I + G R +V+V+G N GKSTLIN +
Sbjct: 140 RANEAGLRPID-VTLLSAKTNQSVDGLLQLIDKYRGDR-DVYVVGVTNVGKSTLINQIIR 197
Query: 421 KE-GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
+ GVK +T + PGTTL + + L L DTPG++ M+ L + K+V
Sbjct: 198 QNTGVK-DLITTSKFPGTTLDKIELP--LDDDHVLVDTPGIIQNQQMAHFLTGKDLKIVT 254
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+K+++P+ Y++ Q + +GG+ R D ++ T + N+ +H K+ENAD+ +
Sbjct: 255 PQKQVKPKNYQLNDQQTLFLGGVARFDFNKGPKSGF--TAYFENNLYIHRTKLENADDFY 312
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+G L PP D+ + + K + S D+ GLGW + + ++
Sbjct: 313 ARQLGQLLTPPQAVDK-DDFPPLVAHEFKTTAKS------DLVFEGLGWIT--VPAGINV 363
Query: 600 TLWTYDGIEITLREPLV 616
T W G+ + +R ++
Sbjct: 364 TGWAPAGVGVLIRHAMI 380
>gi|340354705|ref|ZP_08677406.1| GTP-binding protein [Sporosarcina newyorkensis 2681]
gi|339623104|gb|EGQ27610.1| GTP-binding protein [Sporosarcina newyorkensis 2681]
Length = 371
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 179/376 (47%), Gaps = 44/376 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC LRNY NE+ + DF ++ G + G++V VVD DF
Sbjct: 37 EDVICQRCFKLRNY----NELQPVSLSGDDF-----LAILNGIGEKD-GLIVKVVDIFDF 86
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + KK ++L+G K D+LP ++P R+ W++ A
Sbjct: 87 NGSWINGLHRFVGKK---------------DILLIGNKSDILPKSINPKRVTNWMKAEAA 131
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V LVSA K G+ L I+ + +V+V+G N GKST IN K
Sbjct: 132 KLGLKPID-VLLVSAVKGTGMSEALDAIETYRKGK-DVYVVGCTNVGKSTFINRIIKDAT 189
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+T + PGTTL ++ I L L DTPG+++ H ++ L+ + K++ +KE
Sbjct: 190 GVQDVITTSYFPGTTLDVVEIP--LDDGKSLMDTPGIINDHQIAHDLDAKDLKLITPKKE 247
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDL---DQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
L+P+ Y++ Q + +GGL R D D++S ++ + + LH K+ENADE++
Sbjct: 248 LKPKVYQLNAEQTLFIGGLARFDFIAGDRSSFN-----IYVANGLPLHRTKLENADELYL 302
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
NH+G L PP S K L S D+ +GLGW ++ + +
Sbjct: 303 NHLGDMLSPP------SAASLEKLPPLVRHEFSIKEAKTDVVISGLGWITIQ-HADVQVA 355
Query: 601 LWTYDGIEITLREPLV 616
+ G+ + +R L+
Sbjct: 356 VHAPKGVNVIIRPSLI 371
>gi|423521806|ref|ZP_17498279.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA4-10]
gi|401176468|gb|EJQ83663.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA4-10]
Length = 368
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 181/378 (47%), Gaps = 47/378 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGQSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEHYREGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + LYDTPG+++ H M+ + + K++
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDETSSLYDTPGIINHHQMAHYVGKQSLKLITPTT 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GGL R D T S +++H K+E ADE+++ H
Sbjct: 244 EVKPMVFQLNEEQTLFFGGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYERH 301
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN----GIDIAAAGLGWFSLGLKGEAS 598
G L PP ++ + G K ++ N D+ +GLGW ++ G A
Sbjct: 302 AGELLNPPTPEELENMPGFVK----------YEFNIREPKTDVVFSGLGWVTVNESG-AK 350
Query: 599 LTLWTYDGIEITLREPLV 616
+ G+ ++LR+ L+
Sbjct: 351 IVAHVPKGVSVSLRKSLI 368
>gi|225859501|ref|YP_002741011.1| GTP-binding protein YqeH [Streptococcus pneumoniae 70585]
gi|225722019|gb|ACO17873.1| GTP-binding protein [Streptococcus pneumoniae 70585]
Length = 368
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 186/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y N++ + + + DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NKITDVQLTNDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R +V+V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|315653638|ref|ZP_07906558.1| GTP-binding protein [Lactobacillus iners ATCC 55195]
gi|315489000|gb|EFU78642.1| GTP-binding protein [Lactobacillus iners ATCC 55195]
Length = 370
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 190/412 (46%), Gaps = 53/412 (12%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G+I ++ K KLS + +E C RC LR+Y ++ V EN
Sbjct: 9 IGCGSILQD-----KDSKLSGYMPHSAFNKMIQEPDTSVYCQRCFRLRHYNEI-TPVNEN 62
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ DF RL+ GN A ++V VVD DF+ SL L+ + +
Sbjct: 63 ---NDDF-----LRLLNSLGNKKA-LIVNVVDLFDFNN--------SLITSLDRFIGNNE 105
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA-PKLNGVYLVSARKDLGVRN 386
VLVG KVDL P +++ W+R A G PK ++L+SA K RN
Sbjct: 106 F-------VLVGNKVDLFPKNSKESKIKDWMRQEANRNGLFPK--KIFLLSAIKK---RN 153
Query: 387 LLAFIKELA--GPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRI 444
+ I LA G +++ +G N GKSTLIN + + +T + PGTTL ++I
Sbjct: 154 IDELINYLATKGKNEDIYFVGTTNVGKSTLINAIIETRSEYKNLITTSKFPGTTLDSIKI 213
Query: 445 GGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMR 504
L L DTPG+L M+ RL E ++V +K+L+P TY++ GQ + + GL R
Sbjct: 214 P--LNEGHYLVDTPGILSKKQMASRLTGSELELVAPKKQLKPATYQLLPGQTIFLAGLGR 271
Query: 505 LDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKD 564
+D + T++ + ++ LH K NADE + H L PP D +LG K
Sbjct: 272 IDFIKGPASGF--TIYVARDLYLHRTKTINADEFYLKHKSDLLNPPCDSD---DLGALKG 326
Query: 565 RKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ S S DI G+G+ + + + +T +GI + +R L+
Sbjct: 327 QLYSTSEKS------DILFGGVGFIT--VPSGVVIKAYTPEGIGLGIRRALI 370
>gi|62719448|gb|AAX93324.1| GTPase [Lactobacillus sanfranciscensis]
Length = 377
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 186/383 (48%), Gaps = 43/383 (11%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
K A E E GE+ C RC LR+Y NE+ + D +F L+ G+ ++
Sbjct: 37 KSAIEKGLESGEL-YCQRCFRLRHY----NEIQPVDVSDDEF-----LHLLGKIGDTDS- 85
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV VVD D +G S+ ++ + P LV VG KVDLLPS +
Sbjct: 86 LVVYVVDIFDVNG--------SIIPGIQ------RFVGNNPILV-VGNKVDLLPSSFKES 130
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
++ W+R G ++ + LVSA+ + V +LL IK+ R +V+V+G N GKS
Sbjct: 131 KIKDWLRQMMNKAGIKPID-IELVSAKTNRSVDDLLEVIKKYQKNR-DVYVVGVTNVGKS 188
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN + + +T + PGTTL +++I L L DTPG++H M+ L+
Sbjct: 189 TLINQIIHQASGQEQVITTSKFPGTTLDMIKIP--LDDGHDLIDTPGVIHASQMAHYLSP 246
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K V +K ++P+ Y++ GQ + +G + R D + TV N+ +H K
Sbjct: 247 KDLKYVSPQKRIKPKVYQLNDGQTLFLGAIGRFDYVKGPKTGF--TVNVDNNLMIHRTKT 304
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
ENADE N G L P+G++ L + + KV TS D+ GLGW ++
Sbjct: 305 ENADEFLINMPGEXLNXPLGKENVVPL---QRHEFKVEDTS------DLVIEGLGWVTVP 355
Query: 593 LKGEASLTLWTYDGIEITLREPL 615
KG + + W G+ + +R+ +
Sbjct: 356 -KG-SIIAGWAPKGVSVLIRKAM 376
>gi|225855180|ref|YP_002736692.1| GTP-binding protein YqeH [Streptococcus pneumoniae JJA]
gi|225723024|gb|ACO18877.1| GTP-binding protein [Streptococcus pneumoniae JJA]
Length = 368
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 185/396 (46%), Gaps = 65/396 (16%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E GEV C RC LR+Y NE+ + + + DF +L+ G+++A
Sbjct: 26 QSALEKGLETGEV-YCQRCFRLRHY----NEITDVQLTNDDF-----LKLLHEVGDSDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ V LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFVSGNDVLLVGNKKDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ ++ ++ I+ R + +V+G
Sbjct: 114 KSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHTIKEVIDKIEHYRKGR-DAYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKSTLIN ++ + +T + PGTTL + I L + +YDTPG++H H M
Sbjct: 172 TNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQM 229
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ L K V +KE++P+TY++ Q + +GGL R D + T + +
Sbjct: 230 AHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELK 287
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLKVSGTSWDVNGID 580
LH K+E A + H+G L PP +++ + T KD+ D
Sbjct: 288 LHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-------------D 334
Query: 581 IAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 335 LVISGLGW--IRVTGIAKVAVWAPEGVAVVTRKAII 368
>gi|312110147|ref|YP_003988463.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y4.1MC1]
gi|311215248|gb|ADP73852.1| ribosome biogenesis GTPase YqeH [Geobacillus sp. Y4.1MC1]
Length = 367
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 189/382 (49%), Gaps = 51/382 (13%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
EK EV +C RC L++Y NEV + + D DF +++ G + A +VV +VD
Sbjct: 31 EKEEV-ICQRCFRLKHY----NEVQDVELTDDDF-----LKILHSIGQSEA-LVVKIVDI 79
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G + + + ++LVG K DLLP V T+L W+
Sbjct: 80 FDFNGSWLPGLHRFVANN---------------PILLVGNKADLLPKSVKYTKLIHWMAQ 124
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
A G ++ + LVSA K +G+ + I++ + NV+V+G N GKST IN +
Sbjct: 125 MANDLGLKPVD-ICLVSAVKGIGIAKAMEAIEKHRLGK-NVYVVGCTNVGKSTFINRIIQ 182
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ K + +T + PGTTL I+ I L A LYDTPG+++ H M+ +++ + K++
Sbjct: 183 ETTGKGNVITTSYFPGTTLDIIEIP--LDDGAALYDTPGIINHHQMAHFVDKKDLKIITP 240
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
++E+ P+ Y++ Q + GGL RLD + + +V +A+ + +H K+E AD ++
Sbjct: 241 KREIHPKVYQLNEQQTLFFGGLARLDYIKGGRRS-FVCYFAN-ELPIHRTKLEKADALYA 298
Query: 541 NHVGIRLQPP----IGQ--DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
G L PP I Q + T K+RK DI +GLGW +
Sbjct: 299 KQFGELLSPPSKHYIDQFPPLVAHTFTIKERK------------TDIVFSGLGWVTCNEP 346
Query: 595 GEASLTLWTYDGIEITLREPLV 616
G A + + G++I +R+ L+
Sbjct: 347 G-AQVVAYAPKGVDILIRKSLI 367
>gi|423558081|ref|ZP_17534383.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MC67]
gi|401191349|gb|EJQ98371.1| ribosome biogenesis GTPase YqeH [Bacillus cereus MC67]
Length = 368
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 180/378 (47%), Gaps = 47/378 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGQSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGITELADAIEHYREGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + LYDTPG+++ H M+ + + K++
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDETSSLYDTPGIINHHQMAHYVGKQSLKLITPTT 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GGL R D T S +++H K+E ADE+++ H
Sbjct: 244 EVKPMVFQLNEEQTLFFGGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYERH 301
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN----GIDIAAAGLGWFSLGLKGEAS 598
G L PP + EL D ++ N D+ +GLGW ++ G A
Sbjct: 302 AGEMLNPPTPE----ELENMPDF------VKYEFNIREPKTDVVFSGLGWVTVNESG-AK 350
Query: 599 LTLWTYDGIEITLREPLV 616
+ G+ ++LR+ L+
Sbjct: 351 IVAHVPKGVSVSLRKSLI 368
>gi|381210423|ref|ZP_09917494.1| GTPase YqeH [Lentibacillus sp. Grbi]
Length = 366
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 183/373 (49%), Gaps = 38/373 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
++ +C RC L++Y N++ + + D DF ++ K G+VV +VD +
Sbjct: 32 DIILCKRCFRLKHY----NDIQDVSMTDDDFLEMVGQIKDK------EGLVVHLVDIFNV 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
DG ++ K L D + +L K+DLLP + +L +W+R AK
Sbjct: 82 DG--------TMIKGLSSIVGDKPV-------ILAANKMDLLPKSTNRNKLIKWLRTMAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + VYL+S+ K G+ +L I E + +V+++G N GKST IN ++
Sbjct: 127 EAGI-SVKAVYLISSVKGHGLSDLSEAI-EAKRQKQSVYIVGTANVGKSTFINKLIQETT 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+T + PGTTLG + I L L DTPG+++ + ++ ++ ++ K++ +KE
Sbjct: 185 GTTDVITTSYFPGTTLGFIEIP--LDDNTSLIDTPGIVNRNQIAHYISDNDLKIITPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++PR Y++ Q ++ GGL RLD + ++ + S +S+H K++NAD + H+
Sbjct: 243 VKPRVYQLNNQQTLYFGGLARLDFIKGERQSF--VCYFSNQLSIHRTKLKNADHLLSEHM 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP + E+ L + DI GLGW ++ KG+ ++ + +
Sbjct: 301 GGLLSPP--DNETIEMMP----DLTAHSYQIEQEKTDIVFPGLGWVTIP-KGDITVAVHS 353
Query: 604 YDGIEITLREPLV 616
+ + I+LR +
Sbjct: 354 PENVRISLRRSFM 366
>gi|30022413|ref|NP_834044.1| GTP-binding protein YqeH [Bacillus cereus ATCC 14579]
gi|29897971|gb|AAP11245.1| GTP-binding protein [Bacillus cereus ATCC 14579]
Length = 358
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 172/348 (49%), Gaps = 42/348 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGKSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ G + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + + K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKQSLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 244 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 301
Query: 543 VGIRLQPPIGQDRAS--ELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
G L PP ++ A+ EL + + ++ T D+ GLGW
Sbjct: 302 AGDLLSPPTPEELANMPELVKY-EFNIREPKT-------DVVFFGLGW 341
>gi|313884889|ref|ZP_07818641.1| ribosome biogenesis GTPase YqeH [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619580|gb|EFR31017.1| ribosome biogenesis GTPase YqeH [Eremococcus coleocola
ACS-139-V-Col8]
Length = 375
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 175/384 (45%), Gaps = 42/384 (10%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E KGE C RC LR+Y +++N FD + G
Sbjct: 34 QSAYEKGLTKGEF-YCQRCFRLRHYNEIQN---------FDVSEYFFLEQLDKIGQDEEA 83
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
V +VD D +G SL L + + P +LV K+DLLP V
Sbjct: 84 FVFHLVDIFDLEG--------SLLTGLN------RFTGNKP-FILVANKIDLLPKSVKLG 128
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
R+ W+ R A V L+SA+K + L+ I++ N++ +G N GKS
Sbjct: 129 RIQSWLTQRFHALDLYP-QDVILLSAKKGASLDQLIEVIQD-KIQNHNIYTVGVTNVGKS 186
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
++IN K G + +T + +PGTTL + + L L DTPG++ ++ L+R
Sbjct: 187 SVINHVLKDLGEADNLITTSAMPGTTLEFIELP--LTEDHALIDTPGIIRSQQITHYLDR 244
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ K+V K ++PR++++ GQ + GL RLD ++ + T + S N+ LH K
Sbjct: 245 EGIKVVLPDKMIKPRSFQLDSGQTIFFAGLGRLDFERGDKTSF--TFYVSNNLLLHRTKT 302
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
E AD++ +H G L PP +D +L +K +++ D+A AGLGW ++
Sbjct: 303 EKADQLLADHQGQLLSPPQAKD---QLPAFKTYHIQLQANQ------DLAIAGLGWVTVN 353
Query: 593 LKGEASLTLWTYDGIEITLREPLV 616
SL+L G+ +R ++
Sbjct: 354 --QAVSLSLQLPQGVTYAVRPAMI 375
>gi|323339581|ref|ZP_08079855.1| GTP-binding protein [Lactobacillus ruminis ATCC 25644]
gi|347525535|ref|YP_004832283.1| GTP-binding protein YqeH [Lactobacillus ruminis ATCC 27782]
gi|417973879|ref|ZP_12614713.1| GTPase YqeH [Lactobacillus ruminis ATCC 25644]
gi|323092976|gb|EFZ35574.1| GTP-binding protein [Lactobacillus ruminis ATCC 25644]
gi|345284494|gb|AEN78347.1| GTP-binding protein YqeH [Lactobacillus ruminis ATCC 27782]
gi|346329750|gb|EGX98035.1| GTPase YqeH [Lactobacillus ruminis ATCC 25644]
Length = 372
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 174/369 (47%), Gaps = 40/369 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE A+ + D DF L+ G ++A ++V VVD DF G
Sbjct: 44 CKRCFRLRHY----NETADVSLTDDDF-----LALLNQIGESDA-LIVNVVDIFDFSG-- 91
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
S+ L + + ++VG K DLLP + +++ W+R A A G
Sbjct: 92 ------SIIPGLHRFVGNNPI-------LMVGNKEDLLPRSLKRSKIRDWLRQSANAQGL 138
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
+ V L SA K + L+ I + R +V+V+G N GKSTLIN K +
Sbjct: 139 RPVE-VCLTSASKGHEIDRLMELIDKYREGR-DVYVVGVTNVGKSTLINQIIKHQTGISD 196
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL RI L DTPG++H M+ L+ E ++ +KE++P+
Sbjct: 197 LITTSRFPGTTLD--RIEIPFGDGRFLIDTPGIIHKDQMAHYLSPKELRLASPQKEIKPK 254
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
Y++ GQ + +G L R D S E V V+ N+ +H K ENA ++ H G L
Sbjct: 255 VYQLNEGQTLFLGALARFDY--VSGEKQGVVVYLDNNLMIHRTKTENASAFYEKHAGKLL 312
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
PP ++ + KV+ S D+ AGLGW S +K + + W +G+
Sbjct: 313 NPP-SEEEMKTFPKLVRFEFKVTEKS------DLVFAGLGWIS--VKAGSIVAGWAPEGV 363
Query: 608 EITLREPLV 616
+ LR+ ++
Sbjct: 364 SVVLRKAMI 372
>gi|341821188|emb|CCC57532.1| GTP-binding protein [Weissella thailandensis fsh4-2]
Length = 380
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 178/377 (47%), Gaps = 42/377 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E EV C RC LR+Y NE+ + D DF RL++ + N+ +VV V+D
Sbjct: 45 ENDEV-FCQRCFRLRHY----NEIQPVNLTDDDF-----RRLLEQIADTNS-LVVYVMDV 93
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF G SL L + + +LVG KVD+LP + T++ W+R
Sbjct: 94 FDFSG--------SLIPGLHRFVGNNDV-------LLVGNKVDVLPRSLKRTKIKDWMRQ 138
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
+A G L+ V L S + + +LL I++ R +V+V+G N GKSTLIN K
Sbjct: 139 QANIAGLRPLD-VALTSGKNGDAIAHLLDLIEKYRHGR-SVYVVGVTNVGKSTLINQIIK 196
Query: 421 K-EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
+ G + +T + PGTTL RI L ++ + DTPG++H M+ L+ + K V
Sbjct: 197 EVTGDRDDVITTSRFPGTTLD--RIEIPLDDESNIVDTPGIIHQDQMAHYLSAADLKYVS 254
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++P T+++ GQ + +G L R D Q I T + N+ +H K+ NAD +
Sbjct: 255 PQKEIKPTTFQLNAGQTLFMGALARFDYIQGDRAGI--TAYFENNLLIHRTKLANADNFY 312
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
H G L PP EL + + K + DI GLGW + + + +
Sbjct: 313 DKHAGDLLAPPTAAG-LDELPPLQRHEFKT------IVKTDIVIDGLGWIT--VPADTVV 363
Query: 600 TLWTYDGIEITLREPLV 616
W G+ + R ++
Sbjct: 364 AGWAPKGVSVLTRRAMI 380
>gi|354582184|ref|ZP_09001086.1| ribosome biogenesis GTPase YqeH [Paenibacillus lactis 154]
gi|353199583|gb|EHB65045.1| ribosome biogenesis GTPase YqeH [Paenibacillus lactis 154]
Length = 374
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 178/371 (47%), Gaps = 36/371 (9%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
+C RC ++NY NE + + +F RL+ G NA +V+ +VD DF+G
Sbjct: 40 VICQRCFRIKNY----NEASSVAVDQDEF-----LRLLGQIGGKNA-LVIHIVDLFDFEG 89
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
SL L+ + + +L K DLLP + ++ WV+ + K
Sbjct: 90 --------SLISGLQRFVGNNPV-------ILAVNKTDLLPKVTNWNKVLNWVQKQCKEH 134
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G K + L SA+K+ G LL + G R +V+V+GA N GKS+LIN +
Sbjct: 135 GL-KTEDIVLCSAKKNQGFERLLETVAYHRGDR-DVYVVGATNVGKSSLINRLIRDYSDL 192
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
+LT + PGTTL ++ I L + DTPG+++P S ++R++ + V L+
Sbjct: 193 EQELTTSRYPGTTLDMVHIP--LDDGRDIIDTPGIVYPWRYSEIVSREDLREVMPENPLK 250
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P Y++ GQ + GG R D Q ++ T + S +++H K+E AD +++ H G
Sbjct: 251 PAVYQLNEGQTLFFGGFARFDFVQGVHQSF--TCFISGRLNIHRTKLERADTLFEEHAGE 308
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
L PP +DR +EL W ++++ S D+ +GLGW + A + +
Sbjct: 309 LLSPPT-RDRLAELPEWTRHEIRIPKGS----RTDVFISGLGWIKVNGDQGALVAVHAPK 363
Query: 606 GIEITLREPLV 616
G+++ R L+
Sbjct: 364 GVKVLARPSLI 374
>gi|227877772|ref|ZP_03995805.1| GTP-binding protein [Lactobacillus crispatus JV-V01]
gi|256843623|ref|ZP_05549111.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus 125-2-CHN]
gi|256850099|ref|ZP_05555529.1| GTP-binding protein YqeH [Lactobacillus crispatus MV-1A-US]
gi|262047387|ref|ZP_06020344.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus MV-3A-US]
gi|293380732|ref|ZP_06626780.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus 214-1]
gi|423319186|ref|ZP_17297062.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus FB049-03]
gi|423320732|ref|ZP_17298604.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus FB077-07]
gi|227862631|gb|EEJ70117.1| GTP-binding protein [Lactobacillus crispatus JV-V01]
gi|256615043|gb|EEU20244.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus 125-2-CHN]
gi|256713071|gb|EEU28062.1| GTP-binding protein YqeH [Lactobacillus crispatus MV-1A-US]
gi|260572361|gb|EEX28924.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus MV-3A-US]
gi|290922696|gb|EFD99650.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus 214-1]
gi|405589995|gb|EKB63534.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus FB049-03]
gi|405600001|gb|EKB73174.1| ribosome biogenesis GTPase YqeH [Lactobacillus crispatus FB077-07]
Length = 369
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 186/381 (48%), Gaps = 44/381 (11%)
Query: 237 EAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVM 296
+A++E+ C RC LR+Y ++ + D + D +A L+ G A ++V
Sbjct: 32 KAKQEENADVYCQRCFRLRHYNEI-------MPVDLNNDDFLA--LLNSLGQKKA-LIVN 81
Query: 297 VVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR 356
VVD DF + SL L+ + +LVG K DL P +++
Sbjct: 82 VVDLFDF--------SNSLLSSLKRFVGNNDF-------ILVGNKFDLFPKNSKQSKIKD 126
Query: 357 WVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLI 415
W+R A + G PK ++LVSA+K L + +L+A+I + + + +V+ +G N GKSTLI
Sbjct: 127 WMRQEANRMGLYPK--EIFLVSAKKKLNLEDLIAYINKQSQDK-DVYFVGTTNVGKSTLI 183
Query: 416 NTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQ 475
N G +T + PGTTL + I L L DTPG++ + ++ LN +
Sbjct: 184 NAIIDMMGDIQDLITASRFPGTTLDKIEIP--LENGHFLIDTPGIMTENQLATHLNAKDL 241
Query: 476 KMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENA 535
++V +K L+P TY++ G + + GL R+D + E+ TV+ + + +H K NA
Sbjct: 242 ELVSPKKPLKPATYQLLPGNTLFLAGLGRIDYLKG--ESTSFTVYVARGMYIHRTKTANA 299
Query: 536 DEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKG 595
D+ +K H G L PP D E+ K ++ + S D+ G+G+ ++ KG
Sbjct: 300 DDFYKKHKGELLSPPAADD---EMAPLKGQEFRTEYKS------DLLFGGIGFVTVP-KG 349
Query: 596 EASLTLWTYDGIEITLREPLV 616
T +T DGI + +R L+
Sbjct: 350 CVVKT-YTPDGIGLGIRRALI 369
>gi|335996450|ref|ZP_08562367.1| GTP-binding protein [Lactobacillus ruminis SPM0211]
gi|335351520|gb|EGM53011.1| GTP-binding protein [Lactobacillus ruminis SPM0211]
Length = 372
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 174/369 (47%), Gaps = 40/369 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE A+ + D DF L+ G ++A ++V VVD DF G
Sbjct: 44 CKRCFRLRHY----NETADVSLTDDDF-----LALLNQIGESDA-LIVNVVDIFDFSG-- 91
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
S+ L + + ++VG K DLLP + +++ W+R A A G
Sbjct: 92 ------SIIPGLHRFVGNNPI-------LMVGNKEDLLPRSLKRSKIRDWLRQSANAQGL 138
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
+ V L SA K + L+ I + R +V+V+G N GKSTLIN K +
Sbjct: 139 RPVE-VCLTSASKGHEIDCLMELIDKYREGR-DVYVVGVTNVGKSTLINQIIKHQTGISD 196
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL RI L DTPG++H M+ L+ E ++ +KE++P+
Sbjct: 197 LITTSRFPGTTLD--RIEIPFGDGRFLIDTPGIIHKDQMAHYLSPKELRLASPQKEIKPK 254
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
Y++ GQ + +G L R D S E V V+ N+ +H K ENA ++ H G L
Sbjct: 255 VYQLNEGQTLFLGALARFDY--VSGEKQGVVVYLDNNLMIHRTKTENASAFYEKHAGKLL 312
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
PP ++ + KV+ S D+ AGLGW S +K + + W +G+
Sbjct: 313 NPP-SEEEMKTFPKLVRFEFKVTEKS------DLVFAGLGWIS--VKAGSIVAGWAPEGV 363
Query: 608 EITLREPLV 616
+ LR+ ++
Sbjct: 364 SVVLRKAMI 372
>gi|365157946|ref|ZP_09354190.1| ribosome biogenesis GTPase YqeH [Bacillus smithii 7_3_47FAA]
gi|363622356|gb|EHL73522.1| ribosome biogenesis GTPase YqeH [Bacillus smithii 7_3_47FAA]
Length = 368
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 183/380 (48%), Gaps = 52/380 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E VC RC L++Y NE+ + + D DF +++ T ++V +VD DF
Sbjct: 34 EQVVCQRCFRLKHY----NEIQDVSLTDDDFLKILHTL------GETKSLIVKIVDIFDF 83
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLPSQVSPTRLDRW 357
+G + LP+ V L+G K DLLP + RL W
Sbjct: 84 NGSW---------------------LPGLPRFVGNNPVLLIGNKEDLLPKSLKRERLINW 122
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
++ A+ G ++ V LVSA K +R + I+ + +V+V+G N GKST IN
Sbjct: 123 MKKEAEKLGLRPID-VILVSASKGHFIREAMEMIEHYRAGK-DVYVVGCTNVGKSTFINR 180
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
K+ G +T + PGTTL + I L + L DTPG+++ H M+ +++ + K+
Sbjct: 181 ILKESGESGELITTSHFPGTTLDKIEIP--LEDGSALIDTPGIINHHQMAHFVDKRDLKI 238
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPN-VSLHLGKIENAD 536
+ +KE++P+ Y++ Q + GGL RLD + ++ V PN + +H K+E AD
Sbjct: 239 IMPKKEIKPKVYQLNEKQTLFFGGLSRLDYLKGGRRSL---VCYMPNELQIHRTKLEKAD 295
Query: 537 EIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
+++ HVG L PP +++ + + K++ DI +GLGW ++ G
Sbjct: 296 SLYEKHVGEMLVPP-REEQLDDFPPLIRHEFKITDAK-----TDIVFSGLGWVTVHEPG- 348
Query: 597 ASLTLWTYDGIEITLREPLV 616
A + + G+ + +R+ L+
Sbjct: 349 AVVAAYVPKGVSVLIRKSLI 368
>gi|423452361|ref|ZP_17429214.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5X1-1]
gi|423470557|ref|ZP_17447301.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6O-2]
gi|401139999|gb|EJQ47556.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG5X1-1]
gi|402436223|gb|EJV68255.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6O-2]
Length = 368
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 179/374 (47%), Gaps = 39/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGQSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGITELADAIEHYREGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + LYDTPG+++ H M+ + + K++
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDETSSLYDTPGIINHHQMAHYVGKQSLKLITPTT 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GGL R D T S +++H K+E ADE+++ H
Sbjct: 244 EVKPMVFQLNEEQTLFFGGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYERH 301
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP ++ + + + + DV +GLGW ++ G A +
Sbjct: 302 AGELLNPPTPEE-LENMPEFVKYEFNIREPKTDV-----VFSGLGWVTVNESG-AKIVAH 354
Query: 603 TYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 355 VPKGVSVSLRKSLI 368
>gi|227892823|ref|ZP_04010628.1| GTP-binding protein [Lactobacillus ultunensis DSM 16047]
gi|227865325|gb|EEJ72746.1| GTP-binding protein [Lactobacillus ultunensis DSM 16047]
Length = 369
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 188/388 (48%), Gaps = 48/388 (12%)
Query: 232 KKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA 291
K +A+ E+ C RC LR+Y ++ + D + D +A + S +
Sbjct: 27 KSALEKAKNEENTDVYCQRCFRLRHYNEI-------MPVDLNNDDFLA---LLNSLSEKK 76
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEE--AKDDAKLSKKLPKLVLVGTKVDLLPSQV 349
+VV VVD DF + SL L+ K+D +LVG K DL P
Sbjct: 77 ALVVNVVDLFDF--------SNSLLSSLKRFVGKND---------FILVGNKFDLFPKNS 119
Query: 350 SPTRLDRWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
+++ W+R +A + G PK ++LVSA+K L + L+A+I + + + +V+ +G N
Sbjct: 120 KQSKIKDWMRQKANRMGLFPK--EIFLVSAKKKLNLEKLIAYINKQSQDK-DVYFVGTTN 176
Query: 409 AGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSM 468
GKSTLIN G +T + PGTTL + I L + L DTPG++ + ++
Sbjct: 177 VGKSTLINAIIDMMGDIQDLITTSRFPGTTLDQIEIP--LDSGHFLIDTPGIMTDNQLAT 234
Query: 469 RLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLH 528
LN + +++ +K L+P TY++ G + + GL R+D + E+ TV+ + + +H
Sbjct: 235 HLNAKDLELISPKKPLKPATYQLLPGNTLFLAGLGRIDYLKG--ESTSFTVYVARGMYVH 292
Query: 529 LGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
K NAD ++ H G L PP D E+ + K ++ K S D+ G+G+
Sbjct: 293 RTKTTNADAFYEKHKGELLAPPAKDD---EMASLKGQEFKTEYKS------DLLFGGIGF 343
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPLV 616
++ KG T +T DGI + +R L+
Sbjct: 344 VTVP-KGCVVKT-YTPDGIGLGIRRALI 369
>gi|251798007|ref|YP_003012738.1| nitric-oxide synthase [Paenibacillus sp. JDR-2]
gi|247545633|gb|ACT02652.1| Nitric-oxide synthase [Paenibacillus sp. JDR-2]
Length = 374
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 184/373 (49%), Gaps = 36/373 (9%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC +RNY NE + + DF RL+ G+ ++ +VV +VD DF
Sbjct: 38 EPVICQRCFRIRNY----NEASSITVDQDDF-----LRLLGSIGSTDS-LVVHIVDLFDF 87
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G SL L+ + + VLV KVDLLP V+ RL WV+ +AK
Sbjct: 88 EG--------SLISGLQRFVGNNPV-------VLVVNKVDLLPRSVNLNRLRNWVQKQAK 132
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
A G ++ + L SA++++G +++ I+ R +V+V+GA N GKSTLIN
Sbjct: 133 AEGLRTVD-IVLCSAKRNIGFEHVIEAIERHRKDR-DVYVVGATNVGKSTLINRLIHDYS 190
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+LT + PGTTL + I L + DTPG+++P M+ + R + + K
Sbjct: 191 DMERELTTSRYPGTTLDAVHIP--LDDGKSIIDTPGIVYPTRMTEIVPRGFLQALLPDKP 248
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P Y++ Q++ + L+R D + ++ T + S + +H K+E A+E++ +H
Sbjct: 249 IKPLVYQLNDQQSLFINSLVRFDFVEGERQSF--TFYISNALHVHRTKLERAEELYADHR 306
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L P ++ E+ W +++ + DI +G+GW A + ++
Sbjct: 307 GELLGGP-SREELDEMPAWTRHSIRIPRGAKK----DIFVSGMGWIQANGTSGAIVDIYA 361
Query: 604 YDGIEITLREPLV 616
GI++ LR+ LV
Sbjct: 362 PKGIKVLLRDSLV 374
>gi|163942091|ref|YP_001646975.1| GTP-binding protein YqeH [Bacillus weihenstephanensis KBAB4]
gi|229013556|ref|ZP_04170689.1| hypothetical protein bmyco0001_39650 [Bacillus mycoides DSM 2048]
gi|229062034|ref|ZP_04199359.1| hypothetical protein bcere0026_41060 [Bacillus cereus AH603]
gi|229135161|ref|ZP_04263961.1| hypothetical protein bcere0014_40630 [Bacillus cereus BDRD-ST196]
gi|229169083|ref|ZP_04296798.1| hypothetical protein bcere0007_40350 [Bacillus cereus AH621]
gi|423368386|ref|ZP_17345818.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD142]
gi|423489519|ref|ZP_17466201.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BtB2-4]
gi|423495242|ref|ZP_17471886.1| ribosome biogenesis GTPase YqeH [Bacillus cereus CER057]
gi|423497964|ref|ZP_17474581.1| ribosome biogenesis GTPase YqeH [Bacillus cereus CER074]
gi|423512449|ref|ZP_17488980.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA2-1]
gi|423519035|ref|ZP_17495516.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA2-4]
gi|423591669|ref|ZP_17567700.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD048]
gi|423660820|ref|ZP_17635989.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM022]
gi|423669921|ref|ZP_17644950.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM034]
gi|423673875|ref|ZP_17648814.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM062]
gi|163864288|gb|ABY45347.1| Nitric-oxide synthase [Bacillus weihenstephanensis KBAB4]
gi|228614311|gb|EEK71421.1| hypothetical protein bcere0007_40350 [Bacillus cereus AH621]
gi|228648289|gb|EEL04324.1| hypothetical protein bcere0014_40630 [Bacillus cereus BDRD-ST196]
gi|228717186|gb|EEL68861.1| hypothetical protein bcere0026_41060 [Bacillus cereus AH603]
gi|228747716|gb|EEL97586.1| hypothetical protein bmyco0001_39650 [Bacillus mycoides DSM 2048]
gi|401080713|gb|EJP88997.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD142]
gi|401151335|gb|EJQ58787.1| ribosome biogenesis GTPase YqeH [Bacillus cereus CER057]
gi|401160090|gb|EJQ67469.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA2-4]
gi|401161251|gb|EJQ68618.1| ribosome biogenesis GTPase YqeH [Bacillus cereus CER074]
gi|401231802|gb|EJR38304.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD048]
gi|401299048|gb|EJS04648.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM034]
gi|401300861|gb|EJS06450.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM022]
gi|401310241|gb|EJS15566.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VDM062]
gi|402431755|gb|EJV63819.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BtB2-4]
gi|402449420|gb|EJV81257.1| ribosome biogenesis GTPase YqeH [Bacillus cereus HuA2-1]
Length = 368
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 179/374 (47%), Gaps = 39/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGQSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L + K+ +LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NG--------SWLPGLHRFVGNNKV-------LLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEHYREGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + LYDTPG+++ H M+ + + K++
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDETSSLYDTPGIINHHQMAHYVGKQSLKLITPTT 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GGL R D T S +++H K+E ADE+++ H
Sbjct: 244 EVKPMVFQLNEEQTLFFGGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYEKH 301
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP ++ + + + + DV +GLGW ++ G A +
Sbjct: 302 AGELLNPPTPEE-LENMPKFVKYEFNIREPKTDV-----VFSGLGWVTVNESG-AKIVAH 354
Query: 603 TYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 355 VPKGVSVSLRKSLI 368
>gi|423483918|ref|ZP_17460608.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6X1-2]
gi|401141469|gb|EJQ49024.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG6X1-2]
Length = 368
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 178/374 (47%), Gaps = 39/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGQSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I E +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGITELADAI-EYYREGKDVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + LYDTPG+++ H M+ + + K++
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDETSSLYDTPGIINHHQMAHYVGKQSLKLITPTT 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GGL R D T S +++H K+E ADE+++ H
Sbjct: 244 EVKPMVFQLNEEQTLFFGGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYERH 301
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP ++ + + + + DV +GLGW ++ G A +
Sbjct: 302 AGELLNPPTPEE-LENMPEFVKYEFNIREPKTDV-----VFSGLGWVTVNESG-AKIVAH 354
Query: 603 TYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 355 VPKGVSVSLRKSLI 368
>gi|375088310|ref|ZP_09734650.1| ribosome biogenesis GTPase YqeH [Dolosigranulum pigrum ATCC 51524]
gi|374562348|gb|EHR33678.1| ribosome biogenesis GTPase YqeH [Dolosigranulum pigrum ATCC 51524]
Length = 372
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 181/369 (49%), Gaps = 38/369 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NEV++ + DF M + N ++V +VD +DF+G
Sbjct: 42 CKRCFRLRHY----NEVSDVELTSDDFLN------MLNNINDQRALIVNIVDIIDFNG-- 89
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
S+ +E + + P +++VG KVDLLP + + +W+ R G
Sbjct: 90 ------SVITGIE------RFAGNNP-VMIVGNKVDLLPKSLKHNHIRQWLTERVHELGL 136
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
++ + L+SA K V LL I+++ G R +V+V+G N GKSTLIN K +
Sbjct: 137 RPVD-ISLISAVKRDSVGQLLDKIEKIRGNR-DVYVVGTTNVGKSTLINQIVKLATDQRD 194
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + IPGTTLG + I L L DTPG+ M+ L+ E ++ +K ++P
Sbjct: 195 LITTSYIPGTTLGKIEIP--LDDGHVLVDTPGIFQSGQMAHVLSHKEMSIITPKKTIKPV 252
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ Q + +GG+ R D + +V V+AS + +H K+E AD +++ G
Sbjct: 253 TYQLNEKQTLFLGGVARFDYKGGAGRQSFV-VYASNALDIHRTKLEKADALYQAQKGKMF 311
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
PP+ ++ A L K K+ G S DI +GLGW + ++ G+
Sbjct: 312 TPPLPEN-AEHLPDMKQYHFKLDGPS------DIVFSGLGWVKVN-ASNVDVSGHAPKGV 363
Query: 608 EITLREPLV 616
++ +R+P++
Sbjct: 364 DVFVRKPMI 372
>gi|224476705|ref|YP_002634311.1| GTP-binding protein YqeH [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222421312|emb|CAL28126.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 366
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 177/386 (45%), Gaps = 53/386 (13%)
Query: 238 AQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMV 297
A E +C RC L+NY NEV + + DF ++ K G+VV V
Sbjct: 27 AHSLHKEDVICQRCFRLKNY----NEVQDVGMDSEDFLDLLNNLADK------KGLVVNV 76
Query: 298 VDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
D DF+G F + + K K++L K+DLLP Q++ R+ W
Sbjct: 77 CDIFDFEGSFIHALKRIVGNK---------------KVILAANKIDLLPKQINKRRVKEW 121
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
++ AK G V L+SA+K G+ LL I + +V+++G N GKSTLIN
Sbjct: 122 LKKTAKKYGLDP-EAVILLSAQKGYGIDELLEAIDKYRN-HEDVYIVGTTNVGKSTLINK 179
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
+ + +T + PGTTL ++ I L ++DTPG++ H M+ ++ E K
Sbjct: 180 LIEHSVGEKDVVTTSRFPGTTLDMIDIP--LDENTFMFDTPGIIQEHQMTHYVSDKELKQ 237
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
+ KE++ R Y++ Q + GGL R+D + + S N+++H K E AD
Sbjct: 238 IMPNKEIKQRVYQLNENQTLFFGGLARIDYVSGGKRPL--VCYFSNNLNIHRTKTEKADT 295
Query: 538 IWKNHVGIRLQPPIGQD-------RASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFS 590
+W+ +G L PP D +A L T K+++ D+ +GLG+ +
Sbjct: 296 LWQTQLGNLLTPPNHSDHFDLNDIKAVRLETGKEKR-------------DVMISGLGFIT 342
Query: 591 LGLKGEASLTLWTYDGIEITLREPLV 616
+G A + + +++ LR ++
Sbjct: 343 IG--PGAKVVVHVPKSVDVVLRNSIM 366
>gi|336234611|ref|YP_004587227.1| ribosome biogenesis GTPase YqeH [Geobacillus thermoglucosidasius
C56-YS93]
gi|423719182|ref|ZP_17693364.1| ribosome biogenesis GTPase yqeH [Geobacillus thermoglucosidans
TNO-09.020]
gi|335361466|gb|AEH47146.1| ribosome biogenesis GTPase YqeH [Geobacillus thermoglucosidasius
C56-YS93]
gi|383368085|gb|EID45360.1| ribosome biogenesis GTPase yqeH [Geobacillus thermoglucosidans
TNO-09.020]
Length = 367
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 188/382 (49%), Gaps = 51/382 (13%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
EK EV +C RC L++Y NEV + + D DF +++ G + A +VV +VD
Sbjct: 31 EKEEV-ICQRCFRLKHY----NEVQDVELTDDDF-----LKILHSIGQSEA-LVVKIVDI 79
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G + + + ++LVG K DLLP V +L W+
Sbjct: 80 FDFNGSWLPGLHRFVANN---------------PILLVGNKADLLPKSVKYPKLIHWMAQ 124
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
A G ++ + LVSA K +G+ + I++ + NV+V+G N GKST IN +
Sbjct: 125 MANDLGLKPVD-ICLVSAVKGIGIAKAMEAIEKHRLGK-NVYVVGCTNVGKSTFINRIIQ 182
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+ K + +T + PGTTL I+ I L A LYDTPG+++ H M+ +++ + K++
Sbjct: 183 ETTGKGNVITTSYFPGTTLDIIEIP--LDDGAALYDTPGIINHHQMAHFVDKKDLKIITP 240
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
++E+ P+ Y++ Q + GGL RLD + + +V +A+ + +H K+E AD ++
Sbjct: 241 KREIHPKVYQLNEQQTLFFGGLARLDYIKGGRRS-FVCYFAN-ELPIHRTKLEKADALYA 298
Query: 541 NHVGIRLQPP----IGQ--DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
G L PP I Q + T K+RK DI +GLGW +
Sbjct: 299 KQFGELLSPPSKHYIDQFPPLVAHTFTIKERK------------TDIVFSGLGWVTCNEP 346
Query: 595 GEASLTLWTYDGIEITLREPLV 616
G A + + G++I +R+ L+
Sbjct: 347 G-AQVVAYAPKGVDILIRKSLI 367
>gi|229019560|ref|ZP_04176376.1| hypothetical protein bcere0030_40630 [Bacillus cereus AH1273]
gi|229025801|ref|ZP_04182200.1| hypothetical protein bcere0029_40920 [Bacillus cereus AH1272]
gi|423389347|ref|ZP_17366573.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1X1-3]
gi|423417740|ref|ZP_17394829.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3X2-1]
gi|228735509|gb|EEL86105.1| hypothetical protein bcere0029_40920 [Bacillus cereus AH1272]
gi|228741726|gb|EEL91910.1| hypothetical protein bcere0030_40630 [Bacillus cereus AH1273]
gi|401106911|gb|EJQ14868.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG3X2-1]
gi|401641438|gb|EJS59155.1| ribosome biogenesis GTPase YqeH [Bacillus cereus BAG1X1-3]
Length = 368
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 179/374 (47%), Gaps = 39/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGQSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I E +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGITELADAI-EYYREGKDVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ L+DTPG+++ H M+ + + K++
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLFDTPGIINHHQMAHYVGKQSLKLITPTT 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GGL R D T S +++H K+E ADE+++ H
Sbjct: 244 EIKPMVFQLNEEQTLFFGGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYERH 301
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP ++ + + + + DV +GLGW ++ G A +
Sbjct: 302 AGELLNPPTPEE-LENMPEFVKYEFNIREPKTDV-----VFSGLGWVTVNESG-AKIVAH 354
Query: 603 TYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 355 VPKGVSVSLRKSLI 368
>gi|404417968|ref|ZP_10999750.1| GTPase YqeH [Staphylococcus arlettae CVD059]
gi|403489684|gb|EJY95247.1| GTPase YqeH [Staphylococcus arlettae CVD059]
Length = 368
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 183/380 (48%), Gaps = 53/380 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NEV + + DF ++ K G++V VVD DF
Sbjct: 35 EDVICKRCFRLKNY----NEVQDVGMNSDDFLNLLNGLTDK------KGIIVNVVDVFDF 84
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++LV K+DLLP Q++ R+ W++ A+
Sbjct: 85 EGSFINALKRIVGNK---------------KVILVANKLDLLPKQINKRRVTEWLKKTAR 129
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G+ +L+ I E + +V+++G N GKSTLIN ++
Sbjct: 130 KYGL-EAETVVLISAEKGWGIDDLMQAI-ESHRNQQDVYIVGTTNVGKSTLINKLIEQSV 187
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L + ++DTPG++ H ++ ++ E K + + E
Sbjct: 188 GEKDTVTTSRFPGTTLDMIDIP--LDETSFMFDTPGIIQEHQITHFVSDKELKTIMPKNE 245
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ GQ + GGL R+D + + S N+ +H K E A+++W+N +
Sbjct: 246 VKQRVYQLNEGQTLFFGGLARIDYVVGGKRPL--ICYFSNNLKIHRTKTEKANDLWRNQL 303
Query: 544 GIRLQPP-------IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
G L PP + +A L T K+++ D+ AGLG+ + +
Sbjct: 304 GSVLTPPSDPTQFDLDNVKAVRLETGKEKR-------------DVMIAGLGFIT--IDAG 348
Query: 597 ASLTLWTYDGIEITLREPLV 616
A + + +++ LR ++
Sbjct: 349 AKVIVRVPKNVDVILRNSIM 368
>gi|390631126|ref|ZP_10259093.1| Ribosome biogenesis GTPase YqeH [Weissella confusa LBAE C39-2]
gi|390483686|emb|CCF31441.1| Ribosome biogenesis GTPase YqeH [Weissella confusa LBAE C39-2]
Length = 380
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 188/417 (45%), Gaps = 50/417 (11%)
Query: 201 DGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQV 260
DG G G L++ K +L A + + E+ +C RC LR+Y
Sbjct: 13 DGLRCIGCG------ALIQTEHKGELGYAPMSALLKGFENEE---VLCQRCFRLRHY--- 60
Query: 261 KNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLE 320
NE+ + D DF RL+ +A +VV V+D DF G SL L
Sbjct: 61 -NEIQPVDLTDDDF------RLLLNEISATDSLVVYVMDVFDFSG--------SLIPGLH 105
Query: 321 EAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARK 380
+ + +LVG KVD+LP + +++ W+R +A G ++ V L S +
Sbjct: 106 RFVGNNPV-------LLVGNKVDVLPKSLKRSKIKDWMRQQANIAGLRPVD-VQLTSGKS 157
Query: 381 DLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK-KEGVKVSKLTEAPIPGTTL 439
V L+ I++ R +V+V+G N GKSTLIN K G +T + PGTTL
Sbjct: 158 GDDVPALMDMIEKYREGR-SVYVVGVTNVGKSTLINQIIKDATGDNKDVITTSRFPGTTL 216
Query: 440 GILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHV 499
RI L + DTPG++H M+ L + K V +KEL+P+TY++ Q + +
Sbjct: 217 D--RIEIPLDDDTFIIDTPGIIHQDQMAHYLTPKDLKYVSPQKELKPKTYQLNPQQTLFM 274
Query: 500 GGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASEL 559
G L R D Q E +T + N+ +H K+E ADE + H G L PP ++ L
Sbjct: 275 GALARFDFIQG--EKAGITAYFENNLMIHRTKLEKADEFYSKHAGELLLPPTTEN-LDML 331
Query: 560 GTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ + KV+ + DI GLGW + + + W +G+ + R ++
Sbjct: 332 PPLQRHEFKVTEKT------DIVIDGLGWIT--VPANTVVAGWAPEGVSVLTRRAMI 380
>gi|392972265|ref|ZP_10337657.1| ribosome biogenesis GTPase [Staphylococcus equorum subsp. equorum
Mu2]
gi|403046410|ref|ZP_10901879.1| GTP-binding protein YqeH [Staphylococcus sp. OJ82]
gi|392509978|emb|CCI60960.1| ribosome biogenesis GTPase [Staphylococcus equorum subsp. equorum
Mu2]
gi|402763106|gb|EJX17199.1| GTP-binding protein YqeH [Staphylococcus sp. OJ82]
Length = 366
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 179/356 (50%), Gaps = 53/356 (14%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNAN-AGVVVMVVDCVD 302
E +C RC L+NY NEV + + DF ++ +G A+ G+VV VVD D
Sbjct: 33 EDVICKRCFRLKNY----NEVQDVGLDSEDFLNLL-------NGLADEKGIVVNVVDVFD 81
Query: 303 FDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA 362
F+G F + + K K++LV K+DLLP Q++ R+ W++ A
Sbjct: 82 FEGSFINAIKRIVGNK---------------KIILVANKLDLLPKQINKRRVKEWLKKTA 126
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE 422
+ G + V L+SA K+ G+ +LLA I L NV+++G N GKSTLIN ++
Sbjct: 127 RKYGL-ETEDVVLISAEKNEGIDDLLASINTLRN-NDNVYIVGTTNVGKSTLINKLIERS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + ++DTPG++ H M+ + DE K + +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDDTSFMFDTPGVIQEHQMTHVVTDDELKTIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ GQ + GG+ R+D ++ S +++H K ENA+E+WKN
Sbjct: 243 EVKQRVYQLNEGQTLFFGGIARIDYVSGGRRSL--VCHFSNELNIHRTKTENANELWKNQ 300
Query: 543 VGIRLQPPIGQD-------RASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+G L PP D +A L T K+++ D+ +GLG+ ++
Sbjct: 301 LGALLSPPHNPDNFDLQNVKAVRLETGKEKR-------------DVMISGLGFITI 343
>gi|254736440|ref|ZP_05194146.1| GTP-binding protein YqeH [Bacillus anthracis str. Western North
America USA6153]
Length = 364
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 155/308 (50%), Gaps = 32/308 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGKSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L + K+ +LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NG--------SWLPGLHRFVGNNKV-------LLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ G + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + + K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKQSLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GL R D T S +++H K+E ADE++KNH
Sbjct: 244 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYKNH 301
Query: 543 VGIRLQPP 550
G L PP
Sbjct: 302 AGDLLSPP 309
>gi|222151493|ref|YP_002560649.1| GTP-binding protein YqeH [Macrococcus caseolyticus JCSC5402]
gi|222120618|dbj|BAH17953.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 396
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 160/313 (51%), Gaps = 31/313 (9%)
Query: 238 AQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMV 297
A K E +C RC L++Y ++++ N+ D DF M + + G++V V
Sbjct: 58 ASSLKKEDVICKRCFRLKHYNEIQDV---NMTSD-DF------LTMLNALSEKQGIIVNV 107
Query: 298 VDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
+D DF G + + + K K+++ K+DLLP ++ R+ W
Sbjct: 108 IDVFDFQGSWINGLKRIVGNK---------------KVIIAANKMDLLPKLINKRRVKLW 152
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
+ +AKA G + V L+SA+K+ G+ LL I+ L + +V+V+G N GKSTLIN
Sbjct: 153 IEKQAKALGMNP-DDVVLISAQKNHGIEELLESIETLRANQ-DVYVVGTTNVGKSTLINK 210
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
+ + +T + PGTTL ++ I L + L+DTPG++ H M+ + E K+
Sbjct: 211 LIETSVGEKDVITTSHFPGTTLDLIDIP--LDEHSFLFDTPGIIQAHQMTHYVTDKELKV 268
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
+ ++E++PR +++ GQ + +GGL+R+D ++ + S + +H K +NA E
Sbjct: 269 IMPKQEIKPRNFQLNEGQTLFLGGLVRVDYVSGGRRSL--NCFVSNLLHIHRTKTDNAQE 326
Query: 538 IWKNHVGIRLQPP 550
+W +G L PP
Sbjct: 327 LWYRQIGDLLTPP 339
>gi|256850837|ref|ZP_05556226.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 27-2-CHN]
gi|260661048|ref|ZP_05861962.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 115-3-CHN]
gi|297205711|ref|ZP_06923106.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii JV-V16]
gi|256615899|gb|EEU21087.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 27-2-CHN]
gi|260547985|gb|EEX23961.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 115-3-CHN]
gi|297148837|gb|EFH29135.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii JV-V16]
Length = 369
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 161/327 (49%), Gaps = 36/327 (11%)
Query: 229 AERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGN 288
A KA E + ++ C RC LR+Y ++ N DF RL+ G+
Sbjct: 27 ASALNKALEGENQE---VYCKRCFRLRHYSEIMPVELNN--DDF-------LRLLNSLGD 74
Query: 289 ANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
A ++V VVD DF+ SL L+ + +LVG KVDL P
Sbjct: 75 KKA-LIVNVVDLFDFN--------NSLIPSLKRFVGNNDF-------ILVGNKVDLFPLN 118
Query: 349 VSPTRLDRWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQ 407
+++ W+R A + G PK ++L+SA K +++L+A++ A +V+ +G
Sbjct: 119 SKESKIKDWMRQEANRMGLYPK--DIFLISAAKKRNLQDLIAYLDR-ASQNQDVYFVGTT 175
Query: 408 NAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMS 467
N GKSTLIN+ G +T + PGTTL ++I L + L DTPG++ ++
Sbjct: 176 NVGKSTLINSIIDLMGDVKDLITTSRFPGTTLDQIKIP--LDSGHYLVDTPGIMTDKQLA 233
Query: 468 MRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSL 527
LN + ++ +K L+P TY++ GQ + +GGL R+D S E TV+ + + +
Sbjct: 234 SYLNSKDLDLIAPKKPLKPATYQLNSGQTLFLGGLGRIDF--VSGEKTSFTVYTARGLYV 291
Query: 528 HLGKIENADEIWKNHVGIRLQPPIGQD 554
H K ENADE ++ HVG L PP G +
Sbjct: 292 HRTKTENADEFYEKHVGDLLTPPHGDE 318
>gi|433448806|ref|ZP_20411671.1| GTPase YqeH [Weissella ceti NC36]
gi|429539195|gb|ELA07232.1| GTPase YqeH [Weissella ceti NC36]
Length = 380
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 182/376 (48%), Gaps = 41/376 (10%)
Query: 242 KGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCV 301
+ E +C RC LR+Y NE+ + D DF RL+ G+ N+ +VV V+D
Sbjct: 45 ENEEILCQRCFRLRHY----NEIQPVSLTDDDF-----RRLLDQIGSTNS-LVVYVMDVF 94
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DF G SL + + K P ++LVG K+D+LP + +++ W+R +
Sbjct: 95 DFSG--------SLIPGIH------RFVGKNP-ILLVGNKIDVLPKSLRRSKIKDWMRQQ 139
Query: 362 AKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK 421
A G ++ + L S R + L+ I++ R +V+V+G N GKST+IN K
Sbjct: 140 ANIAGLRPID-IALTSGRTGDDLPALMDLIEKYREGR-DVYVVGVTNVGKSTMINQIIKD 197
Query: 422 -EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
G + +T + PGTTL RI L + + DTPG++H M+ L+ + K V
Sbjct: 198 VTGDQNDVITTSRFPGTTLD--RIEIPLDDDSAIIDTPGIIHQDQMAHYLSPKDLKYVTP 255
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KEL+PRTY++ Q + +G L R D Q + T + N+ +H K+E A++ +
Sbjct: 256 QKELKPRTYQLNPEQTLFMGALARFDYVQGAKGGF--TAYFDNNLMIHRTKLEKAEDFYA 313
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H G L PP + A +L + + K + + DI GLGW + + A +
Sbjct: 314 KHAGELLAPPSAEHLA-DLPPLQRHEFKTTQKT------DIVIDGLGWIT--VPANAVVA 364
Query: 601 LWTYDGIEITLREPLV 616
W G+ + R+ ++
Sbjct: 365 GWAPKGVSVLTRKAMI 380
>gi|377556235|ref|ZP_09785950.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gastricus PS3]
gi|376168658|gb|EHS87406.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gastricus PS3]
Length = 372
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 185/385 (48%), Gaps = 45/385 (11%)
Query: 235 AREAQK--EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
A QK E GE+ C RC LR+Y NE+A + D DF R+++
Sbjct: 30 ASAVQKGLESGEL-YCQRCFRLRHY----NEIAPVSLTDDDFLRLLS------HIRDTKS 78
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
++V VVD D +G SL L D + +LVG K DLLPS +
Sbjct: 79 LIVYVVDIFDVNG--------SLIPGLHRFVGDNPV-------MLVGNKEDLLPSSLRRN 123
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+L W+R + G ++ V LVSA+K+ + +LL I R +V+V+G N GKS
Sbjct: 124 KLRDWLRQQVNQAGIRPISTV-LVSAKKNHQIEDLLKEIDRRRNDR-DVYVVGVTNVGKS 181
Query: 413 TLINTFAK-KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
TLIN K + G+K +T + PGTTL + I L +L DTPG++H M+ L
Sbjct: 182 TLINQIIKLRTGIK-DLITTSRFPGTTLDQIEIP--LDDGHQLVDTPGIIHQAQMAHVLP 238
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
+ K+V +KE++PRTY+++ Q + +GG+ R D + + + + N+ +H K
Sbjct: 239 AKDLKVVTPQKEIKPRTYQLQDQQTIFLGGVARFDYLKGP--KVGIVGYFDNNLPMHRTK 296
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ +AD+ + H+G L PP D ++ + + + S D+ GLGW +
Sbjct: 297 LAHADDFYHKHLGGLLTPP-STDDLADFPPLERYEFAIKQKS------DLVFEGLGWMT- 348
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ + W G+ + +R ++
Sbjct: 349 -IPAGTVVAGWAPKGVAVLIRPAMI 372
>gi|423598348|ref|ZP_17574348.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD078]
gi|401236618|gb|EJR43075.1| ribosome biogenesis GTPase YqeH [Bacillus cereus VD078]
Length = 368
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 178/374 (47%), Gaps = 39/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGQSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEHYREGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + LYDTPG+++ H M+ + + K++
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDETSSLYDTPGIINHHQMAHYVGKQSLKLITPTT 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++P +++ Q + GGL R D T S +++H K+E ADE+ + H
Sbjct: 244 EVKPMVFQLNEEQTLFFGGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELHEKH 301
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP ++ + + + + DV +GLGW ++ G A +
Sbjct: 302 AGELLNPPTPEE-LENMPKFVKYEFNIREPKTDV-----VFSGLGWVTVNESG-AKIVAH 354
Query: 603 TYDGIEITLREPLV 616
G+ ++LR+ L+
Sbjct: 355 VPKGVSVSLRKSLI 368
>gi|241894958|ref|ZP_04782254.1| GTP-binding protein [Weissella paramesenteroides ATCC 33313]
gi|241871676|gb|EER75427.1| GTP-binding protein [Weissella paramesenteroides ATCC 33313]
Length = 380
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 175/370 (47%), Gaps = 41/370 (11%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+ + D DF RL++ + ++ +VV V+D DF G
Sbjct: 51 CQRCFRLRHY----NEIQPVNLTDDDF-----RRLLEQIADTDS-LVVYVMDVFDFSG-- 98
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
SL L + + +LVG KVD+LP + T++ W+R +A G
Sbjct: 99 ------SLIPGLHRFVGNNDV-------LLVGNKVDVLPRSLKRTKIKDWMRQQANIAGL 145
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK-EGVKV 426
++ + L S + + NLL I + R +V+V+G N GKSTLIN K+ G +
Sbjct: 146 RPID-IALTSGKNGDAIANLLDLIAKYRKGR-SVYVVGVTNVGKSTLINQIIKEVTGDRT 203
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+T + PGTTL RI L + + DTPG++H M+ L + K V +KE++P
Sbjct: 204 DVITTSRFPGTTLD--RIEIPLDDDSNIIDTPGIIHQDQMAHYLGVKDLKYVSPQKEIKP 261
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
+T+++ Q + +G L R D Q + +T + N+ +H K+ NAD + H G
Sbjct: 262 KTFQLNAEQTLFMGALARFDYIQG--DRTGITAYFENNLLIHRTKLANADAFYNKHAGEL 319
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L PP ++ +L + + K + + DI GLGW L + + W G
Sbjct: 320 LAPPTTEN-LDKLPPLQRHEFKTTEKT------DIVIDGLGW--LTVPANTVVAGWAPKG 370
Query: 607 IEITLREPLV 616
+ + R ++
Sbjct: 371 VSVLTRRAMI 380
>gi|365904269|ref|ZP_09442028.1| GTPase YqeH [Lactobacillus versmoldensis KCTC 3814]
Length = 371
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 173/370 (46%), Gaps = 43/370 (11%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC LRNY ++ + ++ + S ++ G++V VVD D++G
Sbjct: 45 LCKRCFRLRNYNEITDVDIDDD----------DFLKLLDSISSQKGLIVNVVDIFDYEG- 93
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
S+ L+ D + ++VG KVDLLP V+ +L W++ ++K G
Sbjct: 94 -------SVIPGLQRFVGDKNI-------LIVGNKVDLLPHSVNQNKLLNWIQQKSKENG 139
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
++ + +VSA+ + L+ I++ + +V+V+G N GKSTLIN
Sbjct: 140 IKSVDQI-MVSAQTGTNIDKLMTMIEKYRQGQ-DVYVVGTTNTGKSTLINRIISANSDVK 197
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+T + PGTTL + I L L DTPG++H + ++ L+ E K + +K+L+P
Sbjct: 198 DLITTSRFPGTTLDQIDIP--LDDGHFLIDTPGIIHKYQLAHYLDEKELKAITPKKQLRP 255
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
T++++ GQ + V GL R D ++ + + + LH K NADE ++ H+G
Sbjct: 256 STFQLRDGQTIFVAGLARFDFLDEKTNVVF---YFNQGLVLHRTKTVNADEFYQKHLGEI 312
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L PP +E + S DI GLGW + + + + +G
Sbjct: 313 LNPPYD---VTEFPKLHQEEFTSHRKS------DIVIYGLGWVT--IPANCKVLVHVPEG 361
Query: 607 IEITLREPLV 616
+ + +R+ ++
Sbjct: 362 VRVAMRDAII 371
>gi|421859665|ref|ZP_16291869.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
gi|410830763|dbj|GAC42306.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
Length = 372
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 178/370 (48%), Gaps = 36/370 (9%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC +++Y NE A + DF RL+ G +A +V+ +VD DFDG
Sbjct: 39 ICQRCFRIKHY----NEAASVALDQDDF-----LRLLGRIGQEDA-LVIHIVDLFDFDG- 87
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
S+ L+ + P L++V K+DLLP + RL WV+ +AK G
Sbjct: 88 -------SVISGLQ------RFVGNNPVLLVV-NKIDLLPRSTNWNRLTNWVQRQAKEHG 133
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
++ V LVSA+++ G L+ + R +V+V+GA N GKSTLIN
Sbjct: 134 L-RIVDVMLVSAKRNAGFERLVEQMSHWRRGR-DVYVVGATNVGKSTLINRLIHDYSDME 191
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+LT + PGTTL ++ I L + DTPG+++ ++ +R + + K L+P
Sbjct: 192 RELTTSRYPGTTLDVVHIP--LDDGKHIIDTPGIVYTSRLTELASRQDLGALLPDKPLKP 249
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
Y++ GQ + G R D + ++ T + S + +H K++ AD ++K H G
Sbjct: 250 SVYQLNEGQVLFFGAFARFDFVEGERQSF--TCYISNGLPIHRTKLDRADALYKEHRGEL 307
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L PP +DR +EL W + +++ + DI +GLGW K A + + G
Sbjct: 308 LSPPT-RDRLNELPAWTKHQYRIATGA----ETDIFISGLGWIKCNGKEGALVEIHAPKG 362
Query: 607 IEITLREPLV 616
+++ R ++
Sbjct: 363 VKVLTRRAMI 372
>gi|452818888|gb|EME26038.1| GTP-binding protein [Galdieria sulphuraria]
Length = 479
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 196/423 (46%), Gaps = 65/423 (15%)
Query: 237 EAQKEKGEVTVCARCHSLRNYGQVKNEV------AENLIPDFDFDRVIATRL--MKPSGN 288
E + K +C RC L +YG++ ++ E L+ I +L + S +
Sbjct: 61 EIVESKARTALCKRCFQLIHYGKLDEKLRLPAATMEELVEAVTGTAGIVQKLKTLFSSLS 120
Query: 289 ANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
++++V+D D G SLF ++ +A L ++ K+DLLPS
Sbjct: 121 KEKFLILLVLDIFDLCG--------SLFSGIQNCLANADL-------IICVNKIDLLPS- 164
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN-VWVIGAQ 407
V +L +++ + G + V VS + G+++L + L PRG V+V+G
Sbjct: 165 VDCQKLVPYIKDTMQRKGLENIQSVRFVSCKTGRGIQSLRREL--LHIPRGKRVFVVGVA 222
Query: 408 NAGKSTLINTF--AKKEGVKV-------SKLTEAP------------------------I 434
N GKS+++N + ++ VK K+ +AP +
Sbjct: 223 NVGKSSILNQLKLSFRDEVKYRSRRELNHKMKKAPKTLTESQLKDIEKSAEEVPITTSVV 282
Query: 435 PGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGG 494
PGTTL + + + K+YDTPGL + +S L+ +E K+V +K ++P +R + G
Sbjct: 283 PGTTLEVFPVK--IGKGYKIYDTPGLFLNNHLSHLLSTEELKLVIPQKSIKPICFRFQEG 340
Query: 495 QAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQD 554
Q + +GGL R+ + + +V V+AS VS+H+ A++ +H+ L+PP+ ++
Sbjct: 341 QHLFLGGLARIHFVEG--KPFHVVVYASSEVSIHISSCREAEQFLSSHMSQLLKPPLDKN 398
Query: 555 RASELGT-WKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLRE 613
++ W+ + + G W + DIA AGLGW S G+ + GI + LR+
Sbjct: 399 WIHQMAIQWETNRFSIQGKGWKESAGDIAIAGLGWISFVGCGKMEVDCIVPRGIRLELRD 458
Query: 614 PLV 616
PL+
Sbjct: 459 PLL 461
>gi|291000866|ref|XP_002683000.1| GTP-binding protein [Naegleria gruberi]
gi|284096628|gb|EFC50256.1| GTP-binding protein [Naegleria gruberi]
Length = 677
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 150/570 (26%), Positives = 253/570 (44%), Gaps = 113/570 (19%)
Query: 109 CPGCGIFMQDKDPNLPGYYKQK---KDIERNEEF--LEDE-EGIENDIEGFEEDIVDGNF 162
C GCG +Q + PG+ K K I E+F LE+E + +E + + ++ V
Sbjct: 138 CTGCGATLQTESTEKPGFIHPKSVEKRISEQEKFSKLEEEMQKLELEKQRVLKEKVQEMQ 197
Query: 163 DQSDGKESDSGDGDVFDDWDSDEWEAK-----FLGEDEDDLDLDGFTPAGVGYGNITEEL 217
D+++G + + + +S + + FL D D+ +L + G +++L
Sbjct: 198 DKNEGMTEEEAISTIENVRNSPVGKNQPPPEGFLVMDMDEFNL--YKKFLKHKGKTSQQL 255
Query: 218 VERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYG-----QVKNEVAENLIPDF 272
++ S LS+ VC RCH LRNYG QV E A +
Sbjct: 256 IDES----LSEL-----------------VCQRCHQLRNYGVYSTVQVDQEAARQV---- 290
Query: 273 DFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKLSKK 331
F+R+ ++L K + +++ V+D D G + P FK + + +
Sbjct: 291 -FERI--SQLKKKA------LIIYVIDLFDTHGSIIPN------FKDIIGSHHN------ 329
Query: 332 LPKLVLVGTKVDLLPSQVSPT-----------------RLDRWVRHRAK--------AGG 366
+++V KVDLL S RL+ WVR K
Sbjct: 330 ---VLVVANKVDLLLKGRSSYDRRPDTEKERTKALIYRRLEEWVRRILKKDFELFLTTEE 386
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK--EGV 424
+L G+ +VS+ ++ L + G+V+VIG N GKST IN K+ E
Sbjct: 387 RSQLVGIEVVSSTTGTNMKQLHEKMNSYRKG-GDVYVIGCTNVGKSTFINQLFKQQYESR 445
Query: 425 KVS-KLTEAPIPGTTLGILR--IGGILPAKAKLYDTPGLLHPH--LMSMRLNRDEQKMVE 479
K + +T + +PGTTL + I +A L+DTPG+L+ H L + L ++ K +
Sbjct: 446 KSNISITTSTLPGTTLKTISFPITTATGERANLFDTPGVLNQHQKLFTDYLKYEDWKYII 505
Query: 480 IRKE-LQPRTYRVKGGQAVHVGGLMRLDLDQASVET-----IYVTVWASPNVSLHLGKIE 533
+ + PR R++ G+ + GL RLD + +V+ +V+ S +S+H IE
Sbjct: 506 PDGDVIDPRFVRLRPGRCFFLSGLFRLDYIEDNVQNEDWNRCIFSVFTSSRLSIHCTGIE 565
Query: 534 NADEIWKNHVG------IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLG 587
ADE ++ HVG ++ PPI + G K K KV+GT+ + +DI G+G
Sbjct: 566 KADEFYEKHVGRNATPEYQIVPPIDGKDSLIYGLNKSLKFKVNGTTRRESILDICIGGIG 625
Query: 588 WFSLGLKGEASLTLWTYDGIEITLREPLVL 617
W S+ GE + + T + +++ LR+P ++
Sbjct: 626 WISITGVGEMTFEVHTNEHVQVYLRQPCLM 655
>gi|403743307|ref|ZP_10952921.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122830|gb|EJY57022.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus hesperidum
URH17-3-68]
Length = 409
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 173/371 (46%), Gaps = 46/371 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
+C RC +R+YG E + + + +A +P G+V+ VVD D G
Sbjct: 44 VLCRRCFRIRHYG----EFLPVTVDESTYQAQVAQIFERP------GLVLYVVDVFDLAG 93
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
A+ + ++V+V KVDLLP +V TRL W+R + +
Sbjct: 94 SLVPNLARFVLNS---------------EVVVVVNKVDLLPERVQYTRLADWIREQVERT 138
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIK-ELAGPRGNVWVIGAQNAGKSTLINTFAKKEGV 424
P ++ V VSA K LG+ +L ++ E P V+V+G N GKSTL+N A +
Sbjct: 139 RVP-VSDVLFVSAEKQLGIEQVLGLVEWETERP---VYVVGMANTGKSTLLNAIAGRLSD 194
Query: 425 KVSKLTEAPIPGTTLGI--LRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
K + T + PGTTL + L I G + +LYDTPGL+H + RL D ++V +
Sbjct: 195 KKAPYTVSRRPGTTLALSRLEITG-RHGRIELYDTPGLVHEARVIERLCVDCLRIVVPQS 253
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
L+PR Y++ Q + +GG++RLD ++ + I ++ + ++ +H K+ ADEIW+ H
Sbjct: 254 RLRPRVYQLNPEQTLFLGGIVRLDFERGDRQPI--VLYVANDLPVHRTKLSRADEIWERH 311
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKV--------SGTSWDVNGIDIAAAGLGWFSLG-- 592
LQ P R R +V + G DI GLGW +L
Sbjct: 312 QDDILQVPCAACRPDFANRRSIRLQRVRRGEPSARGSLAISGRGSDIVIPGLGWIALSGR 371
Query: 593 -LKGEASLTLW 602
GE S+ W
Sbjct: 372 PFDGELSVPAW 382
>gi|418576003|ref|ZP_13140150.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|418576029|ref|ZP_13140175.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325091|gb|EHY92223.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325751|gb|EHY92882.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 368
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 179/356 (50%), Gaps = 53/356 (14%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVD 302
E +C RC L+NY NEV + + DF ++ +G A+ G+VV VVD D
Sbjct: 35 EDVICKRCFRLKNY----NEVQDVGLDSEDFLNLL-------NGLADKKGIVVNVVDVFD 83
Query: 303 FDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA 362
F+G F + + K +++LVG K+DLLP Q++ R+ W++ A
Sbjct: 84 FEGSFINAIKRIVGNK---------------QIILVGNKLDLLPKQINKRRVKEWLKKTA 128
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE 422
+ G V L+SA K+ G+ +LL I L +V+++G N GKSTLIN ++
Sbjct: 129 RKYGLDA-EDVILISAEKNEGIEDLLNAINTLRN-NDDVYIVGTTNVGKSTLINKLIERS 186
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ + +T + PGTTL ++ I L + +YDTPG++ H M+ + E K + +K
Sbjct: 187 VGEKNVVTTSRFPGTTLDMIDIP--LDDTSFMYDTPGVIQEHQMTHYVTEKELKTIMPKK 244
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ GQ + GGL R+D + + S ++++H K ENA+E+W+N
Sbjct: 245 EVKQRVYQLNEGQTLFFGGLARIDYISGGKRPL--VCYFSNDLNIHRTKTENANELWRNQ 302
Query: 543 VGIRLQPPIGQD-------RASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+G L PP D +A L T K+++ D+ +GLG+ ++
Sbjct: 303 LGDVLSPPNNPDHFDLQNVKAVRLETGKEKR-------------DVMISGLGFITI 345
>gi|73662470|ref|YP_301251.1| GTP-binding protein YqeH [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494985|dbj|BAE18306.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
Length = 368
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 179/356 (50%), Gaps = 53/356 (14%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVD 302
E +C RC L+NY NEV + + DF ++ +G A+ G+VV VVD D
Sbjct: 35 EDVICKRCFRLKNY----NEVQDVGLDSEDFLNLL-------NGLADKKGIVVNVVDVFD 83
Query: 303 FDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA 362
F+G F + + K +++LVG K+DLLP Q++ R+ W++ A
Sbjct: 84 FEGSFINAIKRIVGNK---------------QIILVGNKLDLLPKQINKRRVKEWLKKTA 128
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE 422
+ G V L+SA K+ G+ +LL I L +V+++G N GKSTLIN ++
Sbjct: 129 RKYGLDA-EDVILISAEKNEGIEDLLNAINTLRN-NDDVYIVGTTNVGKSTLINKLIERS 186
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ + +T + PGTTL ++ I L + +YDTPG++ H M+ + E K + +K
Sbjct: 187 VGEKNVVTTSRFPGTTLDMIDIP--LDDTSFMYDTPGVIQEHQMTHYVTEKELKTIMPKK 244
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ GQ + GGL R+D + + S ++++H K ENA+E+W+N
Sbjct: 245 EVKQRVYQLNEGQTLFFGGLARIDYISGGKRPL--VCYFSNDLNIHRTKTENANELWRNQ 302
Query: 543 VGIRLQPPIGQD-------RASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+G L PP D +A L T K+++ D+ +GLG+ ++
Sbjct: 303 LGDVLSPPNNPDHFDLQNVKAVRLETGKEKR-------------DVMISGLGFITI 345
>gi|118586522|ref|ZP_01543965.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163]
gi|118433026|gb|EAV39749.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163]
Length = 497
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 177/378 (46%), Gaps = 42/378 (11%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC L+NY Q+ E + D D + I T + + +V+ +VD D G
Sbjct: 58 LCERCFKLKNYNQI-----EPVAFDSDHFQKILTSI-----SDKKALVLYLVDLFDVGG- 106
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
S+ L + + VLVG K D+LP V ++ W+ AK G
Sbjct: 107 -------SMINGLTRFIGNNPV-------VLVGNKFDILPKSVKKNKIANWLTKEAKNEG 152
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
L V L + + D G + LL I + ++V+G N GKSTLIN K+ +
Sbjct: 153 IKVLKTVVLSADKGDSG-QYLLEEISDYIDEYEEIFVVGVTNVGKSTLINQIIKQISGRG 211
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
S +T + PGTTL + I L K ++ DTPG++H M+ ++ + K + KE++
Sbjct: 212 SVITTSRFPGTTLDKIEIP--LTEKTRVIDTPGIIHDSQMAHFIDSKDFKYLLPNKEVKA 269
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
RT ++ GQA+ + GL +D S I VT + N+ LH GKIENA++++ + G
Sbjct: 270 RTLQLSKGQAIFLAGLGWIDFLNKS--KISVTAYFENNIELHRGKIENAEKLFSSQAGRL 327
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L+P + E + +++K+ D A +GLGWF+ A + G
Sbjct: 328 LKPTV----LKEYRELEKKEIKLKANQ------DFAISGLGWFT--FHDSAPICFHLAKG 375
Query: 607 IEITLREPLVLDRAPFLE 624
+ ++R+ LDR +E
Sbjct: 376 LGFSVRQAENLDRIKAME 393
>gi|161507853|ref|YP_001577817.1| GTP-binding protein YqeH [Lactobacillus helveticus DPC 4571]
gi|160348842|gb|ABX27516.1| GTP-binding protein [Lactobacillus helveticus DPC 4571]
Length = 369
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 188/386 (48%), Gaps = 44/386 (11%)
Query: 232 KKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA 291
K +A+ E+ C RC LR+Y NE+ + + DF ++ + K +
Sbjct: 27 KSALEKAKNEENTDVYCQRCFKLRHY----NEIMPVDLNNDDFLALLNSLAEKKA----- 77
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
++V VVD DF + SL L+ + +LVG K DL P
Sbjct: 78 -LIVNVVDLFDF--------SNSLLSSLKRFVGNNDF-------ILVGNKFDLFPKNSKQ 121
Query: 352 TRLDRWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
+++ W+R A + G PK ++LVSA+K L + +L+++I + + + +V+ +G N G
Sbjct: 122 SKIKDWMRQEANRMGLYPK--DIFLVSAKKKLNLESLISYINDQSQDK-DVYFVGTTNVG 178
Query: 411 KSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRL 470
KSTLIN G + +T + PGTTL + I L L DTPG++ + ++ L
Sbjct: 179 KSTLINAIIDMMGDIQNLITTSRFPGTTLDQIEIP--LENGHFLIDTPGIMTDNQLATHL 236
Query: 471 NRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLG 530
N + +++ +K L+P TY++ G + + GL R+D + E+ T++ + N+ +H
Sbjct: 237 NAKDLELISPKKPLKPATYQLLPGNTLFLAGLGRIDYLKG--ESTSFTIYVARNMYVHRT 294
Query: 531 KIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFS 590
K NAD ++ H G L PP D+ + L K ++ K S D+ G+G+ +
Sbjct: 295 KTTNADAFYEKHKGELLAPPSPDDQMAPL---KGKEFKTEFKS------DLLFGGIGFVT 345
Query: 591 LGLKGEASLTLWTYDGIEITLREPLV 616
+ KG + +T DGI + +R L+
Sbjct: 346 VP-KG-CLVKTYTPDGIGLGIRRALI 369
>gi|66812700|ref|XP_640529.1| hypothetical protein DDB_G0281603 [Dictyostelium discoideum AX4]
gi|60468560|gb|EAL66563.1| hypothetical protein DDB_G0281603 [Dictyostelium discoideum AX4]
Length = 650
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 183/399 (45%), Gaps = 85/399 (21%)
Query: 202 GFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEV--------------TV 247
G+ P + +I E+ ++K+ K E K E K E V
Sbjct: 142 GYLPESIAIKHI-----EQLNEEKIEKIENSKPIEEQDKSGEEYFNSFYIIKKKNNEKKV 196
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RCH L+NYG+V A IP F ++ + N +VV VVD +DF+G F
Sbjct: 197 CQRCHILKNYGRV----APVAIPIEKFKDNLSQL-----KDLNC-LVVKVVDLMDFNGTF 246
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
+D ++ + P +++VG K+DLLP + R+++W+R AK G
Sbjct: 247 --------------IEDFREIIGRNP-VIVVGNKMDLLPDDIHKDRIEQWIRTEAKKRGL 291
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV- 426
++ V L+S+ G++ + +++L R +V+++G N GKST +NT K+ +V
Sbjct: 292 NHISHVKLISSASGDGMKQFIIELEKLRKSR-DVFIVGCSNVGKSTFVNTLIKEYNNRVE 350
Query: 427 ----------------------------------SKLTEAPIPGTTLGILRIGGILPAKA 452
SK+T + +PGTTL +L + L +
Sbjct: 351 FTTNEKLESKKQSEPLTIQEQKDLDREKLLKSLQSKITTSVLPGTTLNLLSLP--LWDNS 408
Query: 453 KLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASV 512
L+DTPG+ +P M L DE K V K ++P+ + G+++ +GGL+R+D D +
Sbjct: 409 TLFDTPGIDNPRQMIKNLTIDELKQVIPSKRIKPQLAHMIEGKSLFIGGLVRIDYD-GPL 467
Query: 513 ETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPI 551
T ++ S ++ LH+ + A+ I K H G L PPI
Sbjct: 468 STF--MIYTSNSIPLHITSTQKANFILKRHQGSFLTPPI 504
>gi|239637592|ref|ZP_04678564.1| ribosome biogenesis GTPase YqeH [Staphylococcus warneri L37603]
gi|239596810|gb|EEQ79335.1| ribosome biogenesis GTPase YqeH [Staphylococcus warneri L37603]
Length = 366
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 177/355 (49%), Gaps = 51/355 (14%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NEV + + DF ++ + +G+VV VVD DF
Sbjct: 33 EDVICKRCFRLKNY----NEVQDVGMDSEDFLNLLT------GLSDKSGIVVNVVDVFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++LV K+DLLP Q++ R+ W++ AK
Sbjct: 83 EGSFINAIKRIVGNK---------------KIILVANKMDLLPKQINHRRVKEWLKRAAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G+ +LL I + + +V+++G N GKSTLIN +
Sbjct: 128 KYGL-EAEDVVLISAEKGQGIEDLLDSINKYRD-QEDVYIVGTTNVGKSTLINKLIELSV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L K+ ++DTPG++ H M+ + E K+V +KE
Sbjct: 186 GEKDVVTTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQMTHFVTEKELKLVMPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ GQ + GGL R+D + + S +++H K E A+E+WKNH+
Sbjct: 244 IKQRVYQLNEGQTLFFGGLARIDYVSGGKRPL--VCFFSNELNIHRTKTEKANELWKNHI 301
Query: 544 GIRLQPP-------IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
G L PP + + +A L T K+++ D+ +GLG+ ++
Sbjct: 302 GDLLTPPHDPSQFNMSEMKAVRLETGKEKR-------------DVMISGLGFITI 343
>gi|260103146|ref|ZP_05753383.1| GTP-binding protein [Lactobacillus helveticus DSM 20075]
gi|417009774|ref|ZP_11945910.1| GTPase YqeH [Lactobacillus helveticus MTCC 5463]
gi|260083056|gb|EEW67176.1| GTP-binding protein [Lactobacillus helveticus DSM 20075]
gi|328464795|gb|EGF36110.1| GTPase YqeH [Lactobacillus helveticus MTCC 5463]
Length = 369
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 188/386 (48%), Gaps = 44/386 (11%)
Query: 232 KKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA 291
K +A+ E+ C RC LR+Y NE+ + + DF ++ + K +
Sbjct: 27 KGALEKAKNEENTDVYCQRCFKLRHY----NEIMPVDLNNDDFLALLNSLAEKKA----- 77
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
++V VVD DF + SL L+ + +LVG K DL P
Sbjct: 78 -LIVNVVDLFDF--------SNSLLSSLKRFVGNNDF-------ILVGNKFDLFPKNSKQ 121
Query: 352 TRLDRWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
+++ W+R A + G PK ++LVSA+K L + +L+++I + + + +V+ +G N G
Sbjct: 122 SKIKDWMRQEANRMGLYPK--DIFLVSAKKKLNLESLISYINDQSQDK-DVYFVGTTNVG 178
Query: 411 KSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRL 470
KSTLIN G + +T + PGTTL + I L L DTPG++ + ++ L
Sbjct: 179 KSTLINAIIDMMGDIQNLITTSRFPGTTLDQIEIP--LENGHFLIDTPGIMTDNQLATHL 236
Query: 471 NRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLG 530
N + +++ +K L+P TY++ G + + GL R+D + E+ TV+ + N+ +H
Sbjct: 237 NAKDLELISPKKPLKPATYQLLPGNTLFLAGLGRIDYLKG--ESTSFTVYVARNMYVHRT 294
Query: 531 KIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFS 590
K NAD ++ H G L PP D+ + L K ++ K S D+ G+G+ +
Sbjct: 295 KTTNADAFYEKHKGELLAPPSPDDQMAPL---KGKEFKTEFKS------DLLFGGIGFVT 345
Query: 591 LGLKGEASLTLWTYDGIEITLREPLV 616
+ KG + +T DGI + +R L+
Sbjct: 346 VP-KG-CLVKTYTPDGIGLGIRRALI 369
>gi|52081117|ref|YP_079908.1| GTP-binding protein YqeH [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319644926|ref|ZP_07999159.1| YqeH protein [Bacillus sp. BT1B_CT2]
gi|404489998|ref|YP_006714104.1| GTPase YqeH [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423683094|ref|ZP_17657933.1| GTP-binding protein YqeH [Bacillus licheniformis WX-02]
gi|52004328|gb|AAU24270.1| essential GTPase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52348997|gb|AAU41631.1| ribosomal assembly protein YqeH [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317392735|gb|EFV73529.1| YqeH protein [Bacillus sp. BT1B_CT2]
gi|383439868|gb|EID47643.1| GTP-binding protein YqeH [Bacillus licheniformis WX-02]
Length = 366
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 181/375 (48%), Gaps = 42/375 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF +++ G ++ ++V +VD DF
Sbjct: 32 EDVICQRCFRLKNY----NEIQDVSLTDDDF-----LKILHGIGETDS-LIVKIVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + ++L+G K D+LP V RL W++ AK
Sbjct: 82 NGSWINGLNRFVGGN---------------PILLIGNKADILPKSVKRERLVNWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V LVSA + G+++ + I+ + +V+V+G N GKST IN K+
Sbjct: 127 ELGLRPVD-VLLVSAGRGQGMKDAIDAIEHYRQGK-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL + I L + +YDTPG+++ H M+ + + + K++ +KE
Sbjct: 185 GEDDIITTSQYPGTTLDAIEIP--LDDGSAMYDTPGIINHHQMAHYVAKRDLKILTPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPN-VSLHLGKIENADEIWKNH 542
L+PRT+++ Q + GGL R D + V PN + +H K+ENAD++++ H
Sbjct: 243 LKPRTFQLNEEQTLFFGGLSRFDYASGGRSSF---VCYMPNELKIHRTKLENADQLYEKH 299
Query: 543 VGIRLQPPIGQDRASELGTWKDR-KLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTL 601
G L PP +D S K +K T D+ +GLGW ++ +
Sbjct: 300 AGEMLAPPAKEDLDSFPALVKHTFTIKEPKT-------DVVFSGLGWVTVQ-GANQKIVA 351
Query: 602 WTYDGIEITLREPLV 616
G+ + LR L+
Sbjct: 352 HAPKGVHVFLRRSLI 366
>gi|385813393|ref|YP_005849786.1| Ribosome biogenesis GTPase YqeH [Lactobacillus helveticus H10]
gi|323466112|gb|ADX69799.1| Ribosome biogenesis GTPase YqeH [Lactobacillus helveticus H10]
Length = 369
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 188/386 (48%), Gaps = 44/386 (11%)
Query: 232 KKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA 291
K +A+ E+ C RC LR+Y NE+ + + DF ++ + K +
Sbjct: 27 KSALEKAKNEENTDVYCQRCFKLRHY----NEIMPVDLNNDDFLALLNSLAEKKA----- 77
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
++V VVD DF + SL L+ + +LVG K DL P
Sbjct: 78 -LIVNVVDLFDF--------SNSLLSSLKRFVGNNDF-------ILVGNKFDLFPKNSKQ 121
Query: 352 TRLDRWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
+++ W+R A + G PK ++LVSA+K L + +L+++I + + + +V+ +G N G
Sbjct: 122 SKIKDWMRQEANRMGLYPK--DIFLVSAKKKLNLESLISYINDQSQDK-DVYFVGTTNVG 178
Query: 411 KSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRL 470
KSTLIN G + +T + PGTTL + I L L DTPG++ + ++ L
Sbjct: 179 KSTLINAIIDMMGDIQNLITTSRFPGTTLDQIEIP--LENGHFLIDTPGIMTDNQLATHL 236
Query: 471 NRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLG 530
N + +++ +K L+P TY++ G + + GL R+D + E+ TV+ + N+ +H
Sbjct: 237 NAKDLELISPKKPLKPATYQLLPGNTLFLAGLGRIDYLKG--ESTSFTVYVARNMYVHRT 294
Query: 531 KIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFS 590
K NAD ++ H G L PP D+ + L K ++ K S D+ G+G+ +
Sbjct: 295 KTTNADAFYEKHKGELLAPPSPDDQMALL---KGKEFKTEFKS------DLLFGGIGFVT 345
Query: 591 LGLKGEASLTLWTYDGIEITLREPLV 616
+ KG + +T DGI + +R L+
Sbjct: 346 VP-KG-CLVKTYTPDGIGLGIRRALI 369
>gi|58337796|ref|YP_194381.1| GTP-binding protein YqeH [Lactobacillus acidophilus NCFM]
gi|227904446|ref|ZP_04022251.1| GTP-binding protein [Lactobacillus acidophilus ATCC 4796]
gi|58255113|gb|AAV43350.1| GTP-binding protein [Lactobacillus acidophilus NCFM]
gi|227867821|gb|EEJ75242.1| GTP-binding protein [Lactobacillus acidophilus ATCC 4796]
Length = 369
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 187/386 (48%), Gaps = 44/386 (11%)
Query: 232 KKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA 291
K +A++E+ C RC LR+Y ++ + D + D +A + S +
Sbjct: 27 KSALDKAKREENTDVYCQRCFRLRHYNEI-------MPVDLNNDDFLA---LLNSLSEKK 76
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV VVD DF + SL L+ + +LVG K DL P
Sbjct: 77 ALVVNVVDLFDF--------SNSLLSSLKRFVGNNDF-------ILVGNKFDLFPKNSKQ 121
Query: 352 TRLDRWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
+++ W+R A + G PK ++LVSA+K + + +L+++I + + + +V+ +G N G
Sbjct: 122 SKIKDWMRQEANRMGLYPK--DIFLVSAKKKVNLESLISYINDHSQDK-DVYFVGTTNVG 178
Query: 411 KSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRL 470
KSTLIN G +T + PGTTL + I L L DTPG++ + ++ L
Sbjct: 179 KSTLINAIIDMMGDIQDLITTSRFPGTTLDQIEIP--LENGHFLIDTPGIMTDNQLATHL 236
Query: 471 NRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLG 530
N + ++V +K L+P TY++ G + + GL R+D + E+ TV+ + ++ +H
Sbjct: 237 NAKDLELVSPKKPLKPATYQLLPGNTLFLAGLGRIDFLKG--ESTSFTVYVARDMYVHRT 294
Query: 531 KIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFS 590
K NAD ++ H G L PP D+ + L K ++ + S D+ G+G+ +
Sbjct: 295 KTANADAFYEKHKGELLTPPSADDQMAPL---KGKEFRTDYKS------DLLFGGIGFVT 345
Query: 591 LGLKGEASLTLWTYDGIEITLREPLV 616
+ KG T +T DGI + +R L+
Sbjct: 346 VP-KGCVVKT-YTPDGIGLGIRRALI 369
>gi|403514618|ref|YP_006655438.1| GTPase YqeH [Lactobacillus helveticus R0052]
gi|403080056|gb|AFR21634.1| GTPase YqeH [Lactobacillus helveticus R0052]
Length = 369
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 188/386 (48%), Gaps = 44/386 (11%)
Query: 232 KKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA 291
K +A+ E+ C RC LR+Y NE+ + + DF ++ + K +
Sbjct: 27 KSALEKAKNEENTDVYCQRCFKLRHY----NEIMPVDLNNDDFLALLNSLAEKKA----- 77
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
++V VVD DF + SL L+ + +LVG K DL P
Sbjct: 78 -LIVNVVDLFDF--------SNSLLSSLKRFVGNNDF-------ILVGNKFDLFPKNSKQ 121
Query: 352 TRLDRWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
+++ W+R A + G PK ++LVSA+K L + +L+++I + + + +V+ +G N G
Sbjct: 122 SKIKDWMRQEANRMGLYPK--DIFLVSAKKKLNLESLISYINDQSQDK-DVYFVGTTNVG 178
Query: 411 KSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRL 470
KSTLIN G + +T + PGTTL + I L L DTPG++ + ++ L
Sbjct: 179 KSTLINAIIDMMGNIQNLITTSRFPGTTLDQIEIP--LENGHFLIDTPGIMTDNQLATHL 236
Query: 471 NRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLG 530
N + +++ +K L+P TY++ G + + GL R+D + E+ TV+ + N+ +H
Sbjct: 237 NAKDLELISPKKPLKPATYQLLPGNTLFLVGLGRIDYLKG--ESTSFTVYVARNMYVHRT 294
Query: 531 KIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFS 590
K NAD ++ H G L PP D+ + L K ++ K S D+ G+G+ +
Sbjct: 295 KTTNADAFYEKHKGELLTPPSPDDQMAPL---KGKEFKTEFKS------DLLFGGIGFVT 345
Query: 591 LGLKGEASLTLWTYDGIEITLREPLV 616
+ KG + +T DGI + +R L+
Sbjct: 346 VP-KG-CLVKTYTPDGIGLGIRRALI 369
>gi|374709075|ref|ZP_09713509.1| GTPase YqeH [Sporolactobacillus inulinus CASD]
Length = 366
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 184/371 (49%), Gaps = 42/371 (11%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
VC RC L +Y NEV + + DF T L K S + +VV +VD D
Sbjct: 35 VCQRCFRLAHY----NEVQDVSLTADDF----LTMLSKIS--EHDALVVYLVDLFD---- 80
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
+A S L+ + P L LVG K DL P +P +L W+R A+ G
Sbjct: 81 ----SAGSWVPGLQ------RFVGGNPVL-LVGNKSDLFPKSTNPNKLSSWIRRSAREQG 129
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
++ V L+SA K+ G+ + A I R +V+V+GA N GKST IN + G
Sbjct: 130 LKPVD-VRLMSASKNHGLDEVAAAIDHYRNGR-DVYVVGATNVGKSTFINHLIQHLGTGD 187
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN-RDEQKMVEIRKELQ 485
S +T + PGTTL + I L LYDTPG+++ H + ++ RD +K++ + KE++
Sbjct: 188 SAITTSRFPGTTLDFIEIP--LGDGGNLYDTPGIINDHQAAHFIDPRDLKKIMPV-KEIK 244
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P+ +++ Q + +GGL RLD + ++ V+AS ++ +H K+E AD+++ +G
Sbjct: 245 PKVFQLNERQTLFLGGLGRLDYIGPARRSL--IVYASSSLVIHRTKMEQADDLYARQLGH 302
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
L PP + + + R D D+ +GLGW ++ +G A +T +
Sbjct: 303 LLTPPSEKVDLPPMERFDFRT--------DQEECDLVFSGLGWITIKGQG-ARITAYAPK 353
Query: 606 GIEITLREPLV 616
GI ++LR L+
Sbjct: 354 GIGVSLRSSLI 364
>gi|374603054|ref|ZP_09676039.1| nitric-oxide synthase [Paenibacillus dendritiformis C454]
gi|374391367|gb|EHQ62704.1| nitric-oxide synthase [Paenibacillus dendritiformis C454]
Length = 372
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 177/370 (47%), Gaps = 36/370 (9%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC +++Y NE A + DF RL+ G +A +V+ +VD DFDG
Sbjct: 39 ICQRCFRIKHY----NEAASVALDQDDF-----LRLLGRIGQEDA-LVIHIVDLFDFDG- 87
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
S+ L+ + P L++V K+DLLP + RL WV+ +AK G
Sbjct: 88 -------SVISGLQ------RFVGNNPVLLVV-NKIDLLPRSTNWNRLTNWVQRQAKEHG 133
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
L+ V LVSA+++ G L+ + R +V+V+GA N GKSTLIN
Sbjct: 134 LRILD-VILVSAKRNAGFERLVEQMSHWRRGR-DVYVVGATNVGKSTLINRLIHDYSDMD 191
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+LT + PGTTL ++ I L + DTPG+++ ++ +R + + K L+P
Sbjct: 192 RELTTSRYPGTTLDVVHIP--LDDGKHIIDTPGIVYTSRLTELASRQDLGALLPDKPLKP 249
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
Y++ GQ + G R D + ++ T + S + +H K+E AD +++ H G
Sbjct: 250 AVYQLNEGQTMFFGAFARFDFVEGERQSF--TCYISNGLPIHRTKLERADALYEEHRGEL 307
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L PP +DR +L W + +++ S DI +GLGW K A + + G
Sbjct: 308 LAPPT-RDRLDDLPGWTKHQYRIATGS----ETDIFISGLGWIKCNGKEGALVEIHAPKG 362
Query: 607 IEITLREPLV 616
+++ R ++
Sbjct: 363 VKVLTRRAMI 372
>gi|329925908|ref|ZP_08280618.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. HGF5]
gi|328939559|gb|EGG35908.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. HGF5]
Length = 375
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 175/371 (47%), Gaps = 36/371 (9%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
+C RC ++NY NE + + +F RL+ G NA +V+ +VD DF+G
Sbjct: 41 VICQRCFRIKNY----NEASSVAVDQDEF-----LRLLGQIGGKNA-LVIHIVDLFDFEG 90
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
SL L+ + + +L K DLLP + ++ WV+ + K
Sbjct: 91 --------SLISGLQRFVGNNPV-------ILAVNKTDLLPKVTNWNKVLNWVQKQCKEH 135
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G + + L SA+K+ G LL + G R +V+V+GA N GKS+LIN +
Sbjct: 136 GL-RTEEIVLCSAKKNQGFERLLETVAHYRGDR-DVYVVGATNVGKSSLINRLIRDYSDL 193
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
+LT + PGTTL ++ I L + DTPG+++P S ++R++ V L+
Sbjct: 194 DQELTVSRYPGTTLDMVNIP--LDDGRYIIDTPGIVYPWRYSELVSREDLGTVMPENPLK 251
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P Y++ GQ + GG R D Q ++ T + S + +H K+E AD ++ H G
Sbjct: 252 PMVYQLNEGQTLFFGGFARFDFLQGEHQSF--TCFISGRLGIHRTKLERADSLFAEHAGE 309
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
L PP ++R EL W ++++ + D+ +G+GW + + A + +
Sbjct: 310 LLSPPT-KERLEELPEWTRHEIRIPKGARQ----DVFISGIGWIKINGEHGALVAVHVPK 364
Query: 606 GIEITLREPLV 616
GI++ R L+
Sbjct: 365 GIKVLSRPSLI 375
>gi|417643756|ref|ZP_12293785.1| ribosome biogenesis GTPase YqeH [Staphylococcus warneri VCU121]
gi|445059504|ref|YP_007384908.1| GTPase YqeH [Staphylococcus warneri SG1]
gi|330685473|gb|EGG97127.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU121]
gi|443425561|gb|AGC90464.1| GTPase YqeH [Staphylococcus warneri SG1]
Length = 366
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 186/380 (48%), Gaps = 53/380 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NEV + + DF ++ + G+VV VVD DF
Sbjct: 33 EDVICKRCFRLKNY----NEVQDVGMDSDDFLNLLT------GLSDKKGIVVNVVDVFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++LV K+DLLP Q++ R+ W++ AK
Sbjct: 83 EGSFINAIKRIVGNK---------------KIILVANKMDLLPKQINHRRVKEWLKRAAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G+ +LL I + + +V+++G N GKSTLIN +
Sbjct: 128 KYGL-EAEDVVLISAEKGQGIEDLLYSINKYRD-QEDVYIVGTTNVGKSTLINKLIELSV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L K+ ++DTPG++ H M+ + E K++ +KE
Sbjct: 186 GEKDVVTTSRFPGTTLDMIDIP--LDEKSFMFDTPGIIQSHQMTHFVTEKELKLIMPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ GQ + GGL R+D + + S +++H K E A+E+WKNH+
Sbjct: 244 IKQRVYQLNEGQTLFFGGLARIDYVSGGKRPL--ICFFSNELNIHRTKTEKANELWKNHI 301
Query: 544 GIRLQPP-------IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
G L PP + + +A L T K+++ D+ +GLG+ + +
Sbjct: 302 GDLLTPPHDPSQFNMSEMKAVRLETGKEKR-------------DVMISGLGFIT--IDAG 346
Query: 597 ASLTLWTYDGIEITLREPLV 616
A + + +++ LR ++
Sbjct: 347 AKVIVRVPKNVDVILRNSIL 366
>gi|406670355|ref|ZP_11077607.1| ribosome biogenesis GTPase YqeH [Facklamia ignava CCUG 37419]
gi|405579662|gb|EKB53757.1| ribosome biogenesis GTPase YqeH [Facklamia ignava CCUG 37419]
Length = 369
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 180/369 (48%), Gaps = 41/369 (11%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC+ LR+Y N + D D + + + + +A V++VVD D +G
Sbjct: 42 CQRCYRLRHY---------NELIDLALDEDLFLQRLSSIASDDA-FVILVVDVFDVEG-- 89
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
S+ ++ +L + P V V K DLLP +++ WVR +
Sbjct: 90 ------SIISGIQ------RLIGEQPFAVAVN-KFDLLPKVTRQSKVKEWVRQIMNSNHL 136
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
V + + K G+ L+ I++ + N++++G N GKSTLIN + G +
Sbjct: 137 YP-ESVIITNGMKRSGIEALVELIEQYIHSK-NIYIVGITNVGKSTLINQLIQHYGGERE 194
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL +++I L + L DTPG++ + L+RDE K V K L+P+
