BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005977
(666 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54453|YQEH_BACSU Uncharacterized protein YqeH OS=Bacillus subtilis (strain 168)
GN=yqeH PE=1 SV=1
Length = 366
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 190/380 (50%), Gaps = 52/380 (13%)
Query: 244 EVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDF 303
E +C RC L+NY NE+ + + D DF ++ G ++ +VV +VD DF
Sbjct: 32 ENVICQRCFRLKNY----NEIQDVSLTDDDF-----LNILHGIGETDS-LVVKIVDIFDF 81
Query: 304 DGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAK 363
+G S L+ +L P ++LVG K D+LP + RL +W++ AK
Sbjct: 82 NG--------SWINGLQ------RLVGGNP-ILLVGNKADILPKSLKRERLIQWMKREAK 126
Query: 364 AGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEG 423
G ++ V+LVSA + G+R ++ I+ + +V+V+G N GKST IN K+
Sbjct: 127 ELGLKPVD-VFLVSAGRGQGIREVIDAIEHYRNGK-DVYVVGCTNVGKSTFINRIIKEVS 184
Query: 424 VKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKE 483
+ +T + PGTTL + I L + LYDTPG+++ H M+ +N+ + K++ +KE
Sbjct: 185 GEEDIITTSQFPGTTLDAIEIP--LDDGSSLYDTPGIINNHQMAHYVNKKDLKILSPKKE 242
Query: 484 LQPRTYRVKGGQAVHVGGLMRLDLDQASVETIYVTVWASPNVSLHLGKIENADEIWKNHV 543
L+PRT+++ Q ++ GGL R D S E + + +H K+ENAD +++ H
Sbjct: 243 LKPRTFQLNDQQTLYFGGLARFDY--VSGERSPFICYMPNELMIHRTKLENADALYEKHA 300
Query: 544 GIRLQPPIGQDRASELG-------TWKDRKLKVSGTSWDVNGIDIAAAGLGWFSLGLKGE 596
G L PP G+D E T KD+K DI +GLGW ++ +
Sbjct: 301 GELLTPP-GKDEMDEFPELVAHTFTIKDKK------------TDIVFSGLGWVTVH-DAD 346
Query: 597 ASLTLWTYDGIEITLREPLV 616
+T + G+ + +R L+
Sbjct: 347 KKVTAYAPKGVHVFVRRSLI 366
>sp|Q6YPG5|NOS_ORYSJ Putative nitric oxide synthase OS=Oryza sativa subsp. japonica
GN=Os02g0104700 PE=3 SV=1
Length = 547
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 176/364 (48%), Gaps = 56/364 (15%)
Query: 292 GVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSP 351
+++ +VD VDF+G F L +D A + ++LV TKVDLLP
Sbjct: 182 ALIIKLVDIVDFNGSF-----------LARVRDFAGANP----IILVITKVDLLPRDTDL 226
Query: 352 TRLDRWVRHRAKAGGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNA 409
+ WV +A KLN V+L S++ +GV +++ I++ R +V+++G+ N
Sbjct: 227 NCIGDWV---VEAVVKKKLNVLSVHLTSSKSLVGVTGVISEIQQEKKGR-DVYILGSANV 282
Query: 410 GKSTLIN----TFAKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLL 461
GKS I+ T A K+ V + K ++ +PGTTLG ++I L KLYDTPG+
Sbjct: 283 GKSAFISAMLRTMAYKDPVAAAAQKYKPIQSAVPGTTLGPIQIEAFL-GGGKLYDTPGVH 341
Query: 462 HPHLMSMRLNRDEQKMVEIRKELQPRTYRVK------GGQAVHVGGLMRLDLDQASVETI 515
H + ++ D+ + + L+ R + G ++ GGL+R+D+ +A T
Sbjct: 342 LHHRQAAVIHADDLPSLAPQSRLRARCFPANDTDVGLSGNSLFWGGLVRIDVVKALPRT- 400
Query: 516 YVTVWASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASE-LGTWKDRKLKVSGTSW 574
+T + + +++ ADE ++ VG+ L PP G+++A +G R+L++
Sbjct: 401 RLTFYGPKKLKINMVPTTEADEFYEREVGVTLTPPAGKEKAEGWVGLQGVRELQIKYEES 460
Query: 575 DVNGIDIAAAGLGWFS---LGL---------------KGEASLTLWTYDGIEITLREPLV 616
D DIA +GLGW + LG+ GE L + +EI +R PL
Sbjct: 461 DRPACDIAISGLGWVAVEPLGVPSSNPDESAEEEDNESGELHLRVHVPKPVEIFVRPPLP 520
Query: 617 LDRA 620
+ +A
Sbjct: 521 VGKA 524
>sp|Q66GP9|NOA1_ARATH NO-associated protein 1, chloroplastic/mitochondrial OS=Arabidopsis
thaliana GN=NOA1 PE=1 SV=1
Length = 561
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 170/373 (45%), Gaps = 50/373 (13%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGN--ANAGVVVMVVDCVDFD 304
+C RC L ++G + V N V A L + + ++V +VD VDF+
Sbjct: 144 ICGRCQ-LLSHGHMITAVGGNGGYPGGKQFVSADELREKLSHLRHEKALIVKLVDIVDFN 202
Query: 305 GMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKA 364
G F R + L A ++LV TK+DLLP + WV +
Sbjct: 203 GSFLARV-----RDLVGAN----------PIILVITKIDLLPKGTDMNCIGDWV---VEV 244
Query: 365 GGAPKLN--GVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLIN----TF 418
KLN V+L S++ GV + + I++ R +V+++GA N GKS IN T
Sbjct: 245 TMRKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKGR-DVYILGAANVGKSAFINALLKTM 303
Query: 419 AKKEGVKVS----KLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDE 474
A+++ V + K ++ +PGTTLG ++I + + KLYDTPG+ H + ++ D+
Sbjct: 304 AERDPVAAAAQKYKPIQSAVPGTTLGPIQINAFVGGE-KLYDTPGVHLHHRQAAVVHSDD 362
Query: 475 QKMVEIRKELQPRTYRVK---------------GGQAVHVGGLMRLDLDQASVETIYVTV 519
+ + L+ +++ + G GGL+R+D+ +A ET + T
Sbjct: 363 LPALAPQNRLRGQSFDISTLPTQSSSSPKGESLNGYTFFWGGLVRIDILKALPETCF-TF 421
Query: 520 WASPNVSLHLGKIENADEIWKNHVGIRLQPPIGQDRASEL-GTWKDRKLKVSGTSWDVNG 578
+ + +H + A ++ +G+ L PP G+++ E G R L++
Sbjct: 422 YGPKALEIHAVPTKTATAFYEKELGVLLTPPSGKNQMQEWKGLQSHRLLQIEINDAKRPA 481
Query: 579 IDIAAAGLGWFSL 591
D+A +GLGW S+
Sbjct: 482 SDVAISGLGWISI 494
>sp|Q9JJG9|NOA1_MOUSE Nitric oxide-associated protein 1 OS=Mus musculus GN=Noa1 PE=1 SV=1
Length = 693
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + L E V + PRT+ +K G + +GG+ R+D Q + +
Sbjct: 495 FYDTPGITKESCILNLLTEKEINTVLPTHSIIPRTFVLKPGMVLFLGGIARIDFLQGN-Q 553
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG--IRLQPPIGQDRASELGTWKDRKLKVSG 571
+ + TV AS + +H+ ++ AD +++ H G + L P G++R ++ + + G
Sbjct: 554 SAWFTVVASNFLPVHITSLDKADALYEKHAGHELLLVPMGGKERMAQFPPLVAEDITLKG 613
Query: 572 TSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
DI + GW ++ E +L L T +G +T+ P++
Sbjct: 614 GGKFEAVADIKFSSAGWVAVTPYSEGTLHLRGHTPEGTALTVHPPVL 660
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 67/260 (25%)
Query: 238 AQKEKGEV-TVCARCHSLRNYGQ-VKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVV 295
AQ E G TVC RC L ++G+ ++ +V+ + + +++ L +P +V+
Sbjct: 169 AQAEGGPARTVCQRCWLLVHHGRALRLQVSRD-----QYLELVSAALRRP----GPALVL 219
Query: 296 MVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLD 355
+V+ +D K + K +L+++G KVDLLP Q +P L
Sbjct: 220 YMVNLLDLPDALLPDLPKLVGPK---------------QLIVLGNKVDLLP-QDAPGYLK 263
Query: 356 RWVRH------RAKAGGAPKLNG----------------------------VYLVSARKD 381
R + RA AP G V L+SA+
Sbjct: 264 RLRKRLWDDCIRAGLVVAPGHQGPQYPAGDEPLEEIKNQNPSSRSRTVVKDVRLISAKTG 323
Query: 382 LGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF------AKKEGVKVSKLTEAPIP 435
GV +++ ++ RG+V+++G NAGKSTL NT K + + T +P P
Sbjct: 324 YGVEEMISALQRSWRYRGDVYLVGTTNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWP 383
Query: 436 GTTLGILRIGGILPAKAKLY 455
GTTL +L+ P +++
Sbjct: 384 GTTLNLLKFPICNPTPYRMF 403
>sp|Q8NC60|NOA1_HUMAN Nitric oxide-associated protein 1 OS=Homo sapiens GN=NOA1 PE=1 SV=2
Length = 698
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + + PRT+ +K G + +G + R+D Q + +
Sbjct: 494 FYDTPGITKENCILNLLTEKEVNIVLPTQSIVPRTFVLKPGMVLFLGAIGRIDFLQGN-Q 552
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTW--KDRKLKV 569
+ + TV AS + +H+ ++ AD +++ H G LQ P+ G++R + +D LK
Sbjct: 553 SAWFTVVASNILPVHITSLDRADALYQKHAGHTLLQIPMGGKERMAGFPPLVAEDIMLKE 612
Query: 570 S-GTSWDVNGIDIAAAGLGWFSLGLKGEASLTLWTYDGIEITLREPLV 616
G S V I ++AG + K L +T +G +T+R PL+
Sbjct: 613 GLGASEAVADIKFSSAGWVSVTPNFKDRLHLRGYTPEGTVLTVRPPLL 660
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 42/162 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDRWVRHR-----AKAGG--APKLNG-------------- 372
+L+++G KVDLLP Q +P R +R R A+AG AP G
Sbjct: 242 QLIVLGNKVDLLP-QDAPGYRQR-LRERLWEDCARAGLLLAPGHQGPQRPVKDEPQDGEN 299
Query: 373 -------------VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTF- 418
V L+SA+ GV L++ ++ RG+V+++GA NAGKSTL NT
Sbjct: 300 PNPPNWSRTVVRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGATNAGKSTLFNTLL 359
Query: 419 -----AKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLY 455
K + + T +P PGTTL +L+ P +++
Sbjct: 360 ESDYCTAKGSEAIDRATISPWPGTTLNLLKFPICNPTPYRMF 401
>sp|Q32LB9|NOA1_BOVIN Nitric oxide-associated protein 1 OS=Bos taurus GN=NOA1 PE=2 SV=1
Length = 694
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Query: 454 LYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVKGGQAVHVGGLMRLDLDQASVE 513
YDTPG+ + + L E +V + PRT+ +K G + +G L R+D + + +
Sbjct: 495 FYDTPGITKENCILSLLTEKEVNIVLPTHSIIPRTFMLKPGMVLFLGALGRIDFLKGN-Q 553
Query: 514 TIYVTVWASPNVSLHLGKIENADEIWKNHVG-IRLQPPI-GQDRASELGTWKDRKLKVS- 570
+ + TV AS + +H+ ++ AD +++ H G L+ P+ G++R + + +
Sbjct: 554 SAWFTVVASNFLPVHITSLDKADTMYQKHAGHTLLKVPVGGEERMAGFPPLVAEDITLDE 613
Query: 571 --GTSWDVNGIDIAAAGLGWFSLGLKGEASLTL--WTYDGIEITLREPLV 616
G S V I +++A GW ++ + + +LTL +T G +T+R PL+
Sbjct: 614 GLGESEAVADIKLSSA--GWVAVTPQFKDTLTLRGYTPQGTVLTVRRPLL 661
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 41/163 (25%)
Query: 334 KLVLVGTKVDLLPSQVSPTRLDR-------------------WVRHRAKAGGAPK----- 369
+L+++G KVDLLP Q +P R + R + +G P+
Sbjct: 242 QLIVLGNKVDLLP-QDTPNYRQRLRERLWDECIGAGLLPPRGYRRAQRSSGDRPRGGEDN 300
Query: 370 ----------LNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
L V L+SA+ GV L++ ++ RG+V+++G+ NAGKSTL NT
Sbjct: 301 ANLPSKSSTVLRDVRLISAKTGYGVEELISALQRSWRYRGDVYLVGSTNAGKSTLFNTLL 360
Query: 420 K------KEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYD 456
+ K + + T +P PGTTL +L+ P +++
Sbjct: 361 ESDYCIAKGAEAIDRATISPWPGTTLNLLKFPICNPTPYRMFQ 403
>sp|Q09700|YA29_SCHPO Uncharacterized protein C2F7.09c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.09c PE=4 SV=1
Length = 491
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 16/138 (11%)
Query: 384 VRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK-EGVKVSKLTEAPIPGTTLGI- 441
V LL I L RG+V+V+G N+GKSTL+ T AK+ GV L ++ +PGTT I
Sbjct: 195 VDKLLGRINPLLCSRGHVYVVGEANSGKSTLLKTLAKRGNGVFNELLLDSFLPGTTQAIK 254
Query: 442 ----LRIGGILP--AKAKLYDTPGL------LHPHLMSMRLNRDEQKMVEIRKEL--QPR 487
G ++ ++DTPG L P + + L K K+L +P
Sbjct: 255 GYPTQYFGSCFKQLSEGLIFDTPGYRGNLKSLLPWVDTKLLTSLVPKTRSRNKQLTSKPV 314
Query: 488 TYRVKGGQAVHVGGLMRL 505
YRV+ GQ++ +GGL+R+
Sbjct: 315 QYRVRFGQSIILGGLVRV 332
>sp|J9VQ03|NOG2_CRYNH Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=NOG2 PE=3 SV=2
Length = 720
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 40/188 (21%)
Query: 290 NAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQV 349
++ VV+ V+D D G K + L K+ K LV V KVDL+P+ V
Sbjct: 234 SSDVVIHVLDARDPLGTRCKPVVEYLRKE-----------KAHKHLVYVLNKVDLVPTWV 282
Query: 350 SPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELA-----GPRGNVWVI 404
+ RWV+H + + AP + + S G +L+ +++ + + +V I
Sbjct: 283 TA----RWVKHLSLS--APTI--AFHASINNSFGKGSLIQLLRQFSVLHSDKKQISVGFI 334
Query: 405 GAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTT-----------LGILRIGGILPAKAK 453
G N GKS++INT KK+ V APIPG T + ++ GI+P AK
Sbjct: 335 GYPNTGKSSIINTLKKKKVCTV-----APIPGETKVWQYITLMRRIYLIDCPGIVPVSAK 389
Query: 454 LYDTPGLL 461
DT +L
Sbjct: 390 DSDTDTVL 397
>sp|P0CS94|NOG2_CRYNV Nucleolar GTP-binding protein 2 OS=Cryptococcus neoformans var.