Sbjct: 195 IITTSNHPGTTLDMIQIP--LTDEHSLIDTPGIIKKSQYAHYLSRDELKEVLPSKPLKPK 252
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++K Q + +GGL R+D+ + + VT++ + ++ +H K E A + ++ H+G L
Sbjct: 253 TYQLKSEQTLFLGGLARIDV-KTQADKAAVTLYVNSSLYIHRTKTEKASDFYEKHLGELL 311
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
PP ++ EL K + ++SG D+ +GLGW + +LT+W GI
Sbjct: 312 NPPHQKEDFPEL---KAQSYRLSGKE------DLNISGLGWITSN--APVNLTVWVPRGI 360
Query: 608 EITLREPLV 616
+T R ++
Sbjct: 361 AVTKRPSII 369
>gi|335429482|ref|ZP_08556380.1| GTPase YqeH [Haloplasma contractile SSD-17B]
gi|334889492|gb|EGM27777.1| GTPase YqeH [Haloplasma contractile SSD-17B]
Length = 369
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 180/371 (48%), Gaps = 42/371 (11%)
Query: 226 LSKAERKKKA----REAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATR 281
L + E K K + + ++K C RC L++Y N+V + + + DF +++
Sbjct: 12 LIQTEHKDKPGFTPKSSLEKKDNDIFCKRCFRLKHY----NDVQDVGLSNDDFLKILN-- 65
Query: 282 LMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTK 341
+ ++V V+D D G S+ + D L ++VG K
Sbjct: 66 ----EVSKEDALIVKVIDLADLTG--------SILTGINRLIGDNDL-------LIVGNK 106
Query: 342 VDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNV 401
DLLP ++ ++ W++ K G ++ V LVSA K +GV LL I+ R NV
Sbjct: 107 RDLLPKPINDNKIINWMKQSLKEYGMKPVDYV-LVSANKGIGVEELLNTIETHRRNR-NV 164
Query: 402 WVIGAQNAGKSTLINTFAKK-EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGL 460
+V+G+ N GKSTLIN K+ + +T + PGTTLGI+ I L + + DTPG+
Sbjct: 165 YVVGSTNVGKSTLINAIIKRFTEEEKDYITTSYFPGTTLGIIEIP--LTDEHNIIDTPGI 222
Query: 461 LHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVW 520
++ H + L++ + + E++P+ Y++ Q + GL R D + + +V +
Sbjct: 223 INKHQYAHYLDQKSLTHITPKNEIKPKVYQLNNEQTLFFDGLARFDFEDGPRSS-FVCYF 281
Query: 521 ASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGID 580
A+ V++H K+E AD++++NH+G L PP ++ LG ++ + K D
Sbjct: 282 AN-QVNIHRTKLEKADQLFENHLGKMLTPPTTEE-YKRLGGYRRQHFKTPSYKC-----D 334
Query: 581 IAAAGLGWFSL 591
+ +G GW ++
Sbjct: 335 LVISGYGWITI 345
>gi|295425298|ref|ZP_06818001.1| ribosome biogenesis GTPase YqeH [Lactobacillus amylolyticus DSM
11664]
gi|295065074|gb|EFG55979.1| ribosome biogenesis GTPase YqeH [Lactobacillus amylolyticus DSM
11664]
Length = 369
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 194/410 (47%), Gaps = 49/410 (11%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G + + + KK A KKA + + C RC LR+Y NE+
Sbjct: 8 IGCGAVLQS--DDPKKAGYLPAAALKKAEAGETDN---VYCQRCFRLRHY----NEIMPV 58
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ + DF ++ + K + +VV VVD DF + SL L+ D +
Sbjct: 59 DLNNDDFLALLNSLATKKA------LVVNVVDLFDF--------SNSLLASLKRFVGDNE 104
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA-KAGGAPKLNGVYLVSARKDLGVRN 386
+LVG K DL P +R+ W+R A + G P + ++L+SA + +
Sbjct: 105 F-------ILVGNKFDLFPLNSRQSRIKDWMRQEANRMGLYP--SKIFLISAARQKNLDE 155
Query: 387 LLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGG 446
L+ ++ + + R +++ +G N GKSTLIN K G +T + PGTTL RI
Sbjct: 156 LIEYLDQASQDR-DIYFVGMTNVGKSTLINAIIDKMGDIKDVITTSRFPGTTLD--RIEI 212
Query: 447 ILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLD 506
L L DTPG++ + ++ RLN + ++V +K ++P T+++ G + +GGL R+D
Sbjct: 213 PLENGHHLIDTPGIMSTNQLATRLNAADLEVVSPKKPIKPATFQLLPGNTIFLGGLGRID 272
Query: 507 LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRK 566
+ ++ TV+A+ V LH K NAD+ ++ HVG L PP G++ L K ++
Sbjct: 273 YLKG--QSTSFTVYAARGVKLHRTKTANADDFYQKHVGELLTPPTGENY---LPALKGQE 327
Query: 567 LKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
S D+ G+G+ + + + + +T D I + +R L+
Sbjct: 328 YHTDYKS------DLLFGGVGFVT--VPKDCVVKTYTPDKIGLGIRRALI 369
>gi|452975135|gb|EME74954.1| GTPase YqeH [Bacillus sonorensis L12]
Length = 366
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 186/383 (48%), Gaps = 41/383 (10%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A EA K +V +C RC L+NY NE+ + + D DF +++ G ++ ++
Sbjct: 24 APEASLLKDDV-ICQRCFRLKNY----NEIQDVSLTDDDF-----LKILHGIGETDS-LI 72
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
V +VD DF+G + + + ++L+G K D+LP V RL
Sbjct: 73 VKIVDIFDFNGSWINGLNRFVGGN---------------PILLIGNKADILPKSVKRERL 117
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
W++ AK G ++ V LVSA + G++ + I+ + +V+V+G N GKST
Sbjct: 118 VHWMKREAKELGLKPVD-VLLVSAGRGQGMKEAIEAIEHYRHGK-DVYVVGCTNVGKSTF 175
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN K+ + +T + PGTTL + I L + +YDTPG+++ H M+ + + +
Sbjct: 176 INRIIKEVSGEGDIITTSQYPGTTLDAIEIP--LDDGSSMYDTPGIINHHQMAHYVAKRD 233
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPN-VSLHLGKIE 533
K++ +KEL+PR +++ Q + GGL R D + V PN +++H K+E
Sbjct: 234 LKILTPKKELKPRNFQLNEQQTLFFGGLSRFDYISGGRSSF---VCYMPNELNIHRTKLE 290
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGL 593
NADE+++ H G L PP + EL T+ + L + D+ +GLGW ++
Sbjct: 291 NADELYEKHAGELLAPPAKE----ELDTFPE--LVKHTFTIKEPKTDVVFSGLGWVTVQ- 343
Query: 594 KGEASLTLWTYDGIEITLREPLV 616
+ G+ + +R L+
Sbjct: 344 GANQRIVAHAPKGVHVFVRRSLI 366
>gi|399516596|ref|ZP_10758193.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Leuconostoc pseudomesenteroides 4882]
gi|398648505|emb|CCJ66220.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Leuconostoc pseudomesenteroides 4882]
Length = 381
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 174/371 (46%), Gaps = 45/371 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+ + D DF RL+ + NA ++V V+D D G
Sbjct: 54 CKRCFRLRHY----NEIQPVELTDDDF-----ARLLHQISDTNA-LIVYVMDLFDMTG-- 101
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
E + + +++VG KVDLLP ++ RL +W++ KA G
Sbjct: 102 ------------SEIAGLPRFVGENNPILVVGNKVDLLPKLLNQNRLKQWLQTMLKAQGI 149
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
K ++L SA + LL + +L R +V+V+G N GKSTLIN K
Sbjct: 150 -KPADIFLTSAAHPKNIDALLERVDQLRLDR-DVYVVGVTNVGKSTLINQIIKSRTGVQD 207
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL RI L +L DTPG++ M+ + + K +KE++PR
Sbjct: 208 LITTSRFPGTTLD--RIEIPLADGHQLIDTPGIIKREQMAHVIADKDLKYALPKKEIKPR 265
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ Q + +GGL R D S E VT + N+++H K+ AD + HVG L
Sbjct: 266 TYQLNPEQTLFLGGLARFDF--VSGERTAVTAYFENNLNIHRTKLNGADAFYNRHVGELL 323
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL--GLKGEASLTLWTYD 605
P AS L R+ + S D+ AGLGW ++ G+K W +
Sbjct: 324 TPAPLNLTASPL---VKREFNIIEKS------DLVFAGLGWITVPAGIKVAG----WVPE 370
Query: 606 GIEITLREPLV 616
G+++ +R+ ++
Sbjct: 371 GVDVLIRKAMI 381
>gi|315038850|ref|YP_004032418.1| GTP-binding protein YqeH [Lactobacillus amylovorus GRL 1112]
gi|325957288|ref|YP_004292700.1| GTPase YqeH [Lactobacillus acidophilus 30SC]
gi|385818080|ref|YP_005854470.1| GTPase YqeH [Lactobacillus amylovorus GRL1118]
gi|312276983|gb|ADQ59623.1| GTP-binding protein YqeH [Lactobacillus amylovorus GRL 1112]
gi|325333853|gb|ADZ07761.1| GTPase YqeH [Lactobacillus acidophilus 30SC]
gi|327184018|gb|AEA32465.1| GTPase YqeH [Lactobacillus amylovorus GRL1118]
Length = 369
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 184/386 (47%), Gaps = 44/386 (11%)
Query: 232 KKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA 291
K +A+ E+ C RC LR+Y ++ + D + D +A + S +
Sbjct: 27 KSALDKARNEENAEVYCQRCFRLRHYNEI-------MPVDLNNDDFLA---LLNSLSEKK 76
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV VVD DF + S K+ D +LVG K DL P
Sbjct: 77 ALVVNVVDLFDF-----SNSLLSSLKRFVGGND----------FILVGNKFDLFPKNSRQ 121
Query: 352 TRLDRWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
+++ W+R A + G PK ++LVSA++ + + +L+A+I + + + +V+ +G N G
Sbjct: 122 SKIKDWMRQEANRMGLYPK--EIFLVSAKRKVNLESLIAYINKQSQDK-DVYFVGTTNVG 178
Query: 411 KSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRL 470
KSTLIN G + +T + PGTTL RI L L DTPG++ + ++ L
Sbjct: 179 KSTLINAIIDMMGDIQNLITTSRFPGTTLD--RIEIPLENGHFLIDTPGIMTDNQLATHL 236
Query: 471 NRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLG 530
N + +++ +K L+P TY++ G + + GL R+D + E+ TV+ + ++ +H
Sbjct: 237 NAKDLELISPKKPLKPATYQLMPGNTLFLAGLGRIDYLKG--ESTSFTVYVARDMYVHRT 294
Query: 531 KIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFS 590
K NAD ++ HVG L PP D+ L K ++ + S D+ G+G+ +
Sbjct: 295 KTANADAFYEKHVGELLAPPAKDDK---LPALKGQEYRTEYKS------DLLFGGIGFVT 345
Query: 591 LGLKGEASLTLWTYDGIEITLREPLV 616
+ + +T DGI + +R L+
Sbjct: 346 --VPEGCVVKTYTPDGIGLGIRRALI 369
>gi|421186412|ref|ZP_15643805.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB418]
gi|399967365|gb|EJO01847.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB418]
Length = 385
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 172/367 (46%), Gaps = 42/367 (11%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC L+NY Q+ E + D D + I T + + +V+ +VD D G
Sbjct: 58 LCERCFKLKNYNQI-----EPVAFDSDHFQKILTSI-----SDKKALVLYLVDLFDVGG- 106
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
S+ L + + VLVG K D+LP V ++ W+ AK G
Sbjct: 107 -------SMINGLTRFIGNNPV-------VLVGNKFDILPKSVKKNKIANWLTKEAKNEG 152
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
L V L + + D G + LL I + ++V+G N GKSTLIN K+ +
Sbjct: 153 IKVLKTVVLSADKGDSG-QYLLEEISDYIDEYEEIFVVGVTNVGKSTLINQIIKQISGRG 211
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
S +T + PGTTL + I L K ++ DTPG++H M+ ++ + K + KE++
Sbjct: 212 SVITTSRFPGTTLDKIEIP--LTEKTRVIDTPGIIHDSQMAHFIDSKDFKYLLPNKEVKA 269
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
RT ++ GQA+ + GL +D S I VT + N+ LH GKIENA++++ + G
Sbjct: 270 RTLQLSKGQAIFLAGLGWIDFLNKS--KISVTAYFENNIELHRGKIENAEKLFSSQAGRL 327
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L+P + E + +++K+ D A +GLGWF+ A + G
Sbjct: 328 LKPTV----LKEYRELEKKEIKLKANQ------DFAISGLGWFT--FHDSAPICFHLPKG 375
Query: 607 IEITLRE 613
+ ++R+
Sbjct: 376 LAFSVRQ 382
>gi|404328442|ref|ZP_10968890.1| GTPase YqeH [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 366
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 188/381 (49%), Gaps = 44/381 (11%)
Query: 238 AQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMV 297
A + + +C RC L++Y NEV + + DF ++++ + SG G+VV +
Sbjct: 26 ASALRHDPVICRRCFRLQHY----NEVQDVPMTGDDFLKLLS----QISGRK--GLVVYL 75
Query: 298 VDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
VD DF G S L+ + + ++VG K+DLLP +P +L W
Sbjct: 76 VDIFDFSG--------SWVPGLQRFVGNNPV-------LMVGNKLDLLPKSTNPNKLTSW 120
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRG--NVWVIGAQNAGKSTLI 415
+R AK G L+ V L+SA K++G+ + I+E+ R +++V+G N GKST I
Sbjct: 121 LRRSAKELGLRPLD-VLLMSAEKNMGIDQV---IEEMNDYRKGKDIYVVGVTNVGKSTFI 176
Query: 416 NTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQ 475
N + G + +T + PGTTL IG L LYDTPG+++ H + ++ +
Sbjct: 177 NHLIRAVGQQEGTITTSHFPGTTLDF--IGIPLDDGQMLYDTPGIVNLHQAAHFISEKDY 234
Query: 476 KMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENA 535
+ V +E++P +++ GQ + +GG+ R+D ++ V+ S +++H + ++A
Sbjct: 235 RQVMPTREIKPVVFQLNEGQTLFLGGMGRIDYIGPGRRSL--IVYTSNRLTVHRTRTDHA 292
Query: 536 DEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKG 595
D+++ G L PP R L K + G + DI +GLGW ++ +G
Sbjct: 293 DDLFHRQYGQLLSPP---SRTRGLPELKSYDFRTDGLN-----TDIVFSGLGWVTVKGRG 344
Query: 596 EASLTLWTYDGIEITLREPLV 616
A + ++ + I ++ R ++
Sbjct: 345 -AQIHVFAPESISVSRRTSII 364
>gi|452994694|emb|CCQ93697.1| GTPase involved in ribosome 30S assembly [Clostridium ultunense
Esp]
Length = 385
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 187/374 (50%), Gaps = 38/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E VC RC +++Y NE + + + DF +V+ S + +VV +VD +D
Sbjct: 49 EEAVCLRCFRIKHY----NEAVQVDLREEDFLQVLH------SIGSTEALVVHLVDLIDV 98
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + +LVG K+DLLP +V+ R+ RW+ A+
Sbjct: 99 NGTLLSGLHRFIGQN---------------PFLLVGNKLDLLPQRVNLDRIRRWLLMMAR 143
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V L+SA K ++ LL ++ + NV+ IGA N GKST +N K+ G
Sbjct: 144 EWGLKPVD-VMLISALKGSYLQELLEKLEAYRKGK-NVYFIGATNVGKSTFMNRLLKEYG 201
Query: 424 VKVS-KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
K + ++T + PGTTL ++ I + + YDTPG++ PH + L+ ++ K V +K
Sbjct: 202 EKGTIEITTSRFPGTTLDLIEIP--VDEHSSFYDTPGVMTPHQIIRYLSPEDLKKVIPQK 259
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
+ P+ Y+++ Q + +GG+ R+D + ++ V+ S + +H K +A E+ + H
Sbjct: 260 RINPKVYQLEPEQTLFLGGMARIDFISGTPQSF--IVYISNEIPVHRTKRSHAGELQEKH 317
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP G++ L W +K S + DIA +GLGW S K + + ++
Sbjct: 318 RGELLSPP-GKENLDRLPPW----VKHSFNLKEGEKQDIAISGLGWVSFSGK-KGRVDVF 371
Query: 603 TYDGIEITLREPLV 616
G+ + +R+ ++
Sbjct: 372 APKGVSVQIRKGMI 385
>gi|330719333|ref|ZP_08313933.1| GTPase YqeH [Leuconostoc fallax KCTC 3537]
Length = 379
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 170/370 (45%), Gaps = 43/370 (11%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC LR+Y NE+ + D DF R++ +A +VV V+D D G
Sbjct: 53 LCQRCFRLRHY----NEIQPVELTDDDFARLLH------QISATRALVVYVIDVFDVTG- 101
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
S+ L + + P LV V KVDLLP ++ RL +W++ K G
Sbjct: 102 -------SIISGLPRF-----VGQNNPILV-VANKVDLLPKSLNKQRLKQWLQGVLKEQG 148
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
++ +L SA+K + LL I EL +V+V+G N GKSTLIN K
Sbjct: 149 IQAVD-TFLTSAKKPQNLDELLEKIDELRLGE-DVYVVGVTNVGKSTLINRIIKSRTGIQ 206
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+T + PGTTL RI L A+L DTPG++ M+ L+ + K E++P
Sbjct: 207 ELITTSRFPGTTLD--RIEIPLDDGAQLVDTPGIVKRDQMAHALSEKDLKFALPNHEIKP 264
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
+TY++ Q + +GGL R D + E VT + N+ LH K+ NAD + H G
Sbjct: 265 KTYQLNAEQTIFIGGLARFDF--VNGERAAVTAYFENNLMLHRTKLANADAFYDKHAGNL 322
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
LQP Q T + + S S D+ AGLGW + + + W G
Sbjct: 323 LQPIPAQG-----NTLVMHEFRTSEKS------DLVFAGLGWIT--VPAGMHIRGWAPAG 369
Query: 607 IEITLREPLV 616
+ + +R+ ++
Sbjct: 370 VNVLIRKAMI 379
>gi|339481026|ref|ZP_08656685.1| GTPase YqeH [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 381
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 169/371 (45%), Gaps = 45/371 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+ + D DF R++ + ++V VVD D G
Sbjct: 54 CQRCFRLRHY----NEIQPVELTDDDFARLLH------QISETKALIVYVVDLFDVTG-- 101
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
E + +++VG KVDLLP + RL +W++ K G
Sbjct: 102 ------------SEIAGLPRFVGDNNPILVVGNKVDLLPKLLKQNRLKQWLQAMLKTQGI 149
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
K ++L SA + LL I +L R +V+V+G N GKSTLIN K
Sbjct: 150 -KPADIFLTSAAHPKNLDELLECIDQLRHDR-DVYVVGVTNVGKSTLINQIIKSRTGVQD 207
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL RI L +L DTPG++ M+ + + K +KE++PR
Sbjct: 208 LITTSRFPGTTLD--RIEIPLADGHQLIDTPGIIKREQMAHVIADKDLKYALPKKEIKPR 265
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ Q + +GGL R D S E VT + N+++H K+ ADE + HVG L
Sbjct: 266 TYQLNPEQTLFLGGLARFDF--LSGERTAVTAYFENNLNIHRTKLNGADEFYNRHVGELL 323
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL--GLKGEASLTLWTYD 605
P S L R+ + S D+ AGLGW +L G+K W +
Sbjct: 324 TPAPLNLTTSPL---VKREFNIIEKS------DLVFAGLGWITLPAGIKVAG----WVPE 370
Query: 606 GIEITLREPLV 616
G+++ +R+ ++
Sbjct: 371 GVDVLIRKAMI 381
>gi|384550424|ref|YP_005739676.1| GTPase family protein [Staphylococcus aureus subsp. aureus JKD6159]
gi|302333273|gb|ADL23466.1| GTPase family protein [Staphylococcus aureus subsp. aureus JKD6159]
Length = 366
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 178/350 (50%), Gaps = 43/350 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN +
Sbjct: 129 YGL-EAEDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLIEAS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D + + S ++++H K ENA+++W+N
Sbjct: 243 EIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTENANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+G L PP G + +L K +L+ DV +GLG+ ++G
Sbjct: 301 LGDLLTPP-GNPQNFDLNEVKAVRLETGKEKRDV-----MISGLGFITIG 344
>gi|395243805|ref|ZP_10420784.1| Ribosome biogenesis GTPase YqeH [Lactobacillus hominis CRBIP
24.179]
gi|394483855|emb|CCI81792.1| Ribosome biogenesis GTPase YqeH [Lactobacillus hominis CRBIP
24.179]
Length = 370
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 181/382 (47%), Gaps = 44/382 (11%)
Query: 236 REAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVV 295
++A ++G C RC LR+Y ++ V+EN + DF L+ + A +VV
Sbjct: 32 KKALNDEGSDVYCQRCFRLRHYNEIM-PVSEN---NDDF-----LALLNSIADKKA-LVV 81
Query: 296 MVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLD 355
VVD DF + SL L+ + +LVG KVDL P T++
Sbjct: 82 NVVDLFDF--------SNSLISSLKRFIGGNEY-------ILVGNKVDLFPKNSKETKIK 126
Query: 356 RWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLI 415
W+R A G K ++LVSA K + L+ FI + G + +++ +G N GKSTLI
Sbjct: 127 DWMRQEANRNGL-KPEKIFLVSAAKKKNLDELINFIAK-KGKKKDIYFVGTTNVGKSTLI 184
Query: 416 NTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQ 475
N + +T + PGTTL ++I L L DTPG+L ++ L E
Sbjct: 185 NAILSERSDLKDLITTSKFPGTTLDEIKIP--LDNGHYLIDTPGILSKKQLASHLTGKEL 242
Query: 476 KMVEIRKELQPRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIEN 534
++VE +K L+P TY++ GQ + + GL R D +D S T++ + ++ +H K EN
Sbjct: 243 EVVEPKKPLKPATYQLLPGQTIFLAGLGRFDYIDGPSAG---FTLYVARDLYVHRTKTEN 299
Query: 535 ADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
AD+ ++ H L PP +D +LG K + S DV DI G+G+ +
Sbjct: 300 ADQFYEKHKKDLLLPPSEKD---DLGLLKGQTF-----SPDVKS-DILFGGVGFIT--TP 348
Query: 595 GEASLTLWTYDGIEITLREPLV 616
+ +T D I + +R L+
Sbjct: 349 ANVVVKAYTPDAIGLGIRRALI 370
>gi|417797344|ref|ZP_12444540.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21305]
gi|334266836|gb|EGL85306.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21305]
Length = 366
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 178/350 (50%), Gaps = 43/350 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLIEAS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D + + S ++++H K E A+++W+N
Sbjct: 243 EIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+G L PP G + +L K +LK DV +GLG+ ++G
Sbjct: 301 LGDLLTPP-GNPQNFDLNEVKAVRLKTGKEKRDV-----MISGLGFITIG 344
>gi|295693368|ref|YP_003601978.1| GTP-binding protein [Lactobacillus crispatus ST1]
gi|295031474|emb|CBL50953.1| GTP-binding protein [Lactobacillus crispatus ST1]
Length = 369
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 182/386 (47%), Gaps = 44/386 (11%)
Query: 232 KKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA 291
K +A+ E+ C RC LR+Y ++ + D + D +A + S +
Sbjct: 27 KSALDKAKSEENTDVYCQRCFRLRHYNEI-------MPVDLNNDDFLA---LLNSLSEKK 76
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV VVD DF + SL L+ + +LVG K DL P
Sbjct: 77 ALVVNVVDLFDF--------SNSLLSSLKRFVGNNDF-------ILVGNKFDLFPKNSRQ 121
Query: 352 TRLDRWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
+++ W+R A + G PK ++LVSA++ + + +L+A+I + + + +V+ +G N G
Sbjct: 122 SKIKDWMRQEANRMGLYPK--EIFLVSAKRKVNLESLIAYINKQSQDK-DVYFVGTTNVG 178
Query: 411 KSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRL 470
KSTLIN G +T + PGTTL RI L L DTPG++ + ++ L
Sbjct: 179 KSTLINAIIDMMGDIQDLITTSRFPGTTLD--RIEIPLENGHFLIDTPGIMTDNQLATHL 236
Query: 471 NRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLG 530
N +++ +K L+P TY++ G + + GL R+D + E+ TV+ + + +H
Sbjct: 237 NAKNLELISPKKPLKPATYQLMPGNTLFLAGLGRIDYLKG--ESTSFTVYVARGMYVHRT 294
Query: 531 KIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFS 590
K NAD ++ HVG L PP D+ L K ++ + S D+ G+G+ +
Sbjct: 295 KTANADAFYEKHVGELLAPPAKDDK---LPALKGQEYRTEYKS------DLLFGGIGFVT 345
Query: 591 LGLKGEASLTLWTYDGIEITLREPLV 616
+ + +T DGI + +R L+
Sbjct: 346 --VPEGCVVKTYTPDGIGLGIRRALI 369
>gi|418645090|ref|ZP_13207218.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-55]
gi|375023923|gb|EHS17368.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-55]
Length = 366
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 189/374 (50%), Gaps = 45/374 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSI---ANIRDNEDVYIVGTTNVGKSTLINKLIEAS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDESSFMYDTPGIIQDHQMTHLVSEKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D + + S ++++H K+E A+++W+N
Sbjct: 243 EIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKMEKANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
+G L PP G + +L K +L+ DV +GLG+ ++G A + +
Sbjct: 301 LGDLLTPP-GNPQNFDLNEIKAVRLETGKEKRDV-----MISGLGFITIG--PGAKVIVR 352
Query: 603 TYDGIEITLREPLV 616
+++ LR ++
Sbjct: 353 VPKNVDVVLRNSIL 366
>gi|326693253|ref|ZP_08230258.1| GTPase YqeH [Leuconostoc argentinum KCTC 3773]
Length = 379
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 172/371 (46%), Gaps = 45/371 (12%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC LR+Y NE+ + D DF A+ L + S ++V V+D D G
Sbjct: 53 LCQRCFRLRHY----NEIQPVELTDDDF----ASLLHQISDTR--ALIVYVIDVFDVTG- 101
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
E + + +++V KVDLLP ++ RL W++ KA G
Sbjct: 102 -------------SEISSLPRFVGQDNPILVVANKVDLLPKLLNKNRLKNWLQAELKAQG 148
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE-GVK 425
++ ++L SA + LLA I EL R +V+V+G N GKSTLIN K GVK
Sbjct: 149 IKPVD-IFLTSATHPQNLDALLAEIDELRAGR-DVFVVGVTNVGKSTLINQIIKTSTGVK 206
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
+T + PGTTL RI L L DTPG++ ++ L+ + K + E++
Sbjct: 207 -DLITTSRFPGTTLD--RIEIPLSDGKHLIDTPGIIKRDQIAHVLSDKDLKYALPKNEIK 263
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
PRTY++ Q + +GGL R D + S E T + N++LH K+ AD ++ HVG
Sbjct: 264 PRTYQLNPEQTLFIGGLARFDFE--SGERASFTAYFENNLNLHRTKLAGADAFYEKHVGT 321
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
L P A+ L V T DI AGLGW S + ++ W
Sbjct: 322 LLTP--APKTATPL---------VKHTFKTTEKSDIVFAGLGWIS--VPAGVQVSGWAPQ 368
Query: 606 GIEITLREPLV 616
G+ + +R+ ++
Sbjct: 369 GVSVLIRKAMI 379
>gi|169350470|ref|ZP_02867408.1| hypothetical protein CLOSPI_01238 [Clostridium spiroforme DSM 1552]
gi|169292790|gb|EDS74923.1| ribosome biogenesis GTPase YqeH [Clostridium spiroforme DSM 1552]
Length = 365
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 186/372 (50%), Gaps = 42/372 (11%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
+C RC L+NY +++ NL D DF +++ GN + +VV ++D D++G
Sbjct: 35 VLCKRCFRLKNYHELQ---KTNLTSD-DF-----LNILQEIGNHDC-LVVYLIDLFDYNG 84
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
SL L ++ + ++VG K D+LP + ++ W+R + K
Sbjct: 85 --------SLINGLPRHLNNNDI-------LVVGNKRDILPKSLKDIKIIHWLRRQLKET 129
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G ++ V L S K+ + L+ I E R +V+++G N GKS+LIN K G
Sbjct: 130 GIKPVD-VILSSGVKNYNLDLLINKINEYRHGR-DVYIVGVTNVGKSSLINALLKHYGTG 187
Query: 426 VSKL-TEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKEL 484
+ L T + PGTTL ++ I L + LYD+PG+++PH M+ + ++ K + + EL
Sbjct: 188 DNNLITTSEFPGTTLDLIEIA--LDDHSYLYDSPGIINPHQMAHLVKDEDLKTIIPKNEL 245
Query: 485 QPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+P Y++ Q+++ GGL R D + + + T + ++ +H K+EN+D ++ H
Sbjct: 246 KPINYQLDSNQSLYFGGLARFDFIKGNHSSF--TCYFPKSLKIHRTKLENSDGLYNRH-- 301
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
+ L+P I + + + D KL ++ V D+ +GLG+ S+ A + +
Sbjct: 302 LTLKPEIEEIKDIKDMVAYDFKL----PNYKV---DLVISGLGFVSVNC-ANAKVKIHVP 353
Query: 605 DGIEITLREPLV 616
G+ + +RE L+
Sbjct: 354 KGVGVFIREALI 365
>gi|116490944|ref|YP_810488.1| GTP-binding protein YqeH [Oenococcus oeni PSU-1]
gi|290890418|ref|ZP_06553493.1| hypothetical protein AWRIB429_0883 [Oenococcus oeni AWRIB429]
gi|419758907|ref|ZP_14285219.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB304]
gi|419857813|ref|ZP_14380516.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB202]
gi|421185344|ref|ZP_15642755.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB318]
gi|421188821|ref|ZP_15646153.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB419]
gi|421189610|ref|ZP_15646924.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB422]
gi|421190931|ref|ZP_15648215.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB548]
gi|421195410|ref|ZP_15652618.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB568]
gi|421197523|ref|ZP_15654698.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB576]
gi|116091669|gb|ABJ56823.1| Predicted GTPase [Oenococcus oeni PSU-1]
gi|290479814|gb|EFD88463.1| hypothetical protein AWRIB429_0883 [Oenococcus oeni AWRIB429]
gi|399904362|gb|EJN91818.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB304]
gi|399964154|gb|EJN98808.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB419]
gi|399964525|gb|EJN99166.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB318]
gi|399972700|gb|EJO06899.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB422]
gi|399973627|gb|EJO07792.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB548]
gi|399975132|gb|EJO09200.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB576]
gi|399975835|gb|EJO09870.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB568]
gi|410497284|gb|EKP88759.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB202]
Length = 385
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 163/345 (47%), Gaps = 40/345 (11%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC L+NY Q+ E + D D + I T + + +V+ +VD D G
Sbjct: 58 LCERCFKLKNYNQI-----EPVAFDSDHFQKILTSI-----SDKKALVLYLVDLFDVGG- 106
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
S+ L + + VLVG K D+LP V ++ W+ AK G
Sbjct: 107 -------SMINGLTRFIGNNPV-------VLVGNKFDILPKSVKKNKIANWLTKEAKNEG 152
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
L V L + + D G + LL I + ++V+G N GKSTLIN K+ +
Sbjct: 153 IKVLKTVVLSADKGDSG-QYLLEEISDYIDEYEEIFVVGVTNVGKSTLINQIIKQISGRG 211
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
S +T + PGTTL + I L K ++ DTPG++H M+ ++ + K + KE++
Sbjct: 212 SVITTSRFPGTTLDKIEIP--LTEKTRVIDTPGIIHDSQMAHFIDSKDFKYLLPNKEVKA 269
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
T ++ GQA+ + GL +D S I VT + N+ LH GKIENA++++ + G
Sbjct: 270 GTLQLSKGQAIFLAGLGWIDFLNKS--KISVTAYFENNIELHRGKIENAEKLFSSQAGRL 327
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
L+P + E + +++K+ D A AGLGWF+
Sbjct: 328 LKPTV----LKEYRELEKKEIKLKANQ------DFAIAGLGWFTF 362
>gi|300173713|ref|YP_003772879.1| GTP-binding protein yqeH [Leuconostoc gasicomitatum LMG 18811]
gi|333447983|ref|ZP_08482925.1| GTPase YqeH [Leuconostoc inhae KCTC 3774]
gi|299888092|emb|CBL92060.1| GTP-binding protein yqeH [Leuconostoc gasicomitatum LMG 18811]
Length = 382
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 189/412 (45%), Gaps = 54/412 (13%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G + + +V+ SK L + KK E +C RC LR+Y NE+
Sbjct: 22 IGCGAVMQ-VVDSSKAGYLPMSALKKSI------DSEELLCQRCFKLRHY----NEIQPV 70
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ D DF +RL+ +A A ++V V+D D G E +
Sbjct: 71 ELTDDDF-----SRLLHQISDAKA-LIVYVIDVFDVTG--------------SEIAGLPR 110
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNL 387
+ +++V KVDLLP ++ RL W++ KA G ++ ++L SA + +L
Sbjct: 111 FVGQDNPILVVANKVDLLPKLLNKNRLKNWLQVELKAQGIKPVD-IFLTSATHPKNLDDL 169
Query: 388 LAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKL-TEAPIPGTTLGILRIGG 446
L I R +V+V+G N GKSTLIN K G V L T + PGTTL RI
Sbjct: 170 LDTIDNYREGR-DVYVVGVTNVGKSTLINQIIK-SGTGVQDLITTSRFPGTTLD--RIEI 225
Query: 447 ILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLD 506
L +L DTPG++ ++ L + K + E++PRTY++ Q + +GGL R D
Sbjct: 226 PLADGRQLIDTPGIVKRDQITHVLADKDLKYALPKNEIKPRTYQLNAEQTIFIGGLARFD 285
Query: 507 LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRK 566
+ E +T + N+SLH K+ AD+ + H G L P + S + +
Sbjct: 286 FELG--ERTPITAYFENNLSLHRTKLIGADDFYDKHAGELLTP---SPQESTITNLIRHE 340
Query: 567 LKVSGTSWDVNGIDIAAAGLGWFSL--GLKGEASLTLWTYDGIEITLREPLV 616
++ S DI AGLGW S+ G+K + W G+ + +R+ ++
Sbjct: 341 FNITEKS------DIVFAGLGWISIPAGIK----IAGWAPQGVSVLIRKAMI 382
>gi|257425721|ref|ZP_05602145.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428382|ref|ZP_05604780.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257431019|ref|ZP_05607399.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
68-397]
gi|257433707|ref|ZP_05610065.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
E1410]
gi|257436621|ref|ZP_05612665.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus M876]
gi|282911234|ref|ZP_06319036.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282914403|ref|ZP_06322189.1| GTP-binding protein [Staphylococcus aureus subsp. aureus M899]
gi|282924697|ref|ZP_06332365.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C101]
gi|293503477|ref|ZP_06667324.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510494|ref|ZP_06669200.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus M809]
gi|293531034|ref|ZP_06671716.1| GTP-binding protein [Staphylococcus aureus subsp. aureus M1015]
gi|384867430|ref|YP_005747626.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus TCH60]
gi|257271415|gb|EEV03561.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275223|gb|EEV06710.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257278449|gb|EEV09085.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
68-397]
gi|257281800|gb|EEV11937.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
E1410]
gi|257283972|gb|EEV14095.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus M876]
gi|282313532|gb|EFB43927.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C101]
gi|282321584|gb|EFB51909.1| GTP-binding protein [Staphylococcus aureus subsp. aureus M899]
gi|282324929|gb|EFB55239.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus WBG10049]
gi|290920302|gb|EFD97368.1| GTP-binding protein [Staphylococcus aureus subsp. aureus M1015]
gi|291095143|gb|EFE25408.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466858|gb|EFF09378.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus M809]
gi|312437935|gb|ADQ77006.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus TCH60]
Length = 366
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 180/353 (50%), Gaps = 43/353 (12%)
Query: 243 GEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCV 301
G+ +C RC L+NY NEV + + DF +++ SG A+ G+VV VVD
Sbjct: 32 GDDVICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVF 80
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DF+G F + + K K++L K+DLLP Q++ R+ W++
Sbjct: 81 DFEGSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRT 125
Query: 362 AKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFA 419
A+ G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN
Sbjct: 126 ARKYGL-EADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLI 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
+ + +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++
Sbjct: 182 EASVGEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKELKIIM 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++ R Y++ Q + GGL R+D + + S ++++H K E A+++W
Sbjct: 240 PKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--ICFFSNDLNIHRTKTEKANDLW 297
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+N +G L PP G + +L K +L+ DV +GLG+ ++G
Sbjct: 298 RNQLGDLLTPP-GNPQNFDLNEVKAVRLETGKEKRDV-----MISGLGFITIG 344
>gi|419859605|ref|ZP_14382259.1| GTP-binding protein YqeH [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410496622|gb|EKP88105.1| GTP-binding protein YqeH [Oenococcus oeni DSM 20252 = AWRIB129]
Length = 385
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 163/345 (47%), Gaps = 40/345 (11%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC L+NY Q+ E + D D + I T + + +V+ +VD D G
Sbjct: 58 LCERCFKLKNYNQI-----EPVAFDSDHFQKILTSI-----SDKKALVLYLVDLFDVGG- 106
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
S+ L + + VLVG K D+LP V ++ W+ AK G
Sbjct: 107 -------SMINGLTRFIGNNPV-------VLVGNKFDILPKSVKKNKIANWLTKEAKNEG 152
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
L V L + + D G + LL I + ++V+G N GKSTLIN K+ +
Sbjct: 153 IKVLKTVVLSADKGDSG-QYLLEEISDYIDEYEEIFVVGVTNVGKSTLINQIIKQISGRG 211
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
S +T + PGTTL + I L K ++ DTPG++H M+ ++ + K + KE++
Sbjct: 212 SVITTSRFPGTTLDKIEIP--LTEKTRVIDTPGIIHDSQMAHFIDSKDFKYLLPNKEVKA 269
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
T ++ GQA+ + GL +D S I VT + N+ LH GKIENA++++ + G
Sbjct: 270 GTLQLSKGQAIFLAGLGWIDFLNKS--KISVTAYFENNIELHRGKIENAEKLFSSQAGRL 327
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
L+P + E + +++K+ D A AGLGWF+
Sbjct: 328 LKPTV----LKEYRELEKKEIKLKSNQ------DFAIAGLGWFTF 362
>gi|282919372|ref|ZP_06327107.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C427]
gi|417887990|ref|ZP_12532109.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21195]
gi|282317182|gb|EFB47556.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C427]
gi|341857019|gb|EGS97846.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21195]
Length = 366
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 182/360 (50%), Gaps = 57/360 (15%)
Query: 243 GEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCV 301
G+ +C RC L+NY NEV + + DF +++ SG A+ G+VV VVD
Sbjct: 32 GDDVICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVF 80
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DF+G F + + K K++L K+DLLP Q++ R+ W++
Sbjct: 81 DFEGSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRT 125
Query: 362 AKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFA 419
A+ G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN
Sbjct: 126 ARKYGL-EADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLI 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
+ + +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++
Sbjct: 182 EASVGEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKELKIIM 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++ R Y++ Q + GGL R+D + + S ++++H K E A+++W
Sbjct: 240 PKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--ICFFSNDLNIHRTKTEKANDLW 297
Query: 540 KNHVGIRLQPP-------IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+N +G L PP + + +A L T K+++ D+ +GLG+ ++G
Sbjct: 298 RNQLGDLLTPPGNLQNFDLNEVKAVRLETGKEKR-------------DVMISGLGFITIG 344
>gi|418318528|ref|ZP_12929930.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21232]
gi|365242991|gb|EHM83686.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21232]
Length = 366
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 178/350 (50%), Gaps = 43/350 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLIEAS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D + + S ++++H K E A+++W+N
Sbjct: 243 EIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+G L PP G + +L K +L+ DV +GLG+ ++G
Sbjct: 301 LGDLLTPP-GNSQNFDLNEVKAVRLETGKEKRDV-----MISGLGFITIG 344
>gi|15924587|ref|NP_372121.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus Mu50]
gi|15927177|ref|NP_374710.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus N315]
gi|148268080|ref|YP_001247023.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus JH9]
gi|150394149|ref|YP_001316824.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus JH1]
gi|156979915|ref|YP_001442174.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus Mu3]
gi|253315366|ref|ZP_04838579.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255006382|ref|ZP_05144983.2| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257793673|ref|ZP_05642652.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9781]
gi|258411028|ref|ZP_05681308.1| nitric oxide synthase [Staphylococcus aureus A9763]
gi|258420169|ref|ZP_05683124.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9719]
gi|258437428|ref|ZP_05689412.1| nitric-oxide synthase [Staphylococcus aureus A9299]
gi|258443634|ref|ZP_05691973.1| GTP-binding protein YqeH [Staphylococcus aureus A8115]
gi|258446842|ref|ZP_05694996.1| nitric-oxide synthase [Staphylococcus aureus A6300]
gi|258448756|ref|ZP_05696868.1| nitric-oxide synthase [Staphylococcus aureus A6224]
gi|258453573|ref|ZP_05701551.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A5937]
gi|269203224|ref|YP_003282493.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus ED98]
gi|282893098|ref|ZP_06301332.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8117]
gi|282928230|ref|ZP_06335835.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A10102]
gi|295406720|ref|ZP_06816525.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8819]
gi|296276599|ref|ZP_06859106.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus MR1]
gi|297245698|ref|ZP_06929563.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8796]
gi|384864817|ref|YP_005750176.1| GTPase [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|387150740|ref|YP_005742304.1| GTP-binding protein YqeH, possibly involved in replication
initiation [Staphylococcus aureus 04-02981]
gi|417650984|ref|ZP_12300747.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21172]
gi|417802923|ref|ZP_12449973.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21318]
gi|417894287|ref|ZP_12538306.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21201]
gi|418424745|ref|ZP_12997859.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS1]
gi|418427739|ref|ZP_13000744.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS2]
gi|418430582|ref|ZP_13003492.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS3a]
gi|418433724|ref|ZP_13006316.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS4]
gi|418437219|ref|ZP_13009015.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS5]
gi|418440119|ref|ZP_13011820.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS6]
gi|418443137|ref|ZP_13014736.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS7]
gi|418446201|ref|ZP_13017674.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS8]
gi|418449215|ref|ZP_13020600.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS9]
gi|418452026|ref|ZP_13023360.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS10]
gi|418455020|ref|ZP_13026279.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457898|ref|ZP_13029097.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418567012|ref|ZP_13131377.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21272]
gi|418640343|ref|ZP_13202575.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-3]
gi|418652879|ref|ZP_13214842.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-99]
gi|418660818|ref|ZP_13222430.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-122]
gi|418878514|ref|ZP_13432749.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418881280|ref|ZP_13435497.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418884129|ref|ZP_13438322.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418886861|ref|ZP_13441009.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418895359|ref|ZP_13449454.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418914698|ref|ZP_13468669.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418920677|ref|ZP_13474609.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418931901|ref|ZP_13485736.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418991524|ref|ZP_13539185.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1096]
gi|419784691|ref|ZP_14310454.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-M]
gi|424768942|ref|ZP_18196179.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CM05]
gi|443637575|ref|ZP_21121650.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21236]
gi|13701395|dbj|BAB42689.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247368|dbj|BAB57759.1| similar to GTPase family protein [Staphylococcus aureus subsp.
aureus Mu50]
gi|147741149|gb|ABQ49447.1| Nitric-oxide synthase [Staphylococcus aureus subsp. aureus JH9]
gi|149946601|gb|ABR52537.1| Nitric-oxide synthase [Staphylococcus aureus subsp. aureus JH1]
gi|156722050|dbj|BAF78467.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|257787645|gb|EEV25985.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9781]
gi|257840178|gb|EEV64642.1| nitric oxide synthase [Staphylococcus aureus A9763]
gi|257843880|gb|EEV68274.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9719]
gi|257848633|gb|EEV72621.1| nitric-oxide synthase [Staphylococcus aureus A9299]
gi|257851040|gb|EEV74983.1| GTP-binding protein YqeH [Staphylococcus aureus A8115]
gi|257854417|gb|EEV77366.1| nitric-oxide synthase [Staphylococcus aureus A6300]
gi|257858034|gb|EEV80923.1| nitric-oxide synthase [Staphylococcus aureus A6224]
gi|257864304|gb|EEV87054.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A5937]
gi|262075514|gb|ACY11487.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus ED98]
gi|282590037|gb|EFB95119.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A10102]
gi|282764416|gb|EFC04542.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8117]
gi|285817279|gb|ADC37766.1| GTP-binding protein YqeH, possibly involved in replication
initiation [Staphylococcus aureus 04-02981]
gi|294968467|gb|EFG44491.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8819]
gi|297177349|gb|EFH36601.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A8796]
gi|312829984|emb|CBX34826.1| GTPase of unknown function family protein [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|329727168|gb|EGG63624.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21172]
gi|334273571|gb|EGL91914.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21318]
gi|341852432|gb|EGS93321.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21201]
gi|371982716|gb|EHO99864.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21272]
gi|375014907|gb|EHS08578.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-3]
gi|375021047|gb|EHS14554.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-99]
gi|375040058|gb|EHS32964.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-122]
gi|377694636|gb|EHT19001.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377695165|gb|EHT19529.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377713079|gb|EHT37292.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377714464|gb|EHT38665.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377723646|gb|EHT47771.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377725814|gb|EHT49927.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377731023|gb|EHT55081.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377757024|gb|EHT80920.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377764403|gb|EHT88256.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC348]
gi|383363901|gb|EID41227.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-M]
gi|387718027|gb|EIK06022.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS2]
gi|387718094|gb|EIK06088.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS3a]
gi|387719524|gb|EIK07469.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS1]
gi|387724948|gb|EIK12579.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS4]
gi|387727207|gb|EIK14739.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS5]
gi|387730269|gb|EIK17676.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS6]
gi|387735133|gb|EIK22270.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS8]
gi|387736495|gb|EIK23586.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus VRS9]
gi|387736813|gb|EIK23901.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VRS7]
gi|387744907|gb|EIK31671.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS10]
gi|387745073|gb|EIK31835.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387746666|gb|EIK33395.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
VRS11b]
gi|402348333|gb|EJU83325.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CM05]
gi|408423710|emb|CCJ11121.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408425700|emb|CCJ13087.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408427687|emb|CCJ15050.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408429676|emb|CCJ26841.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408431663|emb|CCJ18978.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408433657|emb|CCJ20942.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408435649|emb|CCJ22909.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408437633|emb|CCJ24876.1| Similar to GTPase family protein [Staphylococcus aureus subsp.
aureus ST228]
gi|443405358|gb|ELS63962.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21236]
Length = 366
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 178/350 (50%), Gaps = 43/350 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLIEAS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDESSFMYDTPGIIQDHQMTHLVSEKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D + + S ++++H K E A+++W+N
Sbjct: 243 EIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+G L PP G + +L K +L+ DV +GLG+ ++G
Sbjct: 301 LGDLLTPP-GNPQNFDLNELKAVRLETGKEKRDV-----MISGLGFITIG 344
>gi|418321301|ref|ZP_12932647.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VCU006]
gi|418875536|ref|ZP_13429792.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC93]
gi|421148523|ref|ZP_15608183.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443639852|ref|ZP_21123852.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21196]
gi|365225533|gb|EHM66776.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus VCU006]
gi|377769608|gb|EHT93376.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC93]
gi|394331666|gb|EJE57749.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443406127|gb|ELS64711.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21196]
Length = 366
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 178/350 (50%), Gaps = 43/350 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSI---ANIRDNEDVYIVGTTNVGKSTLINKLIEAS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDESSFMYDTPGIIQDHQMTHLVSEKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D + + S ++++H K E A+++W+N
Sbjct: 243 EIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+G L PP G + +L K +L+ DV +GLG+ ++G
Sbjct: 301 LGDLLTPP-GNPQNFDLNEIKAVRLETGKEKRDV-----MISGLGFITIG 344
>gi|295398703|ref|ZP_06808725.1| ribosome biogenesis GTPase YqeH [Aerococcus viridans ATCC 11563]
gi|294973056|gb|EFG48861.1| ribosome biogenesis GTPase YqeH [Aerococcus viridans ATCC 11563]
Length = 375
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 178/371 (47%), Gaps = 40/371 (10%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y N + + +F ++ T K + ++V V+D D G
Sbjct: 43 CQRCFKLRHY----NTLEKVSTSADEFLAILNTLSEKDA------LIVNVIDIFDVAG-- 90
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
SL L + + P +++V K+D +P V R++ W+R K G
Sbjct: 91 ------SLINGLN------RFAGTNP-ILMVANKMDAIPKAVKHNRIENWLRKYLKDNGV 137
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
K++ + L SA+K + +LLA I E+ R +V+VIG N GKS+LIN + GV+
Sbjct: 138 -KVDDLILTSAKKRANIDDLLAKIDEMRDGR-DVYVIGMANVGKSSLINRILQATGVEAD 195
Query: 428 KLTEAPIPGTTLGILRI--GGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
+T + PGTTL ++ I +A L DTPG+++P M+ L E KE++
Sbjct: 196 VITTSQFPGTTLDLIDIPFDDAEGNEASLIDTPGIINPGQMTAILEGKELVDALPNKEIK 255
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P T+++ Q + GGL RLD + E T++ S + H K+ +DE ++ H+G
Sbjct: 256 PVTFQLNPEQTLFFGGLARLDF--IAGERTSFTLYMSGQIKPHRRKLAGSDEFYQAHLGG 313
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
LQPP ++ A+ G + ++ + + DI GLGW S + + +
Sbjct: 314 ILQPPYPENVANFPGLVR-KEFSIKTPT------DIVFPGLGWVS--VSDPVQIVAYVPK 364
Query: 606 GIEITLREPLV 616
GI+I RE L+
Sbjct: 365 GIDIITREKLI 375
>gi|170016751|ref|YP_001727670.1| GTP-binding protein YqeH [Leuconostoc citreum KM20]
gi|414596537|ref|ZP_11446111.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE E16]
gi|169803608|gb|ACA82226.1| Predicted GTPase [Leuconostoc citreum KM20]
gi|390482558|emb|CCF28172.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE E16]
Length = 381
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 168/370 (45%), Gaps = 41/370 (11%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC LR+Y NE+ + D DF AT L + S ++V V+D D G
Sbjct: 53 LCQRCFRLRHY----NEIQPVELTDDDF----ATLLHQIS--ETKALIVYVIDVFDVTG- 101
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
E + + +++V KVDLLP ++ RL W++ KA G
Sbjct: 102 -------------SEISGLPRFVGQDNPILVVANKVDLLPKLLNKNRLKNWLQAELKAQG 148
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
+ ++L SA K + +LL + L R +V+V+G N GKSTLIN K
Sbjct: 149 IQPAD-IFLTSATKPQNLDDLLDKVDTLRQGR-DVYVVGVTNVGKSTLINQIIKSRTGVT 206
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+T + PGTTL RI L L DTPG++ ++ L+ K + E++P
Sbjct: 207 DLITTSRFPGTTLD--RIEIPLADGQFLIDTPGIIKRDQIAHVLDDKNLKYALPKNEIKP 264
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
RTY++ Q + +GGL R D + VT + N++LH K+ AD+ ++ HVG
Sbjct: 265 RTYQLNPEQTIFIGGLARFDFEAGQRSA--VTAYFENNLNLHRTKLLGADDFYQKHVGNL 322
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L P Q S L + + S DI AGLGW ++ E S W G
Sbjct: 323 LTPSPTQVTTSTLVKHQFHTTEKS---------DIVFAGLGWVTVPAGIEVS--GWAPQG 371
Query: 607 IEITLREPLV 616
+ + +R+ ++
Sbjct: 372 VSVLIRKAMI 381
>gi|421876418|ref|ZP_16307975.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE C10]
gi|372557711|emb|CCF24095.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE C10]
Length = 381
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 168/370 (45%), Gaps = 41/370 (11%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC LR+Y NE+ + D DF AT L + S ++V V+D D G
Sbjct: 53 LCQRCFRLRHY----NEIQPVELTDDDF----ATLLHQIS--ETKALIVYVIDVFDVTG- 101
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
E + + +++V KVDLLP ++ RL W++ KA G
Sbjct: 102 -------------SEISGLPRFVGQDNPILVVANKVDLLPKLLNKNRLKNWLQAELKAQG 148
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
+ ++L SA K + +LL + L R +V+V+G N GKSTLIN K
Sbjct: 149 IQPAD-IFLTSATKPQNLDDLLDKVDTLRQGR-DVYVVGVTNVGKSTLINQIIKSRTGVT 206
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+T + PGTTL RI L L DTPG++ ++ L+ K + E++P
Sbjct: 207 DLITTSRFPGTTLD--RIEIPLADGQFLIDTPGIIKRDQIAHVLDDKNLKYALPKNEIKP 264
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
RTY++ Q + +GGL R D + VT + N++LH K+ AD+ ++ HVG
Sbjct: 265 RTYQLNPEQTIFIGGLARFDFEAGQRSA--VTAYFENNLNLHRTKLLGADDFYQKHVGNL 322
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L P Q S L + + S DI AGLGW ++ E S W G
Sbjct: 323 LAPSPTQVTTSTLVKHQFHTTEKS---------DIVFAGLGWVTVPAGIEVS--GWAPQG 371
Query: 607 IEITLREPLV 616
+ + +R+ ++
Sbjct: 372 VSVLIRKAMI 381
>gi|418322703|ref|ZP_12934017.1| ribosome biogenesis GTPase YqeH [Staphylococcus pettenkoferi
VCU012]
gi|365231150|gb|EHM72209.1| ribosome biogenesis GTPase YqeH [Staphylococcus pettenkoferi
VCU012]
Length = 368
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 187/378 (49%), Gaps = 53/378 (14%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
VC RC L++Y NEV + + DF ++ T K G+VV VVD DF+G
Sbjct: 37 VVCKRCFRLKHY----NEVQDVGMDSEDFLNLLNTLADK------KGIVVNVVDVFDFEG 86
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
F + + K K++L KVDLLP Q++ R+ W+R A+
Sbjct: 87 SFINAVKRIVGNK---------------KIILAANKVDLLPKQINKNRVRDWLRRTARKY 131
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G V L+SA+ + G+++L+ I ++ +V+++G N GKS+LIN ++ +
Sbjct: 132 GLDA-EAVVLLSAQHNKGIQDLIDAINKVRRNE-DVYIVGTTNVGKSSLINRLIEQSVGE 189
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
+T + PGTTL ++ I L + +YDTPG++ H M+ + +E K++ + E++
Sbjct: 190 KDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHYVTPEELKIIIPKNEIK 247
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
R Y++ GQ + GGL R+D ++ + S +++H K E AD++W NH+G
Sbjct: 248 QRVYQLNEGQTLFFGGLARIDYVSGGRRSL--VCYFSNELNIHRTKTEKADDLWHNHLGE 305
Query: 546 RLQPP-------IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEAS 598
L PP + Q + L T K+++ D+ +GLG+ + ++ A
Sbjct: 306 MLTPPTSASHFDLSQVKRVRLETGKEKR-------------DVMISGLGFIT--IEAGAK 350
Query: 599 LTLWTYDGIEITLREPLV 616
+ + +++ LR+ ++
Sbjct: 351 VVVHVPKDVDVVLRKSIM 368
>gi|116618829|ref|YP_819200.1| GTP-binding protein YqeH [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|381337138|ref|YP_005174913.1| GTPase YqeH [Leuconostoc mesenteroides subsp. mesenteroides J18]
gi|116097676|gb|ABJ62827.1| Predicted GTPase [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
gi|356645104|gb|AET30947.1| GTPase YqeH [Leuconostoc mesenteroides subsp. mesenteroides J18]
Length = 379
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 172/371 (46%), Gaps = 47/371 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+ + D DF L+ + A ++V V+D D G
Sbjct: 54 CQRCFRLRHY----NEIQPVELTDDDF-----ANLLHQISDTKA-LIVYVIDVFDVTG-- 101
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
+A S + + K P LV V KVDLLP ++ RL W+R KA G
Sbjct: 102 ---SAISGLPRF--------VGKDNPILV-VANKVDLLPKLLNKNRLKNWLRTELKAQGI 149
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
++ V+L SA + + +LL I R +V+V+G N GKSTLIN K +
Sbjct: 150 QPVD-VFLTSATRPKNLDDLLDTIDNFRDGR-DVFVVGVTNVGKSTLINQIIKSRTGIQN 207
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL RI L +L DTPG++ M+ L + K + E++PR
Sbjct: 208 LITTSRFPGTTLD--RIEIPLEDGQQLIDTPGIIKRDQMAHVLTDKDLKFALPKNEIKPR 265
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ Q + +GGL R D + I T + N++LH K+ AD+ ++ H G L
Sbjct: 266 TYQLNPEQTIFIGGLARFDFISGARSAI--TAYFENNLNLHRTKLIGADDFYEQHAGGLL 323
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL--GLKGEASLTLWTYD 605
P S+L + ++ S DI +GLGW S+ G+K W
Sbjct: 324 VPA-----PSQLQNLIKHEFSITEDS------DIVFSGLGWISVPAGIKVAG----WAPK 368
Query: 606 GIEITLREPLV 616
G+ + +R+ ++
Sbjct: 369 GVSVLIRKAMI 379
>gi|238854460|ref|ZP_04644799.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 269-3]
gi|260665492|ref|ZP_05866339.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii SJ-7A-US]
gi|313471824|ref|ZP_07812316.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 1153]
gi|238832887|gb|EEQ25185.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 269-3]
gi|239530132|gb|EEQ69133.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii 1153]
gi|260560760|gb|EEX26737.1| ribosome biogenesis GTPase YqeH [Lactobacillus jensenii SJ-7A-US]
Length = 369
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 35/309 (11%)
Query: 248 CARCHSLRNYGQVKN-EVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
C RC LR+Y ++ E+ N DF RL+ G+ A ++V VVD DF+
Sbjct: 43 CKRCFRLRHYSEIMPVELNNN-----DF-----LRLLNSLGDKKA-LIVNVVDLFDFN-- 89
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA-KAG 365
SL L+ + +LVG KVDL P +++ W+R A + G
Sbjct: 90 ------NSLIPSLKRFVGNNDF-------ILVGNKVDLFPLNSKESKIKDWMRQEANRMG 136
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
PK ++L+SA K +++L+ ++ + A +V+ +G N GKSTLIN+ G
Sbjct: 137 LYPK--DIFLISAAKKRNLQDLITYLDQ-ASQDQDVYFVGTTNVGKSTLINSIIDLMGDV 193
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
+T + PGTTL ++I L + L DTPG++ ++ LN + ++ +K L+
Sbjct: 194 KDLITTSRFPGTTLDQIKIP--LDSGHYLVDTPGIMTEKQLASYLNAKDLDLIAPKKPLK 251
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P TY++ GQ + +GGL R+D S + TV+ + + +H K NAD+ ++ HVG
Sbjct: 252 PATYQLNSGQTLFLGGLGRIDF--ISGKKTSFTVYTARGLYVHRTKTTNADDFYEKHVGD 309
Query: 546 RLQPPIGQD 554
L PP G +
Sbjct: 310 LLTPPHGDE 318
>gi|253732250|ref|ZP_04866415.1| GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733152|ref|ZP_04867317.1| GTP-binding protein [Staphylococcus aureus subsp. aureus TCH130]
gi|417897885|ref|ZP_12541811.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21259]
gi|253724039|gb|EES92768.1| GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728908|gb|EES97637.1| GTP-binding protein [Staphylococcus aureus subsp. aureus TCH130]
gi|341849387|gb|EGS90530.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21259]
Length = 366
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 178/350 (50%), Gaps = 43/350 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLIEAS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDESSFMYDTPGIIQDHQMTHLVSEKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D + + S ++++H K E A+++W+N
Sbjct: 243 EIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+G L PP G + +L K +L+ DV +GLG+ ++G
Sbjct: 301 LGDLLTPP-GNPQNFDLNEVKAVRLETGKEKRDV-----MISGLGFITIG 344
>gi|258424024|ref|ZP_05686906.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9635]
gi|417889889|ref|ZP_12533968.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21200]
gi|418284085|ref|ZP_12896817.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21202]
gi|418308957|ref|ZP_12920538.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21194]
gi|418558984|ref|ZP_13123531.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21252]
gi|418889412|ref|ZP_13443545.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1524]
gi|257845645|gb|EEV69677.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9635]
gi|341855582|gb|EGS96426.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21200]
gi|365164949|gb|EHM56779.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21202]
gi|365236106|gb|EHM77008.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21194]
gi|371976334|gb|EHO93624.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21252]
gi|377752920|gb|EHT76838.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1524]
Length = 366
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 178/350 (50%), Gaps = 43/350 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLIEAS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQEHQMTHLVSEKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D + + S ++++H K E A+++W+N
Sbjct: 243 EIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+G L PP G + +L K +L+ DV +GLG+ ++G
Sbjct: 301 LGDLLTPP-GNPQNFDLNEVKAVRLETGKEKRDV-----MISGLGFITIG 344
>gi|82751199|ref|YP_416940.1| GTP-binding protein YqeH [Staphylococcus aureus RF122]
gi|82656730|emb|CAI81158.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 366
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 178/350 (50%), Gaps = 43/350 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLIEDS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D + + S ++++H K E A+++W+N
Sbjct: 243 EIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+G L PP G + +L K +L+ DV +GLG+ ++G
Sbjct: 301 LGDLLTPP-GNPQNFDLNEVKAVRLETGKEKRDV-----MISGLGFITIG 344
>gi|227889535|ref|ZP_04007340.1| GTP-binding protein [Lactobacillus johnsonii ATCC 33200]
gi|227850013|gb|EEJ60099.1| GTP-binding protein [Lactobacillus johnsonii ATCC 33200]
Length = 369
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 192/410 (46%), Gaps = 49/410 (11%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G+I ++ + KK + KKA E+ + C RC LR+Y ++ V EN
Sbjct: 8 IGCGSILQD--QDPKKSGYLPSSALKKALESDDNE---VYCQRCFRLRHYNEIM-PVEEN 61
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ DF ++ + K + +VV VVD DF + SL ++ +
Sbjct: 62 ---NDDFLALLNSISQKKA------LVVNVVDLFDF--------SNSLISSIKRFIGGNE 104
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNL 387
+LVG KVDL P +++ W+R A G K ++LVSA K + L
Sbjct: 105 Y-------ILVGNKVDLFPKNSKESKIKDWMRQEANRNGL-KPEKIFLVSAAKKKNLDEL 156
Query: 388 LAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGI 447
+AF+ + G + +++ +G N GKSTLIN +T + PGTTL ++I
Sbjct: 157 MAFLAK-KGEKKDIYFVGTTNVGKSTLINAIINMNSDLKDVITTSKFPGTTLDEIKIP-- 213
Query: 448 LPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLD- 506
L L DTPG+L+ + ++ L+ E ++VE +K L+P TY++ GQ + + GL R D
Sbjct: 214 LSNGHYLIDTPGILNANQLASHLSGKELEVVEPKKPLKPATYQLLPGQTIFLAGLGRFDY 273
Query: 507 LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRK 566
+D S T++ + ++ +H K ENAD ++ H L PP +D LG K +
Sbjct: 274 VDGPSAG---FTIYVARDLYVHRTKTENADAFYEKHKDDLLLPPSKEDN---LGPLKGQT 327
Query: 567 LKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
S DI G+G+ + + +T +GI + +R L+
Sbjct: 328 FSPKEKS------DILFGGVGFIT--TPANVVVKAYTPEGIGLGIRRALI 369
>gi|407718715|ref|YP_006796120.1| GTPase YqeH [Leuconostoc carnosum JB16]
gi|407242471|gb|AFT82121.1| GTPase YqeH [Leuconostoc carnosum JB16]
Length = 381
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 172/374 (45%), Gaps = 41/374 (10%)
Query: 243 GEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVD 302
E C RC LR+Y NE+ + D DF A L + S + ++V V+D D
Sbjct: 49 SEELFCQRCFRLRHY----NEIQPVELTDDDF----ADLLHQISDTKS--LIVYVMDVFD 98
Query: 303 FDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA 362
G E + + +++V K+DLLP ++ RL W++
Sbjct: 99 VTG--------------SEISGLPRFVGQDNPILVVANKIDLLPKLLNKRRLKNWLQAEL 144
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE 422
K+ G + ++L SA + +LL I +L R +V+V+G N GKSTLIN K
Sbjct: 145 KSQGIQPAD-IFLTSATHPKNLDDLLETIDDLRQDR-DVYVVGVTNVGKSTLINQIIKSR 202
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+T + PGTTL RI L L DTPG++ M+ L+ + K +
Sbjct: 203 TGIQDLITTSRFPGTTLD--RIVIPLSDGKDLIDTPGIIKRDQMAYVLSNKDLKYALPKN 260
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++PRTY++ Q + +GGL R D + S E +T + N+ LH K+ ADE++ H
Sbjct: 261 EIKPRTYQLNPEQTLFIGGLARFDFE--SGERTAITAYFENNLKLHRTKLAGADELYDKH 318
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
VG LQP EL + V+ S DI +GLGW + + + ++ W
Sbjct: 319 VGELLQPAPSGISTHEL---IKHEFNVTEKS------DIVFSGLGWMT--VPADIKVSGW 367
Query: 603 TYDGIEITLREPLV 616
G+ + +R+ ++
Sbjct: 368 APKGVSVLIRKAMI 381
>gi|268319902|ref|YP_003293558.1| hypothetical protein FI9785_1431 [Lactobacillus johnsonii FI9785]
gi|262398277|emb|CAX67291.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus
johnsonii FI9785]
Length = 369
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 192/410 (46%), Gaps = 49/410 (11%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G+I ++ + KK + KKA E+ + C RC LR+Y ++ V EN
Sbjct: 8 IGCGSILQD--QDPKKSGYLPSSALKKALESDDNE---VYCQRCFRLRHYNEIM-PVEEN 61
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ DF ++ + K + +VV VVD DF + SL ++ +
Sbjct: 62 ---NDDFLALLNSISQKKA------LVVNVVDLFDF--------SNSLISSIKRFIGGNE 104
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNL 387
+LVG KVDL P +++ W+R A G K ++LVSA K + L
Sbjct: 105 Y-------ILVGNKVDLFPKNSKESKIKDWMRQEANRNGL-KPEKIFLVSAAKKKNLDEL 156
Query: 388 LAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGI 447
+AF+ + G + +++ +G N GKSTLIN +T + PGTTL ++I
Sbjct: 157 MAFLAK-KGEKKDIYFVGTTNVGKSTLINAIINMNSDLKDVITTSKFPGTTLDEIKIP-- 213
Query: 448 LPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLD- 506
L L DTPG+L+ + ++ L+ E ++VE +K L+P TY++ GQ + + GL R D
Sbjct: 214 LSNGNYLIDTPGILNANQLASHLSGKELEVVEPKKPLKPATYQLLPGQTIFLAGLGRFDY 273
Query: 507 LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRK 566
+D S T++ + ++ +H K ENAD ++ H L PP +D LG K +
Sbjct: 274 VDGPSAG---FTIYVARDLYVHRTKTENADAFYEKHKDDLLLPPSKEDN---LGPLKGQT 327
Query: 567 LKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
S DI G+G+ + + +T +GI + +R L+
Sbjct: 328 FSPKEKS------DILFGGVGFIT--TPANVVVKAYTPEGIGLGIRRALI 369
>gi|386729298|ref|YP_006195681.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 71193]
gi|387602937|ref|YP_005734458.1| GTPase family protein [Staphylococcus aureus subsp. aureus ST398]
gi|404478947|ref|YP_006710377.1| GTPase [Staphylococcus aureus 08BA02176]
gi|418310191|ref|ZP_12921741.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21331]
gi|418978321|ref|ZP_13526122.1| GTP-binding protein [Staphylococcus aureus subsp. aureus DR10]
gi|283470875|emb|CAQ50086.1| GTPase family protein [Staphylococcus aureus subsp. aureus ST398]
gi|365237648|gb|EHM78494.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21331]
gi|379993937|gb|EIA15382.1| GTP-binding protein [Staphylococcus aureus subsp. aureus DR10]
gi|384230591|gb|AFH69838.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 71193]
gi|404440436|gb|AFR73629.1| putative GTPase [Staphylococcus aureus 08BA02176]
Length = 366
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 178/350 (50%), Gaps = 43/350 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLIEAS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D + + S ++++H K E A+++W+N
Sbjct: 243 EIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+G L PP G + +L K +L+ DV +GLG+ ++G
Sbjct: 301 LGDLLTPP-GNPQNFDLNEVKAVRLETGKEKRDV-----MISGLGFITIG 344
>gi|21283277|ref|NP_646365.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus MW2]
gi|49486431|ref|YP_043652.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651989|ref|YP_186493.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus COL]
gi|87160501|ref|YP_494251.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195406|ref|YP_500210.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151221711|ref|YP_001332533.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
Newman]
gi|161509825|ref|YP_001575484.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141132|ref|ZP_03565625.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|258450575|ref|ZP_05698637.1| GTP-binding protein YqeH [Staphylococcus aureus A5948]
gi|262048596|ref|ZP_06021479.1| hypothetical protein SAD30_0992 [Staphylococcus aureus D30]
gi|262051255|ref|ZP_06023479.1| hypothetical protein SA930_1686 [Staphylococcus aureus 930918-3]
gi|282916867|ref|ZP_06324625.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus D139]
gi|282920145|ref|ZP_06327870.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9765]
gi|283770672|ref|ZP_06343564.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus H19]
gi|284024655|ref|ZP_06379053.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus 132]
gi|294848627|ref|ZP_06789373.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9754]
gi|297207684|ref|ZP_06924119.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300911765|ref|ZP_07129208.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus TCH70]
gi|379014805|ref|YP_005291041.1| GTPase YqeH [Staphylococcus aureus subsp. aureus VC40]
gi|379021378|ref|YP_005298040.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus M013]
gi|384547829|ref|YP_005737082.1| GTP-binding protein [Staphylococcus aureus subsp. aureus ED133]
gi|384862197|ref|YP_005744917.1| GTPase family protein [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|384870137|ref|YP_005752851.1| GTP-binding protein [Staphylococcus aureus subsp. aureus T0131]
gi|385781882|ref|YP_005758053.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 11819-97]
gi|386831206|ref|YP_006237860.1| putative GTPase [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387780688|ref|YP_005755486.1| putative GTPase [Staphylococcus aureus subsp. aureus LGA251]
gi|415686213|ref|ZP_11450350.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS01]
gi|416842867|ref|ZP_11905194.1| GTP-binding protein YqeH [Staphylococcus aureus O11]
gi|416846547|ref|ZP_11906596.1| GTP-binding protein YqeH [Staphylococcus aureus O46]
gi|417649327|ref|ZP_12299131.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21189]
gi|417653518|ref|ZP_12303249.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21193]
gi|417799994|ref|ZP_12447126.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21310]
gi|417901075|ref|ZP_12544952.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21266]
gi|418285656|ref|ZP_12898324.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21209]
gi|418313226|ref|ZP_12924720.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21334]
gi|418316433|ref|ZP_12927871.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21340]
gi|418562587|ref|ZP_13127044.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21262]
gi|418571885|ref|ZP_13136105.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21283]
gi|418574394|ref|ZP_13138563.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21333]
gi|418579521|ref|ZP_13143616.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418599941|ref|ZP_13163415.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21343]
gi|418641781|ref|ZP_13203986.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-24]
gi|418648338|ref|ZP_13210382.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-88]
gi|418650659|ref|ZP_13212677.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-91]
gi|418655646|ref|ZP_13217495.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-105]
gi|418659237|ref|ZP_13220925.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-111]
gi|418873209|ref|ZP_13427519.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-125]
gi|418903903|ref|ZP_13457944.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418912207|ref|ZP_13466188.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG547]
gi|418925856|ref|ZP_13479758.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418928946|ref|ZP_13482832.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418934567|ref|ZP_13488389.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418948289|ref|ZP_13500606.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-157]
gi|418950693|ref|ZP_13502844.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-160]
gi|418988663|ref|ZP_13536335.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1835]
gi|419773172|ref|ZP_14299183.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CO-23]
gi|422742619|ref|ZP_16796622.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422746109|ref|ZP_16800042.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MRSA131]
gi|424785432|ref|ZP_18212235.1| GTP-binding protein YqeH [Staphylococcus aureus CN79]
gi|440707399|ref|ZP_20888098.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21282]
gi|440735047|ref|ZP_20914658.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|448741172|ref|ZP_21723142.1| GTP-binding protein YqeH [Staphylococcus aureus KT/314250]
gi|448745071|ref|ZP_21726945.1| GTP-binding protein YqeH [Staphylococcus aureus KT/Y21]
gi|21204717|dbj|BAB95413.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244874|emb|CAG43335.1| putative GTPase [Staphylococcus aureus subsp. aureus MSSA476]
gi|57286175|gb|AAW38269.1| GTP-binding protein, putative [Staphylococcus aureus subsp. aureus
COL]
gi|87126475|gb|ABD20989.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202964|gb|ABD30774.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150374511|dbj|BAF67771.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160368634|gb|ABX29605.1| GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257861733|gb|EEV84532.1| GTP-binding protein YqeH [Staphylococcus aureus A5948]
gi|259160892|gb|EEW45912.1| hypothetical protein SA930_1686 [Staphylococcus aureus 930918-3]
gi|259163243|gb|EEW47802.1| hypothetical protein SAD30_0992 [Staphylococcus aureus D30]
gi|282319354|gb|EFB49706.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus D139]
gi|282594493|gb|EFB99478.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9765]
gi|283460819|gb|EFC07909.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus H19]
gi|294824653|gb|EFG41076.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus A9754]
gi|296887701|gb|EFH26599.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|298694878|gb|ADI98100.1| GTP-binding protein [Staphylococcus aureus subsp. aureus ED133]
gi|300886011|gb|EFK81213.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus TCH70]
gi|302751426|gb|ADL65603.1| GTPase family protein [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|315198706|gb|EFU29034.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140517|gb|EFW32371.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144055|gb|EFW35824.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MRSA177]
gi|323438562|gb|EGA96309.1| GTP-binding protein YqeH [Staphylococcus aureus O11]
gi|323442801|gb|EGB00426.1| GTP-binding protein YqeH [Staphylococcus aureus O46]
gi|329314272|gb|AEB88685.1| GTP-binding protein [Staphylococcus aureus subsp. aureus T0131]
gi|329728433|gb|EGG64870.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21189]
gi|329733209|gb|EGG69546.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21193]
gi|334272526|gb|EGL90891.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21310]
gi|341846234|gb|EGS87431.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21266]
gi|344177790|emb|CCC88269.1| putative GTPase [Staphylococcus aureus subsp. aureus LGA251]
gi|359830687|gb|AEV78665.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus M013]
gi|364522871|gb|AEW65621.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 11819-97]
gi|365169466|gb|EHM60714.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21209]
gi|365236497|gb|EHM77386.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21334]
gi|365241117|gb|EHM81872.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21340]
gi|371973691|gb|EHO91039.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21262]
gi|371978377|gb|EHO95626.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21283]
gi|371979121|gb|EHO96356.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21333]
gi|374363502|gb|AEZ37607.1| GTPase YqeH [Staphylococcus aureus subsp. aureus VC40]
gi|374395530|gb|EHQ66793.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21343]
gi|375018236|gb|EHS11816.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-24]
gi|375026251|gb|EHS19634.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-88]
gi|375027945|gb|EHS21303.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-91]
gi|375036139|gb|EHS29220.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-105]
gi|375036235|gb|EHS29313.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-111]
gi|375366400|gb|EHS70397.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-125]
gi|375373050|gb|EHS76756.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-157]
gi|375376169|gb|EHS79717.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-160]
gi|377697548|gb|EHT21903.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377717756|gb|EHT41931.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377722464|gb|EHT46590.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG547]
gi|377738858|gb|EHT62867.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377742918|gb|EHT66903.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377744925|gb|EHT68902.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377770661|gb|EHT94422.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC128]
gi|383972996|gb|EID89017.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CO-23]
gi|385196598|emb|CCG16227.1| putative GTPase [Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|421956842|gb|EKU09171.1| GTP-binding protein YqeH [Staphylococcus aureus CN79]
gi|436431142|gb|ELP28496.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436506155|gb|ELP41994.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21282]
gi|445548086|gb|ELY16342.1| GTP-binding protein YqeH [Staphylococcus aureus KT/314250]
gi|445561610|gb|ELY17803.1| GTP-binding protein YqeH [Staphylococcus aureus KT/Y21]
Length = 366
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 178/350 (50%), Gaps = 43/350 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLIEAS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D + + S ++++H K E A+++W+N
Sbjct: 243 EIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+G L PP G + +L K +L+ DV +GLG+ ++G
Sbjct: 301 LGDLLTPP-GNPQNFDLNEVKAVRLETGKEKRDV-----MISGLGFITIG 344
>gi|421879139|ref|ZP_16310612.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE C11]
gi|390446938|emb|CCF26732.1| GTP-binding protein yqeH [Leuconostoc citreum LBAE C11]
Length = 381
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 168/370 (45%), Gaps = 41/370 (11%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC LR+Y NE+ + D DF AT L + S ++V V+D D G
Sbjct: 53 LCQRCFRLRHY----NEIQPVELTDDDF----ATLLHQIS--ETKALIVYVIDVFDVTG- 101
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
E + + +++V KVDLLP ++ RL W++ KA G
Sbjct: 102 -------------SEISGLPRFVGQDNPILVVANKVDLLPKLLNKNRLKNWLQADLKAQG 148
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
+ ++L SA K + +LL + L R +V+V+G N GKSTLIN K
Sbjct: 149 IQPAD-IFLTSATKPQNLDDLLDKVDTLRQGR-DVYVVGVTNVGKSTLINQIIKSRTGVT 206
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+T + PGTTL RI L L DTPG++ ++ L+ K + E++P
Sbjct: 207 DLITTSRFPGTTLD--RIEIPLADGQFLIDTPGIIKRDQIAHVLDDKNLKYALPKNEIKP 264
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
RTY++ Q + +GGL R D + VT + N++LH K+ AD+ ++ HVG
Sbjct: 265 RTYQLNPEQTIFIGGLARFDFEAGQRSA--VTAYFENNLNLHRTKLLGADDFYQKHVGNL 322
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L P Q S L + + S DI AGLGW ++ E S W G
Sbjct: 323 LTPSPTQVTTSTLVKHQFHTTEKS---------DIVFAGLGWVTVPAGIEVS--GWAPQG 371
Query: 607 IEITLREPLV 616
+ + +R+ ++
Sbjct: 372 VSVLIRKAMI 381
>gi|296111265|ref|YP_003621647.1| hypothetical protein LKI_05685 [Leuconostoc kimchii IMSNU 11154]
gi|339491463|ref|YP_004705968.1| GTPase YqeH [Leuconostoc sp. C2]
gi|295832797|gb|ADG40678.1| hypothetical protein LKI_05685 [Leuconostoc kimchii IMSNU 11154]
gi|338853135|gb|AEJ31345.1| GTPase YqeH [Leuconostoc sp. C2]
Length = 380
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 171/376 (45%), Gaps = 48/376 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E C RC LR+Y NE+ + D DF +L+ + A ++V V+D D
Sbjct: 50 EELFCKRCFRLRHY----NEIQPVELTDADF-----AKLLHQISDTRA-LIVYVIDIFDV 99
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
G E + + +++V KVDLLP ++ RL W++ K
Sbjct: 100 TG--------------SEISGLPRFVGQDNPILVVANKVDLLPKLLNKNRLKNWLQAELK 145
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ ++L SA++ + NLL I R +V+V+G N GKSTLIN K G
Sbjct: 146 MQGIKPID-IFLTSAQRPQNLDNLLDTIDYFREGR-DVYVVGVTNVGKSTLINQIIKA-G 202
Query: 424 VKVSKL-TEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
V L T + PGTTL RI L KL DTPG++ M+ L + K +
Sbjct: 203 TGVQDLITTSRFPGTTLD--RIEIPLADGKKLIDTPGIIKRDQMAHVLADKDLKFALPKN 260
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++PRTY++ Q + +GGL R D + + VT + N++LH K+ AD+ + H
Sbjct: 261 EIKPRTYQLNSEQTIFIGGLARFDFELG--QRTAVTAYFENNLNLHRTKLLGADDFYDKH 318
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL--GLKGEASLT 600
G L P S GT D + D DI AGLGW S+ G+K
Sbjct: 319 AGGLLAP-------SPHGTTTDLVKHEFSITEDS---DIVFAGLGWISIPAGVKVAG--- 365
Query: 601 LWTYDGIEITLREPLV 616
W G+ + +R+ ++
Sbjct: 366 -WAPKGVSVLIRKAMI 380
>gi|42519513|ref|NP_965443.1| GTP-binding protein YqeH [Lactobacillus johnsonii NCC 533]
gi|41583801|gb|AAS09409.1| hypothetical protein LJ_1637 [Lactobacillus johnsonii NCC 533]
Length = 369
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 192/410 (46%), Gaps = 49/410 (11%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G+I ++ + KK + KKA E+ + C RC LR+Y ++ V EN
Sbjct: 8 IGCGSILQD--QDPKKSGYLPSSALKKALESDDNE---VYCQRCFRLRHYNEIM-PVEEN 61
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ DF ++ + K + +VV VVD DF + SL ++ +
Sbjct: 62 ---NDDFLALLNSISQKKA------LVVNVVDLFDF--------SNSLISSIKRFIGGNE 104
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNL 387
+LVG KVDL P +++ W+R A G K ++LVSA K + L
Sbjct: 105 Y-------ILVGNKVDLFPKNSKESKIKDWMRQEANRNGL-KPEKIFLVSAAKKKNLDEL 156
Query: 388 LAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGI 447
+AF+ + G + +++ +G N GKSTLIN +T + PGTTL ++I
Sbjct: 157 MAFLAK-KGEKKDIYFVGTTNVGKSTLINAIINMNSDLKDVITTSKFPGTTLDEIKIP-- 213
Query: 448 LPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLD- 506
L L DTPG+L+ + ++ L+ E ++VE +K L+P TY++ GQ + + GL R D
Sbjct: 214 LSNGHYLIDTPGILNANQLASHLSGKELEVVEPKKPLKPATYQLLPGQTIFLAGLGRFDY 273
Query: 507 LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRK 566
+D S T++ + ++ +H K ENAD ++ H L PP +D LG K +
Sbjct: 274 VDGPSAG---FTIYVARDLYVHRTKTENADVFYEKHKDDLLLPPSKEDN---LGPLKGQT 327
Query: 567 LKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
S DI G+G+ + + +T +GI + +R L+
Sbjct: 328 FSPKEKS------DILFGGVGFIT--TPANVVVKAYTPEGIGLGIRRALI 369
>gi|418994322|ref|ZP_13541957.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG290]
gi|377744119|gb|EHT68097.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG290]
Length = 366
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 178/350 (50%), Gaps = 43/350 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLIEAS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQEHQMTHLVSEKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D + + S ++++H K E A+++W+N
Sbjct: 243 EIKQRVYQLNEAQILFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+G L PP G + +L K +L+ DV +GLG+ ++G
Sbjct: 301 LGDLLTPP-GNPQNFDLNEVKAVRLETGKEKRDV-----MISGLGFITIG 344
>gi|304380806|ref|ZP_07363473.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|304340682|gb|EFM06615.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
Length = 366
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 179/350 (51%), Gaps = 43/350 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLIEAS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D S + + S ++++H K E A+++W+N
Sbjct: 243 EIKQRVYQLNEAQTLFFGGLARIDY--VSDGKRPLVCFFSNDLNIHRTKTEKANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+G L PP G + +L K +L+ DV +GLG+ ++G
Sbjct: 301 LGDLLTPP-GNPQNFDLNEVKAVRLETGKEKRDV-----MISGLGFITIG 344
>gi|408411085|ref|ZP_11182268.1| Ribosome biogenesis GTPase YqeH [Lactobacillus sp. 66c]
gi|409349111|ref|ZP_11232656.1| Ribosome biogenesis GTPase YqeH [Lactobacillus equicursoris CIP
110162]
gi|407874748|emb|CCK84074.1| Ribosome biogenesis GTPase YqeH [Lactobacillus sp. 66c]
gi|407878383|emb|CCK84714.1| Ribosome biogenesis GTPase YqeH [Lactobacillus equicursoris CIP
110162]
Length = 369
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 178/376 (47%), Gaps = 48/376 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E C RC LR+Y NE+ + + DF ++ S ++ ++V VVD DF
Sbjct: 39 EEVYCQRCFRLRHY----NEIMPVALDNDDFLALLN------SLSSKKALIVNVVDLFDF 88
Query: 304 DGMFPKRAAKSLFKKLEE--AKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
+ SL L+ ++D +LVG K DL P +++ W+R
Sbjct: 89 --------SNSLIASLKRFVGQND---------FILVGNKFDLFPKNSKESKIKDWMRQE 131
Query: 362 A-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
A + G PK ++L+SA K + +L+ ++ + + +V+ +G N GKSTLIN
Sbjct: 132 ANRMGLYPK--EIFLISAAKKKNLDDLIKYLNANSQDQ-DVYFVGTTNVGKSTLINAIID 188
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
K G +T + PGTTL + I L L DTPG+L ++ RL+ E +V
Sbjct: 189 KMGDVQDLITTSRFPGTTLDKIEIP--LDNGHFLVDTPGILTKKQLASRLSVKELDLVSP 246
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+K L+P TY++ G + + GL R+D Q + TV+AS ++ +H K E ADE +
Sbjct: 247 KKPLKPATYQLLPGNTIFLAGLGRIDYLQGPSTSF--TVYASRSMYVHRTKTEKADEFYA 304
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
HVG L PP +D +L K ++ + S D+ AG+G+ + + +
Sbjct: 305 KHVGELLTPPSAED---DLPPLKGQEYHIKYRS------DVLFAGVGFIT--VPEGCVIK 353
Query: 601 LWTYDGIEITLREPLV 616
+T GI + R L+
Sbjct: 354 AYTPGGIGLGTRRALI 369
>gi|417897023|ref|ZP_12540966.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21235]
gi|341840289|gb|EGS81809.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21235]
Length = 366
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 178/350 (50%), Gaps = 43/350 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLIEAS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D + + S ++++H K E A+++W+N
Sbjct: 243 EIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKSEKANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+G L PP G + +L K +L+ DV +GLG+ ++G
Sbjct: 301 LGDLLTPP-GNPQNFDLNEVKAVRLETGKEKRDV-----MISGLGFITIG 344
>gi|333397000|ref|ZP_08478813.1| GTPase YqeH [Leuconostoc gelidum KCTC 3527]
gi|406600387|ref|YP_006745733.1| GTPase YqeH [Leuconostoc gelidum JB7]
gi|406371922|gb|AFS40847.1| GTPase YqeH [Leuconostoc gelidum JB7]
Length = 382
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 189/412 (45%), Gaps = 54/412 (13%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G + + +++ SK L + KK E +C RC LR+Y NE+
Sbjct: 22 IGCGAVMQ-VIDSSKAGYLPMSALKKSI------NSEELLCQRCFRLRHY----NEIQPV 70
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ D DF +RL+ +A A ++V V+D D G E +
Sbjct: 71 ELTDDDF-----SRLLHQISDAKA-LIVYVIDVFDVTG--------------SEIAGLPR 110
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNL 387
+ +++V KVDLLP ++ RL W++ KA G ++ ++L SA + +L
Sbjct: 111 FVGQDNPILVVANKVDLLPKLLNKNRLKNWLQAELKAQGIKPVD-IFLTSATHPQNLDDL 169
Query: 388 LAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKL-TEAPIPGTTLGILRIGG 446