grubii GN=NOG2 PE=3 SV=1
Length = 693
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 40/185 (21%)
Query: 293 VVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPT 352
VV+ V+D D G K + L K+ K LV V KVDL+P+ V+
Sbjct: 210 VVIHVLDARDPLGTRCKPVVEYLRKE-----------KAHKHLVYVLNKVDLVPTWVTA- 257
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELA-----GPRGNVWVIGAQ 407
RWV+H + + AP + + S G +L+ +++ + + +V IG
Sbjct: 258 ---RWVKHLSLS--APTI--AFHASINNSFGKGSLIQLLRQFSVLHSDKKQISVGFIGYP 310
Query: 408 NAGKSTLINTFAKKEGVKVSKLTEAPIPGTT-----------LGILRIGGILPAKAKLYD 456
N GKS++INT KK+ V APIPG T + ++ GI+P AK D
Sbjct: 311 NTGKSSIINTLKKKKVCTV-----APIPGETKVWQYITLMRRIYLIDCPGIVPVSAKDSD 365
Query: 457 TPGLL 461
T +L
Sbjct: 366 TDTVL 370
>sp|O14236|NOG2_SCHPO Nucleolar GTP-binding protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nog2 PE=1 SV=1
Length = 537
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKEL 394
++LV KVDL+P+ V+ WV+ AK P + + S G +L+ +++
Sbjct: 250 MILVLNKVDLVPTSVAAA----WVKILAKE--YPTI--AFHASINNSFGKGSLIQILRQF 301
Query: 395 AGPRGN-----VWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILP 449
A + V +IG NAGKS++INT KK+ V APIPG T + L
Sbjct: 302 ASLHSDKKQISVGLIGFPNAGKSSIINTLRKKKVCNV-----APIPGETKVWQYVA--LM 354
Query: 450 AKAKLYDTPGLLHP 463
+ L D PG++ P
Sbjct: 355 KRIFLIDCPGIVPP 368
>sp|Q6FWS1|NOG2_CANGA Nucleolar GTP-binding protein 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=NOG2 PE=3 SV=1
Length = 494
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 35/181 (19%)
Query: 290 NAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPK--LVLVGTKVDLLPS 347
++ VV+ V+D D G + K +EE + K+ P L+ V K DL+P+
Sbjct: 221 SSDVVIHVLDARDPLG--------TRCKSVEEY-----MKKETPHKHLIYVLNKCDLVPT 267
Query: 348 QVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAG-----PRGNVW 402
V+ WV+H +K P L + S G +L+ +++ + + +V
Sbjct: 268 WVAAA----WVKHLSK--DRPTL--AFHASITNSFGKGSLIQLLRQFSQLHTDRKQISVG 319
Query: 403 VIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLH 462
IG N GKS++INT KK+ +V APIPG T I L + L D PG++
Sbjct: 320 FIGYPNTGKSSIINTLRKKKVCQV-----APIPGETKVWQYI--TLMKRIFLIDCPGIVP 372
Query: 463 P 463
P
Sbjct: 373 P 373
>sp|O74791|GRN1_SCHPO GTPase grn1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=grn1 PE=1 SV=1
Length = 470
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 42/193 (21%)
Query: 291 AGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVS 350
+ V++ V+D D +G K + + E K +L+ V K+DL+PS+V
Sbjct: 163 SDVILYVLDARDPEGTRSKDVERQVLASSAEEK----------RLIFVINKIDLVPSEV- 211
Query: 351 PTRLDRWVRH----------RAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRG- 399
L++WV + R+ +G + + SA + NLL +K + +
Sbjct: 212 ---LNKWVTYLRNFFPTIPMRSASGSGN--SNLKHQSASASSTISNLLKSLKSYSAKKKL 266
Query: 400 ----NVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIP-----GTTLGILRIGGILPA 450
V VIG N GKS++IN + S AP P G T + + L
Sbjct: 267 KSSLTVGVIGYPNVGKSSVINALVNRSANGRS----APCPAGNVAGMTTSLREVK--LDN 320
Query: 451 KAKLYDTPGLLHP 463
K +L D+PG++ P
Sbjct: 321 KLRLVDSPGIVFP 333
>sp|P53742|NOG2_YEAST Nucleolar GTP-binding protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NOG2 PE=1 SV=1
Length = 486
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 20/134 (14%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKEL 394
L+ V K DL+P+ V+ WV+H +K P L + S G +L+ +++
Sbjct: 255 LIYVLNKCDLVPTWVAAA----WVKHLSKE--RPTL--AFHASITNSFGKGSLIQLLRQF 306
Query: 395 AG-----PRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILP 449
+ + +V IG N GKS++INT KK+ +V APIPG T I L
Sbjct: 307 SQLHTDRKQISVGFIGYPNTGKSSIINTLRKKKVCQV-----APIPGETKVWQYI--TLM 359
Query: 450 AKAKLYDTPGLLHP 463
+ L D PG++ P
Sbjct: 360 KRIFLIDCPGIVPP 373
>sp|Q6CSP9|NOG2_KLULA Nucleolar GTP-binding protein 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=NOG2 PE=3 SV=1
Length = 513
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 20/134 (14%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKEL 394
L+ V K DL+P+ V+ WV+H +K P L + S G +L+ +++
Sbjct: 254 LIYVLNKCDLVPTWVAAA----WVKHLSKE--RPTL--AFHASITNSFGKGSLIQLLRQF 305
Query: 395 AG-----PRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILP 449
+ + +V IG N GKS++INT KK+ +V APIPG T I L
Sbjct: 306 SQLHKDRHQISVGFIGYPNTGKSSIINTLRKKKVCQV-----APIPGETKVWQYI--TLM 358
Query: 450 AKAKLYDTPGLLHP 463
+ L D PG++ P
Sbjct: 359 KRIFLIDCPGIVPP 372
>sp|Q6C036|NOG2_YARLI Nucleolar GTP-binding protein 2 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=NOG2 PE=3 SV=1
Length = 509
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKEL 394
L+ V K DL+P+ V+ WV+H ++ P L + S G +L+ +++
Sbjct: 247 LIFVLNKCDLVPTWVAAA----WVKHLSQ--DYPTL--AFHASITNSFGKGSLIQLLRQY 298
Query: 395 AG-----PRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILP 449
+ + +V IG N GKS++INT KK+ K APIPG T I L
Sbjct: 299 SALHPDRQQISVGFIGYPNTGKSSIINTLRKKKVCKT-----APIPGETKVWQYI--TLM 351
Query: 450 AKAKLYDTPGLLHP 463
+ L D PG++ P
Sbjct: 352 KRIFLIDCPGIVPP 365
>sp|Q6TGJ8|NOG2_CRYGA Nucleolar GTP-binding protein 2 OS=Cryptococcus gattii GN=NOG2 PE=3
SV=1
Length = 731
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 44/196 (22%)
Query: 290 NAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQV 349
++ VV+ V+D D G K + L K+ K LV V KVDL+P+ V
Sbjct: 232 SSDVVIHVLDARDPLGTRCKPVVEYLRKE-----------KAHKHLVYVLNKVDLVPTWV 280
Query: 350 SPTRLD--------RWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELA-----G 396
+ RWV+H + + AP + + S G +L+ +++ +
Sbjct: 281 TSGPYAYAYANGPARWVKHLSLS--APTI--AFHASINNSFGKGSLIQLLRQFSVLHSDK 336
Query: 397 PRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTT-----------LGILRIG 445
+ +V IG N GKS++INT KK+ V APIPG T + ++
Sbjct: 337 KQISVGFIGYPNTGKSSIINTLKKKKVCTV-----APIPGETKVWQYITLMRRIYLIDCP 391
Query: 446 GILPAKAKLYDTPGLL 461
GI+P AK DT +L
Sbjct: 392 GIVPVSAKDSDTDTVL 407
>sp|Q75DA4|NOG2_ASHGO Nucleolar GTP-binding protein 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NOG2
PE=3 SV=1
Length = 502
Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 35/181 (19%)
Query: 290 NAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPK--LVLVGTKVDLLPS 347
++ VV+ V+D D G + K +EE + K+ P L+ V K DL+P+
Sbjct: 220 SSDVVIHVLDARDPLG--------TRCKSVEEY-----MKKETPHKHLIYVLNKCDLVPT 266
Query: 348 QVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAG-----PRGNVW 402
++ WV+H +K P L + S G +L+ +++ + + +V
Sbjct: 267 WLAAA----WVKHLSK--DRPTL--AFHASITNSFGKGSLIQLLRQFSQLHKDRQQISVG 318
Query: 403 VIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLH 462
IG N GKS++INT KK+ +V APIPG T I L + L D PG++
Sbjct: 319 FIGYPNTGKSSIINTLRKKKVCQV-----APIPGETKVWQYI--TLMKRIFLIDCPGIVP 371
Query: 463 P 463
P
Sbjct: 372 P 372
>sp|Q8G1P9|ERA_BRUSU GTPase Era OS=Brucella suis biovar 1 (strain 1330) GN=era PE=3 SV=1
Length = 311
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 399 GNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGIL---PAKAKLY 455
G V +IGA NAGKSTL+N G KVS +T TT ++R GI PA+ L
Sbjct: 20 GFVALIGAPNAGKSTLVNQLV---GTKVSIVTHK--VQTTRALVR--GIFIEGPAQIVLV 72
Query: 456 DTPGLLHPHLMSMRLNR 472
DTPG+ P RL+R
Sbjct: 73 DTPGIFRP---KRRLDR 86
>sp|Q8YG75|ERA_BRUME GTPase Era OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=era PE=3 SV=1
Length = 311
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 399 GNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGIL---PAKAKLY 455
G V +IGA NAGKSTL+N G KVS +T TT ++R GI PA+ L
Sbjct: 20 GFVALIGAPNAGKSTLVNQLV---GTKVSIVTHK--VQTTRALVR--GIFIEGPAQIVLV 72
Query: 456 DTPGLLHPHLMSMRLNR 472
DTPG+ P RL+R
Sbjct: 73 DTPGIFRP---KRRLDR 86
>sp|Q58859|Y1464_METJA Uncharacterized GTP-binding protein MJ1464 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1464 PE=3 SV=1
Length = 373
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 23/132 (17%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIK-- 392
L+ V K DL+P + L++W + G N V+ VSA++ LG + L IK
Sbjct: 55 LIYVLNKADLVPKDI----LEKW----KEVFGE---NTVF-VSAKRRLGTKILREMIKQS 102
Query: 393 --ELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPA 450
E+ G V ++G N GKS++IN K K + G T G + L
Sbjct: 103 LKEMGKKEGKVGIVGYPNVGKSSIINALTGKR-----KALTGSVAGLTKGEQWVR--LTK 155
Query: 451 KAKLYDTPGLLH 462
KL DTPG+L
Sbjct: 156 NIKLMDTPGVLE 167
>sp|A8I264|MNME_AZOC5 tRNA modification GTPase MnmE OS=Azorhizobium caulinodans (strain
ATCC 43989 / DSM 5975 / ORS 571) GN=mnmE PE=3 SV=1
Length = 435
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 362 AKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKK 421
A+A A + A D G R FI +AGP NAGKSTL+N A +
Sbjct: 192 ARAEAAALCTELTTALADADRGERVRDGFIIAIAGP---------PNAGKSTLLNRLAGR 242
Query: 422 EGVKVSKLTEAPIPGTTLGILRIGGILPAKA-KLYDTPGL 460
E VS P+PGTT +L + L +A L DT GL
Sbjct: 243 EAAIVS-----PVPGTTRDVLEVHLHLAGQAVTLVDTAGL 277
>sp|A4WVZ0|MNME_RHOS5 tRNA modification GTPase MnmE OS=Rhodobacter sphaeroides (strain
ATCC 17025 / ATH 2.4.3) GN=mnmE PE=3 SV=1
Length = 428
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 12/69 (17%)
Query: 400 NVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRI----GGILPAKAKLY 455
V +IGA NAGKSTL+N A++E S+ + GTT ++ + GG+ L
Sbjct: 214 EVAIIGAPNAGKSTLLNALAQREAAITSE-----VAGTTRDVIEVRMNLGGL---AVTLL 265
Query: 456 DTPGLLHPH 464
DT GL H
Sbjct: 266 DTAGLRETH 274
>sp|A8F732|MNME_THELT tRNA modification GTPase MnmE OS=Thermotoga lettingae (strain ATCC
BAA-301 / DSM 14385 / TMO) GN=mnmE PE=3 SV=1
Length = 450