L I R +V+V+G N GKSTLIN K G V L T + PGTTL RI
Sbjct: 170 LDTIDNHREGR-DVYVVGVTNVGKSTLINQIIKS-GTGVQDLITTSRFPGTTLD--RIEI 225
Query: 447 ILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLD 506
L +L DTPG++ ++ L + K + E++PRTY++ Q + +GGL R D
Sbjct: 226 PLADGKQLIDTPGIVKRDQITHVLADKDLKYALPKNEIKPRTYQLNAEQTIFIGGLARFD 285
Query: 507 LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRK 566
+ E +T + N+SLH K+ AD+ + H G L P + + + +
Sbjct: 286 FELG--ERSPITAYFENNLSLHRTKLIGADDFYDKHAGELLTP---SPQEATMTNLIRHE 340
Query: 567 LKVSGTSWDVNGIDIAAAGLGWFSL--GLKGEASLTLWTYDGIEITLREPLV 616
++ S DI AGLGW S+ G+K + W G+ + +R+ ++
Sbjct: 341 FNITEKS------DIVFAGLGWISIPAGIK----IAGWAPQGVSVLIRKAMI 382
>gi|357010653|ref|ZP_09075652.1| YqeH [Paenibacillus elgii B69]
Length = 375
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 186/370 (50%), Gaps = 36/370 (9%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC ++NY NE + + DF RL+ G ++ +VV +VD DF+G
Sbjct: 42 ICQRCFRIKNY----NEASGITLNQDDF-----LRLLTHVGGTDS-LVVNIVDIFDFEG- 90
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
S+ L A+ P ++LV K+DLLP + R+ WV+ +AK G
Sbjct: 91 -------SMISGL------ARFVGTNP-VILVVNKIDLLPKVTNYNRIVNWVQRQAKEAG 136
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
++ V L SA+K++G ++ + EL +++V+GA N GKSTLIN +
Sbjct: 137 L-RVVEVVLCSAKKNMGFERVIEAL-ELHRKGRDIYVVGATNVGKSTLINRLIRDYSDLD 194
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
++LT + PGTTL ++RI L A + DTPG+++ H ++ +++ + V + ++P
Sbjct: 195 AELTVSQYPGTTLDLVRIP--LDDGASIIDTPGIVYKHRLTELVSKKDLMKVMPDRPIKP 252
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
+++ Q + G L+R D Q ++ T + S + H K++ ADE+++ H G+
Sbjct: 253 LVFQLNDQQTIFFGSLVRFDFVQGERQSF--TFYVSNALQAHRTKLDRADELYEEHRGVL 310
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L PP ++ K +++ + +D++ +GLGW + A L + G
Sbjct: 311 LSPPSLEELEELPKLTK-HPIRIPKNA----SLDVSVSGLGWIKVNGTAGADLVIHVPKG 365
Query: 607 IEITLREPLV 616
+++ +RE ++
Sbjct: 366 VKVAVRESVI 375
>gi|385826308|ref|YP_005862650.1| hypothetical protein [Lactobacillus johnsonii DPC 6026]
gi|417837997|ref|ZP_12484235.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus johnsonii pf01]
gi|329667752|gb|AEB93700.1| hypothetical protein LJP_1378c [Lactobacillus johnsonii DPC 6026]
gi|338761540|gb|EGP12809.1| GTP-binding protein YqeH, required for biogenesis of 30S ribosome
subunit [Lactobacillus johnsonii pf01]
Length = 369
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 192/410 (46%), Gaps = 49/410 (11%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
+G G+I ++ + KK + K+A E+ + C RC LR+Y ++ V EN
Sbjct: 8 IGCGSILQD--QDPKKSGYLPSSALKRALESDDNE---VYCQRCFRLRHYNEIM-PVEEN 61
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ DF ++ + K + +VV VVD DF + SL ++ +
Sbjct: 62 ---NDDFLALLNSISQKKA------LVVNVVDLFDF--------SNSLISSIKRFIGGNE 104
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNL 387
+LVG KVDL P +++ W+R A G K ++LVSA K + L
Sbjct: 105 Y-------ILVGNKVDLFPKNSKESKIKDWMRQEANRNGL-KPEKIFLVSAAKKKNLDEL 156
Query: 388 LAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGI 447
+AF+ + G + +++ +G N GKSTLIN +T + PGTTL ++I
Sbjct: 157 MAFLAK-KGEKKDIYFVGTTNVGKSTLINAIINMNSDLKDVITTSKFPGTTLDEIKIP-- 213
Query: 448 LPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLD- 506
L L DTPG+L+ + ++ L+ E ++VE +K L+P TY++ GQ + + GL R D
Sbjct: 214 LSNGHYLIDTPGILNANQLASHLSGKELEVVEPKKPLKPATYQLLPGQTIFLAGLGRFDY 273
Query: 507 LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRK 566
+D S T++ + ++ +H K ENAD ++ H L PP +D LG K +
Sbjct: 274 VDGPSAG---FTIYVARDLYVHRTKTENADAFYEKHKDDLLLPPSKEDN---LGPLKGQT 327
Query: 567 LKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
S DI G+G+ + + +T +GI + +R L+
Sbjct: 328 FSPKEKS------DILFGGVGFIT--TPANVVVKAYTPEGIGLGIRRALI 369
>gi|395242556|ref|ZP_10419553.1| Ribosome biogenesis GTPase YqeH [Lactobacillus pasteurii CRBIP
24.76]
gi|394480288|emb|CCI85793.1| Ribosome biogenesis GTPase YqeH [Lactobacillus pasteurii CRBIP
24.76]
Length = 369
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 172/364 (47%), Gaps = 45/364 (12%)
Query: 229 AERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGN 288
A KKA E E+ +V C RC LR+Y NE+ + + DF L+ N
Sbjct: 27 ASALKKAIE--DERADV-YCQRCFRLRHY----NEIMPVELNNDDF-----LNLLNSLAN 74
Query: 289 ANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
A ++V VVD DF + S+ L+ D +LVG K DL P
Sbjct: 75 KKA-LIVNVVDLFDF--------SNSILTSLKRFVGDNDF-------ILVGNKFDLFPKN 118
Query: 349 VSPTRLDRWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQ 407
+R+ W+R A + G PK V+L+SA K + L+ ++ + + R +V+ +G
Sbjct: 119 SRQSRIKDWMRQEANRMGLYPK--EVFLISAAKQKYLDELIEYLNKASTDR-DVYFVGTT 175
Query: 408 NAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMS 467
N GKSTLIN K G +T + PGTTL RI L L DTPG++ + ++
Sbjct: 176 NVGKSTLINAIIDKMGDIKDLITTSRFPGTTLD--RIEIPLDNGHFLVDTPGIMTKNQLA 233
Query: 468 MRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSL 527
L+ + +V +K L+P TY++ G + +GGL R+D + E+ TV+ V +
Sbjct: 234 TYLDAKDLALVSPKKPLKPATYQLLPGNTLFLGGLGRIDYVKG--ESTSFTVYVPREVYV 291
Query: 528 HLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLG 587
H K+E ADE ++ H G L PP +L K ++ K + S D+ G+G
Sbjct: 292 HRTKLEKADEFYQKHFGEMLTPP---KTTKDLPEMKGKEFKTTYKS------DLLFGGIG 342
Query: 588 WFSL 591
+ ++
Sbjct: 343 FITV 346
>gi|387143202|ref|YP_005731595.1| putative GTPase [Staphylococcus aureus subsp. aureus TW20]
gi|418276913|ref|ZP_12891667.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21178]
gi|418955584|ref|ZP_13507521.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-189]
gi|269941085|emb|CBI49470.1| putative GTPase [Staphylococcus aureus subsp. aureus TW20]
gi|365173896|gb|EHM64325.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21178]
gi|375370670|gb|EHS74468.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-189]
Length = 366
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 177/350 (50%), Gaps = 43/350 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + + V L+SA K G+ +LL+ I A R N V+ +G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYTVGTTNVGKSTLINKLIEAS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D + + S ++++H K E A+++W+N
Sbjct: 243 EIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+G L PP G + +L K +L+ DV +GLG+ ++G
Sbjct: 301 LGDLLTPP-GNPQNFDLNEVKAVRLETGKEKRDV-----MISGLGFITIG 344
>gi|333371748|ref|ZP_08463690.1| GTP-binding protein [Desmospora sp. 8437]
gi|332975677|gb|EGK12563.1| GTP-binding protein [Desmospora sp. 8437]
Length = 367
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 172/374 (45%), Gaps = 40/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC +R+Y NEVA+ + D D +A ++ GN A +VV VVD D
Sbjct: 34 EHPICKRCFRIRHY----NEVAQV---EHDPDAYLA--MLGEIGNRQA-LVVQVVDLFDL 83
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
G + + + P L+L G K+DL P RL WV H
Sbjct: 84 SGSW--------------IPGIQRHTGGNPILIL-GNKLDLFPKSAKVQRLKEWVYHTVS 128
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V L SA K + + I+ R +V+V G N GKSTLIN K+ G
Sbjct: 129 ELGVKPVD-VVLTSAAKGVHFDEVARAIETCREGR-DVFVTGTANVGKSTLINRLLKEFG 186
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+T +P PGTTL + I L +L D PG++ MS + DE + + E
Sbjct: 187 SGEEVITTSPYPGTTLDTIHIP--LEGGRELVDMPGIVRRDRMSEWVAPDELGEITPKSE 244
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P+ Y++ GQ + GGL R+D + V +V A+ ++ +H K+ +ADE+W+ H
Sbjct: 245 IKPKVYQLNDGQTLFFGGLARMDYSEG-VRQPFVCHMAN-SLYIHRTKLAHADEVWEKHR 302
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP S L + G D+ +GLGW + G K A + LW
Sbjct: 303 GELLSPP---KDPSSLPPLVRHTFHLDGKQKQ----DLVISGLGWIATG-KERARVELWV 354
Query: 604 YDGIEITLREPLVL 617
G+ + +R P +L
Sbjct: 355 PRGVRVEVR-PAIL 367
>gi|418906541|ref|ZP_13460567.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|377763446|gb|EHT87302.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC345D]
Length = 366
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 178/350 (50%), Gaps = 43/350 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFAKKE 422
G + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLIEAS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++ +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSGKELKIIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D + + S ++++H K E A+++W+N
Sbjct: 243 EIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VCFFSNDLNIHRTKTEKANDLWRNQ 300
Query: 543 VGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+G L PP G + +L K +L+ DV +GLG+ ++G
Sbjct: 301 LGDLLTPP-GNPQNFDLNEVKAVRLETGKEKRDV-----MISGLGFITIG 344
>gi|300361205|ref|ZP_07057382.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri JV-V03]
gi|300353824|gb|EFJ69695.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri JV-V03]
Length = 369
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 176/370 (47%), Gaps = 44/370 (11%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y ++ V EN + DF ++ + K + +VV VVD DF
Sbjct: 43 CQRCFRLRHYNEIM-PVEEN---NDDFLALLNSISQKKA------LVVNVVDLFDF---- 88
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
+ SL ++ + +LVG KVDL P +++ W+R A G
Sbjct: 89 ----SNSLISSIKRFIGGNEY-------ILVGNKVDLFPKNSKESKIKDWMRQEANRNGL 137
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
K ++LVSA K + +L+AF+ + G + +++ +G N GKSTLIN
Sbjct: 138 -KPEKIFLVSAAKKKNLADLMAFLAK-KGEKKDIYFVGTTNVGKSTLINAIINMNSDLKD 195
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL ++I L L DTPG+L+ + ++ L+ E ++VE +K L+P
Sbjct: 196 VITTSKFPGTTLDEIKIP--LSNGHYLIDTPGILNANQLASHLSGKELEVVEPKKPLKPA 253
Query: 488 TYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
TY++ GQ + + GL R D +D S T++ + ++ +H K ENAD ++ H
Sbjct: 254 TYQLLPGQTIFLAGLGRFDYVDGPSAG---FTIYVARDLYVHRTKTENADTFYEKHKDDL 310
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L PP +D LG K + S DI G+G+ + + +T +G
Sbjct: 311 LLPPSKEDN---LGPLKGQTFSPKEKS------DILFGGVGFIT--TPANVVVKAYTPEG 359
Query: 607 IEITLREPLV 616
I + +R L+
Sbjct: 360 IGLGIRRALI 369
>gi|227431108|ref|ZP_03913166.1| GTP-binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
gi|227353148|gb|EEJ43316.1| GTP-binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
Length = 379
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 171/371 (46%), Gaps = 47/371 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y NE+ + D DF L+ + A ++V V+D D G
Sbjct: 54 CQRCFRLRHY----NEIQPVELTDDDF-----ANLLHQISDTKA-LIVYVIDVFDVTG-- 101
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
+A S + + K P LV V K DLLP ++ RL W+R KA G
Sbjct: 102 ---SAISGLPRF--------VGKDNPILV-VANKADLLPKLLNKNRLKNWLRTELKAQGI 149
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
++ V+L SA + + +LL I R +V+V+G N GKSTLIN K +
Sbjct: 150 QPVD-VFLTSATRPKNLDDLLDTIDNFRDGR-DVFVVGVTNVGKSTLINQIIKSRTGIQN 207
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL RI L +L DTPG++ M+ L + K + E++PR
Sbjct: 208 LITTSRFPGTTLD--RIEIPLEDGQQLIDTPGIIKRDQMAHVLTDKDLKFALPKNEIKPR 265
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ Q + +GGL R D + I T + N++LH K+ AD+ ++ H G L
Sbjct: 266 TYQLNPEQTIFIGGLARFDFISGARSAI--TAYFENNLNLHRTKLIGADDFYEQHAGGLL 323
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL--GLKGEASLTLWTYD 605
P S+L + ++ S DI +GLGW S+ G+K W
Sbjct: 324 VPA-----PSQLQNLIKHEFSITEDS------DIVFSGLGWISVPAGIKVAG----WAPT 368
Query: 606 GIEITLREPLV 616
G+ + +R+ ++
Sbjct: 369 GVSVLIRKAMI 379
>gi|49483844|ref|YP_041068.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282904178|ref|ZP_06312066.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C160]
gi|282906005|ref|ZP_06313860.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282908916|ref|ZP_06316734.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|283958360|ref|ZP_06375811.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295428174|ref|ZP_06820806.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590860|ref|ZP_06949498.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MN8]
gi|415682399|ref|ZP_11447715.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS00]
gi|418564794|ref|ZP_13129215.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21264]
gi|418582523|ref|ZP_13146601.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418597137|ref|ZP_13160670.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21342]
gi|418601018|ref|ZP_13164466.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21345]
gi|418892326|ref|ZP_13446439.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418898231|ref|ZP_13452301.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418901101|ref|ZP_13455157.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1214]
gi|418909448|ref|ZP_13463444.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG149]
gi|418917494|ref|ZP_13471453.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418923278|ref|ZP_13477194.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418982602|ref|ZP_13530310.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418986268|ref|ZP_13533953.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1500]
gi|49241973|emb|CAG40668.1| putative GTPase [Staphylococcus aureus subsp. aureus MRSA252]
gi|282327180|gb|EFB57475.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282331297|gb|EFB60811.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595796|gb|EFC00760.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus C160]
gi|283790509|gb|EFC29326.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295128532|gb|EFG58166.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575746|gb|EFH94462.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus MN8]
gi|315195499|gb|EFU25886.1| GTP-binding protein YqeH [Staphylococcus aureus subsp. aureus
CGS00]
gi|371975931|gb|EHO93223.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21264]
gi|374395373|gb|EHQ66640.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21342]
gi|374400265|gb|EHQ71384.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21345]
gi|377702498|gb|EHT26820.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377704312|gb|EHT28622.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377704883|gb|EHT29192.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377710933|gb|EHT35171.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377730620|gb|EHT54687.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377735237|gb|EHT59273.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377750668|gb|EHT74606.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377752095|gb|EHT76019.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIG149]
gi|377761266|gb|EHT85142.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus CIGC341D]
Length = 366
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 182/360 (50%), Gaps = 57/360 (15%)
Query: 243 GEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCV 301
G+ +C RC L+NY NEV + + DF +++ SG A+ G+VV VVD
Sbjct: 32 GDDVICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVF 80
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DF+G F + + K K++L K+DLLP Q++ R+ W++
Sbjct: 81 DFEGSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRT 125
Query: 362 AKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTFA 419
A+ + + + V L+SA K G+ +LL+ I A R N V+++G N GKSTLIN
Sbjct: 126 ARKY-SLEADDVVLISAEKGWGIDDLLSSI---ANIRENEDVYIVGTTNVGKSTLINKLI 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
+ + +T + PGTTL ++ I L + +YDTPG++ H M+ ++ E K++
Sbjct: 182 EASVGEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPGIIQDHQMTHLVSEKELKIIM 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+KE++ R Y++ Q + GGL R+D + + S ++++H K E A+++W
Sbjct: 240 PKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--ICFFSNDLNIHRTKTEKANDLW 297
Query: 540 KNHVGIRLQPP-------IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
+N +G L PP + + +A L T K+++ D+ +GLG+ ++G
Sbjct: 298 RNQLGDLLTPPGNLQNFDLNEVKAVRLETGKEKR-------------DVMISGLGFITIG 344
>gi|403379144|ref|ZP_10921201.1| hypothetical protein PJC66_04878 [Paenibacillus sp. JC66]
Length = 369
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 177/371 (47%), Gaps = 36/371 (9%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
+C RC +++Y ++ +E DF R++ S +V+ ++D DF+G
Sbjct: 35 VICQRCFRIKHYNEMTSETPNQ----DDFLRMLGHIAHTRS------LVIHIIDVFDFEG 84
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
SL L+ + P L++V K+DLLP + ++ WV+ +AK
Sbjct: 85 --------SLISGLQ------RFIGSNPVLLVVN-KMDLLPKVTNWNKVVNWVQKQAKDN 129
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G K+ V L SA+K +G LL + L R +V+V+GA NAGKSTLIN K
Sbjct: 130 GL-KVADVALCSAKKGIGFDTLLKKLDSLRQGR-DVYVVGATNAGKSTLINRLIKDYSDL 187
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
S+LT + PGTTL ++RI L + DTPG+++ H +S + + + K ++
Sbjct: 188 ESELTTSHYPGTTLNMVRIP--LDDGKAIIDTPGIVYKHRLSEVVPKPLLSTLLPDKPIK 245
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P Y++ Q + G L+R D + ++ T + S + +H K+E ADE++ H G
Sbjct: 246 PVVYQLNEKQTLFFGSLVRFDFARGERQSF--TCYTSNRIPVHRTKLERADELYAQHKGE 303
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
L PP D+ + W +V + +I +GLGW A + + +
Sbjct: 304 MLAPPT-LDQLEHIPHWT----RVPVSIRKGQEAEILISGLGWIKANGTQGAEVVIHAPE 358
Query: 606 GIEITLREPLV 616
G +I +R+ L+
Sbjct: 359 GTKIAVRKSLI 369
>gi|379795955|ref|YP_005325953.1| putative GTPase [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356872945|emb|CCE59284.1| putative GTPase [Staphylococcus aureus subsp. aureus MSHR1132]
Length = 366
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 179/355 (50%), Gaps = 53/355 (14%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA-GVVVMVVDCVDFD 304
+C RC L+NY NEV + + DF +++ SG A+ G+VV VVD DF+
Sbjct: 35 VICRRCFRLKNY----NEVQDVGLESEDFLKLL-------SGLADKKGIVVNVVDVFDFE 83
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 84 GSFINAVKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKRTARK 128
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGV 424
G + + V L+SA K G+ +LL+ I ++ +V+++G N GKSTLIN +
Sbjct: 129 YGL-EADDVVLISAEKGWGIDDLLSSIAKVR-ENEDVYIVGTTNVGKSTLINKLIEASVG 186
Query: 425 KVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKEL 484
+ +T + PGTTL ++ I L + ++DTPG++ H M+ ++ E K++ +KE+
Sbjct: 187 EKDVVTTSRFPGTTLDMIDIP--LDETSFMFDTPGIIQDHQMTHLVSEKELKIIMPKKEI 244
Query: 485 QPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+ R Y++ Q + GGL R+D + + S +++H K E A+E+W+N +G
Sbjct: 245 KQRVYQLNEEQTLFFGGLARIDYVSGGKRPL--ICFFSNELNIHRTKTEKANELWRNQLG 302
Query: 545 IRLQPP-------IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG 592
L PP + + +A L T K+++ D+ +GLG+ ++G
Sbjct: 303 ELLTPPSNPQNFDLNEVKAVRLETGKEKR-------------DVMISGLGFITIG 344
>gi|56963402|ref|YP_175133.1| GTP-binding protein YqeH [Bacillus clausii KSM-K16]
gi|56909645|dbj|BAD64172.1| GTPase [Bacillus clausii KSM-K16]
Length = 372
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 167/355 (47%), Gaps = 38/355 (10%)
Query: 242 KGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCV 301
K +V VC RC+ L++Y NE+ I D DF + A S + ++V VVD V
Sbjct: 34 KRDVVVCKRCYRLKHY----NEIEPVSIGDEDFQAMFA------SLHHKKALIVKVVDVV 83
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DF G + A + + K ++LV KVDLLP + +L W++
Sbjct: 84 DFYGSWISGAQRFVGKN---------------PVLLVANKVDLLPKSTNRNKLTNWLKKS 128
Query: 362 AKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK 421
A G L V L+S G+ ++ I ++ R +V+V+G N GKS+ IN
Sbjct: 129 ASDLGLKPLE-VKLMSTVTGEGIDDVALTIDDMRRGR-DVYVVGCTNVGKSSFINRILAM 186
Query: 422 EG-VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
G + +T + PGTTL ++ I L L DTPGL++ H + L+ K +
Sbjct: 187 HGQTGEAMITTSHFPGTTLAMIDIP--LGDGKSLVDTPGLVNRHQYAHLLSVKGLKEITP 244
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+KE++P Y++K GQ + +GGL R D + + V+ + + +H K+E AD+++
Sbjct: 245 KKEIKPIVYQLKEGQTLFLGGLARFDFVKGPPSSF--IVYVANRLHIHRTKMEKADDLYS 302
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKG 595
H G L PP +D ++ KV +DI +GLGW + +G
Sbjct: 303 KHGGELLVPPYKED-GEQVRPLVKHSFKVGKEP-----MDIVFSGLGWIRIQTEG 351
>gi|429328803|gb|AFZ80563.1| hypothetical protein BEWA_034200 [Babesia equi]
Length = 569
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 163/337 (48%), Gaps = 26/337 (7%)
Query: 290 NAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQV 349
N VV+ ++D + + S+ +L A + L ++ V KVD++P
Sbjct: 242 NDSVVIFLIDLTNLEA--------SVIPELYIALRNRTLD-----VIWVANKVDVIPKPN 288
Query: 350 SPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIK---ELAGPRGNVWVIGA 406
PT + RW+R + G K V LVS+ K +G+ L +K + PR N++V+GA
Sbjct: 289 DPTEIKRWLRSFVRQIGNAKSADVILVSSTKGIGLDVLEHRMKAYLQTGNPR-NIYVVGA 347
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKST +N F V T + IPGTTL + G LP KL DTPG+ P +
Sbjct: 348 TNVGKSTFVNRFLDFIQYNVGGTTRSAIPGTTLEFIEFG--LPKGFKLVDTPGIPIPSQV 405
Query: 467 SMRLNRDEQKM-VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNV 525
L R + + I K + P + +++ G+++ VGGL R+DL Q S + V + S +
Sbjct: 406 PSLLYRPIDLLSISIMKTINPLSIKLEAGRSLLVGGLARVDLVQGS--STIVQCFFSSGI 463
Query: 526 SLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGID-IAAA 584
++ + + A++I K+ VG L PP ++ +L + V+ T +D +
Sbjct: 464 TIKVCRSVAAEDILKHQVGTSLYPPHDKEDFEKLLPLSKYRFAVNCTGR--RPVDEFVIS 521
Query: 585 GLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAP 621
GLGW S G + ++ GI + LR P +L AP
Sbjct: 522 GLGWISFCGIGPKIIEMYIPRGINL-LRRPAMLTTAP 557
>gi|330794402|ref|XP_003285268.1| hypothetical protein DICPUDRAFT_149114 [Dictyostelium purpureum]
gi|325084810|gb|EGC38230.1| hypothetical protein DICPUDRAFT_149114 [Dictyostelium purpureum]
Length = 750
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 162/341 (47%), Gaps = 69/341 (20%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RCH L+NYG+V A IP F + ++ +K V+V VVD +DF G
Sbjct: 227 ICQRCHLLKNYGRV----APVSIPIEKFRKNLSK--IKELN----CVIVKVVDLMDFHGS 276
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
F +E+ +D + P +++VG K+DLLPS + R++ W+ AKA G
Sbjct: 277 F-----------IEDFRD---IVGNNP-VIIVGNKMDLLPSDIHKDRIENWITSEAKARG 321
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPR--GNVWVIGAQNAGKSTLINTFAKKEGV 424
L+ V L+S+ G++ FI EL R +V+V+G N GKST +N+ +
Sbjct: 322 LAHLSHVLLLSSTNKDGIK---QFIIELEKIRRGRDVFVLGCSNVGKSTFVNSLVDEYNS 378
Query: 425 KV----------------------------------SKLTEAPIPGTTLGILRIGGILPA 450
KV SK+T + +PGTTL +L + L
Sbjct: 379 KVEFVKSDDQKEDKKKKLSIQEQKELEREKLLRSIQSKITTSILPGTTLNLLSLP--LWK 436
Query: 451 KAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQA 510
+ L+DTPG+ +P M L+ E + V K ++P + G+ + +GGL+R+D
Sbjct: 437 DSTLFDTPGIDNPKQMLKLLSLKELRQVLPTKRIKPTLVHLIDGKTLFIGGLVRIDY-TG 495
Query: 511 SVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPI 551
+ T V+ S ++ LHL + AD+++K G L PPI
Sbjct: 496 PLSTFL--VYTSNSIPLHLTSTKKADKLFKKQQGRLLTPPI 534
>gi|224543253|ref|ZP_03683792.1| hypothetical protein CATMIT_02453 [Catenibacterium mitsuokai DSM
15897]
gi|224523786|gb|EEF92891.1| ribosome biogenesis GTPase YqeH [Catenibacterium mitsuokai DSM
15897]
Length = 362
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 179/373 (47%), Gaps = 42/373 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC+ L +Y Q ++ +L D DF RV+ T G + +VV +VD DF
Sbjct: 32 EKILCQRCYKLMHYHQ---KMESHLTKD-DFLRVLQT-----VGEKDC-LVVYIVDLFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + +D ++++ K D+LP + RL+ WVR + K
Sbjct: 82 NGSLVPGLMRHI------GYND---------VLVLANKRDILPKSLKEHRLNTWVRRQFK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G L+ V + S +K++ + I E R +V+V+G N GKST IN K
Sbjct: 127 EYGIKPLD-VVVTSGKKNMNFDEIFDKIDEYRHGR-DVYVVGITNVGKSTFINRMLKNYS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL +++I L + LYDTPG+L+ H + ++ + + + E
Sbjct: 185 DTTNLITTSEFPGTTLDLIKIP--LDDHSSLYDTPGILNEHQYTSIVDEKDLAYIMPQGE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++P ++++ Q++ G R+D + + + S N+ +H K E ADE++ H
Sbjct: 243 VRPMSFQLNSDQSIFFSGFARIDYTKGNKGNF--ICYFSRNMQIHRTKTEKADELFNRHK 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
+++ P AS + +++K + DI +GLG+ + + + ++
Sbjct: 301 QLQVYGP-----ASSM-----KEMKAYEFTLPEEKRDIVISGLGFVCIH-APKGKIKVYV 349
Query: 604 YDGIEITLREPLV 616
DGI++ +RE L+
Sbjct: 350 PDGIDVFMRESLI 362
>gi|328868001|gb|EGG16382.1| hypothetical protein DFA_09413 [Dictyostelium fasciculatum]
Length = 704
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 146/594 (24%), Positives = 249/594 (41%), Gaps = 118/594 (19%)
Query: 109 CPGCGIFMQDKDPNLPGYYKQKKDI------ERNEEFLEDEEGIENDIEGFEEDI----- 157
C GCG MQ +D N GY + I + E+F+++EE + ++ EE+
Sbjct: 133 CTGCGCTMQYEDTNTLGYIPKSVAIRYMLNKQVREDFIKEEEEMILKLKEQEENQLEQQQ 192
Query: 158 -VDGNFDQSDGKESDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEE 216
D +Q + E + D + ++ + E + + + DDLD G + G I E
Sbjct: 193 DYDPYLNQFNELEEEVVDNNNNNNNILEHQEEEEMMGELDDLDQYGNKKTKIDKGQIYFE 252
Query: 217 LVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDR 276
K S ++ + VC RCH L+NYG+V IP +F
Sbjct: 253 RFFGRSKLNSSSSDTTTATTATLDTFLKKEVCQRCHMLKNYGKV----VPIKIPVNEFKS 308
Query: 277 VIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV 336
+A N N VV+ VVD +DF G F +D + P ++
Sbjct: 309 KLAN-----IRNMNC-VVIKVVDIMDFSGTF--------------IEDFRHIVGNNP-VI 347
Query: 337 LVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAG 396
+V K+D+LP+ + R++ W+R KA G + L SA K+ G+ + + ++++
Sbjct: 348 VVCNKMDVLPADIHKHRIEDWIRRECKARGMVAAHVKLLSSASKE-GITDFIVELEKIRR 406
Query: 397 PRGNVWVIGAQNAGKSTLINTFAKKEGVKV------------------------------ 426
R +V+V+G N GKST +N + KV
Sbjct: 407 GR-DVFVVGCSNVGKSTFLNALVDEYSNKVEFGDQQEEENGGKKKKNGKQEVKHKEAEPQ 465
Query: 427 ---------------SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
S++T + PGTTL ++ + L + L+DTPG+ +P + L
Sbjct: 466 ETPEKEAERKRKLLASRVTTSIFPGTTLNVISVP--LWNNSTLFDTPGVDNPSQIIKLLK 523
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
+E K V K ++P + G+++ + GL R+D + T TV+ + N+ LHL +
Sbjct: 524 PEELKAVIPTKRIKPSLVHMIEGKSLFLAGLARIDYS-GGLATF--TVYTNNNLPLHLCR 580
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASEL---------------GTWKDRKLKVSGTS--- 573
+ AD +++ G L PPIG + + G D K+ +S +
Sbjct: 581 TDKADALFQRQRGKMLCPPIGLENININNNNNNNYIESDIIGNGLVFDEKMDLSQLTKFS 640
Query: 574 -------WDVNGIDIAAAGLGWFSLG-LKGEA---SLTLWTYDGIEITLREPLV 616
+ D+ +GLGW ++ L +A L+++T I+++LR PLV
Sbjct: 641 ITPEQVDFKHTHTDLVISGLGWIAIKPLSKQAKPFKLSIYTPKFIDVSLRAPLV 694
>gi|238853781|ref|ZP_04644147.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri 202-4]
gi|420147894|ref|ZP_14655168.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gasseri CECT 5714]
gi|238833590|gb|EEQ25861.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri 202-4]
gi|398400562|gb|EJN54109.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gasseri CECT 5714]
Length = 369
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 172/369 (46%), Gaps = 42/369 (11%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y ++ V EN + DF ++ + K + +VV VVD DF
Sbjct: 43 CQRCFRLRHYNEIM-PVEEN---NDDFLALLNSISQKKA------LVVNVVDLFDF---- 88
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
+ SL ++ + +LVG KVDL P +++ W+R A G
Sbjct: 89 ----SNSLISSIKRFIGGNEY-------ILVGNKVDLFPKNSKESKIKDWMRQEANRNGL 137
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
K ++LVSA K + +L+AF+ + G + +++ +G N GKSTLIN
Sbjct: 138 -KPEKIFLVSAAKKKNLADLMAFLAK-KGEKKDIYFVGTTNVGKSTLINAIINMNSDLKD 195
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL ++I L L DTPG+L+ + ++ L+ E ++VE +K L+P
Sbjct: 196 VITTSKFPGTTLDEIKIP--LSNGHYLIDTPGILNANQLASHLSGKELEVVEPKKPLKPA 253
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ GQ + + GL R D T++ + ++ +H K ENAD ++ H L
Sbjct: 254 TYQLLPGQTIFLAGLGRFDYVDGPSSGF--TIYVARDLYVHRTKTENADTFYEKHKDDLL 311
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
PP D LG K + S DI G+G+ + + +T +GI
Sbjct: 312 LPPSKDDC---LGPLKGQTFSPKEKS------DILFGGVGFIT--TPANVVVKAYTPEGI 360
Query: 608 EITLREPLV 616
+ +R L+
Sbjct: 361 GLGIRRALI 369
>gi|336053764|ref|YP_004562051.1| GTP-binding protein [Lactobacillus kefiranofaciens ZW3]
gi|333957141|gb|AEG39949.1| GTP-binding protein [Lactobacillus kefiranofaciens ZW3]
Length = 369
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 179/387 (46%), Gaps = 46/387 (11%)
Query: 232 KKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA 291
K +A+ + C RC LR+Y NE+ + + DF ++ + K +
Sbjct: 27 KSALDKARTNENTDVYCQRCFRLRHY----NEIMPVDLNNDDFLALLNSLAEKKA----- 77
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+VV VVD DF + SL L+ + +LVG K DL P
Sbjct: 78 -LVVNVVDLFDF--------SNSLLSSLKRFVGNNDF-------ILVGNKFDLFPKNSKQ 121
Query: 352 TRLDRWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
+++ W+R A + G PK ++LVSARK L + L+ +I + + + +V+ +G N G
Sbjct: 122 SKIKDWIRQEANRMGLYPK--KIFLVSARKKLNLDTLIEYINQQSQDK-DVYFVGTTNVG 178
Query: 411 KSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRL 470
KSTLIN G +T + PGTTL RI L L DTPG++ ++ L
Sbjct: 179 KSTLINAIVDMMGDIQDLITTSRFPGTTLD--RIEIPLENGHFLIDTPGIMTESQLTTHL 236
Query: 471 NRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLG 530
N + +++ +K L+P TY++ G + + GL R+D + E+ TV+ + + +H
Sbjct: 237 NAKDLELISPKKPLKPATYQLLPGNTLFLAGLGRIDYLKG--ESTSFTVYVARGMYVHRT 294
Query: 531 KIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWF 589
K NAD ++ H G L PP D+ L G ++ N D+ G+G+
Sbjct: 295 KTINADAFYEKHRGELLAPPASDDQLPAL----------KGQEFNTNYKSDLLFGGIGFV 344
Query: 590 SLGLKGEASLTLWTYDGIEITLREPLV 616
++ KG T +T GI + +R L+
Sbjct: 345 TVP-KGCVVKT-YTPAGIGLGIRRALI 369
>gi|228910174|ref|ZP_04073993.1| hypothetical protein bthur0013_43220 [Bacillus thuringiensis IBL
200]
gi|228849457|gb|EEM94292.1| hypothetical protein bthur0013_43220 [Bacillus thuringiensis IBL
200]
Length = 318
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 149/298 (50%), Gaps = 32/298 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ G ++A +VV +VD DF
Sbjct: 33 EQVICQRCFRLKHY----NEIQDVSLTDDDF-----LRILNGIGKSDA-LVVKIVDIFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + + + K++LVG K DL+P V ++ W+R+ AK
Sbjct: 83 NGSWLPGLHRFVGNN---------------KVLLVGNKADLIPKSVKHDKVKHWMRYSAK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G K V+L+SA K G+ L I+ G + +V+V+G N GKST IN K+
Sbjct: 128 QLGL-KPEDVFLISAAKGQGIAELADAIEYYRGGK-DVYVVGCTNVGKSTFINRMIKEFS 185
Query: 424 VKVSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L ++ LYDTPG+++ H M+ + + K++ K
Sbjct: 186 DETENVITTSHFPGTTLDLIDIP--LDEESSLYDTPGIINHHQMAHYVGKQSLKLITPTK 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
E++P +++ Q + GL R D T S +++H K+E ADE++K
Sbjct: 244 EIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAF--TCHFSNRLTIHRTKLEKADELYK 299
>gi|421193547|ref|ZP_15650793.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB553]
gi|399971706|gb|EJO05945.1| GTP-binding protein YqeH [Oenococcus oeni AWRIB553]
Length = 385
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 170/367 (46%), Gaps = 42/367 (11%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC L+NY Q+ E + D D + I T + + +V+ +VD D G
Sbjct: 58 LCERCFKLKNYNQI-----EPVAFDSDHFQKILTSI-----SDKKALVLYLVDLFDVGG- 106
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
S+ L + + VLVG K D+LP V ++ + AK G
Sbjct: 107 -------SMINGLTRFIGNNPV-------VLVGNKFDILPKSVKKNKIANRLTKEAKNEG 152
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
L V L + + D G + LL I + ++V+G N GKSTLIN K+ +
Sbjct: 153 IKVLKTVVLSADKGDSG-QYLLEEISDYIDEYEEIFVVGVTNVGKSTLINQIIKQISGRG 211
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
S +T + PGTTL + I L K ++ DTPG++H M+ ++ + K + KE++
Sbjct: 212 SVITTSRFPGTTLDKIEIP--LTEKTRVIDTPGIIHDSQMAHFIDSKDFKYLLPNKEVKA 269
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
T ++ GQA+ + GL +D S I VT + N+ LH GKIENA++++ + G
Sbjct: 270 GTLQLSKGQAIFLAGLGWIDFLNKS--KISVTAYFENNIELHRGKIENAEKLFSSQAGRL 327
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L+P + E + +++K+ D A AGLGWF+ A + G
Sbjct: 328 LKPTV----LKEYRELEKKEIKLKANQ------DFAIAGLGWFT--FHDSAPICFHLPKG 375
Query: 607 IEITLRE 613
+ ++R+
Sbjct: 376 LAFSVRQ 382
>gi|451343499|ref|ZP_21912571.1| ribosome biogenesis GTPase YqeH [Eggerthia catenaformis OT 569 =
DSM 20559]
gi|449337862|gb|EMD17018.1| ribosome biogenesis GTPase YqeH [Eggerthia catenaformis OT 569 =
DSM 20559]
Length = 359
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 178/376 (47%), Gaps = 51/376 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L +Y AE++ DF +++ G +A +VV +VD D
Sbjct: 32 ERVLCQRCFKLMHYHTKIETSAESI----DF-----VKILSQIGQKDA-LVVYIVDLFDL 81
Query: 304 DG-MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA 362
G M P F + +++ K D+LP + +L+R+VR +
Sbjct: 82 YGSMIPGFMRHVGFNDV----------------LVLANKRDVLPKSLKDDKLERYVRRQL 125
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE 422
K L+ V + SA+K+ + I EL R +V+V G N GKS+ IN K
Sbjct: 126 KKESIKPLD-VIITSAKKNYNYDLIYESINELRKGR-DVYVTGTTNVGKSSFINGLLKHY 183
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
G +T + PGTTLG+++I L + +YDTPG+++ H M+ R+ + + +
Sbjct: 184 GGIKGFITVSEFPGTTLGMIKIP--LDENSAIYDTPGIINNHQMTSRVTHKDLVKIIPQS 241
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDL--DQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
E++P T+++ G Q ++ G L RLD D+ S T + S N+ +H K+ENAD ++
Sbjct: 242 EIRPVTFQLSGNQTLYFGALARLDYLGDKGS-----FTCYFSKNLPIHRTKLENADNLYN 296
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
H+ +++ I + E ++ ++ +I +GLG+ S+ G +
Sbjct: 297 RHMELKIGIDISKIEDFETISYMVKE-----------PCEIVISGLGFISVNALGIIKIH 345
Query: 601 LWTYDGIEITLREPLV 616
+ GI++ +RE ++
Sbjct: 346 VPV--GIDVIMRERMI 359
>gi|418621384|ref|ZP_13184160.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU123]
gi|419769637|ref|ZP_14295731.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-250]
gi|374829328|gb|EHR93132.1| ribosome biogenesis GTPase YqeH [Staphylococcus epidermidis VCU123]
gi|383358256|gb|EID35717.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus IS-250]
Length = 288
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 141/259 (54%), Gaps = 14/259 (5%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKE 393
K++LV K+DLLP Q++ R+ W+R A+ G + V L+SA K G+ LL I
Sbjct: 20 KIILVANKIDLLPKQINHRRVKEWLRKSARKYGL-EAEDVVLISANKGWGIDELLQSINH 78
Query: 394 LAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAK 453
+ + +V+++G N GKSTLIN ++ + +T + PGTTL ++ I L K+
Sbjct: 79 VRN-KDDVYIVGTTNVGKSTLINKLIEQSVGEKDVVTTSRFPGTTLDMIDIP--LDEKSF 135
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
++DTPG++ H M+ ++ +E K++ + E++ R Y++ Q + GGL R+D
Sbjct: 136 MFDTPGIIQSHQMTNYVSENELKIIIPKNEIKQRVYQLNEKQTLFFGGLARIDYVSGGKR 195
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQD-RASELGTWKDRKLKVSGT 572
+ + S ++++H K E A+++WK+ +G L PP QD + L K +L+ T
Sbjct: 196 PL--VCFFSNDLNIHRTKTEKANDLWKSQLGALLSPP--QDAQQFNLNDVKAVRLETGKT 251
Query: 573 SWDVNGIDIAAAGLGWFSL 591
DI +GLG+ ++
Sbjct: 252 KR-----DIMISGLGFITI 265
>gi|315645928|ref|ZP_07899049.1| ribosome biogenesis GTPase YqeH [Paenibacillus vortex V453]
gi|315278689|gb|EFU42003.1| ribosome biogenesis GTPase YqeH [Paenibacillus vortex V453]
Length = 374
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 179/374 (47%), Gaps = 38/374 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC ++NY NE + + +F RL+ G NA +V+ +VD DF
Sbjct: 38 EPVICQRCFRIKNY----NEASSVTVDQDEF-----LRLLGQIGGKNA-LVIHIVDLFDF 87
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G SL L+ + + VL K DLLP + ++ WV+ + K
Sbjct: 88 EG--------SLISGLQRFVGNNPV-------VLAVNKTDLLPKVTNWNKVLNWVQKQCK 132
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + + L SA+K+ G LL + + G R +V+V+GA N GKS+LIN +
Sbjct: 133 EHGL-RTEDIVLCSAKKNQGFERLLEMVGQHRGDR-DVYVVGATNVGKSSLINRLIRDYS 190
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+LT + PGTTL ++ I L + DTPG+++P S ++R++ V
Sbjct: 191 DLDQELTVSRYPGTTLDMVNIP--LDDGRYIIDTPGIVYPWRYSEVVSREDLGTVMPENP 248
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+P Y++ GQ + GG R D Q ++ T + S + +H K+E AD +++ H
Sbjct: 249 LKPMVYQLNEGQTLFFGGFGRFDFLQGEHQSF--TCFISGRLGIHRTKLERADSLFEEHA 306
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKV-SGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLW 602
G L PP ++R EL W ++++ GT DV +GLGW + + A + +
Sbjct: 307 GELLSPPT-KERLEELPEWTRHEIRIPKGTRQDV-----FISGLGWIKINGEQGALVAVH 360
Query: 603 TYDGIEITLREPLV 616
GI++ R L+
Sbjct: 361 APKGIKVLSRPSLI 374
>gi|314933767|ref|ZP_07841132.1| ribosome biogenesis GTPase YqeH [Staphylococcus caprae C87]
gi|313653917|gb|EFS17674.1| ribosome biogenesis GTPase YqeH [Staphylococcus caprae C87]
Length = 366
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 175/356 (49%), Gaps = 53/356 (14%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNAN-AGVVVMVVDCVD 302
E +C RC L+NY NEV + + DF ++ +G +N +G+VV VVD D
Sbjct: 33 EDVICQRCFRLKNY----NEVQDVGMDSEDFLNLL-------TGLSNKSGIVVNVVDVFD 81
Query: 303 FDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA 362
F+G F + + K K++L K+DLLP Q++ R+ W++ A
Sbjct: 82 FEGSFINAIKRIVGNK---------------KIILAANKLDLLPKQINQRRVKEWLKKTA 126
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE 422
+ G + + V L+SA K G+ L+ I ++ +V+V+G N GKSTLIN +
Sbjct: 127 RKYGL-EADDVVLISADKGWGIEELMQSINQVRNNE-DVYVVGTTNVGKSTLINKLIEIS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L +YDTPG++ H M+ ++ E K + +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDETTFMYDTPGIIQEHQMTNYVSDIELKTIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D ++ + S ++++H K E A+E+WKN
Sbjct: 243 EIKQRVYQLNEEQTLFFGGLARIDYVSGGKRSL--VCFFSNDLNIHRTKTEKANELWKNQ 300
Query: 543 VGIRLQPP-------IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+G L PP + +A L T K ++ D+ +GLG+ ++
Sbjct: 301 LGSLLTPPHDASQFDLNDVKAVRLETGKAKR-------------DVMISGLGFITI 343
>gi|441471183|emb|CCQ20938.1| Uncharacterized protein yqeH [Listeria monocytogenes]
gi|441474312|emb|CCQ24066.1| Uncharacterized protein yqeH [Listeria monocytogenes N53-1]
Length = 306
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 146/296 (49%), Gaps = 39/296 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
RAK G + V LVSA K G LL I EL + +V+V+G N GKSTLIN
Sbjct: 124 TRAKEQGLAATD-VVLVSAEKGHGFDTLLEKIDELRNGQ-DVYVVGCTNVGKSTLINRII 181
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
K+ + + +T + PGTTL + I L L DTPG+++ H M+ ++ K +
Sbjct: 182 KQASGENNVITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAIT 239
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENA 535
+KE++P +++ Q + +G L RLD +++ V+ S N+ +H K+E A
Sbjct: 240 PKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKA 293
>gi|223044373|ref|ZP_03614407.1| ribosome biogenesis GTPase YqeH [Staphylococcus capitis SK14]
gi|417907787|ref|ZP_12551554.1| ribosome biogenesis GTPase YqeH [Staphylococcus capitis VCU116]
gi|222442242|gb|EEE48353.1| ribosome biogenesis GTPase YqeH [Staphylococcus capitis SK14]
gi|341594874|gb|EGS37552.1| ribosome biogenesis GTPase YqeH [Staphylococcus capitis VCU116]
Length = 366
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 174/356 (48%), Gaps = 53/356 (14%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNAN-AGVVVMVVDCVD 302
E +C RC L+NY NEV + + DF ++ +G +N +G+VV VVD D
Sbjct: 33 EDVICQRCFRLKNY----NEVQDVGMDSEDFLNLL-------TGLSNKSGIVVNVVDVFD 81
Query: 303 FDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA 362
F+G F + + K K++L K+DLLP Q++ R+ W++ A
Sbjct: 82 FEGSFINAIKRIVGNK---------------KIILAANKLDLLPKQINQRRVKEWLKKTA 126
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE 422
+ G + + V L+SA K G+ L+ I ++ +V+V+G N GKST IN +
Sbjct: 127 RKYGL-EADDVVLISADKGWGIEELMQSINQVRNNE-DVYVVGTTNVGKSTFINKLIEIS 184
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
+ +T + PGTTL ++ I L +YDTPG++ H M+ ++ E K + +K
Sbjct: 185 VGEKDVVTTSRFPGTTLDMIDIP--LDETTFMYDTPGIIQEHQMTNYVSDKELKTIMPKK 242
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
E++ R Y++ Q + GGL R+D ++ + S ++++H K E A+E+WKN
Sbjct: 243 EIKQRVYQLNEEQTLFFGGLARIDYVSGGKRSL--VCFFSNDLNIHRTKTEKANELWKNQ 300
Query: 543 VGIRLQPP-------IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+G L PP + +A L T K ++ D+ +GLG+ ++
Sbjct: 301 LGSLLTPPHDASQFDLNDVKAVRLETGKAKR-------------DVMISGLGFITI 343
>gi|167756987|ref|ZP_02429114.1| hypothetical protein CLORAM_02536 [Clostridium ramosum DSM 1402]
gi|237732927|ref|ZP_04563408.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|365833456|ref|ZP_09374972.1| ribosome biogenesis GTPase YqeH [Coprobacillus sp. 3_3_56FAA]
gi|374625564|ref|ZP_09697980.1| ribosome biogenesis GTPase YqeH [Coprobacillus sp. 8_2_54BFAA]
gi|167703162|gb|EDS17741.1| ribosome biogenesis GTPase YqeH [Clostridium ramosum DSM 1402]
gi|229383996|gb|EEO34087.1| conserved hypothetical protein [Coprobacillus sp. D7]
gi|365257900|gb|EHM87923.1| ribosome biogenesis GTPase YqeH [Coprobacillus sp. 3_3_56FAA]
gi|373915224|gb|EHQ46995.1| ribosome biogenesis GTPase YqeH [Coprobacillus sp. 8_2_54BFAA]
Length = 365
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 190/375 (50%), Gaps = 44/375 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
+V +C RC L+NY +++ +L D DF ++++ GN + +VV +VD D+
Sbjct: 33 DVILCKRCFRLKNYHELQ---KTDLTSD-DF-----LKILQEIGNHDC-LVVYLVDLFDY 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G SL L ++ + +++G K D+LP + +++ W+R + K
Sbjct: 83 NG--------SLINGLSRHLNNNDI-------LVLGNKRDILPKSLKDRKIEHWLRRQLK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK-E 422
G ++ V L S K+ + L+ I E R +V+++G N GKS+LIN+ K
Sbjct: 128 ESGIKPID-VILSSGTKNYNLDLLIDKINEYRHGR-DVYIVGVTNVGKSSLINSLLKHYA 185
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
GV + +T + PGTTL ++ I L K LYD+PG+++ H M+ + ++ +++ +
Sbjct: 186 GVTDNLITTSEFPGTTLDLIEIP--LDDKNYLYDSPGIINNHQMAHLVKDEDLRIIIPKS 243
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNH 542
EL+P +++ Q ++ GGL R+D + + T + + +H K+ N+D ++ H
Sbjct: 244 ELRPINFQLNDQQTLYFGGLARVDFIKGPRSSF--TCFFPKLLKIHRTKLGNSDNLYNRH 301
Query: 543 VGIRLQPPIGQDR-ASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTL 601
+ L P I + +E+ ++ D KL IDI +GLG+ S+ A++ +
Sbjct: 302 --LTLMPEIESIKDINEMASY-DFKLPEG-------KIDIVISGLGFVSVNCPN-ANVRV 350
Query: 602 WTYDGIEITLREPLV 616
G+ + +RE L+
Sbjct: 351 HAPQGVGVFIREALI 365
>gi|418183293|ref|ZP_12819850.1| GTPase family protein [Streptococcus pneumoniae GA43380]
gi|353847722|gb|EHE27742.1| GTPase family protein [Streptococcus pneumoniae GA43380]
Length = 293
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 143/288 (49%), Gaps = 27/288 (9%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKEL 394
++LVG K D+LP V ++ +W+ RA G ++ V L SA+ ++ ++ I+
Sbjct: 27 VLLVGNKKDILPKSVKSGKISQWLMKRAHEEGLRPVD-VVLTSAQNKHAIKEVIDKIEHY 85
Query: 395 AGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKL 454
R +V+V+G N GKSTLIN ++ + +T + PGTTL + I L + +
Sbjct: 86 RKGR-DVYVVGVTNVGKSTLINAIIQEITGDQNVITTSRFPGTTLDKIEIP--LDDGSYI 142
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
YDTPG++H H M+ L K V +KE++P+TY++ Q + +GGL R D +
Sbjct: 143 YDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNPEQTLFLGGLGRFDFITGEKQG 202
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDR------ASELGTWKDRKLK 568
T + + LH K+E A + H+G L PP +++ + T KD+
Sbjct: 203 F--TAFFDNELKLHRSKLEGASAFYDKHLGTLLTPPNSKEKEDFPRLVQHVFTIKDKT-- 258
Query: 569 VSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
D+ +GLGW + + G A + +W +G+ + R+ ++
Sbjct: 259 -----------DLVISGLGW--IRVTGTAKVAVWAPEGVAVVTRKAII 293
>gi|418026729|ref|ZP_12665523.1| GTP-binding protein [Streptococcus thermophilus CNCM I-1630]
gi|354694903|gb|EHE94534.1| GTP-binding protein [Streptococcus thermophilus CNCM I-1630]
Length = 272
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 141/281 (50%), Gaps = 15/281 (5%)
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
VG K D+LP V ++ +W+ RA G ++ V L SA+ ++ L+ I+ L
Sbjct: 5 VGNKKDILPKSVKDGKVTQWLTERAHEEGMRPVD-VMLTSAQNHHAIKELIQRIEALRKG 63
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
R +V+V+G N GKSTLIN K+ +T + PGTTL + I L + ++DT
Sbjct: 64 R-DVYVVGVTNVGKSTLINAIIKEITGDKDVITTSRFPGTTLDKIEIP--LDDGSYIFDT 120
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYV 517
PG++H H M+ L+ + K V +KE++P+TY++ GQ + +GGL R D +
Sbjct: 121 PGIIHRHQMAHYLSAKDLKYVSPKKEIKPKTYQLNAGQTLFLGGLGRFDFIDGDKQGF-- 178
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN 577
T + N+ LH K++ AD + HVG L PP G ++ + + +
Sbjct: 179 TAFFDNNLKLHRTKLDGADAFYDKHVGSLLMPP-GPKELADFPKLVRHEFTIKDKT---- 233
Query: 578 GIDIAAAGLGWFSLGLKGEASLTLWTY--DGIEITLREPLV 616
D+ +GLGW + K + + +G+ + +R+ ++
Sbjct: 234 --DVVFSGLGWIRVQGKADQPTIVAACAPEGVGVVVRKAII 272
>gi|242373901|ref|ZP_04819475.1| GTP-binding protein [Staphylococcus epidermidis M23864:W1]
gi|242348455|gb|EES40057.1| GTP-binding protein [Staphylococcus epidermidis M23864:W1]
Length = 366
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 168/348 (48%), Gaps = 37/348 (10%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NEV + + DF ++ + G+VV VVD DF
Sbjct: 33 EDVICQRCFRLKNY----NEVQDVGMDSEDFLNLLT------GLSDQKGIVVNVVDVFDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F + + K K++L K+DLLP Q++ R+ W++ A+
Sbjct: 83 EGSFINAIKRIVGNK---------------KIILAANKLDLLPKQINKRRVKEWLKKSAR 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G + V L+SA K G+ LL I + +V+++G N GKSTLIN +
Sbjct: 128 KYGL-EAEDVVLISADKGWGIEELLQSINQYRNNE-DVYIVGTTNVGKSTLINKLIEISV 185
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL ++ I L +YDTPG++ H M+ ++ E K + +KE
Sbjct: 186 GEKDVVTTSRFPGTTLDMIDIP--LDETTFMYDTPGIIQEHQMTHYVSEKELKTIMPKKE 243
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
++ R Y++ GQ + GGL R+D + + S ++++H K E A+E+WK+ +
Sbjct: 244 IKQRVYQLNEGQTLFFGGLARIDYVSGGKRPL--ICFFSNDLNIHRTKTEKANELWKSQL 301
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
G L PP + +L K +L+ DV +GLG+ ++
Sbjct: 302 GSVLTPPHNAENF-DLNNVKAVRLETGKAKRDV-----MISGLGFITI 343
>gi|374339364|ref|YP_005096100.1| ribosome biogenesis GTPase YqeH [Marinitoga piezophila KA3]
gi|372100898|gb|AEX84802.1| ribosome biogenesis GTPase YqeH [Marinitoga piezophila KA3]
Length = 373
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 179/377 (47%), Gaps = 49/377 (12%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++YG+ L+P D + L K N + V+ V+D +DF
Sbjct: 34 EEALCQRCFKLKHYGE--------LMP-MKIDINFLSELKKIIKNFDT--VLWVIDIIDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G + K+ LE KD + L+ KVDLLP V+ L WV R K
Sbjct: 83 EGTYDKQI-------LELVKDK--------NVFLIINKVDLLPKSVAFAELKDWVLERVK 127
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN-VWVIGAQNAGKSTLINTFAKKE 422
K + + L+SA+K+ G+ L+ K L G N V+G N GKS+L+NT
Sbjct: 128 NDLNIKKDNIRLISAKKNFGINRLM---KILKGQNINKAIVVGTTNVGKSSLLNTITN-- 182
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
K+T + PGTTLG++R I +LYDTPG+ + + + Q + ++
Sbjct: 183 ----VKITTSSFPGTTLGVVR-RKIPDYGIELYDTPGIETNNRFTDFFDIYTQVEMIPKR 237
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLDLDQAS---VETIYVTVWASPNVSLHLGKIENADEIW 539
+ +T++ G+ + + L R + + ++ I++ ++A N+S H K E +++
Sbjct: 238 TISRKTFKPDVGKVIFISSLFRFKILSPAHDDLKPIFL-IFAPENISFHQTKEERVEDLL 296
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
+N +G L PP ++ ++ K+ + ++A GLGW S+ +G ++
Sbjct: 297 QNRIGEVLYPPYEKNYPLDIEYEKEIVMIEENE-------ELALPGLGWISVR-RGPLNI 348
Query: 600 TLWTYDGIEITLREPLV 616
+ IE+ +R+PL+
Sbjct: 349 EVVKPKNIEMVIRKPLI 365
>gi|116630032|ref|YP_815204.1| GTP-binding protein YqeH [Lactobacillus gasseri ATCC 33323]
gi|311110338|ref|ZP_07711735.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri MV-22]
gi|116095614|gb|ABJ60766.1| Predicted GTPase [Lactobacillus gasseri ATCC 33323]
gi|311065492|gb|EFQ45832.1| ribosome biogenesis GTPase YqeH [Lactobacillus gasseri MV-22]
Length = 369
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 170/369 (46%), Gaps = 42/369 (11%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC LR+Y ++ V EN + DF ++ + K +VV VVD DF
Sbjct: 43 CQRCFRLRHYNEIM-PVEEN---NDDFLALLNSISQK------KALVVNVVDLFDF---- 88
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
+ SL ++ + +LV KVDL P +++ W+R A G
Sbjct: 89 ----SNSLISSIKRFIGGNEY-------ILVVNKVDLFPKNSKESKIKDWMRQEANRNGL 137
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
K ++LVSA K + +L+AF+ + G + +++ +G N GKSTLIN
Sbjct: 138 -KPEKIFLVSAAKKKNLADLMAFLAK-KGEKKDIYFVGTTNVGKSTLINAIINMNSDLKD 195
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
+T + PGTTL ++I L L DTPG+L+ + ++ L+ E ++VE +K L+P
Sbjct: 196 VITTSKFPGTTLDEIKIP--LSNGHYLIDTPGILNANQLASHLSGKELEVVEPKKPLKPA 253
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
TY++ GQ + + GL R D T++ + ++ +H K ENAD ++ H L
Sbjct: 254 TYQLLPGQTIFLAGLGRFDYVDGPSSGF--TIYVARDLYVHRTKTENADTFYEKHKDDLL 311
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
PP D LG K + S DI G+G+ + + +T +GI
Sbjct: 312 LPPSKDDC---LGPLKGQTFSPKEKS------DILFGGVGFIT--TPANVVVKAYTPEGI 360
Query: 608 EITLREPLV 616
+ +R L+
Sbjct: 361 GLGIRRALI 369
>gi|223986364|ref|ZP_03636371.1| hypothetical protein HOLDEFILI_03682 [Holdemania filiformis DSM
12042]
gi|223961655|gb|EEF66160.1| hypothetical protein HOLDEFILI_03682 [Holdemania filiformis DSM
12042]
Length = 353
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 167/363 (46%), Gaps = 53/363 (14%)
Query: 242 KGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCV 301
K +C RC L +Y ++ + E + PD R++A +A +++ VVD
Sbjct: 26 KAGSVLCQRCFRLTHYDDLQFSMREGIDPD----RILAQI------HAMDALILWVVDLF 75
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DF+ + + LF K +++VGTK DLLP V +L ++V R
Sbjct: 76 DFEASLLEGMNRHLFGK---------------DVIVVGTKRDLLPETVGSEKLAKFVYGR 120
Query: 362 AKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK 421
K G + G+ + G +L I+ G +V V+G NAGKSTL+N K
Sbjct: 121 LKELGI-HVKGLVVTGKNIPGGPEEVLRAIEWAKGK--DVVVMGMANAGKSTLLNALMDK 177
Query: 422 EGVKVSKLTEAPIPGTTLGI--LRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
+LT + PGTTL L I G+ +YDTPGL + M + L+ ++ K V
Sbjct: 178 -----PQLTSSRYPGTTLDFNPLDIHGV-----TVYDTPGLTPRNSMLLHLDEEDLKTVL 227
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
K ++P ++++G Q+ VGGL R+DL E + + S + LH G+ + ADE+W
Sbjct: 228 PAKAVKPVGFQLRGDQSFAVGGLCRIDL--LGCEHVSAVFYCSNLLELHRGRADKADELW 285
Query: 540 KNHVGIRLQP-PIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL-GLKGEA 597
H G L+P P G A W L G DV G+GW SL G G+
Sbjct: 286 DRHYGELLRPIPAGMPYAE----WTSTVLTPLGVKEDV-----VIPGVGWMSLSGTCGQI 336
Query: 598 SLT 600
+T
Sbjct: 337 RVT 339
>gi|395238195|ref|ZP_10416133.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gigeriorum CRBIP
24.85]
gi|394477899|emb|CCI86110.1| Ribosome biogenesis GTPase YqeH [Lactobacillus gigeriorum CRBIP
24.85]
Length = 369
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 158/327 (48%), Gaps = 36/327 (11%)
Query: 234 KAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGV 293
KA EA+ ++ C RC LR+Y NE+ + + DF ++ + K + +
Sbjct: 32 KAIEAEDQE---VYCQRCFRLRHY----NEIMPVDLNNDDFLALLNSLAEKKA------L 78
Query: 294 VVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTR 353
+V VVD DF + SL L+ + K +LVG K DL P ++
Sbjct: 79 IVNVVDLFDF--------SNSLLSSLKRFVGNNKF-------ILVGNKFDLFPKNSRQSK 123
Query: 354 LDRWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
+ W+R A + G P+ ++L+SA + + L+ ++ + + +++ +G N GKS
Sbjct: 124 IKDWMRQEANRMGLYPE--KIFLISAARQKFLDELIEYLNANSQDQ-DIYFVGMTNVGKS 180
Query: 413 TLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
TLIN K G +T + PGTTL RI L L DTPG++ + + L+
Sbjct: 181 TLINAIIDKMGDIKDLITTSRFPGTTLD--RIEIPLDNGHYLVDTPGIMTENQLVAHLDP 238
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ +V +K L+P TY++ G + +GGL R+D + E+ TV+A V +H K+
Sbjct: 239 KDLALVSPKKPLKPATYQLLPGNTLFLGGLGRIDYLKG--ESTSFTVYAPREVYVHRTKV 296
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASEL 559
NADE ++ H G L PP+ EL
Sbjct: 297 SNADEFYRKHNGEMLTPPVASKDLPEL 323
>gi|339623958|ref|ZP_08659747.1| GTPase YqeH [Fructobacillus fructosus KCTC 3544]
Length = 388
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 174/387 (44%), Gaps = 63/387 (16%)
Query: 242 KGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCV 301
+ E +C RC LR+Y NE+ + D DF +L+ + A ++V V+D
Sbjct: 53 ESEQLLCQRCFRLRHY----NEIQPVSLTDDDF-----IKLLHQVSESKA-LIVYVLDLF 102
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV-------LVGTKVDLLPSQVSPTRL 354
DF G LP+ V L+G KVDLLP + ++
Sbjct: 103 DFSG---------------------STIPGLPRFVGQDNPIYLIGNKVDLLPKSLKANKI 141
Query: 355 DRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
WVR + K G K V L SA + +L I EL R +V+V+G N GKSTL
Sbjct: 142 KDWVRGQLKDQGI-KPVAVDLTSAAHPANLDAILDKIDELRAGR-DVYVVGTTNVGKSTL 199
Query: 415 INTFAK-KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
IN K K GV+ +T + PGTTL + I L L DTPG++ + ++
Sbjct: 200 INQIIKSKTGVQ-ELITTSRFPGTTLDQIAIP--LDDGRSLIDTPGIIKADQYAHQVTDK 256
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET-IYVTVWASPNVSLHLGKI 532
+ K V + E++ RTY++ GQ V +GGL R DL + VT + N++LH K+
Sbjct: 257 DLKYVLPKNEIKARTYQLNDGQTVFIGGLARFDLITGLEDAKTGVTFYFENNLNLHRTKL 316
Query: 533 ENADEIWKNHVGIRLQP-PIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
ADE ++ H G L P P D +K + D+ AGLG+ +L
Sbjct: 317 VGADEFYEKHQGGLLTPVPKSADSGLISHEFKTK-----------TAADLVIAGLGFITL 365
Query: 592 GLKGEASLTLWTY--DGIEITLREPLV 616
A +T+ Y G+ + LR+ ++
Sbjct: 366 ----PAGVTVKGYAPTGVSVFLRKAMI 388
>gi|313124180|ref|YP_004034439.1| ribosome biogenesis GTPase yqeh [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280743|gb|ADQ61462.1| Ribosome biogenesis GTPase YqeH [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 369
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 180/383 (46%), Gaps = 45/383 (11%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A+ E+ EV C RC LR+Y NE+ + + DF ++ T K ++
Sbjct: 31 AKVENGERDEV-YCQRCFRLRHY----NEIMPVSLDNDDFLALLNTMAEK------KALI 79
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
V VVD DF + S K+ D +LVG K+DL P +++
Sbjct: 80 VNVVDLFDF-----SNSLISSLKRFVGTND----------FILVGNKLDLFPKNSKESKI 124
Query: 355 DRWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
W+R A + G PK ++L+SA K + L+ ++ + + + +V+ +G N GKST
Sbjct: 125 KDWMRQEANRMGLYPK--DIFLISAAKKKNLDTLIDYLNKHSQDQ-DVYFVGTTNVGKST 181
Query: 414 LINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
LIN + G +T + PGTTL + I L L DTPG+L ++ RL+
Sbjct: 182 LINAIIDEMGDVQDLITTSRFPGTTLDQIEIP--LDNGHFLVDTPGILTDKQLASRLDPK 239
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIE 533
+ + +K L+P TY++ G + + GL R+D + + T++A+ + +H K E
Sbjct: 240 DLDLASPKKPLKPATYQLLPGNTIFLAGLGRIDYLKGPSTSF--TIYAARGMYIHRTKTE 297
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGL 593
ADE ++ HVG L PP G + S+L K ++ + S D+ AG+G+ + +
Sbjct: 298 KADEFYQKHVGELLSPP-GPN--SDLPPLKGQEYSIKYRS------DVLFAGVGFIT--V 346
Query: 594 KGEASLTLWTYDGIEITLREPLV 616
+ +T GI + R L+
Sbjct: 347 PEGCVIKAYTPGGIGLGTRRALI 369
>gi|422844094|ref|ZP_16890804.1| GTP-binding protein [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|325685794|gb|EGD27867.1| GTP-binding protein [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 378
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 180/383 (46%), Gaps = 45/383 (11%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
A+ E+ EV C RC LR+Y NE+ + + DF ++ T K ++
Sbjct: 40 AKVENGERDEV-YCQRCFRLRHY----NEIMPVSLDNDDFLALLNTMAEK------KALI 88
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
V VVD DF + S K+ D +LVG K+DL P +++
Sbjct: 89 VNVVDLFDF-----SNSLISSLKRFVGTND----------FILVGNKLDLFPKNSKESKI 133
Query: 355 DRWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
W+R A + G PK ++L+SA K + L+ ++ + + + +V+ +G N GKST
Sbjct: 134 KDWMRQEANRMGLYPK--DIFLISAAKKKKLDTLIDYLNKHSQDQ-DVYFVGTTNVGKST 190
Query: 414 LINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
LIN + G +T + PGTTL + I L L DTPG+L ++ RL+
Sbjct: 191 LINAIIDEMGDVQDLITTSRFPGTTLDQIEIP--LDNGHFLVDTPGILTDKQLASRLDPK 248
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIE 533
+ + +K L+P TY++ G + + GL R+D + + T++A+ + +H K E
Sbjct: 249 DLDLASPKKPLKPATYQLLPGNTIFLAGLGRIDYLKGPSTSF--TIYAARGMYIHRTKTE 306
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGL 593
ADE ++ HVG L PP G + S+L K ++ + S D+ AG+G+ + +
Sbjct: 307 KADEFYQKHVGELLSPP-GPN--SDLPPLKGQEYSIKYRS------DVLFAGVGFIT--V 355
Query: 594 KGEASLTLWTYDGIEITLREPLV 616
+ +T GI + R L+
Sbjct: 356 PEGCVIKAYTPGGIGLGTRRALI 378
>gi|261405558|ref|YP_003241799.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. Y412MC10]
gi|261282021|gb|ACX63992.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. Y412MC10]
Length = 375
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 175/371 (47%), Gaps = 36/371 (9%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
+C RC ++NY NE + + +F RL+ G NA +V+ +VD DF+G
Sbjct: 41 VICQRCFRIKNY----NEASSVAVDQDEF-----LRLLGQIGGKNA-LVIHIVDLFDFEG 90
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
SL L+ + + +L K DLLP + ++ WV+ + K
Sbjct: 91 --------SLISGLQRFVGNNPV-------ILAVNKTDLLPKVTNWNKVLNWVQKQCKEH 135
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G + + L SA+K+ G LL + G R +V+V+GA N GKS+LIN +
Sbjct: 136 GL-RTEDIVLCSAKKNQGFERLLETVAHYRGDR-DVYVVGATNVGKSSLINRLIRDYSDL 193
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
+LT + PGTTL ++ I L + DTPG+++P S ++R++ V L+
Sbjct: 194 DQELTVSRYPGTTLDMVNIP--LDDGRYIIDTPGIVYPWRYSELVSREDLGTVMPENPLK 251
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P Y++ GQ + GG R D Q ++ T + S + +H K+E AD ++ H G
Sbjct: 252 PMVYQLNEGQTLFFGGFGRFDFLQGEHQSF--TCFISGRLGIHRTKLERADSLFAEHAGE 309
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
L PP ++R EL W ++++ + D+ +GLGW + + A + +
Sbjct: 310 LLSPPT-KERLEELPEWTRHEIRIPKGARQ----DVFISGLGWIKINGEQGALVAVHVPK 364
Query: 606 GIEITLREPLV 616
GI++ R L+
Sbjct: 365 GIKVLSRPSLI 375
>gi|338730984|ref|YP_004660376.1| ribosome biogenesis GTPase YqeH [Thermotoga thermarum DSM 5069]
gi|335365335|gb|AEH51280.1| ribosome biogenesis GTPase YqeH [Thermotoga thermarum DSM 5069]
Length = 372
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 168/359 (46%), Gaps = 49/359 (13%)
Query: 235 AREAQKEKGEVTVCARCHSLRNYGQVKN-EVAENLIPDFDFDRVIATRLMKPSGNANAGV 293
A + +K +G+ +C RC L++Y +VK + +N++ + +++K S +
Sbjct: 25 AFKKRKAEGKEILCQRCFWLKHYRKVKPVRIDQNVLESLE-------KVVKESE-----L 72
Query: 294 VVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTR 353
VV ++D DF+G + +R K L +K K+ LV K+DL+P V
Sbjct: 73 VVWIIDISDFEGSYDERIKKLLARK---------------KVALVVNKIDLIPKAVKIDE 117
Query: 354 LDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
+ W++ K ++L+SA K+ G+ +L F+++ V +G N GKS+
Sbjct: 118 IRSWLKTCVNVDDFEK---IFLLSAEKNYGINSLYRFLEKF----NKVCFVGVTNVGKSS 170
Query: 414 LINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
+ N + K K T +PGTTL I+ + ++ K++DTPGL+ + L +
Sbjct: 171 IFNKLSGK------KATVTSLPGTTLDIIS-AKLKDSQTKIFDTPGLITSQRLMDFLPVE 223
Query: 474 EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIE 533
Q + K+L T++ + VGG+ + D +AS V HL I
Sbjct: 224 CQAEIWAVKKLSRMTFKPDKDNVLFVGGMCVFEFDFEGPFRPIFQFFASEKVKFHLTNIT 283
Query: 534 NADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSL 591
D+IW+ H G L PP + S+ K+K +D++ G +++ AGLGW S+
Sbjct: 284 KKDQIWEKHYGKMLVPPCKSSQPSK------EKVKWVERFFDLDIGQELSIAGLGWLSV 336
>gi|385816103|ref|YP_005852494.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|418028692|ref|ZP_12667246.1| hypothetical protein LDBUL1632_00040 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|325126140|gb|ADY85470.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|354691530|gb|EHE91451.1| hypothetical protein LDBUL1632_00040 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 378
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 179/382 (46%), Gaps = 46/382 (12%)
Query: 238 AQKEKGEV--TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVV 295
A+ E GE C RC LR+Y NE+ + + DF ++ T K ++V
Sbjct: 40 AKVENGEREEVYCQRCFRLRHY----NEIMPVSLDNDDFLALLNTMAEK------KALIV 89
Query: 296 MVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLD 355
VVD DF + S K+ D +LVG K+DL P +++
Sbjct: 90 NVVDLFDF-----SNSLISSLKRFVGTND----------FILVGNKLDLFPKNSKESKIK 134
Query: 356 RWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
W+R A + G PK ++L+SA K + L+ ++ + + + +V+ +G N GKSTL
Sbjct: 135 DWMRQEANRMGLYPK--DIFLISAAKKKKLDTLIDYLNKHSQDQ-DVYFVGTTNVGKSTL 191
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN + G +T + PGTTL + I L L DTPG+L ++ RL+ +
Sbjct: 192 INAIIDEMGDVQDLITTSRFPGTTLDQIEIP--LDNGHFLVDTPGILTDKQLASRLDPKD 249
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
+ +K L+P TY++ G + + GL R+D + + T++A+ + +H K E
Sbjct: 250 LDLASPKKPLKPATYQLLPGNTIFLAGLGRIDYLKGPSTSF--TIYAARGMYIHRTKTEK 307
Query: 535 ADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
ADE ++ HVG L PP G + S+L K ++ + S D+ AG+G+ + +
Sbjct: 308 ADEFYQKHVGELLSPP-GPN--SDLPPLKGQEYSIKYRS------DVLFAGVGFIT--VP 356
Query: 595 GEASLTLWTYDGIEITLREPLV 616
+ +T GI + R L+
Sbjct: 357 EGCVIKAYTPGGIGLGTRRALI 378
>gi|300813180|ref|ZP_07093554.1| ribosome biogenesis GTPase YqeH [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300495838|gb|EFK30986.1| ribosome biogenesis GTPase YqeH [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 369
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 179/382 (46%), Gaps = 46/382 (12%)
Query: 238 AQKEKGEV--TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVV 295
A+ E GE C RC LR+Y NE+ + + DF ++ T K ++V
Sbjct: 31 AKVENGEREEVYCQRCFRLRHY----NEIMPVSLDNDDFLALLNTMAEK------KALIV 80
Query: 296 MVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLD 355
VVD DF + S K+ D +LVG K+DL P +++
Sbjct: 81 NVVDLFDF-----SNSLISSLKRFVGTND----------FILVGNKLDLFPKNSKESKIK 125
Query: 356 RWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
W+R A + G PK ++L+SA K + L+ ++ + + + +V+ +G N GKSTL
Sbjct: 126 DWMRQEANRMGLYPK--DIFLISAAKKKNLDTLIDYLNKHSQDQ-DVYFVGTTNVGKSTL 182
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN + G +T + PGTTL + I L L DTPG+L ++ RL+ +
Sbjct: 183 INAIIDEMGDVQDLITTSRFPGTTLDQIEIP--LDNGHFLVDTPGILTDKQLASRLDPKD 240
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
+ +K L+P TY++ G + + GL R+D + + T++A+ + +H K E
Sbjct: 241 LDLASPKKPLKPATYQLLPGNTIFLAGLGRIDYLKGPSTSF--TIYAARGMYIHRTKTEK 298
Query: 535 ADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
ADE ++ HVG L PP G + S+L K ++ + S D+ AG+G+ + +
Sbjct: 299 ADEFYQKHVGELLSPP-GPN--SDLPPLKGQEYSIKYRS------DVLFAGVGFIT--VP 347
Query: 595 GEASLTLWTYDGIEITLREPLV 616
+ +T GI + R L+
Sbjct: 348 EGCVIKAYTPGGIGLGTRRALI 369
>gi|418035789|ref|ZP_12674231.1| hypothetical protein LDBUL1519_00931 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354689355|gb|EHE89353.1| hypothetical protein LDBUL1519_00931 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 378
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 185/400 (46%), Gaps = 44/400 (11%)
Query: 218 VERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRV 277
V +S+ K+L + + + E C RC LR+Y NE+ + + DF +
Sbjct: 22 VLQSQDKQLPGYLPASALAKVENGEREEVYCQRCFRLRHY----NEIMPVSLDNDDFLAL 77
Query: 278 IATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVL 337
+ T K ++V VVD DF + S K+ D +L
Sbjct: 78 LNTMAEK------KALIVNVVDLFDF-----SNSLISSLKRFVGTND----------FIL 116
Query: 338 VGTKVDLLPSQVSPTRLDRWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAG 396
VG K+DL P +++ W+R A + G PK ++L+SA K + L+ ++ + +
Sbjct: 117 VGNKLDLFPKNSKESKIKDWMRQEANRMGLYPK--DIFLISAAKKKKLDTLIDYLNKHSQ 174
Query: 397 PRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
+ +V+ +G N GKSTLIN + G +T + PGTTL + I L L D
Sbjct: 175 DQ-DVYFVGTTNVGKSTLINAIIDEMGDVQDLITTSRFPGTTLDQIEIP--LDNGHFLVD 231
Query: 457 TPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIY 516
TPG+L ++ RL+ + + +K L+P TY++ G + + GL R+D + +
Sbjct: 232 TPGILTDKQLASRLDPKDLDLASPKKPLKPATYQLLPGNTIFLAGLGRIDYLKGPSTSF- 290
Query: 517 VTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDV 576
T++A+ + +H K E ADE ++ HVG L PP G + S+L K ++ + S
Sbjct: 291 -TIYAARGMYIHRTKTEKADEFYQKHVGELLSPP-GPN--SDLPPLKGQEYSIKYRS--- 343
Query: 577 NGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
D+ AG+G+ + + + +T GI + R L+
Sbjct: 344 ---DVLFAGVGFIT--VPEGCVIKAYTPGGIGLGTRRALI 378
>gi|157364447|ref|YP_001471214.1| HSR1-like GTP-binding protein [Thermotoga lettingae TMO]
gi|157315051|gb|ABV34150.1| GTP-binding protein HSR1-related [Thermotoga lettingae TMO]
Length = 367
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 178/381 (46%), Gaps = 51/381 (13%)
Query: 237 EAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVM 296
+ ++ +G+ +C RC +R+YG++++ N DF + ++ + K V+V
Sbjct: 27 QKRRAEGKDILCQRCFRMRHYGKLESVKITN-----DFAKRLSKLVRKFE------VIVW 75
Query: 297 VVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR 356
V+D DF+G + A+ L K L K+++V K+DLLP V+ +
Sbjct: 76 VLDISDFEGSYDPLLAEIL--------------KDLNKIIVV-NKIDLLPKAVTIREIKS 120
Query: 357 WVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN 416
WV R K + VYL SA K+ G R+LL + NV +G N GKS++
Sbjct: 121 WVEERLKG---QRFRDVYLTSAAKNYGTRSLLRALSLYE----NVIFVGMTNVGKSSI-- 171
Query: 417 TFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQK 476
F K GV V+ P PGTTL +++ ++DTPG+ + L QK
Sbjct: 172 -FQKLTGVDVN---VTPFPGTTLDLIKAT---VKNTDIFDTPGIFSNRRIIDFLEPGSQK 224
Query: 477 MVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENAD 536
+ +K L T++ + GQ + +GGL RLD + ++AS +V H+ AD
Sbjct: 225 KIS-QKSLSRMTFKPQKGQTIFIGGLCRLDFSFDTELPPIFQIFASESVKFHVTSTSKAD 283
Query: 537 EIWKNHVGIRLQPPIG-QDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKG 595
+ G L PP ++ + + WK+ + +++ G ++A AGLGW S+ +G
Sbjct: 284 NLHVKQYGRLLVPPFKPKELSMDSLNWKEEEFELN------TGEELAIAGLGWLSVR-RG 336
Query: 596 EASLTLWTYDGIEITLREPLV 616
+ T + + + R+ LV
Sbjct: 337 PFKAKVKTINDVIVKKRKALV 357
>gi|104774345|ref|YP_619325.1| GTP-binding protein YqeH [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514440|ref|YP_813346.1| GTP-binding protein YqeH [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|103423426|emb|CAI98299.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
gi|116093755|gb|ABJ58908.1| Predicted GTPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 369
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 179/382 (46%), Gaps = 46/382 (12%)
Query: 238 AQKEKGEV--TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVV 295
A+ E GE C RC LR+Y NE+ + + DF ++ T K ++V
Sbjct: 31 AKVENGEREEVYCQRCFRLRHY----NEIMPVSLDNDDFLALLNTMAEK------KALIV 80
Query: 296 MVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLD 355
VVD DF + S K+ D +LVG K+DL P +++
Sbjct: 81 NVVDLFDF-----SNSLISSLKRFVGTND----------FILVGNKLDLFPKNSKESKIK 125
Query: 356 RWVRHRA-KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
W+R A + G PK ++L+SA K + L+ ++ + + + +V+ +G N GKSTL
Sbjct: 126 DWMRQEANRMGLYPK--DIFLISAAKKKKLDTLIDYLNKHSQDQ-DVYFVGTTNVGKSTL 182
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
IN + G +T + PGTTL + I L L DTPG+L ++ RL+ +
Sbjct: 183 INAIIDEMGDVQDLITTSRFPGTTLDQIEIP--LDNGHFLVDTPGILTDKQLASRLDPKD 240
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
+ +K L+P TY++ G + + GL R+D + + T++A+ + +H K E
Sbjct: 241 LDLASPKKPLKPATYQLLPGNTIFLAGLGRIDYLKGPSTSF--TIYAARGMYIHRTKTEK 298
Query: 535 ADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
ADE ++ HVG L PP G + S+L K ++ + S D+ AG+G+ + +
Sbjct: 299 ADEFYQKHVGELLSPP-GPN--SDLPPLKGQEYSIKYRS------DVLFAGVGFIT--VP 347
Query: 595 GEASLTLWTYDGIEITLREPLV 616
+ +T GI + R L+
Sbjct: 348 EGCVIKAYTPGGIGLGTRRALI 369
>gi|403339447|gb|EJY68983.1| hypothetical protein OXYTRI_10400 [Oxytricha trifallax]
Length = 874
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 197/412 (47%), Gaps = 62/412 (15%)
Query: 247 VCARCHSLRNYGQVKNE-------------VAENLIPDFDFDRVIATRLMKPSGNANAGV 293
+C RCH+L+++ ++ + V + + D +++ L S +
Sbjct: 443 ICQRCHNLKHHQKLIDHKGSLPSSYAGSTTVLADHVGKMDRQKILDGVL---SSIYPRSI 499
Query: 294 VVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTR 353
++ V+D +F+G +++E +D ++++ +L+LV K+D LP S R
Sbjct: 500 IIKVIDITNFEG-----------SQIDEIIED--VNQRRHRLILVVNKIDALPDGFSVLR 546
Query: 354 LDRWVRHRAKAGGAPKLN-GVYLVSARKDLGVRN---LLAFIKELAGPRG---NVWVIGA 406
L +WV+ + + K+ + + SAR GV +L+FIK+ P+ V+V+G+
Sbjct: 547 LQKWVKDQIDHKISDKIKYNICMTSARAATGVNKVMEILSFIKKEFDPQAYLPKVYVVGS 606
Query: 407 QNAGKSTLINTFAKKEG-----------VKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
N+GKS+ IN K K S LTE+ +PGTTL ++ + + K
Sbjct: 607 TNSGKSSFINAMIYKSNKHKEPNKIHYKSKYSILTESAVPGTTLEMVNVEDVRLG-FKFL 665
Query: 456 DTPGLLHPHLMSM-RLNRDEQKMVEIRKELQPRTY--RVKGGQAVHVGGLMRLDLDQASV 512
DTPG+ P+L + L D Q ++ + + Q +Y ++ G +V +GGL R+D S
Sbjct: 666 DTPGV--PNLNQVSSLVEDYQDLITLLPQKQMMSYPLNMRSGYSVFLGGLARVDF--LSG 721
Query: 513 ETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGT 572
+ Y T +P++++H I A ++++ G L+P D + + ++ ++
Sbjct: 722 DDKYFTFIVAPHLTIHKTPILRAPDVFQKQAGNLLRPSYSAD--PDKVKFIQHEIGLNCD 779
Query: 573 SWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLR-EPL----VLDR 619
++ DI+ GLGWFS+ +G +L L ++ +R PL VLD+
Sbjct: 780 NFKEANFDISIEGLGWFSIQGRGFCNLMLHIPPEVKYHIRNSPLMPFEVLDK 831
>gi|383787213|ref|YP_005471782.1| ribosome biogenesis GTPase YqeH [Fervidobacterium pennivorans DSM
9078]
gi|383110060|gb|AFG35663.1| ribosome biogenesis GTPase YqeH [Fervidobacterium pennivorans DSM
9078]
Length = 370
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 184/380 (48%), Gaps = 57/380 (15%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
E+G+ VC RC L++YG + +E E+ I +F +MK +V + D
Sbjct: 32 EEGKEIVCQRCFKLKHYGMLVSEADEDEIMEF---------IMKAIKKFKH--IVYIFDV 80
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
DF+G + + L ++ V K D LP VS ++L W++H
Sbjct: 81 FDFEGTYRPEIVELL---------------SGANVLYVANKFDTLPKTVSGSQLKEWLKH 125
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
R A K + +++ S + G+ L KEL +G+ V+G N GKS+L+
Sbjct: 126 RIPA----KSSEIFITSTKNGFGISKLK---KELENLKGSALVLGVTNVGKSSLL----- 173
Query: 421 KEGVKVSKLTEAPIPGTTLGIL--RIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMV 478
+ + S T +P PGTT+G++ R+G + KL+D+PG++ M + + Q +
Sbjct: 174 -KAITNSSATISPYPGTTIGLIEHRLGSL-----KLFDSPGIVVNDRMIDLFDPECQSKI 227
Query: 479 EIRKELQPRTYRVKGGQAVHVGGLMRL--DLDQASVETIYVTVWASPNVSLHLGKIENAD 536
+ E+ +T++ + + VGGL ++ + +++ I+ ++A NV+ H K +N
Sbjct: 228 LAKGEVTRKTFKPFPEETIFVGGLCQIKAKMKDSNLRPIF-QIFAPENVTFHKTKNQNFL 286
Query: 537 EIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
+ + H G L PP G+ ++ ++K+ K+ V D++ +++ +GL W ++ +G
Sbjct: 287 QNYPKHFGKLLFPPCGKMDVEKI-SFKEEKVVV-----DIDQ-ELSISGLCWINVK-RGP 338
Query: 597 ASLTLWTYDGIEITLREPLV 616
T+ + + I +RE L+
Sbjct: 339 VEFTITVPENVRIYVREALM 358
>gi|375089692|ref|ZP_09736017.1| ribosome biogenesis GTPase YqeH [Facklamia languida CCUG 37842]
gi|374566539|gb|EHR37778.1| ribosome biogenesis GTPase YqeH [Facklamia languida CCUG 37842]
Length = 380
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 169/373 (45%), Gaps = 48/373 (12%)
Query: 248 CARCHSLRNYGQVKN-EVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
C RC LR+Y ++ EV+E + D S +VV VVD D +G
Sbjct: 52 CQRCFRLRHYNELHPVEVSEEVFRDH-----------LSSLADEEALVVKVVDIFDVEGS 100
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
++ + K+ V+V K+DLLP V R+ W++ + G
Sbjct: 101 LISGFSRIIGKQ---------------PFVVVANKMDLLPKSVKANRVKHWLKECLRENG 145
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
+ + L+SA K+ + L IK A NV+++G N GKSTL+N + G +
Sbjct: 146 LIA-SEILLLSAHKESTLHPLFDLIKT-ALKTKNVYLVGVTNVGKSTLMNQLIRHFGGEQ 203
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+T + PGTTL + I + + + DTPG++ H ++ L+R K + K ++P
Sbjct: 204 GVITTSNHPGTTLDKIVIP--VTDQTAIIDTPGIIQSHQLAHYLDRRGVKNILPSKRIKP 261
Query: 487 RTYRVKGGQAVHVGGLMRLDL---DQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
+T+++ Q + + GL ++D D+ S T +AS ++ LH K+ A + H
Sbjct: 262 KTFQLNPEQTLFLAGLAQIDFLAGDKTS-----FTCYASNDLYLHRSKLAGASDFLSKHQ 316
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP D+ E ++ T + D+A +GLGW + K L +W
Sbjct: 317 GDLLSPPY-TDQLVEFPE------MIAHTVFLEPNQDLAISGLGWICVNQK--VQLKVWI 367
Query: 604 YDGIEITLREPLV 616
GI ++R+ L+
Sbjct: 368 PKGIHFSIRQALI 380
>gi|154249877|ref|YP_001410702.1| HSR1-like GTP-binding protein [Fervidobacterium nodosum Rt17-B1]
gi|154153813|gb|ABS61045.1| GTP-binding protein HSR1-related [Fervidobacterium nodosum Rt17-B1]
Length = 376
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 179/388 (46%), Gaps = 51/388 (13%)
Query: 237 EAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVM 296
E + ++G+ +C RC L++YG + EV E+ I DF R T+ +
Sbjct: 35 ERRLKEGKEILCQRCFKLKHYGMLVGEVDEDEI--IDFLRKTVTKFRN---------FMY 83
Query: 297 VVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR 356
V+D DF+G + E KD ++ V K D+LP VS +L +
Sbjct: 84 VLDIFDFEGTYRPEIN-------EMIKDK--------NVIYVVNKFDILPKSVSGAQLKK 128
Query: 357 WVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN 416
W+ R + + +++ S + + G+ L +++ L RG + V+G N GKS+L+
Sbjct: 129 WLTDRINNANS---DNIFITSTKNEFGISKLKKYLENL---RGEMLVLGVTNVGKSSLLK 182
Query: 417 TFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQK 476
SK+T +P PGTT+GI++ K+YDTPG++ M + + Q
Sbjct: 183 KLTN------SKVTVSPYPGTTIGIVKHKL---KNLKVYDTPGIIVNDRMIDLFDAECQA 233
Query: 477 MVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETI--YVTVWASPNVSLHLGKIEN 534
+ + E+ +T++ + + +GGL ++ + E++ ++A NVS H K +N
Sbjct: 234 KILAKGEVNRKTFKPYPEEVIFIGGLCKISAKMKNEESLRPIFQIFAPENVSFHKTKNKN 293
Query: 535 ADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
+ + + G L PP + S L +K+ ++V+ G +++ GL W ++ +
Sbjct: 294 FIDNFPKYFGKELVPPCKKMDISGL-NFKNLSIEVN------EGFELSIPGLCWINIK-R 345
Query: 595 GEASLTLWTYDGIEITLREPLVLDRAPF 622
G ++ + + + +R L+ + F
Sbjct: 346 GPVQFDVYLPENVSVYIRPSLIQPKRKF 373
>gi|401406948|ref|XP_003882923.1| Predicted GTPases (ISS), related [Neospora caninum Liverpool]
gi|325117339|emb|CBZ52891.1| Predicted GTPases (ISS), related [Neospora caninum Liverpool]
Length = 839
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 183/411 (44%), Gaps = 61/411 (14%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKN--EVAEN----LIPDFDFDRVI--ATRLMKPSGNANA 291
+++ + +C RC+ ++ Y Q+ E A N L+P + + V+ + MK
Sbjct: 228 RKRTRLLLCRRCYRIQMYKQLDGQWEAAANAQDALLPSLEPETVVNAIVKTMK-----KD 282
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
VV+ +VD D + LF+ A SK+L + L+ ++D LP
Sbjct: 283 SVVLKLVDVCDLESS----VVPELFQ--------ACRSKRLHVIWLI-NRIDCLPRTAQK 329
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRG---------NVW 402
+ WVR + ++ LVS+ G +L ++ L P ++
Sbjct: 330 REVKEWVRRMVRQIDNVHIDDCILVSSATGEGFEDLERRLEHLLVPAPGGVSAVEGRRIY 389
Query: 403 VIGAQNAGKSTLINTF-----AKKEGVKVSK-----LTEAPIPGTTLGILRIGGILPAKA 452
V+G NAGKST + F K G K +T + +PGTTL L G LP
Sbjct: 390 VVGRVNAGKSTFVTRFLKFINYKHAGTIFMKRASGGVTRSAMPGTTLSFLPFG--LPKDF 447
Query: 453 KLYDTPGLLHPHLMS--MRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQA 510
KL DTPG+ H ++ +R D +V K LQP TY V G+++ +G + R+DL Q
Sbjct: 448 KLIDTPGIPSRHQVTSLLRFAADLYSIVP-SKRLQPITYAVTEGKSLLIGAMARIDLAQG 506
Query: 511 SVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQP---PIGQDRASELGTWKDRKL 567
S T +T + S ++LH+ K A ++ L P P G DR L +
Sbjct: 507 S--TALITCYFSHKITLHICKTVKAADLLSRKACTFLYPPHLPAGFDRLQPLVRHSVKVH 564
Query: 568 KVSGTSWDVNGIDIAAAGLGWFSL-GLKGEASLTLWTYDGIEITLREPLVL 617
+ T++D DI+ AGLGW S+ G G L +W G++I R P +L
Sbjct: 565 AGNSTAYD----DISIAGLGWISVAGAAGPKELHVWAPQGVKI-FRRPAML 610
>gi|225466135|ref|XP_002268388.1| PREDICTED: nitric oxide synthase 1 [Vitis vinifera]
gi|296084222|emb|CBI24610.3| unnamed protein product [Vitis vinifera]
Length = 564
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 186/392 (47%), Gaps = 57/392 (14%)
Query: 230 ERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGN- 288
E KKK R+ + +C RC L ++GQ+ V N + A L + +
Sbjct: 133 ELKKKHRQLR-----TVLCGRCR-LLSHGQMITAVGGNGGYSGGKQFISAEELREKLSHL 186
Query: 289 -ANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPS 347
++V +VD VDF+G F L +D A + ++LV TKVDLLP
Sbjct: 187 RHEKALIVKLVDIVDFNGSF-----------LAHVRDLAGANP----IILVVTKVDLLPK 231
Query: 348 QVSPTRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIG 405
+ + WV +A KLN V+L S++ +G+ + + I++ R NV+++G
Sbjct: 232 ETDLNCVGDWV---VEATMKKKLNVLSVHLTSSKSLVGISGVASEIQKEKKGR-NVYILG 287
Query: 406 AQNAGKSTLINTFAKKEG--------VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
+ N GKS IN K + K ++ +PGTTLG ++I L KLYDT
Sbjct: 288 SANVGKSAFINALLKMMAQRDPAAAAAQRYKPIQSAVPGTTLGPIQIDAFL-GGGKLYDT 346
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTY-------------RVKG----GQAVHVG 500
PG+ H + ++ ++ + R L+ + + R+K G ++ G
Sbjct: 347 PGVHLHHRQAAVVHSEDLPALAPRSRLRGQCFPNFQVAFDDSTLSRIKSNGLNGFSIFWG 406
Query: 501 GLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-L 559
GL+R+D+ + +T +T + +++H+ + ADE ++ +G+ L PP G+ RA + L
Sbjct: 407 GLVRIDIVKVLPQT-RLTFYGPKALNIHMVPTDKADEFYQKELGVLLTPPTGKQRAEDWL 465
Query: 560 GTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
G +R+L++ D D+A +GLGW ++
Sbjct: 466 GLETERQLQIKFEDSDRPACDLAISGLGWIAV 497
>gi|406671275|ref|ZP_11078514.1| ribosome biogenesis GTPase YqeH [Facklamia hominis CCUG 36813]
gi|405580525|gb|EKB54584.1| ribosome biogenesis GTPase YqeH [Facklamia hominis CCUG 36813]
Length = 374
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 169/362 (46%), Gaps = 41/362 (11%)
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAE-NLIPDFDFDRVIATRLMKPSGNANAGVVVMVVD 299
EKG+ C RC LR+Y NE+++ L DF D++ + +++ V+D
Sbjct: 40 EKGDF-YCQRCFRLRHY----NELSDLELDEDFFLDKLRKI-------TDDQALIIHVID 87
Query: 300 CVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
D +G + L +D+ ++++ KVDLLP V+ +RL W+
Sbjct: 88 IFDIEGSLLTSLPRLL------GQDN---------IIVIANKVDLLPKSVNRSRLTHWLM 132
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
++ G K V L S ++ G+ L+ I R +++++G N GKSTL+N
Sbjct: 133 QYIRSLGL-KPKQVILASGKQANGIEGLVEVINHFIQDR-DIYLVGITNVGKSTLLNRLI 190
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
+ G +T + PGTTL ++RI L + L DTPG + + L+R V
Sbjct: 191 QHYGGDQEVITTSNHPGTTLDLIRIP--LSEEYGLVDTPGFVKKDQWAHYLSRRSYGQVI 248
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
+K ++PR +++ Q + + GL ++D + + + V + ++ LH K+E A + +
Sbjct: 249 PQKPIKPRVFQLNPKQTLFLAGLCQIDFVEGERTSFILNV--ANDLYLHRSKLEKAADFY 306
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
K H L PP ++R S + W+ L V D+ GLGW ++ + + ++
Sbjct: 307 KAHCDDLLMPPTAKER-SLIPQWQAHHLTVKSDQ------DLVIPGLGWIAVNERVQVNV 359
Query: 600 TL 601
L
Sbjct: 360 QL 361
>gi|372325415|ref|ZP_09520004.1| GTP-binding protein YqeHrequired for biogenesis of 30S ribosome
subunit [Oenococcus kitaharae DSM 17330]
gi|366984223|gb|EHN59622.1| GTP-binding protein YqeHrequired for biogenesis of 30S ribosome
subunit [Oenococcus kitaharae DSM 17330]
Length = 384
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 43/367 (11%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC LR+Y Q++ E+ F ++++ K + +V+ ++D D G
Sbjct: 58 LCERCFKLRHYNQIQPVALES----SHFQKILSAIADKKA------LVLYLIDLFDVSGS 107
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
++ + +V+VG K D+LP V +L W++ A G
Sbjct: 108 MINGISRFIGNN---------------PIVIVGNKADVLPKSVKKHKLADWLQREAGKQG 152
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
+ + L + + D G LL I + ++V+G N GKSTLIN K K
Sbjct: 153 IQAVRTIVLSADKGDAG-ETLLNEIDDYLDRYPEIYVVGVTNVGKSTLINQIIKALSGKG 211
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
S +T + PGTTL RI L K + DTPG++H M+ ++ + K + KE++
Sbjct: 212 SVITTSRFPGTTLD--RIVIPLTEKTAIIDTPGIIHASQMTHVVSPKDYKYLLPNKEIKA 269
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
RT++++ GQ + G L +D + + I +T + N+ LH GK E + + ++ G
Sbjct: 270 RTFQLQSGQTIFFGSLGWMDF--LNRQNISITAYFENNLMLHRGKTEKSSDFFRLQAGKT 327
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
L P W +++KV + G D+ +GLGW + + ++ L G
Sbjct: 328 LLPI-----TESAMDWISQEIKV------LPGQDVVISGLGWVT--FRNSTTIRLHLPKG 374
Query: 607 IEITLRE 613
+ ++R+
Sbjct: 375 VAFSVRQ 381
>gi|150020690|ref|YP_001306044.1| HSR1-like GTP-binding protein [Thermosipho melanesiensis BI429]
gi|149793211|gb|ABR30659.1| GTP-binding protein, HSR1-related [Thermosipho melanesiensis BI429]
Length = 357
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 171/376 (45%), Gaps = 57/376 (15%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC+ + +YG++ V E + D +L K + N V+ VVD DF+G
Sbjct: 33 LCQRCYRIIHYGKLTVPVEEEIFLD---------KLNKVLKDFNK--VIYVVDITDFEGT 81
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
F K + L K ++ TK DLLPS +S W++ R
Sbjct: 82 FRKEIMEKLKNK---------------EVYFAVTKFDLLPSFLSSIEAQEWLKKRLGVSS 126
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
++L+S+ G+R + F+K L + ++ ++G N GKS+LI+ F
Sbjct: 127 ----EYIFLLSSVNKFGLRKIEKFLKNL---KEDILILGVTNVGKSSLISHFTD------ 173
Query: 427 SKLTEAPIPGTTLGIL--RIGGILPAKAKLYDTPGLL-HPHLMSMRLNRDEQKMVEIRKE 483
+ T +P PGTTLGI+ RI GI LYDTPG+L H ++ + L+ D Q + K
Sbjct: 174 ANPTISPFPGTTLGIMKRRIFGI-----NLYDTPGILTHDRIIDL-LSPDCQAKILNTKR 227
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L +T+++ +AV V +++++ + ++ V+ H K E ADE+ +N
Sbjct: 228 LTRKTFKIDSTRAVLVSAYCKIEVEYDMGKKPIFQIFTPEKVTFHETKKERADELMRNRA 287
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
G L PP +++ D + D ++A GLG+ ++ +G L +
Sbjct: 288 GDLLVPPCKKEKL-------DFEFVTHEIEVDEEK-EVAITGLGFLNVK-RGPFLLKITV 338
Query: 604 YDGIEITLREPLVLDR 619
GI I R L+ R
Sbjct: 339 PKGIRIIKRNRLLKPR 354
>gi|218288657|ref|ZP_03492934.1| Nitric-oxide synthase [Alicyclobacillus acidocaldarius LAA1]
gi|218241314|gb|EED08489.1| Nitric-oxide synthase [Alicyclobacillus acidocaldarius LAA1]
Length = 396
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 172/362 (47%), Gaps = 42/362 (11%)
Query: 237 EAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVM 296
E+ E+ +V +C RC +R+YG + + + ++R +A +P G+V+
Sbjct: 27 ESHLEREDV-LCRRCFRIRHYG----DFTPIAVDEDTYERQVAAIFDRP------GLVLY 75
Query: 297 VVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR 356
VVD D G A + + A D +++V KVDLLP+ V L
Sbjct: 76 VVDVFDLAGSLIPSARRFV------ASSD---------VIVVVNKVDLLPADVGYEALAD 120
Query: 357 WVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFI-KELAGPRGNVWVIGAQNAGKSTLI 415
W+R +A G L+ V +SA K GV L+ + +E P V+VIG N GKSTL+
Sbjct: 121 WIRGEVRATGVEPLD-VAFISAEKRRGVDRLVDRVARETERP---VYVIGMANVGKSTLL 176
Query: 416 NTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMSMRLNRDE 474
N ++ + T + PGTTL + R+ P + +L+DTPGL++ + RL D
Sbjct: 177 NAMVERLSERKQPFTVSRRPGTTLAMSRLEIEGPYGRVELFDTPGLMYTSRVIERLCGDC 236
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
K V R ++PR Y++ GQA+ +GGL+RL+ + I ++ S + +H K E
Sbjct: 237 LKWVVPRTRVRPRVYQLNPGQALFLGGLVRLETLGGERQGI--VLYVSNELPVHRTKRER 294
Query: 535 ADEIWKNHVGIRLQPPIG------QDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
AD+ + +H L+ P DR S L R + + S G DI GLGW
Sbjct: 295 ADQFFADHRYDILKVPCEACADAFADRRSWLVAAPPR--RDADFSLGKRGGDIVLPGLGW 352
Query: 589 FS 590
+
Sbjct: 353 IA 354
>gi|290793111|gb|ADD63989.1| nitric oxide synthase-associated protein I [Solanum tuberosum]
Length = 561
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 202/434 (46%), Gaps = 72/434 (16%)
Query: 232 KKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA 291
KKK + +K +C RC L ++G + V N V A L + +
Sbjct: 132 KKKHHQLRK-----ILCGRCR-LLSHGHMITAVGGNGGYSGGKQFVTAEELREKLSHVRH 185
Query: 292 --GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQV 349
++V +VD VDF+G F L +D A + ++LV TKVDLLP
Sbjct: 186 EKALIVKLVDIVDFNGSF-----------LARVRDLAGANP----IILVITKVDLLPKDT 230
Query: 350 SPTRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQ 407
+ WV +A KLN V+L S++ +G+ +++ I++ R +V+++G+
Sbjct: 231 DLNCVGDWV---VEATMKKKLNVLSVHLTSSKSLVGISGVVSEIQKEKKGR-DVYILGSA 286
Query: 408 NAGKST----LINTFAKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPG 459
N GKS L+NT K+ V S K ++ +PGTTLG + I L + KLYDTPG
Sbjct: 287 NVGKSAFINALLNTMPYKDPVAASARKYKPIQSAVPGTTLGPIPIDAFLGGE-KLYDTPG 345
Query: 460 LLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKG-----------------GQAVHVGGL 502
+ H + ++ ++ + + L+ + + G G ++ GGL
Sbjct: 346 VHLHHRQAAVIHVEDLPTLAPQSRLRGQVFPSSGQNLDSQIANRMRSSGLSGLSIFWGGL 405
Query: 503 MRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-LGT 561
+R+D+ + ET +T + + +H+ E ADE ++ +G+ L PP G+++A + +G
Sbjct: 406 VRIDVLKVLPETC-LTFYGPKALQIHVVPTEEADEFYQKELGVLLTPPTGKEKADDWMGL 464
Query: 562 WKDRKLKVSGTSWDVNGIDIAAAGLGWFSL-------GL--------KGEASLTLWTYDG 606
R+L++ + D+A +GLGWFS+ G+ GE + +
Sbjct: 465 ETKRQLQIKYEDIERPTCDVAISGLGWFSVVPVNKSAGIFNPVSEVKAGELTFIVHVPKP 524
Query: 607 IEITLREPLVLDRA 620
+EI +R P+ + +A
Sbjct: 525 VEIFVRSPMPVGKA 538
>gi|417905371|ref|ZP_12549182.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21269]
gi|341843647|gb|EGS84869.1| ribosome biogenesis GTPase YqeH [Staphylococcus aureus subsp.