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 12/68 (17%)
Query: 401 VWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGI----LRIGGILPAKAKLYD 456
V +IG N GKSTL+NT K+E V+ IPGTT + L I GI L D
Sbjct: 216 VVIIGKPNVGKSTLLNTLVKEERAIVTD-----IPGTTRDLIEVPLMINGI---SFTLID 267
Query: 457 TPGLLHPH 464
T G+ H H
Sbjct: 268 TAGIRHSH 275
>sp|Q9C3Z4|NOG2_PNECA Nucleolar GTP-binding protein 2 OS=Pneumocystis carinii GN=NOG2
PE=2 SV=1
Length = 483
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 24/137 (17%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKEL 394
++L+ K DL+P+ + W++ +K P L + S G +L+ +++
Sbjct: 232 MILLLNKCDLIPTWCT----REWIKQLSKE--YPTL--AFHASINNPFGKGSLIQLLRQF 283
Query: 395 AGPRGN-----VWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILP 449
+ N V IG N GKS++INT K+ APIPG T ++ +
Sbjct: 284 SKLHSNRRQISVGFIGYPNTGKSSVINTLRSKKVCNT-----APIPGET----KVWQYVR 334
Query: 450 AKAKLY--DTPGLLHPH 464
+K++ D PG++ P+
Sbjct: 335 MTSKIFMIDCPGIVPPN 351
>sp|A5G169|MNME_ACICJ tRNA modification GTPase MnmE OS=Acidiphilium cryptum (strain JF-5)
GN=mnmE PE=3 SV=1
Length = 433
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 12/65 (18%)
Query: 400 NVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTT---LGI-LRIGGILPAKAKLY 455
+ V+GA NAGKSTL+N A +E VS IPGTT +G+ L +GG+ +L
Sbjct: 218 EIVVLGAPNAGKSTLVNALAGEEVAIVSD-----IPGTTRDAIGVRLDLGGV---PVRLV 269
Query: 456 DTPGL 460
DT GL
Sbjct: 270 DTAGL 274
>sp|Q29AU5|MTG1_DROPS Mitochondrial GTPase 1 OS=Drosophila pseudoobscura pseudoobscura
GN=GA14342 PE=3 SV=2
Length = 320
Score = 41.2 bits (95), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 31/156 (19%)
Query: 336 VLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSAR--KDLGVRNLLAFIKE 393
+LV KVDLL + + L + R + P+L + + + ++ GV ++L +
Sbjct: 74 ILVLNKVDLLGPKQQRSVLQQLRRQQ------PELKNILFTNCKDQRNHGVLDILPLATQ 127
Query: 394 LAG----------PRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILR 443
L G N+ +IG N GKS++IN V + K + A + G G+ R
Sbjct: 128 LVGDSSRYNRAQSAEHNIMIIGVPNVGKSSIINVL---RNVHLKKRSAARV-GAEAGVTR 183
Query: 444 IGG---ILPAKAKLY--DTPGLLHPHL----MSMRL 470
G + K +Y DTPG+L P + M M+L
Sbjct: 184 AVGERIKIQEKPAVYMIDTPGILQPSVTDDEMGMKL 219
>sp|C4QZZ7|GEP3_PICPG Genetic interactor of prohibitins 3, mitochondrial OS=Komagataella
pastoris (strain GS115 / ATCC 20864) GN=GEP3 PE=3 SV=1
Length = 576
Score = 41.2 bits (95), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 43/186 (23%)
Query: 247 VCARCHSLRNYGQVKNEVAENLIPDFDFDRVIATRLMKPSGNANAGVVVMVVDCVDFDGM 306
VC RC +NY + + + E D + PS NAN +V V+ VDF
Sbjct: 138 VCQRCFKSQNYSLIDHSIREENPEHKILDEI-------PS-NAN---IVHVLSAVDF--- 183
Query: 307 FPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLL-PSQVSPTRL------DRWVR 359
P +K L + + + + V TK D+ P ++ R D V+
Sbjct: 184 -PLGLSKELVNRFKPTQ-----------ITYVITKSDVFFPDKLGLQRTGAAYFEDSLVK 231
Query: 360 HRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFA 419
G P+ V LVS +++ G++ LL+ + PRG + +G N GKSTLI +
Sbjct: 232 L---VGADPR--KVVLVSGKRNWGLKQLLSTL-----PRGPNYFLGMTNTGKSTLIRSIV 281
Query: 420 KKEGVK 425
K+ K
Sbjct: 282 GKDYSK 287
>sp|A3GEW8|GEP3_PICST Genetic interactor of prohibitins 3, mitochondrial
OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=GEP3 PE=3 SV=2
Length = 676
Score = 40.8 bits (94), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 97/477 (20%), Positives = 175/477 (36%), Gaps = 128/477 (26%)
Query: 107 PVCPGCGIFMQDKDPNLPGYY--KQKKDIERNEEFLEDEEGI----ENDIEGFEED-IVD 159
P C CG+ +Q DP PGYY ++ K +R F++ E+ + ND+ ++ +++
Sbjct: 39 PTCKSCGVRLQSSDPKGPGYYILEESKPAKR---FVKSEDQVFAKYVNDLSLEDKKLLIN 95
Query: 160 GNFDQSDGKESDSGDGDVFDDWDSDEWEAKFLGEDEDDLDLDGFTPAGVGYGNITEELVE 219
+ + ES S D+ ++ D D LG + E+ +
Sbjct: 96 EDSKKVSDSESRSESQDLSNEADIDSSLVNSLGNKD----------------YYASEIKK 139
Query: 220 RSKKKKLSKAERKKKAREAQKEKGEVTVCARCHSLRNYGQVKNEVAENLIPDFDFDRVIA 279
S+K K E+ + E C RC KN ++ P D +++
Sbjct: 140 VSQKDKFKLEEKYNDSVE----------CVRCRDATYRSNFKN-FSQQEYPLELLDNIMS 188
Query: 280 TRLMKPSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVG 339
+ P +V +V+ DF S+ K+ + + +L + K L+
Sbjct: 189 R--IPPHEQ-----IVYIVNAQDF--------PMSINPKIFQYRSSNELKFIVNKADLLF 233
Query: 340 TKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRG 399
++ L T ++ H+ + PK N V +VS +L F+ +
Sbjct: 234 KSIN-LSKNYGQTFFSDYLFHKYR---VPKEN-VMVVSGTNYWDFDKVLDFVDD------ 282
Query: 400 NVWVIGAQNAGKSTLI--------------NTFAKKEGVKVSKLTE-------------- 431
N ++IG N GKST+I + +E K+ K +
Sbjct: 283 NSYLIGNVNCGKSTIIKGMLYTIDKSNKRKKFMSSRERTKMEKEQDMLINRASRMKAMTA 342
Query: 432 ----------------------APIPGTTLGILRIGGILPAKAKLYDTPG-------LLH 462
+ IPG T G ++I + +YD PG L+H
Sbjct: 343 GEKKKEKKRYEMLFRSKVGPGVSHIPGFTRGFIQI-DLEDMDKTIYDVPGFVNSENQLIH 401
Query: 463 PH-----LMSMRLNRDEQKMVEI--RKELQPRTYRVKGGQAVHVGGLMRLDLDQASV 512
H + S ++ + K V++ + + KGGQ++ +GGL L+ Q S+
Sbjct: 402 HHDIYNKISSPKILKQIHKGVKVYDKGTYTSKYITAKGGQSLTIGGLFFLNFPQKSM 458
>sp|B3DXK2|DER_METI4 GTPase Der OS=Methylacidiphilum infernorum (isolate V4) GN=der PE=3
SV=2
Length = 460
Score = 40.4 bits (93), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 71/176 (40%), Gaps = 38/176 (21%)
Query: 312 AKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLN 371
AKSLF ++ A ++A L +V + LLP + R +H+A KL+
Sbjct: 68 AKSLFDQISMAVEEAH-----HILFVVDGRTGLLPLDKQIAKFLRE-KHKAVTVVVNKLD 121
Query: 372 G-----------------VYLVSARKDLGVRNLLAFIKELAG---------PRGNVWVIG 405
++ VSA +LG+ LL I L P + VIG
Sbjct: 122 HPGMEHFCAEFANLGFEEIFAVSAAHNLGINQLLEKIFSLGAEERENPIFAPSTRIAVIG 181
Query: 406 AQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIG-GILPAKAKLYDTPGL 460
NAGKS+LIN+ + S+L PGTT + +G + DT GL
Sbjct: 182 QPNAGKSSLINSL-----IGESRLVVHEEPGTTHDAVEVGIEVCGVPFTFIDTAGL 232
>sp|B3PS53|MNME_RHIE6 tRNA modification GTPase MnmE OS=Rhizobium etli (strain CIAT 652)
GN=mnmE PE=3 SV=1
Length = 439
Score = 40.0 bits (92), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 12/64 (18%)
Query: 401 VWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILR----IGGILPAKAKLYD 456
V + GA NAGKS+L+N AK+E V+ +T+ I GTT +L I G L KLYD
Sbjct: 221 VVIAGAPNAGKSSLMNALAKRE---VAIVTD--IAGTTRDVLHVDLDIDGYL---VKLYD 272
Query: 457 TPGL 460
T GL
Sbjct: 273 TAGL 276
>sp|Q3A0G9|RSGA_PELCD Putative ribosome biogenesis GTPase RsgA OS=Pelobacter carbinolicus
(strain DSM 2380 / Gra Bd 1) GN=rsgA PE=3 SV=1
Length = 364
Score = 40.0 bits (92), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 347 SQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGA 406
S + P R + A G P V + SA+ G+ L + +K AG + +IG+
Sbjct: 156 SDICPETQARRAEIESIAFGTP----VLVTSAQCGDGLDELASHLK--AG--STLVLIGS 207
Query: 407 QNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHPHL 465
AGKSTL+N A E + S+++ A G R LP A + DTPGL HL
Sbjct: 208 SGAGKSTLLNRLACAEHQQTSEISAAVGKGMHTTTHRELFPLPGGALVIDTPGLRELHL 266
>sp|P40010|NUG1_YEAST Nuclear GTP-binding protein NUG1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NUG1 PE=1 SV=1
Length = 520
Score = 40.0 bits (92), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 29/158 (18%)
Query: 324 DDAKLSKKLPKLVLVGTKVDLLPSQVSPTRLDRWVRH----------RAKAGGAPKLNGV 373
++A L + +L+L+ KVDL+P V L++W+ + RA +G +NG
Sbjct: 197 EEAVLQSQGKRLILILNKVDLIPPHV----LEQWLNYLKSSFPTIPLRASSGA---VNGT 249
Query: 374 YLVSARKDLGVRNLLAFIKELAGPRGN--------VWVIGAQNAGKSTLINTFAKKEGVK 425
RK A ++ L N V VIG N GKS++IN + G +
Sbjct: 250 SF--NRKLSQTTTASALLESLKTYSNNSNLKRSIVVGVIGYPNVGKSSVINALLARRGGQ 307
Query: 426 VSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLHP 463
G T + I + K K+ D+PG+ P
Sbjct: 308 SKACPVGNEAGVTTSLREIK--IDNKLKILDSPGICFP 343
>sp|A2BNY4|MNME_PROMS tRNA modification GTPase MnmE OS=Prochlorococcus marinus (strain
AS9601) GN=mnmE PE=3 SV=1
Length = 460
Score = 39.7 bits (91), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 401 VWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIG-GILPAKAKLYDTPG 459
+ +IG N GKS+L+N AKKE V+ IPGTT ++ + I K+ DT G
Sbjct: 230 IALIGKTNVGKSSLLNLLAKKEKAIVTN-----IPGTTRDVIEVNLTINDIPMKIIDTAG 284
Query: 460 LLHPH 464
+ H
Sbjct: 285 IRETH 289
>sp|Q31CZ2|MNME_PROM9 tRNA modification GTPase MnmE OS=Prochlorococcus marinus (strain
MIT 9312) GN=mnmE PE=3 SV=1
Length = 460
Score = 39.7 bits (91), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 401 VWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIG-GILPAKAKLYDTPG 459
+ +IG N GKS+L+N AKKE V+ IPGTT ++ + I K+ DT G
Sbjct: 230 IALIGKTNVGKSSLLNLLAKKEKAIVTN-----IPGTTRDVIEVNLTINDIPMKIIDTAG 284
Query: 460 LLHPH 464
+ H
Sbjct: 285 IRETH 289
>sp|Q7SHR8|NOG2_NEUCR Nucleolar GTP-binding protein 2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=nog-2 PE=3 SV=1
Length = 619
Score = 39.7 bits (91), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 37/181 (20%)
Query: 335 LVLVGTKVDLLPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKEL 394
L+ V K+DL+PS+ + W+R K + S + G +L+ +++
Sbjct: 265 LIFVLNKIDLVPSKTAAA----WIRVLQKDHPTCAMRS----SIKNPFGRGSLIDLLRQF 316
Query: 395 A-----GPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTT----------- 438
+ + +V ++G N GKS++IN K KV APIPG T
Sbjct: 317 SILHKDRKQISVGLVGYPNVGKSSIINALRGKPVAKV-----APIPGETKVWQYVTLMRR 371
Query: 439 LGILRIGGILPAKAKLYDTPG--LLHPHLMSMRLNRDEQKMVEIRKELQP----RTYRVK 492
+ ++ GI+P DTP LL + ++ EQ + + +++P RTY +K
Sbjct: 372 IYLIDCPGIVPPNQN--DTPQDLLLRGVVRVENVDNPEQYIPAVLNKVKPHHMERTYELK 429
Query: 493 G 493
G
Sbjct: 430 G 430
>sp|Q0IE58|RSGA_SYNS3 Putative ribosome biogenesis GTPase RsgA OS=Synechococcus sp.