aureus 21269]
Length = 261
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 136/260 (52%), Gaps = 30/260 (11%)
Query: 342 VDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN- 400
+DLLP Q++ R+ W++ A+ G + V L+SA K G+ +LL+ I A R N
Sbjct: 1 MDLLPKQINKRRVKEWLKRTARKYGLED-DDVVLISAEKGWGIDDLLSSI---ANIRENE 56
Query: 401 -VWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPG 459
V+++G N GKSTLIN + + +T + PGTTL ++ I L + +YDTPG
Sbjct: 57 DVYIVGTTNVGKSTLINKLIEASVGEKDVVTTSRFPGTTLDMIDIP--LDETSFMYDTPG 114
Query: 460 LLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTV 519
++ H M+ ++ E K++ +KE++ R Y++ Q + GGL R+D +
Sbjct: 115 IIQDHQMTHLVSEKELKIIMPKKEIKQRVYQLNEAQTLFFGGLARIDYVSGGKRPL--VC 172
Query: 520 WASPNVSLHLGKIENADEIWKNHVGIRLQPP-------IGQDRASELGTWKDRKLKVSGT 572
+ S ++++H K E A+++W+N +G L PP + +A L T K+++
Sbjct: 173 FFSNDLNIHRTKTEKANDLWRNQLGDLLTPPGNPQNFDFNEVKAVRLETGKEKR------ 226
Query: 573 SWDVNGIDIAAAGLGWFSLG 592
D+ +GLG+ ++G
Sbjct: 227 -------DVMISGLGFITIG 239
>gi|258511984|ref|YP_003185418.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478710|gb|ACV59029.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 396
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 171/362 (47%), Gaps = 42/362 (11%)
Query: 237 EAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVM 296
E+ E+ +V +C RC +R+YG + + + + R +A +P G+V+
Sbjct: 27 ESHLEREDV-LCRRCFRIRHYG----DFTPIAVDEETYQRQVAAIFDRP------GLVLY 75
Query: 297 VVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR 356
VVD D G A + + A D +++V KVDLLP+ V L
Sbjct: 76 VVDVFDLAGSLIPSARRFV------ASSD---------VIVVVNKVDLLPTDVGYEALAD 120
Query: 357 WVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFI-KELAGPRGNVWVIGAQNAGKSTLI 415
W+R +A G L+ V +SA K GV L+ + +E P V+VIG N GKSTL+
Sbjct: 121 WIRGEVRATGVEPLD-VAFISAEKRRGVDRLVDRVARETKRP---VYVIGMANVGKSTLL 176
Query: 416 NTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMSMRLNRDE 474
N ++ + T + PGTTL + R+ P + +L+DTPGL++ + RL D
Sbjct: 177 NAMVERLSERKQPFTVSRRPGTTLAMSRLEIEGPYGRVELFDTPGLMYTSRVIERLCGDC 236
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
K V R ++PR Y++ GQA+ +GGL+RL+ + I ++ S + +H K E
Sbjct: 237 LKWVVPRTRVRPRVYQLNPGQALFLGGLVRLETLGGERQGI--VLYVSNELPVHRTKRER 294
Query: 535 ADEIWKNHVGIRLQPPIG------QDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
AD+ + +H L+ P DR S L R + + S G DI GLGW
Sbjct: 295 ADQFFADHRYDILKVPCEACADAFADRRSWLVAAPPR--RDADFSLGKRGGDIVLPGLGW 352
Query: 589 FS 590
+
Sbjct: 353 IA 354
>gi|357138391|ref|XP_003570776.1| PREDICTED: putative nitric oxide synthase-like [Brachypodium
distachyon]
Length = 562
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 173/364 (47%), Gaps = 56/364 (15%)
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
++V +VD VDF+G F L +D A + +VLV TKVDLLP
Sbjct: 197 ALIVKLVDIVDFNGSF-----------LARIRDFAGANP----IVLVITKVDLLPRDTDL 241
Query: 352 TRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNA 409
+ WV +A KLN V+L S++ +G+ +++ I++ R +V+++G+ N
Sbjct: 242 NCIGDWV---VEAVVRKKLNVLSVHLTSSKSLVGITGVISEIQQEKKAR-DVYILGSANV 297
Query: 410 GKSTLIN----TFAKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLL 461
GKS I+ T A K+ V + K ++ +PGTTLG ++I L KLYDTPG+
Sbjct: 298 GKSAFISAMLKTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFL-GGGKLYDTPGVH 356
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTYRVK------GGQAVHVGGLMRLDLDQASVETI 515
H + ++ D+ + + L+ R + G + GGL+R+D+ +A T
Sbjct: 357 LHHRQAAVIHADDLPSLAPQSRLKGRCFPANDTDVGLSGNTLFWGGLVRIDVVKALPRT- 415
Query: 516 YVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-LGTWKDRKLKVSGTSW 574
+ + +++++ ADE ++ VG+ L PP GQ+RA G R+L++
Sbjct: 416 RLAFYGPKKLNINMVPTTEADEFYEREVGVTLTPPTGQERAEGWCGLQGVRELQIKYEEL 475
Query: 575 DVNGIDIAAAGLGWFSL------------------GLKGEASLTLWTYDGIEITLREPLV 616
D DIA +GLGW ++ G GE L + +E+ +R PL
Sbjct: 476 DRPACDIAISGLGWITVEPLGVPSSDPDGSAEEEGGAMGELHLRVHVPKPVEVFVRAPLP 535
Query: 617 LDRA 620
+ +A
Sbjct: 536 VGKA 539
>gi|253574707|ref|ZP_04852047.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. oral taxon 786
str. D14]
gi|251845753|gb|EES73761.1| ribosome biogenesis GTPase YqeH [Paenibacillus sp. oral taxon 786
str. D14]
Length = 375
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 174/378 (46%), Gaps = 36/378 (9%)
Query: 239 QKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVV 298
Q E +C RC ++NY NE + + +F RL+ G+ A +V+ +V
Sbjct: 34 QALSKEPVICQRCFRIKNY----NESSSVTVEQDEF-----LRLLSQIGSKEA-LVIHIV 83
Query: 299 DCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWV 358
D DF G S+ L+ + P L+ V K DLLP + ++ WV
Sbjct: 84 DLFDFHG--------SVITGLQ------RFVGNNPVLLAV-NKTDLLPKVTNWNKVRNWV 128
Query: 359 RHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF 418
+ AK G K+ V L SA+++ G LL + G R +V+V+GA N GKSTLIN
Sbjct: 129 QKEAKDLGL-KIEDVVLCSAKQNSGFDRLLDAVAARRGDR-DVYVVGATNVGKSTLINRL 186
Query: 419 AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMV 478
+ +LT + PGTTL ++ I L + DTPG+++P S + + ++
Sbjct: 187 IRDYSDLDQELTVSRYPGTTLDMVHIP--LDDGRAIIDTPGIVYPSRYSELVAPSDLGVI 244
Query: 479 EIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEI 538
K L+P Y++ GQ + GG R D Q ++ T + + V +H K+ ADE+
Sbjct: 245 MPDKPLKPAVYQLNEGQTLFFGGFGRFDFIQGERQSF--TCFVNIRVPIHRTKLARADEL 302
Query: 539 WKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEAS 598
+ H G L PP ++ L W + ++ S D+ +GLGW + A
Sbjct: 303 FTEHAGELLSPP-SKEHIEALPEWTRHEFRIPKGSRS----DVFISGLGWIKINNDAGAV 357
Query: 599 LTLWTYDGIEITLREPLV 616
+ + G+++ +R L+
Sbjct: 358 VAMHVPKGVKVLVRPSLI 375
>gi|326519915|dbj|BAK03882.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 561
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 159/317 (50%), Gaps = 38/317 (11%)
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
++V +VD VDF+G F L +D A + +VLV TKVDLLP
Sbjct: 196 ALIVKLVDIVDFNGSF-----------LARIRDFAGANP----IVLVITKVDLLPRDTDL 240
Query: 352 TRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNA 409
+ WV ++ KLN V+L S++ +G+ +++ I++ R +V+++G+ N
Sbjct: 241 NCIGDWV---VESVVRKKLNVLSVHLTSSKSLVGITGVISEIQQEKKAR-DVYILGSANV 296
Query: 410 GKSTLIN----TFAKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLL 461
GKS I+ T A K+ V + K ++ +PGTTLG ++I L KLYDTPG+
Sbjct: 297 GKSAFISAMLKTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFL-GGGKLYDTPGVH 355
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTYRVK------GGQAVHVGGLMRLDLDQASVETI 515
H + ++ D+ + + L+ R + G + GGL+R+D+ +A T
Sbjct: 356 LHHRQAAVIHADDLPSLAPQSRLKGRCFPANDTDVGLSGNTLFWGGLVRIDIVKALPRT- 414
Query: 516 YVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-LGTWKDRKLKVSGTSW 574
+T + +S+++ ADE +K VG+ L PP GQ+RA G R+L++
Sbjct: 415 RLTFYGPKKLSINMVPTTEADEFYKREVGVTLTPPTGQERAEGWCGLQGVRELQIKYEEL 474
Query: 575 DVNGIDIAAAGLGWFSL 591
D DIA +GLGW ++
Sbjct: 475 DRPASDIAISGLGWIAV 491
>gi|449015954|dbj|BAM79356.1| similar to GTP-binding protein [Cyanidioschyzon merolae strain 10D]
Length = 674
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 201/436 (46%), Gaps = 62/436 (14%)
Query: 194 DEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHS 253
+DD D G+ PA R+ + K AE+ ++ VC RC
Sbjct: 259 QDDDPDAPGYLPA-------------RALRPKGQNAEKPLTSK----------VCQRCFH 295
Query: 254 LRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAK 313
L +Y ++ + + P+ F ++A P A VVV ++D +D +
Sbjct: 296 LTHYSKISAKGLTLMSPE-QFREILA-----PLAKQRA-VVVCMLDILDL--------SS 340
Query: 314 SLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKL-NG 372
S+ K++ + + + P LV++ K DLLPS V + +W+ R A G +
Sbjct: 341 SMLKEVSQLAN-----AQSPVLVVI-NKADLLPSSVKLGHIMQWIWKRCAASGMRRRPRA 394
Query: 373 VYLVSARKDLGVRNLLAFIKELA--GPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSK-- 428
VYL+SA + LG+R + + A +++++GA N GKSTL+N + SK
Sbjct: 395 VYLISAERGLGIRGFVQGLVAAARESRTDHIYIMGAANVGKSTLLNRIIRGHPGHGSKPT 454
Query: 429 --LTEAPIPGTTLGILRI---GGILPAKAKLYDTPGLLHPHLMSMRLNRD--EQKMVEIR 481
LT + +PGTTLG++R+ + + DTPG++ P +++ D E K + R
Sbjct: 455 RELTTSVVPGTTLGMVRLPLKNAATGERIVIMDTPGIVEPRRVNLLCLEDISEMKGILPR 514
Query: 482 KELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENA-DEIWK 540
+ L+ TYR++ G+++ +GGL+ + L A + + T + S V++H+ A +E ++
Sbjct: 515 RRLRGITYRLEQGKSLWLGGLVNIAL--AEGKPWFFTAYVSEQVTVHVSDASKALNETYR 572
Query: 541 -NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
V L P G L T + ++ V +W DI GLGW +L G ++
Sbjct: 573 VQSVKNGLLWPGGLR--VPLATVEPVRMCVEHGTWKRTCADIVIPGLGWVALLGSGSCTV 630
Query: 600 TLWTYDGIEITLREPL 615
+ G + +EPL
Sbjct: 631 HVRVAGGGTVWKQEPL 646
>gi|319937329|ref|ZP_08011736.1| hypothetical protein HMPREF9488_02571 [Coprobacillus sp. 29_1]
gi|319807695|gb|EFW04288.1| hypothetical protein HMPREF9488_02571 [Coprobacillus sp. 29_1]
Length = 366
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 181/373 (48%), Gaps = 43/373 (11%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
+C RC L+NY +++ N+ D DF +++ G + VV M+ D DF+G
Sbjct: 35 VLCQRCFQLKNYHKLQET---NMTKD-DF-----LTILQQIGEKDCLVVYMI-DLFDFNG 84
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
+ + + A +D ++++ K D+LP V +L+ WVR + K
Sbjct: 85 SMIQGLMRHI------AYND---------VLVLANKRDILPKSVKERKLEHWVRRQLKDQ 129
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK--EG 423
G ++ V + S +K + ++ I E R +V+V+G N GKST IN K E
Sbjct: 130 GVQAVD-VIVTSGKKSMNFDDIYDAIMEHRKGR-DVYVVGVTNVGKSTFINGLLKHYAEV 187
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
K + +T + PGTTL ++ I L + LYDTPG+++ M+ L ++ K V + E
Sbjct: 188 EKQNLITVSEYPGTTLNLIEIP--LDEHSVLYDTPGIINESQMTHLLAPEDIKKVVPQGE 245
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+P +++ Q ++ GGL R+D + E + S N+ +H K AD+++ H
Sbjct: 246 LRPMGFQLNSLQTLYFGGLGRIDYLEG--EQSSFIAYFSKNLKIHRTKTIKADDLYNRHQ 303
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
++ + G D +++ +++ R + G + DI +GLG+ ++ KG + +
Sbjct: 304 TLQYEIA-GIDSIAQMKSYEFRLM--PGKT------DIVISGLGFITVSSKG-GKVRVLV 353
Query: 604 YDGIEITLREPLV 616
I + LRE ++
Sbjct: 354 PPQISVILREAII 366
>gi|384135845|ref|YP_005518559.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339289930|gb|AEJ44040.1| ribosome biogenesis GTPase YqeH [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 389
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 169/362 (46%), Gaps = 42/362 (11%)
Query: 237 EAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVM 296
E+ E+ +V +C RC +R+YG + + + + R +A P G+V+
Sbjct: 20 ESHLEREDV-LCRRCFRIRHYG----DFTPVAVDEETYQRQVAAIFDHP------GLVLY 68
Query: 297 VVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR 356
VVD D G A + + A D +++V KVDLLP+ V L
Sbjct: 69 VVDVFDLAGSLIPSARRFV------ASSD---------VIVVVNKVDLLPADVGYEALAD 113
Query: 357 WVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFI-KELAGPRGNVWVIGAQNAGKSTLI 415
W+R +A G L+ V +SA K GV L+ + +E P V+V+G N GKSTL+
Sbjct: 114 WIRGEVRATGVEPLD-VAFISAEKRRGVDRLVDRVARETKRP---VYVMGMANVGKSTLL 169
Query: 416 NTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMSMRLNRDE 474
N ++ + T + PGTTL + R+ P + +L+DTPGL++ + RL D
Sbjct: 170 NAMVERLSERKQPFTVSRRPGTTLAMSRLEIEGPYGRVELFDTPGLMYTSRVIERLCGDC 229
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
K V R ++PR Y++ GQA+ +GGL+RL+ + + I ++ S + +H K E
Sbjct: 230 LKWVVPRSRVRPRVYQLNPGQALFLGGLVRLETLEGERQGI--VLYVSNELPVHRTKRER 287
Query: 535 ADEIWKNHVGIRLQPPIGQ------DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW 588
AD + H L+ P DR S L R + + S G DI GLGW
Sbjct: 288 ADSFFAEHRYDILKVPCEACADAFVDRRSWLVAAPPR--RDADFSLGKRGGDIVLPGLGW 345
Query: 589 FS 590
+
Sbjct: 346 IA 347
>gi|159885612|dbj|BAF93184.1| nitric oxide associated 1 [Nicotiana benthamiana]
Length = 568
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 198/434 (45%), Gaps = 72/434 (16%)
Query: 232 KKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGN--A 289
KKK + +K +C RC L ++G + V N V A L + +
Sbjct: 139 KKKHHQLRK-----VLCGRCR-LLSHGHMITAVGGNGGYSGGKQFVTAEELREKLSHLRH 192
Query: 290 NAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQV 349
++V +VD VDF+G F L +D A + ++LV TKVDLLP +
Sbjct: 193 EKALIVKLVDIVDFNGSF-----------LARVRDLAGANP----IILVITKVDLLPKET 237
Query: 350 SPTRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQ 407
+ WV +A KLN V+L S++ +G+ +++ I++ R +V+++G+
Sbjct: 238 DLNCVGDWV---VEATMKKKLNVLSVHLTSSKSLVGIAGVVSEIQKEKKGR-DVYILGSA 293
Query: 408 NAGKST----LINTFAKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPG 459
N GKS L+NT + + V + K ++ +PGTTLG + I L K+YDTPG
Sbjct: 294 NVGKSAFINALLNTMSYNDPVAATARKYKPIQSAVPGTTLGPIPIDAFL-GGGKVYDTPG 352
Query: 460 LLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKG-----------------GQAVHVGGL 502
+ H + ++ ++ + + L+ + + G G ++ GGL
Sbjct: 353 VHLHHRQAAVIHTEDLPTLAPQSRLRAQAFPSSGLKLESQIADRVRSSGLNGLSIFWGGL 412
Query: 503 MRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-LGT 561
+R+D+ + ET +T + + LH+ E ADE ++ +GI L PP G+++A +G
Sbjct: 413 VRIDVLKVLPETC-LTFYGPKALQLHMVPTEEADEFYQKELGILLTPPTGKEKADGWMGL 471
Query: 562 WKDRKLKVSGTSWDVNGIDIAAAGLGWFSL---------------GLKGEASLTLWTYDG 606
R+L++ + D+A +GLGW S+ GE + +
Sbjct: 472 ETKRQLQIKYEDIERPTCDVAISGLGWLSVIPVNKSVGTSDPVSEVTAGELTFVVHVPKP 531
Query: 607 IEITLREPLVLDRA 620
+EI +R PL + +A
Sbjct: 532 VEIFVRPPLPVGKA 545
>gi|115443669|ref|NP_001045614.1| Os02g0104700 [Oryza sativa Japonica Group]
gi|75131025|sp|Q6YPG5.1|NOS_ORYSJ RecName: Full=Putative nitric oxide synthase
gi|40363768|dbj|BAD06278.1| putative GTPase [Oryza sativa Japonica Group]
gi|41052546|dbj|BAD07538.1| putative GTPase [Oryza sativa Japonica Group]
gi|113535145|dbj|BAF07528.1| Os02g0104700 [Oryza sativa Japonica Group]
Length = 547
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 176/364 (48%), Gaps = 56/364 (15%)
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+++ +VD VDF+G F L +D A + ++LV TKVDLLP
Sbjct: 182 ALIIKLVDIVDFNGSF-----------LARVRDFAGANP----IILVITKVDLLPRDTDL 226
Query: 352 TRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNA 409
+ WV +A KLN V+L S++ +GV +++ I++ R +V+++G+ N
Sbjct: 227 NCIGDWV---VEAVVKKKLNVLSVHLTSSKSLVGVTGVISEIQQEKKGR-DVYILGSANV 282
Query: 410 GKSTLIN----TFAKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLL 461
GKS I+ T A K+ V + K ++ +PGTTLG ++I L KLYDTPG+
Sbjct: 283 GKSAFISAMLRTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFL-GGGKLYDTPGVH 341
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTYRVK------GGQAVHVGGLMRLDLDQASVETI 515
H + ++ D+ + + L+ R + G ++ GGL+R+D+ +A T
Sbjct: 342 LHHRQAAVIHADDLPSLAPQSRLRARCFPANDTDVGLSGNSLFWGGLVRIDVVKALPRT- 400
Query: 516 YVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-LGTWKDRKLKVSGTSW 574
+T + + +++ ADE ++ VG+ L PP G+++A +G R+L++
Sbjct: 401 RLTFYGPKKLKINMVPTTEADEFYEREVGVTLTPPAGKEKAEGWVGLQGVRELQIKYEES 460
Query: 575 DVNGIDIAAAGLGWFS---LGL---------------KGEASLTLWTYDGIEITLREPLV 616
D DIA +GLGW + LG+ GE L + +EI +R PL
Sbjct: 461 DRPACDIAISGLGWVAVEPLGVPSSNPDESAEEEDNESGELHLRVHVPKPVEIFVRPPLP 520
Query: 617 LDRA 620
+ +A
Sbjct: 521 VGKA 524
>gi|222622006|gb|EEE56138.1| hypothetical protein OsJ_05018 [Oryza sativa Japonica Group]
Length = 427
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 199/430 (46%), Gaps = 64/430 (14%)
Query: 228 KAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSG 287
+ E+KK+ + + +C RC L ++G + V + V A +L
Sbjct: 2 RCEQKKRHHQLR-----TVLCGRC-KLLSHGHMITAVGGHGGYPGGKQFVSADQLRDKLS 55
Query: 288 --NANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLL 345
+++ +VD VDF+G F L +D A + ++LV TKVDLL
Sbjct: 56 YLRHEKALIIKLVDIVDFNGSF-----------LARVRDFAGANP----IILVITKVDLL 100
Query: 346 PSQVSPTRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWV 403
P + WV +A KLN V+L S++ +GV +++ I++ R +V++
Sbjct: 101 PRDTDLNCIGDWV---VEAVVKKKLNVLSVHLTSSKSLVGVTGVISEIQQEKKGR-DVYI 156
Query: 404 IGAQNAGKSTLIN----TFAKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLY 455
+G+ N GKS I+ T A K+ V + K ++ +PGTTLG ++I L KLY
Sbjct: 157 LGSANVGKSAFISAMLRTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFL-GGGKLY 215
Query: 456 DTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVK------GGQAVHVGGLMRLDLDQ 509
DTPG+ H + ++ D+ + + L+ R + G ++ GGL+R+D+ +
Sbjct: 216 DTPGVHLHHRQAAVIHADDLPSLAPQSRLRARCFPANDTDVGLSGNSLFWGGLVRIDVVK 275
Query: 510 ASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-LGTWKDRKLK 568
A T +T + + +++ ADE ++ VG+ L PP G+++A +G R+L+
Sbjct: 276 ALPRT-RLTFYGPKKLKINMVPTTEADEFYEREVGVTLTPPAGKEKAEGWVGLQGVRELQ 334
Query: 569 VSGTSWDVNGIDIAAAGLGWFS---LGL---------------KGEASLTLWTYDGIEIT 610
+ D DIA +GLGW + LG+ GE L + +EI
Sbjct: 335 IKYEESDRPACDIAISGLGWVAVEPLGVPSSNPDESAEEEDNESGELHLRVHVPKPVEIF 394
Query: 611 LREPLVLDRA 620
+R PL + +A
Sbjct: 395 VRPPLPVGKA 404
>gi|302140656|gb|ADK95138.1| nitric oxide-associated protein 1 [Nicotiana attenuata]
Length = 548
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 198/434 (45%), Gaps = 72/434 (16%)
Query: 232 KKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNAN- 290
KKK + +K +C RC L ++G + V N V A L + +
Sbjct: 126 KKKHHQLRK-----VLCGRCR-LLSHGHMITAVGGNGGYSGGKQFVTAEELREKLSHLRN 179
Query: 291 -AGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQV 349
++V +VD VDF+G F L +D A + ++LV TKVDLLP +
Sbjct: 180 EKALIVKLVDIVDFNGSF-----------LARVRDLAGANP----IILVITKVDLLPKET 224
Query: 350 SPTRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQ 407
+ WV +A KLN V+L S++ +G+ +++ I++ R +V+++G+
Sbjct: 225 DLNCVGDWV---VEATMKKKLNVLSVHLTSSKSLVGIAGVVSEIQKEKKGR-DVYILGSA 280
Query: 408 NAGKST----LINTFAKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPG 459
N GKS L+NT + + + + K ++ +PGTTLG + L K+YDTPG
Sbjct: 281 NVGKSAFINALLNTMSYNDPIAATARKYKPIQSAVPGTTLGPIPXDAFL-GGGKVYDTPG 339
Query: 460 LLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKG-----------------GQAVHVGGL 502
+ H + ++ ++ + + L+ + + G G ++ GGL
Sbjct: 340 VHLHHRQAAVIHAEDLPTLAPQSRLRGQAFPSSGLNLESQIADRVRSSGLSGLSIFWGGL 399
Query: 503 MRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-LGT 561
+R+D+ + ET +T + + LH+ E ADE ++ +GI L PP G+++A +G
Sbjct: 400 VRIDVLKVLPETC-LTFYGPKALQLHMVPTEEADEFYQKELGILLTPPTGKEKADGWMGL 458
Query: 562 WKDRKLKVSGTSWDVNGIDIAAAGLGWFSL---------------GLKGEASLTLWTYDG 606
R+L++ + D+A +GLGWFS+ GE + +
Sbjct: 459 ETKRQLQIKYEDIERPTCDVAISGLGWFSVIPVNKSVGTSDPVSEVTAGELTFVVHVPKP 518
Query: 607 IEITLREPLVLDRA 620
+EI +R PL + +A
Sbjct: 519 VEIFVRPPLPVGKA 532
>gi|125537706|gb|EAY84101.1| hypothetical protein OsI_05484 [Oryza sativa Indica Group]
Length = 547
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 176/364 (48%), Gaps = 56/364 (15%)
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+++ +VD VDF+G F L +D A + ++LV TKVDLLP
Sbjct: 182 ALIIKLVDIVDFNGSF-----------LARVRDFAGANP----IILVITKVDLLPRDTDL 226
Query: 352 TRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNA 409
+ WV +A KLN V+L S++ +GV +++ I++ R +V+++G+ N
Sbjct: 227 NCIGDWV---VEAVVKKKLNVLSVHLTSSKSLVGVTGVISEIQQEKKGR-DVYILGSANV 282
Query: 410 GKSTLIN----TFAKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLL 461
GKS I+ T A K+ V + K ++ +PGTTLG ++I L KLYDTPG+
Sbjct: 283 GKSAFISAMLRTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFL-GGGKLYDTPGVH 341
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTYRVK------GGQAVHVGGLMRLDLDQASVETI 515
H + ++ D+ + + L+ R + G ++ GGL+R+D+ +A T
Sbjct: 342 LHHRQAAVIHADDLPSLAPQSRLRARCFPANDTDVGLSGNSLFWGGLVRIDVVKALPRT- 400
Query: 516 YVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-LGTWKDRKLKVSGTSW 574
+T + + +++ ADE ++ VG+ L PP G+++A +G R+L++
Sbjct: 401 RLTFYGPKKLKINMVPTTEADEFYEREVGVTLTPPAGKEKAEGWVGLQVVRELQIKYEES 460
Query: 575 DVNGIDIAAAGLGWFS---LGL---------------KGEASLTLWTYDGIEITLREPLV 616
D DIA +GLGW + LG+ GE L + +EI +R PL
Sbjct: 461 DRPACDIAISGLGWVAVEPLGVPSSNPDESAEEEDNESGELHLRVHVPKPVEIFVRPPLP 520
Query: 617 LDRA 620
+ +A
Sbjct: 521 VGKA 524
>gi|309775711|ref|ZP_07670709.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
3_1_53]
gi|308916550|gb|EFP62292.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
3_1_53]
Length = 359
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 167/385 (43%), Gaps = 60/385 (15%)
Query: 242 KGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCV 301
K E C RC +R+Y V + + + D ++ NA +VV VVD
Sbjct: 25 KMEADYCQRCFRIRHYDDVVISMKQGIDSDAVLRKI----------NAMDALVVWVVDLF 74
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DF+ + L K +++V TK DLLP+ + +L ++ R
Sbjct: 75 DFESNLLPGINRHLLGK---------------DILMVATKRDLLPATLGNDKLSAFMLRR 119
Query: 362 AKAGGAPKLNGVYLV-----SARKDLG-----VRNLLAFIKELAGPRGNVWVIGAQNAGK 411
K G + G+ + AR++ VR+ +A + +V V+G NAGK
Sbjct: 120 LKEEGIV-VQGIVVCGDLAAHARREENASVDEVRSAIAHYRR----ERDVVVMGMANAGK 174
Query: 412 STLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
STL+N + LT + PGTTL I +LYDTPGL + ++
Sbjct: 175 STLLNAICDH-----TDLTTSRHPGTTLDF---NSIAMEGYQLYDTPGLTRMDSLLTHVD 226
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
K V K L+ R Y++KG Q + +GGL+RLDL E++ + S + LH K
Sbjct: 227 ERLLKTVIPLKPLKARGYQLKGNQTLSLGGLVRLDL--IGCESVSCVAYFSERLKLHRSK 284
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
E AD++W+ H L P IG+ KD K K S +D+ GLGWF +
Sbjct: 285 QEKADDLWRQHYDEILSPVIGEQ--------KDMK-KFSYGHVQEYKVDVVIHGLGWFCI 335
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
+ L ++ + +T R+ ++
Sbjct: 336 SGHVQ-ELHVYVAEQGSVTFRKAMI 359
>gi|357450949|ref|XP_003595751.1| Nitric oxide synthase [Medicago truncatula]
gi|355484799|gb|AES66002.1| Nitric oxide synthase [Medicago truncatula]
Length = 547
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 189/422 (44%), Gaps = 67/422 (15%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNAN--AGVVVMVVDCV 301
+ +C RC L ++G++ V + + A L + + ++V +VD V
Sbjct: 125 KTVLCGRCQ-LLSHGEMITAVGGHGGYSGGKQFITAEDLRQKLSHLRDAKALIVKLVDVV 183
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DF+G F L +D A + +++V TKVDLLP + WV
Sbjct: 184 DFNGSF-----------LSRVRDLAGANP----IIMVVTKVDLLPRDTDFNCVGDWV--- 225
Query: 362 AKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
+A KLN V+L S++ +G+ +++ I++ R +V+++G+ N GKS IN
Sbjct: 226 VEAITRKKLNVLSVHLTSSKSLVGITGVISEIQKEKKGR-DVYILGSANVGKSAFINALL 284
Query: 420 KK--------EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
K + K ++ +PGTTLG ++I KLYDTPG+ H + +
Sbjct: 285 KTMSYNDPVAAAAQRYKPVQSAVPGTTLGPIQINAFF-GGGKLYDTPGVHLHHRQTAVVP 343
Query: 472 RDEQKMVEIRKELQPRTY---------------RVKG--GQAVHVGGLMRLDLDQASVET 514
++ + + L+ ++ V G G ++ GGL+R+D+ +A ET
Sbjct: 344 SEDLSSLAPKSRLRGLSFPSSQVLSDNTNKGASTVNGLNGFSIFWGGLVRIDVLKALPET 403
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASEL-GTWKDRKLKVSGTS 573
+T + + +H+ E ADE ++ +G+ L PP G+++A G +RKL++
Sbjct: 404 C-LTFYGPKRMPIHMVPTEKADEFYQKELGVLLTPPSGREKAEHWRGLDSERKLQIKFED 462
Query: 574 WDVNGIDIAAAGLGWFS---------------LGLKGEASLTLWTYDGIEITLREPLVLD 618
+ DIA +GLGW S + GE L + +EI R PL +
Sbjct: 463 AERPACDIAISGLGWLSVEPVGRSHRFSQQNAIDTTGELLLAVHVPKPVEIFTRPPLPVG 522
Query: 619 RA 620
+A
Sbjct: 523 KA 524
>gi|346314270|ref|ZP_08855791.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
2_2_44A]
gi|345906628|gb|EGX76352.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
2_2_44A]
Length = 360
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 168/382 (43%), Gaps = 54/382 (14%)
Query: 242 KGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCV 301
K E C RC +R+Y V + + + D ++ NA +VV VVD
Sbjct: 26 KMEADYCQRCFRIRHYDDVVISMKQGIDSDAVLQKI----------NAMDALVVWVVDLF 75
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DF+ + L K +++V TK DLLP+ + +L +++ R
Sbjct: 76 DFESNLLPGINRHLLGK---------------DILMVATKRDLLPATLGNEKLSQFLLRR 120
Query: 362 AKAGG----APKLNGVYLVSARKD--LGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLI 415
K G + G AR++ V + A I R +V V+G NAGKSTL+
Sbjct: 121 LKEEGILVQGIVVCGDLAAHARREDNASVDEVCAAIAHYRKER-DVVVMGMANAGKSTLL 179
Query: 416 NTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQ 475
N +GV LT + PGTTL I +LYDTPGL + ++
Sbjct: 180 NAIC--DGVD---LTTSRHPGTTLDF---NSIAMEGYQLYDTPGLTRMDSLLTHVDDGLL 231
Query: 476 KMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENA 535
K V K L+ R Y++KG Q + +GGL+RLDL + E + + S + LH K E A
Sbjct: 232 KTVIPLKPLKARGYQLKGNQTLSLGGLVRLDLIRC--EQVSCVAYFSERLPLHRSKQEKA 289
Query: 536 DEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKG 595
D +W H L P IG+ ++ K S + +D+ GLGWF ++G
Sbjct: 290 DVLWAQHYDEILSPVIGE---------REHMKKFSYGHVQEHKLDVVIHGLGWFC--IRG 338
Query: 596 E-ASLTLWTYDGIEITLREPLV 616
+ AS+ ++ +T R+ ++
Sbjct: 339 DVASVDVYVAQQGNVTFRKAMI 360
>gi|449488606|ref|XP_004158109.1| PREDICTED: NO-associated protein 1,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 555
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 194/430 (45%), Gaps = 66/430 (15%)
Query: 230 ERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGN- 288
E KKK + ++ +C RC L ++G + V N + A L +
Sbjct: 130 ELKKKHHQLRR-----VICGRCR-LLSHGHMITAVGGNGGYSGGKQFISAEELRDKLSHL 183
Query: 289 -ANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPS 347
++V +VD VDF+G F L +D A + ++LV TKVDLLP
Sbjct: 184 RYEKALIVKLVDIVDFNGSF-----------LARVRDLAGANP----IILVVTKVDLLPK 228
Query: 348 QVSPTRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIG 405
+ WV +A KL+ V+L S++ +GV ++A I++ R +V+++G
Sbjct: 229 GTDLNCIGDWV---VEATTKKKLSVLSVHLTSSKSLVGVAGVVADIQKEKKGR-DVYILG 284
Query: 406 AQNAGKSTLINTFAKK--------EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
+ N GKS IN KK + + ++ +PGTTLG ++I L KLYDT
Sbjct: 285 SANVGKSAFINAVLKKMAERDPVAAAAQKYRPIQSAVPGTTLGPIQIDAFL-GGGKLYDT 343
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVK------------GGQAVHVGGLMRL 505
PG+ H ++ ++ ++ + + L+ + ++V+ G ++ GGL+R+
Sbjct: 344 PGVHLHHRLAAVVHSEDLPALAPQSRLRGQHFQVQHLPMNNELSSGLNGFSIFWGGLVRV 403
Query: 506 DLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIG-QDRASELGTWKD 564
DL + ET +T + + + + E ADE ++ +GI L PP G Q R G
Sbjct: 404 DLLKVQPETC-LTFYGPKGLQIRVVPTEKADEFYEKELGISLTPPSGKQTRNDWRGLETV 462
Query: 565 RKLKVSGTSWDVNGIDIAAAGLGWFSLGLK--------------GEASLTLWTYDGIEIT 610
R+LK++ D+A +GLGW ++ K E L + +EI
Sbjct: 463 RQLKINFEDEQRPACDVAISGLGWITVEQKKSLSNNHSDLESSDDELELAVHVPKPVEIF 522
Query: 611 LREPLVLDRA 620
+R P+ + +A
Sbjct: 523 VRPPMPVGKA 532
>gi|449451815|ref|XP_004143656.1| PREDICTED: NO-associated protein 1,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 555
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 194/430 (45%), Gaps = 66/430 (15%)
Query: 230 ERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGN- 288
E KKK + ++ +C RC L ++G + V N + A L +
Sbjct: 130 ELKKKHHQLRR-----VICGRCR-LLSHGHMITAVGGNGGYSGGKQFISAEELRDKLSHL 183
Query: 289 -ANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPS 347
++V +VD VDF+G F L +D A + ++LV TKVDLLP
Sbjct: 184 RYEKALIVKLVDIVDFNGSF-----------LARVRDLAGANP----IILVVTKVDLLPK 228
Query: 348 QVSPTRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIG 405
+ WV +A KL+ V+L S++ +GV ++A I++ R +V+++G
Sbjct: 229 GTDLNCIGDWV---VEATTRKKLSVLSVHLTSSKSLVGVAGVVADIQKEKKGR-DVYILG 284
Query: 406 AQNAGKSTLINTFAKK--------EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
+ N GKS IN KK + + ++ +PGTTLG ++I L KLYDT
Sbjct: 285 SANVGKSAFINAVLKKMAERDPVAAAAQKYRPIQSAVPGTTLGPIQIDAFL-GGGKLYDT 343
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVK------------GGQAVHVGGLMRL 505
PG+ H ++ ++ ++ + + L+ + ++V+ G ++ GGL+R+
Sbjct: 344 PGVHLHHRLAAVVHSEDLPALAPQSRLRGQHFQVQHLPMDNELSSGLNGFSIFWGGLVRV 403
Query: 506 DLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIG-QDRASELGTWKD 564
DL + ET +T + + + + E ADE ++ +GI L PP G Q R G
Sbjct: 404 DLLKVQPETC-LTFYGPKGLQIRVVPTEKADEFYEKELGISLTPPSGKQTRNDWRGLETV 462
Query: 565 RKLKVSGTSWDVNGIDIAAAGLGWFSLGLK--------------GEASLTLWTYDGIEIT 610
R+LK++ D+A +GLGW ++ K E L + +EI
Sbjct: 463 RQLKINFEDEQRPACDVAISGLGWITVEQKKSLSNNHSDLESSVDELELAVHVPKPVEIF 522
Query: 611 LREPLVLDRA 620
+R P+ + +A
Sbjct: 523 VRPPMPVGKA 532
>gi|301015573|gb|ADK47527.1| NOA1/RIF1 protein [Medicago truncatula]
Length = 547
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 188/422 (44%), Gaps = 67/422 (15%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNAN--AGVVVMVVDCV 301
+ +C RC L ++G++ V + + A L + + ++V +VD V
Sbjct: 125 KTVLCGRCQ-LLSHGEMITAVGGHGGYSGGKQFITAEDLRQKLSHLRDAKALIVKLVDVV 183
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DF+G F L +D A + +++V TKVDLLP + WV
Sbjct: 184 DFNGSF-----------LSRVRDLAGANP----IIMVVTKVDLLPRDTDFNCVGDWV--- 225
Query: 362 AKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
+A KLN V+L S++ +G+ +++ I++ R +V+++G+ N GKS IN
Sbjct: 226 VEAITRKKLNVLSVHLTSSKSLVGITGVISEIQKEKKGR-DVYILGSANVGKSAFINALL 284
Query: 420 KK--------EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
K + K ++ +PGTTLG ++I KLYDTPG+ H + +
Sbjct: 285 KTMSYNDPVAAAAQRYKPVQSAVPGTTLGPIQINAFF-GGGKLYDTPGVHLHHRQTAVVP 343
Query: 472 RDEQKMVEIRKELQPRTY---------------RVKG--GQAVHVGGLMRLDLDQASVET 514
++ + + L+ ++ V G G ++ GGL+R+D+ +A ET
Sbjct: 344 SEDLSSLAPKSRLRGLSFPSSQVLSDNTNKGASTVNGLNGFSIFWGGLVRIDVLKALPET 403
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASEL-GTWKDRKLKVSGTS 573
+T + + +H+ E ADE ++ +G+ L PP G+++A G RKL++
Sbjct: 404 C-LTFYGPKRMPIHMVPTEKADEFYQKELGVLLTPPSGREKAEHWRGLDSKRKLQIKFED 462
Query: 574 WDVNGIDIAAAGLGWFS---------------LGLKGEASLTLWTYDGIEITLREPLVLD 618
+ DIA +GLGW S + GE L + +EI R PL +
Sbjct: 463 AERPACDIAISGLGWLSVEPVGRSHRFSQQNAIDTTGELLLAVHVPKPVEIFTRPPLPVG 522
Query: 619 RA 620
+A
Sbjct: 523 KA 524
>gi|313901194|ref|ZP_07834682.1| ribosome biogenesis GTPase YqeH [Clostridium sp. HGF2]
gi|373121441|ref|ZP_09535309.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
21_3]
gi|422327456|ref|ZP_16408483.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
6_1_45]
gi|312954152|gb|EFR35832.1| ribosome biogenesis GTPase YqeH [Clostridium sp. HGF2]
gi|371663296|gb|EHO28486.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
6_1_45]
gi|371665459|gb|EHO30624.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
21_3]
Length = 360
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 167/382 (43%), Gaps = 54/382 (14%)
Query: 242 KGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCV 301
K E C RC +R+Y V + + + D ++ NA +VV VVD
Sbjct: 26 KMEADYCQRCFRIRHYDDVVISMKQGIDSDAVLQKI----------NAMDALVVWVVDLF 75
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DF+ + L K +++V TK DLLP+ + +L +++ R
Sbjct: 76 DFESNLLPGINRHLLGK---------------DILMVATKRDLLPATLGNEKLSQFLLRR 120
Query: 362 AKAGG----APKLNGVYLVSARKD--LGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLI 415
K G + G AR++ V + A I R +V V+G NAGKSTL+
Sbjct: 121 LKEEGILVQGIVVCGDLAAHARREDNASVDEVCAAIAHYRKGR-DVVVMGMANAGKSTLL 179
Query: 416 NTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQ 475
N +GV LT + PGTTL I +LYDTPGL + ++
Sbjct: 180 NAIC--DGVD---LTTSRHPGTTLDF---NSIAMEGYQLYDTPGLTRMDSLLTHVDDGLL 231
Query: 476 KMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENA 535
K V K L+ R Y++KG Q + +GGL+RLDL E + + S + LH K E A
Sbjct: 232 KTVIPLKPLKARGYQLKGNQTLSLGGLVRLDL--IGCEQVSCVAYFSERLPLHRSKQEKA 289
Query: 536 DEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKG 595
D +W H L P IG+ ++ K S + +D+ GLGWF ++G
Sbjct: 290 DVLWAQHYDEILTPVIGE---------REHMKKFSYGHVQEHKLDVVIHGLGWFC--IRG 338
Query: 596 E-ASLTLWTYDGIEITLREPLV 616
+ AS+ ++ +T R+ ++
Sbjct: 339 DVASVDVYVAQQGNVTFRKAMI 360
>gi|419759618|ref|ZP_14285909.1| GTP-binding protein [Thermosipho africanus H17ap60334]
gi|407515351|gb|EKF50117.1| GTP-binding protein [Thermosipho africanus H17ap60334]
Length = 358
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 162/370 (43%), Gaps = 50/370 (13%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC+ + +YG++ V E + D+VI N V+ V+D DF+G
Sbjct: 33 LCQRCYRIIHYGKLTVPVQEEIFLH-QIDKVIK----------NFEKVLYVIDITDFEGT 81
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
+ + L + KD + TK DLLP +S W++ R A
Sbjct: 82 YRSEIMEKL-----QGKD----------VYFAITKFDLLPRSLSSIEAQEWLKKRLNATS 126
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
++L S++ G++ L F K+ + ++ ++G N GKS+L++ F K+
Sbjct: 127 ----EKIFLTSSKNGFGLKKLEKFFKD---SKKDILIVGVTNVGKSSLLSAFTKEHP--- 176
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
T +P PGTTLGI++ +YDTPG+L + L+ + Q + L
Sbjct: 177 ---TISPFPGTTLGIVKRKVF---NTYIYDTPGILTNDRVIDLLSPECQAKILKTNNLTR 230
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
+T+++ +A+ V +++++ + ++A V+ H K E AD++ G
Sbjct: 231 KTFKIDQSRAILVSAFCKIEVEFDGDKKPIFQIFAPEKVTFHETKSERADQLIHQRAGDL 290
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
LQPP + S+ +R L +NG+ G F A +T+ +
Sbjct: 291 LQPPCKKTDMSKYNFKTERILVDQKQEISINGLCFINIKRGPFV------AKITVP--EN 342
Query: 607 IEITLREPLV 616
I +TLR+ L+
Sbjct: 343 INVTLRDRLL 352
>gi|356531613|ref|XP_003534371.1| PREDICTED: nitric oxide synthase 1-like [Glycine max]
Length = 554
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 173/373 (46%), Gaps = 65/373 (17%)
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
++V +VD VDF+G F L +D A + +VLV TKVDLLP
Sbjct: 180 ALIVKLVDIVDFNGSF-----------LSRVRDLAGSNP----IVLVVTKVDLLPRDTDL 224
Query: 352 TRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNA 409
+ WV +A KLN V+L S++ +G+ +++ I++ R +V+++G+ N
Sbjct: 225 NCVGDWV---VEATMRKKLNVLSVHLTSSKSLVGITGVISEIQKEKKGR-DVYILGSANV 280
Query: 410 GKSTLIN----TFAKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLL 461
GKS IN T A + V S K ++ +PGTTLG ++I L KLYDTPG+
Sbjct: 281 GKSAFINALLKTMAINDPVAASAQRYKPIQSAVPGTTLGPIQINAFL-GGGKLYDTPGVH 339
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTY--------RVKGGQAVHV----------GGLM 503
H + ++ ++ ++ + L+ + V+ G + V GGL+
Sbjct: 340 LFHRQTAVVHSEDLPILAPQSRLRGLAFPSSIVSSDNVEEGASTIVNGLNEFSIFWGGLV 399
Query: 504 RLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASEL-GTW 562
R+D+ + ET +T + + +H+ E A E ++ +G L PP G + A G
Sbjct: 400 RIDVLKVLPETC-LTFYGPKRIPIHMVPTEQAVEFYQTELGFLLTPPSGGENAENWKGLE 458
Query: 563 KDRKLKVSGTSWDVNGIDIAAAGLGWFS---------------LGLKGEASLTLWTYDGI 607
+RKL++ D DIA +GLGWF+ + GE L + +
Sbjct: 459 SERKLQIKFEVVDRPACDIAISGLGWFTVEPVSRSHKISQPKPVETAGELILAVHVPKAV 518
Query: 608 EITLREPLVLDRA 620
EI +R P+ + +A
Sbjct: 519 EIFVRPPIPVSKA 531
>gi|295695837|ref|YP_003589075.1| ribosome biogenesis GTPase YqeH [Kyrpidia tusciae DSM 2912]
gi|295411439|gb|ADG05931.1| ribosome biogenesis GTPase YqeH [Kyrpidia tusciae DSM 2912]
Length = 363
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 170/376 (45%), Gaps = 49/376 (13%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
+C RC+ + +Y E+A +P V+A +VV VVD +D+ G
Sbjct: 32 VLCRRCYRIIHY----QEIAPAAVPPERLRGVLA------RAKQERALVVQVVDILDWTG 81
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
++ + D A + LV K+DLLP + + R+ RW + +
Sbjct: 82 -----------TRIPDLNDVAG-----ERQWLVVHKIDLLPRETNYDRVRRWFERQLRRE 125
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G + VYL SA K +G+ LLA + + G V+ +GA N GKS+L+N +
Sbjct: 126 GF-RAQRVYLASAHKGIGIPGLLADLNRVDG---AVYFMGAANTGKSSLLNALMGAAEIS 181
Query: 426 VSK-LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKEL 484
+ LT + +PGTTL + I K DTPG+ + + RL + V + +
Sbjct: 182 SDRPLTTSRVPGTTLNAVTID--RGEGRKWVDTPGITAGYRVVDRLCPTCLRAVVPVQPI 239
Query: 485 QPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+PR Y ++ GQ++ +GGL RLD+ + + + S V +H + A ++ H G
Sbjct: 240 RPRVYSLETGQSIWLGGLARLDVLEGDRQPF--VCFLSNRVPIHRTNVLRAQPFFEKHAG 297
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNG---IDIAAAGLGWFSLGLKGE-ASLT 600
L PP + A + ++ T W + +D+A AGLGW S +G A +
Sbjct: 298 KDLVPPCERCLAG--------VMTMARTEWKLEAGEKVDLAVAGLGWVS--ARGRVARVG 347
Query: 601 LWTYDGIEITLREPLV 616
L +G+E LR LV
Sbjct: 348 LSVPEGVETELRPALV 363
>gi|293331105|ref|NP_001168044.1| uncharacterized protein LOC100381773 [Zea mays]
gi|223945667|gb|ACN26917.1| unknown [Zea mays]
Length = 540
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 173/359 (48%), Gaps = 51/359 (14%)
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
++V +VD VDF+G F L +D A + ++LV TKVDLLP
Sbjct: 180 ALIVKLVDIVDFNGSF-----------LARVRDFAGANP----IILVITKVDLLPRDTDL 224
Query: 352 TRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNA 409
+ WV ++ KLN V+L S++ +G+ +++ I + R +V+++G+ N
Sbjct: 225 NCIGDWV---VESVVKKKLNVLSVHLTSSKSLVGITGVISEIHQERKGR-DVYILGSANV 280
Query: 410 GKSTLIN----TFAKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLL 461
GKS I+ T A K+ V + K ++ +PGTTLG ++I L KLYDTPG+
Sbjct: 281 GKSAFISAMLRTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFL-GGGKLYDTPGVH 339
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTYRVK------GGQAVHVGGLMRLDLDQASVETI 515
H + ++ D+ + + L+ R + G ++ GL+R+D+ +A +
Sbjct: 340 LHHRQAAVIHADDLPSLAPQSRLKGRCFPANDTDVELSGNSLFWAGLVRIDVIKALPRS- 398
Query: 516 YVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-LGTWKDRKLKVSGTSW 574
+T + + +++ AD+ ++ VG+ L PP G++RA G R+LK+
Sbjct: 399 RLTFYGPKKLKINMVPTTEADQFYETEVGVTLTPPTGKERAEGWTGLQGVRELKIKYEER 458
Query: 575 DVNGIDIAAAGLGWFSLGLKGEASLTL-WTYDG------------IEITLREPLVLDRA 620
D DIA +GLGW S+ G S + YDG +E+ +R PL + +A
Sbjct: 459 DRPACDIAISGLGWISVEPSGVPSNSAEEVYDGGELHLVVHVPKPVEVFMRPPLPVGKA 517
>gi|242060118|ref|XP_002451348.1| hypothetical protein SORBIDRAFT_04g000530 [Sorghum bicolor]
gi|241931179|gb|EES04324.1| hypothetical protein SORBIDRAFT_04g000530 [Sorghum bicolor]
Length = 546
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 190/411 (46%), Gaps = 58/411 (14%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSG--NANAGVVVMVVDCVDF 303
+C RC L ++G + V + V A +L + ++V +VD VDF
Sbjct: 135 VLCGRC-KLLSHGHMVTAVGGHGGYPGGKQFVSAEQLREKLSYLRHEKALIVKLVDIVDF 193
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F L +D A + ++LV TKVDLLP + WV +
Sbjct: 194 NGSF-----------LARVRDFAGANP----IILVITKVDLLPRDTDLNCIGDWV---VE 235
Query: 364 AGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN----T 417
+ KLN V+L S++ +G+ +++ I++ R +V+++G+ N GKS I+ T
Sbjct: 236 SVVKKKLNVLSVHLTSSKSLVGITGVISEIQQEKKGR-DVYILGSANVGKSAFISAMLRT 294
Query: 418 FAKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
A K+ V + K ++ +PGTTLG ++I L KLYDTPG+ H + ++ D
Sbjct: 295 MAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFL-GGGKLYDTPGVHLHHRQAAVIHAD 353
Query: 474 EQKMVEIRKELQPRTYRVK------GGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSL 527
+ + + L+ R + G ++ GL+R+D+ +A + +T + + +
Sbjct: 354 DLPSLAPQSRLKGRCFPANDTDVELSGNSLFWAGLVRIDVVKA-LPRARLTFYGPKKLKI 412
Query: 528 HLGKIENADEIWKNHVGIRLQPPIGQDRASEL-GTWKDRKLKVSGTSWDVNGIDIAAAGL 586
++ AD+ ++ VG+ L PP G++RA G R+LK+ D DIA +GL
Sbjct: 413 NMVPTTEADQFYETEVGVTLTPPTGKERAEGWQGLQGVRELKIKYEERDRPACDIAISGL 472
Query: 587 GWFSL---GLK--------------GEASLTLWTYDGIEITLREPLVLDRA 620
GW S+ G+ GE L + +E+ +R PL + +A
Sbjct: 473 GWISVEPSGVPSNSSDDNVEEEYDGGELHLVVHVPKPVEVFVRPPLPVGKA 523
>gi|217077039|ref|YP_002334755.1| GTP-binding protein [Thermosipho africanus TCF52B]
gi|217036892|gb|ACJ75414.1| GTP-binding protein [Thermosipho africanus TCF52B]
Length = 358
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 161/370 (43%), Gaps = 50/370 (13%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC+ + +YG++ V E + D+VI N V+ V+D DF+G
Sbjct: 33 LCQRCYRIIHYGKLTVPVQEEIFLH-QIDKVIK----------NFEKVLYVIDITDFEGT 81
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
+ + L + KD + TK DLLP +S W++ R
Sbjct: 82 YRSEIMEKL-----QGKD----------VYFAITKFDLLPRSLSSIEAQEWLKKRLNTTS 126
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV 426
++L S++ G++ L F K+ + ++ ++G N GKS+L++ F K+
Sbjct: 127 ----EKIFLTSSKNGFGLKKLEKFFKD---SKKDILIVGVTNVGKSSLLSAFTKEHP--- 176
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
T +P PGTTLGI++ +YDTPG+L + L+ + Q + L
Sbjct: 177 ---TISPFPGTTLGIVKRKVF---NTYIYDTPGILTNDRVIDLLSPECQAKILKTNNLTR 230
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR 546
+T+++ +A+ V +++++ + ++A V+ H K E AD++ G
Sbjct: 231 KTFKIDQSRAILVSAFCKIEVEFDGDKKPIFQIFAPEKVTFHETKSERADQLIHQRAGDL 290
Query: 547 LQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
LQPP + S+ +R L +NG+ G F A +T+ +
Sbjct: 291 LQPPCKKTDMSKYNFKTERILVDQKQEISINGLCFINIKRGPFV------AKITVP--EN 342
Query: 607 IEITLREPLV 616
I +TLR+ L+
Sbjct: 343 INVTLRDRLL 352
>gi|237831793|ref|XP_002365194.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211962858|gb|EEA98053.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
Length = 1036
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 180/411 (43%), Gaps = 57/411 (13%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKN--EVAEN----LIPDFDFDRVIAT--RLMKPSGNANA 291
+++ + +C RC+ ++ Y Q+ E A N L+P + V+ + + MK
Sbjct: 431 RKRTRLLLCRRCYRIQMYKQLDGDWEAAANAQDQLLPSLSPEAVVQSIVKTMK-----KD 485
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
VV+ +VD D + LF+ A SK+L + L+ +VD LP
Sbjct: 486 SVVLKIVDVCDLESS----VVPELFQ--------ACRSKRLHVIWLI-NRVDCLPRTAQK 532
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGV--RNLLAFIKELAGPRG-------NVW 402
+ WVR + ++ LVS+ G + + P G ++
Sbjct: 533 REVKEWVRRMVRQIDNVHIDDCILVSSATGHGFDELERRLELLLVPTPGGVCTVEGRRIY 592
Query: 403 VIGAQNAGKSTLINTF-----AKKEGVKVSK-----LTEAPIPGTTLGILRIGGILPAKA 452
V+G NAGKST + F K G K +T + +PGTTL L G LP
Sbjct: 593 VVGRVNAGKSTFVTRFLKFINYKHAGTIFMKRASGGVTRSALPGTTLSFLPFG--LPQGF 650
Query: 453 KLYDTPGLLHPHLMS--MRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQA 510
KL DTPG+ H ++ + D +V K LQP TY + G+++ +G L R+DL Q
Sbjct: 651 KLIDTPGIPSRHQITSLLPFAADLYSIVP-SKRLQPITYAITEGKSLLIGALARIDLVQG 709
Query: 511 SVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKV- 569
S T +T + S ++LH+ K A ++ L PP +L +KV
Sbjct: 710 S--TALITCFFSHKITLHICKTVKAADLLSRKACTFLYPPHLPAGFDKLQPLVRHSVKVH 767
Query: 570 SGTSWDVNGIDIAAAGLGWFSL-GLKGEASLTLWTYDGIEITLREPLVLDR 619
+G S + DI+ AGLGW S+ G G L +W G+++ R P +L R
Sbjct: 768 AGNSLAYD--DISIAGLGWISVAGSAGPKELHVWVPQGVKV-FRRPAMLPR 815
>gi|221506643|gb|EEE32260.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 1037
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 180/411 (43%), Gaps = 57/411 (13%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKN--EVAEN----LIPDFDFDRVIAT--RLMKPSGNANA 291
+++ + +C RC+ ++ Y Q+ E A N L+P + V+ + + MK
Sbjct: 432 RKRTRLLLCRRCYRIQMYKQLDGDWEAAANAQDQLLPSLSPEAVVQSIVKTMK-----KD 486
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
VV+ +VD D + LF+ A SK+L + L+ +VD LP
Sbjct: 487 SVVLKIVDVCDLESS----VVPELFQ--------ACRSKRLHVIWLI-NRVDCLPRTAQK 533
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGV--RNLLAFIKELAGPRG-------NVW 402
+ WVR + ++ LVS+ G + + P G ++
Sbjct: 534 REVKEWVRRMVRQIDNVHIDDCILVSSATGHGFDELERRLELLLVPTPGGVCTVEGRRIY 593
Query: 403 VIGAQNAGKSTLINTF-----AKKEGVKVSK-----LTEAPIPGTTLGILRIGGILPAKA 452
V+G NAGKST + F K G K +T + +PGTTL L G LP
Sbjct: 594 VVGRVNAGKSTFVTRFLKFINYKHAGTIFMKRASGGVTRSALPGTTLSFLPFG--LPQGF 651
Query: 453 KLYDTPGLLHPHLMS--MRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQA 510
KL DTPG+ H ++ + D +V K LQP TY + G+++ +G L R+DL Q
Sbjct: 652 KLIDTPGIPSRHQITSLLPFAADLYSIVP-SKRLQPITYAITEGKSLLIGALARIDLVQG 710
Query: 511 SVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKV- 569
S T +T + S ++LH+ K A ++ L PP +L +KV
Sbjct: 711 S--TALITCFFSHKITLHICKTVKAADLLSRKACTFLYPPHLPAGFDKLQPLVRHSVKVH 768
Query: 570 SGTSWDVNGIDIAAAGLGWFSL-GLKGEASLTLWTYDGIEITLREPLVLDR 619
+G S + DI+ AGLGW S+ G G L +W G+++ R P +L R
Sbjct: 769 AGNSLAYD--DISIAGLGWISVAGSAGPKELHVWVPQGVKV-FRRPAMLPR 816
>gi|221486959|gb|EEE25205.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 1036
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 180/411 (43%), Gaps = 57/411 (13%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKN--EVAEN----LIPDFDFDRVIAT--RLMKPSGNANA 291
+++ + +C RC+ ++ Y Q+ E A N L+P + V+ + + MK
Sbjct: 431 RKRTRLLLCRRCYRIQMYKQLDGDWEAAANAQDQLLPSLSPEAVVQSIVKTMK-----KD 485
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
VV+ +VD D + LF+ A SK+L + L+ +VD LP
Sbjct: 486 SVVLKIVDVCDLESS----VVPELFQ--------ACRSKRLHVIWLI-NRVDCLPRTAQK 532
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGV--RNLLAFIKELAGPRG-------NVW 402
+ WVR + ++ LVS+ G + + P G ++
Sbjct: 533 REVKEWVRRMVRQIDNVHIDDCILVSSATGHGFDELERRLELLLVPTPGGVCTVEGRRIY 592
Query: 403 VIGAQNAGKSTLINTF-----AKKEGVKVSK-----LTEAPIPGTTLGILRIGGILPAKA 452
V+G NAGKST + F K G K +T + +PGTTL L G LP
Sbjct: 593 VVGRVNAGKSTFVTRFLKFINYKHAGTIFMKRASGGVTRSALPGTTLSFLPFG--LPQGF 650
Query: 453 KLYDTPGLLHPHLMS--MRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQA 510
KL DTPG+ H ++ + D +V K LQP TY + G+++ +G L R+DL Q
Sbjct: 651 KLIDTPGIPSRHQITSLLPFAADLYSIVP-SKRLQPITYAITEGKSLLIGALARIDLVQG 709
Query: 511 SVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKV- 569
S T +T + S ++LH+ K A ++ L PP +L +KV
Sbjct: 710 S--TALITCFFSHKITLHICKTVKAADLLSRKACTFLYPPHLPAGFDKLQPLVRHSVKVH 767
Query: 570 SGTSWDVNGIDIAAAGLGWFSL-GLKGEASLTLWTYDGIEITLREPLVLDR 619
+G S + DI+ AGLGW S+ G G L +W G+++ R P +L R
Sbjct: 768 AGNSLAYD--DISIAGLGWISVAGSAGPKELHVWVPQGVKV-FRRPAMLPR 815
>gi|320528085|ref|ZP_08029250.1| ribosome biogenesis GTPase YqeH [Solobacterium moorei F0204]
gi|320131433|gb|EFW23998.1| ribosome biogenesis GTPase YqeH [Solobacterium moorei F0204]
Length = 349
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 165/379 (43%), Gaps = 57/379 (15%)
Query: 242 KGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCV 301
K + C RC L +Y + + + PD DR+ +++ V+D
Sbjct: 24 KADAEYCQRCFRLIHYDDLTISMKTGIDPDAVIDRIAKMD----------ALILWVIDLY 73
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DF+ + L K +V++ TK DLLP+ ++ +V R
Sbjct: 74 DFEAGIINGINRKLADK---------------DIVMIATKRDLLPASCGEEKIAHFVFGR 118
Query: 362 AKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK 421
K G ++ + L S + +GV + + ELA R + V+G N+GKSTLIN
Sbjct: 119 LKDLGI-RIERLILASKEEKMGVEEIKECVDELANGR-QIVVMGKANSGKSTLINNL--- 173
Query: 422 EGVKVSKLTEAPIPGTTLGI--LRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
+ LT + PGTTL L I G DTPG+ + M M ++ + K +
Sbjct: 174 --MSTRVLTASRYPGTTLDFNELEIDG-----HTYIDTPGIEIGNSMLMEVSEADLKTIM 226
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVW-ASPNVSLHLGKIENADEI 538
K ++P+ ++++G Q+ VGGL RLDL + VW S +++H ADE
Sbjct: 227 PSKNIKPQVFQLRGEQSFFVGGLARLDLSGCKHAS---CVWYLSDRLNVHRTNGNYADEK 283
Query: 539 WKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEAS 598
W HVG P + +E+ + RK D+ +D+ GLGW + GE S
Sbjct: 284 WNTHVGTLFVPTAIE---AEMKKYTIRK--------DMPKVDVVIDGLGWACVS--GEVS 330
Query: 599 -LTLWTYDGIEITLREPLV 616
+T+ + +T R+ ++
Sbjct: 331 TITVHVPKSVSVTFRKAML 349
>gi|261278032|gb|ACX61572.1| GTPase [Brassica juncea]
Length = 555
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 171/370 (46%), Gaps = 47/370 (12%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGN--ANAGVVVMVVDCVDFD 304
+C RC L ++G + V N V A L + + ++V +VD VDF+
Sbjct: 141 ICGRCQ-LLSHGHMITAVGGNGGYAGGKQFVSADELREKLSHLRHEKALIVKLVDIVDFN 199
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F R + L A ++LV TK+DLLP + WV +
Sbjct: 200 GSFLARV-----RDLVGAN----------PIILVITKIDLLPKGTDMNCIGDWV---VEV 241
Query: 365 GGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN----TF 418
KLN V+L S++ GV + + I++ R +V+++GA N GKS IN T
Sbjct: 242 TTKKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKGR-DVYILGAANVGKSAFINALLKTM 300
Query: 419 AKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
A+++ V + K ++ +PGTTLG ++I L + KLYDTPG+ H + ++ D+
Sbjct: 301 AERDPVAAAAQKYKPIQSAVPGTTLGPIQINAFLGGE-KLYDTPGVHLHHRQAAVVHSDD 359
Query: 475 QKMVEIRKELQPRTYRVK------------GGQAVHVGGLMRLDLDQASVETIYVTVWAS 522
+ + L+ +++ + G GGL+R+D+ +A ET + T +
Sbjct: 360 LPALAPQNRLRGQSFDISTQSSNSTEGESLNGYTFFWGGLVRIDILKALPETRF-TFYGP 418
Query: 523 PNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASEL-GTWKDRKLKVSGTSWDVNGIDI 581
+ +H + A E ++ VG+ L PP G+D+ E G R L++ D+
Sbjct: 419 KALEIHAVPTKTATEFYQKEVGVLLTPPSGKDQMQEWKGLQSHRLLRIEFNDPKRPASDV 478
Query: 582 AAAGLGWFSL 591
A +GLGW S+
Sbjct: 479 AISGLGWISI 488
>gi|356543000|ref|XP_003539951.1| PREDICTED: nitric oxide synthase 1-like [Glycine max]
Length = 557
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 178/375 (47%), Gaps = 67/375 (17%)
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
++V +VD VDF+G F L +D A + ++LV TKVDLLP
Sbjct: 181 ALIVKLVDIVDFNGSF-----------LSRVRDLAGSNP----IILVVTKVDLLPRDTDL 225
Query: 352 TRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNA 409
+ WV +A KLN V+L S++ +G+ +++ I++ R +V+++G+ N
Sbjct: 226 HCVGDWV---VEATMRKKLNVLSVHLTSSKSLVGITGVISEIQKEKKGR-DVYILGSANV 281
Query: 410 GKSTLIN----TFAKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLL 461
GKS IN T A + V S K ++ +PGTTLG ++I L KLYDTPG+
Sbjct: 282 GKSAFINALLKTMAINDPVAASAQRYKPIQSAVPGTTLGPIQINAFL-GGGKLYDTPGVH 340
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTYR--------------VKGGQAVHV--GGLMRL 505
H + ++ ++ ++ + L+ ++ V G A + GGL+R+
Sbjct: 341 LYHRQTAVVHSEDLPILAPQSRLRGLSFPSSILSSVEEGASTIVNGLNAFSIFWGGLVRI 400
Query: 506 DLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASEL-GTWKD 564
D+ + ET +T + + +H+ E A E ++ +G+ L PP G + A G +
Sbjct: 401 DVLKVLPETC-LTFYGPKRIPIHMVPTEQAVEFYQTELGVLLTPPSGGENAENWKGLESE 459
Query: 565 RKLKVSGT---SWDVN-GIDIAAAGLGWFSL-----GLK----------GEASLTLWTYD 605
RKL++ S+D DIA +GLGWF++ LK GE L +
Sbjct: 460 RKLQIKFEDVDSYDPKPACDIAISGLGWFTVEPVSRSLKISQPKPVETAGELILAVHVPK 519
Query: 606 GIEITLREPLVLDRA 620
+EI +R P+ + +A
Sbjct: 520 AVEIFVRSPIPVGKA 534
>gi|218281649|ref|ZP_03488050.1| hypothetical protein EUBIFOR_00617 [Eubacterium biforme DSM 3989]
gi|218217256|gb|EEC90794.1| hypothetical protein EUBIFOR_00617 [Eubacterium biforme DSM 3989]
Length = 359
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 178/383 (46%), Gaps = 60/383 (15%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
+ + C RC+ +R+YG V + + + + +++ N GVV VVD F
Sbjct: 27 DASYCQRCYRIRHYGDVTINMQQGIESNATLEKI----------NKIDGVVFWVVDLFAF 76
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLP--KLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
EA ++L++KLP +V+V TK D+LP+ ++ ++ +V+HR
Sbjct: 77 -----------------EANLISRLNQKLPGKDIVMVLTKRDVLPTTLTDEKIINFVKHR 119
Query: 362 AKAGGAPKLNGV---YLVSAR---KDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLI 415
+ V YL+ ++ R + A +K NV +G NAGKST++
Sbjct: 120 LHEENIIVKDIVICGYLLKENDKSREYSSRIVNAILK--YRKNRNVIFMGVANAGKSTVL 177
Query: 416 NTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAK-AKLYDTPGLLHPHLMSMRLNRDE 474
N + LT + PGTTL ++ I P + +YDTPG+ + H + L +
Sbjct: 178 NHL-----LATKDLTTSQNPGTTLDLVPI----PFEDYTIYDTPGIENTHSLLTYLQSKD 228
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
K V K ++P ++ Q+ GL RLD+ + T V + S ++S+H GK+ N
Sbjct: 229 LKTVIPTKPIRPFVSQIFEDQSFAAAGLARLDVVVSGKAT--VVGYFSRSLSIHRGKLSN 286
Query: 535 ADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
AD +W+ H+ L P + + + T+ KL + +D+ G+GWF +
Sbjct: 287 ADALWQKHLNGMLVPCVDTSLLT-MHTFHAPKL-------EDEKMDVCIHGIGWFCIS-- 336
Query: 595 GEAS-LTLWTYDGIEITLREPLV 616
G+ + + + GI++T R+ ++
Sbjct: 337 GQVKDVYVKVHKGIQVTFRKAMI 359
>gi|399218226|emb|CCF75113.1| unnamed protein product [Babesia microti strain RI]
Length = 582
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 178/423 (42%), Gaps = 51/423 (12%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC---VD 302
+C C+ L+ Y ++ E+ P +R +R++ + + VV + V+C +
Sbjct: 127 VICKYCYKLQYYKRIDGEITPIYRPQIPENREAESRVVAHNMTPSKKVVKLPVECQVAIA 186
Query: 303 FDGMFPKRAAKSLFKKLEEAKDDA---------------------KLSKKLPKLVLVGTK 341
+G + + + + + + + ++ LS K +++ V K
Sbjct: 187 NEGFKISHSPEIISQLVYQIRPNSIIIYVLDLTNIEVTMLPELYIALSNKKLEVIFVLNK 246
Query: 342 VDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNV 401
D+LP S R+ W R K G V + S+ G L ++ +
Sbjct: 247 SDVLPHGTSLPRVKMWSRRLVKHLGNVHNENVIVCSSTSGYGFDKLEQRLEHYLCNNKYI 306
Query: 402 WVIGAQNAGKSTLINTFAKKEGVK----------VSKLTEAPIPGTTLGILRIGGILPAK 451
+V+G+ N GKSTL+N F G K V +T + +PGTTLG + G L
Sbjct: 307 YVVGSVNVGKSTLVNRFLTYVGYKEIGTIFSKRAVGGITRSSVPGTTLGHVTFG--LGKG 364
Query: 452 AKLYDTPGLLHPHLMSMRLNRD-EQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQA 510
KL DTPG+ MS L + + + I K +QP + Q++ +G L R+D +
Sbjct: 365 IKLVDTPGIPIGGQMSTILPKSIDLCAIAITKPIQPVKVILNEYQSLIIGALARVDNVKG 424
Query: 511 SVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVS 570
+ +T + S ++ K+ A ++ K H + L PP ++ LG W +L+++
Sbjct: 425 C--DLNITCYTSQKLTYKTCKLNKAGDLMKEHGSVSLHPPFFKEDLESLGDWSIYELELN 482
Query: 571 GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVL------DRAPFLE 624
G S DI GLGW + G + + +++ + P++L DR +L
Sbjct: 483 GESC-----DIVIPGLGWLTFYGNGPKTTNIHIPSSVKL-FKRPVMLSPRRQKDRKIYLS 536
Query: 625 RPG 627
G
Sbjct: 537 SRG 539
>gi|418108181|ref|ZP_12745218.1| hypothetical protein SPAR70_1728 [Streptococcus pneumoniae GA41410]
gi|418158051|ref|ZP_12794767.1| hypothetical protein SPAR41_1834 [Streptococcus pneumoniae GA16833]
gi|353778458|gb|EHD58926.1| hypothetical protein SPAR70_1728 [Streptococcus pneumoniae GA41410]
gi|353824499|gb|EHE04673.1| hypothetical protein SPAR41_1834 [Streptococcus pneumoniae GA16833]
Length = 243
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 123/250 (49%), Gaps = 26/250 (10%)
Query: 373 VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEA 432
V L SA+ ++ ++ I+ R +V+V+G N GKSTLIN ++ + +T +
Sbjct: 14 VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITGDQNVITTS 72
Query: 433 PIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVK 492
PGTTL + I L + +YDTPG++H H M+ L K V +KE++P+TY++
Sbjct: 73 RFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLN 130
Query: 493 GGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIG 552
Q + +GGL R D + T + + LH K+E A + H+G L PP
Sbjct: 131 PEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRSKLEGASAFYDKHLGTLLTPPNS 188
Query: 553 QDR------ASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
+++ + T KD+ D+ +GLGW + + G A + +W +G
Sbjct: 189 KEKEDFPRLVQHVFTIKDKT-------------DLVISGLGW--IRVTGIAKVAVWAPEG 233
Query: 607 IEITLREPLV 616
+ + +R+ ++
Sbjct: 234 VAVVIRKAII 243
>gi|418096859|ref|ZP_12733970.1| hypothetical protein SPAR40_1790 [Streptococcus pneumoniae GA16531]
gi|353768580|gb|EHD49104.1| hypothetical protein SPAR40_1790 [Streptococcus pneumoniae GA16531]
Length = 243
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 122/250 (48%), Gaps = 26/250 (10%)
Query: 373 VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEA 432
V L SA+ ++ ++ I+ R +V+V+G N GKSTLIN ++ + +T +
Sbjct: 14 VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITGDQNVITTS 72
Query: 433 PIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVK 492
PGTTL + I L + +YDTPG++H H M+ L K V +KE++P+TY++
Sbjct: 73 RFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLN 130
Query: 493 GGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIG 552
Q + +GGL R D + T + + LH K+E A + H+G L PP
Sbjct: 131 PEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRSKLEGASAFYDKHLGTLLTPPNS 188
Query: 553 QDR------ASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
+++ + T KD+ D+ +GLGW + + G A + +W +G
Sbjct: 189 KEKEDFPRLVQHVFTIKDKT-------------DLVISGLGW--IRVTGTAKVAVWAPEG 233
Query: 607 IEITLREPLV 616
+ + R+ ++
Sbjct: 234 VAVVTRKAII 243
>gi|283768325|ref|ZP_06341237.1| putative ribosome biogenesis GTPase YqeH [Bulleidia extructa W1219]
gi|283104717|gb|EFC06089.1| putative ribosome biogenesis GTPase YqeH [Bulleidia extructa W1219]
Length = 348
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 167/379 (44%), Gaps = 57/379 (15%)
Query: 242 KGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCV 301
K E C RC LR+Y P + I RL+ GV+V+V+DC
Sbjct: 23 KKEALYCQRCFRLRHYDD----------PVYSKRFGIDPRLVLQGIQNQEGVLVLVMDCF 72
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPK-LVLVGTKVDLLPSQVSPTRLDRWVRH 360
+EE+ + L + + ++LV TK D+LP+++ ++ + V
Sbjct: 73 ----------------AIEESLEQPFLQEFSGREILLVLTKRDILPAEIEEEKIVKMVVK 116
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRG-NVWVIGAQNAGKSTLINTFA 419
+ ++ P + V+ S + +LG L+ ++ + P G N +G NAGKS+L+N
Sbjct: 117 KIRSKKLP-IQQVFFHSVKLNLGNEELINYLYQY--PLGTNFIFMGLANAGKSSLLNQL- 172
Query: 420 KKEGVKVSKLTEAPIPGTTLGI--LRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
+++ LT + PGTTL LR G DTPG+ M ++ + K
Sbjct: 173 ----LEMDTLTASCYPGTTLSFSKLRKDG-----YTFIDTPGMEIRASYVMEVSESDLKK 223
Query: 478 VEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE 537
V K L R Y++ Q+ +G L R+DL E T + + +H K+E A++
Sbjct: 224 VLPNKTLVARNYQLYSPQSYFIGALFRMDL--TPTERASATFYFHDQLKIHRTKLEQAND 281
Query: 538 IWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEA 597
+++ G L+P + +D + E K + + +DI GLGW L +
Sbjct: 282 LYRRQKGKDLKPCLTKDLSEERNVEKGK-----------DKVDIVLPGLGWICLSGHFQ- 329
Query: 598 SLTLWTYDGIEITLREPLV 616
+ L+ GIE+ R+ ++
Sbjct: 330 EIKLYLPKGIEVYTRKAIL 348
>gi|421213686|ref|ZP_15670640.1| hypothetical protein AMCSP12_001572 [Streptococcus pneumoniae
2070108]
gi|395578917|gb|EJG39427.1| hypothetical protein AMCSP12_001572 [Streptococcus pneumoniae
2070108]
Length = 243
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 122/250 (48%), Gaps = 26/250 (10%)
Query: 373 VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEA 432
V L SA+ ++ ++ I+ R +V+V+G N GKSTLIN ++ + +T +
Sbjct: 14 VVLTSAQNKHAIKEVIDKIEYYRKGR-DVYVVGVTNVGKSTLINAIIQEITGDQNVITTS 72
Query: 433 PIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVK 492
PGTTL + I L + +YDTPG++H H M+ L K V +KE++P+TY++
Sbjct: 73 RFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLN 130
Query: 493 GGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIG 552
Q + +GGL R D + T + + LH K+E A + H+G L PP
Sbjct: 131 PEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRSKLEGASAFYDKHLGTLLTPPNS 188
Query: 553 QDR------ASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
+++ + T KD+ D+ +GLGW + + G A + +W +G
Sbjct: 189 KEKEDFPRLVQHVFTIKDKT-------------DLVISGLGW--IRVTGTAKVAVWAPEG 233
Query: 607 IEITLREPLV 616
+ + R+ ++
Sbjct: 234 VAVVTRKAII 243
>gi|421245585|ref|ZP_15702083.1| GTP-binding protein [Streptococcus pneumoniae 2081685]
gi|395608112|gb|EJG68208.1| GTP-binding protein [Streptococcus pneumoniae 2081685]
Length = 243
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 122/250 (48%), Gaps = 26/250 (10%)
Query: 373 VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEA 432
V L SA+ ++ ++ I+ R +V+V+G N GKSTLIN ++ + +T +
Sbjct: 14 VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITGDQNVITTS 72
Query: 433 PIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVK 492
PGTTL + I L + +YDTPG++H H M+ L K V +KE++P+TY++
Sbjct: 73 RFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLN 130
Query: 493 GGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIG 552
Q + +GGL R D + T + + LH K+E A + H+G L PP
Sbjct: 131 PEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRSKLEGASAFYDKHLGTLLTPPNS 188
Query: 553 QDR------ASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
+++ + T KD+ D+ +GLGW + + G A + +W +G
Sbjct: 189 KEKEDFPRLVQHVFTIKDKT-------------DLVISGLGW--IRVTGIAKVAVWAPEG 233
Query: 607 IEITLREPLV 616
+ + R+ ++
Sbjct: 234 VAVVTRKAII 243
>gi|417699129|ref|ZP_12348300.1| hypothetical protein SPAR69_1686 [Streptococcus pneumoniae GA41317]
gi|421218401|ref|ZP_15675295.1| hypothetical protein AMCSP13_002051 [Streptococcus pneumoniae
2070335]
gi|332199775|gb|EGJ13850.1| hypothetical protein SPAR69_1686 [Streptococcus pneumoniae GA41317]
gi|395583170|gb|EJG43619.1| hypothetical protein AMCSP13_002051 [Streptococcus pneumoniae
2070335]
Length = 243
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 122/250 (48%), Gaps = 26/250 (10%)
Query: 373 VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEA 432
V L SA+ ++ ++ I+ R +V+V+G N GKSTLIN ++ + +T +
Sbjct: 14 VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITGDQNVITTS 72
Query: 433 PIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVK 492
PGTTL + I L + +YDTPG++H H M+ L K V +KE++P+TY++
Sbjct: 73 RFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLN 130
Query: 493 GGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIG 552
Q + +GGL R D + T + + LH K+E A + H+G L PP
Sbjct: 131 PEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRSKLEGASAFYDKHLGTLLTPPNS 188
Query: 553 QDR------ASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDG 606
+++ + T KD+ D+ +GLGW + + G A + +W +G
Sbjct: 189 KEKEDFPRLVQHVFTIKDKT-------------DLVISGLGW--IRVTGIAKVAVWAPEG 233
Query: 607 IEITLREPLV 616
+ + R+ ++
Sbjct: 234 VAVVTRKAII 243
>gi|418160455|ref|ZP_12797154.1| hypothetical protein SPAR43_1796 [Streptococcus pneumoniae GA17227]
gi|353822188|gb|EHE02364.1| hypothetical protein SPAR43_1796 [Streptococcus pneumoniae GA17227]
Length = 243
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 14/244 (5%)
Query: 373 VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEA 432
V L SA+ ++ ++ I+ R +V+V+G N GKSTLIN ++ + +T +
Sbjct: 14 VVLTSAQNKHAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITGDQNVITTS 72
Query: 433 PIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVK 492
PGTTL + I L + +YDTPG++H H M+ L K V +KE++P+TY++
Sbjct: 73 RFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLN 130
Query: 493 GGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIG 552
Q + +GGL R D + T + + LH K+E A + HVG L PP
Sbjct: 131 PEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRTKLEGASAFYDKHVGTLLTPPNS 188
Query: 553 QDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLR 612
+++ +D V D+ +GLGW + + G A + +W +G+ + R
Sbjct: 189 KEK-------EDFPKLVQHVFNIKEKTDLVISGLGW--IRVTGTAKVAVWAPEGVAVVTR 239
Query: 613 EPLV 616
+ ++
Sbjct: 240 KAII 243
>gi|389843658|ref|YP_006345738.1| GTPase [Mesotoga prima MesG1.Ag.4.2]
gi|387858404|gb|AFK06495.1| putative GTPase [Mesotoga prima MesG1.Ag.4.2]
Length = 368
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 183/414 (44%), Gaps = 71/414 (17%)
Query: 205 PAGVGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEV 264
PAG+GY + RS E++ + G+ +C RC +++YG + +
Sbjct: 15 PAGLGY-------ISRS-------------VMESRLQSGKQVLCRRCFLIKHYGSLSED- 53
Query: 265 AENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKD 324
DRV+ + A V+ V+D DFDG + + + L+E
Sbjct: 54 ----------DRVVHSIDNLKEYLDLAQDVIYVIDISDFDGT----CRRDILRLLKEHTV 99
Query: 325 DAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGV 384
L+K +DLLP +V + W K PK V VS K+ G+
Sbjct: 100 HYILNK-----------IDLLPREVKIDEIRDWAASMLKV---PK-ETVRPVSVLKNHGL 144
Query: 385 RNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGIL-- 442
++L +++K + +V G N GKS+++N + E + VS+ PGTT+ +
Sbjct: 145 KSLFSYLKSASEEFVSV---GVTNVGKSSILNGLIQSEELTVSRF-----PGTTVKVASK 196
Query: 443 RIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGL 502
++GG + +YDTPG+ ++ L+ ++Q RK+L T + + V +GG
Sbjct: 197 KVGG---SAFTVYDTPGIFTKDRITDLLSVEDQSRFLPRKKLNKSTIQFHDVRTVFLGGF 253
Query: 503 MRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTW 562
+RLD+ S V+ +V++H + +E W G L+PP + S W
Sbjct: 254 VRLDVKNESDPVGIFHVFVPESVTVHETNSDTGNEEWDRWYGGILKPPFSESIRSNY-KW 312
Query: 563 KDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
K + ++ + G ++ G+GW ++ KG ++ + T +G+ +R+ L+
Sbjct: 313 KSERFRL------ITGQELHIFGMGWINVA-KGPLTIAVTTPEGVATKVRKGLI 359
>gi|428170399|gb|EKX39324.1| hypothetical protein GUITHDRAFT_114525 [Guillardia theta CCMP2712]
Length = 574
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 113/224 (50%), Gaps = 13/224 (5%)
Query: 429 LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRT 488
+T + +PGTTL + + L ++DTPGL+ P ++ L +E + + +++ T
Sbjct: 345 VTTSSLPGTTLDLTELD--LGNGYSMFDTPGLIVPSQLTNMLTMEELAVALPQHKVEHVT 402
Query: 489 YRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQ 548
YR+ G VH+G +R++L + + + T++ S V++H+GK A+E VG L+
Sbjct: 403 YRIPAGTCVHLGAFVRIEL--LTDKPFFFTIFVSNLVTIHVGKTSKAEEFRWAQVGRMLK 460
Query: 549 PPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIE 608
PP+ +R +G ++ L G SWDV DI AG GW +L G + + G+
Sbjct: 461 PPMTSERLKAVGELEETILDDYGDSWDVACTDIVIAGFGWVALTGIGPVRVRVLAPKGVG 520
Query: 609 ITLREPLVLDRAPFLERPGFWLPKAISDALGSKSKLEAKRRKKL 652
+T R PL+ PF R S + G K ++R KKL
Sbjct: 521 VTRRSPLM----PFEAR-----TSTESYSGGGDKKGNSRRTKKL 555
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 36/174 (20%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E VC RC++L++YG+V ++ + ++ P + +V VVD DF
Sbjct: 81 EKVVCVRCYNLQHYGKVNPDLTAQNAKYTEVSPAAFRSILAPL-KKQSCIVCYVVDIFDF 139
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
G F LP L + V R+ +WVR AK
Sbjct: 140 HGTF------------------------LPDLKEI----------VGRDRVKQWVREEAK 165
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPR-GNVWVIGAQNAGKSTLIN 416
G + V L+SA GV+ L ++ + R N++++GA N GKSTL+N
Sbjct: 166 ILGDYLIVDVVLISAASGYGVKLLEQQLRAWSSKRKQNIYIVGAANVGKSTLVN 219
>gi|297819358|ref|XP_002877562.1| ATNOS1/NOS1 [Arabidopsis lyrata subsp. lyrata]
gi|297323400|gb|EFH53821.1| ATNOS1/NOS1 [Arabidopsis lyrata subsp. lyrata]
Length = 560
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 170/373 (45%), Gaps = 50/373 (13%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGN--ANAGVVVMVVDCVDFD 304
+C RC L ++G + V N V A L + + ++V +VD VDF
Sbjct: 143 ICGRCQ-LLSHGHMITAVGGNGGYSGGKQFVSADELREKLSHLRHEKALIVKLVDIVDFH 201
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F R + L A ++LV TK+DLLP + WV +
Sbjct: 202 GSFLARV-----RDLVGAN----------PIILVITKIDLLPKGTDMNCIGDWV---VEV 243
Query: 365 GGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN----TF 418
KLN V+L S++ GV + + I++ R +V+++GA N GKS IN T
Sbjct: 244 TMRKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKGR-DVYILGAANVGKSAFINALLKTM 302
Query: 419 AKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
A+++ V + K ++ +PGTTLG ++I L + KLYDTPG+ H + ++ D+
Sbjct: 303 AERDPVAAAAQKYKPIQSAVPGTTLGPIQINAFLGGE-KLYDTPGVHLHHRQAAVVHSDD 361
Query: 475 QKMVEIRKELQPRTYRVK---------------GGQAVHVGGLMRLDLDQASVETIYVTV 519
+ + L+ +++ + G GGL+R+D+ +A ET + T
Sbjct: 362 LPALAPQNRLRGQSFDISTLPTQSPSSPKGESLNGYTFFWGGLVRIDILKALPETCF-TF 420
Query: 520 WASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASEL-GTWKDRKLKVSGTSWDVNG 578
+ + +H+ + A ++ +G+ L PP G+D+ E G R L++
Sbjct: 421 YGPKALDIHVVPTKTATAFYEKELGVLLTPPSGKDQMQEWKGLQSHRLLQIEINDAKRPA 480
Query: 579 IDIAAAGLGWFSL 591
D+A +GLGW S+
Sbjct: 481 SDVAISGLGWISI 493
>gi|293400788|ref|ZP_06644933.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305814|gb|EFE47058.1| ribosome biogenesis GTPase YqeH [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 360
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 171/394 (43%), Gaps = 54/394 (13%)
Query: 230 ERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNA 289
+ + K + K E C RC +R+Y ++V ++ + D V+A M +
Sbjct: 14 QSEDKTKLGYTPKPEADYCQRCFRIRHY----DDVVISMKQGINSDEVLARIAMMDA--- 66
Query: 290 NAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQV 349
+VV VVD DF+ + L K +++V TK DLLP+ +
Sbjct: 67 ---LVVWVVDLFDFEANMVSGLNRHLLHK---------------DILMVATKRDLLPATM 108
Query: 350 SPTRLDRWVRHRAKAGGAPKLNGVYLVS------ARKDLGVRNLLAFIKELAGPRGNVWV 403
S +L ++ R K ++ G+ + R + + +A+ E +V V
Sbjct: 109 SDQKLGDFLLQRLKELSI-QVKGIVICGDLMKHPRRDENNSIDEIAYAIEHYRNERDVVV 167
Query: 404 IGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHP 463
+G NAGKST++N +K LT + PGTTL I LYDTPGL
Sbjct: 168 MGMANAGKSTMLNALCEK-----GDLTTSRHPGTTLDFNEIN---MDGYTLYDTPGLTRM 219
Query: 464 HLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASP 523
+ ++ K + K L+PR Y++ Q + + G +RLDL + + +P
Sbjct: 220 DSLLTHVDDKLLKTMIPLKPLKPRGYQLYQDQTISLAGFVRLDL--LGGHKVSCVAYFAP 277
Query: 524 NVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAA 583
++ LH K E AD++W+ H+G L P I + +++++ +D+
Sbjct: 278 DLPLHRSKQEKADQLWQQHLGELLAPAIDESI---------KEMQMFEMHPKGEKVDVVI 328
Query: 584 AGLGWFSLGLKGEA-SLTLWTYDGIEITLREPLV 616
GLGWF + G+ ++ ++ +T R+ ++
Sbjct: 329 HGLGWFCVS--GDVKTIRVYVSKYANVTFRKAMI 360
>gi|373451898|ref|ZP_09543816.1| ribosome biogenesis GTPase YqeH [Eubacterium sp. 3_1_31]
gi|371967330|gb|EHO84801.1| ribosome biogenesis GTPase YqeH [Eubacterium sp. 3_1_31]
Length = 359
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 171/394 (43%), Gaps = 54/394 (13%)
Query: 230 ERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNA 289
+ + K + K E C RC +R+Y ++V ++ + D V+A M +
Sbjct: 13 QSEDKTKLGYTPKPEADYCQRCFRIRHY----DDVVISMKQGINSDEVLARIAMMDA--- 65
Query: 290 NAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQV 349
+VV VVD DF+ + L K +++V TK DLLP+ +
Sbjct: 66 ---LVVWVVDLFDFEANMVSGLNRHLLHK---------------DILMVATKRDLLPATM 107
Query: 350 SPTRLDRWVRHRAKAGGAPKLNGVYLVS------ARKDLGVRNLLAFIKELAGPRGNVWV 403
S +L ++ R K ++ G+ + R + + +A+ E +V V
Sbjct: 108 SDQKLGDFLLQRLKELSI-QVKGIVICGDLMKHPRRDENNSIDEIAYAIEHYRNERDVVV 166
Query: 404 IGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHP 463
+G NAGKST++N +K LT + PGTTL I LYDTPGL
Sbjct: 167 MGMANAGKSTMLNALCEK-----GDLTTSRHPGTTLDFNEIN---MDGYTLYDTPGLTRM 218
Query: 464 HLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASP 523
+ ++ K + K L+PR Y++ Q + + G +RLDL + + +P
Sbjct: 219 DSLLTHVDDKLLKTMIPLKPLKPRGYQLYQDQTISLAGFVRLDL--LGGHKVSCVAYFAP 276
Query: 524 NVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAA 583
++ LH K E AD++W+ H+G L P I + +++++ +D+
Sbjct: 277 DLPLHRSKQEKADQLWQQHLGELLAPAIDESI---------KEMQMFEMHPKGEKVDVVI 327
Query: 584 AGLGWFSLGLKGEA-SLTLWTYDGIEITLREPLV 616
GLGWF + G+ ++ ++ +T R+ ++
Sbjct: 328 HGLGWFCVS--GDVKTIRVYVSKYANVTFRKAMI 359
>gi|313665313|ref|YP_004047184.1| ribosome biogenesis GTPase YqeH [Mycoplasma leachii PG50]
gi|392388747|ref|YP_005907156.1| hypothetical protein MLEA_002390 [Mycoplasma leachii 99/014/6]
gi|312949512|gb|ADR24108.1| ribosome biogenesis GTPase YqeH [Mycoplasma leachii PG50]
gi|339276392|emb|CBV66971.1| Putative uncharacterized protein [Mycoplasma leachii 99/014/6]
Length = 367
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 171/393 (43%), Gaps = 37/393 (9%)
Query: 227 SKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPS 286
S + K + E C RC ++NY N++ ++ I D +F I+T L+K +
Sbjct: 9 SLLQTTNKLEQGYVNDSEHAYCLRCFKIKNY----NQLVDSEINDKEFINKIST-LIKEN 63
Query: 287 GNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP 346
N N V V+D D G S ++E D K+ +LV K+DLLP
Sbjct: 64 KNNNL-VFYYVLDIFDLFG--------SRILEIENLIKDFKV-------ILVVNKIDLLP 107
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
+ ++ ++ + K + ++L SA K V LL K + + + IGA
Sbjct: 108 KSIKLEKIRNYINNIFKNSFLKNV-EIFLTSANKINLVEPLLN--KVIKNNKNQQYFIGA 164
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKS+LIN + + + + + TTL ++I L ++D+ G+ + +
Sbjct: 165 SNVGKSSLINKMLEINQL-IPSIVVSKFFNTTLDFIKIQ--LDTNTTIFDSAGVSRKNSI 221
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ +N+ Q +KE+Q TY++ ++ G+ D ++ + ++ + ++
Sbjct: 222 ANLMNKRFQSYCYFKKEIQQFTYQLTNNNSIFFSGVCWFDYISSNNQKTSFHIYTNKEIN 281
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH +N W N+ L P I ++ +K K ++ N DI+ +GL
Sbjct: 282 LHRTNTKNVIRYWNNNRK-NLIPYINNSEKIQVYEFKFTKEHLN------NWYDISISGL 334
Query: 587 GWFSLGLKGEASLTLWT---YDGIEITLREPLV 616
GW + ++ E + + + ++L EPL+
Sbjct: 335 GWINFKVETEMIIKINIPSDEKTVLVSLNEPLI 367
>gi|56808383|ref|ZP_00366137.1| COG1161: Predicted GTPases [Streptococcus pyogenes M49 591]
Length = 214
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 112/219 (51%), Gaps = 13/219 (5%)
Query: 400 NVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPG 459
+V+V+G N GKSTLIN ++ +T + PGTTL + I L ++DTPG
Sbjct: 7 DVYVVGVTNVGKSTLINAIIQEITGNKDVITTSRFPGTTLDKIEIP--LDDGTFIFDTPG 64
Query: 460 LLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTV 519
++H H M+ L+ E K+V +KE++P+TY++ Q + +GGL R D + T
Sbjct: 65 IIHRHQMAHYLSPKELKIVSPKKEIKPKTYQLNPEQTLFLGGLSRFDFINGERQGF--TA 122
Query: 520 WASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGI 579
+ + LH K+ AD + HVG L PP EL + KL + D +
Sbjct: 123 FFDNQLELHRTKLAGADAFYDKHVGTLLTPP----DKKELTAFP--KLVRHEFTID-QKM 175
Query: 580 DIAAAGLGWFSL-GLK-GEASLTLWTYDGIEITLREPLV 616
DI +GLGW + G K +A + W +G+ + +R+ ++
Sbjct: 176 DIVFSGLGWIRVNGQKDSKAIVAAWAPEGVAVIVRKAII 214
>gi|42561081|ref|NP_975532.1| GTPase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
gi|42492578|emb|CAE77174.1| Conserved hypothetical GTPase of unknown function [Mycoplasma
mycoides subsp. mycoides SC str. PG1]
gi|301320975|gb|ADK69618.1| ribosome biogenesis GTPase YqeH [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 367
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 166/376 (44%), Gaps = 37/376 (9%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E C RC ++NY N++ ++ I D F I+T + + N N G+V V +D
Sbjct: 26 EHAYCLRCFKIKNY----NQLVDSEINDQQFINKISTLV---NENKNNGLVFYYV--LDI 76
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+F R + +E D K+ +LV K+DLLP + ++ ++ + K
Sbjct: 77 FDLFGSRILE-----IENLIKDFKV-------ILVVNKIDLLPKSIKLEKIRNYINNVFK 124
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G L ++L SA + V LL K + + + IGA N GKS+LIN +
Sbjct: 125 TGCLKNL-EIFLTSADRINLVEPLLN--KVIKNNKNQQYFIGASNVGKSSLINKMLEINQ 181
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + + + TTL + I L ++D+ G+ + ++ +N+ Q +KE
Sbjct: 182 L-IPSIVVSKYFNTTLDFIEIQ--LDTNTTIFDSAGVSRKNSIANLMNKRFQSYCYFKKE 238
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
+Q TY++ ++ G+ D +S + ++ + ++LH +N W N+
Sbjct: 239 IQQFTYQLTPNNSIFFSGVCWFDYLSSSNQKTNFHIYTNKEINLHRTNTKNVIRYWNNNR 298
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
L P I ++ +K K ++ N DI+ +GLGW + ++ E + +
Sbjct: 299 K-NLIPYINNSEKIQVYEFKFTKEHLN------NWYDISISGLGWINFKVETEMIIKINI 351
Query: 604 ---YDGIEITLREPLV 616
+ ++L EPL+
Sbjct: 352 PSDQKTVLVSLNEPLI 367
>gi|160915285|ref|ZP_02077498.1| hypothetical protein EUBDOL_01294 [Eubacterium dolichum DSM 3991]
gi|158433084|gb|EDP11373.1| putative ribosome biogenesis GTPase YqeH [Eubacterium dolichum DSM
3991]
Length = 358
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 162/386 (41%), Gaps = 63/386 (16%)
Query: 242 KGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCV 301
K + +C RC + +Y V + + I ++ + I A +V+ VVD
Sbjct: 25 KKDADLCQRCFRIIHYDDVTISMKQG-IDSYEVLQKI---------QAMNALVLWVVDVF 74
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DF+ + L K +VLV TK DLLP+ + +L +++ R
Sbjct: 75 DFEANMLHGINRHLLGK---------------DIVLVATKRDLLPATLGNEKLGKFILSR 119
Query: 362 AKAGGAPKLNGVYLV-----SARKDL--GVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
K G ++G+ + A ++ + + I R +V V+G NAGKSTL
Sbjct: 120 LKELGIV-VSGIVICGDLAKHAHEEYNDSIEQVEQAIDYYRKGR-DVVVMGMANAGKSTL 177
Query: 415 INTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
+N +LT + PGTTL + IL LYDTPGL + ++
Sbjct: 178 LNAMCDSR-----QLTTSRHPGTTLDV---NAILHHDYLLYDTPGLTREDSLLTHVDDRL 229
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
K V K L+PR Y++ + +GGL+RLDL E + + S N+ LH K
Sbjct: 230 LKQVIPLKPLKPRVYQLYEASTMSLGGLVRLDL--IGCEQVSCVAYFSENLKLHRSKQPK 287
Query: 535 ADEIWKNHVGIRLQPPIG----QDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFS 590
A+E+WK H L P I Q R G D KL D+ GLGWF
Sbjct: 288 AEELWKKHYAEMLSPTIASLEEQQRFEHHGV--DGKL------------DVVIHGLGWFC 333
Query: 591 LGLKGEASLTLWTYDGIEITLREPLV 616
+ K + + +G +T R+ ++
Sbjct: 334 ISGKLDEIVVYVPKNG-NVTFRKAMI 358
>gi|30692870|ref|NP_850666.1| Nitric oxide synthase 1 [Arabidopsis thaliana]
gi|75115358|sp|Q66GP9.1|NOA1_ARATH RecName: Full=NO-associated protein 1, chloroplastic/mitochondrial;
Short=AtNOA1; AltName: Full=Dubious mitochondrial nitric
oxide synthase 1; Short=AtNOS1; AltName: Full=GTPase
NOA1; AltName: Full=Protein RESISTANT TO INHIBITION BY
FOSMIDOMYCIN 1; Flags: Precursor
gi|51536476|gb|AAU05476.1| At3g47450 [Arabidopsis thaliana]
gi|53850493|gb|AAU95423.1| At3g47450 [Arabidopsis thaliana]
gi|110740509|dbj|BAE98360.1| hypothetical protein [Arabidopsis thaliana]
gi|332644762|gb|AEE78283.1| Nitric oxide synthase 1 [Arabidopsis thaliana]
Length = 561
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 170/373 (45%), Gaps = 50/373 (13%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGN--ANAGVVVMVVDCVDFD 304
+C RC L ++G + V N V A L + + ++V +VD VDF+
Sbjct: 144 ICGRCQ-LLSHGHMITAVGGNGGYPGGKQFVSADELREKLSHLRHEKALIVKLVDIVDFN 202
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F R + L A ++LV TK+DLLP + WV +
Sbjct: 203 GSFLARV-----RDLVGAN----------PIILVITKIDLLPKGTDMNCIGDWV---VEV 244
Query: 365 GGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN----TF 418
KLN V+L S++ GV + + I++ R +V+++GA N GKS IN T
Sbjct: 245 TMRKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKGR-DVYILGAANVGKSAFINALLKTM 303
Query: 419 AKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
A+++ V + K ++ +PGTTLG ++I + + KLYDTPG+ H + ++ D+
Sbjct: 304 AERDPVAAAAQKYKPIQSAVPGTTLGPIQINAFVGGE-KLYDTPGVHLHHRQAAVVHSDD 362
Query: 475 QKMVEIRKELQPRTYRVK---------------GGQAVHVGGLMRLDLDQASVETIYVTV 519
+ + L+ +++ + G GGL+R+D+ +A ET + T
Sbjct: 363 LPALAPQNRLRGQSFDISTLPTQSSSSPKGESLNGYTFFWGGLVRIDILKALPETCF-TF 421
Query: 520 WASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASEL-GTWKDRKLKVSGTSWDVNG 578
+ + +H + A ++ +G+ L PP G+++ E G R L++
Sbjct: 422 YGPKALEIHAVPTKTATAFYEKELGVLLTPPSGKNQMQEWKGLQSHRLLQIEINDAKRPA 481
Query: 579 IDIAAAGLGWFSL 591
D+A +GLGW S+
Sbjct: 482 SDVAISGLGWISI 494
>gi|255539795|ref|XP_002510962.1| Nitric-oxide synthase, putative [Ricinus communis]
gi|223550077|gb|EEF51564.1| Nitric-oxide synthase, putative [Ricinus communis]