(strain CC9311) GN=rsgA PE=3 SV=1
Length = 304
Score = 39.3 bits (90), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 83/195 (42%), Gaps = 54/195 (27%)
Query: 285 PSGNANAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDL 344
P NA+ VV + VD FD P +A++ L A+ + +LVL TK DL
Sbjct: 85 PVANASTVVVALAVDQPAFD---PDQASRFLLT--------AERTSLAVQLVL--TKTDL 131
Query: 345 LPSQVSPTRLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKE-----LAGPRG 399
L P L+R +R R +A G P L LVS LG+ L + E L GP G
Sbjct: 132 L----EPEALER-LRVRLQAWGYPPL----LVSTFSGLGLSELKQRLAESSLSVLCGPSG 182
Query: 400 NVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIG---------GILPA 450
GKS+L+N + +++ G+ G L+ G L A
Sbjct: 183 ---------VGKSSLLNALIPELDLRI---------GSVSGRLQRGRHTTRHVELHHLGA 224
Query: 451 KAKLYDTPGLLHPHL 465
KA++ DTPG P L
Sbjct: 225 KARVADTPGFNRPDL 239
>sp|Q8MT06|GNL3_DROME Guanine nucleotide-binding protein-like 3 homolog OS=Drosophila
melanogaster GN=ns1 PE=1 SV=2
Length = 581
Score = 39.3 bits (90), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 46/196 (23%)
Query: 290 NAGVVVMVVDCVDFDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDLLPSQV 349
NA VV+ VVD D G + ++E A A +K+L VLV K DL+P +
Sbjct: 150 NADVVLEVVDARDPLG--------TRCNEVERAVRGAPGNKRL---VLVLNKADLVPRE- 197
Query: 350 SPTRLDRWVRHRAKAG----------------GAPKLNGVYLVSARKD---LGVRNLLAF 390
L+ W+++ ++G G KL + A + +G L++
Sbjct: 198 ---NLNNWIKYFRRSGPVTAFKASTQDQANRLGRRKLREMKTEKAMQGSVCIGAELLMSM 254
Query: 391 IKELAGPRG-----NVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIG 445
+ +G V V+G N GKS++IN+ + V PG T + +
Sbjct: 255 LGNYCRNKGIKTSIRVGVVGIPNVGKSSIINSLTRGRSCMV-----GSTPGVTKSMQEVE 309
Query: 446 GILPAKAKLYDTPGLL 461
L +K KL D PG++
Sbjct: 310 --LDSKIKLIDCPGIV 323
>sp|Q824F3|OBG_CHLCV GTPase obg OS=Chlamydophila caviae (strain GPIC) GN=obg PE=3 SV=1
Length = 335
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 400 NVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTP 458
++ ++G NAGKSTL NT AK E VKV P TTL + G++P + KLY P
Sbjct: 160 DIGLVGFPNAGKSTLFNTLAKTE-VKV-----GAYPFTTLQ--PVLGLVPCREKLYQKP 210
>sp|Q2K2S0|MNME_RHIEC tRNA modification GTPase MnmE OS=Rhizobium etli (strain CFN 42 /
ATCC 51251) GN=mnmE PE=3 SV=2
Length = 437
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 12/86 (13%)
Query: 379 RKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTT 438
R D+G+ A E+ V + GA NAGKS+L+N A+++ V+ +T+ I GTT
Sbjct: 197 RDDIGLHLKSASAGEIIRDGFKVVIAGAPNAGKSSLLNALARRD---VAIVTD--IAGTT 251
Query: 439 LGILR----IGGILPAKAKLYDTPGL 460
+L+ I G L KLYDT GL
Sbjct: 252 RDVLQVDLDIDGYL---VKLYDTAGL 274
>sp|Q54KS4|GNL3_DICDI Guanine nucleotide-binding protein-like 3 homolog OS=Dictyostelium
discoideum GN=gnl3 PE=3 SV=1
Length = 615
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 33/152 (21%)
Query: 334 KLVLVGTKVDLLPSQ-----------VSPT-----RLDRWVRHRAKAGG-APKLNGVYLV 376
K+VL+ K+DL+P + PT + R+ + GG P+L ++
Sbjct: 177 KIVLILNKIDLVPRENVLMWLKYLRNFYPTLAFKCSTQQQKRNLGQQGGIQPELASNDML 236
Query: 377 SARKDLGVRNLLAFIKELAGPRG-----NVWVIGAQNAGKSTLINTFAKKEGVKVSKLTE 431
++ + LG LL +K + V +IG N GKS+LIN+ + V V
Sbjct: 237 NSTESLGAEQLLQLLKNYSRSLNIKTSVTVGIIGYPNVGKSSLINSLKRTRSVGV----- 291
Query: 432 APIPGTTLGILRIGG--ILPAKAKLYDTPGLL 461
G T G + L KL D+PG++
Sbjct: 292 ----GATPGFTKFAQEVHLDKNVKLLDSPGIV 319
>sp|Q4PS77|MTG1_BOVIN Mitochondrial GTPase 1 OS=Bos taurus GN=MTG1 PE=2 SV=2
Length = 332
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 77/187 (41%), Gaps = 35/187 (18%)
Query: 297 VVDCVD--FDGMFPKRAAKSLFKKLEEAKDDAKLSKKLPKLVLVGTKVDL--LPSQVSPT 352
+VDC+ D P LF++ K P L LV K+DL L Q
Sbjct: 48 LVDCIIEVHDAQIPLSGRNPLFQETLGLK---------PHL-LVLNKMDLADLKEQ---- 93
Query: 353 RLDRWVRHRAKAGGAPKLNGVYLVSARKDLGVRNLLAFIKELAGP-----RGN-----VW 402
+ ++H + G + V + KD V+ ++ + EL G RG +
Sbjct: 94 --QKIIQHLEREG----IKHVVFTNCVKDENVKQVIPTVTELVGSSYRYHRGEHVEYCIM 147
Query: 403 VIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGIL-RIGGILPAKAKLYDTPGLL 461
VIG N GKS+LIN+ ++ K PG T ++ RI L DTPG+L
Sbjct: 148 VIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSRIQVCERPLMFLLDTPGVL 207
Query: 462 HPHLMSM 468
P + S+
Sbjct: 208 APRIPSV 214
>sp|B0UJI9|MNME_METS4 tRNA modification GTPase MnmE OS=Methylobacterium sp. (strain 4-46)
GN=mnmE PE=3 SV=1
Length = 437
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 14/49 (28%)
Query: 390 FIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTT 438
F+ LAGP NAGKSTL+N A++E VS PIPGTT
Sbjct: 219 FVVVLAGP---------PNAGKSTLLNALARREAAIVS-----PIPGTT 253
>sp|B4RD04|MNME_PHEZH tRNA modification GTPase MnmE OS=Phenylobacterium zucineum (strain
HLK1) GN=mnmE PE=3 SV=1
Length = 445
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 400 NVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPA-KAKLYDTP 458
+ ++GA NAGKSTL+N A +E V+ PGTT ++ + +L K + DT
Sbjct: 215 RIALVGAPNAGKSTLLNALAGREAAIVTA-----TPGTTRDVIEVPMVLAGYKVLMADTA 269
Query: 459 GL 460
GL
Sbjct: 270 GL 271
>sp|B1ZUH7|RSGA_OPITP Putative ribosome biogenesis GTPase RsgA OS=Opitutus terrae (strain
DSM 11246 / PB90-1) GN=rsgA PE=3 SV=1
Length = 367
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 63/153 (41%), Gaps = 15/153 (9%)
Query: 373 VYLVSARKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEA 432
V L +AR D G+ L ++ P V ++G+ AGKSTLIN K+ L+ A
Sbjct: 182 VTLSAARGD-GIAALAPWLV----PGATVALLGSSGAGKSTLINRLLGKQRQDTGPLSHA 236
Query: 433 PIPGTTLGILRIGGILPAKAKLYDTPGLLHPHLMSMRLNRDEQKMVEIRKELQPRTYRVK 492
G R LP A + DTPGL L + DE + E E+ +
Sbjct: 237 MNKGRHTTTHRELLALPGGALVIDTPGLRELQLWGV----DESAVAETFPEVAALAAECR 292
Query: 493 GGQAVHV---GGLMRLDLDQASVETIYVTVWAS 522
H G +R LD +++ T WAS
Sbjct: 293 FPDCTHQREPGCAVRAALDDGTLDP---TRWAS 322
>sp|Q1MA18|MNME_RHIL3 tRNA modification GTPase MnmE OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=mnmE PE=3 SV=1
Length = 439
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 12/86 (13%)
Query: 379 RKDLGVRNLLAFIKELAGPRGNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTT 438
R D+G A E+ V + GA NAGKS+L+N A+++ V+ +TE I GTT
Sbjct: 199 RSDIGDHLAAASAGEIIRDGFKVVIAGAPNAGKSSLLNALARRD---VAIVTE--IAGTT 253
Query: 439 LGILR----IGGILPAKAKLYDTPGL 460
+L+ I G L KL+DT GL
Sbjct: 254 RDVLQVDLDIDGYL---IKLFDTAGL 276
>sp|E0TTS5|RBGA_BACPZ Ribosome biogenesis GTPase A OS=Bacillus subtilis subsp. spizizenii
(strain ATCC 23059 / NRRL B-14472 / W23) GN=rbgA PE=3
SV=1
Length = 282
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 11/72 (15%)
Query: 403 VIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLH 462
+IG N GKSTLIN AKK ++K + P T+ +++G L +L DTPG+L
Sbjct: 125 IIGIPNVGKSTLINRLAKK---NIAKTGDRPGITTSQQWVKVGKEL----ELLDTPGILW 177
Query: 463 P----HLMSMRL 470
P L+ +RL
Sbjct: 178 PKFEDELVGLRL 189
>sp|O31743|RBGA_BACSU Ribosome biogenesis GTPase A OS=Bacillus subtilis (strain 168)
GN=rbgA PE=1 SV=1
Length = 282
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 11/72 (15%)
Query: 403 VIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLH 462
+IG N GKSTLIN AKK ++K + P T+ +++G L +L DTPG+L
Sbjct: 125 IIGIPNVGKSTLINRLAKK---NIAKTGDRPGITTSQQWVKVGKEL----ELLDTPGILW 177
Query: 463 P----HLMSMRL 470
P L+ +RL
Sbjct: 178 PKFEDELVGLRL 189
>sp|Q5L6R9|OBG_CHLAB GTPase obg OS=Chlamydophila abortus (strain S26/3) GN=obg PE=3 SV=1
Length = 335
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Query: 399 GNVWVIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTP 458
++ ++G NAGKSTL NT A+ E VKV P TTL + G++P + KLY P
Sbjct: 159 ADIGLVGFPNAGKSTLFNTLARTE-VKV-----GAYPFTTLQ--PVLGLVPCQEKLYQKP 210
>sp|Q819W8|RBGA_BACCR Ribosome biogenesis GTPase A OS=Bacillus cereus (strain ATCC 14579
/ DSM 31) GN=rbgA PE=3 SV=1
Length = 296
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 403 VIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLH 462
++G N GKSTLIN AKK ++K + P T +++G + +L DTPG+L
Sbjct: 125 IVGIPNVGKSTLINKLAKK---NIAKTGDRPGVTTAQQWIKVG----KEMELLDTPGILW 177
Query: 463 P----HLMSMRL 470
P L+ +RL
Sbjct: 178 PKFEDQLVGLRL 189
>sp|A8FD69|RBGA_BACP2 Ribosome biogenesis GTPase A OS=Bacillus pumilus (strain SAFR-032)
GN=rbgA PE=3 SV=1
Length = 282
Score = 37.7 bits (86), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 403 VIGAQNAGKSTLINTFAKKEGVKVSKLTEAPIPGTTLGILRIGGILPAKAKLYDTPGLLH 462
+IG N GKSTLIN AKK ++K + P T+ +++G + +L DTPG+L
Sbjct: 125 IIGIPNVGKSTLINRLAKKN---IAKTGDRPGITTSQQWVKVG----KEMELLDTPGILW 177
Query: 463 PHL 465
P
Sbjct: 178 PKF 180
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 264,709,985
Number of Sequences: 539616
Number of extensions: 12447252
Number of successful extensions: 46413
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 664
Number of HSP's that attempted gapping in prelim test: 42983
Number of HSP's gapped (non-prelim): 2613
length of query: 666
length of database: 191,569,459
effective HSP length: 124
effective length of query: 542
effective length of database: 124,657,075
effective search space: 67564134650
effective search space used: 67564134650
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)