Length = 567
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 158/327 (48%), Gaps = 52/327 (15%)
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV +VD VDF+G F L +D A + ++LV TKVDLLP +
Sbjct: 198 LVVKLVDIVDFNGSF-----------LARIRDLAGANP----IILVVTKVDLLPKETDFN 242
Query: 353 RLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
+ WV +A KLN V+L S++ +G+ +++ I++ R +V+++G+ N G
Sbjct: 243 CIGDWV---VEATTKKKLNVLSVHLTSSKSLVGIAGVVSEIQKEKKGR-DVYILGSANVG 298
Query: 411 KSTLINTFAKKEG--------VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLH 462
KS IN K + + ++ +PGTTLG ++I L KL+DTPG+
Sbjct: 299 KSAFINALLKMMAQRDPAAAAARKYRPIQSAVPGTTLGSIQIDAFL-GGGKLFDTPGVHL 357
Query: 463 PHLMSMRLNRDEQKMVEIRKELQPRTYRVKG------------GQAVHVGGLMRLDLDQA 510
H + + ++ ++ R L+ +++ V G ++ GGL+R+D+ +
Sbjct: 358 HHRQAAVVQSEDLPILAPRSRLRGQSFPVCSLQTDKFESNGLNGFSIFWGGLVRIDVLKV 417
Query: 511 SVETIYVTVWASPNVSLHLGKIENADEIWK--NHVGIRLQPPIGQDRASELGTWKD---- 564
ET +T + + H+ + ADE ++ +G+ L PP G + A + WK
Sbjct: 418 LPET-SLTFYGPKALQFHIVPTDEADEFYQASKELGVLLTPPTGIEGAKD---WKGLGII 473
Query: 565 RKLKVSGTSWDVNGIDIAAAGLGWFSL 591
R+L++ + D+A +GLGW ++
Sbjct: 474 RQLQIKFEDAERPASDVAISGLGWIAV 500
>gi|167998362|ref|XP_001751887.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696985|gb|EDQ83322.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 455
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 154/320 (48%), Gaps = 41/320 (12%)
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
++V +VD VDF+G F L +D L P ++LV TKVDLLP
Sbjct: 105 ALIVKLVDIVDFNGSF-----------LTRVRD---LVGSNP-IILVVTKVDLLPKGTDL 149
Query: 352 TRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNA 409
+ WV +A A KLN V+L SA+ G+ A + R +V+V+G+ N
Sbjct: 150 AAVGDWV---IQATIAKKLNVISVHLTSAKAATGISGFSALMLRQRQGR-DVYVLGSANV 205
Query: 410 GKSTLINTFAKKEG--------VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLL 461
GKS I+T + G + + ++ +PGTTLG ++I LYDTPG+
Sbjct: 206 GKSAFISTLLRDMGERDPIAAAAQRFRPIQSAMPGTTLGPIQIDA-FSGGGSLYDTPGVH 264
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTYRVKG------GQAVHVGGLMRLDLDQASVETI 515
H ++ ++ ++ ++ RK L R GQ++ GG++R+D+ +A E I
Sbjct: 265 LHHRLAAAVSPEDLPLLAPRKRLAGRLISAPDPSLSLVGQSIFWGGVVRIDVLEAP-ENI 323
Query: 516 YVTVWASPNVSLHLGKIE-NADEIWKNHVGIRLQPPIGQDRASEL-GTWKDRKLKVSGTS 573
+T + PN LG + A+ ++ VG+RL PP G DRA G ++ + S
Sbjct: 324 ALTFYG-PNSIPVLGTLTPQAEVFYEKEVGVRLFPP-GGDRAKNWPGLVNQEVVRFTVNS 381
Query: 574 WDVNGIDIAAAGLGWFSLGL 593
D+A +GLGW ++G+
Sbjct: 382 RKRPAGDLAISGLGWIAVGV 401
>gi|310778332|ref|YP_003966665.1| ribosome biogenesis GTPase YqeH [Ilyobacter polytropus DSM 2926]
gi|309747655|gb|ADO82317.1| ribosome biogenesis GTPase YqeH [Ilyobacter polytropus DSM 2926]
Length = 370
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 174/389 (44%), Gaps = 48/389 (12%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQ-VKNEVAENLIPDFDFDRVIATRLMKPSGNANA 291
K E++KE C RC ++NYG+ + E+ + D+ + + + + A
Sbjct: 27 KSVLESRKE----IYCQRCFKIKNYGEYLPVEMTKE-----DYRKEVGKQAER------A 71
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
VV+ V D +DF+G F L +K D+ ++ K+DL+P + P
Sbjct: 72 DVVLAVFDIIDFEGSFDDEILDILREK------DS---------IIAINKLDLVPGEKHP 116
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
+ + WV+ R G L+ + ++SA+ GV ++ ++ V+G N GK
Sbjct: 117 SEVSDWVKERLADEGIAPLD-IAILSAKSGYGVNGIIRKLRHFFPDGAKAMVLGTTNVGK 175
Query: 412 STLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
S++IN + V SK PGTTL L I K L DTPGL+ +S +
Sbjct: 176 SSIINGLLGDKKVTTSKY-----PGTTLKSLE-NIISGTKLTLIDTPGLIPEGRVSDMVC 229
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
+ + E+ +T++++ + + GGL+ + + + E + +AS +VS H
Sbjct: 230 EECNLKIVPANEISRKTFKLEKDRVLMFGGLLWMKVMNS--EKAIFSAFASKDVSFHETN 287
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDV-NGIDIAAAGLGWFS 590
+++ ++H G + PP + R L + W V +G ++ GLGW S
Sbjct: 288 EGRLEDLLRDHSGDAISPPCEKCRDEYAA------LPMKKEEWTVESGEELVFKGLGWIS 341
Query: 591 LGLKGEASLTLWTYDGIEITLREPLVLDR 619
+ +G ++ + +G EI LR+ + R
Sbjct: 342 VK-RGPLTIEVTIPEGAEIILRDAFIKPR 369
>gi|328773495|gb|EGF83532.1| hypothetical protein BATDEDRAFT_85971 [Batrachochytrium
dendrobatidis JAM81]
Length = 496
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 171/413 (41%), Gaps = 61/413 (14%)
Query: 237 EAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVM 296
A KE+ V +C RCH+L+++ K++V + + TR G+VV+
Sbjct: 117 NASKEEKVVPICQRCHNLKHHN--KSQVPATFSTVHSQFKSLKTR--------TGGLVVL 166
Query: 297 VVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR 356
+VD D L +D + +++ K+DL+P + +P +
Sbjct: 167 IVDVYDLPCTL-----------LPNLRDLVGMKN----VIVAINKIDLIPKKDTPKQYID 211
Query: 357 WVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN 416
WVR R + + +SA K G+ +L+ I + +++++GA N GKS++IN
Sbjct: 212 WVRSRIQTSRHTGPISIIPISATKGTGIDSLVKAIVDNRNSNEDIYMVGATNVGKSSVIN 271
Query: 417 TFAKKEGVK-------VSKLTEAPIP------GTTLGILRIGGILPA-------KAKLYD 456
G K + T AP+P GT +G I L D
Sbjct: 272 QIVTHAGYKGFLTTSNFAGTTIAPVPIPISSFGTQFFPNSLGDISDPDHDARKDTGHLID 331
Query: 457 TPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIY 516
T G + ++ L E + V + ++PR ++ G+ + G L+RL++ + + +
Sbjct: 332 TVGTYNSQQLTHFLASTEFQFVVPKTSIRPRKVNLRPGKNIWFGALVRLEIVKTKTASSF 391
Query: 517 VTVWASPNVSLHLGKIENADEIWKNHVGIRLQ---PPIGQDRASELGTWKDRKLKVSGTS 573
+ + +H + +W H GI Q PP G+DR + L + S +
Sbjct: 392 -WFYGCHVLPIHGCRESRMASLWDEHAGINSQIMTPPYGKDRINALPPFA----IASESR 446
Query: 574 WDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLERP 626
++ +G I GLGW + + GE +WT G+ I D P E+P
Sbjct: 447 YNKDGTRIWLGGLGW--IVMYGELHFRVWTPGGVGI------YTDSDPTSEKP 491
>gi|331703546|ref|YP_004400233.1| GTPase [Mycoplasma mycoides subsp. capri LC str. 95010]
gi|328802101|emb|CBW54255.1| Conserved hypothetical protein, probable GTPase [Mycoplasma
mycoides subsp. capri LC str. 95010]
Length = 367
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 165/376 (43%), Gaps = 37/376 (9%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E C RC ++NY N++ ++ I D F I+T L+ + N N V V+D D
Sbjct: 26 EHAYCLRCFKIKNY----NQLVDSEINDQQFINKIST-LVNENKN-NDLVFYYVLDIFDL 79
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
G S ++E D K+ +LV K+DLLP + ++ ++ + K
Sbjct: 80 FG--------SRILEIENLIKDFKV-------ILVVNKIDLLPKSIKLEKIRNYINNVFK 124
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
L ++L SA K V LL K + + + IGA N GKS+LIN +
Sbjct: 125 TSCLKNL-EIFLTSANKINLVEPLLN--KVIKNNKNQQYFIGASNVGKSSLINKMLEINQ 181
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + + + TTL + I L A ++D+ G+ + ++ +N+ Q +KE
Sbjct: 182 L-IPSIVVSKFFNTTLDFIEIQ--LDANTTIFDSAGVSRKNSIANLMNKRFQSYCYFKKE 238
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
+Q TY++ ++ G+ D +S + ++ + ++LH +N W N+
Sbjct: 239 IQQFTYQLTPNNSIFFSGVCWFDYLSSSNQKTNFHIYTNKEINLHRTNTKNVIRYWNNNR 298
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
L P I ++ +K K ++ N DI+ +GLGW + ++ E + +
Sbjct: 299 K-NLIPYINNSDKIQVYEFKFTKEHLN------NWYDISISGLGWINFKVETEMIIKINI 351
Query: 604 ---YDGIEITLREPLV 616
+ ++L EPL+
Sbjct: 352 PSDQKTVLVSLNEPLI 367
>gi|42565686|ref|NP_190329.2| Nitric oxide synthase 1 [Arabidopsis thaliana]
gi|332644761|gb|AEE78282.1| Nitric oxide synthase 1 [Arabidopsis thaliana]
Length = 561
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 170/373 (45%), Gaps = 50/373 (13%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGN--ANAGVVVMVVDCVDFD 304
+C RC L ++G + V N V A L + + ++V +VD VDF+
Sbjct: 144 ICGRCQ-LLSHGHMITAVGGNGGYPGGKQFVSADELREKLSHLRHEKALIVKLVDIVDFN 202
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F R + L A ++LV TK+DLLP + WV +
Sbjct: 203 GSFLARV-----RDLVGAN----------PIILVITKIDLLPKGTDMNCIGDWV---VEV 244
Query: 365 GGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN----TF 418
KLN V+L S++ GV + + I++ R +V+++GA N GKS IN T
Sbjct: 245 TMRKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKGR-DVYILGAANVGKSAFINALLKTM 303
Query: 419 AKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
A+++ V + K ++ +PGTTLG ++I + + KLYDTPG+ H + ++ D+
Sbjct: 304 AERDPVAAAAQKYKPIQSAVPGTTLGPIQINAFVGGE-KLYDTPGVHLHHRQAAVVHSDD 362
Query: 475 QKMVEIRKELQPRTYRVK---------------GGQAVHVGGLMRLDLDQASVETIYVTV 519
+ + L+ +++ + G GGL+R+D+ +A ET + T
Sbjct: 363 LPALAPQNRLRGQSFDISTLPTQSSSSPKGESLNGYTFFWGGLVRIDILKALPETCF-TF 421
Query: 520 WASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASEL-GTWKDRKLKVSGTSWDVNG 578
+ + +H + A ++ +G+ L PP G+++ E G R L++
Sbjct: 422 YGPKALEIHAVPTKTATAFYEAKLGVLLTPPSGKNQMQEWKGLQSHRLLQIEINDAKRPA 481
Query: 579 IDIAAAGLGWFSL 591
D+A +GLGW S+
Sbjct: 482 SDVAISGLGWISI 494
>gi|403220448|dbj|BAM38581.1| GTPase [Theileria orientalis strain Shintoku]
Length = 585
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 146/322 (45%), Gaps = 38/322 (11%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKD----------LGV 384
++ + K+D+LP + + W+R + G K V VS+ K +G
Sbjct: 270 VIWIANKLDVLPKGCEASEIKSWLRSVVRHIGNSKSFNVIPVSSSKGRCRQQQTFEGVGF 329
Query: 385 RNLLAFIKEL--AGPRGNVWVIGAQNAGKSTLINTF-----AKKEGV-----KVSKLTEA 432
L A +KE AG N++V+GA N GKST ++ F K G V T +
Sbjct: 330 DQLEARLKEYLKAGEPRNIYVVGATNVGKSTFVDRFLDYIHYKHVGTLNLRRSVGGATRS 389
Query: 433 PIPGTTLGILRIGGILPAKAKLYDTPGL-LHPHLMSMRLNRDEQKMVEIRKELQPRTYRV 491
IPGTTL + G LP KL DTPG+ + L S+ + + + K + P ++
Sbjct: 390 AIPGTTLEFIEFG--LPKGFKLVDTPGIPIISQLPSLLYKPVDLLSISMTKTINPACIKL 447
Query: 492 KGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPI 551
+ G+++ +GG+ R+D + S TI + V++ + + +++I VG +L PP
Sbjct: 448 EEGKSLLIGGVARIDHVEGSSCTI--QCYFGNGVTMKVCRSVASEDIMNYQVGYKLYPPH 505
Query: 552 GQDRASELGTWKDRKLKVSGTSWDVNGI----DIAAAGLGWFSLGLKGEASLTLWTYDGI 607
++ +L + ++ V + NG + GLGWFS G + + GI
Sbjct: 506 SKEDYKKLTPFSKYRVTV-----NCNGTGALDEFVICGLGWFSFNGTGPKIIEIRIPKGI 560
Query: 608 EITLREPLVLDRAP-FLERPGF 628
LR P ++ P +++P F
Sbjct: 561 NF-LRRPAMISSPPRRIDKPNF 581
>gi|256383799|gb|ACU78369.1| ribosome biogenesis GTPase YqeH [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256384629|gb|ACU79198.1| ribosome biogenesis GTPase YqeH [Mycoplasma mycoides subsp. capri
str. GM12]
gi|296455327|gb|ADH21562.1| ribosome biogenesis GTPase YqeH [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 367
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 163/376 (43%), Gaps = 37/376 (9%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E C RC ++NY N++ ++ I D F I+ L+ + N N V V+D D
Sbjct: 26 EHAYCLRCFKIKNY----NQLVDSEINDQQFINKISA-LVNENKN-NDLVFYYVLDIFDL 79
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
G S ++E D K+ +LV K+DLLP + ++ ++ + K
Sbjct: 80 FG--------SRILEIESLIKDFKV-------ILVVNKIDLLPKSIKLEKIRNYINNVFK 124
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
L ++L SA K V LL K + + + IGA N GKS+LIN +
Sbjct: 125 TSCLKNL-EIFLTSANKINLVEPLLN--KVIKNNKNQQYFIGASNVGKSSLINKMLEINQ 181
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ + + + TTL + I L ++D+ G+ + ++ +N+ Q +KE
Sbjct: 182 L-IPSIIVSKYFNTTLDFIEIQ--LDTNTTIFDSAGVSRKNSIANLMNKRFQSYCYFKKE 238
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
+Q TY++ ++ G+ D +S + ++ + ++LH +N W N+
Sbjct: 239 IQQFTYQLTANNSIFFSGVCWFDYLSSSSKKTNFHIYTNKEINLHRTNTKNVIRYWNNNR 298
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWT 603
L P I ++ +K K ++ N DI+ +GLGW + ++ E + +
Sbjct: 299 K-NLIPYISNSEKIQVYEFKFTKEHLN------NWYDISISGLGWINFKVETEMIIKINI 351
Query: 604 ---YDGIEITLREPLV 616
+ ++L EPL+
Sbjct: 352 PSDQKTVLVSLNEPLI 367
>gi|343525560|ref|ZP_08762515.1| ferrous iron transport protein B-like protein [Streptococcus
constellatus subsp. pharyngis SK1060 = CCUG 46377]
gi|343395830|gb|EGV08368.1| ferrous iron transport protein B-like protein [Streptococcus
constellatus subsp. pharyngis SK1060 = CCUG 46377]
Length = 197
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 373 VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEA 432
V L SA+ ++ L+ I++ R +V+V+G N GKSTLIN ++ +T +
Sbjct: 15 VVLTSAQNKQAIKELIEKIEQYRKGR-DVYVVGVTNVGKSTLINAIIQEITGDKDIITTS 73
Query: 433 PIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVK 492
PGTTL + I L + +YDTPG++H H M+ L+ K V +KE++P+TY++
Sbjct: 74 RFPGTTLDKIEIP--LVDGSHIYDTPGIIHRHQMAHYLSAKNLKYVSPKKEIKPKTYQLN 131
Query: 493 GGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPP 550
Q + +GGL R D + + T + + LH K+ A E ++ HVG L PP
Sbjct: 132 PEQTLFLGGLGRFDFVSGNKQGF--TAYFDNELQLHRTKLAGAGEFYEKHVGSLLTPP 187
>gi|156083447|ref|XP_001609207.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796458|gb|EDO05639.1| conserved hypothetical protein [Babesia bovis]
Length = 579
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 141/309 (45%), Gaps = 35/309 (11%)
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNL 387
L K +++ V KVD+LP + + RW+R + G K + V++VS+ K +G +L
Sbjct: 267 LRNKSIEVIWVINKVDVLPYRTDLPEIKRWLRSIVRHIGNAKNSDVFMVSSTKGIGFDSL 326
Query: 388 LAFIKEL--AGPRGNVWVIGAQNAGKSTLIN-----------------------TFAKKE 422
+KE G + +V+GA N GKST +N T K
Sbjct: 327 EKRLKESIKIGQARDTYVVGAVNTGKSTFVNRLLHYIHYRYVASTLMTKCSDAGTLNIKR 386
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM-VEIR 481
G V +T + PG+TLG + G L L DTPG+ ++ L + +
Sbjct: 387 G--VGGVTRSATPGSTLGFVDFG--LFGGFNLVDTPGIPVASTVTQLLTTPADMFSIAMN 442
Query: 482 KELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKN 541
K + P R++ GQ++ +G L+R+D + V ++ + S V++ + A +I K
Sbjct: 443 KRIDPTVIRMEPGQSLLLGALIRIDFVEGHVAIVH--CYISSGVTMETCRTVAASDIMKY 500
Query: 542 HVGIRLQPPIGQDRASELGTWKDRKLKV-SGTSWDVNGIDIAAAGLGWFSLGLKGEASLT 600
G+++ PP + +L W ++++ ++ ++ DI GLGW S+ G +
Sbjct: 501 KAGVKIYPPHSKQNYEKLLPWSTYRVELNCNAAFPLD--DIVLPGLGWLSITGTGPKIIE 558
Query: 601 LWTYDGIEI 609
+ G++I
Sbjct: 559 ISAPKGLDI 567
>gi|110004623|emb|CAK98959.1| conserved hypothetical gtp binding protein [Spiroplasma citri]
Length = 358
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 164/371 (44%), Gaps = 47/371 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG-VVVMVVDCVDFDGM 306
C RC L +Y NE+ +P DF L K + + V+D D DG
Sbjct: 33 CYRCFRLTHY----NELVTYNVPAIDF-------LAKLRQDYHLSWHYFYVLDVYDLDG- 80
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
+ A LE+ + K++ L+ K+DL+ ++P ++ ++ +
Sbjct: 81 -TRELA------LEQLLQNNKVT-------LIINKIDLVNKLINPHKIITYITELFRTSV 126
Query: 367 A-PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
KL + LVS K+ G+ L +IK ++ +G+ N GKSTL+N+ K +
Sbjct: 127 LFSKLEDIILVSGLKNYGLDELWRYIKR---QTNDIVFVGSSNTGKSTLLNSLIKLTNQQ 183
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
K+T + TTLG + + L + K+YDTPG+++ H + L + + M+ ++ L+
Sbjct: 184 -QKITVSNNLATTLGKIVVN--LGTRHKVYDTPGIMNKHSLLSYLAENNKNMIT-KQLLK 239
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P T+++ Q + GL + + + + N+ LH K+ N D + +H+
Sbjct: 240 PMTFQLNLEQTIFYEGLASFSYLTGLKTSFHF--YKNNNLKLHRTKLSNKDYYFTHHLST 297
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
+ W +R ++++ + + AGLGW S + + + T+
Sbjct: 298 ------AAVKLKNYQEWTERVIEIN----EPGNYSLFIAGLGWISFKGQSGQKIMVGTHQ 347
Query: 606 GIEITLREPLV 616
I+ITLR+ +
Sbjct: 348 NIKITLRKQFI 358
>gi|340751857|ref|ZP_08688667.1| ribosome biogenesis GTPase YqeH [Fusobacterium mortiferum ATCC
9817]
gi|229420821|gb|EEO35868.1| ribosome biogenesis GTPase YqeH [Fusobacterium mortiferum ATCC
9817]
Length = 371
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 164/348 (47%), Gaps = 45/348 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC ++NYG+ + L D D+ +V+ ++ N+ V + V D +DF+G F
Sbjct: 37 CQRCFKIKNYGKY---MPVRLTRD-DYRKVVQEEMV------NSQVAIAVFDIIDFEGSF 86
Query: 308 PKRAAKSLFKKLEEAKDDAKLS--KKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
DD L +++ +V++ K+DL+P + P+ + WV+ R
Sbjct: 87 ----------------DDEILDVLREMDSIVVI-NKLDLIPDEKHPSEVANWVKVRLAEE 129
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G L+ + +VS++ G+ + IK V+G N GKS+++N + V
Sbjct: 130 GIAPLD-IAIVSSKNGYGINGIFKKIKHFYPDGVEALVLGVTNVGKSSIVNRLLGLKKVT 188
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMS-MRLNRDEQKMVEIRKEL 484
VSK PGTTL +R I K L DTPGL+ +S + KMV E+
Sbjct: 189 VSKY-----PGTTLKSVR-NQIPHTKITLVDTPGLIPEGRISDLVCENCNLKMVP-ANEI 241
Query: 485 QPRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
+T+++ G+A+ +G L+ L++ ++ I+ +++A+ +V+ H + E+ K
Sbjct: 242 SRKTFKMSKGRALIIGELLWFRILNEDEMKPIF-SLYAAKDVTFHETNEDKLKELLKTDR 300
Query: 544 GIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
G L PP ++ E + K +V+ + G ++ GLGW S+
Sbjct: 301 GDLLTPPC-ENCIDEYRKLEKIKHRVTVKT----GEELVFKGLGWISV 343
>gi|421145311|ref|ZP_15605194.1| GTP-binding protein [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
gi|395488292|gb|EJG09164.1| GTP-binding protein [Fusobacterium nucleatum subsp. fusiforme ATCC
51190]
Length = 366
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 168/375 (44%), Gaps = 47/375 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ A N + D+ + + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----AVNKMTREDYKKEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L KD +++ K+DL+P + P+ + WV+ R
Sbjct: 85 DVEILDIL-----REKDS----------IVIVNKLDLIPDEKHPSEVANWVKDRLAEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K+ V VS
Sbjct: 130 VPLD-IAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKKIVTVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMS-MRLNRDEQKMVEIRKELQ 485
K PGTT I ++P LYDTPGL+ S + + QK++ E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLVCDNCAQKIIP-SGEIS 240
Query: 486 PRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+T++ K + + +G L++ L+ ++ I+ +++A+ +V H IE A E+ G
Sbjct: 241 RKTFKAKHNRMIMIGNLVKFKILNNDEIKPIF-SIYAAKDVQFHETTIEKAKEL---EAG 296
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
P D E ++ KV+ T G ++ GL W S+ +G ++ +
Sbjct: 297 NFFTIPC--DCCKE---EYNKHKKVNKTLTINTGEELVFKGLAWVSVK-RGPLNIQITLP 350
Query: 605 DGIEITLREPLVLDR 619
+ IEI++R+ + R
Sbjct: 351 EEIEISIRKAFINPR 365
>gi|419524131|ref|ZP_14063706.1| GTPase family protein [Streptococcus pneumoniae GA13723]
gi|379556539|gb|EHZ21594.1| GTPase family protein [Streptococcus pneumoniae GA13723]
Length = 196
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 373 VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEA 432
V L SA+ ++ ++ I+ R +V+V+G N GKSTLIN ++ + +T +
Sbjct: 14 VVLTSAQNKYAIKEVIDKIEHYRKGR-DVYVVGVTNVGKSTLINAIIQEITGDQNVITTS 72
Query: 433 PIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVK 492
PGTTL + I L + +YDTPG++H H M+ L K V +KE++P+TY++
Sbjct: 73 RFPGTTLDKIEIP--LDDGSYIYDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLN 130
Query: 493 GGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIG 552
Q + +GGL R D + T + + LH K+E A + H+G L PP
Sbjct: 131 PEQTLFLGGLGRFDFIAGEKQGF--TAFFDNELKLHRSKLEGASAFYDKHLGTLLTPPNS 188
Query: 553 QDRASELG 560
+++ G
Sbjct: 189 KEKKISQG 196
>gi|421526409|ref|ZP_15973017.1| GTP-binding protein [Fusobacterium nucleatum ChDC F128]
gi|402257487|gb|EJU07961.1| GTP-binding protein [Fusobacterium nucleatum ChDC F128]
Length = 366
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 169/375 (45%), Gaps = 47/375 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ + N + D+ + + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----SVNKMTREDYKKEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L +K D+ +++ K+DL+P + P+ + WV+ R
Sbjct: 85 DVEILDILREK------DS---------IVIVNKLDLIPDEKHPSEVANWVKDRLAEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K+ VS
Sbjct: 130 APLD-IAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKKIATVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMS-MRLNRDEQKMVEIRKELQ 485
K PGTT I ++P LYDTPGL+ S + + QK++ E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLVCDHCAQKIIP-ASEIS 240
Query: 486 PRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+T++ K + + +G L++ L+ ++ I+ +++A+ +V H IE + E+ +G
Sbjct: 241 RKTFKAKHNRMIMIGNLIKFKILNDDEIKPIF-SIYAAKDVQFHETTIEKSKEL---EMG 296
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
P + ++ KV T G ++ GLGW S+ +G ++ +
Sbjct: 297 DFFTIPCECCKEEY-----NKHKKVDKTLTINTGEELVFKGLGWVSVK-RGPLNIQITLP 350
Query: 605 DGIEITLREPLVLDR 619
+ IEI++R+ + R
Sbjct: 351 EEIEISIRKAFINPR 365
>gi|344205187|ref|YP_004790329.1| ribosome biogenesis GTPase YqeH [Mycoplasma putrefaciens KS1]
gi|343957110|gb|AEM68825.1| ribosome biogenesis GTPase YqeH [Mycoplasma putrefaciens KS1]
Length = 363
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 178/383 (46%), Gaps = 63/383 (16%)
Query: 248 CARCHSLRNYGQ-VKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
C RC ++NY Q V NE+A + +F FDR+ RL+ + + V+D D +G
Sbjct: 30 CLRCFKIKNYNQLVSNEIA---VGEF-FDRI--QRLVDQADED--LIFYYVLDVFDIEG- 80
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
S ++E+ + K KLV+ K+DLLP V +++ ++ +K
Sbjct: 81 -------SRIAEIEKV-----IKKHTVKLVI--NKIDLLPKSVKLSKIKNYI---SKLFA 123
Query: 367 APKLNG--VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGV 424
LN + LVS++ L + I+ + + IGA N GKS+LIN + +
Sbjct: 124 NTSLNNADILLVSSKTLNLAEPLFSEIQN--NNQYQQYFIGASNVGKSSLINKMLELSNL 181
Query: 425 KVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKEL 484
++ + TTL + I L A +YD+ G+ + +S +++ K ++EL
Sbjct: 182 S-PRIVVSNFLNTTLEFICIR--LDANTVIYDSAGITRSNSISNLMDQKFLKYCYFKQEL 238
Query: 485 QPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+ +YR+ ++ G+ D Q+ +T + ++ + N++LH + NA + WK +
Sbjct: 239 KQFSYRLSSNNSIFFAGVAWFDY-QSETKTDF-HIYVNKNINLHRTQTNNAIDYWKKNHK 296
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNG-IDIAAAGLGWFSLGLK--------- 594
+ L P I + ++ T+ + S T D+N DI+ +GLGW + +K
Sbjct: 297 V-LIPHIS---SQKINTY-----QFSFTKNDLNQEFDISISGLGWINFVVKEPLNIKIKI 347
Query: 595 -GEASLTLWTYDGIEITLREPLV 616
GE TL ++LR+PL+
Sbjct: 348 PGETKSTL-------VSLRKPLI 363
>gi|294782272|ref|ZP_06747598.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 1_1_41FAA]
gi|294480913|gb|EFG28688.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 1_1_41FAA]
Length = 366
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 166/378 (43%), Gaps = 45/378 (11%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E T C RC L++YG+ + N + D+ + + L + +V+ V D +DF
Sbjct: 31 EDTYCQRCFQLKHYGKY----STNKMTREDYKKEVGKLL------DDVKLVIAVFDIIDF 80
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G F L +K D+ ++V K+DL+P + P+ + WV+ R
Sbjct: 81 EGSFDVEILDILREK------DS---------IVVVNKLDLIPDEKHPSEVANWVKDRLA 125
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
L+ + +VS + GV + IK N VIG N GKS++IN K
Sbjct: 126 EESIAPLD-IAIVSTKNGYGVNGIFKKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKRI 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK 482
VSK PGTT I ++P LYDTPGL+ S L + +
Sbjct: 185 ATVSKY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLLCDSCAQKIIPAG 237
Query: 483 ELQPRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKN 541
E+ +T++ K + + + L+++ L+ V+ I+ ++A+ +V H IE A E+ +
Sbjct: 238 EISRKTFKAKYDRIIMIDNLVKIRVLNDEEVKPIF-AIYAAKDVKFHETTIERAKELEE- 295
Query: 542 HVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTL 601
G P R ++ K++ T G ++ GLGW S+ +G + +
Sbjct: 296 --GNFFDIPCECCRDEY-----NKHKKITKTLTIKTGEELVFKGLGWVSVK-RGPLKIEV 347
Query: 602 WTYDGIEITLREPLVLDR 619
+ IEI++R+ + R
Sbjct: 348 TLAEEIEISIRKAFIKPR 365
>gi|294955562|ref|XP_002788567.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239904108|gb|EER20363.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 574
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 166/356 (46%), Gaps = 45/356 (12%)
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP-SQVSP 351
+V+M+VD +DF+ S+ +L E+ L +++ V K+D +P +
Sbjct: 163 LVLMLVDILDFES--------SIVPELFESCRQKNL-----QVMFVINKIDGIPFYEKKK 209
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAG---PRGNVWVIGAQN 408
++ +W ++ + V LVS+ G L +++ PR ++++G N
Sbjct: 210 HQIRQWATRMSRQIKNAHWSDVVLVSSLNGTGFAELEDRMRQYLSADKPRW-IYIVGRVN 268
Query: 409 AGKSTLINTFAKKEGVK----------VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTP 458
GKST +N + + G +T +P+PGTT+ + G LP K +L D+P
Sbjct: 269 TGKSTFVNRWLRHIGYTHLGTVNYKRGTGGITRSPVPGTTMQFVTFG--LPRKFRLVDSP 326
Query: 459 GLLHPHLMSMRLN--RDEQKMVEIRKE-LQPRTYRVKGGQAVHVGG-LMRLDLDQASVE- 513
G+ +S L +D + R+ ++P T+ +K G+++ +GG L R+D AS +
Sbjct: 327 GIPSKVQLSSFLEDPKDLYDLSLCRQHPVRPVTHTIKPGRSLIIGGGLARIDHKGASTQG 386
Query: 514 ----TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKV 569
++++ + S V+LH+ + A++ G + PP D + L ++V
Sbjct: 387 MHAQPVFLSCFVSNKVTLHVIDTKKAEDFLTRRKGTFMYPPHSAD--ARLPPLTKHNVEV 444
Query: 570 SGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLER 625
+ DI+ AGLGW ++ G LT+W +G+++ R P +L PF R
Sbjct: 445 YAPNPHTAMDDISIAGLGWITVYGYGHEELTVWVPEGVKV-FRRPAML---PFTIR 496
>gi|294955564|ref|XP_002788568.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239904109|gb|EER20364.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 574
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 167/356 (46%), Gaps = 45/356 (12%)
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP-SQVSP 351
+V+M+VD +DF+ S+ +L E+ L +++ V K+D +P +
Sbjct: 163 LVLMLVDILDFES--------SIVPELFESCRQKNL-----QVMFVINKIDGIPFYEKKK 209
Query: 352 TRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAG---PRGNVWVIGAQN 408
++ +W ++ + V LVS+ G L +++ PR ++++G N
Sbjct: 210 HQIRQWATRMSRQIKNAHWSDVVLVSSLNGTGFAELEDRMRQYLSADKPRW-IYIVGRVN 268
Query: 409 AGKSTLINTFAKKEGVK----------VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTP 458
GKST +N + + G +T +P+PGTT+ + G LP K +L D+P
Sbjct: 269 TGKSTFVNRWLRHIGYTHLGTVNYKRGTGGITRSPVPGTTMQFVTFG--LPRKFRLVDSP 326
Query: 459 GLLHPHLMSMRLN--RDEQKMVEIRKE-LQPRTYRVKGGQAVHVGG-LMRLDLDQASVE- 513
G+ +S L +D + R+ ++P T+ +K G+++ +GG L R+D AS +
Sbjct: 327 GIPSKVQLSSFLEDPKDLYDLSLCRQHPVRPVTHTIKPGRSLIIGGGLARIDHKGASTQG 386
Query: 514 ----TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKV 569
++++ + S V+LH+ + A++ G + PP D ++L ++V
Sbjct: 387 MHAQPVFLSCFVSNKVTLHVIDTKKAEDFLTRKKGTFMYPPHSAD--AKLPPLTKHNVEV 444
Query: 570 SGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLER 625
+ DI+ AGLGW ++ G LT+W +G+++ R P +L PF R
Sbjct: 445 YAPNPHTAMDDISIAGLGWITVYGYGHEELTVWVPEGVKV-FRRPAML---PFTIR 496
>gi|118359870|ref|XP_001013173.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89294940|gb|EAR92928.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 690
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 136/598 (22%), Positives = 237/598 (39%), Gaps = 138/598 (23%)
Query: 109 CPGCGIFMQDKDPNLPGYYKQKKDIERNEEFLEDEEGIENDIEGFEEDIV---DGNFDQS 165
C GCG+ Q + N GY D + +E ++ + I+ +IE DIV FD+S
Sbjct: 104 CTGCGVKFQIEHQNKLGYI----DKKVLKEIVDHNKRIDEEIEN--GDIVVKRSNQFDES 157
Query: 166 DGKESDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKK 225
D + + + + +F+ + +DLD+ EE+ SKK+
Sbjct: 158 DYISKYMIQNNKLQQLKNTDHK-QFI--EIEDLDM-------------LEEI--ESKKEN 199
Query: 226 LSKAERKKKAREAQKEKGEVTVCARCHSLR---NYGQVKNEVA----------------- 265
++ +RK+K + +K +C RCH L+ N ++E++
Sbjct: 200 MTVYKRKEKNLKYKK-----PICYRCHQLKYQKNLIDQQSEISRQNQQEQNQQSNLSDDE 254
Query: 266 ------ENLIPDFDFDRVIATR----LMKPSGN--ANAGVVVMVVDCVDFDGMFPKRAAK 313
E + DF+ ++AT+ +K + ++ VVD D
Sbjct: 255 NEDHQQELEMTDFEKGDLLATKDPSEFLKKAFKLVKRNSTIIFVVDATD----------- 303
Query: 314 SLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP-SQVSPTRLDRWVRH---RAKAGGAPK 369
LF L + D ++ K++L K+D LP + V +L V+
Sbjct: 304 -LFATLNTSIVDYAFAQN-HKIILAVNKIDALPPNNVQFNQLKSVVKKCILEKYPNNLHL 361
Query: 370 LNGVYLVSARKDLGVRNLLAFI-------KELAGPR--GNVWVIGAQNAGKSTLINTFAK 420
L + LVSA+ G+ + +I K+ R N +V+G N GKS+ IN +
Sbjct: 362 LEDIVLVSAKSGEGLEKITKYIISAKMESKQYQHSRYSKNFYVMGFANTGKSSFINALNR 421
Query: 421 KE--------------------------------GVKV------SKLTEAPIPGTTLGIL 442
+ G V +LT + IPGTT+ +
Sbjct: 422 QTKKLLKKQEDQQTNSNPENLNSQDKLMIKRLLGGTSVGGEEDDQELTTSSIPGTTVSFV 481
Query: 443 RIGGILPAKAKLYDTPGLLHPH-LMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGG 501
+ +YDTPG+ +PH L N + K++ I K++ P+ + + +V GG
Sbjct: 482 KSRN-KRLNVNIYDTPGIPNPHQLYHYFSNPTDAKIIVIDKKISPQVFTISKDLSVFFGG 540
Query: 502 LMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGT 561
L R+D Q + V+ S ++++H+ K A+E++ L P + D +
Sbjct: 541 LARIDQTQGI--DVNAAVFMSSHIAVHVTKSYKANEVFIKQYNNILVPVLNPDFTQII-- 596
Query: 562 WKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG----LKGEASLTLWTYDGIEITLREPL 615
++ + +S S D+ GLGW S KGEA L+ +G++ LRE
Sbjct: 597 FQRHVIDISFDSKGRCNQDLEIFGLGWLSFTSQKVCKGEAQFFLYLPEGVQYKLRESF 654
>gi|254303086|ref|ZP_04970444.1| possible GTP-binding protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323278|gb|EDK88528.1| possible GTP-binding protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 366
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 169/375 (45%), Gaps = 47/375 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ + N + D+ + + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----SVNKMTREDYKQEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L +K D+ +++ K+DL+P + P+ + WV+ R
Sbjct: 85 DVEILDILREK------DS---------IVIVNKLDLIPDEKHPSEVANWVKDRLAEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K+ VS
Sbjct: 130 APLD-IAIVSTKNGYGVNGVFRKIKHFYPEGVNAMVIGVTNVGKSSVINRLLGKKIATVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMS-MRLNRDEQKMVEIRKELQ 485
K PGTT I ++P LYDTPGL+ S + + QK++ E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLVCDNCAQKIIP-ASEIS 240
Query: 486 PRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+T++ K + + +G L++ L+ ++ I+ +++A+ +V H IE + E+ G
Sbjct: 241 RKTFKAKHNRMIMIGNLVKFKILNDDEIKPIF-SIYAAKDVQFHETTIEKSKEL---EAG 296
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
P + E +K KV+ T G ++ GL W S+ +G ++ +
Sbjct: 297 DFFSIPCDCCK-EEYNKYK----KVNKTLTINTGEELVFKGLAWVSVK-RGPLNIQITLP 350
Query: 605 DGIEITLREPLVLDR 619
+ IEI++R+ + R
Sbjct: 351 EEIEISIRKAFINPR 365
>gi|422338012|ref|ZP_16418972.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|355372650|gb|EHG19989.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 366
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 169/375 (45%), Gaps = 47/375 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ + N + D+ + + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----SVNKMTREDYKKEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L +K D+ +++ K+DL+P + P+ + WV+ R
Sbjct: 85 DVEILDILREK------DS---------IVIVNKLDLIPDEKHPSEVANWVKDRLAEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K+ VS
Sbjct: 130 APLD-IAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKKIATVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMS-MRLNRDEQKMVEIRKELQ 485
K PGTT I ++P LYDTPGL+ S + + QK++ E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLVCDNCAQKIIP-ASEIS 240
Query: 486 PRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+T++ K + + +G L++ L+ ++ I+ +++A+ +V H IE A E+ G
Sbjct: 241 RKTFKAKHNRMIMIGNLVKFKILNDDEIKPIF-SIYAAKDVQFHETTIEKAKEL---EAG 296
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
P D E ++ KV+ T G ++ GL W S+ +G ++ +
Sbjct: 297 NFFTIPC--DCCKE---EYNKHKKVNKTLTINTGEELVFKGLAWVSVK-RGPLNIQITLP 350
Query: 605 DGIEITLREPLVLDR 619
+ IEI++R+ + R
Sbjct: 351 EEIEISIRKAFINPR 365
>gi|359403271|ref|ZP_09196178.1| GTPase YqeH [Spiroplasma melliferum KC3]
gi|438118792|ref|ZP_20871437.1| GTP-binding protein YqeH [Spiroplasma melliferum IPMB4A]
gi|357968488|gb|EHJ90997.1| GTPase YqeH [Spiroplasma melliferum KC3]
gi|434155698|gb|ELL44628.1| GTP-binding protein YqeH [Spiroplasma melliferum IPMB4A]
Length = 358
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 164/371 (44%), Gaps = 47/371 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG-VVVMVVDCVDFDGM 306
C RC L +Y NE+ +P DF L K + + V+D D DG
Sbjct: 33 CYRCFRLTHY----NELVTYNVPAIDF-------LAKLRQDYHLNWHYFYVLDVYDLDG- 80
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
+ A LE+ + K++ L+ K+DL+ ++P ++ ++ +
Sbjct: 81 -TRELA------LEQLLQNNKVT-------LIINKIDLVNKLINPHKIITYISELFRTSV 126
Query: 367 A-PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
KL + LVS K+ G+ L +IK ++ +G+ N GKSTL+N+ K +
Sbjct: 127 LFSKLEDIILVSGLKNYGLDELWRYIKR---QTNDIVFVGSSNTGKSTLLNSLIKLTNQQ 183
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
K+T + TTL + + L + K+YDTPG+++ H + L + + M+ ++ L+
Sbjct: 184 -QKITVSNNLATTLDKIVVN--LGTRHKVYDTPGIMNKHSLLSYLAENNKNMIT-KQLLK 239
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
P T+++ Q + GL + + + + N+ LH K+ N D + +H+
Sbjct: 240 PITFQLNSEQTIFYEGLASFSYLTGLKTSFHF--YKNNNLKLHRTKLSNKDYYFTHHLS- 296
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
+ E W +R ++++ + + AGLGW S + + + T+
Sbjct: 297 --TTAVKLKNYQE---WTERVIEIN----EPGNYSLFIAGLGWISFKGQSGQKIMVGTHQ 347
Query: 606 GIEITLREPLV 616
I+ITLR+ +
Sbjct: 348 NIKITLRKQFI 358
>gi|262067703|ref|ZP_06027315.1| ribosome biogenesis GTPase YqeH [Fusobacterium periodonticum ATCC
33693]
gi|291378428|gb|EFE85946.1| ribosome biogenesis GTPase YqeH [Fusobacterium periodonticum ATCC
33693]
Length = 366
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 164/374 (43%), Gaps = 45/374 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ + N + D+ + + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----STNKMTREDYKKEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L +K D+ ++V K+DL+P + P+ + WV+ R
Sbjct: 85 DVEILDILREK------DS---------IVVVNKLDLIPDEKHPSEVANWVKDRLAEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K VS
Sbjct: 130 APLD-IAIVSTKNGYGVNGIFKKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKRIATVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
K PGTT I ++P LYDTPGL+ S L + + E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPKGRASDLLCDSCAQKIIPAGEISR 241
Query: 487 RTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
+T++ K + + + L+++ L+ V+ I+ ++A+ +V H IE A E+ + G
Sbjct: 242 KTFKAKYDRVIMIDNLVKIRILNDEEVKPIF-AIYAAKDVKFHETTIERAKELEE---GN 297
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
+ P R ++ K+S T G ++ GL W S+ +G + + +
Sbjct: 298 FFEIPCECCRDEY-----NKHKKISKTLTIKTGEELVFKGLAWVSVK-RGPLKIEVTLAE 351
Query: 606 GIEITLREPLVLDR 619
IEI++R+ + R
Sbjct: 352 EIEISIRKAFIKPR 365
>gi|294785358|ref|ZP_06750646.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_27]
gi|294487072|gb|EFG34434.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_27]
Length = 366
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 166/375 (44%), Gaps = 47/375 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ + N + D+ + + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----SVNKMTREDYKKEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L KD +++ K+DL+P + P+ + WV+ R
Sbjct: 85 DVEILDIL-----REKDS----------IVIVNKLDLIPDEKHPSEVANWVKDRLAEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K+ VS
Sbjct: 130 APLD-IAIVSTKNGYGVNGVFRKIKHFYPEGVNAMVIGVTNVGKSSVINRLLGKKIATVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMS-MRLNRDEQKMVEIRKELQ 485
K PGTT I ++P LYDTPGL+ S + + QK++ E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLVCDNCAQKIIP-SGEIS 240
Query: 486 PRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+T++ K + + +G L++ L+ ++ I+ +++A+ +V H IE A E+ G
Sbjct: 241 RKTFKAKYNRMIMIGNLVKFKILNNDEIKPIF-SIYAAKDVQFHETTIEKAKEL---EAG 296
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
P + ++ KV+ T G ++ GL W S+ +G ++ +
Sbjct: 297 NFFTIPCDCCKKEY-----NKHKKVNKTLTINTGEELVFKGLAWVSVK-RGPLNIQITLP 350
Query: 605 DGIEITLREPLVLDR 619
+ IEI++R+ + R
Sbjct: 351 EEIEISIRKAFINPR 365
>gi|34763137|ref|ZP_00144106.1| GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27887200|gb|EAA24302.1| GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 366
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 166/375 (44%), Gaps = 47/375 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ A N + D+ + + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----AVNKMTREDYKKEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L KD +++ K+DL+P + P+ + W++ R
Sbjct: 85 DVEILDIL-----REKDS----------IVIVNKLDLIPDEKHPSEVANWIKDRLAEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K+ VS
Sbjct: 130 VPLD-IAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKKIATVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMS-MRLNRDEQKMVEIRKELQ 485
K PGTT I ++P LYDTPGL+ S + + QK++ E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPDGRASDLVCDNCAQKIIP-SGEIS 240
Query: 486 PRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+T++ K + + +G L++ L+ ++ I+ +++A+ +V H IE A E+ G
Sbjct: 241 RKTFKAKYNRMIMIGNLVKFKILNNEEIKPIF-SIYAAKDVQFHETTIEKAKEL---EAG 296
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
P + ++ KV+ T G ++ GL W S+ +G ++ +
Sbjct: 297 NFFTIPCECCKEEY-----NKHKKVNKTLTINTGEELVFKGLAWVSVK-RGPLNIQITLP 350
Query: 605 DGIEITLREPLVLDR 619
+ IEI++R+ + R
Sbjct: 351 EEIEISIRKAFINPR 365
>gi|256845344|ref|ZP_05550802.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_36A2]
gi|256718903|gb|EEU32458.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_36A2]
Length = 366
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 166/375 (44%), Gaps = 47/375 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ + N + D+ + + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----SVNKMTREDYKQEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L KD +++ K+DL+P + P+ + WV+ R
Sbjct: 85 DVEILDIL-----REKDS----------IVIVNKLDLIPDEKHPSEVANWVKDRLAEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K+ VS
Sbjct: 130 APLD-IAIVSTKNGYGVNGVFRKIKHFYPEGVNAMVIGVTNVGKSSVINRLLGKKIATVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMS-MRLNRDEQKMVEIRKELQ 485
K PGTT I ++P LYDTPGL+ S + + QK++ E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLVCDNCAQKIIP-SGEIS 240
Query: 486 PRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+T++ K + + +G L++ L+ ++ I+ +++A+ +V H IE A E+ G
Sbjct: 241 RKTFKAKYNRMIMIGNLVKFKILNNEEIKPIF-SIYAAKDVQFHETTIEKAKEL---EAG 296
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
P + ++ KV+ T G ++ GL W S+ +G ++ +
Sbjct: 297 NFFTIPCECCKEEY-----NKHKKVNKTLTINTGEELVFKGLAWVSVK-RGPLNIQITLP 350
Query: 605 DGIEITLREPLVLDR 619
+ IEI++R+ + R
Sbjct: 351 EEIEISIRKAFINPR 365
>gi|340752873|ref|ZP_08689667.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 2_1_31]
gi|422316805|ref|ZP_16398183.1| ribosome biogenesis GTPase YqeH [Fusobacterium periodonticum D10]
gi|229422666|gb|EEO37713.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 2_1_31]
gi|404590606|gb|EKA92965.1| ribosome biogenesis GTPase YqeH [Fusobacterium periodonticum D10]
Length = 366
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 164/374 (43%), Gaps = 45/374 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ + N + D+ + + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----STNKMTREDYKKEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L +K D+ ++V K+DL+P + P+ + WV+ R
Sbjct: 85 DVEILDILREK------DS---------IVVVNKLDLIPDEKHPSEVANWVKDRLAEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K VS
Sbjct: 130 APLD-IAIVSTKNGYGVNGIFKKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKRIATVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
K PGTT I ++P LYDTPGL+ S L + + E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLLCDSCAQKIIPAGEISR 241
Query: 487 RTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
+T++ K + + + L+++ L+ V+ I+ ++A+ +V H IE A E+ + G
Sbjct: 242 KTFKAKYDRIIMIDNLVKIRVLNDEEVKPIF-AIYAAKDVKFHETTIERAKELEE---GN 297
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
P R ++ K++ T G ++ GLGW S+ +G + + +
Sbjct: 298 FFDIPCECCRDEY-----NKHKKITKTLTIKTGEELVFKGLGWVSVK-RGPLKIEVTLAE 351
Query: 606 GIEITLREPLVLDR 619
IEI++R+ + R
Sbjct: 352 EIEISIRKAFIKPR 365
>gi|358466528|ref|ZP_09176342.1| hypothetical protein HMPREF9093_00813 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357068959|gb|EHI78923.1| hypothetical protein HMPREF9093_00813 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 366
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 164/374 (43%), Gaps = 45/374 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ + N + D+ + + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----STNKMTREDYKKEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L +K D+ ++V K+DL+P + P+ + WV+ R
Sbjct: 85 DVEILDILREK------DS---------IVVVNKLDLIPDEKHPSEVANWVKDRLAEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K VS
Sbjct: 130 APLD-IAIVSTKNGYGVNGIFKKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKRIATVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
K PGTT I ++P LYDTPGL+ S L + + + E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLLCDNCAQKIIPAGEISR 241
Query: 487 RTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
+T++ K + + + L+++ L+ V+ I+ ++A+ +V H IE A E+ + G
Sbjct: 242 KTFKAKYDRVIMIDNLVKIRVLNDEEVKPIF-AIYAAKDVKFHETTIERAKELEE---GN 297
Query: 546 RLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD 605
P R ++ K+S T G ++ GL W S+ +G + + +
Sbjct: 298 FFDIPCECCRDEY-----NKHKKISKTLTIKTGEELVFKGLAWVSVK-RGPLKIEVTLAE 351
Query: 606 GIEITLREPLVLDR 619
IEI++R+ + R
Sbjct: 352 EIEISIRKAFIKPR 365
>gi|237742004|ref|ZP_04572485.1| GTP-binding protein [Fusobacterium sp. 4_1_13]
gi|229429652|gb|EEO39864.1| GTP-binding protein [Fusobacterium sp. 4_1_13]
Length = 366
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 165/376 (43%), Gaps = 49/376 (13%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ A N + D+ + + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----AVNKMTREDYKKEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L KD ++V K+DL+P + P+ + WV+ R
Sbjct: 85 DVEILDIL-----REKDS----------IVVVNKLDLIPDEKHPSEVANWVKDRLAEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K+ VS
Sbjct: 130 APLD-IAIVSTKNGYGVNGVFRKIKHFYPDGVNSMVIGVTNVGKSSVINRLLGKKIATVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMS-MRLNRDEQKMVEIRKELQ 485
K PGTT I ++P LYDTPGL+ S + + QK++ E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPDGRASDLVCDNCAQKIIP-SGEIS 240
Query: 486 PRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+T++ K + + +G L++ L+ ++ I+ +++A+ +V H IE A E+ G
Sbjct: 241 RKTFKAKYNRMIMIGNLVKFKILNNEEIKPIF-SIYAAKDVQFHETTIEKAKEL---EAG 296
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSLGLKGEASLTLWT 603
P E + K K +N G ++ GL W S+ +G ++ +
Sbjct: 297 NFFTIP------CECCKEEYNKHKKVNKILTINTGEELVFKGLAWVSVK-RGPLNIQITL 349
Query: 604 YDGIEITLREPLVLDR 619
+ IEI++R+ + R
Sbjct: 350 PEEIEISIRKAFINPR 365
>gi|83319349|ref|YP_424399.1| hypothetical protein MCAP_0424 [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|83283235|gb|ABC01167.1| GTP-binding conserved hypothetical protein [Mycoplasma capricolum
subsp. capricolum ATCC 27343]
Length = 367
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 163/393 (41%), Gaps = 37/393 (9%)
Query: 227 SKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPS 286
S + K + E C RC ++NY N++ ++ I D F I+T +
Sbjct: 9 SLLQTTNKFEQGYVNDSEHAYCLRCFKIKNY----NQLVDSEINDKQFINKISTLVKNNK 64
Query: 287 GNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP 346
N V+ D +F R + +E D K+ +LV K+D+LP
Sbjct: 65 NNNLVFYYVL-----DIFDLFGSRILE-----IENLIKDFKV-------ILVVNKIDILP 107
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ ++ + K + ++L SA K V LL K + + + IGA
Sbjct: 108 KSVKLEKIRNYINNIFKNSSLKNV-EIFLTSANKINLVEPLLN--KVIKNNKNQQYFIGA 164
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
N GKS+LIN + + + + + TTL + I L ++D+ G+ + +
Sbjct: 165 SNVGKSSLINKMLEINQL-IPSIVVSKFFNTTLDFIEIQ--LDKNTTIFDSAGVSRKNSI 221
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
+ +N+ Q +KE+Q TY++ ++ G+ D + + ++ + ++
Sbjct: 222 ANLMNKRFQSYCYFKKEIQQFTYQLTNNNSIFFSGVCWFDYISLNNQKTSFHIYTNKEIN 281
Query: 527 LHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL 586
LH +N W N+ L P I ++ +K K ++ N DI+ +GL
Sbjct: 282 LHRTNTKNVIRYWNNNRK-NLIPYISNSDQIQVYEFKFDKSHLN------NWYDISISGL 334
Query: 587 GWFSLGLKGEASLTLWT---YDGIEITLREPLV 616
GW + ++ E + + + ++L EPL+
Sbjct: 335 GWINFKVESEMIIKINIPSDQKTVLVSLNEPLI 367
>gi|148907645|gb|ABR16951.1| unknown [Picea sitchensis]
Length = 601
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 182/405 (44%), Gaps = 68/405 (16%)
Query: 226 LSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKP 285
L E KKK R+ + +C RC L ++G + V + + A +L +
Sbjct: 156 LETYELKKKHRQLRS-----VLCGRCR-LLSHGHMLTAVGGHGGYSGGKQFISAEQLREK 209
Query: 286 SGN--ANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVD 343
+ + ++V +VD VDF+G F R + L A +++V TKVD
Sbjct: 210 LSHLRHDKALIVKLVDIVDFNGSFLARV-----RDLVGAN----------PIIMVATKVD 254
Query: 344 LLPSQVSPTRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNV 401
LLP + + W+ +A KLN ++L S++ G +++ I++ R +V
Sbjct: 255 LLPKGTDLSVVGDWI---VEATMRKKLNVLSIHLTSSKSLSGFVGVVSEIQQQRKGR-DV 310
Query: 402 WVIGAQNAGKSTLIN----TFAKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAK 453
+V+G+ N GKS IN T A K+ V + K ++ +PGTTLG ++I + K
Sbjct: 311 YVLGSANVGKSAFINALLKTMALKDFVAAAARRYKPIQSAVPGTTLGPIQIDA-FHGEGK 369
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMV--------------EIRKELQPRTYRVK------- 492
LYDTPG+ H + ++ ++ ++ + KE Q Y K
Sbjct: 370 LYDTPGVHLHHRQAAVVHAEDLPLLAPQSRLKGITISIDALTKENQELFYTSKTTSCTVD 429
Query: 493 ---GGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQP 549
G ++ GG++R+D+ + + I + ++ V + + A+E + +G L+P
Sbjct: 430 NGLNGLSIFWGGIVRIDVVKVPLH-IRLIMYGPKGVQIKVVPTSEAEEFYHKELGGALKP 488
Query: 550 PIGQDRASELGTWKDRK---LKVSGTSWDVNGIDIAAAGLGWFSL 591
P G+D+A K +K+ S V DIA +GLGW ++
Sbjct: 489 PTGKDKAKNWPGLKGSHPIDVKMGNNSRPV--CDIAISGLGWIAI 531
>gi|302754142|ref|XP_002960495.1| hypothetical protein SELMODRAFT_164227 [Selaginella moellendorffii]
gi|300171434|gb|EFJ38034.1| hypothetical protein SELMODRAFT_164227 [Selaginella moellendorffii]
Length = 599
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 162/363 (44%), Gaps = 67/363 (18%)
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+V+ +VD VDF G F L +D L P +VLV TKVDLLP
Sbjct: 231 LVLKLVDIVDFSGSF-----------LTRVRD---LVGNNP-IVLVATKVDLLPEGTDLA 275
Query: 353 RLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRG--NVWVIGAQN 408
+ W+ ++ KLN V+L SA+ +G+ N+ +KE+ R +V+++GA N
Sbjct: 276 AVGDWI---VESTQRKKLNVISVHLTSAKYFMGITNI---VKEIHRERQGRDVYILGAAN 329
Query: 409 AGKSTLINTFAKKEG--------VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGL 460
GKS I++ K+ + K ++ +PGTT+G + I + +YDTPG+
Sbjct: 330 VGKSAFISSLLKEMAARDPIAAVARKRKPVQSVLPGTTVGPISIDA-FASGGSMYDTPGV 388
Query: 461 -LH------------PHLMSMRLNRDEQKMVEIRKELQP----RTYRVKGGQAVHVGGLM 503
LH P L R R E K+ + + G + GG+
Sbjct: 389 HLHHRIETAISPDDLPSLFPARRLRGYSIFSEALKQAEKDEVISNVQDLTGTTMFWGGIA 448
Query: 504 RLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWK 563
R+D+ +A T +T +AS + +H ADE +K +G L PP +RAS W
Sbjct: 449 RIDVLKAPQNT-RLTFYASAALRVHKVLTSEADEFYKRELGKTLVPP-SDERAS---AWP 503
Query: 564 --DRKLKVSGTSWDVNGI-DIAAAGLGWFSL-------GLKGEASLTLWTYDGIEITLRE 613
D + K + D + DIA +GLGW + G++ L ++ GIE+ R
Sbjct: 504 GLDHRNKFTFDYDDTRPVGDIAISGLGWMRMEFLQTESGVEDSLELEVYVPRGIEV-FRR 562
Query: 614 PLV 616
P +
Sbjct: 563 PAI 565
>gi|239616645|ref|YP_002939967.1| GTP-binding protein HSR1-related [Kosmotoga olearia TBF 19.5.1]
gi|239505476|gb|ACR78963.1| GTP-binding protein HSR1-related [Kosmotoga olearia TBF 19.5.1]
Length = 368
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 165/381 (43%), Gaps = 47/381 (12%)
Query: 237 EAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVM 296
E ++++G+ +C RC L++YG+ K E D + + + N V+
Sbjct: 27 ERRQKEGKEILCQRCFHLKHYGKFKKEKKGVKSLD------SLKKYLHLAKN-----VIY 75
Query: 297 VVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR 356
V+D DFDG + + + L K + V KVDL+P +V+P + +
Sbjct: 76 VIDIFDFDGTYREEIVELL---------------KEHNVYYVINKVDLVPKEVAPPEIKK 120
Query: 357 WVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN 416
W R R K V L+SA+ GV + F+K R V+G N GKS+++N
Sbjct: 121 WARDRLKVQST----RVKLLSAKVGRGVSGFVKFLKSKKDRR--FLVVGVTNVGKSSVLN 174
Query: 417 TFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQK 476
+ +LT + PGTTL ++++ L DTPG+ ++ L+ Q
Sbjct: 175 ALTGE-----GQLTASKYPGTTLELVQLKN-EDTGLTLIDTPGIFTNDRVTDLLDPWCQA 228
Query: 477 MVEIRKELQPRTYRVKGGQAVHVGGLMRLDLD-QASVETIYVTVWASPNVSLHLGKIENA 535
+ +K+L T K + V + + + + + S NV +H E A
Sbjct: 229 KIMPQKKLTVTTINAKKDRTVFFSSFVSITVKGYKGRRSPIFHILTSENVVVHETNPEKA 288
Query: 536 DEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKG 595
+E W G L PP G + + +++ +L++ G +I GLGW ++ +G
Sbjct: 289 EERWSEWFGRFLVPPCG-NSGFDNYKFENHQLRLEA------GQEIHICGLGWVNVA-RG 340
Query: 596 EASLTLWTYDGIEITLREPLV 616
A TL + ++ +R+ L+
Sbjct: 341 PAEFTLKLPESVKWVVRDALI 361
>gi|19704407|ref|NP_603969.1| GTP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|19714665|gb|AAL95268.1| GTP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
Length = 366
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 169/375 (45%), Gaps = 47/375 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ + N + D+ + + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----SVNKMTREDYKKEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L KD +++ K+DL+P + P+ + WV++R
Sbjct: 85 DVEILDIL-----REKDS----------IVIVNKLDLIPDEKHPSEVANWVKNRLAEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K+ VS
Sbjct: 130 VPLD-IAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKKIATVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMS-MRLNRDEQKMVEIRKELQ 485
K PGTT I ++P LYDTPGL+ S + + QK++ E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLVCDNCAQKIIP-SGEIS 240
Query: 486 PRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+T++ K + + +G L++ L+ ++ I+ +++A+ +V H IE + E+ +G
Sbjct: 241 RKTFKAKHNRMIMIGNLVKFKILNNDEIKPIF-SIYAAKDVQFHETTIEKSKEL---ELG 296
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
P D E ++ K++ T G ++ GL W S+ +G ++ +
Sbjct: 297 NFFTIPC--DCCKE---EYNKHKKINKTLTINTGEELVFKGLAWVSVK-RGPLNIQVTLP 350
Query: 605 DGIEITLREPLVLDR 619
+ IEI++R+ + R
Sbjct: 351 EEIEISVRKAFINPR 365
>gi|429327798|gb|AFZ79558.1| hypothetical protein BEWA_024070 [Babesia equi]
Length = 642
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 169/373 (45%), Gaps = 67/373 (17%)
Query: 294 VVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTR 353
+V ++D +D F + A + K+ AK K +L +V KVDLLP R
Sbjct: 287 IVYIMDVLDM--YFEEGLANLIIKRRALAK------KVSTRLYIVLNKVDLLPKH-RRKR 337
Query: 354 LDRWVRHRAKAGGAPKLN----GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNA 409
+ +V+ R AP+L ++L+SA+K + L+ + + A R ++ +GA N
Sbjct: 338 IMEYVQ-RFINNKAPQLRVKTRDIFLLSAKKGAAINLFLSVLLKNAR-RTRIFFVGATNV 395
Query: 410 GKSTLINTFAKKEG------------VKVS--------------KLTEAP-------IPG 436
GKSTL+N A G + VS KL E P +PG
Sbjct: 396 GKSTLLNCIANFTGGETKKIHNIASLMTVSGEGTNETDSRGKKKKLQEPPNILSTSIVPG 455
Query: 437 TTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP-RTYRVKGGQ 495
TTL ++ I KL+DTPG++ P ++ L E K+V + L P + +R++GG
Sbjct: 456 TTLSVMHINT--GTGLKLFDTPGIVLPGSLTSYLTASELKLV-VPSSLGPLKPHRLRGGY 512
Query: 496 AVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADE-IWKNHVG-IRL---QPP 550
+ +G +R+D+ + + ++AS + + K ++ + N G +RL P
Sbjct: 513 TILLGPFVRIDIVRG--RPFFFNIFASKRIKVVTKKTFKVEKFLHTNPFGDVRLFYGVEP 570
Query: 551 IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEIT 610
+ R + R++K+ G WD DI GLG+ +LG L + T + +
Sbjct: 571 LENSRMA-------RRMKILGAGWDRATTDICIQGLGFVTLGGALGLELLVETLPEVTVH 623
Query: 611 LREPLV-LDRAPF 622
+REPL+ D PF
Sbjct: 624 MREPLMPFDVIPF 636
>gi|422940271|ref|ZP_16967611.1| ribosome biogenesis protein GTPase YqeH [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
gi|339889924|gb|EGQ79133.1| ribosome biogenesis protein GTPase YqeH [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
Length = 366
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 166/375 (44%), Gaps = 47/375 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ + N + D+ + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----SVNKMTREDYRNEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L KD ++V K+DL+P + P+ + WV+ R
Sbjct: 85 DVEILDIL-----REKDS----------IVVVNKLDLIPDEKHPSEVANWVKDRLAEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K+ VS
Sbjct: 130 LPLD-IAIVSTKNGYGVNGIFRKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKKIATVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMS-MRLNRDEQKMVEIRKELQ 485
K PGTT I ++P LYDTPGL+ S + + QK++ E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLVCDNCAQKIIP-SGEIS 240
Query: 486 PRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+T++ K + + +G L++ L+ ++ I+ +++A+ +V H IE A E+ VG
Sbjct: 241 RKTFKAKYNRMIMIGNLVKFKILNNEEIKPIF-SIYAAKDVQFHETTIEKAREL---EVG 296
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
P + ++ KV+ T G ++ GL W S+ +G ++ +
Sbjct: 297 NFFTIPCECCKEEY-----NKHKKVNKTLTINTGEELVFKGLAWVSVK-RGPLNIQITLP 350
Query: 605 DGIEITLREPLVLDR 619
+ I+I++R+ + R
Sbjct: 351 EEIDISIRKAFISPR 365
>gi|339498294|ref|ZP_08659270.1| GTPase YqeH [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 209
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 400 NVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPG 459
+V+V+G N GKSTLIN K + +T + PGTTL RI L +L DTPG
Sbjct: 12 DVFVVGVTNVGKSTLINQIIKSRTGIQNLITTSRFPGTTLD--RIEIPLEDGQQLIDTPG 69
Query: 460 LLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTV 519
++ M+ L + K + E++PRTY++ Q + +GGL R D + I T
Sbjct: 70 IIKRDQMAHVLTDKDLKFALPKNEIKPRTYQLNPEQTIFIGGLARFDFISGARSAI--TA 127
Query: 520 WASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGI 579
+ N++LH K+ AD+ ++ H G L P S+L + ++ S
Sbjct: 128 YFENNLNLHRTKLIGADDFYEQHAGGLLVPA-----PSQLQNLIKHEFSITEDS------ 176
Query: 580 DIAAAGLGWFSL--GLKGEASLTLWTYDGIEITLR 612
DI +GLGW S+ G+K + W G+ + +R
Sbjct: 177 DIVFSGLGWISVPAGIK----VAGWAPKGVSVLIR 207
>gi|237744888|ref|ZP_04575369.1| GTP-binding protein [Fusobacterium sp. 7_1]
gi|336400671|ref|ZP_08581444.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 21_1A]
gi|229432117|gb|EEO42329.1| GTP-binding protein [Fusobacterium sp. 7_1]
gi|336161696|gb|EGN64687.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 21_1A]
Length = 366
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 166/375 (44%), Gaps = 47/375 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ + N + D+ + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----SVNKMTREDYRNEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L KD ++V K+DL+P + P+ + WV+ R
Sbjct: 85 DVEILDIL-----REKDS----------IVVVNKLDLIPDEKHPSEVANWVKDRLVEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K+ VS
Sbjct: 130 LPLD-IAIVSTKNGYGVNGIFRKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKKIATVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMS-MRLNRDEQKMVEIRKELQ 485
K PGTT I ++P LYDTPGL+ S + + QK++ E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLVCDNCAQKIIP-SGEIS 240
Query: 486 PRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+T++ K + + +G L++ L+ ++ I+ +++A+ +V H IE A E+ VG
Sbjct: 241 RKTFKAKYNRMIMIGNLVKFKILNNEEIKPIF-SIYAAKDVQFHETTIEKAREL---EVG 296
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
P + ++ KV+ T G ++ GL W S+ +G ++ +
Sbjct: 297 NFFTIPCECCKEEY-----NKHKKVNKTLTINTGEELVFKGLAWVSVK-RGPLNIQITLP 350
Query: 605 DGIEITLREPLVLDR 619
+ I+I++R+ + R
Sbjct: 351 EEIDISIRKAFISPR 365
>gi|296328240|ref|ZP_06870770.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154640|gb|EFG95427.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 366
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 168/375 (44%), Gaps = 47/375 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ + N + D+ + + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----SVNKMTREDYKKEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L KD +++ K+DL+P + P+ + WV++R
Sbjct: 85 DVEILDIL-----REKDS----------IVIVNKLDLIPDEKHPSEVANWVKNRLAEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K+ VS
Sbjct: 130 VPLD-IAIVSTKNGYGVNGVFRKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKKIATVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMS-MRLNRDEQKMVEIRKELQ 485
K PGTT I ++P LYDTPGL+ S + + QK++ E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLVCDNCAQKIIP-SGEIS 240
Query: 486 PRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+T++ K + + +G L++ L+ ++ I+ +++A+ V H IE + E+ +G
Sbjct: 241 RKTFKAKHNRMIMIGNLVKFKILNNDEIKPIF-SIYAAKGVQFHETTIEKSKEL---ELG 296
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
P D E ++ K++ T G ++ GL W S+ +G ++ +
Sbjct: 297 NFFTIPC--DCCKE---EYNKHKKINKTLTINTGEELVFKGLAWVSVK-RGPLNIQVTLP 350
Query: 605 DGIEITLREPLVLDR 619
+ IEI++R+ + R
Sbjct: 351 EEIEISVRKAFINPR 365
>gi|302767618|ref|XP_002967229.1| hypothetical protein SELMODRAFT_87746 [Selaginella moellendorffii]
gi|300165220|gb|EFJ31828.1| hypothetical protein SELMODRAFT_87746 [Selaginella moellendorffii]
Length = 599
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 162/363 (44%), Gaps = 67/363 (18%)
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+V+ +VD VDF G F L +D L P +VLV TKVDLLP
Sbjct: 231 LVLKLVDIVDFSGSF-----------LTRIRD---LVGNNP-IVLVATKVDLLPEGTDLA 275
Query: 353 RLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRG--NVWVIGAQN 408
+ W+ ++ KLN V+L SA+ +G+ N+ +KE+ R +V+++GA N
Sbjct: 276 AVGDWI---VESTQRKKLNVISVHLTSAKYFMGITNI---VKEIHRERQGRDVYILGAAN 329
Query: 409 AGKSTLINTFAKKEG--------VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGL 460
GKS I++ K+ + K ++ +PGTT+G + I + +YDTPG+
Sbjct: 330 VGKSAFISSLLKEMAARDPIAAVARKRKPVQSVLPGTTVGPISIDA-FASGGSMYDTPGV 388
Query: 461 -LH------------PHLMSMRLNRDEQKMVEIRKELQP----RTYRVKGGQAVHVGGLM 503
LH P L R R E K+ + + G + GG+
Sbjct: 389 HLHHRIETAISPDDLPSLFPARRLRGYSIFSEALKQAEKDEVISNVQDLTGTTMFWGGIA 448
Query: 504 RLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWK 563
R+D+ +A T +T +AS + +H ADE +K +G L PP +RAS W
Sbjct: 449 RIDVLKAPQNT-RLTFYASAALRVHKVLTSEADEFYKRELGKTLVPP-SDERAS---AWP 503
Query: 564 --DRKLKVSGTSWDVNGI-DIAAAGLGWFSL-------GLKGEASLTLWTYDGIEITLRE 613
D + K + D + DIA +GLGW + G++ L ++ GIE+ R
Sbjct: 504 GLDHRNKFTFDYDDTRPVGDIAISGLGWMKMEFLQTESGVEDCLELEVYVPRGIEV-FRR 562
Query: 614 PLV 616
P +
Sbjct: 563 PAI 565
>gi|399219162|emb|CCF76049.1| unnamed protein product [Babesia microti strain RI]
Length = 569
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 162/362 (44%), Gaps = 49/362 (13%)
Query: 294 VVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLS------KKLPKLVLVGTKVDLLPS 347
+V ++D +D KR + + E K+S KL +V K+DL+P
Sbjct: 209 IVYIMDALDL--YLDKRVVDFVVNRRREISKRVKMSDGDQTLSKLTLFYIVVNKIDLVPY 266
Query: 348 QVSPTRLDRWVRH-----RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP-RGNV 401
S R+ +V + G P+ ++L ++ GV + + A R V
Sbjct: 267 D-SRKRILCYVHKLFNDVHKELGLKPR--HIFLTNSLTGNGVNLFYSVVLHSAEILRSKV 323
Query: 402 WVIGAQNAGKSTLINTFAK-----KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
+ IG N+GKSTL+N AK K V ++L + PGTTL ++I + K +LYD
Sbjct: 324 YFIGYANSGKSTLLNWLAKFASDTKSPVSPNRLATSIFPGTTLRPVKID--IGKKYELYD 381
Query: 457 TPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGG-------QAVHVGGLMRLDLDQ 509
TPG+L + ++ L+ D + +K P +RVK G +++ +G +R+DL+
Sbjct: 382 TPGILLTNSITSHLSVDNIPIAIPKKHKAPMIHRVKDGKLYNYLGESLLLGPFVRIDLED 441
Query: 510 ASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKD----- 564
+ + + T + S N+ + + + + R+ P D++ K+
Sbjct: 442 S--KPYFFTPFISGNIPVRVASRKRLYISKEAQDLSRMYPVYEYDQSGNKIVHKNSKVPP 499
Query: 565 -----------RKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLRE 613
+K K+ G W +DI GLG+ ++ +A++ ++T+ +EITLRE
Sbjct: 500 EMEDEEKMLVPKKFKIIGRGWKTATVDICIRGLGFVAVAGALKATIKVYTHPDVEITLRE 559
Query: 614 PL 615
+
Sbjct: 560 SM 561
>gi|156085495|ref|XP_001610157.1| membrane protein [Babesia bovis T2Bo]
gi|154797409|gb|EDO06589.1| membrane protein, putative [Babesia bovis]
Length = 677
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 181/429 (42%), Gaps = 58/429 (13%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVD 299
+E G C RC S+ + G + N + D +++ + + NA V VV
Sbjct: 251 RESGGHARCRRCSSMSS-GLIFNNSDIAVGADATDAARETVAIIRNALSLNATRNVTVVY 309
Query: 300 CVD-FDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWV 358
+D D F A+ + + + D+ +V KVDLLP S RL +V
Sbjct: 310 MLDALDIHFEDGLAELIASRRAQRTSDSHF-------YIVLNKVDLLPPH-SRKRLIAYV 361
Query: 359 RHRAKAGGAPKL----NGVYLVSARKDLGVRNLLAFIKELA-GPRGNVWVIGAQNAGKST 413
HR AP L ++L+S+R GV L+ + + A R ++ +GA N GKST
Sbjct: 362 -HRYVKSRAPDLGLKPRHIFLLSSRTGSGVNLFLSVLLDDAYRRRSKIFFVGATNTGKST 420
Query: 414 LINTFA--------KKEGVKVSK---LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLH 462
IN + +K + SK L+ + +PGTTL LRI ++YDTPG++
Sbjct: 421 FINRLSNLVSCSDERKSDIAASKRALLSTSVVPGTTLRPLRID--TGPGFEMYDTPGIVV 478
Query: 463 PHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQAS--------VET 514
P+ + L DE KM + RV G ++ +G +R+D+ + +
Sbjct: 479 PNAFTSYLTPDELKMAVPASLGAAKPLRVACGSSLLIGPFVRIDVTKGRPWFFTPYFSKR 538
Query: 515 IYVTVWASPNVSLHLGK-----------------IENADEIWKNHVGIRLQPPIGQDRAS 557
+ V V + ++ L K I +DE + L+ + R
Sbjct: 539 VKVAVVRTNRIAQFLSKSPFGDARIFYGTECEDGILTSDESNTSDREGPLEGSVDDIRKH 598
Query: 558 ELGTWKD---RKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREP 614
L D ++ V G+ WD D+ GLG+ +L E S+ + T G+ + +REP
Sbjct: 599 VLPNRVDTTRHQVNVVGSGWDHATSDLCFKGLGFIALAGALELSICIETCSGVGVYMREP 658
Query: 615 LV-LDRAPF 622
L+ D PF
Sbjct: 659 LMPFDAIPF 667
>gi|50365167|ref|YP_053592.1| GTPase [Mesoplasma florum L1]
gi|50363723|gb|AAT75708.1| predicted GTPase [Mesoplasma florum L1]
Length = 365
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 168/382 (43%), Gaps = 47/382 (12%)
Query: 242 KGEVTVCARCHSLRNYGQVKNEV--AENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVD 299
K E C RC ++NY ++ N+ AE I + + + + ++D
Sbjct: 24 KPENEYCLRCFKIKNYNELINQEINAEQFI--------LKLKTLIQNDKPKDIEFFYIID 75
Query: 300 CVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
D +G S K++EEA K+ P ++V K+DLLP V ++ R++
Sbjct: 76 IFDLEG--------SRVKEIEEA------IKRYPVTIVVN-KIDLLPKAVKLAKIRRYIT 120
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
N + S + + + + ++ + + IG+ N GKS++IN+
Sbjct: 121 DLFAKSAIYDANIILNTSFKNNFTN----SLLNKIKKTKTKKYFIGSSNVGKSSIINSLL 176
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
+ + + ++ E+ TTL ++I L + ++DTPG+ + + L++++ K +
Sbjct: 177 RTNNL-IPQIVESKYFNTTLDFIQIK--LSSDDIIFDTPGIARSNSAANLLDKEDWKYIY 233
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENA-DEI 538
KE+ T+++K ++ G+ +D + S E + + + LH +NA D
Sbjct: 234 FNKEVAQNTFQLKPFNSIFYAGIAWVDFEWESDEINSFHFFNNKEIKLHRTNTKNAFDYY 293
Query: 539 WKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNG-IDIAAAGLGWFSLGLKGEA 597
+N I P D + R+ + D+N +I+ +GLGWF+ +K
Sbjct: 294 TRNKENI---VPYNLD-----NNFVKREFIFNEK--DINKEFEISISGLGWFNFKVKNPM 343
Query: 598 SLTL---WTYDGIEITLREPLV 616
+T+ + +E TLR+PLV
Sbjct: 344 KVTINIPTSNVEVETTLRKPLV 365
>gi|336417944|ref|ZP_08598224.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 11_3_2]
gi|336160876|gb|EGN63904.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 11_3_2]
Length = 366
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 165/375 (44%), Gaps = 47/375 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ + N + D+ + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----SVNKMTREDYRNEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L KD ++V K+DL+P + P+ + WV+ R
Sbjct: 85 DVEILDIL-----REKDS----------IVVVNKLDLIPDEKHPSEVANWVKDRLAEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K+ VS
Sbjct: 130 LPLD-IAIVSTKNGYGVNGIFRKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKKIATVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMS-MRLNRDEQKMVEIRKELQ 485
K PGTT I ++P LYDTPGL+ S + + QK++ E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLVCDNCAQKIIP-SGEIS 240
Query: 486 PRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+T++ K + + +G L++ L+ ++ I+ +++A+ +V H IE A E+ G
Sbjct: 241 RKTFKAKYNRMIMIGNLVKFKILNNEEIKPIF-SIYAAKDVQFHETTIEKAREL---EAG 296
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
P + ++ KV+ T G ++ GL W S+ +G ++ +
Sbjct: 297 NFFTIPCECCKEEY-----NKHKKVNKTLTINTGEELVFKGLAWVSVK-RGPLNIQITLP 350
Query: 605 DGIEITLREPLVLDR 619
+ I+I++R+ + R
Sbjct: 351 EEIDISIRKAFISPR 365
>gi|269120434|ref|YP_003308611.1| GTP-binding protein HSR1-like protein [Sebaldella termitidis ATCC
33386]
gi|268614312|gb|ACZ08680.1| GTP-binding protein HSR1-related protein [Sebaldella termitidis
ATCC 33386]
Length = 379
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 168/377 (44%), Gaps = 48/377 (12%)
Query: 243 GEVTVCARCHSLRNYGQVKN-EVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCV 301
G +C RC+ +++YG+ ++ E+ + D+ + + + K + +++ + D +
Sbjct: 32 GTDILCQRCYRIKHYGKHQDIELTKE-----DYKKEVEDAVKK------SDIILAIFDII 80
Query: 302 DFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR 361
DF+G F + L ++ +V++ K+DLLP + P+ + WV+ R
Sbjct: 81 DFEGSFSEEILDFL--------------REYNSIVMIN-KIDLLPKTIHPSEISDWVKGR 125
Query: 362 AKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK 421
+ G + + L+S + GV +L IK V+G N GKS+ +N+ +K
Sbjct: 126 LEEEGIVPYD-IALMSTKTKYGVNGVLRKIKSFK-ENATAVVLGVTNTGKSSFMNSLMEK 183
Query: 422 EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIR 481
+ +SK PGTTL ++ I K+ DTPGL+ +S L E +
Sbjct: 184 DKSTISKY-----PGTTLKSIK-NKIDGTDIKIIDTPGLIPEKRISDLLEPKEALALVPN 237
Query: 482 KELQPRTYRVKGGQAVHVGGLM--RLDLDQASVETIYVTVWASPNVSLHLGKIENADEIW 539
E+ +T++ Q GLM R+ +++ I+ + +A+ ++ H+ K + +++
Sbjct: 238 GEINRKTFKPDNNQVFFFDGLMWFRVIVEEDEKSPIF-SAFAAKDIKFHVTKKDRVEDLL 296
Query: 540 KNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASL 599
P ++ + K L V ++A +GLGW ++ +G +
Sbjct: 297 NKDF---FTFPSKTEKDAYYQKMKKETLTVEAFE------EMAISGLGWINVK-RGPLKI 346
Query: 600 TLWTYDGIEITLREPLV 616
L + ++I +R ++
Sbjct: 347 ELSYPENVKIVIRNGII 363
>gi|260494669|ref|ZP_05814799.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_33]
gi|289764610|ref|ZP_06523988.1| GTP-binding protein [Fusobacterium sp. D11]
gi|423136368|ref|ZP_17124011.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
animalis F0419]
gi|260197831|gb|EEW95348.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 3_1_33]
gi|289716165|gb|EFD80177.1| GTP-binding protein [Fusobacterium sp. D11]
gi|371961522|gb|EHO79146.1| ribosome biogenesis GTPase YqeH [Fusobacterium nucleatum subsp.
animalis F0419]
Length = 366
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 165/375 (44%), Gaps = 47/375 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L++YG+ + N + D+ + L + +V+ V D +DF+G F
Sbjct: 35 CQRCFQLKHYGKY----SVNKMTREDYRNEVGKLL------DDVKLVIAVFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
L KD ++V K+DL+P + P+ + WV+ R
Sbjct: 85 DVEILDIL-----REKDS----------IVVVNKLDLIPDEKHPSEVANWVKDRLVEESI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + GV + IK N VIG N GKS++IN K+ VS
Sbjct: 130 LPLD-IAIVSTKNGYGVNGIFRKIKHFYPDGVNAMVIGVTNVGKSSVINRLLGKKIATVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMS-MRLNRDEQKMVEIRKELQ 485
K PGTT I ++P LYDTPGL+ S + + QK++ E+
Sbjct: 189 KY-----PGTT--IKNTLNMIPFTNIGLYDTPGLIPEGRASDLVCDNCAQKIIP-SGEIS 240
Query: 486 PRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+T++ K + + +G L++ L+ ++ I+ +++A+ +V H IE A E+ G
Sbjct: 241 RKTFKAKYNRMIMIGNLVKFKILNNEEIKPIF-SIYAAKDVQFHETTIEKAREL---EAG 296
Query: 545 IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
P + ++ KV+ T G ++ GL W S+ +G ++ +
Sbjct: 297 NFFTIPCECCKEEY-----NKHKKVNKTLTINTGEELVFKGLAWVSVK-RGPLNIQITLP 350
Query: 605 DGIEITLREPLVLDR 619
+ I+I++R+ + R
Sbjct: 351 EEIDISIRKAFISPR 365
>gi|433450833|ref|ZP_20412689.1| ribosome biogenesis GTPase YqeH [Mycoplasma sp. G5847]
gi|431933780|gb|ELK20339.1| ribosome biogenesis GTPase YqeH [Mycoplasma sp. G5847]
Length = 367
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 163/381 (42%), Gaps = 46/381 (12%)
Query: 227 SKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPS 286
S + K + E C RC ++NY N++ ++ I D F I+T L+K +
Sbjct: 9 SLLQTTNKLEQGYVNDTEHAYCLRCFKIKNY----NQLVDSEINDEQFINKIST-LVKEN 63
Query: 287 GNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP 346
+ N V V+D D G S ++E D ++ +LV K+DLLP
Sbjct: 64 ED-NHLVFYYVLDIFDLFG--------SRILEIENLIKDFQV-------ILVVNKIDLLP 107
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNG--VYLVSARKDLGVRNLLAFIKELAGPRGNVWVI 404
+ ++ ++ + K LN ++L SA K V LL K + + + I
Sbjct: 108 KSIKLEKIRNYINNVFKTSS---LNDPEIFLTSANKLNLVEPLLN--KVIKNNKYQQYFI 162
Query: 405 GAQNAGKSTLINTFAKKEGVKVSKLTEAPIP----GTTLGILRIGGILPAKAKLYDTPGL 460
GA N GKS+LIN + ++++KL + + TTL + I L ++D+ G+
Sbjct: 163 GASNVGKSSLIN-----KMLEINKLIPSIVVSKYFNTTLDFIEIQ--LDKNTTIFDSAGV 215
Query: 461 LHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVW 520
+ ++ +N+ Q +KE+ TY++ ++ G+ D S + ++
Sbjct: 216 SRKNSIANLMNKRFQNYCYFKKEIHQFTYQLANNNSIFFSGVCWFDYLSFSNKKTNFHIY 275
Query: 521 ASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGID 580
+ ++LH +N W N+ L P I ++ +K ++ N D
Sbjct: 276 TNKEINLHRTNTKNVTRYWNNNRK-SLIPYINNSENVQVYEFKFTNEHLN------NWYD 328
Query: 581 IAAAGLGWFSLGLKGEASLTL 601
I+ +GLGW + ++ E + +
Sbjct: 329 ISISGLGWINFKVESEMMIRI 349
>gi|315917028|ref|ZP_07913268.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563]
gi|313690903|gb|EFS27738.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563]
Length = 362
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 134/288 (46%), Gaps = 32/288 (11%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC + +YG E + + + D+ + + + + P A A V D +DF+G F
Sbjct: 35 CQRCFRVSHYG----EHSSSFLSREDYQKELQ-QWVSPKRLALA-----VFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
D + +++ +V++ KVDL+P + P+ + WV+ R + G
Sbjct: 85 --------------QDDILDILREMDSIVVI-NKVDLIPGEKHPSEVANWVKGRLASEGI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + + G+ +L I+ V V+G N GKS++IN K V VS
Sbjct: 130 SPLD-IAIVSCKNNYGMNGVLRKIQHFYPNGVEVLVLGVTNVGKSSVINRLLGKNRVTVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
K PGTTL + + IL K L DTPGL+ S + ++Q V E+ +
Sbjct: 189 KY-----PGTTL-LSTMNEILGTKLCLIDTPGLIPEGRFSDLMIEEDQLRVIPSTEISRK 242
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENA 535
T++++ + + +G ++L + + +++AS V H +E A
Sbjct: 243 TFKLEKDRCIVLGEFVKLRVLNEEEQRPIFSLYASQGVQFHETSLEKA 290
>gi|281203403|gb|EFA77603.1| hypothetical protein PPL_12209 [Polysphondylium pallidum PN500]
Length = 565
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 117/515 (22%), Positives = 194/515 (37%), Gaps = 160/515 (31%)
Query: 109 CPGCGIFMQDKDPNLPGYYKQKKDIERNEEFLEDEEGIENDIEGFEEDIVDGNFDQSDGK 168
C GCG +Q PN GY + I +++ N SD
Sbjct: 143 CTGCGCSLQCDHPNQLGYIPKSVAIRY---------------------LLNKNKKPSDTT 181
Query: 169 ESDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSK 228
SD+ + D +D+ K E+E + + F+ V+ KK +++
Sbjct: 182 TSDTSEDDYYDEEYEK--YRKLTIEEEAKRNFENFS-------------VKNGSKKNMNE 226
Query: 229 AERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGN 288
E C RCH L++YG+ V IP +F ++ P +
Sbjct: 227 KE----------------TCQRCHMLKHYGK----VVPIKIPVEEFRHKLS-----PIKD 261
Query: 289 ANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ 348
N VVV VVD +DF G F + F+K+ ++LVG K+D+LP+
Sbjct: 262 MNC-VVVKVVDIMDFHGTFVEN-----FRKIIGNN----------PVILVGNKMDVLPAD 305
Query: 349 VSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQN 408
+ R++ W+R K G + L SA +D G+ + +++L R +V+V+G N
Sbjct: 306 IHRNRIEDWLRRECKLRGMVVSHVTLLSSASRD-GIAKFIVELEKLRRGR-DVFVVGCSN 363
Query: 409 AGKSTLINTFAKKEGVKV-------------------------SKLTEAPIPGTTLGILR 443
GKST +N + KV + T + PGTTL I+
Sbjct: 364 VGKSTFLNALVDEYREKVIFNENEQGNSGSSNNNNNQAKPSALERATTSIFPGTTLNIIS 423
Query: 444 IGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLM 503
+ P +K ++ +GGL
Sbjct: 424 V----PLWSK------------------------------------------SIFLGGLA 437
Query: 504 RLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDR-------A 556
R+D Q + T TV+ S ++ +H+ K E AD +++ G L PP+ +D+ +
Sbjct: 438 RIDY-QGGLATF--TVYVSNHLPVHICKTEKADALFERQRGKLLSPPLTEDQDRFDNDES 494
Query: 557 SELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+L K + + DI +GLGW ++
Sbjct: 495 IKLTQVKRFTITPEKIDFKHTHSDIVISGLGWIAI 529
>gi|282851350|ref|ZP_06260715.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
gi|282557318|gb|EFB62915.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
Length = 213
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 16/229 (6%)
Query: 388 LAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGI 447
+AF+ + G + +++ +G N GKSTLIN +T + PGTTL ++I
Sbjct: 1 MAFLAK-KGEKKDIYFVGTTNVGKSTLINAIINMNSDLKDVITTSKFPGTTLDEIKIP-- 57
Query: 448 LPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDL 507
L L DTPG+L+ + ++ L+ E ++VE +K L+P TY++ GQ + + GL R D
Sbjct: 58 LSNGHYLIDTPGILNANQLASHLSGKELEVVEPKKPLKPATYQLLPGQTIFLAGLGRFDY 117
Query: 508 DQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKL 567
T++ + ++ +H K ENAD ++ H L PP D LG K +
Sbjct: 118 VDGPSSGF--TIYVARDLYVHRTKTENADTFYEKHKDDLLLPPSKDDC---LGPLKGQTF 172
Query: 568 KVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
S DI G+G+ + + +T +GI + +R L+
Sbjct: 173 SPKEKS------DILFGGVGFIT--TPANVVVKAYTPEGIGLGIRRALI 213
>gi|373497682|ref|ZP_09588204.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 12_1B]
gi|371962822|gb|EHO80399.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. 12_1B]
Length = 370
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 154/348 (44%), Gaps = 45/348 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC ++NYG+ + L D D+ + + + + + V V D +DF+G F
Sbjct: 36 CQRCFKIKNYGKY---MPVRLNKD-DYRKEVQEAMQ------YSKLAVAVFDIIDFEGSF 85
Query: 308 PKRAAKSLFKKLEEAKDDAKLS--KKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
DD L +++ +V++ K+DL+P P+ + WV+ R
Sbjct: 86 ----------------DDEILDVLREMDSIVVI-NKLDLIPDDKHPSEVSDWVKDRLAEE 128
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G L+ + +VS++ G+ + IK V+G N GKS+++N + V
Sbjct: 129 GIAPLD-IAIVSSKNGYGINGIFKKIKHFYPDGVEAIVLGVTNVGKSSIVNRLLGAKKVT 187
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
VSK PGTTL ++ I L DTPGL+ +S + + + E+
Sbjct: 188 VSKY-----PGTTLKSVK-NQIPHTNIVLVDTPGLIPEGRISNLVCEECNLKMVPSGEIS 241
Query: 486 PRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGI 545
+T++VK G+A+ +G L+ + +++A+ +V+ H E E+ +
Sbjct: 242 RKTFKVKKGRALLIGELLWFRVLNEDDTMPIFSLYAAKDVTFHETNTERLKELLASGRKD 301
Query: 546 RLQPPI--GQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
L PP +D+ +L K +K+KV G ++ GLGW S+
Sbjct: 302 LLYPPCDNCRDQYKKLEMIK-KKIKVQA------GEELVFKGLGWISV 342
>gi|160902307|ref|YP_001567888.1| hypothetical protein Pmob_0841 [Petrotoga mobilis SJ95]
gi|160359951|gb|ABX31565.1| conserved hypothetical protein [Petrotoga mobilis SJ95]
Length = 365
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 149/354 (42%), Gaps = 50/354 (14%)
Query: 243 GEVTVCARCHSLRNYGQVKNEVAENLIPDF--DFDRVIATRLMKPSGNANAGVVVMVVDC 300
E VC RC L++Y + + + DF + D+V+ + V+ VVD
Sbjct: 33 NESVVCQRCFKLKHYNYL---LPITINSDFSGELDKVLK----------DFETVLWVVDV 79
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
+DF+G F K A+ + K + L+ K+DLLP +L W+
Sbjct: 80 IDFEGTFRKEIAEKI---------------KGKNIFLIVNKIDLLPKSTPYEKLKNWLLL 124
Query: 361 RAKAGGAP-KLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
R K G + + V +VS + +G+ + L + V+G N GKS+ +N
Sbjct: 125 RIKEMGINIRDDHVRMVSVKTGMGIEKTKQLL--LQKEKEKALVLGVTNVGKSSFLNRLV 182
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVE 479
+ E +T + GTTL +L+ + +L+DTPG+ + + Q +
Sbjct: 183 EAE------ITVSAYSGTTLKVLK-ANVPNTDLQLFDTPGIFTQDRLCDFFDIYTQVKMI 235
Query: 480 IRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETI--YVTVWASPNVSLHLGKIENADE 537
K+++ +T+ V + + GL L + + V + +TV+ +S H K E ++
Sbjct: 236 PSKKIKIKTFTVNEKNVLFISGLFWLKVLKNGVNNLPPIITVFLPEEISAHRAKEERVND 295
Query: 538 IWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ N L PP + + ++ +K+ G DIA G GW S+
Sbjct: 296 LLHNRE--VLFPPYDNNFDFDQIEFERENVKID------KGNDIALPGAGWLSI 341
>gi|404366403|ref|ZP_10971786.1| ribosome biogenesis GTPase YqeH [Fusobacterium ulcerans ATCC 49185]
gi|313689249|gb|EFS26084.1| ribosome biogenesis GTPase YqeH [Fusobacterium ulcerans ATCC 49185]
Length = 370
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 155/349 (44%), Gaps = 47/349 (13%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC ++NYG+ + L D D+ + + + + + V V D +DF+G F
Sbjct: 36 CQRCFKIKNYGKY---MPVRLNKD-DYRKEVQEAMQ------YSKLAVAVFDIIDFEGSF 85
Query: 308 PKRAAKSLFKKLEEAKDDAKLS--KKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
DD L +++ +V++ K+DL+P P+ + WV+ R
Sbjct: 86 ----------------DDEILDVLREMDSIVVI-NKLDLIPDDKHPSEVSDWVKDRLAEE 128
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK 425
G L+ + +VS++ G+ + IK V+G N GKS+++N + V
Sbjct: 129 GIAPLD-IAIVSSKNGYGINGIFKKIKHFYPDGVEAIVLGVTNVGKSSIVNRLLGAKKVT 187
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMS-MRLNRDEQKMVEIRKEL 484
VSK PGTTL ++ I L DTPGL+ +S + KMV E+
Sbjct: 188 VSKY-----PGTTLKSVK-NQIPHTNIVLVDTPGLIPEGRISDLVCEECNLKMVP-SGEI 240
Query: 485 QPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVG 544
+T++VK G+A+ +G L+ + +++A+ +V+ H E E+ +
Sbjct: 241 SRKTFKVKKGRALLIGELLWFRVLNEDDTMPIFSLYAAKDVTFHETNTERLKELLTSGRK 300
Query: 545 IRLQPPI--GQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
L PP +D+ +L K +K+KV G ++ GLGW S+
Sbjct: 301 DLLYPPCDNCRDQYKKLEMIK-KKIKVQA------GEELVFKGLGWISV 342
>gi|262037918|ref|ZP_06011343.1| ribosome biogenesis GTPase YqeH [Leptotrichia goodfellowii F0264]
gi|261748061|gb|EEY35475.1| ribosome biogenesis GTPase YqeH [Leptotrichia goodfellowii F0264]
Length = 376
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 165/381 (43%), Gaps = 51/381 (13%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC+ ++NYGQ + NL + D+ + +A K + +++ + D +DF+G
Sbjct: 36 LCQRCYKIKNYGQ---NIGNNLKKE-DYSKEVANSAKK------SDIILPIFDIIDFEGS 85
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR-AKAG 365
F + L + ++L+ K+DLLP V PT + WV+ R +
Sbjct: 86 FTEEILDYL--------------RDYRSIILIN-KIDLLPDFVHPTEIANWVKERLMEED 130
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKEL-AGPRGNVWVIGAQNAGKSTLINTFAKKEGV 424
P + + +SA+ GV ++ I L + ++GA N GKS++IN K
Sbjct: 131 IIP--DDIGFLSAKSKYGVNGIIRKINNLFPDKKVRAVILGASNVGKSSVINLLLGK--- 185
Query: 425 KVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKEL 484
+K+T + GTTL + I + DTPGL+ +S ++ + + E+
Sbjct: 186 --NKITTSKYSGTTLKSIN-NKIPKTDIMIIDTPGLIPEGRISDLISVESGLKLVPSGEI 242
Query: 485 QPRTYRVKGGQAVHVGGLMRLDL------DQASVETIYVTVWASPNVSLHLGKIENADEI 538
+T++ + + R + D+ + I+ +V++S NV HL K + +E+
Sbjct: 243 SRKTFKPEENRVFMFDAFCRFKILETENSDRGKYKPIF-SVYSSKNVKFHLTKEDRVEEL 301
Query: 539 WKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEAS 598
K + + E + + K T N D+ AGLGW ++ +G +
Sbjct: 302 LKGDFFELM-------KKEEKENYLENKFVTYNTEIQENE-DLVIAGLGWINVK-RGPLN 352
Query: 599 LTLWTYDGIEITLREPLVLDR 619
+ L + ++ +R L R
Sbjct: 353 IELTVPEYAKVIVRPSLFRGR 373
>gi|84999858|ref|XP_954650.1| GTPase [Theileria annulata]
gi|65305648|emb|CAI73973.1| GTPase, putative [Theileria annulata]
Length = 550
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 133/308 (43%), Gaps = 46/308 (14%)
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNL 387
L + +++ + K+D+LP V + + RW++ + G K + V L+S+ K G L
Sbjct: 263 LRNRTLEVIWIANKIDVLPKVVDHSEIKRWLKSVVRHIGNSKSSDVILISSSKGTGFDKL 322
Query: 388 LAFIKE---LAGPRGNVWVIGAQNAGKSTLINTF-----AKKEGV-----KVSKLTEAPI 434
KE + PR N++V+GA N GKST +N F K G V T + I
Sbjct: 323 EHRFKEYLRVGDPR-NIYVVGATNVGKSTFVNRFLDFIKYKHVGTLNLRRSVGGTTRSAI 381
Query: 435 PGTTLGILRIGGILPAKAKLYDTPGL-LHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKG 493
PGTTL + G LP+ KL DTPG+ + + S+ + + + K + P ++
Sbjct: 382 PGTTLEFIEFG--LPSGFKLIDTPGIPIISQIPSLLYKPVDLISIAMTKTINPLYIKLDE 439
Query: 494 GQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQ 553
GQ + +G L R+DL Q S + I +A + IE E + + + ++ +
Sbjct: 440 GQTLLIGALGRVDLVQGS-KCIVQCFFACTLI------IET--EPLQVKISLNIKVTVNC 490
Query: 554 DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLRE 613
+ L + GLGWFS G + ++ G+ LR
Sbjct: 491 NGPKPLD-------------------EFVICGLGWFSFSGTGPKIVEMFVPKGVNF-LRR 530
Query: 614 PLVLDRAP 621
P ++ P
Sbjct: 531 PAMITNPP 538
>gi|340757056|ref|ZP_08693660.1| ribosome biogenesis GTPase YqeH [Fusobacterium varium ATCC 27725]
gi|251834325|gb|EES62888.1| ribosome biogenesis GTPase YqeH [Fusobacterium varium ATCC 27725]
Length = 370
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 161/358 (44%), Gaps = 50/358 (13%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVD 299
+E GE C RC ++NYG+ + L D D+ + + + + + + V D
Sbjct: 29 QENGE-HYCQRCFKIKNYGKY---MPVRLNKD-DYRKEVQEAMQ------YSKLAIAVFD 77
Query: 300 CVDFDGMFPKRAAKSLFKKLEEAKDDAKLS--KKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
+DF+G F DD L +++ +V++ K+DL+P P+ + W
Sbjct: 78 IIDFEGSF----------------DDEILDVLREMDSIVVI-NKLDLIPDDKHPSEVSDW 120
Query: 358 VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
V+ R G L+ + +VS++ G+ + IK V+G N GKS+++N
Sbjct: 121 VKDRLAEEGIAPLD-IAIVSSKNGYGINGIFKKIKHFFPDGVEAIVLGTTNVGKSSIVNR 179
Query: 418 FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMS-MRLNRDEQK 476
+ V VSK PGTTL ++ I L DTPGL+ +S + K
Sbjct: 180 LLGTKKVTVSKY-----PGTTLKSVK-NQIPHTNIVLVDTPGLIPEGRISDLVCEECNLK 233
Query: 477 MVEIRKELQPRTYRVKGGQAVHVGGLMRLD-LDQASVETIYVTVWASPNVSLHLGKIENA 535
MV E+ +T++VK G+A+ +G L+ L++ + I+ +++A+ +V+ H E
Sbjct: 234 MVP-SGEISRKTFKVKKGRALLIGELLWFKVLNEDNTMPIF-SLYAAKDVTFHETNTEKL 291
Query: 536 DEIWKNHVGIRLQPPIGQDRAS--ELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
E+ + PP R+ L K +K+KV G ++ GLGW S+
Sbjct: 292 KELLSSDRKDLFYPPCDNCRSQYKNLEMIK-KKIKVQA------GEELVFKGLGWISV 342
>gi|340756111|ref|ZP_08692744.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. D12]
gi|373114391|ref|ZP_09528604.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme 1_1_36S]
gi|419841285|ref|ZP_14364660.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|421500652|ref|ZP_15947644.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
gi|313686863|gb|EFS23698.1| ribosome biogenesis GTPase YqeH [Fusobacterium sp. D12]
gi|371652385|gb|EHO17801.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme 1_1_36S]
gi|386905611|gb|EIJ70371.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|402267206|gb|EJU16602.1| ribosome biogenesis GTPase YqeH [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
Length = 362
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 164/372 (44%), Gaps = 48/372 (12%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC + +YG E + + + D+ + + + + P A A + D +DF+G F
Sbjct: 35 CQRCFRISHYG----EHSSSFLSREDYQKELQ-QWVSPQRLALA-----IFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
D + +++ +V++ KVDL+P + P+ + WV+ R + G
Sbjct: 85 --------------QDDILDILREMDSIVVI-NKVDLIPGEKHPSEVANWVKGRLASEGI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + + G+ +L I V V+G N GKS+++N + V VS
Sbjct: 130 APLD-IAIVSCKNNYGMNGILRKIHHFYPNGVEVLVLGVTNVGKSSVVNRLLGENRVTVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
K PGTTL + I K +L DTPGL+ S + ++Q + E+ +
Sbjct: 189 KY-----PGTTL-LSTFHEITGTKLRLIDTPGLIPGGRFSDLVIEEDQLKIIPSTEISRK 242
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL 547
T++++ + V +G L++L + + +++AS V H E A + + L
Sbjct: 243 TFKLEKNRCVVLGELIKLQVLNEEGQKPIFSLYASQGVQFHETNSEKASLQTERVHCLHL 302
Query: 548 QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
+ E G ++ K ++ G ++ GL W S+ +G + + +G
Sbjct: 303 K---------EKGKFRKEKFTIAA------GEELVWKGLAWLSVK-RGPLHIEVEYPEGG 346
Query: 608 EITLREPLVLDR 619
+I +R+ + R
Sbjct: 347 DIVIRKAFIHPR 358
>gi|221059269|ref|XP_002260280.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193810353|emb|CAQ41547.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 824
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 145/333 (43%), Gaps = 22/333 (6%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKEL 394
++ + KVD LP + + W R+ + +N + +SA K + L +K
Sbjct: 423 IIWLVNKVDCLPKSTNLEMVKIWFRNLVRQIKNTHINDLIFISALKFYNLNMLEERMKYY 482
Query: 395 AG-PRG-NVWVIGAQNAGKSTLINTFAKKEGVK-----VSK-----LTEAPIPGTTLGIL 442
+G +++++G N GKS+ +N+F K K SK +T + IP TTL
Sbjct: 483 VDLEKGTDIYIVGCVNVGKSSFVNSFLKYINYKHIGDIYSKRKKGGVTTSNIPYTTLNYN 542
Query: 443 RIGGILPAKAKLYDTPGLLHPHLMSMRLNRD-EQKMVEIRKELQPRTYRVKGGQAVHVGG 501
L K+ DT G+ + S L +D + + I K +QP TY++K ++ +G
Sbjct: 543 TFQ--LKKNIKIIDTMGIPTKYQYSSILYKDIDLNSISINKRIQPFTYKLKENSSIILGS 600
Query: 502 LMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGT 561
L ++L S VT + S V++H+ + E ++ + L PP + L
Sbjct: 601 LCYINLIYGSFAL--VTFYISNRVTIHICRSEKVEQFLEKKKCSFLYPPHVEQDFHLLKP 658
Query: 562 WKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAP 621
+ +KV G ++ DI + L WFS+ +G ++ ++I R ++ D
Sbjct: 659 FVKHTVKVFGKDFESID-DIVISDLCWFSVSGRGVKVFEIYAPKNVKIYRRPSMITDAVK 717
Query: 622 FLERPGFWLPKAISDALGSKSKLEAKRRKKLEE 654
+ F G +K+ K++K +EE
Sbjct: 718 HTQVDVF----KYKSYRGRTAKVLRKKKKLIEE 746
>gi|84994782|ref|XP_952113.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65302274|emb|CAI74381.1| hypothetical protein, conserved [Theileria annulata]
Length = 620
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 165/426 (38%), Gaps = 72/426 (16%)
Query: 258 GQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFK 317
G N V+ENLI + + + R M ++ ++D VD P FK
Sbjct: 207 GNNLNLVSENLIREASSETINIVRNMLRIKKRRRITILYIIDVVD-----PHIE----FK 257
Query: 318 KLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVS 377
LE K ++ + L+ K+DLLP + + + K ++ +S
Sbjct: 258 LLEIIKQREEIGG--IRFYLILNKIDLLPKYNRDELVQFFKKMINSKVDLLKSKHIFTIS 315
Query: 378 ARKDLGVRNLLAFIKELAGPRGN-VWVIGAQNAGKSTLINTF-------------AKKEG 423
++ V L++ I E A GN + IG N+GKSTLIN AK
Sbjct: 316 SKFKKHVSELMSVILEEAKRLGNQILFIGPTNSGKSTLINLLRSSLKSKSRSLKNAKSTN 375
Query: 424 VKV---------SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
+ +LT + IPGTTLG++ I L +YDTPG+ P+ + +N
Sbjct: 376 NVIMNGSNSLMGKRLTSSIIPGTTLGVINIS--LGDNLSIYDTPGIFVPNSLISHVNGIN 433
Query: 475 QKMVEIRKELQPRT-YRVKGGQ-----------AVHVGGLMRLD----LDQASVETIYVT 518
K + I + + P T R+K G V +G M +D +D S ++
Sbjct: 434 LKDI-ITQNICPNTPIRLKKGSLTVSLFSSHIDIVTIGYSMLIDKYVRIDMTSGRDVFFK 492
Query: 519 VWASPNVSLHLGKIENADEIWKNHVGIR-LQPPIGQDRA-----------------SELG 560
+ S + LH+ ++ H + L P Q + S
Sbjct: 493 CYFSDKLKLHIKPTHKINQFLNKHYSDQFLHYPTTQHTSITSDDTVNGVDNVNSNNSTND 552
Query: 561 TWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV-LDR 619
W R++ + WD D+ GLG+ ++G A L+T I LR PL +
Sbjct: 553 NWVMRRMNIILNGWDNATCDLCIKGLGFLTIGGALSADFNLYTMKNILYYLRPPLFPKNI 612
Query: 620 APFLER 625
PF+ R
Sbjct: 613 FPFVPR 618
>gi|340370800|ref|XP_003383934.1| PREDICTED: uncharacterized protein C4orf14 homolog [Amphimedon
queenslandica]
Length = 583
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 5/171 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
L+DTPG ++ + L +E +++ +K L PRT +K GQ+V +GGL RLD Q
Sbjct: 393 LHDTPGAVNDIQATNHLTTNELRLMLPKKRLSPRTIILKEGQSVFLGGLARLDYIQGKTS 452
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGI-RLQPPIG-QDRASELGTWKDRKLKVSG 571
Y T++ S + +H + +ADE++K H+G L+ P+G +R + +L ++G
Sbjct: 453 A-YFTIFTSSYLPIHTRRTRDADEMYKRHLGQPLLKVPVGDAERIDAFPPLEPEELIITG 511
Query: 572 TSWDVNGIDIAAAGLGWFSL--GLKGEASLTLWTYDGIEITLREPLVLDRA 620
+ + DI + +GW + GL+ E + +T +G I +R P + A
Sbjct: 512 RGFSSSVCDIILSSVGWVCVTAGLEHEIKILAYTPNGKGIFMRSPSLFPTA 562
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 38/213 (17%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC LR+Y N + L PD D + + +K +V++++D +DF
Sbjct: 108 ICQRCFYLRHYN---NPLHVTLPPD---DYLKSLSHLK----DEKCLVLVIIDGIDF--- 154
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP--SQVSPTRLDRWVRHRAKA 364
SLF L L+ + K+ LV K+D+LP + R + +++ A+
Sbjct: 155 -----PSSLFPSLRTL-----LNPQFSKVYLVINKIDVLPLMDESMKIRFESYIKTEAEK 204
Query: 365 GGAP-KLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK-E 422
P + G++ VSA+ GV L I G RGNV+++G N GKS+L +
Sbjct: 205 SIDPATVIGIHYVSAKTGQGVGFLTDSITTEWGNRGNVYLLGCTNVGKSSLFKLLLQSLC 264
Query: 423 GVKVSKL-----------TEAPIPGTTLGILRI 444
GV+ +L T + PGTT+G+++
Sbjct: 265 GVQPGQLKTVNEISAPSPTISHWPGTTIGLIKF 297
>gi|443719705|gb|ELU09749.1| hypothetical protein CAPTEDRAFT_19738 [Capitella teleta]
Length = 677
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
YDTPGL++P + +L ++E +V + L PRT+ +K Q + +GGL R+D ++
Sbjct: 472 YDTPGLVNPEQLINKLTQEELAVVLHQSMLVPRTFVLKPKQVMLMGGLGRIDYADGP-KS 530
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIR-LQPPIG-QDRASELGTWKDRKLKVSGT 572
IY T + SP + + + +ADE + H+G L P+G Q R L + ++ + G
Sbjct: 531 IYFTAFTSPEIPVRVFDALDADEFYGKHIGTSVLGAPLGDQSRLLRLPSLTAKQFEAVGF 590
Query: 573 SWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLVLDRA 620
W + D+ + LGW ++ E +TL +T G + LR P +L A
Sbjct: 591 GWRESCCDLVLSSLGWVAITAGEEMPITLRGYTPAGQGLALRSPSLLKYA 640
>gi|91090296|ref|XP_971651.1| PREDICTED: similar to CG10914 CG10914-PA [Tribolium castaneum]
gi|270013800|gb|EFA10248.1| hypothetical protein TcasGA2_TC012448 [Tribolium castaneum]
Length = 709
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 128/274 (46%), Gaps = 53/274 (19%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E VC RCH L++Y + + PD D+ +V+A S + G+VV++VD +DF
Sbjct: 237 EAIVCQRCHFLKHYNLA---LQVQVTPD-DYPKVLA------SISRRGGLVVLMVDLLDF 286
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPS-------QVSPTRLDR 356
S++ + E K P LV+VG KVDLLP ++ T LD
Sbjct: 287 PC--------SIWPGIGEI-----FGYKTP-LVVVGNKVDLLPQDSRNFLKRIKQTLLD- 331
Query: 357 WVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN 416
+V+ + G+ + V L+SA+ GV +L+ + L +G+V+++G N GKS+L N
Sbjct: 332 YVK--LQGFGSFDIKEVALISAKTGFGVEDLITRLSSLNRVKGDVYIVGCTNVGKSSLFN 389
Query: 417 TFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRL 470
+ + K + + T + PGTTL +L+ PA + + L RL
Sbjct: 390 ALIQSDYCKTQAIDLIQRATTSVWPGTTLNLLKFPIKRPAGYRQF---------LREKRL 440
Query: 471 NRDEQKMVE---IRKELQPRTYRVKGGQAV-HVG 500
N + VE +RKE RT K + H+G
Sbjct: 441 NLLHKIQVEESKLRKEQLRRTRDAKYASLIGHIG 474
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
+DTPG++ P + L +E + ++ L PRT +K ++ + GL RLD +
Sbjct: 518 FDTPGVVQPDQIIHLLTTEELLLTLPKELLVPRTLCLKPNSSLFIAGLARLDYVDGPT-S 576
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIRL-QPPIGQDRASELGTWKD----RKLKV 569
I TV+AS + L + IE+A+EI++ +G L + P G + L W ++ V
Sbjct: 577 IRFTVFASQELPLTVCAIEDAEEIYQKLLGTDLFRVPSGDSK--RLSRWPSLELAKEFTV 634
Query: 570 SGTSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
G SW + D+ + GW ++ K E L WT + + +R+ L+
Sbjct: 635 KGRSWYESSNDVVLSNAGWVAVTGKTELEYKLQAWTPEKRGVYIRDCLL 683
>gi|317058880|ref|ZP_07923365.1| GTP-binding protein [Fusobacterium sp. 3_1_5R]
gi|313684556|gb|EFS21391.1| GTP-binding protein [Fusobacterium sp. 3_1_5R]
Length = 362
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 32/288 (11%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC + +YG E + + + D+ + + + + P A A V D +DF+G F
Sbjct: 35 CQRCFRVSHYG----EHSSSFLSREDYQKELQ-QWVSPKRLALA-----VFDIIDFEGSF 84
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
D + +++ +V++ KVDL+P + P+ + WV+ R + G
Sbjct: 85 --------------QDDILDILREMDSIVVI-NKVDLIPGEKHPSEVANWVKGRLASEGI 129
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS 427
L+ + +VS + + G+ +L I+ V V+G N GKS++IN K V VS
Sbjct: 130 SPLD-IAIVSCKNNYGMNGVLRKIQHFYPNGVEVLVLGVTNVGKSSVINRLLGKNRVTVS 188
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPR 487
K PGTTL + + I L DTPGL+ S + ++Q V E+ +
Sbjct: 189 KY-----PGTTL-LSTMNEISGTNLCLIDTPGLIPEGRFSDLMIEEDQLRVIPSTEISRK 242
Query: 488 TYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENA 535
T++++ + + +G ++L + + +++AS V H +E A
Sbjct: 243 TFKLEKDRCIVLGEFVKLRVLNEEEQRPIFSLYASQGVQFHETSLEKA 290
>gi|193613019|ref|XP_001952820.1| PREDICTED: uncharacterized protein C4orf14 homolog [Acyrthosiphon
pisum]
Length = 689
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 100/220 (45%), Gaps = 40/220 (18%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RCH ++ Y N D V +L+ P A +++++VD DF
Sbjct: 213 ICQRCHFIQKY---------NTALAVQVDPVEYPKLLYPIKKKRA-LIILMVDLTDFPC- 261
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK--A 364
S++ L E K +V+VG K+DLLP WV H K A
Sbjct: 262 -------SIWPNLMECIGINK------PVVVVGNKLDLLPGD-----FPGWVEHAKKSLA 303
Query: 365 GGAPK---LNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK 421
PK + V +VSA+ G+ L+ + L +G+V++IG N GKST+ NT +
Sbjct: 304 QSIPKDINIKHVTVVSAKTGFGIEELINKLHSLWQTKGDVYLIGCTNVGKSTMFNTLLQS 363
Query: 422 EGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
+ K V + T +P PGTTL +L+ + P+ +LY
Sbjct: 364 DYCKVKAVDLVQRATTSPWPGTTLNLLKFPIMRPSNWRLY 403
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 92/180 (51%), Gaps = 13/180 (7%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
+YDTPG++HP L +E M ++PRT+ ++ Q + VGGL R+D + +
Sbjct: 498 MYDTPGVVHPDQSINLLTTEELMMTLPTTVMKPRTFSLRPLQTLFVGGLGRIDCLKTGAK 557
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQP-PIGQ-DRASE---LGTWKDRKLK 568
+ TV+++ + + + E+ADE+++ +G L P G +R S+ L ++K+ ++
Sbjct: 558 FVRFTVFSAHTLPITVCNSEDADEVYEKLLGTHLLAVPCGSIERLSKWPGLSSYKN-PIQ 616
Query: 569 VSGTSWDVNGIDIAAAGLGWFSLGLKGE--ASLTLWTYDGIEITLREPLVL-----DRAP 621
++G + + DI + GW ++ G + WT + I +R P +L DR P
Sbjct: 617 LTGINEKTSCADIVLSSAGWVAVTPYGNDVCYVQAWTPESRGIYIRTPPLLRYAINDRGP 676
>gi|255030495|ref|ZP_05302446.1| GTP-binding protein YqeH [Listeria monocytogenes LO28]
Length = 178
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 14/189 (7%)
Query: 429 LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRT 488
+T + PGTTL + I L L DTPG+++ H M+ ++ K + +KE++P
Sbjct: 3 ITTSQFPGTTLDKIEIP--LADGNVLVDTPGIINHHQMAHFIDTTTLKAITPKKEVKPAV 60
Query: 489 YRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQ 548
+++ Q + +G L RLD +++ V+ S N+ +H K+E A+ +++ G+ LQ
Sbjct: 61 FQLNEEQTLFLGALARLDYVSGGRKSL--VVYVSNNLPIHRTKLEKAEALYEKQAGLVLQ 118
Query: 549 PPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSLGLKGEASLTLWTYDGI 607
PP +D + K+ S+ V DI +GLGW ++ +G A +T W +G+
Sbjct: 119 PPTEEDMKT--------LPKLVPYSFTVKEKADIVFSGLGWVTIP-EGGAKVTAWVPEGV 169
Query: 608 EITLREPLV 616
T+R LV
Sbjct: 170 SATIRTSLV 178
>gi|71031054|ref|XP_765169.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352125|gb|EAN32886.1| hypothetical protein, conserved [Theileria parva]
Length = 662
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 132/331 (39%), Gaps = 43/331 (12%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKE 393
+ L+ K+DLLP + + + K ++ +S + V L+ I
Sbjct: 334 RFYLILNKIDLLPKHNKEELVQFFKKMINSKVELLKAKHIFTISGKYRKNVGELMGVILT 393
Query: 394 LAGPRGN-VWVIGAQNAGKSTLINTFAKK----------------------EGVKVSKLT 430
A GN + IG N+GKSTLIN K+ + ++T
Sbjct: 394 EAKRLGNQILFIGPTNSGKSTLINLLHKQFTHNSLHKQFTHNTTNGVTNKSDNCVCKRVT 453
Query: 431 EAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYR 490
+ IPGTTLG++ I L +YDTPG+ P+ + +N K + + +
Sbjct: 454 SSIIPGTTLGVINIS--LGGGLSIYDTPGIFVPNSLISHVNDVNLKHLITQNIYPNKPIT 511
Query: 491 VKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR-LQP 549
+K G ++ + +RLD+ S ++ + S + LH+ ++ + H + L
Sbjct: 512 LKKGYSMLIDRYVRLDM--ISGRDVFFKCYFSDKLKLHIKPTHIINQFLRKHYNNQVLYY 569
Query: 550 PIGQDRAS--------------ELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKG 595
P Q + TW R++ V + W+V D+ GLG+ ++G
Sbjct: 570 PTTQYPTTINSGNNMNNNTTVNTGETWVGRRIGVVMSGWEVATCDLCIKGLGFLTVGGAL 629
Query: 596 EASLTLWTYDGIEITLREPLVLDRA-PFLER 625
A L+T I LR P+ PF+ R
Sbjct: 630 SADFNLYTMKDISCHLRPPIFPKNIFPFVPR 660
>gi|124810009|ref|XP_001348738.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|23497637|gb|AAN37177.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 797
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 128/297 (43%), Gaps = 18/297 (6%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKEL 394
++ + KVD LP + + W R+ + +N + +SA K L +K
Sbjct: 423 IIWLVNKVDCLPKSTNLDMIKIWFRNLVRQIKNSHINDLIFISALKFYNYDMLEERMKYY 482
Query: 395 AG-PRG-NVWVIGAQNAGKSTLINTFAKKEGVK-----VSK-----LTEAPIPGTTLGIL 442
+G +++++G N GKST +N+F K K +K +T + IP TTL
Sbjct: 483 VDIDKGTDIYIVGCVNVGKSTFVNSFLKYINYKHIGDIYNKRKKGGVTTSNIPYTTLNYN 542
Query: 443 RIGGILPAKAKLYDTPGLLHPHLMSMRLNRD-EQKMVEIRKELQPRTYRVKGGQAVHVGG 501
L + DT G+ + S L +D + + I K++QP TY++K ++ +G
Sbjct: 543 VFK--LKKNINIIDTIGIPTKYQYSSILYKDIDLNGICINKKIQPFTYKLKEDSSIIIGS 600
Query: 502 LMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGT 561
+ ++ + + T + S V++H+ + E + + L PP L
Sbjct: 601 MCYINFIHGTFSLL--TFYLSNKVTVHMCRTEKVESFLEKKKCSFLYPPHINSDFDLLKP 658
Query: 562 WKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLD 618
+ +K+ G ++ DI + LGWFS+ G ++ I+I R ++ D
Sbjct: 659 FVKHTIKIYGKDFESVD-DIVISDLGWFSITGSGTKIFEIYVPKNIKIYRRPSMITD 714
>gi|308802972|ref|XP_003078799.1| Predicted GTPases (ISS) [Ostreococcus tauri]
gi|116057252|emb|CAL51679.1| Predicted GTPases (ISS) [Ostreococcus tauri]
Length = 588
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 138/298 (46%), Gaps = 51/298 (17%)
Query: 236 REAQKEKGEVTVCARCHSLRNYGQVKNEVAENLI---PDFDFDRVIATRLMKPSGNANAG 292
R+A + ++ +CARC L N V + + P + + +L KP A
Sbjct: 85 RKATHGQWDMMLCARCAKLSNGAYVNAVEGQGGVKASPGLITPKELRDQL-KPIREKKA- 142
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
+VV VVD DF G F L++ +D + +VLV TK+DLL + V
Sbjct: 143 LVVKVVDATDFHGSF-----------LKKVRDVVGGNP----IVLVVTKIDLLGNAVDHD 187
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRN-LLAFIKELAGPRGNVWVIGAQNAGK 411
L+RWV A+ L G+ LVS+R+ G+R +L ++E G +V+VIGA N GK
Sbjct: 188 ALERWVAKEAETRRL-TLAGIALVSSRRGSGMREAVLQMMRERNGR--DVYVIGAANVGK 244
Query: 412 STLI-----------NTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGL 460
S+ I N FA + + V+ + +PGTTLG++ + K L+DTPG+
Sbjct: 245 SSFIRAAMEELRSAGNYFAPTKRLPVA----SAMPGTTLGVIPLKA-FEGKGVLFDTPGV 299
Query: 461 LHPH----------LMSMRLNRDEQKMVEIRKEL-QPRTYRVKGGQAVHVGGLMRLDL 507
H L M+L +K V E +P + G +++ G +R+D+
Sbjct: 300 FLHHRLNSLLSAEDLSEMKLGSSLKKFVPPTPECAEPPGFASFKGYSLYWGSFVRVDV 357
>gi|449674982|ref|XP_002162076.2| PREDICTED: nitric oxide-associated protein 1-like [Hydra
magnipapillata]
Length = 666
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQA--- 510
+YDTPG+ + + L +E + + PRT+ ++ G + +GGL RLD +
Sbjct: 384 IYDTPGVYNSSQLLQFLTVEEMHKLYPELWIVPRTFLLQPGSCLFIGGLARLDYNSISKI 443
Query: 511 -----------SVETIYVTVWASPNVSLHLGKIENADEIW-KNHVGIRLQPPIGQD-RAS 557
S E+I+VTV SP+V H IE+AD + K V L+ PIG + R
Sbjct: 444 ESDSANIQLAKSAESIFVTVMMSPSVPCHPTVIESADVKYEKLFVNNVLEVPIGNELRYK 503
Query: 558 ELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLG--LKGEASLTLWTYDGIEITLRE-P 614
E + +V G + ++N D+ GLGW S+ + LTL T +GI LRE P
Sbjct: 504 EFPRLLPKTYQVIGKNLNINACDLVLHGLGWLSVASVFNTKVELTLHTPNGIGQELREKP 563
Query: 615 LV 616
L+
Sbjct: 564 LL 565
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 88/209 (42%), Gaps = 37/209 (17%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C C LR+Y N ++ L + D+++ R + + +++ VVD D +G
Sbjct: 122 CVSCFKLRHYN---NRLSSPLPNNEIIDQLMHIR-------STSSLILYVVDMFDIEGTL 171
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ------VSPTRLDRWVRHR 361
+ + K+ ++++VG K+D P + V R+ ++H
Sbjct: 172 MDKVLSYIGKR--------------KRIIIVGNKIDRFPKEHGVKGEVQLERMKDLLKHI 217
Query: 362 AKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
G N + L+SA+ G+ L+ I + +++++G N GKS+L N
Sbjct: 218 CFQRGLEGCNFRDICLISAKTGFGLETLVKKISKHREVDMDIYLVGCTNVGKSSLYNLLQ 277
Query: 420 KKEGVKVSK-LTEAPI----PGTTLGILR 443
V +SK L I P TT+ +LR
Sbjct: 278 NMLNVHMSKRLPPQAIVHYTPVTTVSLLR 306
>gi|242021419|ref|XP_002431142.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516391|gb|EEB18404.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 528
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG++ + + L E + + + PR + +K G ++ +GGL RLD + V
Sbjct: 329 FYDTPGVVQKNQLINLLTTQELSITLPKTVVTPRIFHLKSGTSLFIGGLARLDF-VSGVN 387
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL--QPPIGQDRASELGTWKDRKLKVSG 571
+I++ V+AS + + + IENA++++ +G L P G DR S+ K ++ G
Sbjct: 388 SIWLCVFASSELPVTITSIENAEDVYNTLLGSNLFKVPCGGDDRLSKWPELSSEKFEIVG 447
Query: 572 TSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLRE-PLV 616
D D+ + GW S+ LK TL WT G I LR+ P++
Sbjct: 448 KYPDEASADVVLSSAGWVSIALKPANYCTLEAWTPQGKGICLRKVPII 495
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 35/217 (16%)
Query: 236 REAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVV 295
++A+K +GE+ C RC+ L Y + N++P+ ++ +++ K +V+
Sbjct: 42 KKAKKLRGEI--CQRCYFLNEYNIA---LGVNVMPE-EYQFIVSQIKNK------KALVI 89
Query: 296 MVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ--VSPTR 353
++VD +DF S++ +++ D + VLVG K+DL +
Sbjct: 90 LMVDLLDFPC--------SIWPGIDKLIGDNNV-------VLVGNKIDLFYQEKKFETQM 134
Query: 354 LDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
L+ K K+ + L+SA+ GV L+ F+ ++ G +G+++++G N GKST
Sbjct: 135 LNSLKEELKKENLQSKILDIQLISAKTGYGVEKLINFLGKVWGTKGDMYLVGCTNVGKST 194
Query: 414 LINTFAKKEGVKV---SKLTEAPI---PGTTLGILRI 444
L N K + ++ +KL A I PGTTL +L+
Sbjct: 195 LFNILLKSDLCRIEADNKLHRATISSWPGTTLNLLKF 231
>gi|156100137|ref|XP_001615796.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804670|gb|EDL46069.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 795
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 144/333 (43%), Gaps = 22/333 (6%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIK-E 393
++ + KVD LP + R+ W R+ + +N + +SA K L +K
Sbjct: 421 IIWLVNKVDCLPKMANLERVKIWFRNLVRQIKNAHINDLIFISALKFFNFNVLEERMKFH 480
Query: 394 LAGPRG-NVWVIGAQNAGKSTLINTFAKKEGVK-----VSK-----LTEAPIPGTTLGIL 442
+ +G +++++G N GKST +N+F K K S+ +T + IP TTL
Sbjct: 481 VDLEKGTDIYIVGCVNVGKSTFVNSFLKYINYKHLGDIYSRRKKGGVTTSNIPYTTLNYN 540
Query: 443 RIGGILPAKAKLYDTPGLLHPHLMSMRLNRD-EQKMVEIRKELQPRTYRVKGGQAVHVGG 501
L K+ DT G+ + S L +D + + K +QP TY++K ++ +G
Sbjct: 541 TFQ--LKKNIKIIDTMGIPTKYQYSSILYKDIDLNSISFHKRIQPLTYKLKENASLILGS 598
Query: 502 LMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGT 561
L ++L S + T++ S V++H+ + E + + L PP + L
Sbjct: 599 LCYINLVYGSFTLL--TLYISNRVTIHMCRSEKVESFLERKKCSFLYPPHVKADFELLKP 656
Query: 562 WKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAP 621
+ +KV G ++ DI L WFS+ +G ++ ++I R ++ D
Sbjct: 657 FVKHTVKVVGKDFESID-DIVIGDLCWFSVTGRGIKVFEIYAPKNLKIYRRPSMISDAVR 715
Query: 622 FLERPGFWLPKAISDALGSKSKLEAKRRKKLEE 654
+ F G +K+ K++K +EE
Sbjct: 716 HTQVDVF----KCKSYRGRTAKVLRKKKKLIEE 744
>gi|413926891|gb|AFW66823.1| hypothetical protein ZEAMMB73_244891 [Zea mays]
Length = 252
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 26/231 (11%)
Query: 414 LINTFAKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMR 469
++ T A K+ V + K ++ +PGTTLG ++I L KLYDTPG+ H +
Sbjct: 1 MLRTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFL-GGGKLYDTPGVHLHHRQAAV 59
Query: 470 LNRDEQKMVEIRKELQPRTYRVK------GGQAVHVGGLMRLDLDQASVETIYVTVWASP 523
++ D+ + + L+ R + G ++ GL+R+D+ +A + +T +
Sbjct: 60 IHADDLPSLAPQSRLKGRCFPANDTDVELSGNSLFWAGLVRIDVIKALPRS-RLTFYGPK 118
Query: 524 NVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-LGTWKDRKLKVSGTSWDVNGIDIA 582
+ +++ AD+ ++ VG+ L PP G++RA G R+LK+ D DIA
Sbjct: 119 KLKINMVPTTEADQFYETEVGVTLTPPTGKERAEGWTGLQGVRELKIKYEERDRPACDIA 178
Query: 583 AAGLGWFSLGLKGEASLTL-WTYDG------------IEITLREPLVLDRA 620
+GLGW S+ G S + YDG +E+ +R PL + +A
Sbjct: 179 ISGLGWISVEPSGVPSNSAEEVYDGGELHLVVHVPKPVEVFMRPPLPVGKA 229
>gi|82705979|ref|XP_727192.1| GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23482916|gb|EAA18757.1| GTPase of unknown function, putative [Plasmodium yoelii yoelii]
Length = 831
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 199/488 (40%), Gaps = 72/488 (14%)
Query: 155 EDIVDGNFDQSDGKESDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGYG--- 211
++I + NF+ + ++ + + D+ DS K + ++EDD+++ + V Y
Sbjct: 300 DEINENNFENIKNDQCEAKEVRINDETDSQINNKKSVFQNEDDINILENNTSEVKYYEDS 359
Query: 212 --NITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLI 269
NI + + +KK + K + K +A EK +++ + RN + NLI
Sbjct: 360 SYNIDKRFINMYEKKDILKKRNEIKRLDA--EKMDISNAKYIEADRN------NIMNNLI 411
Query: 270 PDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG-MFPKRAAKSLFKKLEEAKDDAKL 328
++ K S +V+ ++D + + + P+ K +
Sbjct: 412 K----------KMKKKS------LVLYIIDITNIENTILPELYIGCKNKDIN-------- 447
Query: 329 SKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLL 388
++ + K+D LP + + W R+ + +N + +SA K L
Sbjct: 448 ------IIWLVNKIDCLPKSTNLDIIKIWFRNMIRQIKNTHINDLIFISALKCYNYNILE 501
Query: 389 AFIKELAG-PRG-NVWVIGAQNAGKSTLINTFA---------------KKEGVKVSKLTE 431
+K +G +++++G N GKS+ +N+F KK GV VS
Sbjct: 502 ERMKNYIDIDKGIDIYIVGCVNVGKSSFLNSFLKFINYKHIGDIYNKRKKGGVTVSN--- 558
Query: 432 APIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD-EQKMVEIRKELQPRTYR 490
IP TTL L + DT G+ + S L +D + + I K++QP TY+
Sbjct: 559 --IPYTTLNYNVFK--LKKDINIIDTIGIPTKYQYSSILYKDIDLNSIIINKKIQPFTYK 614
Query: 491 VKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPP 550
+K ++ +G L ++L + + T + S V++H+ + E + + L PP
Sbjct: 615 LKDDYSIILGSLCYINLIYGNFALL--TFYISNKVTIHMCRSEKVENFLEKKKCSFLYPP 672
Query: 551 IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEIT 610
L + +KV G ++ DI + L WFS+ +G ++ I+I
Sbjct: 673 HVYSDFDLLKPFVKHTVKVLGKDYESID-DIVISDLCWFSITGRGIKIFEIYAPKNIKIY 731
Query: 611 LREPLVLD 618
R ++ D
Sbjct: 732 RRPSMIND 739
>gi|342181471|emb|CCC90950.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 578
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 200/521 (38%), Gaps = 121/521 (23%)
Query: 197 DLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQ----------------- 239
D D D F V G++ ++ER +K + ++AE + E Q
Sbjct: 41 DQDEDSF--GYVRKGDVERYIIERQQKMR-ARAEYADRMSELQAHWEKHGRQVGEEWLDF 97
Query: 240 ----------KEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNA 289
+++ + VC RCH+L N G V+ PDF +++ A R K
Sbjct: 98 MTQEEFDAFYRDQNKPFVCHRCHALENLG-VEGRRRIWSAPDFT-EKLRALREKK----- 150
Query: 290 NAGVVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLL 345
VVV+VVD DF G P + + + K D ++ G +
Sbjct: 151 --CVVVLVVDITDFPGTMVYDLPGLISMNNDVIIAVNKMDCVRNRSFS---YSGKDRAIA 205
Query: 346 PSQVSPTRLDRWVRHRAKAGGAPK--LNGVYLVSARKDLGVRNLLAFIKE-----LAGPR 398
V + RWV A G P+ + V +SA++ + L++ ++E L P
Sbjct: 206 ACLVGEKYIRRWVTGIAVQFGLPRHQIRDVVPISAKRGWNIETLISAVEEASNLNLRRPT 265
Query: 399 GNV--WVIGAQNAGKSTLINTFAKKEGV-------------------------------- 424
+ + +G N GKS++IN A K V
Sbjct: 266 KPMPTYFVGVANVGKSSVINAIAHKLYVPLPPHPESRKVYYTKRAEDGKESVFWRWYTPP 325
Query: 425 ----------------KVSKL-TEAPIPGTTLGILRIG-----GILPAKAKLYDTPGLL- 461
K SKL T + +PGTT+ + + G +A L+DTPGLL
Sbjct: 326 NVNQAEMIDIPSRHDKKASKLLTTSSLPGTTVDAVAVRVSLVRGSNKDRAYLFDTPGLLP 385
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWA 521
H H S L + + IRK P+ + + G + +GGL +D+ + + + V+
Sbjct: 386 HWHRHSP-LTLLQMRRTLIRKFRNPQCFILVPGNTLLLGGLCAIDIVKGTSRGMLFMVYT 444
Query: 522 SPNVSLHLGKIENADEIWKNHVGIRLQPP-----IGQDRASELGTWKDRKLKVSGTSWDV 576
S V + + +DE W + +G L PP +G R +E ++ K +
Sbjct: 445 SQKVRNAIINTDQSDEFWSSQLGKALDPPGSLEQLGDLRLTESKSYLFECYKRNSRR--- 501
Query: 577 NGIDIAAAGLGW--FSLGLKGEASLTLWTYDGIEITLREPL 615
DI GLGW F + + L + T G+ +REPL
Sbjct: 502 PKADIYVCGLGWVAFCVNEPADVVLRVRTIPGVIHGIREPL 542
>gi|255027220|ref|ZP_05299206.1| GTP-binding protein YqeH [Listeria monocytogenes FSL J2-003]
Length = 161
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 86/163 (52%), Gaps = 10/163 (6%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
L DTPG+++ H M+ ++ K + +KE++P +++ Q + +G L RLD +
Sbjct: 9 LVDTPGIINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRK 68
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTS 573
++ V+ S N+ +H K+E AD +++ GI LQPP +E G KL V +
Sbjct: 69 SL--VVYVSNNLPIHRTKLEKADALYERQAGIVLQPP------TEEGMETLPKL-VPYSF 119
Query: 574 WDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
DI +GLGW ++ +G A +T W +G+ T+R LV
Sbjct: 120 TIKEKADIVFSGLGWVTIP-EGGAKVTAWVPEGVSATIRTSLV 161
>gi|343475714|emb|CCD12971.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 920
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 200/521 (38%), Gaps = 121/521 (23%)
Query: 197 DLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREAQ----------------- 239
D D D F V G++ ++ER +K + ++AE + E Q
Sbjct: 310 DQDEDSF--GYVRKGDVERYIIERQQKMR-ARAEYADRMSELQAHWEKHGRQVGEEWLDF 366
Query: 240 ----------KEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNA 289
+++ + VC RCH+L N G V+ PDF +++ A R K
Sbjct: 367 MTQEEFDAFYRDQNKPFVCHRCHALENLG-VEGRRRIWSAPDFT-EKLRALREKK----- 419
Query: 290 NAGVVVMVVDCVDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLL 345
VVV+VVD DF G P + + + K D ++ G +
Sbjct: 420 --CVVVLVVDITDFPGTMVYDLPGLISMNNDVIIAVNKMDCVRNRSFN---YSGKDRAIA 474
Query: 346 PSQVSPTRLDRWVRHRAKAGGAPK--LNGVYLVSARKDLGVRNLLAFIKE-----LAGPR 398
V + RWV A G P+ + V +SA++ + L++ ++E L P
Sbjct: 475 ACLVGEKYIRRWVTGIAVQFGLPRHQIRDVVPISAKRGWNIETLISAVEEASNLNLRRPT 534
Query: 399 GNV--WVIGAQNAGKSTLINTFAKKEGV-------------------------------- 424
+ + +G N GKS++IN A K V
Sbjct: 535 KPMPTYFVGVANVGKSSVINAIAHKLYVPLPPHPESRKVYYTKRAEDGKESVFWRWYTPP 594
Query: 425 ----------------KVSKL-TEAPIPGTTLGILRIG-----GILPAKAKLYDTPGLL- 461
K SKL T + +PGTT+ + + G +A L+DTPGLL
Sbjct: 595 NVNQAEMIDIPSRHDKKASKLLTTSSLPGTTVDAVAVRVSLVRGSNKDRAYLFDTPGLLP 654
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWA 521
H H S L + + IRK P+ + + G + +GGL +D+ + + + V+
Sbjct: 655 HWHRHSP-LTLLQMRRTLIRKFRNPQCFILVPGNTLLLGGLCAIDIVKGTSRGMLFMVYT 713
Query: 522 SPNVSLHLGKIENADEIWKNHVGIRLQPP-----IGQDRASELGTWKDRKLKVSGTSWDV 576
S V + + +DE W + +G L PP +G R +E ++ K +
Sbjct: 714 SQKVRNAIINTDQSDEFWSSQLGKALDPPGSLEQLGDLRLTESKSYLFECYKRNSRR--- 770
Query: 577 NGIDIAAAGLGW--FSLGLKGEASLTLWTYDGIEITLREPL 615
DI GLGW F + + L + T G+ +REPL
Sbjct: 771 PKADIYVCGLGWVAFCVNEPADVVLRVRTIPGVIHGIREPL 811
>gi|309803213|ref|ZP_07697310.1| GTP-binding protein [Lactobacillus iners LactinV 11V1-d]
gi|308164721|gb|EFO66971.1| GTP-binding protein [Lactobacillus iners LactinV 11V1-d]
Length = 174
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 429 LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRT 488
+T + PGTTL ++I L L DTPG+L M+ RL E ++V +K+L+P T
Sbjct: 2 ITTSKFPGTTLDSIKIP--LNEGHYLVDTPGILSKKQMASRLTGSELELVAPKKQLKPAT 59
Query: 489 YRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQ 548
Y++ GQ + + GL R+D + T++ + ++ LH K NADE + H L
Sbjct: 60 YQLLPGQTIFLAGLGRIDFIKGPASGF--TIYVARDLYLHRTKTINADEFYLKHKSDLLN 117
Query: 549 PPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIE 608
PP D +LG K + S S DI G+G+ + + + +T +GI
Sbjct: 118 PPCDND---DLGALKGQLYSTSEKS------DILFGGVGFIT--VPSGVVIKAYTPEGIG 166
Query: 609 ITLREPLV 616
+ +R L+
Sbjct: 167 LGIRRALI 174
>gi|407417084|gb|EKF37934.1| hypothetical protein MOQ_001862 [Trypanosoma cruzi marinkellei]
Length = 925
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 176/461 (38%), Gaps = 111/461 (24%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVD 299
K+K + VC RCH+L N G V+ PDF +++ A R K VVV+VVD
Sbjct: 377 KDKNKPFVCHRCHALENLG-VEGRRQIWSAPDFT-EKLRALREKK-------CVVVLVVD 427
Query: 300 CVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ----------- 348
DF G D L +++ K+D + ++
Sbjct: 428 IADFPGTM--------------VYDLPGLISMNNDVIIAVNKMDCVRNRSFNYSNKDRAI 473
Query: 349 ----VSPTRLDRWVRHRAKAGGAPK--LNGVYLVSARKDLGVRNLLAFIKE-----LAGP 397
V+ + RWV A G P+ + V +SA++ V L+A ++E L P
Sbjct: 474 AARLVTERYVRRWVTGIALQFGLPRHQIKDVVPISAKRGWNVEKLIAAVEEASNLNLTRP 533
Query: 398 RGNV--WVIGAQNAGKSTLINTFAKKEGV------------------------------- 424
+ + +G N GKS++IN A K V
Sbjct: 534 IKPMPTYFVGVANVGKSSVINAIAHKLYVPVPPHPESRKVYYTRKAKDGTEAVFWRWYTP 593
Query: 425 -----------------KVSKL-TEAPIPGTTL--GILRIG---GILPAKAKLYDTPGLL 461
K SKL T + +PGTT+ +R+ G A L+DTPGLL
Sbjct: 594 PNVNQAEMIDIPSRHDKKASKLLTVSSLPGTTVEANAVRVSLTKGAPGDAAYLFDTPGLL 653
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWA 521
S L + + IRK P+ + + G + + GL +D+ + + + V+
Sbjct: 654 PHWHHSSPLTLLQMRRTLIRKYRNPQCFILMPGNTLFLSGLAAIDVVKGTSRGMLFMVYT 713
Query: 522 SPNVSLHLGKIENADEIWKNHVGIRLQPP-----IGQDRASELGTWKDRKLKVSGTSWDV 576
S V + E +DE W++ +G L PP IG R +E + +
Sbjct: 714 SQKVRNAIIATERSDEFWQDQLGKALDPPGSLEQIGDLRLTESKCY---LFECYPRHRRR 770
Query: 577 NGIDIAAAGLGW--FSLGLKGEASLTLWTYDGIEITLREPL 615
D+ G+GW F + + L + T G+ +REPL
Sbjct: 771 PKADVYVCGIGWTSFCVNETCDVVLRVRTLPGVIHGVREPL 811
>gi|205374257|ref|ZP_03227056.1| GTP-binding protein YqeH [Bacillus coahuilensis m4-4]
Length = 164
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKEL 394
++L+G KVDLLP V P++L W++ AK G ++ V L+SA K + L I E
Sbjct: 20 VLLIGNKVDLLPKSVKPSKLVHWMKKEAKELGLKPVD-VQLISADKGTNILKALELI-ET 77
Query: 395 AGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKL 454
+V+++G N GKST IN ++ + + +T + PGTTL ++ I L L
Sbjct: 78 YRKGQDVYIVGCTNVGKSTFINRIIQEVSGEKNVITTSHFPGTTLDMIEIP--LDDGQAL 135
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
DTPG+++ H M+ +++ K + ++K+
Sbjct: 136 IDTPGIINHHQMAHYVDKKSLKPLHLKKK 164
>gi|309805283|ref|ZP_07699335.1| GTP-binding protein [Lactobacillus iners LactinV 09V1-c]
gi|308165517|gb|EFO67748.1| GTP-binding protein [Lactobacillus iners LactinV 09V1-c]
Length = 174
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 429 LTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRT 488
+T + PGTTL ++I L L DTPG+L M+ RL E ++V +K+L+P T
Sbjct: 2 ITTSKFPGTTLDSIKIP--LNEGHYLVDTPGILSKKQMASRLTGSELELVAPKKQLKPAT 59
Query: 489 YRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQ 548
Y++ GQ + + GL R+D + T++ + ++ LH K NADE + H L
Sbjct: 60 YQLLPGQTIFLAGLGRIDFIKGPASGF--TIYVARDLYLHRTKTINADEFYLKHKSDLLN 117
Query: 549 PPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIE 608
PP D +LG K + S S DI G+G+ + + + +T +GI
Sbjct: 118 PPCDSD---DLGALKGQLYSTSEKS------DILFGGVGFIT--VPSGVVIKAYTPEGIG 166
Query: 609 ITLREPLV 616
+ +R L+
Sbjct: 167 LGIRRALI 174
>gi|146318022|ref|YP_001197734.1| GTPase [Streptococcus suis 05ZYH33]
gi|145688828|gb|ABP89334.1| Predicted GTPase [Streptococcus suis 05ZYH33]
Length = 162
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 11/163 (6%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
+YDTPG++H H M+ L K + RKE++P+TY++ Q + + GL R D + E
Sbjct: 11 IYDTPGIIHRHQMAHYLTAKNLKYISPRKEIKPKTYQLNPEQTLFLAGLGRFDF--VAGE 68
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTS 573
T + + LH K++ A E ++ H G L PP ++ E + ++ +
Sbjct: 69 RQGFTAFFDNELQLHRTKLQGASEFYQKHAGSLLVPPTSKE-LKEFPELVRHEFTINEKT 127
Query: 574 WDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
D+ +GLGW + K A + W G+++ +R+ ++
Sbjct: 128 ------DVVFSGLGWIRVNEK--AKIAAWAPKGVDVVIRKAII 162
>gi|146318021|ref|YP_001197733.1| GTPase [Streptococcus suis 05ZYH33]
gi|145688827|gb|ABP89333.1| Predicted GTPase [Streptococcus suis 05ZYH33]
Length = 212
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 40/218 (18%)
Query: 233 KKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAG 292
+ A E E G++ C RC LR+Y NE+++ I D DF +L+ G ++A
Sbjct: 26 QSALEKGLETGQL-YCQRCFRLRHY----NEISDVNISDDDF-----LKLLHSVGESDA- 74
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV------LVGTKVDLLP 346
+VV V+D DF+G + LP+ + LVG K D+LP
Sbjct: 75 LVVNVIDIFDFNG---------------------SVIPGLPRFISGNDVLLVGNKQDILP 113
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
V ++ +W+ RA G ++ V L SA+ +++L+ I++ R +V+V+G
Sbjct: 114 KSVKTGKVTQWLTERAHEIGMRPVD-VVLTSAQNKQAIKDLIEKIEQHRKGR-DVYVVGV 171
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRI 444
N GKSTLIN ++ +T + PGTTL + I
Sbjct: 172 TNVGKSTLINAIIQEITGDKDVITTSRFPGTTLDKIEI 209
>gi|348670681|gb|EGZ10502.1| hypothetical protein PHYSODRAFT_518854 [Phytophthora sojae]
Length = 513
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 185/485 (38%), Gaps = 146/485 (30%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFD-RVIATRLMKPSGNANAGVVVMVVDCVDFDG- 305
C RC + YG++ ++ +P +++ RV+ R + +++ +VD +D G
Sbjct: 43 CERCFQMTQYGKI----SDTKMPYQEYEKRVMELR-------SKDMLMIQLVDILDISGS 91
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG 365
+ PK A+ +F K ++LV K DL+P++ RL R ++ AK
Sbjct: 92 LLPK--ARHIFGK--------------KPVMLVVNKGDLVPTKSGIRRLMRRIKQEAKDA 135
Query: 366 GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA------ 419
G L +YL+SA K +G++ ++ + + R ++ V+GA N GKST +N+F
Sbjct: 136 GIDNLISIYLISAMKRIGMKEIVEDVAKYREGR-DICVVGAANVGKSTFLNSFLSHLVDR 194
Query: 420 --KKEGVKVSKLTEAPIP----GTTLGILRIGGILPAKAK-------------------- 453
+ K K+ E P+ T +L I L A+AK
Sbjct: 195 KWQHNHRKYMKMAEVPLSELENDETATMLNIDDELLAEAKAEKEKQTAVEGETTVVTPHG 254
Query: 454 -LYDTPG-------------------------LLHPHLMSMRLNR--------------D 473
LY PG L HL M N
Sbjct: 255 ELYVAPGEDPEMVEISAEEEREMTTSPLPGTTLAVQHLPVMVRNEVFNILDTPGLITDTK 314
Query: 474 EQKMVEI--------------RKELQPRTYRVKGGQAVHVGGLMRLD---LDQASVETIY 516
QK+VE+ K+L TYRV+ G+++ +G L R D L + + +
Sbjct: 315 RQKLVEVLALDGAAKLKNVFPTKQLPVTTYRVRPGRSLFLGALARFDYETLGNDNDKNML 374
Query: 517 VTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELG--------TWKDRKLK 568
+ W + HL E A++ + H G L PP G D S G KD L
Sbjct: 375 LLSWYG-VLPGHLTNTERAEDTFVKHAGGILSPPRGLDAMSFTGPLTLSQNVYLKDYVLD 433
Query: 569 VSGTSWD------VNGIDIAAAGLGWFSLG---LKGEAS---------LTLWTYDGIEIT 610
T +++ G GW S+ L G A+ +++ T G+ +
Sbjct: 434 SVLTKSKHKKPKRTTVVELEVPGFGWLSVTAVDLDGTAASQKTLNQGKISVHTCRGLSVV 493
Query: 611 LREPL 615
R PL
Sbjct: 494 PRSPL 498
>gi|442762765|gb|JAA73541.1| Hypothetical protein, partial [Ixodes ricinus]
Length = 212
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQAS-VE 513
YDTPG ++ + L +E V ++ + PRT ++ Q +++ GL R+DL Q
Sbjct: 33 YDTPGAVYRDQILDILTLEELLKVLPKEIITPRTVLLRLNQTLYLSGLARVDLLQVPRSR 92
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIR-LQPPIGQ-DRASELGTWKDRKLKVSG 571
IY TV+ASP + +H+ +A+E +++H+G L P+G R + + ++L G
Sbjct: 93 HIYATVFASPQLPIHIVDTPDAEEFYRSHLGTEMLGVPLGSAKRLVDFPVLEGKELTYVG 152
Query: 572 TSWDVNGIDIAAAGLGWFSLGLKG--EASLTLWTYDGIEITLREPLVLDRA 620
W + D+ + GW S EA++ WT +G I R P +L A
Sbjct: 153 QGWKSSCGDVVLSSAGWISFTFNNDEEATVRAWTPEGRGIHRRVPAMLPEA 203
>gi|158299358|ref|XP_319462.4| AGAP010271-PA [Anopheles gambiae str. PEST]
gi|157014326|gb|EAA13944.4| AGAP010271-PA [Anopheles gambiae str. PEST]
Length = 596
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 38/228 (16%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKN-EVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVV 298
KE+ T C RCH L++Y N V+ N D+ +++ S + V++V
Sbjct: 119 KEQLLTTNCQRCHFLKHYNVAVNVTVSAN-----DYIGILS------SIKTKKALAVLLV 167
Query: 299 DCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR-- 356
D +DF S++ L E L + P +++VG KVDLLP Q S L+
Sbjct: 168 DVLDFPC--------SIWPGLSEI-----LGVQRP-IIVVGNKVDLLP-QDSAGYLENVR 212
Query: 357 --WVRHRAKAGGA-PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
R ++G + + V L+SA GV L+ I + G RG+V+++G N GKST
Sbjct: 213 QCLTRSVIESGFSRNNIKHVSLISASTGYGVEELITKIHNVWGTRGDVYLVGCTNVGKST 272
Query: 414 LINTFAKKEGVKV------SKLTEAPIPGTTLGILRIGGILPAKAKLY 455
L N + + KV K T +P PGTT+ +L+ + P+ +L+
Sbjct: 273 LFNALLRSDLCKVQATDLIQKATASPWPGTTIRMLKFPILRPSDHRLF 320
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 14/212 (6%)
Query: 417 TFAKKEG-----VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
TF K++G V++ ++AP+P TL I YDTPG++ P + L
Sbjct: 362 TFEKEKGELFDHFSVTQRSDAPLPIFTLNEKNEKYI--NSKWCYDTPGVVQPDQILDLLT 419
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
+E + ++ ++PR Y +K G + +GGL RLD ++I V ++AS + + +
Sbjct: 420 TEEIVLTVPKQTIRPRIYLLKRGMTLLLGGLGRLDFVDGP-DSIRVILYASNMLPTIICQ 478
Query: 532 IENADEIWKNHVGIR-LQPPIG-QDRASELGTWKD-RKLKVSGT-SWDVNGIDIAAAGLG 587
+A +++ +G L P G Q+R + + + V GT + DI + G
Sbjct: 479 TLDAPALYEALLGTEFLAVPFGSQERLEKFPALECVPNILVHGTLEKHLTVCDILLSSAG 538
Query: 588 WFSLGL--KGEASLTLWTYDGIEITLREPLVL 617
W + L EA WT + +R+P +L
Sbjct: 539 WIGVNLPKNSEAIFHAWTPKKRGVYIRQPALL 570
>gi|145345515|ref|XP_001417253.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577480|gb|ABO95546.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 401
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 50/271 (18%)
Query: 235 AREAQKEKGEVTVCARCHSLRN-------YGQVKNEVAENLI-PDFDFDRVIATRLMKPS 286
A +A ++ +CARC +L N GQ + A LI P D++ R K
Sbjct: 25 ATKAVHRHYDMMLCARCAALSNGKFVNAVEGQGGLKAAPGLITPKQLRDQLKPIREKK-- 82
Query: 287 GNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP 346
+VV VVD DF G F KK+ + + +LV TKVDLL
Sbjct: 83 -----ALVVKVVDVTDFHGSF--------LKKVRDVVGGNPI-------LLVVTKVDLLD 122
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRN-LLAFIKELAGPRGNVWVIG 405
S+ L WV A+ L G+ LVS+RK G+R+ +L ++E G +V+V+G
Sbjct: 123 SKTDLDALVEWVGREAETRRL-SLAGIALVSSRKGSGMRDAVLQMMRERNG--RDVYVLG 179
Query: 406 AQNAGKSTLI-----------NTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKL 454
A N GKS+ I N FA + + V+ + +PGTTLG++ + K L
Sbjct: 180 AANVGKSSFIRAAMDELRSAGNYFAPSKRLPVA----SAMPGTTLGVIPLKA-FEGKGIL 234
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
+DTPGL H ++ L D+ +++ L+
Sbjct: 235 FDTPGLFLHHRLNSLLGPDDLSTMKLGASLK 265
>gi|322799594|gb|EFZ20872.1| hypothetical protein SINV_10706 [Solenopsis invicta]
Length = 778
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 120/256 (46%), Gaps = 51/256 (19%)
Query: 232 KKKAREAQKEKGEVTVCARCHSLRNYGQ-VKNEVAENLIPDFDFDRVIATRLMKPSGNAN 290
K+ RE Q + +C RCH ++ Y ++ +V+ + P+ +VI T+
Sbjct: 299 KRSERELQ-----IMICQRCHFMQYYNTTLEVKVSADEYPELL--KVIKTK--------- 342
Query: 291 AGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP--SQ 348
V+++VD DF S++ ++ ++ L P V VG K+DLLP S+
Sbjct: 343 KCAVILMVDLTDFPC--------SIWPEI-----NSVLHPYTPVFV-VGNKIDLLPQDSK 388
Query: 349 VSPTRLDRWVRHRAKAGGAPK---LNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIG 405
T + + G K + V LVSA+ G+ L+ + ++ +G+V+VIG
Sbjct: 389 HFFTHIKECLLKSVATGTGIKKENIKHVALVSAKTGYGIEELINKLHKIWKYKGDVYVIG 448
Query: 406 AQNAGKSTLINTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPG 459
N GKS+L N + + K V + T +P PGTTL +L+ + P + +LY
Sbjct: 449 CTNVGKSSLFNALLQSDYCKVQAVDLVQRATISPWPGTTLNLLKFPILNPLRWRLY---- 504
Query: 460 LLHPHLMSMRLNRDEQ 475
L ++RL +++Q
Sbjct: 505 -----LRTLRLQKEQQ 515
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
YDTPG + P + L E V +K + PRT+ + Q + +GG+ RLD + +
Sbjct: 587 YDTPGTIQPDQVLDLLTTQELLSVLPKKIISPRTFVLHVNQTIFLGGIGRLDYIEGN-HF 645
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIR--LQPPIGQDRASELGTWKDRKLKVSGT 572
I T+++S + + L + E+AD ++ + + P DR + ++++V+G
Sbjct: 646 IRCTIFSSSELPVTLTRTEDADSVYNELLETEAFVVPENNPDRLKHWPALESKEMEVTGV 705
Query: 573 SWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLVLDRAPFL 623
+ + DI + GW ++ K + L W+ G + LR P +L ++ L
Sbjct: 706 GKNESIGDIVLSSAGWIAITAKEADRVLLRAWSPQGRGLYLRIPALLKKSVVL 758
>gi|401406986|ref|XP_003882942.1| hypothetical protein NCLIV_026980 [Neospora caninum Liverpool]
gi|325117358|emb|CBZ52910.1| hypothetical protein NCLIV_026980 [Neospora caninum Liverpool]
Length = 895
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 26/267 (9%)
Query: 370 LNGVYLVSARKDLGVRNLLAFIKELAGPRGN-VWVIGAQNAGKSTLINTFAKK------- 421
+ ++++S + GV +L+ + + A R V+VIGA NAGKS+ +N K
Sbjct: 566 VKNIFMISNKSGAGVSHLINAVGQEAIRRKRPVYVIGAANAGKSSFLNKILAKATREPES 625
Query: 422 ----------EGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLN 471
+G K + + +PGTTL + + ++ K K+ DTPG+ + L
Sbjct: 626 TPGPLQKPQLKGAKAAAAASSAVPGTTLDFIPL--VVNGKWKVIDTPGIFLKGSYANLLT 683
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDL--DQASVETIYVTVWASPNVSLHL 529
++E + L + RV G V +GGL R++L D+ + +++
Sbjct: 684 QEELQAAVPSSALHLCSARVAEGHGVWLGGLARVELLGDRGCFFSFFLSRSLLIRPFTAA 743
Query: 530 GKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWF 589
G E E ++ RL PP +R L ++G W DI +GLGW
Sbjct: 744 GTPEGKLEAQRS----RLSPPFSPERRKALSPLVPEDFYIAGKGWQEAAADIVLSGLGWI 799
Query: 590 SLGLKGEASLTLWTYDGIEITLREPLV 616
S+ G + + D + + R LV
Sbjct: 800 SITGCGPLRVRVHVPDEVRVYQRPALV 826
>gi|170033577|ref|XP_001844653.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874621|gb|EDS38004.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 687
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 122/281 (43%), Gaps = 57/281 (20%)
Query: 239 QKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVV 298
K++ + T+C RCH L+NY N P+ D+ ++I++ + V ++
Sbjct: 209 HKKQLQSTICQRCHFLKNYNTAINVTVS---PE-DYVQMISS-IRDKRALVLLMVDLLDF 263
Query: 299 DCVDFDGMF----PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL 354
C + G+ PKR+ +++VG KVDLLP SP L
Sbjct: 264 PCSIWPGLSDILGPKRS-----------------------IIVVGNKVDLLPRD-SPGYL 299
Query: 355 D--RWVRHRAKAGGAPKLNG---VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNA 409
D R RA + N V LVSA GV L+ + + G RG+V+++G N
Sbjct: 300 DTIRDTLTRAIVSSGFERNNIRHVALVSAATGFGVEELITKLHNVWGSRGDVYLVGCTNV 359
Query: 410 GKSTLINTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHP 463
GKSTL N + K V + T P PGTTL +L+ + P+ +L+
Sbjct: 360 GKSTLFNALLASDLCKVQATDLVQRATACPWPGTTLRMLKFPILRPSDYRLF-------- 411
Query: 464 HLMSMRLNRDEQKMVE---IRKELQPRTYRVKGGQAV-HVG 500
L + RL + K +E +RK+ +T K + H+G
Sbjct: 412 -LRTKRLQSERVKQIEEEKLRKQQARQTGSTKFATLIGHIG 451
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 11/217 (5%)
Query: 408 NAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMS 467
+ G++ L KEG VS+ A P TL YDTPG++ P ++
Sbjct: 449 HIGQTFLKEKDPTKEGFSVSQRGTAQSPILTLN--EKSDTYANSKWCYDTPGVIQPDQIT 506
Query: 468 MRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSL 527
L DE ++ ++PR Y +K G ++ + GL RLD + T + +++SP++
Sbjct: 507 NLLTTDELLQTLPKQMIRPRAYLLKPGLSLFLAGLGRLDYLEGPPST-RILLYSSPSLPT 565
Query: 528 HLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRK-----LKVSGTSWDVNGIDIA 582
+ + A +I+ N +G G D + L W K L ++ DI
Sbjct: 566 LICETTAATQIYANLLGTEFLQIPGPD-PNRLSRWPALKPSPDILLTGVQEKHISVADIL 624
Query: 583 AAGLGWFSLGLKG--EASLTLWTYDGIEITLREPLVL 617
+ GW ++ L EA+ WT + I +R+P +L
Sbjct: 625 LSSGGWIAVNLPPGEEAAFRAWTPEARGIYVRQPALL 661
>gi|403222202|dbj|BAM40334.1| conserved hypothetical protein [Theileria orientalis strain
Shintoku]
Length = 796
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQP 486
+K+T + +PGTTLG+L I L K+YDTPG+ P+ L+ D+ K V I
Sbjct: 599 TKVTSSIVPGTTLGVLGIR--LGMGLKVYDTPGIFIPNSFISYLDNDQLKEVIINNTCSN 656
Query: 487 RTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV-GI 545
++ R+ GQ + + R+D+ +V + S + L + K +
Sbjct: 657 KSIRITKGQTLLIDKYARIDVTAG--RDFFVKCYLSDKLKLFVKKTHRVPRFLEREFPNA 714
Query: 546 RL-QPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY 604
+L P D + T K + +SG WD D+ GLG+ +LG L T
Sbjct: 715 QLWYPKASLDSCTADTTPKKFNIVLSG--WDSATCDLCIKGLGFLTLGGALRILFDLHTR 772
Query: 605 DGIEITLREPL 615
D IE++LR P+
Sbjct: 773 DSIELSLRTPM 783
>gi|257125887|ref|YP_003164001.1| HSR1-like GTP-binding protein [Leptotrichia buccalis C-1013-b]
gi|257049826|gb|ACV39010.1| GTP-binding protein HSR1-related [Leptotrichia buccalis C-1013-b]
Length = 373
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 140/303 (46%), Gaps = 49/303 (16%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDF---DFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
+C RC ++NYG ENL+ +F D+ + + + K + +++ + D +DF
Sbjct: 36 LCQRCFKIKNYG-------ENLVNNFSKEDYLKEVNESVKK------SDIILPIFDIIDF 82
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHR-A 362
+G F + L+ +D + +++ K+DLLP + PT + WV+ R A
Sbjct: 83 EGSFTEEI-------LDYLRD--------YRSIILINKIDLLPDFIHPTEISNWVKDRLA 127
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLAFIKEL-AGPRGNVWVIGAQNAGKSTLINTFAKK 421
+ P + + +SA+ GV ++ IK + + V+G N GKS++IN
Sbjct: 128 EEDIVP--DDIAFISAKNRYGVNGIIRKIKNIFQNKKVKATVLGVSNVGKSSVINLLLGN 185
Query: 422 EGVKVSKLTEAPIPGTTLGILRIGGILP-AKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+K+T + GTTL I +P ++ + DTPGL+ +S ++ + +
Sbjct: 186 -----NKITTSKYSGTTLK--SINNRIPNSEITIIDTPGLIPDGRISDLISVENGLKLVP 238
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRL-----DLDQASVETIYVTVWASPNVSLHLGKIENA 535
E+ +T++++ Q R +L ++ + I+ + +AS +V H+ + E
Sbjct: 239 AGEISRKTFKLEENQVFMFDVFCRFKILENELLKSGSKPIF-SAYASKSVKFHVAREERV 297
Query: 536 DEI 538
+ +
Sbjct: 298 ETL 300
>gi|307177178|gb|EFN66411.1| Uncharacterized protein C4orf14 [Camponotus floridanus]
Length = 697
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 45/280 (16%)
Query: 245 VTVCARCHSLRNYGQ-VKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
V VC RCH ++ Y ++ +V+ + P +L+K V++MV D DF
Sbjct: 210 VMVCQRCHFMKYYNTTLEVKVSADEYP----------KLLKVIKTKKCAVILMV-DLTDF 258
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP---TRLDRWVRH 360
S++ ++ + L + +VG KVDLLP Q SP T + +
Sbjct: 259 PC--------SIWPEINS------VLHPLTPVFVVGNKVDLLP-QDSPHFFTHVKECLSK 303
Query: 361 RAKAGGAPK--LNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF 418
+ G K + + L+SA+ G+ L+ + L +G+V+VIG N GKS+L N
Sbjct: 304 AVENAGIKKEKIRHIELISAKTGYGIEELINKLHSLWKYKGDVYVIGCTNVGKSSLFNAL 363
Query: 419 AKKEGVKV------SKLTEAPIPGTTLGILRIGGILPAKAKLY-DTPGLLHPHLMSMRLN 471
+ + KV + T +P PGTTL +L+ + P + +LY T L++ N
Sbjct: 364 LQSDYCKVQAVDLIQRATISPWPGTTLNLLKFPILNPLRWRLYMRTMRLINERQFKHDEN 423
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQAS 511
R + M + ++L+ T + H+G R L S
Sbjct: 424 RIKNDMFKTTRKLKYATLQ------SHIGMTFRSKLTLKS 457
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 23/191 (12%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
YDTPG + P + L E V R+ + PRT+ ++ Q + +GG+ RLD +
Sbjct: 488 YDTPGTIQPEQILDLLTTPELLSVLPRRIISPRTFILQTDQTIFLGGIGRLDYLEGD-GF 546
Query: 515 IYVTVWASPNVSLHLGKIENADEIW-------------KNHVGIRLQPPIGQDRASELGT 561
I T+++S + + + +AD I+ N ++ P +G +G
Sbjct: 547 IRCTIFSSRQLPITVTNTADADNIYDELLKTEAFVVPESNPERLKHWPALGSKEMEVIGI 606
Query: 562 WK-----DRKLKVSGTSWDVNGIDIAAA--GLGWFSL--GLKGEASLTLWTYDGIEITLR 612
+ D L GT +++ A +GW ++ G SL WT G + LR
Sbjct: 607 GRNESAADVVLSSGGTYLRFVILNLMKAIIVIGWIAIAGGQNVRLSLKAWTPQGRGLHLR 666
Query: 613 EPLVLDRAPFL 623
P +L ++ L
Sbjct: 667 TPALLSKSVVL 677
>gi|407852124|gb|EKG05773.1| hypothetical protein TCSYLVIO_003151 [Trypanosoma cruzi]
Length = 917
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 176/461 (38%), Gaps = 111/461 (24%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVD 299
K++ + VC RCH+L N G V+ PDF +++ A R K VVV+VVD
Sbjct: 377 KDQNKPFVCHRCHALENLG-VEGRRQIWSAPDFT-EKLRALREKK-------CVVVLVVD 427
Query: 300 CVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ----------- 348
DF G D L +++ K+D + ++
Sbjct: 428 IADFPGTM--------------VYDLPGLISMNNDVIIAVNKMDCVRNRSFNYSNKDRAI 473
Query: 349 ----VSPTRLDRWVRHRAKAGGAPK--LNGVYLVSARKDLGVRNLLAFIKE-----LAGP 397
V+ + RWV A G P+ + V +SA++ V L+A ++E L P
Sbjct: 474 AARLVTERYVRRWVTGIALQFGLPRHQIKDVIPISAKRGWNVDKLIAAVEEASNLNLTRP 533
Query: 398 RGNV--WVIGAQNAGKSTLINTFAKKEGV------------------------------- 424
+ + +G N GKS++IN A K V
Sbjct: 534 IKPMPTYFVGVANVGKSSVINAIAHKLYVPVPPHPESRKVYYTRKAKDGTEAVFWRWYTP 593
Query: 425 -----------------KVSKL-TEAPIPGTTL--GILRIG---GILPAKAKLYDTPGLL 461
K SKL T + +PGTT+ +R+ G A L+DTPGLL
Sbjct: 594 PNVNQAEMIDIPSRHDKKASKLLTVSSLPGTTVEANAVRVSLTKGAPGDAAYLFDTPGLL 653
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWA 521
S L + + IRK P+ + + G + + GL +D+ + + + V+
Sbjct: 654 PHWHHSSPLTLLQMRRTLIRKYRNPQCFILMPGNTLFLSGLAAIDVVKGTSRGMLFMVYT 713
Query: 522 SPNVSLHLGKIENADEIWKNHVGIRLQPP-----IGQDRASELGTWKDRKLKVSGTSWDV 576
S V + E +DE W++ +G L PP +G R +E + +
Sbjct: 714 SQKVCNAIIATERSDEFWQDQLGKALDPPGSLEQLGDLRLTESKCY---LFECYPRHRRR 770
Query: 577 NGIDIAAAGLGW--FSLGLKGEASLTLWTYDGIEITLREPL 615
D+ G+GW F + + L + T G+ +REPL
Sbjct: 771 PKADVYVCGIGWTSFCVNETCDVVLRVRTLPGVIHGVREPL 811
>gi|307196380|gb|EFN77969.1| Uncharacterized protein C4orf14-like protein [Harpegnathos
saltator]
Length = 621
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 123/268 (45%), Gaps = 60/268 (22%)
Query: 242 KGEVTVCARCHSLRNYG---QVK---NEVAENLIPDFDFDRVIATRLMKPSGNANAGVVV 295
K + +C RCH ++ Y +VK +E AE L +VI T+ V+
Sbjct: 147 KLRLMICQRCHFMKYYNAMLEVKVSPDEFAELL-------KVIKTK---------KCAVI 190
Query: 296 MVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP---T 352
++VD DF S++ +++ + + +VG K+DLLP Q SP T
Sbjct: 191 LMVDLTDFPC--------SIWPEIKSVLHPYTM------VFVVGNKIDLLP-QDSPEFFT 235
Query: 353 RLDRWVRHRAKAGGAPK--LNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
+ + + G K + V LVSA+ G+ L+ + L +G+V+VIG N G
Sbjct: 236 HVKDCLLKTVENTGINKNFIKYVGLVSAKTGYGIEQLINKLHALWKYKGDVYVIGCTNVG 295
Query: 411 KSTLINTFAKKEGVKV------SKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPH 464
KS+L N + + KV + T +P PGTTL +L+ + P + +LY
Sbjct: 296 KSSLFNVLLQSDYCKVQAADLIQRATISPWPGTTLNLLKFPILNPQRWRLY--------- 346
Query: 465 LMSMRLNRDEQKMVEIRKELQPRTYRVK 492
L MRL ++++ E++ E Q R + K
Sbjct: 347 LRRMRLQQEQK---ELQTEEQTRVEQFK 371
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 5/170 (2%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
YDTPG + P + L E V +K + PRT+ + Q++ + G+ RLD + +
Sbjct: 430 YDTPGTIQPDQVLDLLTTVELLSVLPKKIIAPRTFILYPDQSIFLAGIGRLDYLKGNY-F 488
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIR--LQPPIGQDRASELGTWKDRKLKVSGT 572
I T++AS + + + +ADEI+ + + P DR ++++V G
Sbjct: 489 IRCTIFASNELPITITLSADADEIYNELLNTEAFVVPENNPDRLKYWPALGSKEMEVIGI 548
Query: 573 SWDVNGIDIAAAGLGWFSL-GLKGE-ASLTLWTYDGIEITLREPLVLDRA 620
+++ D+ + GW ++ G G+ SL W+ G + LR P +L ++
Sbjct: 549 GKNMSVADVVISSAGWMAISGEHGDHVSLRAWSPQGRGLHLRTPALLRKS 598
>gi|125808464|ref|XP_001360762.1| GA10638 [Drosophila pseudoobscura pseudoobscura]
gi|54635934|gb|EAL25337.1| GA10638 [Drosophila pseudoobscura pseudoobscura]
Length = 623
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 141/323 (43%), Gaps = 46/323 (14%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVD 299
+++ + +C RCH L +Y N + +P + I +R+ + + +++VD
Sbjct: 137 QQELKTIICQRCHFLNHY----NIALDVDVPPSSYVDTI-SRIQD-----HFALAIVMVD 186
Query: 300 CVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
+DF S++ ++ L K P + LVG KVDLLP S + L+ V+
Sbjct: 187 LLDF--------PSSIWPGMQHV-----LGTKRP-VFLVGNKVDLLPRD-SNSYLNH-VK 230
Query: 360 HR-----AKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
H + GG LN V L+SA+ G+ L+ + + +G+V+++G N GKS
Sbjct: 231 HCLQRSFIQHGGGDGLNIKNVSLISAKTGYGIEELITQLHKTWSYKGDVYLLGCTNVGKS 290
Query: 413 TLINTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
TL N + + V K T P PGTTL +LR P+ +++Y L
Sbjct: 291 TLFNILLNSDYCRPEASELVRKATTCPWPGTTLELLRFPIFRPSDSRVYQR----FKRLF 346
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
S R+ R + ++R+E +T V Q V G D + ++ + P S
Sbjct: 347 SERVER--ASLDKLRREQAQKTGAVAAAQPVSQVG-RSFDRREVVNDSFSMAAGTQPITS 403
Query: 527 LHLGKIENADEIWKNHVGIRLQP 549
L+ + E + W +QP
Sbjct: 404 LNERRAEYREARWVYDTPGVMQP 426
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLD-LDQASV 512
+YDTPG++ P ++ L +E ++ ++PR +R++ + + GL R+D LD +
Sbjct: 417 VYDTPGVMQPDQLTALLTAEELAQLQPTTMIRPRAFRLRPKMTLLLAGLARMDILDLSGS 476
Query: 513 ETIY----VTVWASPNVSLHLGKIENADEIWKNHVGIRLQ--PPIGQDRASELGTW---- 562
E Y V V+AS N+ + + A+ ++K ++G P D + L W
Sbjct: 477 EKHYDWLKVFVFASQNLPVMIADTLQAETVYKRYLGTPFLGIPSASGDLEARLKRWPGLH 536
Query: 563 -KDRKLKV--SGTSWDVNGIDIAAAGLGWFSLGL--KGEASLTLWTYDGIEITLREPLVL 617
KD+ + V SG DI + GW L L E SL +WT I +R P V+
Sbjct: 537 CKDKDIVVSKSGRHEGRLNCDITLSSAGWLGLLLPDNSECSLRVWTPHAAGIYVRTPAVI 596
Query: 618 DRA 620
A
Sbjct: 597 PLA 599
>gi|320165317|gb|EFW42216.1| nitric-oxide synthase [Capsaspora owczarzaki ATCC 30864]
Length = 819
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 3/130 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
L+DTPG++ PH RL+ + V K + P+ +R+ GQ V +GGL RLD+ ++
Sbjct: 522 LFDTPGIMSPHQSLHRLSAADISAVIPTKLIVPQVFRLNPGQCVFIGGLGRLDVLSSADG 581
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIR-LQPPIGQDRASELGTWKDRKLKVSGT 572
+ VTV+ S V LH +I NA++ ++ H+G L PP + SEL + + SG
Sbjct: 582 AVLVTVFVSNTVKLHATRISNAEDFYQRHLGTPLLSPPFFNE--SELAARRQARKSDSGV 639
Query: 573 SWDVNGIDIA 582
+ ++
Sbjct: 640 DESSTPVSVS 649
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 90/207 (43%), Gaps = 36/207 (17%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RCH L + Q L+P D + P + A +V VVD F
Sbjct: 236 ICKRCHQLTHNNQ--------LLP-VQIDPAHFQEQLAPIRSKEA-FIVHVVDVTTFPC- 284
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPS---QVSPTR--LDRWVRHR 361
S LEE + ++ VG+K DLLP +S R L R + +
Sbjct: 285 -------SSLPNLEEYVGSNQ------RIFFVGSKADLLPGYDKHLSRIRQWLSRLIINH 331
Query: 362 AKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK 421
+ GV+LVS K G LL I+ L G R +V+V+G N GKSTL+N K
Sbjct: 332 YSPAVRSHIVGVHLVSGMKGTGCWTLLDAIQRLRGGR-DVYVVGCANVGKSTLVNNLLDK 390
Query: 422 EGV------KVSKLTEAPIPGTTLGIL 442
V V+ +T + +PGTT+G+L
Sbjct: 391 LRVLNESRSPVTSITTSGVPGTTIGLL 417
>gi|195150909|ref|XP_002016392.1| GL11551 [Drosophila persimilis]
gi|194110239|gb|EDW32282.1| GL11551 [Drosophila persimilis]
Length = 623
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 141/323 (43%), Gaps = 46/323 (14%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVD 299
+++ + +C RCH L +Y N + +P + I +R+ + + +++VD
Sbjct: 137 QQELKTIICQRCHFLNHY----NIALDVDVPPSSYVDTI-SRIQD-----HFALAIVMVD 186
Query: 300 CVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
+DF S++ ++ L K P + LVG KVDLLP S + L+ V+
Sbjct: 187 LLDF--------PSSIWPGMQHV-----LGTKRP-VFLVGNKVDLLPRD-SNSYLNH-VK 230
Query: 360 HR-----AKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKS 412
H + GG LN V L+SA+ G+ L+ + + +G+V+++G N GKS
Sbjct: 231 HCLQRSFIQHGGGDGLNIKNVSLISAKTGYGIEELITQLHKTWSYKGDVYLLGCTNVGKS 290
Query: 413 TLINTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLM 466
TL N + + V K T P PGTTL +LR P+ +++Y L
Sbjct: 291 TLFNILLNSDYCRPEASELVRKATTCPWPGTTLELLRFPIFRPSDSRVYQR----FKRLF 346
Query: 467 SMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVS 526
S R+ R + ++R+E +T V Q V G D + ++ + P S
Sbjct: 347 SERVER--ASLDKLRREQAQKTGAVAAAQPVSQVG-RSFDRREVVNDSFSMAAGTQPITS 403
Query: 527 LHLGKIENADEIWKNHVGIRLQP 549
L+ + E + W +QP
Sbjct: 404 LNERRAEYREARWVYDTPGVMQP 426
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 16/183 (8%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLD-LDQASV 512
+YDTPG++ P ++ L +E ++ ++PR +R++ + + GL R+D LD +
Sbjct: 417 VYDTPGVMQPDQLTALLTAEELAQLQPTTMIRPRAFRLRPKMTLLLAGLARMDILDLSGS 476
Query: 513 ETIY----VTVWASPNVSLHLGKIENADEIWKNHVGIRLQ--PPIGQDRASELGTW---- 562
E Y V V+AS N+ + + A+ ++K ++G P D + L W
Sbjct: 477 EKHYDWLKVFVFASQNLPVMIADTLQAETVYKRYLGTPFLGIPSASGDLEARLKRWPGLH 536
Query: 563 ---KDRKLKVSGTSWDVNGIDIAAAGLGWFSLGL--KGEASLTLWTYDGIEITLREPLVL 617
KD + SG DI + GW L L E SL +WT I +R P V+
Sbjct: 537 CKEKDIVVSKSGRHEGRLNCDITLSSAGWLGLLLPDNSECSLRVWTPHAAGIYVRTPAVI 596
Query: 618 DRA 620
A
Sbjct: 597 PLA 599
>gi|432961268|ref|XP_004086582.1| PREDICTED: nitric oxide-associated protein 1-like [Oryzias latipes]
Length = 645
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 20/153 (13%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRA----KAGGAPKLNGVYLVSARKDLGVRNLLAF 390
+V++G K+DLLP SP L R R + +AG ++ ++L+SA+ GV L++
Sbjct: 216 IVVLGNKIDLLPGD-SPNYLQRLKRQLSGYCQQAGFGSQVTDIHLISAKTGYGVEALISS 274
Query: 391 IKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK------VSKLTEAPIPGTTLGILRI 444
++ +G+V+++G+ NAGKSTL NT + + K + K T +P PGTTL +L+
Sbjct: 275 LQRSWKYKGDVYLVGSANAGKSTLFNTLLESDYCKSRASDVIHKATISPWPGTTLNLLKF 334
Query: 445 GGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKM 477
I P +++ RL EQ+M
Sbjct: 335 PIINPTPYRMFRR---------QKRLKEAEQQM 358
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
LYDTPG++ H + L E ++V + + PRT+ ++ G ++ VG L R+D Q +
Sbjct: 435 LYDTPGIIKEHDILQLLQEKEVQLVVPTRAVVPRTFVLQPGMSLFVGALFRIDFLQGE-K 493
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL--QPPIGQDRASELGTWKDRKLKVSG 571
+ + ++ AS V +H+ ++ AD I++ H G L P G +R + V G
Sbjct: 494 SCWFSIMASNLVPVHVTSLDKADSIYEKHAGHVLLGVPTGGSERMKAFPALVHQDFSVEG 553
Query: 572 TSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY--DGIEITLREPLVL 617
+ +D+ + GW ++ L L + G + LR P +L
Sbjct: 554 GGYLEAAVDVKLSSAGWVAVTAVEGQQLQLRVHGPPGAGLGLRTPPLL 601
>gi|71666593|ref|XP_820254.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70885591|gb|EAN98403.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 917
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 176/461 (38%), Gaps = 111/461 (24%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVD 299
K++ + VC RCH+L N G V+ PDF +++ A R K VVV+VVD
Sbjct: 377 KDQNKPFVCHRCHALENLG-VEGRRQIWSAPDFT-EKLRALREKK-------CVVVLVVD 427
Query: 300 CVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ----------- 348
DF G D L +++ K+D + ++
Sbjct: 428 IADFPGTM--------------VYDLPGLISMNNDVIIAVNKMDCVRNRSFNYSNKDRAI 473
Query: 349 ----VSPTRLDRWVRHRAKAGGAPK--LNGVYLVSARKDLGVRNLLAFIKE-----LAGP 397
V+ + RWV A G P+ + V +SA++ V L+A ++E L P
Sbjct: 474 AARLVTERYVRRWVIGIALQFGLPRHQIKDVVPISAKRGWNVDKLIAAVEEASNLNLTRP 533
Query: 398 RGNV--WVIGAQNAGKSTLINTFAKKEGV------------------------------- 424
+ + +G N GKS++IN A K V
Sbjct: 534 IKPMPTYFVGVANVGKSSVINAIAHKLYVPVPPHPESRKVYYTRKAKDGTEAVFWRWYTP 593
Query: 425 -----------------KVSKL-TEAPIPGTTL--GILRIG---GILPAKAKLYDTPGLL 461
K SKL T + +PGTT+ +R+ G A L+DTPGLL
Sbjct: 594 PNVNQAEMIDIPSRHDKKASKLLTVSSLPGTTVEANAVRVSLTKGAPGDAAYLFDTPGLL 653
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWA 521
S L + + IRK P+ + + G + + GL +D+ + + + V+
Sbjct: 654 PHWHHSSPLTLLQMRRTLIRKYRNPQCFILMPGNTLFLSGLAAIDVVKGTSRGMLFMVYT 713
Query: 522 SPNVSLHLGKIENADEIWKNHVGIRLQPP-----IGQDRASELGTWKDRKLKVSGTSWDV 576
S V + E +DE W++ +G L PP +G R +E + +
Sbjct: 714 SQKVCNAIIATERSDEFWQDQLGKALDPPGSLEQLGDLRLTESKCY---LFECYPRHRRR 770
Query: 577 NGIDIAAAGLGW--FSLGLKGEASLTLWTYDGIEITLREPL 615
D+ G+GW F + + L + T G+ +REPL
Sbjct: 771 PKADVYVCGIGWTSFCVNETCDVVLRVRTLPGVIHGVREPL 811
>gi|348511900|ref|XP_003443481.1| PREDICTED: uncharacterized protein C4orf14 homolog [Oreochromis
niloticus]
Length = 630
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 9/130 (6%)
Query: 335 LVLVGTKVDLLP--SQVSPTRLDRWVRHRAK-AGGAPKLNGVYLVSARKDLGVRNLLAFI 391
+V++G K+DLLP SQ RL R + K AG ++ V+L+SA+ G+ L++ +
Sbjct: 197 IVVLGNKIDLLPGDSQNYLQRLKRQLSQYCKDAGFGDQVTDVHLISAKTGYGIEELISSL 256
Query: 392 KELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK------VSKLTEAPIPGTTLGILRIG 445
+ +G+V+++G+ NAGKSTL NT + + K + K T +P PGTTL +L+
Sbjct: 257 QRSWKYKGDVYLVGSANAGKSTLFNTLLESDYCKSRASNVIHKATISPWPGTTLNLLKFP 316
Query: 446 GILPAKAKLY 455
I P +++
Sbjct: 317 IINPTPYRMF 326
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
LYDTPG++ + L+ E ++V + + PRT+ +K G ++ VG L R+D Q +
Sbjct: 418 LYDTPGIMKELDILNLLHEQEVRLVVPTQAIVPRTFVLKPGTSLFVGALARIDFLQGE-K 476
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL--QPPIGQDRASELGTWKDRKLKVSG 571
+ + +V AS V +H+ +E AD I++ H G L P G +R E ++ + G
Sbjct: 477 SCWFSVVASDRVPVHITSLEKADSIYEKHGGHMLLGVPVGGSERMKEFPALVPQEFSLEG 536
Query: 572 TSWDVNGIDIAAAGLGWFSL 591
+ DI + GW ++
Sbjct: 537 RGYLEAAADIKLSSAGWVAV 556
>gi|195429551|ref|XP_002062821.1| GK19491 [Drosophila willistoni]
gi|194158906|gb|EDW73807.1| GK19491 [Drosophila willistoni]
Length = 644
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 43/225 (19%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
VC RCH L++Y N + +P + I +R+ + +++VD +DF
Sbjct: 162 VCKRCHFLKHY----NLALDVEVPSSSYVDTI-SRIQD-----KFALAIVLVDLLDF--- 208
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP-------SQVSPTRLDRWVR 359
P + + L + + LVG KVDLLP + V +++
Sbjct: 209 -PSSIWPGMLRVLGSKR----------PVFLVGNKVDLLPRDSNSYMNHVRSCLTQEFIK 257
Query: 360 HRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
H GG +N V L+SA+ G+ L+ + ++ +G+V+++G N GKSTL N
Sbjct: 258 H----GGGQGMNIKHVSLISAKTGYGIEELITQLHKIWAYKGDVYLLGCTNVGKSTLFNI 313
Query: 418 FAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
+ + V+K T P PGTTL +LR + P+ ++Y
Sbjct: 314 LLNSDYCRPEASDLVAKATTCPWPGTTLKLLRFPILRPSDLRVYQ 358
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 29/236 (12%)
Query: 403 VIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLH 462
V+G ++ + + FA GVK P TTL R +YDTPG++
Sbjct: 396 VVGRTFDRRNVVNDVFAMSSGVK---------PVTTLNERR--AEYREARWVYDTPGVMQ 444
Query: 463 PHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDL-----DQASVETIYV 517
P ++ L +E +++ +K ++PR +RV+ ++ +GGL R DL D+ +E + V
Sbjct: 445 PDQLTPLLTTEELTLLQPKKMIRPRAFRVRPNMSLMLGGLARFDLLDCLSDERQLEYLKV 504
Query: 518 TVWASPNVSLHLGKIENADEIWKNHVGIRL--QPPIGQDR--ASELGTW-----KDRKLK 568
V+AS + L + +A+ +++ ++G L P GQD A + W +D +
Sbjct: 505 IVFASEELPLLIVDTAHAETVYQRYLGTELLGLPISGQDAGDAERIKRWPGLQCQDTDIV 564
Query: 569 VSGTSWDVNGI--DIAAAGLGWFSLGL--KGEASLTLWTYDGIEITLREPLVLDRA 620
++ + +V + DI + GW L + E L WT + +R+P ++ A
Sbjct: 565 ITNSERNVGKLSCDITLSSAGWIGLLMPSNSECLLRAWTPLAAGVYVRKPALVPLA 620
>gi|194753380|ref|XP_001958990.1| GF12654 [Drosophila ananassae]
gi|190620288|gb|EDV35812.1| GF12654 [Drosophila ananassae]
Length = 566
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 16/183 (8%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDL-----D 508
+YDTPG++HP ++ L +E ++ K ++PR +R++ ++ +GGL R+DL
Sbjct: 360 VYDTPGVMHPDQLTPLLTAEELVQLQPTKMIRPRAFRLRPQMSIFLGGLARMDLLELRSY 419
Query: 509 QASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL--QPPIGQDRASELGTWKDRK 566
+ + I V V+AS ++ + + + AD I+K ++G P G D + L W +
Sbjct: 420 KNQFDWIKVFVFASEHLPVLISDTQEADNIYKRYLGTPYLGVPTAGGDLEARLHRWPGLQ 479
Query: 567 LK-------VSGTSWDVNGIDIAAAGLGWFSLGLKG--EASLTLWTYDGIEITLREPLVL 617
K G S DI + GW L L G E L +WT + I R+P ++
Sbjct: 480 AKEDEIVVESKGRSEGRLNCDITLSSAGWMGLLLPGHSECRLRVWTPNSTGIYKRDPALI 539
Query: 618 DRA 620
A
Sbjct: 540 PLA 542
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 35/223 (15%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
C RCH L NY N+ D + + + A + +++VD +DF
Sbjct: 84 HTITCQRCHFLHNY---------NIALDVEVTPASYVETISQIQDKYA-LAIVIVDLLDF 133
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP--SQVSPTRLDRWVRHR 361
S++ ++ L K P + LVG KVDLLP S + + +R+
Sbjct: 134 --------PSSIWPGMQNV-----LGTKRP-IFLVGNKVDLLPRDSNIYLQHVKECLRNE 179
Query: 362 -AKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF 418
+ GG +LN V L+SA+ G+ L+ +++ +G+V+++G N GKS+L N
Sbjct: 180 FVRYGGGNELNIKNVSLISAKTGYGIEELITQLQKTWAYKGDVYLLGCTNVGKSSLFNIL 239
Query: 419 AKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
+ + V + T P PGTTL +LR + P+ ++Y
Sbjct: 240 LNSDYCRPEASDLVRQATTCPWPGTTLKLLRFPILRPSNDRIY 282
>gi|157117920|ref|XP_001653101.1| hypothetical protein AaeL_AAEL008095 [Aedes aegypti]
gi|108875942|gb|EAT40167.1| AAEL008095-PA [Aedes aegypti]
Length = 689
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 102/227 (44%), Gaps = 36/227 (15%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVD 299
K++ + ++C RCH L+NY N PD D+ +I++ K + ++
Sbjct: 213 KQQLQTSICQRCHFLKNYNTAINVTVS---PD-DYVEMISSIRDKKALVLLLVDLLD--- 265
Query: 300 CVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
FP S++ L E + +++VG KVDLLP P LD
Sbjct: 266 -------FPC----SIWPGLSEILGPDR------SIIVVGNKVDLLPRDC-PGYLDNIRN 307
Query: 360 HRAKA---GGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
+ K G K N V L+SA GV L+ I + G RG+V+++G N GKS+L
Sbjct: 308 NLTKTFLEAGFTKNNIKHVSLISATTGYGVEQLITKIHNVWGTRGDVYLVGCTNVGKSSL 367
Query: 415 INTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
N + + K V + T P PGTTL +L+ + P+ +LY
Sbjct: 368 FNALLRSDLCKVKASDLVQRATACPWPGTTLKMLKFPILRPSDHRLY 414
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
YDTPG++ P ++ L DE + ++ ++PR Y +K G + + GL RLD + E+
Sbjct: 497 YDTPGVVQPEQITNLLTTDELLLTLPKQMIRPRAYLMKTGLTLFLAGLGRLDYIEGP-ES 555
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIRL--QPPIGQDRASELGTWKDRK----LK 568
V ++ASPN+ + +A EI++N +G P DR L W + +
Sbjct: 556 TRVLLYASPNLPTLICDTAHAHEIYQNLLGTEYLRVPRADPDR---LAKWPALQAGPDIL 612
Query: 569 VSGTSWDVNGIDIAAAGLGWFSLGLKG--EASLTLWTYDGIEITLREPLVL 617
+ G ++ D+ + GW ++ L EA WT + I +R+P +L
Sbjct: 613 LYGEEKHISVADVVLSSAGWIAINLPADSEAVFRAWTPERRGIYVRQPALL 663
>gi|157117918|ref|XP_001653100.1| hypothetical protein AaeL_AAEL008086 [Aedes aegypti]
gi|108875941|gb|EAT40166.1| AAEL008086-PA [Aedes aegypti]
Length = 697
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 102/227 (44%), Gaps = 36/227 (15%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVD 299
K++ + ++C RCH L+NY N PD D+ +I++ K + ++
Sbjct: 213 KQQLQTSICQRCHFLKNYNTAINVTVS---PD-DYVEMISSIRDKKALVLLLVDLLD--- 265
Query: 300 CVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
FP S++ L E + +++VG KVDLLP P LD
Sbjct: 266 -------FPC----SIWPGLSEILGPDR------SIIVVGNKVDLLPRDC-PGYLDNIRN 307
Query: 360 HRAKA---GGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTL 414
+ K G K N V L+SA GV L+ I + G RG+V+++G N GKS+L
Sbjct: 308 NLTKTFLEAGFTKNNIKHVSLISATTGYGVEQLITKIHNVWGTRGDVYLVGCTNVGKSSL 367
Query: 415 INTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
N + + K V + T P PGTTL +L+ + P+ +LY
Sbjct: 368 FNALLRSDLCKVKASDLVQRATACPWPGTTLKMLKFPILRPSDHRLY 414
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
YDTPG++ P ++ L DE + ++ ++PR Y +K G + + GL RLD + E+
Sbjct: 497 YDTPGVVQPEQITNLLTTDELLLTLPKQMIRPRAYLMKTGLTLFLAGLGRLDYIEGP-ES 555
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIRL--QPPIGQDRASELGTWKDRK----LK 568
V ++ASPN+ + +A EI++N +G P DR L W + +
Sbjct: 556 TRVLLYASPNLPTLICDTAHAHEIYQNLLGTEYLRVPRADPDR---LAKWPALQAGPDIL 612
Query: 569 VSGTSWDVNGIDIAAAGLGWFSLGLK--GEASLTLWTYDGIEITLREPLVL 617
+ G ++ D+ + GW ++ L EA WT + I +R+P +L
Sbjct: 613 LYGEEKHISVADVVLSSAGWIAINLPADAEAVFRAWTPERRGIYVRQPALL 663
>gi|390354295|ref|XP_782008.3| PREDICTED: nitric oxide-associated protein 1-like
[Strongylocentrotus purpuratus]
Length = 924
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 38/222 (17%)
Query: 246 TVCARCHSLRNYGQVKNEVAENL-IPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFD 304
+VC RC + + A N+ +P + +I K + +V+++VD +DF
Sbjct: 442 SVCQRCFYI-----IHRHTALNVSVPQDSYSNII-----KAIRKNQSSLVILMVDLLDFP 491
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH---- 360
S+ K L++ ++ +V+VG K+D+LP P + R H
Sbjct: 492 C--------SIIKNLKDLIGSSR------SIVIVGNKLDVLPKD-EPKQERRLKDHLVSA 536
Query: 361 --RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF 418
A A K+ V L+SA+ GV NL+ I L +G+V+++G N GKSTL N F
Sbjct: 537 CVETGACDADKVMHVELISAKSGYGVENLITKILSLKTKKGDVYLLGTANVGKSTLFNRF 596
Query: 419 AKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKL 454
+ + K + + T + PGTTL +LR + P + ++
Sbjct: 597 LESDLCKAKASSLMGRATISQWPGTTLNLLRFPLLNPTRERM 638
>gi|28573544|ref|NP_611297.3| CG10914 [Drosophila melanogaster]
gi|17945519|gb|AAL48812.1| RE23670p [Drosophila melanogaster]
gi|28380737|gb|AAF57738.2| CG10914 [Drosophila melanogaster]
Length = 624
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 35/231 (15%)
Query: 236 REAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVV 295
R+ +++ + C RCH L +Y + V + P D + +R+ + +
Sbjct: 133 RDRTQQELQTITCKRCHFLNHYNIALDVV---VAPSTYVDTI--SRIQD-----KFALAI 182
Query: 296 MVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP--SQVSPTR 353
++VD +DF S++ ++ L K P + LVG KVDLLP S +
Sbjct: 183 VLVDLLDFPC--------SIWPGMQNI-----LGAKRP-VFLVGNKVDLLPRDSNIYLQH 228
Query: 354 L-DRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
+ D R K GG LN V L+SA+ G+ L+ + + +G+V+++G N G
Sbjct: 229 IKDSLQREFIKHGGGNGLNIKNVSLISAKTGYGIEELITQLHKTWAYKGDVYLVGCTNVG 288
Query: 411 KSTLINTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
KS+L N + + V K T P PGTTL +LR + P+ ++Y
Sbjct: 289 KSSLFNILLNSDYCRPEASDLVRKATTCPWPGTTLKLLRFPILRPSNDRVY 339
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 23/187 (12%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQAS-- 511
+YDTPG++ P +S L +E ++ ++PR +R++ ++ +GGL RLDL + +
Sbjct: 417 VYDTPGVMQPDQISPLLTAEELVKLQPATMIRPRAFRLRPQMSILLGGLARLDLLEITSP 476
Query: 512 ---VETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-----LGTWK 563
+ + V V+AS ++ + + + A+ ++K +VG P +G ASE L W
Sbjct: 477 RKHFDWLKVFVFASEHLPIMIADTQEAESVYKRYVG---SPFLGVPFASENLEARLRRWP 533
Query: 564 DRKLKVSGTSWDVNG--------IDIAAAGLGWFSLGLKG--EASLTLWTYDGIEITLRE 613
+ K G DI + GW + L G E L WT I RE
Sbjct: 534 GLQCKDGDIVLASEGRNEETRLNCDITLSSAGWMGILLPGHSECRLRAWTPKAAGIYRRE 593
Query: 614 PLVLDRA 620
P ++ A
Sbjct: 594 PALIPLA 600
>gi|156096526|ref|XP_001614297.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803171|gb|EDL44570.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1800
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 116/243 (47%), Gaps = 27/243 (11%)
Query: 400 NVWVIGAQNAGKSTLINTF---AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
N++++G N+GKS+LIN KK+ + +++ + IPGTTL ++I L + D
Sbjct: 1561 NIYIVGNANSGKSSLINYLLKNVKKKDNRNFQISNSIIPGTTLKNIQIK--LSKHITIND 1618
Query: 457 TPGLLHPHLMSMRLNRDEQKMV---EIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
TPG++ + LN DE K V +++K++ P Y V + +GGLM + +
Sbjct: 1619 TPGIISGQSLLSCLNFDEMKYVVCTKLKKKV-PAIY-VNKNDYIFIGGLMYIHILNIKKH 1676
Query: 514 TIYVTVWASPNVSLHLGK--IENADEIWKNHVGI-RLQPPIGQDRASELGTWKDRKLKVS 570
++ + S + + K ++A + + L PP +R +LGT+KD ++
Sbjct: 1677 YAIMSFFMSERIPIIKRKNFSKDAGNFLREKISSGFLYPPFSVERFDQLGTFKDCYFNIT 1736
Query: 571 GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEI---TLREPLVLDRA---PFLE 624
D + G + + ++G +T + ++ IE TL+ V+ R P+ +
Sbjct: 1737 NPCVDRDS--------GSYDVHVQGLGCITFYAFESIEFHLHTLKNVDVVSRTSLMPYHK 1788
Query: 625 RPG 627
R G
Sbjct: 1789 RYG 1791
>gi|340054098|emb|CCC48392.1| conserved hypothetical protein, fragment, partial [Trypanosoma
vivax Y486]
Length = 743
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 120/507 (23%), Positives = 192/507 (37%), Gaps = 113/507 (22%)
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQ---------------------------K 240
V G+I +VER +K K+ KAE + E Q +
Sbjct: 157 VRRGDIERYIVERQRKMKV-KAEYADRMSELQAHWKKHGRCVGEEWLDFMTQEEFDAFYR 215
Query: 241 EKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
++ VC RCH+L N G V+ PDF +++ A R K VVV+VVD
Sbjct: 216 DRNSPFVCYRCHALENLG-VEGRRRVWSAPDFT-EKLRALREKK-------CVVVLVVDI 266
Query: 301 VDFDGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR 356
DF G P + + + K D ++ G + + +
Sbjct: 267 TDFPGTMVYDLPGLISMNNDVIIAVNKMDCIRNRSFN---YSGKDKAVAACLLKEQYVRN 323
Query: 357 WVRHRAKAGGAPK--LNGVYLVSARKDLGVRNLLAFIKE-----LAGPRGNV--WVIGAQ 407
WV A G P+ + V +SA++ + L+ ++E L P + + +G
Sbjct: 324 WVTDIAVQFGLPRHQIKDVVPISAKRGWNIEKLIGTVEEASNLNLRRPVKPMMTYFVGVA 383
Query: 408 NAGKSTLINTFAKK------------------------EGV------------------- 424
N GKS+++N A K E V
Sbjct: 384 NVGKSSVLNAIAHKLYIPLPPHPESRKVYYTKKAKDGTEAVFWRWYTPPNVNQAEMIDIP 443
Query: 425 -----KVSKL-TEAPIPGTTL--GILRIG---GILPAKAKLYDTPGLL-HPHLMSMRLNR 472
K SKL T + +PGTT+ +R+ G KA L+DTPGLL H H S L
Sbjct: 444 SRHDKKASKLLTVSSLPGTTVEATAVRVSLTKGTSGEKAYLFDTPGLLPHWHRHSP-LTL 502
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKI 532
+ + IRK P+ + + G + + GL +D+ + + + V+ S V +
Sbjct: 503 LQMRRTLIRKYRNPQCFILVPGNTLLLSGLAAIDIVKGTSRGLLFMVYTSQKVRSAIINT 562
Query: 533 ENADEIWKNHVGIRLQPPIGQDRASELGTWKDRK--LKVSGTSWDVNGIDIAAAGLGW-- 588
E +DE W+ +G L PP ++ EL + + + D+ G+GW
Sbjct: 563 ERSDEFWREQLGKALDPPGSLEQLGELRLTESKSYLFECYKRHRRRPKADVYVCGIGWAA 622
Query: 589 FSLGLKGEASLTLWTYDGIEITLREPL 615
F + + L + T G+ +REPL
Sbjct: 623 FCVNEPCDVVLRVRTLPGVIHGIREPL 649
>gi|345312871|ref|XP_003429311.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C4orf14
homolog [Ornithorhynchus anatinus]
Length = 711
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 5/168 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG++ + + L E K+V + PRTY +K G + +G L R+D Q S +
Sbjct: 496 FYDTPGIMKENCVLNLLTDKEVKLVLPTHSIIPRTYMLKPGMVLFLGALGRIDYLQGS-K 554
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTWKDRKLKVSG 571
+ + +V AS + +H+ +E AD I++ H G LQ P+ G +R SE + L + G
Sbjct: 555 SAWFSVMASNLLPVHITTVEKADAIYQKHAGQALLQVPMGGTERMSEFPPLIPQDLTLEG 614
Query: 572 TSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY--DGIEITLREPLVL 617
DI + GW ++ ++ L L + G +T+R+P +L
Sbjct: 615 NVLQEAVADIKLSSAGWVAITVQELGPLQLRGHVPGGCALTVRQPPLL 662
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 101/230 (43%), Gaps = 44/230 (19%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
VC RC L ++ +P ++++ L +P +++ V D +D
Sbjct: 196 VCRRCWLLVHH----RRALRVRLPPGHHRQLLSDALRRP----GPALLLYVADLLDLPDA 247
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT--RL-DRWVRHRAK 363
F K L + +L+++G KVDLLP + RL DR A+
Sbjct: 248 FLPGLPKLLGPR---------------RLLVLGNKVDLLPGDSAGYLRRLRDRLGAECAR 292
Query: 364 AG------------GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
AG PKL V L+SA+ GV L++ ++ RG+V+++GA NAGK
Sbjct: 293 AGLGTGSGSGSGSGSKPKLPDVLLISAKTGYGVEELISTLQRSWRYRGDVYLVGATNAGK 352
Query: 412 STLINTFAK------KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
STL NT + K + + T +P PGTTL +L+ P +++
Sbjct: 353 STLFNTLLQSDYCTAKGAEAIDRATISPWPGTTLNLLKFPISNPTPYRMF 402
>gi|47197602|emb|CAF88049.1| unnamed protein product [Tetraodon nigroviridis]
Length = 360
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 11/142 (7%)
Query: 324 DDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA----KAGGAPKLNGVYLVSAR 379
D A+L +V++G KVDLLP+ SP L R R + +AG ++ V+L+SA+
Sbjct: 73 DLAELVGTNKHVVVLGNKVDLLPAD-SPNHLQRIRRRLSGYCREAGFGDQVADVHLISAK 131
Query: 380 KDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT-----FAKKEGVKVS-KLTEAP 433
GV L++ ++ G+V+++G NAGKSTL NT + K +V+ K T +P
Sbjct: 132 TGYGVEALVSSLQRSWKYNGDVYLVGVANAGKSTLFNTLLESDYCKSRASEVTRKATISP 191
Query: 434 IPGTTLGILRIGGILPAKAKLY 455
PGTTL +LR + P +L+
Sbjct: 192 WPGTTLNLLRFPIMNPTPHRLF 213
>gi|384485424|gb|EIE77604.1| hypothetical protein RO3G_02308 [Rhizopus delemar RA 99-880]
Length = 259
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 50/246 (20%)
Query: 226 LSKAERKKKAREAQKEKGEV----TVCARCHSLRNYGQVKNEVAENLIPDF--DFDRVIA 279
+++ + K+K RE ++ K + +C RCH L +Y + E + P+F + +
Sbjct: 17 VTEIDMKEKEREEEQVKQQTLSKRIICQRCHELHHYHKSTTESS----PEFLRASQQYGS 72
Query: 280 TRLMKPSGNANAGVVVMVVDCVDFDG---MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLV 336
+K + +VV V D D G P+ A++L ++
Sbjct: 73 LEFLKTKQDP---LVVAVCDITDLPGSLGHLPQLLAQNLGARVH---------------- 113
Query: 337 LVGTKVDLLP--SQVSPTRLDRWVRHRAKAGGAP--KLNGVYLVSARKDLGVRNLLAFIK 392
L K DLLP S+ R+ W+ K G P ++ V L+SA+K GV +L+ +
Sbjct: 114 LAANKFDLLPKSSRRHEQRIRDWIVQHVKNLGLPTKQVASVTLISAKKGWGVTSLMHRLD 173
Query: 393 ELAGPRGNVWVIGAQNAGKSTLINTFAKK-------EGVKVSK-------LTEAPIPGTT 438
P +++++G N GKS L+N F + EG ++ + +T + IPGTT
Sbjct: 174 RERRPTDDIYLVGCTNVGKSALVNKFMTQIRGSLDEEGRRLKEQLKAKYMITSSAIPGTT 233
Query: 439 LGILRI 444
+G ++I
Sbjct: 234 MGTIKI 239
>gi|345478814|ref|XP_001599126.2| PREDICTED: uncharacterized protein C4orf14 homolog [Nasonia
vitripennis]
Length = 761
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 138/317 (43%), Gaps = 58/317 (18%)
Query: 247 VCARCHSLRNYGQVKN-EVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
C RCH ++NY + V+ + P +L++ + +V+++VD DF
Sbjct: 282 TCQRCHFMKNYHTCLDVRVSPDEYP----------KLLEKINDNRRAIVILLVDLTDFPC 331
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP--SQVSPTRLDRWVRHRAK 363
S++ KL E + + +VG K+DLLP S + + +
Sbjct: 332 --------SIWPKLPEVIGTKR------HVYVVGNKIDLLPKDSTLFLDHVKDSLTESLI 377
Query: 364 AGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT---- 417
G K N V L+SA+ G+ L+ + ++ R +V+++G NAGKSTL NT
Sbjct: 378 EIGLTKTNIKHVGLISAKTGYGIEQLINKLYKVWQYRSDVYIVGCTNAGKSTLFNTLLQS 437
Query: 418 -FAKKEGVK-VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD-- 473
F K + V + + T +P PGTTL +L+ + ++L ++RL +D
Sbjct: 438 DFCKSQAVDLIQRATTSPWPGTTLNLLKFPILRHNSSRL---------KRRTLRLKQDQT 488
Query: 474 ---EQKMVEIRKELQPRTYRVKGGQA--VHVGGLMR---LDLDQASVETIYVTVWASPNV 525
+++M+ +K R + Q+ VH R L LD++ T +T+ N+
Sbjct: 489 MQHQEQMLREKKSRLSRNIELATLQSRIVHTFKDCREINLALDRSKENTDIITIDTKKNI 548
Query: 526 SLHLGKIENADEIWKNH 542
L E A E +H
Sbjct: 549 GLD----ETAPEFKTSH 561
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 5/167 (2%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
YDTPG + P + L DE + + PRT+ ++ G + + GL RLD+ ++S
Sbjct: 564 YDTPGTIQPDQILHFLTTDELMKTLPSRIISPRTFCIQPGLTIFIAGLGRLDILESS-NF 622
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKN--HVGIRLQPPIGQDRASELGTWKDRKLKVSGT 572
I TV+AS + + + ++E+++ ++ H + P +R K + + G
Sbjct: 623 IRCTVFASNKLPITICEVEDSELVYNELLHTEAFVVPMNNPERLKMWPELKSKDFETIGV 682
Query: 573 SWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLVL 617
+ D+ + GW ++ + + WT +G I LR P +L
Sbjct: 683 GHKESVSDVVLSSAGWIAITADENQRVVMRGWTPEGRGIYLRTPALL 729
>gi|282855625|ref|ZP_06264939.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
gi|282586555|gb|EFB91809.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
Length = 377
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 147/356 (41%), Gaps = 48/356 (13%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVD 299
K E +C RC +++YG + + L+ D + I + A + +V+D
Sbjct: 29 KNPDEGVLCKRCFQMKHYGVYR----KALLADAGIQKDIRAHAL------GAAALFLVLD 78
Query: 300 CVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLV-GTKVDLLPSQVSPTRLDRWV 358
+ E + D ++ + K V V K+DLL + + +W+
Sbjct: 79 ----------------VSRPEISLPDLDWAESMKKPVFVIANKIDLLEPWTTRKDVLQWL 122
Query: 359 RHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF 418
R + + LVSA+ + L I++ + GA N GKSTL+
Sbjct: 123 SERTGV----RKEQILLVSAQNRGDMAELRRHIEDTFDADDRLLFAGAANVGKSTLLGAL 178
Query: 419 AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMV 478
K E VS+L PGTT+G+ + L D PGL L D +
Sbjct: 179 LKNEVPTVSRL-----PGTTVGLTEYRMV--NGPVLVDAPGLKGEDPFVPVLCPDCLAAL 231
Query: 479 EIRKELQPRTYRVKGGQAVHVGGLMRLDL-DQASVETIYVTVWASPNVSLHLGKIENADE 537
+K Q +K GQ V GG+ +L + D + + ++A +V++H + E D
Sbjct: 232 SPKKNFQSSIEVLKTGQTVFWGGMAQLTVADAGERGWVRLGIFAPDSVTIHRTREERIDG 291
Query: 538 IWKNHVGIRLQPPIGQDRASELGT--WKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
+ K+HVG L PP + A++L T W++ + ++ D+ G+GW +L
Sbjct: 292 LMKDHVGELLVPPC-RKCAAKLRTQSWREEEFRIRPEE------DLVVPGIGWVAL 340
>gi|410931221|ref|XP_003978994.1| PREDICTED: LOW QUALITY PROTEIN: nitric oxide-associated protein
1-like [Takifugu rubripes]
Length = 696
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 11/131 (8%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAK----AGGAPKLNGVYLVSARKDLGVRNLLAF 390
++++G K+DLLP SP L R RH + AG +L ++L+SA+ GV L++
Sbjct: 265 IIVLGNKIDLLPMD-SPNYLQRIRRHLTQCCHDAGFGTQLADIHLISAKTGYGVEALVSS 323
Query: 391 IKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK------VSKLTEAPIPGTTLGILRI 444
++ +G+V+++G NAGKSTL NT + + K V K T +P PGTTL L+
Sbjct: 324 LQRSWKYKGDVYLVGLANAGKSTLFNTLLESDYCKSRASDVVHKATISPWPGTTLNXLKF 383
Query: 445 GGILPAKAKLY 455
+ P +++
Sbjct: 384 PIMNPTPHRMF 394
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
L+DTPG++ + L E V + + + PRT+ +K ++ VGGL R+D Q +
Sbjct: 478 LFDTPGIMKTQDILSLLTEKEVMSVVVTQAIIPRTFVLKPSTSLLVGGLARIDFLQGG-K 536
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTWKDRKLKVSG 571
+ + +V AS V +H+ ++ AD +++ H G + L P+ G +R + + + L++ G
Sbjct: 537 SCWFSVMASSQVPVHITSLDKADGVYQKHAGEVLLGVPMGGPERMRQFPAFVPQDLRLEG 596
Query: 572 TSWDVNGIDIAAAGLGWFSL 591
+ DI + GW ++
Sbjct: 597 RGYLEAAADITLSSAGWVAV 616
>gi|395542739|ref|XP_003773283.1| PREDICTED: nitric oxide-associated protein 1 [Sarcophilus harrisii]
Length = 376
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 5/168 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG++ + + L E K+V + PRT+ +K G + +G L RLD Q +
Sbjct: 79 FYDTPGIMKENCVLNYLTEKEVKIVLPTHSIVPRTFVLKPGMVLFLGALGRLDYLQGNT- 137
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTWKDRKLKVSG 571
+ + +V AS V +H+ +E AD I++ H G LQ P+ G +R +E + + + G
Sbjct: 138 SAWFSVVASNLVPVHITTLEKADGIYQKHAGQTLLQVPMGGVERMAEFPPLVSQDITLEG 197
Query: 572 TSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLVL 617
DI + GW ++ E L L +T +G +T+R+P +L
Sbjct: 198 IGKLEAVADIKLSSAGWVAVTSLSEDKLYLRGYTPEGTAVTVRQPPLL 245
>gi|195123554|ref|XP_002006270.1| GI18656 [Drosophila mojavensis]
gi|193911338|gb|EDW10205.1| GI18656 [Drosophila mojavensis]
Length = 547
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 139/328 (42%), Gaps = 56/328 (17%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVD 299
K + + C RCH L+NY N + +P + I +R+ + +++VD
Sbjct: 63 KTELQTITCQRCHFLKNY----NIALDVEVPPSAYVETI-SRIQD-----KYALAIIIVD 112
Query: 300 CVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP-------SQVSPT 352
+DF S++ +++ + K P + LVG KVDLLP + V
Sbjct: 113 LLDFPC--------SIWPGMQQV-----IGSKRP-VFLVGNKVDLLPRDCNNYLTHVKSC 158
Query: 353 RLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
+++ H GG LN V L+SA+ G+ L+ + + +G+V+++G N G
Sbjct: 159 LKQQFIEH----GGFNALNIKNVSLISAKTGFGIEELITQLHNVWAYKGDVYLVGCTNVG 214
Query: 411 KSTLINTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPH 464
KS+L N + + V K T PGTTL +L+ + P+ ++Y +
Sbjct: 215 KSSLFNILLNSDYCRPEASELVRKATTCAWPGTTLQMLKFPILRPSDIRIYQR----YKR 270
Query: 465 LMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLM---RLDLDQASVETIYVTVWA 521
L + R R + ++R+E T V Q + G RL++D A +
Sbjct: 271 LFAEREQR--AALEKMRREQAKDTGAVTSAQLIGTVGRTFNNRLEVDDA----FAMASGT 324
Query: 522 SPNVSLHLGKIENADEIWKNHVGIRLQP 549
P VSL+ K E + W +QP
Sbjct: 325 QPIVSLNERKAEYREARWVYDTPGVMQP 352
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 17/186 (9%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
+YDTPG++ P ++ L E ++ K L+PR R+ ++ +GGL R+DL + +
Sbjct: 343 VYDTPGVMQPDQLTPLLTTQELLHLQPTKMLKPRAVRLPSKMSLLLGGLARVDLLECNRS 402
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGI-RLQPPIGQDRASELGTW-------KDR 565
+ + V+A+ + + + A+ ++K ++G L P+ + L W KD
Sbjct: 403 WVKLFVFAAETLPILIADTSAAELVYKRYLGTPLLGVPMSSGDETRLQRWPGLQCMEKDI 462
Query: 566 KLKVSGTSWDVNG----IDIAAAGLGWFSLGL--KGEASLTLWTYDGIEITLREPLVLDR 619
+K +G DI + GW L + E + +WT I +R+P ++
Sbjct: 463 VVKNGALDSIDDGKQLNCDIVLSSAGWLGLLMPENSECIMRVWTPQAAGIYVRKPALI-- 520
Query: 620 APFLER 625
P ER
Sbjct: 521 -PLAER 525
>gi|167555073|ref|NP_001107900.1| nitric oxide-associated protein 1 [Danio rerio]
gi|161611968|gb|AAI55838.1| Zgc:175125 protein [Danio rerio]
Length = 702
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 25/184 (13%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR----AKAGGAPKLNGVYLVSARKDLGVRNLLA 389
++V++G KVDLLP L R R A+AG + V+L+SA+ G+ L++
Sbjct: 275 RVVVLGNKVDLLPGDAQ-NYLQRVRRQLMADCARAGISADPRDVHLISAKTGYGIETLIS 333
Query: 390 FIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK------VSKLTEAPIPGTTLGILR 443
++ RG+V++IG NAGKSTL NT + + K + + T +P PGTTL +L+
Sbjct: 334 SLQTRGRHRGDVYLIGMANAGKSTLFNTLLESDYCKSTAADAIHRATISPWPGTTLNLLK 393
Query: 444 IGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRK-ELQPRTYRVKGGQAV-HVGG 501
+ P H +S R R +Q I EL+ T+ + G + HVG
Sbjct: 394 FPILNPTA------------HRLSRRAERLQQTQQNITADELRRITHYSRHGYLIGHVGR 441
Query: 502 LMRL 505
+L
Sbjct: 442 TFQL 445
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 5/167 (2%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
YDTPG++ + + L E K+V + PRT+ +K G + +GGL R+D Q +
Sbjct: 493 YDTPGIIKENDLLSVLTEQEVKLVVPTVAITPRTFLLKPGTVLFLGGLARIDYLQGQ-NS 551
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIRL--QPPIGQDRASELGTWKDRKLKVSGT 572
+ TV AS V +H+ ++ AD+I++ H G L P G++R + ++ G
Sbjct: 552 CWFTVLASSRVPVHITSLDKADDIYQKHAGNTLLGVPCGGEERMKTFPPLIAQDFELQGQ 611
Query: 573 SWDVNGIDIAAAGLGWFSLGLKGEASLTLWTY--DGIEITLREPLVL 617
D DI + GW ++ L L T + LR P +L
Sbjct: 612 DCDTAIADIKISSAGWIAVTADAGDQLLLRTRAPAAAGVCLRTPPLL 658
>gi|72390111|ref|XP_845350.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|72390123|ref|XP_845356.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360448|gb|AAX80862.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|62360453|gb|AAX80867.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801885|gb|AAZ11791.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70801891|gb|AAZ11797.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 924
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 131/328 (39%), Gaps = 69/328 (21%)
Query: 356 RWVRHRAKAGGAPK--LNGVYLVSARKDLGVRNLLAFIKE-----LAGPRGNV--WVIGA 406
RWV A G P+ + V +SA++ V L+A ++E L P + + +G
Sbjct: 491 RWVTGIAVQFGLPRHQIKDVIPLSAKRGWNVEALIAAVEEASNLNLRRPTKPIPTYFVGV 550
Query: 407 QNAGKSTLINTFAKKEGV------------------------------------------ 424
N GKS++IN A K V
Sbjct: 551 ANVGKSSVINAIAHKLYVPLPPHPESRKVYYTKKAPDGSESVFWRWYTPPNVNQAEMIDI 610
Query: 425 ------KVSKL-TEAPIPGTTLGILRI-----GGILPAKAKLYDTPGLL-HPHLMSMRLN 471
K SKL T + +PGTT+ + + G +A L+DTPGLL H H S L
Sbjct: 611 PSRHDKKASKLVTTSSLPGTTVDAVAVRVSLSKGAEKGRAHLFDTPGLLPHWHRHSP-LT 669
Query: 472 RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGK 531
+ + IRK P+ + + G + +GGL +D+ + + + V+ S V +
Sbjct: 670 LLQMRRTLIRKFRNPQCFILVPGNTLFLGGLCAVDVVKGTSRGMLFMVYTSQKVRNAIIN 729
Query: 532 IENADEIWKNHVGIRLQPPIGQDRASELGTWKDRK--LKVSGTSWDVNGIDIAAAGLGW- 588
+ +DE W+ +G L PP ++ +L + R + + DI GLGW
Sbjct: 730 TDRSDEFWREQLGRALDPPGSVEQVGDLRLTESRSYLFECYQRNRKRPKADIYFCGLGWV 789
Query: 589 -FSLGLKGEASLTLWTYDGIEITLREPL 615
F + + L + T G+ +REPL
Sbjct: 790 AFCVNEPADVVLRVRTLPGVVHGVREPL 817
>gi|221058369|ref|XP_002259830.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809903|emb|CAQ41097.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 1867
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 110/234 (47%), Gaps = 20/234 (8%)
Query: 400 NVWVIGAQNAGKSTLINTF---AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
N++++G N+GKS+L+N KK+ + +++ + IPGTTL ++I L + D
Sbjct: 1629 NIYMVGNANSGKSSLMNYLLKNVKKKDNRNFEISNSIIPGTTLKNIQIK--LSKNITIND 1686
Query: 457 TPGLLHPHLMSMRLNRDEQKMVEIRK-ELQPRTYRVKGGQAVHVGGLMRLDLDQASVETI 515
TPG++ + LN DE K V K + + R+ + + +GGL+ + +
Sbjct: 1687 TPGIISSQSILSCLNFDEMKYVVCTKLKKKVRSIYINKNDYIFIGGLVYIHILNIKKHYA 1746
Query: 516 YVTVWASPNVSLHLGK--IENADEIWKNHVGI-RLQPPIGQDRASELGTWKDRKLKVSGT 572
++ + S + + K ++A + + +G L PP +R EL +KD ++
Sbjct: 1747 IMSFFMSEKIPIIKRKNFCKDAGKFLREKIGSGFLYPPFSVERFDELNNFKDCYFNITNP 1806
Query: 573 SWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEI---TLREPLVLDRAPFL 623
D + G + + ++G +T ++++ IE TL V+ R+ +
Sbjct: 1807 CVDRDS--------GSYDIHIQGLGCITFYSFENIEFYLHTLNNVDVVSRSSLM 1852
>gi|261328751|emb|CBH11729.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 854
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 134/335 (40%), Gaps = 69/335 (20%)
Query: 349 VSPTRLDRWVRHRAKAGGAPK--LNGVYLVSARKDLGVRNLLAFIKE-----LAGPRGNV 401
V+ + RWV A G P+ + V +SA++ V L+A ++E L P +
Sbjct: 484 VTERYVRRWVTGIAVQFGLPRHQIKDVIPLSAKRGWNVEALIAAVEEASNLNLRRPTKPI 543
Query: 402 --WVIGAQNAGKSTLINTFAKKEGV----------------------------------- 424
+ +G N GKS++IN A K V
Sbjct: 544 PTYFVGVANVGKSSVINAIAHKLYVPLPPHPESRKVYYTKKAPDGSESVFWRWYTPPNVN 603
Query: 425 -------------KVSKL-TEAPIPGTTLGILRI-----GGILPAKAKLYDTPGLL-HPH 464
K SKL T + +PGTT+ + + G +A L+DTPGLL H H
Sbjct: 604 QAEMIDIPSRHDKKASKLVTTSSLPGTTVDAVAVRVSLSKGAEKGRAHLFDTPGLLPHWH 663
Query: 465 LMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPN 524
S L + + IRK P+ + + G + +GGL +D+ + + + V+ S
Sbjct: 664 RHSP-LTLLQMRRTLIRKFRNPQCFILVPGNTLFLGGLCAVDVVKGTSRGMLFMVYTSQK 722
Query: 525 VSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRK--LKVSGTSWDVNGIDIA 582
V + + +DE W+ +G L PP ++ +L + R + + DI
Sbjct: 723 VRNAIINTDRSDEFWREQLGRALDPPGSVEQVGDLRLTESRSYLFECYQRNRKRPKADIY 782
Query: 583 AAGLGW--FSLGLKGEASLTLWTYDGIEITLREPL 615
GLGW F + + L + T G+ +REPL
Sbjct: 783 FCGLGWVAFCVNEPADVVLRVRTLPGVVHGVREPL 817
>gi|47212015|emb|CAF95421.1| unnamed protein product [Tetraodon nigroviridis]
Length = 609
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 11/142 (7%)
Query: 324 DDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA----KAGGAPKLNGVYLVSAR 379
D A+L +V++G KVDLLP+ SP L R R + +AG ++ V+L+SA+
Sbjct: 144 DLAELVGTNKHVVVLGNKVDLLPAD-SPNHLQRIRRRLSGYCREAGFGDQVADVHLISAK 202
Query: 380 KDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT-----FAKKEGVKVS-KLTEAP 433
GV L++ ++ G+V+++G NAGKSTL NT + K +V+ K T +P
Sbjct: 203 TGYGVEALVSSLQRSWKYNGDVYLVGVANAGKSTLFNTLLESDYCKSRASEVTRKATISP 262
Query: 434 IPGTTLGILRIGGILPAKAKLY 455
PGTTL +LR + P +L+
Sbjct: 263 WPGTTLNLLRFPIMNPTPHRLF 284
>gi|312379364|gb|EFR25662.1| hypothetical protein AND_08807 [Anopheles darlingi]
Length = 691
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 38/228 (16%)
Query: 240 KEKGEVTVCARCHSLRNYGQVKNEVAENL-IPDFDFDRVIATRLMKPSGNANAGVVVMVV 298
KE+ T+C RCH L++Y VA N+ + D+ ++ S + + +++V
Sbjct: 228 KEQLTHTICQRCHFLKHY-----NVAINVSVSSEDYIELLL------SIRSKKALALLLV 276
Query: 299 DCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLD--- 355
D DF S++ + + L P +++ G KVDL+P P L+
Sbjct: 277 DLTDFPC--------SIWPGMADI-----LGPNRP-VIVAGNKVDLIPRDC-PGYLENVR 321
Query: 356 RWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
+ + G + N V L+SA G+ L+ + + G RG+V+++G N GKST
Sbjct: 322 KCLTQSMIESGFARTNIKHVALISASTGYGIEELITKLHSVWGTRGDVYLVGCTNVGKST 381
Query: 414 LINTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
L N + + K V K T +P PGTT+ L+ + P+ +LY
Sbjct: 382 LFNALLRSDLCKVQATDLVQKATASPWPGTTIRTLKFPILRPSDYRLY 429
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 87/172 (50%), Gaps = 13/172 (7%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLD-LDQASVE 513
YDTPG++HP + L +E M ++ ++PR Y ++ G + + GL RLD LD E
Sbjct: 504 YDTPGVVHPAQILDLLTTEEILMALAKRTIRPRAYLLRKGMTLFLAGLGRLDYLD--GPE 561
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQP-PIGQDRASELGTWKDRK----LK 568
++ V V+A+P + + +A E++ + +G L P G + L W + + +
Sbjct: 562 SVRVMVYAAPTLPTLITYTTDAGELYSDLLGSPLLAVPFGSEE--RLKRWPELRASPDIL 619
Query: 569 VSGTSW-DVNGIDIAAAGLGWFS--LGLKGEASLTLWTYDGIEITLREPLVL 617
+ GTS + DI + GW + L ++ EA+ WT D + R+P +L
Sbjct: 620 LHGTSAKHIAAGDIVLSSAGWVAVHLPMQSEATFRAWTPDRRGVCTRQPSLL 671
>gi|195335495|ref|XP_002034399.1| GM21850 [Drosophila sechellia]
gi|194126369|gb|EDW48412.1| GM21850 [Drosophila sechellia]
Length = 624
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 238 AQKEKGEVTVCARCHSLRNYG-QVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVM 296
Q+E +T C RCH L Y + EVA + D R+ + ++
Sbjct: 136 TQQELQTIT-CKRCHFLNQYNIALDVEVAPSTYVD-TISRI----------QDKFALAIV 183
Query: 297 VVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP--SQVSPTRL 354
+VD +DF S++ ++ L K P + LVG KVDLLP S + +
Sbjct: 184 LVDLLDFPC--------SIWPGMQNI-----LGAKRP-VFLVGNKVDLLPRDSNIYLQHI 229
Query: 355 -DRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
D R K GG LN V L+SA+ G+ L+ + + +G+V+++G N GK
Sbjct: 230 KDSLQREFIKHGGGDGLNIKNVSLISAKTGYGIEELITQLHKTWAYKGDVYLVGCTNVGK 289
Query: 412 STLINTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
S+L N + + V K T P PGTTL +LR + P+ ++Y
Sbjct: 290 SSLFNILLNSDYCRPEASDLVRKATTCPWPGTTLKLLRFPILRPSSDRVY 339
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDL-----D 508
+YDTPG++ P +S L +E ++ ++PR +R++ ++ +GGL RLDL
Sbjct: 417 VYDTPGVMQPDQISPLLTAEELVKLQPATMIRPRAFRLRPQMSILLGGLARLDLLEIRSP 476
Query: 509 QASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-----LGTWK 563
+ + + V V+AS ++ + + E A+ ++K +VG P +G ASE L W
Sbjct: 477 RKHFDWLKVFVFASEHLPIMIADTEAAESVYKRYVG---SPFLGVPFASEDLEARLRRWP 533
Query: 564 DRKLKVSGTSWDVNG--------IDIAAAGLGWFSLGLKG--EASLTLWTYDGIEITLRE 613
+ K G DI + GW L G E L WT I RE
Sbjct: 534 GLQCKDGDIVLASQGRNEGTRLNCDITLSSAGWMGFLLPGHSECRLRAWTPQAAGIYRRE 593
Query: 614 PLVLDRA 620
P ++ A
Sbjct: 594 PALIPLA 600
>gi|126331705|ref|XP_001369899.1| PREDICTED: uncharacterized protein C4orf14 homolog [Monodelphis
domestica]
Length = 685
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 5/168 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG++ + + L E K+V + + PRT+ +K G + +G L RLD Q +
Sbjct: 484 FYDTPGIVKENCVLNYLTEKEVKIVLPTRSIIPRTFILKPGTVLFLGALGRLDYLQGNT- 542
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTWKDRKLKVSG 571
+ + +V AS + +H+ +E AD I++ H G LQ P+ G +R +E + + + G
Sbjct: 543 SAWFSVVASNLLPVHITTLEKADTIYQKHAGQTLLQVPMGGVERMAEFPPLVSQDITLEG 602
Query: 572 TSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLVL 617
DI + GW ++ E L L +T G +T+R+P +L
Sbjct: 603 NGKLEAVADIKLSSAGWVAVTSLSEDKLHLRGYTPQGTTLTIRQPPLL 650
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 32/153 (20%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR--------------AKAGGAP----------K 369
+L+L+G KVDLLP SP L R +R R KA G P +
Sbjct: 243 QLMLLGNKVDLLPGD-SPGYLRR-LRERLWDECARAGLQLVPTKAKGRPAEAGRTGPQCQ 300
Query: 370 LNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGV----- 424
+ V L+SA+ GV +++ ++ RG+V+++G+ NAGKSTL NT + +
Sbjct: 301 VQDVLLISAKTGFGVEEMISAVQRSWRYRGDVYLVGSTNAGKSTLFNTLLQSDYCIAKGA 360
Query: 425 -KVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
+ + T +P PGTTL +L+ P +L++
Sbjct: 361 DAIDRATISPWPGTTLNLLKFPISSPTPYRLFE 393
>gi|194880981|ref|XP_001974627.1| GG21848 [Drosophila erecta]
gi|190657814|gb|EDV55027.1| GG21848 [Drosophila erecta]
Length = 623
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 37/233 (15%)
Query: 236 REAQKEKGEVTVCARCHSLRNYG-QVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
R +++ + C RCH L +Y + EVA + D R+ +
Sbjct: 133 RGRTQQELQTISCKRCHFLNHYNIALDVEVAPSTYVD-TISRI----------QDKFALA 181
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP--SQVSPT 352
+++VD +DF S++ ++ L K P + LVG KVDLLP S +
Sbjct: 182 IVLVDLLDFPC--------SIWPGMQHI-----LGTKRP-VFLVGNKVDLLPRDSNIYLQ 227
Query: 353 RL-DRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNA 409
+ D R K GG LN + L+SA+ G+ L+ + + +G+V+++G N
Sbjct: 228 HIKDSLQREFIKHGGGDGLNIKNISLISAKTGYGIEELITQLHKTWAYKGDVYLLGCTNV 287
Query: 410 GKSTLINTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
GKS+L N + + V K T P PGTTL +LR + P+ ++Y
Sbjct: 288 GKSSLFNILLNSDYCRPEATDLVRKATACPWPGTTLKLLRFPILRPSSDRVYQ 340
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 22/186 (11%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLD-LDQASV 512
+YDTPG++ P +S L +E ++ ++PRT+R++ ++ +GGL RLD LD S
Sbjct: 417 VYDTPGVMQPDQISPLLTAEELVKLQPTTMIRPRTFRLRPQMSILLGGLARLDLLDITSP 476
Query: 513 ETIY----VTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-----LGTW- 562
Y V V+AS ++ + + + A+ ++K +VG P +G ASE L W
Sbjct: 477 RKQYDWLKVFVFASEHLPILIADSQAAESVYKRYVG---SPFLGVPFASEDLEARLRRWP 533
Query: 563 --KDRKLKVSGTSWDVN----GIDIAAAGLGWFSLGLKG--EASLTLWTYDGIEITLREP 614
+ R + S + N DI + GW L G E L WT I REP
Sbjct: 534 GLQCRDEDIVLASEERNEGRLNCDITLSSAGWMGFLLPGHSECRLRAWTPHAAGIYKREP 593
Query: 615 LVLDRA 620
++ A
Sbjct: 594 ALVPLA 599
>gi|301102847|ref|XP_002900510.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262101773|gb|EEY59825.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 513
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 32/174 (18%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG-M 306
C RC + YG++ ++ +P +++R R+M+ + +++ +VD +D G +
Sbjct: 43 CERCFQMTQYGKI----SDTKMPYQEYER----RVMEL--RSKDMLMIQLVDILDISGSL 92
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
PK A+ +F K ++LV K DL+P++ RL R ++ AK G
Sbjct: 93 LPK--ARHIFGK--------------KPVMLVVNKGDLVPTKSGIRRLMRRIKQEAKEAG 136
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGN--VWVIGAQNAGKSTLINTF 418
L +YL+SA K +G++ + ++++A R N + V+GA N GKST +N+F
Sbjct: 137 VDNLISIYLISAMKRIGMKEI---VEDVAKYRQNRDICVVGAANVGKSTFLNSF 187
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 97/232 (41%), Gaps = 53/232 (22%)
Query: 428 KLTEAPIPGTTLGILRIGGILPAKA-KLYDTPGLLHPHLMSMRLNRDEQKMVEI------ 480
++T +P+PGTTL + + ++ + + DTPGL+ + QK+VE+
Sbjct: 276 EMTTSPLPGTTLAVQYLPVMVRNEVFNILDTPGLI--------TDSKRQKLVEVLALDGA 327
Query: 481 --------RKELQPRTYRVKGGQAVHVGGLMRLD---LDQASVETIYVTVWASPNVSLHL 529
K+L TYRV+ G+++ +G L R D L + + + + W + HL
Sbjct: 328 AKLKNVFPSKQLPVTTYRVRPGRSLFLGALARFDYETLGKDNDKNFLLLSWYGV-LPGHL 386
Query: 530 GKIENADEIWKNHVGIRLQPPIGQDRASELG--------TWKDRKLKVSGTSWD------ 575
E A++ + H G L PP G D S G KD L + T
Sbjct: 387 TNTERAEDTFVKHAGGILSPPRGLDAMSFTGPPTLSQNVYLKDYILDSALTKSKHKKPKR 446
Query: 576 VNGIDIAAAGLGWFSLG---LKGEAS---------LTLWTYDGIEITLREPL 615
+++ G GW S+ L G AS +++ T G+ + R PL
Sbjct: 447 TTVVELEVPGFGWLSVTAVDLDGTASSQKTLNQGKISVHTCRGLSVVPRAPL 498
>gi|325189773|emb|CCA24254.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 556
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 87/172 (50%), Gaps = 24/172 (13%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVM-VVDCVDFDGM 306
C RC+ + +G++K + F +L+K ++N+ V+++ +VD +D G
Sbjct: 79 CERCYQMEVHGKLKVQR--------QFSYETFGKLLKDELSSNSNVLLLQLVDILDIPG- 129
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
SL A + +++L+ K DL+P + RL R ++ +AK+ G
Sbjct: 130 -------SLLSTAHRAFGTDR------QVMLIVNKGDLIPLKSGTRRLMRHIQQQAKSAG 176
Query: 367 APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF 418
+ +YLVSA K +G+ +L IK+ R ++ VIGA N GKST +N+F
Sbjct: 177 IQNIQAIYLVSALKGIGMHEILRDIKKFRKNR-DLCVIGAANVGKSTFLNSF 227
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 66/154 (42%), Gaps = 27/154 (17%)
Query: 428 KLTEAPIPGTTLGILRIGGILPAKAKLY---DTPGLLHPHLMSMRLNRDEQKMVEI---- 480
KLT +P+PGTTL + I + A KL+ DTPGL+ + Q++VE+
Sbjct: 323 KLTTSPLPGTTLAVQYIPVV--ANNKLFNIIDTPGLIE--------DTKRQQLVEVLATD 372
Query: 481 ----------RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLG 530
K L YR+K Q++ +G L R D + + H+
Sbjct: 373 ASNALRNVFPTKTLPATIYRLKPNQSLFLGALARFDYISPGENRDQLLFCWHGVLPGHVT 432
Query: 531 KIENADEIWKNHVGIRLQPPIGQDRASELGTWKD 564
K NA+ ++ H G L PP G + S G KD
Sbjct: 433 KTANAEAMFIKHAGKILSPPRGLNALSFTGPLKD 466
>gi|195487584|ref|XP_002091970.1| GE11927 [Drosophila yakuba]
gi|194178071|gb|EDW91682.1| GE11927 [Drosophila yakuba]
Length = 623
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 104/233 (44%), Gaps = 37/233 (15%)
Query: 236 REAQKEKGEVTVCARCHSLRNYG-QVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVV 294
R +E+ + C RC+ L +Y + EVA + D R+ +
Sbjct: 133 RGRTQEELQTITCKRCYFLNHYNIALDVEVAPSTYVD-TISRI----------QDKFALA 181
Query: 295 VMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP--SQVSPT 352
+++VD +DF S++ ++ L K P + LVG KVDLLP S V
Sbjct: 182 IVLVDLLDFPC--------SIWPGMQNL-----LGPKRP-VFLVGNKVDLLPRDSNVYLQ 227
Query: 353 RL-DRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNA 409
+ D R K GG LN V L+SA+ G+ L+ + + +G+V+++G N
Sbjct: 228 HIKDSLQREFIKHGGGDGLNIKNVSLISAKTGYGIEELITQLHKTWAYKGDVYLLGCTNV 287
Query: 410 GKSTLINTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
GKS+L N + + V K T P PGTTL +LR + P+ ++Y
Sbjct: 288 GKSSLFNILLNSDYCRPEASDLVRKATTCPWPGTTLKLLRFPILRPSNDRVYQ 340
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQAS-- 511
+YDTPG++ P +S L +E ++ ++PR +R++ ++ +GGL RLDL + +
Sbjct: 417 VYDTPGVMQPDQISPLLTAEELVKLQPTSMIRPRAFRLRPQMSILLGGLARLDLLEITSA 476
Query: 512 ---VETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-----LGTW- 562
+ + V V+A + + + + A+ ++ ++G P +G ASE L W
Sbjct: 477 RKQFDWLKVFVFAPVQLPILIADTQAAESVYNRYLG---SPFLGVPFASEDLEARLRRWP 533
Query: 563 --KDRKLKVSGTSWDVN----GIDIAAAGLGWFSLGLKG--EASLTLWTYDGIEITLREP 614
+ R + S + N DI + GW L G E L WT I REP
Sbjct: 534 GLQCRDEDIVLASEERNEGRLNCDITLSSAGWMGFLLPGHSECRLRAWTPQAAGIYKREP 593
Query: 615 LVLDRA 620
++ A
Sbjct: 594 ALVPLA 599
>gi|269123217|ref|YP_003305794.1| GTP-binding protein HSR1-like protein [Streptobacillus moniliformis
DSM 12112]
gi|268314543|gb|ACZ00917.1| GTP-binding protein HSR1-related protein [Streptobacillus
moniliformis DSM 12112]
Length = 391
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVY-----LVSARKDLGVRNLLA 389
++ V K+DLLP + + +WV++ N VY +SA+ GV +
Sbjct: 98 ILAVINKIDLLPGYIHIAEVSKWVKYYFSE------NNVYPEDVAFISAKNRYGVNGIFR 151
Query: 390 FIKELA--------GPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGI 441
I+ +A + VIG N GKS LIN +K VSK + GTT +
Sbjct: 152 KIQYIAKNILKKSLDSNVKIAVIGVSNVGKSNLINLLLEKNISTVSKFS-----GTTKKM 206
Query: 442 LRIGGILPAKAKLY-----DTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQA 496
L + K K Y DTPGL+ +S LN D + E+ +TYR+K Q
Sbjct: 207 L----VNKKKTKEYMLTIIDTPGLIPEGRLSDLLNSDISYKLVPSGEISRKTYRLKEKQV 262
Query: 497 VHVGGLMRLDLDQA--SVETIYVTVWASPNVSLHLGKIENADEIWKN 541
L ++ + + ++ +AS V H+ +E A E+ KN
Sbjct: 263 FMFENLAYFEVKNIPDNKSSAIISAYASREVKFHITNMEKAKELSKN 309
>gi|413926893|gb|AFW66825.1| hypothetical protein ZEAMMB73_244891 [Zea mays]
Length = 375
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 30/208 (14%)
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
++V +VD VDF+G F L +D A + ++LV TKVDLLP
Sbjct: 180 ALIVKLVDIVDFNGSF-----------LARVRDFAGANP----IILVITKVDLLPRDTDL 224
Query: 352 TRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNA 409
+ WV ++ KLN V+L S++ +G+ +++ I + R +V+++G+ N
Sbjct: 225 NCIGDWV---VESVVKKKLNVLSVHLTSSKSLVGITGVISEIHQERKGR-DVYILGSANV 280
Query: 410 GKSTLIN----TFAKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLL 461
GKS I+ T A K+ V + K ++ +PGTTLG ++I L KLYDTPG+
Sbjct: 281 GKSAFISAMLRTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFL-GGGKLYDTPGVH 339
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTY 489
H + ++ D+ + + L+ R +
Sbjct: 340 LHHRQAAVIHADDLPSLAPQSRLKGRCF 367
>gi|288574881|ref|ZP_06393238.1| GTPase-like protein [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570622|gb|EFC92179.1| GTPase-like protein [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 378
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 150/382 (39%), Gaps = 45/382 (11%)
Query: 237 EAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVM 296
E + G V +C RC +++YG K ++ D R ++ + +
Sbjct: 29 EGKDPDGNV-ICKRCFQMKHYGVFKKASIKDSSIKKDISREVS----------GCSAIFL 77
Query: 297 VVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR 356
VVD F+ + + D P V++ K D+L ++P +
Sbjct: 78 VVDICQFE--------------ISSSALDWVADLNKPVFVVI-NKCDVLSKWITPGEIAS 122
Query: 357 WVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN 416
W R L+ VY +SA VR+L I++ P + ++G N GKSTL++
Sbjct: 123 WASERLPV----PLHRVYPLSALNRKSVRDLRNRIEDAFPPGSKILLLGTTNVGKSTLLS 178
Query: 417 TFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQK 476
+ +S+L PGTTLGI ++ A + D PGL + +L D
Sbjct: 179 GLTGDDTPTISRL-----PGTTLGITQVKSRHSAITYV-DVPGLKEVNPWLGKLCADCLT 232
Query: 477 MVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET-IYVTVWASPNVSLHLGKIENA 535
+ +K+LQ + +K GQ++ +G + +D A I V +A+ + H +
Sbjct: 233 GLIPQKKLQSYSTVLKPGQSLSLGAIGWFVVDDAGERGWIKVEAFAADEMIFHRTTEDRL 292
Query: 536 DEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVN-GIDIAAAGLGWFSLGLK 594
E+ + P AS G D + G+DI G GWFS+
Sbjct: 293 HELLAPYREDLFSLPCSSCWASLEGP------DYVEYREDFHVGLDIVLPGCGWFSV-RS 345
Query: 595 GEASLTLWTYDGIEITLREPLV 616
G + + GI LR LV
Sbjct: 346 GYGNGRFYLPKGISPILRPALV 367
>gi|146093650|ref|XP_001466936.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134071300|emb|CAM69985.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 918
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 176/488 (36%), Gaps = 146/488 (29%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
C RCH+L N G V+ PDF D++ A + K VVV+VVD DF G
Sbjct: 364 TCHRCHALENLG-VEGRRKVWSAPDFT-DQLRALKEKK-------CVVVLVVDITDFPGS 414
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ---------------VSP 351
D L +++ K+D + ++ VS
Sbjct: 415 M--------------VYDLPGLISMNNSVIIAVNKMDCIRNRSFNYASKDRSVAACLVSE 460
Query: 352 TRLDRWVRHRAKAGGAPK--LNGVYLVSARKDLGVRNLLAFIKELAG-----PRGNV--W 402
+ + RWV A G P+ + V +SA++ G+ +L++ I++ A P + +
Sbjct: 461 SYVRRWVMDIAVQFGLPQHQIKKVVPLSAKRGWGITHLISAIEDAANLNLRRPHKPLPTY 520
Query: 403 VIGAQNAGKSTLINTFAK------------------------------------------ 420
+G N GKS++IN A
Sbjct: 521 FVGVANVGKSSVINAMAHALYVPQPPHPESRKVYYTKTDAQGKNAVFWRWYTPPNVNQAE 580
Query: 421 ------KEGVKVSKL-TEAPIPGTTLGI--------------------LRIGGILPAKAK 453
+ K SKL T + +PGTT+ + L G P KA
Sbjct: 581 MLDIRGRHDKKASKLMTVSSLPGTTVAVNAVRLSLGPTAHTAKQERQRLSEGATAPGKAD 640
Query: 454 --------LYDTPGLL-HPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMR 504
+YDTPGLL H H S+ L + + IRK P+ + + G + +GGL
Sbjct: 641 DVAGTQTYIYDTPGLLPHWHQRSL-LTLLQMRRTLIRKFRNPQCFLLLPGHTLFLGGLAA 699
Query: 505 LDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPP-------------- 550
+D+ + + V+ S V + +D W+ +G L PP
Sbjct: 700 VDVVRGPPRGLLFLVYTSQKVRNAIVNTVQSDAFWREQLGKALDPPGSYEQLLPLDDLST 759
Query: 551 -IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGW--FSLGLKGEASLTLWTYDGI 607
G+ R SE ++ + G D+ GLGW F + + L + T G+
Sbjct: 760 AAGRPRLSETRSY---LFECYGRHRRRPKADLYVCGLGWTSFCVSEPADVVLRVRTLPGV 816
Query: 608 EITLREPL 615
+REPL
Sbjct: 817 VHGVREPL 824
>gi|255030450|ref|ZP_05302401.1| GTP-binding protein YqeH [Listeria monocytogenes LO28]
Length = 173
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 80/172 (46%), Gaps = 35/172 (20%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L++Y NE+ + + D DF R++ ++ ++V VVD DF
Sbjct: 33 EQVICKRCFRLKHY----NEIQDVALTDDDFLRILN------QISSKQALIVYVVDIFDF 82
Query: 304 DGM----FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DG P+ A + ++LVG K D+LP + +L RW+R
Sbjct: 83 DGSWLPGLPRFAGSN-------------------PVLLVGNKEDVLPKSLKRDKLTRWMR 123
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
RAK G + V LVSA K G LL I EL + +V+V+G N GK
Sbjct: 124 TRAKEQGLAATD-VVLVSAEKGHGFDTLLEKIDELRNGQ-DVYVVGCTNVGK 173
>gi|291223758|ref|XP_002731875.1| PREDICTED: GI18656-like [Saccoglossus kowalevskii]
Length = 765
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 37/219 (16%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E T+C RC L Y Q+ +V + DF ++I+ +V+ +VD +DF
Sbjct: 369 ERTICQRCWLLTRY-QLALDVK---VTPTDFVKLIS------QIKRRRAMVICMVDLMDF 418
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLD----RWVR 359
S+F L+E + K + ++VG K+D+LP SP L+ + ++
Sbjct: 419 PC--------SIFPNLKEIIGNNK------QTIIVGNKLDILPKD-SPKYLEHIKTKIIQ 463
Query: 360 HRAKAGGA--PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
+AG A + V L+SA+ GV +L+ ++++ +G+V+++G N GKSTL N
Sbjct: 464 ECVEAGIALLQNIRHVALISAKSGFGVEDLITQMQQIWRYKGDVYLVGCTNVGKSTLFNR 523
Query: 418 FAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPA 450
+ + K + K T + PGTTL +L+ + P
Sbjct: 524 LLESDYCKTKVSNILHKATISLWPGTTLNLLKFPILSPT 562
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+++ + + +L DE K+V + L P+T R+K Q+ + GL RLD Q +
Sbjct: 663 FYDTPGVINKNQILTKLTSDELKLVLPSRVLTPQTIRLKPSQSFLLAGLGRLDYLQGG-D 721
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWK 540
+I +TV+AS ++ +++ + +A+ +K
Sbjct: 722 SILLTVFASHHLPVYVMETLDAEIKYK 748
>gi|339450987|ref|ZP_08654357.1| GTPase YqeH [Leuconostoc lactis KCTC 3528]
Length = 152
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
L DTPG++ ++ L+ + K + E++PRTY++ Q + +GGL R D + S E
Sbjct: 5 LIDTPGIIKRDQIAHVLSDKDLKYALPKNEIKPRTYQLNPEQTLFIGGLARFDFE--SGE 62
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTS 573
T + N++LH K+ AD ++ HVG L P A+ L V T
Sbjct: 63 RASFTAYFENNLNLHRTKLAGADAFYEKHVGTLLTP--APKTATPL---------VKHTF 111
Query: 574 WDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
DI AGLGW S + ++ W G+ + +R+ ++
Sbjct: 112 KTTEKSDIVFAGLGWIS--VPAGVQVSGWAPQGVSVLIRKAMI 152
>gi|302831095|ref|XP_002947113.1| hypothetical protein VOLCADRAFT_120437 [Volvox carteri f.
nagariensis]
gi|300267520|gb|EFJ51703.1| hypothetical protein VOLCADRAFT_120437 [Volvox carteri f.
nagariensis]
Length = 926
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 104/211 (49%), Gaps = 42/211 (19%)
Query: 290 NAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQV 349
A +VV++VD D G SL ++ + + + P +VLVGTK+DLLP
Sbjct: 286 RAALVVLLVDLTDVAG--------SLLTRVRD------MVGRNP-IVLVGTKMDLLPEGC 330
Query: 350 SPTRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQ 407
P+ + W+ + A KLN V+LVS+ G+ +A I R +V+V+GA
Sbjct: 331 RPSDVAEWL---SGAAATKKLNVVSVHLVSSHTRDGMSAAVAVICSERKSR-DVYVVGAA 386
Query: 408 NAGKSTLINTFAKKE--------GVKVSKLTEAPIPGTTLGILRI-----GGILPAKAKL 454
N GKS + K+ G+ E+ +PGTTLG++ + GG+ L
Sbjct: 387 NVGKSAFVRAMLKEMARTDPAALGMGKYLPVESAMPGTTLGLIPLRAFSSGGV------L 440
Query: 455 YDTPGL-LHPHLMSMRLNRDEQKMVEIRKEL 484
+DTPG+ LH ++ M L+ E K++ R+ L
Sbjct: 441 FDTPGIHLHHRVLHM-LSPAELKLLHPRRRL 470
>gi|321475687|gb|EFX86649.1| hypothetical protein DAPPUDRAFT_313052 [Daphnia pulex]
Length = 710
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 34/220 (15%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC LR++ N N+ P+ ++ +VI+ +V++VVD +DF
Sbjct: 242 ICQRCRFLRDHDVALNV---NISPE-EYPKVISVI------RDQVAMVILVVDLLDFPC- 290
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP--SQVSPTRLDRWVRHRAKA 364
S++ L + + K P + +VG KVDL+P S+ + + + + +
Sbjct: 291 -------SIWPGLLDI-----IGTKRP-VCVVGNKVDLIPKDSRGYLNHIQKCLVNELEN 337
Query: 365 GGAPKLNG--VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE 422
G + N V L+SA GV L+ I+ G RG+V+++G N GKS+L N +
Sbjct: 338 SGINRANIKLVSLISATTGFGVEQLITKIQNSWGARGDVYLLGCTNVGKSSLFNALISSD 397
Query: 423 GVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
K + + T + PGTTL +L+ + P+ +LY+
Sbjct: 398 FCKTQASDLLERATVSAWPGTTLNLLKFPMLRPSSIRLYE 437
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 9/175 (5%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
+DTPG ++P + L +E +K ++PRT +K G + GL R+D +
Sbjct: 521 FDTPGTINPSQILTLLTLEELMRTLPKKLIKPRTVLIKPGMTYFLAGLGRIDYVDGP-HS 579
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIR-LQPPIGQDRASELGTW---KDRKLKVS 570
+ +T AS ++ L L ++AD+++ +G L P G ++ L W + + V+
Sbjct: 580 LLLTTLASSDLPLTLIDHQDADQMYAELLGSPILAVPFGSEK--RLKHWPGLSGKDITVT 637
Query: 571 GTSWDVNGIDIAAAGLGWFSL-GLKG-EASLTLWTYDGIEITLREPLVLDRAPFL 623
G W + +DI + GW ++ G +G + L +T G I +R P +L RA L
Sbjct: 638 GVGWKESAVDIVLSSAGWVAVTGEEGTKYKLKAYTPYGRGIHVRTPPLLPRAVML 692
>gi|398019280|ref|XP_003862804.1| hypothetical protein, conserved [Leishmania donovani]
gi|322501035|emb|CBZ36112.1| hypothetical protein, conserved [Leishmania donovani]
Length = 918
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 175/488 (35%), Gaps = 146/488 (29%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
C RCH+L N G V+ PDF D++ A + K VVV+VVD DF G
Sbjct: 364 TCHRCHALENLG-VEGRRKVWSAPDFT-DQLRALKEKK-------CVVVLVVDITDFPGS 414
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ---------------VSP 351
D L +++ K+D + ++ VS
Sbjct: 415 M--------------VYDLPGLISMNNSVIIAVNKMDCIRNRSFNYASKDRSVAACLVSE 460
Query: 352 TRLDRWVRHRAKAGGAPK--LNGVYLVSARKDLGVRNLLAFIKELAG-----PRGNV--W 402
+ + RWV A G P+ + V +SA++ G+ +L++ I++ A P + +
Sbjct: 461 SYVRRWVMDIAVQFGLPQHQIKKVVPLSAKRGWGITHLISAIEDAANLNLRRPHKPLPTY 520
Query: 403 VIGAQNAGKSTLINTFAK------------------------------------------ 420
+G N GKS++IN A
Sbjct: 521 FVGVANVGKSSVINAMAHALYVPQPPHPESRKVYYTKTDAQGKNAVFWRWYTPPNVNQAE 580
Query: 421 ------KEGVKVSKL-TEAPIPGTTLGI--------------------LRIGGILPAKAK 453
+ K SKL T + +PGTT+ + L G P KA
Sbjct: 581 MLDIRGRHDKKASKLMTVSSLPGTTVAVNAVRLSLGPTAHTAKQERQRLSEGATAPGKAD 640
Query: 454 --------LYDTPGLL-HPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMR 504
+YDTPGLL H H S+ L + + IRK P+ + + G + +GGL
Sbjct: 641 DVAGTQTYIYDTPGLLPHWHQRSL-LTLLQMRRTLIRKFRNPQCFLLLPGHTLFLGGLAA 699
Query: 505 LDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPP-------------- 550
+D+ + + V+ S V + +D W+ +G L PP
Sbjct: 700 VDVVRGPPRGLLFLVYTSQKVRNAIVNTVQSDAFWREQLGKALDPPGSYEQLLPLDDLST 759
Query: 551 -IGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGI 607
G R SE ++ + G D+ GLGW S + A + L T G+
Sbjct: 760 AAGPPRLSETRSY---LFECYGRHRRRPKADLYVCGLGWTSFCVSEPADVVLRVRTLPGV 816
Query: 608 EITLREPL 615
+REPL
Sbjct: 817 VHGVREPL 824
>gi|47200956|emb|CAF87804.1| unnamed protein product [Tetraodon nigroviridis]
Length = 379
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 16/142 (11%)
Query: 324 DDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA----KAGGAPKLNGVYLVSAR 379
D A+L +V++G KVDLLP+ SP L R R + +AG ++ V+L+SA+
Sbjct: 144 DLAELVGTNKHVVVLGNKVDLLPAD-SPNHLQRIRRRLSGYCREAGFGDQVADVHLISAK 202
Query: 380 KDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT-----FAKKEGVKVS-KLTEAP 433
GV L ++ G+V+++G NAGKSTL NT + K +V+ K T +P
Sbjct: 203 TGYGVEALRSWKYN-----GDVYLVGVANAGKSTLFNTLLESDYCKSRASEVTRKATISP 257
Query: 434 IPGTTLGILRIGGILPAKAKLY 455
PGTTL +LR + P +L+
Sbjct: 258 WPGTTLNLLRFPIMNPTPHRLF 279
>gi|195024484|ref|XP_001985881.1| GH21055 [Drosophila grimshawi]
gi|193901881|gb|EDW00748.1| GH21055 [Drosophila grimshawi]
Length = 649
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 35/224 (15%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
+ C RCH L++Y N+ D + + + + A + +++VD +DF
Sbjct: 169 QTITCQRCHFLQHY---------NIALDVEVPPSVYVETISRIQDKYA-LAIIIVDLLDF 218
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP--SQVSPTRLDRWVRHR 361
S++ +++ L K P + LVG KVDLLP S T + R ++ +
Sbjct: 219 --------PSSIWPGMQQV-----LGAKRP-VFLVGNKVDLLPRDSNGYLTHVKRCLKQQ 264
Query: 362 -AKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT- 417
+ GG LN V L+SA+ G+ L+ + + +G+V+++G N GKS+L N
Sbjct: 265 FIEHGGFDALNIKNVSLISAKTGFGIEELITQLHKNWQYKGDVYLLGCTNVGKSSLFNIL 324
Query: 418 ----FAKKEGVK-VSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
+ + E + V K T PGTTL +L+ + P+ ++Y
Sbjct: 325 LNSDYCRPEATELVRKATTCAWPGTTLQMLKFPILRPSDLRVYQ 368
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
+YDTPG++ P ++ L E ++ + L+PR RV ++ +GGL R+DL + E
Sbjct: 445 VYDTPGVMQPDQLTPMLTTQELLQLQPTRMLKPRAVRVAPKMSLFLGGLARVDLLDCNQE 504
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQP-PIGQDRASELGTW-----KDRKL 567
+ + V+A+ + L + + AD I+K ++G L PI + L W DR +
Sbjct: 505 WLKLFVFAAETLPLLITDTQQADAIYKRYLGTSLLGLPISGEDDERLQRWPGLQCMDRDI 564
Query: 568 KVSGTSWDVN------GIDIAAAGLGWFSLGL--KGEASLTLWTYDGIEITLREPLVLDR 619
V + + DI + GW L L E+S LWT I +R+P ++
Sbjct: 565 LVQNGASENRFAEKQLNCDITLSSAGWLGLLLPENTESSWRLWTPKATGIYVRKPALIPL 624
Query: 620 A 620
A
Sbjct: 625 A 625
>gi|380014450|ref|XP_003691245.1| PREDICTED: nitric oxide-associated protein 1-like [Apis florea]
Length = 419
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 112/265 (42%), Gaps = 61/265 (23%)
Query: 246 TVCARCHSLRNYG-----QVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
T+C RCH L+ Y +V E NL+ +VI T+ +++++D
Sbjct: 185 TICQRCHFLKFYNSALEVKVSIEDYPNLL------KVIKTK---------KCAIILIIDL 229
Query: 301 VDFD-GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR 359
DF ++P D + + LVG KVDLLP SP L+ +
Sbjct: 230 TDFPCSIWP---------------DLKSIMHPFTPIFLVGNKVDLLPRD-SPKFLENIKQ 273
Query: 360 HRAKA----GGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
A G K N + L+SA+ G+ L+ ++ +G+V+++G N GKS+
Sbjct: 274 LLANTVVHVTGVKKENITHIQLISAKTGYGIEQLINKLQHKWRYKGDVYLVGCTNVGKSS 333
Query: 414 LINTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMS 467
L NT + K V + T + PGTTL +L+ + P + K S
Sbjct: 334 LFNTLLNSDYCKVQAVDLVQRATVSAWPGTTLNLLKFPILNPNRKK------------YS 381
Query: 468 MRLNRDEQKMVEIRKELQPRTYRVK 492
+R+ R ++ +E + R Y+ K
Sbjct: 382 LRIQRLIKEKFYRMQESKYRDYKFK 406
>gi|5541712|emb|CAB51217.1| putative protein [Arabidopsis thaliana]
Length = 441
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 33/257 (12%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA--GVVVMVVDCVDFD 304
+C RC L ++G + V N V A L + + ++V +VD VDF+
Sbjct: 144 ICGRCQ-LLSHGHMITAVGGNGGYPGGKQFVSADELREKLSHLRHEKALIVKLVDIVDFN 202
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F R + L A ++LV TK+DLLP + WV +
Sbjct: 203 GSFLARV-----RDLVGAN----------PIILVITKIDLLPKGTDMNCIGDWV---VEV 244
Query: 365 GGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN----TF 418
KLN V+L S++ GV + + I++ R +V+++GA N GKS IN T
Sbjct: 245 TMRKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKGR-DVYILGAANVGKSAFINALLKTM 303
Query: 419 AKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
A+++ V + K ++ +PGTTLG ++I + + KLYDTPG+ H + ++ D+
Sbjct: 304 AERDPVAAAAQKYKPIQSAVPGTTLGPIQINAFVGGE-KLYDTPGVHLHHRQAAVVHSDD 362
Query: 475 QKMVEIRKELQPRTYRV 491
+ + L+ +++ V
Sbjct: 363 LPALAPQNRLRGQSFDV 379
>gi|156372752|ref|XP_001629200.1| predicted protein [Nematostella vectensis]
gi|156216194|gb|EDO37137.1| predicted protein [Nematostella vectensis]
Length = 500
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 90/168 (53%), Gaps = 5/168 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG++ + ++ L E K++ + + PRT ++ GQ + +GGL RLD +A+ +
Sbjct: 325 FYDTPGIISENQITSYLTLKEIKLLSPNRWMVPRTLILRPGQTLLLGGLGRLDFLKAN-K 383
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIR-LQPPIG-QDRASELGTWKDRKLKVSG 571
+IY TV+ASPN+ +H+ AD + H G L+ P G + R + +L + G
Sbjct: 384 SIYFTVFASPNLPVHVLNTLKADNFLQQHGGSNILKVPCGDEKRMALFPPLLPHELSLVG 443
Query: 572 TSWDVNGIDIAAAGLGWFSL--GLKGEASLTLWTYDGIEITLREPLVL 617
W + D+ + GW ++ G+ + SL +T +G + +R P +L
Sbjct: 444 AGWGESAADVVLSNAGWVAVTAGMGADVSLKAYTPNGRGVGVRIPALL 491
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 36/229 (15%)
Query: 228 KAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSG 287
+AE+ + + + +C RC LR Y + IP + T+ +
Sbjct: 20 RAEKHPEKQRSYYANESQVICQRCFDLRYYSKA--------IPTL-VNTAQVTKFLSHIS 70
Query: 288 NANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPS 347
A +++ VVD +D G S F L + AK ++V+V KVD+LP
Sbjct: 71 RRKA-LILYVVDILDLPG--------STFPHLLDIVGPAK------RIVIVANKVDMLPQ 115
Query: 348 QVSP----TRLDRWVRHRAKAGG--APKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNV 401
P RL V + G + + V LVSA++ GV L+ I G++
Sbjct: 116 DGRPWLQEKRLREEVLRLCREHGLESGNVKDVCLVSAKEGFGVPQLVQKILVHWDHDGDI 175
Query: 402 WVIGAQNAGKSTLINTFA------KKEGVKVSKLTEAPIPGTTLGILRI 444
+++G N+GK+TL NTF K+ G + + T + PGTT+ ++R
Sbjct: 176 YMLGCSNSGKTTLFNTFMDLLNVHKRRGNMLQRSTVSKWPGTTMSLMRF 224
>gi|224139212|ref|XP_002326796.1| predicted protein [Populus trichocarpa]
gi|222834118|gb|EEE72595.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 125/274 (45%), Gaps = 38/274 (13%)
Query: 230 ERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNA 289
E KK+ R+ + +C RC L ++G + V N V A L + +
Sbjct: 133 ELKKRHRQLR-----TVLCGRCR-LLSHGHMITAVGGNGGYSGGKQFVSADELREKLSHL 186
Query: 290 NA--GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPS 347
++V +VD VDF+G F R + L A ++LV TKVDLLP
Sbjct: 187 RHEKALIVKLVDVVDFNGSFLAR-----LRDLVGANP----------IILVVTKVDLLPR 231
Query: 348 QVSPTRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIG 405
+ WV +A KL+ V+L S++ +G+ +++ I+ R +V+++G
Sbjct: 232 DTDLNCVGDWV---VEATTKKKLSVLSVHLTSSKSLVGIAGVVSEIQREKKGR-DVYILG 287
Query: 406 AQNAGKSTLINTFAKKEGV--------KVSKLTEAPIPGTTLGILRIGGILPAKAKLYDT 457
+ N GKS I+ K + + K ++ +PGTTLG ++I L KLYDT
Sbjct: 288 SANVGKSAFISALLKTMALRDPAAAAARKYKPIQSAVPGTTLGPIQIDAFL-GGGKLYDT 346
Query: 458 PGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRV 491
PG+ H + ++ ++ + R L+ +++ V
Sbjct: 347 PGVHLHHRQAAVVHSEDLPALAPRSRLKGQSFPV 380
>gi|332024512|gb|EGI64710.1| Uncharacterized protein C4orf14-like protein [Acromyrmex
echinatior]
Length = 532
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 36/222 (16%)
Query: 245 VTVCARCHSLRNYGQ-VKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
V +C RCH + Y ++ +V+ + P +VI T+ V+++VD DF
Sbjct: 67 VMICQRCHFMHYYNTTLEVKVSADEYPKLL--KVIRTK---------KCAVILMVDLTDF 115
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP--SQVSPTRLDRWVRHR 361
S++ ++ + L + +VG KVDLLP S+ T + +
Sbjct: 116 PC--------SIWPEINS------VLHPLTPVFVVGNKVDLLPQDSKYFFTHIKDCLLKA 161
Query: 362 AKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
++ K N + L+SA+ G+ L+ + + +G+V++IG N GKS+L N
Sbjct: 162 MESTKIKKENIRHIELISAKTGYGIEELINKLHNIWKYKGDVYIIGCTNVGKSSLFNALL 221
Query: 420 KKEGVKV------SKLTEAPIPGTTLGILRIGGILPAKAKLY 455
+ + KV + T +P PGTTL +L+ + P + +LY
Sbjct: 222 QSDYCKVQAVDLIQRATISPWPGTTLNLLKFPILNPKRKRLY 263
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 5/170 (2%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
YDTPG + P + L E V +K + PRT+ + Q + +GG+ RLD + +
Sbjct: 341 YDTPGTIQPAQILDLLTTQELLSVLPKKIISPRTFILHVNQTIFLGGIGRLDYVEGNT-F 399
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIR--LQPPIGQDRASELGTWKDRKLKVSGT 572
I T+++S + + L E+AD ++ + + P DR ++++++G
Sbjct: 400 IRCTIFSSNELPITLTHTEDADNVYDELLKTEAFVVPENNPDRLKHWPPLVSKEMEITGV 459
Query: 573 SWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLVLDRA 620
+ + DI + GW ++ + + + L W G + LR P +L ++
Sbjct: 460 GQNESISDIVLSSAGWIAIAAEKDERVLLKAWNPQGRGLHLRTPALLKKS 509
>gi|82793285|ref|XP_727980.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23484093|gb|EAA19545.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 1768
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 118/260 (45%), Gaps = 29/260 (11%)
Query: 396 GPRG-NVWVIGAQNAGKSTLINTFAKKEGVKVSK---------LTEAPIPGTTLGILRIG 445
P+ N++++G N+GKSTLIN K + +K ++ + IPGTTL ++I
Sbjct: 1517 NPKNVNLYIVGNANSGKSTLINYLLKNLSNEKNKNMNSNNNFLISNSIIPGTTLKNIKIK 1576
Query: 446 GILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMV---EIRKELQPRTYRVKGGQAVHVGGL 502
L + DTPG++ + + LN DE K V +++K++ P Y + + +GG+
Sbjct: 1577 --LNKNLTINDTPGIISNNSILSYLNFDEMKYVVCTKMKKKI-PSIY-INENDYIFIGGI 1632
Query: 503 MRLDLDQASVETIYVTVWASPNVSLHLGKIENAD--EIWKNHVGI-RLQPPIGQDRASEL 559
+ +++ ++ + S + + K + D E K + L PP DR +E+
Sbjct: 1633 VYINILNIKKYYSIMSFFMSDKIPIIKRKRFSKDPKEFLKKKIQSGYLYPPFSVDRFNEI 1692
Query: 560 GTWKDRKLKVSG--TSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVL 617
+K ++ + D + DI G+G + L+T +++ R L+
Sbjct: 1693 NDYKKCYFNINNPYVNIDNSSYDIHIQGMGCITFYSFQNIEFDLYTLKNVDVVGRPSLM- 1751
Query: 618 DRAPFLERPG---FWLPKAI 634
P+ ++ G F + K I
Sbjct: 1752 ---PYHKKYGMLDFSVKKKI 1768
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 27/152 (17%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDF---------DFDRVIATRLMKPSGNANAGVVVMV 297
+C RC L+ KN++ NLI ++ DF++ + K ++ +
Sbjct: 1274 ICERCFDLK----YKNKIKNNLIINYSNNNEISAHDFEKYVINIFKKKC------FIIYI 1323
Query: 298 VDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRW 357
VD +D ++ + LFK ++ D KK+ KVDLL T + +
Sbjct: 1324 VDILD---LYIYSNLQKLFKIYKKLHSDK---KKVEGFYFCINKVDLLKGYKEFT-VKTY 1376
Query: 358 VRHRAKAGGAPKL-NGVYLVSARKDLGVRNLL 388
V + K L N ++L+SA+ V+ L+
Sbjct: 1377 VHNFLKNNKINILFNNIFLISAKTGYNVKKLI 1408
>gi|350418813|ref|XP_003491975.1| PREDICTED: uncharacterized protein C4orf14 homolog [Bombus
impatiens]
Length = 751
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 10/173 (5%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
YDTPG + + L DE + ++ + PRT+ + Q V V G+ RLD +
Sbjct: 558 YDTPGTIQSDQILNLLTTDELSLTLPQEIITPRTFMFRPKQTVFVAGMGRLDYLEGE-HF 616
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIR-LQPPIGQDRASELGTWKDRKLK----V 569
I T++AS ++ + + + +ADE++ +G + PI D + L W K K +
Sbjct: 617 IRCTLFASEHLPITMCRTTDADEVYDRLLGTSAFRVPI--DDSERLKVWPKLKPKEIREI 674
Query: 570 SGTSWDVNGIDIAAAGLGWFSLG-LKGEA-SLTLWTYDGIEITLREPLVLDRA 620
+G + + + D+ + +GW ++ L+ E+ SL WT +G I LR P +L ++
Sbjct: 675 TGVNGEESVADVVLSSIGWIAITPLENESVSLRAWTPEGRGIYLRCPALLKKS 727
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 39/220 (17%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFD-G 305
C RCH L+ Y N E + D+ +++ R++K A V++++D DF
Sbjct: 279 TCQRCHFLKFY----NTALEVKVSIEDYPKLL--RVIKSKKCA----VILIIDLTDFPCS 328
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR----WVRHR 361
++P D + + LVG KVDLLP+ SP+ L+ +
Sbjct: 329 IWP---------------DLKSVLHPFTPIFLVGNKVDLLPTD-SPSFLENVKQCLLDSV 372
Query: 362 AKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
G + N V L+SA+ G+ +L+ ++ +G+V+++G N GKS+L NT
Sbjct: 373 IGVTGVKRENITHVQLMSAKTGYGIEHLINKLQYKWRHKGDVYLVGCTNVGKSSLFNTLL 432
Query: 420 KKEGVKVSKL------TEAPIPGTTLGILRIGGILPAKAK 453
+ KV + T + PGTTL +L+ + P K
Sbjct: 433 NSDYCKVQAIDLVQRATVSAWPGTTLNLLKFPILNPTDKK 472
>gi|383422155|gb|AFH34291.1| mitochondrial nitric oxide synthase [Macaca mulatta]
Length = 698
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTWKDRKLKVSG 571
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + + + G
Sbjct: 553 SAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGKERMAGFPPLVAEDIMLKG 612
Query: 572 TSWDVNGI-DIAAAGLGWFSL--GLKGEASLTLWTYDGIEITLREPLV 616
+ DI + GW S+ +KG L +T +G +T+R PL+
Sbjct: 613 GRGGSEAVADIKFSSAGWVSVTPNVKGRLHLRGYTPEGTVLTVRPPLL 660
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 42/151 (27%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP Q +P R +R R A+AG AP G
Sbjct: 242 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWDDCARAGLLLAPGHQGPQIPVKNEPQDGEN 299
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 300 SNPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL 359
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRI 444
K + + T +P PGTTL +L+
Sbjct: 360 ESDYCTAKGSEAIDRATISPWPGTTLNLLKF 390
>gi|328776445|ref|XP_396974.4| PREDICTED: uncharacterized protein C4orf14-like [Apis mellifera]
Length = 546
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 49/226 (21%)
Query: 246 TVCARCHSLRNYG-----QVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
T+C RCH L+ Y +V E NL+ +VI T+ ++++VD
Sbjct: 185 TICQRCHFLKFYNSALEVKVSIEDYPNLL------KVIKTK---------KCAIILIVDL 229
Query: 301 VDFD-GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR--- 356
DF ++P D + + LVG KVDLLP SP L+
Sbjct: 230 TDFPCSIWP---------------DLKTIMHPFTPIFLVGNKVDLLPRD-SPKFLENIKQ 273
Query: 357 -WVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKST 413
+ G K N V L+SA+ G+ L+ ++ +G+V+++G N GKS+
Sbjct: 274 LLTNTVVQVTGVKKENITHVQLISAKTGYGIEQLINKLQYKWRYKGDVYLVGCTNVGKSS 333
Query: 414 LINTFAKKEGVKVSKL------TEAPIPGTTLGILRIGGILPAKAK 453
L NT + KV + T + PGTTL +L+ + P K
Sbjct: 334 LFNTLLNSDYCKVKAIDLVQCATVSTWPGTTLNLLKFPILNPNMKK 379
>gi|383849691|ref|XP_003700478.1| PREDICTED: nitric oxide-associated protein 1-like [Megachile
rotundata]
Length = 739
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 122/280 (43%), Gaps = 54/280 (19%)
Query: 240 KEKGEVTVCARCHSLRNY-GQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVV 298
+E ++T+C RCH L+ Y +K V+ I D+ +L+K ++ +VV
Sbjct: 260 EEDLKLTICQRCHFLKFYKAALKVNVS---IEDY-------PKLLKVIKRKKCAII-LVV 308
Query: 299 DCVDFD-GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP----SQVSPTR 353
D DF ++P D + + LVG KVD LP ++V TR
Sbjct: 309 DLTDFPCSIWP---------------DLKSIMHPFTPIFLVGNKVDALPRDRSTEVFLTR 353
Query: 354 LDRWVRHRA-KAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
+ + + G K N V ++SA G+ L+ ++ RG+V+++G N G
Sbjct: 354 IKQLLADTVVDITGISKKNIMHVEIISALTKFGIEQLINKLQYKWSVRGDVYLVGCTNVG 413
Query: 411 KSTLINTFAKKEGVKVSKL------TEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPH 464
KSTL N + KV + T +P PGTTL +L+ + +
Sbjct: 414 KSTLFNVLLNSDYCKVQAIDLIPRSTVSPWPGTTLNLLKFPLLNMNSERC---------E 464
Query: 465 LMSMRLNRDE---QKMVEIRKELQPRTYRVKGGQAV-HVG 500
L + RL R++ Q++++ R E RT ++K HVG
Sbjct: 465 LRTRRLMREQPLKQELMKYRNEEFKRTRKIKYATLKGHVG 504
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 14/174 (8%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
YDTPG + + L DE + + + PRT+ K V V GL RLD
Sbjct: 548 YDTPGTVQTDQILDLLTTDELMLTLPKVTVLPRTFDFKPQHTVFVAGLGRLDYVDGR-RL 606
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSW 574
I T++ S + + + + ADE++ + + + L W K+ +
Sbjct: 607 IRCTLFTSNELPITICYTDVADEVYDQLLETEAF-VVPSNEPERLRVWP----KLESKEY 661
Query: 575 DVNGI------DIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLVLDRA 620
+V GI DI + GW ++ + L WT G I LR P +L ++
Sbjct: 662 EVTGIYKESAADIVLSNAGWIAITPAKNEKVVLRAWTPQGRGIHLRRPALLSKS 715
>gi|149035169|gb|EDL89873.1| MMR_HSR1 domain containing protein RGD1359460, isoform CRA_a
[Rattus norvegicus]
Length = 694
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + PRT+ +K G + +GG+ R+D Q + +
Sbjct: 496 FYDTPGITKENCILNLLTEKEIDIVLPTHSIIPRTFVLKPGMVLFLGGIARVDFLQGN-Q 554
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG--IRLQPPIGQDRASELG--TWKDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G + L P G++R ++ +D LK
Sbjct: 555 SAWFTVVASNFLPVHISSLDKADALYEKHAGQELLLVPMGGKERMAQFPPLVAEDITLKG 614
Query: 570 SGTSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
G + V I ++A GW ++ E +L L +T +G +T+ P++
Sbjct: 615 GGEAEAVADIKFSSA--GWVAVTPYSEGTLHLRAYTPEGTALTVHPPVL 661
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 41/162 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRH------RAKAGGAPKLNG--------------- 372
+L ++G KVDLLP Q +P L R + RA AP G
Sbjct: 243 QLFVLGNKVDLLP-QDAPGYLQRLRKRLWNDCIRAGLVVAPGHRGPQYPTGNEPLDEIKN 301
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++G NAGKSTL NT
Sbjct: 302 QNPSSRSRTVVKDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGTTNAGKSTLFNTLL 361
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P +++
Sbjct: 362 ESDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 403
>gi|162447756|ref|YP_001620888.1| GTP-binding protein [Acholeplasma laidlawii PG-8A]
gi|161985863|gb|ABX81512.1| GTP-binding protein [Acholeplasma laidlawii PG-8A]
Length = 342
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 125/297 (42%), Gaps = 53/297 (17%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C C+ L +YG+ + + +P+F+ ++V+V + D M
Sbjct: 34 CKSCYQLMHYGKAEGHSHPDNLPNFE----------------KKSLIVVVTSLLYLDSML 77
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGA 367
S K+L + K+V + ++DLLP S L ++ +
Sbjct: 78 -----NSEVKRLGDNY----------KVVYLINQIDLLPDATSKNFLLGKIQKSFRLNRV 122
Query: 368 PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA-KKEGVKV 426
+ L+SA + +L ++K P N+++IG QN+GK+T+ KE + +
Sbjct: 123 -SYEDIVLMSALNPYDIDHLKGYLKSFNVP--NIYLIGLQNSGKTTIFKALTGNKEALSL 179
Query: 427 SKLTEAPIPGTTLGILRIGGILPAK---AKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
K A + T +L AK +YDTPGL + + K + +K+
Sbjct: 180 PK---AALTQT---------MLHAKFDNLNIYDTPGLYQGGYLHEFFEYKDYKDLLPQKQ 227
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
PR +K GQ++ +GGL+ + + + ++ T++ S V H+ +N + I K
Sbjct: 228 FNPRNGTLKSGQSLMIGGLVNISVLKGETKS---TLYVSDYVKHHITSSDNVENILK 281
>gi|68070655|ref|XP_677239.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497276|emb|CAH97846.1| conserved hypothetical protein [Plasmodium berghei]
Length = 1051
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 28/255 (10%)
Query: 400 NVWVIGAQNAGKSTLINTFAK---KEGVKVSK------LTEAPIPGTTLGILRIGGILPA 450
N++++G N+GKSTLIN K KE K ++ + IPGTTL ++I L
Sbjct: 805 NLYIVGNANSGKSTLINYLLKSLTKEKSKNMNSNNNFLISNSIIPGTTLKNIKIK--LNN 862
Query: 451 KAKLYDTPGLLHPHLMSMRLNRDEQKMV---EIRKELQPRTYRVKGGQAVHVGGLMRLDL 507
+ DTPG++ + + LN DE K V +++K++ P Y + + +GG++ +++
Sbjct: 863 NLTINDTPGIISNNSILSYLNFDEMKYVVCTKLKKKI-PSIY-INENDYIFIGGIVYINI 920
Query: 508 DQASVETIYVTVWASPNVSLHLGKIENAD--EIWKNHVGI-RLQPPIGQDRASELGTWKD 564
++ + S + + K + D E K + + PP DR +E+ +K
Sbjct: 921 LNIKKYYSIMSFFMSDKIPIIKRKRFSKDPKEFLKKKIQSGYIYPPFSVDRFNEISDFKK 980
Query: 565 RKLKVSG--TSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPF 622
++ + D + DI GLG + L+T +++ R L+ P+
Sbjct: 981 CHFNINNPYVNTDNSSYDIHIQGLGCITFYSFQNIEFDLYTLKNVDVIGRPSLM----PY 1036
Query: 623 LERPG---FWLPKAI 634
++ G F + K I
Sbjct: 1037 HKKYGMLDFSVKKKI 1051
>gi|301616297|ref|XP_002937599.1| PREDICTED: uncharacterized protein C4orf14-like [Xenopus (Silurana)
tropicalis]
Length = 710
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 31/184 (16%)
Query: 286 SGNANAGVVVMVVDCVDF-DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDL 344
S G+V+ +VD +D D +FP L + E K ++++G KVDL
Sbjct: 237 SIQTKKGLVLFMVDMLDIPDSIFP-----DLIDIVGENKS----------ILVLGNKVDL 281
Query: 345 LPSQVSPTRLDRWVR-----HRAKAG--GAPKLNGVYLVSARKDLGVRNLLAFIKELAGP 397
LP SP L ++++ + KAG + V+L+SA+ GV L++ +++
Sbjct: 282 LPGD-SPGYL-KYLKGQLHDYCTKAGLNWMGNITDVHLLSAKTGYGVEELISKLQQSWKY 339
Query: 398 RGNVWVIGAQNAGKSTLINTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAK 451
+G+V+++GA NAGKSTL NT + + K + + T +P PGTTL +L+ + P
Sbjct: 340 KGDVYLVGATNAGKSTLFNTLLQSDYCKEKASEIIKEATISPWPGTTLDLLKFPIVNPKP 399
Query: 452 AKLY 455
+++
Sbjct: 400 YRMF 403
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG++ + L E K K + PRT+ + G + + L R+D Q
Sbjct: 497 FYDTPGIVKEGCVLNLLKDKEVKAALPTKAIIPRTFILSPGMTLFLAALGRIDFLQGE-R 555
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHV-GIRLQPPI-GQDRASELGTW--KDRKLKV 569
+ +V AS + +H+ ++ AD+I+ H G L PI G++R E +D KLK
Sbjct: 556 PAWFSVIASNLLPVHITSLDKADDIYTKHAGGTLLGVPIGGEERMKEFPPLLPQDIKLKG 615
Query: 570 SGTSWDVNGIDIAAAGL 586
G S V I ++ AGL
Sbjct: 616 IGASRAVADIKLSTAGL 632
>gi|260828333|ref|XP_002609118.1| hypothetical protein BRAFLDRAFT_115313 [Branchiostoma floridae]
gi|229294472|gb|EEN65128.1| hypothetical protein BRAFLDRAFT_115313 [Branchiostoma floridae]
Length = 395
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 98/219 (44%), Gaps = 35/219 (15%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RC L N+ + D R ++ P +++++VD +DF
Sbjct: 24 CQRCVLLANH---------KIALDVQVSRDHYVEVLSPLKEKKNALIILMVDLLDFPC-- 72
Query: 308 PKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRL---DRWVRHRAKA 364
S+F L + L K LV+VG K DLLP + + D +A
Sbjct: 73 ------SIFPNLLD------LVGKEKWLVVVGNKFDLLPPDGTTYKRRTEDELFMACLRA 120
Query: 365 G--GAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT----- 417
G + V L+SA+ GV L+ I+ + G RG+V+++G N GKSTL N
Sbjct: 121 GLHDNKNIKHVCLISAKTGFGVEKLITEIQTMWGYRGDVYLLGNTNVGKSTLFNRLLESD 180
Query: 418 FAKKEGVKV-SKLTEAPIPGTTLGILRIGGILPA-KAKL 454
F +++ +V + T + PGTTL +LR I P KA+L
Sbjct: 181 FCQQKAEEVFQRATISQWPGTTLNLLRFPMINPTRKARL 219
>gi|255075677|ref|XP_002501513.1| GTPase [Micromonas sp. RCC299]
gi|226516777|gb|ACO62771.1| GTPase [Micromonas sp. RCC299]
Length = 597
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 71/141 (50%), Gaps = 11/141 (7%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGV-RNLLAFIKE 393
++LV TK DLLP+ L W R + L G+ VS RK GV +++ A E
Sbjct: 198 ILLVLTKCDLLPNGTDLALLKEWARREVEVRRRLTLAGIECVSGRKGDGVDKSVTAMFAE 257
Query: 394 LAGPRGNVWVIGAQNAGKSTLINTFAKKE------GVKVSKL-TEAPIPGTTLGILRIGG 446
G +V+VIG+ N GKST I K GV +L T + +PGTTLGI+ +
Sbjct: 258 RKGR--DVYVIGSANVGKSTFIRAALKSMRELGNFGVPAKRLPTASAMPGTTLGIIPLRA 315
Query: 447 ILPAKAKLYDTPGLLHPHLMS 467
+ LYDTPG+ H M+
Sbjct: 316 -FEGRGTLYDTPGVFLHHRMN 335
>gi|340722480|ref|XP_003399633.1| PREDICTED: uncharacterized protein C4orf14 homolog [Bombus
terrestris]
Length = 753
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 39/219 (17%)
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFD-GM 306
C RCH LR Y N E + D+ +++ R++K A V++++D DF +
Sbjct: 282 CQRCHFLRFY----NTALEVKVSIEDYPKLL--RVIKSKKCA----VILIIDLTDFPCSI 331
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDR----WVRHRA 362
+P D + + LVG K+DLLP+ SP+ L+ V
Sbjct: 332 WP---------------DLKSILHPFTPIFLVGNKIDLLPTD-SPSFLENVKQCLVDSVI 375
Query: 363 KAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
G + N V L SA+ G+ +L+ ++ +G+V+++G N GKS+L NT
Sbjct: 376 NVTGVKRENITHVQLTSAKTGYGIEHLINKLQYKWRHKGDVYLVGCTNVGKSSLFNTLLN 435
Query: 421 KEGVKVSKL------TEAPIPGTTLGILRIGGILPAKAK 453
+ KV + T + PGTTL +L+ + P K
Sbjct: 436 SDYCKVQAIDLVQRATVSAWPGTTLNLLKFPILNPTDEK 474
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 10/173 (5%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
YDTPG + + L DE + ++ + PRT+ K Q V V G+ RLD +
Sbjct: 560 YDTPGTIQADQILNLLTTDELSLTLPQEIITPRTFMFKPKQTVFVAGMGRLDYLEGE-HF 618
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIR-LQPPIGQDRASELGTWKDRKLK----V 569
I T++AS + + + +ADE++ +G PI D + L W K K +
Sbjct: 619 IRCTLFASKYLPITICCTADADEVYDRLLGTSAFLVPI--DDSERLKVWPKLKPKEIREI 676
Query: 570 SGTSWDVNGIDIAAAGLGWFSLG-LKGEA-SLTLWTYDGIEITLREPLVLDRA 620
+G + + D+ + +GW ++ L+ E+ SL WT +G I LR P +L ++
Sbjct: 677 TGVDGEESVADVVLSSIGWIAITPLENESVSLRAWTPEGRGIYLRCPALLKKS 729
>gi|196013785|ref|XP_002116753.1| hypothetical protein TRIADDRAFT_60700 [Trichoplax adhaerens]
gi|190580731|gb|EDV20812.1| hypothetical protein TRIADDRAFT_60700 [Trichoplax adhaerens]
Length = 659
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 20/221 (9%)
Query: 454 LYDTPGLLHPHLMSMRLN-RDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASV 512
YDTPG + ++ + LN RD K++ + + PRT R++ Q++ + GL R+D +
Sbjct: 447 FYDTPGAMSQNMYTDLLNTRDLSKVLPL-GGITPRTLRLQPSQSIFLAGLGRIDYIEGP- 504
Query: 513 ETIYVTVWASPNVSLHLGKIENADEIWKNHVGIR-LQPPIGQDRASELGTW-----KDRK 566
+Y T +AS + LH+ + AD+I+ H G L+ P ++ + ++ K+
Sbjct: 505 SRVYFTFFASRELPLHICQTMKADDIYDKHFGYSLLKIPNNMNKQYQGKSFPRLQGKEFT 564
Query: 567 LKVSGTSWDVNGIDI--AAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLVLDRAPFLE 624
K W + DI ++AG + GL E + +T +G+ + LR P V+ P+
Sbjct: 565 FKCH-NGWKYSSADILLSSAGFAAITAGLGDEIKIKAYTPNGLGLILRRPSVM---PYSV 620
Query: 625 RPGFWLPKAISDALGSKSKLEAKRRKKLEETEDFLSEVSAY 665
W K G L + R+K++E F+ ++ Y
Sbjct: 621 N---WKGKPHGKKQGYYKGLFS--RQKMKEQFPFIQSINPY 656
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 37/223 (16%)
Query: 232 KKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANA 291
++K + + +C RC L +Y Q N A P+ D+ I ++ K +
Sbjct: 174 QRKLVDVPASQVSSIICQRCFCLNHYNQALNMNA----PEDDWRNHIQ-KIPK-----DK 223
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLL----PS 347
+V++VVD DF G S+F L + + K+P ++L+ K+D+L P
Sbjct: 224 CIVMLVVDIFDFPG--------SIFPNLLDI-----IGYKVP-ILLIANKMDVLLEDGPG 269
Query: 348 QVSPTRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIG 405
+ R+ V K G + N + LVSARK+ G++ ++ + + P G+++++G
Sbjct: 270 HIE--RIQTMVWEGCKNAGLTEGNLVDICLVSARKNQGIKEVVDKVLQHRPPHGDIFLLG 327
Query: 406 AQNAGKSTLINT-----FAKKEGVKVSKLTEAPIPGTTLGILR 443
N GKS+L + + K + T + PGTT+G+LR
Sbjct: 328 CTNVGKSSLFKSLLDYLYDGKPKTLMRYPTISVWPGTTIGLLR 370
>gi|405977813|gb|EKC42247.1| Uncharacterized protein C4orf14-like protein [Crassostrea gigas]
Length = 820
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 115/248 (46%), Gaps = 46/248 (18%)
Query: 236 REAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVV 295
+E KE+ + + C +CH ++ + + + A + DR A +MK +V+
Sbjct: 311 KEMTKEELKDSKCQKCHKMQYHKTLIDIRATD-------DR--AHEIMKEIQENRRCMVM 361
Query: 296 MVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLD 355
++VD +D + P LF++L + + P + ++G KVD++P Q P LD
Sbjct: 362 LIVDLLDIENSIP-----DLFREL--------IPSRKP-IFVIGNKVDIIP-QDHPDYLD 406
Query: 356 RWVRHRAKAG---GAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAG 410
+ A G + N V L+SA+ GV L++ + + G G+V++IG N+G
Sbjct: 407 SVHQTLVDACINCGLEQHNVKHVTLISAKTGFGVETLISKLLQDWGMSGDVYMIGTANSG 466
Query: 411 KSTLINTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPH 464
KSTL N+ + V + T + +PGTT+ L+ I+ AK
Sbjct: 467 KSTLYNSLLNSDYCNYHVRDIVPQATVSELPGTTMNTLKF-PIMNAKTNW---------- 515
Query: 465 LMSMRLNR 472
LM MR +R
Sbjct: 516 LMKMRQDR 523
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
LYDTPGLL + M L +E K++ K++ P +K V V GL RLD + + +
Sbjct: 618 LYDTPGLLCDSQIYMDLLPEELKLISPAKKIVPHCILLKQDYTVFVTGLGRLDYVEGNQD 677
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIR-LQPPIG-QDRASELGTWKDRKLKV-- 569
+ V ++ S + +H+ A+E ++ ++G L P+G + R ++L K R +++
Sbjct: 678 VMLV-IYISSKLPVHIVPRPEAEEFYRCNIGTEVLGLPLGDESRLAKLPPLKGRNIRIRP 736
Query: 570 SGTSWDVNGIDIAAAGLGWFS---LGLKGEASLTLWTY 604
+++ DI + LGW S + E +TL Y
Sbjct: 737 EDQTYNTAAADIQLSSLGWVSVVGMSRSAELDITLRVY 774
>gi|195584491|ref|XP_002082038.1| GD11344 [Drosophila simulans]
gi|194194047|gb|EDX07623.1| GD11344 [Drosophila simulans]
Length = 499
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 335 LVLVGTKVDLLP--SQVSPTRL-DRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLA 389
+ LVG KVDLLP S + + D R K GG LN V L+SA+ G+ L+
Sbjct: 83 VFLVGNKVDLLPRDSNIYLQHIKDSLQREFIKHGGGDGLNIKNVSLISAKTGYGIEELIT 142
Query: 390 FIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK------VSKLTEAPIPGTTLGILR 443
+ + +G+V+++G N GKS+L N + + V K T P PGTTL +LR
Sbjct: 143 QLHKTWAYKGDVYLVGCTNVGKSSLFNILLNSDYCRPEASDLVRKATTCPWPGTTLKLLR 202
Query: 444 IGGILPAKAKLY 455
+ P+ ++Y
Sbjct: 203 FPILRPSSDRVY 214
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 17/184 (9%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQAS-- 511
+YDTPG++ P +S L +E ++ ++PR +R++ ++ +GGL RLDL + +
Sbjct: 292 VYDTPGVMQPDQISPLLTAEELVKLQPATMIRPRAFRLRPQMSILLGGLARLDLLEITSP 351
Query: 512 ---VETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQ--PPIGQDRASELGTWKDRK 566
+ + V V+AS ++ + + E A+ ++K +VG P +D + L W +
Sbjct: 352 RKHFDWLKVFVFASEHLPIMIADTEAAESVYKRYVGSPFLGVPFSSEDLEARLRRWPGLQ 411
Query: 567 LKVSGTSWDVNG--------IDIAAAGLGWFSLGLKG--EASLTLWTYDGIEITLREPLV 616
K G DI + GW L G E L WT I REP +
Sbjct: 412 CKDGDFVLASEGRNEGTRLNCDITLSSAGWMGFLLPGNSECRLRAWTPQAAGIYRREPAL 471
Query: 617 LDRA 620
+ A
Sbjct: 472 IPLA 475
>gi|325296863|ref|NP_001191463.1| nitric oxide synthase-like protein [Aplysia californica]
gi|124357861|gb|ABN05382.1| nitric oxide synthase-like protein [Aplysia californica]
Length = 715
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
+YDTPG+++P + L+ DE + + PR ++ Q + + GL R+D +A V
Sbjct: 505 VYDTPGIINPDQIMNLLSPDECTQLTPSSMIIPRAVVLQPQQTIFISGLARIDYLKADVP 564
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG--IRLQPPIGQDRASELGTWKDRKLKVSG 571
+++TV +S + + +G AD ++ +VG L P + + S+L + R V G
Sbjct: 565 -LFLTVHSSSALPIRIGPTVEADGYYEQYVGSETLLLPMADKQKLSKLPSLAARDFVVKG 623
Query: 572 TSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD--GIEITLREPLVL 617
D+ + +GW S+ K + +TL Y + LR+P +L
Sbjct: 624 RGTLEAAADVQLSSVGWVSVAAKPDIEVTLRAYTPGAKGLHLRQPSLL 671
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 40/211 (18%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDG 305
++C RC+ Y Q N E ++ +I+ ++P+ + +VV+VVD +D G
Sbjct: 215 SICQRCY----YMQHCNAFVEAKTEPEEYTEMISK--IRPTRS----LVVIVVDLMDMQG 264
Query: 306 MFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQV------SPTRLDRWVR 359
S+ L + + K P L++VG K DLL + RL R
Sbjct: 265 --------SIVPNLTDY-----IGHKHP-LLVVGNKADLLAPDCPEYLRNAQERLKEACR 310
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
H G + L+SA+ G+ L++ + + +V+++G N+GKS+L N
Sbjct: 311 H----SGLKNVKAFNLISAKTGFGMEKLISTLFSFYRRKVDVYIVGTANSGKSSLFNILL 366
Query: 420 KKEGVK------VSKLTEAPIPGTTLGILRI 444
+ K + + T + PGTTL +L+
Sbjct: 367 SSDYCKHTARDLIQRATVSEWPGTTLNLLKF 397
>gi|357620128|gb|EHJ72434.1| hypothetical protein KGM_09361 [Danaus plexippus]
Length = 701
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
LYDTPG++ + L +E + RK ++P+TY ++ G +GGL R+DL + S +
Sbjct: 506 LYDTPGVVLSDQILSLLTTEELMLAIPRKLIRPQTYYLREGSTFFIGGLARVDLLE-SED 564
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL-QPPIGQDRASEL--GTWKDRKLKVS 570
T++ S ++ + + + ADE++ + VG L P G D E G + ++
Sbjct: 565 ACRFTIFCSESLPITVTETRFADEVYDSFVGTELFAVPTGGDERLERWPGLRRGGDMEFE 624
Query: 571 GTSWDVNGIDIAAAGLGWFSLGLK--GEASLTLWTYDGIEITLREPLVLDRAPFLE 624
G DV DI + GW ++ K G + WT G + R P +L A L+
Sbjct: 625 GEGPDVCCGDIVLSSAGWAAVTGKAGGRCRVAAWTVGGRGLHRRVPALLPAAVTLK 680
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 32/131 (24%)
Query: 335 LVLVGTKVDLLP---------------SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSAR 379
+++V KVDLLP S++ T+L G + + L+SA+
Sbjct: 300 VIIVANKVDLLPGDSVGYLKRVKECLMSEIQKTKL-----------GEANIKYIALISAK 348
Query: 380 KDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVS------KLTEAP 433
GV +L++ + + +G+V+++G+ N GKS+L N + + KV + T +
Sbjct: 349 TGYGVEDLISAMFKTWLYKGDVFLVGSTNVGKSSLFNALLQSDYCKVHAVDIVKRATVSR 408
Query: 434 IPGTTLGILRI 444
PGTTL +L+
Sbjct: 409 WPGTTLNLLKF 419
>gi|195381701|ref|XP_002049584.1| GJ21673 [Drosophila virilis]
gi|194144381|gb|EDW60777.1| GJ21673 [Drosophila virilis]
Length = 647
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 35/223 (15%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
+ C RCH L +Y N + +P + I +R+ + V++VD +D
Sbjct: 167 QTITCQRCHFLEHY----NIALDVEVPPSAYVETI-SRIQD-----KYALAVIIVDLLDL 216
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP--SQVSPTRLDRWVRHR 361
S++ +++ L K P + LVG KVDLLP S T + ++ +
Sbjct: 217 PS--------SIWPGMQQI-----LGSKRP-VFLVGNKVDLLPRDSNSYLTHVKSCLKQQ 262
Query: 362 -AKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF 418
+ GG LN + L+SA+ G+ L+ + ++ +G+V+++G N GKS+L N
Sbjct: 263 FVQYGGFDALNIKNISLISAKTGYGIEELITQLHKIWQYKGDVYLLGCTNVGKSSLFNIL 322
Query: 419 AKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
+ + V K T PGTTL +L+ + P+ ++Y
Sbjct: 323 LNSDYCRPEASELVRKATTCAWPGTTLQMLKFPILRPSDIRVY 365
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
+YDTPG++ P ++ L +E ++ K L+PR +R+ ++ +GGL R+DL + + E
Sbjct: 443 VYDTPGVMQPDQLTPLLTTEELLRLQPTKMLRPRAFRLAPTMSLLLGGLARVDLLECNQE 502
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQ-PPIGQDRASELGTW-------KDR 565
+ + V+A+ + + + + A+ ++ ++G L P+ + L W KD
Sbjct: 503 YLKLFVFAAETLPILITDTQQAEMVYARYLGTPLLGVPMAGGDETRLQRWPGLQCMEKDI 562
Query: 566 KLKVSGTSWDVNG-----IDIAAAGLGWFSLGL--KGEASLTLWTYDGIEITLREPLVLD 618
++ SG + DI + GW L L E + +WT I +R+P ++
Sbjct: 563 VVQ-SGALLNRQAERQLNCDITLSSAGWLGLLLPENSECTWRVWTPQATGIYVRKPALIP 621
Query: 619 RA 620
+A
Sbjct: 622 QA 623
>gi|90085443|dbj|BAE91462.1| unnamed protein product [Macaca fascicularis]
Length = 631
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 87/168 (51%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 427 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 485
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELG--TWKDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + +D LK
Sbjct: 486 SAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGRERMAGFPPLVAEDIMLKE 545
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + +KG L +T +G +T+R PL+
Sbjct: 546 GRGGSEAVADIKFSSAGWVSVTPNVKGRLHLRGYTPEGTVLTVRPPLL 593
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 42/162 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP Q +P R +R R A+AG AP G
Sbjct: 175 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWDDCARAGLLLAPGHQGPQIPVKNEPQDGEN 232
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 233 SNPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL 292
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P + +
Sbjct: 293 ESDYCTAKGSEAIDRATISPWPGTTLNLLKFSICNPTPYRRF 334
>gi|109074713|ref|XP_001082521.1| PREDICTED: uncharacterized protein C4orf14 isoform 4 [Macaca
mulatta]
gi|355687403|gb|EHH25987.1| hypothetical protein EGK_15861 [Macaca mulatta]
Length = 698
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTWKDRKLKVSG 571
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + + + G
Sbjct: 553 SAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGKERMAGFPPLVAEDIMLKG 612
Query: 572 TSWDVNGI-DIAAAGLGWFSL--GLKGEASLTLWTYDGIEITLREPLV 616
+ DI + GW S+ +K L +T +G +T+R PL+
Sbjct: 613 GRGGSEAVADIKFSSAGWVSVTPNVKDRLHLRGYTPEGTVLTVRPPLL 660
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 42/151 (27%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP Q +P R +R R A+AG AP G
Sbjct: 242 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWDDCARAGLLLAPGHQGPQIPVKNEPQDGEN 299
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 300 SNPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL 359
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRI 444
K + + T +P PGTTL +L+
Sbjct: 360 ESDYCTAKGSEAIDRATISPWPGTTLNLLKF 390
>gi|167973339|ref|ZP_02555616.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|167973843|ref|ZP_02556120.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|168362872|ref|ZP_02696046.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|188024028|ref|ZP_02996786.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|188524341|ref|ZP_03004373.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195867501|ref|ZP_03079504.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198273761|ref|ZP_03206295.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|225550534|ref|ZP_03771483.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
gi|225551498|ref|ZP_03772444.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|171903183|gb|EDT49472.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|184208966|gb|EDU06009.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|188019057|gb|EDU57097.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|188998016|gb|EDU67113.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|195660000|gb|EDX53380.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195660745|gb|EDX53999.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198249516|gb|EDY74298.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|225379313|gb|EEH01678.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 8 str.
ATCC 27618]
gi|225379688|gb|EEH02050.1| GTP-binding domain protein [Ureaplasma urealyticum serovar 2 str.
ATCC 27814]
Length = 361
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 142/356 (39%), Gaps = 54/356 (15%)
Query: 247 VCARCHSLRNYGQVK------NEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
+C RC L +Y +++ N+ +N I + DF + + MV+D
Sbjct: 34 LCQRCFKLIHYNKLEKVHTNLNQNIKNTIDNLDFSNL---------------QIFMVLDI 78
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
+D LE D +L K +++ + K+DLLP + + ++ V
Sbjct: 79 LD----------------LEHTIID-ELKKYQEQIIFLVNKIDLLPHRYNSELVNENVIK 121
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
G VY VS + ++ ++ IK + +G N GKS+LIN
Sbjct: 122 TLVDHGFNNPQIVY-VSTHSNTSLKKVMDCIKNATNKKQKSIFLGKSNVGKSSLINALLA 180
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+K +KLT + TT+ + +I + + ++ D PG+ + + ++ K + I
Sbjct: 181 LNKIK-TKLTISSYTNTTINLNKINLL---EHQIIDAPGVCFNENILNYVRDEDNKSIMI 236
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+ Y++ QA+ + GL+ + Q T T++ S + +H K+EN +
Sbjct: 237 SYGAKAINYQINPQQAIMISGLVGVQYLQGQKTTF--TLYVSSQLDIHRCKLENFITNFN 294
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
N + + QD + D + ++ +I AGLG + E
Sbjct: 295 NRYLLAKFNYVDQDIE-----FIDHTIALNKNQ----KTNICIAGLGLLVINANAE 341
>gi|154341557|ref|XP_001566730.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064055|emb|CAM40246.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 934
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 179/485 (36%), Gaps = 140/485 (28%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
C RCH+L N G V+ PDF D++ A + K VVV+VVD DF G
Sbjct: 380 TCHRCHALENLG-VEGRRKVWSAPDFT-DQLRALKEKK-------CVVVLVVDITDFPG- 429
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ---------------VSP 351
S+ L +S P ++ V K+D + ++ VS
Sbjct: 430 -------SMVYDLP-----GLISMNNPVIIAVN-KMDCIRNRSFNYAGKDRSVAACLVSE 476
Query: 352 TRLDRWVRHRAKAGGAPK--LNGVYLVSARKDLGVRNLLAFIKELAG-----PRGNV--W 402
+ + RWV A G P+ + V VSA++ G+ L++ I++ A P + +
Sbjct: 477 SYVRRWVLDIAVQFGLPQHQIKRVVPVSAKRGWGITPLISAIEDAANLNLRRPHQPLPTY 536
Query: 403 VIGAQNAGKSTLINTFAK------------------------KEGV-------------- 424
+G N GKS++IN A KE V
Sbjct: 537 FVGVANVGKSSVINAMAHALYVPQPPHPASRKVYYTKTDAEGKEAVFWRWYTPPNVNQAE 596
Query: 425 ----------KVSKL-TEAPIPGTTLGI----LRIGG----------------------- 446
K SKL T + +PGTT+ + L IG
Sbjct: 597 MLDIRGRHDKKASKLMTVSSLPGTTVAVNAVRLSIGPTAQTVKQEHQRLSEGAAVLGRAE 656
Query: 447 -ILPAKAKLYDTPGLL-HPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMR 504
+ + +YDTPGLL H H S+ L + + IR P+ + + G + +GGL
Sbjct: 657 ELAKTQTYIYDTPGLLPHWHQRSL-LTLLQMRRTLIRTFRNPQCFLLLPGHTLFLGGLAA 715
Query: 505 LDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDR--------- 555
+D+ + + V+ S V + +D W+ +G L PP ++
Sbjct: 716 VDVVRGPSRGLLFLVYTSQKVRNAIVNTVQSDAFWRAQLGKALDPPGSYEQLLTLDDLSS 775
Query: 556 -ASELGTWKDRK--LKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEIT 610
A G + R + G D+ GLGW S + A + L T G+
Sbjct: 776 AAGPPGLSETRSYLFECYGRHRRRPKADLYVCGLGWTSFCVSEPADVVLRVRTLPGVVHG 835
Query: 611 LREPL 615
+REPL
Sbjct: 836 VREPL 840
>gi|302565204|ref|NP_001180617.1| nitric oxide-associated protein 1 [Macaca mulatta]
Length = 631
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 427 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 485
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTWKDRKLKVSG 571
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + + + G
Sbjct: 486 SAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGKERMAGFPPLVAEDIMLKG 545
Query: 572 TSWDVNGI-DIAAAGLGWFSL--GLKGEASLTLWTYDGIEITLREPLV 616
+ DI + GW S+ +K L +T +G +T+R PL+
Sbjct: 546 GRGGSEAVADIKFSSAGWVSVTPNVKDRLHLRGYTPEGTVLTVRPPLL 593
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 42/151 (27%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP Q +P R +R R A+AG AP G
Sbjct: 175 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWDDCARAGLLLAPGHQGPQIPVKNEPQDGEN 232
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 233 SNPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL 292
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRI 444
K + + T +P PGTTL +L+
Sbjct: 293 ESDYCTAKGSEAIDRATISPWPGTTLNLLKF 323
>gi|432111608|gb|ELK34710.1| hypothetical protein MDA_GLEAN10015808 [Myotis davidii]
Length = 602
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + PRT+ +K G + +G L R+D Q S +
Sbjct: 401 FYDTPGITKENCILKLLTEKEVNIVLPTHSIIPRTFVLKPGTVLFLGALGRIDFLQGS-Q 459
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTWKDRKLKVS- 570
+ + TV AS + +H+ +E AD I++ H G + L+ P+ G++R +E + +
Sbjct: 460 SAWFTVVASNFLPVHITSLEKADTIYQKHAGDLLLKVPMGGKERMAEFPPLVAEDITLEE 519
Query: 571 --GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G V I ++AG + K L +T G +T+R PL+
Sbjct: 520 GLGKPEAVADIKFSSAGWVAVTPQFKDRLHLRGYTPQGTVLTVRPPLL 567
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 39/158 (24%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----------------------------AKA 364
+L+++G KVDLLP Q +P L R +R R AK+
Sbjct: 156 QLIVLGNKVDLLP-QDAPGYLQR-LRERLWDDCVRAGLQRPPSRGGPPGGKENSSPSAKS 213
Query: 365 GGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK---- 420
G L V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT +
Sbjct: 214 GTV--LRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYC 271
Query: 421 --KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
K + + T + PGTTL +L+ P ++++
Sbjct: 272 IAKGAEAIDRATISSWPGTTLNLLKFPICNPTPYRMFE 309
>gi|327279942|ref|XP_003224714.1| PREDICTED: uncharacterized protein C4orf14 homolog [Anolis
carolinensis]
Length = 630
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 5/168 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG++ + LN E K V + PRT+ +K G + +G L R+D Q
Sbjct: 426 FYDTPGIVKDGCVLNLLNEKEVKYVLPTCAIIPRTFFLKPGMTLFLGALGRIDYLQGDSS 485
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQ--PPIGQDRASELGTWKDRKLKVSG 571
+ + +V AS + +H +E AD +++ H G L P G++R + + + + G
Sbjct: 486 S-WFSVVASNLLPVHFTTLEKADALYQKHAGQTLLKIPMGGEERMKDFPPLISQDVTLEG 544
Query: 572 TSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLVL 617
DI + GW ++ + L +T G E+T+R+P +L
Sbjct: 545 IDEAQAVADIKLSTAGWVAVTAHSNNKIHLRCYTPKGTELTIRKPPLL 592
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRW--VRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIK 392
L+++G K DLLP SP L R +A A + V+L+SA+ G+ L+ ++
Sbjct: 206 LLVLGNKADLLPGD-SPDYLRRLRGSLRQACAQAGLRAEEVHLISAKTGFGLEELITRLQ 264
Query: 393 ELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK------VSKLTEAPIPGTTLGILRIGG 446
G+V+++GA N GKSTL N + K + + T +P PGTTL +L+
Sbjct: 265 RSWKFNGDVYLVGATNTGKSTLFNALLHSDYCKSRASQAIHRATISPWPGTTLNLLKFPI 324
Query: 447 ILPAKAKLY 455
I P +++
Sbjct: 325 INPTPYRIF 333
>gi|363733412|ref|XP_420579.3| PREDICTED: uncharacterized protein C4orf14 [Gallus gallus]
Length = 581
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
+DTPG++ + + L E K+V + + PRT+ +K G + + L R+D Q +
Sbjct: 381 FDTPGIVKENCVLNLLTEKEVKLVLPTQAIIPRTFILKPGMVLFLAALGRVDYLQGE-KP 439
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIRL--QPPIGQDRASELGTW--KDRKLKVS 570
+ +V AS + +H+ + +AD +++ + G P G++R E +D LK +
Sbjct: 440 AWFSVVASKLLPVHIAALSSADAMYEKYAGQEFFKVPMGGKERMKEFPPLVPQDITLKGT 499
Query: 571 GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYD--GIEITLREPLVL 617
GT+ V I +++A GW ++ E L L Y G + +REP +L
Sbjct: 500 GTTEAVADIKLSSA--GWVAVTAHAEEELLLRAYTPRGTTVVVREPPLL 546
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 77/144 (53%), Gaps = 16/144 (11%)
Query: 326 AKLSKKLPK--LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAG------GAPKLNGVYLVS 377
A LS ++P L++VG KVDLLP+ SP L R +R R A +L V LVS
Sbjct: 149 ALLSPEVPAAGLLVVGNKVDLLPAD-SPGHLGR-LRQRVTAACLQAGISRAQLVDVRLVS 206
Query: 378 ARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK------VSKLTE 431
A+ G+ L++ ++ G+V+++GA N+GKSTL N + K V++ T
Sbjct: 207 AKTGFGIERLVSRLQRSWKCAGDVYLLGATNSGKSTLFNALLLSDYCKSRAPDVVNRATV 266
Query: 432 APIPGTTLGILRIGGILPAKAKLY 455
+ PGTTL +L+ I P +++
Sbjct: 267 SSWPGTTLNLLKFPIINPTCDRIF 290
>gi|296196477|ref|XP_002745854.1| PREDICTED: nitric oxide-associated protein 1 [Callithrix jacchus]
Length = 696
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
LYDTPG+ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 492 LYDTPGITKENCILNLLTDKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 550
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTWKDRKLKVSG 571
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + + + G
Sbjct: 551 SAWFTVVASNFLPVHITSLDRADALYEKHAGHTLLQVPMGGKERMAGFPPLVAEDITLKG 610
Query: 572 TSWDVNGI-DIAAAGLGWFSL--GLKGEASLTLWTYDGIEITLREPLV 616
+ + DI + GW ++ +K L +T +G +T+R PL+
Sbjct: 611 GLGESEAVADIKFSSAGWVAVTPNVKDRLHLRAYTPEGTILTVRPPLL 658
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 30/152 (19%)
Query: 334 KLVLVGTKVDLLPSQVSPTR---LDRWVRHRAKAGG--APKLNG---------------- 372
+L+++G KVDLLP + R +R A+AG AP G
Sbjct: 242 QLIVLGNKVDLLPQDTTGYRNRLRERLWDDCARAGLLLAPGHRGPQDRENSNPSDWSRTV 301
Query: 373 ---VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT-----FAKKEGV 424
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT + +G
Sbjct: 302 VRDVRLISAKTGYGVEELISALQSSWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKGA 361
Query: 425 K-VSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
+ + + T +P PGTTL +L+ P +++
Sbjct: 362 EAIDRATISPWPGTTLNLLKFPICNPTPYRMF 393
>gi|268532912|ref|XP_002631584.1| Hypothetical protein CBG20762 [Caenorhabditis briggsae]
Length = 871
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 134/319 (42%), Gaps = 62/319 (19%)
Query: 150 IEGFEEDIVDGNFDQSDGKESDSGDGDVFDDWDSDEWEAKFLGEDED--DLDLDGFTPAG 207
+ G EE+ G D D E + G + +D + + G + D L GF P
Sbjct: 287 MAGVEENEQKGFSDNLDEHEPSTLTGTIIEDMPASAKKCSGCGANFHCKDSSLPGFVPL- 345
Query: 208 VGYGNITEELVERSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAEN 267
E++E+ +K S +K +A+ ++C RCH L+ + + N
Sbjct: 346 --------EILEKIDRK--SSYHQKTEAQ---------SLCKRCHLLQEHNFLLNVN--- 383
Query: 268 LIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAK 327
+ D D+ R+++ +P V V S++ KL A+
Sbjct: 384 -VCDVDYGRMMSELKKQPESLVVLVVDV-------------TDLPGSIYPKL------AQ 423
Query: 328 LSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVR--HRA--KAGGAPKLNGVY--LVSARKD 381
+ +++VG KVDLLP + R+ + RA KAG N ++ LVSA+
Sbjct: 424 IVGARRPMIVVGNKVDLLPPDAKTGYMWRFKKTVERAVEKAGLLEHFNILHTALVSAKTG 483
Query: 382 LGVRNL-----LAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK------VSKLT 430
G+ L L + G RG+++++G NAGKST+ N + + K V + T
Sbjct: 484 YGIEELITEIYLKYTNVKLGMRGDIFLVGCTNAGKSTMFNALLQSDLCKVRAVDLVDRAT 543
Query: 431 EAPIPGTTLGILRIGGILP 449
+ PGTT+ +L+ + P
Sbjct: 544 TSIWPGTTISLLKFPVMKP 562
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 13/176 (7%)
Query: 450 AKAK-LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLD 508
AK K YDTPG ++ + + DE V R+ L+PRT VK G+++ +GG+ R+D++
Sbjct: 653 AKGKWCYDTPGTVNENQVLSLFTLDELVNVTPRRVLKPRTCLVKAGESLLIGGVGRIDIE 712
Query: 509 Q-ASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKL 567
A + +T + + + L++ +E ++ +G + Q + + +W +
Sbjct: 713 SIAGYSNVLLTTFTNDQLPLNVMPTHEVEEFYRKWLGTAAL-VVPQGDVTRMASWPGLE- 770
Query: 568 KVSGTSWDVNG------IDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLR-EPLV 616
SG +D+ G DI + +GW + + + +L + IT R +P++
Sbjct: 771 --SGRRFDMKGRRDEGCCDIVLSSIGWVMVTSEKDVALNAFAPANKGITARVQPIL 824
>gi|209554067|ref|YP_002284911.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|209541568|gb|ACI59797.1| ribosome biogenesis GTPase YqeH [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
Length = 361
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 142/356 (39%), Gaps = 54/356 (15%)
Query: 247 VCARCHSLRNYGQVK------NEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDC 300
+C RC L +Y +++ N+ +N I + DF + + MV+D
Sbjct: 34 LCQRCFKLIHYNKLEKVHTNLNKNIKNTIDNLDFSNL---------------QIFMVLDI 78
Query: 301 VDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH 360
+D LE D +L K +++ + K+DLLP + + ++ V
Sbjct: 79 LD----------------LEHTIID-ELKKYQEQIIFLVNKIDLLPHRYNSELVNENVIK 121
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
G VY VS + ++ ++ IK + +G N GKS+LIN
Sbjct: 122 TLVDHGFNNPQIVY-VSTHSNTSLKKVMDCIKNATNKKQKSIFLGKSNVGKSSLINALLA 180
Query: 421 KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEI 480
+K +KLT + TT+ + +I + + ++ D PG+ + + ++ K + I
Sbjct: 181 LNKIK-TKLTISSYTNTTINLNKINLL---EHQIIDAPGVCFNENILNYVRDEDNKSIMI 236
Query: 481 RKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+ Y++ QA+ + GL+ + Q T T++ S + +H K+EN +
Sbjct: 237 SYGAKAINYQINPQQAIMISGLVGVQYLQGQKTTF--TLYVSSQLDIHRCKLENFITNFN 294
Query: 541 NHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
N + + QD + D + ++ +I AGLG + E
Sbjct: 295 NRYLLAKFNYVDQDIE-----FIDHTIALNKNQ----KTNICIAGLGLLVINANAE 341
>gi|68005503|ref|XP_670047.1| DNAJ domain protein [Plasmodium berghei strain ANKA]
gi|56484922|emb|CAI03510.1| DNAJ domain protein, putative [Plasmodium berghei]
Length = 225
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 400 NVWVIGAQNAGKSTLINTFA---------------KKEGVKVSKLTEAPIPGTTL--GIL 442
+++++G N GKS+ +N+F KK GV VS IP TTL +
Sbjct: 9 DIYIVGCVNVGKSSFLNSFLKFINYKHIGDIYNKRKKGGVTVSN-----IPYTTLNYNVF 63
Query: 443 RIGGILPAKAKLYDTPGLLHPHLMSMRLNRD-EQKMVEIRKELQPRTYRVKGGQAVHVGG 501
+ L + DT G+ + S L +D + + I K++QP TY++K ++ +G
Sbjct: 64 K----LKKDINIIDTIGIPTKYQYSSILYKDIDLNSIIINKKIQPFTYKLKDDYSIILGS 119
Query: 502 LMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGT 561
L ++L + + T + S V++H+ + E + + L PP L
Sbjct: 120 LCYINLIYGNFALL--TFYISNKVTIHMCRSEKIENFLEKKKCSFLYPPHVYSDFDLLKP 177
Query: 562 WKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEI 609
+ +KV G ++ DI + L WFS+ +G ++ I+I
Sbjct: 178 FVKHTVKVLGKDYESID-DIVISDLCWFSITGRGIKIFEIYAPKNIKI 224
>gi|291401759|ref|XP_002717113.1| PREDICTED: mitochondrial nitric oxide synthase-like [Oryctolagus
cuniculus]
Length = 671
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + RLD Q E
Sbjct: 471 FYDTPGISKENCILNLLTEKEVNIVLPTQSIIPRTFVLKPGMVLFLGAIGRLDFLQGK-E 529
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTW--KDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R +E +D LK
Sbjct: 530 SAWFTVVASNFLPVHVTYLDRADALYQKHAGHTLLQVPMGGEERMTEFPPLVGEDITLKE 589
Query: 570 SGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
S V I ++AG + L L +T G +T+R PL+
Sbjct: 590 GLGSEAVADIKFSSAGWVAVTPHLHDTLHLRGYTPQGTVLTVRPPLL 636
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 31/154 (20%)
Query: 334 KLVLVGTKVDLLPSQVSPTR-------LDRWVR--------HRAKAGGA----------P 368
+L+++G KVDLLP R D VR HR GA
Sbjct: 226 QLIVLGNKVDLLPQDAPDYRRRLRQRLWDECVRAGLLPAPGHRGPQPGAGGDEEQSASRT 285
Query: 369 KLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT-----FAKKEG 423
+ V LVSA+ GV L++ ++ RG+V+++GA NAGKSTL NT + +G
Sbjct: 286 VVRDVRLVSAKTGYGVEELISALQRAWRYRGDVYLVGATNAGKSTLFNTLLESDYCTAKG 345
Query: 424 VK-VSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
+ + K T +P PGTTL +L+ P ++++
Sbjct: 346 AEAIDKATISPWPGTTLNLLKFPICNPTPYRMFE 379
>gi|255947052|ref|XP_002564293.1| Pc22g02490 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591310|emb|CAP97537.1| Pc22g02490 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 637
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 130/345 (37%), Gaps = 85/345 (24%)
Query: 108 VCPGCGIFMQDKDPNLPGYY----KQ-KKDIERNEEFLEDEEGIENDIEGFEEDIVDGNF 162
CPGCG F Q + N PGYY KQ +K + +E +E E +N+ E D +
Sbjct: 81 CCPGCGAFSQTVEENEPGYYGTSRKQIRKLLAARKEAIEHEIIQQNEAISTEGDKLSAQQ 140
Query: 163 DQSDGKESDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSK 222
D + + F D D E FLG G ITE
Sbjct: 141 DDTVEEAVPPKPIQAFPDEAIDP-ENNFLGPP----------------GRITE------- 176
Query: 223 KKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRL 282
VC RCH L ++ N+ + P +++ R
Sbjct: 177 ------------------------VCDRCHDLIHH----NKAVSSPKPT-----ILSIRN 203
Query: 283 MKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLS--------KKLPK 334
V ++D DF R +L L+E + + S +KLP
Sbjct: 204 YLEESPHRHNRVYHIIDAADFPMSLVPRIHWALM--LQEQRSRNRRSTNEKYERGRKLPS 261
Query: 335 LVLVGTKVDLLPS---QVSPTRLDRWVRHRAKA-----GGAPKLNGVYLVSARKDLGVRN 386
L + T+ DLL + QV +++D ++R +A G +L V+++SA + +
Sbjct: 262 LSFIITRSDLLAATKEQVD-SKMD-YIRTELRAALGRSGREARLGNVHMISAHRGWWTKE 319
Query: 387 LLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTE 431
+ I+E G +WV+G N GKS+ I K+ V K+ E
Sbjct: 320 VKEEIREHGG---GIWVVGKANVGKSSFIEACFPKDSRNVDKIEE 361
>gi|384252820|gb|EIE26295.1| hypothetical protein COCSUDRAFT_26953 [Coccomyxa subellipsoidea
C-169]
Length = 467
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 189/486 (38%), Gaps = 95/486 (19%)
Query: 170 SDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPA-GVGYGNITEELVERSKKKKLSK 228
S S VFD A D ++L TP G YG E +
Sbjct: 30 SQSLRSRVFDS----RCTASTSSPDAVGIELSEHTPRRGSCYGCGAALQTEEAAAPGYVS 85
Query: 229 AERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFD-RVIAT----RLM 283
E+ ++ R ++ G + VC RC L N V VA+ D + D +V+ + R
Sbjct: 86 VEKYEEKRR-HRQLGTL-VCRRCQDLSNGAMVPG-VADVWGRDSEEDLKVLVSPEQLRTQ 142
Query: 284 KPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVD 343
V V++VD +D G F L +D L K P + LVGTKVD
Sbjct: 143 LARVREERAVAVLLVDLLDASGSF-----------LSRVRD---LIGKNP-VFLVGTKVD 187
Query: 344 LLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRG-NVW 402
LLP + + +W+ R+ A +LVS+R G+ + ++ RG +V+
Sbjct: 188 LLPKGTNTEEVAQWL-ERSAAQKRLSPIATFLVSSRTREGIAQVAKAVR--IERRGRDVY 244
Query: 403 VIGAQNAGKSTLINT-------FAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
++G+ N GKS + G+ E+ +PGTTL ++ + A L+
Sbjct: 245 IMGSANVGKSAFVRCAECQIIVLEPAIGIAGHLPVESAMPGTTLQLIAL-NTFEAGGTLF 303
Query: 456 DTPGLLHPHLMSMRLNRDEQKMVEIRKELQP--------RTYRVKGGQAVHV----GGLM 503
DTPG+ H + L K + + +L+P ++ + G + GGL+
Sbjct: 304 DTPGVHLQHRLQHLLEPALTKQLLPKGKLKPFLPPSPQELAFQAQLGTSSPTSYFWGGLV 363
Query: 504 RLDLDQASVET---IY----VTVWASP---NVSLHLGKIENADEIWKNHVGIRLQPPIGQ 553
R+D+ A V T Y + V +SP + S HL +
Sbjct: 364 RIDIVDAPVSTSLAFYGPRTMRVTSSPLLDDSSDHLSAVSAKS----------------- 406
Query: 554 DRASELGTWKDRKLKVSGTSWDVNGIDIAAAGL-GWFSLGLK---GEASLTLWTYDGIEI 609
D L +SG D+A +GL GW ++ + G L +W GIE
Sbjct: 407 ---------ADVTLNLSGAG---PVADVAVSGLPGWVAIRTEQNGGRLVLRVWAPAGIEA 454
Query: 610 TLREPL 615
+R PL
Sbjct: 455 YVRPPL 460
>gi|167522240|ref|XP_001745458.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776416|gb|EDQ90036.1| predicted protein [Monosiga brevicollis MX1]
Length = 469
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 116/285 (40%), Gaps = 60/285 (21%)
Query: 361 RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWV-IGAQNAGKSTLINTFA 419
RA A K +YL S+ KD V + ELA RG V IG NAGKS LIN
Sbjct: 201 RAAANAGLKAPHIYLTSSLKDFRVGPTFRKLAELAQERGQALVFIGCSNAGKSALINAVL 260
Query: 420 KKEGVKVSKLTEAPIPGTTLGILRIGGIL------------PAKAKL------------- 454
+ T +P PGTT + IL A A+L
Sbjct: 261 SGP----QRATVSPTPGTTQALQEYELILDQRVPRLRTVSRVAHAELAVEHLAGTKRPIP 316
Query: 455 -YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
+DTPG L+ + RL + +++ R+ +P +K GQAV GGL L++ S
Sbjct: 317 VFDTPGYLNNAQLFNRLPSRDAALLQQRQYARPFVTMLKPGQAVLFGGLGWLEVLTDSCR 376
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTS 573
+ V+ S + H+ + E +E +++HV + +S
Sbjct: 377 -VRVSTAVSGGIQTHVTRSERYEE-FEHHV------------------------EHFTSS 410
Query: 574 WDVNGIDIAAAGLGWFSLGLK---GEASLTLWTYDGIEITLREPL 615
+ +++A AGLG+ L + AS+ L GI + RE L
Sbjct: 411 REQPCLELAVAGLGFLVLTPERWGAGASIRLTLPPGIHVCQRESL 455
>gi|309808037|ref|ZP_07701956.1| GTP-binding family protein [Lactobacillus iners LactinV 01V1-a]
gi|308168720|gb|EFO70819.1| GTP-binding family protein [Lactobacillus iners LactinV 01V1-a]
Length = 138
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 466 MSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNV 525
M+ RL E ++V +K+L+P TY++ GQ + + GL R+D + T++ + ++
Sbjct: 1 MASRLTGSELELVAPKKQLKPATYQLLPGQTIFLAGLGRIDFIKGPASGF--TIYVARDL 58
Query: 526 SLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAG 585
LH K NADE + H L PP D +LG K + S S DI G
Sbjct: 59 YLHRTKTINADEFYLKHKSDLLNPPCDND---DLGALKGQLYSTSEKS------DILFGG 109
Query: 586 LGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+G+ + + + +T +GI + +R L+
Sbjct: 110 VGFIT--VPSGVVIKAYTPEGIGLGIRRALI 138
>gi|74178704|dbj|BAE34011.1| unnamed protein product [Mus musculus]
Length = 693
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + L E V + PRT+ +K G + +GG+ R+D Q + +
Sbjct: 495 FYDTPGITKESCILNLLTEKEINTVLPTHSIIPRTFVLKPGMVLFLGGIARIDFLQGN-Q 553
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG--IRLQPPIGQDRASELGTWKDRKLKVSG 571
+ + TV AS + +H+ ++ AD +++ H G + L P G++R ++ + + G
Sbjct: 554 SAWFTVVASSFLPVHITSLDKADALYEKHAGHELLLVPMGGKERMAQFPPLVAEDITLKG 613
Query: 572 TSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
DI + GW ++ E +L L T +G +T+ P++
Sbjct: 614 GGKFEAVADIKFSSAGWVAVTPYSEGTLHLRGHTPEGTALTVHPPVL 660
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 67/260 (25%)
Query: 238 AQKEKGEV-TVCARCHSLRNYGQ-VKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVV 295
AQ E G TVC RC L ++G+ ++ +V+ + + +++ L +P +V+
Sbjct: 169 AQAEGGPARTVCQRCWLLVHHGRALRLQVSRD-----QYLELVSAALRRP----GPALVL 219
Query: 296 MVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLD 355
+V+ +D K + K +L+++G KVDLLP Q +P L
Sbjct: 220 YMVNLLDLPDALLPDLPKLVGPK---------------QLIVLGNKVDLLP-QDAPGYLK 263
Query: 356 RWVRH------RAKAGGAPKLNG----------------------------VYLVSARKD 381
R + RA AP G V L+SA+
Sbjct: 264 RLRKRLWDDCIRAGLVVAPGHQGPQYPAGDEPLEEIKNQNPSSRSRTVVKDVRLISAKTG 323
Query: 382 LGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF------AKKEGVKVSKLTEAPIP 435
GV +++ ++ RG+V+++G NAGKSTL NT K + + T +P P
Sbjct: 324 YGVEEMISALQRSWRYRGDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWP 383
Query: 436 GTTLGILRIGGILPAKAKLY 455
GTTL +L+ P +++
Sbjct: 384 GTTLNLLKFPICNPTPYRMF 403
>gi|121700106|ref|XP_001268318.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
gi|119396460|gb|EAW06892.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
Length = 658
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 176/444 (39%), Gaps = 110/444 (24%)
Query: 108 VCPGCGIFMQDKDPNLPGYYKQKKDIERNEEFLEDEEGIENDIEGFEEDIVDGNFDQSDG 167
CPGCG + Q +PN PGYY + + R + L + ++ + +D+ +G +S+
Sbjct: 83 CCPGCGAYAQTVEPNEPGYYGKSRKQTR--KLLSE---LQQAPQEEHKDVEEGLDLRSEA 137
Query: 168 KESDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLS 227
+++ S + D + +AK ED A V E
Sbjct: 138 EKAASTIQKLAIDSELTIPKAKHGAMLED---------AAVTASQYLE------------ 176
Query: 228 KAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSG 287
K K V +C RCH L ++ + + ++ ++ + L+K S
Sbjct: 177 ------------KSKAPVQICDRCHDLVHHNKAVSAISPSIYSIGE--------LLKESP 216
Query: 288 NANAGVVVMVVDCVDF-----DGMFPKRAAKSLFKKLEEAK-DDAKLSKKLPKLVLVGTK 341
+ + + VVD DF D ++ + + + A + + KKLP + L+ T+
Sbjct: 217 HRD-NRIYHVVDAADFPMSLVDNIYEALSIQEPRSRNRRASIEKYRGGKKLPTISLIITR 275
Query: 342 VDLLPS---QVSPTRLDRWVRHRAK-----AGGAPKLNGVYLVSARKDLGVRNLLAFIKE 393
DLL + QV +R++ ++R + + +L V+++SA + + + I++
Sbjct: 276 SDLLAATKEQVD-SRME-YIRTLLRDTLNLSTEQARLGNVHMISAHRGWWTKQVKEEIRK 333
Query: 394 LAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTE---------------------- 431
G +WV+G N GKS+ I K+ + K+ E
Sbjct: 334 HGG---GIWVVGKANVGKSSFIEACFPKDSRNLEKIAELVERRKEESNVPTFKNIALGFN 390
Query: 432 -----AP-------------IPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
AP +PGTT+ +RI K ++ D PGL L + RD
Sbjct: 391 SLLPPAPREDLYPVLPVVSSVPGTTVSPIRI-PFGHGKGEMIDLPGLDRGQLEN--YVRD 447
Query: 474 EQKM-VEIRKELQPRTYRVKGGQA 496
E K + + K +P Y +K GQ+
Sbjct: 448 EHKRDLTMTKRKKPERYTIKPGQS 471
>gi|13543019|gb|AAH05689.1| 2610024G14Rik protein, partial [Mus musculus]
Length = 387
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + L E V + PRT+ +K G + +GG+ R+D Q + +
Sbjct: 189 FYDTPGITKESCILNLLTEKEINTVLPTHSIIPRTFVLKPGMVLFLGGIARIDFLQGN-Q 247
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG--IRLQPPIGQDRASELGTWKDRKLKVSG 571
+ + TV AS + +H+ ++ AD +++ H G + L P G++R ++ + + G
Sbjct: 248 SAWFTVVASNFLPVHITSLDKADALYEKHAGHELLLVPMGGKERMAQFPPLVAEDITLKG 307
Query: 572 TSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
DI + GW ++ E +L L T +G +T+ P++
Sbjct: 308 GGKFEAVADIKFSSAGWVAVTPYSEGTLHLRGHTPEGTALTVHPPVL 354
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 373 VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF------AKKEGVKV 426
V L+SA+ GV +++ ++ RG+V+++G NAGKSTL NT K +
Sbjct: 9 VRLISAKTGYGVEEMISALQRSWRYRGDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAI 68
Query: 427 SKLTEAPIPGTTLGILRIGGILPAKAKLY 455
+ T +P PGTTL +L+ P +++
Sbjct: 69 DRATISPWPGTTLNLLKFPICNPTPYRMF 97
>gi|426344419|ref|XP_004038767.1| PREDICTED: nitric oxide-associated protein 1 [Gorilla gorilla
gorilla]
Length = 346
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 142 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 200
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELG--TWKDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + +D LK
Sbjct: 201 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKE 260
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T +G +T+R PL+
Sbjct: 261 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLL 308
>gi|297673511|ref|XP_002814799.1| PREDICTED: nitric oxide-associated protein 1 [Pongo abelii]
Length = 698
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG++ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 494 FYDTPGIIKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTW--KDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + +D LK
Sbjct: 553 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVPEDIMLKE 612
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T +G +T+R PL+
Sbjct: 613 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLL 660
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 42/162 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP Q +P R +R R A+AG AP G
Sbjct: 242 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWEDCARAGLLLAPGHQGPQRPVKDEPQDGEN 299
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NTF
Sbjct: 300 SNPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTFL 359
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T + PGTTL +L+ P +++
Sbjct: 360 ESDYCTAKGSEAIDRATISSWPGTTLNLLKFPICNPTPYRMF 401
>gi|348571722|ref|XP_003471644.1| PREDICTED: uncharacterized protein C4orf14-like [Cavia porcellus]
Length = 685
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG++ + + L E V + PRT+ +K G + +G + R+D Q + +
Sbjct: 485 FYDTPGIMKENCILNLLTDKEVNNVLPTYSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 543
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELG--TWKDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R +E +D LK
Sbjct: 544 SAWFTVVASNFLPVHITSLDKADAVYQKHAGHALLQVPMGGEERMAEFPPLVAEDITLKE 603
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + L+ L +T +G +T+R PL+
Sbjct: 604 GLGQSEAVADIKFSSAGWVAVTPHLQDRLHLRGYTPEGTVLTVRPPLL 651
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 41/162 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAG--GAPKLNG-------------- 372
+L+++G KVDLLP Q +P L R +R R +AG AP G
Sbjct: 236 QLIVLGNKVDLLP-QDAPGYLRR-LRDRLWDECVRAGLLAAPGHQGPQHTGGDEDAEEDG 293
Query: 373 ------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK 420
V L+SA+ G+ L++ ++ RG+V+++GA N GKSTL NT +
Sbjct: 294 NSLARSRTVVRDVRLISAKTGYGIEELISALQRAWRYRGDVYLVGATNTGKSTLFNTLLQ 353
Query: 421 ------KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
K + + T +P PGTTL +L+ P ++++
Sbjct: 354 SDYCTAKGAEAIDRATISPWPGTTLNLLKFPICNPTPYRMFE 395
>gi|169770195|ref|XP_001819567.1| hypothetical protein AOR_1_654154 [Aspergillus oryzae RIB40]
gi|83767426|dbj|BAE57565.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391867578|gb|EIT76824.1| hypothetical protein Ao3042_07315 [Aspergillus oryzae 3.042]
Length = 658
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 148/380 (38%), Gaps = 83/380 (21%)
Query: 77 NSYGKINKPRK---GSGNTLILSEGRDEDEHYGPVC-PGCGIFMQDKDPNLPGYY-KQKK 131
N+ G IN+P++ SG +L ++ + E PVC PGCG + Q +P PGYY K +K
Sbjct: 46 NANGLINEPQRRLLSSGPSL-SAKSSELTERVLPVCCPGCGAYAQTIEPGEPGYYSKTRK 104
Query: 132 DIERNEEFLEDEEGIENDIEGFEEDIVDGNFDQSDGKESDSGDGDVFDDWDSDEWEAKFL 191
+ E G++ D G+V D
Sbjct: 105 QTRKLLSETERATGVQ-----------------------DGETGEVAD------------ 129
Query: 192 GEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREA----QKEKGEVTV 247
L +G AG I E E + K + A + A A +K + V V
Sbjct: 130 ------LKTEGEKAAGTIQQLIKESEEEAAAPKPIHGALLENAAATAKEYIEKSRPPVQV 183
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RCH L ++ + ++ + I L + N + V+D DF
Sbjct: 184 CDRCHDLVHHNKAVPAISPTIY-------SIGAYLDESPYKYNR--IYHVIDAADF---- 230
Query: 308 PKRAAKSLFKKL--EEAKDDAKLS--------KKLPKLVLVGTKVDLL-PSQVSPTRLDR 356
P ++++ L EE + + + KKLP + + T+ DLL P++
Sbjct: 231 PMSLVDNIYEALSIEEQRSRNRRASTEKYRGGKKLPTISFIITRSDLLAPTKEQVDSKME 290
Query: 357 WVRH-----RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
+VR AK+ +L V+++SA + + + IK G VWV+G N GK
Sbjct: 291 YVRSVLREALAKSTENFRLGNVHMISAHRGWWTKKVKEEIKNHGG---GVWVVGKANVGK 347
Query: 412 STLINTFAKKEGVKVSKLTE 431
S+ I K+ + K+ E
Sbjct: 348 SSFIEACFPKDSKNLEKIAE 367
>gi|9790049|ref|NP_062810.1| nitric oxide-associated protein 1 [Mus musculus]
gi|81906657|sp|Q9JJG9.1|NOA1_MOUSE RecName: Full=Nitric oxide-associated protein 1
gi|7670340|dbj|BAA95022.1| unnamed protein product [Mus musculus]
gi|12857220|dbj|BAB30935.1| unnamed protein product [Mus musculus]
gi|16877845|gb|AAH17154.1| RIKEN cDNA 2610024G14 gene [Mus musculus]
gi|148705986|gb|EDL37933.1| RIKEN cDNA 2610024G14, isoform CRA_a [Mus musculus]
Length = 693
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + L E V + PRT+ +K G + +GG+ R+D Q + +
Sbjct: 495 FYDTPGITKESCILNLLTEKEINTVLPTHSIIPRTFVLKPGMVLFLGGIARIDFLQGN-Q 553
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG--IRLQPPIGQDRASELGTWKDRKLKVSG 571
+ + TV AS + +H+ ++ AD +++ H G + L P G++R ++ + + G
Sbjct: 554 SAWFTVVASNFLPVHITSLDKADALYEKHAGHELLLVPMGGKERMAQFPPLVAEDITLKG 613
Query: 572 TSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
DI + GW ++ E +L L T +G +T+ P++
Sbjct: 614 GGKFEAVADIKFSSAGWVAVTPYSEGTLHLRGHTPEGTALTVHPPVL 660
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 67/260 (25%)
Query: 238 AQKEKGEV-TVCARCHSLRNYGQ-VKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVV 295
AQ E G TVC RC L ++G+ ++ +V+ + + +++ L +P +V+
Sbjct: 169 AQAEGGPARTVCQRCWLLVHHGRALRLQVSRD-----QYLELVSAALRRP----GPALVL 219
Query: 296 MVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLD 355
+V+ +D K + K +L+++G KVDLLP Q +P L
Sbjct: 220 YMVNLLDLPDALLPDLPKLVGPK---------------QLIVLGNKVDLLP-QDAPGYLK 263
Query: 356 RWVRH------RAKAGGAPKLNG----------------------------VYLVSARKD 381
R + RA AP G V L+SA+
Sbjct: 264 RLRKRLWDDCIRAGLVVAPGHQGPQYPAGDEPLEEIKNQNPSSRSRTVVKDVRLISAKTG 323
Query: 382 LGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF------AKKEGVKVSKLTEAPIP 435
GV +++ ++ RG+V+++G NAGKSTL NT K + + T +P P
Sbjct: 324 YGVEEMISALQRSWRYRGDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWP 383
Query: 436 GTTLGILRIGGILPAKAKLY 455
GTTL +L+ P +++
Sbjct: 384 GTTLNLLKFPICNPTPYRMF 403
>gi|26374633|dbj|BAC25338.1| unnamed protein product [Mus musculus]
Length = 633
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + L E V + PRT+ +K G + +GG+ R+D Q + +
Sbjct: 435 FYDTPGITKESCILNLLTEKEINTVLPTHSIIPRTFVLKPGMVLFLGGIARIDFLQGN-Q 493
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG--IRLQPPIGQDRASELGTWKDRKLKVSG 571
+ + TV AS + +H+ ++ AD +++ H G + L P G++R ++ + + G
Sbjct: 494 SAWFTVVASNFLPVHITSLDKADALYEKHAGHELLLVPMGGKERMAQFPPLVAEDITLKG 553
Query: 572 TSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
DI + GW ++ E +L L T +G +T+ P++
Sbjct: 554 GGKFEAVADIKFSSAGWVAVTPYSEGTLHLRGHTPEGTALTVHPPVL 600
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 41/162 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRH------RAKAGGAPKLNG--------------- 372
+L+++G KVDLLP Q +P L R + RA AP G
Sbjct: 183 QLIVLGNKVDLLP-QDAPGYLKRLRKLLWDDCIRAGLVVAPGHQGPQYPAGDEPLEEIKN 241
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV +++ ++ RG+V+++G NAGKSTL NT
Sbjct: 242 HNPSSRSRTVVKDVRLISAKTGYGVEEMISALQRSWRYRGDVYLVGTTNAGKSTLFNTLL 301
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P +++
Sbjct: 302 ESDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 343
>gi|238487416|ref|XP_002374946.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
gi|220699825|gb|EED56164.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
Length = 658
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 148/380 (38%), Gaps = 83/380 (21%)
Query: 77 NSYGKINKPRK---GSGNTLILSEGRDEDEHYGPVC-PGCGIFMQDKDPNLPGYY-KQKK 131
N+ G IN+P++ SG +L ++ + E PVC PGCG + Q +P PGYY K +K
Sbjct: 46 NANGLINEPQRRLLSSGPSL-SAKSSELTERVLPVCCPGCGAYAQTIEPGEPGYYSKTRK 104
Query: 132 DIERNEEFLEDEEGIENDIEGFEEDIVDGNFDQSDGKESDSGDGDVFDDWDSDEWEAKFL 191
+ E G++ D G+V D
Sbjct: 105 QTRKLLSETERATGVQ-----------------------DGETGEVAD------------ 129
Query: 192 GEDEDDLDLDGFTPAGVGYGNITEELVERSKKKKLSKAERKKKAREA----QKEKGEVTV 247
L +G AG I E E + K + A + A A +K + V V
Sbjct: 130 ------LKTEGEKAAGTIQQLIKESEEEAAAPKPIHGALLENAAATAKEYIEKSRPPVQV 183
Query: 248 CARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGMF 307
C RCH L ++ + ++ + I L + N + V+D DF
Sbjct: 184 CDRCHDLVHHNKAVPAISPTIY-------SIGAYLDESPYKYNR--IYHVIDAADF---- 230
Query: 308 PKRAAKSLFKKL--EEAKDDAKLS--------KKLPKLVLVGTKVDLL-PSQVSPTRLDR 356
P ++++ L EE + + + KKLP + + T+ DLL P++
Sbjct: 231 PMSLVDNIYEALSIEEQRSRNRRASTEKYRGGKKLPTISFIITRSDLLAPTKEQVDSKME 290
Query: 357 WVRH-----RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGK 411
+VR AK+ +L V+++SA + + + IK G VWV+G N GK
Sbjct: 291 YVRSVLREALAKSTENFRLGNVHMISAHRGWWTKKVKEEIKNHGG---GVWVVGKANVGK 347
Query: 412 STLINTFAKKEGVKVSKLTE 431
S+ I K+ + K+ E
Sbjct: 348 SSFIEACFPKDSKNLEKIAE 367
>gi|193785926|dbj|BAG54713.1| unnamed protein product [Homo sapiens]
Length = 698
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPGL + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 494 FYDTPGLTKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTW--KDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + +D LK
Sbjct: 553 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKE 612
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T +G +T+R PL+
Sbjct: 613 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLL 660
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 42/162 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP Q +P R +R R A+AG AP G
Sbjct: 242 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWEDCARAGLLLAPGHQGPQRPVKDEPQDGEN 299
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 300 PNPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL 359
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P +++
Sbjct: 360 ESDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 401
>gi|380790571|gb|AFE67161.1| nitric oxide-associated protein 1 [Macaca mulatta]
Length = 698
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELG--TWKDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + +D LK
Sbjct: 553 SAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGKERMAGFPPLVAEDIMLKE 612
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + +K L +T +G +T+R PL+
Sbjct: 613 GRGGSEAVADIKFSSAGWVSVTPNVKDRLHLRGYTPEGTVLTVRPPLL 660
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 42/151 (27%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP Q +P R +R R A+AG AP G
Sbjct: 242 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWDDCARAGLLLAPGHQGPQIPVKNEPQDGEN 299
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 300 SNPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL 359
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRI 444
K + + T +P PGTTL +L+
Sbjct: 360 ESDYCTAKGSEAIDRATISPWPGTTLNLLKF 390
>gi|402869723|ref|XP_003898897.1| PREDICTED: nitric oxide-associated protein 1 [Papio anubis]
Length = 698
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELG--TWKDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + +D LK
Sbjct: 553 SAWFTVVASNTLPVHITSLDRADTLYQKHAGHTLLQVPMGGKERMAGFPPLVAEDIMLKE 612
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + +K L +T +G +T+R PL+
Sbjct: 613 GRGGSEAVADIKFSSAGWVSVTPNVKDRLHLRGYTPEGTVLTVRPPLL 660
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 42/162 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP Q +P R +R R A+AG AP G
Sbjct: 242 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWDDCARAGLLLAPGHQGPQIPVKNEPQDGEN 299
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 300 SNPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL 359
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P +++
Sbjct: 360 ESDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 401
>gi|403284581|ref|XP_003933641.1| PREDICTED: nitric oxide-associated protein 1 [Saimiri boliviensis
boliviensis]
Length = 704
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + R+D + + +
Sbjct: 500 FYDTPGITKENCILNLLTDKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLKGN-Q 558
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTWKDRKLKVSG 571
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + + + + G
Sbjct: 559 SAWFTVVASNFLPVHITSLDRADALYEKHAGHTLLQVPMGGKERMAGFPSLVAEDITLKG 618
Query: 572 TSWDVNGI-DIAAAGLGWFSL--GLKGEASLTLWTYDGIEITLREPLV 616
+ + DI + GW ++ +K L +T +G +T+R PL+
Sbjct: 619 GLGESEAVADIKFSSAGWVAVTPNVKDRLHLRAYTPEGTVLTVRPPLL 666
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 42/162 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP + R + +R R A+AG AP G
Sbjct: 242 QLIVLGNKVDLLPQDAAGYR--QRLRERLWDDCARAGLLLAPGHRGPQPPVKDEPQDREN 299
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT-- 417
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 300 SNPSNWSRTVVRDVRLISAKTGYGVEELISALQSSWRYRGDVYLVGATNAGKSTLFNTLL 359
Query: 418 ---FAKKEGVK-VSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
+ +G + + + T +P PGTTL +L+ P +++
Sbjct: 360 ESDYCTAKGAEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 401
>gi|341899488|gb|EGT55423.1| hypothetical protein CAEBREN_16192 [Caenorhabditis brenneri]
Length = 927
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 40/241 (16%)
Query: 226 LSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKP 285
L K ++K + + E ++C RCH ++ + N + + D D+ R+++ +P
Sbjct: 395 LEKIDKKSNSYHQKSEAPLQSLCKRCHLIQEH----NFLLNMNVCDVDYSRMMSELKKQP 450
Query: 286 SGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLL 345
V V S++ KL A++ +++VG KVDLL
Sbjct: 451 ESLVVLVVDV-------------TDLPGSIYPKL------AQIVGSRRPMIVVGNKVDLL 491
Query: 346 PSQVSPTRLDRWV----RHRAKAGGAPKLNGVY--LVSARKDLGVRNL-----LAFIKEL 394
P + R+ R KAG N ++ LVSA+ G+ L L +
Sbjct: 492 PPDAKTGYMYRFKKTVERAVEKAGLLENFNILHTALVSAKTGYGIEELITEIYLKYTNVK 551
Query: 395 AGPRGNVWVIGAQNAGKSTLINTFAKKEGVKV------SKLTEAPIPGTTLGILRIGGIL 448
G RG+++++G NAGKST+ N + + KV + T + PGTT+ +L+ +
Sbjct: 552 LGMRGDIFLVGCTNAGKSTMFNALLQSDLCKVRAVDLIDRATTSIWPGTTISLLKFPVMK 611
Query: 449 P 449
P
Sbjct: 612 P 612
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQ-ASVE 513
YDTPG ++ + + DE V R+ L+PRT VK G+++ +GG+ R+D++ A
Sbjct: 708 YDTPGTVNENQVLSYFTLDELVNVTPRRVLKPRTCIVKPGESLLIGGVGRIDIESIAGYS 767
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPP--IGQDRASELGTW--------- 562
+ +T +A+ + L+L +E ++ +G +P + Q + + +W
Sbjct: 768 NVLLTTFANEQLPLNLMPTHEVEEFYRRWLG---KPALVVPQGDLNRMASWPGLKGENGE 824
Query: 563 KDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLR-EPLV 616
R+ ++ G D DI + +GW L + + L+ + IT R +P++
Sbjct: 825 NGRRFEMKGRR-DEGCCDIVLSSIGWVMLTSEKDVVLSAFAPANRGITARVQPIL 878
>gi|312084638|ref|XP_003144356.1| hypothetical protein LOAG_08778 [Loa loa]
Length = 637
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 39/224 (17%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC+ L+ + N + + + V +MK ++++VVD D G
Sbjct: 275 LCRRCYMLKKH---------NFLLNVNVCEVDYRSMMKHLKLKQEALIILVVDMCDLPG- 324
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP--SQVSPTRLDRWVRHRA-- 362
S++ +L K+ +++VG KVDLLP ++ R R + H
Sbjct: 325 -------SIYSEL------PKIIGYQKPMIVVGNKVDLLPPDARRGFLRHFRQILHNLLR 371
Query: 363 KAGGAPKLNGVY--LVSARKDLGVRNLLAFIKELAGPR----GNVWVIGAQNAGKSTLIN 416
+ G N ++ L+SA+ GV +L+ I R +++++G NAGKSTL N
Sbjct: 372 ETGFVDNFNILHTSLISAKTGYGVEDLITNIYLRFSTRDTLRNDMYLVGCTNAGKSTLFN 431
Query: 417 TFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKL 454
+ + K V + P PGTT+ +L+ + P+ KL
Sbjct: 432 ALLQSDLCKVRAVDLVERAATTPWPGTTISLLKFPVMNPSPHKL 475
>gi|223997456|ref|XP_002288401.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975509|gb|EED93837.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 149
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 505 LDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPI--GQDRASELGTW 562
+ L + I ++W + ++ LH E +DE HVG L PP+ G +R ++G +
Sbjct: 1 MTLQASGTNYIQSSIWKANDIKLHPTDSEKSDEFTAKHVGTLLTPPLEPGPERMKDIGEF 60
Query: 563 KDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
+ + + G W DI GLGW ++ G A + + G+ +++R PL+
Sbjct: 61 EYHTINIDGDGWKQAAADITLRGLGWVAVTGAGRAQVRVGVPKGVGVSVRPPLM 114
>gi|14150078|ref|NP_115689.1| nitric oxide-associated protein 1 [Homo sapiens]
gi|93204549|sp|Q8NC60.2|NOA1_HUMAN RecName: Full=Nitric oxide-associated protein 1
gi|13436155|gb|AAH04894.1| Chromosome 4 open reading frame 14 [Homo sapiens]
gi|119625923|gb|EAX05518.1| chromosome 4 open reading frame 14 [Homo sapiens]
gi|123981912|gb|ABM82785.1| chromosome 4 open reading frame 14 [synthetic construct]
gi|123996745|gb|ABM85974.1| chromosome 4 open reading frame 14 [synthetic construct]
Length = 698
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTW--KDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + +D LK
Sbjct: 553 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKE 612
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T +G +T+R PL+
Sbjct: 613 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLL 660
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 42/162 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP Q +P R +R R A+AG AP G
Sbjct: 242 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWEDCARAGLLLAPGHQGPQRPVKDEPQDGEN 299
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 300 PNPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL 359
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P +++
Sbjct: 360 ESDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 401
>gi|410249398|gb|JAA12666.1| chromosome 4 open reading frame 14 [Pan troglodytes]
gi|410304802|gb|JAA31001.1| chromosome 4 open reading frame 14 [Pan troglodytes]
gi|410331893|gb|JAA34893.1| chromosome 4 open reading frame 14 [Pan troglodytes]
Length = 698
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTW--KDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + +D LK
Sbjct: 553 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKE 612
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T +G +T+R PL+
Sbjct: 613 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLL 660
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 42/162 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP Q +P R +R R A+AG AP G
Sbjct: 242 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWEDCARAGLLLAPGHQGPQRPVKEEPQDGEN 299
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 300 PNPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL 359
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P +++
Sbjct: 360 ESDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 401
>gi|397469835|ref|XP_003806545.1| PREDICTED: nitric oxide-associated protein 1 [Pan paniscus]
Length = 698
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTW--KDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + +D LK
Sbjct: 553 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKE 612
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T +G +T+R PL+
Sbjct: 613 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLL 660
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 42/162 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP Q +P R +R R A+AG AP G
Sbjct: 242 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWEDCARAGLLLAPGHQGPQRPVKEEPQDGEN 299
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 300 PNPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL 359
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P +++
Sbjct: 360 ESDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 401
>gi|22760732|dbj|BAC11311.1| unnamed protein product [Homo sapiens]
Length = 698
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTW--KDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + +D LK
Sbjct: 553 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKE 612
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T +G +T+R PL+
Sbjct: 613 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLL 660
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 42/162 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP Q +P R +R R A+AG AP G
Sbjct: 242 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWEDCARAGLLLAPGHQGPQRPVKDEPQDGEN 299
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 300 PNPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL 359
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P +++
Sbjct: 360 ESDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 401
>gi|402593995|gb|EJW87922.1| hypothetical protein WUBG_01170 [Wuchereria bancrofti]
Length = 797
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 47/228 (20%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC+ L+ + N + + + V +MK ++++VVD D G
Sbjct: 287 LCRRCYMLKRH---------NFLLNVNVCEVDYHSMMKHLKLKQEALIILVVDMCDLPG- 336
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH-RAKAG 365
S++ +L K+ +++VG KVDLLP P ++RH R
Sbjct: 337 -------SIYSEL------PKIIGYQKPMIVVGNKVDLLP----PDAHSGFLRHFRQVLH 379
Query: 366 GAPKLNG---------VYLVSARKDLGVRNLLAFI----KELAGPRGNVWVIGAQNAGKS 412
G K G + L+SA+ GV +L+ I R +++++G NAGKS
Sbjct: 380 GLLKETGFVDNFNILHMSLISAKTGYGVEDLITNIFLRFSTRDTLRNDMYLVGCTNAGKS 439
Query: 413 TLINTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKL 454
TL N + + K V + P PGTT+ +L+ + P+ KL
Sbjct: 440 TLFNALLQSDLCKVRAVDLVERAATTPWPGTTISLLKFPVMNPSPHKL 487
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 18/185 (9%)
Query: 450 AKAK-LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLD 508
AK K +DTPG ++ + DE + R + PRT+ + +++ + G+ ++D+
Sbjct: 568 AKGKWCFDTPGTVNSDQILNLFTLDELITILPRTLILPRTFIMHSEESLLIAGVAQIDVI 627
Query: 509 QASVE------------TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQ--PPIGQD 554
V+ +I +TV+ S + + + K + ++G L P +
Sbjct: 628 SLPVKSASEKDYPERRPSILLTVFTSEQLPIFIRKTSEISAFREKYLGTSLLVVPAGNAE 687
Query: 555 RASELGTWKDRKLKV-SGTSWDVNGIDIAAAGLGWFSL-GLKGEASLTLWTYDGIEITLR 612
R + K ++ + S SW G D+ + LGW + +GE L +T +G + LR
Sbjct: 688 RIARFPDLKSSEMVLESSGSWKGCG-DVVLSSLGWVCVTSRRGEVRLQAYTPEGRGLFLR 746
Query: 613 EPLVL 617
P +L
Sbjct: 747 TPALL 751
>gi|21758184|dbj|BAC05262.1| unnamed protein product [Homo sapiens]
Length = 623
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 419 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 477
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELG--TWKDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + +D LK
Sbjct: 478 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKE 537
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T +G +T+R PL+
Sbjct: 538 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLL 585
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 42/162 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP Q +P R +R R A+AG AP G
Sbjct: 167 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWEDCARAGLLLAPGHQGPQRPVKDEPQDGEN 224
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 225 PNPPNWSRTVVRDVRLISAKTGCGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL 284
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P +++
Sbjct: 285 ESDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 326
>gi|332819696|ref|XP_001136575.2| PREDICTED: nitric oxide-associated protein 1 isoform 2 [Pan
troglodytes]
Length = 721
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 517 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 575
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTW--KDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + +D LK
Sbjct: 576 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKE 635
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T +G +T+R PL+
Sbjct: 636 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLL 683
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 42/162 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP Q +P R +R R A+AG AP G
Sbjct: 265 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWEDCARAGLLLAPGHQGPQRPVKEEPQDGEN 322
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 323 PNPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL 382
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P +++
Sbjct: 383 ESDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 424
>gi|332238539|ref|XP_003268458.1| PREDICTED: nitric oxide-associated protein 1 [Nomascus leucogenys]
Length = 720
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 516 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 574
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTW--KDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + +D LK
Sbjct: 575 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQVPMGGKERMAGFPPLVAEDIMLKE 634
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T +G +T+R PL+
Sbjct: 635 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLL 682
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 42/162 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP Q +P R +R R A+AG AP G
Sbjct: 264 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWEDCARAGLLLAPGHQGPQRPVKDEPQDGEN 321
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 322 SNPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL 381
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P +++
Sbjct: 382 ESDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 423
>gi|84000349|ref|NP_001033277.1| nitric oxide-associated protein 1 [Bos taurus]
gi|93204548|sp|Q32LB9.1|NOA1_BOVIN RecName: Full=Nitric oxide-associated protein 1
gi|81673530|gb|AAI09655.1| Chromosome 4 open reading frame 14 ortholog [Bos taurus]
Length = 694
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + PRT+ +K G + +G L R+D + + +
Sbjct: 495 FYDTPGITKENCILSLLTEKEVNIVLPTHSIIPRTFMLKPGMVLFLGALGRIDFLKGN-Q 553
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTWKDRKLKVS- 570
+ + TV AS + +H+ ++ AD +++ H G L+ P+ G++R + + +
Sbjct: 554 SAWFTVVASNFLPVHITSLDKADTMYQKHAGHTLLKVPVGGEERMAGFPPLVAEDITLDE 613
Query: 571 --GTSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
G S V I +++A GW ++ + + +LTL +T G +T+R PL+
Sbjct: 614 GLGESEAVADIKLSSA--GWVAVTPQFKDTLTLRGYTPQGTVLTVRRPLL 661
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 41/163 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDR-------------------WVRHRAKAGGAPK----- 369
+L+++G KVDLLP Q +P R + R + +G P+
Sbjct: 242 QLIVLGNKVDLLP-QDTPNYRQRLRERLWDECIGAGLLPPRGYRRAQRSSGDRPRGGEDN 300
Query: 370 ----------LNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
L V L+SA+ GV L++ ++ RG+V+++G+ NAGKSTL NT
Sbjct: 301 ANLPSKSSTVLRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGSTNAGKSTLFNTLL 360
Query: 420 K------KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
+ K + + T +P PGTTL +L+ P +++
Sbjct: 361 ESDYCIAKGAEAIDRATISPWPGTTLNLLKFPICNPTPYRMFQ 403
>gi|344247351|gb|EGW03455.1| Uncharacterized protein C4orf14-like [Cricetulus griseus]
Length = 474
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + PRT+ +K + +G + R+D + +
Sbjct: 276 FYDTPGITKENCILNLLTEKEVDIVLPTHSIVPRTFVLKPRMVLFLGAIARIDFLEGD-Q 334
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIR-LQPPI-GQDRASELG--TWKDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R +E +D LK
Sbjct: 335 SAWFTVVASNFLPVHITSLDKADALYEKHAGHELLQVPMGGKERMAEFPPLVAEDITLKG 394
Query: 570 SGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + KG L +T +G +T++ P++
Sbjct: 395 GGDSEAVADIKFSSAGWVAVTPYSKGTLHLRGYTPEGTVLTVQPPVL 441
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 70/164 (42%), Gaps = 42/164 (25%)
Query: 333 PKLVLV-GTKVDLLPSQVSPTRLDRWVRH------RAKAGGAPKLNG------------- 372
PK V V G KVDLLP Q +P L R + RA AP G
Sbjct: 21 PKQVFVLGNKVDLLP-QDAPGYLQRLRKRLWDDCIRAGLVMAPGHRGPQYPTGDDPRDEK 79
Query: 373 ---------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
V L+SA+ GV L++ ++ RG+V+++G NAGKSTL NT
Sbjct: 80 KNPNPSTRSSTVIKDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGTTNAGKSTLFNT 139
Query: 418 F------AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P +++
Sbjct: 140 LLESDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 183
>gi|242133622|gb|ACS87913.1| conserved hypothetical protein [Leptomonas seymouri]
Length = 1023
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 116/487 (23%), Positives = 179/487 (36%), Gaps = 143/487 (29%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
C RCH+L N G V+ PDF +++ A + K VVV+VVD DF G
Sbjct: 461 TCHRCHALENMG-VEGRRKVWSAPDFT-EQLRALKEKK-------CVVVLVVDITDFPG- 510
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQ---------------VSP 351
S+ L +S P ++ V K+D + ++ V+
Sbjct: 511 -------SMVYNLP-----GLISMNNPVIIAV-NKMDCIRNRSFNYSGKDRGVAACLVTE 557
Query: 352 TRLDRWVRHRAKAGGAP--KLNGVYLVSARKDLGVRNLLAFIKELAG-----PRGNV--W 402
+ + RWV A G P ++ V +SA++ GV +L++ I+E A P + +
Sbjct: 558 SYVRRWVLDIAVQFGLPHHQIKRVVPISAKRGWGVPHLISTIEETANLNLRRPSKPLPTY 617
Query: 403 VIGAQNAGKSTLINT-------------------FAK-----KEGV-------------- 424
+G N GKS++IN F K KE V
Sbjct: 618 FVGVANVGKSSVINAMAHALYVPQPPHPQSKKVYFTKTNKEGKEAVFWRWYTPPNVNQAE 677
Query: 425 ----------KVSKL-TEAPIPGTTLGI--LRIGGILPAKAK------------------ 453
+ SKL T + +PGTT+ + +RI + PA K
Sbjct: 678 MIDIRGRHDKRASKLMTVSSLPGTTVAVNAVRIS-LSPAADKAARLQGPEADTAQAATTD 736
Query: 454 --------LYDTPGLLHPHLMSMR-LNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMR 504
YDTPGLL PH L + + IRK P+ + + G + +GGL
Sbjct: 737 ESAEAQTYFYDTPGLL-PHWHQRSPLTLLQMRRTLIRKFRNPQCFILLPGHTLFLGGLAA 795
Query: 505 LDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPP------IGQDRASE 558
+D+ + + V+ S V + +D W+ +G L PP + D S
Sbjct: 796 IDIVRGPPRGLLFLVYTSQKVRNAIVHTVQSDNFWQEQLGKALDPPGSHEQLLPMDNVSA 855
Query: 559 --------LGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK--GEASLTLWTYDGIE 608
L K + D+ GLGW S + + L + T G+
Sbjct: 856 GGAAAAPGLSETKSYLFECYARHRRRPKADVYICGLGWVSFCVSEPSDVVLRVRTLPGVV 915
Query: 609 ITLREPL 615
+REPL
Sbjct: 916 HGVREPL 922
>gi|324501529|gb|ADY40678.1| Unknown [Ascaris suum]
Length = 809
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 40/224 (17%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC+ L + + N + + D+ ++ +K ++++VVD D
Sbjct: 286 LCRRCYLLEKHNFLLNVN----VCEVDYRSMMCHLKLK-----QEALIILVVDMSDLPA- 335
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA-- 364
S++ L E D K +V+VG KVDLLP L + KA
Sbjct: 336 -------SIYAHLPEIIGDRK------PMVVVGNKVDLLPPDQRSGYLKHFRETLFKAVE 382
Query: 365 --GGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRG-----NVWVIGAQNAGKSTLI 415
G + N V L+SA+ GV L+ I RG +++++G NAGKSTL
Sbjct: 383 DVGFTRRFNVLHVALISAKTGFGVEELITNIHLKWSTRGTAIRNDIYLVGCTNAGKSTLF 442
Query: 416 NTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAK 453
NT + + K V + T + PGTT+ +L+ + P K
Sbjct: 443 NTLLQSDLCKVRAVDLVQRATTSIWPGTTISLLKFPVMNPTPHK 486
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASV-- 512
YDTPG ++ + DE V RK +QPRT+ + G + +G R+DL +
Sbjct: 582 YDTPGTVNEQQVLNLFTLDELIAVVPRKMMQPRTFIMYPGDTLLIGATARVDLVRVGTIR 641
Query: 513 -ETIYVTVWASPNVSLHLGKIENADEIWKNHVG--IRLQPPIGQDRASELGTWKDRKLKV 569
+Y++V+AS + L++ K + ++G + P +R ++ + +++K+
Sbjct: 642 RTPVYMSVFASEQLPLNVMKTNEVESFLSRYLGSAALIAPQGDANRLAQFPQLESQEMKL 701
Query: 570 SGTSWDVNGIDIAAAGLGWFSL-GLKGEASLTLWTYDGIEITLREPLVLDRAPFLER 625
+G + D+ + +GW + G + +L +T + +R P +L PF +
Sbjct: 702 NGRGMEEGAADVILSSIGWVCITGERAMITLRAFTPAAKGLAMRRPPIL---PFCAK 755
>gi|67526495|ref|XP_661309.1| hypothetical protein AN3705.2 [Aspergillus nidulans FGSC A4]
gi|40740723|gb|EAA59913.1| hypothetical protein AN3705.2 [Aspergillus nidulans FGSC A4]
Length = 990
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 147/357 (41%), Gaps = 77/357 (21%)
Query: 239 QKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVV 298
+K + V VC RCH L ++ + + ++ ++ I L + N + ++
Sbjct: 498 EKSQSPVQVCDRCHDLLHHNKGVSAISPSI-------HSIGAYLDESPHKHNR--IYHII 548
Query: 299 DCVDF-----DGMFPKRAAK-SLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLL-PSQVSP 351
D DF DG++ + + + A K KKLP + V T+ DLL P++
Sbjct: 549 DAADFPMSLVDGIYEELGIQEQRSRNRRSATYKYKHGKKLPTITFVITRSDLLGPTKELV 608
Query: 352 TRLDRWVRH--RAKAGGAP---KLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
+VR R K G + +L V+++SA + + + ++E G +W++G
Sbjct: 609 DSKMEFVRSVLREKLGISSEEFRLGNVHMISAHRGWWTKKVKEEMREHGG---GIWIVGK 665
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTE----------AP----------------------- 433
NAGKS+ + K+ + K+ E AP
Sbjct: 666 ANAGKSSFVQACIPKDSRNLEKMAELIARRGEASPAPSLDDQPAFDPDSLLPPAPNEDLY 725
Query: 434 --------IPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
+PGTT+ +RI K ++ D PGL L + ++ ++ + K +
Sbjct: 726 PVLPIVSSLPGTTVSPIRI-PFGRGKGEIIDLPGLSRGDLADYVQDEYKRDLI-MTKRGK 783
Query: 486 PRTYRVKGGQAVHV-GGLMR---LDLDQASVETIYVTVWASPNVSLHLGKIENADEI 538
P + +K GQ++ + GGL+R LDLD + ++ + HL + + A E+
Sbjct: 784 PERHTIKPGQSLLIGGGLIRITPLDLDTIVLAAAFIP------IETHLTRTDKAAEM 834
>gi|323342059|ref|ZP_08082292.1| GTP-binding protein [Erysipelothrix rhusiopathiae ATCC 19414]
gi|336066172|ref|YP_004561030.1| GTP-binding protein YqeH [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|322464484|gb|EFY09677.1| GTP-binding protein [Erysipelothrix rhusiopathiae ATCC 19414]
gi|334296118|dbj|BAK31989.1| GTP-binding protein YqeH [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 340
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKEL 394
+VLV K DLLP VS +L + K ++ V+ VSA K + +L ++++
Sbjct: 93 VVLVVNKRDLLPKSVSNNKLTNAIMRSLKDEDVSLMDIVF-VSALKKNTLESLNPYLED- 150
Query: 395 AGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKL 454
P +G NAGKS+L+N K + VS P+ TT +L I +
Sbjct: 151 -APCA---FVGCVNAGKSSLLNALMGKNDLSVS-----PVASTTADVLHIET---ENYDV 198
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGL 502
YDTPGL + + + + M+ +K L+P Y++ Q + +G L
Sbjct: 199 YDTPGLSNETNLLTKFTDENLVMLAPQKTLKPAVYQLYEKQTIMIGNL 246
>gi|350546553|ref|ZP_08915935.1| ATP/GTP-binding protein [Mycoplasma iowae 695]
gi|349503893|gb|EGZ31454.1| ATP/GTP-binding protein [Mycoplasma iowae 695]
Length = 362
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 126/302 (41%), Gaps = 47/302 (15%)
Query: 248 CARCHSLRNYGQVKNE-VAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
C RC +++Y ++ N+ V E I D VI +K ++++VD D
Sbjct: 37 CKRCFQIKHYKKINNDNVDEKHIID-----VINKIDIKD------NFLIIIVDLFDIYNT 85
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP----SQVSPTRLDRWVRHRA 362
+E+ KD ++V K++ LP S ++ ++ + V +
Sbjct: 86 L-----------IEQYKD-------YRNKIIVVNKLNALPKKFNSNITLEKISKIVDSKN 127
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE 422
+ L + + + + + +IK+ + + +V G N GKS+LIN +
Sbjct: 128 ILYK-----DIILYDSIEHININRIYKYIKDASKNKKITYVFGKTNTGKSSLINALLRLN 182
Query: 423 GVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGL-LHPHLMSMRLNRDEQKMVEIR 481
K LT +P TTL + IL K + DTPG+ H +++ N+D K+
Sbjct: 183 KEK-ELLTVSPYKNTTLN---LSKILIEKNTIIDTPGIPNHDSILNFVSNKDIDKLNN-N 237
Query: 482 KELQPRTYRVK-GGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWK 540
+ + +++K Q + GL L+ ++ E + + N+ +H K + D + K
Sbjct: 238 IKFVSKNFQIKNNNQTYFIEGLCYLNA-KSIYENASINFYVKQNIKVHSTKFDKIDNVLK 296
Query: 541 NH 542
N
Sbjct: 297 NQ 298
>gi|354498862|ref|XP_003511531.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein C4orf14
homolog [Cricetulus griseus]
Length = 691
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + PRT+ +K + +G + R+D + +
Sbjct: 493 FYDTPGITKENCILNLLTEKEVDIVLPTHSIVPRTFVLKPRMVLFLGAIARIDFLEGD-Q 551
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIR-LQPPI-GQDRASELG--TWKDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R +E +D LK
Sbjct: 552 SAWFTVVASNFLPVHITSLDKADALYEKHAGHELLQVPMGGKERMAEFPPLVAEDITLKG 611
Query: 570 SGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + KG L +T +G +T++ P++
Sbjct: 612 GGDSEAVADIKFSSAGWVAVTPYSKGTLHLRGYTPEGTVLTVQPPVL 658
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 70/164 (42%), Gaps = 42/164 (25%)
Query: 333 PKLVLV-GTKVDLLPSQVSPTRLDRWVRH------RAKAGGAPKLNG------------- 372
PK V V G KVDLLP Q +P L R + RA AP G
Sbjct: 238 PKQVFVLGNKVDLLP-QDAPGYLQRLRKRLWDDCIRAGLVMAPGHRGPQYPTGDDPRDEK 296
Query: 373 ---------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT 417
V L+SA+ GV L++ ++ RG+V+++G NAGKSTL NT
Sbjct: 297 KNPNPSTRSSTVIKDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGTTNAGKSTLFNT 356
Query: 418 F------AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P +++
Sbjct: 357 LLESDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 400
>gi|393906591|gb|EJD74330.1| hypothetical protein LOAG_18344 [Loa loa]
Length = 791
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 39/224 (17%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC+ L+ + N + + + V +MK ++++VVD D G
Sbjct: 275 LCRRCYMLKKH---------NFLLNVNVCEVDYRSMMKHLKLKQEALIILVVDMCDLPG- 324
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP--SQVSPTRLDRWVRHRA-- 362
S++ +L K+ +++VG KVDLLP ++ R R + H
Sbjct: 325 -------SIYSEL------PKIIGYQKPMIVVGNKVDLLPPDARRGFLRHFRQILHNLLR 371
Query: 363 KAGGAPKLNGVY--LVSARKDLGVRNLLAFIKELAGPR----GNVWVIGAQNAGKSTLIN 416
+ G N ++ L+SA+ GV +L+ I R +++++G NAGKSTL N
Sbjct: 372 ETGFVDNFNILHTSLISAKTGYGVEDLITNIYLRFSTRDTLRNDMYLVGCTNAGKSTLFN 431
Query: 417 TFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKL 454
+ + K V + P PGTT+ +L+ + P+ KL
Sbjct: 432 ALLQSDLCKVRAVDLVERAATTPWPGTTISLLKFPVMNPSPHKL 475
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 23/192 (11%)
Query: 450 AKAK-LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLD 508
AK K +DTPG ++ + DE V R + PRT+ + +++ V G+ ++D+
Sbjct: 556 AKGKWCFDTPGTVNSDQILNLFTLDELIAVLPRTMILPRTFIMHSDESLLVAGVAQIDVI 615
Query: 509 QASVE--------------TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQ--PPIG 552
+ +TV+AS + + + K ++G L P
Sbjct: 616 SLPMTAKPASDRDYPERRPCALLTVFASEQLPVFIRKTSEIAAFRDKYLGSSLLVVPAGN 675
Query: 553 QDRASELGTWKDRKLKV-SGTSWDVNGIDIAAAGLGWFSL-GLKGEASLTLWTYDGIEIT 610
+R + K ++ + S SW G D+ + LGW + +GE L +T +G +
Sbjct: 676 AERIARFPDLKGNEMVLESPGSWKGCG-DVVLSSLGWVCVTSRRGEVRLQAYTPEGRGLF 734
Query: 611 LREPLVLDRAPF 622
LR+P +L PF
Sbjct: 735 LRKPALL---PF 743
>gi|170576186|ref|XP_001893531.1| RE23670p [Brugia malayi]
gi|158600406|gb|EDP37634.1| RE23670p, putative [Brugia malayi]
Length = 931
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 39/224 (17%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC+ L+ + N + + + V +MK ++++VVD D G
Sbjct: 421 LCRRCYMLKRH---------NFLLNVNVCEVDYHSMMKHLKLKQEALIILVVDMCDLPG- 470
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLP--SQVSPTRLDRWVRH--RA 362
S++ +L + K +++VG KVDLLP + R R V H
Sbjct: 471 -------SIYSELPKIIGYQK------PMIVVGNKVDLLPPDAHRGFLRHFRQVLHGLLK 517
Query: 363 KAGGAPKLNGVY--LVSARKDLGVRNLLAFI----KELAGPRGNVWVIGAQNAGKSTLIN 416
+ G N ++ L+SA+ GV +L+ I R +++++G NAGKSTL N
Sbjct: 518 ETGFVDNFNILHMSLISAKTGYGVEDLITNIFLRFSTRDTLRNDMYLVGCTNAGKSTLFN 577
Query: 417 TFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAKL 454
+ + K V + P PGTT+ +L+ + P+ KL
Sbjct: 578 ALLQSDLCKVRAVDLVERAATTPWPGTTISLLKFPVMNPSPHKL 621
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 18/185 (9%)
Query: 450 AKAK-LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLD 508
AK K +DTPG ++ + + DE + R + PRT+ + +++ + G+ ++D+
Sbjct: 702 AKGKWCFDTPGTVNSNQILNLFTLDELITILPRTLILPRTFIMHSEESLLIAGVAQIDVI 761
Query: 509 QASVE------------TIYVTVWASPNVSLHLGKIENADEIWKNHVG--IRLQPPIGQD 554
V+ +I +TV+AS + + + K + + ++G + + P +
Sbjct: 762 SLPVKSTSEKDYPERRPSILMTVFASEQLPVFIRKTSESSAFREKYLGSSLLVVPAGNAE 821
Query: 555 RASELGTWKDRKLKV-SGTSWDVNGIDIAAAGLGWFSL-GLKGEASLTLWTYDGIEITLR 612
R + K ++ + S SW G D+ + LGW + +GE L +T +G + LR
Sbjct: 822 RIARFPDLKSSEMVLESSGSWKGCG-DVVLSSLGWVCVTSRRGEVRLQAYTPEGRGLFLR 880
Query: 613 EPLVL 617
P +L
Sbjct: 881 TPALL 885
>gi|324501468|gb|ADY40655.1| Unknown [Ascaris suum]
Length = 802
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASV-- 512
YDTPG ++ + DE V RK +QPRT+ + G + +G R+DL +
Sbjct: 575 YDTPGTVNEQQVLNLFTLDELIAVVPRKMMQPRTFIMYPGDTLLIGATARVDLVRVGTIR 634
Query: 513 -ETIYVTVWASPNVSLHLGKIENADEIWKNHVG--IRLQPPIGQDRASELGTWKDRKLKV 569
+Y++V+AS + L++ K + ++G + P +R ++ + +++K+
Sbjct: 635 RTPVYMSVFASEQLPLNVMKTNEVESFLSRYLGSAALIAPQGDANRLAQFPQLESQEMKL 694
Query: 570 SGTSWDVNGIDIAAAGLGWFSL-GLKGEASLTLWTYDGIEITLREPLVLDRAPFLER 625
+G + D+ + +GW + G + +L +T + +R P +L PF +
Sbjct: 695 NGRGMEEGAADVILSSIGWVCITGERAMITLRAFTPAAKGLAMRRPPIL---PFCAK 748
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 40/224 (17%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC+ L + + N + + D+ ++ +K ++++VVD D
Sbjct: 279 LCRRCYLLEKHNFLLNVN----VCEVDYRSMMCHLKLK-----QEALIILVVDMSDLPA- 328
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA-- 364
S++ L E D K +V+VG KVDLLP L + KA
Sbjct: 329 -------SIYAHLPEIIGDRK------PMVVVGNKVDLLPPDQRSGYLKHFRETLFKAVE 375
Query: 365 --GGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRG-----NVWVIGAQNAGKSTLI 415
G + N V L+SA+ GV L+ I RG +++++G NAGKSTL
Sbjct: 376 DVGFTRRFNVLHVALISAKTGFGVEELITNIHLKWSTRGTAIRNDIYLVGCTNAGKSTLF 435
Query: 416 NTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAK 453
NT + + K V + T + PGTT+ +L+ + P K
Sbjct: 436 NTLLQSDLCKVRAVDLVQRATTSIWPGTTISLLKFPVMNPTPHK 479
>gi|296486559|tpg|DAA28672.1| TPA: hypothetical protein LOC539773 [Bos taurus]
gi|440903359|gb|ELR54030.1| hypothetical protein M91_21392 [Bos grunniens mutus]
Length = 694
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 10/170 (5%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + PRT+ +K G + +G L R+D + + +
Sbjct: 495 FYDTPGITKENCILSLLTEKEVNIVLPTHSIIPRTFMLKPGMVLFLGALGRIDFLKGN-Q 553
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTWKDRKLKVS- 570
+ + TV AS + +H+ ++ AD +++ H G L+ P+ G++R + + +
Sbjct: 554 SAWFTVVASNFLPVHITSLDKADTMYQKHAGHTLLKVPVGGEERMAGFPPLVAEDITLDE 613
Query: 571 --GTSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
G S V I ++A GW ++ + + +LTL +T G +T+R PL+
Sbjct: 614 GLGESEAVADIKFSSA--GWVAVTPQFKDTLTLRGYTPQGTVLTVRRPLL 661
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 41/163 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDR-------------------WVRHRAKAGGAPK----- 369
+L+++G KVDLLP Q +P R + R + +G P+
Sbjct: 242 QLIVLGNKVDLLP-QDTPNYRQRLRERLWDECIGAGLLPPRGYRRAQRSSGDRPRGGEDN 300
Query: 370 ----------LNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
L V L+SA+ GV L++ ++ RG+V+++G+ NAGKSTL NT
Sbjct: 301 ANLPSKSSTVLRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGSTNAGKSTLFNTLL 360
Query: 420 K------KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
+ K + + T +P PGTTL +L+ P +++
Sbjct: 361 ESDYCIAKGAEAIDRATISPWPGTTLNLLKFPICNPTPYRMFQ 403
>gi|224049407|ref|XP_002192151.1| PREDICTED: nitric oxide-associated protein 1 [Taeniopygia guttata]
Length = 457
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 455 YDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVET 514
+DTPG++ + L E K+V + PRT+ +K G + + L R+D S
Sbjct: 258 FDTPGIVKEDCVLNLLTEKEVKLVLPSHAIVPRTFILKPGMVLFLAALGRIDYLGNS--P 315
Query: 515 IYVTVWASPNVSLHLGKIENADEIWKNHVGIR-LQPPI-GQDRASELGTW--KDRKLKVS 570
+ +V AS + +H+ + NAD +++ H L+ P+ G++R E +D LK
Sbjct: 316 AWFSVLASNLLPVHVTTLGNADTVYEKHAAQEFLKVPMGGEERMKEFPPLVPQDITLKGI 375
Query: 571 GTSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLVL 617
GT+ V I +++A GW ++ E L L +T G + +REP +L
Sbjct: 376 GTTEAVADIKLSSA--GWVAVTAHAEEELLLRAYTPKGTALVVREPPLL 422
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNG-----VYLVSARKDLGVRNLLA 389
+++VG KVD+LP+ L R + A A L G + LVSA+ G+ L++
Sbjct: 32 VLVVGNKVDVLPADRR-GHLGRLRQRVAAACARAGLRGAALVDIRLVSAKTGYGLEGLVS 90
Query: 390 FIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK------VSKLTEAPIPGTTLGILR 443
++ G+V+++GA N+GKSTL NT + + K + + T +P PGTTL +L+
Sbjct: 91 RLQRSWKCAGDVYLLGATNSGKSTLFNTLLRSDYCKSRAPDIIDRATVSPWPGTTLNLLK 150
Query: 444 IGGILPAKAKLY 455
I P +++
Sbjct: 151 FPIINPTCDRIF 162
>gi|345565063|gb|EGX48019.1| hypothetical protein AOL_s00081g346 [Arthrobotrys oligospora ATCC
24927]
Length = 866
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 132/571 (23%), Positives = 203/571 (35%), Gaps = 111/571 (19%)
Query: 108 VCPGCGIFMQDKDPNLPGYYKQKKDIERNEEFLEDEEGIENDIEGFEEDIVDGNFDQ--S 165
CPGCG D + PG+Y + ++ + + + + E I Q
Sbjct: 209 TCPGCGAKSHSGDFHEPGFYGPEANMPTPKFPWDPKSPFHASPKQNLETIYKAALSQISE 268
Query: 166 DGKE--SDSGDGDVFDDWDSDEWEAKF-------LGEDEDDLDLDGFTPAGVGYGNITEE 216
+ KE +S D+ D + K L +DE+ LD F P Y N+
Sbjct: 269 EVKEILRESNMKPPVDEEDEPKIHKKIDRRHPNNLVKDEEVLD--DFIP----YENLPSP 322
Query: 217 LVERSKK--KKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDF 274
S+ + L + ++K E ++ +C RC SL +Y +N + PD F
Sbjct: 323 QSAESESWFEALVPEDPERKELEIRRRARHTILCNRCRSLLHY---QNTTVQG--PDATF 377
Query: 275 DRVIATRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPK 334
+ P + V V+D DF A K++ L KD KK
Sbjct: 378 TQAAEVIAKSPFKRIH---VYHVIDAADFPMSVLPNARKAILAGLNNLKDG---KKKDVS 431
Query: 335 LVLVGTKVDLL-PSQVSPTRLDRWVR-----HRAKAGGAPKLNGVYLVSARKDLGVRNLL 388
L V T+ DLL P++ T L ++R + A L + +VSA+ L
Sbjct: 432 LSFVITRADLLMPTEQKVTSLMTYIRRVLNNYLDDADKEKTLKDLRIVSAKNGWTTERLK 491
Query: 389 AFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVK----------------------- 425
E+ G +G V +G N GKS L K G K
Sbjct: 492 ---DEIRGRKGGVVFLGKTNVGKSRLYEAVFPKRGKKDLAVKKGFGRGDLEEQADFLEDD 548
Query: 426 ---------VSKLTEAP----IPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
K E P +PGTT+G + I + +L D PG LM L +
Sbjct: 549 FDFYIQNGRRVKHPEMPLASKVPGTTVGPIAI-DFAAGRGQLIDLPGFSRGGLMKY-LKQ 606
Query: 473 DEQKMVEIRKELQPRTYRVKGGQAVHVGGLMR---LDLDQASVETIYVTVWASPNVSLHL 529
D K + + P Y V + +GGL+ L ++ T+ V V++ NV H+
Sbjct: 607 DYVKQTVMVDRVNPERYIVPPEKTFLLGGLVTVRPLQPEKGRPVTLEVAVFS--NVPGHV 664
Query: 530 GKIENA---------------DEIWKNHVGI---------RLQPPIGQDRASEL--GTWK 563
K E D +W + +L + + R+ L G +
Sbjct: 665 AKEEKVEGFLNPESDSTSPKRDFLWARKAAVESFKSAGTFKLTDDVTKRRSGPLVEGMGE 724
Query: 564 DRKLKVSGTSWDVNGIDIAAAGLGWFSLGLK 594
D KV S+ V DI G GW + +
Sbjct: 725 DHFKKV---SFRVYATDIVVEGFGWLEISAQ 752
>gi|324501284|gb|ADY40574.1| Unknown [Ascaris suum]
Length = 380
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 93/224 (41%), Gaps = 40/224 (17%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC+ L + N + + + V +M ++++VVD D
Sbjct: 78 LCRRCYLLEKH---------NFLLNVNVCEVDYRSMMCHLKLKQEALIILVVDMSDLPA- 127
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA-- 364
S++ L E D K +V+VG KVDLLP L + KA
Sbjct: 128 -------SIYAHLPEIIGDRK------PMVVVGNKVDLLPPDQRSGYLKHFRETLFKAVE 174
Query: 365 --GGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRG-----NVWVIGAQNAGKSTLI 415
G + N V L+SA+ GV L+ I RG +++++G NAGKSTL
Sbjct: 175 DVGFTRRFNVLHVALISAKTGFGVEELITNIHLKWSTRGTAIRNDIYLVGCTNAGKSTLF 234
Query: 416 NTFAKKEGVK------VSKLTEAPIPGTTLGILRIGGILPAKAK 453
NT + + K V + T + PGTT+ +L+ + P K
Sbjct: 235 NTLLQSDLCKVRAVDLVQRATTSIWPGTTISLLKFPVMNPTPHK 278
>gi|424844826|ref|ZP_18269437.1| putative GTPase [Jonquetella anthropi DSM 22815]
gi|363986264|gb|EHM13094.1| putative GTPase [Jonquetella anthropi DSM 22815]
Length = 370
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 157/385 (40%), Gaps = 68/385 (17%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPS---GNANAGVVVMVVDCVD 302
TVC RC LR+YG+ +L L++P A+A V +V D +
Sbjct: 34 TVCRRCFRLRHYGEGNKAPVNDL-------------LLEPQIRAAAASAAAVFLVCDALS 80
Query: 303 FDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA 362
D RA F+ L+ P +LV TK DL+ + + L WV +
Sbjct: 81 AD-----RALDG-FEWLDGVS--------CPVTLLV-TKADLVEPYLDRSALGLWV---S 122
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE 422
+A G P + ++S K+ +RN ++++ + +G NAGKST++++ +
Sbjct: 123 EATGVP-FEQIQVLSGLKNSDLRNFRLRLQDVFSSGDRLLFLGKTNAGKSTILSSMLRGG 181
Query: 423 GVKVSKLTEAPIPGTTLGILRI---GGILPAKAKLYDTPGL-----LHPHLMSMRLNRDE 474
S T + +PGTT+G+ GGI+ L D PGL L P L L
Sbjct: 182 ----SGPTVSAMPGTTVGLCEYQLEGGIV-----LLDAPGLKSHDSLLPALCPQCLMALT 232
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASP-NVSLHLGKIE 533
K + +EL +K G A+ GGL R + V +P V++H E
Sbjct: 233 PKRRLVCQELT-----LKEGSALCFGGLGRAAVVDGGERGWLRAVAVAPEGVTIHQTSAE 287
Query: 534 NADEIWKNHVGIRLQPPI--GQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
A+E+ L PP D S L +D G+D+ G+GW ++
Sbjct: 288 KAEELIAAARTDLLSPPCRTCYDTLSRLPVRRDEFALYP-------GLDLVVGGVGWLAV 340
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
G + L D + LR+ L+
Sbjct: 341 -TSGHGRIRLSGPDPLHGFLRKQLI 364
>gi|73975317|ref|XP_854207.1| PREDICTED: uncharacterized protein C4orf14 [Canis lupus familiaris]
Length = 700
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 41/163 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDR-----W----------------VRHRAKAG---GA-- 367
+L+++G KVDLLP Q +P L R W RH + G GA
Sbjct: 238 QLIVLGNKVDLLP-QDAPGHLQRLRERLWDDCTRAGLLRPPGRRGPRHAGEDGQRDGAEN 296
Query: 368 --------PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
P L V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 297 SNSAARARPVLRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL 356
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
K + + T +P PGTTL +L+ P ++++
Sbjct: 357 GSDYCIAKGAEAIDRATISPWPGTTLNLLKFPICNPTPYRMFE 399
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
+DTPG+ + + L E +V + PRT+ +K G + +G + R+D Q + +
Sbjct: 491 FHDTPGITKENCILNLLTEKEVNIVLPTCSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 549
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQ--PPIGQDRASELGTW--KDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G L P G++R + +D LK
Sbjct: 550 SAWFTVVASNLLPVHITSLDRADTVYQKHAGHTLLKIPMGGEERMAGFPPLVGEDITLKE 609
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T G +T+R PL+
Sbjct: 610 GLGESKAVADIKFSSAGWVAVTPQFKDRLHLRGYTPQGTVLTVRPPLL 657
>gi|260654966|ref|ZP_05860454.1| conserved hypothetical protein [Jonquetella anthropi E3_33 E1]
gi|260630281|gb|EEX48475.1| conserved hypothetical protein [Jonquetella anthropi E3_33 E1]
Length = 374
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 157/385 (40%), Gaps = 68/385 (17%)
Query: 246 TVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPS---GNANAGVVVMVVDCVD 302
TVC RC LR+YG+ +L L++P A+A V +V D +
Sbjct: 38 TVCRRCFRLRHYGEGNKAPVNDL-------------LLEPQIRAAAASAAAVFLVCDALS 84
Query: 303 FDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRA 362
D RA F+ L+ P +LV TK DL+ + + L WV +
Sbjct: 85 AD-----RALDG-FEWLDGVS--------CPVTLLV-TKADLVEPYLDRSALGLWV---S 126
Query: 363 KAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKE 422
+A G P + ++S K+ +RN ++++ + +G NAGKST++++ +
Sbjct: 127 EATGVP-FEQIQVLSGLKNSDLRNFRLRLQDVFSSGDRLLFLGKTNAGKSTILSSMLRGG 185
Query: 423 GVKVSKLTEAPIPGTTLGILRI---GGILPAKAKLYDTPGL-----LHPHLMSMRLNRDE 474
S T + +PGTT+G+ GGI+ L D PGL L P L L
Sbjct: 186 ----SGPTVSAMPGTTVGLCEYQLEGGIV-----LLDAPGLKSHDSLLPALCPQCLMALT 236
Query: 475 QKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASP-NVSLHLGKIE 533
K + +EL +K G A+ GGL R + V +P V++H E
Sbjct: 237 PKRRLVCQELT-----LKEGSALCFGGLGRAAVVDGGERGWLRAVAVAPEGVTIHQTSAE 291
Query: 534 NADEIWKNHVGIRLQPPI--GQDRASELGTWKDRKLKVSGTSWDVNGIDIAAAGLGWFSL 591
A+E+ L PP D S L +D G+D+ G+GW ++
Sbjct: 292 KAEELVAAARTDLLSPPCRTCYDTLSRLPVRRDEFALYP-------GLDLVVGGVGWLAV 344
Query: 592 GLKGEASLTLWTYDGIEITLREPLV 616
G + L D + LR+ L+
Sbjct: 345 -TSGHGRIRLSGPDPLHGFLRKQLI 368
>gi|412985917|emb|CCO17117.1| predicted protein [Bathycoccus prasinos]
Length = 565
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 107/469 (22%), Positives = 184/469 (39%), Gaps = 110/469 (23%)
Query: 230 ERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSG-- 287
E KKK ++ ++ +C RC +L N GQ+ N V + I T L+ P
Sbjct: 122 ETKKKNKQL-----DLLLCLRCSNLSN-GQMINAVVGQ------GGQKIETGLITPEELR 169
Query: 288 ------NANAGVVVMVVDCVDFDGMF-PK--------------RAAKSLFKKLEEAKDDA 326
+VV +VD DF G F PK + K +++
Sbjct: 170 ETLKDIRGKKALVVKIVDLTDFHGSFLPKIRDLVGSNPILLVVTKCDVIGKGFAMENNES 229
Query: 327 KLSKKL-----PKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKD 381
+ + KL L G + + + +R + V + A G + G L R
Sbjct: 230 LIEYVIEECAKKKLTLAGDPIFVAARKPGSSRSNSSVGNDTTAPGTRGIRGEDLNGMRA- 288
Query: 382 LGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKL--------TEAP 433
+L I+E G +V+V+G+ N GKST + F K ++ T +
Sbjct: 289 ----AVLTTIRERRGR--DVYVVGSANVGKSTFVREFTKVLRTEMGNYFAPSKRLPTASS 342
Query: 434 IPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKG 493
+PGTTLG++ I K LYDTPG+ H ++ LN ++ K +++ +L + YR
Sbjct: 343 MPGTTLGVIPIKA-FEDKKSLYDTPGVFLHHRVNSLLNGEQMKSLKLGGDL--KVYRAPV 399
Query: 494 GQ-----------------------AVHVGGLMRLDLDQA----SVETIYVTVWASPNVS 526
Q + GL+RLD+ A + T+ V+ + +
Sbjct: 400 SQQDGSSSTSNVNSSNNNSEKLKNVSFDWNGLVRLDILDAPETDDLNTVNVSFYGPKKMR 459
Query: 527 LHLGKIENADEIWKNHVG------IRLQPPIGQDRASELGTWKDRKLKVSGTSWDVNGID 580
+ +I D++ K+ G P + S R++++S D G D
Sbjct: 460 IFKSRI---DDMQKHADGGDKTCLFDESAPTREFYQSLPSLRVSREVEISLD--DYKGKD 514
Query: 581 IAAAGL-GWF-------------SLGLKGEASLTLWTYDGIEITLREPL 615
++ +GL GW S G KG ++ +W+ G+E+ +R+ +
Sbjct: 515 LSISGLGGWIRVVRERNHTKYTNSPGAKGSITVRVWSLPGVEVFVRDVM 563
>gi|355737025|gb|AES12187.1| hypothetical protein [Mustela putorius furo]
Length = 445
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
+DTPG++ + + L E V + PRT+ +K G + +G + R+D Q + +
Sbjct: 247 FHDTPGIIKENCILNLLTEKEVNTVLPTHSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 305
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL--QPPIGQDRASELGTW--KDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G L P G++R +E +D LK
Sbjct: 306 SAWFTVVASNLLPVHITSLDRADTVYQKHAGHTLLKVPMGGEERMAEFPPLVGEDIILKE 365
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + LK L +T G +T+R PL+
Sbjct: 366 GLGESKAVADIKFSSAGWVAVTAQLKDRLHLRGYTPQGTVLTVRPPLL 413
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 370 LNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK------KEG 423
L V L+SA+ GV L+ ++ RG+V+++GA NAGKSTL NT + K
Sbjct: 55 LRDVRLISAKTGYGVEELITALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCIAKGA 114
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
+ + T +P PGTTL +L+ P ++++
Sbjct: 115 EAIDRATISPWPGTTLNLLKFPICNPTPYRMFE 147
>gi|395851373|ref|XP_003798235.1| PREDICTED: nitric oxide-associated protein 1 [Otolemur garnettii]
Length = 688
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L +E K+V + PRT+ +K G + +G L R+D Q + +
Sbjct: 488 FYDTPGITKENCILNLLTEEEVKIVLPTHSIVPRTFVLKPGMVLFLGALGRIDFLQGN-Q 546
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTWKDRKLKVS- 570
+ + TV AS + +H+ ++ AD +++ G LQ P+ G++R + + + +
Sbjct: 547 SAWFTVVASNLLPVHITSLDKADGVYEKQAGHTLLQVPMGGKERMAGFPSLVAEDIMLQE 606
Query: 571 --GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + +K L +T G +T+R PL+
Sbjct: 607 GLGESEAVADIKFSSAGWVAVTPQMKDRLHLRGYTPRGTVLTVRPPLL 654
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 43/164 (26%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAG-------GAPKLNG--------- 372
+L+++G K+DLLP Q +P R +R R A+AG G P+L
Sbjct: 235 QLIVLGNKLDLLP-QDAPGYRQR-LRERLWNDCARAGLLLAPGHGGPQLPSRDGPQDREE 292
Query: 373 --------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF 418
V L+SA+ G+ L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 293 NSNRSDRSRTVVRDVRLISAKTGYGIEELISALQRSWRYRGDVYLVGATNAGKSTLFNTL 352
Query: 419 AK------KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
K K + + T + PGTTL +L+ P ++++
Sbjct: 353 LKSDYCTAKGAEAIDRATISSWPGTTLNLLKFPICNPTPYRMFE 396
>gi|259481754|tpe|CBF75572.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 634
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 147/357 (41%), Gaps = 77/357 (21%)
Query: 239 QKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVV 298
+K + V VC RCH L ++ + + ++ ++ I L + N + ++
Sbjct: 142 EKSQSPVQVCDRCHDLLHHNKGVSAISPSI-------HSIGAYLDESPHKHNR--IYHII 192
Query: 299 DCVDF-----DGMFPKRAAK-SLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLL-PSQVSP 351
D DF DG++ + + + A K KKLP + V T+ DLL P++
Sbjct: 193 DAADFPMSLVDGIYEELGIQEQRSRNRRSATYKYKHGKKLPTITFVITRSDLLGPTKELV 252
Query: 352 TRLDRWVRH--RAKAGGAP---KLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
+VR R K G + +L V+++SA + + + ++E G +W++G
Sbjct: 253 DSKMEFVRSVLREKLGISSEEFRLGNVHMISAHRGWWTKKVKEEMREHGG---GIWIVGK 309
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTE----------AP----------------------- 433
NAGKS+ + K+ + K+ E AP
Sbjct: 310 ANAGKSSFVQACIPKDSRNLEKMAELIARRGEASPAPSLDDQPAFDPDSLLPPAPNEDLY 369
Query: 434 --------IPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQ 485
+PGTT+ +RI K ++ D PGL L + ++ ++ + K +
Sbjct: 370 PVLPIVSSLPGTTVSPIRI-PFGRGKGEIIDLPGLSRGDLADYVQDEYKRDLI-MTKRGK 427
Query: 486 PRTYRVKGGQAVHV-GGLMR---LDLDQASVETIYVTVWASPNVSLHLGKIENADEI 538
P + +K GQ++ + GGL+R LDLD + ++ + HL + + A E+
Sbjct: 428 PERHTIKPGQSLLIGGGLIRITPLDLDTIVLAAAFIP------IETHLTRTDKAAEM 478
>gi|444516264|gb|ELV11095.1| hypothetical protein TREES_T100016525 [Tupaia chinensis]
Length = 598
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 148/336 (44%), Gaps = 67/336 (19%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAG-------GAPKLNG--------- 372
+L+++G KVDLLP Q +P R +R R A+AG P+L+
Sbjct: 238 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWNDCARAGLLLAPGHQGPQLSSGEGPGDTEG 295
Query: 373 --------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINT- 417
V L+SA+ G+ L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 296 NSNSSVKSRTVVRDVRLISAKTGYGIEELISSLQRSWRYRGDVYLVGATNAGKSTLFNTL 355
Query: 418 ----FAKKEGVK-VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNR 472
+ +G + + + T +P PG R+G + D + S+ +
Sbjct: 356 LESDYCTAKGAEAIDRATISPWPG------RVGRTFWYTEEQKDESAFVF-DADSLAFDM 408
Query: 473 DEQKMVEI------RKELQPRTYRVKGGQAVH-VGGLMRLDLDQASVETIYVTVWASPNV 525
+ + + ++ R EL P + VK + G+ + + ++ + TV AS +
Sbjct: 409 ENEPVTDVPKPTTKRVELTP--HDVKDAHWFYDTPGITK---ENCGDQSAWFTVVASNAL 463
Query: 526 SLHLGKIENADEIWKNHVGIRL--QPPIGQDRASELGTWKDRKLKVSGTSWDVNGI-DIA 582
+H+ ++ AD +++ H G L P G++R + +K+ D + DI
Sbjct: 464 PVHVTSLDRADAVYQKHAGHTLLQVPTGGEERMAGFPPLVAEDIKLKEGLGDSEAVADIK 523
Query: 583 AAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
+ GW ++ + + L L +T G +T+R PL+
Sbjct: 524 FSSAGWVAVTPRFKDRLRLRGYTPQGTVLTVRPPLL 559
>gi|431893876|gb|ELK03693.1| hypothetical protein PAL_GLEAN10016134 [Pteropus alecto]
Length = 696
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L+ E +V + PRT+ +K G + +G + R+D Q + +
Sbjct: 496 FYDTPGITKENCVLNLLSEKEVNIVLPTHSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 554
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL--QPPIGQDRASELG--TWKDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G L P G++R + +D LK
Sbjct: 555 SAWFTVVASNFLPVHITSLDKADTVYQKHAGHTLLKVPMGGKERMAGFPPLVAEDITLKE 614
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T G +T+R PL+
Sbjct: 615 GLGESEAVADIKFSSAGWVAVTPQFKDRLHLRGYTPQGTVLTVRPPLL 662
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 43/164 (26%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR--------------------AKAGGAP----- 368
+L+++G KVDLLP Q +P L R +R R AG P
Sbjct: 243 QLIVLGNKVDLLP-QDAPGYLQR-LRERLWDDCVRAGLLRPLGPRGPQHSAGDRPLDREE 300
Query: 369 ----------KLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF 418
L V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 301 NSNPSARSRTMLRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTL 360
Query: 419 AK------KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
+ K + + T +P PGTTL +L+ P ++++
Sbjct: 361 LESDYCIAKGAEAIDRATISPWPGTTLNLLKFPICNPTPYRMFE 404
>gi|19113892|ref|NP_592980.1| hypothetical protein SPAC2F7.09c [Schizosaccharomyces pombe 972h-]
gi|1175372|sp|Q09700.1|YA29_SCHPO RecName: Full=Uncharacterized protein C2F7.09c
gi|1052792|emb|CAA90496.1| mitochondrial GTPase related protein (prediected)
[Schizosaccharomyces pombe]
Length = 491
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 16/138 (11%)
Query: 384 VRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK-EGVKVSKLTEAPIPGTTLGI- 441
V LL I L RG+V+V+G N+GKSTL+ T AK+ GV L ++ +PGTT I
Sbjct: 195 VDKLLGRINPLLCSRGHVYVVGEANSGKSTLLKTLAKRGNGVFNELLLDSFLPGTTQAIK 254
Query: 442 ----LRIGGILP--AKAKLYDTPGL------LHPHLMSMRLNRDEQKMVEIRKEL--QPR 487
G ++ ++DTPG L P + + L K K+L +P
Sbjct: 255 GYPTQYFGSCFKQLSEGLIFDTPGYRGNLKSLLPWVDTKLLTSLVPKTRSRNKQLTSKPV 314
Query: 488 TYRVKGGQAVHVGGLMRL 505
YRV+ GQ++ +GGL+R+
Sbjct: 315 QYRVRFGQSIILGGLVRV 332
>gi|260889473|ref|ZP_05900736.1| ribosome biogenesis protein GTPase YqeH [Leptotrichia hofstadii
F0254]
gi|260860884|gb|EEX75384.1| ribosome biogenesis protein GTPase YqeH [Leptotrichia hofstadii
F0254]
Length = 283
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 130/288 (45%), Gaps = 33/288 (11%)
Query: 336 VLVGTKVDLLPSQVSPTRLDRWVRHR-AKAGGAPKLNGVYLVSARKDLGVRNLLAFIKEL 394
+++ K+DLLP + PT + WV+ R A+ P + + +SA+ GV ++ IK +
Sbjct: 10 IILINKIDLLPDFIHPTEISNWVKDRLAEEDIVP--DDIAFISAKNKYGVNGIIRKIKNI 67
Query: 395 -AGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILP-AKA 452
+ V+G N GKS++IN +K+T + GTTL I +P ++
Sbjct: 68 FHNKKVRATVLGVSNVGKSSVINLLLGN-----NKITTSKYSGTTLK--SINNKIPNSEI 120
Query: 453 KLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRL-----DL 507
+ DTPGL+ +S ++ + + E+ +T++++ Q R +L
Sbjct: 121 TIIDTPGLIPDGRISDLISVENGLKLVPAGEISRKTFKLEENQVFMFDVFCRFKILGNEL 180
Query: 508 DQASVETIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASELGTWKDRKL 567
++ + I+ + +AS +V H+ + E + + + LQ G K++
Sbjct: 181 LESGSKPIF-SAYASKSVKFHVAREERVEALLNGNYFEILQ-----------GAEKEKYF 228
Query: 568 K---VSGTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLR 612
+ V+ ++ AGLGW ++ +G + L + +++ +R
Sbjct: 229 QNEFVTHEVEIEENEELVIAGLGWINVK-RGPLKVQLEVPENVKVIVR 275
>gi|119472724|ref|XP_001258406.1| hypothetical protein NFIA_058600 [Neosartorya fischeri NRRL 181]
gi|119406558|gb|EAW16509.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 658
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 167/444 (37%), Gaps = 111/444 (25%)
Query: 108 VCPGCGIFMQDKDPNLPGYY-KQKKDIERNEEFLEDEEGIENDIEGFEEDIVDGNFDQSD 166
CPGCG + Q +PN PGYY K +K + + + + + ND + +
Sbjct: 83 CCPGCGAYAQTVEPNEPGYYGKTRKHVRK---LISESQRAAND--------------RPE 125
Query: 167 GKESDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEEL-VERSKKKK 225
G+E +E DL + A + E+ + ++K
Sbjct: 126 GRE------------------------EETDLRSEAEKAASTILKLVDSEVPIPKAKHGA 161
Query: 226 LSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKP 285
+ + + +K + VC RCH L ++ + + + ++ +K
Sbjct: 162 MLQEATTTASHFLEKSRAPAQVCDRCHDLIHHNKAVSVPTPTIYSIQEY--------LKE 213
Query: 286 SGNANAGVVVMVVDCVDF-----DGMFPKRAAKSLFKKLEEAKDDA-KLSKKLPKLVLVG 339
S + + + V+D DF D ++ + + K A + + +KLP + V
Sbjct: 214 SPHRD-NRIYHVIDAADFPMSLVDNIYDALSIQEPRSKNRRASTEKYRWGRKLPTISFVI 272
Query: 340 TKVDLLPS---QV-SPTRLDRWVRHRAKAGGAP--KLNGVYLVSARKDLGVRNLLAFIKE 393
T+ DLL + QV S R V A + +L V+++SA + + + I+E
Sbjct: 273 TRSDLLTATKEQVDSKMEYVRSVLRDALKMSSEEFRLGNVHMISAHRGWWTKQVKEDIRE 332
Query: 394 LAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTE---------------------- 431
G +WV+G N GKS+ I K+ + K+ E
Sbjct: 333 HGG---GIWVVGKANVGKSSFIEACFPKDSRNLEKIAELVDRRAVESDINQLNDVSLGSD 389
Query: 432 -----AP-------------IPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRD 473
AP +PGTT+ +RI K ++ D PGL L++ RD
Sbjct: 390 SILPPAPREDLYPVLPVVSSVPGTTVSPIRI-PFGHGKGEMIDLPGLDRGQLLNH--VRD 446
Query: 474 EQKM-VEIRKELQPRTYRVKGGQA 496
E K + + K +P VK GQ+
Sbjct: 447 EHKRDLTMTKRKKPERLTVKPGQS 470
>gi|344288412|ref|XP_003415944.1| PREDICTED: uncharacterized protein C4orf14-like [Loxodonta
africana]
Length = 700
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
+DTPG+ + + L E +V + PRT+ +K G + +G + R+D Q +
Sbjct: 497 FHDTPGITKENCILNLLTEKEVNVVLPTHSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-H 555
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL--QPPIGQDRASELGTWKDRKLKVS- 570
+ + TV AS + +H+ ++ AD +++ H G L P G++R +E + +
Sbjct: 556 SAWFTVVASNILPVHITSLDRADAVYQKHAGHTLLKVPMGGEERMAEFPPLVAEDITLEE 615
Query: 571 --GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T G +T+R PL+
Sbjct: 616 GLGESEAVADIKFSSAGWVTVTPQFKDRLHLRGYTPQGTVLTVRPPLL 663
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 43/164 (26%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGGAPK------------------- 369
+L+++G KVDLLP R R +R R A+AG P
Sbjct: 243 QLIVLGNKVDLLPQDAPGYR--RRLRERLWNDCARAGLLPPRRYRGPQGPGGDGPGDREE 300
Query: 370 -----------LNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF 418
L V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 301 NPNPSAKPRTVLRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTL 360
Query: 419 AK------KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
+ K + + T + PGTTL +L+ P ++++
Sbjct: 361 LESDYCIAKGAEAIDRATISTWPGTTLNLLKFPICNPTPYRMFE 404
>gi|281352498|gb|EFB28082.1| hypothetical protein PANDA_006562 [Ailuropoda melanoleuca]
Length = 687
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 36/156 (23%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAG-------GAPKLNG--------- 372
+L+++G KVDLLP Q +P L R +R R A+ G P+ +G
Sbjct: 242 QLIVLGNKVDLLP-QDAPGYLQR-LRERLRDDCARVGLLGPCGHQGPQQDGRENSNPPAR 299
Query: 373 -------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK----- 420
V L+SA+ GV L+ ++ RG+V+++GA NAGKSTL NT +
Sbjct: 300 ARTVLRDVRLISAKTGYGVEELITALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCI 359
Query: 421 -KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P +++
Sbjct: 360 AKGAEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 395
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
+DTPG+ + + L E +V + PRT+ +K G + +G + R+D Q + +
Sbjct: 488 FHDTPGITKENCILNLLTEKEVNIVLPTHSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 546
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL--QPPIGQDRASELGTWKDRKLKVS- 570
+ + TV AS + +H+ ++ AD +++ H G L P G++R + + +
Sbjct: 547 SAWFTVVASNLLPVHITSLDRADTVYQKHAGRTLLKVPMGGEERMAGFPPLVGEDITLRE 606
Query: 571 --GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T G +T+R PL+
Sbjct: 607 GLGESEAVADIKFSSAGWVAVTPQFKDRLHLRGYTPQGTVLTVRPPLL 654
>gi|301765480|ref|XP_002918164.1| PREDICTED: uncharacterized protein C4orf14-like [Ailuropoda
melanoleuca]
Length = 688
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 36/156 (23%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAG-------GAPKLNG--------- 372
+L+++G KVDLLP Q +P L R +R R A+ G P+ +G
Sbjct: 242 QLIVLGNKVDLLP-QDAPGYLQR-LRERLRDDCARVGLLGPCGHQGPQQDGRENSNPPAR 299
Query: 373 -------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK----- 420
V L+SA+ GV L+ ++ RG+V+++GA NAGKSTL NT +
Sbjct: 300 ARTVLRDVRLISAKTGYGVEELITALQRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCI 359
Query: 421 -KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P +++
Sbjct: 360 AKGAEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 395
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
+DTPG+ + + L E +V + PRT+ +K G + +G + R+D Q + +
Sbjct: 488 FHDTPGITKENCILNLLTEKEVNIVLPTHSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 546
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRLQ--PPIGQDRASELGTWKDRKLKVS- 570
+ + TV AS + +H+ ++ AD +++ H G L P G++R + + +
Sbjct: 547 SAWFTVVASNLLPVHITSLDRADTVYQKHAGRTLLKVPMGGEERMAGFPPLVGEDITLRE 606
Query: 571 --GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T G +T+R PL+
Sbjct: 607 GLGESEAVADIKFSSAGWVAVTPQFKDRLHLRGYTPQGTVLTVRPPLL 654
>gi|349604286|gb|AEP99881.1| Uncharacterized protein C4orf14-like protein-like protein, partial
[Equus caballus]
Length = 402
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
+DTPG+ + + L E +V + PRT+ +K G + +G + R+D Q S +
Sbjct: 198 FHDTPGITKENCILNLLTEKEVNIVLPTHSIVPRTFVLKPGMVLFLGAIGRIDFLQGS-Q 256
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL--QPPIGQDRASELGTWKDRKLKVS- 570
+ + TV AS + +H+ ++ AD ++ H G L P G++R + + +
Sbjct: 257 SAWFTVVASNFLPVHVTSLDKADTVYHKHAGHTLLKVPMGGEERMAGFPPLVGEDITLEE 316
Query: 571 --GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T G +T+R PL+
Sbjct: 317 GLGESEAVADIKFSSAGWVAVTPHFKDRLRLRGYTPQGTVLTVRPPLL 364
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 370 LNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAK------KEG 423
L V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT + K
Sbjct: 15 LRDVRLISAKTGFGVEELISALRRSWRYRGDVYLVGATNAGKSTLFNTLLESDYCIAKGA 74
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
+ K T +P PGTTL +L+ P +++
Sbjct: 75 EAIDKATISPWPGTTLNLLKFPICNPTPYRMF 106
>gi|430810981|emb|CCJ31504.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 146
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 373 VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEA 432
+ L SA K G+ L+ I + + N+++IG N GKS++I+ FA + G + E
Sbjct: 16 IILTSAVKGWGIEQLITSINKYKAKKSNIYIIGMTNVGKSSIISKFASRVGYE-----ET 70
Query: 433 PIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRT--YR 490
P T+ I R+G + + DTPG+ P + + V + K+ PR +
Sbjct: 71 P----TVNINRLGNLFKNNGVIIDTPGISSPGRQLYKYVDYDNLKVYVPKKRFPRIKPFA 126
Query: 491 VKGGQAVHVGGLMRLD 506
+K GQ + + ++R+D
Sbjct: 127 MKAGQTLIIERIVRID 142
>gi|13358031|ref|NP_078305.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|167971513|ref|ZP_02553790.1| conserved hypothetical protein [Ureaplasma parvum serovar 6 str.
ATCC 27818]
gi|168281672|ref|ZP_02689339.1| GTP-binding protein [Ureaplasma parvum serovar 14 str. ATCC 33697]
gi|168307814|ref|ZP_02690489.1| GTP-binding domain protein [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|170762423|ref|YP_001752553.1| hypothetical protein UPA3_0487 [Ureaplasma parvum serovar 3 str.
ATCC 27815]
gi|11356759|pir||A82887 conserved hypothetical ATP/GTP-binding protein UU468 [imported] -
Ureaplasma urealyticum
gi|6899462|gb|AAF30880.1|AE002143_5 conserved hypothetical ATP/GTP-binding protein [Ureaplasma parvum
serovar 3 str. ATCC 700970]
gi|168828000|gb|ACA33262.1| conserved hypothetical protein [Ureaplasma parvum serovar 3 str.
ATCC 27815]
gi|171902631|gb|EDT48920.1| GTP-binding domain protein [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|182676061|gb|EDT87966.1| GTP-binding protein [Ureaplasma parvum serovar 14 str. ATCC 33697]
gi|186701126|gb|EDU19408.1| conserved hypothetical protein [Ureaplasma parvum serovar 6 str.
ATCC 27818]
Length = 361
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 128/290 (44%), Gaps = 37/290 (12%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
+C RC L +Y +++ +V+ NL + I T N + + V+D +D +
Sbjct: 34 LCQRCFKLIHYNKLE-KVSTNL--NQSIKETINTL------NFSNLQIFAVLDILDLE-- 82
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGG 366
++ +L+E ++ K++ + K+DLLP + + ++ V G
Sbjct: 83 ------HTIIDELKEYQN---------KIIFLVNKIDLLPQRYNSELVNENVVKTLINHG 127
Query: 367 A--PKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGV 424
PK+ +Y VS + ++ ++ +IK + G N GKS+LIN +
Sbjct: 128 FIDPKI--IY-VSTHSNTSLKKVMDYIKNATNKKQKSIFFGKSNVGKSSLINALLALNKI 184
Query: 425 KVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKEL 484
K +KLT + TT+ + +I + ++ D PG+ + + ++ K + I
Sbjct: 185 K-TKLTISSYTNTTINLNKIN---IQEHQILDAPGVCFDENILNYVRDEDNKSIMISYGA 240
Query: 485 QPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIEN 534
+ Y++ QA+ + GL+ + + T T++ S + +H K+EN
Sbjct: 241 KAINYQINPQQALMISGLVGIQYLKGQKTTF--TLYVSSQLDIHRCKLEN 288
>gi|410957583|ref|XP_003985405.1| PREDICTED: nitric oxide-associated protein 1 [Felis catus]
Length = 696
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
+DTPG+ + + L E +V + PRT+ +K G + +G + R+D Q + +
Sbjct: 495 FHDTPGITKENCVLNLLTEKEVNIVLPTHSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 553
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVGIRL--QPPIGQDRASELGTWKDRKLKVS- 570
+ + TV AS + +H+ ++ AD ++K H G L P G++R + + ++
Sbjct: 554 SAWFTVVASSLLPVHITSLDKADTMYKKHAGHTLLKVPMGGEERMAGFPPLVGEDITLNE 613
Query: 571 --GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T G +T+R PL+
Sbjct: 614 GLGESEAVADIKFSSAGWVAVTPQFKDRLHLRGYTPQGTVLTVRPPLL 661
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 41/163 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDR-----W-----------VRHRA------------KAG 365
+L+++G KVDLLP Q +P L R W HR K
Sbjct: 242 QLIVLGNKVDLLP-QDAPGYLQRLRERLWDDCTRAGLLQLSSHRGLQHAGEDGPRDEKEN 300
Query: 366 GAPK------LNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
P L V L+SA+ G+ L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 301 SKPSARVRTVLKDVRLISAKTGYGIEELISVLQRSWRYRGDVYLVGATNAGKSTLFNTLL 360
Query: 420 K------KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
+ K + + T + PGTTL +L+ P ++++
Sbjct: 361 ESDYCIAKGAEAIDRATISSWPGTTLNLLKFPICNPTPYRMFE 403
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,110,450,605
Number of Sequences: 23463169
Number of extensions: 515637968
Number of successful extensions: 1740753
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 3370
Number of HSP's that attempted gapping in prelim test: 1698130
Number of HSP's gapped (non-prelim): 26877
length of query: 666
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 517
effective length of database: 8,863,183,186
effective search space: 4582265707162
effective search space used: 4582265707162
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.4 bits)